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src/man/pxvcf2fa.1.in create mode 100644 src/mataid.f create mode 100644 src/my_expokit.f create mode 100644 src/my_matexp.f create mode 100644 src/nj.cpp create mode 100644 src/nj.h create mode 100644 src/node.cpp create mode 100644 src/node.h create mode 100644 src/node_object.h create mode 100644 src/optimize_cont_models_nlopt.cpp create mode 100644 src/optimize_cont_models_nlopt.h create mode 100644 src/optimize_state_reconstructor_nlopt.cpp create mode 100644 src/optimize_state_reconstructor_nlopt.h create mode 100644 src/optimize_state_reconstructor_periods_nlopt.cpp create mode 100644 src/optimize_state_reconstructor_periods_nlopt.h create mode 100644 src/orphan_files/Makefile_delta create mode 100644 src/orphan_files/Makefile_test create mode 100644 src/orphan_files/delta.cpp create mode 100644 src/orphan_files/delta.h create mode 100644 src/orphan_files/distmatrix.cpp create mode 100644 src/orphan_files/main.cpp create mode 100644 src/orphan_files/main_bpseq.cpp create mode 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src/python_trees.py create mode 100644 src/rate_model.cpp create mode 100644 src/rate_model.h create mode 100644 src/recode.cpp create mode 100644 src/recode.h create mode 100644 src/relabel.cpp create mode 100644 src/relabel.h create mode 100644 src/run_tests.py create mode 100644 src/seq_gen.cpp create mode 100644 src/seq_gen.h create mode 100644 src/seq_info.cpp create mode 100644 src/seq_info.h create mode 100644 src/seq_models.cpp create mode 100644 src/seq_models.h create mode 100644 src/seq_reader.cpp create mode 100644 src/seq_reader.h create mode 100644 src/seq_sample.cpp create mode 100644 src/seq_sample.h create mode 100644 src/seq_utils.cpp create mode 100644 src/seq_utils.h create mode 100644 src/sequence.cpp create mode 100644 src/sequence.h create mode 100644 src/sstat.cpp create mode 100644 src/sstat.h create mode 100644 src/state_reconstructor.cpp create mode 100644 src/state_reconstructor.h create mode 100644 src/string_node_object.h create mode 100644 src/superdouble.cpp create mode 100644 src/superdouble.h create mode 100644 src/tgen.cpp create mode 100644 src/tgen.h create mode 100644 src/timer.cpp create mode 100644 src/timer.h create mode 100644 src/tlate.cpp create mode 100644 src/tlate.h create mode 100644 src/tree.cpp create mode 100644 src/tree.h create mode 100644 src/tree_info.cpp create mode 100644 src/tree_info.h create mode 100644 src/tree_reader.cpp create mode 100644 src/tree_reader.h create mode 100644 src/tree_utils.cpp create mode 100644 src/tree_utils.h create mode 100644 src/tscale.cpp create mode 100644 src/tscale.h create mode 100644 src/upgma.cpp create mode 100644 src/upgma.h create mode 100644 src/utils.cpp create mode 100644 src/utils.h create mode 100644 src/vcf_reader.cpp create mode 100644 src/vcf_reader.h create mode 100644 src/vector_node_object.h diff --git a/.github/workflows/build-test.yml b/.github/workflows/build-test.yml new file mode 100644 index 0000000..117ca5d --- /dev/null +++ b/.github/workflows/build-test.yml @@ -0,0 +1,48 @@ +name: Build-N-Test + +on: + push: + branches: master + pull_request: + branches: master + +jobs: + build: + strategy: + matrix: + os: + - ubuntu-latest + - macOS-latest + runs-on: ${{ matrix.os }} + defaults: + run: + working-directory: ./src + steps: + - uses: actions/checkout@v2 + - name: Install brew dependencies + if: runner.os == 'macOS' + run: + brew install nlopt armadillo automake autoconf + - name: Install apt dependencies + if: runner.os == 'Linux' + run: | + sudo apt-get install -y \ + autotools-dev \ + automake \ + libtool \ + liblapack-dev \ + libatlas-cpp-0.6-dev \ + libnlopt0 \ + libnlopt-dev \ + libnlopt-cxx-dev \ + libarmadillo-dev + - name: autoconf + run: autoreconf -fiv + - name: configure + run: ./configure + - name: make + run: make -j + - name: make check + run: make check + - name: make installcheck + run: make installcheck diff --git a/.gitignore b/.gitignore new file mode 100755 index 0000000..874e371 --- /dev/null +++ b/.gitignore @@ -0,0 +1,46 @@ +*~ +*.o +*.d +tags +px* +Makefile +config.h +config.log +config.status +configure +autom4te.cache +.cproject +.project +.DS_Store +.DS_Store? +._* +.metadata +.autotools +.settings +nbproject +phyx.logfile +phyx.log +.idea* +examples_old* +CMakeLists.txt +build +convert_phylip_to_states.py +logo.svg +*.bbl +*.blg +*.synctex.gz +Phyxed_Manual.log +Phyxed_Manual.dvi + +# JayDubyaBee test code +main_JWB.cpp +compile_JWB.sh + +# do not exclude manpage sources +!px*.1.in + +# softwipe +softwipe_* +*.tmp +compile_commands.json + diff --git a/LICENSE b/LICENSE new file mode 100755 index 0000000..10926e8 --- /dev/null +++ b/LICENSE @@ -0,0 +1,675 @@ + GNU GENERAL PUBLIC LICENSE + Version 3, 29 June 2007 + + Copyright (C) 2007 Free Software Foundation, Inc. + Everyone is permitted to copy and distribute verbatim copies + of this license document, but changing it is not allowed. + + Preamble + + The GNU General Public License is a free, copyleft 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If not, see . + +Also add information on how to contact you by electronic and paper mail. + + If the program does terminal interaction, make it output a short +notice like this when it starts in an interactive mode: + + Copyright (C) + This program comes with ABSOLUTELY NO WARRANTY; for details type `show w'. + This is free software, and you are welcome to redistribute it + under certain conditions; type `show c' for details. + +The hypothetical commands `show w' and `show c' should show the appropriate +parts of the General Public License. Of course, your program's commands +might be different; for a GUI interface, you would use an "about box". + + You should also get your employer (if you work as a programmer) or school, +if any, to sign a "copyright disclaimer" for the program, if necessary. +For more information on this, and how to apply and follow the GNU GPL, see +. + + The GNU General Public License does not permit incorporating your program +into proprietary programs. If your program is a subroutine library, you +may consider it more useful to permit linking proprietary applications with +the library. If this is what you want to do, use the GNU Lesser General +Public License instead of this License. But first, please read +. + diff --git a/README.md b/README.md new file mode 100755 index 0000000..6f248c5 --- /dev/null +++ b/README.md @@ -0,0 +1,214 @@ +[![Build-N-Test](https://github.com/FePhyFoFum/phyx/actions/workflows/build-test.yml/badge.svg)](https://github.com/FePhyFoFum/phyx/actions/workflows/build-test.yml) + +phyx logo + +--- + +**_Note_** Phyx recently overwent an overhaul such that a simple `git pull && git make` will fail. Instead, see instructions [here](#problems-after-updating-git-pull). + +--- + +**phyx** performs phylogenetics analyses on trees and sequences. See installation instructions for Linux and Mac including any dependencies on the wiki [here](https://github.com/FePhyFoFum/phyx/wiki/Installation) or below. + +Authors: Joseph W. Brown\*, Joseph F. Walker\*, and Stephen A. Smith (\* equal contribution) + +Citation: [Brown, J. W., J. F. Walker, and S. A. Smith; Phyx: phylogenetic tools for unix. Bioinformatics 2017; 33 (12): 1886-1888. doi: 10.1093/bioinformatics/btx063](https://academic.oup.com/bioinformatics/article/33/12/1886/2975328/Phyx-phylogenetic-tools-for-unix) + +License: GPL https://www.gnu.org/licenses/gpl-3.0.html + +Some of the sequence comparison operations use the very nice [edlib library](https://github.com/Martinsos/edlib#alignment-methods). These are reported in this publication: [Martin Šošić, Mile Šikić; Edlib: a C/C ++ library for fast, exact sequence alignment using edit distance. Bioinformatics 2017 btw753. doi: 10.1093/bioinformatics/btw753](https://academic.oup.com/bioinformatics/article/33/9/1394/2964763/Edlib-a-C-C-library-for-fast-exact-sequence). + +## Documentation +Documentation resides in several locations (all slightly out of date, alas). A [pdf manual](https://github.com/FePhyFoFum/phyx/tree/master/doc) is available in the `doc/` directory. A slightly-less-out-of-date list of the current programs with examples can be found [on the wiki](https://github.com/FePhyFoFum/phyx/wiki/Program-list). Help for individual programs can be obtained with either `PROGRAM -h` or (if installed, see below) `man PROGRAM`. See a brief overview [here](https://twitter.com/i/moments/1067839564927008769). + +Still, there are a whack of programs, so it can be difficult to remember the name of which program does what. Here is a quick reference: + +Program | Short description +:--- | :--- +pxaa2cdn | produce a codon alignment from and AA alignment and unaligned nucleotides +pxbdfit | diversification model inference +pxbdsim | a birth death simulator +pxboot | sequence alignment resampling (bootstrap or jackknife) +pxbp | prints out bipartitions that make up the tree +pxcat | an alignment concatenator +pxclsq | clean sites based on missing or ambiguous data +pxcltr | general tree cleaner +pxcolt | collapse poorly-supported edges +pxcomp | a composition homogeneity test +pxcomp | compositional homogeneity test +pxconsq | a consensus sequence constructor for an alignment +pxcontrates | a brownian and ou estimator +pxfqfilt | a fastq filter given a mean quality +pxlog | a MCMC log manipulator/concatenator +pxlssq | information about seqs in a file (like ls but for an alignment file) +pxlstr | information about trees in a file (like ls but for a tree file) +pxmono | monophyly tester +pxmrca | information about an mrca +pxmrcacut | a mrca cutter +pxmrcaname | a mrca label maker +pxnj | neighbour-joining tree inference +pxnni | a nni changer +pxnw | needleman-wunsch alignment +pxpoly | a polytomy sampler that generates a binary tree +pxrecode | a sequence alignment recoder +pxrevcomp | a reverse complementor +pxrls | taxon relabelling for sequences +pxrlt | taxon relabelling for trees +pxrmk | remove two-degree nodes from a tree +pxrms | pruning seqs (like rm but for seqs) +pxrmt | pruning trees (like rm but for trees) +pxrr | rerooting and unrooting trees +pxs2fa | convert an alignment to fasta format +pxs2nex | convert an alignment to nexus format +pxs2phy | convert an alignment to phylip format +pxseqgen | Sequence simulation program +pxssort | sequence sorter +pxsstat | multinomial alignment test statistics +pxstrec | a state reconstructor +pxsw | smith waterman alignment +pxt2new | convert a tree to newick format +pxt2nex | convert a tree to vanilla Nexus format +pxtcol | annotate tree to colour edges +pxtcomb | tree combiner +pxtgen | exhaustive tree topology generator +pxtlate | translate nucleotide sequences into amino acids +pxtrt | extract an induced subtree from a larger tree +pxtscale | tree rescaling +pxupgma | upgma tree inference +pxvcf2fa | convert vcf file to fasta alignment + +## Problems after updating (git pull) +If you have been using phyx and things are not working after a recent pull, this is because of a change in configuration. Please do the following in the `src` directory to remedy the situation: + + make distclean + autoreconf -fi + ./configure + make + make check + sudo make install + +# Installation instructions +phyx requires a few dependencies. Since installation of these dependencies differs on [Linux](#linux-install) vs. [Mac OSX](#mac-install), we've separated the instructions below. + +## Mac install +Mac has become increasingly difficult to support at the command line with changes every version on location and standards for compilation tools. First, distribution of compiled programs is very difficult. Furthermore, Mac now defaults to clang as a C/C++ compiler, which does not support OpenMP. For **Mac OSX 10.12**, we have found that you can install with clang using the simple instructions and [homebrew](http://brew.sh/) *or* using a fresh installation of gcc from [here](http://hpc.sourceforge.net/). Instructions for both are below (don't use both, choose one, probably the simple one). For simple instructions click [here](#binary-install-with-homebrew), and for advanced instructions click [here](#install-with-hpc-gcc-advanced-instructions). + +### Binary install with Homebrew + +1. Install the Homebrew package manager: + + /usr/bin/ruby -e "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/master/install)" + +2. Install the Brewsci phyx package: + + brew install brewsci/bio/phyx + +### Build from source with Homebrew + +1. Install the Homebrew package manager: + + /usr/bin/ruby -e "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/master/install)" + +2. Install dependencies from homebrew: + + brew install git cmake nlopt armadillo + +3. On to phyx. First, clone the repository (if you haven't already): + + git clone https://github.com/FePhyFoFum/phyx.git + +4. Install phyx + + cd phyx/src + autoconf + ./configure + make + make check + +If you want to install it so it is available anywhere in your system, do: + + sudo make install + +### Install with HPC GCC (advanced instructions) +1. Install gcc and gfortran. Download gcc-6.2-bin.tar.gz or more recent from http://hpc.sourceforge.net/. Install with: + + sudo tar -xvf gcc-6.2-bin.tar -C / + +2. Install autoconf from http://ftp.gnu.org/gnu/autoconf/. Get autoconf-latest.tar.gz, then: + + tar -xzf autoconf-latest.tar.gz + cd autoconf-2.69 + ./configure --prefix=/usr/local/autoconf-2.69 + make + sudo make install + ln -s autoconf-2.69 /usr/local/autoconf + +3. On to phyx. first, clone the repository (if you haven't already): + + git clone https://github.com/FePhyFoFum/phyx.git + +4. Install cmake and install Armadillo. Get cmake from https://cmake.org/download/. I got https://cmake.org/files/v3.6/cmake-3.6.2-Darwin-x86_64.tar.gz. Get armadillo from the `deps` directory or http://arma.sourceforge.net/download.html, get the stable one. Untar it. Double click the Cmake.app. Click "Browse source..." and choose the armadillo folder that was created after untaring. Click "Browse build..." and choose the same folder as browse source. Click "Configure" and then click "Generate". Go to the terminal and browse to that armadillo folder and type: + + make + sudo make install + +5. Install nlopt. Get armadillo from the `deps` directory or go to http://ab-initio.mit.edu/wiki/index.php/NLopt#Download_and_installation and download the latest (probably nlopt-2.4.2.tar.gz). Untar and browse in the terminal to that directory: + + ./configure --without-octave --without-matlab + make + sudo make install + +6. Compile phyx. Now you can go to the src directory of phyx and type: + + autoconf + ./configure + make + make check + sudo make install + +and all the programs should compile without issue. + + +## Linux install + +These instructions work for most ubuntu versions as well as debian. + +1. Install general dependencies: + + sudo apt-get install git autotools-dev autoconf automake cmake libtool liblapack-dev libatlas-cpp-0.6-dev libnlopt-cxx-dev + +2. Clone the phyx repo (if you haven't already): + + git clone https://github.com/FePhyFoFum/phyx.git + +3. Install armadillo dependency + +**Note**: it is possible to get from apt-get, but need version >= 5.2: + + sudo apt-get install libarmadillo-dev + +On debian it was necessary to use backports: + + sudo apt-get -t jessie-backports install libarmadillo-dev + +If that is not possible, compile the provided code: + + cd phyx/deps + tar -xvzf armadillo-7.400.2.tgz + cd armadillo-7.400.2 + ./configure + make + sudo make install + +4. Finally, install phyx: + + cd phyx/src + autoconf + ./configure + make + make check + +If you want to install it so it is available anywhere in your system, do: + + sudo make install + diff --git a/doc/Phyxed_Manual.aux b/doc/Phyxed_Manual.aux new file mode 100644 index 0000000..3cf0e61 --- /dev/null +++ b/doc/Phyxed_Manual.aux @@ -0,0 +1,69 @@ +\relax +\providecommand\hyper@newdestlabel[2]{} +\providecommand*{\memsetcounter}[2]{} +\providecommand\HyperFirstAtBeginDocument{\AtBeginDocument} +\HyperFirstAtBeginDocument{\ifx\hyper@anchor\@undefined +\global\let\oldcontentsline\contentsline +\gdef\contentsline#1#2#3#4{\oldcontentsline{#1}{#2}{#3}} +\global\let\oldnewlabel\newlabel +\gdef\newlabel#1#2{\newlabelxx{#1}#2} +\gdef\newlabelxx#1#2#3#4#5#6{\oldnewlabel{#1}{{#2}{#3}}} +\AtEndDocument{\ifx\hyper@anchor\@undefined +\let\contentsline\oldcontentsline +\let\newlabel\oldnewlabel +\fi} +\fi} +\global\let\hyper@last\relax +\gdef\HyperFirstAtBeginDocument#1{#1} 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+\@writefile{toc}{\contentsline {subsection}{pxstrec}{9}{section*.36}} +\@writefile{toc}{\contentsline {subsection}{pxsw}{10}{section*.37}} +\@writefile{toc}{\contentsline {subsection}{pxt2new}{10}{section*.38}} +\@writefile{toc}{\contentsline {subsection}{pxtlate}{10}{section*.39}} +\@writefile{toc}{\contentsline {subsection}{pxtscale}{10}{section*.40}} +\@writefile{toc}{\contentsline {subsection}{pxupgma}{10}{section*.41}} +\@writefile{toc}{\contentsline {subsection}{pxvcf2fa}{10}{section*.42}} +\memsetcounter{lastsheet}{10} +\memsetcounter{lastpage}{10} diff --git a/doc/Phyxed_Manual.out b/doc/Phyxed_Manual.out new file mode 100644 index 0000000..d5a249b --- /dev/null +++ b/doc/Phyxed_Manual.out @@ -0,0 +1,3 @@ +\BOOKMARK [1][-]{section*.1}{What is Phyx?}{}% 1 +\BOOKMARK [1][-]{section*.3}{Pheatures of Phyx}{}% 2 +\BOOKMARK [1][-]{section*.7}{Examples}{}% 3 diff --git a/doc/Phyxed_Manual.pdf b/doc/Phyxed_Manual.pdf new file mode 100644 index 0000000..ea7c3b9 Binary files /dev/null and b/doc/Phyxed_Manual.pdf differ diff --git a/doc/Phyxed_Manual.tex b/doc/Phyxed_Manual.tex new file mode 100644 index 0000000..a535456 --- /dev/null +++ b/doc/Phyxed_Manual.tex @@ -0,0 +1,478 @@ +\documentclass[12pt,letterpaper]{memoir} +%\usepackage{longtable} +%\usepackage{fixltx2e} +%\usepackage{textcomp} +\usepackage{fullpage} +%\usepackage{amsfonts} +\usepackage{verbatim} +\usepackage[english]{babel} +%\usepackage{pifont} +\usepackage{color} +%\usepackage{setspace} +%\usepackage[normalem]{ulem} +%\usepackage{natbib} +%\usepackage{float} +%\usepackage{latexsym} +\usepackage{url} +\usepackage{epsfig} +\usepackage{graphicx} +%\usepackage{amssymb} +%\usepackage{amsmath} +%\usepackage{bm} +%\usepackage{array} +%\usepackage{ifthen} +%\usepackage{caption} +\usepackage{hyperref} +%\usepackage{amsthm} +%\usepackage{amstext} +%\usepackage{etoolbox} +%\usepackage{setspace}% http://ctan.org/pkg/setspace + +\linespread{1} +\setcounter{secnumdepth}{0} +\pagenumbering{arabic} + +\begin{document} + +\begin{flushright} +Version dated: \today +\end{flushright} +\noindent{\Large \textbf{Phyx: Phylogenetic tools for Unix}} +\bigskip + +\noindent {\normalsize Joseph W. Brown$^{\dagger}$, Joseph F. Walker$^{\dagger}$, and Stephen A. Smith*}\\ +\noindent {\small +Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan, 48109, USA}\\ +\noindent {\small +$^{\dagger}$Joint first authors.}\\ +\noindent {\small +$^{*}$Corresponding author}\\ + +\medskip +\noindent{Emails:} \href{josephwb@umich.edu}{josephwb@umich.edu}, \href{jfwalker@umich.edu}{jfwalker@umich.edu}, and \href{eebsmith@umich.edu}{eebsmith@umich.edu}.\\ +\medskip + +\section{What is Phyx?}\label{abstract} +Phyx (pronounced ``fix'') is a set of data analysis programs modeled after POSIX-style command-line tools, to help them be easily incorporated in bioinformatic pipelines. The majority of Phyx programs focus on phylogenetic analyses, which includes a variety of programs to clean data matrices, simulate data, and perform basic phylogenetic analyses. Phyx is an ever expanding library of programs, and we welcome any feature requests through github issue submissions: \href{https://github.com/FePhyFoFum/phyx/issues}{https://github.com/FePhyFoFum/phyx/issues}. +All programs are open source and Phyx operates under the GPL3 licence: \href{https://www.gnu.org/licenses/gpl-3.0.html}{https://www.gnu.org/licenses/gpl-3.0.html} + +\subsection{Installing Phyx}\label{introduction} +\begin{flushleft} +Installation instructions for both unix and mac may be found at the Phyx wiki: \href{https://github.com/FePhyFoFum/phyx/wiki/Installation}{https://github.com/FePhyFoFum/phyx/wiki/Installation}. +\end{flushleft} + +\section{Pheatures of Phyx} + +The following is a list of the programs that are currently available. For all programs typing the argument \texttt{-h} will produce a list of program options. Below is a list of current programs with examples on how to run them. Programs are updated regularly with new options being added. The most up to date list of options for each program can be found in the help menu. + +\subsection{Data formats} + +Phyx supports the popular formats for sequence alignments (fasta, fastq, phylip, and Nexus) and trees (newick and Nexus) and uses format auto-detection on the fly. Therefore, for nearly all Phyx programs any of these formats (or a combination thereof, e.g. with \texttt{pxcat}, below) can be used without user specification. + +\subsection{Repeatability} + +Phyx will track the programs and commands input to a file called ``phyx.logfile''. This allows users to see exactly what settings they used to run a program and can help others replicate experiments (say, but including the logfile as supplementary information to a paper). + +\subsection{Piping} + +By optionally reading from \texttt{stdin} and writing to \texttt{stout}, Phyx provides the ability of programs to pipe the output of one into another, allowing for an efficient processing of data. An example of this would be to if someone wanted to perform a codon alignment, then remove all columns with missing data, and finally make a rough neighbor-joining tree. +\begin{flushleft} +\begin{verbatim} +pxaa2cdn -a amino_acid_alignment -n nucleotide_alignment | pxclsq -p 1.0 +| pxnj -n 3 -o output_tree_file +\end{verbatim} +\end{flushleft} + +\section{Examples} + +A list of example files can be found in the ``example\_files'' folder. Subfolder names correspond to individual program names. + +\subsection{pxaa2cdn} + +Often times a coding DNA alignment does not end up with the data divided into sets of three (codons) and as a result this may introduce bias into the analysis or make positive selection tests difficult. This program allows the user to first align the amino acid alignment, then using the alignment the user inputs the corresponding nucleotide sequences and the program will return the codon aligned sequence. +\begin{flushleft} +\begin{verbatim} +pxaa2cdn -a AA_Alignment.fa -n Unaligned_Nucleotide.fa -o CDN_aln.fa +\end{verbatim} +\end{flushleft} + +\subsection{pxbdfit} + +Diversification has becoming a rapidly expanding field and as a result tools to analyze the data are essential. This program will fit a diversification model to a tree. The model which is chosen with \texttt{-m} may be (the default) birth-death model (\texttt{bd}), a pure-birth yule model (\texttt{yule}), or the optimal of these two models (\texttt{best}) as determined by AIC. The program will return the model parameters (b,d,r,e), likelihood, aic and tree statistics. +\begin{flushleft} +\begin{verbatim} +pxbdfit -t bd.tre -m yule +\end{verbatim} +\end{flushleft} + +\subsection{pxbdsim} + +Birth death processes are an essential part to understanding diversification and simulation gives researchers the ability to study these processes using known birth and death parameters. Per-lineage-per-time birth and death rates are specified with the \texttt{-b} and \texttt{-d} arguments, respectively. The user chooses the termination condition, either specifying the final number of extant taxa (\texttt{-e}) or the simulation timeframe (\texttt{-t}). In addition, when running with non-zero extinction the user can choose to return a tree that includes all extinct lineages as well by providing the \texttt{-s} argument. + +\begin{flushleft} +\begin{verbatim} +pxbdsim -e 100 -s -b 1 -d 0.5 -o output_tree_file +\end{verbatim} +\end{flushleft} + +\subsection{pxboot} + +Using a variety of statistical methods for evaluating certainty of phylogenetic trees is essential as all methods have both positives and negatives associated with them. This program will allow the user to create resampled datasets for two of the most commonly used methods: non-parametric bootstrapping and the jackknife. The proportion of data to be incorporated in a jackknife may be specified with \texttt{-f} and a random seed may be specified with \texttt{-x}. + +\begin{flushleft} +Example jackknife: +\begin{verbatim} +pxboot -s Alignment -x 112233 -f 0.50 -o output_of_50_jackknife +\end{verbatim} +Example bootstrap: +\begin{verbatim} +pxboot -s Alignment -p parts -o output_of_bootstrap +\end{verbatim} +\end{flushleft} + +\subsection{pxbp} + +Analyzing similarities among phylogenetic trees has become a growing part of phylogenetics, especially in the field of phylogenomics to determine if a clade is found in a gene tree and in a species tree. This program allows the user to print out all the bipartitions that are in phylogenetic tree file (which may contain multiple trees). + +\begin{flushleft} +\begin{verbatim} +pxbp -t Tree.tre -o bp_output +\end{verbatim} +\end{flushleft} + +\subsection{pxcat} + +When developing a supermatrix for an analysis concatenation of the genes is essential and manual programs that perform this for thousands of genes at once are capable of saving users a lot of time importing each gene into visualization software. This program allows the user to specify a variety of different file types to be concatenated together and can print partition information to a file with the \texttt{-p} argument. + +\begin{flushleft} +An example where the sequences to be concatenated are in a variety of formats: +\begin{verbatim} +pxcat -s *.fas *.fa *.phy -p Parts.txt -o Supermatrix.fa +\end{verbatim} +\end{flushleft} + +\subsection{pxclsq} + +Having a large amount of missing data in a column of a supermatrix, may be due to errors in alignment or a variety of other factors. Therefore, removing highly ambiguous columns of data may help better estimate a model of evolution for a dataset. This program allows the user to specify a proportion of data that is required to be present (\texttt{-p}). The program attempts to detect the sequence type (DNA or protein); if it fails, a protein interpretation can be forced with the \texttt{-a} argument. If the verbose \texttt{-v} argument is used the program will print to screen the name of any sequences that are entirely removed (i.e. are left with only ambiguous characters after other columns have be removed). + +\begin{flushleft} +An example to clean a nucleotide alignment down to only columns with a +maximum of 40\% data allowed to be missing: +\begin{verbatim} +pxclsq -s Alignment -p 0.6 +\end{verbatim} +\end{flushleft} + +\subsection{pxconsq} + +This program will allow the user to get the consensus sequence + +\begin{flushleft} +\begin{verbatim} +pxconsq -s Alignment +\end{verbatim} +\end{flushleft} + +\subsection{pxcontrates} + +Comparing continuous characters across phylogenies provides a valuable tool for understanding the evolution of such characters. Two of the most commonly used models are Brownian and OU models, and this program can be used to estimate the rate of character evolution. The input for this is a fasta file where instead of nucleotide data there is tab delimited character states and a tree file for this to mapped onto. The program may then perform an ancestral state reconstruction (\texttt{-a 0} or default) or test for model fit between OU and Brownian motion (\texttt{-a 1}). + +\begin{flushleft} +Example model test for a set of characters across a tree: +\begin{verbatim} +pxcontrates -c contrates_file.txt -t contrates_tree.tre -a 1 +\end{verbatim} +\end{flushleft} + +\subsection{pxfqfilt} + +Filtering based on a certain quality score is essential for processing raw fastq reads from next generation sequencing data. This program allows the user to specify a mean quality score (\texttt{-m}) and filter based on that quality score. + +\begin{flushleft} +\begin{verbatim} +pxfqfilt -s fqfilt_test.fastq -m 10 +\end{verbatim} +\end{flushleft} + +\subsection{pxlog} + +This program is an MCMC log manipulator and concatenator. Resamples parameter or tree MCMC samples using some burnin and thinning across an arbitrary number of log files. Input files may be indicated using wildcards e.g. `*.trees'. NOTE: resampling parameters are in terms of number of samples, not number of generations. To determine the attributes of the log files, you can first use the \texttt{-i} flag: + +\begin{flushleft} +\begin{verbatim} +pxlog -t *.trees -i +\end{verbatim} +\end{flushleft} +and then sample accordingly: +\begin{flushleft} +\begin{verbatim} +pxlog -t *.trees -b 75 -n 2 -o some_output_filename +\end{verbatim} +\end{flushleft} + +\subsection{pxlssq} + +Due to the high variability that is found in sequences and in data matrices it is often important to find out various aspects (e.g. amount of missing data, character state frequencies, etc.). This program will allow provide the user with a variety of these aspects of a the data and provide an easy way to summarize sequence data and concatenated matrices. + +\begin{flushleft} +\begin{verbatim} +pxlssq -s Alignment +\end{verbatim} +\end{flushleft} + +\subsection{pxlstr} + +Aspects of trees often provide a large amount of information regarding the behavior of the data that was used to create the tree. This program conveniently allows the user to uncover many of these aspects from the command line, such as tree length, whether a tree is rooted, number of terminals, etc. + +\begin{flushleft} +\begin{verbatim} +pxlstr -t Tree.tre +\end{verbatim} +\end{flushleft} + +\subsection{pxmrca} + +This program will provide the information regarding the most recent common ancestor, giving number of tips in the tree and number of tips for each clade specified. The clade that will be analyzed is the smallest clade containing the tips specified. Specifically the user provides the species in a clade of interest using an MRCA file formatted as follows: +\texttt{MRCANAME = tip1 tip2} + +\begin{flushleft} +\begin{verbatim} +pxmrca -t mrca_test.tre -m mrca.txt +\end{verbatim} +\end{flushleft} + +\subsection{pxmrcacut} + +With extremely large trees becoming more common place (species level, gene families etc.) it is useful to focus on certain clades. This program allows the user to specify tips of a clade (-m), only two are required and will remove a newick for the smallest clade that encompasses both species specified. mrca file format: +\texttt{MRCANAME = tip1 tip2} + +\begin{flushleft} +\begin{verbatim} +pxmrcacut -t tree -m mrca_file +\end{verbatim} +\end{flushleft} + +\subsection{pxmrcaname} + +This program allows the user to label the internal nodes with clade names. The program takes in an mrca file in the same format as (pxmrca and pxmrcacut) + +\begin{flushleft} +\begin{verbatim} +pxmrcaname -t tree -m mrca_file +\end{verbatim} +\end{flushleft} + +\subsection{pxnj} + +This program will create a basic neighbor joining tree from an alignment matrix. + +\begin{flushleft} +\begin{verbatim} +pxnj -s Alignment.aln +\end{verbatim} +\end{flushleft} + +\subsection{pxnw} + +This program will do pairwise alignments using the Needleman-Wunsch algorithm. It also allows alignment scores to be analyzed and various scoring matrices to be used by specifiying the \texttt{-m} argument. + +\begin{flushleft} +\begin{verbatim} +pxnw -s Alignment.aln +\end{verbatim} +\end{flushleft} + +\subsection{pxrecode} + +This program will recode a nucleotide alignment using any combination of the recognized recoding schemes: R (A$|$G), Y (C$|$T), S (C$|$G), W (A$|$T), M (A$|$C), K (G$|$T), B (C$|$G$|$T), D (A$|$G$|$T), H (A$|$C$|$T), V (A$|$C$|$G). Recoding schemes (e.g., `RY', `SW', `MK', etc.) are specified with the \texttt{-r} argument. If no scheme is provided, RY-coding is used by default. + +\begin{flushleft} +\begin{verbatim} +pxrecode -r ry -s Nucleotide.fa +\end{verbatim} +\end{flushleft} + +\subsection{pxrevcomp} + +This program will provide the reverse complement of DNA sequences from an alignment file. + +\begin{flushleft} +\begin{verbatim} +pxrevcomp -s Nucleotide.fa +\end{verbatim} +\end{flushleft} + +\subsection{pxrls} + +This program allows the user to rename taxa by giving a sequence file and specifying files listing current \texttt{-c} and new names \texttt{-n}; name ordering in the files must be identical, with one taxon per line. + +\begin{flushleft} +\begin{verbatim} +pxrls -s SeqFile -c CurrentNames -n NewNames +\end{verbatim} +\end{flushleft} + +\subsection{pxrlt} + +This program provides a way to relabel the tips of trees by giving a tree file and specifying files listing current \texttt{-c} and new names \texttt{-n}; name ordering in the files must be identical, with one taxon per line. + +\begin{flushleft} +\begin{verbatim} +pxrlt -t kingdoms.tre -c kingdoms.oldnames.txt -n kingdoms.newnames.txt +\end{verbatim} +\end{flushleft} + +\subsection{pxrms} + +This program will remove sequences from a sequence file, either by typing them on the command line using \texttt{-n} (comma-delimited) or by specifying a file using \texttt{-f} (one taxon per line). Use the \texttt{-c} flag to remove the complementary taxa. + +\begin{flushleft} +\begin{verbatim} +pxrms -s Nucleotide.fa -f taxa_to_delete.txt +\end{verbatim} +\end{flushleft} + +\subsection{pxrmt} + +This program will remove tips from a tree file, either by typing them on the command line using \texttt{-n} (comma-delimited) or by specifying a file using \texttt{-f} (one taxon per line). Use the \texttt{-c} flag to remove the complementary taxa. + +\begin{flushleft} +Example to remove tips s1, s6, and s8: +\begin{verbatim} +pxrmt -t rmt_test.tre -n s1,s6,s8 +\end{verbatim} +\end{flushleft} + +\subsection{pxrr} + +This program will re-root trees in a tree file based on specified outgroups (\texttt{-g}), or the program can unroot a tree (\texttt{-u}). For re-rooting, if not all the outgroups are found in the tree the program will print an error. However, \texttt{pxrr} can re-root the tree based on the outgroups that \textit{are} available by using the silent option (\texttt{-s}). Alternatively, if the outgroups are ranked in preference but not all necessarily present in a given tree \texttt{pxrr} can root on the first outgroup present by using the \texttt{-r} option. It provides a useful tool for re-rooting thousands of trees which can then be used for analyzing gene discordance across phylogenies. + +\begin{flushleft} +Example to root on the outgroups s1 and s2: +\begin{verbatim} +pxrr -t rr_test.tre -g s1,s2 +\end{verbatim} +\end{flushleft} + +\subsection{pxs2fa and pxs2phy and pxs2nex} + +This programs are all designed in a similar vain, with the ability to convert a file from its current format to fasta, phylip or nexus, respectively. You may also specify if you would like to have the output in uppercase with the option \texttt{-u}. + +\begin{flushleft} +\begin{verbatim} +pxs2* -s Alignment +\end{verbatim} +\end{flushleft} + +\subsection{pxseqgen} + +This is a sequence simulator that allows the user to give a tree and specify a model of evolution and sequences will be generated for that tree under the model. Some features are that it allows for the model of evolution to change at nodes along the tree using the \texttt{-m} option. The program also allows the user to specify rate variation through a value for the shape of the gamma distribution with the \texttt{-g} option and the user is able to specify the proportion of invariable sites the would like to include using the \texttt{-i} option. Other options can be found from the help menu by typing \texttt{-h} after the program. + +The sequence simulator features have been thoroughly tested except the multimodel simulation which is still under active development and has not been thoroughly tested to the developers comfort! + +For multimodel simulations it is easiest to print out the node labels on your tree originally using the \texttt{-p} option. Once you know the nodes that you would like the model to change at you can specify these nodes on the input using the \texttt{-m} option. An example if you wanted two models of evolution on your tree one for the tree and one where it changes at node two, you would enter the command as follows. + +\begin{flushleft} +example\_file example (which uses a simple JC69 model): +\begin{verbatim} +pxseqgen -t seqgen_test.tre +\end{verbatim} + +Substitution model parameters are always given in the following order (with no spaces): + +A$<$-$>$C,A$<$-$>$G,A$<$-$>$T,C$<$-$>$G,C$<$-$>$T,G$<$-$>$T. +\newline +\newline +Multi-model commands are given as the following: +pxseqgen -t tree\_file -m A$<$-$>$C,A$<$-$>$G,A$<$-$>$T,C$<$-$>$G,C$<$-$>$T,G$<$-$>$T,Node\#,A$<$-$>$C,A$<$-$>$G,A$<$-$>$T,C$<$-$>$G,C$<$-$>$T,G$<$-$>$T +\newline +\newline +If, for example, the model you want for the tree is (.33,.33,.33,.33,.33) and you want the model to change at node two to (.30,.30,.20,.50,.40), the command would be as follows: + +\begin{verbatim} +pxseqgen -t tree_file -o output_alignment +-m .33,.33,.33,.33,.33,.33,2,.3,.3,.2,.5,.4,.2 +\end{verbatim} +\end{flushleft} + +\subsection{pxsstat} + +This program calculates multinomial alignment test statistics that can be used for assessing model adequacy. Currently limited to the test statistic of Bollback (2002) MBE, but more are coming. + +\begin{flushleft} +\begin{verbatim} +pxsstat -s Alignment.fa +\end{verbatim} +\end{flushleft} + +\subsection{pxstrec} + +This is a program that does some ancestral state reconstruction and stochastic mapping of categorical characters. There are a number of options and the requirement for a control file. The control file can be as simple as ancstates = all which designates that you want ancestral states calculated for each node. The can then be output on a tree in a file given by an -o FILE option. If you only want to look at particular nodes, these can be designated in the control with the \texttt{mrca = MRCANAME tipid1 tipid2}. Then the MRCANAME can be given at the \texttt{ancstates = MRCANAME}. If you would like stochastic mapping with the time in the state mapped you can use the same format but instead of ancstates you would put stochtime. For stochastic number of events stochnumber or `stochnumber any. For the stochastic mapping, you will need to designate an MRCA or MRCAs (not all). Multiple can be separated by commas or spaces. You can output these to a file with -n for number of events, -a for the total number of events, and -m for the duration. + +\begin{flushleft} +\begin{verbatim} +pxstrec -d test.data.narrow -t test.tre -c config_stmap +\end{verbatim} +\end{flushleft} + +\subsection{pxsw} + +This program will do pairwise alignments using the Smith-Waterman algorithm. It also allows alignment scores to be analyzed and various scoring matrices to be used (\texttt{-m}). + +\begin{flushleft} +\begin{verbatim} +pxsw -s Alignment.fa +\end{verbatim} +\end{flushleft} + +\subsection{pxt2new} + +This will convert a tree file to newick format. + +\begin{flushleft} +\begin{verbatim} +pxt2new -t Tree.nex +\end{verbatim} +\end{flushleft} + +\subsection{pxtlate} + +This program will take an input coding DNA sequence and translate it to the associated amino acid alignment. The \texttt{-t} argument specifies which translation table to use; the standard code is used by default. Use \texttt{-h} to see which tables are currently available, and feel free to suggest additions (\href{https://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi}{see alternative translation tables described on genbank}). + +\begin{flushleft} +\begin{verbatim} +pxtlate -s Sequence.fa +\end{verbatim} +\end{flushleft} + +\subsection{pxtscale} + +This program will rescale a tree when the user inputs either a scaling factor (\texttt{-s}) or a root height (\texttt{-r}; this option requires an ultrametric tree). + +\begin{flushleft} +\begin{verbatim} +pxtscale -t Tree -s 2.0 +\end{verbatim} +\end{flushleft} + +\subsection{pxupgma} + +Provides publication quality Unweighted Paired group Method with Arithmatic Mean (UPGMA) tree, just kidding don't use this for a final tree mainly designed as a teaching tool. + +\begin{flushleft} +\begin{verbatim} +pxupgma -s drosophila.aln +\end{verbatim} +\end{flushleft} + +\subsection{pxvcf2fa} +Convert vcf file to fasta, and can force upper case with \texttt{-u}. +Currently only handles haploid data; phased data will come soon. + +\begin{flushleft} +\begin{verbatim} +pxvcf2fa -s vcf_file +\end{verbatim} +\end{flushleft} + +\end{document} \ No newline at end of file diff --git a/doc/Programs.md b/doc/Programs.md new file mode 100644 index 0000000..383e224 --- /dev/null +++ b/doc/Programs.md @@ -0,0 +1,392 @@ +# Current programs +Here is a list of the current programs in phyx. If you have suggestions for new programs, please let us know by submitting an [issue](https://github.com/FePhyFoFum/phyx/issues). + +By default, all programs are compiled with `make`. An individual program can be compiled with the command `make `. + +As with typical Unix programs, help is displayed with the `-h` flag, printing out a menu with the options and their types. Alternatively, help information can be displayed in individual man pages `man `. Not all of the program options are described below, so make sure to check the help to see what is available. Program version information can be obtained by using the `-V` flag (note uppercase; lowercase `-v` is typically reserved for more verbose output). + +A few notes on default behaviour. First, as with standard Unix programs, output files are overwritten without warning, so it is important to be aware of this. Second, most programs that produce output do so to a default format: newick for trees, and fasta for sequences. However, these can always be piped to a subsequent program to change the format (see below). By default, all results are written to standard output (i.e., the terminal screen), as this is what allows the programs to be piped together. However, all programs have the option of writing to a file with the `-o` option. + +If you would like to process a large number of files at once a simple command line for loop will let you do that. An example would be if you have a few thousand fasta files that you would like to remove all ambiguous data from, you can run a line of code such as this: +``` +for x in *.fa; do pxclsq -s $x -o $x-cln -p 1.0; done +``` +The programs can also automatically pipe the output of one into another the input of another. An example of this could be to take the aligned amino acid sequences and guide that to align nucleotide sequences, then clean the file, then create a quick neighbour-joining tree: +``` +pxaa2cdn -a amino_acid_alignment -n nucleotide_alignment || pxclsq -p 1.0 || pxnj -o output_tree_file +``` + +* **pxaa2cdn**: produce a codon alignment from and AA alignment and unaligned nucleotides + +This is a program that lets you change an unaligned nucleotide sequence into its corresponding codon alignment. This is useful for calculating Ka/Ks values and any other analyses that require the nucleotides be aligned by codon. The program requires an aligned amino acid file and the corresponding unaligned nucleotide file. Any sequences that are found in one file and not the other are removed. In addition, the last codon can be removed with the `-r` option. +``` +pxaa2cdn -a aa_alignment_file -n nucleotide_alignment_file +``` + +* **pxbdfit**: diversification model inference + +Fit a diversification model to an ultrametric tree. Model is controlled by the `-m` flag, which has the options `bd` (default), `yule`, or `best` (the optimal model as determined by AIC). Returns model parameters (b, d, r, e), likelihood, aic, and tree statistics. +``` +pxbdfit -t tree_file -m yule +``` + +* **pxbdsim**: a birth death simulator + +This program is a birth death simulator that allows the user to either specify the number of extant species (`-e`) or the simulation can be run for a given amount of time (`-t`). The simulator also allows for the incorporation of the taxa that have gone extinct (via the `-s` flag). +``` +pxbdsim -e 100 -s -b 1 -d 0.5 +``` + +* **pxboot**: sequence alignment resampling (bootstrap or jackknife) + +This program is designed to either run a bootstrap (sampling with replacement; default) or a jackknife (sampling without replacement) on an alignment. To perform a jackknife a percentage must be specified with the `-f` argument. + +Example jackknife: +``` +pxboot -s alignment_file -x 112233 -f 0.50 +``` +Example bootstrap: +``` +pxboot -s alignment_file -p partition_file +``` +where 'partition_file' above is a RAxML-style partition file so that conserved-partition bootstrapping can be accomplished. + +* **pxbp**: prints out bipartitions that make up the tree + +This program takes in a tree file and prints out all the bipartitions that compose the tree. See the help for all program options. +``` +pxbp -t tree_file +``` + +* **pxcat**: an alignment concatenator + +Concatenates sequence files and produces a partition file in RAxML/IQtree format. The sequences can be in any format (fasta, phylip, nexus). You can list all the sequences or use a wild card ex `*.fasta` which would then concatenate everything that ends in fasta. At times the list of files may be too long and reach the shell limit, in which case you can create a file with all the sequences you could like to be concatenated. An example of this would be if you have a large number of files that end in .fa and you reach a limit from concatenating using *.fa, then you can do: +``` +for x in *.fa;do echo $x >> file.txt;done +``` + + +Concatenating from shell: +``` +pxcat -s *.fa *.phy *.nexus -p output_partition_file -o concatenated_alignment +``` +Concatenating using a file: +``` +pxcat -f file.txt -p output_partition_file -o concatenated_alignment +``` + +* **pxclsq**: clean sites based on missing or ambiguous data + +Remove alignment sites based on proportion of missing data (`-p`). By default, removes individual sites from all sequences. Alternatively, missing data can be considered by codon (`-c`) or by taxa (`-t`, where entire sequences with missing data > p are removed). + +``` +pxclsq -s alignment_file -p 0.1 +``` + +* **pxcltr**: general tree cleaner + +Removes annotations (node labels, `-l`), 'knuckles' (2-degree nodes; `-k`), and root edges (`-r`) to generate a 'vanilla' newick representation. By default removes all properties. Alternatively choose 1 property. +``` +pxcltr -t tree_file +``` + +* **pxcolt**: collapse poorly-supported edges + +This program collapses edges below some support threshold `-l`. This threshold given as a proportion, even if support values are not; e.g., if all edges below a support value of 70 are to be collapsed, specify `-l 0.7`. +``` +pxcolt -t tree_file -l threshold +``` + +* **pxcomp**: compositional homogeneity test + +Chi-square test for equivalent character state counts across lineages. +``` +pxcomp -s alignment_file +``` + +* **pxconsq**: a consensus sequence constructor for an alignment +``` +pxconsq -s Alignment +``` +* **pxcontrates**: a brownian and ou estimator +``` + +pxcontrates -c contrates_file.txt -t contrates_tree.tre -a 1 +``` + +* **pxfqfilt**: a fastq filter given a mean quality + +``` +pxfqfilt -s fastq_file -m 10 +``` + +* **pxlog**: a MCMC log manipulator/concatenator + +Resamples parameter or tree MCMC samples using some burnin and thinning across an arbitrary number of log files. NOTE: resampling parameters are in terms of number of samples, _not_ number of generations. Can combine burnin (`-b`) and thinning (`-n`). To determine the attributes of the log files, you can first use the `-i` (`--info`) flag: +``` +pxlog -t tree_log_file -i +``` +and then sample accordingly: +``` +pxlog -t tree_log_file -b 10000 -n 100 +``` + +* **pxlssq**: information about seqs in a file (like ls but for an alignment file) + +Prints summary information about a sequence alignment, including number of taxa/characters, character frequencies, etc. Get statistics for each taxon (rather than the alignment as a whole) by supplying the `-i` argument. +``` +pxlssq -s alignment_file +``` + +* **pxlstr**: information about trees in a file (like ls but for a tree file) + +Prints summary information about trees, including whether it is rooted/binary/ultrametric, number of terminals, tree length, etc. +``` +pxlstr -t tree_file +``` + +* **pxmono**: monophyly tester + +Check whether a list of taxa form a monophyletic clade in a tree (or set of trees). The terminal taxa can be specified either with a comma separated list (`-n`) or from a file (one name per line; `-f`). +``` +pxmono -t tree_file -n taxon_1,taxon_2,taxon_3 +``` + +* **pxmrca**: information about an mrca + +This program will provide the information regarding the most recent common ancestor, giving number of tips in the tree and number of tips for each clade specified. The clade that will be analyzed is the smallest clade containing the tips specified. +``` +pxmrca -t tree_file -m mrca.txt +``` + +* **pxmrcacut**: a mrca cutter + +Extract a subclade from a tree through specification of an MRCA. +``` +pxmrcacut -t tree_file -m mrca_file +``` + +* **pxmrcaname**: a mrca label maker + +Label internal nodes (specified by MRCA statements) with clade names from a file (`-m`). +``` +pxmrcaname -t tree_file -m mrca_file +``` + +* **pxnj**: neighbour-joining tree inference + +A basic neighbour-joining program that will produce trees with the 'canonical' branch lengths (# of substitutions instead of average # of substitutions per site). For teaching purposes; definitely not for making publishable trees. +``` +pxnj -s alignment_file +``` + +* **pxnni**: a nni changer + +Performs a nearest neighboor interchange (NNI) on a tree. +``` +pxnni -t tree_file +``` + +* **pxnw**: needleman-wunsch alignment + +An alignment program that performs an analysis of pairwise alignments using the Needleman Wunch algorithm for all sequences in the file. It has the options of outputting the scores (`-o`) and the alignment (`-a`). The program also allows the user to input a matrix or uses EDNA for DNA and Blossum62 for AA as defaults. +``` +pxnw -s alignment_file +``` + +* **pxpoly**: a polytomy sampler that generates a binary tree + +Randomly samples 2 descendant lineages from each polytomy in a tree to generate a fully binary tree. Currently restricted to rooted trees. +``` +pxpoly -t tree_file +``` + +* **pxrecode**: a sequence alignment recoder + +Recodes a nucleotide alignment using any combination of the recognized recoding schemes: R (A|G), Y (C|T), S (C|G), W (A|T), M (A|C), K (G|T), B (C|G|T), D (A|G|T), H (A|C|T), V (A|C|G). Recoding schemes (e.g., `RY`, `SW`, `MK`, etc.) are specified with the `-r` argument. If no scheme is provided, RY-coding is used by default. +``` +pxrecode -r ry -s alignment_file +``` + +* **pxrevcomp**: a reverse complementor + +Replace sequences with their reverse complement. By default this is applied to all sequences; individual sequences can be specified with the `-i` argument. +``` +pxrevcomp -s alignment_file +``` + +* **pxrls**: taxon relabelling for sequences + +Takes two ordered lists of taxon labels, `-c` (current) and `-n` (new), with one label per line. Substitutes the former for the latter in an alignment passed in by `-s` (or stdin). This is convenient for switching between lab codes for analysis and taxon names for data archiving. +``` +pxrls -s alignment_file -c curren_name_file -n new_name_file +``` + +* **pxrlt**: taxon relabelling for trees + +Takes two ordered lists of taxon labels, `-c` (current) and `-n` (new), with one label per line. Substitutes the former for the latter in trees passed in by `-t` (or stdin). This is convenient for switching between lab codes for analysis and taxon names for figure preparation. +``` +pxrlt -t tree_file -c curren_name_file -n new_name_file +``` + +* **pxrmk**: remove two-degree nodes from a tree + +Removes two-degree internal nodes ('knuckles') from a tree. +``` +pxrmk -t tree_file +``` + +* **pxrms**: pruning seqs (like rm but for seqs) + +Delete all sequences specified by a comma-deleimted list (`-n`) or a file (`-f`; one per line) from an alignment. Use the `-c` flag to remove the complementary taxa. +``` +pxrms -s alignment_file -f taxon_name_file +``` + +* **pxrmt**: pruning trees (like rm but for trees) + +Prune all taxa specified by a comma-deleimted list (`-n`) or a file (`-f`; one per line) from a tree. Use the `-c` flag to remove the complementary taxa. +``` +pxrmt -t tree_file -n s1 +``` + +* **pxrr**: rerooting and unrooting trees + +Re-root trees based off of given outgroup(s) (`-g`) or unroot (`-u`). Outgroups are specified If not all the outgroups are found in the tree the program will print an error. However, the program can re-root the tree based on the outgroups that _are_ available by using the silent option (`-s`). Alternatively, if the outgroups are ranked in preference but not all necessarily present in a given tree the program can root on the first outgroup present by using the `-r` option. +``` +pxrr -t tree_file -g s1,s2 +``` + +* **pxs2fa**: convert an alignment to fasta format + +Convert characters to uppercase with the `-u` argument. +``` +pxs2fa -s alignment_file +``` + +* **pxs2nex**: convert an alignment to nexus format + +Convert characters to uppercase with the `-u` argument. +``` +pxs2nex -s alignment_file +``` + +* **pxs2phy**: convert an alignment to phylip format + +Convert characters to uppercase with the `-u` argument. +``` +pxs2phy -s alignment_file +``` + +* **pxseqgen**: Sequence simulation program + +This is a sequence simulator that allows the user to give a tree and specify a model of evolution and sequences will be generated for that tree under the model. Some features are that it allows for the model of evolution to change at nodes along the tree using the (`-m`) option. The program also allows the user to specify rate variation through a value for the shape of the gamma distribution with the (`-g`) option and the user is able to specify the proportion of invariable sites the would like to include using the (`-i`) option. A rate matrix can be specified with the `-r` option () in the order: A<->C,A<->G,A<->T,C<->G,C<->T,G<->T). Other options can be found from the help menu by typing (`-h`) after the program. + +For multimodel simulations it is easiest to print out the node labels on your tree originally using the (`-p`) option. Once you know the nodes that you would like the model to change at you can specify these nodes on the input using the (`-m`) option with the format: rates1,node#,rates2. For example, if the model you want for the tree is (.33,.33,.33,.33,.33,.33) and the model you want to change to at node two is (.3,.3,.2,.5,.4,.2): +``` +pxseqgen -t tree_file -m .33,.33,.33,.33,.33,.33,2,.3,.3,.2,.5,.4,.2 +``` + +* **pxssort**: sequence sorter + +Sort sequences by id (`-b 1`; default), reverse id (`-b 2`), length (`-b 3`), or reverse length (`-b 4`). +``` +pxssort -s alignment_file -b 3 +``` + +* **pxsstat**: multinomial alignment test statistics + +This program calculates multinomial alignment test statistics that can be used for assessing model adequacy. Currently limited to the test statistic of Bollback (2002) MBE, but more are coming. +``` +pxsstat -s alignment_file +``` + +* **pxstrec**: a state reconstructor + +Ancestral state reconstruction and stochastic mapping of categorical characters. There are a number of options and the requirement for a control file. The control file can be as simple as `ancstates = _all_` which designates that you want ancestral states calculated for each node. The can then be output on a tree in a file given by an `-o FILE` option. If you only want to look at particular nodes, these can be designated in the control with the `mrca = MRCANAME tipid1 tipid2`. Then the MRCANAME can be given at the `ancstates = MRCANAME`. If you would like stochastic mapping with the time in the state mapped you can use the same format but instead of `ancstates` you would put `stochtime`. For stochastic number of events `stochnumber` or ``stochnumber_any`. For the stochastic mapping, you will need to designate an MRCA or MRCAs (not _all_). Multiple can be separated by commas or spaces. You can output these to a file with `-n` for number of events, `-a` for the total number of events, and `-m` for the duration. +``` +pxstrec -d test.data.narrow -t tree_file -c config_stmap +``` + +* **pxsw**: smith waterman alignment + +An alignment program that performs an analysis of pairwise alignments using the Smith Waterman algorithm for all sequences in the file. It has the options of outputting the scores (`-o`) and the alignment (`-a`). The program also allows the user to input a matrix or uses EDNA for DNA and Blossum62 for AA as defaults. +``` +pxsw -s alignment_file +``` + +* **pxt2new**: convert a tree to newick format +``` +pxt2new -t tree_file +``` + +* **pxt2nex**: convert a tree to vanilla Nexus format +``` +pxt2nex -t tree_file +``` + +* **pxtcol**: annotate tree to colour edges + +Uses tab-delimited files of mrcas (`-m`) or nodeids (`-d`) to annotate a tree string with colouring information. Output is a Nexus-formatted tree file which can be read by FigTree. +``` +pxtol -t tree_file -d node_annotation_file.tsv +``` + +* **pxtcomb**: tree combiner + +Combine a set of trees from one file (`-a`) into a tree from another (`-t`). +``` +pxtcomb -t tree_file -a alternate_tree_file +``` + +* **pxtgen**: exhaustive tree topology generator + +Generate all possible unrooted (default) or rooted (`-r`) topologies for `-n` taxa. Limited to <= 10 taxa. Report just the number of possible trees with the `-c` option. +``` +pxtgen -n 8 -r +``` + +* **pxtlate**: translate nucleotide sequences into amino acids + +Translates nucleotide sequences to their corresponding amino acid sequences. By default it uses the standard translation table, but this can be changed with the `-t` argument (use `-h` to which tables are currently available). +``` +pxtlate -s alignment_file +``` + +* **pxtrt**: extract an induced subtree from a larger tree + +By specifying a list of taxa, extract the induced subtree from a more comprehensive reference tree. The terminal taxa can be specified either with a comma separated list (`-n`) or from a file (one name per line; `-f`). +``` +pxtrt -t tree_file -n taxon_1,taxon_2,taxon_3,taxon_5,taxon_8,taxon_13,taxon_21,taxon_34,taxon_55,taxon_89 +``` + +* **pxtscale**: tree rescaling + +Tree rescaling by providing either scaling factor (`-s`) or root height (`-r`) (not both); the latter requires an ultrametric tree. +``` +pxtscale -t tree_file -s 2.0 +``` + +* **pxupgma**: upgma tree inference + +This is a basic upgma tree builder based on uncorrected p-distances. Definitely not for making publishable trees; it's here because there are not many out there and it's useful if you're teaching a phylogenetics class and need an example of one of the earliest ways trees were made. +``` +pxupgma -s alignment_file +``` + +* **pxvcf2fa**: convert vcf file to fasta alignment + +Convert characters to uppercase with the `-u` argument. +``` +pxvcf2fa -s vcf_file +``` + +# Programs in development +* **pxnprs**: calculate a time calibrated tree with NPRS +* **pxtrsq**: tree-seq; remove from tree and alignment taxa not found in both (JWB) +* **pxgbdb**: a basic genbank database creator +* **pxtdist**: tree distance calculator (JWB) + +# Programs in planning +* **pxcoal**: gene trees in species trees; simulation and probabilities. (JWB) +* **pxau**: calculate the "approximately unbiased" test tree probabilities (Shimodaira, 2002). 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+gagatgcatggaaaaatggatcttgctcttttggctggatcatatgagaaactcattgat +ttttgtcttgattccactaaggtctatatggctttggatttagttgatgagatgtgtgaa +gcaggtttatccttatccacgggagcactcaatgccatatgtcatgcctgtgaggagagc +tgtgaatatatgctggctcgtcggatctataaaatgctctgtgaccacaaattgaagcca +aatactgagacgttcagaagtattataaacttgaacgttagaatgaaagattttgataat +gcatatgccgtgttaaaagatttgggaaagatgaatttggtgccttcagcaagtatgtac +aatgctatattggctggttgttatagagagaaaaacaagaatggtgtgctcagggttctc +aaagaaatgaaagatgcggatgtcaaaccagattctcagactttcagctatctgataagc +aactgtgcatgtgaagaagacattattaagtattatgaacaactggaggatgttggtgtt +aatccaacaaagcaagttttcatggcactcataaatgcatatgctgcaactggccaattt +gagaaggccaaggaggttgtcaaagagaaaggaatacttacgaagaacttgcatgaaatc +aaaagtactcttgtctcgtctctggcatcacatggaaaaatgtctgatgcactggccatt +tacaaggaaatgaaaaagaatggtttctctttggagccaaaggccgttatatctctcatc +gaaaaccagcattataaaggagacttgaaggtattgctcagcttgcttgaagatttgaat +---gatccacaatattggattgatggttgctgcagacttatcttgtactgtgttcggaac +aaggaattgaggactgctgttgatttgttgaaaaaactttctgataattgtcgggatgat +gatttggctagagaagttatttttgatgaggtattttcacacattgcggattcagagcat +cctgatttgcagatcggaatagacttgctccaagctattaaggaggatctgaagttgtac +ccttcacgaaaatgtctggattttctacttagtgcttgtgttaatgggaaggatctccag +aaagcccgattggtgtggaaggagtataagataaatggtcttccatacaacattttaagc +tacttgaggatgtaccaggcattcctgatttcaggagatgcagcagcagccaaacatttt +ctgagtaaaataccgaaagatgatccacatgttctgtctgtgcttcacgcgtgccgtgta +acctat------gcaaagcccaaggaggaa---------aaaaagaaggaaaagaaaaag +aaaaagaagaaaaaaaca +>s3 +------------------------------------------CCAAAAACGCCACTTGAT +CCTGCGGCAGAGATAAAGCAGCGCCTCAAAACCCTGACATTGCGATCGAAGAAAGCAGTC +CTAAAGCAG------AGCGTCCAG---ACCGCCCTTCCT--------------------- +---------GCAGTTTCCGTTGATATAACATCCAAGACAGAAGCGCCAAGTCTTCCTGTG +------------------------------------AAGAATGAAACTCTAAAGCAGTTT +GTCTGTTTGATA---------AACCCTGTTTCTTCG------------------------ +---------------------------------------------------TCG------ +------------------------------------------------------------ +---------TCCCAG------------CAC------TCGTTCCAGGATGAACTTATGCGT +AGCTTTACTGACGGT---------TCGTCAAAT------------------------GGT +TCAGCCAAGATAGTAACAAATGAGATATCTGCAATATTATGCGGTGGCAAGTATGCAGAG +AGTGTTTGTTCCATTGACTTA---GAGGTTGAAAGTGATAAACCTATTGAAAAGGAACTT +GAGCTACCATGGTTTGCGACTATGTGTCATAGTGGTGAATCATCATGCCGGAAAGAAGTT +TCTCGTGAGCGGAAGCAGAAATGGATCTTCAAGAATACCCAACAAAGTTGGTTTCAAAAG +CTGATAATAATGTGTGGTGAAAAACTGGGTTCAGATGCTATCATGAAGATGCTTGCTAGA +TTAGGCCGGGAGACTGGTCTAAAAGAATACAGTGCATATATAAGACTTTGTGTAGAAACT +GCTAGGAAAACTGAAGATGAAGAAGTCCAGTTGGAGCAGACTTATCTAGCTTATCAGCTT +TTCAGAAAAATGAAGGAAGCCGGACTTCCTATGGAGGAGGAAACTTATAGCCCATTTCTT +ATGTATCTGATTGATATGCGGATGGAAGAGGAGTTCTATTTTTTCCTTGCAGTCATCAAA +GATGAGGATTCTACTTGCAATGCAAGATTTTGCTATTATGAATTACTGCTCTTGATTGAC +GTGGGCAATGAAAACAAAATTCACGAGCTTATTCATCAGGTTACTGCAGGGGATACTGAA +GGGCGATCTGCAATACAA---------GAAAATTATCTGTTGGCATTATGCCAAAGGGAC +AGGAAGAATGAACTTTTGGAACTGTTGGAAACTATTGATGTTACTGGTCTTTCATCA--- +GCCACAGCAGTTAGTGTTTTCAAATCCCTGGGGAGGCTAGAACTGCAGCCTTTTGCAGAG +AAGTTTATTTTGACATTCAAGGCAAGCGGTCATGGGGCTGAAAGCATATCAGACTTCATC +TTTTCCTATGTTACTAGCATGAAAAAACTAGCGGTTGAGGATATGATATTGAAGTATGAA +GACATGCATACAAAAGCAGATATTTTGCCTTCATCTACACTCTATGAGAAGCTTATTAAT +TTCGCTTGTAGTTCTCTTGAGGTACATTCTGCTTTGGATCTGGCGGATCGGATGTGTGAA +GCAGGATTTACCATATCAGCCGAAACAGTTAATGGCATCTTACATGCATGCGAAGAAAGC +TATGACTATGATTTGGTTGGACGAATATATTCGGTTCTCTCACGCCACAACTTGAAGCCA +GATAGTGAGACCTTCGAGAGCATGGTTAATTTGTGTGTTAGAATAAGAGATTATGCCGGT +GCTCGCAAAATGCTGAACGAATCGGAGAAAAGGAATCTAGGTCCTACGGCCACTATGTAC +AATGCTATAATGGGCGGCTTTTACCGCGAGAAGAATGTCGTCGGAGCGTTGGCAGTTCGT +AGAGATATGGAAAAGAAAAACGTGAAACCTGATCCTCACACCTACTCTTACCTCATTGGC +AACTCTGAGTGCTTGGAAGATGTTATCAAGTACTACGAGGAAATGAAGTCCACAGGAGTC +CAAGTTACAAAAATTGTGTACATGGCACTTATAAATGCCTATGCTGCTTGTGGAGACTTT +GAGAAAGCCAAAAAGGTAGTCCTGGACAACGGAATACCCAAAAGGAACTTAAATGAAGTC +AGAAGTGCGCTTGTTTCTGCTCTTGCATCACATGGTCGAATGTCTGATGCTCTTGAGATT +TATGATAAAGTGAAGCAAATTGGTTTCAGTTTAGAGCCAAAAGCCATCATATCTCTCATC +GAATACATGCAACCAGAA---GAACTGGGCAGACTATTCAACTTGATTGACGAACTGAGG +---GATCGATACTATTGGGTAGATGCTTGCTTCAGAGGCATTGCTCTTTGTGTTAGAAAC +AAAAAACTAAGGTCTGCTATTGACTTGATTAAGAAGCTCTTGAATAAATTGCATGATGAG +AAATTTGCAGTTGAATTTCTTCTTGATGAGGTATTCTTCCAAATTGCAGAGCTGGAGCCT +CCAGATCTGCAGATTGGTTTAGACCTGCTTACGGCGATAAAGGAAGAGCTTAAGCTTCAG +CCTTCAAGGAAGTCTCTGGATTTTCTGCTTAGTGTTTGTGTCAACACAAAGGATGTGAGG +AGTTCACATCTGATATGGGAGGAGTACCAAAAGGCAGGGTTTCCTTACAATGTTCTAAGC +TTCCTAAGGATGTATCAGGCACTCCTGGCTGCAGGTGATTTAACATCTGCTGCAAAAGTG +CTAAATAGAATGCCGAAAGATGATGTCCATGTCCGAATGCTCATCAGCTCATATCAGTCT +ACTTACATGTCTGCT------------AGA---------AATGGCAAGAAAGAGAAGATA +AAGTTGAGTTTGAAATGA +>s4 +---------------------------------------------GAAATGCCCGCCTCA +GGAGCC---------------------AAAAACCTAAGC---------------TCATTG +TTCCGCTCC------GCCGTTAAA---ACCGCCACCGCC--------------------- +---------GCTAAACCAGCTAAGAAAACTTCC---------------------CCACCG +------------------------------------GAGGACACAGCCCTGAAGCAATAC +CTCTCTCTGCTCGGAACTTCATCCCCGATCACGTCT------------------------ +---------------------------------------------------ACTTTAAAA +TCGGCACCACATAAACCTCAGCTCTCTGAGAAGCCACCGAACTCATCACTTCCTCAGTCG +AAGCGAGAGACTAAA------------CAC------TCAGTCAGTGATTTGGTCCTCCTA +AGCCCGAAACAAGGAGCCACAAAGAGCCCTGAG------------------------GAT +TCAGCAAAGGAGATATCCAGAGAGATATCGGCAATATTGTGTGGTAGCAGAGACTTGGAT +TCGTCT---------GACTTACGAGAGGCTGACACAAGGAAACCTATAGAAAAGGTTCTT +GAGCTGCCATGGTTTTCAAATTTGTGTCACAACGGCACATCATTGCGTCGAAAAGAGATA +TCACGGCGACGGAAACAAAAATGGATATTCAAGAATACCCAAAAAAATTGGTTTGGCCGG +TTGGTGACAATGTGTGCAGAAAAACTTGGTGCAGATGCTACTATTCAGGTATTTGGTAAA +TTAGGCCGAGAGACTGGTTTGAAAGAGTACAATGCACTCATAAGACTCTGCATAGAAACA +GCTAAAAAAAGCAACAATGAAGAAGTTTCGCTGCAACAGATTTACAAGGCTTATCAGCTT +TTCAAATCAATGAAGGAGCAGGGTTTTCAGATAGAAGATGAAACTTCTGGTCCATTTCTC +ACGTATCTGATTGACATGCATATGATAGAAGAGTTTTATTTTTTTCTTGAAATCATCAAA +GATGAGAATCCTAGATCATATGCAAGATTAGGTTACTATGAGATGCTGCTTTGGATAGAA +GTGGATAATGAAGACAAAGTTCATGAGCTTTTAGACCAGATTACTGCTGGGGATGGTGAA +GGGGCATCTGATTTACGA---------GAAAATTATTTGTTGGCTCTATGTGAAAGAGAC +AGGAGGAAGGAACTTTTGGAACTTTTAGAGGTTGTAGATGTAACTAAACTTTCATCG--- +GATAATGTAGTTAGAATTTTCAAGTCTTTGGGAAGGCTATCATTGCAGTCTTCTGCGGAG +AAGTTTATTTTGACATTGAAAACAAATGGTCATGGGGCTGAGAACATATCAGACTTCATC +TACTTCTATGCTACCAGCATTTCAAATTTAGCGGTTGAAGATACTGTTTTAAAGTACAAA +GGCATGCATGCAAAACTGGAGGTGTTGCCTACGTCTATCTCATATGAGAAACTTATTAAG +TTCTGTTGTCATTCACTCAAGGTGCATCTAGCTTTGGATGTAGCTGACCAAATGTGTCAA +GCAGGATTGACCATATCAACAGAAACACTTAATTACATCTCACAAGCATGTGAAGAAAGT +TGTGAGTTTAATTTGGTTCGTCGGATCTATTCAGTTCTCCATTCCCATAATTTGAAGCCA +GACAGTGAGACCTTCCGGAGTATGATAAATTTGAATGTCAGAATGAAAGATTATGATGGT +GCATATATCTTGCTGAAGGATTTGATGGAAATGAATTTAATGCCTACAGCAAGTATGTAC +AATGCCATAATGGCTGGCTATTTTCGAGAGAAAAACATTGTTGGCGGGTTGAGGGTTCTC +AACGAAATGGAAAAAGCAGATGTCAAACCAGATTCCCAGACTTACTGCTATCTCATAGGC +AACTCTGAATGTGAGGAAGATATTATTAAGTATTATGAAGAAATGATGTCTACTGGAGTC +CAAGTCACAAAGCATGTTTTCATGGCACTTGTAAATGCATATGCCACATGTGGCGAGTTT +GACAAGGCGAAACAGGTAGTATTAGACAAAGAAGTACCTGTAAAGAACTTAAATGAAATC +AAAAGTGCGCTTGTCTCTGCTCTTGCATGTCATGGGCAAATGTCTGATGCCCTTGCCATT +TATGACGAAATCAAACAGGGTGGTTGCAGTTTAGATCCGAAGGCTATTATATCTCTCATT +GAACACATGCAATCAGAAGGAGAATTGTCTAGATTACTTGAGCTGCTTGAGGAATTAAGT +---TGTCCAGGCTATTGGATTGATGGTTGCTTCAGAGTCATCTTATATTGTGTTAGAAAC +AAGCATTTAAGGCCTGCCATCGATTTGCTCAGGAAAATCTGGAATAAATTGCACGATGAT +GAAGTGGCAGGCGAAGTTCTTTTTGATGAGGTATTTTCCCAAATTGCGGAGATGGAACCC +CCAGATTTGCAGATTGGATTGGAATTGCTTGAAGCCATAAAGGAAGAGCTTAAACTTCGT +CCTTCACGGAAATGTCTGGATTTTCTTCTTAATGCTTGTGTCAATGCAAAGGATTCAAAG +AGTTCTCTTTTGATTTGGAAGGAATATGAAAAAGCTGGCCTGCCGCACAATGTTTTAAGC +TTCTTAAGGATGTATCAGGCCCTTTTGGCTTCTGGGGATTCAAAATCGGCTTCAAATTTA +CTGAACCGAATACCGAAAGAGGATTCTCATGTTCGTTCCGTCATCAGCGCATGCCAATCG +ACCTAC------GGT------------AAG---------AACCGTAAGAACGAGAAGAAA +AAGAAGAAT---AGTTGA +>s5 +------TCGTTAGTTCTTCTAGTTCTAGGGTTTCAAAATTATCGAAATTTCTTTTGGCAT +------------------------------TTTCTCTCT---------------TCATTT +TTTTTTTCCTTTTTGGTTCCCAAACCTCCTCTGACTCTC--------------------- +---------CCTCTTCCCCAATTTCTCATTTCTCGTTTTCCCTCCCTTCCTCCTCCTCCT +CCTCCTAGT---------------ACTACGATTGCTGATGACGCTGCCCTAAAGCAACAT +GTCTCCTTGCTG---------GTTGCTTCCTCTTCAACTCCCACTCCCGAAGCGACGGTG +ATGACGAAGACTGCGGAGTCTGGTGTCGGTGAGGCGAATAAACTGAAGGGTTCT------ +------------------------------------------------------------ +---------AAAAGGGAGCGAGTTGTTAACGAGGACTCCATTAGCTGTTTGCTCCTCCGA +AGCTTGAACCCAAGCACCGAGACGAATTCA------------------------------ +------------------------------------------------------------ +---------------------------------AAAGAGAGATCCGTGGAGAAGCAGCTT +GATCTACCATGGTTATCTAATTTGTTAAATATTGATGCCTTTCACCGTCGCAAAGAACTA +TCTCGTGAGCGAAAGCAGAAGTGGATATATAAGAATACACAAAATGTTCGGTTTTCATGG +TTAGTCAGAAAATGTGCCAAGAAGCTTGGAGTAGATGCTGCTATCCAGGTTTTTGGTAAA +TTACGCCCGGGAACTGGCAGAAAGGAGTATAACACACTTATAAGGCTATATATAGATACT +GCTAGGAAAGCTGAAGATGAAGAGGTTGCTTTGGATCAGAGTTACAGGGCTTATCAGCTC +TTCAAATTGATGAAGGAGGAAGGTTTCAATATAGAAGAGGAAACTTATGGTCCATTCCTC +ATTTATCTCATTGACATGCATATGACAGATGAATTCTATTTTTTTCTTCCTCTTATCAAA +GATGAGAATGCAAGTTCAATGGCAATGTTGGGGTACTATGAAATGTTGCTTTTGATAGAA +GTGGGTGATGAAGACAAAATTCATGAGCTCATCTCCAAACTCACCCATGAGAAATGTGAA +CATGACCCCAATCTACAAGCTCTTGCAGAAAATTATTTGTTAGCACTGGGTGAACGAGAC +AGGAAGAAGGAATTCTTACAACTCTTGCAGGTTATAGACATTACTAACCTTCCATTA--- +GACAATATTGGTAGGATTTTTAAATCCTTGGGCAGGCTGTCATTGCAATCTTTTGCTGAG +GATCTTATTTTGGCATTCAAAACAAATGATCAAGAGTTTGAAATCCTGTCAGACTTCATC +TATTTGTACTCTACCAGTGTGACAAATTTATCGGTTGAGGATGCCATTTTGAAGTACAAG +GACATGCATGCGAAGCTGGAGGTTCTGCCTTCATCCAAATCATATGAAGAGCTTATCAAG +TTCTGCTGTGGTTCACTGAAGGTGCATCTAGCTTTGGATGTGGCTGATCAGTTGTGTCAA +GCTGGATTGTCCTTATCAACAGAAACACTTAATACAATATCACGTGCATGTGAAGAAAGC +AGTGAGTTTTATCTGGTTCGCCAGATCTATTCAATTATCTGTTGTCATAACTTGAGCCCA +AATTCTGAAACATTCAGGAGCATGATAAATTCAAGTGTTAGAATGAAAGATTTTGATGGA +GCCTATGACATGCTGAAGGTGTCGGAAAAAAAGAACTTAATGCCTAGTGCAAGTATGTAC +AATGCTATAATGGGTGGCTACTTCAGAGAGGGAAACACTGTTTCCGGATTCGAGGTTCTC +AAACAAATGGAGAAGGCAAATGTGAAGCCAGATTGCATTACTTACAGCTATCTCATTGGA +AACTCGAAATGTGTGGATGATATCATTAAGTATTTTGAAGAAATGAAGACATCAAGTGTG +ACCCTGACGAAGCATGTTTTTATGGCAATGATAAATGCATATGTCACTTGTGGAGAGCTT +GAGAAGGCAAAACAGGTAGTCTTTGACAAAGCAGTTCCTGAAAAGAATGCAAATGAAATC +AGAAGTGCCCTTTTATCTGCTCTTGCATCAAATGGGAAAATTTCTGATGCTCTTGACATA +TATGAAGAAATCAAGCAGAGTGGTTCATCTGTGGAGCCAAAAGCCTTGATCTCTCTCTTG +GAACACATTCAAGTAGAGGGAGAACTGCCTAGATTACTTCAGTTCCTTGAGGAATTGAGT +---GACCCAGATTATTGGGCTGATGGTTGCTTCAGAGTCATATCATATTGCATCAGACAC +AAAGATATACAGTCTGCTGTTGATTTGCTGAAGAAACTCAAGGATGCATTTGATGATGAT +GAATTGGCAGGGGAAGTTCTTTTTGATGGGGTCTTTTGTCAAATTGCGGAGATGGAGCCT +TCAGGTTTACAAATTGGGCTTGAATTACTTCAATCAATAAAGGAAGACTTGAAGCTTCTT +CCTTCTAGGAAATGCCTGGACTTTTTACTGAGTGCTTGTGTCAAGGCAAAGGATGTAAGG +AGTTCTCTTATGATCTGGAAGGAATATCAAATGGCAGGCTTACCTTATAATCTTCTAACC +TTCTTGAGGATGTATCAGGCCCTTTTGACATCTGGGGATTTCAAATCTGCAGCAAAGATG +CAGGATAAATTACGGAAAAATGAGCACCATATTCATTCTATCGTTGTTGCTTGCGAAGAT +GCTTTC------AGCAAGCCTACTGAAAAA---------AATAAGGACACGGCTAGGAAA +AAGAAGAAA---TTTTAG +>s6 +CGATCTCCCCCTCCTCTGCCCCCATTCACCTACTCATCCCGAAATGAAATGCCAGCCTCT +------------------------------CACCTAAGC---------------TCACTC +TTCCGTTCC------ACCGTCAAATCCTCCGCCTCCGCC--------------------- +---------GCCGCCGCCGCCAGACTCTCTCAAAAACTCCCCTCTCCTCCGCCTCCTCCT +CCTCCTCCTATACCTGTTACTGTTGCGGCGATTAAAGAGGACGGAGCCCTAGAACAGTGC +AGCACCTTGCTC---------GAGGCTTCTTCGAAA------------------------ +---------------------------------------------------TCG------ +------------------------------------------------------------ +---------AAGCGA------------CGTGAGGATTTTGTTACTGATTTGGTGCTCCGT +AGCTTGAGCCCAGGGTTCGAGTCTATCTCTGAA------------------------GAT +TCAGCAAACCAAATACCAAATGAGCTATCGTCAATACTTTGTGGAACTAAAGATTTAGAG +TCCTCCCATTCTTCTGACATCCTAAAGGTTGACAATGAGAAATCTATGGAACAGCTACTT +AATCTACCATGGTTTTCTAGTTTGTTCCACACTGGCACCTCACTACGTCGCAAAAAACTC +TTTCGGGAACGGAAGCAGAAGTGGATCTTTAAGAATACACAAAAAGCTCGGTTTTCCTGC +TTGGTCACTAGGTGTGCACAGAAGCTGGGACCAGATGCTACCATCCAGGTATTTGGCAAA +TTAGGCAGAGAAACTGGAGTGAAAGAGTACAATGCTCTTATAAAGCTATGCATAGAAACT +GGTAGGAAAACCGACGATGAAGAGGTTGCAGTGGAGCAGTGTTACAAGGCTTATCAGCTC +TTCACTTGGATGAAAGAAGAAGGTTTTCAGATAGAGGAGCAAACCTATGGACCATTTCTC +ATGTATCTTATTGACATGCATTTGAAGGAAGAGTTCTACTTTTTTCTTCCGTTAATCAAA +GAT------ACAAGTTCATCGGCGAGGTTTGGCTACTATGAGATGCTGCTTTTTGTTGAA +ATTGACGATGAAGAAAAAATTCATGAGCTTATTAGTCAAATTACCCAGGAAAAATATGAA +AAGGACCTCAATCTACAAGGTCTTGCAAAAAATTATTTGTTGGCACTATGTGAAAGGGAT +AGGAAGAATGAGCTCTTGGACCTCTTGGAAGTTGTAGACATTACGAAACTTCCACCG--- +GAAAGTATTGGTAGCATTTTGAAATCCCTGGGGAGGCTCTCATTGCAGTCCTTTGCAGAG +AAGTTCATTCTGGCATCCAAAGAAGATGGTAAAGGGTCCGAATGTATATCAGACTTCATC +TGTTTGTTCACTACCAGCATGACAAACTTTGTGGTTGAAGATATCATTCTAAAGTACAAG +GACATGCACACGAAGCTGGAGGTTTTGCCTTCTTCTGAATCATATGAGAAGCTTATCAAA +TTCTGCTGTGGTTCACACAAGGTGCACCTTGCTTTGGATGTGGTTGATGAGATGTGTGAA +GCCGGGTTTTCTTTGTCAACAGATACGCTTAACTCTGTACTGCATGCGTGTGAAGAAAGC +AGTGAGTTTTGTCTGGTTCGCCGGATATATTCAGCTCTCTGTTATCACAAGTTGATGCCG +AATAGTGAAACATTCAGAAGCATGATAAACTTATTCGTTAGAATGAAAGATTTTAATAGA +GCATATGACATGCTGACGGAGTTGGAGAAAGTGAACTTAATGCCTACGACTAGTATGTAC +AACACTATAATGGGTGGCTACTTCAGAGAGGGAAACACTGTCAACGGTTTTAAGGTTTTG +AAAGAAATGGAGAAGGCCGATGTCAAGCCAGATTGCCAGACTTATGGCTATCTTATTAAC +AACTCAGAACGCGAGGAAGATATCATCAAGTATTATGATGAAATGAAGTCGTCAGGAGTG +ACCTTGACAAAGCATGTTTTCATGGCACTGATAAATGCATATGCCAATCGTGGAGAATTT +GAGAAGGCAAAGCAGGTAGTTTTTGACAAAGGAGTACCTCTGAAGAACATAAATGAAATT +AGAAGTGCCCTTGTGTCTGCTCTTGCATCACATGGTAAAATATCTGATGCCTTTGACGTA +TATGAACAAATCAGGCAAAGTGGTTCAACTGTAGAGCCAAAGGCCTTGGTCTCTCTCGTG +GAATTCACTGAATCAGAAGGACAACTGCCTAGATTACTTCAGATTATGGAGGAACTGACT +ACTGATCTAGTTTATTGGATTGATGGTTGTTGCAGAGTCATTTTGTATTGCATAAGACAC +AAAGATATAAGGTCTGCGGTTGATTTGTTAAAGAAGCTCAAGGACGCGTTTAATGATGAT +GAACTGGCTGGTGAAGTTCTTTTTGATGAGGTCTTTTCTCAAGTTGCAGAGATGGAGCCA +TCAGGTTTACGATTGGGCCTTGACTTGCTTCAAACAATCAAGAAAGAACTTAAAATTCGT +CCTTCTAGGAAATGCCTAGATTTTTTACTTAGTGCTTGTGCTGACGCAAAGGATGCAAAG +AGTGCCCTCTTGATATGGAAGGAATACGAAATGGCTGGCCTACCTTACAATCTTGTTACC +TCCTTAAAGATGTATCAGGCCCTTATGGCATCTAGAGACTTTGAGTCGGCTGCTAAGGTG +CTGACTAGAATACCAGTAGATGACTCCCATGTCCGATCTATCCTCTTTGCTTGTGAAGCT +ACTTAT------GGTATTCCTACTAAAAAAGGTACCAGCAACAAGATGATTAGGACACTG +AAGATGAAA---GTTTAG diff --git a/example_files/manuscript_example/test0.fa b/example_files/manuscript_example/test0.fa new file mode 100644 index 0000000..09b8f22 --- /dev/null +++ b/example_files/manuscript_example/test0.fa @@ -0,0 +1,306 @@ +>s1 +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +---------------------------------------------atgacaaactgggat +ctcgatgatccatctgcctctgaagtggctagtcatggcaaagcattggaggatgattct +aacttgccttggtttactactttgttcaatagcagcacaccactgcgtcgtaaagagtta +tctcaggatcgaaagaataaatggatcttcaagaacacccaaaagctacgttttgataag +ttggttaatttgtgctcggataaagtcggatcaggttcaacttttgacgtgttatataaa +ttaggtcgagggacaggtttgaaagagtataatgctttcataaaaacttgcttagagaca +gcaagaaattgtaatgatgagaaggtccagatggagcatattttgcaggcataccgactg +cttcgattaatgaaggaacgaggttttccaatagaagaggaggcatttggcccattttta +atgttactaattgacatgcatatggatgatcaatttttaatccttcttgagattatcaaa +gatgaagatcctagtttacatccacgattaggctactatgagatgcatttttggattgag +atgaataatgaagaaaaggttcatgagttttgccaacgtatttcttctggtgagagtgaa +atgggatccttattgcac---------gaaaattatttgttggcactgtgtgaaagagat +aggaagaaggagcttcttcagttgctagacatcatagacataaccagagtgtcgtcattg +gataatgtagctagcattttcagatccctggggcggctatcattggaagcttttgcagag +ttgtttgttttggtattgaaagattgcggtcataaggcccaaagtatttcagatttgatc +tactcctatgcgtctagctcaaaaaataca------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +---------------acg +>s2 +------------------------------------------------atgccccgcacc +aacgtc---------------------aaaattctcagc---------------accctc +tttcgcacc------gccgttaaagtaacctcctctgctccttccatcgttaaagacgcc +gttacttccactaaaaaaaagaaattacgctctcaccctccccctcctccacctccacct +ccacctcct---------------cctcct------------------------------ +---------------------cctcctccttcttca------------------------ +---------------------------------------------------ggg------ +------------------------------------------------------------ +---------gtaaaa---------------------------tcgtctttgcgcaagaaa +cctcctcaacaaaattatcaaacttcctccaacacctctaatccccttccagaaggagat +tcagttgagcaagcaacacatggcatatcttcaatattgtgtggtaccacagactgggaa +atcgatgatccatctgacacggaagtggctaatgatgacaaggcattagaagatgattct +gacttgccttggttttccaatctttttaatagcagtatgtcactgcgtcgtaaagagtta +tctcgggatcgaaaaaataaatggattttcaagaacacccaaaagctacgttttgataag +ttggttaatatgtgcttagataaagtgggatcaggttcaacttttcatgtgttatataaa +ttaggtcgagggacaggtttgaaagagtataatgctttcataaaaggttgcatagagaca +gctagaaatagcaaagatgaattgtttcaggtacaacagatcttggaggcatatcggctg +cttcaattgatgaaggaacggggttttccaatagaagaggatgcatttggcccatttttc +ttgtatctaattgacatgcatatggatgaacagttttcacttcttcttgagattgttaaa +gaggaggatcctaatttacatccacgattaggctactatgagatgcttttttggattgag +atgaataacgaagaaaaggttcaggagctttgccagcagattgccactggtgagagcgaa +ttgggaacattattgcat---------gaaaattatttgttggcactgtgtgaaagagat +agaaagaaggagcttcttcagttgctagacatcatagacataaccagagtttcctcgttg +gataatgtagctagcatatttagatctcttgggcggctatcattggaagcttttgcagag +ttgtttgtcttggtattgaaagattgtgatcacagggctgaaagtatttcagatttaatc +tactcttatgcatctagcttgagaaatacatcggttgaggaagttattttgaaattcaaa +gagatgcatggaaaaatggatcttgctcttttggctggatcatatgagaaactcattgat +ttttgtcttgattccactaaggtctatatggctttggatttagttgatgagatgtgtgaa +gcaggtttatccttatccacgggagcactcaatgccatatgtcatgcctgtgaggagagc +tgtgaatatatgctggctcgtcggatctataaaatgctctgtgaccacaaattgaagcca +aatactgagacgttcagaagtattataaacttgaacgttagaatgaaagattttgataat +gcatatgccgtgttaaaagatttgggaaagatgaatttggtgccttcagcaagtatgtac +aatgctatattggctggttgttatagagagaaaaacaagaatggtgtgctcagggttctc +aaagaaatgaaagatgcggatgtcaaaccagattctcagactttcagctatctgataagc +aactgtgcatgtgaagaagacattattaagtattatgaacaactggaggatgttggtgtt +aatccaacaaagcaagttttcatggcactcataaatgcatatgctgcaactggccaattt +gagaaggccaaggaggttgtcaaagagaaaggaatacttacgaagaacttgcatgaaatc +aaaagtactcttgtctcgtctctggcatcacatggaaaaatgtctgatgcactggccatt +tacaaggaaatgaaaaagaatggtttctctttggagccaaaggccgttatatctctcatc +gaaaaccagcattataaaggagacttgaaggtattgctcagcttgcttgaagatttgaat +---gatccacaatattggattgatggttgctgcagacttatcttgtactgtgttcggaac +aaggaattgaggactgctgttgatttgttgaaaaaactttctgataattgtcgggatgat +gatttggctagagaagttatttttgatgaggtattttcacacattgcggattcagagcat +cctgatttgcagatcggaatagacttgctccaagctattaaggaggatctgaagttgtac +ccttcacgaaaatgtctggattttctacttagtgcttgtgttaatgggaaggatctccag +aaagcccgattggtgtggaaggagtataagataaatggtcttccatacaacattttaagc +tacttgaggatgtaccaggcattcctgatttcaggagatgcagcagcagccaaacatttt +ctgagtaaaataccgaaagatgatccacatgttctgtctgtgcttcacgcgtgccgtgta +acctat------gcaaagcccaaggaggaa---------aaaaagaaggaaaagaaaaag +aaaaagaagaaaaaaaca +>s3 +------------------------------------------CCAAAAACGCCACTTGAT +CCTGCGGCAGAGATAAAGCAGCGCCTCAAAACCCTGACATTGCGATCGAAGAAAGCAGTC +CTAAAGCAG------AGCGTCCAG---ACCGCCCTTCCT--------------------- +---------GCAGTTTCCGTTGATATAACATCCAAGACAGAAGCGCCAAGTCTTCCTGTG +------------------------------------AAGAATGAAACTCTAAAGCAGTTT +GTCTGTTTGATA---------AACCCTGTTTCTTCG------------------------ +---------------------------------------------------TCG------ +------------------------------------------------------------ +---------TCCCAG------------CAC------TCGTTCCAGGATGAACTTATGCGT +AGCTTTACTGACGGT---------TCGTCAAAT------------------------GGT +TCAGCCAAGATAGTAACAAATGAGATATCTGCAATATTATGCGGTGGCAAGTATGCAGAG +AGTGTTTGTTCCATTGACTTA---GAGGTTGAAAGTGATAAACCTATTGAAAAGGAACTT +GAGCTACCATGGTTTGCGACTATGTGTCATAGTGGTGAATCATCATGCCGGAAAGAAGTT +TCTCGTGAGCGGAAGCAGAAATGGATCTTCAAGAATACCCAACAAAGTTGGTTTCAAAAG +CTGATAATAATGTGTGGTGAAAAACTGGGTTCAGATGCTATCATGAAGATGCTTGCTAGA +TTAGGCCGGGAGACTGGTCTAAAAGAATACAGTGCATATATAAGACTTTGTGTAGAAACT +GCTAGGAAAACTGAAGATGAAGAAGTCCAGTTGGAGCAGACTTATCTAGCTTATCAGCTT +TTCAGAAAAATGAAGGAAGCCGGACTTCCTATGGAGGAGGAAACTTATAGCCCATTTCTT +ATGTATCTGATTGATATGCGGATGGAAGAGGAGTTCTATTTTTTCCTTGCAGTCATCAAA +GATGAGGATTCTACTTGCAATGCAAGATTTTGCTATTATGAATTACTGCTCTTGATTGAC +GTGGGCAATGAAAACAAAATTCACGAGCTTATTCATCAGGTTACTGCAGGGGATACTGAA +GGGCGATCTGCAATACAA---------GAAAATTATCTGTTGGCATTATGCCAAAGGGAC +AGGAAGAATGAACTTTTGGAACTGTTGGAAACTATTGATGTTACTGGTCTTTCATCA--- +GCCACAGCAGTTAGTGTTTTCAAATCCCTGGGGAGGCTAGAACTGCAGCCTTTTGCAGAG +AAGTTTATTTTGACATTCAAGGCAAGCGGTCATGGGGCTGAAAGCATATCAGACTTCATC +TTTTCCTATGTTACTAGCATGAAAAAACTAGCGGTTGAGGATATGATATTGAAGTATGAA +GACATGCATACAAAAGCAGATATTTTGCCTTCATCTACACTCTATGAGAAGCTTATTAAT +TTCGCTTGTAGTTCTCTTGAGGTACATTCTGCTTTGGATCTGGCGGATCGGATGTGTGAA +GCAGGATTTACCATATCAGCCGAAACAGTTAATGGCATCTTACATGCATGCGAAGAAAGC +TATGACTATGATTTGGTTGGACGAATATATTCGGTTCTCTCACGCCACAACTTGAAGCCA +GATAGTGAGACCTTCGAGAGCATGGTTAATTTGTGTGTTAGAATAAGAGATTATGCCGGT +GCTCGCAAAATGCTGAACGAATCGGAGAAAAGGAATCTAGGTCCTACGGCCACTATGTAC +AATGCTATAATGGGCGGCTTTTACCGCGAGAAGAATGTCGTCGGAGCGTTGGCAGTTCGT +AGAGATATGGAAAAGAAAAACGTGAAACCTGATCCTCACACCTACTCTTACCTCATTGGC +AACTCTGAGTGCTTGGAAGATGTTATCAAGTACTACGAGGAAATGAAGTCCACAGGAGTC +CAAGTTACAAAAATTGTGTACATGGCACTTATAAATGCCTATGCTGCTTGTGGAGACTTT +GAGAAAGCCAAAAAGGTAGTCCTGGACAACGGAATACCCAAAAGGAACTTAAATGAAGTC +AGAAGTGCGCTTGTTTCTGCTCTTGCATCACATGGTCGAATGTCTGATGCTCTTGAGATT +TATGATAAAGTGAAGCAAATTGGTTTCAGTTTAGAGCCAAAAGCCATCATATCTCTCATC +GAATACATGCAACCAGAA---GAACTGGGCAGACTATTCAACTTGATTGACGAACTGAGG +---GATCGATACTATTGGGTAGATGCTTGCTTCAGAGGCATTGCTCTTTGTGTTAGAAAC +AAAAAACTAAGGTCTGCTATTGACTTGATTAAGAAGCTCTTGAATAAATTGCATGATGAG +AAATTTGCAGTTGAATTTCTTCTTGATGAGGTATTCTTCCAAATTGCAGAGCTGGAGCCT +CCAGATCTGCAGATTGGTTTAGACCTGCTTACGGCGATAAAGGAAGAGCTTAAGCTTCAG +CCTTCAAGGAAGTCTCTGGATTTTCTGCTTAGTGTTTGTGTCAACACAAAGGATGTGAGG +AGTTCACATCTGATATGGGAGGAGTACCAAAAGGCAGGGTTTCCTTACAATGTTCTAAGC +TTCCTAAGGATGTATCAGGCACTCCTGGCTGCAGGTGATTTAACATCTGCTGCAAAAGTG +CTAAATAGAATGCCGAAAGATGATGTCCATGTCCGAATGCTCATCAGCTCATATCAGTCT +ACTTACATGTCTGCT------------AGA---------AATGGCAAGAAAGAGAAGATA +AAGTTGAGTTTGAAATGA +>s4 +---------------------------------------------GAAATGCCCGCCTCA +GGAGCC---------------------AAAAACCTAAGC---------------TCATTG +TTCCGCTCC------GCCGTTAAA---ACCGCCACCGCC--------------------- +---------GCTAAACCAGCTAAGAAAACTTCC---------------------CCACCG +------------------------------------GAGGACACAGCCCTGAAGCAATAC +CTCTCTCTGCTCGGAACTTCATCCCCGATCACGTCT------------------------ +---------------------------------------------------ACTTTAAAA +TCGGCACCACATAAACCTCAGCTCTCTGAGAAGCCACCGAACTCATCACTTCCTCAGTCG +AAGCGAGAGACTAAA------------CAC------TCAGTCAGTGATTTGGTCCTCCTA +AGCCCGAAACAAGGAGCCACAAAGAGCCCTGAG------------------------GAT +TCAGCAAAGGAGATATCCAGAGAGATATCGGCAATATTGTGTGGTAGCAGAGACTTGGAT +TCGTCT---------GACTTACGAGAGGCTGACACAAGGAAACCTATAGAAAAGGTTCTT +GAGCTGCCATGGTTTTCAAATTTGTGTCACAACGGCACATCATTGCGTCGAAAAGAGATA +TCACGGCGACGGAAACAAAAATGGATATTCAAGAATACCCAAAAAAATTGGTTTGGCCGG +TTGGTGACAATGTGTGCAGAAAAACTTGGTGCAGATGCTACTATTCAGGTATTTGGTAAA +TTAGGCCGAGAGACTGGTTTGAAAGAGTACAATGCACTCATAAGACTCTGCATAGAAACA +GCTAAAAAAAGCAACAATGAAGAAGTTTCGCTGCAACAGATTTACAAGGCTTATCAGCTT +TTCAAATCAATGAAGGAGCAGGGTTTTCAGATAGAAGATGAAACTTCTGGTCCATTTCTC +ACGTATCTGATTGACATGCATATGATAGAAGAGTTTTATTTTTTTCTTGAAATCATCAAA +GATGAGAATCCTAGATCATATGCAAGATTAGGTTACTATGAGATGCTGCTTTGGATAGAA +GTGGATAATGAAGACAAAGTTCATGAGCTTTTAGACCAGATTACTGCTGGGGATGGTGAA +GGGGCATCTGATTTACGA---------GAAAATTATTTGTTGGCTCTATGTGAAAGAGAC +AGGAGGAAGGAACTTTTGGAACTTTTAGAGGTTGTAGATGTAACTAAACTTTCATCG--- +GATAATGTAGTTAGAATTTTCAAGTCTTTGGGAAGGCTATCATTGCAGTCTTCTGCGGAG +AAGTTTATTTTGACATTGAAAACAAATGGTCATGGGGCTGAGAACATATCAGACTTCATC +TACTTCTATGCTACCAGCATTTCAAATTTAGCGGTTGAAGATACTGTTTTAAAGTACAAA +GGCATGCATGCAAAACTGGAGGTGTTGCCTACGTCTATCTCATATGAGAAACTTATTAAG +TTCTGTTGTCATTCACTCAAGGTGCATCTAGCTTTGGATGTAGCTGACCAAATGTGTCAA +GCAGGATTGACCATATCAACAGAAACACTTAATTACATCTCACAAGCATGTGAAGAAAGT +TGTGAGTTTAATTTGGTTCGTCGGATCTATTCAGTTCTCCATTCCCATAATTTGAAGCCA +GACAGTGAGACCTTCCGGAGTATGATAAATTTGAATGTCAGAATGAAAGATTATGATGGT +GCATATATCTTGCTGAAGGATTTGATGGAAATGAATTTAATGCCTACAGCAAGTATGTAC +AATGCCATAATGGCTGGCTATTTTCGAGAGAAAAACATTGTTGGCGGGTTGAGGGTTCTC +AACGAAATGGAAAAAGCAGATGTCAAACCAGATTCCCAGACTTACTGCTATCTCATAGGC +AACTCTGAATGTGAGGAAGATATTATTAAGTATTATGAAGAAATGATGTCTACTGGAGTC +CAAGTCACAAAGCATGTTTTCATGGCACTTGTAAATGCATATGCCACATGTGGCGAGTTT +GACAAGGCGAAACAGGTAGTATTAGACAAAGAAGTACCTGTAAAGAACTTAAATGAAATC +AAAAGTGCGCTTGTCTCTGCTCTTGCATGTCATGGGCAAATGTCTGATGCCCTTGCCATT +TATGACGAAATCAAACAGGGTGGTTGCAGTTTAGATCCGAAGGCTATTATATCTCTCATT +GAACACATGCAATCAGAAGGAGAATTGTCTAGATTACTTGAGCTGCTTGAGGAATTAAGT +---TGTCCAGGCTATTGGATTGATGGTTGCTTCAGAGTCATCTTATATTGTGTTAGAAAC +AAGCATTTAAGGCCTGCCATCGATTTGCTCAGGAAAATCTGGAATAAATTGCACGATGAT +GAAGTGGCAGGCGAAGTTCTTTTTGATGAGGTATTTTCCCAAATTGCGGAGATGGAACCC +CCAGATTTGCAGATTGGATTGGAATTGCTTGAAGCCATAAAGGAAGAGCTTAAACTTCGT +CCTTCACGGAAATGTCTGGATTTTCTTCTTAATGCTTGTGTCAATGCAAAGGATTCAAAG +AGTTCTCTTTTGATTTGGAAGGAATATGAAAAAGCTGGCCTGCCGCACAATGTTTTAAGC +TTCTTAAGGATGTATCAGGCCCTTTTGGCTTCTGGGGATTCAAAATCGGCTTCAAATTTA +CTGAACCGAATACCGAAAGAGGATTCTCATGTTCGTTCCGTCATCAGCGCATGCCAATCG +ACCTAC------GGT------------AAG---------AACCGTAAGAACGAGAAGAAA +AAGAAGAAT---AGTTGA +>s5 +------TCGTTAGTTCTTCTAGTTCTAGGGTTTCAAAATTATCGAAATTTCTTTTGGCAT +------------------------------TTTCTCTCT---------------TCATTT +TTTTTTTCCTTTTTGGTTCCCAAACCTCCTCTGACTCTC--------------------- +---------CCTCTTCCCCAATTTCTCATTTCTCGTTTTCCCTCCCTTCCTCCTCCTCCT +CCTCCTAGT---------------ACTACGATTGCTGATGACGCTGCCCTAAAGCAACAT +GTCTCCTTGCTG---------GTTGCTTCCTCTTCAACTCCCACTCCCGAAGCGACGGTG +ATGACGAAGACTGCGGAGTCTGGTGTCGGTGAGGCGAATAAACTGAAGGGTTCT------ +------------------------------------------------------------ +---------AAAAGGGAGCGAGTTGTTAACGAGGACTCCATTAGCTGTTTGCTCCTCCGA +AGCTTGAACCCAAGCACCGAGACGAATTCA------------------------------ +------------------------------------------------------------ +---------------------------------AAAGAGAGATCCGTGGAGAAGCAGCTT +GATCTACCATGGTTATCTAATTTGTTAAATATTGATGCCTTTCACCGTCGCAAAGAACTA +TCTCGTGAGCGAAAGCAGAAGTGGATATATAAGAATACACAAAATGTTCGGTTTTCATGG +TTAGTCAGAAAATGTGCCAAGAAGCTTGGAGTAGATGCTGCTATCCAGGTTTTTGGTAAA +TTACGCCCGGGAACTGGCAGAAAGGAGTATAACACACTTATAAGGCTATATATAGATACT +GCTAGGAAAGCTGAAGATGAAGAGGTTGCTTTGGATCAGAGTTACAGGGCTTATCAGCTC +TTCAAATTGATGAAGGAGGAAGGTTTCAATATAGAAGAGGAAACTTATGGTCCATTCCTC +ATTTATCTCATTGACATGCATATGACAGATGAATTCTATTTTTTTCTTCCTCTTATCAAA +GATGAGAATGCAAGTTCAATGGCAATGTTGGGGTACTATGAAATGTTGCTTTTGATAGAA +GTGGGTGATGAAGACAAAATTCATGAGCTCATCTCCAAACTCACCCATGAGAAATGTGAA +CATGACCCCAATCTACAAGCTCTTGCAGAAAATTATTTGTTAGCACTGGGTGAACGAGAC +AGGAAGAAGGAATTCTTACAACTCTTGCAGGTTATAGACATTACTAACCTTCCATTA--- +GACAATATTGGTAGGATTTTTAAATCCTTGGGCAGGCTGTCATTGCAATCTTTTGCTGAG +GATCTTATTTTGGCATTCAAAACAAATGATCAAGAGTTTGAAATCCTGTCAGACTTCATC +TATTTGTACTCTACCAGTGTGACAAATTTATCGGTTGAGGATGCCATTTTGAAGTACAAG +GACATGCATGCGAAGCTGGAGGTTCTGCCTTCATCCAAATCATATGAAGAGCTTATCAAG +TTCTGCTGTGGTTCACTGAAGGTGCATCTAGCTTTGGATGTGGCTGATCAGTTGTGTCAA +GCTGGATTGTCCTTATCAACAGAAACACTTAATACAATATCACGTGCATGTGAAGAAAGC +AGTGAGTTTTATCTGGTTCGCCAGATCTATTCAATTATCTGTTGTCATAACTTGAGCCCA +AATTCTGAAACATTCAGGAGCATGATAAATTCAAGTGTTAGAATGAAAGATTTTGATGGA +GCCTATGACATGCTGAAGGTGTCGGAAAAAAAGAACTTAATGCCTAGTGCAAGTATGTAC +AATGCTATAATGGGTGGCTACTTCAGAGAGGGAAACACTGTTTCCGGATTCGAGGTTCTC +AAACAAATGGAGAAGGCAAATGTGAAGCCAGATTGCATTACTTACAGCTATCTCATTGGA +AACTCGAAATGTGTGGATGATATCATTAAGTATTTTGAAGAAATGAAGACATCAAGTGTG +ACCCTGACGAAGCATGTTTTTATGGCAATGATAAATGCATATGTCACTTGTGGAGAGCTT +GAGAAGGCAAAACAGGTAGTCTTTGACAAAGCAGTTCCTGAAAAGAATGCAAATGAAATC +AGAAGTGCCCTTTTATCTGCTCTTGCATCAAATGGGAAAATTTCTGATGCTCTTGACATA +TATGAAGAAATCAAGCAGAGTGGTTCATCTGTGGAGCCAAAAGCCTTGATCTCTCTCTTG +GAACACATTCAAGTAGAGGGAGAACTGCCTAGATTACTTCAGTTCCTTGAGGAATTGAGT +---GACCCAGATTATTGGGCTGATGGTTGCTTCAGAGTCATATCATATTGCATCAGACAC +AAAGATATACAGTCTGCTGTTGATTTGCTGAAGAAACTCAAGGATGCATTTGATGATGAT +GAATTGGCAGGGGAAGTTCTTTTTGATGGGGTCTTTTGTCAAATTGCGGAGATGGAGCCT +TCAGGTTTACAAATTGGGCTTGAATTACTTCAATCAATAAAGGAAGACTTGAAGCTTCTT +CCTTCTAGGAAATGCCTGGACTTTTTACTGAGTGCTTGTGTCAAGGCAAAGGATGTAAGG +AGTTCTCTTATGATCTGGAAGGAATATCAAATGGCAGGCTTACCTTATAATCTTCTAACC +TTCTTGAGGATGTATCAGGCCCTTTTGACATCTGGGGATTTCAAATCTGCAGCAAAGATG +CAGGATAAATTACGGAAAAATGAGCACCATATTCATTCTATCGTTGTTGCTTGCGAAGAT +GCTTTC------AGCAAGCCTACTGAAAAA---------AATAAGGACACGGCTAGGAAA +AAGAAGAAA---TTTTAG +>s6 +CGATCTCCCCCTCCTCTGCCCCCATTCACCTACTCATCCCGAAATGAAATGCCAGCCTCT +------------------------------CACCTAAGC---------------TCACTC +TTCCGTTCC------ACCGTCAAATCCTCCGCCTCCGCC--------------------- +---------GCCGCCGCCGCCAGACTCTCTCAAAAACTCCCCTCTCCTCCGCCTCCTCCT +CCTCCTCCTATACCTGTTACTGTTGCGGCGATTAAAGAGGACGGAGCCCTAGAACAGTGC +AGCACCTTGCTC---------GAGGCTTCTTCGAAA------------------------ +---------------------------------------------------TCG------ +------------------------------------------------------------ +---------AAGCGA------------CGTGAGGATTTTGTTACTGATTTGGTGCTCCGT +AGCTTGAGCCCAGGGTTCGAGTCTATCTCTGAA------------------------GAT +TCAGCAAACCAAATACCAAATGAGCTATCGTCAATACTTTGTGGAACTAAAGATTTAGAG +TCCTCCCATTCTTCTGACATCCTAAAGGTTGACAATGAGAAATCTATGGAACAGCTACTT +AATCTACCATGGTTTTCTAGTTTGTTCCACACTGGCACCTCACTACGTCGCAAAAAACTC +TTTCGGGAACGGAAGCAGAAGTGGATCTTTAAGAATACACAAAAAGCTCGGTTTTCCTGC +TTGGTCACTAGGTGTGCACAGAAGCTGGGACCAGATGCTACCATCCAGGTATTTGGCAAA +TTAGGCAGAGAAACTGGAGTGAAAGAGTACAATGCTCTTATAAAGCTATGCATAGAAACT +GGTAGGAAAACCGACGATGAAGAGGTTGCAGTGGAGCAGTGTTACAAGGCTTATCAGCTC +TTCACTTGGATGAAAGAAGAAGGTTTTCAGATAGAGGAGCAAACCTATGGACCATTTCTC +ATGTATCTTATTGACATGCATTTGAAGGAAGAGTTCTACTTTTTTCTTCCGTTAATCAAA +GAT------ACAAGTTCATCGGCGAGGTTTGGCTACTATGAGATGCTGCTTTTTGTTGAA +ATTGACGATGAAGAAAAAATTCATGAGCTTATTAGTCAAATTACCCAGGAAAAATATGAA +AAGGACCTCAATCTACAAGGTCTTGCAAAAAATTATTTGTTGGCACTATGTGAAAGGGAT +AGGAAGAATGAGCTCTTGGACCTCTTGGAAGTTGTAGACATTACGAAACTTCCACCG--- +GAAAGTATTGGTAGCATTTTGAAATCCCTGGGGAGGCTCTCATTGCAGTCCTTTGCAGAG +AAGTTCATTCTGGCATCCAAAGAAGATGGTAAAGGGTCCGAATGTATATCAGACTTCATC +TGTTTGTTCACTACCAGCATGACAAACTTTGTGGTTGAAGATATCATTCTAAAGTACAAG +GACATGCACACGAAGCTGGAGGTTTTGCCTTCTTCTGAATCATATGAGAAGCTTATCAAA +TTCTGCTGTGGTTCACACAAGGTGCACCTTGCTTTGGATGTGGTTGATGAGATGTGTGAA +GCCGGGTTTTCTTTGTCAACAGATACGCTTAACTCTGTACTGCATGCGTGTGAAGAAAGC +AGTGAGTTTTGTCTGGTTCGCCGGATATATTCAGCTCTCTGTTATCACAAGTTGATGCCG +AATAGTGAAACATTCAGAAGCATGATAAACTTATTCGTTAGAATGAAAGATTTTAATAGA +GCATATGACATGCTGACGGAGTTGGAGAAAGTGAACTTAATGCCTACGACTAGTATGTAC +AACACTATAATGGGTGGCTACTTCAGAGAGGGAAACACTGTCAACGGTTTTAAGGTTTTG +AAAGAAATGGAGAAGGCCGATGTCAAGCCAGATTGCCAGACTTATGGCTATCTTATTAAC +AACTCAGAACGCGAGGAAGATATCATCAAGTATTATGATGAAATGAAGTCGTCAGGAGTG +ACCTTGACAAAGCATGTTTTCATGGCACTGATAAATGCATATGCCAATCGTGGAGAATTT +GAGAAGGCAAAGCAGGTAGTTTTTGACAAAGGAGTACCTCTGAAGAACATAAATGAAATT +AGAAGTGCCCTTGTGTCTGCTCTTGCATCACATGGTAAAATATCTGATGCCTTTGACGTA +TATGAACAAATCAGGCAAAGTGGTTCAACTGTAGAGCCAAAGGCCTTGGTCTCTCTCGTG +GAATTCACTGAATCAGAAGGACAACTGCCTAGATTACTTCAGATTATGGAGGAACTGACT +ACTGATCTAGTTTATTGGATTGATGGTTGTTGCAGAGTCATTTTGTATTGCATAAGACAC +AAAGATATAAGGTCTGCGGTTGATTTGTTAAAGAAGCTCAAGGACGCGTTTAATGATGAT +GAACTGGCTGGTGAAGTTCTTTTTGATGAGGTCTTTTCTCAAGTTGCAGAGATGGAGCCA +TCAGGTTTACGATTGGGCCTTGACTTGCTTCAAACAATCAAGAAAGAACTTAAAATTCGT +CCTTCTAGGAAATGCCTAGATTTTTTACTTAGTGCTTGTGCTGACGCAAAGGATGCAAAG +AGTGCCCTCTTGATATGGAAGGAATACGAAATGGCTGGCCTACCTTACAATCTTGTTACC +TCCTTAAAGATGTATCAGGCCCTTATGGCATCTAGAGACTTTGAGTCGGCTGCTAAGGTG +CTGACTAGAATACCAGTAGATGACTCCCATGTCCGATCTATCCTCTTTGCTTGTGAAGCT +ACTTAT------GGTATTCCTACTAAAAAAGGTACCAGCAACAAGATGATTAGGACACTG +AAGATGAAA---GTTTAG diff --git a/example_files/manuscript_example/test1.fa b/example_files/manuscript_example/test1.fa new file mode 100644 index 0000000..09b8f22 --- /dev/null +++ b/example_files/manuscript_example/test1.fa @@ -0,0 +1,306 @@ +>s1 +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +---------------------------------------------atgacaaactgggat +ctcgatgatccatctgcctctgaagtggctagtcatggcaaagcattggaggatgattct +aacttgccttggtttactactttgttcaatagcagcacaccactgcgtcgtaaagagtta +tctcaggatcgaaagaataaatggatcttcaagaacacccaaaagctacgttttgataag +ttggttaatttgtgctcggataaagtcggatcaggttcaacttttgacgtgttatataaa +ttaggtcgagggacaggtttgaaagagtataatgctttcataaaaacttgcttagagaca +gcaagaaattgtaatgatgagaaggtccagatggagcatattttgcaggcataccgactg +cttcgattaatgaaggaacgaggttttccaatagaagaggaggcatttggcccattttta +atgttactaattgacatgcatatggatgatcaatttttaatccttcttgagattatcaaa +gatgaagatcctagtttacatccacgattaggctactatgagatgcatttttggattgag +atgaataatgaagaaaaggttcatgagttttgccaacgtatttcttctggtgagagtgaa +atgggatccttattgcac---------gaaaattatttgttggcactgtgtgaaagagat +aggaagaaggagcttcttcagttgctagacatcatagacataaccagagtgtcgtcattg +gataatgtagctagcattttcagatccctggggcggctatcattggaagcttttgcagag +ttgtttgttttggtattgaaagattgcggtcataaggcccaaagtatttcagatttgatc +tactcctatgcgtctagctcaaaaaataca------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +---------------acg +>s2 +------------------------------------------------atgccccgcacc +aacgtc---------------------aaaattctcagc---------------accctc +tttcgcacc------gccgttaaagtaacctcctctgctccttccatcgttaaagacgcc +gttacttccactaaaaaaaagaaattacgctctcaccctccccctcctccacctccacct +ccacctcct---------------cctcct------------------------------ +---------------------cctcctccttcttca------------------------ +---------------------------------------------------ggg------ +------------------------------------------------------------ +---------gtaaaa---------------------------tcgtctttgcgcaagaaa +cctcctcaacaaaattatcaaacttcctccaacacctctaatccccttccagaaggagat +tcagttgagcaagcaacacatggcatatcttcaatattgtgtggtaccacagactgggaa +atcgatgatccatctgacacggaagtggctaatgatgacaaggcattagaagatgattct +gacttgccttggttttccaatctttttaatagcagtatgtcactgcgtcgtaaagagtta +tctcgggatcgaaaaaataaatggattttcaagaacacccaaaagctacgttttgataag +ttggttaatatgtgcttagataaagtgggatcaggttcaacttttcatgtgttatataaa +ttaggtcgagggacaggtttgaaagagtataatgctttcataaaaggttgcatagagaca +gctagaaatagcaaagatgaattgtttcaggtacaacagatcttggaggcatatcggctg +cttcaattgatgaaggaacggggttttccaatagaagaggatgcatttggcccatttttc +ttgtatctaattgacatgcatatggatgaacagttttcacttcttcttgagattgttaaa +gaggaggatcctaatttacatccacgattaggctactatgagatgcttttttggattgag +atgaataacgaagaaaaggttcaggagctttgccagcagattgccactggtgagagcgaa +ttgggaacattattgcat---------gaaaattatttgttggcactgtgtgaaagagat +agaaagaaggagcttcttcagttgctagacatcatagacataaccagagtttcctcgttg +gataatgtagctagcatatttagatctcttgggcggctatcattggaagcttttgcagag +ttgtttgtcttggtattgaaagattgtgatcacagggctgaaagtatttcagatttaatc +tactcttatgcatctagcttgagaaatacatcggttgaggaagttattttgaaattcaaa +gagatgcatggaaaaatggatcttgctcttttggctggatcatatgagaaactcattgat +ttttgtcttgattccactaaggtctatatggctttggatttagttgatgagatgtgtgaa +gcaggtttatccttatccacgggagcactcaatgccatatgtcatgcctgtgaggagagc +tgtgaatatatgctggctcgtcggatctataaaatgctctgtgaccacaaattgaagcca +aatactgagacgttcagaagtattataaacttgaacgttagaatgaaagattttgataat +gcatatgccgtgttaaaagatttgggaaagatgaatttggtgccttcagcaagtatgtac +aatgctatattggctggttgttatagagagaaaaacaagaatggtgtgctcagggttctc +aaagaaatgaaagatgcggatgtcaaaccagattctcagactttcagctatctgataagc +aactgtgcatgtgaagaagacattattaagtattatgaacaactggaggatgttggtgtt +aatccaacaaagcaagttttcatggcactcataaatgcatatgctgcaactggccaattt +gagaaggccaaggaggttgtcaaagagaaaggaatacttacgaagaacttgcatgaaatc +aaaagtactcttgtctcgtctctggcatcacatggaaaaatgtctgatgcactggccatt +tacaaggaaatgaaaaagaatggtttctctttggagccaaaggccgttatatctctcatc +gaaaaccagcattataaaggagacttgaaggtattgctcagcttgcttgaagatttgaat +---gatccacaatattggattgatggttgctgcagacttatcttgtactgtgttcggaac +aaggaattgaggactgctgttgatttgttgaaaaaactttctgataattgtcgggatgat +gatttggctagagaagttatttttgatgaggtattttcacacattgcggattcagagcat +cctgatttgcagatcggaatagacttgctccaagctattaaggaggatctgaagttgtac +ccttcacgaaaatgtctggattttctacttagtgcttgtgttaatgggaaggatctccag +aaagcccgattggtgtggaaggagtataagataaatggtcttccatacaacattttaagc +tacttgaggatgtaccaggcattcctgatttcaggagatgcagcagcagccaaacatttt +ctgagtaaaataccgaaagatgatccacatgttctgtctgtgcttcacgcgtgccgtgta +acctat------gcaaagcccaaggaggaa---------aaaaagaaggaaaagaaaaag +aaaaagaagaaaaaaaca +>s3 +------------------------------------------CCAAAAACGCCACTTGAT +CCTGCGGCAGAGATAAAGCAGCGCCTCAAAACCCTGACATTGCGATCGAAGAAAGCAGTC +CTAAAGCAG------AGCGTCCAG---ACCGCCCTTCCT--------------------- +---------GCAGTTTCCGTTGATATAACATCCAAGACAGAAGCGCCAAGTCTTCCTGTG +------------------------------------AAGAATGAAACTCTAAAGCAGTTT +GTCTGTTTGATA---------AACCCTGTTTCTTCG------------------------ +---------------------------------------------------TCG------ +------------------------------------------------------------ +---------TCCCAG------------CAC------TCGTTCCAGGATGAACTTATGCGT +AGCTTTACTGACGGT---------TCGTCAAAT------------------------GGT +TCAGCCAAGATAGTAACAAATGAGATATCTGCAATATTATGCGGTGGCAAGTATGCAGAG +AGTGTTTGTTCCATTGACTTA---GAGGTTGAAAGTGATAAACCTATTGAAAAGGAACTT +GAGCTACCATGGTTTGCGACTATGTGTCATAGTGGTGAATCATCATGCCGGAAAGAAGTT +TCTCGTGAGCGGAAGCAGAAATGGATCTTCAAGAATACCCAACAAAGTTGGTTTCAAAAG +CTGATAATAATGTGTGGTGAAAAACTGGGTTCAGATGCTATCATGAAGATGCTTGCTAGA +TTAGGCCGGGAGACTGGTCTAAAAGAATACAGTGCATATATAAGACTTTGTGTAGAAACT +GCTAGGAAAACTGAAGATGAAGAAGTCCAGTTGGAGCAGACTTATCTAGCTTATCAGCTT +TTCAGAAAAATGAAGGAAGCCGGACTTCCTATGGAGGAGGAAACTTATAGCCCATTTCTT +ATGTATCTGATTGATATGCGGATGGAAGAGGAGTTCTATTTTTTCCTTGCAGTCATCAAA +GATGAGGATTCTACTTGCAATGCAAGATTTTGCTATTATGAATTACTGCTCTTGATTGAC +GTGGGCAATGAAAACAAAATTCACGAGCTTATTCATCAGGTTACTGCAGGGGATACTGAA +GGGCGATCTGCAATACAA---------GAAAATTATCTGTTGGCATTATGCCAAAGGGAC +AGGAAGAATGAACTTTTGGAACTGTTGGAAACTATTGATGTTACTGGTCTTTCATCA--- +GCCACAGCAGTTAGTGTTTTCAAATCCCTGGGGAGGCTAGAACTGCAGCCTTTTGCAGAG +AAGTTTATTTTGACATTCAAGGCAAGCGGTCATGGGGCTGAAAGCATATCAGACTTCATC +TTTTCCTATGTTACTAGCATGAAAAAACTAGCGGTTGAGGATATGATATTGAAGTATGAA +GACATGCATACAAAAGCAGATATTTTGCCTTCATCTACACTCTATGAGAAGCTTATTAAT +TTCGCTTGTAGTTCTCTTGAGGTACATTCTGCTTTGGATCTGGCGGATCGGATGTGTGAA +GCAGGATTTACCATATCAGCCGAAACAGTTAATGGCATCTTACATGCATGCGAAGAAAGC +TATGACTATGATTTGGTTGGACGAATATATTCGGTTCTCTCACGCCACAACTTGAAGCCA +GATAGTGAGACCTTCGAGAGCATGGTTAATTTGTGTGTTAGAATAAGAGATTATGCCGGT +GCTCGCAAAATGCTGAACGAATCGGAGAAAAGGAATCTAGGTCCTACGGCCACTATGTAC +AATGCTATAATGGGCGGCTTTTACCGCGAGAAGAATGTCGTCGGAGCGTTGGCAGTTCGT +AGAGATATGGAAAAGAAAAACGTGAAACCTGATCCTCACACCTACTCTTACCTCATTGGC +AACTCTGAGTGCTTGGAAGATGTTATCAAGTACTACGAGGAAATGAAGTCCACAGGAGTC +CAAGTTACAAAAATTGTGTACATGGCACTTATAAATGCCTATGCTGCTTGTGGAGACTTT +GAGAAAGCCAAAAAGGTAGTCCTGGACAACGGAATACCCAAAAGGAACTTAAATGAAGTC +AGAAGTGCGCTTGTTTCTGCTCTTGCATCACATGGTCGAATGTCTGATGCTCTTGAGATT +TATGATAAAGTGAAGCAAATTGGTTTCAGTTTAGAGCCAAAAGCCATCATATCTCTCATC +GAATACATGCAACCAGAA---GAACTGGGCAGACTATTCAACTTGATTGACGAACTGAGG +---GATCGATACTATTGGGTAGATGCTTGCTTCAGAGGCATTGCTCTTTGTGTTAGAAAC +AAAAAACTAAGGTCTGCTATTGACTTGATTAAGAAGCTCTTGAATAAATTGCATGATGAG +AAATTTGCAGTTGAATTTCTTCTTGATGAGGTATTCTTCCAAATTGCAGAGCTGGAGCCT +CCAGATCTGCAGATTGGTTTAGACCTGCTTACGGCGATAAAGGAAGAGCTTAAGCTTCAG +CCTTCAAGGAAGTCTCTGGATTTTCTGCTTAGTGTTTGTGTCAACACAAAGGATGTGAGG +AGTTCACATCTGATATGGGAGGAGTACCAAAAGGCAGGGTTTCCTTACAATGTTCTAAGC +TTCCTAAGGATGTATCAGGCACTCCTGGCTGCAGGTGATTTAACATCTGCTGCAAAAGTG +CTAAATAGAATGCCGAAAGATGATGTCCATGTCCGAATGCTCATCAGCTCATATCAGTCT +ACTTACATGTCTGCT------------AGA---------AATGGCAAGAAAGAGAAGATA +AAGTTGAGTTTGAAATGA +>s4 +---------------------------------------------GAAATGCCCGCCTCA +GGAGCC---------------------AAAAACCTAAGC---------------TCATTG +TTCCGCTCC------GCCGTTAAA---ACCGCCACCGCC--------------------- +---------GCTAAACCAGCTAAGAAAACTTCC---------------------CCACCG +------------------------------------GAGGACACAGCCCTGAAGCAATAC +CTCTCTCTGCTCGGAACTTCATCCCCGATCACGTCT------------------------ +---------------------------------------------------ACTTTAAAA +TCGGCACCACATAAACCTCAGCTCTCTGAGAAGCCACCGAACTCATCACTTCCTCAGTCG +AAGCGAGAGACTAAA------------CAC------TCAGTCAGTGATTTGGTCCTCCTA +AGCCCGAAACAAGGAGCCACAAAGAGCCCTGAG------------------------GAT +TCAGCAAAGGAGATATCCAGAGAGATATCGGCAATATTGTGTGGTAGCAGAGACTTGGAT +TCGTCT---------GACTTACGAGAGGCTGACACAAGGAAACCTATAGAAAAGGTTCTT +GAGCTGCCATGGTTTTCAAATTTGTGTCACAACGGCACATCATTGCGTCGAAAAGAGATA +TCACGGCGACGGAAACAAAAATGGATATTCAAGAATACCCAAAAAAATTGGTTTGGCCGG +TTGGTGACAATGTGTGCAGAAAAACTTGGTGCAGATGCTACTATTCAGGTATTTGGTAAA +TTAGGCCGAGAGACTGGTTTGAAAGAGTACAATGCACTCATAAGACTCTGCATAGAAACA +GCTAAAAAAAGCAACAATGAAGAAGTTTCGCTGCAACAGATTTACAAGGCTTATCAGCTT +TTCAAATCAATGAAGGAGCAGGGTTTTCAGATAGAAGATGAAACTTCTGGTCCATTTCTC +ACGTATCTGATTGACATGCATATGATAGAAGAGTTTTATTTTTTTCTTGAAATCATCAAA +GATGAGAATCCTAGATCATATGCAAGATTAGGTTACTATGAGATGCTGCTTTGGATAGAA +GTGGATAATGAAGACAAAGTTCATGAGCTTTTAGACCAGATTACTGCTGGGGATGGTGAA +GGGGCATCTGATTTACGA---------GAAAATTATTTGTTGGCTCTATGTGAAAGAGAC +AGGAGGAAGGAACTTTTGGAACTTTTAGAGGTTGTAGATGTAACTAAACTTTCATCG--- +GATAATGTAGTTAGAATTTTCAAGTCTTTGGGAAGGCTATCATTGCAGTCTTCTGCGGAG +AAGTTTATTTTGACATTGAAAACAAATGGTCATGGGGCTGAGAACATATCAGACTTCATC +TACTTCTATGCTACCAGCATTTCAAATTTAGCGGTTGAAGATACTGTTTTAAAGTACAAA +GGCATGCATGCAAAACTGGAGGTGTTGCCTACGTCTATCTCATATGAGAAACTTATTAAG +TTCTGTTGTCATTCACTCAAGGTGCATCTAGCTTTGGATGTAGCTGACCAAATGTGTCAA +GCAGGATTGACCATATCAACAGAAACACTTAATTACATCTCACAAGCATGTGAAGAAAGT +TGTGAGTTTAATTTGGTTCGTCGGATCTATTCAGTTCTCCATTCCCATAATTTGAAGCCA +GACAGTGAGACCTTCCGGAGTATGATAAATTTGAATGTCAGAATGAAAGATTATGATGGT +GCATATATCTTGCTGAAGGATTTGATGGAAATGAATTTAATGCCTACAGCAAGTATGTAC +AATGCCATAATGGCTGGCTATTTTCGAGAGAAAAACATTGTTGGCGGGTTGAGGGTTCTC +AACGAAATGGAAAAAGCAGATGTCAAACCAGATTCCCAGACTTACTGCTATCTCATAGGC +AACTCTGAATGTGAGGAAGATATTATTAAGTATTATGAAGAAATGATGTCTACTGGAGTC +CAAGTCACAAAGCATGTTTTCATGGCACTTGTAAATGCATATGCCACATGTGGCGAGTTT +GACAAGGCGAAACAGGTAGTATTAGACAAAGAAGTACCTGTAAAGAACTTAAATGAAATC +AAAAGTGCGCTTGTCTCTGCTCTTGCATGTCATGGGCAAATGTCTGATGCCCTTGCCATT +TATGACGAAATCAAACAGGGTGGTTGCAGTTTAGATCCGAAGGCTATTATATCTCTCATT +GAACACATGCAATCAGAAGGAGAATTGTCTAGATTACTTGAGCTGCTTGAGGAATTAAGT +---TGTCCAGGCTATTGGATTGATGGTTGCTTCAGAGTCATCTTATATTGTGTTAGAAAC +AAGCATTTAAGGCCTGCCATCGATTTGCTCAGGAAAATCTGGAATAAATTGCACGATGAT +GAAGTGGCAGGCGAAGTTCTTTTTGATGAGGTATTTTCCCAAATTGCGGAGATGGAACCC +CCAGATTTGCAGATTGGATTGGAATTGCTTGAAGCCATAAAGGAAGAGCTTAAACTTCGT +CCTTCACGGAAATGTCTGGATTTTCTTCTTAATGCTTGTGTCAATGCAAAGGATTCAAAG +AGTTCTCTTTTGATTTGGAAGGAATATGAAAAAGCTGGCCTGCCGCACAATGTTTTAAGC +TTCTTAAGGATGTATCAGGCCCTTTTGGCTTCTGGGGATTCAAAATCGGCTTCAAATTTA +CTGAACCGAATACCGAAAGAGGATTCTCATGTTCGTTCCGTCATCAGCGCATGCCAATCG +ACCTAC------GGT------------AAG---------AACCGTAAGAACGAGAAGAAA +AAGAAGAAT---AGTTGA +>s5 +------TCGTTAGTTCTTCTAGTTCTAGGGTTTCAAAATTATCGAAATTTCTTTTGGCAT +------------------------------TTTCTCTCT---------------TCATTT +TTTTTTTCCTTTTTGGTTCCCAAACCTCCTCTGACTCTC--------------------- +---------CCTCTTCCCCAATTTCTCATTTCTCGTTTTCCCTCCCTTCCTCCTCCTCCT +CCTCCTAGT---------------ACTACGATTGCTGATGACGCTGCCCTAAAGCAACAT +GTCTCCTTGCTG---------GTTGCTTCCTCTTCAACTCCCACTCCCGAAGCGACGGTG +ATGACGAAGACTGCGGAGTCTGGTGTCGGTGAGGCGAATAAACTGAAGGGTTCT------ +------------------------------------------------------------ +---------AAAAGGGAGCGAGTTGTTAACGAGGACTCCATTAGCTGTTTGCTCCTCCGA +AGCTTGAACCCAAGCACCGAGACGAATTCA------------------------------ +------------------------------------------------------------ +---------------------------------AAAGAGAGATCCGTGGAGAAGCAGCTT +GATCTACCATGGTTATCTAATTTGTTAAATATTGATGCCTTTCACCGTCGCAAAGAACTA +TCTCGTGAGCGAAAGCAGAAGTGGATATATAAGAATACACAAAATGTTCGGTTTTCATGG +TTAGTCAGAAAATGTGCCAAGAAGCTTGGAGTAGATGCTGCTATCCAGGTTTTTGGTAAA +TTACGCCCGGGAACTGGCAGAAAGGAGTATAACACACTTATAAGGCTATATATAGATACT +GCTAGGAAAGCTGAAGATGAAGAGGTTGCTTTGGATCAGAGTTACAGGGCTTATCAGCTC +TTCAAATTGATGAAGGAGGAAGGTTTCAATATAGAAGAGGAAACTTATGGTCCATTCCTC +ATTTATCTCATTGACATGCATATGACAGATGAATTCTATTTTTTTCTTCCTCTTATCAAA +GATGAGAATGCAAGTTCAATGGCAATGTTGGGGTACTATGAAATGTTGCTTTTGATAGAA +GTGGGTGATGAAGACAAAATTCATGAGCTCATCTCCAAACTCACCCATGAGAAATGTGAA +CATGACCCCAATCTACAAGCTCTTGCAGAAAATTATTTGTTAGCACTGGGTGAACGAGAC +AGGAAGAAGGAATTCTTACAACTCTTGCAGGTTATAGACATTACTAACCTTCCATTA--- +GACAATATTGGTAGGATTTTTAAATCCTTGGGCAGGCTGTCATTGCAATCTTTTGCTGAG +GATCTTATTTTGGCATTCAAAACAAATGATCAAGAGTTTGAAATCCTGTCAGACTTCATC +TATTTGTACTCTACCAGTGTGACAAATTTATCGGTTGAGGATGCCATTTTGAAGTACAAG +GACATGCATGCGAAGCTGGAGGTTCTGCCTTCATCCAAATCATATGAAGAGCTTATCAAG +TTCTGCTGTGGTTCACTGAAGGTGCATCTAGCTTTGGATGTGGCTGATCAGTTGTGTCAA +GCTGGATTGTCCTTATCAACAGAAACACTTAATACAATATCACGTGCATGTGAAGAAAGC +AGTGAGTTTTATCTGGTTCGCCAGATCTATTCAATTATCTGTTGTCATAACTTGAGCCCA +AATTCTGAAACATTCAGGAGCATGATAAATTCAAGTGTTAGAATGAAAGATTTTGATGGA +GCCTATGACATGCTGAAGGTGTCGGAAAAAAAGAACTTAATGCCTAGTGCAAGTATGTAC +AATGCTATAATGGGTGGCTACTTCAGAGAGGGAAACACTGTTTCCGGATTCGAGGTTCTC +AAACAAATGGAGAAGGCAAATGTGAAGCCAGATTGCATTACTTACAGCTATCTCATTGGA +AACTCGAAATGTGTGGATGATATCATTAAGTATTTTGAAGAAATGAAGACATCAAGTGTG +ACCCTGACGAAGCATGTTTTTATGGCAATGATAAATGCATATGTCACTTGTGGAGAGCTT +GAGAAGGCAAAACAGGTAGTCTTTGACAAAGCAGTTCCTGAAAAGAATGCAAATGAAATC +AGAAGTGCCCTTTTATCTGCTCTTGCATCAAATGGGAAAATTTCTGATGCTCTTGACATA +TATGAAGAAATCAAGCAGAGTGGTTCATCTGTGGAGCCAAAAGCCTTGATCTCTCTCTTG +GAACACATTCAAGTAGAGGGAGAACTGCCTAGATTACTTCAGTTCCTTGAGGAATTGAGT +---GACCCAGATTATTGGGCTGATGGTTGCTTCAGAGTCATATCATATTGCATCAGACAC +AAAGATATACAGTCTGCTGTTGATTTGCTGAAGAAACTCAAGGATGCATTTGATGATGAT +GAATTGGCAGGGGAAGTTCTTTTTGATGGGGTCTTTTGTCAAATTGCGGAGATGGAGCCT +TCAGGTTTACAAATTGGGCTTGAATTACTTCAATCAATAAAGGAAGACTTGAAGCTTCTT +CCTTCTAGGAAATGCCTGGACTTTTTACTGAGTGCTTGTGTCAAGGCAAAGGATGTAAGG +AGTTCTCTTATGATCTGGAAGGAATATCAAATGGCAGGCTTACCTTATAATCTTCTAACC +TTCTTGAGGATGTATCAGGCCCTTTTGACATCTGGGGATTTCAAATCTGCAGCAAAGATG +CAGGATAAATTACGGAAAAATGAGCACCATATTCATTCTATCGTTGTTGCTTGCGAAGAT +GCTTTC------AGCAAGCCTACTGAAAAA---------AATAAGGACACGGCTAGGAAA +AAGAAGAAA---TTTTAG +>s6 +CGATCTCCCCCTCCTCTGCCCCCATTCACCTACTCATCCCGAAATGAAATGCCAGCCTCT +------------------------------CACCTAAGC---------------TCACTC +TTCCGTTCC------ACCGTCAAATCCTCCGCCTCCGCC--------------------- +---------GCCGCCGCCGCCAGACTCTCTCAAAAACTCCCCTCTCCTCCGCCTCCTCCT +CCTCCTCCTATACCTGTTACTGTTGCGGCGATTAAAGAGGACGGAGCCCTAGAACAGTGC +AGCACCTTGCTC---------GAGGCTTCTTCGAAA------------------------ +---------------------------------------------------TCG------ +------------------------------------------------------------ +---------AAGCGA------------CGTGAGGATTTTGTTACTGATTTGGTGCTCCGT +AGCTTGAGCCCAGGGTTCGAGTCTATCTCTGAA------------------------GAT +TCAGCAAACCAAATACCAAATGAGCTATCGTCAATACTTTGTGGAACTAAAGATTTAGAG +TCCTCCCATTCTTCTGACATCCTAAAGGTTGACAATGAGAAATCTATGGAACAGCTACTT +AATCTACCATGGTTTTCTAGTTTGTTCCACACTGGCACCTCACTACGTCGCAAAAAACTC +TTTCGGGAACGGAAGCAGAAGTGGATCTTTAAGAATACACAAAAAGCTCGGTTTTCCTGC +TTGGTCACTAGGTGTGCACAGAAGCTGGGACCAGATGCTACCATCCAGGTATTTGGCAAA +TTAGGCAGAGAAACTGGAGTGAAAGAGTACAATGCTCTTATAAAGCTATGCATAGAAACT +GGTAGGAAAACCGACGATGAAGAGGTTGCAGTGGAGCAGTGTTACAAGGCTTATCAGCTC +TTCACTTGGATGAAAGAAGAAGGTTTTCAGATAGAGGAGCAAACCTATGGACCATTTCTC +ATGTATCTTATTGACATGCATTTGAAGGAAGAGTTCTACTTTTTTCTTCCGTTAATCAAA +GAT------ACAAGTTCATCGGCGAGGTTTGGCTACTATGAGATGCTGCTTTTTGTTGAA +ATTGACGATGAAGAAAAAATTCATGAGCTTATTAGTCAAATTACCCAGGAAAAATATGAA +AAGGACCTCAATCTACAAGGTCTTGCAAAAAATTATTTGTTGGCACTATGTGAAAGGGAT +AGGAAGAATGAGCTCTTGGACCTCTTGGAAGTTGTAGACATTACGAAACTTCCACCG--- +GAAAGTATTGGTAGCATTTTGAAATCCCTGGGGAGGCTCTCATTGCAGTCCTTTGCAGAG +AAGTTCATTCTGGCATCCAAAGAAGATGGTAAAGGGTCCGAATGTATATCAGACTTCATC +TGTTTGTTCACTACCAGCATGACAAACTTTGTGGTTGAAGATATCATTCTAAAGTACAAG +GACATGCACACGAAGCTGGAGGTTTTGCCTTCTTCTGAATCATATGAGAAGCTTATCAAA +TTCTGCTGTGGTTCACACAAGGTGCACCTTGCTTTGGATGTGGTTGATGAGATGTGTGAA +GCCGGGTTTTCTTTGTCAACAGATACGCTTAACTCTGTACTGCATGCGTGTGAAGAAAGC +AGTGAGTTTTGTCTGGTTCGCCGGATATATTCAGCTCTCTGTTATCACAAGTTGATGCCG +AATAGTGAAACATTCAGAAGCATGATAAACTTATTCGTTAGAATGAAAGATTTTAATAGA +GCATATGACATGCTGACGGAGTTGGAGAAAGTGAACTTAATGCCTACGACTAGTATGTAC +AACACTATAATGGGTGGCTACTTCAGAGAGGGAAACACTGTCAACGGTTTTAAGGTTTTG +AAAGAAATGGAGAAGGCCGATGTCAAGCCAGATTGCCAGACTTATGGCTATCTTATTAAC +AACTCAGAACGCGAGGAAGATATCATCAAGTATTATGATGAAATGAAGTCGTCAGGAGTG +ACCTTGACAAAGCATGTTTTCATGGCACTGATAAATGCATATGCCAATCGTGGAGAATTT +GAGAAGGCAAAGCAGGTAGTTTTTGACAAAGGAGTACCTCTGAAGAACATAAATGAAATT +AGAAGTGCCCTTGTGTCTGCTCTTGCATCACATGGTAAAATATCTGATGCCTTTGACGTA +TATGAACAAATCAGGCAAAGTGGTTCAACTGTAGAGCCAAAGGCCTTGGTCTCTCTCGTG +GAATTCACTGAATCAGAAGGACAACTGCCTAGATTACTTCAGATTATGGAGGAACTGACT +ACTGATCTAGTTTATTGGATTGATGGTTGTTGCAGAGTCATTTTGTATTGCATAAGACAC +AAAGATATAAGGTCTGCGGTTGATTTGTTAAAGAAGCTCAAGGACGCGTTTAATGATGAT +GAACTGGCTGGTGAAGTTCTTTTTGATGAGGTCTTTTCTCAAGTTGCAGAGATGGAGCCA +TCAGGTTTACGATTGGGCCTTGACTTGCTTCAAACAATCAAGAAAGAACTTAAAATTCGT +CCTTCTAGGAAATGCCTAGATTTTTTACTTAGTGCTTGTGCTGACGCAAAGGATGCAAAG +AGTGCCCTCTTGATATGGAAGGAATACGAAATGGCTGGCCTACCTTACAATCTTGTTACC +TCCTTAAAGATGTATCAGGCCCTTATGGCATCTAGAGACTTTGAGTCGGCTGCTAAGGTG +CTGACTAGAATACCAGTAGATGACTCCCATGTCCGATCTATCCTCTTTGCTTGTGAAGCT +ACTTAT------GGTATTCCTACTAAAAAAGGTACCAGCAACAAGATGATTAGGACACTG +AAGATGAAA---GTTTAG diff --git a/example_files/manuscript_example/test2.fa b/example_files/manuscript_example/test2.fa new file mode 100644 index 0000000..09b8f22 --- /dev/null +++ b/example_files/manuscript_example/test2.fa @@ -0,0 +1,306 @@ +>s1 +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +---------------------------------------------atgacaaactgggat +ctcgatgatccatctgcctctgaagtggctagtcatggcaaagcattggaggatgattct +aacttgccttggtttactactttgttcaatagcagcacaccactgcgtcgtaaagagtta +tctcaggatcgaaagaataaatggatcttcaagaacacccaaaagctacgttttgataag +ttggttaatttgtgctcggataaagtcggatcaggttcaacttttgacgtgttatataaa +ttaggtcgagggacaggtttgaaagagtataatgctttcataaaaacttgcttagagaca +gcaagaaattgtaatgatgagaaggtccagatggagcatattttgcaggcataccgactg +cttcgattaatgaaggaacgaggttttccaatagaagaggaggcatttggcccattttta +atgttactaattgacatgcatatggatgatcaatttttaatccttcttgagattatcaaa +gatgaagatcctagtttacatccacgattaggctactatgagatgcatttttggattgag +atgaataatgaagaaaaggttcatgagttttgccaacgtatttcttctggtgagagtgaa +atgggatccttattgcac---------gaaaattatttgttggcactgtgtgaaagagat +aggaagaaggagcttcttcagttgctagacatcatagacataaccagagtgtcgtcattg +gataatgtagctagcattttcagatccctggggcggctatcattggaagcttttgcagag +ttgtttgttttggtattgaaagattgcggtcataaggcccaaagtatttcagatttgatc +tactcctatgcgtctagctcaaaaaataca------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +---------------acg +>s2 +------------------------------------------------atgccccgcacc +aacgtc---------------------aaaattctcagc---------------accctc +tttcgcacc------gccgttaaagtaacctcctctgctccttccatcgttaaagacgcc +gttacttccactaaaaaaaagaaattacgctctcaccctccccctcctccacctccacct +ccacctcct---------------cctcct------------------------------ +---------------------cctcctccttcttca------------------------ +---------------------------------------------------ggg------ +------------------------------------------------------------ +---------gtaaaa---------------------------tcgtctttgcgcaagaaa +cctcctcaacaaaattatcaaacttcctccaacacctctaatccccttccagaaggagat +tcagttgagcaagcaacacatggcatatcttcaatattgtgtggtaccacagactgggaa +atcgatgatccatctgacacggaagtggctaatgatgacaaggcattagaagatgattct +gacttgccttggttttccaatctttttaatagcagtatgtcactgcgtcgtaaagagtta +tctcgggatcgaaaaaataaatggattttcaagaacacccaaaagctacgttttgataag +ttggttaatatgtgcttagataaagtgggatcaggttcaacttttcatgtgttatataaa +ttaggtcgagggacaggtttgaaagagtataatgctttcataaaaggttgcatagagaca +gctagaaatagcaaagatgaattgtttcaggtacaacagatcttggaggcatatcggctg +cttcaattgatgaaggaacggggttttccaatagaagaggatgcatttggcccatttttc +ttgtatctaattgacatgcatatggatgaacagttttcacttcttcttgagattgttaaa +gaggaggatcctaatttacatccacgattaggctactatgagatgcttttttggattgag +atgaataacgaagaaaaggttcaggagctttgccagcagattgccactggtgagagcgaa +ttgggaacattattgcat---------gaaaattatttgttggcactgtgtgaaagagat +agaaagaaggagcttcttcagttgctagacatcatagacataaccagagtttcctcgttg +gataatgtagctagcatatttagatctcttgggcggctatcattggaagcttttgcagag +ttgtttgtcttggtattgaaagattgtgatcacagggctgaaagtatttcagatttaatc +tactcttatgcatctagcttgagaaatacatcggttgaggaagttattttgaaattcaaa +gagatgcatggaaaaatggatcttgctcttttggctggatcatatgagaaactcattgat +ttttgtcttgattccactaaggtctatatggctttggatttagttgatgagatgtgtgaa +gcaggtttatccttatccacgggagcactcaatgccatatgtcatgcctgtgaggagagc +tgtgaatatatgctggctcgtcggatctataaaatgctctgtgaccacaaattgaagcca +aatactgagacgttcagaagtattataaacttgaacgttagaatgaaagattttgataat +gcatatgccgtgttaaaagatttgggaaagatgaatttggtgccttcagcaagtatgtac +aatgctatattggctggttgttatagagagaaaaacaagaatggtgtgctcagggttctc +aaagaaatgaaagatgcggatgtcaaaccagattctcagactttcagctatctgataagc +aactgtgcatgtgaagaagacattattaagtattatgaacaactggaggatgttggtgtt +aatccaacaaagcaagttttcatggcactcataaatgcatatgctgcaactggccaattt +gagaaggccaaggaggttgtcaaagagaaaggaatacttacgaagaacttgcatgaaatc +aaaagtactcttgtctcgtctctggcatcacatggaaaaatgtctgatgcactggccatt +tacaaggaaatgaaaaagaatggtttctctttggagccaaaggccgttatatctctcatc +gaaaaccagcattataaaggagacttgaaggtattgctcagcttgcttgaagatttgaat +---gatccacaatattggattgatggttgctgcagacttatcttgtactgtgttcggaac +aaggaattgaggactgctgttgatttgttgaaaaaactttctgataattgtcgggatgat +gatttggctagagaagttatttttgatgaggtattttcacacattgcggattcagagcat +cctgatttgcagatcggaatagacttgctccaagctattaaggaggatctgaagttgtac +ccttcacgaaaatgtctggattttctacttagtgcttgtgttaatgggaaggatctccag +aaagcccgattggtgtggaaggagtataagataaatggtcttccatacaacattttaagc +tacttgaggatgtaccaggcattcctgatttcaggagatgcagcagcagccaaacatttt +ctgagtaaaataccgaaagatgatccacatgttctgtctgtgcttcacgcgtgccgtgta +acctat------gcaaagcccaaggaggaa---------aaaaagaaggaaaagaaaaag +aaaaagaagaaaaaaaca +>s3 +------------------------------------------CCAAAAACGCCACTTGAT +CCTGCGGCAGAGATAAAGCAGCGCCTCAAAACCCTGACATTGCGATCGAAGAAAGCAGTC +CTAAAGCAG------AGCGTCCAG---ACCGCCCTTCCT--------------------- +---------GCAGTTTCCGTTGATATAACATCCAAGACAGAAGCGCCAAGTCTTCCTGTG +------------------------------------AAGAATGAAACTCTAAAGCAGTTT +GTCTGTTTGATA---------AACCCTGTTTCTTCG------------------------ +---------------------------------------------------TCG------ +------------------------------------------------------------ +---------TCCCAG------------CAC------TCGTTCCAGGATGAACTTATGCGT +AGCTTTACTGACGGT---------TCGTCAAAT------------------------GGT +TCAGCCAAGATAGTAACAAATGAGATATCTGCAATATTATGCGGTGGCAAGTATGCAGAG +AGTGTTTGTTCCATTGACTTA---GAGGTTGAAAGTGATAAACCTATTGAAAAGGAACTT +GAGCTACCATGGTTTGCGACTATGTGTCATAGTGGTGAATCATCATGCCGGAAAGAAGTT +TCTCGTGAGCGGAAGCAGAAATGGATCTTCAAGAATACCCAACAAAGTTGGTTTCAAAAG +CTGATAATAATGTGTGGTGAAAAACTGGGTTCAGATGCTATCATGAAGATGCTTGCTAGA +TTAGGCCGGGAGACTGGTCTAAAAGAATACAGTGCATATATAAGACTTTGTGTAGAAACT +GCTAGGAAAACTGAAGATGAAGAAGTCCAGTTGGAGCAGACTTATCTAGCTTATCAGCTT +TTCAGAAAAATGAAGGAAGCCGGACTTCCTATGGAGGAGGAAACTTATAGCCCATTTCTT +ATGTATCTGATTGATATGCGGATGGAAGAGGAGTTCTATTTTTTCCTTGCAGTCATCAAA +GATGAGGATTCTACTTGCAATGCAAGATTTTGCTATTATGAATTACTGCTCTTGATTGAC +GTGGGCAATGAAAACAAAATTCACGAGCTTATTCATCAGGTTACTGCAGGGGATACTGAA +GGGCGATCTGCAATACAA---------GAAAATTATCTGTTGGCATTATGCCAAAGGGAC +AGGAAGAATGAACTTTTGGAACTGTTGGAAACTATTGATGTTACTGGTCTTTCATCA--- +GCCACAGCAGTTAGTGTTTTCAAATCCCTGGGGAGGCTAGAACTGCAGCCTTTTGCAGAG +AAGTTTATTTTGACATTCAAGGCAAGCGGTCATGGGGCTGAAAGCATATCAGACTTCATC +TTTTCCTATGTTACTAGCATGAAAAAACTAGCGGTTGAGGATATGATATTGAAGTATGAA +GACATGCATACAAAAGCAGATATTTTGCCTTCATCTACACTCTATGAGAAGCTTATTAAT +TTCGCTTGTAGTTCTCTTGAGGTACATTCTGCTTTGGATCTGGCGGATCGGATGTGTGAA +GCAGGATTTACCATATCAGCCGAAACAGTTAATGGCATCTTACATGCATGCGAAGAAAGC +TATGACTATGATTTGGTTGGACGAATATATTCGGTTCTCTCACGCCACAACTTGAAGCCA +GATAGTGAGACCTTCGAGAGCATGGTTAATTTGTGTGTTAGAATAAGAGATTATGCCGGT +GCTCGCAAAATGCTGAACGAATCGGAGAAAAGGAATCTAGGTCCTACGGCCACTATGTAC +AATGCTATAATGGGCGGCTTTTACCGCGAGAAGAATGTCGTCGGAGCGTTGGCAGTTCGT +AGAGATATGGAAAAGAAAAACGTGAAACCTGATCCTCACACCTACTCTTACCTCATTGGC +AACTCTGAGTGCTTGGAAGATGTTATCAAGTACTACGAGGAAATGAAGTCCACAGGAGTC +CAAGTTACAAAAATTGTGTACATGGCACTTATAAATGCCTATGCTGCTTGTGGAGACTTT +GAGAAAGCCAAAAAGGTAGTCCTGGACAACGGAATACCCAAAAGGAACTTAAATGAAGTC +AGAAGTGCGCTTGTTTCTGCTCTTGCATCACATGGTCGAATGTCTGATGCTCTTGAGATT +TATGATAAAGTGAAGCAAATTGGTTTCAGTTTAGAGCCAAAAGCCATCATATCTCTCATC +GAATACATGCAACCAGAA---GAACTGGGCAGACTATTCAACTTGATTGACGAACTGAGG +---GATCGATACTATTGGGTAGATGCTTGCTTCAGAGGCATTGCTCTTTGTGTTAGAAAC +AAAAAACTAAGGTCTGCTATTGACTTGATTAAGAAGCTCTTGAATAAATTGCATGATGAG +AAATTTGCAGTTGAATTTCTTCTTGATGAGGTATTCTTCCAAATTGCAGAGCTGGAGCCT +CCAGATCTGCAGATTGGTTTAGACCTGCTTACGGCGATAAAGGAAGAGCTTAAGCTTCAG +CCTTCAAGGAAGTCTCTGGATTTTCTGCTTAGTGTTTGTGTCAACACAAAGGATGTGAGG +AGTTCACATCTGATATGGGAGGAGTACCAAAAGGCAGGGTTTCCTTACAATGTTCTAAGC +TTCCTAAGGATGTATCAGGCACTCCTGGCTGCAGGTGATTTAACATCTGCTGCAAAAGTG +CTAAATAGAATGCCGAAAGATGATGTCCATGTCCGAATGCTCATCAGCTCATATCAGTCT +ACTTACATGTCTGCT------------AGA---------AATGGCAAGAAAGAGAAGATA +AAGTTGAGTTTGAAATGA +>s4 +---------------------------------------------GAAATGCCCGCCTCA +GGAGCC---------------------AAAAACCTAAGC---------------TCATTG +TTCCGCTCC------GCCGTTAAA---ACCGCCACCGCC--------------------- +---------GCTAAACCAGCTAAGAAAACTTCC---------------------CCACCG +------------------------------------GAGGACACAGCCCTGAAGCAATAC +CTCTCTCTGCTCGGAACTTCATCCCCGATCACGTCT------------------------ +---------------------------------------------------ACTTTAAAA +TCGGCACCACATAAACCTCAGCTCTCTGAGAAGCCACCGAACTCATCACTTCCTCAGTCG +AAGCGAGAGACTAAA------------CAC------TCAGTCAGTGATTTGGTCCTCCTA +AGCCCGAAACAAGGAGCCACAAAGAGCCCTGAG------------------------GAT +TCAGCAAAGGAGATATCCAGAGAGATATCGGCAATATTGTGTGGTAGCAGAGACTTGGAT +TCGTCT---------GACTTACGAGAGGCTGACACAAGGAAACCTATAGAAAAGGTTCTT +GAGCTGCCATGGTTTTCAAATTTGTGTCACAACGGCACATCATTGCGTCGAAAAGAGATA +TCACGGCGACGGAAACAAAAATGGATATTCAAGAATACCCAAAAAAATTGGTTTGGCCGG +TTGGTGACAATGTGTGCAGAAAAACTTGGTGCAGATGCTACTATTCAGGTATTTGGTAAA +TTAGGCCGAGAGACTGGTTTGAAAGAGTACAATGCACTCATAAGACTCTGCATAGAAACA +GCTAAAAAAAGCAACAATGAAGAAGTTTCGCTGCAACAGATTTACAAGGCTTATCAGCTT +TTCAAATCAATGAAGGAGCAGGGTTTTCAGATAGAAGATGAAACTTCTGGTCCATTTCTC +ACGTATCTGATTGACATGCATATGATAGAAGAGTTTTATTTTTTTCTTGAAATCATCAAA +GATGAGAATCCTAGATCATATGCAAGATTAGGTTACTATGAGATGCTGCTTTGGATAGAA +GTGGATAATGAAGACAAAGTTCATGAGCTTTTAGACCAGATTACTGCTGGGGATGGTGAA +GGGGCATCTGATTTACGA---------GAAAATTATTTGTTGGCTCTATGTGAAAGAGAC +AGGAGGAAGGAACTTTTGGAACTTTTAGAGGTTGTAGATGTAACTAAACTTTCATCG--- +GATAATGTAGTTAGAATTTTCAAGTCTTTGGGAAGGCTATCATTGCAGTCTTCTGCGGAG +AAGTTTATTTTGACATTGAAAACAAATGGTCATGGGGCTGAGAACATATCAGACTTCATC +TACTTCTATGCTACCAGCATTTCAAATTTAGCGGTTGAAGATACTGTTTTAAAGTACAAA +GGCATGCATGCAAAACTGGAGGTGTTGCCTACGTCTATCTCATATGAGAAACTTATTAAG +TTCTGTTGTCATTCACTCAAGGTGCATCTAGCTTTGGATGTAGCTGACCAAATGTGTCAA +GCAGGATTGACCATATCAACAGAAACACTTAATTACATCTCACAAGCATGTGAAGAAAGT +TGTGAGTTTAATTTGGTTCGTCGGATCTATTCAGTTCTCCATTCCCATAATTTGAAGCCA +GACAGTGAGACCTTCCGGAGTATGATAAATTTGAATGTCAGAATGAAAGATTATGATGGT +GCATATATCTTGCTGAAGGATTTGATGGAAATGAATTTAATGCCTACAGCAAGTATGTAC +AATGCCATAATGGCTGGCTATTTTCGAGAGAAAAACATTGTTGGCGGGTTGAGGGTTCTC +AACGAAATGGAAAAAGCAGATGTCAAACCAGATTCCCAGACTTACTGCTATCTCATAGGC +AACTCTGAATGTGAGGAAGATATTATTAAGTATTATGAAGAAATGATGTCTACTGGAGTC +CAAGTCACAAAGCATGTTTTCATGGCACTTGTAAATGCATATGCCACATGTGGCGAGTTT +GACAAGGCGAAACAGGTAGTATTAGACAAAGAAGTACCTGTAAAGAACTTAAATGAAATC +AAAAGTGCGCTTGTCTCTGCTCTTGCATGTCATGGGCAAATGTCTGATGCCCTTGCCATT +TATGACGAAATCAAACAGGGTGGTTGCAGTTTAGATCCGAAGGCTATTATATCTCTCATT +GAACACATGCAATCAGAAGGAGAATTGTCTAGATTACTTGAGCTGCTTGAGGAATTAAGT +---TGTCCAGGCTATTGGATTGATGGTTGCTTCAGAGTCATCTTATATTGTGTTAGAAAC +AAGCATTTAAGGCCTGCCATCGATTTGCTCAGGAAAATCTGGAATAAATTGCACGATGAT +GAAGTGGCAGGCGAAGTTCTTTTTGATGAGGTATTTTCCCAAATTGCGGAGATGGAACCC +CCAGATTTGCAGATTGGATTGGAATTGCTTGAAGCCATAAAGGAAGAGCTTAAACTTCGT +CCTTCACGGAAATGTCTGGATTTTCTTCTTAATGCTTGTGTCAATGCAAAGGATTCAAAG +AGTTCTCTTTTGATTTGGAAGGAATATGAAAAAGCTGGCCTGCCGCACAATGTTTTAAGC +TTCTTAAGGATGTATCAGGCCCTTTTGGCTTCTGGGGATTCAAAATCGGCTTCAAATTTA +CTGAACCGAATACCGAAAGAGGATTCTCATGTTCGTTCCGTCATCAGCGCATGCCAATCG +ACCTAC------GGT------------AAG---------AACCGTAAGAACGAGAAGAAA +AAGAAGAAT---AGTTGA +>s5 +------TCGTTAGTTCTTCTAGTTCTAGGGTTTCAAAATTATCGAAATTTCTTTTGGCAT +------------------------------TTTCTCTCT---------------TCATTT +TTTTTTTCCTTTTTGGTTCCCAAACCTCCTCTGACTCTC--------------------- +---------CCTCTTCCCCAATTTCTCATTTCTCGTTTTCCCTCCCTTCCTCCTCCTCCT +CCTCCTAGT---------------ACTACGATTGCTGATGACGCTGCCCTAAAGCAACAT +GTCTCCTTGCTG---------GTTGCTTCCTCTTCAACTCCCACTCCCGAAGCGACGGTG +ATGACGAAGACTGCGGAGTCTGGTGTCGGTGAGGCGAATAAACTGAAGGGTTCT------ +------------------------------------------------------------ +---------AAAAGGGAGCGAGTTGTTAACGAGGACTCCATTAGCTGTTTGCTCCTCCGA +AGCTTGAACCCAAGCACCGAGACGAATTCA------------------------------ +------------------------------------------------------------ +---------------------------------AAAGAGAGATCCGTGGAGAAGCAGCTT +GATCTACCATGGTTATCTAATTTGTTAAATATTGATGCCTTTCACCGTCGCAAAGAACTA +TCTCGTGAGCGAAAGCAGAAGTGGATATATAAGAATACACAAAATGTTCGGTTTTCATGG +TTAGTCAGAAAATGTGCCAAGAAGCTTGGAGTAGATGCTGCTATCCAGGTTTTTGGTAAA +TTACGCCCGGGAACTGGCAGAAAGGAGTATAACACACTTATAAGGCTATATATAGATACT +GCTAGGAAAGCTGAAGATGAAGAGGTTGCTTTGGATCAGAGTTACAGGGCTTATCAGCTC +TTCAAATTGATGAAGGAGGAAGGTTTCAATATAGAAGAGGAAACTTATGGTCCATTCCTC +ATTTATCTCATTGACATGCATATGACAGATGAATTCTATTTTTTTCTTCCTCTTATCAAA +GATGAGAATGCAAGTTCAATGGCAATGTTGGGGTACTATGAAATGTTGCTTTTGATAGAA +GTGGGTGATGAAGACAAAATTCATGAGCTCATCTCCAAACTCACCCATGAGAAATGTGAA +CATGACCCCAATCTACAAGCTCTTGCAGAAAATTATTTGTTAGCACTGGGTGAACGAGAC +AGGAAGAAGGAATTCTTACAACTCTTGCAGGTTATAGACATTACTAACCTTCCATTA--- +GACAATATTGGTAGGATTTTTAAATCCTTGGGCAGGCTGTCATTGCAATCTTTTGCTGAG +GATCTTATTTTGGCATTCAAAACAAATGATCAAGAGTTTGAAATCCTGTCAGACTTCATC +TATTTGTACTCTACCAGTGTGACAAATTTATCGGTTGAGGATGCCATTTTGAAGTACAAG +GACATGCATGCGAAGCTGGAGGTTCTGCCTTCATCCAAATCATATGAAGAGCTTATCAAG +TTCTGCTGTGGTTCACTGAAGGTGCATCTAGCTTTGGATGTGGCTGATCAGTTGTGTCAA +GCTGGATTGTCCTTATCAACAGAAACACTTAATACAATATCACGTGCATGTGAAGAAAGC +AGTGAGTTTTATCTGGTTCGCCAGATCTATTCAATTATCTGTTGTCATAACTTGAGCCCA +AATTCTGAAACATTCAGGAGCATGATAAATTCAAGTGTTAGAATGAAAGATTTTGATGGA +GCCTATGACATGCTGAAGGTGTCGGAAAAAAAGAACTTAATGCCTAGTGCAAGTATGTAC +AATGCTATAATGGGTGGCTACTTCAGAGAGGGAAACACTGTTTCCGGATTCGAGGTTCTC +AAACAAATGGAGAAGGCAAATGTGAAGCCAGATTGCATTACTTACAGCTATCTCATTGGA +AACTCGAAATGTGTGGATGATATCATTAAGTATTTTGAAGAAATGAAGACATCAAGTGTG +ACCCTGACGAAGCATGTTTTTATGGCAATGATAAATGCATATGTCACTTGTGGAGAGCTT +GAGAAGGCAAAACAGGTAGTCTTTGACAAAGCAGTTCCTGAAAAGAATGCAAATGAAATC +AGAAGTGCCCTTTTATCTGCTCTTGCATCAAATGGGAAAATTTCTGATGCTCTTGACATA +TATGAAGAAATCAAGCAGAGTGGTTCATCTGTGGAGCCAAAAGCCTTGATCTCTCTCTTG +GAACACATTCAAGTAGAGGGAGAACTGCCTAGATTACTTCAGTTCCTTGAGGAATTGAGT +---GACCCAGATTATTGGGCTGATGGTTGCTTCAGAGTCATATCATATTGCATCAGACAC +AAAGATATACAGTCTGCTGTTGATTTGCTGAAGAAACTCAAGGATGCATTTGATGATGAT +GAATTGGCAGGGGAAGTTCTTTTTGATGGGGTCTTTTGTCAAATTGCGGAGATGGAGCCT +TCAGGTTTACAAATTGGGCTTGAATTACTTCAATCAATAAAGGAAGACTTGAAGCTTCTT +CCTTCTAGGAAATGCCTGGACTTTTTACTGAGTGCTTGTGTCAAGGCAAAGGATGTAAGG +AGTTCTCTTATGATCTGGAAGGAATATCAAATGGCAGGCTTACCTTATAATCTTCTAACC +TTCTTGAGGATGTATCAGGCCCTTTTGACATCTGGGGATTTCAAATCTGCAGCAAAGATG +CAGGATAAATTACGGAAAAATGAGCACCATATTCATTCTATCGTTGTTGCTTGCGAAGAT +GCTTTC------AGCAAGCCTACTGAAAAA---------AATAAGGACACGGCTAGGAAA +AAGAAGAAA---TTTTAG +>s6 +CGATCTCCCCCTCCTCTGCCCCCATTCACCTACTCATCCCGAAATGAAATGCCAGCCTCT +------------------------------CACCTAAGC---------------TCACTC +TTCCGTTCC------ACCGTCAAATCCTCCGCCTCCGCC--------------------- +---------GCCGCCGCCGCCAGACTCTCTCAAAAACTCCCCTCTCCTCCGCCTCCTCCT +CCTCCTCCTATACCTGTTACTGTTGCGGCGATTAAAGAGGACGGAGCCCTAGAACAGTGC +AGCACCTTGCTC---------GAGGCTTCTTCGAAA------------------------ +---------------------------------------------------TCG------ +------------------------------------------------------------ +---------AAGCGA------------CGTGAGGATTTTGTTACTGATTTGGTGCTCCGT +AGCTTGAGCCCAGGGTTCGAGTCTATCTCTGAA------------------------GAT +TCAGCAAACCAAATACCAAATGAGCTATCGTCAATACTTTGTGGAACTAAAGATTTAGAG +TCCTCCCATTCTTCTGACATCCTAAAGGTTGACAATGAGAAATCTATGGAACAGCTACTT +AATCTACCATGGTTTTCTAGTTTGTTCCACACTGGCACCTCACTACGTCGCAAAAAACTC +TTTCGGGAACGGAAGCAGAAGTGGATCTTTAAGAATACACAAAAAGCTCGGTTTTCCTGC +TTGGTCACTAGGTGTGCACAGAAGCTGGGACCAGATGCTACCATCCAGGTATTTGGCAAA +TTAGGCAGAGAAACTGGAGTGAAAGAGTACAATGCTCTTATAAAGCTATGCATAGAAACT +GGTAGGAAAACCGACGATGAAGAGGTTGCAGTGGAGCAGTGTTACAAGGCTTATCAGCTC +TTCACTTGGATGAAAGAAGAAGGTTTTCAGATAGAGGAGCAAACCTATGGACCATTTCTC +ATGTATCTTATTGACATGCATTTGAAGGAAGAGTTCTACTTTTTTCTTCCGTTAATCAAA +GAT------ACAAGTTCATCGGCGAGGTTTGGCTACTATGAGATGCTGCTTTTTGTTGAA +ATTGACGATGAAGAAAAAATTCATGAGCTTATTAGTCAAATTACCCAGGAAAAATATGAA +AAGGACCTCAATCTACAAGGTCTTGCAAAAAATTATTTGTTGGCACTATGTGAAAGGGAT +AGGAAGAATGAGCTCTTGGACCTCTTGGAAGTTGTAGACATTACGAAACTTCCACCG--- +GAAAGTATTGGTAGCATTTTGAAATCCCTGGGGAGGCTCTCATTGCAGTCCTTTGCAGAG +AAGTTCATTCTGGCATCCAAAGAAGATGGTAAAGGGTCCGAATGTATATCAGACTTCATC +TGTTTGTTCACTACCAGCATGACAAACTTTGTGGTTGAAGATATCATTCTAAAGTACAAG +GACATGCACACGAAGCTGGAGGTTTTGCCTTCTTCTGAATCATATGAGAAGCTTATCAAA +TTCTGCTGTGGTTCACACAAGGTGCACCTTGCTTTGGATGTGGTTGATGAGATGTGTGAA +GCCGGGTTTTCTTTGTCAACAGATACGCTTAACTCTGTACTGCATGCGTGTGAAGAAAGC +AGTGAGTTTTGTCTGGTTCGCCGGATATATTCAGCTCTCTGTTATCACAAGTTGATGCCG +AATAGTGAAACATTCAGAAGCATGATAAACTTATTCGTTAGAATGAAAGATTTTAATAGA +GCATATGACATGCTGACGGAGTTGGAGAAAGTGAACTTAATGCCTACGACTAGTATGTAC +AACACTATAATGGGTGGCTACTTCAGAGAGGGAAACACTGTCAACGGTTTTAAGGTTTTG +AAAGAAATGGAGAAGGCCGATGTCAAGCCAGATTGCCAGACTTATGGCTATCTTATTAAC +AACTCAGAACGCGAGGAAGATATCATCAAGTATTATGATGAAATGAAGTCGTCAGGAGTG +ACCTTGACAAAGCATGTTTTCATGGCACTGATAAATGCATATGCCAATCGTGGAGAATTT +GAGAAGGCAAAGCAGGTAGTTTTTGACAAAGGAGTACCTCTGAAGAACATAAATGAAATT +AGAAGTGCCCTTGTGTCTGCTCTTGCATCACATGGTAAAATATCTGATGCCTTTGACGTA +TATGAACAAATCAGGCAAAGTGGTTCAACTGTAGAGCCAAAGGCCTTGGTCTCTCTCGTG +GAATTCACTGAATCAGAAGGACAACTGCCTAGATTACTTCAGATTATGGAGGAACTGACT +ACTGATCTAGTTTATTGGATTGATGGTTGTTGCAGAGTCATTTTGTATTGCATAAGACAC +AAAGATATAAGGTCTGCGGTTGATTTGTTAAAGAAGCTCAAGGACGCGTTTAATGATGAT +GAACTGGCTGGTGAAGTTCTTTTTGATGAGGTCTTTTCTCAAGTTGCAGAGATGGAGCCA +TCAGGTTTACGATTGGGCCTTGACTTGCTTCAAACAATCAAGAAAGAACTTAAAATTCGT +CCTTCTAGGAAATGCCTAGATTTTTTACTTAGTGCTTGTGCTGACGCAAAGGATGCAAAG +AGTGCCCTCTTGATATGGAAGGAATACGAAATGGCTGGCCTACCTTACAATCTTGTTACC +TCCTTAAAGATGTATCAGGCCCTTATGGCATCTAGAGACTTTGAGTCGGCTGCTAAGGTG +CTGACTAGAATACCAGTAGATGACTCCCATGTCCGATCTATCCTCTTTGCTTGTGAAGCT +ACTTAT------GGTATTCCTACTAAAAAAGGTACCAGCAACAAGATGATTAGGACACTG +AAGATGAAA---GTTTAG diff --git a/example_files/manuscript_example/test3.fa b/example_files/manuscript_example/test3.fa new file mode 100644 index 0000000..09b8f22 --- /dev/null +++ b/example_files/manuscript_example/test3.fa @@ -0,0 +1,306 @@ +>s1 +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +---------------------------------------------atgacaaactgggat +ctcgatgatccatctgcctctgaagtggctagtcatggcaaagcattggaggatgattct +aacttgccttggtttactactttgttcaatagcagcacaccactgcgtcgtaaagagtta +tctcaggatcgaaagaataaatggatcttcaagaacacccaaaagctacgttttgataag +ttggttaatttgtgctcggataaagtcggatcaggttcaacttttgacgtgttatataaa +ttaggtcgagggacaggtttgaaagagtataatgctttcataaaaacttgcttagagaca +gcaagaaattgtaatgatgagaaggtccagatggagcatattttgcaggcataccgactg +cttcgattaatgaaggaacgaggttttccaatagaagaggaggcatttggcccattttta +atgttactaattgacatgcatatggatgatcaatttttaatccttcttgagattatcaaa +gatgaagatcctagtttacatccacgattaggctactatgagatgcatttttggattgag +atgaataatgaagaaaaggttcatgagttttgccaacgtatttcttctggtgagagtgaa +atgggatccttattgcac---------gaaaattatttgttggcactgtgtgaaagagat +aggaagaaggagcttcttcagttgctagacatcatagacataaccagagtgtcgtcattg +gataatgtagctagcattttcagatccctggggcggctatcattggaagcttttgcagag +ttgtttgttttggtattgaaagattgcggtcataaggcccaaagtatttcagatttgatc +tactcctatgcgtctagctcaaaaaataca------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +---------------acg +>s2 +------------------------------------------------atgccccgcacc +aacgtc---------------------aaaattctcagc---------------accctc +tttcgcacc------gccgttaaagtaacctcctctgctccttccatcgttaaagacgcc +gttacttccactaaaaaaaagaaattacgctctcaccctccccctcctccacctccacct +ccacctcct---------------cctcct------------------------------ +---------------------cctcctccttcttca------------------------ +---------------------------------------------------ggg------ +------------------------------------------------------------ +---------gtaaaa---------------------------tcgtctttgcgcaagaaa +cctcctcaacaaaattatcaaacttcctccaacacctctaatccccttccagaaggagat +tcagttgagcaagcaacacatggcatatcttcaatattgtgtggtaccacagactgggaa +atcgatgatccatctgacacggaagtggctaatgatgacaaggcattagaagatgattct +gacttgccttggttttccaatctttttaatagcagtatgtcactgcgtcgtaaagagtta +tctcgggatcgaaaaaataaatggattttcaagaacacccaaaagctacgttttgataag +ttggttaatatgtgcttagataaagtgggatcaggttcaacttttcatgtgttatataaa +ttaggtcgagggacaggtttgaaagagtataatgctttcataaaaggttgcatagagaca +gctagaaatagcaaagatgaattgtttcaggtacaacagatcttggaggcatatcggctg +cttcaattgatgaaggaacggggttttccaatagaagaggatgcatttggcccatttttc +ttgtatctaattgacatgcatatggatgaacagttttcacttcttcttgagattgttaaa +gaggaggatcctaatttacatccacgattaggctactatgagatgcttttttggattgag +atgaataacgaagaaaaggttcaggagctttgccagcagattgccactggtgagagcgaa +ttgggaacattattgcat---------gaaaattatttgttggcactgtgtgaaagagat +agaaagaaggagcttcttcagttgctagacatcatagacataaccagagtttcctcgttg +gataatgtagctagcatatttagatctcttgggcggctatcattggaagcttttgcagag +ttgtttgtcttggtattgaaagattgtgatcacagggctgaaagtatttcagatttaatc +tactcttatgcatctagcttgagaaatacatcggttgaggaagttattttgaaattcaaa +gagatgcatggaaaaatggatcttgctcttttggctggatcatatgagaaactcattgat +ttttgtcttgattccactaaggtctatatggctttggatttagttgatgagatgtgtgaa +gcaggtttatccttatccacgggagcactcaatgccatatgtcatgcctgtgaggagagc +tgtgaatatatgctggctcgtcggatctataaaatgctctgtgaccacaaattgaagcca +aatactgagacgttcagaagtattataaacttgaacgttagaatgaaagattttgataat +gcatatgccgtgttaaaagatttgggaaagatgaatttggtgccttcagcaagtatgtac +aatgctatattggctggttgttatagagagaaaaacaagaatggtgtgctcagggttctc +aaagaaatgaaagatgcggatgtcaaaccagattctcagactttcagctatctgataagc +aactgtgcatgtgaagaagacattattaagtattatgaacaactggaggatgttggtgtt +aatccaacaaagcaagttttcatggcactcataaatgcatatgctgcaactggccaattt +gagaaggccaaggaggttgtcaaagagaaaggaatacttacgaagaacttgcatgaaatc +aaaagtactcttgtctcgtctctggcatcacatggaaaaatgtctgatgcactggccatt +tacaaggaaatgaaaaagaatggtttctctttggagccaaaggccgttatatctctcatc +gaaaaccagcattataaaggagacttgaaggtattgctcagcttgcttgaagatttgaat +---gatccacaatattggattgatggttgctgcagacttatcttgtactgtgttcggaac +aaggaattgaggactgctgttgatttgttgaaaaaactttctgataattgtcgggatgat +gatttggctagagaagttatttttgatgaggtattttcacacattgcggattcagagcat +cctgatttgcagatcggaatagacttgctccaagctattaaggaggatctgaagttgtac +ccttcacgaaaatgtctggattttctacttagtgcttgtgttaatgggaaggatctccag +aaagcccgattggtgtggaaggagtataagataaatggtcttccatacaacattttaagc +tacttgaggatgtaccaggcattcctgatttcaggagatgcagcagcagccaaacatttt +ctgagtaaaataccgaaagatgatccacatgttctgtctgtgcttcacgcgtgccgtgta +acctat------gcaaagcccaaggaggaa---------aaaaagaaggaaaagaaaaag +aaaaagaagaaaaaaaca +>s3 +------------------------------------------CCAAAAACGCCACTTGAT +CCTGCGGCAGAGATAAAGCAGCGCCTCAAAACCCTGACATTGCGATCGAAGAAAGCAGTC +CTAAAGCAG------AGCGTCCAG---ACCGCCCTTCCT--------------------- +---------GCAGTTTCCGTTGATATAACATCCAAGACAGAAGCGCCAAGTCTTCCTGTG +------------------------------------AAGAATGAAACTCTAAAGCAGTTT +GTCTGTTTGATA---------AACCCTGTTTCTTCG------------------------ +---------------------------------------------------TCG------ +------------------------------------------------------------ +---------TCCCAG------------CAC------TCGTTCCAGGATGAACTTATGCGT +AGCTTTACTGACGGT---------TCGTCAAAT------------------------GGT +TCAGCCAAGATAGTAACAAATGAGATATCTGCAATATTATGCGGTGGCAAGTATGCAGAG +AGTGTTTGTTCCATTGACTTA---GAGGTTGAAAGTGATAAACCTATTGAAAAGGAACTT +GAGCTACCATGGTTTGCGACTATGTGTCATAGTGGTGAATCATCATGCCGGAAAGAAGTT +TCTCGTGAGCGGAAGCAGAAATGGATCTTCAAGAATACCCAACAAAGTTGGTTTCAAAAG +CTGATAATAATGTGTGGTGAAAAACTGGGTTCAGATGCTATCATGAAGATGCTTGCTAGA +TTAGGCCGGGAGACTGGTCTAAAAGAATACAGTGCATATATAAGACTTTGTGTAGAAACT +GCTAGGAAAACTGAAGATGAAGAAGTCCAGTTGGAGCAGACTTATCTAGCTTATCAGCTT +TTCAGAAAAATGAAGGAAGCCGGACTTCCTATGGAGGAGGAAACTTATAGCCCATTTCTT +ATGTATCTGATTGATATGCGGATGGAAGAGGAGTTCTATTTTTTCCTTGCAGTCATCAAA +GATGAGGATTCTACTTGCAATGCAAGATTTTGCTATTATGAATTACTGCTCTTGATTGAC +GTGGGCAATGAAAACAAAATTCACGAGCTTATTCATCAGGTTACTGCAGGGGATACTGAA +GGGCGATCTGCAATACAA---------GAAAATTATCTGTTGGCATTATGCCAAAGGGAC +AGGAAGAATGAACTTTTGGAACTGTTGGAAACTATTGATGTTACTGGTCTTTCATCA--- +GCCACAGCAGTTAGTGTTTTCAAATCCCTGGGGAGGCTAGAACTGCAGCCTTTTGCAGAG +AAGTTTATTTTGACATTCAAGGCAAGCGGTCATGGGGCTGAAAGCATATCAGACTTCATC +TTTTCCTATGTTACTAGCATGAAAAAACTAGCGGTTGAGGATATGATATTGAAGTATGAA +GACATGCATACAAAAGCAGATATTTTGCCTTCATCTACACTCTATGAGAAGCTTATTAAT +TTCGCTTGTAGTTCTCTTGAGGTACATTCTGCTTTGGATCTGGCGGATCGGATGTGTGAA +GCAGGATTTACCATATCAGCCGAAACAGTTAATGGCATCTTACATGCATGCGAAGAAAGC +TATGACTATGATTTGGTTGGACGAATATATTCGGTTCTCTCACGCCACAACTTGAAGCCA +GATAGTGAGACCTTCGAGAGCATGGTTAATTTGTGTGTTAGAATAAGAGATTATGCCGGT +GCTCGCAAAATGCTGAACGAATCGGAGAAAAGGAATCTAGGTCCTACGGCCACTATGTAC +AATGCTATAATGGGCGGCTTTTACCGCGAGAAGAATGTCGTCGGAGCGTTGGCAGTTCGT +AGAGATATGGAAAAGAAAAACGTGAAACCTGATCCTCACACCTACTCTTACCTCATTGGC +AACTCTGAGTGCTTGGAAGATGTTATCAAGTACTACGAGGAAATGAAGTCCACAGGAGTC +CAAGTTACAAAAATTGTGTACATGGCACTTATAAATGCCTATGCTGCTTGTGGAGACTTT +GAGAAAGCCAAAAAGGTAGTCCTGGACAACGGAATACCCAAAAGGAACTTAAATGAAGTC +AGAAGTGCGCTTGTTTCTGCTCTTGCATCACATGGTCGAATGTCTGATGCTCTTGAGATT +TATGATAAAGTGAAGCAAATTGGTTTCAGTTTAGAGCCAAAAGCCATCATATCTCTCATC +GAATACATGCAACCAGAA---GAACTGGGCAGACTATTCAACTTGATTGACGAACTGAGG +---GATCGATACTATTGGGTAGATGCTTGCTTCAGAGGCATTGCTCTTTGTGTTAGAAAC +AAAAAACTAAGGTCTGCTATTGACTTGATTAAGAAGCTCTTGAATAAATTGCATGATGAG +AAATTTGCAGTTGAATTTCTTCTTGATGAGGTATTCTTCCAAATTGCAGAGCTGGAGCCT +CCAGATCTGCAGATTGGTTTAGACCTGCTTACGGCGATAAAGGAAGAGCTTAAGCTTCAG +CCTTCAAGGAAGTCTCTGGATTTTCTGCTTAGTGTTTGTGTCAACACAAAGGATGTGAGG +AGTTCACATCTGATATGGGAGGAGTACCAAAAGGCAGGGTTTCCTTACAATGTTCTAAGC +TTCCTAAGGATGTATCAGGCACTCCTGGCTGCAGGTGATTTAACATCTGCTGCAAAAGTG +CTAAATAGAATGCCGAAAGATGATGTCCATGTCCGAATGCTCATCAGCTCATATCAGTCT +ACTTACATGTCTGCT------------AGA---------AATGGCAAGAAAGAGAAGATA +AAGTTGAGTTTGAAATGA +>s4 +---------------------------------------------GAAATGCCCGCCTCA +GGAGCC---------------------AAAAACCTAAGC---------------TCATTG +TTCCGCTCC------GCCGTTAAA---ACCGCCACCGCC--------------------- +---------GCTAAACCAGCTAAGAAAACTTCC---------------------CCACCG +------------------------------------GAGGACACAGCCCTGAAGCAATAC +CTCTCTCTGCTCGGAACTTCATCCCCGATCACGTCT------------------------ +---------------------------------------------------ACTTTAAAA +TCGGCACCACATAAACCTCAGCTCTCTGAGAAGCCACCGAACTCATCACTTCCTCAGTCG +AAGCGAGAGACTAAA------------CAC------TCAGTCAGTGATTTGGTCCTCCTA +AGCCCGAAACAAGGAGCCACAAAGAGCCCTGAG------------------------GAT +TCAGCAAAGGAGATATCCAGAGAGATATCGGCAATATTGTGTGGTAGCAGAGACTTGGAT +TCGTCT---------GACTTACGAGAGGCTGACACAAGGAAACCTATAGAAAAGGTTCTT +GAGCTGCCATGGTTTTCAAATTTGTGTCACAACGGCACATCATTGCGTCGAAAAGAGATA +TCACGGCGACGGAAACAAAAATGGATATTCAAGAATACCCAAAAAAATTGGTTTGGCCGG +TTGGTGACAATGTGTGCAGAAAAACTTGGTGCAGATGCTACTATTCAGGTATTTGGTAAA +TTAGGCCGAGAGACTGGTTTGAAAGAGTACAATGCACTCATAAGACTCTGCATAGAAACA +GCTAAAAAAAGCAACAATGAAGAAGTTTCGCTGCAACAGATTTACAAGGCTTATCAGCTT +TTCAAATCAATGAAGGAGCAGGGTTTTCAGATAGAAGATGAAACTTCTGGTCCATTTCTC +ACGTATCTGATTGACATGCATATGATAGAAGAGTTTTATTTTTTTCTTGAAATCATCAAA +GATGAGAATCCTAGATCATATGCAAGATTAGGTTACTATGAGATGCTGCTTTGGATAGAA +GTGGATAATGAAGACAAAGTTCATGAGCTTTTAGACCAGATTACTGCTGGGGATGGTGAA +GGGGCATCTGATTTACGA---------GAAAATTATTTGTTGGCTCTATGTGAAAGAGAC +AGGAGGAAGGAACTTTTGGAACTTTTAGAGGTTGTAGATGTAACTAAACTTTCATCG--- +GATAATGTAGTTAGAATTTTCAAGTCTTTGGGAAGGCTATCATTGCAGTCTTCTGCGGAG +AAGTTTATTTTGACATTGAAAACAAATGGTCATGGGGCTGAGAACATATCAGACTTCATC +TACTTCTATGCTACCAGCATTTCAAATTTAGCGGTTGAAGATACTGTTTTAAAGTACAAA +GGCATGCATGCAAAACTGGAGGTGTTGCCTACGTCTATCTCATATGAGAAACTTATTAAG +TTCTGTTGTCATTCACTCAAGGTGCATCTAGCTTTGGATGTAGCTGACCAAATGTGTCAA +GCAGGATTGACCATATCAACAGAAACACTTAATTACATCTCACAAGCATGTGAAGAAAGT +TGTGAGTTTAATTTGGTTCGTCGGATCTATTCAGTTCTCCATTCCCATAATTTGAAGCCA +GACAGTGAGACCTTCCGGAGTATGATAAATTTGAATGTCAGAATGAAAGATTATGATGGT +GCATATATCTTGCTGAAGGATTTGATGGAAATGAATTTAATGCCTACAGCAAGTATGTAC +AATGCCATAATGGCTGGCTATTTTCGAGAGAAAAACATTGTTGGCGGGTTGAGGGTTCTC +AACGAAATGGAAAAAGCAGATGTCAAACCAGATTCCCAGACTTACTGCTATCTCATAGGC +AACTCTGAATGTGAGGAAGATATTATTAAGTATTATGAAGAAATGATGTCTACTGGAGTC +CAAGTCACAAAGCATGTTTTCATGGCACTTGTAAATGCATATGCCACATGTGGCGAGTTT +GACAAGGCGAAACAGGTAGTATTAGACAAAGAAGTACCTGTAAAGAACTTAAATGAAATC +AAAAGTGCGCTTGTCTCTGCTCTTGCATGTCATGGGCAAATGTCTGATGCCCTTGCCATT +TATGACGAAATCAAACAGGGTGGTTGCAGTTTAGATCCGAAGGCTATTATATCTCTCATT +GAACACATGCAATCAGAAGGAGAATTGTCTAGATTACTTGAGCTGCTTGAGGAATTAAGT +---TGTCCAGGCTATTGGATTGATGGTTGCTTCAGAGTCATCTTATATTGTGTTAGAAAC +AAGCATTTAAGGCCTGCCATCGATTTGCTCAGGAAAATCTGGAATAAATTGCACGATGAT +GAAGTGGCAGGCGAAGTTCTTTTTGATGAGGTATTTTCCCAAATTGCGGAGATGGAACCC +CCAGATTTGCAGATTGGATTGGAATTGCTTGAAGCCATAAAGGAAGAGCTTAAACTTCGT +CCTTCACGGAAATGTCTGGATTTTCTTCTTAATGCTTGTGTCAATGCAAAGGATTCAAAG +AGTTCTCTTTTGATTTGGAAGGAATATGAAAAAGCTGGCCTGCCGCACAATGTTTTAAGC +TTCTTAAGGATGTATCAGGCCCTTTTGGCTTCTGGGGATTCAAAATCGGCTTCAAATTTA +CTGAACCGAATACCGAAAGAGGATTCTCATGTTCGTTCCGTCATCAGCGCATGCCAATCG +ACCTAC------GGT------------AAG---------AACCGTAAGAACGAGAAGAAA +AAGAAGAAT---AGTTGA +>s5 +------TCGTTAGTTCTTCTAGTTCTAGGGTTTCAAAATTATCGAAATTTCTTTTGGCAT +------------------------------TTTCTCTCT---------------TCATTT +TTTTTTTCCTTTTTGGTTCCCAAACCTCCTCTGACTCTC--------------------- +---------CCTCTTCCCCAATTTCTCATTTCTCGTTTTCCCTCCCTTCCTCCTCCTCCT +CCTCCTAGT---------------ACTACGATTGCTGATGACGCTGCCCTAAAGCAACAT +GTCTCCTTGCTG---------GTTGCTTCCTCTTCAACTCCCACTCCCGAAGCGACGGTG +ATGACGAAGACTGCGGAGTCTGGTGTCGGTGAGGCGAATAAACTGAAGGGTTCT------ +------------------------------------------------------------ +---------AAAAGGGAGCGAGTTGTTAACGAGGACTCCATTAGCTGTTTGCTCCTCCGA +AGCTTGAACCCAAGCACCGAGACGAATTCA------------------------------ +------------------------------------------------------------ +---------------------------------AAAGAGAGATCCGTGGAGAAGCAGCTT +GATCTACCATGGTTATCTAATTTGTTAAATATTGATGCCTTTCACCGTCGCAAAGAACTA +TCTCGTGAGCGAAAGCAGAAGTGGATATATAAGAATACACAAAATGTTCGGTTTTCATGG +TTAGTCAGAAAATGTGCCAAGAAGCTTGGAGTAGATGCTGCTATCCAGGTTTTTGGTAAA +TTACGCCCGGGAACTGGCAGAAAGGAGTATAACACACTTATAAGGCTATATATAGATACT +GCTAGGAAAGCTGAAGATGAAGAGGTTGCTTTGGATCAGAGTTACAGGGCTTATCAGCTC +TTCAAATTGATGAAGGAGGAAGGTTTCAATATAGAAGAGGAAACTTATGGTCCATTCCTC +ATTTATCTCATTGACATGCATATGACAGATGAATTCTATTTTTTTCTTCCTCTTATCAAA +GATGAGAATGCAAGTTCAATGGCAATGTTGGGGTACTATGAAATGTTGCTTTTGATAGAA +GTGGGTGATGAAGACAAAATTCATGAGCTCATCTCCAAACTCACCCATGAGAAATGTGAA +CATGACCCCAATCTACAAGCTCTTGCAGAAAATTATTTGTTAGCACTGGGTGAACGAGAC +AGGAAGAAGGAATTCTTACAACTCTTGCAGGTTATAGACATTACTAACCTTCCATTA--- +GACAATATTGGTAGGATTTTTAAATCCTTGGGCAGGCTGTCATTGCAATCTTTTGCTGAG +GATCTTATTTTGGCATTCAAAACAAATGATCAAGAGTTTGAAATCCTGTCAGACTTCATC +TATTTGTACTCTACCAGTGTGACAAATTTATCGGTTGAGGATGCCATTTTGAAGTACAAG +GACATGCATGCGAAGCTGGAGGTTCTGCCTTCATCCAAATCATATGAAGAGCTTATCAAG +TTCTGCTGTGGTTCACTGAAGGTGCATCTAGCTTTGGATGTGGCTGATCAGTTGTGTCAA +GCTGGATTGTCCTTATCAACAGAAACACTTAATACAATATCACGTGCATGTGAAGAAAGC +AGTGAGTTTTATCTGGTTCGCCAGATCTATTCAATTATCTGTTGTCATAACTTGAGCCCA +AATTCTGAAACATTCAGGAGCATGATAAATTCAAGTGTTAGAATGAAAGATTTTGATGGA +GCCTATGACATGCTGAAGGTGTCGGAAAAAAAGAACTTAATGCCTAGTGCAAGTATGTAC +AATGCTATAATGGGTGGCTACTTCAGAGAGGGAAACACTGTTTCCGGATTCGAGGTTCTC +AAACAAATGGAGAAGGCAAATGTGAAGCCAGATTGCATTACTTACAGCTATCTCATTGGA +AACTCGAAATGTGTGGATGATATCATTAAGTATTTTGAAGAAATGAAGACATCAAGTGTG +ACCCTGACGAAGCATGTTTTTATGGCAATGATAAATGCATATGTCACTTGTGGAGAGCTT +GAGAAGGCAAAACAGGTAGTCTTTGACAAAGCAGTTCCTGAAAAGAATGCAAATGAAATC +AGAAGTGCCCTTTTATCTGCTCTTGCATCAAATGGGAAAATTTCTGATGCTCTTGACATA +TATGAAGAAATCAAGCAGAGTGGTTCATCTGTGGAGCCAAAAGCCTTGATCTCTCTCTTG +GAACACATTCAAGTAGAGGGAGAACTGCCTAGATTACTTCAGTTCCTTGAGGAATTGAGT +---GACCCAGATTATTGGGCTGATGGTTGCTTCAGAGTCATATCATATTGCATCAGACAC +AAAGATATACAGTCTGCTGTTGATTTGCTGAAGAAACTCAAGGATGCATTTGATGATGAT +GAATTGGCAGGGGAAGTTCTTTTTGATGGGGTCTTTTGTCAAATTGCGGAGATGGAGCCT +TCAGGTTTACAAATTGGGCTTGAATTACTTCAATCAATAAAGGAAGACTTGAAGCTTCTT +CCTTCTAGGAAATGCCTGGACTTTTTACTGAGTGCTTGTGTCAAGGCAAAGGATGTAAGG +AGTTCTCTTATGATCTGGAAGGAATATCAAATGGCAGGCTTACCTTATAATCTTCTAACC +TTCTTGAGGATGTATCAGGCCCTTTTGACATCTGGGGATTTCAAATCTGCAGCAAAGATG +CAGGATAAATTACGGAAAAATGAGCACCATATTCATTCTATCGTTGTTGCTTGCGAAGAT +GCTTTC------AGCAAGCCTACTGAAAAA---------AATAAGGACACGGCTAGGAAA +AAGAAGAAA---TTTTAG +>s6 +CGATCTCCCCCTCCTCTGCCCCCATTCACCTACTCATCCCGAAATGAAATGCCAGCCTCT +------------------------------CACCTAAGC---------------TCACTC +TTCCGTTCC------ACCGTCAAATCCTCCGCCTCCGCC--------------------- +---------GCCGCCGCCGCCAGACTCTCTCAAAAACTCCCCTCTCCTCCGCCTCCTCCT +CCTCCTCCTATACCTGTTACTGTTGCGGCGATTAAAGAGGACGGAGCCCTAGAACAGTGC +AGCACCTTGCTC---------GAGGCTTCTTCGAAA------------------------ +---------------------------------------------------TCG------ +------------------------------------------------------------ +---------AAGCGA------------CGTGAGGATTTTGTTACTGATTTGGTGCTCCGT +AGCTTGAGCCCAGGGTTCGAGTCTATCTCTGAA------------------------GAT +TCAGCAAACCAAATACCAAATGAGCTATCGTCAATACTTTGTGGAACTAAAGATTTAGAG +TCCTCCCATTCTTCTGACATCCTAAAGGTTGACAATGAGAAATCTATGGAACAGCTACTT +AATCTACCATGGTTTTCTAGTTTGTTCCACACTGGCACCTCACTACGTCGCAAAAAACTC +TTTCGGGAACGGAAGCAGAAGTGGATCTTTAAGAATACACAAAAAGCTCGGTTTTCCTGC +TTGGTCACTAGGTGTGCACAGAAGCTGGGACCAGATGCTACCATCCAGGTATTTGGCAAA +TTAGGCAGAGAAACTGGAGTGAAAGAGTACAATGCTCTTATAAAGCTATGCATAGAAACT +GGTAGGAAAACCGACGATGAAGAGGTTGCAGTGGAGCAGTGTTACAAGGCTTATCAGCTC +TTCACTTGGATGAAAGAAGAAGGTTTTCAGATAGAGGAGCAAACCTATGGACCATTTCTC +ATGTATCTTATTGACATGCATTTGAAGGAAGAGTTCTACTTTTTTCTTCCGTTAATCAAA +GAT------ACAAGTTCATCGGCGAGGTTTGGCTACTATGAGATGCTGCTTTTTGTTGAA +ATTGACGATGAAGAAAAAATTCATGAGCTTATTAGTCAAATTACCCAGGAAAAATATGAA +AAGGACCTCAATCTACAAGGTCTTGCAAAAAATTATTTGTTGGCACTATGTGAAAGGGAT +AGGAAGAATGAGCTCTTGGACCTCTTGGAAGTTGTAGACATTACGAAACTTCCACCG--- +GAAAGTATTGGTAGCATTTTGAAATCCCTGGGGAGGCTCTCATTGCAGTCCTTTGCAGAG +AAGTTCATTCTGGCATCCAAAGAAGATGGTAAAGGGTCCGAATGTATATCAGACTTCATC +TGTTTGTTCACTACCAGCATGACAAACTTTGTGGTTGAAGATATCATTCTAAAGTACAAG +GACATGCACACGAAGCTGGAGGTTTTGCCTTCTTCTGAATCATATGAGAAGCTTATCAAA +TTCTGCTGTGGTTCACACAAGGTGCACCTTGCTTTGGATGTGGTTGATGAGATGTGTGAA +GCCGGGTTTTCTTTGTCAACAGATACGCTTAACTCTGTACTGCATGCGTGTGAAGAAAGC +AGTGAGTTTTGTCTGGTTCGCCGGATATATTCAGCTCTCTGTTATCACAAGTTGATGCCG +AATAGTGAAACATTCAGAAGCATGATAAACTTATTCGTTAGAATGAAAGATTTTAATAGA +GCATATGACATGCTGACGGAGTTGGAGAAAGTGAACTTAATGCCTACGACTAGTATGTAC +AACACTATAATGGGTGGCTACTTCAGAGAGGGAAACACTGTCAACGGTTTTAAGGTTTTG +AAAGAAATGGAGAAGGCCGATGTCAAGCCAGATTGCCAGACTTATGGCTATCTTATTAAC +AACTCAGAACGCGAGGAAGATATCATCAAGTATTATGATGAAATGAAGTCGTCAGGAGTG +ACCTTGACAAAGCATGTTTTCATGGCACTGATAAATGCATATGCCAATCGTGGAGAATTT +GAGAAGGCAAAGCAGGTAGTTTTTGACAAAGGAGTACCTCTGAAGAACATAAATGAAATT +AGAAGTGCCCTTGTGTCTGCTCTTGCATCACATGGTAAAATATCTGATGCCTTTGACGTA +TATGAACAAATCAGGCAAAGTGGTTCAACTGTAGAGCCAAAGGCCTTGGTCTCTCTCGTG +GAATTCACTGAATCAGAAGGACAACTGCCTAGATTACTTCAGATTATGGAGGAACTGACT +ACTGATCTAGTTTATTGGATTGATGGTTGTTGCAGAGTCATTTTGTATTGCATAAGACAC +AAAGATATAAGGTCTGCGGTTGATTTGTTAAAGAAGCTCAAGGACGCGTTTAATGATGAT +GAACTGGCTGGTGAAGTTCTTTTTGATGAGGTCTTTTCTCAAGTTGCAGAGATGGAGCCA +TCAGGTTTACGATTGGGCCTTGACTTGCTTCAAACAATCAAGAAAGAACTTAAAATTCGT +CCTTCTAGGAAATGCCTAGATTTTTTACTTAGTGCTTGTGCTGACGCAAAGGATGCAAAG +AGTGCCCTCTTGATATGGAAGGAATACGAAATGGCTGGCCTACCTTACAATCTTGTTACC +TCCTTAAAGATGTATCAGGCCCTTATGGCATCTAGAGACTTTGAGTCGGCTGCTAAGGTG +CTGACTAGAATACCAGTAGATGACTCCCATGTCCGATCTATCCTCTTTGCTTGTGAAGCT +ACTTAT------GGTATTCCTACTAAAAAAGGTACCAGCAACAAGATGATTAGGACACTG +AAGATGAAA---GTTTAG diff --git a/example_files/manuscript_example/test4.fa b/example_files/manuscript_example/test4.fa new file mode 100644 index 0000000..09b8f22 --- /dev/null +++ b/example_files/manuscript_example/test4.fa @@ -0,0 +1,306 @@ +>s1 +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +---------------------------------------------atgacaaactgggat +ctcgatgatccatctgcctctgaagtggctagtcatggcaaagcattggaggatgattct +aacttgccttggtttactactttgttcaatagcagcacaccactgcgtcgtaaagagtta +tctcaggatcgaaagaataaatggatcttcaagaacacccaaaagctacgttttgataag +ttggttaatttgtgctcggataaagtcggatcaggttcaacttttgacgtgttatataaa +ttaggtcgagggacaggtttgaaagagtataatgctttcataaaaacttgcttagagaca +gcaagaaattgtaatgatgagaaggtccagatggagcatattttgcaggcataccgactg +cttcgattaatgaaggaacgaggttttccaatagaagaggaggcatttggcccattttta +atgttactaattgacatgcatatggatgatcaatttttaatccttcttgagattatcaaa +gatgaagatcctagtttacatccacgattaggctactatgagatgcatttttggattgag +atgaataatgaagaaaaggttcatgagttttgccaacgtatttcttctggtgagagtgaa +atgggatccttattgcac---------gaaaattatttgttggcactgtgtgaaagagat +aggaagaaggagcttcttcagttgctagacatcatagacataaccagagtgtcgtcattg +gataatgtagctagcattttcagatccctggggcggctatcattggaagcttttgcagag +ttgtttgttttggtattgaaagattgcggtcataaggcccaaagtatttcagatttgatc +tactcctatgcgtctagctcaaaaaataca------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +------------------------------------------------------------ +---------------acg +>s2 +------------------------------------------------atgccccgcacc +aacgtc---------------------aaaattctcagc---------------accctc +tttcgcacc------gccgttaaagtaacctcctctgctccttccatcgttaaagacgcc +gttacttccactaaaaaaaagaaattacgctctcaccctccccctcctccacctccacct +ccacctcct---------------cctcct------------------------------ +---------------------cctcctccttcttca------------------------ +---------------------------------------------------ggg------ +------------------------------------------------------------ +---------gtaaaa---------------------------tcgtctttgcgcaagaaa +cctcctcaacaaaattatcaaacttcctccaacacctctaatccccttccagaaggagat +tcagttgagcaagcaacacatggcatatcttcaatattgtgtggtaccacagactgggaa +atcgatgatccatctgacacggaagtggctaatgatgacaaggcattagaagatgattct +gacttgccttggttttccaatctttttaatagcagtatgtcactgcgtcgtaaagagtta +tctcgggatcgaaaaaataaatggattttcaagaacacccaaaagctacgttttgataag +ttggttaatatgtgcttagataaagtgggatcaggttcaacttttcatgtgttatataaa +ttaggtcgagggacaggtttgaaagagtataatgctttcataaaaggttgcatagagaca +gctagaaatagcaaagatgaattgtttcaggtacaacagatcttggaggcatatcggctg +cttcaattgatgaaggaacggggttttccaatagaagaggatgcatttggcccatttttc +ttgtatctaattgacatgcatatggatgaacagttttcacttcttcttgagattgttaaa +gaggaggatcctaatttacatccacgattaggctactatgagatgcttttttggattgag +atgaataacgaagaaaaggttcaggagctttgccagcagattgccactggtgagagcgaa +ttgggaacattattgcat---------gaaaattatttgttggcactgtgtgaaagagat +agaaagaaggagcttcttcagttgctagacatcatagacataaccagagtttcctcgttg +gataatgtagctagcatatttagatctcttgggcggctatcattggaagcttttgcagag +ttgtttgtcttggtattgaaagattgtgatcacagggctgaaagtatttcagatttaatc +tactcttatgcatctagcttgagaaatacatcggttgaggaagttattttgaaattcaaa +gagatgcatggaaaaatggatcttgctcttttggctggatcatatgagaaactcattgat +ttttgtcttgattccactaaggtctatatggctttggatttagttgatgagatgtgtgaa +gcaggtttatccttatccacgggagcactcaatgccatatgtcatgcctgtgaggagagc +tgtgaatatatgctggctcgtcggatctataaaatgctctgtgaccacaaattgaagcca +aatactgagacgttcagaagtattataaacttgaacgttagaatgaaagattttgataat +gcatatgccgtgttaaaagatttgggaaagatgaatttggtgccttcagcaagtatgtac +aatgctatattggctggttgttatagagagaaaaacaagaatggtgtgctcagggttctc +aaagaaatgaaagatgcggatgtcaaaccagattctcagactttcagctatctgataagc +aactgtgcatgtgaagaagacattattaagtattatgaacaactggaggatgttggtgtt +aatccaacaaagcaagttttcatggcactcataaatgcatatgctgcaactggccaattt +gagaaggccaaggaggttgtcaaagagaaaggaatacttacgaagaacttgcatgaaatc +aaaagtactcttgtctcgtctctggcatcacatggaaaaatgtctgatgcactggccatt +tacaaggaaatgaaaaagaatggtttctctttggagccaaaggccgttatatctctcatc +gaaaaccagcattataaaggagacttgaaggtattgctcagcttgcttgaagatttgaat +---gatccacaatattggattgatggttgctgcagacttatcttgtactgtgttcggaac +aaggaattgaggactgctgttgatttgttgaaaaaactttctgataattgtcgggatgat +gatttggctagagaagttatttttgatgaggtattttcacacattgcggattcagagcat +cctgatttgcagatcggaatagacttgctccaagctattaaggaggatctgaagttgtac +ccttcacgaaaatgtctggattttctacttagtgcttgtgttaatgggaaggatctccag +aaagcccgattggtgtggaaggagtataagataaatggtcttccatacaacattttaagc +tacttgaggatgtaccaggcattcctgatttcaggagatgcagcagcagccaaacatttt +ctgagtaaaataccgaaagatgatccacatgttctgtctgtgcttcacgcgtgccgtgta +acctat------gcaaagcccaaggaggaa---------aaaaagaaggaaaagaaaaag +aaaaagaagaaaaaaaca +>s3 +------------------------------------------CCAAAAACGCCACTTGAT +CCTGCGGCAGAGATAAAGCAGCGCCTCAAAACCCTGACATTGCGATCGAAGAAAGCAGTC +CTAAAGCAG------AGCGTCCAG---ACCGCCCTTCCT--------------------- +---------GCAGTTTCCGTTGATATAACATCCAAGACAGAAGCGCCAAGTCTTCCTGTG +------------------------------------AAGAATGAAACTCTAAAGCAGTTT +GTCTGTTTGATA---------AACCCTGTTTCTTCG------------------------ +---------------------------------------------------TCG------ +------------------------------------------------------------ +---------TCCCAG------------CAC------TCGTTCCAGGATGAACTTATGCGT +AGCTTTACTGACGGT---------TCGTCAAAT------------------------GGT +TCAGCCAAGATAGTAACAAATGAGATATCTGCAATATTATGCGGTGGCAAGTATGCAGAG +AGTGTTTGTTCCATTGACTTA---GAGGTTGAAAGTGATAAACCTATTGAAAAGGAACTT +GAGCTACCATGGTTTGCGACTATGTGTCATAGTGGTGAATCATCATGCCGGAAAGAAGTT +TCTCGTGAGCGGAAGCAGAAATGGATCTTCAAGAATACCCAACAAAGTTGGTTTCAAAAG +CTGATAATAATGTGTGGTGAAAAACTGGGTTCAGATGCTATCATGAAGATGCTTGCTAGA +TTAGGCCGGGAGACTGGTCTAAAAGAATACAGTGCATATATAAGACTTTGTGTAGAAACT +GCTAGGAAAACTGAAGATGAAGAAGTCCAGTTGGAGCAGACTTATCTAGCTTATCAGCTT +TTCAGAAAAATGAAGGAAGCCGGACTTCCTATGGAGGAGGAAACTTATAGCCCATTTCTT +ATGTATCTGATTGATATGCGGATGGAAGAGGAGTTCTATTTTTTCCTTGCAGTCATCAAA +GATGAGGATTCTACTTGCAATGCAAGATTTTGCTATTATGAATTACTGCTCTTGATTGAC +GTGGGCAATGAAAACAAAATTCACGAGCTTATTCATCAGGTTACTGCAGGGGATACTGAA +GGGCGATCTGCAATACAA---------GAAAATTATCTGTTGGCATTATGCCAAAGGGAC +AGGAAGAATGAACTTTTGGAACTGTTGGAAACTATTGATGTTACTGGTCTTTCATCA--- +GCCACAGCAGTTAGTGTTTTCAAATCCCTGGGGAGGCTAGAACTGCAGCCTTTTGCAGAG +AAGTTTATTTTGACATTCAAGGCAAGCGGTCATGGGGCTGAAAGCATATCAGACTTCATC +TTTTCCTATGTTACTAGCATGAAAAAACTAGCGGTTGAGGATATGATATTGAAGTATGAA +GACATGCATACAAAAGCAGATATTTTGCCTTCATCTACACTCTATGAGAAGCTTATTAAT +TTCGCTTGTAGTTCTCTTGAGGTACATTCTGCTTTGGATCTGGCGGATCGGATGTGTGAA +GCAGGATTTACCATATCAGCCGAAACAGTTAATGGCATCTTACATGCATGCGAAGAAAGC +TATGACTATGATTTGGTTGGACGAATATATTCGGTTCTCTCACGCCACAACTTGAAGCCA +GATAGTGAGACCTTCGAGAGCATGGTTAATTTGTGTGTTAGAATAAGAGATTATGCCGGT +GCTCGCAAAATGCTGAACGAATCGGAGAAAAGGAATCTAGGTCCTACGGCCACTATGTAC +AATGCTATAATGGGCGGCTTTTACCGCGAGAAGAATGTCGTCGGAGCGTTGGCAGTTCGT +AGAGATATGGAAAAGAAAAACGTGAAACCTGATCCTCACACCTACTCTTACCTCATTGGC +AACTCTGAGTGCTTGGAAGATGTTATCAAGTACTACGAGGAAATGAAGTCCACAGGAGTC +CAAGTTACAAAAATTGTGTACATGGCACTTATAAATGCCTATGCTGCTTGTGGAGACTTT +GAGAAAGCCAAAAAGGTAGTCCTGGACAACGGAATACCCAAAAGGAACTTAAATGAAGTC +AGAAGTGCGCTTGTTTCTGCTCTTGCATCACATGGTCGAATGTCTGATGCTCTTGAGATT +TATGATAAAGTGAAGCAAATTGGTTTCAGTTTAGAGCCAAAAGCCATCATATCTCTCATC +GAATACATGCAACCAGAA---GAACTGGGCAGACTATTCAACTTGATTGACGAACTGAGG +---GATCGATACTATTGGGTAGATGCTTGCTTCAGAGGCATTGCTCTTTGTGTTAGAAAC +AAAAAACTAAGGTCTGCTATTGACTTGATTAAGAAGCTCTTGAATAAATTGCATGATGAG +AAATTTGCAGTTGAATTTCTTCTTGATGAGGTATTCTTCCAAATTGCAGAGCTGGAGCCT +CCAGATCTGCAGATTGGTTTAGACCTGCTTACGGCGATAAAGGAAGAGCTTAAGCTTCAG +CCTTCAAGGAAGTCTCTGGATTTTCTGCTTAGTGTTTGTGTCAACACAAAGGATGTGAGG +AGTTCACATCTGATATGGGAGGAGTACCAAAAGGCAGGGTTTCCTTACAATGTTCTAAGC +TTCCTAAGGATGTATCAGGCACTCCTGGCTGCAGGTGATTTAACATCTGCTGCAAAAGTG +CTAAATAGAATGCCGAAAGATGATGTCCATGTCCGAATGCTCATCAGCTCATATCAGTCT +ACTTACATGTCTGCT------------AGA---------AATGGCAAGAAAGAGAAGATA +AAGTTGAGTTTGAAATGA +>s4 +---------------------------------------------GAAATGCCCGCCTCA +GGAGCC---------------------AAAAACCTAAGC---------------TCATTG +TTCCGCTCC------GCCGTTAAA---ACCGCCACCGCC--------------------- +---------GCTAAACCAGCTAAGAAAACTTCC---------------------CCACCG +------------------------------------GAGGACACAGCCCTGAAGCAATAC +CTCTCTCTGCTCGGAACTTCATCCCCGATCACGTCT------------------------ +---------------------------------------------------ACTTTAAAA +TCGGCACCACATAAACCTCAGCTCTCTGAGAAGCCACCGAACTCATCACTTCCTCAGTCG +AAGCGAGAGACTAAA------------CAC------TCAGTCAGTGATTTGGTCCTCCTA +AGCCCGAAACAAGGAGCCACAAAGAGCCCTGAG------------------------GAT +TCAGCAAAGGAGATATCCAGAGAGATATCGGCAATATTGTGTGGTAGCAGAGACTTGGAT +TCGTCT---------GACTTACGAGAGGCTGACACAAGGAAACCTATAGAAAAGGTTCTT +GAGCTGCCATGGTTTTCAAATTTGTGTCACAACGGCACATCATTGCGTCGAAAAGAGATA +TCACGGCGACGGAAACAAAAATGGATATTCAAGAATACCCAAAAAAATTGGTTTGGCCGG +TTGGTGACAATGTGTGCAGAAAAACTTGGTGCAGATGCTACTATTCAGGTATTTGGTAAA +TTAGGCCGAGAGACTGGTTTGAAAGAGTACAATGCACTCATAAGACTCTGCATAGAAACA +GCTAAAAAAAGCAACAATGAAGAAGTTTCGCTGCAACAGATTTACAAGGCTTATCAGCTT +TTCAAATCAATGAAGGAGCAGGGTTTTCAGATAGAAGATGAAACTTCTGGTCCATTTCTC +ACGTATCTGATTGACATGCATATGATAGAAGAGTTTTATTTTTTTCTTGAAATCATCAAA +GATGAGAATCCTAGATCATATGCAAGATTAGGTTACTATGAGATGCTGCTTTGGATAGAA +GTGGATAATGAAGACAAAGTTCATGAGCTTTTAGACCAGATTACTGCTGGGGATGGTGAA +GGGGCATCTGATTTACGA---------GAAAATTATTTGTTGGCTCTATGTGAAAGAGAC +AGGAGGAAGGAACTTTTGGAACTTTTAGAGGTTGTAGATGTAACTAAACTTTCATCG--- +GATAATGTAGTTAGAATTTTCAAGTCTTTGGGAAGGCTATCATTGCAGTCTTCTGCGGAG +AAGTTTATTTTGACATTGAAAACAAATGGTCATGGGGCTGAGAACATATCAGACTTCATC +TACTTCTATGCTACCAGCATTTCAAATTTAGCGGTTGAAGATACTGTTTTAAAGTACAAA +GGCATGCATGCAAAACTGGAGGTGTTGCCTACGTCTATCTCATATGAGAAACTTATTAAG +TTCTGTTGTCATTCACTCAAGGTGCATCTAGCTTTGGATGTAGCTGACCAAATGTGTCAA +GCAGGATTGACCATATCAACAGAAACACTTAATTACATCTCACAAGCATGTGAAGAAAGT +TGTGAGTTTAATTTGGTTCGTCGGATCTATTCAGTTCTCCATTCCCATAATTTGAAGCCA +GACAGTGAGACCTTCCGGAGTATGATAAATTTGAATGTCAGAATGAAAGATTATGATGGT +GCATATATCTTGCTGAAGGATTTGATGGAAATGAATTTAATGCCTACAGCAAGTATGTAC +AATGCCATAATGGCTGGCTATTTTCGAGAGAAAAACATTGTTGGCGGGTTGAGGGTTCTC +AACGAAATGGAAAAAGCAGATGTCAAACCAGATTCCCAGACTTACTGCTATCTCATAGGC +AACTCTGAATGTGAGGAAGATATTATTAAGTATTATGAAGAAATGATGTCTACTGGAGTC +CAAGTCACAAAGCATGTTTTCATGGCACTTGTAAATGCATATGCCACATGTGGCGAGTTT +GACAAGGCGAAACAGGTAGTATTAGACAAAGAAGTACCTGTAAAGAACTTAAATGAAATC +AAAAGTGCGCTTGTCTCTGCTCTTGCATGTCATGGGCAAATGTCTGATGCCCTTGCCATT +TATGACGAAATCAAACAGGGTGGTTGCAGTTTAGATCCGAAGGCTATTATATCTCTCATT +GAACACATGCAATCAGAAGGAGAATTGTCTAGATTACTTGAGCTGCTTGAGGAATTAAGT +---TGTCCAGGCTATTGGATTGATGGTTGCTTCAGAGTCATCTTATATTGTGTTAGAAAC +AAGCATTTAAGGCCTGCCATCGATTTGCTCAGGAAAATCTGGAATAAATTGCACGATGAT +GAAGTGGCAGGCGAAGTTCTTTTTGATGAGGTATTTTCCCAAATTGCGGAGATGGAACCC +CCAGATTTGCAGATTGGATTGGAATTGCTTGAAGCCATAAAGGAAGAGCTTAAACTTCGT +CCTTCACGGAAATGTCTGGATTTTCTTCTTAATGCTTGTGTCAATGCAAAGGATTCAAAG +AGTTCTCTTTTGATTTGGAAGGAATATGAAAAAGCTGGCCTGCCGCACAATGTTTTAAGC +TTCTTAAGGATGTATCAGGCCCTTTTGGCTTCTGGGGATTCAAAATCGGCTTCAAATTTA +CTGAACCGAATACCGAAAGAGGATTCTCATGTTCGTTCCGTCATCAGCGCATGCCAATCG +ACCTAC------GGT------------AAG---------AACCGTAAGAACGAGAAGAAA +AAGAAGAAT---AGTTGA +>s5 +------TCGTTAGTTCTTCTAGTTCTAGGGTTTCAAAATTATCGAAATTTCTTTTGGCAT +------------------------------TTTCTCTCT---------------TCATTT +TTTTTTTCCTTTTTGGTTCCCAAACCTCCTCTGACTCTC--------------------- +---------CCTCTTCCCCAATTTCTCATTTCTCGTTTTCCCTCCCTTCCTCCTCCTCCT +CCTCCTAGT---------------ACTACGATTGCTGATGACGCTGCCCTAAAGCAACAT +GTCTCCTTGCTG---------GTTGCTTCCTCTTCAACTCCCACTCCCGAAGCGACGGTG +ATGACGAAGACTGCGGAGTCTGGTGTCGGTGAGGCGAATAAACTGAAGGGTTCT------ +------------------------------------------------------------ +---------AAAAGGGAGCGAGTTGTTAACGAGGACTCCATTAGCTGTTTGCTCCTCCGA +AGCTTGAACCCAAGCACCGAGACGAATTCA------------------------------ +------------------------------------------------------------ +---------------------------------AAAGAGAGATCCGTGGAGAAGCAGCTT +GATCTACCATGGTTATCTAATTTGTTAAATATTGATGCCTTTCACCGTCGCAAAGAACTA +TCTCGTGAGCGAAAGCAGAAGTGGATATATAAGAATACACAAAATGTTCGGTTTTCATGG +TTAGTCAGAAAATGTGCCAAGAAGCTTGGAGTAGATGCTGCTATCCAGGTTTTTGGTAAA +TTACGCCCGGGAACTGGCAGAAAGGAGTATAACACACTTATAAGGCTATATATAGATACT +GCTAGGAAAGCTGAAGATGAAGAGGTTGCTTTGGATCAGAGTTACAGGGCTTATCAGCTC +TTCAAATTGATGAAGGAGGAAGGTTTCAATATAGAAGAGGAAACTTATGGTCCATTCCTC +ATTTATCTCATTGACATGCATATGACAGATGAATTCTATTTTTTTCTTCCTCTTATCAAA +GATGAGAATGCAAGTTCAATGGCAATGTTGGGGTACTATGAAATGTTGCTTTTGATAGAA +GTGGGTGATGAAGACAAAATTCATGAGCTCATCTCCAAACTCACCCATGAGAAATGTGAA +CATGACCCCAATCTACAAGCTCTTGCAGAAAATTATTTGTTAGCACTGGGTGAACGAGAC +AGGAAGAAGGAATTCTTACAACTCTTGCAGGTTATAGACATTACTAACCTTCCATTA--- +GACAATATTGGTAGGATTTTTAAATCCTTGGGCAGGCTGTCATTGCAATCTTTTGCTGAG +GATCTTATTTTGGCATTCAAAACAAATGATCAAGAGTTTGAAATCCTGTCAGACTTCATC +TATTTGTACTCTACCAGTGTGACAAATTTATCGGTTGAGGATGCCATTTTGAAGTACAAG +GACATGCATGCGAAGCTGGAGGTTCTGCCTTCATCCAAATCATATGAAGAGCTTATCAAG +TTCTGCTGTGGTTCACTGAAGGTGCATCTAGCTTTGGATGTGGCTGATCAGTTGTGTCAA +GCTGGATTGTCCTTATCAACAGAAACACTTAATACAATATCACGTGCATGTGAAGAAAGC +AGTGAGTTTTATCTGGTTCGCCAGATCTATTCAATTATCTGTTGTCATAACTTGAGCCCA +AATTCTGAAACATTCAGGAGCATGATAAATTCAAGTGTTAGAATGAAAGATTTTGATGGA +GCCTATGACATGCTGAAGGTGTCGGAAAAAAAGAACTTAATGCCTAGTGCAAGTATGTAC +AATGCTATAATGGGTGGCTACTTCAGAGAGGGAAACACTGTTTCCGGATTCGAGGTTCTC +AAACAAATGGAGAAGGCAAATGTGAAGCCAGATTGCATTACTTACAGCTATCTCATTGGA +AACTCGAAATGTGTGGATGATATCATTAAGTATTTTGAAGAAATGAAGACATCAAGTGTG +ACCCTGACGAAGCATGTTTTTATGGCAATGATAAATGCATATGTCACTTGTGGAGAGCTT +GAGAAGGCAAAACAGGTAGTCTTTGACAAAGCAGTTCCTGAAAAGAATGCAAATGAAATC +AGAAGTGCCCTTTTATCTGCTCTTGCATCAAATGGGAAAATTTCTGATGCTCTTGACATA +TATGAAGAAATCAAGCAGAGTGGTTCATCTGTGGAGCCAAAAGCCTTGATCTCTCTCTTG +GAACACATTCAAGTAGAGGGAGAACTGCCTAGATTACTTCAGTTCCTTGAGGAATTGAGT +---GACCCAGATTATTGGGCTGATGGTTGCTTCAGAGTCATATCATATTGCATCAGACAC +AAAGATATACAGTCTGCTGTTGATTTGCTGAAGAAACTCAAGGATGCATTTGATGATGAT +GAATTGGCAGGGGAAGTTCTTTTTGATGGGGTCTTTTGTCAAATTGCGGAGATGGAGCCT +TCAGGTTTACAAATTGGGCTTGAATTACTTCAATCAATAAAGGAAGACTTGAAGCTTCTT +CCTTCTAGGAAATGCCTGGACTTTTTACTGAGTGCTTGTGTCAAGGCAAAGGATGTAAGG +AGTTCTCTTATGATCTGGAAGGAATATCAAATGGCAGGCTTACCTTATAATCTTCTAACC +TTCTTGAGGATGTATCAGGCCCTTTTGACATCTGGGGATTTCAAATCTGCAGCAAAGATG +CAGGATAAATTACGGAAAAATGAGCACCATATTCATTCTATCGTTGTTGCTTGCGAAGAT +GCTTTC------AGCAAGCCTACTGAAAAA---------AATAAGGACACGGCTAGGAAA +AAGAAGAAA---TTTTAG +>s6 +CGATCTCCCCCTCCTCTGCCCCCATTCACCTACTCATCCCGAAATGAAATGCCAGCCTCT +------------------------------CACCTAAGC---------------TCACTC +TTCCGTTCC------ACCGTCAAATCCTCCGCCTCCGCC--------------------- +---------GCCGCCGCCGCCAGACTCTCTCAAAAACTCCCCTCTCCTCCGCCTCCTCCT +CCTCCTCCTATACCTGTTACTGTTGCGGCGATTAAAGAGGACGGAGCCCTAGAACAGTGC +AGCACCTTGCTC---------GAGGCTTCTTCGAAA------------------------ +---------------------------------------------------TCG------ +------------------------------------------------------------ +---------AAGCGA------------CGTGAGGATTTTGTTACTGATTTGGTGCTCCGT +AGCTTGAGCCCAGGGTTCGAGTCTATCTCTGAA------------------------GAT +TCAGCAAACCAAATACCAAATGAGCTATCGTCAATACTTTGTGGAACTAAAGATTTAGAG +TCCTCCCATTCTTCTGACATCCTAAAGGTTGACAATGAGAAATCTATGGAACAGCTACTT +AATCTACCATGGTTTTCTAGTTTGTTCCACACTGGCACCTCACTACGTCGCAAAAAACTC +TTTCGGGAACGGAAGCAGAAGTGGATCTTTAAGAATACACAAAAAGCTCGGTTTTCCTGC +TTGGTCACTAGGTGTGCACAGAAGCTGGGACCAGATGCTACCATCCAGGTATTTGGCAAA +TTAGGCAGAGAAACTGGAGTGAAAGAGTACAATGCTCTTATAAAGCTATGCATAGAAACT +GGTAGGAAAACCGACGATGAAGAGGTTGCAGTGGAGCAGTGTTACAAGGCTTATCAGCTC +TTCACTTGGATGAAAGAAGAAGGTTTTCAGATAGAGGAGCAAACCTATGGACCATTTCTC +ATGTATCTTATTGACATGCATTTGAAGGAAGAGTTCTACTTTTTTCTTCCGTTAATCAAA +GAT------ACAAGTTCATCGGCGAGGTTTGGCTACTATGAGATGCTGCTTTTTGTTGAA +ATTGACGATGAAGAAAAAATTCATGAGCTTATTAGTCAAATTACCCAGGAAAAATATGAA +AAGGACCTCAATCTACAAGGTCTTGCAAAAAATTATTTGTTGGCACTATGTGAAAGGGAT +AGGAAGAATGAGCTCTTGGACCTCTTGGAAGTTGTAGACATTACGAAACTTCCACCG--- +GAAAGTATTGGTAGCATTTTGAAATCCCTGGGGAGGCTCTCATTGCAGTCCTTTGCAGAG +AAGTTCATTCTGGCATCCAAAGAAGATGGTAAAGGGTCCGAATGTATATCAGACTTCATC +TGTTTGTTCACTACCAGCATGACAAACTTTGTGGTTGAAGATATCATTCTAAAGTACAAG +GACATGCACACGAAGCTGGAGGTTTTGCCTTCTTCTGAATCATATGAGAAGCTTATCAAA +TTCTGCTGTGGTTCACACAAGGTGCACCTTGCTTTGGATGTGGTTGATGAGATGTGTGAA +GCCGGGTTTTCTTTGTCAACAGATACGCTTAACTCTGTACTGCATGCGTGTGAAGAAAGC +AGTGAGTTTTGTCTGGTTCGCCGGATATATTCAGCTCTCTGTTATCACAAGTTGATGCCG +AATAGTGAAACATTCAGAAGCATGATAAACTTATTCGTTAGAATGAAAGATTTTAATAGA +GCATATGACATGCTGACGGAGTTGGAGAAAGTGAACTTAATGCCTACGACTAGTATGTAC +AACACTATAATGGGTGGCTACTTCAGAGAGGGAAACACTGTCAACGGTTTTAAGGTTTTG +AAAGAAATGGAGAAGGCCGATGTCAAGCCAGATTGCCAGACTTATGGCTATCTTATTAAC +AACTCAGAACGCGAGGAAGATATCATCAAGTATTATGATGAAATGAAGTCGTCAGGAGTG +ACCTTGACAAAGCATGTTTTCATGGCACTGATAAATGCATATGCCAATCGTGGAGAATTT +GAGAAGGCAAAGCAGGTAGTTTTTGACAAAGGAGTACCTCTGAAGAACATAAATGAAATT +AGAAGTGCCCTTGTGTCTGCTCTTGCATCACATGGTAAAATATCTGATGCCTTTGACGTA +TATGAACAAATCAGGCAAAGTGGTTCAACTGTAGAGCCAAAGGCCTTGGTCTCTCTCGTG +GAATTCACTGAATCAGAAGGACAACTGCCTAGATTACTTCAGATTATGGAGGAACTGACT +ACTGATCTAGTTTATTGGATTGATGGTTGTTGCAGAGTCATTTTGTATTGCATAAGACAC +AAAGATATAAGGTCTGCGGTTGATTTGTTAAAGAAGCTCAAGGACGCGTTTAATGATGAT +GAACTGGCTGGTGAAGTTCTTTTTGATGAGGTCTTTTCTCAAGTTGCAGAGATGGAGCCA +TCAGGTTTACGATTGGGCCTTGACTTGCTTCAAACAATCAAGAAAGAACTTAAAATTCGT +CCTTCTAGGAAATGCCTAGATTTTTTACTTAGTGCTTGTGCTGACGCAAAGGATGCAAAG +AGTGCCCTCTTGATATGGAAGGAATACGAAATGGCTGGCCTACCTTACAATCTTGTTACC +TCCTTAAAGATGTATCAGGCCCTTATGGCATCTAGAGACTTTGAGTCGGCTGCTAAGGTG +CTGACTAGAATACCAGTAGATGACTCCCATGTCCGATCTATCCTCTTTGCTTGTGAAGCT +ACTTAT------GGTATTCCTACTAAAAAAGGTACCAGCAACAAGATGATTAGGACACTG +AAGATGAAA---GTTTAG diff --git a/example_files/pxaa2cdn_example/ND6_aa.fa b/example_files/pxaa2cdn_example/ND6_aa.fa new file mode 100644 index 0000000..122875d --- /dev/null +++ b/example_files/pxaa2cdn_example/ND6_aa.fa @@ -0,0 +1,140 @@ +>Branta_canadensis +--MAYFMFFLGICFAVGVLGVASN-----PSPYYGVVGLVLASVAGCGWLLGLGVSFLALVLFMVYLGGMLVVFVYSVALAA--EPFPEAWGDWR---------VIGCGVA-FVVVVFGGLVFG--G-FMGSWKFEVATVNNVG--------------MFVTRSDFCGVSMFYSH--GAGMFLVAG--WGLLLTLFVVLELVRGLSRGAIRAV +>Numida_meleagris +--MTYFMIFLGVSFMLGTLAVASN-----PSPYYGVVGLVLASVVGCGWLMSLGVSFISLALFMIYLGGMLVVFVYSVSLAA--DPYPEAWGSWR---------VVGYGLG-FVLVVCAGVVLG--G-LVEFWKVGAVTVDGGG--------------MSFMRLDFSGVAVFYSW--GVGLFLVAG--WGLLLVLFVVLELVRGLSRGAIRAV +>Aythya_americana +--MTYFVFFLGVCFVVGVLGVASN-----PSPYYGVVGLVLASVAGCGWLLSLGVSFVALVLFMVYLGGMLVVFVYSVALAA--EPFPEAWGDWR---------VAGYAAA-LVAVVLAGLVLG--G-FVGSWGFGVVTVDSVG--------------MFTVRLDFSGVAMLYSR--GVGMFLVAG--WGLLLTLFVVLELVRGLSRGAIRAV +>Alectura_lathami +--MTYFVLFLGVSFMLGSLAVASN-----PSPYYGVVGLVLGSVAGCGWLLSLGGSFVSLVLFMVYLGGMLVVFVYSVALAA--DPFPGAWGDWR---------VVGYGVG-FVLVVFVGVVWG--G-FVDFWGVEVNTVDGGG--------------STLMRLDFSGVAVFYSY--GVGLFLVAG--WGLLLTLFVVLELVRGLSRGAIRAV +>Caiman_crocodilus +---MEFTLFLGCLVLMCAVMVGAN-----SGVHFAVLSLVFMAMLGSGLVVIEGGSFMPLVVLLVCLGGLLVVFAFCVGFTD--DPFG---GVGVS-----KEFVFFCLVG---LVVVVGCVCGYLRDCWVVGVSGMVGVEVVG---------------SGAANELLGVGLMYSS--GWGFVLVCS--WALLVALFVITGIVRGHCLGSLRSF +>Alligator_sinensis +---MEITLFFCCFMLVCAMMVAAS-----SMIHFAVVSLLFVAVFGSGLVVVEGGSFMPLVVLLIYLGGLLVVFAFCVGFTD--DPFMGFWGVGVS-----KGAVFLYWVG---LLIGICCAWGYLW-GGMWISVGEPWSEVV-------------------VGESLGVSEMYCN--GWVFVVVCG--WALLIVLFVITGLIRGHRRGAFRSF +>Alligator_mississippiensis +---MGFTLFLCCLMLACAMMVAAS-----SMIHFAVVSLLFVVVFGSGLLIIEGGSFMPLVVLLVYLGGLLVVFAFCVGFTD--DPFGGFWGVGVS-----KWVVFFWWAG---FFRGVYSRYWRLW-CWGKTSAGEFWGEVV-------------------SSELLGVSQMYSD--GWAFIVVCG--WALLVVLFVITGFVRGYRQGAFRSF +>Chrysemys_picta +--MMYFMFLFGFCFVFWMVGVSCN-----PSPYYGVLSLVLGAASGCGVLVGMGGSFMSLVLFLIYLGGMLVVFAYSSALVV--DPYPAGWGGLG---------GLVYVVG-FVLLVLGLVVMGS-F-LCGVEGFGEVTADGVG--------------LCVVRLDFGGVSWFYYY--GSVMFLISG--WGLLLTLFVVLEMVRGLSCGTLHSI +>Pelomedusa_subrufa +---MYVSMLFGFSYVFWLIGVSSN-----ISVYYGVVSLVCTAGTGCVVLAWKGGSFLALVLFLIYLGGMLVIFAYSITLVM--EPFPEVMGDWV---------GVMHAGK-YVVLAVVFVLVGW-G-WWGVGECGDGVVDAGG--------------LSIVRVDSSGLSLLYAI--GGGALMMAM--FGLFLTFFIVLVLVQGLFRVACPTI +>Chelonia_mydas +--MMYFAFLFGFCFVFWMVGVSCN-----PSPYYGVLSLVLGAAFGCGLLVSMGGSFVSVVLFLIYLGGMLVIFAYSSALVE--EPYPVAWGSQG---------GVVYVVS-YVLVVLVYGMMCY-W-LWSMEGYGSVTVDAGG--------------LFVVRLDFSGVAWFYYF--GSWLFLIAG--WGLLLTLFVVMELVRGLSRGVIRPI +>Dogania_subplana +--MVFFMFLFEVCFIFWVVGVASG-----PSPYYGVVGLVFGAVFGSLMLVGLGGSFISLVLFLIYLGGMLVVFAYSVALTG--DPYPSAWRSYG---------DLFCMVG-YVLLVIGAAMFCF-S-VWSLEGYGDVVVDADG--------------LFSVRVDYVGVSWFYYY--GCVMFFVVG--WGLLLTLFVVLDLVRGLVCGAIRSI +>Chinemys_reevesi +--MMYFMFLFGFSL-YWMMGVSCN-----PSSLLWGVSLIFGALIWSGVLLY--GYWLFLLIHLRWKSLILLLGEVKVEWMA--EPYPVAWGSQG---------GVVYVVS-YVLVVLVYGMMCY-W-LWSMEGYGSVTVDAGG--------------LFVVRLDFSGVAGFYGVENGLLLMLVEGYCWRCLLC------------------- +>Pelodiscus_sinensis +--MVFFMFLFEVCFVFWIISVASG-----PSPYYGVVGLVFGAVFGCLMLVGVGGSFISLVLFLIYLGGMLVVFAYSVALTG--DPYPSAWRGYG---------DLFCMVG-YVLFVVGAVMYCF-D-KWSLEGYGDVVMDASG--------------LFSVRMDYIGVSWFYSY--GCVMFLIAG--WGLLLTLFVVLDLVRGLAWGTIRSI +>Gallus_varius +--MTYFVIFLGICFMLGALAVASN-----PSPYYGVVGLVVASVMGCGWLVSLGVSFVSLALFLVYLGGMLVVFVYSVSLAA--DPYPEAWGSWR---------VVGYGLG-FVLVVWMGVVLG--G-FVDFWKVGVVTVDGAG--------------MSFGRLDFSGVAVFYSC--GVGLFLVAG--WGLLLALFVVLELVRGLSRGAIRAV +>Pterodroma_brevirostris +--MAYFVLFLGLCFVLGGLAVASN-----PSPYYGVVGLVMGSVVGCGWLLSLGVSFVSLVLFMVYLGGMLVVFVYSVSLAA--DPFPEAWGDWR---------VVGYGVG-FSLVVMVGVVIG--G-FVEWWKLGVVTVDGSG--------------PFLVRLDFSGVAMFYSS--GVGMFLMAG--WGLLLTLFVVLELVRGLSRGAIRAV +>Diomedea_melanophris +--MAYFVLFLGLCFVLGGLAVASN-----PSPYYGVVGLVLASVVGCGWLLSLGVSFVSLVLFMVYLGGMLVVFVYSVSLAA--DPYPEAWGSWG---------VVGYGMG-FILVLAVGVVVGGWG-LVECWKLGVVTVDSGG--------------VFSVRLDFSGVAMFYSY--GVGMFLVAG--WGLLLTLFVVLELVRGLSCGAIRAV +>Gavia_stellata +--MTYFVLLLSVCFILGGLAVASN-----PSPYYGVVGLVLASVVGCGWLLSLGVSFVSLVLFMVYLGGMLVVFVYSVSLAA--DPFPEAWGDWR---------VMGYGAG-FALVLTAGVVVG--D-FVEWWKFGAVTVDSGG--------------MFSVRLDFSGVAMFYSY--GVGMFLVAG--WGLLLTLFVVLELVRGLSCGALRAV +>Larus_dominicanus +--MTYFVLFLGLCFVLGGLAVASN-----PSPYYGVVGLVLASVAGCGWLLSLGVSFVSLVLFMVYLGGMLVVFVYSVSLAA--DPFPEAWGDWR---------VVGYGVG-FVLVLVVGGVVG--G-LVEFWHPGVITVDSGG--------------MFSVRLDFSGVAMFYSC--GVGMFLVAG--WGLLLTLFVVLELVRGLSRGAIRAV +>Ninox_novaeseelandiae +--MTYFVLFGGVWFVLGGLAVASN-----PSPHYGVVGLMVGSISGCVWLLSLGVSFVSLVLFMVYLGGMLVVFVYSVAXAA--DPFPEAWGDWR---------AVGYGVG-LVSALVGVAGMG--G-VMGWWGLVGGTVDGGG--------------TSLVRLDFSGVSLFYSC--GVGMFLVAG--WGLLLTLFVVLELVRGLSRGAIRAV +>Strigops_habroptilus +--MAYFVLFLGIGFVLAALAVASN-----PSPYYGVVGLVFGSIVGCGWLVSLGASFVSLVLFMVYLGGMLVVFVYSVSLAA--DPFPQAWGDRH---------VMGYVVG-LGLVVGLGLALG--G-L--EIKFGVETIDSVG--------------LFFVRLDFSGVAMLYSC--GVGMFLVAG--WGLLLTLFVVLELVRGLSRGAIRAV +>Eudyptula_minor +--MTYLVLFLGVCFVLGGLAVASN-----PSPYYGVIGLVLASVMGCGWLLSLGVSFVSLVLFMVYLGGMLVVFVYSVALAA--DPFPEGWGEWP---------VVVYSVG-LILVLGVGLGVGE----FGGWKFGLSTVDSEG--------------VMSVRLDFSGVALFYSY--GAGMFLVAG--WGLLLTLFVVLELVRGLSRGAIRAV +>Anomalopteryx_didiformis +--MTYFVLFLGVCFILGALAVASN-----PSPYYGVLGLVVGSVMGCGWLLSLGASFISLVLFLVYLGGMLVVFVYSVSLAA--DPFPEAWGDWR---------VWGFGAS-LVLVVFGGLVVM--G-LVGVTVGGVGTVDCGG--------------MVSVRTDFSGVAMFYSW--GGGMLLVAG--WGLLLTLFVVLELVRGVSRGAIRAV +>Apteryx_haastii +--MSYLVFFLGLCFVLGVLAVASN-----PSPYYGILGLVVGSVAGCGCLLSLGMSFVSLVLLLVYLGGMLVVFVYSVSLAA--DPFPEAWGNWR---------VWGYGMG-FLLVIFVGVVVG--G-LMELEMGGVRTVDCGG--------------PVSVRMDFSGVAMFYSW--GVGMFLVAG--WGLLLTLFVVLELVRGLSRGTIRAV +>Arenaria_interpres +--MTYFVLLLGLCFVLGGLAVASN-----PSPYYGVVGLVLASVAGCGWLLSLGVSFVSLVLFMVYLGGMISVFVSSVSLAA--DPFPEAWGDWR---------VVGYGVG-FMLVVISGMVVG--G-IGECWKVGVVTVDSGG--------------MFSVRLDFSGVAMFYSY--GVGMFLVAG--WGLLLTLFVVLELVRGLSRGAIRAV +>Aythya_americana +--MTYFVFFLGVCFVVGVLGVASN-----PSPYYGVVGLVLASVAGCGWLLSLGVSFVALVLFMVYLGGMLVVFVYSVALAA--EPFPEAWGDWR---------VAGYAAA-LVAVVLAGLVLG--G-FVGSWGFGVVTVDSVG--------------MFTVRLDFSGVAMLYSR--GVGMFLVAG--WGLLLTLFVVLELVRGLSRGAIRAV +>Buteo_buteo +--MAYFVLLLGMGFVLGGLAVASN-----PSPYYGVVGLVLGSVVGCGWLVSLGVPFVALVLFMVYLGGMLVVFVYSVCLAA--DPFPETWGDWR---------VLGYGAG-MVLVLVVGVVVG--G--VECWKIGVVTVDNGG--------------TFVDRLDFSGVAMFYSW--GAGMFLAAG--WGLLLTLFVVLELVRGLSCGAIRAV +>Casuarius_casuarius +--MTYFIFFLGLCFILGALAVASN-----PSPYYGVLGLVVGSVVGCGWLLSLGVSFISLVLFLVYLGGMLVVFVYSVSLAA--DPFPETWGDWR---------VLGYGVG-LALVVFVGVVMG--D-FMGVGVQGVGTVDCGG--------------AVSVRMDFSGVAMFYSW--GAGMFLVAG--WGLLLTLFVVLELVRGLSRGAIRAV +>Ciconia_boyciana +--MAYFMFLLGGCFALGALAVASN-----PSPYYGVVGLVVASVVGCGWLLSLGASFVSLVLFMVYLGGMLVVFVYSVALAA--DPFPEAWGSRQ---------VVMYGVG-LILVLMVGGAVG--G-FAECWKVGVVTVDSGG--------------LSFARLDFSGVAMFYSE--GAGMFLMGG--WGLLLTLFVVLEVVRGLSRGTIRAV +>C_ciconia +--MAYFMLLLGGCFALGALAVASN-----PSPYYGVVGLVVASVVGCGWLLSLGASFVSLVLFMVYLGGMLVVFVYSVSLAA--DPFPEAWGSRQ---------VVMYGVG-LILVLMVGGAVG--G-FAECWKLGVVTVDGEG--------------LSFARLDFSGVAMFYSE--GAGMFLMGG--WGLLLTLFVVLEVVRGLSRGTIRAV +>Corvus_frugilegus +--MMNFVLFMTLCFVLGGLAVASN-----PSPYYGVVGLVVASIAGCGWLLSMGVSFVSLVLVMVYLGGMLVVFVYSVSLAA--DPYPESWGDWR---------VVGYGVG-MGLVVVIVGVVM--G-AFSEVVMGGDTVNNGG--------------LSWTRTDFSGVAMFYSS--GSGLLLIAG--WGLLLTLFVVLELVRGLSRGAIRAV +>Coturnix_japonica +--MTYFVIFLGVCFMLGTLAVASN-----PSPYYGVVGLVLASVVGCGWLVNLGVSFVSLVLFMIYLGGMLVVFVYSVSLAA--DPYPEAWGSWR---------VMGYGLG-FVLVVCMGMGLG--G-FVDFWKIGVTTVDSGG--------------MSFVRLDFGGVAAFYSY--GVGLFLVAG--WGLLLVLFVVLELVRGLSRGAIRAV +>Dinornis_giganteus +--MTYFVLFLGVCFILGALAVASN-----PSPYYGVLGLVVGSVMGCGWLLSLGASFISLVLFLVYLGGMLVVFVYSVSLAA--DPFPETWGDWR---------VLGFGAG-LVLVVFGGLMVA--G-SVGVMVGGVGTVDCGG--------------MVSVRTDFSGVAVLYSW--GGGMLLVAG--WGLLLTLFVVLELVRGVSRGAIRAV +>Dromaius_novaehollandiae +--MTYFIFFLGLCFILGALAVASN-----PSPYYGVLGLVLGSVVGCGWLLSLGVSFISLVLFLVYLGGMLVVFVYSVSLAA--DPFPETWGDWR---------VLGYGVG-LVLVVFVGMVVG--N-FVGVGVQGVNTVDCGG--------------AVSIRMDFSGVAMFYSL--GAGMFLVAG--WGLLLTLFVVLELVRGLSRGAIRAV +>Emeus_crassus +--MTYFVLFLGVCFILGALAVASN-----PSPYYGVLGLVVGSVVGCGWLLSLGASFISLVLFLVYLGGMLVVFVYSVSLAA--DPFPEAWGDWR---------VLGFGAS-LVLVVFGGLVVM--G-SVGVTVGGVGTVDCGG--------------MVSVRTDFSGVAMLYSW--GGGMLLVAG--WGLLLTLFVVLELVRGVSRGAIRAV +>Eudromia_elegans +--MTYFVFFLGVGLVMGALAVACN-----PSPYYGVLGLVLGSVMGCGWLVSLGVSFVSLVLFLVYLGGMLVVFVYSVSLAA--DPYPEAWGDWR---------VVQYGVG-FMMIVLVGVVLG--G-FVEEGVVVGGTVDSVG--------------MMSVRMDFSGVAMFYFW--GAGLFMVVG--WGLLLSLFVVLELVRGVSRGAIRAV +>Falco_peregrinus +MVMTYFVFFLGVCFVFGALAVASN-----PSPYYGVVGLVLGSVVGCGWLMSLGVSFISLVLFMVYLGGMLVVFVYSVALAA--DPFPEAWGNWR---------VVGCGVG-LILLLFVGAVIG--G-SVGYLSPGVGTVDSGG--------------VVSVRLDSSGVAMFYFY--GVGMFFIAG--WGLLLTLFVVLELVRGLSRGAIRAV +>Gallus_gallus +--MTYFVIFLGICFMLGVLAVASN-----PSPYYGVVGLVVASVMGCGWLVSLGVSFVSLALFLVYLGGMLVVFVYSVSLAA--DPYPEAWGDWR---------VVGYGLG-FVLVVWMGVVLG--G-LVDFWKVGVVTVDGGG--------------VSFARLDFSGVAVFYSC--GVGLFLVAG--WGLLLALFVVLELVRGLSRGAIRAV +>Haematopus_ater +--MTYFVFFLGVCFVLGGLAVASN-----PSPYYGVVGLVLASVAGCGWLLSLGISFVSLVLFMVYLGGMLVVFVYSVSLAA--DPFPEAWGSWG---------VVGYGFG-LILVLVVGVVVG--G-LVGCWKFGIVTVDGGG--------------MFSVRSDFSGVAMFYSC--GVGMFLVAG--WGLLLTLFVVLELVRGLSRGAIRAV +>Pterocnemia_pennata +-MTSYFVFFMGLSFVLGALAVASN-----PSPYYGLLGLVVGSLVGCGWLLSLGVSFISLVLFLVYLGGMLVVFVYSVSLAA--DPFPEAWGDWR---------VLGYSGG-LLLVMLVGVVVG--G-GMGSELWGISTVDSEG--------------AVLVRMDFSGVAVFYSW--GAGMFLIAG--WGLLLTLFVVLELVRGLSRGAIRAV +>Rhea_americana +-MTSYFVFFMGVSFILGALAVASN-----PSPYYGLLGLVVGSLVGCGWLLSLGVSFISLVLFLVYLGGMLVVFVYSVSLAA--DPFPEAWGDWR---------VLGYSGG-LLLVVLVGVVVG--G-GMGSELWGVNTVDSEG--------------AVLVRMDFSGVAVFYSW--GAGLFLIAG--WGLLLTLFVVLELVRGLSRGAIRAV +>Smithornis_sharpei +--MMYFLLLLGMCFVLGGLAVASN-----PSPYYGVVGLVMASVVGCGWLMSLGLSFVSLVLFLVYLGGMLVVFVYSVSLAA--DPFPEAWGDWR---------VIGYGLG-LVLVLGVGVVVG--G-LLGEWQLGVETVDWGG--------------VNAVRLDFGGVAMLYSW--GVGQFMVAG--WGLLLTLFVVLELVRGLSRGTIRAV +>Struthio_camelus +--MTYFVMFLGFCFILGAVAVASN-----PSPYYGVLGLVVGSVVGCGWLLSLGVSFISLALFLVYLGGMLVVFVYSVSLAA--DPYPQAWGSWQ---------VVIYGVG-LVLVVLVGIVVG--D-FVGVWNLWVGTVDYGG--------------LGAVRLDFSGVALFYSW--GAGLFLVAG--WGLLLTLFVVLELVRGLSRGAIRAV +>Tinamus_major +--MMYFVSFLGVCFVLGALAVASN-----PSPQYGVMGLVMGSVVGCGWLLSLGVSFVSLVLFLVYLGGMLVVFVYCVSLAA--EPYVEAWGDWR---------VLGYGMG-FMVVVLMGGVVW--D-LVGSGGWWVGTVDCVG--------------GGLVRVDFSGVAMFYSW--GAGMFMVAG--WGLFLTLFVVLELVRGLSCGAVRAV +>Vidua_chalybeata +--MMEFVLFLGLLFALGGLAVASN-----PSPYYGVVGLVVAAIAGGGWLVSLGVSFVSLMLVMVYLGGMLVVFVYSVSLAA--DPYPETWTDWG---------VVGYGFG-MGLVVMVGLVVS--G-VFGLLADVG-TVNGAG--------------LLSVRVDFSGAAVLYSE--GAGFLLIGG--WGLLLTLFVVLELVRGLSRGAIRAV +>A_mississippiensis +---MGFTLFLCCLMLACAMMVAAS-----SMIHFAVVSLLFVVVFGSGLLIIEGGSFMPLVVLLVYLGGLLVVFAFCVGFTD--DPFGGFWGVGVS-----KWVVFFWWAG---FFRGVYSRYWRLW-CWGKTSAGEFWGEVV-------------------SSELLGVSQMYSD--GWAFIVVCG--WALLVVLFVITGFVRGYRQGAFRSF +>Caiman_crocodilus +---MEFTLFLGCLVLMCAVMVGAN-----SGVHFAVLSLVFMAMLGSGLVVIEGGSFMPLVVLLVCLGGLLVVFAFCVGFTD--DPFG---GVGVS-----KEFVFFCLVG---LVVVVGCVCGYLRDCWVVGVSGMVGVEVVG---------------SGAANELLGVGLMYSS--GWGFVLVCS--WALLVALFVITGIVRGHCLGSLRSF +>Alligator_sinensis +---MEITLFFCCFMLVCAMMVAAS-----SMIHFAVVSLLFVAVFGSGLVVVEGGSFMPLVVLLIYLGGLLVVFAFCVGFTD--DPFMGFWGVGVS-----KGAVFLYWVG---LLIGICCAWGYLW-GGMWISVGEPWSEVV-------------------VGESLGVSEMYCN--GWVFVVVCG--WALLIVLFVITGLIRGHRRGAFRSF +>Sphenodon_punctatus +--MTYAIFLFGLCFVFGLLLVASN-----PSPYYGVLGLLMASAVGGGFLVGVGSSFLSVILFLIYSGGMLVVFAYSVALAA--DFYPEAWGSRS---------VAVNLVVFLSLLVFVGSGFS--W-GLSKKGVGEETVDFGG--------------ISLIRGDFGGVAILYDF--GCSVLVVSG--WVLLVALFVVLELTRGQSRGSLRAV +>Pogona_vitticepes +---MHLVFFIALGFLLGVIGVASN-----PSPCFGAGALVIASGFGCGVLAEFGYSFIALILFLVYLGGMLVVFAYSIALAS--DVYPQAWGNYV---------VGLSSVG-YFLVVMMVVWMGG-G-YLDFGEMGGGLV-------------------FMLDSGYGGISMLYSV--GGFCLFFLG--VGLLITLFVVLELARAGVSIARKY- +>Sceloporus_occidentalis +--MVYYMFLMFFCLIVGLAAVASN-----PSPYFGAAGLVISAGVGCAVLVGFGSSFVSLVLFLIYLGGMLVVFAYSVALSS--DPFPETWGSWS---------VGVYLFGYLVSVVVLW-LVV--G-VGDVSEYGMVGVDAVG--------------LSVLRGDFCGVSLLYSI--GGGGLLVCG--WGLLLTLFVVLELTRGLARGGLRVV +>Iguana_iguana +--MAYFLFILFFCLVGGLMAVASN-----PSPYFGAAGLVVSAAVGCGVLVGFGGSFVSLVLFLIYLGGMLVVFAYSVALAS--EPYPETWGNRS---------VGLYLVGYLFLIFVLWGLLG--G-EWGFSGYGLGGVDAVG--------------ISVSRSDFGGVSLLYSV--GGGALLICG--WGLLLTLFVVLELTRGLSRGSLRVV +>Eumeces_egregius +--MVYLIFLMSFCLLGGLVAVASN-----PSPYYGAAGLVVSAAVGCGVLVWFGNSFVSLVLFLIYLGGMLVVFAYSVALAA--DPYPETWGNWS---------VGLYFVGYVLLVVVLGAVFG--G-GALDVGIGVEGVDSVG--------------LFSVRADFSGVSLLYSW--GGFCLLVSG--WGLLLALFVALELSRGLVRGGLRVV +>Bipes_canaliculatus +--MTYVVYFLGAALLLSVVGVAIN-----PAPHFAAGALALAALFGGAILAWCGGLFLPVVLLLIYLGGMLVVFAYAIALVP--GETRGAYGHWRA-----WAVVVGAVFIMLCLVELAF---------------G--VLDWGG--CWVGSYGADGV-----KVDLCGVGGLYTF--GMWWLLLCG--LCLFVCLFVVLGLSFGGSRGGVRPF +>Diplometopon_zarudnyi +--MMYLVYLLGVAFLVSVCGVASN-----PLPQYSAGMLVLAAAFSCATLSWIGGSFVSLILLLIYLGGMLVVFAYSVTLTS--GSHVGAYGNWP---------VGVRLFVFLCMVLYMLDMWLS--------DRGVVQVDSVG----LGEFSGPVLGLADVQVDLFGVPLLYCS--GSVGLLLCI--SCLFICLFAVLGLTRGGRRGGMRPF +>Geocalamus_acutus +--MAYLMYLLGLMFVVSIMGVAMH-----PLPQFGAGGLVVATLFSCAMLALLGGSFISIVLLLIYLGGMLVVFAYSVALAV--DACEMVRDSWA---------VGVRLFVAVCVIMWFGELYTT--------S-GKFSSLMNG----IGDFCEVMPFPTEVQTDVCGVPMLYDA--GWVGLILCV--MCLFVCLFVVLAITRGVACGGLRVF +>Amphisbaena_schmidti +--MLYSVYFLGLAFMVSVVGVSVN-----PLPQYATGALVLAAGFSCASLAWIGGSFMSIILFLIYLGGMLVVFAYSVALSS--GPYLVKGVSWP---------VGMRLVGFLCVILYMVDVWGV--------GYGSGWYDYKG----LGEFGGPVLGCGEVQVDLCGVSLLYSW--GGIGLFLCV--FCLFICLFVVLGLTRGAGRGVSRPF +>Acrochordus_granulatus +--MEYINYLAIVFMVIFGVMLSVV-----SVSYYGVVALMGFVFFCCVIMVFMGQVFIALVMFIVYLGGLVVVFGYCVSLEK---DFVGLFSNMLW----KYVSLVGACFG-FIISLLVVSLFGF-D----------------GWFVTMWR-------GSCVDTMVNGFSVFYGD--GGVGLIVCL--WGLFMTLFSVLIILGWSKSVSFRSF +>Cylindrophis_ruffus +--MDYVFCLIMMLMVVVAVVLGTT-----PVSYYGVIALMGFAFLCCVFMCFISRTFVALVTYIVYLGGLVVVFSYCISVEKGVDNVFKLFVSKMF-------VCVSVFVA-AFFYLWIAVVFGL-D----------------GWLVVMDQ-------DSFACVEVNGFGVLYFS--GGAGLMVCV--WGLLVTLFSILVILSWHRLGGLRSF +>Xenopeltis_unicolor +--MDYVYCLVVTSMVVGAVVLGTT-----PVSYYGVISLMGLVFFCCVLMVGMGRTFVALVAYIVYLGGLVVVFSYCISVEKDLEDVFKVYTSKVF-------VFLFICIG-VVACLWVMLVLGL-G----------------DWLIGCGQ-------DCFVNVEVNGFGVLYFG--GGVGLIVCS--WGLLVALFSILVILSWHRWGGVRPF +>Python_regius +--MDYVFCLAITCVVVGAVVLSTT-----PVSYYGVIALMGLVFSCCIMMVGMGQTFVALVTFVVYLGGLVVVFSYCISVEKDVEDVLKVFTSKII-------VSLFVCVG-VVACLCAVFIFGL-G----------------EWLVVLGQ-------DCFICVEVNGFGVLYSG--GGVGLMVCS--WGLLVALFSILIVLSWYRLGGLRPF +>Boa_constrictor +--MDYFFCLLMMFMVVGVMVLSMT-----LISYHGVISLMGFVFLCCVFMSIIGRTFVALVMYIVYLGGLIVVFSYCISVEK--DRGVQSPASNFF-------MYFFVCAG-VVVYLWIVSFLGV-G----------------GWLVEVNQ-------DCFVCIGVNGFGVLYSS--GGFGLIVCS--WILFITLFSILVILSWYRRGGLRSF +>Ovophis_okinavensis +----MFFVEYLLYFILALVFFGVVILSFAVVPYQGVISLMGVSFFCCVAMILMGRTYAALVMYIVYLGGLVVVFGYCVSVEK----GGEVAGGGVWCLFVFVVVGVVVCVS-MLV---------V-G-GGG-----------QGLLIYSGW-------EDWVCLEVNGYGVFYCG--GGMGLVVCA--WGLVVALFSVLVILSWTRLGGFRPF +>Teratoscincus_keyserlingii +--MVYILFLSTMCLILGIAGVASN-----PSPFYGAVGLVVAAASGASILVMLGGSFLAVVLFLIYLGGMLVVFAYSVALSA--EPYPETWGDPF---------VLYRVWGCVVLVFVFFWGFG--G-LTGLEGWGL-EVAGGK--------------WESPPMDFSGVVRLYLD--GGCLLFFCG--WVLILALFVVLELTRGLSRGSLRAI +>Shinisaurus_crocodilurus +--MSYFVCMLFVGLVGGLVLVASN-----PSPYFGAASLVFAGAVGCGILVGIGGSFVALVLFLIYLGGMLVVFAYSIALAS--EPYPETWGNLS---------VGFYSMGYFVLVVGAGWVLG--G-MWSFNGFGLMVGDSCG--------------LGGVRNDFVGVSLIYSS--GGLDLLLSG--WGLMLTLFVVLELTRGLSRGGLRSV +>Bipes_biporus +--MTYVVYFLGVGLLLAVIGVAVN-----PAPYFAAGALAVAALFGSAILVWCGGLFLPVVLLLIYLGGMLVVFAYAIALVP--GERAGVYGGWQV-----WACVSGLVFVVFCLVELMI---------------G--VIDWGGY-CINGGFGVIGL-----QVDLGGVGGLYTF--GAWWLCMCG--VCLFVCLFVVLGLSFGGGRGAVRPF +>Bipes_tridactylus +--MMYITYLLGWAFLMAIVGVAIN-----PLPHFATGALAVAAVFGAAVLVWCGGLFLPVVLLLIYLGGMLVVFAYAIALVP--GERAEQYGGWGS-----WVWVFVLLFAGFCLVEWLF---------------GGNVSNFGG--------GASMLR---PQVDMCGVGGLYSF--GVLWLLVCG--VCLFICLFVVLWLSLGGERGAIRVF +>Dinodon_semicarinatus +--MNYFFSLVLVFLVLSVVVLGVV-----SAPYQGVVALMGVSFFCCIFMVFLGRTFAALVMYIVYLGGLVVVFGYCVSVEK--ESGIYSVGGTKY---------FIVCVS-LLLVVLLCLLREV-G----------------GLLVYVNW-------GDLVCLEMNGVGVFYFS--GGWGLIVCS--WGLLVVLFSILVILSWSRLGGLRPF +>Cordylus_warreni +--MTYVSIFLGLCFIVGVVSVASN-----PAPYYGVVGLVWSALVGCCVLVLSGVSFLSLVLFMIYLGGMLVVFAYSVALAS--EPYPETWGNFG---------VMVHFLGGMGLVFVLAW----WY-LEGFNFDGLGAVEVLG--------------LSMVRVDLGGSVMLYSW--GGWCLWLCG--VSLLLALFVVLEVASGGRRGGLREI +>Abronia_graminea +--MSYLIYIFFLCLMLALIWVATN-----PSPYFGAAGLVGSSVVGCGVLVGVGYSFVSLVLFLIYLGGMLVVFAYTVSLAS--EPYPEAVGD-----------SAGYFWSYFGLFVMMGMLMIMEG-TVGL-DYDVRTLP--G--------------MSLVNVDFVGVSLLYSW--GGFDLLVCG--WGLLLVLFVVLELTRGLHRSGLRSV +>Leptotyphlops_dulcis +--MTYLMFIVCLLVFYGFLGLCLC-----VYPEDGVVWLVFCFVLGSFMLGVIGVSFVALMLFIVYVGGMMVVFAYSVAVTS--EVGVKV-GRWVR-----K--VVSFCFG-VVAFCFGFYVVG-----------GLSFLFRVG-----------LLFDGSVSSDFDGVSLFYSD--GAFCLLICG--WGLFLVLFVVLELVRGGFRGALRAV diff --git a/example_files/pxaa2cdn_example/ND6_nuc.fa b/example_files/pxaa2cdn_example/ND6_nuc.fa new file mode 100644 index 0000000..e39dcca --- /dev/null +++ b/example_files/pxaa2cdn_example/ND6_nuc.fa @@ -0,0 +1,140 @@ +>Branta_canadensis +ATGGCTTACTTCATGTTTTTTTTAGGGATTTGCTTTGCGGTAGGTGTTTTGGGTGTAGCATCGAACCCTTCGCCGTATTACGGGGTCGTCGGTTTAGTGCTGGCGTCTGTAGCAGGGTGCGGGTGATTGCTGGGGCTCGGAGTTTCGTTTCTGGCTTTAGTGCTATTTATGGTGTATTTGGGGGGTATGTTGGTGGTGTTTGTTTACTCAGTGGCTTTAGCGGCGGAGCCTTTCCCTGAGGCTTGGGGGGATTGACGGGTAATTGGGTGTGGGGTGGCGTTTGTGGTAGTTGTCTTTGGGGGGCTGGTGTTTGGGGGGTTTATGGGGTCTTGAAAGTTTGAGGTTGCTACTGTGAATAATGTTGGGATGTTTGTTACTCGGTCAGATTTTTGTGGGGTTTCTATGTTTTATTCGCATGGGGCGGGAATGTTTTTGGTGGCGGGTTGGGGGTTGTTGTTGACTTTGTTTGTTGTGTTGGAGCTTGTGCGGGGGTTGTCGCGGGGTGCTATTCGGGCGGTT +>Numida_meleagris +ATGACTTATTTTATGATTTTTCTTGGGGTTAGCTTTATACTGGGGACTTTAGCTGTGGCATCTAATCCTTCTCCTTATTATGGGGTGGTGGGATTAGTATTAGCGTCTGTGGTTGGGTGTGGGTGGTTGATGAGTCTAGGGGTTTCTTTTATTTCTTTGGCGTTGTTTATGATTTATTTGGGGGGTATGTTGGTGGTTTTTGTTTATTCAGTGTCTTTGGCTGCTGATCCTTATCCTGAGGCATGGGGGAGCTGGCGGGTAGTGGGGTATGGGTTGGGTTTTGTGTTGGTAGTTTGTGCGGGGGTAGTTTTAGGGGGGCTTGTTGAGTTCTGAAAGGTGGGGGCTGTTACTGTTGATGGTGGGGGAATATCTTTTATGCGGTTGGATTTTAGTGGGGTTGCAGTGTTTTACTCGTGGGGTGTAGGCTTATTTTTGGTGGCGGGGTGGGGTTTATTGTTGGTTCTGTTTGTTGTGTTAGAGCTTGTGCGTGGGCTGTCTCGGGGGGCAATTCGGGCAGTT +>Aythya_americana +ATGACTTATTTTGTATTTTTTCTAGGGGTTTGCTTTGTAGTTGGTGTTTTGGGCGTAGCATCGAATCCTTCGCCGTATTATGGGGTTGTTGGTTTGGTTTTGGCGTCTGTAGCAGGGTGTGGTTGATTGTTGAGTCTCGGGGTTTCGTTTGTTGCCCTGGTGCTGTTCATGGTGTATTTGGGGGGTATGTTGGTGGTGTTTGTTTATTCTGTGGCTTTGGCGGCGGAGCCTTTTCCTGAGGCTTGGGGTGACTGGCGTGTAGCCGGATATGCGGCGGCGCTTGTAGCGGTAGTCTTAGCAGGGCTGGTGTTAGGGGGGTTTGTTGGGTCTTGGGGGTTTGGGGTTGTTACTGTTGATAGTGTTGGGATGTTTACTGTGCGGCTGGATTTTAGTGGGGTTGCGATGCTTTATTCACGAGGGGTTGGGATGTTTTTGGTTGCAGGTTGGGGGTTGCTGTTAACTTTGTTTGTTGTGTTGGAGCTTGTGCGGGGGTTATCTCGGGGGGCTATTCGGGCAGTT +>Alectura_lathami +ATGACTTATTTTGTACTTTTTCTTGGGGTGAGTTTCATGTTAGGAAGTTTGGCTGTTGCATCTAATCCTTCGCCTTACTATGGGGTAGTGGGTTTAGTACTGGGGTCTGTAGCTGGGTGTGGGTGATTGTTAAGCTTGGGGGGTTCTTTTGTGTCTTTAGTGCTTTTTATAGTTTATTTAGGGGGGATGTTAGTTGTTTTTGTCTATTCGGTGGCTTTAGCGGCGGACCCCTTTCCTGGGGCGTGGGGGGATTGGCGAGTAGTTGGGTATGGGGTCGGTTTTGTATTGGTGGTTTTTGTTGGGGTGGTCTGGGGAGGGTTTGTGGATTTTTGAGGGGTTGAGGTTAATACTGTTGATGGTGGGGGCAGCACTTTAATGCGGTTAGATTTTAGTGGGGTTGCGGTGTTTTACTCGTATGGGGTGGGGTTATTTTTGGTGGCTGGGTGAGGGTTGTTACTGACTCTATTTGTTGTGCTGGAGCTTGTGCGAGGGTTGTCTCGGGGGGCAATTCGGGCAGTT +>Caiman_crocodilus +ATGGAATTTACATTGTTTTTGGGTTGTTTGGTGTTGATGTGTGCGGTAATGGTTGGGGCAAATTCTGGGGTTCATTTTGCTGTGCTGAGTTTAGTTTTTATGGCTATGTTGGGTAGTGGTTTGGTGGTGATTGAGGGTGGGAGTTTTATGCCTTTAGTGGTGTTGTTGGTTTGTTTGGGGGGGTTGTTGGTTGTGTTTGCTTTTTGTGTGGGGTTTACTGATGATCCGTTTGGTGGGGTTGGGGTCTCTAAGGAGTTTGTGTTTTTTTGTTTGGTTGGGTTGGTCGTGGTGGTAGGTTGTGTGTGTGGGTACTTGCGAGATTGTTGGGTTGTTGGGGTGAGTGGAATGGTGGGTGTAGAAGTTGTTGGAAGTGGTGCAGCTAATGAGTTGTTGGGAGTTGGGTTGATGTATTCAAGTGGGTGGGGGTTTGTTTTGGTGTGTAGTTGGGCTTTGTTAGTTGCGTTGTTCGTGATTACGGGGATTGTTCGTGGTCATTGTTTAGGGTCGCTTCGTTCCTTC +>Alligator_sinensis +ATGGAGATTACGTTGTTTTTTTGTTGTTTTATACTAGTATGTGCGATAATGGTAGCGGCAAGTTCAATGATCCACTTTGCTGTAGTGAGCTTGCTTTTTGTGGCTGTGTTCGGTAGTGGTTTGGTAGTAGTTGAGGGTGGAAGTTTTATGCCCCTGGTGGTATTATTAATTTATCTGGGGGGCTTACTGGTGGTATTTGCTTTTTGTGTGGGGTTCACTGATGATCCTTTTATAGGGTTTTGAGGGGTGGGGGTATCCAAGGGGGCTGTGTTTCTTTATTGAGTGGGGTTGTTGATCGGGATCTGTTGTGCGTGGGGGTATTTGTGAGGGGGGATGTGGATTAGTGTGGGAGAGCCTTGGAGTGAGGTTGTGGTCGGTGAGTCATTAGGGGTCAGTGAGATGTATTGTAATGGGTGAGTATTTGTTGTGGTGTGTGGATGAGCCCTGCTAATTGTATTATTCGTAATCACGGGGCTCATTCGTGGCCATCGGCGAGGGGCATTTCGTTCTTTT +>Alligator_mississippiensis +ATGGGATTTACGTTGTTTCTTTGTTGTTTGATATTAGCATGTGCGATGATGGTGGCGGCAAGTTCAATAATTCATTTTGCCGTGGTAAGTTTACTTTTTGTAGTTGTATTCGGTAGTGGTTTGTTAATTATTGAGGGTGGAAGTTTTATGCCTTTAGTGGTGTTATTAGTTTATTTAGGGGGGTTATTGGTGGTGTTTGCTTTTTGTGTTGGGTTTACTGATGATCCATTTGGGGGGTTTTGAGGAGTGGGGGTGTCTAAGTGGGTCGTATTTTTTTGATGGGCGGGGTTCTTTCGTGGGGTTTATTCACGATATTGGCGTTTGTGGTGTTGGGGAAAGACTAGTGCGGGGGAGTTTTGGGGCGAGGTAGTTAGTAGTGAGTTGTTAGGGGTTAGTCAGATGTATTCTGATGGGTGGGCGTTCATTGTGGTGTGCGGGTGAGCTTTACTGGTGGTGTTATTCGTAATTACAGGGTTTGTTCGAGGGTATCGTCAGGGGGCGTTTCGCTCTTTT +>Chrysemys_picta +ATGATATACTTTATGTTTTTGTTTGGATTTTGCTTTGTCTTTTGAATAGTGGGTGTGTCTTGTAATCCATCACCCTATTATGGTGTTCTTAGTTTAGTATTAGGGGCAGCTTCTGGGTGTGGAGTATTGGTTGGTATGGGAGGATCTTTTATGTCTTTGGTGCTATTTTTGATTTATTTAGGGGGGATGTTAGTGGTTTTTGCTTATTCATCTGCGTTAGTGGTAGATCCTTATCCGGCGGGTTGGGGAGGTTTAGGGGGGTTGGTTTATGTGGTAGGGTTTGTACTGCTTGTTTTAGGTCTTGTAGTTATAGGTTCTTTTTTGTGTGGTGTAGAAGGGTTTGGGGAGGTTACGGCTGATGGTGTCGGGCTGTGTGTTGTTCGTTTGGATTTTGGTGGGGTTTCGTGGTTTTATTATTATGGTAGTGTGATGTTTTTGATTTCTGGTTGAGGGTTGTTATTGACATTATTTGTTGTATTGGAGATGGTGCGGGGTTTATCTTGTGGGACGTTACATTCTATT +>Pelomedusa_subrufa +ATATATGTTTCTATGTTATTTGGGTTTAGTTATGTATTTTGGTTGATTGGGGTGTCTTCAAATATTTCAGTTTATTATGGTGTTGTAAGTTTGGTGTGTACAGCGGGAACAGGGTGTGTAGTATTAGCTTGGAAGGGGGGTTCTTTTTTGGCTTTAGTATTATTTTTAATTTATCTTGGGGGTATGTTGGTTATTTTTGCTTATTCTATTACATTGGTAATGGAGCCTTTTCCTGAGGTAATGGGGGATTGGGTTGGGGTGATACATGCGGGTAAGTATGTGGTGTTAGCGGTGGTTTTTGTGTTGGTTGGTTGGGGTTGATGGGGGGTTGGTGAATGTGGTGACGGGGTGGTTGATGCTGGGGGGTTGTCTATTGTTCGGGTTGATTCTTCAGGGTTGTCTTTGTTGTATGCTATTGGGGGTGGGGCATTGATAATGGCTATGTTTGGGCTGTTTTTGACTTTTTTTATTGTTTTAGTGCTGGTTCAAGGGTTGTTTCGGGTAGCTTGTCCAACTATT +>Chelonia_mydas +ATGATATATTTTGCATTTTTGTTTGGGTTTTGTTTTGTTTTTTGGATAGTTGGTGTGTCTTGTAATCCGTCTCCTTATTATGGGGTTTTAAGCTTGGTTTTGGGAGCGGCCTTTGGGTGTGGGTTGTTGGTTAGTATGGGAGGGTCTTTTGTTTCTGTGGTGTTGTTTTTGATTTATTTAGGTGGTATATTGGTTATTTTTGCTTATTCATCTGCGTTAGTGGAAGAGCCTTATCCTGTTGCTTGGGGAAGTCAAGGTGGAGTGGTTTATGTAGTAAGTTATGTTTTAGTTGTTCTGGTATATGGGATAATATGTTATTGATTGTGGAGTATGGAAGGGTATGGTAGTGTTACAGTTGATGCTGGTGGGTTGTTTGTTGTTCGATTAGATTTTAGTGGGGTAGCGTGGTTTTATTATTTTGGTAGTTGGTTATTTTTGATTGCAGGTTGAGGGTTGTTGTTGACGTTGTTTGTTGTGATAGAGTTAGTTCGTGGTTTGTCTCGTGGAGTTATTCGTCCAATT +>Dogania_subplana +ATGGTGTTTTTTATATTTTTATTTGAGGTTTGTTTTATTTTTTGGGTTGTTGGTGTGGCTTCTGGTCCTTCTCCTTATTACGGGGTTGTTGGTTTGGTGTTTGGGGCGGTATTTGGAAGTTTAATGTTGGTTGGATTGGGTGGGTCGTTTATTTCTTTAGTGTTGTTTTTAATTTATTTGGGGGGTATGTTAGTGGTTTTTGCTTATTCTGTAGCTTTGACAGGAGATCCCTATCCTTCAGCTTGGCGAAGTTATGGGGATTTATTTTGTATAGTTGGCTATGTTTTGTTGGTTATTGGTGCGGCTATGTTTTGTTTTAGTGTGTGGAGTTTAGAGGGGTATGGGGATGTTGTGGTGGATGCTGATGGTTTGTTTAGTGTACGTGTTGATTATGTTGGGGTATCATGGTTTTATTATTATGGGTGTGTAATGTTTTTTGTTGTTGGTTGGGGTTTGTTGTTGACGTTGTTTGTTGTTTTAGATTTAGTTCGAGGTTTAGTTTGTGGGGCGATTCGTTCTATT +>Chinemys_reevesi +ATGATGTATTTTATGTTTTTATTTGGGTTTAGTTTGTATTGAATGATGGGTGTTTCTTGTAACCCGTCCTCCTTATTATGGGGTGTTAGTTTAATTTTTGGTGCGCTTATTTGGAGTGGGGTGTTGTTGTATGGCTATTGGTTATTTTTGCTTATTCATCTGCGGTGGAAGAGCCTTATCCTGTTGCTTGGGGAAGTCAAGGTGGAGTGGATAGCGGAGCCTTATCCTGTTGCTTGGGGAAGTCAAGGTGGAGTGGTTTATGTAGTAAGTTATGTTTTAGTTGTTCTGGTATATGGGATAATATGTTATTGATTGTGGAGTATGGAAGGGTATGGTAGTGTTACAGTTGATGCTGGTGGGTTGTTTGTTGTTCGATTAGATTTTAGTGGGGTAGCGGGGTTTTATGGTGTGGAAAATGGGTTGCTTTTGATGCTGGTTGAGGGCTATTGTTGACGTTGTTTGTTGTGT +>Pelodiscus_sinensis +ATGGTGTTTTTTATATTTTTATTTGAGGTTTGTTTTGTTTTTTGAATTATTAGTGTAGCTTCTGGTCCCTCTCCTTATTATGGGGTTGTTGGTTTGGTTTTTGGGGCGGTTTTTGGATGTTTAATGTTGGTTGGGGTGGGTGGGTCATTTATTTCTTTGGTTTTGTTTTTGATTTATTTGGGAGGTATGTTAGTGGTTTTTGCTTATTCTGTGGCTTTGACGGGGGATCCATATCCTTCGGCTTGGCGTGGGTACGGGGATTTATTTTGTATAGTTGGTTATGTTTTGTTTGTTGTTGGTGCAGTTATGTATTGTTTTGATAAGTGAAGTTTAGAGGGGTATGGTGATGTGGTGATGGATGCTAGTGGTCTGTTTAGTGTTCGTATGGATTATATTGGGGTGTCGTGATTTTATTCTTATGGGTGTGTAATATTTTTGATTGCGGGTTGGGGTTTATTGTTGACGTTGTTTGTTGTATTAGATTTGGTACGTGGTTTGGCTTGGGGGACTATTCGTTCTATT +>Gallus_varius +ATGACTTATTTTGTGATTTTTCTTGGAATTTGTTTTATGTTAGGGGCTTTGGCTGTGGCATCTAATCCCTCACCGTATTATGGGGTAGTGGGGTTGGTGGTAGCGTCTGTAATAGGATGTGGGTGGTTGGTTAGTTTGGGTGTTTCTTTTGTTTCTTTAGCGCTTTTTCTGGTGTATTTGGGGGGGATGTTGGTGGTTTTTGTGTATTCTGTGTCATTGGCTGCAGATCCTTATCCTGAGGCTTGAGGGAGTTGACGGGTGGTGGGGTATGGATTAGGTTTTGTTCTGGTGGTTTGGATGGGGGTGGTTCTGGGGGGGTTTGTTGATTTTTGAAAGGTGGGGGTGGTTACTGTTGATGGTGCGGGTATGTCTTTTGGTCGGTTGGATTTTAGTGGAGTTGCGGTGTTTTATTCGTGTGGGGTTGGGTTGTTTTTGGTGGCTGGGTGGGGTTTGTTGTTGGCTTTGTTTGTTGTACTAGAGCTTGTGCGTGGGTTGTCTCGGGGAGCAATTCGGGCGGTT +>Pterodroma_brevirostris +ATGGCTTATTTTGTGCTTTTTTTAGGGCTGTGTTTTGTTTTGGGGGGACTAGCAGTTGCGTCTAATCCTTCTCCTTATTATGGGGTAGTTGGTTTAGTGATAGGATCTGTTGTAGGGTGTGGGTGGTTGTTAAGTTTAGGGGTTTCTTTCGTGTCACTGGTGCTGTTTATGGTTTATTTAGGCGGAATGTTGGTGGTTTTTGTGTACTCTGTGTCCTTGGCAGCAGACCCTTTTCCTGAAGCTTGGGGGGATTGACGCGTTGTGGGGTATGGGGTGGGGTTTAGTTTAGTTGTTATGGTTGGGGTTGTCATTGGGGGGTTTGTTGAGTGATGGAAGCTGGGGGTGGTTACTGTTGATGGGAGTGGTCCATTCCTAGTTCGGTTGGATTTTAGTGGGGTGGCTATGTTTTATTCGTCCGGGGTGGGAATGTTTTTGATGGCTGGATGGGGGCTTTTGTTGACTTTGTTTGTTGTGTTAGAACTTGTGCGGGGGTTGTCTCGTGGGGCAATTCGGGCAGTT +>Diomedea_melanophris +ATGGCTTATTTTGTACTTTTTTTGGGGCTGTGCTTTGTTTTAGGGGGGCTGGCAGTTGCGTCTAATCCTTCACCTTATTATGGGGTGGTTGGTTTGGTATTGGCATCTGTTGTAGGGTGTGGGTGGTTGTTAAGTCTAGGAGTTTCTTTTGTGTCGTTAGTACTGTTCATAGTGTATTTGGGTGGGATGTTGGTAGTTTTTGTGTACTCTGTATCTTTGGCAGCGGATCCTTATCCTGAAGCTTGGGGGAGTTGAGGAGTTGTGGGATATGGGATGGGGTTTATTTTGGTGCTTGCTGTTGGGGTAGTTGTGGGAGGTTGGGGTTTAGTGGAGTGTTGGAAGTTGGGGGTGGTTACGGTTGATAGTGGAGGGGTATTTTCTGTTCGGTTGGATTTTAGCGGCGTGGCTATGTTTTATTCATATGGGGTGGGGATGTTTTTAGTAGCAGGATGGGGGTTATTGTTGACCTTGTTTGTTGTGTTGGAACTGGTACGAGGGTTGTCGTGTGGAGCTATTCGGGCAGTT +>Gavia_stellata +ATGACCTACTTTGTACTGCTTTTAAGTGTATGCTTTATTTTGGGGGGTTTGGCAGTGGCGTCTAACCCCTCACCTTACTATGGGGTGGTTGGTTTGGTGCTAGCGTCAGTGGTAGGTTGTGGATGGCTACTGAGTTTGGGGGTTTCATTTGTATCGTTGGTTCTATTTATGGTCTACTTGGGTGGAATGTTGGTGGTTTTTGTGTACTCTGTATCTTTGGCGGCGGATCCATTTCCTGAGGCTTGGGGGGATTGACGTGTTATGGGGTATGGTGCTGGGTTTGCTCTGGTGCTTACTGCAGGGGTAGTGGTGGGGGATTTTGTTGAGTGGTGAAAGTTTGGGGCGGTTACTGTAGATAGCGGGGGGATGTTCTCTGTTCGGTTGGATTTTAGTGGGGTAGCTATATTTTACTCGTATGGGGTGGGGATATTTCTGGTGGCGGGATGGGGGTTGCTGTTGACTCTGTTTGTTGTATTGGAGCTTGTTCGAGGGTTGTCCTGTGGAGCTCTTCGGGCGGTT +>Larus_dominicanus +ATGACTTATTTTGTGCTTTTTTTGGGATTATGTTTTGTTTTGGGGGGTTTGGCGGTTGCATCTAATCCTTCTCCTTATTATGGGGTAGTTGGTTTGGTCTTAGCTTCTGTTGCAGGGTGTGGGTGGTTATTAAGTTTGGGGGTTTCTTTTGTATCTTTGGTGTTGTTTATGGTGTACTTGGGGGGAATGTTAGTGGTTTTTGTTTATTCCGTGTCTTTGGCTGCAGATCCTTTTCCGGAGGCTTGGGGTGATTGGCGAGTTGTTGGGTATGGAGTAGGGTTTGTTCTAGTACTTGTGGTAGGCGGGGTTGTTGGGGGGCTTGTTGAATTTTGGCACCCCGGGGTGATTACTGTTGATAGTGGTGGTATATTTTCTGTTCGGTTGGATTTTAGTGGTGTAGCAATGTTTTATTCTTGTGGGGTTGGGATGTTTTTGGTGGCAGGTTGAGGGTTGCTGTTGACCCTGTTTGTTGTGTTGGAGTTGGTGCGGGGGCTATCTCGTGGTGCTATCCGGGCAGTT +>Ninox_novaeseelandiae +ATGACGTACTTTGTGCTCTTTGGGGGGGTGTGGTTTGTTCTGGGGGGGTTGGCAGTGGCGTCCAACCCTTCGCCTCATTATGGGGTTGTGGGGTTGATGGTGGGGTCGATTTCTGGGTGTGTGTGGCTGTTGAGTTTGGGGGTTTCTTTTGTGTCATTGGTGCTGTTTATGGTATATTTAGGGGGGATGTTGGTGGTTTTTGTGTACTCTGTTGCTCWAGCGGCAGATCCTTTTCCGGAGGCTTGGGGGGATTGGCGTGCTGTAGGGTATGGCGTGGGGTTGGTATCTGCGTTGGTTGGGGTAGCTGGTATGGGTGGGGTGATGGGGTGGTGGGGGTTGGTTGGCGGTACTGTGGATGGTGGGGGTACATCTTTGGTTCGGTTGGATTTTAGTGGGGTGTCTTTATTTTATTCCTGTGGGGTAGGGATGTTTTTGGTGGCTGGGTGGGGGCTGTTGCTTACGTTGTTTGTTGTTTTAGAGTTAGTGCGGGGGTTGTCGCGGGGGGCAATTCGGGCGGTT +>Strigops_habroptilus +ATGGCCTATTTCGTGCTTTTTTTGGGGATTGGGTTTGTTCTGGCTGCATTAGCGGTTGCTTCCAACCCATCGCCTTATTATGGTGTTGTTGGGTTGGTATTTGGGTCTATTGTAGGGTGTGGGTGGTTAGTAAGTTTAGGTGCTTCTTTTGTATCTTTGGTGCTGTTTATGGTGTATTTGGGTGGGATGTTGGTAGTTTTTGTGTATTCTGTTTCGTTAGCTGCCGATCCTTTTCCTCAGGCTTGAGGGGATCGGCATGTGATAGGGTATGTTGTTGGACTTGGTTTAGTGGTTGGTTTGGGGCTTGCTCTTGGAGGTTTGGAGATTAAGTTTGGGGTAGAGACTATTGATAGTGTGGGGTTATTCTTTGTTCGATTAGATTTTAGTGGGGTGGCTATGCTCTATTCCTGCGGGGTAGGAATATTTTTGGTGGCTGGTTGGGGGCTGTTGTTGACTCTGTTTGTGGTGTTGGAGCTTGTACGTGGTTTGTCTCGTGGGGCTATTCGAGCTGTT +>Eudyptula_minor +ATGACTTATCTCGTATTGTTTTTGGGAGTATGTTTTGTTTTGGGAGGGTTGGCCGTTGCGTCCAATCCCTCTCCTTATTATGGGGTAATTGGTTTAGTGTTGGCTTCTGTTATGGGGTGTGGATGGTTGTTGAGTCTGGGGGTTTCCTTTGTATCGTTGGTGTTATTTATGGTTTATTTGGGGGGGATGCTGGTGGTTTTTGTGTACTCTGTGGCTTTGGCTGCAGATCCGTTTCCTGAGGGTTGAGGAGAGTGGCCTGTTGTGGTGTATAGTGTGGGGCTTATTCTGGTACTTGGTGTTGGACTCGGAGTTGGAGAGTTTGGGGGATGGAAATTTGGGTTGAGTACTGTTGATAGTGAGGGGGTAATGTCCGTTCGCTTAGATTTTAGTGGGGTGGCTTTGTTTTATTCGTATGGGGCAGGAATGTTTCTAGTGGCGGGGTGGGGGTTATTGTTGACGTTATTCGTTGTGCTAGAGCTTGTGCGGGGGTTATCTCGTGGGGCGATTCGTGCCGTT +>Anomalopteryx_didiformis +ATGACTTATTTTGTTCTTTTTCTAGGGGTATGTTTTATTTTGGGGGCTTTGGCGGTGGCGTCTAATCCTTCTCCGTACTATGGGGTACTTGGTTTGGTGGTGGGGTCTGTTATGGGGTGCGGGTGGCTGTTGAGTTTGGGGGCCTCTTTTATCTCTCTGGTGTTGTTTTTGGTGTATCTGGGGGGAATACTAGTGGTCTTTGTGTACTCTGTGTCTTTGGCTGCTGATCCTTTTCCAGAGGCTTGAGGGGATTGGCGGGTTTGGGGGTTTGGTGCTAGTTTAGTTTTGGTGGTGTTTGGGGGATTGGTGGTGATGGGGTTGGTGGGTGTTACGGTGGGAGGTGTGGGTACTGTAGATTGTGGGGGTATGGTCTCTGTTCGTACGGATTTTAGTGGGGTGGCAATGTTTTATTCTTGGGGAGGAGGAATGCTCTTGGTTGCGGGTTGGGGACTGTTGTTAACTCTATTTGTGGTGTTGGAGCTTGTACGGGGGGTATCTCGGGGGGCAATTCGAGCGGTG +>Apteryx_haastii +ATGTCTTACCTTGTGTTTTTTTTAGGGTTGTGCTTTGTTTTGGGGGTACTAGCGGTGGCTTCTAATCCTTCACCTTACTATGGGATTCTTGGGTTGGTTGTAGGATCAGTTGCTGGGTGTGGCTGTTTGTTGAGTTTGGGAATATCGTTTGTATCTTTAGTGTTACTTTTGGTATATTTGGGGGGAATACTTGTAGTGTTTGTCTATTCTGTGTCGTTGGCTGCTGATCCATTTCCTGAGGCTTGGGGGAATTGGCGGGTCTGAGGTTATGGTATGGGGTTTTTGTTAGTTATTTTTGTGGGAGTGGTAGTGGGAGGCTTAATGGAGCTTGAGATGGGAGGAGTGCGTACTGTGGATTGTGGAGGTCCAGTTTCTGTTCGGATAGATTTTAGCGGGGTAGCTATGTTTTATTCTTGGGGGGTGGGGATGTTTTTGGTTGCAGGGTGAGGGTTATTGCTCACTTTGTTTGTGGTTTTGGAGCTTGTACGGGGGTTATCTCGGGGGACGATTCGGGCAGTG +>Arenaria_interpres +ATGACTTATTTTGTTTTATTATTGGGATTGTGCTTTGTATTGGGGGGTTTGGCTGTTGCGTCCAATCCTTCTCCTTATTATGGTGTAGTTGGTTTAGTGCTGGCTTCTGTTGCAGGATGTGGGTGGTTGTTAAGTTTGGGTGTTTCTTTCGTGTCATTGGTGTTGTTTATGGTTTATTTAGGGGGGATGATTAGTGTTTTTGTATCTTCTGTGTCTTTGGCGGCAGATCCTTTTCCTGAAGCTTGAGGGGATTGACGTGTTGTTGGGTATGGTGTAGGCTTTATGTTGGTGGTAATTAGCGGTATAGTTGTTGGAGGGATTGGTGAGTGTTGAAAGGTTGGGGTGGTTACTGTTGATAGTGGGGGGATGTTTTCGGTGCGGTTGGATTTTAGTGGGGTGGCCATGTTTTATTCCTATGGGGTTGGGATGTTTTTAGTGGCCGGATGAGGATTGTTGTTAACTTTGTTTGTAGTGTTGGAGTTGGTACGAGGGTTGTCTCGTGGGGCTATTCGAGCAGTT +>Aythya_americana +ATGACTTATTTTGTATTTTTTCTAGGGGTTTGCTTTGTAGTTGGTGTTTTGGGCGTAGCATCGAATCCTTCGCCGTATTATGGGGTTGTTGGTTTGGTTTTGGCGTCTGTAGCAGGGTGTGGTTGATTGTTGAGTCTCGGGGTTTCGTTTGTTGCCCTGGTGCTGTTCATGGTGTATTTGGGGGGTATGTTGGTGGTGTTTGTTTATTCTGTGGCTTTGGCGGCGGAGCCTTTTCCTGAGGCTTGGGGTGACTGGCGTGTAGCCGGATATGCGGCGGCGCTTGTAGCGGTAGTCTTAGCAGGGCTGGTGTTAGGGGGGTTTGTTGGGTCTTGGGGGTTTGGGGTTGTTACTGTTGATAGTGTTGGGATGTTTACTGTGCGGCTGGATTTTAGTGGGGTTGCGATGCTTTATTCACGAGGGGTTGGGATGTTTTTGGTTGCAGGTTGGGGGTTGCTGTTAACTTTGTTTGTTGTGTTGGAGCTTGTGCGGGGGTTATCTCGGGGGGCTATTCGGGCAGTT +>Buteo_buteo +ATGGCTTATTTTGTCCTTCTTCTGGGGATGGGGTTTGTTTTAGGGGGTTTGGCGGTGGCATCTAACCCGTCGCCTTATTATGGGGTAGTTGGGTTGGTGTTGGGGTCTGTTGTAGGGTGTGGGTGGTTGGTAAGTCTAGGAGTACCGTTTGTGGCTTTAGTGTTGTTTATGGTGTATTTAGGTGGAATGTTAGTGGTTTTTGTTTATTCAGTCTGCTTAGCAGCGGATCCTTTTCCGGAGACTTGAGGGGATTGACGAGTTTTAGGGTATGGAGCAGGGATGGTTCTGGTGCTTGTTGTGGGGGTGGTTGTTGGTGGGGTTGAGTGCTGGAAGATTGGGGTGGTTACTGTAGATAATGGAGGTACTTTTGTGGATCGGTTGGATTTTAGTGGTGTTGCCATGTTTTATTCGTGGGGGGCAGGGATGTTCTTGGCGGCCGGGTGAGGGTTGTTGTTGACGTTATTTGTTGTACTGGAGCTTGTGCGTGGGTTGTCTTGTGGGGCGATTCGGGCGGTT +>Casuarius_casuarius +ATGACCTATTTTATTTTTTTCTTAGGGTTGTGTTTTATTTTAGGAGCGTTAGCGGTAGCGTCTAATCCGTCTCCTTATTATGGGGTGCTTGGTTTGGTGGTAGGGTCTGTTGTTGGGTGTGGGTGGTTGCTAAGTCTTGGGGTGTCTTTTATTTCTTTAGTATTGTTCTTGGTGTATTTAGGGGGTATGTTGGTGGTTTTTGTGTACTCTGTGTCTTTAGCTGCTGATCCTTTTCCTGAGACTTGAGGGGATTGGCGTGTGTTGGGTTATGGTGTTGGGCTAGCTCTGGTTGTCTTTGTAGGAGTGGTGATGGGGGATTTTATAGGGGTGGGGGTTCAGGGTGTGGGTACTGTAGACTGTGGGGGTGCTGTTTCCGTTCGTATAGATTTTAGTGGGGTGGCTATGTTTTATTCCTGGGGCGCGGGGATGTTTTTGGTTGCGGGATGGGGGTTGTTGCTAACTTTGTTTGTGGTTTTAGAGCTTGTGCGGGGGTTATCTCGGGGGGCGATTCGGGCTGTT +>Ciconia_boyciana +ATGGCTTATTTTATGTTTCTTTTAGGGGGGTGTTTTGCTCTAGGGGCATTGGCGGTTGCATCTAACCCTTCTCCCTACTATGGGGTAGTTGGTTTGGTTGTGGCGTCTGTTGTAGGGTGCGGCTGGCTACTGAGTTTGGGAGCTTCCTTTGTATCGCTTGTACTGTTTATGGTGTATCTGGGGGGGATGCTGGTAGTTTTTGTTTATTCGGTGGCTTTGGCGGCGGATCCTTTTCCCGAAGCTTGGGGGAGCCGGCAAGTTGTAATGTATGGTGTGGGGCTTATTTTGGTGCTGATGGTTGGGGGGGCTGTTGGAGGTTTTGCTGAGTGCTGGAAGGTGGGGGTGGTTACGGTTGATAGTGGGGGTTTGTCTTTTGCTCGGTTAGATTTTAGTGGGGTGGCAATGTTCTATTCGGAGGGGGCAGGAATATTTCTGATAGGGGGATGGGGGTTGCTGCTGACGCTGTTCGTTGTACTGGAGGTTGTACGAGGGCTATCTCGTGGGACGATTCGAGCAGTT +>C_ciconia +ATGGCTTATTTTATGCTTCTTTTAGGGGGATGTTTTGCTTTGGGAGCGTTGGCGGTTGCATCTAATCCTTCTCCCTATTATGGGGTAGTTGGTTTGGTTGTGGCCTCTGTTGTGGGGTGCGGCTGGCTACTGAGTTTGGGAGCTTCCTTTGTGTCACTCGTACTGTTTATGGTGTATTTGGGGGGGATGCTGGTGGTTTTTGTTTATTCGGTGTCCTTGGCGGCGGATCCTTTTCCTGAAGCTTGGGGGAGCCGGCAGGTTGTAATGTATGGTGTGGGGCTTATTTTGGTGCTGATGGTTGGGGGAGCTGTTGGAGGTTTTGCTGAGTGCTGGAAGTTGGGGGTGGTTACAGTTGATGGTGAGGGTTTGTCTTTTGCTCGGTTAGATTTTAGTGGGGTGGCAATGTTCTATTCGGAGGGGGCGGGGATATTTCTGATAGGGGGATGGGGGTTGCTGCTGACGCTGTTCGTTGTATTGGAGGTTGTACGAGGGTTATCTCGTGGGACGATTCGAGCAGTT +>Corvus_frugilegus +ATGATAAATTTTGTACTTTTTATAACCCTATGCTTTGTTCTAGGAGGGTTAGCGGTTGCGTCTAACCCTTCTCCTTATTATGGGGTGGTGGGTCTGGTTGTGGCTTCTATTGCGGGATGTGGGTGATTGTTAAGTATGGGGGTTTCTTTTGTCTCTTTAGTGCTGGTTATAGTATATTTAGGGGGGATGCTGGTAGTGTTTGTTTACTCAGTGTCGCTGGCAGCGGATCCTTATCCTGAGTCTTGGGGAGATTGACGGGTTGTTGGTTATGGTGTTGGTATAGGGTTAGTTGTTGTTATTGTGGGGGTTGTTATGGGAGCGTTTTCTGAAGTGGTTATGGGAGGGGATACGGTGAATAATGGAGGTCTGTCGTGAACTCGAACTGATTTTAGTGGAGTAGCTATGTTTTACTCGTCTGGGTCAGGGCTGCTTTTAATTGCAGGGTGAGGCCTACTGTTAACACTGTTTGTGGTTTTAGAACTTGTACGGGGACTATCTCGGGGGGCAATTCGGGCGGTT +>Coturnix_japonica +ATGACTTATTTTGTGATTTTTTTAGGAGTTTGTTTCATGTTGGGGACTTTGGCTGTAGCGTCTAATCCTTCGCCGTATTATGGGGTGGTGGGGTTGGTGTTAGCGTCTGTGGTAGGGTGTGGGTGGTTGGTGAATTTAGGGGTTTCTTTTGTTTCTTTGGTGTTGTTTATGATTTATTTAGGGGGGATGTTGGTGGTTTTTGTGTATTCTGTTTCTTTAGCTGCGGATCCGTACCCAGAGGCTTGGGGAAGTTGACGGGTGATGGGGTATGGGTTAGGTTTTGTTTTGGTAGTTTGTATGGGAATGGGTTTAGGGGGGTTTGTTGATTTTTGAAAGATTGGTGTGACTACAGTTGATAGTGGGGGGATGTCTTTTGTTCGGTTGGATTTTGGTGGGGTAGCAGCGTTTTATTCATATGGGGTGGGGTTGTTTTTGGTAGCTGGGTGGGGTTTGTTGTTGGTTTTGTTTGTTGTGTTGGAGCTTGTGCGCGGGTTATCTCGGGGTGCGATTCGGGCAGTT +>Dinornis_giganteus +ATGACCTATTTTGTTCTCTTTTTAGGGGTGTGTTTTATTTTGGGGGCTTTGGCAGTGGCGTCCAATCCTTCTCCTTATTATGGGGTGCTTGGTTTAGTGGTGGGGTCTGTTATGGGATGTGGGTGGCTGTTGAGTTTGGGGGCCTCTTTTATCTCTCTGGTACTATTCTTGGTATATTTAGGGGGGATATTAGTGGTTTTTGTGTACTCTGTGTCTTTGGCGGCTGATCCTTTTCCGGAGACTTGGGGGGATTGGCGGGTTTTAGGGTTTGGTGCTGGTTTAGTCTTAGTGGTGTTTGGGGGATTAATAGTGGCAGGGTCGGTGGGTGTTATGGTGGGAGGCGTGGGTACTGTGGATTGTGGGGGTATGGTCTCTGTTCGTACAGATTTTAGTGGGGTAGCAGTGCTTTATTCTTGAGGGGGAGGAATGCTCTTGGTTGCGGGTTGAGGGTTGTTGTTGACTTTGTTTGTGGTGTTAGAGCTTGTACGGGGAGTATCTCGGGGGGCAATTCGAGCGGTG +>Dromaius_novaehollandiae +ATGACCTATTTTATTTTTTTCTTAGGGTTATGTTTTATTTTAGGAGCATTAGCGGTAGCGTCTAATCCGTCTCCTTATTATGGGGTACTTGGTTTGGTGCTAGGGTCTGTTGTTGGGTGTGGGTGGTTGTTAAGTCTTGGGGTGTCTTTTATTTCTTTAGTGTTGTTTTTAGTTTATTTGGGGGGTATGTTGGTGGTTTTTGTGTACTCTGTGTCTTTGGCTGCTGATCCCTTCCCTGAGACTTGGGGAGACTGGCGGGTATTGGGGTATGGTGTTGGTTTAGTTTTAGTGGTTTTTGTGGGAATGGTGGTTGGGAATTTTGTGGGTGTAGGGGTTCAAGGTGTGAATACTGTGGATTGTGGGGGTGCTGTTTCTATCCGTATGGATTTTAGTGGGGTAGCTATGTTTTATTCTTTAGGTGCAGGGATGTTTTTGGTTGCAGGGTGGGGGTTGTTGTTAACTTTGTTTGTGGTTTTAGAGCTTGTACGGGGGTTATCTCGGGGGGCAATTCGGGCTGTA +>Emeus_crassus +ATGACTTATTTTGTTCTTTTTTTAGGGGTGTGTTTTATTTTGGGGGCTTTGGCAGTGGCATCTAATCCTTCTCCATACTACGGGGTACTTGGTTTGGTAGTGGGGTCTGTTGTGGGGTGCGGGTGGTTGTTGAGTTTAGGGGCCTCTTTTATCTCTCTGGTGTTGTTTTTGGTGTATTTGGGGGGAATACTGGTGGTCTTTGTGTACTCTGTGTCTTTGGCTGCTGATCCTTTTCCAGAGGCTTGAGGGGATTGGCGGGTTTTAGGGTTTGGTGCTAGTTTAGTTTTAGTGGTGTTTGGGGGATTGGTAGTGATGGGGTCGGTGGGCGTTACGGTGGGAGGTGTGGGTACTGTAGATTGTGGGGGTATGGTTTCTGTTCGTACGGATTTTAGTGGAGTAGCAATGCTTTATTCTTGGGGAGGGGGAATGCTCTTAGTTGCGGGTTGAGGACTGTTATTAACTTTATTCGTGGTGTTGGAGCTTGTACGGGGGGTATCTCGGGGGGCAATTCGAGCGGTG +>Eudromia_elegans +ATGACTTATTTTGTTTTTTTCTTAGGGGTAGGCCTTGTTATGGGGGCTTTGGCAGTGGCATGTAATCCGTCTCCGTATTATGGGGTATTAGGTTTGGTGTTGGGGTCCGTTATGGGGTGTGGATGGTTGGTGAGTTTAGGGGTGTCGTTTGTTTCATTGGTTTTGTTTTTAGTGTATTTAGGAGGAATGTTGGTGGTGTTTGTTTATTCAGTTTCTTTAGCCGCTGATCCTTATCCTGAGGCTTGGGGGGATTGACGGGTTGTTCAGTATGGGGTGGGGTTCATGATAATTGTTTTGGTAGGGGTGGTGTTAGGGGGTTTTGTGGAGGAGGGGGTGGTTGTTGGGGGGACGGTGGATAGTGTGGGGATGATATCAGTTCGCATGGATTTTAGTGGGGTAGCAATGTTTTATTTTTGAGGGGCGGGGTTGTTTATGGTGGTTGGGTGGGGATTGTTGTTGAGTTTGTTCGTGGTGTTGGAGCTTGTACGGGGGGTATCTCGGGGGGCTATTCGGGCAGTA +>Falco_peregrinus +ATGGTCATGACTTATTTTGTGTTTTTTCTAGGGGTGTGTTTTGTTTTTGGGGCGTTAGCGGTTGCATCTAATCCATCTCCATACTATGGAGTTGTTGGGTTGGTGTTGGGGTCTGTTGTTGGGTGTGGGTGGTTGATGAGTTTGGGGGTTTCTTTTATCTCGTTGGTGTTGTTTATGGTTTATTTGGGGGGAATGCTGGTTGTTTTTGTTTATTCTGTGGCACTGGCAGCAGATCCTTTTCCTGAGGCCTGGGGGAATTGACGGGTTGTGGGGTGTGGTGTGGGATTGATTTTATTGTTGTTTGTTGGGGCTGTGATTGGTGGTAGTGTTGGTTATTTAAGTCCCGGGGTGGGTACTGTTGATAGTGGGGGAGTGGTTTCTGTGCGGTTGGATTCTAGTGGGGTAGCGATGTTTTATTTTTATGGGGTTGGGATGTTTTTTATTGCTGGTTGGGGGTTATTGTTGACTTTGTTTGTGGTGTTGGAGCTTGTGCGGGGGTTGTCTCGTGGGGCAATTCGGGCGGTT +>Gallus_gallus +ATGACTTATTTTGTGATTTTTCTTGGGATTTGTTTTATGCTGGGGGTTTTAGCTGTGGCGTCTAATCCTTCGCCGTATTATGGGGTGGTGGGGTTGGTGGTAGCGTCTGTGATAGGATGTGGGTGGTTAGTGAGTTTGGGTGTTTCTTTTGTTTCCTTGGCGTTATTTTTGGTGTATTTAGGGGGGATGTTGGTGGTTTTTGTTTATTCTGTGTCATTAGCTGCGGATCCTTATCCTGAGGCTTGGGGGGATTGGCGGGTGGTGGGGTATGGGCTAGGTTTTGTCTTGGTGGTTTGAATGGGGGTGGTTCTGGGAGGGCTCGTTGATTTTTGAAAGGTGGGGGTGGTTACTGTTGATGGCGGGGGTGTGTCTTTTGCTCGGTTGGATTTTAGTGGAGTTGCGGTGTTTTATTCATGTGGGGTTGGGTTGTTTTTGGTGGCTGGGTGAGGTTTGTTGTTAGCTTTGTTTGTTGTACTAGAGCTTGTGCGTGGGTTGTCTCGGGGGGCAATTCGGGCGGTT +>Haematopus_ater +ATGACTTATTTTGTCTTTTTTTTGGGAGTATGTTTTGTGTTGGGGGGTTTGGCAGTTGCGTCTAATCCATCTCCTTATTATGGGGTAGTTGGCTTGGTGTTGGCTTCTGTTGCAGGATGTGGGTGGTTGTTGAGTTTGGGGATCTCTTTTGTGTCCTTGGTATTGTTCATGGTATATTTGGGTGGGATGTTGGTGGTTTTTGTGTACTCTGTGTCGCTAGCGGCAGATCCATTTCCAGAGGCTTGAGGAAGTTGGGGTGTTGTGGGTTATGGTTTTGGTCTTATTCTAGTACTTGTTGTAGGGGTGGTAGTCGGTGGGCTTGTTGGGTGCTGAAAGTTTGGGATTGTTACGGTTGACGGTGGGGGTATGTTTTCTGTGCGGTCGGATTTTAGTGGGGTGGCCATGTTTTATTCGTGCGGGGTTGGAATGTTTTTGGTGGCAGGGTGAGGATTGTTACTGACTTTGTTTGTTGTGTTGGAGTTGGTCCGAGGGTTATCTCGTGGGGCGATTCGAGCGGTT +>Pterocnemia_pennata +ATGACTTCGTATTTTGTCTTTTTTATAGGGTTGAGTTTTGTTTTAGGGGCGCTAGCTGTAGCGTCCAACCCTTCTCCTTATTATGGGCTTTTAGGGTTAGTGGTTGGATCGCTTGTTGGTTGTGGGTGGTTGTTGAGTTTGGGGGTCTCTTTTATTTCTTTAGTGTTATTTTTAGTTTATTTAGGGGGGATATTGGTGGTTTTTGTGTACTCTGTTTCTTTGGCCGCCGACCCTTTTCCTGAGGCTTGGGGGGACTGGCGAGTTTTGGGGTATAGTGGGGGGTTGTTACTGGTGATGCTTGTGGGAGTGGTAGTGGGAGGGGGAATGGGGAGTGAACTTTGGGGCATCAGTACTGTGGACTCGGAGGGGGCTGTACTGGTTCGGATAGATTTTAGTGGGGTGGCGGTATTTTATTCTTGGGGGGCCGGAATGTTTTTAATTGCCGGGTGGGGGCTGCTGTTGACTCTGTTTGTGGTATTGGAGCTTGTACGGGGGTTGTCTCGGGGGGCGATTCGGGCTGTT +>Rhea_americana +ATGACTTCATATTTTGTCTTTTTTATAGGGGTGAGTTTTATTCTAGGAGCACTAGCTGTAGCGTCCAACCCTTCCCCCTATTATGGGCTTTTAGGGTTGGTGGTTGGATCGCTTGTAGGGTGTGGGTGGCTATTGAGTTTAGGGGTCTCTTTTATCTCTTTAGTGCTGTTCCTGGTGTATTTAGGGGGGATGTTAGTGGTCTTTGTGTACTCTGTTTCTTTGGCCGCCGACCCTTTTCCCGAGGCTTGGGGGGACTGGCGGGTTTTGGGGTATAGCGGGGGGTTACTGTTGGTGGTGCTTGTAGGGGTGGTGGTGGGAGGGGGGATGGGGAGTGAACTTTGGGGGGTCAATACTGTAGACTCGGAGGGGGCTGTATTAGTCCGGATGGATTTTAGCGGGGTGGCGGTGTTCTATTCTTGGGGGGCCGGGCTGTTTTTGATCGCCGGGTGGGGGCTGTTGTTGACTTTGTTTGTAGTATTGGAGTTAGTGCGTGGATTATCTCGGGGGGCGATTCGGGCTGTT +>Smithornis_sharpei +ATGATATATTTTTTGTTGCTGTTGGGTATGTGTTTTGTTCTGGGAGGGTTGGCTGTTGCGTCTAATCCTTCGCCTTATTATGGGGTAGTTGGGTTGGTGATGGCGTCGGTGGTGGGGTGTGGGTGGTTGATGAGTTTGGGGCTGTCTTTTGTGTCTTTAGTGTTGTTTTTGGTTTATTTAGGTGGAATGTTAGTGGTGTTTGTGTATTCAGTGTCGTTGGCGGCGGATCCATTTCCGGAGGCTTGGGGGGATTGGCGGGTAATTGGTTATGGGTTGGGGTTGGTTTTAGTTTTGGGTGTAGGGGTGGTTGTTGGAGGGTTGTTGGGGGAATGGCAGTTGGGTGTTGAGACTGTGGATTGGGGGGGAGTGAATGCTGTGCGGTTAGATTTTGGGGGGGTGGCTATGCTTTATTCTTGGGGGGTTGGGCAGTTTATGGTTGCGGGTTGAGGGTTGTTGTTGACTTTGTTTGTTGTTTTGGAGCTTGTACGGGGGTTATCTCGAGGTACGATTCGGGCAGTG +>Struthio_camelus +ATGACCTACTTTGTTATGTTTTTGGGATTTTGTTTTATTTTGGGAGCGGTAGCGGTGGCGTCTAATCCGTCTCCCTATTATGGTGTACTTGGTTTGGTTGTTGGGTCTGTTGTTGGTTGTGGGTGGTTGTTGAGTTTGGGGGTGTCATTTATCTCTTTAGCATTATTTTTGGTTTATTTAGGGGGGATGTTGGTAGTATTTGTATACTCTGTATCATTGGCTGCTGATCCTTATCCTCAGGCCTGGGGGAGCTGGCAGGTGGTGATTTATGGGGTAGGGCTTGTTTTGGTTGTTTTAGTTGGTATTGTGGTGGGTGATTTTGTGGGGGTGTGGAATTTGTGGGTGGGGACTGTAGATTATGGGGGGCTTGGTGCTGTTCGGTTGGATTTTAGTGGGGTAGCTTTGTTTTATTCTTGGGGAGCTGGTTTGTTTTTGGTTGCGGGTTGGGGGCTGCTGTTAACTCTGTTTGTGGTCTTGGAGTTAGTGCGGGGGCTATCTCGGGGGGCAATTCGGGCAGTT +>Tinamus_major +ATGATATATTTTGTGTCTTTTTTAGGAGTTTGCTTTGTATTGGGTGCTCTGGCAGTGGCATCAAACCCATCGCCCCAGTATGGGGTGATGGGTTTGGTTATGGGTTCTGTGGTAGGGTGTGGTTGGTTGTTGAGTTTGGGGGTATCTTTTGTCTCATTGGTGCTGTTTTTAGTGTATTTAGGGGGAATGTTGGTGGTCTTTGTGTACTGTGTATCTCTGGCTGCGGAACCTTATGTTGAGGCTTGGGGGGATTGGCGGGTTTTAGGGTATGGGATGGGGTTTATGGTGGTAGTTCTTATGGGTGGGGTAGTTTGGGATCTTGTGGGGTCAGGGGGGTGATGGGTAGGTACGGTAGATTGTGTAGGGGGTGGTCTGGTTCGGGTAGATTTTAGTGGGGTGGCTATGTTTTATTCATGGGGGGCTGGAATGTTTATGGTAGCTGGATGGGGGTTGTTTTTGACGCTGTTTGTGGTGTTGGAGTTAGTGCGGGGTCTGTCATGTGGGGCAGTTCGGGCAGTT +>Vidua_chalybeata +ATGATAGAGTTCGTTTTATTTTTAGGACTACTTTTCGCTCTGGGGGGGCTGGCAGTAGCCTCCAACCCCTCTCCCTACTATGGGGTGGTAGGGCTGGTTGTTGCAGCTATCGCGGGGGGTGGTTGATTGGTAAGTTTAGGGGTTTCTTTTGTGTCTCTAATGCTGGTTATGGTTTATTTAGGTGGAATGCTGGTGGTGTTTGTTTATTCAGTGTCGCTGGCGGCGGATCCGTATCCGGAGACATGGACGGATTGAGGGGTTGTTGGTTATGGTTTTGGGATGGGTCTGGTTGTTATGGTAGGGCTTGTTGTGAGTGGTGTGTTTGGGCTTCTGGCTGATGTTGGTACGGTCAATGGTGCTGGGCTATTATCGGTTCGGGTGGATTTTAGCGGGGCGGCCGTTCTTTATTCGGAGGGAGCTGGGTTTCTTTTAATTGGGGGGTGGGGGCTGCTGTTAACTCTGTTTGTGGTGTTAGAGCTTGTGCGGGGTCTGTCTCGTGGGGCGATTCGGGCTGTT +>A_mississippiensis +ATGGGATTTACGTTGTTTCTTTGTTGTTTGATATTAGCATGTGCGATGATGGTGGCGGCAAGTTCAATAATTCATTTTGCCGTGGTAAGTTTACTTTTTGTAGTTGTATTCGGTAGTGGTTTGTTAATTATTGAGGGTGGAAGTTTTATGCCTTTAGTGGTGTTATTAGTTTATTTAGGGGGGTTATTGGTGGTGTTTGCTTTTTGTGTTGGGTTTACTGATGATCCATTTGGGGGGTTTTGAGGAGTGGGGGTGTCTAAGTGGGTCGTATTTTTTTGATGGGCGGGGTTCTTTCGTGGGGTTTATTCACGATATTGGCGTTTGTGGTGTTGGGGAAAGACTAGTGCGGGGGAGTTTTGGGGCGAGGTAGTTAGTAGTGAGTTGTTAGGGGTTAGTCAGATGTATTCTGATGGGTGGGCGTTCATTGTGGTGTGCGGGTGAGCTTTACTGGTGGTGTTATTCGTAATTACAGGGTTTGTTCGAGGGTATCGTCAGGGGGCGTTTCGCTCTTTT +>Caiman_crocodilus +ATGGAATTTACATTGTTTTTGGGTTGTTTGGTGTTGATGTGTGCGGTAATGGTTGGGGCAAATTCTGGGGTTCATTTTGCTGTGCTGAGTTTAGTTTTTATGGCTATGTTGGGTAGTGGTTTGGTGGTGATTGAGGGTGGGAGTTTTATGCCTTTAGTGGTGTTGTTGGTTTGTTTGGGGGGGTTGTTGGTTGTGTTTGCTTTTTGTGTGGGGTTTACTGATGATCCGTTTGGTGGGGTTGGGGTCTCTAAGGAGTTTGTGTTTTTTTGTTTGGTTGGGTTGGTCGTGGTGGTAGGTTGTGTGTGTGGGTACTTGCGAGATTGTTGGGTTGTTGGGGTGAGTGGAATGGTGGGTGTAGAAGTTGTTGGAAGTGGTGCAGCTAATGAGTTGTTGGGAGTTGGGTTGATGTATTCAAGTGGGTGGGGGTTTGTTTTGGTGTGTAGTTGGGCTTTGTTAGTTGCGTTGTTCGTGATTACGGGGATTGTTCGTGGTCATTGTTTAGGGTCGCTTCGTTCCTTC +>Alligator_sinensis +ATGGAGATTACGTTGTTTTTTTGTTGTTTTATACTAGTATGTGCGATAATGGTAGCGGCAAGTTCAATGATCCACTTTGCTGTAGTGAGCTTGCTTTTTGTGGCTGTGTTCGGTAGTGGTTTGGTAGTAGTTGAGGGTGGAAGTTTTATGCCCCTGGTGGTATTATTAATTTATCTGGGGGGCTTACTGGTGGTATTTGCTTTTTGTGTGGGGTTCACTGATGATCCTTTTATAGGGTTTTGAGGGGTGGGGGTATCCAAGGGGGCTGTGTTTCTTTATTGAGTGGGGTTGTTGATCGGGATCTGTTGTGCGTGGGGGTATTTGTGAGGGGGGATGTGGATTAGTGTGGGAGAGCCTTGGAGTGAGGTTGTGGTCGGTGAGTCATTAGGGGTCAGTGAGATGTATTGTAATGGGTGAGTATTTGTTGTGGTGTGTGGATGAGCCCTGCTAATTGTATTATTCGTAATCACGGGGCTCATTCGTGGCCATCGGCGAGGGGCATTTCGTTCTTTT +>Sphenodon_punctatus +ATGACTTATGCTATTTTTCTGTTTGGTCTTTGTTTCGTCTTTGGTTTGTTATTAGTGGCTTCTAATCCTTCGCCCTATTATGGGGTGTTAGGGCTTTTGATAGCTTCTGCTGTTGGTGGTGGATTTTTGGTTGGTGTTGGTAGTTCTTTTTTGTCTGTCATTTTGTTTTTGATTTATTCGGGTGGTATGTTAGTAGTGTTTGCTTATTCTGTTGCTTTGGCTGCCGATTTTTATCCTGAGGCTTGAGGCAGTCGTTCAGTTGCTGTTAATCTTGTGGTTTTTTTATCTTTGCTAGTTTTTGTTGGGTCTGGGTTTTCTTGGGGGTTAAGTAAAAAGGGGGTTGGGGAAGAGACAGTTGATTTTGGTGGTATTTCTTTGATTCGTGGGGATTTTGGGGGGGTTGCGATTTTGTATGATTTTGGGTGTTCTGTGCTTGTGGTTTCTGGTTGGGTGTTGTTAGTAGCTTTGTTTGTTGTTTTAGAGTTGACTCGGGGTCAGTCTCGTGGTTCCTTGCGGGCGGTC +>Pogona_vitticepes +ATGCACTTGGTTTTTTTTATTGCTTTGGGGTTTCTTTTGGGGGTTATTGGGGTTGCATCTAACCCCTCTCCTTGTTTTGGTGCGGGGGCATTAGTAATTGCTTCTGGGTTTGGGTGCGGTGTTTTGGCTGAGTTTGGTTATTCTTTTATTGCGTTAATTTTGTTTTTGGTTTACTTGGGGGGTATGTTGGTGGTATTTGCTTATTCAATTGCTCTTGCTTCGGATGTATATCCTCAGGCATGGGGTAATTATGTTGTTGGGTTGTCTAGTGTTGGGTATTTTTTGGTTGTTATGATAGTAGTGTGAATAGGGGGTGGTTACTTGGATTTTGGGGAAATGGGGGGCGGGTTAGTTTTTATGTTGGATTCTGGTTATGGTGGTATTTCTATGTTGTATTCGGTGGGGGGGTTTTGTCTTTTTTTCTTAGGGGTTGGATTGTTAATTACATTGTTTGTTGTGTTGGAGTTGGCTCGGGCTGGAGTGTCTATTGCCCGTAAATAT +>Sceloporus_occidentalis +ATGGTTTATTATATGTTTTTGATGTTTTTTTGTCTGATTGTGGGGCTAGCAGCTGTTGCTTCTAACCCTTCTCCTTATTTTGGGGCGGCGGGCTTAGTAATTTCTGCTGGAGTGGGGTGTGCAGTATTAGTTGGGTTTGGAAGTTCATTTGTGTCTTTGGTTTTGTTTTTGATTTATTTAGGGGGCATGTTAGTGGTTTTTGCTTATTCTGTTGCTTTGTCTTCGGACCCGTTTCCTGAGACTTGGGGGAGTTGGTCAGTAGGGGTGTACTTGTTTGGATATTTGGTGTCGGTTGTTGTGTTGTGGTTGGTAGTAGGTGTTGGTGATGTTAGTGAGTATGGGATGGTTGGTGTGGATGCTGTTGGGCTGTCCGTGTTGCGTGGGGATTTTTGTGGTGTTTCGTTATTGTATTCTATTGGTGGGGGTGGGCTGTTGGTTTGTGGGTGGGGTCTGTTGTTAACGCTATTTGTTGTATTAGAGCTAACTCGTGGTTTAGCTCGTGGTGGATTGCGTGTAGTC +>Iguana_iguana +ATGGCCTATTTTTTATTTATCTTGTTTTTTTGTTTGGTGGGGGGATTGATAGCGGTTGCTTCAAATCCGTCTCCGTATTTTGGGGCGGCAGGGCTGGTTGTTTCTGCGGCGGTTGGTTGTGGGGTGTTGGTTGGGTTTGGGGGGTCTTTTGTGTCGTTGGTCTTGTTTTTGATTTATTTAGGTGGGATGTTGGTAGTTTTTGCTTATTCTGTTGCTTTGGCTTCAGAGCCCTATCCTGAGACTTGGGGGAATCGGTCTGTTGGGTTGTATTTGGTGGGGTATTTGTTTTTGATTTTTGTTTTGTGGGGCTTGTTGGGGGGTGAGTGGGGGTTTAGTGGTTATGGGTTGGGGGGGGTGGATGCTGTGGGGATTTCTGTCTCGCGGAGTGATTTTGGTGGGGTGTCTTTGTTGTATTCTGTTGGTGGGGGGGCTTTGTTGATTTGTGGTTGAGGTTTGTTGTTGACGTTGTTTGTTGTTTTGGAGTTGACTCGTGGGTTGTCTCGTGGGAGTTTGCGGGTGGTT +>Eumeces_egregius +ATGGTTTATCTAATTTTTTTAATGTCTTTTTGTTTATTAGGGGGGCTAGTTGCTGTGGCGTCCAACCCCTCTCCGTATTATGGGGCAGCAGGGTTAGTGGTTTCTGCTGCTGTGGGGTGCGGGGTTTTGGTTTGGTTTGGCAACTCTTTTGTTTCTTTAGTGTTATTTTTGATTTATTTAGGGGGAATGTTAGTGGTGTTTGCTTATTCTGTTGCTTTGGCAGCAGACCCGTACCCGGAAACCTGGGGAAATTGGTCTGTTGGGTTATATTTTGTTGGCTATGTCCTGTTGGTTGTGGTGCTGGGGGCTGTATTTGGGGGTGGGGCGTTAGATGTGGGTATTGGTGTAGAGGGGGTGGATTCTGTGGGGCTGTTTTCGGTTCGCGCGGATTTTAGTGGCGTCTCTTTGTTATACTCTTGAGGGGGCTTCTGCTTATTGGTGTCTGGTTGGGGGCTATTATTGGCGTTGTTTGTTGCTTTAGAATTATCACGGGGGTTGGTTCGAGGGGGCCTTCGAGTTGTT +>Bipes_canaliculatus +ATGACGTATGTTGTTTATTTTTTAGGGGCGGCGCTTTTGTTGTCTGTTGTTGGGGTGGCGATTAACCCGGCGCCGCATTTTGCCGCGGGTGCGTTGGCTTTGGCTGCCTTGTTTGGTGGTGCCATTTTGGCGTGGTGTGGGGGGTTGTTTTTACCAGTAGTTCTTTTGTTGATTTATTTAGGAGGGATGTTAGTTGTATTTGCGTATGCTATTGCATTAGTTCCTGGTGAAACCCGTGGGGCGTATGGGCATTGACGTGCGTGGGCTGTGGTAGTGGGGGCTGTGTTTATTATGTTGTGTTTGGTTGAGCTTGCATTCGGGGTTCTTGATTGAGGGGGGTGTTGGGTGGGATCTTATGGGGCGGATGGTGTAAAAGTTGATTTATGTGGGGTTGGGGGGCTGTATACTTTTGGTATGTGGTGGCTGCTTTTGTGTGGTCTGTGTCTGTTTGTTTGCCTGTTTGTCGTACTAGGGCTGTCATTTGGAGGAAGCCGAGGGGGTGTTCGGCCGTTT +>Diplometopon_zarudnyi +ATGATATATTTAGTTTATTTATTAGGGGTTGCATTTTTGGTGTCGGTTTGTGGAGTAGCATCAAATCCTTTACCTCAGTATAGTGCTGGGATGCTTGTGTTGGCGGCAGCGTTTAGCTGTGCTACGTTGTCGTGAATTGGTGGGTCATTTGTATCACTTATTTTGTTATTAATTTATTTAGGGGGGATGCTAGTGGTATTTGCTTATTCTGTAACGCTTACATCTGGTTCGCATGTAGGGGCTTATGGTAATTGACCGGTGGGTGTGCGGTTATTTGTATTTTTATGTATAGTTTTGTATATGTTGGATATATGACTTAGTGATCGGGGTGTTGTTCAAGTTGACTCTGTTGGTCTTGGGGAGTTTAGTGGGCCAGTATTAGGGTTAGCGGATGTGCAGGTTGATTTGTTTGGTGTGCCATTATTGTACTGTTCTGGTAGTGTTGGGTTATTATTGTGTATTAGTTGTTTATTTATTTGTTTATTTGCTGTTCTTGGATTGACGCGTGGAGGACGGCGGGGTGGTATGCGGCCATTT +>Geocalamus_acutus +ATGGCGTATTTAATATATTTATTGGGTTTGATGTTTGTGGTTTCGATTATAGGGGTCGCTATACATCCGTTGCCTCAATTTGGGGCTGGGGGTTTGGTGGTGGCGACGTTGTTCAGCTGTGCTATGTTGGCTTTATTGGGTGGGTCTTTTATTTCAATTGTCTTGCTTTTAATTTATCTTGGGGGGATGTTAGTTGTGTTTGCTTATTCTGTGGCGCTGGCCGTAGATGCTTGCGAAATGGTCCGTGATAGTTGGGCTGTTGGAGTGCGGCTGTTTGTAGCGGTGTGTGTAATTATATGGTTCGGCGAATTATATACTACTTCTGGCAAATTTAGCTCATTGATGAATGGTATTGGTGATTTTTGCGAGGTTATACCGTTTCCAACAGAGGTGCAGACAGATGTGTGTGGTGTGCCAATATTATACGATGCCGGCTGGGTTGGTTTAATTTTATGTGTTATGTGCTTGTTTGTTTGTTTGTTTGTTGTTTTAGCAATTACGCGTGGGGTAGCATGTGGTGGGTTACGTGTGTTT +>Amphisbaena_schmidti +ATGTTGTATTCAGTTTATTTTTTAGGACTTGCGTTTATGGTTTCGGTTGTTGGTGTGTCTGTCAATCCTCTTCCTCAGTATGCGACGGGGGCGCTCGTACTGGCAGCGGGTTTTAGTTGTGCTAGTTTGGCATGAATTGGCGGGTCTTTTATATCTATTATTTTGTTTTTAATTTATTTAGGTGGCATGTTGGTGGTGTTTGCTTATTCAGTGGCATTATCTTCTGGGCCTTATTTAGTTAAGGGGGTTAGTTGGCCTGTTGGTATGCGGTTAGTTGGATTTTTATGTGTTATTTTGTATATGGTTGATGTGTGAGGGGTTGGTTATGGGAGTGGTTGGTATGATTATAAGGGGCTTGGGGAGTTTGGTGGGCCGGTGCTTGGGTGTGGGGAGGTTCAGGTTGATTTATGTGGTGTGTCATTATTGTATTCTTGAGGTGGGATTGGGTTATTTTTGTGTGTTTTTTGTTTGTTTATTTGTTTGTTTGTTGTTTTAGGGTTGACTCGTGGTGCTGGGCGTGGGGTTTCACGTCCGTTT +>Acrochordus_granulatus +ATAGAGTATATTAATTATTTGGCTATTGTTTTTATGGTTATTTTTGGGGTGATGTTAAGTGTGGTTTCGGTTTCTTATTATGGTGTTGTTGCTTTGATGGGTTTTGTATTTTTTTGTTGTGTTATTATAGTTTTTATAGGTCAGGTGTTTATTGCTTTAGTGATGTTTATTGTTTATTTGGGTGGTTTGGTTGTTGTTTTTGGTTATTGTGTGAGTTTAGAGAAAGATTTTGTAGGATTATTTAGTAATATATTATGGAAGTATGTGAGTTTAGTTGGTGCGTGTTTTGGGTTTATTATTAGTTTGTTAGTAGTTAGTTTGTTTGGATTTGATGGGTGGTTTGTAACTATGTGGCGTGGTAGTTGTGTTGATACCATGGTTAATGGTTTTAGTGTATTTTATGGTGATGGTGGGGTTGGATTGATTGTTTGTCTTTGGGGTTTGTTTATAACTTTGTTTTCTGTTCTTATTATTCTTGGTTGGTCAAAGAGTGTAAGTTTTCGGTCATTT +>Cylindrophis_ruffus +ATAGATTATGTTTTTTGTTTGATTATAATATTGATGGTTGTGGTAGCGGTAGTATTGGGGACGACGCCGGTGTCTTATTATGGGGTTATTGCTTTAATGGGGTTTGCGTTTTTGTGTTGTGTTTTTATGTGTTTTATTAGTCGTACTTTTGTTGCGCTAGTGACTTATATTGTGTATTTGGGGGGTTTGGTAGTTGTATTTAGTTACTGTATTAGTGTTGAGAAGGGTGTAGATAATGTTTTTAAGTTGTTTGTTTCTAAGATATTTGTATGTGTGTCTGTATTTGTTGCAGCCTTTTTTTATTTATGGATTGCGGTGGTTTTTGGGTTAGATGGGTGATTAGTTGTGATGGATCAGGATAGTTTTGCTTGTGTTGAGGTTAATGGTTTTGGAGTTCTTTATTTTAGTGGCGGGGCTGGGTTGATGGTTTGTGTGTGGGGTTTGCTTGTGACGTTATTTTCTATTTTAGTAATTTTAAGTTGACATCGTTTGGGGGGGTTGCGGTCTTTT +>Xenopeltis_unicolor +ATAGATTACGTTTATTGTCTGGTTGTTACATCAATGGTTGTTGGAGCTGTAGTTTTGGGTACTACTCCGGTTTCTTATTATGGGGTGATTTCTTTGATGGGATTAGTGTTTTTTTGTTGTGTTTTGATAGTTGGCATGGGTCGAACGTTTGTTGCTTTGGTGGCTTATATTGTGTATTTAGGAGGGCTGGTGGTAGTGTTTAGTTATTGTATTAGTGTAGAAAAGGATTTGGAGGATGTGTTTAAGGTTTATACTTCTAAGGTTTTTGTATTTTTGTTTATCTGTATTGGAGTTGTTGCTTGTTTGTGAGTGATATTGGTTTTAGGGTTAGGGGATTGATTGATTGGGTGTGGTCAGGATTGTTTTGTGAATGTTGAGGTTAATGGGTTTGGGGTTTTATATTTTGGTGGTGGTGTTGGTTTAATTGTATGTTCTTGAGGTTTGCTTGTAGCGTTGTTTTCTATTTTAGTAATTCTTAGTTGACATCGTTGAGGTGGGGTGCGGCCATTT +>Python_regius +ATGGATTATGTTTTTTGTTTAGCTATTACATGTGTGGTGGTTGGGGCGGTAGTGTTAAGTACAACTCCTGTTTCTTATTATGGGGTGATTGCTTTGATAGGCCTTGTGTTTTCTTGTTGTATTATGATAGTAGGCATAGGTCAGACGTTTGTTGCTTTGGTAACTTTTGTAGTGTACTTAGGTGGCTTGGTGGTGGTGTTTAGTTATTGTATTAGTGTTGAAAAGGATGTGGAGGATGTTTTGAAGGTTTTTACTTCTAAGATTATTGTTTCTTTGTTCGTTTGTGTTGGCGTTGTTGCTTGTTTGTGTGCTGTATTTATTTTTGGATTGGGGGAGTGGTTGGTTGTGTTGGGTCAGGATTGTTTTATTTGTGTGGAAGTTAATGGGTTTGGGGTGCTTTATTCTGGGGGTGGGGTTGGTTTAATGGTCTGTTCATGGGGTCTTCTTGTGGCGCTATTTTCTATTTTAATTGTTCTTAGTTGATATCGGTTAGGTGGGTTGCGACCTTTT +>Boa_constrictor +ATAGATTATTTTTTTTGTTTACTTATAATGTTTATGGTTGTTGGGGTTATGGTTTTGAGTATAACCCTGATTTCTTATCATGGGGTTATTTCTTTGATAGGGTTTGTGTTTCTTTGTTGTGTCTTTATGTCAATTATTGGTCGGACTTTTGTTGCCCTGGTTATGTATATTGTGTATTTAGGTGGGTTGATTGTTGTATTTAGTTATTGTATCAGTGTTGAGAAGGATCGGGGTGTTCAATCACCCGCTTCTAATTTTTTTATATATTTTTTTGTTTGTGCTGGGGTTGTTGTTTATTTGTGGATTGTTTCGTTTTTGGGTGTTGGAGGTTGATTGGTTGAGGTTAATCAGGACTGTTTTGTTTGTATTGGTGTCAATGGTTTTGGGGTTCTTTATTCTAGTGGTGGTTTTGGTTTGATTGTTTGTTCTTGAATTTTGTTTATTACTTTGTTTTCAATTTTGGTGATTTTGAGTTGGTATCGTCGTGGAGGCTTGCGATCTTTT +>Ovophis_okinavensis +ATGTTTTTTGTAGAGTACCTGCTTTATTTTATTTTGGCTTTGGTGTTTTTTGGTGTTGTAATTTTGAGTTTTGCTGTTGTACCTTATCAGGGAGTTATTTCTTTAATAGGTGTTTCCTTTTTTTGTTGTGTTGCTATGATTTTAATGGGTCGCACTTATGCGGCGTTAGTGATGTATATTGTATATTTGGGGGGGTTAGTTGTAGTTTTTGGTTATTGTGTGAGTGTGGAAAAGGGGGGTGAAGTTGCTGGTGGGGGTGTTTGATGTCTTTTTGTGTTTGTGGTTGTTGGGGTGGTGGTGTGTGTGTCAATACTGGTTGTTGGAGGGGGGGGACAGGGTTTGTTGATTTATTCGGGGTGAGAGGACTGGGTGTGCTTAGAAGTGAATGGTTATGGTGTTTTTTATTGTGGGGGGGGGATGGGTTTAGTGGTGTGTGCTTGGGGTCTGGTTGTAGCTTTGTTTTCTGTTTTAGTGATTTTAAGTTGGACTCGCTTAGGTGGGTTTCGCCCTTTT +>Teratoscincus_keyserlingii +ATGGTTTATATTCTGTTTTTGTCTACAATGTGTTTGATTTTAGGTATTGCAGGGGTTGCATCCAATCCTTCGCCGTTTTATGGGGCTGTGGGGTTAGTGGTGGCTGCGGCTAGTGGGGCTAGTATTTTGGTTATGTTAGGGGGCTCTTTTTTAGCGGTTGTGCTTTTTTTAATTTATTTAGGGGGGATGTTGGTTGTATTTGCTTATTCTGTTGCGCTGTCTGCGGAGCCCTACCCGGAGACGTGGGGGGACCCGTTTGTGTTGTATCGTGTTTGAGGCTGTGTTGTTTTGGTTTTTGTGTTTTTTTGGGGTTTTGGGGGGCTCACTGGGTTAGAGGGGTGAGGTTTGGAGGTTGCGGGGGGCAAGTGAGAGAGTCCTCCGATAGACTTTAGTGGAGTTGTTCGGTTATATTTGGATGGGGGGTGTCTGTTATTTTTTTGTGGGTGAGTTTTAATTTTAGCCTTGTTTGTTGTGTTGGAATTAACGCGGGGGCTCTCACGGGGGAGTTTGCGTGCTATT +>Shinisaurus_crocodilurus +ATGTCATATTTTGTTTGTATATTGTTTGTTGGGTTGGTGGGGGGTTTAGTACTTGTGGCGTCTAATCCGTCACCGTATTTTGGTGCTGCTTCGTTAGTATTTGCGGGGGCAGTAGGGTGTGGTATTTTAGTTGGGATTGGAGGCTCTTTTGTAGCTTTGGTTTTGTTTTTGATTTATTTGGGGGGTATGTTAGTGGTTTTTGCTTATTCAATTGCTTTAGCTTCAGAACCTTATCCTGAAACCTGGGGGAATTTATCTGTCGGGTTTTATTCTATGGGTTATTTTGTTCTTGTTGTTGGGGCTGGTTGGGTCCTAGGTGGAATGTGAAGTTTTAATGGGTTTGGGTTGATAGTTGGTGATTCTTGTGGACTTGGGGGGGTACGTAATGATTTTGTAGGGGTTTCGTTGATTTATTCTAGTGGGGGTTTAGATTTGTTGCTCTCTGGTTGAGGTTTAATGTTAACTTTGTTTGTGGTATTGGAACTAACTCGTGGGCTTTCTCGTGGTGGTCTTCGTTCTGTT +>Bipes_biporus +ATGACGTACGTCGTTTATTTTTTAGGAGTGGGTCTTTTGTTGGCTGTTATTGGGGTGGCGGTTAATCCTGCGCCGTATTTTGCTGCTGGTGCGCTGGCGGTGGCGGCTTTGTTTGGCAGTGCGATTTTGGTGTGATGTGGTGGACTATTTTTGCCAGTGGTTCTTTTATTGATCTATTTGGGTGGGATGTTGGTTGTGTTTGCATATGCTATTGCACTTGTGCCGGGTGAGCGGGCGGGGGTGTACGGAGGGTGACAGGTATGGGCGTGTGTGTCGGGGTTGGTGTTTGTTGTGTTTTGTTTGGTTGAGTTAATGATTGGGGTGATTGATTGGGGGGGGTATTGTATTAATGGGGGTTTTGGGGTAATTGGTTTGCAGGTTGATTTAGGCGGGGTTGGAGGGTTATATACATTTGGTGCGTGGTGGCTGTGCATGTGTGGTGTTTGTTTGTTCGTATGTTTGTTTGTGGTGTTAGGTCTTTCGTTTGGTGGAGGACGTGGAGCTGTTCGGCCATTC +>Bipes_tridactylus +ATGATATATATTACTTATCTTTTGGGGTGGGCATTTTTGATAGCTATTGTTGGTGTTGCGATTAATCCACTTCCGCATTTTGCTACTGGTGCTTTGGCGGTGGCTGCTGTATTTGGGGCTGCAGTATTGGTGTGATGTGGAGGGTTGTTTTTACCCGTGGTTCTGCTGTTGATTTATCTTGGTGGTATGTTAGTTGTGTTTGCTTATGCTATTGCACTGGTTCCGGGAGAGCGGGCGGAACAGTATGGGGGGTGAGGTAGTTGAGTATGGGTGTTTGTTTTATTGTTCGCCGGGTTTTGCTTAGTGGAATGGTTGTTTGGGGGGAATGTTTCTAATTTTGGTGGGGGAGCTAGTATGTTGCGGCCTCAGGTTGATATGTGTGGTGTTGGTGGATTATATAGTTTTGGTGTGTTATGGTTGTTAGTCTGTGGTGTGTGTTTGTTTATTTGTCTTTTTGTGGTATTATGGTTATCTTTAGGTGGGGAACGGGGCGCTATTCGGGTATTT +>Dinodon_semicarinatus +ATGAATTATTTTTTTAGTTTAGTTTTGGTGTTTTTAGTTTTGAGTGTTGTGGTTTTAGGTGTAGTTTCTGCCCCATATCAAGGGGTTGTTGCTTTAATGGGCGTTTCTTTTTTTTGCTGTATTTTTATAGTTTTTTTAGGTCGTACGTTTGCGGCTTTGGTGATGTACATTGTATATCTTGGGGGGTTAGTTGTAGTTTTTGGGTATTGTGTTAGTGTTGAGAAGGAAAGTGGTATTTATAGTGTTGGTGGGACTAAGTATTTTATTGTTTGTGTATCCTTGTTGCTTGTTGTTTTATTATGTTTGTTGCGTGAGGTGGGGGGTTTATTGGTGTATGTTAATTGAGGGGATTTAGTGTGTTTGGAGATGAATGGGGTAGGTGTTTTTTATTTTAGTGGTGGGTGGGGTTTGATTGTGTGTTCTTGAGGGTTGCTTGTTGTATTGTTTTCTATTTTAGTTATTTTGAGTTGGTCTCGATTGGGTGGTTTGCGGCCTTTT +>Cordylus_warreni +ATGACGTATGTTTCTATTTTTTTAGGGCTTTGTTTTATTGTTGGGGTTGTTTCTGTGGCTTCTAATCCGGCCCCGTATTATGGTGTGGTTGGGTTGGTTTGGTCCGCTTTGGTTGGTTGTTGTGTCTTAGTTCTTTCTGGGGTGTCTTTTCTTTCTTTAGTGTTGTTTATAATTTATTTGGGTGGGATATTGGTTGTGTTTGCATATTCAGTGGCTCTTGCATCAGAGCCCTATCCGGAGACATGGGGTAATTTTGGTGTTATAGTGCATTTTCTTGGTGGGATGGGGTTAGTTTTTGTCTTAGCGTGGTGGTACTTAGAGGGTTTTAATTTTGATGGTTTGGGTGCAGTTGAGGTGTTAGGGTTATCTATAGTTCGTGTAGACCTGGGGGGTTCGGTAATATTATACTCTTGGGGTGGGTGGTGTTTGTGGCTTTGTGGGGTGAGCTTGTTATTAGCACTGTTTGTTGTGTTGGAGGTGGCTAGTGGGGGTCGTCGTGGGGGTCTGCGTGAGATT +>Abronia_graminea +ATGTCTTATTTGATTTATATCTTTTTTCTGTGCTTAATGTTGGCTTTAATTTGAGTGGCTACTAATCCTTCTCCTTATTTTGGTGCTGCCGGATTAGTGGGTTCTTCAGTAGTTGGATGTGGTGTTTTGGTGGGGGTAGGGTATTCGTTCGTTTCTTTGGTGTTATTTTTGATTTATTTAGGGGGGATGTTAGTGGTGTTTGCTTATACAGTAAGTTTGGCGTCAGAGCCTTATCCAGAAGCGGTGGGGGATTCTGCTGGTTATTTTTGAAGTTATTTTGGTTTGTTTGTAATAATGGGTATGTTGATGATTATGGAGGGTACTGTTGGGTTAGACTATGATGTTCGTACTTTACCTGGAATGTCTTTGGTAAATGTTGATTTTGTTGGGGTTTCTTTGTTGTATTCTTGAGGTGGGTTTGATCTTTTAGTTTGTGGTTGAGGTTTGTTGTTGGTTTTGTTTGTGGTTTTGGAGTTAACTCGTGGATTACATCGAAGCGGATTACGCTCTGTT +>Leptotyphlops_dulcis +ATGACTTATCTTATGTTTATTGTTTGTTTGTTGGTTTTTTATGGGTTTTTGGGTCTTTGTTTGTGCGTGTATCCTGAGGATGGGGTTGTTTGGTTGGTGTTTTGTTTTGTTTTGGGTAGTTTTATGTTGGGGGTTATTGGGGTGTCATTTGTGGCTTTGATGTTGTTTATTGTTTATGTTGGTGGAATGATGGTGGTTTTTGCTTATTCTGTGGCTGTAACATCTGAGGTGGGGGTAAAGGTGGGCCGTTGGGTTCGTAAGGTAGTATCTTTCTGTTTTGGTGTAGTTGCTTTTTGTTTTGGTTTTTATGTGGTGGGTGGGCTTAGTTTTTTGTTCCGGGTGGGTTTACTTTTTGATGGTTCTGTTAGTTCGGATTTTGATGGGGTTTCTTTGTTTTATTCTGATGGGGCGTTTTGTTTATTAATTTGTGGGTGGGGTTTATTCTTGGTGTTGTTTGTTGTGCTTGAGTTGGTTCGTGGTGGGTTTCGTGGGGCTTTGCGAGCGGTT diff --git a/example_files/pxbdfit_example/bd.tre b/example_files/pxbdfit_example/bd.tre new file mode 100644 index 0000000..d493d9b --- /dev/null +++ b/example_files/pxbdfit_example/bd.tre @@ -0,0 +1 @@ +(((((s19:8.919229497,s21:8.919229494):19.95224961,(((s28:1.946092244,(s29:1.087576191,(s30:0.892917128,s31:0.892917128):0.1946590628):0.8585160526):8.3971209,s32:10.34321315):11.09543257,((s33:7.226304805,((s34:2.670349682,s35:2.670349682):2.222933978,s36:4.89328366):2.333021145):7.192871235,((s38:0.6421928454,s39:0.6421928454):0.0263742241,s40:0.6685670695):13.75060897):7.019469682):7.432833389):9.421849134,(((s46:12.20104112,s49:12.20104112):6.604755154,(s51:5.415238384,s52:5.415238384):13.39055789):7.973707395,s56:26.77950367):11.51382458):38.80946142,(((((s87:3.690843889,s88:3.690843889):11.45073371,(((s90:4.720117293,(s91:3.997568422,s92:3.997568422):0.722548871):1.54594792,(s93:2.198184551,s94:2.198184551):4.067880663):0.4042469457,s95:6.670312157):8.47126544):12.39306906,((s98:5.074415446,s100:5.074415446):14.97270317,s104:20.04711862):7.487528037):20.7336537,s126:48.26830035):16.54193839,((((s133:19.19452408,(s135:5.458627874,(s136:0.5006869268,s137:0.5006869268):4.957940945):13.73589621):8.335064656,s140:27.52958874):2.286174247,((s151:16.86265353,((s153:3.929431493,s154:3.929431493):0.5895208589,(s155:4.477463366,(s156:2.7123332,s157:2.7123332):1.765130166):0.04148898642):12.34370117):11.43773361,s162:28.30038714):1.515375849):2.627722159,((s169:7.840935141,s170:7.840935141):7.594637575,(s172:13.32986006,(s173:6.721414978,((s174:0.3080707103,s175:0.3080707103):4.107433663,s177:4.415504373):2.305910603):6.608445087):2.105712657):17.00791243):32.3667536):12.29255092):22.89721033,((((((((s213:0.2029741842,s214:0.2029741842):12.71610281,((s216:5.616429623,(s218:3.713394097,s219:3.713394097):1.903035527):3.114968709,(s221:4.941089359,s222:4.941089361):3.790308973):4.187678662):2.781171964,s224:15.70024896):8.113641143,(s228:16.40398772,s229:16.40398772):7.409902377):20.19393189,(((s235:1.164761961,s237:1.164761961):30.92897799,(((s239:11.80920341,(s240:1.145193454,s241:1.145193454):10.66400996):6.476060724,(s243:5.366328664,s244:5.366328664):12.91893548):0.5879546054,((s246:1.021385454,s247:1.021385454):2.278992972,s248:3.300378425):15.57284032):13.22052121):1.942298314,((((s252:0.8909838051,s253:0.8909838051):1.446077873,(s254:0.5364767172,s255:0.5364767172):1.800584961):0.5351456596,s256:2.872207338):1.872321111,s257:4.744528449):29.29150981):9.971783723):17.83929796,(s266:27.92939399,(s268:4.234731747,s269:4.234731747):23.69466224):33.91772596):17.52852757,(((((((s283:0.4995078195,s284:0.4995078195):2.376658579,s285:2.876166399):13.2757501,s286:16.15191649):14.55523323,(s288:9.130600983,(s289:5.339503764,s290:5.339503764):3.791097218):21.57654874):2.471388135,((s292:0.1094902985,s293:0.1094902985):21.11008484,s296:21.21957514):11.95896272):12.97210001,s307:46.15063787):9.351516506,(s325:1.575825061,s326:1.575825061):53.92632932):23.87349314):10.77139891,(((s340:9.940550523,s341:9.940550523):21.02957737,((s345:9.069122675,s347:9.069122677):1.968266562,(s348:7.197873819,s350:7.197873819):3.839515418):19.93273866):45.33019168,(s381:4.52614792,s382:4.52614792):71.77417166):13.84672685):9.852953562); diff --git a/example_files/pxboot_example/Alignment b/example_files/pxboot_example/Alignment new file mode 100644 index 0000000..ad64086 --- /dev/null +++ b/example_files/pxboot_example/Alignment @@ -0,0 +1,16 @@ +>Sequence1 +AAATTTCCCTTTCCCTTTAAAAATTTCCCTTTCCCTTTAAAAAATTTCCCTTTCCCTTTAAAAATTTCCCTTTCCCTTTAAA +>Sequence2 +GGGGGGGGGGCCCCCCCCCCGGGGGGGGGGCCCCCCCCCCAGGGGGGGGGGCCCCCCCCCCGGGGGGGGGGCCCCCCCCCCA +>Sequence3 +CCCCCCCCCCCCAAAAAAAACCCCCCCCCCCCAAAAAAAAACCCCCCCCCCCCAAAAAAAACCCCCCCCCCCCAAAAAAAAA +>Sequence4 +TTTTTTTTCCCCCCCGGGGGNNNNNNNNNNNNNNNNNNNNNTTTTTTTTCCCCCCCGGGGGNNNNNNNNNNNNNNNNNNNNN +>Sequence9 +NNNNNNNNNNNNNNNNNNNNAAATTTCCCTTTCCCTTTAAANNNNNNNNNNNNNNNNNNNNAAATTTCCCTTTCCCTTTAAA +>Sequence10 +NNNNNNNNNNNNNNNNNNNNGGGGGGGGGGCCCCCCCCCCANNNNNNNNNNNNNNNNNNNNGGGGGGGGGGCCCCCCCCCCA +>Sequence11 +NNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCAAAAAAAAANNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCAAAAAAAAA +>Sequence8 +NNNNNNNNNNNNNNNNNNNNTTTTTTTTCCCCCCCGGGGGANNNNNNNNNNNNNNNNNNNNTTTTTTTTCCCCCCCGGGGGA diff --git a/example_files/pxboot_example/parts b/example_files/pxboot_example/parts new file mode 100644 index 0000000..bd59418 --- /dev/null +++ b/example_files/pxboot_example/parts @@ -0,0 +1,4 @@ +DNA, gene0 = 1-20 +DNA, gene1 = 21-41 +DNA, gene2 = 42-61 +DNA, gene3 = 62-82 diff --git a/example_files/pxbp_example/Tree.tre b/example_files/pxbp_example/Tree.tre new file mode 100644 index 0000000..a5c98e4 --- /dev/null +++ b/example_files/pxbp_example/Tree.tre @@ -0,0 +1 @@ +((((s1:0.3603553431,s2:0.3603553431):0.8968782862,s3:1.257233629):0.4207546592,(((s4:0.1190332191,s5:0.1190332191):0.02544171746,s6:0.1444749366):0.7647640019,s7:0.9092389385):0.76874935):0.06349158892,((s8:0.3106889265,s9:0.3106889265):0.1031508249,s10:0.4138397514):1.327640126); diff --git a/example_files/pxbp_example/bp_output b/example_files/pxbp_example/bp_output new file mode 100644 index 0000000..d92d4a1 --- /dev/null +++ b/example_files/pxbp_example/bp_output @@ -0,0 +1,11 @@ +1 trees +8 unique clades found +s1 s2 1 +s1 s2 s3 1 +s4 s5 1 +s4 s5 s6 1 +s4 s5 s6 s7 1 +s1 s2 s3 s4 s5 s6 s7 1 +s8 s9 1 +s8 s9 s10 1 +TSCA: 0 diff --git a/example_files/pxbpseq_example/Sequences.fa b/example_files/pxbpseq_example/Sequences.fa new file mode 100644 index 0000000..46db593 --- /dev/null +++ b/example_files/pxbpseq_example/Sequences.fa @@ -0,0 +1,20 @@ +>s10 +TCTAACCGACCTTGGCGGTCTACATAGTCAGTTGCGCACTGTTCCGCGTTTGAAAATATTAGAATAGCGGTGAATCGGGGAAGTACGTTTCGCACCTGCCCCCGGAGCCTCGACCTTCCCCTGACCCCAAGTGCTACTAAGTGATTCCCTCTGTGCTTAACCGAACCACAAGCACTAGGGGCTTTGTGGTTGTAACCGTCACAACCTAGTCTACACGTATCTTACCACTACTTAAATGCTCGCCTACTACGCCTATTATCTCCCGCTCTTCCGCCGCCCGGTAGCCGTAAAGCTTTGTTGGCCGAATATTTCGACAAAGTTGACCGCAGTAGCATAGCTTGTAGAAACAAATACTGCACACATTGTTGACCACGTCGTGGATGGACAGTTTTCTGATCTTGTGAGGGATAAGTGAAGCAATTCCCGGTACACTGCTGGTTCCGGGCGTAAACACAATTAGGACCATGAGGACACAATCTCTCGAGGCTAGCATTGTCAAAACAGTTCGTTGATCTCGCAAATCCCAGAGCTGTGGAAAATGGGTTATATGTTTACGGGTCAGAGAGGGGAGGGTACCGACATTTATATATCTCGACTATGTTCAGCTAGATCACCTCATCCTACCATGGCCTCAACCTGTTCGGTAACTCTAGGGCGGCTGAATTCAGCTATAAGTAATTATAGCACGCCACTTTCTTCCGATCCAATCGTGGACCGCTCAATAGGGAATCTTTACAATTGCTGACGATAGTAGTAGTTCACCGGCCCGTCTTCTGTCCCGAATATCTGAACACTGAGGCCTAGGCCGCGAATCTAGAATTGTATCCCATCTTCAGGTTCGTAACTCTCAAGCCCGTGCCTGGGCTTAGGAAGCTTCGAAACATGGAGACTCTCAGGCTAGCCAACAGAAGATCTTATAGGCTAATGGTAGACATTCAGAACCTGTTAAGCAATTGCTGTGAGCATGCAACAGGCGTGCGATCTACACGAATAGCGAGCC +>s9 +CGTCAGCGACCGCTGCTGCCTACATAATCGCTACTGTAATTGGACGCGCTTCGAAATATTCGATTGGAGGCGAAACCGCGAGGATGATTTCGCCAATGGATAACTGGCCGCCACAGCCCGATCTCCCCTCCAGGCTGTAAGGCCTCCCCTAGTTTCAGTAACGCAGGCAAAGCGGTTTCGACCAGATGGACCCAACGGGCACCGCAGATTCTACACTGCTAGCATCAGTCCAGAAGCGCACCCCGGCTTAGACGAAAACCCCCCCACATCGGCCATTCCGGAACCCGGATATCTTTTCTCGCGGATAATTGCGGTATAGGCCAGTCGAAACCAATCGTATGTTTAAACACCACCTCAGCACAGCTATGGTGACGACCTGGTTGGAAAGTGGTTGTATCTACCGACGGAGGCGTAAAGCTTCTACAGATCATCTACACGTGCCCTGAGTGGACATCGTTCGTAATATGGCACTAAAGTATGTCGATGCGACCTTCTTAAATAGCGACAGTCGATGAAGGGAGAGCGTAGCCCATGTAAAGGGCCTTATACGTTCATCAACTGTTGCGGCCTGGATGTATAAAGTTATCAATCTCCCCGATGTATTGCTATATGTCCCATAACCACCGTTTGTTAACCGTGGTTGGAAAGCTTAGGGGCGCTGTGTTCAGCGTTAAATAACTATGACACTCCGTTACCCTTCATTCGAAAGGTGCACGGCTAAGCTGGGCTTTCGTCAATTCTCAGACGATAGAAGTCCCCGACCGTGCCCTTTTGGACGCCTAGCACGTCAACAAAATGTACTGGCGAAACACGGTATAATTCTTTTTGACAGTCGTTGTCCTCTCTGTATTATCCAAGTATAGCCTTATGACGAGTAGATCCAATTTAACGATTCACCTAGCAAACAGAAGAGGAATTACACCCACATTGAACTTGCAGGCCGTGTTAAGACACGATAGGAAAAATGCAAAGTATGACGAATAACTTATAGTGCGGCTCC +>s8 +CCGCACCGACGCTTGCCTACTGCATAGTCGTTTCTATTTCAGGATGTGTATTGAAGTATTAGATTCGTGGTGAAAAAACGTGGGTGATTTCGCGATGGTCTACCTGTCGGCAGCCGCGCCGAAACCTTTGCCGTGTCTGAGCGCCTCTCGTGGTTTACTACCGTTAGATTAGCACCTTAGACCACATGGCCGCAAAGCGCACAGCACACTCTACACATCTATGTATCATACATGATCGCACGTGGGCTCAGTCCATAATCCTCCCAACTTCTGCACCGCGGGACCTAAGTTCCTTACGTTGCCAATAAATCCAAGGTATTCGGCGGAAAAGCCATTAGTTGTTGAAACACCAACTCGTCCCAGCAATGAAGACGACCTGGTCTGAGAGAGTATGTATCTTGGGACGGCAGAGTCAAGCAACTCCAGCTGTTGTGACAGTGCTCTGAGTGGATTTCGGTCTTAAGCTGTCACCATAGTCCCTGGAGGCAAGGTAATTCGAAAGTGACCGACGGTTTCGGGCGGCTGAGGCCCATGACGAAAGGCTTTTAAGTTCACAGACCCACGCTGCGTGTTTATAGAGAGGTAGGTCCCTCCCCGGTTTATCCTTTGAACTCCTGAACCGAAAGGTTGTTCAACGGGTTGTGAAAGATCAGGGCCTGTACTATCTGCGTAAAATCATCATAGCACGCTCCTTTCCACCGTTGGAAACGGGCATCGCTCGCCCAGACTTTGGTCCATTCCCAGAAGAAAGCAGTTGCCGACTGTGCCCTTCTCGGCGCCTCACACATCATCTATCATTACTAGCGAGCCAATGTAGGATTTTATATGATTGACGATCTTGCCACTGTAAGACCCCAGCCGGGCCATAAGAAGTGTCGAAACAAACACCCGATTATGCACGCGAAAACGAGAGGAGTTGCAGGCACAGTAAGCATGAAGACCGTATGAAAACACTACAATTTACCTGTAAGATAAGTCCGAGAAATTAGATTAACGTGGC +>s7 +AGGCCGGCATTAATCCTGTCATATAGCCACTTGAATTGGGGAGTCTATCGATAGAAAATTATGCGAAATCAACCAGGACATCGTGTGAGGGTGTGAGCCACTGGCAGCGACTTAAAGGACTAGTGACAGCAAATGCGGGTAATGAAGCACGTCCACCGGCCAGTTTCGTTGATATACAGGCATGGAGTAGACAGTTACATCCGAATGCATAGCGTGTGTAGCCTGTCTGACGCTGACGAAAACCAATTCTGGTACGAACGCGGTCACTTCCTAGTAATAGTAAGCCGCCAATCTCCGTCAGCAACTAATTATACAGATGCGACCTTATCAGGAGGGAGGTAGGCTACTGCGAGCAAACATTTTGCGGGCAGCCTGCGCTACTCCGTAGAGTAATGACTATGGGTGAGTCTCGAGTGTACGCGCTGTTGACCTCCGCACTTGAACACCGTTGTTTATTTTTGTATGGCAAGTTTTGTGTAATAACTACTACTACTATAGAAGCTTTGTTTGGTTGGACATCCCTTACAACGGCCACACTCCGTATGACTCAGACCATGTGATGTAGCTGCCTACAGTATCGCTATTCAGTATCACTGGTTGTGCAAACGCTGCGTGAATACCCCCCATCACCAACCCAAGGTAGGAGATGCACCTATCCGTTTTGCTCTGTAAAGCAAAATAACCTATACTAGTCAGATTATCCGTGCACTGCTACCTCATTGCAAGGAAGCTAGCCGCGTGAATATCTCTAGGTCGTTCTGTTTTTTTTAATGTCCGCGGTGAGAGTTGACTGAGACCCTTCATTACGTTCACAAAGCTGACAACCCACCGAAGGGATGAAGACACAAGCGCCCGTAGACAGTCCATTTCCGCTCCTCTAATCGTCTCCATTGTAACTGGGCTACTAGGTCTTGGTTGAAGGGCGCGATATTAAAGGGATTTACGGCTAATCACCACATAAGTGCCAAGACATGGGAGTTGATGGTGACTCCCGGTACAC +>s6 +CGTTCTCTATGTTAACTGAACTCTCGAATACTCTGTAGGTGACATGCTCAGTTGGGACTAGGAATACGGATAACTCTAACACATCGCGTCCCAAGCGTCGGAGGAATCACACTAGATGCGTAGCGTGTTCACGTGTGGGAGCTTTGATTTCGACCGCTAGGAGAGAAATTTAACGTTAGGTTGCGTACTGCAGCGCCTTTGTGCACCGCGGCTCTTGTAACGAGGCTTAACCGCAGCAATCGGAGCATCCTCGCCTCAGTGTCTCCTCTTACGTATGGGTCCGGGAACCTGGAAGACTCCAATTATGCGGTGCTCAATCCAACAGCTCCCTCCGATGTCTCGTACGCAATTTGGGCACATAGATCGTCTTCTTATCCCAGGCGTAGAAGCTTTGTAGTGTGAGGGGTTCTAGTGTGAGCAGGATATTGAGATCGCATTATGGCCCGCGCCATCCTGTAAGAAATGGATATTTGCAGTATACTGGTATGTCCCCACCGATGGGCCGCTTAACGCTTTCTTTCTATAGAGCCAAGTCTGGACTAGGGCCCCAGTCCTATTCTTCTAACAGTCATAGACACATCCCAGAGGAGCGCCCTCTTCCCTTATTTGCTTCACTATAGGTACGTCTGACAATCTAAATGTTAAGGGTTGGCAATTGCCAACCTCCCTTAGAAGCACCATTGTGGGCCGTTGAAAATTAGGTATTCTCCTAATACATTTACTGTCAGAATTGACCCCACTAAACTACTTCTACTAGTGATGATGGACGCCGCTTGGACCTGAATGGGTAACTGGGTAATATCGAAGGTGCATGGCGCCAGCGAACCCGCTCCAGTGTGAATCTAAATCCTCGCGGAGTCTTCCCAAAGTATCACGTCTCTAACCTTACTGCAACGGTGTATGGTACGGCTTCGTATGTATCGGTGATGACCTTTGGAGCGAACTGCGCTTTGACGGGCTCCCCAATCCTACAGGATCTGGGCTGTCCTTATCAATCCGA +>s5 +CGTTCTTTATGCACGCGAACCGCTCGAATACTCTGTCGGTGATAAACCCAGTTGTCACGTGGGATACGGATAATAATCACGCGTCTAGGCCCAAGCGTCGGAGGCATCACAGTCGATGGGTAGCGAGTTGACGTGGTGATGCTACGATTAAGACCGCGAGGAGAGAAATTCAAAGTTAGCTTGCGTGCTGCAGCGCCTTTGTGTACCGTGGCTCTCGCTAAGAGGCTTAAATGCTGCTTTCGCAGCAACCTGGACCCAGCCTTTCCTCTTACGAATGAGTCCGGTAGCCTGGAACCCTCCAATTCTGCGATGACCAATGCGACAGCTCTGTCCGGTGTCTCGGACCCATTTTGCGAACATTGATTGTCTTCTTATCGCAGGCGTAGAAGCTCGCTAGTGTGAGGGCTTCCCGTGGGCGCTGGATATTGTGGTGGGATTATGGCACGGGCCACAATGTAGGATATATATAGTTGCAATCAATTACTATGTCCCCTCACATGGGACGTTTAACAGCTTTTTTCTCTACACCGACGCCTGCTCTAGGGCCCTAGTCCGCTTCTTGTAAGCGTCGTAGACATATCCCTGGGGAGCGCACTCTTTCCTTATTTGCTTCACGATAGGTACCTCTGTCAAGCGAAAAGTTAGGGGTTGTCTATAGTCACCCTCCCCTGGAACCCACCTCGTGGCCCGTCGAAGATTAGGTATACTCGTAATACATATCCTGTCAGAATTGACAGTAAACTATTACTGCTACTAGTGCTGATGGACGGCGCTGATCCCTGAAAAAGTAACTGGGTGATATCTAAGATCGATAGCGCCAGCCAACCGGCTCCACTGTGAATCTAAAGTCTCGCAGCGTCTTCGCAAAGTATTAGTTCGCTGACGTTACTGAAACGGTGGATTGTCCGGCTTCGTATTTGTCGGTGATGACTTTTGGTGCTAACTGCGCTTAGACGGGCTCCCCAATCCTCGATGTTCTGGGTTGACCTTTTCCATCCGA +>s4 +CGTTCTCTATGCTAGCTAACCGCTCGAATACTCTGTGGGTTACAAACTCAGTTGGCACAAGGAATACGGATGATACTAACATATCGCGTCCCAAGCGTCGGAGGCATCACACTCGATGGGTAGCGTGTTGAGCTGATGAATCGACGATTATGACCGCTAGAAGACAAATTTAATTTTAGCTTGCGTGCCGGAGCGCTTTTGTGCGCGGTGTCTCTCGTTAAGAGGCTTAAACGCTGCTTGGGCAGCAACCTGGCCTCAGTGTCTCCTCTTACAGGTTGGTACGGTAAACTGGAAGACTCCAATTCTGCGATTTTCAATGCGACAGCTCCGTCCGTTGTCTCATACCCATTTTGCCCACATTGACTGTCTTCTGATCGTAGGCTCAGTAGCCCGGTAGGGTGAGGGGTTCTCGTGGGCGCTGAATATTGAGATAGGATTATGGCCCGGACCTCAAGGTAAGATATACATATTTGCAATCTACCATTATGTCCCCATCCACGGGGCCCTTAACCGCCTATTTCCCTACACCCAAGCCTGGTCTAGGGGCCCAGTCCTATTCTTGTTACGGTTACAGACATATCCCAGAGGAGCCCCCTCTTCACTTATTTGTTTCACGATAGGTAGATCTGGCTATCTAAAGGTTAGGGGTTGGCGATTGTCAACATTCCTTAGAACCAATCTCTTGGTCGCTCGAGCATTACGTATGCTCGTCATACATCTCCTATCCGTATTGACGGTAATATACAACTTGTCCTAGGGTTTATGGACGCCCCTGGGTCCTTAATGAGTAACTGAGTAATATCGAAGACGGATAGCACCAGCGACCCGACTCCACAATGAAACCAGATTCCCGCAGAGTCTTCGCAAAATATTACTGCCCTGACCTTTCTGAAACGTTGAATTGTACGGCTTGGTTTTTTTCGATAATGACCTTTGGTGCTAACTTCGCTTAGACGGGTACACCAGCCCTCGAAGTTTTGGGTTGACCTTATCCGTCTGA +>s3 +ATGAGGGATCGTAGCGCTTTTTAAAGAGAATGAGAAATCGCATTACTACGGGACTAAATCACCAGGCTTCTGTTGTGATGGCACGCAAAGCAACAGGGATGTGCGAAATCCAGTTAATTTTCGCAGTTTATCAGGAGAATGGACGCGAATATCTCACTGTGGATGTGTTCGGTATTTCGACATCCGATGGTCACCCCCGAGGCGGTCACGCTGGCTTACGATGCTTTTAGCTCAAGCCCGAGGCTGCTAGGCAGTAGTTACGTAAATTCGTCCCATCTCCCAGCTAGGCGTTTAGTAGGATCTTTCCCTTGTGATTGGCCAGCTCGCACATTAGTTAAAATTCTCTGGTTAACGTAGTCTTCGCCCAGACACATTAATGACGTTGGAAGGATGCATATGTAAAGTCTGAAGAGGCGAAGGGATCTGGTCGTAGTGTTAAACGCCTTACTTACCGTACAGGTAGAGCGAGTCTCTTTGGGTGAGACACCCCCCACAATCGGATTCAATGTCCCAGCAGGTATGACATGGCGTATTCAGTTGATTCGCCATGCTAATCCTAATGCACGAGCGTTGCGTCTCAGATCCTAGTGGCAGTCTTCTGGGGGCATGCGCTGTATAATCGAAAGCCTCGACGTTCGTAGTTCCGGCGATAGCATTCGTAAGAGAACCTATGCCGTCGGCTTGCCCCAGTAAAACAGGAAAGCGCTCAATTTGTGCGTCAATAATTTTCTCTAAATATCAAAACCACGTCTGAGAACCTACCTAGCAGCAAGTGATTTAGGATTAATCGAAGTCCTGGAAAAGGTGGGGCCTCACCTCGCACAACCTTCGACTCTACAGGCGGGTGAGGTGCAACTTGTGATGTGCTGCCTCGCGGACCGTATTGTAGAGCGCGTCCACTCATACGCCACAAAGCCAACAATCCCGTAAGAACGGCAAATAAGGAACACGTTGTCGGATGCCGTGGTCCTGATTCCGATGGCTGAAGTCCTTCATTCAG +>s2 +CTCAGAGGAGGTTGCTGTCGCGATTCATTATTGCTGTGTCGTTAGAAGTAGCACCATCGAAAAAAACGTCCACTCCTTCAACACGCCTCGCGATATGTCGGAGATATTGCCACGTTCTTCTCGTGCTAAGCTTGCGGTTCACCTCGGATGGCATGCAGAAGCGGAAGCTAGACCCCGTCGGTCACGTTTAGCAATCGTAACATTAGGATTCATTTAACCGGATTGAGAATCTTATCTGTTTATATAGGTCGTAGCCGTTACGCCATGATGAACTCTGCATCGGCTCCTGGCCTGAGTGACTCCTTCAGCTATACTCGTCCCTACTGCATATTGCAGATGTATTTTACTGACGGATACGTACTGAGCATAACGTCCTGAGACTTCGTCTACGATCAGACTTATGTCGAACGTGATAGAATGGTGGCAACCGATGGGAAATTCCATAGATATGATCCTATTAACCCGGTTCGGCACGCAGGGCAGTTGTTGGGACGCCGCGACCAGTGGCTAGCGGTTGGCCAGCACTGGCGACAAGACTTAAAAGGGCGAAATCACAGTATTAGCCATATATTGCCGGTTTACCACATGTATGCAGCAATTGACCCGTTTCTAGGGTTAGGGGTCCGCCACTCGAATTGTTCTACCATAGCCAATCATACAATACTGGCTCTGCTACTACATAACGATGTATGAGCATGAAACCATGTGAGGAGTTGTGTGTCTCAAGCCTAGTGTCTTGATCCACCGCATGCAACACTGCTGCATACTTTCATTAACTGTACGATCACTACCAGCTTGAAGGTCCTTATCTACATTTTCCTTTCTATTATCGTTGCCATTACCACCGCAACGACTAAAACCTCCTCCCAGTTACGCTTCATCGGTTATGTGAGCAAACTGGAGCATAAAGCAGCGGAAATACTGCCAGTATGCTTCCATGGACATCAAGGGTCCACAGCATCCTGTTCCCAACCAGGAGTACTGACTTGCCAAGCGCCCC +>s1 +CTAAAAAGATGTTGGTGAAACTCATCATTTCTATTGGGTATTTTGGAAGAGCACGCTGGCAAAAACTGTGGTTTCGTGCAAAATGCGATCTCAAGTGTTGGGGTTCTGGCCATGGACTTTTCTTTAACAACTAAGGGGAACAGTCCGATGGCAGACAGTTCCCGAGGTTCGATCTCGTGGGGTATACTCCCCCGTAGTGTTTCTTCGATCCGAATTTTCCGATTATGAAACTTCGGCACACGTATAGATCTCTACCTTTACGCCATGAGCTGTATTGTGGCTCCGTCGGACCTACGGGACGCTTACAACTAAAGGTGTCCCTACTTCAGGTTGGGGAGATATTTTCCTGTAGCATGCGCAGTTTGTATAATCATGTACGTCTTCGGCATTGTCGCGATTTATGTCCAGCGTGCAATGAGAATGTCACCAATTGCAGAATTCGATATTTGTTATCCTGTTACCCGGGTTCTAGCCACTCGGCAGATGTTAGGACATCGCGATCAGGGGCCTCCAGCTATCGTACATTGGACACCTAACTATAAAGAAGTCGGTGAGGGGACAAATAGTACTTTACCCTTTTAAGTCGAACATCCAATGTATCCCCGGTCGCACGTTTTAGGCGCGTGAGTGCCGCATAGTTCTTTCATACCTATTTAGTAAAATCTCTTGATTGGACCACTTGCGGAGGCTGACGGATGCAAAGTGGTCACTCAATCTGTGTGGCAAGCTGCGTGTCTTGTTCCCCTTCCTGTTAAGCTGGTGAAGTCGTCCAATAACGTTAGGCCGATTACCAGCCAGAACCAACTTACCGATATTAACAGTTCTATGGTCGAGAGCATCACCGCAACGACTATTAAAATTTCCTCCGGTATATCCTTCAGCTTTGATGTAGATATATTCGAGCAACTTGGCCAGATAATCCAGTCCGAAGGCTCCCACCGTCATTCAGAGTCCTCACGGCCATGGGCCATCTAAGTATATCGGACGTGAAACGCCCCGC diff --git a/example_files/pxbpseq_example/out b/example_files/pxbpseq_example/out new file mode 100644 index 0000000..e69de29 diff --git a/example_files/pxbpseq_example/ultra_100.tre b/example_files/pxbpseq_example/ultra_100.tre new file mode 100644 index 0000000..a5c98e4 --- /dev/null +++ b/example_files/pxbpseq_example/ultra_100.tre @@ -0,0 +1 @@ +((((s1:0.3603553431,s2:0.3603553431):0.8968782862,s3:1.257233629):0.4207546592,(((s4:0.1190332191,s5:0.1190332191):0.02544171746,s6:0.1444749366):0.7647640019,s7:0.9092389385):0.76874935):0.06349158892,((s8:0.3106889265,s9:0.3106889265):0.1031508249,s10:0.4138397514):1.327640126); diff --git a/example_files/pxcat_example/Concat_Sequence1.fas b/example_files/pxcat_example/Concat_Sequence1.fas new file mode 100644 index 0000000..8ae81a7 --- /dev/null +++ b/example_files/pxcat_example/Concat_Sequence1.fas @@ -0,0 +1,8 @@ +>Sequence1 +AAATTTCCCTTTCCCTTTAA +>Sequence2 +GGGGGGGGGGCCCCCCCCCC +>Sequence3 +CCCCCCCCCCCCAAAAAAAA +>Sequence4 +TTTTTTTTCCCCCCCGGGGG diff --git a/example_files/pxcat_example/Concat_Sequence1.phy b/example_files/pxcat_example/Concat_Sequence1.phy new file mode 100644 index 0000000..7ef0df7 --- /dev/null +++ b/example_files/pxcat_example/Concat_Sequence1.phy @@ -0,0 +1,5 @@ +4 20 +Sequence1 AAATTTCCCTTTCCCTTTAA +Sequence2 GGGGGGGGGGCCCCCCCCCC +Sequence3 CCCCCCCCCCCCAAAAAAAA +Sequence4 TTTTTTTTCCCCCCCGGGGG diff --git a/example_files/pxcat_example/Concat_Sequence2.fa b/example_files/pxcat_example/Concat_Sequence2.fa new file mode 100644 index 0000000..ca81deb --- /dev/null +++ b/example_files/pxcat_example/Concat_Sequence2.fa @@ -0,0 +1,14 @@ +>Sequence1 +AAATTTCCCTTTCCCTTTAAA +>Sequence2 +GGGGGGGGGGCCCCCCCCCCA +>Sequence3 +CCCCCCCCCCCCAAAAAAAAA +>Sequence9 +AAATTTCCCTTTCCCTTTAAA +>Sequence10 +GGGGGGGGGGCCCCCCCCCCA +>Sequence11 +CCCCCCCCCCCCAAAAAAAAA +>Sequence8 +TTTTTTTTCCCCCCCGGGGGA diff --git a/example_files/pxcat_example/Concat_Sequence2.phy b/example_files/pxcat_example/Concat_Sequence2.phy new file mode 100644 index 0000000..89e5871 --- /dev/null +++ b/example_files/pxcat_example/Concat_Sequence2.phy @@ -0,0 +1,8 @@ +7 21 +Sequence1 AAATTTCCCTTTCCCTTTAAA +Sequence2 GGGGGGGGGGCCCCCCCCCCA +Sequence3 CCCCCCCCCCCCAAAAAAAAA +Sequence9 AAATTTCCCTTTCCCTTTAAA +Sequence10 GGGGGGGGGGCCCCCCCCCCA +Sequence11 CCCCCCCCCCCCAAAAAAAAA +Sequence8 TTTTTTTTCCCCCCCGGGGGA diff --git a/example_files/pxclsq_example/Alignment b/example_files/pxclsq_example/Alignment new file mode 100644 index 0000000..ad64086 --- /dev/null +++ b/example_files/pxclsq_example/Alignment @@ -0,0 +1,16 @@ +>Sequence1 +AAATTTCCCTTTCCCTTTAAAAATTTCCCTTTCCCTTTAAAAAATTTCCCTTTCCCTTTAAAAATTTCCCTTTCCCTTTAAA +>Sequence2 +GGGGGGGGGGCCCCCCCCCCGGGGGGGGGGCCCCCCCCCCAGGGGGGGGGGCCCCCCCCCCGGGGGGGGGGCCCCCCCCCCA +>Sequence3 +CCCCCCCCCCCCAAAAAAAACCCCCCCCCCCCAAAAAAAAACCCCCCCCCCCCAAAAAAAACCCCCCCCCCCCAAAAAAAAA +>Sequence4 +TTTTTTTTCCCCCCCGGGGGNNNNNNNNNNNNNNNNNNNNNTTTTTTTTCCCCCCCGGGGGNNNNNNNNNNNNNNNNNNNNN +>Sequence9 +NNNNNNNNNNNNNNNNNNNNAAATTTCCCTTTCCCTTTAAANNNNNNNNNNNNNNNNNNNNAAATTTCCCTTTCCCTTTAAA +>Sequence10 +NNNNNNNNNNNNNNNNNNNNGGGGGGGGGGCCCCCCCCCCANNNNNNNNNNNNNNNNNNNNGGGGGGGGGGCCCCCCCCCCA +>Sequence11 +NNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCAAAAAAAAANNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCAAAAAAAAA +>Sequence8 +NNNNNNNNNNNNNNNNNNNNTTTTTTTTCCCCCCCGGGGGANNNNNNNNNNNNNNNNNNNNTTTTTTTTCCCCCCCGGGGGA diff --git a/example_files/pxconsq_example/Alignment b/example_files/pxconsq_example/Alignment new file mode 100644 index 0000000..b8e5b16 --- /dev/null +++ b/example_files/pxconsq_example/Alignment @@ -0,0 +1,16 @@ +>Sequence1 +AAATTTCCCTTTCCCTTTAAAAATTTCCCTTTCCCTTTAAAAAATTTCCCTTTCCCTTTAAAAATTTCCCTTTCCCTTTAAA +>Sequence2 +AGGGGGGGGGCCCCCCCCCCGGGGGGGGGGCCCCCCCCCCAGGGGGGGGGGCCCCCCCCCCAAATTTCCCTTTCCCTTTAAA +>Sequence3 +ACCCCCCCCCCCAAAAAAAACCCCCCCCCCCCAAAAAAAAACCCCCCCCCCCCAAAAAAAAAAATTTCCCTTTCCCTTTAAA +>Sequence4 +ATTTTTTTCCCCCCCGGGGGNNNNNNNNNNNNNNNNNNNNNTTTTTTTTCCCCCCCGGGGGAAATTTCCCTTTCCCTTTAAA +>Sequence9 +ANNNNNNNNNNNNNNNNNNNAAATTTCCCTTTCCCTTTAAANNNNNNNNNNNNNNNNNNNNAAATTTCCCTTTCCCTTTAAA +>Sequence10 +ANNNNNNNNNNNNNNNNNNNGGGGGGGGGGCCCCCCCCCCANNNNNNNNNNNNNNNNNNNNAAATTTCCCTTTCCCTTTAAA +>Sequence11 +ANNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCAAAAAAAAANNNNNNNNNNNNNNNNNNNNAAATTTCCCTTTCCCTTTAAA +>Sequence8 +ANNNNNNNNNNNNNNNNNNNTTTTTTTTCCCCCCCGGGGGANNNNNNNNNNNNNNNNNNNNAAATTTCCCTTTCCCTTTAAA diff --git a/example_files/pxcontrates_example/contrates_file.txt b/example_files/pxcontrates_example/contrates_file.txt new file mode 100644 index 0000000..7af6274 --- /dev/null +++ b/example_files/pxcontrates_example/contrates_file.txt @@ -0,0 +1,20 @@ +>s10 +100 10 20 +>s9 +100 11 20 +>s8 +100 12 20 +>s7 +100 13 20 +>s6 +90 14 20 +>s5 +80 15 20 +>s4 +110 16 20 +>s3 +120 17 20 +>s2 +100 18 20 +>s1 +100 19 20 diff --git a/example_files/pxcontrates_example/contrates_tree.tre b/example_files/pxcontrates_example/contrates_tree.tre new file mode 100644 index 0000000..a5c98e4 --- /dev/null +++ b/example_files/pxcontrates_example/contrates_tree.tre @@ -0,0 +1 @@ +((((s1:0.3603553431,s2:0.3603553431):0.8968782862,s3:1.257233629):0.4207546592,(((s4:0.1190332191,s5:0.1190332191):0.02544171746,s6:0.1444749366):0.7647640019,s7:0.9092389385):0.76874935):0.06349158892,((s8:0.3106889265,s9:0.3106889265):0.1031508249,s10:0.4138397514):1.327640126); diff --git a/example_files/pxfqfilt_example/fqfilt_test.fastq b/example_files/pxfqfilt_example/fqfilt_test.fastq new file mode 100644 index 0000000..5459b75 --- /dev/null +++ b/example_files/pxfqfilt_example/fqfilt_test.fastq @@ -0,0 +1,4000 @@ +@M02542:108:000000000-AJUMM:1:1101:9644:1028 1:N:0:4 +NAGTTAAGGATGAAGAACGCAGCGAAATGCGATACGTAATGCGAATTNCAGATTTCTAGTGAGTCATCGAATTTTTGAACGCACATTGCGCCCTTTGGNATNNNNNNNGGCATGCNNNNNNNAGCGTCANNNNNNCTTATCAANNNNNNNTTGCCGTNNNNNNNGTCGCTGNNNNNNNGCAGTGTNNNNNNNAAAGATANNNNNNGTGTCGAGTCGAGCCNNNNNNNCAATGAGNTTNAANGGNNCGNACNAGTNNGTNGTTNNCNGNNCCGGTTCNANNTTTAATCCAACCTGCAA ++ +#8ACCGGGF@FGDFFGGGGGGGGGG7BCD?DD#######8+6@=CG#######:8<>DGG8######*6>@FFFC=FFFFCB#######2275/:1#*1#1*#22##22#2/#*/1##.,#)*0##0#1##,-48;B*#0##--331?:FGGFG0(--6###. +@M02542:108:000000000-AJUMM:1:1101:17188:1030 1:N:0:4 +NAGACACCGATGAAGAACGTAGTAAAATGCGATAAGTAATGTGAATTNCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTNTTNNNNNNNGCATGCCNNNNNNNGCGTCATNNNNNNCTCAAATCNNNNNNNTTGGTTTNNNNNNNTACTCTTNNNNNNNCTAAGCGNNNNNNNGAAATGTNNNNNNATGAGTGGTACTAGANNNNNNNGAACTGTNTTNAANGTNNTANGTNTATNNAANTCANNGNCNNGTAAAGTNTNNTTTTATTACACAGGCTCNNNC ++ +#8CCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG#:DFGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG#:D#######::DFGGG#######::DFGGG######8:AFGGGC#######88DFGGG#######:8DFGGG#######88DCCGC#######46>CFGF######446@CFCFGGGGGG9#######12==/<9#2=#11#/2##2)#/1#/*9##0-#01)##)#1##(-40;=8#0##(-4FG:#######46@DFED######164=CFEFFGFFGGG#######12*=FE*#*1#**#**##*)#**#*/1##04#)*.##)#*##,((-)8/#)##--32(063<6*:42)()###( +@M02542:108:000000000-AJUMM:1:1101:20486:1030 1:N:0:4 +NCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGANTTGAGGTCAGATTGTCAAAAAATTGTCCTTGCGGACTGTTAGAAGCTCGANCANNNNNNNACTTCAANNNNNNNGCGTAGANNNNNNTCACACCGNNNNNNNCCGTAAGNNNNNNNACTAATANNNNNNNGAGGAGTNNNNNNNTGCCAGCNNNNNNGGCCTCCAAGTCCAANNNNNNNTCACAAANGTNTTNAANNTTNCGNATTNNCTNACANNCNANNAGGCATGNCNNCCGGAATACCCAGGAGCN ++ +#8AACGEGGGGGGGGGGGGFFGGGGGCEFGGGGEGGGGEFGFFGFG,#::@DFGGGGGGGGGGAFAEFFGGF,CFGGGFGGE:FEEFFFFFGGGGGGG#:4#######+9BFDFFGA#######385D8DC######*4*=FFGC+>+1CF7#######12:C395#*/#*2#21##10#*/#11*##),#)1)##0#*##(-(-)9)#)##,((-4((*29)966(((# +@M02542:108:000000000-AJUMM:1:1101:15624:1031 1:N:0:4 +NCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGANTTGAGGTCAAACTTTATGAATATTGTTAGGCCGAGCTTACATGCTAGACANCANNNNNNNCCACTATNNNNNNNTGGTAGANNNNNNTACATTATNNNNNNNGACGGCTNNNNNNNACACCCTNNNNNNNACCGTATNNNNNNNTAACACANNNNNNGTATCACTCAATACCNNNNNNNAGGTTTGNGANAGNAANNACNCTNAAANNGGNATANNCNCNNGAATACCNAANGGTGCAATGTTCGCTAAN ++ +#8BCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG#:DFFGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG#:C#######::CFGGG#######::DFGGG######::ADGGGF#######88A@FG>#######:8@FFGF#######88@>FFA#######66>EFF@######141*1?BF6#)-#--466?2*7:8*((-(,# +@M02542:108:000000000-AJUMM:1:1101:20739:1031 1:N:0:4 +NACTTGCAGATGAAGAACGCAGTAAAATGCGATAAGTAATGTGAATTNCAGAATTCAGTGAATCATCGAATCTTTGAACGCATCTTGCGCTCCGTGGTNTTNNNNNNNGCATGCCNNNNNNNGTGTCACNNNNNNATCGCCCCNNNNNNNGTTAACGNNNNNNNTCGAGGGNNNNNNNGACTGTGNNNNNNNCGGCTCGNNNNNNAATACATTAGCTTGCNNNNNNNGAGTGCCNGGNACNGGNNTGNTANTTANNTTNGCCNNANCNNTAGGAACNCNNCAGTGGTGCTGCTTATANN ++ +#8ACCDFGGFCFGGGFGGGGGGGGGGAFFEECGGEFGGGGGFGGGGG#:CCFFGGGGGGGGFGGFGGGGGGGGGGGGGGGGEGGFGEFEEFGGGGGGG#:D#######::9BFFD#######::AFGGG######+:ABF?FF#######+3+ABFC#######:8@>BF+#######88@EECB######46=AF9EF7CFGBCC#######1**=*4=#/2#*2#12##/.#11#/1*##.(#.*0##.#1##--4()9)#0##(,4((465:C**,654)## +@M02542:108:000000000-AJUMM:1:1101:22556:1031 1:N:0:4 +NAGACTCTGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTNCAGAACTCAGTGAATCATCGAATCTTTGAACGCATCTTGCGCTCCTTGGTNTTNNNNNNNGCATGTCNNNNNNNGTGTCATNNNNNNCTCAACCTNNNNNNNTTTGCTANNNNNNNCTAGGAANNNNNNNATCATGGNNNNNNNCTGGAGGNNNNNNGTCATCAGCTCACCCNNNNNNNATCAGTGNCANCGNTTNNCTNGGNGGCNNGANCTGNNGNGNNAGACTTANCNNCAGGGATCTTCTTCATTNN ++ +#8BCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG#:DFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGG#:C#######::CFGGG#######::BFGGG######::AFGGGF#######83AFGGF#######38@FDGG#######38@FGGG#######36@EGGE######16>FGGGGGGGGGGG#######21=:CFF#2/#2/#2:##22#2/#117##)(#01.##)#/##(--4FB0#)##(-3::1:@GFFF<4)66## +@M02542:108:000000000-AJUMM:1:1101:21008:1031 1:N:0:4 +NCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTACCTGATTTGAGGTCAAACTTTGGTTTGTTTGTTGTAAGGCCGGGCCTAATAGCAATNACNNNNNNNCACTATCNNNNNNNGAGCTGGNNNNNNCTAATACANNNNNNNAACAGCTNNNNNNNGAATTACNNNNNNNGCCAATANNNNNNNAGCAAACNNNNNNATATAACCCGAGTATNNNNNNNCACCAAANCTNTTNTTNNTANAANAAANNGANACTNNANANNACAGACCNTNNGGAATACAACAGAG ++ +#8BCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGFGFFGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGF9#6:#######:9CBFCF#######+:9BDFC######::AFGGGE#######886D=,A#######+38DFFC#######88@@:DF#######66>EFG7######4**4;C;C8=C=:<+#######*2***=F#2*#*2#*2##*0#/*#*19##),#)1)##0#*##((,()).#)##(-(-(3<**08<(( +@M02542:108:000000000-AJUMM:1:1101:15110:1031 1:N:0:4 +AACTCGCTGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTNTTNNNNNNNGCATGCCNNNNNNNGCGTCATNNNNNTCTCAAGCCNNNNNNNTTGGTATNNNNNGNTACTCTTNNNNNNNCTAGGCGNNNNNNNGAAAAGTNNNNNNATGAGTAGTACTAGANNNNNNNTTCAGGANATNTCNATGTATNAGNTTTNTCCNACTNNTNGNNAATTCTTNGTNGTGAATTTTTAGTATCATNNC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8EFGGGFFGGGGGGGCGGGGGGGGDGGGGFF#:C#######::BDFGG#######::BFGEG#####::AFEEG9F#######88=CGGG#####3#8@DFGGG#######886FFGE#######46>D>F?######46*;EB;FC;:F9C,#######2:7CCG6#*2#2/#12:CFF#**#119#)0(#.*)##)#*##,,413=?#.-#(-3((64BD*.9::4)64##( +@M02542:108:000000000-AJUMM:1:1101:11916:1032 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGAGTTCAGTCAATTGTCTCAAAAGAGAGACAGTTAGAAGCTNGCNNNNNNNTTCACGGNNNNNNNGCAAAAANNNNNCACACCGAGNNNNNNNCCGCAAGNNNNNANGCTAATGNNNNNNNGAGGAGCNNNNNNNAGCCGACNNNNNNCCAAGTCCAATCCTANNNNNNNCGCAAAGNCTNATNGGTTGANAANTTCNTGANACTNNANCNNGCATGCCNCCNGGAATACCAAGGAGCGCAN ++ +CC#######88@:F:7#######6**5@1*######46=C:,,?CFGGGF:#######12/=<*+#//#2*#**0:*/#2*#111#..-#01)##0#*##(-4:3))#0(#--(,:<9@>F5D00107(# +@M02542:108:000000000-AJUMM:1:1101:17356:1032 1:N:0:4 +AACCACTCGATGAAGAACGTAGTAAAATGCGATACGTGATGTGAATTGCAGGTTTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTCTGGTNTTNNNNNNNGTATGCCNNNNNNNGCGTCATNNNNNTCTCAAACCNNNNNNNTGGTATTNNNNNANACTCTACNNNNNNNAACTTGANNNNNNNTTTTGGCNNNNNNGTGTTAAACAGCCGTNNNNNNNGATAATGNATNAGNTTCTACNAANTCGNTATNGTGNNANGNNGTGTTGTNTANCATGTAAGCTCGGCCTAA ++ +CCCCCGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGFGGGGGGGGFGGGGFGGGGEGGGGGGGFFGGGFGGGFCGGGGGGEFFFGGGGGG@DFDFG#9C#######::==FFG#######::=AFFC#####4:ABE,EGG#######88ADEGG#####8#88AFGG9#######384DFG9#######66@@E*3######16>DFGGCF97:EE5#######/2=77F+#/2#2*#/2:CGF#*1#2//#0),#)10##0#1##--4::F:#.(#-,-4846BD>6<163:(5 +@M02542:108:000000000-AJUMM:1:1101:14530:1033 1:N:0:4 +AACCAGTGGATGAAGAACGCAGCGAAATGTGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTCTGGTNTTNNNNNNNGCATGCCNNNNNNNGTGTCATNNNNNCTTCAACCCNNNNNNNCCTTGTTNNANNGNTGTGGTGNNNNNNNTTTGAACNNNNNNNTGTAATTNNNNNNCTCGTAATACATTAGNNNNNNNATTTTGTNATNGGNTTGACTNAGNGTANTAGNCTATNTGCNNAGGACACNTTNTCAGAGTGGCCGAGACAT ++ +CCCCCGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDFGGGG#:C#######::DFGGG#######::DFGGG#####4:AFGGGGG#######+8AFDGG##:##3#38FFGFD#######44>+@F>#######64@E*7E######*6>8D>>8:9CF9A,#######22=:*=>#/1#*2#2/:5C7#/1#12/#00(#01<5#).*##((,(8.)#04#-((-(,:=3<;700(414 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGEGGGGGGGGGGGGGG>7CFGGGGFGGGGGGGGFGG##:##:9DDFFGF#+:####::=FGFGA##:#4:6)./=7B),7>F7FB06:FFF?712:?029(4/**124(((,-(( +@M02542:108:000000000-AJUMM:1:1101:9201:1064 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTGCCTGATCTGAGGTCAAAGCGTTGATAACGATCAAGAGGAACTTTCGGGCAAGACCTAGTTNNCNNTAATCCCCNTTNNNNAGCTGGTCNNTNCGTTAATATNNNNNNNGGTTCAANNTNNGNTAGTAAAGNNNNCNACTTGTAGNNANNCTAAAAAANNNTNAAGCAAACCGAAACCANNNNNANAAGTGCTCACCAACCAAACCCAGTCAAGCAACGACGGCGAGACCTACCCCCCAAAGGATAGGGTCTGAGAGCT ++ +CCCCCGGGGGEGGGGGGGGGGGGGGGGGGGGGEGGGFFGGGAEGGGGFGGGGGGGGG?FGG7F@+C6FF,,@FC@<CEC><3<5C*96*:C@)4>53).().9):9?236)01)-(22?0(,6:C*)0(,64440- +@M02542:108:000000000-AJUMM:1:1101:15845:1064 1:N:0:4 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGF##:##:BFGGGGG#:D####8:DFGGGG##:#:BFGGGGGE#######88@FGGG##:##6#86@FGGGF####6#6>DGFFG7##4##46=FGGFF###4#33=CFGGGGGGGGGG5#####*#11AEFG*ADGCEG6CCGG)C7FB4FF7>DFFFF:9:AB:=B@>FFB:BA)<A?<<99>GD@5(3()(,47( +@M02542:108:000000000-AJUMM:1:1101:17704:1064 1:N:0:4 +AACCAGTGGATGAAGAACGTAGCAAAATGCGATAAGTATTGTGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCNNGNNGGCATGCCNGTNNNNGCGTCATTNNCNTCTCAAACCNNNNNNNTTTGGTGNNGNNCNGTACTTCTNNNNTNAAGTTCGCNNGNNATGAATCGNNNCNAGCTGTTTTTGTGGTTNNNNNANTTTATTCAATGTATTAGGTTCATCCAACTCGTTGATTGACATGGAAACACCCAGGAACGTCCGGCTCTGCCTA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGG##:##::FGGGGG#4B####:9BDFGGG##:#::FGGGGGG#######88AFFFF##6##8#:AFEGGGG####8#68@FGGGE##8##86@FEGGF###6#64>FGFGFGGGGGGGG#####*#12AEGGGFCGGGGFGGFGGFF>DGGGCGFFFFFC>FE66C6C7:?2F?F?:>BFFF?,4<>*/771,,8.545 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG##:##:CFFFGGG#:B####::DFGGGG##:#:BFGGGGGE#######99ADGGE##:##8#:8FCFGFC####8#8@=:FGGF##3##48DFGGGB###*#33>BFGCCFFFDGGC=#####4#21//:FFEGGGG5>CGACFFFCDC7FGFFFAFFCFFDFF:F*,2FG@CE####+#++33@=9=##8##*3@5DC:8###*#*4>*4?EF95/:*1*2#####/#11=A5:CECE3EE7C*835>)/1:>FD7?:17)9>>5=*0)0).6,9416F?2))6).:)/9*0*,4>:D8,###1#441CEEGFGECFGF,=#####2#**//>0+1;CF??99:+;71+2;CGGCG+1);F=3>BF>CF+))).96<15(-47:>2<EE###*#6*3>DFFGGF,==,5=#####4#12/7FGGFD,;949=C:;8);D**;/9/)8(68C*8;+=*2=73<)9>F:FB(7;6>(1:77++##+##6*4@DEA=###6#**1*=;?,6,22,:,*#####4#1/=C7*AF*CD*:*C+@F*26*><745::;)3+2;FAF464+6:010))4)((13).6)-?:***.42:?)4)( +@M02542:108:000000000-AJUMM:1:1101:9266:1067 1:N:0:4 +AACGCGTTGATGAAGAACGCAGCGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCNNCNNGGTATGCCNGTNNNNGCGCCATTNNTNTCTCAAAACNNNNNNNTTGGTGTNNANNGNTACTCGGGNNNNATGCTTGAGTNTGNTTGAAAAGTNNNGNCACGGGAAGTAATTCTNNNNNANGCTGTTTATTCAATGTATTAGGTTTATTCAACTCGTTGCTTTATAGGGGGACGACTTGATTGCTATTAGCACCG ++ +@CC-C@C:CCEGGAD9@@F;@+FC7@CFGGF:DFFGG9@F9EAFAFDGA9,@EDF9FFEF,:C@CFDF86FFFDFFDDFG7C@@FE9EFEC6D6,66FAEDC##:##::?C,=,,#:B####+:B+:@FF##:#4+:A7FFGB#######8+8A:AF##+##8#+3=>==@C####38>@+F,465)(5-(-(((.4A?7CF><<44().,( +@M02542:108:000000000-AJUMM:1:1101:14667:1067 1:N:0:4 +AACGCCACGATGAAGAACGCAGCAAAATGCGATACGTAATGTGAATTGCAGGTTTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTCTGGTATTCNNGNNGGTATGCCNGTNNNNGCGTCATTNNTNTCTCAAACCNNNNNNNTGGTATTNNGNNANTCTCTACTNNNNTTAACTTGAANTANNGTTTTGGCNNNGNTGTGTTAAACAGCCGTNNNNNTNGATAATGTATTAGGTTCTACCAACTCGTTATAGTGGAAGGCAGTGTTGTCTAGCATGATAGCTTGTCCTAACA ++ +8C@-,8CFGCFEGGGGGGBFGE>FFGGGGGG>EFEFCCFFF@####833@@C=>3,#56##*6@@CFG?###6#44>5:2?>,;7,4**4#####*#2*2*1AEC>@D797FF49*9*0>90)(1;2/85*.9>6:74<*.846)4)-67))-*2:*2(.--)-4: +@M02542:108:000000000-AJUMM:1:1101:12514:1068 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAGGTCAACCATAGAAAATTGGGGGTTGTTGGCCAGCATCCACCGGGACCCTNNANNGAGAAGAANTANNNNGCTCAGAGNNCNACGGCACCGNNNNNNNTTTTAGANNCNNCNGGGTGAGCNNNNGGGCCCAACANCANGCATTGCTTNNNGNTTGTAATGACGCTCGANNNNNCNTGCCCCTCGGAATACCAAGGGGCGCAATGTGCGTTCACAGATTCGATGATTCACTGAATTCTGCAATTCACATT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG##4##::B=DEDF#:B####::BFGGGG##:#+:=FGGGG7#######88@FFFG##:##6#86@FGGFB####66D@FGDGGC#11#668BEFGGG###4#*3B*;E<;BFAEGGGE#####1#11:FGGGGGC3CC+A6*755>DGGG)77DGGFGCGEG5#####4#22=CCCE94EFGGGCBGFF(=FGEE:749=*14@FFFA9AFF?:7F35?<24<<:A> +@M02542:108:000000000-AJUMM:1:1101:18601:1068 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACATTTCAGAAAGTTGGGTGTTTAACGGCTGTGGACGCGCCGCGCNNCNNGTGCGAGTNTGNNNNCTACTGCGNNGNAGAGGCTGCNNNNNNNCCGCCACNNTNNTNCGGAGACGNNNNCCGCAGAGGGNGGNNCGATCCCCNNNGNCGACCCCCCGGAGGGGNNNNNGNGTTGAAATGACGCTCGGACAGGCATGCCCGCCAGAATACTGGCGGGCGCCATGTGCGTTCCAAGATTCGATGAT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGG##:##:BFGGGGE#:B####::>FGGGG##:#::DFGGGGE#######88DFGGG##6##6#8>DFGGGC####66CFFEGGGG#6=##4=8FGGGG###1#33=CF8CEGDG*>EGG#####2#11:FG?CFGGGGGDGGFGGFFGGFFFGGFF>FEG4<29*2=FF9B>BE)(7174).(((,)2*90.64(-6:-) +@M02542:108:000000000-AJUMM:1:1101:17365:1068 1:N:0:4 +AAGACAGAGATGAAGAACGTAGTAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCNNANNAGCATGCCNGTNNNNGTGTCGTGNNANTCTCAATCCNNNNNNNTTTTGAANNANNCNTGGCTTGGNNNNGGGAGCTTGCNGGNACCCTGCATNNNGNGGTTCGGCTCTCCTTGNNNNNANTAGCTCGGTCACGTTAGTTGCCCGACGGTTCACGGTGTGATAGTCTAACTTCATCGCAGTTGTGACCGCCTCGG ++ +CCCCCGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGDFGGGGGGFGGGGGGGGGGGGGGGFGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGF##:##9:BDGFGC#::####4:,FDFF@##:#::FFFDFGE#######884DFEG##:##8#86A=DGGG####38>8DFGGC8#38#+@3@DGGG@###4#64DDFGGGGGEEFEE7#####4#22:511AEGE3+C=CF:;FFFGC*7D5DEE0@FC>>,737@+:A<)**14?A)*.6(,,(4(3 +@M02542:108:000000000-AJUMM:1:1101:8841:1068 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACATTTAAGAAGTAGGGTGTTTAACGGCTGTGGACGCGCCGCGCTNNCNNTGCGCGTGNGCNNNNTACTGCGCNNGNGAGGCTGCGNNNNNNNCGACACTNNANNTNGGAGACGGNNNNCCCGCGTGGGNGGNGCCGATCATNNACNCCGACCCCCCGGAGGGNNNNNANGGTAGCAATGACCCTCGGACAGGCATGCACGCCAGAATCATCGTCTGACCGCATTGAGATCGACGAGTCGCTA ++ +CCCCCGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGEDFGGGGGGG9+++##:##9+4D+488#:A####++33B?BF##3#++:++,,8+#######63***53##*##6#8**@:FFE####61**=*1***#**#11*11*=*+##2*#*2;E8CG5*:/***2*#####/#19C*/+<+2<0++2*15*1))/1**2*2196)<9>@467:*+((((.*/,)(((-)6<04***)/((-.(((, +@M02542:108:000000000-AJUMM:1:1101:19257:1068 1:N:0:4 +AAGGCCATGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCNNANNAGCATGCCNGTNNNNGTGTCTTGNNGNCATCAACCTNNNNNNNTTCGTGCNNGNNGNCGGTTGGANNNNGGGGCATGCTNCCNNGAGGTGGCNNNCNTCAAATGCTTCGGTTGNNNNNGNGGGTCGAACTCGACTGGGCGTTGTACCATCCTCGCTCCTCCGAGAGACGTTCCCCACTTATCGAGTCCTCCCT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG##:##::DFGGGG#:B####9:BFGGGA##:#:BFFEFGGF#######88D=D=C##:##8#:3ADFGG,####88>DGGGGGF#38##46:DFFG7###6#14>DEEGGGFGGGGE5#####*#2*=FFGDCFFFGFEGGF47;BGDGFFC79@:FFGF@:@FGFE0(((8>>?FB(38(4>FGG8#88#6@DE:FGGG##53#6=DEGFGGDFGCGDFF#####4#2:CFGGEGGFGGGGG7ADGFFFFFGFFGACEFF:ADFBFG6CE57C:BFEB>AAFFFA4296??F:<@DDGD)9*/=)*79@@(@4:)<2<0>*96:=)66)).4:)*2?4CB259AAB22 +@M02542:108:000000000-AJUMM:1:1101:12266:1069 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAAATTTGATGATGATTTTGTCCGAAGACCATTATAAGCGGACTCTGNNGNNTCAAACGANAGNNNNACATGATTNNCNCACTGACATNNNNNNNCCAAAGGNNGNNTNCCGCTGATNNNNTTGAGAGGAGNCGNCCAATATGCNNCCNGCACCTCCAAGTCCAANNNNNGNAAGGTCGTGAAACCCTTGGAGTTGAGAATTTAATGACACTCAAACAGGCATGCTCCTCGGAATACCAAGGAGCG ++ +CCCCCGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFEFGGGGGGGGGGGGGGGGGGGEDGGGGGGGGGGGEFEGGGGG##:##,:BEGGGG#4B####::DFGGGG##:#:BDFGGGGF#######88DFGGG##:##8#:@=FFEGG####88@D+@FG?@#6@#6@DF5DGGC##4>#4=>DFCGEEFGGG=;C#####/#22:>FFGGD?7FFF=FFFE8C*A*,,,4#####/#1*2A*7/8DGGFGG5*81)88>559*2*0),../5>()/*00).5))0)-0((5-((,7(*2>675?1((,4(- +@M02542:108:000000000-AJUMM:1:1101:16389:1069 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGACTTGAGGCCAAAGCTTTAAAGTGTATTGTCCGTAAGGACGACTATAAGCAGCACCNNTNNAGAGTTCCNAANNNNGTGGCGCANNTNATTATCACANNNNNNNCCGGCACNNTNNANGCGCAAGCNNNNGTATTTCAAGNCGNGCCGACTACNNCCNAGTCCAAATCCACCTCNNNNNANCGCGTTAACAATCTGAGGGGCGATGGTTACGTGACACTCAAACAGGCATGCTCCGCGGAATACCACCGAGCGCC ++ +CCCCCGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGFGGGGGGFGGFFGFGGGGFGGGF,CAFGGGGGGGGFGGGGGGGG##:##::DFG:F####848@FCFGF3#*4#*64>DCGEF##4*#64:CEGGGFGCGGGEG#####*#22>F9>EFG7FFF<:CA9>5;7CDDDCC=FFF@FFF26?C:97(845.91?545,(-,(45CC@*)(-(-107( +@M02542:108:000000000-AJUMM:1:1101:18214:1069 1:N:0:4 +AAGACACCGATGAAGAACGTAGCAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCNNGNNGGCATGCCNGTNNNNGCGTCATTNNANCCCTCGAACNNNNNNNGGGGGTCNNCNNTNGGGATCGGNNNNCCCTCTGCGGNGGNCGTCTCCGANNTANAGTGGCGGTCTCGCCGNNNNNCNTCCTGCGCAGTAGTTTGCACACTCGCACCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAACTTTCTGA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG##:##:CDFGGGG#:B####::DFGGGG##:#:BFGGGGGG#######88AFGGG##6##8#:@FFDGGE####66@CFGGGGG#6D#6>DGGGGG>##4*#64BFGGGDEGEEGGG5#####*#*1:FDFFFFFGDEFFF9DCFFFGD#36#4@DECGGG,##*4#*4B5AGGGGGGGGG6C#####1#///*:CFCGFCFFCE77CFFFGGDCCGF4??@@5*?2:B2???FFF<2(,4(8B@GG3>2((33<)6 +@M02542:108:000000000-AJUMM:1:1101:11945:1070 1:N:0:4 +AACTCGCTGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAATGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTCGGTATTCNNANNGGCATGTCNGTNNNNGCGTCTTTNNANTCTCAAACCNNNNNNNTTGGGGGNNANNTNTTGCCCTCNNNNCTTGACTAGGNTTNGTTCGTGAGNNCTNGTCGGCTTTGTTTCGGNNNNNTNTACAATTTTTTAGGCTTTCTACAAGTGGTCACCTTTCCTAGCCCCCCTTGACCCTGGCTTGATCGTAACATATT ++ +@C##6##6#:8@7FC@F####483>*@FFGD#6@#*6*>DGF?*##4*#*4=C5=:*,4<86C8/#####2#2/*2>CGGG9DC66CF?FF6=7:*9:77F*.7=C4=)/*:*+43(,7B4:F)4(1410465221>:(184<6)) +@M02542:108:000000000-AJUMM:1:1101:10215:1070 1:N:0:4 +AAGTCCGGGATGAAGAACGCAGCGAATTGCGATATGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCNNANNGGCATGCCNGTNNNNGTGTCATTNNANTCTCAACTTNNNNNNNCTTTGTTNNGNNGNTTGGACTTNNNNGGTTTTTTCCNGCNTATCACAATNNCANCTCCTCTTAAATGCATNNNNNGNACTCTATCGAGGACCAGCCTTGGTTTGATAATCCTATCTATGCCGTCGCTGTGGACTTTAAGCCTGTTCAGCTT ++ +CCCCCGGGGGGGGGGGGDGGDFGGGGGGGGGGGGGGGFFFGGGGGGFGGDEGGGGGGGGGFFFGGGGGEGGEFGGGGGCECFGEGGFGGGGGDGGFDAFFC<##4##:9BFFFCF#:B####44:DFGGG##:#:8AFGGEEF#######+86DFGG##+##8#:8>7@,>F####833@DFF*,E#66#6>DD52>:;##*6#4*1=8E2C;7,=CC;=#####1#22:7FGGGDC*575/C:C*.**9DCF3*9666?*//:4?DF+4323>:@(.42()48)699>F:FF944.::AA +@M02542:108:000000000-AJUMM:1:1101:19750:1070 1:N:0:4 +AAGGTCTAGATGAAGAACGTAGTAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCGTGGCTTTCNNCNNGGCACGCCNGTNNNNGTGTCACGNNANCCCTCGCCANNNNNNNAGCGATANNCNNGNAAGCGGATNNNNACGTTGCCGGNCGNGAGATCGGCNNGTNCCGAAATGCATTAGCGNNNNNCNAAGCACGTGCGACGTTGATAATTGTCTACGCCTCGCGGACTTTGTTCCTCGCTTCTAATCGTCGCGAGACAATT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG##:##:CFFGGGG#:D####::DFGGGG##:#:BFGGGGGC#######88AFGGG##:##8#38DFGGGE####48@DEGGGGG#51#6>DGGGGGD##/*#*4=8FGF?CCGFGGG7#####2#12=CCFEFGGDGDEEGFFGFFGGDGFGG=:>@4CDF0B@GD6<<)48FFFEFFF?AAFF>)>F599;;>>FB2< +@M02542:108:000000000-AJUMM:1:1101:9480:1071 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAACCTTGTTTGTTGTTTTGTACGGCAAAGCCAAATATACCAAAAATNNANNAATCATAANTCNNNNCGAGTTGGNNANACCTAATACNNNNNNNATGTTACNNANNGNCCTATTCANNNNGACTCATGACNATNCTTTTCAAGNNAANGCATAGTTCGACTACGNNNNNCNCTCAATACCAAAACCGAAGGTTCGAGAGAGAAATGACCCTCAAAACGACATGCCCTTTGGAATACAAAAGGGCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG,FG@FE,E6FG@CEFGGGGGGG,FGECFD@FGGGC@A8,:969+@7CF<@@CFCC?CFFF=,E,CF##:##:,9,:,,<#4:####::+B=4B=##:#::+4AFCF5#######88AFB)4280().(6**/*)),.,2:(( +@M02542:108:000000000-AJUMM:1:1101:17622:1071 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGCCAGATCATAAAATGGGGTTTAGTCAAGCAAGCTTGATCTAAGAATTANNANNGGATCTAANAGNNNNCTCTTATCNNGNCCATACTTTNNNNNNNCCTCGGCNNANNANTTATCACGNNNNGTGGAACCGANTANAAAAAGGATNNGCNAATTCATTTCAAGCGANNNNNTNAGTGAAAACCAGCAGCGCTCAAGTCCAAGCCTTCAGCCTTAATAAAAAAGTTGAAGGTTGAGAGTTTCATGAC ++ +CCCCCGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGDFGGGCGGGGGFCEGFFGFEGGGGGGGGGGGGGGGGGGEFFGGGCEFEFE##:##::D7FFGG#:?####+:B=FCF,##:#::?FBFGFG#######88A=DD:##:##8#:8>FFGGC####88@DEEDFG7#58#36>DCCEF,##4*#6=>EGGGGGGG7CGE*#####/#214=CCCFGCFCDFCG>GDF:>6+23+?F>3)7*9/:@4C??24.60=D?=959).5(61?74:7<235:5><5-967)70*@CF>##46#14>EGGGGGGGC56CC#####2#/*=:5@+A7<375**1=::5<3*9**2996<6*:7*-7?>?*:(,-//9:@4B##:##8#:3>>DFD>####4+8>BE7<,@#6@#**6DFEG58##4*#*/***358C**/=***#####2#*1:7C*:C5**2**11*09@>5D3)9*9**-95))51*)20A392>E55)9<-2)))3,4/*0)17(,4((( +@M02542:108:000000000-AJUMM:1:1101:12139:1072 1:N:0:4 +AACTCGCTGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTTAATGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTCGGTATTCCNANNGGCATGTCNGTNNNNGCGTCTTTNNANTCTCAAACCNNNNNNNTTGGGGGNNANNTCTTGCCCTCNNNNCTTGACTAGGNTTNGTTCGTGAGNNCTNTTCGGCTTTGTTTCGGNNNNNTNTACAATTTTTTTAGGCTTTCTACAAGTGATGATCTTTACTAGCTCACCTTGAACCTGGCTTGCTAGTAACATAT ++ +CCCCCGGGGGEGAGGGGGGGGGGGDGGGGGCBDEGGGGGGGGGGGGAFGGEGGGGGGGGGAFEGCEEFCFFGGFFE9EAFF7F7CFFFGCFEGF@F,C8DDGG#:##::BEG8FF#4:####::BFFFFG##+#+:99DGG8FF####+8@++@F=D,#66#36*>EGG6*##16#*1>*DEDEFGGGG=8*#####/#22*/9@FEGFGCC6CC;D*9977:9CF:**.*9CFFB****04)))*)*.*)542DFGGCE##4*#4*>DFCDBFG=FFFFC#####4#227C8FGGG7CCCF?FA*1;FCG*21;*10;AF4B?(5037C37EFF;D5=EEGC:#####*#22==7C5CFGGF+<+@6:*1)7*8DEFFFBGFF(408FF*46)-6).:)5:)0*058028<:B2. +@M02542:108:000000000-AJUMM:1:1101:17115:1074 1:N:0:4 +AAGACTCTGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAACTCAGTGAATCATCGAATCTTTGAACGCATCTTGCGCTCCTTGGTATTCCNTNNAGCATGTCNGTNNNNGTGTCATGNNANTCTCAACTTNNNNNGNTTTGCTANNCANATCTAGGAAGNNNNGGATCATGGGNGCNTGCTGGAGGNNTTNTGTCATCAGCTCACCCNNNNNANATCAGTGGCACCGCTTAGCTTGGTGGCTTCACCTGATGTGATAGACATATCATCAGGGATCTTATGTACTGA ++ +@CCCC3>D9+#88#6>DCFF??+##56#353@E;C93DAC6,=;#####*#*24=9F@6CCDEEE*1:DFAACD**9*/))/64=;=41;2+@#6>DECFFFE##/6;CFCGGGGFGGGGG?FF###2#2#2::EFGF+:C>EE=6CFGFFFG95DFC7<4()7CFFBF?DF+38A9?>*(/6:<-(3(3(9CFF>),3(,,(-) +@M02542:108:000000000-AJUMM:1:1101:19061:1076 1:N:0:4 +AATAAGCCGATGAAGAACGTAGTAAAATGCGATAAGTAATGCGAATTGCAGAATTCCGTGAGTCATCGAATCTTTGAACGCACATTGCGCCCCCCGGCTGCCCNGGGGGCATGCCNGTNNNNGCGTCATTGCCNTCCCCTCAANNNNNGNTTGGCTGNNTGGGCCGACGTCCNNCNGTGGCTTTGTNCCNGGGGGGACGGNCCCGAAAGGCAGTGGCGGCNNNCNGNGGGTGGTCCCTTGGGGCGGTGATACATGGGTTGTCATCTTTCACCGCTCTGTTGGCCACGCCCCGGGGGTCTGT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGG#:FFGGGGGGGG#:B####::DFGGGGCFD#:BFGGGGGF#####3#88>BFGG##:>FFFFEDFGGGG##6#66BFGG,F@B#4;#68=>FGGEGE#2:CFG8CGFGG8FGGGEG5###2#2#19C5FGGGF=FFFGGGFGGED3>:CFG77>?FEGFFFB4C*0.)5(;)734:<*/79;B;;7042) +@M02542:108:000000000-AJUMM:1:1101:18702:1077 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCTCACCCGATTTGAGGTCAAGGTTTATAAAACTCTGTCTTAGATGCAAGACTGTTTGAAGCGGGGNCTGAAGCGACANTGNNNNACCCAAGACGTNGAAACATCTNNNNNCNTCAAGGATNGGCAAAGCAGACCNNANTAATCCATTTNGGNGGAGCTGGCTNCAAGGGAGGCCAGCAATGANNNANCNCCAAAGTCCAAGCCTTCCCCGGTCAAGAAACCAAGAAAGGTTGAAGGATGTTCACGACACTCAAACGGGTGTGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG#:BFFGGGGGGG#:B####::DEGGGGGGG#:DFFFGGGF#####:#88@@FFGA#:@CGGGGGGGGGG##6#66>CGEGGGG#6>#6>@CFGGGG=#4=FGGDGGGGGGGGGGGGG###2#2#21AFGGFGGGGGGGGFFFG@>CGGD4F=)7?@F>?4*47>2<<:1429)C<97>?:03196. +@M02542:108:000000000-AJUMM:1:1101:13069:1077 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTACCTGATTTGAGGTCAAACTTGTTTGTTGTTTTGTAAGGCAGAGCCATGATACTAAAAATTCNCTACCAAGAATNCTNNNNGAGTTGGATAANCCTAATACANNNNNANATCCTGAANGCACTATCTAGTACNANTCATGCCGATNCTTTTCAAGCAAANGCCTAGTCTGACTAAGAGTNNNANTNAATACCAAACCCGAGGGCTTGAGAGAGAAATGACGCTCAAACAGGCATGCCCTCTGGAATCCCAAAGGGCCAA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGFGGFF#:CFGF>()8FFF::(3>?5:::>BFD:<:2*09:C:17(8((4 +@M02542:108:000000000-AJUMM:1:1101:18098:1078 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTGCCTGATCTGAGGTCAAAGCGTTGATAACGATCACAAAGAGCTTTCGGGCAAGACCTAGTTCNCCATAATCCCCNTTNNNNAGCTGATCGATNTGTTACTATNNNNNCNGGTTCAAGNTGGGCTAGTAAAGGNCNCCACTTGTAGNAAGCCTAAAAAAANTTTAAAGCAAGCCGAAACANNNCNGNCAAGTGCTCACGAACCAAACCTAGTCAAGCCGCGAGGGCAAGACCTACCCCCCAAAGGGTAGGGCTTGAGAGTG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGF#:CFGGGGGGGG#:B####::DFFGGGGG8#:BFGGGGGF#####:#88FGGGGG#6AFGGGFGGGGGGG#8#86DFGGGGGF#8@DFCFGGGGGGE#4:>DGGFCEFFFGEGGDGG###*#*#*2*:7C@9CCFFE5EGFG4)>4C9::CF740573>:>B3C>=?0<:FFF<5;9B?:1161)1>B*(4(,382)) +@M02542:108:000000000-AJUMM:1:1101:12624:1078 1:N:0:4 +AATAAGACGATGAAGAACGCAGCAAAATGCGATACGTAATGTGAGTTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGAATTCCNAGGGGCACACCNGTNNNAGTGTCGTGAACATCCTTCAACNNNNNTNGGTTTCTTNACCGGGGAAGGCTTNGNCTTTGGGGGTNTTTCATTGCTGGCNTCCCTTGAAGCCAGCTCCTNNNANANGGATTAGTGGGGTCTGCTTTGCCGATCCTTGACGTGATAAGATGTTTCTACGTCTTGGGTTTCGCACTTTCGCT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGDEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFFGGGGGGGGGGGGGG#:=FGGGGGGGG#:B###::BFGGGGGGGFFFGGGGGGGG#####:#8@FGGGGG#3ADFDFGFG9FGDED#/==CGG,1C9CBFGGGGG6###2#1#*/*/:C9@CFCE:=FG?77=*>FG39DDF?2=43551FF7?<>AA.*01-9(,.4>*341)56(1( +@M02542:108:000000000-AJUMM:1:1101:20813:1078 1:N:0:4 +AACCACTCGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTNGCGGGCATGCCNGTNNNNGCGTCATTTCANCCCTCGAACNNNNNCNGGGGGTCGNCGTTGGGGATCGGCNCNCCCTCTGCGGNGGCCGTCTCCGAANTACAGTGGCGGTCTCGCCGNNNCNTNTCCTGCTCAGTAGTTTGCACACTCGCACCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAACTTTCTCA ++ +=FFC7C#6:D+@<+3++*3*3#6#466>@F7>FD#6:7:8:*44,:*=#44:;:CFEE8E1?*<7**:###/#2#**1*9E+<7?:3CCF*/**9647*9753;@(>@73<>D3)<*9;(3)?F1>16(4(4)54.9CFC<1A)26)) +@M02542:108:000000000-AJUMM:1:1101:15884:1078 1:N:0:4 +AAGCCTTGGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCNGAGGGCATGCCNGTNNNAGCGTCATTATACCACTCAAGCNNNNNTNGGTATTGGNGCCCGCCCACCAGCNGNCTCTAAAATCAGTGGCGGTGCCGGNCGGCTCTAAGCGTAGCAAANNNCNTNGCTCTCGGGTCCGGTCGGTTGCTTGCCAACAACCCCAAACTTTATTCGGTTGACCTCGGATCAGGTAGGGATAC ++ +CCCCCGFGFGGGGGGGGGGGGCEEG@:FGGC6C,BFFFGGFFGFGGA,CFFG?FGGFGFGFCFGG9EFD::AFFCF1>:7:#4**;*8BA,6:8?:5*BF+###2#*#*****+*39/9/*2>C>)17>F99AE:CCCF?=EC7###4#4#*2*:8C7=B;(55C=F8)0)7C>(227?.3B0448<<3(,)*0)4((-2()66) +@M02542:108:000000000-AJUMM:1:1101:9729:1079 1:N:0:4 +AACCACTCGATGAAGAACGCAGTGAAATGCGATACGTAATGTGAATTGCAGGTTTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTCTGGTATTCCNGAGGGTATGCCNGTNNNAGCGTCATTTCTCTCTCAAACCNNNNNTNTGGTATTGNGTGATACTCTACTTNTNTTAACTTGAAATACGGTTTTGGCANGGGTGTGTTAAACAGCCGTNNNCNTNGATAATGTATTAGGTTCTACCAACTCGTTATAGTGGAAGGCAGCGTTGTCTAGCATGTAAGCTCGGCCTAACA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG#:FDFGGGGGGG#:B###::DFGGGGGGFGGGGGGGGGGG#####:#8@FGDFFC#:ADADBFGGCFGGG#8#8@EFFGGGCEFFFGFGGGGFGGG<#5>:38CE@FFBEFAC>FG7###*#1#12C=FCFG79CD7CCCFGGFFFGGG7DGFA?CFFA:=6ADFE((.6>BF9F<9BAAB445=CD)/,4.41882 +@M02542:108:000000000-AJUMM:1:1101:16888:1079 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTACCTGATTTGAGGTCAAACTTTGGTTTGTTTGTTGTAAGGCCGGGCCTAATAGCAATCACTTNTTCCCACTATCNATNNNCGAGTTGGATAAACCTAATACANNNNNTNAACAGCTTNCACAAGAATTACTTNCNTTGCCAATACTTTTCAAGCAAACTNAAGCATATAACCCGAGTATNNNCNANCACCACAACTATTGTTTTGAGAGAGAAATGACGCCCAAACAGGCATACCCTGTGGAATACCACAGGGTGCAATG ++ +CCCCCGGGGGGGGGGGGGGGCFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGAFAFGGGGGGGGGGGGGGGGGGGGG#:CFGDGGGGGG#:?###::AFGGGGFFFGGGGGG8FGGE#####:#8@FFGDEG#::=DGGGGGFDGFF#8#838DCC,DCCFFGFFFGEFFGEE7#53D5:;,AECF:>>EEFC,###*#4#*2:EG5EFC<<9+)5;?((.87@F:F1:?(DFCFCGGGGGGGGFDC:>FGE#**>CD,>DFGCEGFGGFG,###4#4#22AFFFFFFFGCGGGDE5))1+33+;C::7?CFGF@?==7<18942;>B?FBBF.3449()9*.9392((5<). +@M02542:108:000000000-AJUMM:1:1101:12656:1080 1:N:0:4 +AACCAGTGGATGAAGAACGCAGTGAAATGCGATAAGTATTGTGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCNGAGGGCATGCCNGTNNNAGCGTCATTTCCCTCTCAAACCNNNNNGNTTTGGTGATGGGCGGTACTTCTTNANTGAAGTTCGCTTGAAATGAATCGGNACGAGCTGTTTTTGTGGTTNNNCNANTTTATTCAATGTATTAGGTTCATCCAACTCGTTGATTGACATGGAAACACCCAGGAACGTCCGGCTCTGCCTA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGG#:=CFG7=FGGF#:B###::DFGGGGGGGGFGGGGGGGGG#####:#88FFDEGGGGGGGGGGGGGGGGG#+#88DCGGGGGGGGGGGGGGGGGGGG#4>DCFEGGGG9BFGGFGGG###4#*#22ACFGGFGGGGGGFDFGGFFDGGDGG6AF;FFFF=A@=FFF2124?FF?30:FBB?::3@B?<>(05CFE)8<7>B;1@B<91>D?B?BCD@<:<:0:?FB +@M02542:108:000000000-AJUMM:1:1101:12904:1081 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGATCAAACATTCGAGAGGTTTTCCTCACTGGGGAGAGACATTTGTAAGCTCNAGCGAACCTCCNTTNNTGAAGGATACCTGGCGGGAAACCNNNNNCNTAGATAGTTATCACCTCTGTCACNCNCCCAAACACTGGCAAGCTGATTCATCTGAGAGGAGCCGACCACTNNNCNCNAAAACCCCCAGCGTCCAAGCTCATCATGCTAAACACTGAGAGTTGAGGTCATCATGATACTCAAACAGGCATGC ++ +CCCCCC:FFFGGD@,=F#####+#+8@F@@,,,7#6#*63>DAFCGGGG7:E**>>,D7D:9,22;,?,/<*:=**=58E+###2#*#*1*295:*95*1*CE))0*8)2**0*?***.*8C4))**29+.6<2;4F0).-5:4<).-*2:/:42(,-3:?2 +@M02542:108:000000000-AJUMM:1:1101:18473:1082 1:N:0:4 +AAGGCCATGATGAAGAACGTAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATCCCNAGGAGCATGCCNGTTNGAGTGTCTTGAAGTCATCAACCTNNNNNGNTTCGTTCGGGCTGCCGGTTGGATNTNGGGGCATGCTGCCGTGAGGTGGCTCGCCTCAAATGCTTCGGTTGNNNCNGNGGGTCGCACTCGACTGGGCGTTGTACCATCCTCGCTCCTCCGAGAGACGTTCTCCACTTATCGAGTCCTCCCT ++ +CCC@CF8<58CB*1>*/26;;B;;B1=*1::###/#2#22/29C*=5>8E***/0>95>)1***0*/<(66C5>6.?CFG>0;(.772)44))),))6*293*)(44<<47 +@M02542:108:000000000-AJUMM:1:1101:17928:1084 1:N:0:4 +AACCAACTGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCTATTCCGAGGAGCATGCNTGTNTGAGTGTCATGTTAATATCAACCNNNNNGNTTTTTAACTATTGGGTGTTGGACNTGGAGGATAGTGCTGGCTGCAAAGTCGGCTCCTCTTGAATGCATTANNNTNGNACCTGTGCGCGTTTGCTAGCGGTGTAATACATTTTATTCACCACGGGCCGTGTCACTATTAGGGTCTGCTTCT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGEGGGGG7DFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9F@FFGGGGGGFFGGGDGEFFGGGGGGGGGGGFGGGGGGGCGGGD@FFGF#4B4#:BBFFFGGGF9AE<:BBECDFAFFF>ECGGGCFFG9E:FGFFGG5###4#1#*2*CGGCGCEG7EEGFFFC;BGGGDCFF=F3AFGFFEFF>7C<6:>@@>9>9:79924467>F@GFFFF>A>4 +@M02542:108:000000000-AJUMM:1:1101:12940:1084 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTACCTGATTTGAGGTCAAACTTTGGTTTGTTTGTTGTAAGGCCGGGCCTAATAGCAATCACTTCTTCCCACTATCNATCNACGAGTTGGATAAACCTAATACANNNNNTNAACAGCTTTCACAAGAATTACTTNCCTTGCCAATACTTTTCAAGCAAACTCAAGCATATAACCCGAGTATNNNTNANCACCAAAACTATTGTTTTGAGAGAGAAATGACGCTCAAACAGGCATACCCTGTGGAATACCACAGGGTGCAATG ++ +CCCCCGGGGGGGGGGGGGGGFGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGDGGGGGGGGGGGGGGGCGGGGGGFGGGGF#:BD#:DDDFGGGFFGGGGFFGFFDFGG#####+#88DEFGFGGGGGGGGGGFGGGGG#8D8DGGDFGGDFGGGGGGGFFGGFCFCFFGGGGGGGGGGEDE5DF:###*#1#**449?,A6BE3>EFFFG4*(/=@??579(),3<)334)9DFC(-((,4665 +@M02542:108:000000000-AJUMM:1:1101:15371:1084 1:N:0:4 +AACCACTCGATGAAGAACGTAGCAAAATGCGATAACTAGTGTGAATTGCATATTCAGTGAATCATCGAGTCTTTGAACGCAACTTGCGCTCATTGGTATTCCAATGAGCACGCCTNTTTNAGTATCAAAACAAACCCTCTATCNNNNNCNTGTTGAATAGGATGACTGAGAGTNTCTTGATCAATTTTGATCTCGAACCTCTTGAAATGTACAAAGGCCTNNNCNTNTTTAAATGCCTGAACTTTTTTTTATTATAAAGAGAAGCTCTTGCGGTAAACTGTGCTGGGGCCTCCCAAATAA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG@FDEGGDCDGGGGGGGGGGGGGGGFAFFEDGFGGCF#:BF#:CFDFFGGGGGGGGGGGGGGGGG#####:#99DFFDFFGGCEE?EE5C6?<>2<)::?)<).*.421(4:) +@M02542:108:000000000-AJUMM:1:1101:8733:1084 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAGGTCAACCATAGAAAATTGGGGGTTGTTGGCCAGCATCCACCGGGACCCTGTAGCGAGAAGAATTACNACGCTCAGAGCCCGACGGCACCGNNNNNGNTTTTAGAGCCCGCCGGGTGAGCGNCGGGGCCCAACACCAAGCATTGCTTGAGGGTTGTAATGACGCTCGANNNGNCNTGCCCCTCGGAATACCAAGGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGCAATTCACATT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGFGCFFFDGGGGGDG?FGDGGGGCEGGGGGGGDFFFDGFGDGG@FGGGGGGGGGGGGGCCFDFGGGGGGGGDGDEDEFGFGF,C=C>F?E,CDF<#4BCB=?FE<>B,BF>:FEEEGCE#####5#66@:@,>EFGGGGGGGDGDFGCE#1*8BC88:CCFFGCC***DEB>76>)<692:@F94>AAFAF92<< +@M02542:108:000000000-AJUMM:1:1101:17542:1084 1:N:0:4 +TTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTATGGTACGCTGGACNTTGNAGGATACCCTCGCTTTCCTGCTCNNNNNGNGTTTATTGCTGCCGTCATTGCTTNTTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAANNNGNTNAATTTACGGAAAACATTATTACTGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCTTGCGT ++ +CCCCCFGGGGGGGGGGGGGGGGGGGFDGGGGGGGGGGGEGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGDFGGGGGGGDFDFGDFGCGGGGGFGGGGGGCFEF#:BA#4:FFGGGGGGFCECGGFDGDDC3EGGGFFGGAF7:+*9C77>>5)9B>BBEGE54?)795C:944:<20, +@M02542:108:000000000-AJUMM:1:1101:17203:1085 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCCACCCGATTCGAGGTCAAACTTTGAGTAAATTGTCTCGCGACGATTAGAAGCGAGGAACAAAGTCCGCGAGGCGTNGACNATTATCAACGTCGCACGTGCTTCNNNNNTNGCTAATGCATTTCGAGACGAGCCNATCTCACGACCGGCAACGTCCAAATCCGCTTCCCGGCGTATCGCTANNNCNTNGGCGAGGGTTAACGTGACACTCGAACGGGCGTGCCCCGTGGAAAGCCACGGGGCGCAAGGTGCGTTCAAAGATT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFGGGGGGGGGGGGGGGGGGGGGGGGG#:=B#:BFGGGGGGGGGGGGGGGGGGGF#####6#66DFFGGGGGGGGGGGGGGGGGG#6DFB@C>F<:<6?FFF(892909(432027)*3:(.))(). +@M02542:108:000000000-AJUMM:1:1101:22194:1085 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCTCACCCGATTTGAGGTCAAGGTTTATAAAACTCTGTCTTAGATGCAAGACTGTTTGAAGCGGGGTCTGAAGCGACANTGCNAAACCCAAGACGTAGAAACATCTNNNNNCNTCAAGGATCGGCAAAGCAGACCCNACTAATCCATTTAGGAGGAGCTGGCTTCAAGGGAGGCCAGCAATGANNNANCNCCAAAGTCCAAGCCTTCCCCGGTCAAGAAACCAAGAAAGGTTGAAGGATGTTCACGACACTCAAACGGGTGTGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG#:=D#:=FGGGGGGGGGGGGGGCFGGGG#####:#88FGFGGGGGGGGGGGGGGGGGG#*@DGGGGGFGGGGGGGGGGGGGGFGFGG9FGGGGGGGGGGGGGGGF###2#2#21CEFGGGGCFFGGFGF795:39D7FD>FF:FFF:FB?FG?E:?A>6F42@BF>A??BBB6CFF728:0;6>B5 +@M02542:108:000000000-AJUMM:1:1101:21695:1085 1:N:0:4 +AACCAACTGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCTATTCCGGGGAGCATGCNTGTNTGAGTGTCATGTTAATATCAACCNNNNNGNTTTTTAACTATTGGGTGTTGGACNTGGAGGATAGTGCTGGCTGCAAAGTCGGCTCCTCTTGAATGCATTANNNTNGNACCTGTGCGCGTTCGCTAGCGGTGTAATACATTTTATTCACCACGGGCCGTGTCACTATTAGGGTCTGCTTCT ++ +CCCCCGGGEFGFGGFGGGGGGCEG76CCFGGE@FBFGCCGGGGGGFGFDGGGCFGGFGECFEGGGFG@FG8FFGGGCEECEFCFEGF8FGGGGGGGGGGF9FGFFEGDFFGFGGG#:AB#:B=DDFGEGGGFF:>EFGGGGGGGGGD,###4#*#33ACGCEFGGGFEF?7+BFFFGC+=CGFF+8C4CFF1F>457=?E;FFFEFE?FF;CCCFF7C:475?CEE48) +@M02542:108:000000000-AJUMM:1:1101:16808:1086 1:N:0:4 +AAGCCTTGGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTNGAGCGTCATTATACCACTCAAGCNNNNNTNGGTATTGGGGCCCGCCCACCAGCGGCCTCTAAAATCAGTGGCGGTGCCGGTCGGCTCTACGCGTAGTAATNNNCNTNGCTATAGGGTCCGGTCGGTTGCTTGCCATCAACCCCCAATTTTATTAGGTTGACTTCGGATCAGGTAGGTATAC ++ +CCCCCGGGGGGGGFGAFGGGGGGGGGGGGGGGGGEGGGGGGGGCDFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGEGGGGFGGGFGGGFGCFGGGGGGGFFGDGG#:BFFGGGFGGFGGG,EEGFGGGF#####:#86D@FGGGGGG:CGGDEEEGG,D7FFGGGFGF9>F@>>@@CEEEEEG?CGGGCE>58FG+*=883:E9;:###2#*#11:=>+CCFEF55EGG3D55>DGFC3CC*<2?@45>(.07@+.:>AB=FFF?7<)-.4(2><*?C<)4?-66). +@M02542:108:000000000-AJUMM:1:1101:17974:1087 1:N:0:4 +AAGGTCTAGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCGTGGCTTTCCACGGGGCACGCCCGTTNGAGTGTCACGTTAACCCTCGCCANNNNNGNAGCGATACGCCGGGAAGCGGATTTGGACGTTGCCGGTCGTGAGATCGGCTCGTCTCGAAATGCATTAGCGNNNTNCNAAGCACGCGCGACGTTGATAATTGTCTACGCCTCGCGGACTTTGTTCCTCGCTTCTCATCGTCGCGAGTCAACT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG#:BFGGCGGGGGGGGGGGGGGGG7#####:#86@FFGGGGGGGGGGGGGGGFEGGFCCFGGGGGGGECGEGGCEFFGFGGGGGGGGGGECCGG7CF7@FGFGG7>F?)3;@D3>(<5539<<6C8,@EGGE###4#4**3=B6C+,*19)335(.60813)7))+1*)21?573()(6 +@M02542:108:000000000-AJUMM:1:1101:21567:1087 1:N:0:4 +AATAAGACGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCACTCCTTGGTATTCCGAGGAGTATGCCTGTTNCAGTATCATGAGAACTCTCACACNNNNNCNTTGGGTTTATGGCGTGGAATTGGACTGCGCCGACTGTCATGGTTGGCGCTTCTAAAATGTAGTTCTTGGCNNNCNCNTAATACAGCAGTTTGGCCTAATAGTTTTGGCATTCATTGTCAAATCTTTGCCTAACATCTGCTCAAGGAGTT ++ +CCCCCCEFCGGGGGGGGGGGGG@FGEGGGGEFGGGGGGAGGGCGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGCFEG9EEF4FGGGGGGGD#::?DCEGGGC,5,CFFGGGGCFF#####:#84AFFG>:1DC9CDFGC;DFEFGF9C6###4#4#21/C3E<966*49C+*);>;AF77C7::=E;4A78+5@=7+=<5A??7=4*5A)).))).0**9*24)((.( +@M02542:108:000000000-AJUMM:1:1101:14971:1087 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGAGTCATAAAGTTTATTATTGTCCGGTAAGGACGATTAGAAGCAGACCCTAATAGTGACACGGCCCGTGGTGAATAAAATGTATTANNNNNCNAGCAAACGCGCACAGGTCCAAGCTAATGCATTCAAGAGGAGCCGACTTTGCAGCCAGCACGAACCTCCAANNNCNACATCCAATGGTTAACAAAAACCATCAGAGTTGATATTAACATGACACCCAAACAGGCATGCTCCTCGGAATAGCC ++ +CCCCCGGGG@FFGFGGGFGGGGGDFGGGGGGGGDFE@FGGGGGGGGEEFDFCFGGGDDGGGGFFGGFGFFGGGGFFFFGGFEEFGGGCCEC5CGGGGFGFCFC:B8DCEGG=6CFCC###1#*1/>EF4<9))4))2*3((.,0/=2*,,((((--(0)))*6,(-(().( +@M02542:108:000000000-AJUMM:1:1101:18983:1087 1:N:0:4 +AACCACTCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGGTTTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTCTGGTATTCCGGAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAACCNNNNNTNTGGTATTGAGTGATACTCTACTTGTGTTAACTTGAAATACGGTTTTGGCAAGGGTGTGTTAAACAGCCGTNNNCNTNGATAATGTATTAGGTTCTACCAACTCGTTATAGTGGCAGGCAGTGTTGTCTAGCATGTAAGCTCGGCCTAACC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFEGGGGGGGGGGGGGGGGGGGGGDEGDGGGGGGGGGGGGFGFGGGGGGGGGGGGGGGGGGG#####:#8@FFFGGGGGGGGGGGGGGGGGCFGGGGDDFGGGDF9FFGGGGGGGGGGEGGGGGGCEGGGFGGGGGCG7###4#4#22=EGFGGGGGGGFGG4>FF6;CGGGGC>3?AFFFA(8=D3F??>AF@FDF>94).-:>CEGFG7FCFFF###4#44:DEGGFGF<:?.6<<)6196?:54:A?03(, +@M02542:108:000000000-AJUMM:1:1101:16263:1088 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGCCAAAGCTTTAAAGTATATTGTCCGCAAAGACGACTATAAGCAGCACCACTGAAGAAGTCCTTGGGCTGTGGCGCAGATAATTATCACANNNNNGCCGGGCACTCTAAAAAGCGCAAGCTAATATATTTCAAGACGAGCCTACTACGGCACAGTCCAAATCCACCTNNNCNAACCGAGTCAACGATCCGAAGGGTGAAGGTTTACGTGACACTCAACAAGGCATACTCCCCGGAATACTACGGAGCC ++ +CCCCCCFGGGFGGGFGFGCD*:BCG,6>,;CE7:FGFF,###/#*42:7:3C6F:CDG5;E5;75..>F:F)07F7()(.))4/4?).,((-()119D).61,:0(( +@M02542:108:000000000-AJUMM:1:1101:21364:1088 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACCTTTGGTTCCGCCGCTGCTGCGGCGCGTCTAGGCATGTGCCCAACCCGGCCCCTCCAGAAGGCGAGATGTAACTACTGCGCCCGNNNNNCCAGAGGGTCCGCCACTGTATTTCATGGCCTACGGCAGCCGTAGGGGCCCCAACACCGAACCCCGGCGGCTCNNNGNGGGCAATGACGCCCGGACAGGCATGCCCGCGCGAATGCCGGCGGGCGCAATTTGCGTTCAAAGACTGCATGTCTC ++ +A@CC@;CCF@@F9CF9,CFGCF@F-EFGF<6CGGCEGFGCE,,,;,6@,,;B++B,@E6C,CF9@CCCF@C,@+7@@@FE7:BF=>@F7+,,,,,9F9,5E8+BFCFGD+4+:BC,,:3=F8@++8BDDGFCG,>CFFEGGG7#####656*@:<7>:DFG*>CFCCGFFGG,,@B=EFCE7FFEG7F8*:**:B==EGG*8;8E5CCGG>*/8*:5EC5###2#*/9*2/*0<@DC)2*/*95D*7)*22>*770.7)05?=)>33@C6;B()7))/64(7((.6)/07@*()-6.64) +@M02542:108:000000000-AJUMM:1:1101:17637:1088 1:N:0:4 +AAGACTCTGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAACTCAGTGAATCATCGAATCTTTGAACGCATCTTGCGCTCCTTGGTATTCCTTGGAGCATGTCTGTTTGAGTGTCATGAAATTCTCAACCTNNNNNGGTTTGCTAGTCAGATCTAGGAAGGCTTGGATCATGGGTGCCTGCTGGAGGCCTTGTGTCATCAGCTCACCCNNNANAAATCAGTGGCACCGCTTAGCTTGGTGGCTTGACCTGATGTGATAGACTTATCATCATGGATCTTCTTCATTGA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFDFGGGEFGGGGFGGFGEGGGA#####:4ADFDGFGGGGGGGGGFGGGGGGGFGFEE89DCGGGGGGGGGGGGGGGGGGGFGGGGFFCFGGGGFGGGFF###4#449CGG8EEEGGF5C>EGFGGFFGGGF5C4A4BA6DFFFFFCFFE3>ECF+?:5CE?)9;ECAFG6CE3));EG5:ACD8@FEGGFFGG==CCG+##12#12>CCFGC+1+=DGGFCF4C7==7:EGGG=DFGGGFG+BEEGGG>*4>FG7B9,DFGFGGGCC6C###4#44:C*C3EEGGGGG*7CDBD95BGGD>>DG*8:D@0)/63./)C>(4455*5=:<00,),(()944:2<9A46)46 +@M02542:108:000000000-AJUMM:1:1101:19348:1090 1:N:0:4 +AACCAACTGATGAAGAACGCAGTGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTNNNNNTCTTTCATTAGGAGTGCGGCGGATTGGATATGGGGGTTTGCTGGTTTCTAACGAGATCAGCTCCTCTGAAATNNATNAGCAGAAACCGTTTGACTTTGGCTGCTAGGTTGTGATAATATCTACGCCTTGGTAGTTGGGTTGGAATACGAGTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDFGFGGGGGGGGGGGGGGFGGGGGGGGGGGGEFGGGDFGGGGGC#####:9AEGGGGFGAEFDECFD7FGGGGGFGGFDGGFFGGGGGDGGDFGGGGGGGGG88C5ACCFFDFFFCFFC?C##*/#*29C5C4FGGG5DFGGGGF70;AFDDGF7D**.7BDFF)==*/3.6((.752?74FEFDFFCFGGGGC3#####:38>FFFFCGGGGGG:EF**B7,266=F89BC8C8E9E9+<9C9+>CGGGDE588:=?****2;#*/#*/1CCE*C)=*9>6*7*74(07*0=ABFG*3)((.7788)(,(2:<(-)5 +@M02542:108:000000000-AJUMM:1:1101:13963:1090 1:N:0:4 +AACCAACTGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGTTAATATCAACCNNNNNGGTTTTTAACTATTGGGTGTTGGACTTGGAGGATAGTGCTGGCTGCAAAGTCGGCTCCTCTTGAATGCATTAGNTTNGGACCTGTGCGCGTTTGCTAGCGGTGTAATACATTTTATTCACCACGGGCCGTGTCACTATTAGGGTCTGCTTCTT ++ 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+AACCAACTGATGAAGAACGCAGTAAAACGCGATAGTTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCATCGGTATTCCTTTGGGCATGTCTGTTTGAGCGTCATTACAACCCTCAGCGNNNNNTGGTTCTGAGCGCGAGGCCCTGCTCTGGCTGGGCCCCCGCTTCAAAGTTGCACGCTCTGCTGACCGCTCTGTCNCANCGAAACGTAGTAGAAATGCCCCGTTGAAGGTTGGCAGATGTGGTTCGGCCTGAACAAAACCTGACCCTAAGGTTTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGE#####+8AFGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGEGGGGFFFGGGGGGGGG9#2*#2:95CEGGFGGDFGGFGGF@FFF4-388?308DF)0(((.(6)6( +@M02542:108:000000000-AJUMM:1:1101:15878:1091 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTGCCTGATCTGAGGTCTAATCTTAAGAATGACTAGATGGGTTTGAAGCTTCTAACTTTTCATGTCTCGGCCACTCTGAAAAAGTGTCCTCAGCGAATAGTCTANNNNNCTGAGTCAATCCGATTACGAAATTGAGCTGCTAATGTATTACGAGCGAGCTAATTACATAGCAGCGTTCAAAANCCNAACACCACAGCAGTTCAACAAGGAACCGGTGGGTTGAAGAGTTCATGACAATCAAACTGGCATGCTCTCCGGAAT ++ 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+AACCGAGGGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACNNNNNCGGGGGGTCGGCGTTGGGGATCGGCCCTTTACGGGGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCCNTCNCGCGCAGTAGTTTGCACACTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCCAAACTTCTGAAATGT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG#####:8>CEGGGGGGGGGGGGCGGDGGGGGGGGGGGGGGGGGGGGGGGGGGDFGGGGG7:CCEEEGGGGGGGE8EF*#*2#*29FGGGGGGFFGFFGGGF4C:@DGDCDGDBBBD35>39DFDD554??>57(.16>AAB7A>6 +@M02542:108:000000000-AJUMM:1:1101:10090:1094 1:N:0:4 +AACCACTCGAATGAAGAACGCAGCGAAATGCGATAAGTATTGTGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGCATTCCAGAGGGCATGCCTGTTTGAGCGTCATTTCTCTCTCTAACNNNNNGGTTTGGTGTTGAGTGATACTCTTGGTTACAAACTGATTGTTTACTTGACAAGAATTGTCGAGGGTTGTTTTTNCTNGTACTGCAGTCCGTTTATTCAATGCATCAGGCTTAACACCTCTTTGACTGCCCTCTGTCTAGGTTGGCTCTTACTC ++ +CCCCCFGGGGGGGFGGFGGGGGGGEDCEGGGGECFG,>,=E,E,,@D8,3@B,,,4*4***,4*6*;71*2/)6=/7/@4BFD*=))7)8+)().4:044)4)*20.),,),))).- +@M02542:108:000000000-AJUMM:1:1101:15541:1094 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAGGTCAACCTTTGGAAGTGTGGGTTGCTGGCGGGCACGCGCCCGGTCCCCATAGCGAGAGTAGTTACTACGCTAGGAGCCGAACGGCGCCGCNNNNNCGTTTGAGGCGTACCGCGCGCGGTACCGCCCAACACCAAGCAGCGCTTGAGGGTTGTAATGACGCTCGAACAGNCANGCCCCCCGGAATACCAGAGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACCGAATTCTGCAATTCACATTACT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGDCBFGGC#####46@BFFGGGGGGGGGGGGGGGGGGGGEEGGGGGGGCC>FGFGGGGGGGGGFGDC#**#229FDCDEG5CGGGF6ED>GGF@37C3CC7@E?DBGFBAFFGFGFFBA??FFFFFF64FGD5.)))7>DCF**0<)33)*/*(1**)0(,-)*9FA@63()),.4:F77/7624))-))) +@M02542:108:000000000-AJUMM:1:1101:10002:1094 1:N:0:4 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGCFEEGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGDGGFFGGFGGGGGGGGGGGGGGGGGGCEGGGGGGDFFGGEGGGGGGAFFFEFECGGFDGGFGGEGGGG@FFGEG#####:8>DFCEGDGGGEGGGGGGGGGGGGGGFGGGGGGGDGGGGEGDEGGCC97+9<+:C5=/5*2<>E=CGC:FGF#/:#*2*1C*7+332DD5>537>;@)))04.81)142:()0.()).,:3((13)*0<:)-6:2).4. +@M02542:108:000000000-AJUMM:1:1101:11525:1095 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTGCCTGATCTGAGGTCAAAGCGTTGATAACGATCACAAAGAGCTTTCGGGCAAGACCTAGTTCACCATAATCCCCGTTCCGTAGCTGATCGATATGTTACTATNNNNNCAGGTTCAAGGTGGGCTAGTAAAGGTCACCACTTGTAGAAAGCCTAAAAAAATTTTAAAGCAAGCCGAAACAANGCNGACAAGTGCTCACGAACCAAACCTAGTCAAGCCGCGAGGGCAAGACCTACCCCCCAAAGGGTAGGGTTTGAGAGTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGG9#####:8FFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGFGGGGGGGGGGGGFGFGGGGFGG5?GGG8,=#*4#*4*CFCDGG;CFGGGGG5FGGFFG4CDD7D44;:>D@>0;DGFGB?:39;F?3;>;(((20,7DC@*(-(44,24) +@M02542:108:000000000-AJUMM:1:1101:17556:1096 1:N:0:4 +AACGCGTTGATGAAGAACGTAGTGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGTATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACNNNNNTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGAAAAGTATTGGCAAGGGAAGTAATTTTTNTGNAAGCTGTTTATTCAATGTATTAGGTTTATCCAACTCGTTGATTGATAGTGGGAAGAAGTGATTGCTATTAGGCCTG ++ +CCCCCGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGDGGGGGGGGFGGGGGGGGGFGGGGGGGFGGGGGGGFFG<#####:9AB=CEGFGGFGGGGGGGGGGGEGGGGFGGFGGDF7F7FFG8B6BFFGEFFF48@E8<<<:A4;A1;3(69;6?6;7@:?E<6936.= +@M02542:108:000000000-AJUMM:1:1101:17278:1096 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAAACTTGTTTGTTGTTTTGTAAGGCAAAGCCAAATATACCAAAAATTCACTAATAAGAATTCTCAACGAGTTGGATAAACCTAATACNNNNNAAATGTTCCTAAAAGCACTATTCAGTACGACTCATGCCGATACTTTTCAAGCAAACGCCTAGTTCGACTAAGANTANCACTCAATACTAAACACGAAGGTTTGAGAGAGAAATGACGCTCAAACAGGCATGACCTTTGGAATCACAAAGGG ++ +CCCCCGGGEGEFGGGGGGGGFGFGGGGGGGGGGGGGGGGFGDGGGFGGGGG9FGGCGGGDFCFGFCGGFCFGGGCFGFGGGFFA@6<C?E,7@FD5@AE6@>#*4#*4;@E69BFG7:74<,=25:C)/;C5+886).(96DFF)))1):)7;;5.537().(-4).2/****..).,(, +@M02542:108:000000000-AJUMM:1:1101:8812:1097 1:N:0:4 +AAGACACCGATGAAGAACGTAGCAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACNNNNNCGGGGGGTCGGCGTTGGGGATCGGCCCTCCCTCTGCGGGGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCNGCNCCTCCTGCGCAGTAGTTTGCACACTCGCACCGGGAGCGCGGCGCGTCCACAGCCGTTAACTACCCACCTTTCTGA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGACGGGGGCCFGGGGGGGFGGGGGGGGGGGGGGCFGGGGGGGGGGGGGGEGGG7CCFG#####:8@ECGGGG5EGGGGGGEG55ACCC5:EGGDGFGGGDG5EDCGGGGFGEG58*;?FCFGGGCED5CEG?>CEE#*2#*2/7CGFFCEDGDFGF?FFG>6@F*9CD)C5>(75C3>E92(,0=91>:>84(,)))/9*9*(.)))).6 +@M02542:108:000000000-AJUMM:1:1101:12818:1097 1:N:0:4 +CCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGAGTCATAAAGTTATTGTCCGTGAGGACGATTAGAAGCAGACCCTAATAGTGACACGGCCCGTGGTGAATAAAATGTATTACACCGCNNNNNAACGCGCACAGGTCCAAAGCTAATGCATTCAAGAGGAGCCGACTTTGCAGCCAGCACTATCCTCCAAGTCCAANACNCAATAGTTTAAAACCGTCGGGGTTGATATTAACATGACACTCAAACAGGCATGCTCCTCGGAATAGCCAAGGAGCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGCFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGGGGGGGGFDFGGGGGGGGGGF#####:8DFGGGGGGFFGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGFFFGGGGGGGGGCFGG>EBGECGGCC?#/4#4=CDCGCEEGGGGGGDGC:DGABDDGGGGGF429@7BFFFFGFGAFBB>FF?5744:(8(395DGFFFFB??0(4, +@M02542:108:000000000-AJUMM:1:1101:10992:1097 1:N:0:4 +AACGCGTTGATGAAGAACGTAGCGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACNNNNNTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGAAAAGTATTGGCAAGGGAAGTAATTCTTNTGNAAGCTGTTTATTCAATGTATTAGGTTTATCCAACTCGTTGATTGATAGTGGGAAGAAGTGATTGCTATTAGGCACG ++ 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+CCCCCGEECEEGGGGGGGGGGGGFFGGGGGGGGG@FGFGGGGGCGGGGGGGAFGGGGGFGGGGFFFGGGGGGGGGGGGG:FFDGGGFFDFFEGGEGGGGGGGGFFGFFGGCFGGGFGGGCECGGGF,BFEFGCFGEGCGCFGF##:#::FFC9>FFFG7FG@FFDFFGGGAFGGGGDGGFGFE@FGFB@:5CE8EEGG:CEGCC+=:F652BF9@FGGCFF#1*#/29*7EG5*19C6CCCC4@CFFFD**>*:**),9BG5)30)97*(..(07>>:14A)3420<)/1.143(((((-( +@M02542:108:000000000-AJUMM:1:1101:14466:1102 1:N:0:4 +AACCAACTGATGAAGAACGCAGTAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGTTAATATCAACCNNGNNGGTTTTTAACTATTGGGTGTTGGACTTGGAGGATAGTGCTGGCTGCAAAGTCGGCTCCTCTTGAATGCATTAGNTTNGGACCTGTGCGCGTTTGCTAGCGGTGTAATACATTTTCTTCACCACGGGCCGTGTCACTATTAGGGTTTGCTTCT ++ 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+CCCCCGGGGEGFGFGGGG7FGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGG@FGGGGGGGGFGGGGGGGGGDE=FCEFCEDGGGGFFGGGGGCBB5FG8F7BFGCBFGGFEGDDFGGGGG9FAFCGGGCFFGG##:#:@@@F7DFEGGGGGFGFGGEED:FE<:,CEGGDGGCBCE8*8*6BEEG6CF9EE5:CC8/AC*2/#12#21595:*++09:F7EC9*9CG?FC6C<71>47,7)CB>?4>D)*(36<:FF<>?(,496).(9F*0>>FGFFFG:E7EEFEEEEECEG8B;9,;;FG@FCFCC,,=5:#/4#22*57CFGF*>=D7C5CD:77>FGDDDG>>F=16:2:B*)6))).:)) +@M02542:108:000000000-AJUMM:1:1101:15204:1104 1:N:0:4 +AAGACAGAGATGAAGAACGTAGCAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCGTGTAATTCTCAATCCNNTNTGGTTTTGAATCAGACGTGGCTTGGATTTGGGAGCTTGCTGGTACCCTGCATTGTGGGGTTCGGCTCTCCTTGANTGNATTAGCTCGGTCACGTTAGTTGCCCGACGGTTCACGGTGTGATAGTCTAACTTCATCGCCGTTGTTACCGCCTCGG ++ +CCCCCGGGGGGGGGGGFFGGGGGGGGGDADEEFGCEEGFDGGGGFFFFFEDGCFGGGGGGGGGGGGGGGGGCECDCFEEFA,3ED8B;A,3E8,,@D9CC+BGG5CGEGGG,?F?GF,#*4#44:DG?+7C5CGC7EFG*8:F++:;<):DG274==C>>6BEGFE96).6@@>=))6)5:1(,751.*5<:0(((,1 +@M02542:108:000000000-AJUMM:1:1101:18657:1104 1:N:0:4 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+CCCCCGGGCCFEGFFGFFGGGGFGGGDGGGGGGGGGGGGFGGGGGGDGGDGGGGEGGGFEGFFGGFGGFCFGGGGGGGGGGGFEGDGGGGGGGFGGGE77>FGGGGGGGEGGGGEEGEEFGGFCBFE9,+>::@:C#86#+:8DCFEGGGGCF7FGFGFGGGCFGGFCDEGBEGF7CFC88BC>FDDEGGFE07/#119:(9?*.67>555*((-(0816?:?6634)6(7:0>C(-48))).) +@M02542:108:000000000-AJUMM:1:1101:15241:1106 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCTTGCTTGATTTGAGGTCAAACTTTAAAAAAAGTTGTTTATAACGCCAAAGCATTGAACTCCAAAAACTTGAATTAACAGCAATTCAACATTCCAACGAGTTGGTNAANCCTATTACGTTGTAATTGAAATAGCCTTCAACTGGAGTTCGCTTTTGCCAAATTCATTTCAAGTCATTCTCATAAGANAAATAAACTCAAGACTAAAACAAAATACATTGTTTTAAGATTGAAATGACGCTCAAACAAGCATGCCTTCTGGAAT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGF#9D#:ADFGGGGGFFCFFDGGGGGGGGAGCGGFGGG9@DFFFFGGGGGGGFGGGGGGGGGGGGGGGGGDGGGGGGFDCCF<#44@FFFCFE6C7CFGGGFFGGFFCF>CFFGAB?FFGFF38FCA6>9?;FA3()64;43,=((2;:)*9;<24<23) +@M02542:108:000000000-AJUMM:1:1101:19703:1107 1:N:0:4 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+CCCCCGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGFGGGGGGGGGGGFGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGEEEGFGGGGGGGGGFGGGGGGGGFGGGGGFGFG#8A#:A@GGGGGGGGDGGGGGGGCFGGGGGGGGGGGGCFGDGGEEGGGGFFCFGFC5:<=CEGGGGCGDC6FGGGGGG:*+#129CCGGGFFFGDEGE6CBGGFFG>CDDGG4@<*?:>9B9)2:( +@M02542:108:000000000-AJUMM:1:1101:21132:1107 1:N:0:4 +AACCAGTGGATGAAGAACGCAGTGAAATGCGATAAGTATTGTGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCAGAGGGCATGCCTGTTTGAGCGTCATTTCCCTCTCAAACCNTCNGGTTTTGGTGATGGACGGTACTTCTTCAGTGAAGTTCGCTTGAAATGAATCGGCACGAGCTGTTTTTGTGGTTTGCCNAGTTTATTCAATGTATTAGGTTCATCCAACTCGTTGATTGACATGGAAACACACAGGAATGTCCGGCTCTGCCTA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGFGGGGGGGGGGGGGGGGG#4:#:ADFGGGDEFGGGGGGGDGGGGGGGGFF=EFGGFFGGGGGGGGGGGGGGGGGGDEEGGGGGFGFFGGCFFEGGGGCF#*4//5BFGG,=FFGGGGGFFGF4CF++6C5D)((5-8>?) +@M02542:108:000000000-AJUMM:1:1101:22605:1108 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAATTGTCAAAGTGTATGCGCATCTAAAGAGACACAGCAGATTAGAAGCCGGCAGGCACAGGCACCGAGGCGGTCACAACGGCGATGANGTNAGACTATCACACCGTGAACCGTCGGGCAACTAACGTGACCGAGCTAATGCATTCAAGGAGAGTCGAACCCCACAATTNAGGGTACCACCAAGCCCCCAAATCCAAGCCACGTCTGATCCAAAACCAAACGGCATTAAGAACTACACGACACTT ++ +CCCCCGDGDGEGGEFGGCAEAEFDEEDEDGGGG@FB@E6CE@@FEGC<=B:7==CCFD#8:#::+@EGA<7?<<++8;*A+C5EGF5*;8E*7*+#/***2C7<9+957*:*:9>/*:>0792-.)-.0*2)*:0,14-)) +@M02542:108:000000000-AJUMM:1:1101:15837:1108 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTGCCTGATCTGAGGTCTAAGACACAGATTGGTGACAAATGTCATCAAGAGTTAGAAGCAGCAATTGCATCAGCTGAGGCCCTTCAATGAAGAAGATCCCTGATNATNAGTCTATCACATCAGGTCAAGCCACCAAGCTAAGCGGTGCCACTGATTTATTTAGGGTGAGCTGATGACACAAGGCCNCCAGCAGGCACCCATGATCCAAGCCTTCCTAGATCTGACTAGCAAACCATAGGAGGTTGAGAATTTCATGACACTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGFFGG@FGGGGGGGGFGGGGGGGGGGGGGGGGGGFGGGGFEFFGGGGGGGFEFFGGGGGGGEFGGGGGGGGGGFGE,FFCFGGGGGEEFFFGFGGGGG9FFGGGGFFGGGFF@FFGG#9:#:ADFGFGGGGGGGGDDFCEGGGGGF>C?GGGGGGCGFGGFGGF7#440CFFFFGFDFFA4CGGGFCFFFFF=++@FFGFGCEF;A46;68@22363@<6>C@C5)).)).5: +@M02542:108:000000000-AJUMM:1:1101:14090:1108 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAAATAGTCAATAAATTGTCCAAGTCAATGGACGGTTAGAAGCTGAATCCTTCTACAAAGTCAAGGGGAAAAATCAAGGAAAGCTAAGNTCNCGCTAAGCAACTCCTCTCTTAGAATCGGATAAGTATCTCCGCAAAGGGAGAAAGCAGAAGGAGCCGTTAAGCACCTTNCAAACCGATCCTAAGCAAGACTCGAAACGCTGATTAGTTACCACCTTATGACTCGTATTCCGACCCAACTACAA ++ +CCCCCGGGGGGGGFGGGGGGGGGGGGGGGGGGEDGGGGGCGGGFGGFGGGGGGGCFGFEFGGGGGGGGGGGFGGGGGGGGGGECFGFFGGGGDEDGGGGGGGADFF?FDCEEG,CFGDB@FGFF8F@9A=FFGFEFEE#9+#::DFFGFGGGC=9=::BCC,EGGDC,EEE8E@DCE6+6DF,DCEEFG5FGFGE?@@9DFC:>C7#4*/;9CD5C**1CC4:+*);<6=9CCG)*/)06A7:9ACF6+;6(().**1-/64:(1:464EBC,@F?C;7C*,>,;CC?85DGFCCCC+78CE7A5*0;)7>7DGGGC48)=FC7)476??+6AFAFFFB*3:?BF<)((8**)9((4>A9(3( 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+CCCCCEGGGCEGGGGDGGGGDGBFFGGGFGGGFG;FFGFEFAEDFFCDGGGCGGGFGGGGDFCGGGCCACAFGFEFGFDCE@ECFGCC@FC,CEGG@EGGCFFG7F7>,BFGGCDD=+>+:909CE>?FC<35,)0**3.6F>AB<7.(-4>CD*265(-3(,(- +@M02542:108:000000000-AJUMM:1:1101:8725:1109 1:N:0:4 +AACCACTCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTAGTATTATAGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCNCTNCTTGGTGTTGGGGCCCTACGGCTGCCGTAGGCCCTGAAAGGAAGTGGCGGGCTCGCTGCCACTCCGAGCGTAGTAATNCATTATCTCGCTAGGGAGGCGAGGCGGTGCTCCTGCCGTTAAAGACCATTTTTCACCAAAGGTTGATCGCGTATAC ++ +CCCCCGCCF-@FCCF@CECFGGGDF:FGGFEF>F>;CC8=CG>5B8CCEE*+30*;:/CCC*;C*2:<#**/9A+:7<**2*>EF775CD*8:44*7>(>)10+)(3.)*0-1(-)-),.((12*)*.(-9(-,). +@M02542:108:000000000-AJUMM:1:1101:14921:1110 1:N:0:4 +AAGACTCTGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAACTCAGTGAATCATCGAATCTTTGAACGCATCTTGCGCTCCTTGGTATTCCTTGGAGCATGTCTGTTTGAGTGTCATGAAATTCTCAACCTNCTNTGGTTTGCTAGTCAGATCTAGGAAGGCTTGGATCATGGGTGCCTGCTGGAGGCCTTGTGTCATCAGCTCACCCTAAANAAATCAGTGGCACCGCTTAGATTGGTGGCTTGACCTGATGTGATAGACTTATCATCAGGGATCTTCTTCATTGACG ++ +CCCCCGGGGFEGGGF9EFGGGGGGGGGGGGGEACFGCC6;EEGG4:C++=F4:FG4CF)-AAFAFFFFGAF3)));8FCF7::CC5)1749, +@M02542:108:000000000-AJUMM:1:1101:10654:1112 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATTTCAAAGTCGAGCTTTGTTGACCGCCACCCCACGGGCAGGTCTAGGGAGGACTCGATAAGTGGAGAACGTCTCTCGGAGGAGCNAGNATGGTACAACGCCCAGTCGAGTTCGACCCACAGGTCCAACCGAAGCATTTGAGGGGAGCCACCTCACGGCAGCATGCCCCCACATCCAACCGGCAGCCCGCACGAAACGGGAGAGGTTGATGACTTCACGACACTCAAACAGGCATGCACCTCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGDFGGGGGGGGGGDFGGEGGGGCDGGGGGGGGGCGGFGGGGGGGFFFGGGG?EFGGFG=+>F=#8:#6+8@EGGGFGGGEGGGGGGGGEFDGGGGDFEGGEGGGGGGGDCEGGGEFG@FF6ACCEGGFCGCF:ADCCC6CCCCF37C**9>FD>DCDGDCDG:>CCC*=;DGGGFGGGFF,>F6EFFC7?=CFFGDD?FDCEDC3=7:F<>5*;@>DG+1:C*63>><389*)9?:4**.84-:4><6).5/93*5).436?6( +@M02542:108:000000000-AJUMM:1:1101:11204:1113 1:N:0:4 +AAGACGCAGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGCGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACCCTCANATCTTTGTTGATTTGGTGGGCTTGGACTTGGAGGTTAGTGTCGGCTTGTTACCAAGTCGACTCCTCTGAAATATATTAGCGTGAATCTTACGGATTGCTCTTCGGTGTGATAATTGTGTATGACGTGTTCGTGAAGTATATCAGTGTTCTTGCT ++ +CCCCCEEEGGGGGGFGGGGDFGGGGGGGGGGDGGCGGGGGGGGGGGGGGGGGGGGGGGEEGGGGGGGGGGGGGGGGGGGGGGGGGGGGEF:FGFGGGCDFGECF@CDGGGGGGGGFGGGGGGGGGEAEGGGFF9EFGGGGFFCF7F#6:4=BFECAFC,,FACCCFFCGEF;@=CGGFGFG)275*4A+3+1AC5**;7;B@>:<32CC883A6CFF967C10).33@FFB:??((6A44-7;2@*-.))-54.- 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+6ACB@FCFFGEGDFEGDFEDFFGGFF,<@EC,6,B9@A,E@EFFGGE<+++7;DEA=BFF8,,,6@>+@E5DC;EGGGBEFGF>EDEC/;2<:CC,==?*4:CD6+2+14865*+*/;)1/2;ACFFGFE<))/*)0,5;@((,4)(.9**)*..)(4((4 +@M02542:108:000000000-AJUMM:1:1101:14441:1116 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACCTTGGTGCCGCCGGAGCGGGCTTGTTGGGGGGTTTAGAGGCAGGAGAGCCCGCCGGCTCCCAATGCGAGGCTAATGCTACTACGCAAAGGAAGGGCCTAACGGGTCCGCCACTGTATTTCGGGGCCTGCCGTGGCAGATCCCCAACGCCGGGCCACGCGGGCTCGAGGGTTGAAACGACGCCCGGACAGGCATGCCTCCCAGGATACTGGAACGCGCCATGTGCGTTCAAAGATTCGATGAT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGFGGGGGE4BEFGGGGEEGGGGFGGGGGGFFDFGGGGGGGGGCFGGGFGGGDCGGGG8CGGCFGE:0AECEECGGGFG>GGGGFFCGGE8A>EGGC660>CFCFGGGFGFGGEGG5CGCCGGG*:EGE*759ECD*CEFFFG<=<55*:CDDG)75>DF46C8<2BFG@304@*9F?((4>5)7>04A99(4(4?>0794<9:<))). +@M02542:108:000000000-AJUMM:1:1101:13652:1116 1:N:0:4 +AACGCGTTGTTGAAGAACGTAGTGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACAATAGTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGAAAAGTATTGGCAAGGGAGGTAATTCTTGTGAAAGCTGTTTATTCAATGTATTAGGTTTATCCAACTCGTTGATTGATAGTGGGAAGAAGTGATTGCTATTAGGCCCG ++ +CCCCCGGGG7FGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAFFGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGFGGGGGGGGGGGGCCFGGGGGGGGGGGGGGGGGGFFGGGGGGGGGFGCFGFGGGGGGGFGGDFGGGGGGGGDGGGGCCACDGGFGCFGGGDDGGGFGGFF7DCFCGG6A=6)0:F=?;CFC*77>=BF;:;1;E@E@CC=>*@C3?C<)6(/6 +@M02542:108:000000000-AJUMM:1:1101:13870:1116 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATTTCAAAGTCGAGCTTTGTTGACCGCCACCCCACGGGCAGGTCTAGGGAGGACTCGATAAGTGGAGAACGTCTCTCGGAGGAGCGAGGATGGTACAACGCCCAGTCGAGTTCGACCCACAGGTCCAACCGAAGCATTTGAGGGGAGCCACCCCACGGCAGCATGCCCCCACATCCAACCGGCAGCCCGCACGAAACGGGAGAGGCTGATGACTTCAAGACACTCAAACAGGCACGCTCCTCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFGEGGGGGGGGGGGGCGGGGGGGGGGGGGGFGAFGGGGEGGGGGGGGGGGGGGGGGGGCG@CFGGGDFCDFGGGFGG7FFFGFFGCFGEEGCGGGGGGGGGDGGGCC6B*=EE5CEEGGGEGGGGGDGEEGGG?F6<=EGGD3*>>)77C*>B>>>5)()8D7C25)CGGGFEFFGG7FEGGGCEGGCCFC<1:8F7B,,:;CFGCC58=CE9@FGGFG>8882>FGDD*2;8FFGF5=BFG73CD:>7528.*7*496*//50(4??@>FB>)4)6A>>**002-))))-.-) +@M02542:108:000000000-AJUMM:1:1101:21611:1117 1:N:0:4 +AAGCCTTGGATGAAGAACGTAGCGAATCGCGATATGTAGTGTGATCTGCCTCTAGTGAATCATCAAATCTTTGAACGCATCTTGCGCCCTTTGGTATTCCAAAGGGTACGCCTGTTTCAGTATCATTATAACCTTTCTCCCCAAGGCTTTTTGGCCAAGGAGGGAAAGAGCATAACCGGTGGCCCAGCGGTCTCCCTTCAGGGGGATTGTCTCGGCTGGAATGACTGTTGCAATGGTGGGCCAAATGGTCTTCCGCACTTGATAAATGTACTTTTATCAAGAGCGGGGCCGGTCTGCCGA ++ +CCCCCCFGGGFGGGGEFGFGGGGGDGGGFGECG;:FFDGGFGGGFGGFGGGGGGGGGGF9FFGGDEGDFGFGCFEGGGC:FGGBCG@D8FFCGGGGGC8,<22;CFG=5E//1CFEF?FDC+AD7C?F++**=ED547=FFFG7D+9>56D?:**-9*:7C4).6=9FCF7CFFFFC8?9++2+2**==CE6CF*01+2;*3<:+<2:47>:3:BA*=?9=2,3::4),4>***:)3<0-)3(( +@M02542:108:000000000-AJUMM:1:1101:9815:1117 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAATTGTCAAAGTGTATGCGCATCTAAAGAGACACAGCAGATTAGAAGACGGCAGGCACAGGCACCGAGGCGGTCACAACGGCGATGAAGTTAGACTATCACACCGTGAACCGTCGGGCAACTAACGTGACCGAGCTAATGCATTCAAGGAGAGCCGAACCCCACAATGCAGGATACCAGCAAGCTCCCAAATCCAAGCCACGTCCGATTCAAAACCAACTGGTATTGAGAATTAACACACACTC ++ +*>*FFC5CC4+A6CEGFGFG4)*979C4*>**/0<6))/).(.9:@+-.1:@))(/.)--6-),.00:00.(.1:024 +@M02542:108:000000000-AJUMM:1:1101:14558:1118 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGAGTTCATTCAATTGTCTCAAAAGAGAGACAGTTAGAAGCTCGCCAAACACTTCACGGTCGCGGCGCAAAAAACTATCACACCGAGAGCCGATCCGCAAGGAATCAAGCTAATGCATTTGAGAGGAGCCGACGCAAACCGACAAACCTCCAAGTCCACTCCTACAAATCCCGCAAACGCTTATAGGTTGAGAATTTCATGACACCCAAACAGGCATGCTCCCCGGAACACCAACGAGCGCAAGG ++ +CCCCCGGGEGGGGGGGGGGGFGGGGDFGGGGGGGGGGGGGCGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGFGGFGGGFGGGFGGGGGGGGGGGGGGGGEGGEGGGGGGFCFBEGGGC>B@GFFECEGG6E5BCFGGCCFDG+2AFCFGG*CFCGF>ECD=*/9/97?CF707*9FGGGG7:*94>FFF).8>:C4*43().0*-0(-,2(((475/*)*-(,((((,- +@M02542:108:000000000-AJUMM:1:1101:16739:1118 1:N:0:4 +AACCAACTGATGAAGAACGCAGCAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGTTAATATCAACCCCGACGGTTTTAAACTATTGGGTGTTGGACTTGGAGGATAGTGCTGGCTGCAAAGTCGGCTCCTCTTGAATGCATTAGCTTTGGACCTGTGCGTGTTTGCTAGCGGTGTAATACATTTTATTCACCACTGGCCGTGTCACTACTAGGGTCTGCTCTT ++ +CCCCCGGGGFFGGGGGGDGGGGGGGGFFEFC@F@@CFGGGGFGAFGGGGGG@FGGGGG7CGGGFGGFFFGGCEGGGEGGGGFGFGGG3>FGDFFEG8+>B;3,EFECE8>EF8ED9D8D::FC,=9?7CFFE*;C=FF,>C4C5FCECCC7455:<(60>C7EC9EGGGFGGFFGGCFC79BAGGFAFCCCFFC8@4=FGFF1;>C>E@96/*9>*1:(426>>A +@M02542:108:000000000-AJUMM:1:1101:12063:1120 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAGGTCAACCTGTAAAAAATTGGGGGTTGTTGGCAAGCAACCTACCGGACCCAGACGCGAGGAGTATTACTACGCGTAGAGCCGACAGGCACCGCCACTGATTTTAGAGGCCGCGGAAGCGCGAACCCCAATACCAAGCGAAGGCTTGAGTGGTTATAATGACGCTCGAACAGGCATGCCCTTCGGAATACCAAAGGGCGCAAGGTGCGTCCACAGATTCGATGATTCACTGAATTCTGCAATTCACATT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGFGGGG+>FFGG@:CCEGGCGFGGGGGGG9CCFGGGGGGEGGGEG7CGGGGECEFCE>EGGGGFCECCEEGGGG8CCFGFFGG*+0AFGGGCGG5ECCFGGGGGCFFGCFD6FFG*/:FDFD)*97>D5)//)*09:>7)))))09F?4().99BA=><)65)5DCGFGGFFBFFGFFFFF77F:AFAFFFD65::(6:97=5)-4AAFF??AFA2<4?61;BFGG3*)6;996:?: +@M02542:108:000000000-AJUMM:1:1101:17021:1122 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACCTTGTAAAAAAAAGTTTTTCCCAGTGAAGGGAGAGGACCGTGGCCCGGACGCCCTGGGTCCGATACGTGCTCAGTTAAGAAGCTCAGTGTACCGGGGGCTTCACGGGGCCGCCGTCATTGTCTTTAGGAGGGGTCGAGGGATACACCTCGACCAGGCCGTCCAACACCAAGCCGGGGGGCTTGAGGGGTGATAATGACGCTCGAACAGGCCAGCCCTTCGGAATTCCAAAGGGCGCAATGTG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGEFGGGGGGGGGGGGGGFEGGF=FGGGGGGGGGCFFFGGGEGGAEGEFGCFFFGGFF@CC:2B:5>*5*4((,7<4(0410,-)4:>6:*99(3<) +@M02542:108:000000000-AJUMM:1:1101:14808:1123 1:N:0:4 +AACCAACTGATGAAGAACGTAGCAAAATGCGATAAGTAATGTGAATTGAAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGTTAATATCAACCCCGACGGTTTTTAACTATTGGGTGTTGGACTTGGAGGATAGTGCTGGCTGCAAAGTCGGCTCCTCTTGAATGCATTAGCTTTGGACCTGTGCGCGTTTGCTAGCGGTGTAATACATTTTATTCACCACGGGCCGTTTCACTATTAGGGTCCGCTTCT ++ +CCCCCGGCC@-CFGE:FG77C?FFGFGDE4CGC=FFF+;>GDGGGG++37AF7=8?FFFFG?<66DB:0)-(5:>26:)***7*((-(81:> +@M02542:108:000000000-AJUMM:1:1101:15131:1123 1:N:0:4 +AACCGCGTGATGAAGAACGTAGCGAAATGTGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGCTCGGCCTTCTACCGGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACACTCGCACCGGGAGCGCGGCGCGTCCACGTGCGTACAACACCCAACTTTCTGCAATGTTT ++ +CCCCCCEEGGGGGGGGGGGGGGGGGCFGG6FEGFFGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDFGGFGGG+,EFGGGGGGGE+6FFGGGGGGGG+=FGGGGGGGDFCF7:+@+:**:CE5?*/*:8>C5C>EGGEGG:+<+3**28?**//:*:8*A+*5188C0A8*:/*8:0ACFG>+<5BDDD>C:6(450)(8:0:(32<4--6<4)- +@M02542:108:000000000-AJUMM:1:1101:21338:1123 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGCTCAGAGTTCAGAAAGTTGTCCGATGACGGTTAGAAGCGTGAAGACTAGATTACCCTCCGCAACAACGCAGATAATTATCACACTGAAACGGCTAGTAACGTTCGCCCATATCCATTTCAGAGGAGCCGACTACGAGAGCAGGCAAGACCCCCCAGTCCACGCCTTCATCAATCAAACTGAAGGTTGAGAATTCCATGACAGCTAAACAGTCATGCGACTCGCAATAACACATTCCGTCAGGTACATC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8FGG;E@F,,,CFGGE**3,,5>,,*>,,,>****,46,1**=*3+++3CF++;*++70<0*<2A*6+;8;+1@7;+0*:2)/.=@CF4-9**1+((-(8))-7(--)-(,))*22)1,:B)-)56) +@M02542:108:000000000-AJUMM:1:1101:14619:1124 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATGTCATAAAGTTGTCCACAAGAGACGATTATAAGCAAGAACACTGATATACTTCACGAACACGGCGTAGACAATTATCACACCGAAGAGCGATCCGTAAGATTCACGCTAATATATTTCAGAGGAGTCGACTTGGTAACAAGCCGACACTAACCTCCAAGTCCAAGCCCACCAAATCAACAAAGATTTGAGGGTTGAGAATTCCATGACACCCAAACAGGCATGCTCCTCGGAATACCAAGG ++ +CCCCCGGGECEFGGGGGGGGGGGGGGGGGGGGCFFGGGGGGGGGGGGGGGCFGGGGGGGGGGGFFFFGGGGGGGGGGGGGGGFFGGGGGG9FADFFGGD8::F9FGCF9;=BFGGGFC8,@+>C7DC9DF6,F<),11)18).4)9>37(-4)58:00 +@M02542:108:000000000-AJUMM:1:1101:19952:1125 1:N:0:4 +TCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAAACTTGTTTGTTGTTTTGTAAGGCAAAGCCAAATATACCAAAAATTCACTAATAAGAATTCTCAACGAGTTGGATAAACCTAATACATTGAAAATGTTCCTAAAAGCACTATTCAGTACGACTCATGCCGATACTTTTCAAGCAAACGCCTAGTTCGACTAAGAGTATCACTCAATACCAAACCCGAAGGTTTGAGAGAGAAATGACGCTCAAACAGGCATGCCCTTTGGAATACCAAAGGGCGCA ++ +CCCCCGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGG?FGGGGGGGGGGFEEGFFFCFGGGCGFGGGGGGGGGGGFEC?EGFF=FB8<48DDF)=EFF7A:?AFGFGFF?;44;;4=F@ECFF9A?G4=C60::19;0 +@M02542:108:000000000-AJUMM:1:1101:14240:1125 1:N:0:4 +AACCGCGTGATGAAGAACGCAGTGAAATGTGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTCTGGTATTCCGGAGAGCATGCCTGTTTGAGTGTCATGAACTCTTCAACCCACCGGTTCCTTGTTGAACTGCTGTGGTGTTTGGATTTTGAACGCTGCTATGTAATTAGCTCGCTCGTAATACATTAGCATCTCAATTTCGTAATCGGATTGACTCAGCGTAATAGACTATTCGCTGAGGACACTTTTTCAGAGTGGCCGAGACATGA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGF8FGGGGGGGGFGGGGGGGGGGGEEGGGGGGGGFGFGGFFGFGGGGGFGCFFGGGGGFGFFGGGGGGGGDGGGGFGGDFGGFGGGGGGFGGCFGGFGGFGGFGGFFFC9CGGGGGGFGC=EEGGFFF>8CFDCCCGGGDAFFC7FGGED7@FCFGDEFFDF+=B@@@F?FGCGCC88E=C3/<6+22:<*:CC3*1:?++2*:>FFFC**9*).545BEGGD?,5@,3:,6,3>8>8*@>5CEEA2,5,5+*,,+5,5::2=6:,5+=D18=:CC7@:+1>8=+1+1++22+6((/.)))1))9CC?33(/**1;.;)9).76) +@M02542:108:000000000-AJUMM:1:1101:14500:1127 1:N:0:4 +AATAAGACGATGAAGAACGCAGCAAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGAATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAACATCCTTCAACCTTTCTTGGTTTCTTGACCGGGGAAGGCTTGGACTTTGGGGGTTTTTCATTGCTGGCCTCCCTTGAAGCCAGCTCCTCCTAAATGGATTAGTGGGGTCTGCTTTGCCGATCCTTGACGTGATAAGATGTTTCTACGTCTTGGGTTTCGCACTGTTGCT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGE@EGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGFGGFFGGGGGGAFGGGGGGFFGGDGG@ECFGFED:E@CGGGGGGGGGGGGECG?F?77;2,:CEF<:CCGGGC8FGGG+3?FCFFF:49EFFFG7EG=CG647*:@*:073?:<7>D0712).).) +@M02542:108:000000000-AJUMM:1:1101:20403:1127 1:N:0:4 +AAGTTAAGGATGAAGAACGCAGCAAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGAATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAACATCCTTCAACCTTTCTTGGTTTCTTGACCGGGGAAGGCTTGGACTTTGGGGGTTTTTCATTGCTGGCCTCCCTTGAAGCCAGCTCCTCCTAAATGGATTAGTGGGGTGTGCTTTGCCTATCCTTGGCGTGTTAAGATGTTTATACGTCTTGGCTTTCCCACGGTCGCT ++ +CCCCCFDEGDFFFGGGGFGGGGGGGGGGCFGGCEGGGGF8FFDF@FFFCFFFFGCCFGGCGGFFGGGG=FGGGCFFDFCCD8FFAFFFGFEFDCGGGFG?FDE:C:FGGGCE@DFGCFGGGGG877:>,DDF,>,;EC>A7,:A96CDC6CGGG0:<087F9;++;*2@7++++24>C*/*170**2>*:*7>@66)9C)8(7**/0).549*9)*43(4().(47C7**.,(313(3( +@M02542:108:000000000-AJUMM:1:1101:20093:1127 1:N:0:4 +AACCAGTGGATGAAGAACGTAGTGAAATGTGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTCTGGTATTCCGGAGAGCATGCCTGTTTGAGTGTCATGAACTCTTCAACCCACCGGTTCCTTGTTGAACTGCTGTGGTGTTTGGATTTTGAACGCTGCTATGTAATTAGCTCGCTCGTAATACATTAGCATCTCAATTTCGTAATCGGATTGACTCAGCGTAATAGACTATTCGCTGAGGACACTTTTTCAGAGTGGCCGAGACATGA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGFGEEGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGFFGEGDFGGFFGG;DGG?FF?F6:FFFFFGFEFF;..AF@FEEE()).4?ACGFGFF974)46 +@M02542:108:000000000-AJUMM:1:1101:14266:1127 1:N:0:4 +AACCACTCGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGCCCTCCCTCTGCGGGGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACACTCGCACCGGGAGTGCGGCGCGTCCACAGCCGTTAAACACCCAACTTTCTGA ++ +CCCCCGFFGEGGGGGGGGGGEGGGGGGGGGGCFGEGFGGGGCGGGGGGGGGGGGGGGGGGDGGGGGGCGGGGGFGCGGGGGGGGGGGGGGGGGGGGGGFGGGFFFFGGDGGGGGGGGEGGGGGGGGGGGGDDG<CFGGGGDEGGGGGGFFFGGGEGFGGGGGGDGGGGC?FGEEGEDGGG6*>EGGF55C5CFGFFG=C>@?D4<3CCDDE9F>D>.9B.).:7>>>>F6(<33-43(.))7DDFF:0?),82?(((20,,@BEE@DFEFFGGGGGGG66D@,EDEEDEEE>8CDF86ECCGFFGGF72:C@7<8BEDDCCE=;C4.::66CF5>FE4:-)19BDF>A>2)).2<@**)0))4,460)- +@M02542:108:000000000-AJUMM:1:1101:11909:1129 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATGTCATATAAGTAAAGACTAGCTGTCCAACTGAAGGACGGTTAGAAGCGCAAGCTTCTGTCACTTCACGACTACGGCGCAGATAATTATCACACCGAAGCGATCCGTTACACTCACGCTAATGCACTTAAGAGGAGCTGACTATGCGAGTAGCCAGCACAACCTCCAAGTCCAAGCCTCCGATAACAAAAAAGCTATGAAGGTTGAGAATCACATGACACTCAAACATGACTCCACCCAGG ++ +CCCCCGGGGEGGGGGGGGGGGGGGGGGGGGGGEGGDCGGGGEGGGGGGGGFGFGGGGGGGGGGGGGGDGGGGGFGGGCGGGGGFGFGGGGFCGGGGGGGGGGGGGGGGGDGGGF,EEFGGGGGGGDFGG=FGFC7+@C=FECF9@FGCFCDA,F:CGGGGGDGGGGGGGFAFA@FCBEC78B56EFEDCCFGG*>CGGCG98??FGC*=F6FGCFFFC79+83CCA577C>C*2;D81*1:7774@6*0*36)*7<))5)1*/.637<:024(-6**/*,)((-(,8 +@M02542:108:000000000-AJUMM:1:1101:18553:1130 1:N:0:4 +AATAAGCCGATGAAGAACGTAGTAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAATATATCAACCTCCTCAACTTGTGTTGAGTGTTGGATGTGGGGGTTCCTTCTTTGCTGGCTTCACGGTCAGCTCCCCTGAAATGCATTAGCGGAACAACCTGTTCACTGTTCATTGGCGTGATAACTATCTACGCTGCTTGTTGACAGTGAAGCAAGTTCAGCTTCTAAC ++ +CCCCCGGGGGGGGGGFGGGGEGGGCFDGGGGDGGFFFGFGGGGGGGGG9FGGGGGFFGGFGFGGGGFGGGCFGGGDDGGGGCFGFGFG@FGGGGGGFGGGGGGGGDD+?B=FGDGGGFGGGGFC5EFCFGCDFC;:FGGCCDBCEFD>CFCGGGCE7DFG*@83:DGC9CFB>=?CDC>*56FFGGGFGGFGGF?9+:@F6)29DGDFGFFEFFGFFFF>D3*4;814)*84<<<2:24:BFGG472:AAA>)4- +@M02542:108:000000000-AJUMM:1:1101:10930:1130 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACATTTCAGAAAGTTGGGTGTTTTACGGACGTGGACGCGCCGCGCTCCCGGTGCGAGTGTGCAAACTACTGTGCAGGAGAGGCTGCGGCGAGACCGCCACTGTATTTCGGGGCCGGCCGGTAGGAGGCCGATCCCCAACGCCGACCCCCCGGAGGGGTTCGAGGGTCGAAATGACGCTCGGCCAGGCACGCCCGCCAGTATACTGGCGGGCGCGATGTGCGTTCCAGAATTCCCTCATTCCCTG ++ +FEC7+6=5,E,*CEE*18C**:EC?*8*::582:/?*:?57*/:*/5:+**/*/*/1///*05FDBG33)9))00)097*04309.*(-,-).*)5(-((-))()00***(()-))).) +@M02542:108:000000000-AJUMM:1:1101:20039:1130 1:N:0:4 +AAGGCGCGGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACCTTCAACACTTTTGTGAAGAAGGCTTGGACTTGGAGGCCGTGTTGGCTGGCAACAGTCGACTCCTCTGAACTGTATTAGTTGCGAACCTTACGGATCGCTTCGGTGTGATAATTGTCTACGCCGTGGTGTTGAAGTATAGTCGTGTTTGAGCTTCTAAC ++ +CCCCCGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGFFGGGGGFGGGGGGGGGGGGGGGGGFGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGFGGGGFGGGFGGGGGGFGGGGGGFFGGFFFCFFDFGGGGGEGG9==DE7EEGDFECFFGGGGGGCFGGFGEGEGGCCGGFC,??G,CFFGD7+9):5CCGGFGGGGDC*>GGDDAFCF6CFFBEED)/,.21==45=AAD))-8:BF*9@34A(9<9<> +@M02542:108:000000000-AJUMM:1:1101:16303:1130 1:N:0:4 +AACTTGCAGATGAAGAACGTAGTGAAATGCGATAAGTAATGCGAATTGCAGAATTCCAGTGAGTCATCGAATCTTTGAACGCACATTGCGCCCTTTGGAATTCCGAAGGGCATGCCTGTTCGAGCGTCATTATCACCCCTCAAGCCCCCCGGCTTGGTGTTGGACGGCCTGGTCGAGGTGTATCCCTCGACCCCTCCTAAAGACAATGACGGCGGCCCCGTGAAGCCCCCGGTACACTGAGCTTCTTAACTGAGCACGTATCGGACCCAGGGCGTCCGGGCCACGGTCCTCCCCCTTCACC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCG<=4>7=FCD77CCFFF>>F75>9E@GF=:28?B;76:>9>>B:9B27D71*48,(4223) +@M02542:108:000000000-AJUMM:1:1101:16666:1130 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAGGTCAACCTAATAAAATTTGGGGTTGTTGGCAAGCAACCGACCGGACCCTATAGCGAGGAGTATTACTACGCTTAGAGCCGACCGGCACCGCCACTGATTTTAGAGGCCGCTGGTGGGCGGGCCCCAATACCAAGCTAAGCCTGAGTGGTATAATGACGCTCGAACAGGCATGCCCTCCGGAATAACAGAGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTGAATTCCGCACTTCACATTACTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEFGGGFGGGGGGGGGGGGGGGGEEGGGGGGGGGGDGGGGEFCFGGGGGGGGGGGGGGGGGGGGGGGGGG>F7FFGGGGFFCFFGFGGDGF7FFCGGFG7FFFEGCCDGGGCGFC@EGFG+<*88C@F<9@EGGFC:C88C5CCF***/CD)08:FG6B(9FFDF6<2:FF45=<><)642(45))07:<9:))4). +@M02542:108:000000000-AJUMM:1:1101:16103:1131 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTACCTGATTTGAGGTCAAACTTGTTTGTTGTTTTGTAAGGCAGAGCCATGATACTAAAAATTCACTACCAAGAATTCTCAACGAGTTGGATAAACCTAATACATTGAAATATCCTGAAAGCACTATCTAGTACTACTCATGCCGATACTTTTCAAGCAAACGCCTAGTCTGACTAAGAGTATCGCTCAATACCAAACCCGAGGGCTTGAGAGAGAAATGACGCTCAAACAGGCATGCCCTCTGGAATACCAAAGGGCGCA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGFGGGGGFGFGGGGGGGGGGGGGCGGGGGFGGGGFFGGFGGGGGGGGGDGFGGGGGGGGGFDGGGGGGGGGGGGFGGGGF74CFGGGADF)/0;/4CGGGCG5*=C@FFGGGGGGGDGGF6CCC6=CFC6@BFG49C5DGGF5F@2FFFBF47BGBF?F0:>FFA>B((4:A;@@,7:,,2,2+25,,5+2,+,=,==F@9B,0)/):/8*+2=+@++);;F)2;+;8;=1)9?;FF3:)().(6<(61:?6C46:?F2)2. +@M02542:108:000000000-AJUMM:1:1101:21663:1134 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATGTCATAAAGTTGTCCACAAGAGACGATTATAAGCAAGAACACTGATATACTTCACGAACACGGCGTAGACAATTATCACACCGAAGAGCGATCCGTAAGATTCACGCTAATATATTTCAGAGGAGTCGACTTGGTAACAAGCCGACACTAACCTCCAAGTCCAAGCCCACCAAATCAACAAAGATTTGAGGGTTGAGAATTCCATGACACTCAAACAGGCATGCTCCTCGGAATACCAAGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGF@FGGGGGGGGGGGGGEGGGGGGGGGGGGGGGG>DGGGGGGGGGGGGGGGCDECEE5?GGGG9EFFCFFGFFFCFEFDEECE=CGFDCCGGGF*@@CGGD:7DG=A@FFF6@>0(( +@M02542:108:000000000-AJUMM:1:1101:15488:1134 1:N:0:4 +AAGACTCTGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTCTGGTATTCCGGAGAGCACGCCCGTTTGAGTGTCATGGTATTCTCAACCTCTAGTAACTTTTTTGTTACTAAAGGCTTGGACTTGGAGGTTGTGCTGGCTTTCTTGCTAAGTCGGCTCCTCTTAAATGCATTAGCGTACATGTTCGATCGCTATCAGTGTGATAATTAGTTGCGCTGTTAGTTCGATTGAAGTTACAAGGTGTGCGCT ++ +CCCC?FGGGCFGFGGFGGGFCFGDGGGCFGEGGCCFGGFGGGGGGGGGFGGGGGFGGGGGGGGGG,E:FFGECFGC,888C7;3,,7@68*3C48CFGFG7E:78@9=CG79>7EG7=:EEFC=)/6*8?8=C>F>1++1+71)+11+157123)3:+))/7?83))-66*072(.(.8:((4 +@M02542:108:000000000-AJUMM:1:1101:20654:1135 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCTTGTCCGACCCGAGGCCAACCTGTAGAGGTGTGACACTGGGTCCACGGTTTTACGGCAGGCCACCCAGGCGTCCCGAAGCGTAGCGGTAAGTTCTACTGCGCTAAGGAGGAGCCGCGCTGGGGGCCGCCACTGCATTTCGGAGCTGCGGGACGCTTGGTCCCGCAGGCCCCAACACCAAGCCGAAGCTTGAGCGGTGATGCGACGCTCGGTCGGACATGCCCTCCGGAATACCAGAGGGCGCAATGTGCGTTCAAAAACTCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCEGGGGGGGG7<@CGGGGGGGGGGFDGGGECEGGGGGGGGGGGGGFGGGGGGGGGGGGGGGEGGGF?E5DBGGFED5CDGCDDFFFFG?F?FFGFGFA?7?)5::(226((<92*17<92:<>:?,3- +@M02542:108:000000000-AJUMM:1:1101:17047:1135 1:N:0:4 +AACGCGTTGATGAAGAACGTAGCGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACAATAGTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGAAAAGTATTGGCAAGGGAAGTAATTCTTGTGAAAGCTGTTTATTCAATGTATTAGGTTTATCCAACTCGTTGATTGATAGTGGGAAGAAGTGATTGCTATTAGGCCTG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG=FGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGCGGGGGGCGGFGGGGGGFGGGGGGFF6EFCEGGFGGGGGGGGGFGGDGGGGCDFECEEFGFFGF+B>FGGGGGFABAFC?FDFFGFE=CC?AFFFF108@EC@CF6;7ACCEEFA;E), +@M02542:108:000000000-AJUMM:1:1101:12629:1136 1:N:0:4 +AAGGTGCTGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTAGTATTCTGGCAGGCATGCCTGTTCGAGCGTCATTTTCAACCCTCAAGCCCACCTGCGGTGCTTGGTGTTTGGGTTAGCTACGAGAGGATTCCCCCCTGTAGGCCCTTAAAAGTAGTGGCGGGCTTCCCAGGGCCCCGAGCGCCGTAAATTATTTCTCGCTTTGGGTGACCTTGTGGGTTTATCCAGCCGGAAAAAACCCCACTTC ++ +CCCCC?FGGGGGGGGGGGGGCECGGGEGFGG7CCCFF9EFFFFDFGGGFGGGGGGGGGFCFGGGGGFGAFFGGGGGFEFGGEEGGCFCCECCGCGGGGGGGGFD,CF>FGCFCFGCGGGGGGCF;D?F:8DBF;<;CEFCGG8CECB:5***2:+:D3*/>/*:35)1***9)2*9@D7;****.),*0*)0()1**<6)-:)<72=A2.),(-((.)*)1-4:(4;C6FDGGF5:95>F>F9FF7=F<70075>:51:4?:?A:)1:>?F7:;FF>?1 +@M02542:108:000000000-AJUMM:1:1101:19166:1137 1:N:0:4 +AACCGCGTGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCATATTGCGCTCGAGACTTCGGTCGAGAGCATGTCTGTCTCAGCGTCGGCTCACCCCTCGCCCCTCCCCTTTCATTTGCAAAGGAGAACGGGCGGACGTGGCCGTCTCGTTGCTGTTAGTTATTAATTAACAGGCGGCGGGTCGGCTGAAGTGCAGGGCTCGCGGCGCGACCCTCCCAAAAGAGCGCCAGCATGGTAGGTGGCTTCACGCTGCATGCCGCT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGFFFGGGGGGGGGGGDGGGEGDGADGDGGGGGDGGGGGGGGGGGGGGGGGGGFGGFGGGGGGGGGGEEECGFGGGGGFFGCGGGGGGGGG?FGGGGGGGGGGGGGGCGGGGGGGGGDFGGGGFGGGGGGGGGEDGDE3D<)9C7)7:4>CF>:F5)5:32(-?FFF=(<><<<(.<675;70,6<:730( +@M02542:108:000000000-AJUMM:1:1101:14987:1137 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGCCAAAGCTTTAAAGTGTATTGTCCGTAAGGACGACTATAAGCAGCACCACTGAAGAGTTCCTAAGGCTGTGGCGCAGATAATTATCACACCGGTGCCCGGCACTCTAAAAGCGCAAGCTAATATATTTCAAGACGAGCCGACTACGGCACAGTCCACGTCCACCTCGACAGACCGCATTAACAATCTGAGGGGCGATCGTTACGTGACACTCAAACAGGCATGCTCCGCGGAATACCACGGAGCGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGFGGGGGGGGGGGGGGGFGGCFGGGGGGGGGGGGGGFDFGGGGGG>FGEGFGEFFFBF49F489)79<><7::>:7?2<)4020(476*B(( +@M02542:108:000000000-AJUMM:1:1101:16192:1137 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCTCACCCGATTTGAGGTCAAGGTTTATAAAACTCTGTCTTAGATGCAAGACTGTTTGAAGCGGGGTCTGAAGCGACAGTGCGAAACCCAAGCCGTAGAAACATCTTATCACGTCAGGGATCGGCAAAGCAGACCCCACTAATCCATTTAGGAGGAGCTGGCTTCAAGGGAGGCCAGCAATGAAAAACCCCCAAAGTCCAAGACTTCCCCGGTCAAGAACCAAAGAAAGGTTGAAGGATGTTAACAAAACTCACACTGGGCT ++ +CCC@:>+@FDE9?F<++@F:?:=FDC+B+BFFECE,<>,5A,,EF,?@>FECC8=FE+<7<>3@FGF,,,@FFFEFF7;9F9@FFB;;E6C7**4FGGDGGGFGG=8D*;CGFG7F4=EGGGFCDF67CD3CDC?FBF4*)02?BF*B(41 +@M02542:108:000000000-AJUMM:1:1101:22452:1138 1:N:0:4 +AAGACTCTGATGAAGAACGTAGCAAAATGCGATAAGTAATGTGAATTGCGGAATTCAGCGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTAGTTTTCTAGCGGGCATGCATGTTCGAGCGTCATTTCACCACTCTGGCACTTCAGTGTCGGGCGTTGGGGCTCTTCTTTAGGCGGTAGGATTTCCTACCGTATCCTGTAGGCCCTTACGATCAATGGCGGGCCCAGTTGGAGACCCGAGCGCAGTAACCTAATTAGACCAGGGGCTCTCGGACGTGCTTTCTAGCCCACTTATACC ++ +8B@CBAFGGA@<6EE9EF76;CDCFCFFAFG7D6BEFA,CCC,66CF9FEG@F@F9EA@::<+@C*@,7,7,7,,47EEE@<7D,C<;@,6<<8*=,<@,,>,?++?/5B:+/*/=*+4+=<=3:ED5**2:+<2*65F*:)593<7//0::**0))11**/,0)/)7((((1).(03((32))))/2:0*48:)4)-44 +@M02542:108:000000000-AJUMM:1:1101:15146:1139 1:N:0:4 +AAGACACCGATGAAGAACGTAGCAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGCCTTCTACCGGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTTCTGAAATGTTG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGFGGGGGGGGDFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGFCFGGGGGGGGGGGGGGGGFGFGGGGGGGGGGGGGDGGGGGGGGFGGGGGGGGGGGFGGGGGGGG@FGGCGFCEGGGEGEGGGGGGGGGGGGGGGGGGGGDCEDCEGEGEGGGGGGFFFFGGGDGEGGGGGGGGGGGGGGGGGCFGGGGGDGGGGGFGGGEFF:/).9CDGD3CD53>EGFFBFFG>GFFFFFF>:@42:F<1?2:F>FFGF2:)699:) +@M02542:108:000000000-AJUMM:1:1101:15427:1140 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATTTCAAAGTCGAGCTTTGTTGACCGCCACCCCACGGGCAGGTCTAGGGAGGACTCGATAAGTGGAGAACGTCTCTCGGAGGAGCGAGGATGGTACAACGCCCAGTCGAGTTCGACCCACAGGTCCAACCGAAGCATTTGAGGGGAGCCACCTCACGGCAGCATGCCCCCACATCCAACCGGCAGCCCGCACGAAACGGGAGAGGTTGATGACTTCAAGACACTCAAACAGGCATGCTTCTCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGFGGGGCGFGBFFFGGGGEDDEGFGGGGGGCEGGGGGGGGFEGGGGGGGGFFGGGG78CEGGFFGGG7FG@CEEGGGGGD=CCEGEEGC=ECEGFCEEGGGFGGGCECDGG@D3DDDC*9@:?5>/>>.)>CFF<2<4=@*<=B>:>?0.),)2*8F>:2)).66( +@M02542:108:000000000-AJUMM:1:1101:18632:1141 1:N:0:4 +AATAAGCCGATGAAGAACGCAGTGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCACTCCTTGGTATTCCGAGGAGTATGCCTGTTTCAGTATCATGAGCACTCTCACACCTAACCTTTGGGTTTATGGCGTGGAATTGGAATGCGCCGACTGTCATGGTTGGCCCTTCTAAAATGTAGTTCTTGGCTGTCACCTAATACAGCAGTTTGGCCTAATAGTTTTGGCATTCATTGTCAAATCTTTGGCTAACATTTGCTCCATGAGTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGF@F@FGDDGGGFGGGGGGEGGGEGGGGFGGDFGGGDGFFGCD9FGG9FFGGGGGGGG?C6DEFGGGFGG?FGGGFGGCFFGGDFC=FACGFCGGGF38FFGFAEFFGFF?5)78@FEFEEF@@EEEFFGGFC8)9).6) +@M02542:108:000000000-AJUMM:1:1101:16512:1141 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACCTGGAGAAGTTGGGGGGGTGTTTTACGGCAAGGAGCGCTGCATCGCGGAGAGGATAGAGAACTACTGCACTCGGTGATGACAGCGAGCCCGCCACTGATTTTCGGGGACTGCGGCAGCCGCAGAGGCCCCAACGCAAGCGGGAGCGCTTGATGGTGGACATGACGCTCGGACAGGCCTGCCCGCCAGAGTGCTGGCGGGCGCAATGTGCGTTCAAAGATTCGCTGATTCACTGACTTCTGC ++ +CCCCCGGGGCFGFF@FGGDGFGFF@FFGAEGFFE@FEGFF9FFGFECDFGEF@BFFFFFGFGFEEGGGGCFFEGCGGGEGEGG@FEGEFCFFGFGECGFEGFGGDEG5?5CC68,ACC?CGGGFEGGGFGFFC?8;:CGGC9@EGCEEFGGGGGDFGGG:CC>CEGGGGGGGE*1:CFEG8ECGGDF?ECEEEEG5CF>5CCCGGGEE@@FGGFGGG6CFCFCEGCGGC5C5CF8*07DBF>BD3)7:F?*9*4048F=/8?AA:(-:1260:C402().6-4) +@M02542:108:000000000-AJUMM:1:1101:11161:1141 1:N:0:4 +AACGCGTTGATGAAGAACGTAGCGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACAATAGTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGAAAAGTATTGGCAAGGGAAGTAATTCTTGTGAAAGCTGTTTATTCAATGTATTAGGTTTATCCAACTCGTTGATTGATAGTGGGAAGAAGTGATTGTGATTAGGCCCG ++ +CCCC@CFEGF9F=BFF==A9=DEDBFAFCFE=CFGCBFGA;;;CFGFGG68DBGGGGFGGFFGFG,;ACGGGCF>C6@FF>DF585D>9*1.7C7A?A4285=74)9+:++1197@E((69 +@M02542:108:000000000-AJUMM:1:1101:11765:1141 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACTTTATAATAATAAGAGGTTCAAGTTGGCTAGAAAACCCGCCAGATCTCCCCTGAGCGAGTTTGGTTACTGCGCTCTGGTTTCAGACTGGGCCCGCCATTAATCTTAAGGGCCTACAGGATACATTAGGAAATCCTACCACCTATAGAAGCGCCCCAACGCGCGACGCTGAAGCTCGCGAGTGGGCGAATGCAGCACAAACACGCCTACCCCCAAAAACCTTAGACTGCTCAATATTGATCC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDFGC6FGG9FGG,6EFGGGGGG96F,6,9,C,,CC,,,,,6,,:,6C,,6C,E6FFG8F,6+++67FA,,,,,BC,,:,7+8++C,+4B5,=F9,,,5@>,@3,,75,,@,31>*>*CC**=*/*)2)*1*)3A*+3*1*)/*/:/))1<7***:F*9)83))*))(0)*0/,7(()8.,)(.))-)-).*02?0)))).))- +@M02542:108:000000000-AJUMM:1:1101:22416:1142 1:N:0:4 +AAGGCGCGGATGAAGAACGTAGTAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACATTCAACACTTTTGTGAAGAAGGCTTGGACTTGGAGGCCGTGTTGGCTGGCAACAGTCGCCTCCCCTGAAACGTATTAGTTGCGACCCTTACGGATCGCTTCGGTGTGATAATTGTCTACGCCCTGGTGTTTAAGTATAGCAGCTCTCGAGCTTCTAAC ++ +@CCCCGGGDCFEFGFEGGGGFEGGGGDEFGGGG>CGGGGGGEGGCFFEFFGGGGGGGGFGGGGGGF,CFGFGG9FAFAGFEEG:EGGCFCGGFGGGGGD9CC,:BFGDFG?FFGDC,DDG7<=FFB@F,=>CGGGGGGGC@8>ECFGGFG9C***>8C>CC,,,,4,1=,>@F98,)**)2=?FFGC5/8**2*:3*9)89++2;FFFFF7,:;C87DB@FC6;,,4FFFF>FC>??7EE7C4?:3>4=3?D37*)()(-,4--:)-*:*7<9((-((-.( +@M02542:108:000000000-AJUMM:1:1101:10965:1143 1:N:0:4 +AACCAACTGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGTTAATATCAACCCCGACGGTTTTAAACTATTGGGTGTTGGACTTGGAGGATCGTGCTGGCTGCAAAGTTGGCTCCTCTTGAATGCATTAGCTTTGGACCTGTGCGCGTTTGCTAGCGGTGTAATACATTTTATTCACCACGGGCCGTGTGCCTATTAGGGTTCGCTTCT ++ +CCCCCGGGGGGFGGGEFDEGGGGGD:EFFFGFGDCEFFEGGFFGGGGGGGGDGGGGGGGGGFEGGGGGGDFGGGGFFGEGGGGGGGGGECF:FGGGGGGGGDFGGGGG+CFEGGGGCGEFFFFF7D@78,5@:8*D,>8EGG7,:@,@D?6>CFFC?2DCC;C7;=7CEG?@EC*08,CFFCDCGGEECDACC4>3CGDG7D6+79BFFFF48FBGD?(9)<)3),3())).6<=F=F5((-4,8?4 +@M02542:108:000000000-AJUMM:1:1101:14823:1143 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAAATAGTCAATAAATTGTCCAAGTCAATGGACGGTTAGAAGCTGAATCCTTCTACAAAGTCAAGGGGAAAAATCAAGGAAAGCTAAGCTCGCGCTAAGCAACTCCTCTCTTAGAATCGGATAAGTATCTCCGCAAAGGGAGAAAGCAGAAGGAGCCGTTAAGCACCTTCCAAACCGATCCTAAGCCAGACTCGAAAGCCTGATTAGTTACCACTGTATGACTCGTAATACGACCCAACTACCA ++ +CCCCCFGGGGCFGGGGGGGGGGGGGFFFGGGGGGGGGGGGGGGGGGFGGGGGGGFGGGGGGGGGGGGGGGGGGGGCGGFGGGGGFGFGGGFGGFGGGGGGGCF9FGGDGGGGFDFFGA>E7,,=<7CCCF?CC*=5=*479:C+CCF4*:AA5D4>5C;AF@F6@FA):A0*<()6<*=*)1)382((..()1179??0>?FB +@M02542:108:000000000-AJUMM:1:1101:17214:1144 1:N:0:4 +TTTTTACCGCTTCGGCGTTATAACCTCACACTCAATCTTTTATCACGAAGTCATGATTGAATCGCGAGTGGTCGGCAGATTGCGATAAACGGTCACATTAAATTTAACCTGACTATTCCACTGCAACAACTGAACGGACTGGAAACACTGGTCATAATCATGGTGGCGAATAAGTACGCGTTCTTGCAAATCACCAGAAGGCGGTTCCTGAATGAATGGGAAGCCTTCAAGAAGGTGATAAGCAGGAGAAACATAAGAAGGCGCATAACGATACCAATCAACCTCAGCAACCTTAA ++ +CCCCCGGGGGGGGGGGGGGGGGGGFFF,EFGGGGGGGGGGGGDGGGEGCCGGGGGGGGGGGGGFGGGGGFGGFGGGGDGGGFGGGGGGGGGGGGGGGGGFFGGGGGGGFFGGFGGGGGGFGGGGGFFGGGGGGGEGECFGFFF@EGCFFGGGGD9FGGGGFGGGEEFCCGGGGGGGFDDGGGGGGFGGGGGGGGGGGCFC55BGGGDGD?,?FF+AFGG6*CDG70>B:FF0:?:@?0)/()).8?B2()20)2,596 +@M02542:108:000000000-AJUMM:1:1101:10550:1145 1:N:0:4 +AACTCGCTGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTTAATGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTCGGTATTCCGAAGGGCATGTCTGTCTGAGCGTCTTTTAACTCTCAAACCCTACCCTTTGGGGGGTAGGTCTTGCCCTCGCGGCTTGACTAGGTTTGGTTCGTGAGCACTTGTCGGCTTTGTTTCGGCTTGCTTTAAAATTTTTTAGGCTTTCTACAAGTTGTGACCTTTACTTGCCCACCTTGAACCTGGCTTGATAGTAACATATC ++ +CCCCCGGGGGGGGDFFGGGGGGGGGGGGGGGGGGEFGGGGGGGGGGGGGGFGFGGGGGGGGGGGGFGFGGGGGGGGEGGGGGGCFGGGGGCEFGGGGGAFG9EFGGGGGGGGDCFFGGGGGFCGGGGGGEGGGGGGGGGFGGFF8?F:CGGFDEGGGFGGGGFEFFEGGGGGG8@EF8+FFC,5>CEFGD>GCBFGGFFFGG?64@)9>3(9B+,,8+3@ABAF,3D,8;@6B,D,,3,6E75@D,,@EFGG7E,<@E92==C7*,<***=**20=:,6?8*8:C+2;>::*),))2))().2;:43794AA(.(6776260,.9:*2)((,(3) +@M02542:108:000000000-AJUMM:1:1101:20967:1146 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGCTCAGAGTTCAGAAATTTGTCCGAAGACGGTTAGAAGCGCGGACACTAGAATACCCTCCACAGCAACGCAGATAATTATCACGCTGAAGCGGCTGGTAACGTTCGCACTAATGCATTTCAGAGGAGCCGACTACGAGAGCCGGCACGACCTCCAAGTCCAAGCCTTCGTCAATGAAGCCGAAGGTTGAGAATTCCATGAGACTCAAACAGGCATGCTCCTCGGAATACCAAGGAGCGCAAGGTGCGTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGDGGGGGFGGGGGGGGGGGGGGGGGDGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGEEGGGGEGGGGGGEDFGGGGGGGGGDFGFGGGGGGDGGFD7CCEE:C597ECCFFGFFFGG=FGCF?44?77@F?FFGFG<6>0>D>>B:444>044?57>B3>>:7(,18, +@M02542:108:000000000-AJUMM:1:1101:9838:1147 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGCCAAAGCTTTAAAGTGTATTGTCCGTAAGGACGACTATAAGCAGCACCACTGAAGAGTTCCTAAGGCTGTGGCGCAGATAATTATCACACCGGTGCCCGGAACTCTAAAAGCGCAAGCTAATGTATTTCAAGACGAGCCGACTACGGCACAGGCCAAATCCACCTCAACAGACCGCGTTAACAATCTGAGGGGCGATGGTTACGTGACACTCAAACAGGCATGCTCCGCGGAATACCACGGAGAGC ++ +CCCCCFFEGGEGGGG9FEFGAFDFGAFGGGGCFC@FCEFC@GAFGDFD9FCFFDEF9E,,:E?EEC+D9<99AF;BF;@;=97,@=>FE7E7C8CEGCF>E5*=8E,14:;:B:8C8F,*+=0+0;C5<5/9/:8:<7++++:7157><79DD*7896>555*))7<4<46015>)8:4-34(7;>()2:?FFB>(-4:F +@M02542:108:000000000-AJUMM:1:1101:15974:1147 1:N:0:4 +AAGACACCGATGAAGAACGCAGTAAATTGCGATAAGTAATGTGACTTGCAGAATACAGTGAATCATCGAATCTTTGAACGCACCTTGCACTCTCTAGTATTCTGGAGAGTATGCCCGGTTGAGTGTTTTGAACATCTCAAGCCCCCTGGTTTCTGTAATGGATCCCTCTGAGCCTTGGAATTGAGCGTCTGTCGGCCCGCCAAAGGTCGACTCGCTCGAAATGCATTAGCTGGATCATCTGTCCGACTGGTTGACGTTATAAGTAAATTTAACAGTCGCCTTTCGGTCTTACATACGGTGT ++ +CCCCCGGGGGCFFGGGGGEGGCEFEGCEFGGCFC;FGFGEFF+@88>EF:::CEG55B*81;*:,=F898:@>+4=F6C7;6DG7FFGFG3:BGD>CD<8.2(2;7=F?8/:*A4<4)*09.),(-4<>B04)17=F9>2>B12(- +@M02542:108:000000000-AJUMM:1:1101:8996:1148 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAAATTGTCAAAGATTGTCCTTAACGGACGGTTAGAAGCAAGTCTAAGCCCAATCCACGGCGTAGATAATTATCACACCAATAGACGGAGCCCAGTTTGAACTCGCTAATTAATTTAAGGAGAGCAGTACGCTGCAAAAGCTTCCTGCACAAACTCCCACATCCAAGTTTTACACAGATTCGTAACAAATCTGGTGAAGTTGAGAATTTAATGACACTCAAAACGGCATGCTCCTCGGAATACCA ++ +CCCCCGGGEEGFGGGGGGGGGGGGGEGGGGGGGGGGGGFGGGGGGGGFGGDF?FEGGGFGGDGFDFAFGGECFAFGGAEGEFGEGGFCFGGGGGGGGGGGGGGGGGGEDGGGFEGEGGGGDFFFGGGGDFGGGGGGGGFAEEGG7FFGGGGF9FFFGGGGGGGGG93CAFD<;=:38:8+8FCGGCEGGGCE=FF>FCFF;9FGFG6:>D9>DFGGGGFFGF+<+B@:+96CE,1+4CG6CC78CCACGF4:672@A?)=+*19AA@F+7)68;;))*(-(-1((3.***091((-.4). +@M02542:108:000000000-AJUMM:1:1101:22018:1149 1:N:0:4 +AACCGCGTGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCATTCCATGGAGCATGCCTGTTTGAGTGTCACGTTAACCCTCATCATTATGATGTCAAAGTCATAATGGTGGATTTGGATTGTGCCGTAGTTGGCTCATCCTGAAATACATTAGCTTGCACTTTTTAGGGTGCTTGGCATGGTGTGATAATTATCTGCGCCATCGCCTTATGCCTCTTCTATGTGTGCTGCTTACAGTCGTCC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGFGGGGGGGGGGDGDFGGGGCFGFGGGGFFFFEGGGFFFGCFFGGGDGFFFGDFCEFGGDGFCFC?:FGFFGFFGGGGFDG5BDDFDBE;D>FFC);?@FFFECFCC?C@EECFG+@CE?FGGGGDDCFF;DEBFF@,,=B,=9BCCFC,/@>5::9ACFGFEFFGED3.8CCFGG3DA5:7+;AAC71++=4=FF;A*6@><52))6).)1*9:))64))9<, +@M02542:108:000000000-AJUMM:1:1101:10594:1149 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTGCCTGATCTGAGGTCTAAGACACAGATTGGTGACAAATGTCATCAAGAGTTAGAAGCAGCAATTGCATCAGCTGAGGCCCTTCAATGAAGAAGATCCCTGATGATAAGTCTATCACATCAGGTCAAGCCACCAAGCTAAGCGGTGCCACTGATTTATTTAGGGTGAGCTGATGACACAAGGCCTCCAGCAGGCACCCATGATCCAAGCCTTCCTAGATCTGACTAGCAAACCATAGGAGGTTGAGAATTTCATGACACTC ++ +CCCCCGGGDEGGGGGGGGGGGGGGGGGGGGGGGGGEFFGGGGGGGGGGGGFGEGFFCF>FGGGFFG*?4,4:?4?*;9?FC*):4>04;:AAAF)2.54))()0:?A8EF@(().)=FEGGGGGGGGGGGGCC*1AED58?EGGGGGG6CCECFCFCGGGGFGGGGD3:CC7:E:>FDGFE6:36@*)-81,4)6.3:A>**/:6541 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGDGGGGGGFGGGGGGGGGGGGGFFGGGDGGGGGGGGGGFGFDGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGFAFGGGFGGCGGGGGGGGGGGGGG@FDGGCBGGGGGGFGGFFFGGABFGGGGGGF8@A)8?ABFFG=FFE??FA;;FF<;5=CEC<+C*;:?5CF@;6?6 +@M02542:108:000000000-AJUMM:1:1101:20608:1151 1:N:0:4 +AACCGAGGGATGAAGAACGCAGCGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACAATAGTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGAAAAGTATTGGCAAGGGAAGTAATTCTTGTGAAAGCTGTTTATTCAATGTATTAGGTTTATCCAACTCGTTGATTGATAGTGGGAAGAAGTGATTGCTATTAGGCCCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGFGGGGGGGGGGGGGGCECFGFGGGGGGGGGGGGDGGGGGGGGDGGGGGGGGGGGGGFGGGGGGGFGGGFFGGCCEGGAFFFGGGGGGF9CGGGGGGGGGGGGGGGFCCFFGGGFGGGAF@FFG4FFF3FCC8?CCFFA?F@6;;1?EECF@7FC??CC3=(,, 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGFGGGGGGGGGGGFGGFGGGGCGGGGGEGGGGGGGGFGGGGGGGGEEFFGGFFFD@FEEGGGGGGFFGFGGGGG6CFDFGGFFFGAFGF;;D7?;FFFGGEDFF49A9:=CEFFGGEGG46>GB.1>:6?1<(3164466:*:24:67< +@M02542:108:000000000-AJUMM:1:1101:10379:1152 1:N:0:4 +AAGGTCTAGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCGTGGCTTTCCACGGGGCACGCCCGTTCGAGTGTCACGTTAACCCTCGCCAACGACGTAGAGATACGCCGGGAAGCGGATTTGGACGTTGCCGGTCGTGAGAAGGGCTCGTCTCGAAATGCATTAGCGACGTGCGAACCACGTGCGACGTTGATAATTGTCTAAGCCTCGCGGACTTTGTTCTCATCTTCCAATCGTCGCGAGACAAGT ++ +CCCCBCEFGG9FGGDEECBFF@FGGGGGFEFC+FCFCEGD:<*55C>>F,>*6*,:3G5C557CEGC3>F7***2:00****(9@G>C-)-(9**-*.)6))4-),7*10931((2(2(. +@M02542:108:000000000-AJUMM:1:1101:12031:1153 1:N:0:4 +AACTCGCTGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTTAATGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTCGGTATTCCGAAGGGCATGTCTGTCTGAGCGTCTTTTAACTCTCAAACCCTACCCTTTGGGGGGTAGGTCTCGCCCTCGTGGCTTGACTAGGTTTGGTTCGTGAGCACTTGTCGGCTTTGTTTCGGCTTGCTTTACAATTTTTTAGGCTTTCTACAAGTGGTGCCCTTTACTAGCCCACCTTGAACCTGGCTTGACAGTAACATATC ++ +CCCCCEGCGEGGCFGFGFEFFGFGGGGGGGGGGCEFGGGGGGGGGGF@GGGGGGGGGGGGFGFGCFG8CEEGGGGCCF@8FCGGGFGGG=CCC:9EEE5>A++:6CE5C5C7*+07?+3:?C7CFG5?67C:GGFB::FCD7D?5)0)75?4FFG4:703(>@44*4:6181:7?>****)--:4B++@+@F,C,,,8,8,8,,3C,,8,,,8+8,,+,,>,@3,,,,54,,7,,,,,4**6*49,*1,=,;,;*,:*,,+,=,=<:,,0+*)/):)2**2++2;+1;A7*))*+*)+.)(()))(*).).62)5(0*29*,(((.(((( +@M02542:108:000000000-AJUMM:1:1101:13632:1154 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCCACCCGATTCGAGGTCAAACTTTGAGTAAATTGTCTCGCGATGATTAGAAGCGAGGAACAAAGTCCGCGAGGCGTAGACAATTATCAACGTCGCGCGTGCTTCGCACTTCGCTAATGCATTTCGAGACGAGCCGATCTCACGACCGGCAACGTCCAAATCCGCTTCCCGGCGTATCGCTACGTCGTTGGCGAGGGTTAACGTGACACTCGAACGGGCGTGCCCCGTGGAAAGCCACGGGGCACAAGGTGCGTTCAAAGATT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGFGEC=EGGGCEFGGGFGGFFCFGGGGGBEFB>3578>>GFGFABFFFF>5>099::1::*7C75(-34)6226 +@M02542:108:000000000-AJUMM:1:1101:9310:1155 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAGGTCAACCTAAAGGGGAAGACCAATCGTTCGACGGACCCCCGGAGCATGGCCAACGGAGCGGTGGAAGATGACAACCCATGTATAACCGCCCCAAGGGACCACCCTCCGGGAACCGCCACTGCCTTTCGGGCCCGTCCCCCCCCGGCCCAAGGCCACGGGTGGACGTCGACCCAACCAGCCAAGCAGCGCTTGAGGGGCTGGCCATGACGCCCGGACCGGCATGCCCCCCGGGAAGCCGGGGGGCGCAC ++ +CCCCCGGG@C7EFGGGACE9FGF-CFGGGCGG@@FGGGGGGG8<@FEFGAFCGGGGFE,CFFGG:7>7=DF?,?FEGGGFEB7:FGGGGGEFAAD<,EF+=:D,C@<,3CF+>>+3CFC@FGC:F*>:DCCF*14FF+=FAD8CFE7C@F=<,EBDEG,@EDFGGFGFCC58BEFFFGG68=788CGG;,BEGG,**0:7C@B4=8*6*5*<65C2.))7)57B:>2)6).((.)1)24:810(4(( +@M02542:108:000000000-AJUMM:1:1101:16154:1155 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATCCGAGGTCAACCGTTGGTACGATGGGGGGGTTTAGCGGCCGGCCGCGCGCCCGGGACCCGATGCGAGAAGAGATTCTACTACGCAGGGAGCCGCCAGGCGGGACCGCCGATGCATTTGGGGCGCCCGCCAGCCCCCGGGGGGGTTCGCGGGGTGCCCAACACCAAGCGCGGGGGCTTGAGGGACGAAATGAGGCTCGGACAGGCATGCCCGCCGGAATACCAGCGGGCGCAATGTGCGTTCAAAGACTCGATG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGEGGGGGGGGGGGGGGGGGGGGDDGGGGGCEGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGEGEDGGGGGGGGGGGGGGGGCCCGGGGGGGDGGGGGCEEGGGEEGG>EEGG:EGGGG>EGGGGGGGGCEDECCE:+CGGEEGDECEGGGGGGGGFG*9DC//>=ED5:9+2A<@GGB>DCG<*9CFF:DEC:D(B>B6>;12>A22:?EG6=D-34)24:06 +@M02542:108:000000000-AJUMM:1:1101:22690:1156 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAAATTTGATGATGATTTTGTCCGAAGACCATTATAAGCGGACTCTGAGGGATCAAACGACAGCGCAACATGATTATCACACTGACATCCGGAAGCCAAAGGTTGAATTCCGCTGATGCATTTGAGAGGAGCCGACCAATATGCGGCCAGCACCTCCAAGTCCAATCTCCGAAAGGTCGTGAAACCCTTGGAGTTGAGAATTTAATGACACTCAAACAGGCATGCTCCTCGGAATACCAAGGAGCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGADEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGDGGCGEGGCEEDGGGG6CFFFFAFFGFFFF?DFGF<<:FF3::182:??>C>FGFFFFFF?B6 +@M02542:108:000000000-AJUMM:1:1101:8843:1156 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTACCTGATTTGAGGTCAAACTTTGGTTTGTTTGTTGTAAGGCCGGGCCTAATAGCAATCACTTCTTCCCACTATCAATCAACGAGTTGGATAAACCTAATACATTGAATAAACAGCTTTCACAAGAATTACTTCCCTTGCCAATACTTTTCAAGCAAACTCAAGCATACAACCCGAGTATCACTCAACACCAAAACTATTGTTTTGAGAGCGAAATGACGCTCAAACAGCCATACCCTGTGGAAAACCACAGGGTGCAATG ++ +>EEE,,@7C:7FEGGGGGGGGF+;4C4?4C*94)/;AE83D):;ABF)6(/3@A4)5A84)(/))(.)/1.91(320)5:) +@M02542:108:000000000-AJUMM:1:1101:13316:1157 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCTCACCCGATTTGAGGTCAAGGTTTATAAAACTCTGTCTTAGATGCAAGACTGTTTGAAGCGGGGTCTGAAGCGACAGTGCGAAACCCAAGACGTAGAAACATCTTATCACGTCAAGGATCGGCAAAGCAGACCCCACTAATCCATTTAGGAGGAGATGGCTTCAAGGGAGGCCAGCAATGAAAAACCCCCAAAGTCCAAGCCTTCCCCGGTCAAGAAACCAAGAAAGGTTGACGGATGTCCACGAACCTCAAACGAGTGTGC ++ +CC@CCCEGGGGGFFFGGGGGAEFGF@E@FEEGGDFBEGCAFGGGGEGGGGGGFGGGGGGG,,EEFGEGFCFGGFFAC,6EC9EGCFC?FFEF7:DGG*78>*:>6+1@<>67:+2/57@@C7CCG4707(8>G5)3.9**+(4),)7)(9)644((((()26)2)(,--(6)) +@M02542:108:000000000-AJUMM:1:1101:15269:1158 1:N:0:4 +AACTCGCTGATGAAGAACGTAGTGAAATGCGATAAGTAATATGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAGAGGGCATGCCTGTTTGAGCGTCATTTCTCTCTCAAGCCCTCGGGTTTGGTATTGAGTGATACTCTTAGTCAGACTAGGCGTTTGCTTGAAAAGTATCGGCATGAGTAGTACTAGATAGTGCTTTCAGGATATTTCAATGTATTAGGTTTATCCAAATCGTTGAGAATTCTTGGTAGTGAATTTTTAGTATCATGGC ++ +CCCCCGGGGGGGFGGGGGGFGGGGGGGGGGGDGGGGGGGGFGGGGGGGGCGGGGGGGGGGGGGFGFGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGG9FFGFFEC88EFGGGGGGGGE>8EDGCEGGFD;7CFGGG7EFFGC:ECFGCEDD5=,=AGGFA==:CCFEDGGEDFFGGF:FGGGGGG>44?FD*7:B@DDEB0(,9//:>6287>4<03@FGFF>A>A<E?A,CEGGFEG78F:F3)1>DG5)/+)70),))2/<7-)-9**:F9<<((4118>D**2.(49:,11( +@M02542:108:000000000-AJUMM:1:1101:12901:1158 1:N:0:4 +AACTTGCAGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATCTTGCGCTCCGTGGTATTCCGCGGAGCATGCCTGTTTGAGTGTCACGTAACCATCGCCCCTCAGATTGTTAACGCGGTCTGTCGAGGTGGATTTGGACTGTGCCGTCGTCGGCTCGTCTTGAAATACATTAGCTTGCGCTTTTAGAGTGCCGGGCACCGGTGTGATAATTATCTGCGCCACAGCCTTAGGAACTCTTCAGTGGTGCTGCTTATAGTCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGDCFFGGGGGGCGGFEGGGGGGGFGGGGFGGGGFGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGG@C@FAGGCFFDFGGGGGFFCFFGG?F:+FFCFFFGG8DFEFGGGGEGGGGFGFGCCFFF?CECGGGGGDG3EGEF<*+=:CFGGGGEG*=CBGDB6>*:DG7FBFA4BG<.2))*7783FFB1;>CF3(4:6?F08 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGBEGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGFEFGGGGFGCFGGGGGGCFG8FD:4C8CFFFFFCGGGGGGGGGGGGGGGGGGGFGCFGGGGGGGCGGGGGFGGFFGGGGGDDGCFFFECGGGGGGGGGGGCCFCGGFGGDFGF@BF1:BFFFCFCCC>F);CC9)9<9-) +@M02542:108:000000000-AJUMM:1:1101:17009:1160 1:N:0:4 +AAGACTCTGATGAAGAACGTAGCGAAATGCGATAAATAATATGAATTGCAGAATTCAGCGAATCATCGAGTTTTTGAACGCACATTGCGCCCTCTGGCATTCCGGAGGGCTTGTCCGACCGAGCGTCGCATCACCGCCCAAGACTCGCTCTTGGTTTTGGGGCGTGCGGGACCTCCCTTGGAGGCCCGGCAGCCCTCAAATTCAGCGGCGGTCACCCGTGGAGGTTTTCTCCCCTAGCGCAGTAGAGCAAGCATCAGCTGCCGCTTCGGGACCCCCGGGAGGCCTGCCGCGAAGCACGCCC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGF@FCFFGDGEGGGGFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGFGGGGGDGGFEEGCFGGGGGGGGGEGGGCFGGFG@EFGGCFGEGGGGEE58ECEGGGGC+G5C*97DECFFFG7CC*7CGC=E558D*7B711>BF>7,4>(-3:08FD)0)-,25?(-41 +@M02542:108:000000000-AJUMM:1:1101:14621:1161 1:N:0:4 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+CCCCCGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDFGGGGGGDGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG?FCFFGGGGGGGGGGGGGGGGGFGCEGGGGGGGGGGGGFGGEFGFGGCE6:CGCECFGGGGGGGGGGGGGGGGFGGGG>CFGC>EGFGGF8CFGDGG)?B=4AGFFF=;CE50=@3>AFFF3<@@F?)4;F35))39(479?< +@M02542:108:000000000-AJUMM:1:1101:22029:1161 1:N:0:4 +AATAAGACGATGAAGAACGTAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGAATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAACATCCTTCAACCTTTCTTGGTTTCTTGACCGGGGAAGGCTTGGACTTTGGGGGTTTTTCATTGCTGGCCTCCCTTGAAGCCAGCTCCTCCTAAATGGATTAGTGTGGTCTGCTTTGCCGATTCTTGACGTCATAAGATGTTTCTACTTTTTGCGTTTCGCACTCTCGCT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGDGGGGGGGGGGGGDCED77FEEGGGGGGGGGGGFGFFFGGGFFGGGGGGGFFEFGGGDFGGFGGFGGGFGFCCEEG>CCFF@FCFCGG;EGFG@C>EC*;BFF@9AF97CCFC>5CB*+?9?B*;C68CG=FGC;C77>0<>ACCF++==9CFFGG?**09))*29*)*0*.)-.*2/C49)6*/*-/).))4,)(-8773<113(-)(,- 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+CCCCCGGGGGGGGGGGGGGGGGGGGGFGGGGEGEGGGFECDFDCGGCFGGGFFGFGFFGGGGGFGGFDGCEGEFGCF0+)0?>DEA@AFGFCCFE3:AFFFF9069016?F<*8>A)11(43:4 +@M02542:108:000000000-AJUMM:1:1101:9016:1171 1:N:0:4 +ACCAACTGATGAAGAACGTAGTGAAATCCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTCGAACGCACCTTGCGCTCCTTGGATATTCCGACGAGCAAGCCTGTTTGTGTGTCATGTAAATATACACCCCGACGGTCTTAAACTCTTGGGTGTATGACATGGAGGATAGAGCTTGCTGCAAAGTCGGTTACTCATGAATGCATTAGATTTGTACCTGTACGCGTTTGCTAGCGGTGTAATCACATATATTAACAACTGGCCGAGACACTATTAGGGTTGGCTTCTA ++ +BCC9CGCEAFAEFGGCFEGG?FEFFFG,,8FC@;CFFE<@FDG9EFA,,6CE<@FA,,<6,6CC,;;,EA@,>2;,,,2=B,,2,,4,=<=CF7,+,,*9555**<+137A)*2>C++++/)++1++)++**3,),(8))(0(((().)).***)0((.,1(4. +@M02542:108:000000000-AJUMM:1:1101:12405:1171 1:N:0:4 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+CCCCCFGGGGGGGGGAEGGGFFGGGFEFGGGGGDEECEFFCDGGGCGGGGGGGCGFGBDDC@DFGGCF=@FF,@@BGCFFACG:FFGFCFEF:>CFCEC@CFE8:CEE>CECGGG8EDG=?F?FB05>:>FDFF)4)(.).4BF7),8?000.97>C162>::;:1 +@M02542:108:000000000-AJUMM:1:1101:20192:1171 1:N:0:4 +AACCAGTGGATGAAGAACGTAGTGAAATGTGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGTGCTCTCTGGTATTCCGGAGAGCATGCCTGTTTGAGTGTCATGAACTCTTCAACCCACCGGTTCCTTGTTGAACTGCTGTGGTGTTTGGATTTTGAACGCTGCTATGTAATTAGCTCGCTCGTAATACATTAGCATCTCAATTTCGTAATCGGATTGACTCAGCGTAATAGACTATTCGCTGAGGACACTTTTTCAGAGTGGCCGAGACATGA ++ +CCCCCGGGGGGGGGGGGGGFFGGGGGGGGGGGGGFGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFEGGGGGGGBDFGGGGGGGGGGEGGGGGGGGGGDFFFGGFGGGFFGGGGGG?FGGGGDGGGGG>EGGGGGGGGGGGGGGGGGGGGGEFGGGGGGFGGGGGGFGDFGGGGG59C>CEEGFGCFFGFFDGGDFFFC8CFFC+8BF?< +@M02542:108:000000000-AJUMM:1:1101:19742:1172 1:N:0:4 +AACCACTCGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGCCCTCCCTCTGCGGGGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACACTCGCCCCGGGAGCGCGGCGCGTCCACAGCCGTTAAAACCCCCACTTTCTGA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGEFGGGGGGGGGGGGGGGGGGFEFEGGGGGGGGGGGGGGGGGGGGGGCGGGGGFGGGDGGGGGGGGCEGEDGEEGEEEGGGGGGGGEGGCGGEGGGG8CEFGGGD>EEG>CE5@CE8CGEFGCGGGGGEDGGGGCEGGGEDGGCA*9FFFGDGDEDG7FGGFGGF49*9CD3C:59B:357105C;=9>B>>@?0F:B(,(2)).09<)9>0449<)- +@M02542:108:000000000-AJUMM:1:1101:12430:1172 1:N:0:4 +ACAGAGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCGTGTAATTCTCAATCCCGTTTGGTTTTGAATCAGACGTGGCTTGGATTTGGGAGCTTGCTGGTACCCTGCATTGTGGGGTTCGGCTCTCCTTGAATGCATTAGCTCGGTCACGTTAGTTGCCCGACGGTTCACGGTGTGATAGTCTAACTTCATCGCCGTTGTGACCGCCTCGGTGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGFGGGGGGGGGGCEGGGGGGGGGGGGFEGGGGGGFFCFGGGGGGGFGGGGGGGGEGFGGGGGGF7EGGEGGGCGGFBFGGF?FGGGFG8EGGGGGGCEFGGGGGGGGGGCFGGGGGGGGGGGF5DCFGGGFFFFEDDDGGDDFFFFFF@3)9**99>ABBBF?>FF:BFFFF:BECCB7;(-:?4<0( +@M02542:108:000000000-AJUMM:1:1101:10213:1172 1:N:0:4 +AAGGTATCGATGAAGAACGCAGTAAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGATAGTATTCTAGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCGCTGTTTGCTTTGTGTTGGGGCTATCTATAGATATCATCTGTATGCCTTGAAAATCAGTGGCGGGTTCGCTAGCATATGTAGCGAAGTAATTTTACTTTTTCTATTTTGGCGTGCGGAGGGTTTTTTTCGCTAGCCATTTTACATTCCGTTGTTTTAT ++ 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+TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCCGATTTGAGGCCAAGTTGTCAAGTAAGAGGTTGTCCCGACCGAGGGGACGGTTGTGAGCGCAAGACCCAGGAGGTAAGGCACCCAATGAAGACACTTATCACATTGGGCTAGCGCCGAACCAAGGTCGCACTGAAGCTTTTGAGACGAGCCACCGGTCAGGCAGCAGGCGTCCAAGTCCACCTCCCCAAGCCACAACAAAGTGGAGGGGTGTGAGATTACAATGACACTCAAACGGGCATACCCTTCGGAATACCA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGEFGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDFFGGFGGGGGGGGFGFG,FF@GGGGEEEGGGGGGGGGGGGGGGCEG5CEAEGGGGFGDCCFEGGCGGGDG*:7=FGGG@G>===CGG:93)82.077@F?0:1745> +@M02542:108:000000000-AJUMM:1:1101:11654:1176 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATTTCAAAGTCGAGCTTTGTTGACCGCCACCCCACGGGCAGGTCTAGGGAGGACTCGATAAGTGGAGAACGTCTCTCGGAGGAGTGAGGATGGTACAACGCCCAGTCGAGTTCGACCCACAGGTCCAACCGAAGCATTTGAGGGGAGCCACCTCACGGCAGCATGCCCCCACAACCAACCGGCAGCCCGCACGCACCGGGAGAGGCTTATGACTTCAAGAACCTCAAACAGCCATGCCCCTCC ++ 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+AACTTGCAGATGAAGAACGTAGCAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCCGTTTGAGTGTCATTGTATTCTCAAATCCCTTCCTTTTTGTGAAGTGGGTATTGGATTTGGAGGTCTTTGCGGGTTTCATTGTACATCTGCCCCTCTTGAATACATTAGCTGGGAACCTTTTGTTAGGCTGGCTTCAGTGTGATAATTGTCTGCGTTGTCGTCGTCTTGCACTCGTATCACGGATT ++ +CCCCCGGGGGFFGCFGGF7@FGGFFGGGGGEGGGGGGGGGGGGFGGGGGGGGGGGGFEGFGGGGGGFGGGGGGGGGGFGGGEEGGFEF9B9FE@EG9EFGGGGG?FG,DEGCEC,,6:D:B,,72@FDFGGFGF9C**41*47>DECFGGCCF>*)5?6;+1==1+*=1+4=*=@FF?3(,.=+.:ABBF<0;A34=*/;*40))(((-8 +@M02542:108:000000000-AJUMM:1:1101:13486:1177 1:N:0:4 +AACCGAGGGATGAAGAACGCAGTGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTCCCATGGAATTCTCAACCTTCGGCTTCATTGACGAAGGCTTGGACTTGGAGGTCGTGCTGGCTCTCGTAGTCGGCTCCTCTGAAATGCATTAGTGCGAACGTTACCAGCCGCTTCAGCGTGCTAATTATCTGCGTTGTTGTGGAGGGTCGTCTCGTGTCCGCGCTTCTAACCGTTTT ++ +CCCCC@FBFBAC@<,,CCFDGGFFFFFGGGED<@@CFDFGGD>EAFFFF?FF3+=,,BF:EGCCFFDGEEC3B7F7F7ECF,EGFEF@)))41(-.( 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+AAGGTCTAGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCGTGGCTTTCCACGGGGCACGCCCGTTCGAGTGTCACGTTAACCCTCGCCAACGACGTAGCGATACGCCGGGAAGCGGATTTGGACGTTGCCGGTCGTGAGATCGGCTCGTCTCGAAATGCATTAGCGAAGTGCGAAGCACGTGCGACGTTGACAATTGTCTACGCCTCGCGGACTTTGTTCCTCGCTTCCAATCGTCGTGTGACCATT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGEFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGFGGEEFFGF@EGEGGFFGGGGGGDGCGGDGGGDGGGFFDCGGGGFGGFFGGDC7::*;>FFGDEBF3<5E)BFF).65:)/>>/,.())),)6 +@M02542:108:000000000-AJUMM:1:1101:18680:1179 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACCTTGTAAAAAAAAGTTTTTCCCAGTGAAGGGAGAGGACCGTGGCCCGGACGCCCTGGGTCCGATACGTGCTCAGTTAAGAAGCTCAGTGTACCGGGGGCTTCACGGGGCCGCCGTCATTGTCTTTAGGAGGGGTCGAGGGATACACCTCGACCAGGCCGTCCAACACCAAGCCGGGGGGCTTGGGGGGTGATAATGACGCTCGAACAGGCATGCCCTTCGGAATTCCAAAGGGCGCAATGTG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGGGGGGGGGGGGCFGGGGGGGGGGGGGG>*;EEGEGGGGFGGGCFGGGGDGGFEGEGEGGGG5CGGFGGGGCDGGGG5>GFDGDEGGG>>DGFFBB35>D?>;GF5()(,0)9(5:F::6?ABBF7C>7:0121().- +@M02542:108:000000000-AJUMM:1:1101:13764:1179 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAATTGTCAAAGTGTATGCGCATCTAAAGAGACACAGCAGATTAGAAGCCGGCAGGCACAGGCACCGAGGCGGTCACAACGGCGATGAAGTTAGACTATCACACCGTGAACCGTCGGGCAACCAACGTGACCGAGCTAATGCATTCAAGGAGAGCCGAACCCCACAATGCAGGGTACCAGCAAGCTCCCAAATCCAAGACACGTCTGATTCAAAACAAAACGGGATTGAGAATTACACGACACAC ++ +CCCCCGGGGGGGGGGDFFFFFGGGGGF,FFACC7CFGFAFFGFGGGGGGGGGGDFGG@CFGG9,CEEFFGGGGFGE7FGGCGCFGGGGFDGGGGFGGGGGGGGGFF+@F+@CGGGDBD,5FCF**>BCFC:,=CE7F@EF9CGCCECEE7>F?99FF2:<*=CF*B>EGCCEE:*:C09CCF3:?C?ECFG*:ECF47*>F?CCG66*9?>:>)>>*4**2=C<<(,7))(84:01<<<(69CF6F>14,7;(( +@M02542:108:000000000-AJUMM:1:1101:11589:1179 1:N:0:4 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGEGFAFCGGGGGGGEG?FFFGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGFGGFFGFC6C?+8CEG>EGGG*5DD3@)0793/:*+((-,9B?)))942:244)77***-)).6:).- +@M02542:108:000000000-AJUMM:1:1101:13976:1181 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGCTCAGAGTTCAGAAATTTGTCCGAAGACGGTTAGAAGCGTGAACACTAGAATACCCTCCGCAGCAACGCAGATAATTATCACGCTGAAGCGGCTGGTAACGTTCGCACTAATCCATTTCAGAGGAGCCGACTACGAGCGCCGGCACGACCTCCACGTCCAAGCCTTCATCAATAAAGCTGAAGGTTGAGAATTCCATGAGACTCAAACAAGCACTATCCTCGGAATACCAAGGACCGCAAGGTGCGAT ++ +CCCCCGGGF@EGGFGGGGFGFGFGGGGGGGGGGGGGGGGGGFGGGGGGGGFG@FGFGGGGFFGGFGGGFFGGGFFCFGCFGEGCFGGGGGGGGCGGGGFGGFAEFFGGGGGGGGC9F7AFE7AE8+@F:+@DDGG:DF<:CFGEGGFFFCGGGGGG,,83@FEE*@33DF7**4>EE5C::8>E7::CG6=FGE*@975+;C9:D7:FGGG6@=+0+236B17A)55,4?4*))/3((.(.((- +@M02542:108:000000000-AJUMM:1:1101:12222:1181 1:N:0:4 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGF7>FGGGGGEGEGGGDGGGGGEGGGGGGFDGC?FGECDCGGG6FF>FFFFDDD:CDGEBF=FFDFB3)>=?AABFF6@DFFFF<72:>>7CG:*54,4((-(( +@M02542:108:000000000-AJUMM:1:1101:21019:1182 1:N:0:4 +AAGGCCATGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGCGAATCATCGAATCTTTGAACGCACATTGCGCCCGTTAGTATTCTAGCGGGCATGCCTGTTCGAGCGTCATTTCGACCTTCAAGCCCTTAGGGTTTGGTGCTGGAGCACTACGGCTAACGCCGTAGGTTCCGAAAAGCATTGGCGGGCCTGTTGGATCCCGAGCGTAGTAAATTTTCTCGCTTAGGCGGTACAGCAGTGCACTAGCCACTAAACTACGACGGCCCTTTGGGGCTGTCTCCACT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGCGEEGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGEGGCFGEGFFFGGGGGGGGGGGGEGDGFGGEGGGGGGGFGGGGFG<EDGD>4F88CDC1?4>66<=FFAACAECEC<66A)/688@;?1(()0**+))1)3((-( +@M02542:108:000000000-AJUMM:1:1101:10619:1183 1:N:0:4 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGFGGGGGFGGGGGGGGGGGGGGGEGCBFEFGGGGGGGGGFFGGGD8FFGGGGGGGGCGGFFFECFCGGGGGGGG*:79CF+79CFFGGDGGGCF6<6<>F>?FCCD7CG:4(0795/48@*97>:BF>FF0)(-4?7<2)5**28?)4,69(,) +@M02542:108:000000000-AJUMM:1:1101:10228:1184 1:N:0:4 +AACGCGTTGATGAAGAACGTAGCGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACAATAGTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGAAAAGTATTGGCAAGGGAAGTAATTCTTGTGAAAGCTGTTTATTCAATGTATTAGGTTTATCCAACTCGCTGATTGATAGTGGGAAGAAGTGATTGCTATTAGGCCCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFG9AFCGGGFFFFC?FDEFEFGGGGGGGGGFDFGGGDEGEDGEGGCD;FAFFGCGCDGGGGDGE=FFGGGECFFGGCFEGGFGEGGEGGFGCFGGGGFEFC9E@C::7BFGGFFGDG>CG:+=5?FCB?@F4:AF)))6AAF08(6568CECCAD*@@CGFGGGGGGGGFFFFGEGGGGGGGGGGGGGGGGGGGGGFGGGGFFCFFGFGGGGDGGGGGFGGGEFGFGGGGGGGGGGGGGGFFGGFFGGGGGGFFEFGGAFGGGGGGGGGGGGGGCFGGGGFGGAFGFGGDGCCDFGGGGGFCFF>@CFGCF:EA>?F;FDEFFGFFCFGGGGGFGFE);CC5CGGFFCFFD3339BC0*63;EFFA@63;46A);E36C=CDCFG8DA+64A9FC?E?,CEFFGEDGC,8?FEG8BFGFEGGG;=A@FC7:DGGGAFGGG?FGA>EG6CBC6DFG9;A77DFG?9D77:7@FCGG?EFG5**789+B@DF45CG?FF76A9FF+75;DED8=@@8(6+;<;(,.).64::)))0)-(4,92) +@M02542:108:000000000-AJUMM:1:1101:9801:1184 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGAGTCATAAAGTTATTGTCCGTGAGGACGATTAGAAGCAGACCCTAATAGTGACACGGCCCGTGGTGAATAAAATGTATTACACAGCTAGCAAACGCGCACAGGTCCAAAGCTAATGCATTCAAGAGGAGACGACTTTGCAGCTAGCACTATCCTCCAAGTCCAACACCCATTAGTTGAAAACCATCGACGTTGATATTATCATGACACTCAAACTAGCATGCTCCTAGGCATAGCCAAGGCGC ++ +@<@CC<+B@FC@@6CF@FEGFFAB<9;EGGA,;=>,8+,+3>CEC;DF7,@4EF?F2682D>;DGD7?CF:DFC5?4::*4=:CF,=,;F*:**)2*)01>FG7:+17/+;:=F)*);AC(.2)**8414)))3,)-()**/*,,4,(-((( +@M02542:108:000000000-AJUMM:1:1101:14354:1185 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGCCAGATCATAAAATGGGGTTTAGTAGAGCAAGCTCTATCTAAGAATTAGAAGCGGATCTAAAGACTTTCTTTATCTCGGCCATACTTTCGTATGTCCTCGGCGAAATACTTATCACGTCGAGTGGAACCGATTACAAAAAGGATCTGCTAATTCATTTCAAGCGAGCCGGTTAGTAAAACCAGCAACGCTCAAGTCCAAGCCTTCAGCCTTAATAAAAAAGTTAAAGGTTGAGAGTTTAATGACACC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGFGGGGGGGGGGGGGFGGGGGGGAFFGEGGGGGGGGGGGGFGGGGGGGGGGGCEEGGGGGGGGGGGGGGGGGGGEGGGDGGFGGGGGGGGGGGGCFGGFGGGGGCCCEGGGFGFGEFCFGGFGGGGGGGGGFF@FFG8E5?C5/?EGFGGGGGGGGFCE6=ED>D3AFC7DF+09@FDFF>*84F47=G2F9@A)4234330)*787))6422))( +@M02542:108:000000000-AJUMM:1:1101:12182:1185 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCACATTAATAAAAATTTGTCCAATTTCATGGACTGTTAGAAGCTGAACTTGCTTCACTGTTAACAAGCAGCGTATATAGTTATCACACCAATGAACCGTGAACAGGTTGTTCCGCTAATGCATTTCAGGGGAGCTGAACGTGAAGCCAGCAAAGAAGGAACCACCACATCCAACACTTAACCCAAGATTAGGAGGTTGATATATTAATGACACTCAAACAGTCATGCTCCTCGGAATACTAAGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGG8FFGGGGGGGCGG<<9FG,,19>DEE979CE?2***4,525,*95;40+1?A4**1*00=BFF87+;+)+;:A6((.);=).247?337)4(25/5>@2)6))( +@M02542:108:000000000-AJUMM:1:1101:21696:1185 1:N:0:4 +AAGTTAAGGATGAAGAACGCAGCGAAATGCGATACGTAACGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGAATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAACATCCTTCAACCTTTCTTGGTTTCTTGACCGGGGAAGGCTTGGACTCTGGGGGTTTTTCATTGCTGGCCTCCCTTGAAGCCAGCTCCTCCTCAATGGATTAGTGGGGTCTGCTTTGCCGAGCCTTGACGTGATAAGATGTTTTTACGTCTTGGGTTTCGCACTGTCGTT ++ +CCCCCGGGDGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGCEGGFGGGGGGGGGGGFGGFFGEGFCE7CFGGGGEF8A+BCCF?EEGG6EDFGC4*2?97CFGG?C;C*4:ECDGFCCBFGGD3))9@F?66DFB::6F?CADFF6)),*3((.4)403)7DB51124FFFGG*@FG?@FGGFGGGCFC;DEGGGGFDCF8CBCCGGCCGG5;8E6EFGGFG+;3/=C)=:4:=9++:@EGFC@*9?><7<*>FGF@BFFC5)7)9*12,0-6)5FB7<4:60<;9()/)0*(4((14(8) +@M02542:108:000000000-AJUMM:1:1101:17125:1186 1:N:0:4 +AACCAGTGGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTTGAGCGTCATTTCCCTCTCAAACCCTCGGGTTTTGGTGATGGGCGGTACTTCTTCAGTGAAGTTCGCTTGAAATGAATCGGCACGAGCTGTTTTTGTGGTTTGCCCAGTTTATTCAATGTATAAGGTTCCTCAAACTCGTTGATTGACATGGAAACACCCAGTAACGTCCGGCTCTGCCTA ++ +8CCCCFFFGF>FB,@C=;E7;,3****41?*=1?C6?*:C=8C5::7FFECF7CF7F:;7+34==+++2;A6*:C02:D=A;F3;)/6*9:?C2<:2=:5(596?:4-)(.8CC:312(-)4)6 +@M02542:108:000000000-AJUMM:1:1101:14624:1187 1:N:0:4 +AACGCCACGATGAAGAACGTAGTGAAATGCGATACGTAATGTGAATTGCGGGTTTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTCTGGTATTCCGGAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAACCTTGTGTTTGGTATTGAGTGATACTCTACTTGTGTTAACTTTAAATACGGTTTTGGCAAGGGTGTGTTAAACAGCCGTCGTCCTCGATAATGTATTAGGTTCTACCAACTCGTTATAGTGGAAGGCAGTGTTGTCTAGCATGTAAGCTAGGCCTAACA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG,FEFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG@FGGGGGGEFFGGGGGGFGGGGGEDFGGGGGGGGGGGGGGCCFGGGGGGGA?EAFGD?FGGFGGGCFFCGD8EF9DFFFFGCFFGGDEGGGGGGGFFEF=,858F9FGEGGG?>E@E?CFGEGCE>?CDFFG6CFGGGEC=CCCD*:7>FFCCCFC9+476>CAFFFGGGGG>)/;A+;F26))56<<96**0.(57?D?: +@M02542:108:000000000-AJUMM:1:1101:10957:1187 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACCAGTGGAGACAGCCCCAAAGGGCCGTCGTAGTTTAGTGGCTAGTGCACTGCTGTACCGCCTAAGCGAGAAAATTTACTACGCTCGGGATCCAACAGGCCCGCCAATGCTTTTCGGAGCCTACGGCATTAGCCGTAGTGCTCCAGCACCAAACCCTAAGGGCTTGAAGGTCGAAATGACGCTCGAACAGCCATGCCCGCTAGAATACTAACGGGCGCAATGTGCGCTCAAAGCTTCGACGATT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGDGGGEGGGGBGGGGGFGGGGGFFGGGGGGGGGGFFGGGGGGGGGGGFFGGGGGGGGGCEFGGGGGGGGGGGEEFGGGFGFFGGGGGGGGGGGGGFGGGC@CGGGFGGGGGCFGGCGGG>CGCF@FFGGGGGGGGGGGGG*C6CEGCFD=6CGGGGGFGGFDGG5:CED5*9?)**27C65<3(<5C4@AF?F?GF014;@)473)).(((446:C):69;?(2(34 +@M02542:108:000000000-AJUMM:1:1101:9061:1187 1:N:0:4 +AAGCCTTGGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGAAATTCTCAACCTATAAGCCTTTGCGGGATTTGTAGGATTGGACTTTGGGGGTTTTTCATTGCTGGCCTCCCTTGAAGCCAGCTCCTCCTAAATGGATTAGTGGGGTCTGCTTTTCCGATCCTTGACGTGATAAGATGTTTCTACGTCTTTGGTTTCGGACTGTCGCTTCC ++ +CCCCCGFGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGFAFGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGFGGGGGGGGGGGGGGGGFGGFFEFGGGGGGFGGFEGFGGGGGGGGGGG8EEFFACFGGBDFB@FFFGFGGG>+@DFGG9FFGGGDCFFCBCCC?C>CFG,,>,87,,51>7;,+,CDDC7F78F6>35)+1*/;=9?<4AFB:1)/*))3440:6:1) +@M02542:108:000000000-AJUMM:1:1101:13068:1187 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAATTGTCAAAGTGTATGCGCATCTAAAGAGACACAGCAGATTAGAAGCCGGCAGGCACAGGCACCGAGGCGGTCACAACGGCGATGAAGTTAGACTATCACACCGTGAACCGTCGGGCAACTAACGTGACCGAGCTAATGCATTCAAGGAGAGCCGAACCCCACAATGCAGGGTACCAGCAAGCACCCAAATCCAAGCCACGTCTGATTCACAACCAAACGGGATTGAGAATTACACGACACTC ++ +CCCCCGGGGEGGGGGGGGFGFGGGGFEFGGGEGGGGEGGGGGGGGGFFGGGFGFFGFGFFGGGGGFFFGGGGGGGGGGGGGFFGGGGGCGGGGGFFGGFGGFCFGGGGGC=FG=)*0<8:?(77)(*.).(((,(4 +@M02542:108:000000000-AJUMM:1:1101:15359:1188 1:N:0:4 +AACGCCACGATGAAGAACGCAGTGAAATGCGATAAGTAATATGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCCAAGGGCATGCCTGTTTGAGCGTCATTTCTCTCTCAAATCTTCGGATTTGGTTTTGAGTGATACTCTTCGTCAGACTAAGCGTTTGCTCGAAATGACTTGGCATGAGTGGTACTCGATAGTTCTGAACTGTTTTCAATGTTTTAGGTTTATCCAACTCATTGACCAGTATAGTATTTGTTGATTACACAGCCTCGCAC ++ +CCCCCDGG7@6C-EC,;FCC7@FGFF9,@F+,CFGGF@,CEFFCCCF96C@AFGGGGFAF9FCFFF7FGGGECCF+CE96EFA???,6C8FG7=E@=,@E,*,51;,+525+5<=,41:68C9912++*+)244=4:=6:)/;D8+1+;+8+6>))1++.+7??58,)<.;:+**((,3(-,(, +@M02542:108:000000000-AJUMM:1:1101:18016:1188 1:N:0:4 +AACGCGTGATGAAGAACGTAGCGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACAATAGTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGAAAAGTATTGGCAAGGGAAGTAATTCTTGTGAAAGCTGTTTATTCAATGTATTAGGTTTATCCAACTCGTTGATTGATAGTGGGAAGAAGTGATTGCTATTAGGCCCGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGFGGGGGGFGGGGGGGGGGGGGEFECFGGGGGGGGDFCGGGGGFGGGGFGGGGGGGGGGCFGGGGGGGGGGFGGGGGGCFGGGCGGGFGGACFCGFGGGGGGCGGGGGGGCEGGGFGFGGFGGFF@FGGGFFFA66=DF?DFAFFG?*.1;AF?F08;8?@EC3@*:7CCEC)64;B9 +@M02542:108:000000000-AJUMM:1:1101:8612:1189 1:N:0:4 +AAGGTGCTGATGAAGAACGTAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAATCTTTGAACGCACATTGCGCCCACTAGTACTCTGGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCCTCAGGCGCCCTCGCGGGCCTGGCGTTGGGGCGCTACAGCGCGGTGCGGCCTGGCCGCGCCGCCTGTAGGCCCCGAAATACAGTGGCGGGCCTCCCCGGACCCCCAGCGCAGTAGACTTCTCGCTGAGGGCCAGTCCGGCGCCGGTTACCCTGCCCGCAAGCCG ++ +CCCCCGGGGGGGGGGGFFGGGGGGGGGEGGGGGGGGGFGGFGGGGGGGGGGGGGGGGGGGGGGGGGFGGGFGGFGGGGGGGGEEFFGGGGGGFGGGFGGFGGEEDFDFGGGGGGGGGGGGGGFGGFEGGFGGGGFGGF*:C*?EG>CGF9CFGGGGG*=FFG7CECC=C>FC>@59:?CD7*=>F:3:)4@5*.714))0786)0((-((()669C:9(((43(((( +@M02542:108:000000000-AJUMM:1:1101:15987:1189 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAAATTGTCAAAAGTTGTCTCAGCAAAGAGACGGCTATAAGCAGGCCCTCATAAAATTTGTTTCAAAGCCAAATGGTATAGATAATTATCACACCAAGTGACGGTCCACAAGAGATCCCGCTAATGCATTTAAGGGGAGCAGACCATCCACTGAAGGAAGCCAGCAAAAACCCCCACGTCCAAGCCTAGATGCTTCGCAAGCAAAGCAAGAAGGTTGATAATTTAATGACACTCAAACAGGCATGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGDFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCEEGGGGFGGGGGGGGGGGGGG6FGGGGGGGGGCGCGGGGG7=D5CFGCCGFGGFAC@FDGGGB:@F;94AEFFG4C;A8@FB@AFAFA92982:F0CFF<62BD+<@BFFGG::BBFCCG*>>BF@,+=8FEEGGDC*:@F8*@FGF?8CG>E+;;**2/+3+AC58EG@9/*:9CD7**1>5C*02:=FGG=CCFF57D)97D))-)000)()7*0+.(.8@)5,)-(-((-(((09))*())(-((.) +@M02542:108:000000000-AJUMM:1:1101:16091:1190 1:N:0:4 +AAGGCGCGGATGAAGAACGTAGTGAAATGCGATAAGTAATGCGAATTGCAGAATTCCAGTGAGTCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCATTCCGAAGGGCATGCCTGTTCGAGCGTCATTATCACCTCTCAAGCCCCCTGGGTTTGGCCTTGGACGGCTGGTCGGGCGACGCCCCGACCCCTCCTAAAGACAACGACGGCGGCTTTGTCTGACCCCCGGTACACTGAGCTTCTTAACTGAGCACGTATCGGACCCAGGGCGTCCGGGCCACGGGCCTCTCCCCTCACTGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCECFGGGGGGGGGFGGG?FFGGFGGGGGGGGGGGGG=GCCFGGGFGEGGDCGGGGGGGGGGGGG47:/@CG7DFFGFFF4FDBFF:BGFFBF19:@@B324(49((17>5*5<2(4<.844: +@M02542:108:000000000-AJUMM:1:1101:14182:1190 1:N:0:4 +AAGGCCATGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAACCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCTTGAAGTCATCAACCTCTCCCGTTTCGTGCGGGCTGCCGGTCGGATGTGGGGGCATGCTGCCGTGAGGTGGCTCCCCTCAAATGCTTCGGTTGGACCTGTGGGTCGACCTCGACTGGGCGTTGTACCATCCTCGCTCCTCCGCGAGACGCTCTCCACTTATCGAGTCCTCCCT ++ +CCCCCFGCGCGG-E6FFGGG>GGCC:@FEFF;F,BFGGFECEFF++3@,D73:C7B7FG9FGGCE7>,A88,:C5FGGGC8;+BE9?EECC8=868EGG@4C=:**:*9CD*A55))*95.9)>CCFF=)4*/17:?F6*72((-4)77(5184:)())-*09<*.()).8<( +@M02542:108:000000000-AJUMM:1:1101:14812:1190 1:N:0:4 +CATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGCGTCATTTCTCTCTCAAATCTTCGGATTTGGTTTTGAGTGATACTCTTAGTCAGACTAAGCGTTTGCTTGAAATGTATTGGCATGAGTGGTACTAGATAGTGCTGAACTGTTTTCAATGTATTAGGTTTATCCAACTCATTGACCAGTAAAGTATTTGTTTATTACACAGGCTCGGCCTTACAACACCAAACAAAGTTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATAT ++ +CCCCCGGGGGGGGGGGFCFFCFGEGGGFGGGGGGEFGFFFAEF8F@FGGGFGGGGGGGGGGGGGGCCF*3;??F7CCAAEFFGF*>AA6F?E:>@=AF;654.68=(39EDF439=67?3=E*:BE4BCCG;CF,C,<9?C,,>8++565),877*+.-6(5@F)*33(882).)1**)/(-2(.)48( +@M02542:108:000000000-AJUMM:1:1101:10272:1193 1:N:0:4 +AACCGCGTGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGTCATTCCATGGAGCATGCCTGTTTGAGTGTCACGTTAACCCTCATCATTATGATGTCAAAGTCATAATGGTGGATTTGGATTGTGCCGTAGTTGGCTCATACTGAAATACATTAGCTTGCACTTTTTAGGGTGCTTGGCATGGTGTGATAATTATCTGCGCCATTGCCTTATGCCTTTTCTATGTTTGCTGCTTCGAGTTGTCC ++ +CCCCCGGGCCFGFGFGFGGGGGFGGGGFGGGGFE7FECGGDFFCD,@,7@=EAFGGGFFGF;DF7,@FEA@CFDF*<5DDGFDEEG*,3,,,;CCF:=>75+=B7=BB255D6+88B*+48*9)*977A)5))1,)))*0++/((/()))1 +@M02542:108:000000000-AJUMM:1:1101:14721:1194 1:N:0:4 +AAGACGCAGATGAAGAACGCAGTGAAATGCGATAAGTAATATGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGCGTCATTTCTCTCTCAAACCTTCGGGTTTGGTATTGAGTGATACTCTTAGTCGAACTAGGCGTTTGCTTGAAAAGTATCGGCATGAGTCGTACTGAATAGTGCTTTTAGGAACATTTTCAATGTATTAGGTTTATCCAATTCGTTGAGAATTCTTATTAGTGAATTTTTGGTATATTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGFCFGGGGGGGGFGFGGGGGGGFGGGGEGGGGGGGGGGGGGGGGGGGGF9@FECDFFGDGGGEGGGGGGGGAFFGGGGGGEGGGGGFGDGFFGGGCFG>CCGGGGGGGFFGGGGGGGGGFGGFFDF@+?FCFACAFCA+/;8CFF<4:CFFC3+9CC<BDDFGA<,DCCFGGFFFFEG76C,=:C<8:8?=895*9CEGGGA>7;ADCD5>F71@<76C=6:F=DB3-,4(7)70)((--7(5).*:*)*47824)-. +@M02542:108:000000000-AJUMM:1:1101:22400:1195 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAAACTTCTGAAGTTGGAGTTTTTACGGCTGGATAAACCCGCTAGGACACCCAAAGCGAGAAATAATTTACTGCGCTCGGAGCCCTGGTGAGCCCGCCACTACTTTTAAGGGCCTACAGGGGGGAATCCTCTCGTAGCTAACCCAAACACCAAGCACCGCAGATGGGCTTGAGGGTTGAAAATGACGCTCGAACAGGCCTGCCTGCCAGAATACTAGCGGGCGCAATGTGCGTTCAAAGATTCGAT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGFGGGGGGGGGGGEGCFGFGGFGGGGGGFGGGEDGGGGDGGCFGGGGDFGGGGGGGGGGGGGGGGG?CFGGGCEGGGGGGGGGGFFCEGGFE6EEEEGGD+9?B.)51.9C?FBA(54)4)) 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+BCCCCGGGGAFE9FGCFFFCEEFGEGGGGGG,CBBFCCE:AEEGDEGDGDE>D>9:>))10).790:644447FFGB)3(73(((). +@M02542:108:000000000-AJUMM:1:1101:22380:1196 1:N:0:4 +AAGACAGAGATGAAGAACGCAGCAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCGTGTAATTCTCAATCCCGTTTGGTTTTGAATCAGACGTGGCTTGGATTTGGGAGCTTGCTGGTACCCTGCATTGTGGGGTTCGGCTCTCCTTGAATGCATTAGCTCGGTCACGTTAGTTGCCCGACGGTTCACGGTGTGATAGTCTAACTTCATCGCCGTTGTGACCGCCTCGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGFGGGGGGGGGGGGGGGGGGFFGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFGGGGGGGFGDGCEDGEEEFGGGGGGFGDGGFDF@FCGGGGCDG<:>E:FFF4>DFFF>@<4935/.*08??0 +@M02542:108:000000000-AJUMM:1:1101:12108:1196 1:N:0:4 +AAGACGCAGATGAAGAACGTAGTGAAATGCGATAAGTAATATGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGCGTCATTTCTCTCTCAAACCTTCGGGTTTGGTATTGAGTGATACTCTTAGTCGAACTAGGCGTTTGCTTGAAAAGTATCGGCATGAGTCGTACTGAATAGTGCTTTTAGGCACATTTTCAATGTATTAGGTTTATCGAACTTGTTGAGAGTTCTTATTAGTTAATTTTTGTTTTATTT ++ +CCCCCDDGGGGGDGGGGGGGFGGGGGGGGGG@FEEGGGGGF<=3@9=,,:C8@CFCFGC,3>@,5738+>CGFA4@@5@3*4D:9<,352B,=+A?CF,> +@M02542:108:000000000-AJUMM:1:1101:20513:1197 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATGTCATAAAGTTGTCCACAAGAGACGATTATAAGCAAGAACACTGATATACTTCACGAACACGGCGTAGACAATTATCACACCGAAGAGCGATCCGTAAGATTCACGCTAATATATTTCAGAGGAGTCGACTTGGTAACAAGCCGACACTAACCTCCAAGTCCAAGCCCACCAAATCAACAAAGATTTGAGGGTTGAGAATTTCATGAAACTCAAACAGGCATGCTCCTCGGAATACTAAGG ++ +CCCCCGGGEGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGFGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGCFEGGGGGGGGGGGGGGGFGGGCCCGFDFGDGGGGGDFGGGGGDCG0(3<).6:0 +@M02542:108:000000000-AJUMM:1:1101:22045:1197 1:N:0:4 +AAGACACCGATGAAGAACGCAGTAAAATGCGATAAGTAATGCGAATTGCAGAATTCCCGTGAGTCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTCGAGCGTCATTATCTCCCATCAAGCCCCGTGCTTGGTGTTGGACGGATTTTGGTCGTGCGATACCGACCCCTCCTAAAGATAATGACGGCGGCCTGTGGATCCCCCGGTACACTGAGCTTTTAACTGCGCACGTATCGGACAAGGGAGCGCAGAACCCGGTCTGTGTCCTTTAATCAGGA ++ +CCCCCGFFFGGGGGGGGGGCGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEF@F:F@C<<,CEFE8CFFEBE+*6<**33*14*B*BEF?,A;C,,,,>A9*4:EB:?EC++*+<797>C5))2:7CCC*))-6)))( +@M02542:108:000000000-AJUMM:1:1101:21862:1197 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCTCACCCGATTTGAGGTCAAGGTTTATAAAACTCTGTCTTAGATGCAAGACTGTTTGAAGCGGGGTCTGAAGCGACAGTGCGCAACCCAAGACGTAGAAACATCTTATCACGTCAAGGATCGGCAAAGCCGACCCCACTAATCCATTTAGGACGAGCTGTCTTCAAGGGAGGCTAGCACTGAATAACCCCCAAAGTCCACGCCTTCCCCGGTCCAGAAACCAAGACAGACTGAATGCTGCTGCGGCCACCAAAACGGCTGAGC ++ +CCCCCGEC;8@FD,7AFGG<B>:><5BB>FDFGB:??EF4:FADF?B936?FF>FFA447B9AD4 +@M02542:108:000000000-AJUMM:1:1101:19106:1198 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATTTCAAAGTCGAGCTTTGTTGACCGCCACCCCACGGGCAGGTCTAGGGAGGACTCGATAAGTGGAGAACGTCTCTCGGAGGAGCGAGGATGGTACAACGCCCAGTCGAGTTCGACCCATAGGTCCAACCGAAGCATTTGAGGGGAGCCACCTCCCGGCAGCATGCCCCCACATCCAACCGACAGCCCGCACGAAACGGGAGAGGTGGAAGACTTCAAGACACCAAAACAGGCATGATCCT ++ +CCCCCGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGG7FGGGGGGGGGGGGGFGGGGGGG,8FFF,?,?;?CF?F*B7C*8,6,6,@*247*:*=C*8*2*=?*=:5E0+0<<*/9CG5*+28C69*:=CDF37.797)*9DC:5()7*8).))**241<9F=*-91(4,(4(,3)2*)*)4))))- +@M02542:108:000000000-AJUMM:1:1101:17001:1199 1:N:0:4 +AATAAGCCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAATATATCAACCTCCTCAACTTGTGTTGAGTGTTGGATGTGGGGGTTCCTTCTTTGCTGGCTTCACGGTCAGCTCCCCTGAAATGCATTAGCGGAACAACCTGTTCACTGTTCATTGGCGTGTTAACTATCTACGCTGCTTGTTGACAGTGAAGCAAGTTCAGCTTCTAAC ++ +CCCCCGGGGGFGGGGGGGGGGGGGGGGGGGG7FGFGGGGGGGGGGGGGGGGGGGGGGGGGFEGEGGFGGGG@FFGGGGGGGG>FGGGGDFGGGGGGGGGGFGFGGGGGGFGGGGGGGGAECFGGGGGEEEGGGGGGGGGGGGGG8EGGFFGFEE:FFF9FGG7FEFDFGGGGGAEGECGFGFGGE5CGBDGGCFGCFF:89EDCC?E?F,9CC5=6C?EF=?FBFFF6254:((0:017<)).64A4) +@M02542:108:000000000-AJUMM:1:1101:18647:1199 1:N:0:4 +AACCGAGGGATGAAGAACGTAGCGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGGACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACAATAGTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCCTGAAAAGTATTGGCAAGGGAAGTAATTCTTGTGAAAGCTGTTTATTCAATGTATTAGGTTTATCCAACTCGTTGATTGATAGTGGGAAGAAGTGATTTCTATTAGGCTCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGFGGGGGGGGGGGFGG7FGGADGGCGGGGGCEFGGGGGGFGFGGGGFGGGFFGGGGGGGGCFEFCFGFFFG>FGFEFFGFFFAFCGC@;9EG>CGGGGF7:@CFFFGFF>FGGGGFCABFFGEFFA:FF+.939A1;0A/8;446=?C7+;+:5?C?E@//4 +@M02542:108:000000000-AJUMM:1:1101:10133:1199 1:N:0:4 +AACCAACTGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCTATTCCGAGGAGCATGCCCGTTTGAGTGTCATGTTAATATCAACCCCGACGGTTTTTAACTATTGGGTGTTGGACTTGGAGGATAGTGCTGGCTGCAAAGTCGGCTCCTCTTGAACGCATTAGCTTTGTACCTGTGCGCGTTTGTTAGCGGTGTAATACATTTTATTTACCACGGGCCGTGTCACTATTTGTGTCCTCTTCTT ++ +CCCC@FGGGGGGGGGG?DGFFFGFD:@F,>E6@EC;7C;*16;BFFE,,,24/:889,=:EC71+:CEDGG,*/9:C=**)+3;))*:D2:*9*5@F*61)7**/+)3-()0)-)-2()4625)*:*80-))--46)) +@M02542:108:000000000-AJUMM:1:1101:17292:1199 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTACCTGATTTGAGGTCAAACTTTGGTTTGTTTGTTGTAAGGCCGGGCCTAATAGCAATCACTTCTTCCCACTATCAATCAACGAGTTGGATAAACCTAATACATTGAATAAACAGCTTTCACAAGAATTACTTCCCTTGCCAATACTTTTCAAGCAAACTCAAGCATATAACCCGAGTATCACTCAACACCAAAACTATTGTTTTGAGAGAGAAATGACGCTAAAACAGGCATAACCTGTGGAATAACACAGGGTGCAATG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGEFFGFCFGGFGFFGGGGGGGG?FGGDDEGGGGGGGFFGGFFCFGGGGGEFGC=FFGGFBEF=CG@FEGFBEFGGFAFGGFDGGGGFGGFEGFFFF?FGFGEFGFGGGGFGDFGGGGGGGGFGG?:DECFF9DCFFCEGGFGFGGGGC;A;B;CCE*;:@CCEGCGGGGGGGG5CFCFGCGGG9AC<>>CGGDGFCFF=A5*)),;**5?=(()/2=;=;>817<)))/2;FC:(,(10<9) +@M02542:108:000000000-AJUMM:1:1101:22794:1200 1:N:0:4 +AACTCGCTGATGAAGAACGCAGTAAAATGCGATAAGTAATATGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAGAGGGCATGCCTGTTTGAGCGTCATTTCTCTCTCAAGCCCTCGGGTTTGGTATTGAGCGATACTCTTAGTCAGACTAGGCGTTTGCTTGAAAAGTATCGGCATGAGTAGTACTAGATAGTGCTTTCAGGATATTTCAATGTATTAGGTTTATCCAACTCGTTGAGAATTCTTGGTAGTGAATTTTTAGTATCATGGT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9FGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGC?F7CGGGGGGGFGFD8BCB7:FFFFFFCFAGFF0=FGA6367CAAFFFFFGC@+CDFGDB::@=<=>>F:C>EGFFFGA,@B=FGGGF>F,DEFCGCGGGGCEGGFFF55EGGGG5CF*=CFF+41<+3>?<5>EGG3F>FF5CD9**:@64@=4)*4FF7FFDF:B4=?>F?D7?24)(.0*7;44)4)-434 +@M02542:108:000000000-AJUMM:1:1101:8738:1200 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAATTGTCAAAGTGTATGCGTATCTAAAGAGACACAGCAGATTAGAAGCCGGCAGGCACAGGCACCGAGGCGGTCACAACGGCGATGAAGTTAGACTATCACACCGTGAACCGTCGGGCAACTAACGTGACCGAGCTAATGCATTCAAGGAGAGCCGAACCCCACAATGCAGGGTACCAGCAAGCCCCCAAATCCAAGCCACGTCTGGTTCAAAACCAAACGGGATTGAGAATTACACGACACCC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFFEGFDCE=EGGGGGGGGFGGDGGC9FFGGFGGGFFGGGDFGDFFD*>EGGGFGGCGGGGGGGGGGGGGGGGG?FFFGGGDGFC:88C7E5**::+*0?7C>?CFFFF6FGG5C3>5DF6FFDFFGC))20.*5)-79C=FA??BF4.(8:0211<<:6**:@*.,4716(3 +@M02542:108:000000000-AJUMM:1:1101:16968:1201 1:N:0:4 +AAGGTATCGATGAAGAACGTAGTAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTGCAACCCTCAAGCCTAGCTTGGTGTTGGGGCCTGCCGCACTGGCAGCCCTTAAAACCAGTGGCGGTGCCATCTGGCTCTAAGCGTAGTAACTTTTCTCCCTACCGGGTCCCGGTGGATGCTTGCCATCAACCCCTAATTTTCAATGGTTGATCTTGGATCAGGTAGGGTT ++ +CCBCCGGGGGGGFFGFCDCGFGGGGCDECGGC,@FEFDCGGFGGGGCCCCGGGG9CC7FFECFE>E?EDGGE?=CGGCC6?,,?*44?*>999797C1:+**0=**2:/>F5=)753)947:C*9<4*(*7*7525>*9CAF4)***(9<(()6<))5)*2>=3>)8(,(. +@M02542:108:000000000-AJUMM:1:1101:9489:1201 1:N:0:4 +AACTCGCTGATGAAGAACGCAGTGAAATGCGATAAGTAATATGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAGAGGGCATGCCTGTTTGAGCGTCATTTCTCTCTCAAGCCCTCGGGCTTGGTATTGAGTGATACTCTTAGTCAGACTAGGCGTTTGCTTGAAAAGTATCGGCATGAGTAGTACTAGATAGTGCTTTCAGGATATTTCAATGTATTAGGTTTATTCAACTCGTTGAGAATTCTTGGTAGTGAATTTTTACTATCATGGC ++ +CCCCCGGGEGGGDGGFEGGGGGGGGGGGGCGGGGGFGGGGGGGGDG@FGGEFGGFGGGGGGGGGGGGFFGGGGFGGGGGGGGFEGCFG:FFF:FGGGGGGFGFGGFGFD74AFGGFGEDAF<BFGCF,FFA@8@FFGCE@EDG9CC::DFGGFFFC*3@CFGGG9;<7EE>9?CFCFGFF7=A2:FGGGGGF,,::AFC+=B:DF+:0++8BFCCF0=3C3C(.4):::4*/)/;(17??A>F5*)1);6?3)( +@M02542:108:000000000-AJUMM:1:1101:14326:1202 1:N:0:4 +AACCGAGGGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTCGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGAAATTCTCAACCTACAAACCTTTGCGGGTTTGTAGCGTTGGATGTTGGAGGCTTTTTGCTGGCCCAGTCAGCTCCTCTTAAATGCATTAGCTTGGTTCCTTGTGGATCGGCTGTCGGTGTGATAATGTCTACGCCGCGACCGTGAAGCGTTTGGAGAGCTTCTAATGGTCT ++ +CCCCCEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEFGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGAEGGGGFGGGGGGGGGGGGGGGGGGGGGFFEDFGGGGGGGGGGGFGGGGGCGGFGGGGFFGGEFFGGGG?FGGGGFFGG?FFGGGGGGCGGGGCGFGGGFG=CFC7AFG=*:CFGGFFGGGCGGGFFFFFCB@FD:C>C9>9:>559:91:>2:4<:B1FFC>763,3?DE>B9>F;416:AF3)0>08(((4: +@M02542:108:000000000-AJUMM:1:1101:16372:1202 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTGCCTGATCTGAGGTCTAATCTTAAGAATGACTAGATGGGTTTGAAGCTTCTAACTTTTCATGTCTCGGCCACTCTGAAAAAGTGTCCTCAGCGAATAGTCTATTACGCTGAGTCAATCCGATTACGAAATTGAGATGCTAATGTATCACGAGCGAGCTAATTACATAGCAGCGTTCAAAATCCAAACACCACAGCAGTTCAACAAGGAACCGGTGGGTTGAAGAGTTCATGACACTCAAACAGGCATGCCCTCCGGAATC ++ +CCCCCGGG>CEGGGGGGGGGGGGFGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGFGGGGGGGGGGFFFFGGGGFGGGFEFFE7CGGFFGGGGGGGGGGGGGGGGGGCGEGGGGGGGGGGGGGGGECGFGGGGGGGGGGDGGF8FBD>:>CFGGGGFC7??>C,*/AFCCGG33>BCA+.8=+@?53<71(413976)*(4024?3() +@M02542:108:000000000-AJUMM:1:1101:20276:1203 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTACCTGATTTGAGGTCAAACTTTGGTTTGTTTGTTGTAAGGCCGGGCCTAATAGCAATCACTTCTTCCCACTATCAATCAACGAGTTGGATAAACCTAATACATTGAATAAACAGCTTTCACAAGAATTACTTCCCTTGCCAATACTTTTCAAGCAAACTCAAGCATATAACCCGAGTATCACTCAACACCAAAACTATTGTTTTGAGAGAGAAATGACGCTCAAACAGGCATACCCTGTGGAATACCACAGGGTGCAATG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGDEGGGGGGGGGGGDGGFGGGGGGGFGGGFFGGGGGGGGGGGGFGGGGGGGGGGGGGDDDEF9FEDFGCFFFCAFF;);?7?*??=8>8BD35:FBCFE0;?@6;A1A@333;3AFGGGGFFGGGDEGGDCFGG6E>CFFGGFGFCDFGFGDGGCGGGGGGFDGFGCD>FDDCEGGGGCCFF:FG46>44//C578>:B>4+;B)?7FCAA02*65FGFGFGEGF6EGGDC,,7**27D3:0;FC+)15365;<==CFEGEE>EGFGGGGBFFGDFGGCGGGB?8,2;CCFFEFGFGEC=?CEGGGCCCC+:FDFFFCF>E:CGC**1*;@**2)>D7CFB)/19>F6:*07:4)54=6F)/3><2,-( +@M02542:108:000000000-AJUMM:1:1101:17350:1204 1:N:0:4 +AAGGCGCGGATGAAGAACGTAGTAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATATTTGAACGCACATTGCGCCCAATGGTACTCCACTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAGGCCCGGCCTATTGTTGGGGCGTTGCGGCTCTGCCGCAAGCCCTAAATTACAGTGGCGGAGCGACGCGAGTCCCCGGCGCAGTGATATAAACTCGTCGAGGGACAGCGGCCGCAGCAGCCAAAATCTCAAACCTTATAGTTTGACCTCGGATCAGGTAGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGDGFGGFGGGGGGGGGGGGGGEEGGGGEGDGG>E@FGGGGGGGGGGGGGGGGGGEGGGGG=EEGGFDFFFDC5DDC7>>BFFG4):FF79?ADF?FF?A*64:ADB4<9FDC)>>17?A2?0 +@M02542:108:000000000-AJUMM:1:1101:16602:1204 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAAACTTGTTTGTTGTTTTGTAAGGCAAAGCCAAATATACCAAAAATTCACTAATAAGAATTCTCAACGAGTTGGATAAACCTAATACATTGAAAATGTTCCTAAAAGCACTATTCAGTACGACTCATGCCGATACTTTTCAAGCAAACGCCTAGTTCGACTAAGAGTATCACTCAATACCAAACCCGAAGGTTTGAGAGAGAAATGACGCTCAAACAGGCATGCCCTTTGGAATACCAAAGGGCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGECFDGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGFGGGGGGGGGGGGG>EGGGGGFGEGGGGGGGGGGFDGGGFFGGDGEEGGFGGGGGGGGFGGGGGGCFFFFGGGGGGGGGCEGC>6?BCF9CEFG8<>CEGCGGFFC6:FCCGFF;+**5BB<@>EFGGGFF7,,5;F7@69FF<>FAFFFF=30,(/*96@>FCA)40(-4:: +@M02542:108:000000000-AJUMM:1:1101:10301:1205 1:N:0:4 +AACCAGTGGATGAAGAACGTAGTAAAATGTGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTCTGGTATTCCGGAGAGCATGCCTGTTCGAGTGTCATGAACTCTTCAACCCACCGGTTCCTTGTTGAACTGCTGTGGTGTTTGGATTTTGAACGCTGCTATGTAATTAGCTCGCTCGTAATACATTAGCATCTCAATTTCGTAATCGGATTGACTCAGCGTAATAGACTATTCGCTGATGACACTTTTTCAGAGTGGCCGAGACCTCA ++ +CCCCCFF@EEFGGGF:;:EG7@6CG5CEC66:+BF<*:CD??8CCA>6@CFF5>50)6)6*6)/3?)(6?)4.+/2593(46()), +@M02542:108:000000000-AJUMM:1:1101:20789:1206 1:N:0:4 +AAGACAGAGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGCACTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCCACCATCAAGCGCTCCCGCTTGCGTTGGGGCCTCTGCGGCTGCCGCAGTCCCCGAAAATCAGTGGCGGGCTCGCTGTCATCACCGAGTGCAGTAGTTCTCTATCCTCTCCGCGATGCAGCGCCCCTTGCCGTCAAACACCCCCCCAACTTCTCCAGGTTGACCTCGGTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGFGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEEEGGGGGGGGGGGGGGDGGEGGGGGGGGGGGGGGCEGGGGGG8EGFGFFFGFFGDD)85DCFCCD)0>0>:>BF0?FFFAFF<)C+=CGFGFGDFFGC<:>FF:<*>FGCEDC7D9:C+?CGGGGGG5C88/CECE==5*:E7>7/7)>5C:+:+3A6:?C>=*29C7C44?>()01<>-)835580,100775629>((-(-7>*7*-(4.4((4- +@M02542:108:000000000-AJUMM:1:1101:19227:1206 1:N:0:4 +AAGACAGAGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCGTGTAATTCTCAATCCCGTTTGGTTTTGAATCAGACGTGGCTTGGATTTGGGAGCTTGCTGGTACCCTGCATTGTGGGGTTCGGCTCTCCTTGAATGCATTAGCTCGGTCACGTTAGTTGCCCGACGGTTCACGGTGTGATAGTCTAACTTCATCGCCGTTGTGACCGCCTCGG ++ +CCCCCFGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG:F@FGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGFGGDFF?A?FBF0>BDBC2<>FF??DFFAA)36(3;@>2>FG324?B<9*9.)43:4)4))4?7*9*444))-)). +@M02542:108:000000000-AJUMM:1:1101:16279:1207 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTAAGCGGGTAGTCCTACCTGATTTGAGGCCAAAGCTTTAAAGTGTATTGTCCGTAAGGACGACTATACGAAGCATCAATGAAGAGGTCCTAAGGCTGTGTCGTAGATAATTATCACATCGGTGCCTGGCACTCTAACAGCGCAGGCTAATGTATTTCAAGACTTGCCGACCACGGCACAATCCAAGTCCACCTCAACAAATCGAGCTAACACACTGAGGGGGGAAGGTCACGTACCCATCAAAAAGCACTGCCTCGACTAATAACATGGGTACA ++ +CCCCCFGEGGGGGGGFGGGFGGFGGGG,EFFGGGGGCFFGEFGGGGGGGGGGGF88FGGECC,E,<,CCFFEFFGG,,BCE@F,,C6C@6FFF,,6C6+<,69,5,5EFE,,5,9C,,:,4:?AE,?BFFCG9F9,CF99EFF,AC74@+4,8+,,,,:?F,,8:,+8=+3+,,@=E,CEA,@9;@973,;,>+3++4*3>*3>>,??D,,,?D,C,,1=,,;C6,,**0**44<*<62**+*)**)))1**/0*))-))*)*).)2*+)(,,0))(*(.2-(,(()*****)(.((),) +@M02542:108:000000000-AJUMM:1:1101:22112:1208 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCACATTAATAAAAATTTGTCCAATTTAATGGACTGTTAGAAGCTGAACTTGCTTCACTGTCAACAAGCAGCGTAGATAGTTATCACGCCAATGAACAGTGAACAGGTTGTTCCGCTAATGCATTTCAGGTGAGCTGACCGTGAAGCACGCAAAGAAGGAACCCCCACATCCAACACTCAAAACAAGTATAGGTGGGTGATACATTCATGACACTAAAACTGGCATGCATCCTGGAATCCCATATA ++ +CCCC@FGGGGGCFFFDCDFADFFFCEGCFFCCCCC@;CFEFF6CEE,EEEEDGGEFGGFD>4E?FD;B55?FGAE?,4DF<37@CCFGGFCA<;EGGFEFGGC;2DBEF9,?>8EEGFB?FC?@F,>FFFE;B/@065**1**9C)9)*/:994=*0)+)6<27**-*)).8<<-)-6:F?F((((.).4 +@M02542:108:000000000-AJUMM:1:1101:22428:1208 1:N:0:4 +AACCGAGGGATGAAGAACGTAGCAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTCTCATGGAATTCTCAACCTTCAGCTTTATTGATGAAGGCTTGGACTTGGAGGTCGTGCCGGCTCTCGTAGTCGGCTCTTCTGCAATGGATTAGTGCGAACGTTACCAGCCTCTTCAGCGTGATAATTATCTGCGTTGCTGCGGTGGGTATTCTAGTTTTCACTCTTCTAACTGTCTT ++ +CCCCC@7CE@F>>E5C,@DGG,2,6>8,,F:;7=0>>CA=46)7)9@BB*A):)9>7*7464)--)-6 +@M02542:108:000000000-AJUMM:1:1101:13947:1209 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCACATTAATAAAAATTTGTCCAATTTAATGGACTGTTAGAAGCTGAACTTGCTTCACTGTCAACAAGCAGCGTAGATAGTTATCACGCCAATGAACAGTGAACAGGTTGTTCCGCTAATGCATTTCAGGGGAGCTGACCGTGAAGCCAGCAAAGAAGGAACCCCCACATCCAACACTCAACACAAGTTGAGGAGGTTGATATATTAATGACACTCAAACAGGCATGCTCCTCGGAATACCAAGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDEGGGGGGGGGGGFGGGGGGGGFGFGGGFGF>CEEGGGGF=FC>>EGCFGGGGGGG9+=:8)?DCD5CFG6AEFFGAFFFFDFG@;;BFCE8EGGGGGGFFFFF8=FGGGGF:)29CCGC6EGGFGCC<5>EGGFGFFFGGGG:>C??46:DBB(89*1+.45296F)9(.3:?222(7D:5/(48)-)20( +@M02542:108:000000000-AJUMM:1:1101:20990:1209 1:N:0:4 +AACCACTCGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGCCCTCCCTCTGCGGGGGCCGTCTCCGAAATAAAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCAACCTCGCACCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAACTTTCTGA ++ +CCCCCGGGGFFGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGFFGGCGGGGGGGGGGGGGGGGGGGGGGDGGGFFGGGGGGFFFEFGDGDGGCCGGFGGGGFGFEE:FGGGDCE8CGG>FGDGGEFE+0:CEDGGCGECCEGGGGDDG<6F4DGDBD107DEFF3@G:E9>>F3??6:36??(3>>5)>?1<EGFEGG=E>8FGC+:EFF:5F*29C==F7=?FF33))17515***92@?C=C24,(8:5:FB(-(,4>?(9C277(,8?ECEFFCEGGGGGGD=DCFFGD:EC>CCCFGGGD=7E>3>4)96>>974.0)65)). +@M02542:108:000000000-AJUMM:1:1101:15011:1210 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCTTGTCCGACCCGAGGCCAACCTGTAGAGGTGTGACACTGGGTCCACGGTTTTACGGCAGGCCACCCAGGCGTCCCGAAGCGTAGCGGTAAGTTCTACTGCGCTAAGGAGGAGCCGCGCTGGGGGCCGCCACTGCATTTCGGAGCTGCGGGACGCTTGGTCCCGCAGGCCCCAACACCAAGCCGAAGCCTGAGCGGTGATGCGACGCTCGGTCGGACATGCCCTCCGGAATACCCGCGGGCGCAATGTGCGTTCACAACTTCG ++ +CCCCCDGGG@FGGGFGFDFFFGGGFGGAEFGEGDCFGGGGGCFDA;@CCGGDGGGGCGGGG@CFC9FFGGGGGGGGGGFFGGGGGGGFGCGGGE7FG7CF:B@FEFDGGFFGGGGCFDFGGCFGC@FDGCCFGFFGGG9FFG7+<<>C7:FFGGDGGGC*>>C;;C<+08/:C:CEEEDED8*/A5E85C=):/7*9>C6*/*;)/0C*.)9/977CG:6?FF:67:.5*0*,-)()).(89>;(,()667757DF)6,,)).( +@M02542:108:000000000-AJUMM:1:1101:16004:1210 1:N:0:4 +AAGACGCAGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACCCTCAAATCTTTGTTGATTTGGTGGGCTTGGACTTGGAGGTTAGTGTCGGCTTGTTACCAAGTCGACTCCTCTGAAATATATTAGCGTGAATCTTACGGATCGCTCTTCGGTGTGATAATTGTCTACGCCGTGTTCGTGAAGTATATCAGTGTTCTTGCT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGFFGGGGGGGGGGGGGGGGFGF@FFGFGGGGGFGGGGGFGDGGGFECFFGGGCGGGGGGFGGGGGGDGGGGGGGGGGGGFFGDEFEEGGGGGGGFF7>DGGGGGGGGGGGGCFGGGCFGEC5D>CGFFGG<327CE=CFFGFFFFFFF56,1;>.>933,,(6<:<29C*7:2<9494 +@M02542:108:000000000-AJUMM:1:1101:11816:1210 1:N:0:4 +CCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTACCTGATCCGAGGTCAACCTGAAAAATAAATAGTTAAGACCGGGCCAAGACAACCGCCTCAGTGTATGCTTATAGCTCGCTGCACCTGGGGTCTGATTTTGACACCGCCATTATCTTTCGGGCCAATCGCTTTCGCGATAAGGACCCAATAACAAGCCGGGCTTGAGGGTTGATAATGACGCTCGAACAGGCATGCCCTTCGGAATACCAAAGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGCAATT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGFGGGGGFGGDGGGGGGGGGGGGGGCCFGGGDGGGGGGGGGGGGGFFGFGGGGGEGGGGGGGGGGGGGFGGGGGGGGGDGGGEGGGGFC18EFG+AFGGGGGGGGGGFDFFG=FGGGC7EGGGFGGFFGGF<4533)()0**0)977>A:AA46=@D34))6<<4))***/0-)-):4)64 +@M02542:108:000000000-AJUMM:1:1101:9562:1211 1:N:0:4 +AAGCCTTGGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGAAATTCTCAACCTATAAGCCTTTGCGGGATTTGTAGGATTGGACTTGGAGGTTTGTCGGCTTGCGTTGGCTCCTCTCAAATGCATTAGCTTGATTCCTTGCGGATCGGCTCTCGGTGCGATAGTTTTTTGCGCCGCGACCGTGAAGTGCTTGGCGAGCTTCTAACTGTCCC ++ +CCCCCE,F@EEFEGGFDCCE7:@FDFDFGGG7@@6FEFEFFEFFFECFFGGCFGGGGGGGFDFCFG@AFFB,?5A@@>,5?+34+@B?,203(75*)*)-641(--(7C99:4-98E:9F=@5;;@ED@ECFC?F,,3,,,5:,@@E9D7AFCCF9FGC7=,=7;,=?B72;EGGEG*=F+:).>)198D*;6)/9*/8)/*29:432()05071(26)-4):/*:)*.(1))54) +@M02542:108:000000000-AJUMM:1:1101:8567:1211 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACATTTCAGAAAGTTGGGTGTTTAACGGCTGTGGACGCGCCGCGCTCCCGGTGCGAGTGTGCAAACTACTGCGCAGGAGAGGCTGCGGCGAGACCGCCACTGTATTTCGGAGACGGCCCCCGCAGAGGGAGGGCCGATCCCCAACGCCGACCCCCCGGAGGGGTGCGAGGGTTGAAATGACGCTCGGACCGGCATGCCCGCCAGAATACTGGCGGGCGCAACGTGCGTTCAAAGGTACGATGAT ++ +CCCCC6CFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEFGFGFGEFGGGGGGFGGDGGECEGGGGGGGGGGGGGGGGGGGBF9FFFGGGFD7FEEGGGGGGGFEGGDFEFGGCCCEGGGGGFFGGFGGGGDFGGG@F:BE8CE8CGDEEEEGGGGGG>*AFEGGCECE*?CGCGGD=55CC8*9CDGCC<*:CE+B:3<@?<6679?0390B8)-7(,8@FFFGGCGGFDFGFG:7CGG<7FFFFGGCFEC:>EGDFF,CFFFGGFGCFEGG>CF*:BEGGCFF7FECCE***=FGGG+<@F+*21AEFGEEGGGD8>5AECECFGCC=55?>)5:CDCF:FB),6>((((,(/*2594?BB)((-4 +@M02542:108:000000000-AJUMM:1:1101:17446:1212 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAATTGTCAAAGTGTATGCGCATCTAAAGAGACACAGCAGATTAGAAGCCGGCAGGCACAGGCACCGAGGCGGTCACAACGGCGATGAAGTTAGACTATCACACCGTGAACCGTCGGGCAACTAACGTGACCGAGCTAATGCATTCAAGGAGAGCCGAACCCCACAATGCAGGGTACCAGCAAGCTCCCAAATCCAAGCCACGTCTGATTCAAAACCAAACGGGATTGAGAATTACACGACACTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGFGGGFGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGCGGGGGGGFGGGGGGGGGGGGGGGGGGGGGDFGGGGDGGGGDC9CGGCEFGGGGGGGFGGGGGGGGGGGGGGFCFGFGGGGFGGGCE+667*>CG3:FBFF5<=<=FG*24:?F:571)(41(4234)/2:*:7061(()( +@M02542:108:000000000-AJUMM:1:1101:13339:1212 1:N:0:4 +AAGACCGAGATGAAGAACGTAGCAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCGTGTAATTCTCAATCCCGTTTGGTTTTGAATCAGACGTGGCTTGGATTTGGGAGCTTGCTGGTACCCTGCATTGTGGGGTTTGGCTCTCCTTGAATGCATTAGCTCGGTCTCGTTCGTCGCCCGACGGTTCACGGTGTGATAGTCTAACTTCATCGCCGTTTTGACTGCCCCGG ++ +CCCCC,@@FEGGGDFGEC@CC:FGGCF+8>8B,5,<7;DFFCC@B:9CC9C79?CD5*47=>45/*:39*771)/0),***57:EEC=+.64)*99)16<):@CAFFFAF5D5?F)6713:(() +@M02542:108:000000000-AJUMM:1:1101:13594:1212 1:N:0:4 +ATGCTTAAGTTCAGCGGGTAGTCCTACCCGATTTGAGGTCAAGTTGTCAAATGCTGACTAGCAGCAGTCTCTAATGAGACGATTAGAAGCATGAAACCAAAGTCAAAGACTAAACCACGGCGAAAAACTTATTACACCGGGCATCAAGCGCCTAAGCCTTTGCCACACTAATACATTTGAGAGAAGCCAGTAATGAAACCAGCAAGCTTCAAGTCCACCTCCTTCGACACGAAGTCTTAGGTGTGAGATTACAATGACACTCAAACGGGCATACCCTTCGGAATACCAACGGGTGCAAGGT ++ +CCCCCFGGGGGGGFGDDGG@;6FFGG9@CC@@@CCFG?@CF9CFGGGGGCGGCCDFFFGF@C@CEDGFGFEC3=@FGFFGGGC,@FCADGGB9>BAEA>DE5B?2D5:,?;,62=,=9CFCFCC8C5D7*=)::;++;:@61*;>7::CFDGF++/:AFAF5454A3.*-42:F8))7:<(:082A0*2*))(,,(.4),) +@M02542:108:000000000-AJUMM:1:1101:9325:1213 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAATTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATGTCATAAAGTTGTCCACAAGGGACGATTATAAGCAAGAACACTGATATACTTCACGAACACGGCGTAGACAATTATCACACCGAAGAGCGATCCGTAAGATTCACGCTAATATATTTCAGAGGAGCCGACCTGGTAACAAGCCGACACTAACCTCCAAGTACAAGCCCACCAAATCAACAACGACTTGAGGGTTGAGAATTCCATGAAAACCAAACAGGCATGCTCCTCGGACAACACAGG ++ +CCCCCGGGGGGGGGGGGGGGGGGG-EFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFCGGGGGFGGCFG:EGEG>FG,6,FGGFGFG4/.()02.56***0A(2,45.)3B((((())6)9*:**(-23((), +@M02542:108:000000000-AJUMM:1:1101:20398:1213 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTACCTGATTTGAGGTCAAACTTTGGTTTGTTTGTTGTAAGGCCGGGCCTAATAGCAATCAATTCTTCCCACTATCAATCAACGAGTTGGATAAACCTAATACATTGAATAAAAAGCTTTCACAAGAATTACTTCCCTTGCCAATACTTTTCAATCAAACTCAAGCTTATAACCCGAGTATAACTCAACACCAAAACTATTGCTTTGAGAGAGAAATGACGCTCAAACAGGCATACTCTGTCGAATACCACAGGCTGCAATT ++ +6@C-A<@FBFCEC@D8FGF;FAGFDG9,6@AED?97>,DDGGGGEGG>5EFFC,,2,+,479*19798CEC:F,,2=+*+0;*9**;*1?4;65:>1=AGFA(2=)8/+/177)/(3;1>)*0);0,,4(()<) +@M02542:108:000000000-AJUMM:1:1101:14749:1213 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGAGTTCAGTCAATTGTCTCAAAAGAGAGACAGTTAGAAGCTCGCCAAACACTTCACGGTCGCGGCGCAAAAAACTATCACACCGAGAGCCGATCCGCAAGGAATCAAGCTAATGCATTTGAGAGGAGCCGACGCAAGCCGACAAACCTCCAAGTCCAATCCTACAAATCCCGCCAAGGCTTATAGGTTGAGAATTTCATGACACTCAAACAGGCATGCTCCTAGGAATACCAAGACGCGCAAGG ++ +CCCCCGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGFGGGGGGGGGGGGGGDBFFDEGGGGGGGG7FGGDCCFGGGGGFCFGGGGGGGGFGCGGGGGEEFGGGGGGGFFEGGGCF?FGGGGGDGGGFG6:<7<35*9=78><<66C*:>*?D?=>67*))46=FF*((.,77?EGGGGGG@FECGFGGDF@E8:EEDGD+C:FGGDGGFCE*:CG?/;C/*:**2:;CCD5?85;7:<>C?FF9C<)<5C*69<:7?D?4)*)86DFG:*,3<46**-1.494:7)56:9C)9<58((,4;9 +@M02542:108:000000000-AJUMM:1:1101:15087:1214 1:N:0:4 +AACTCGCTGATGAAGAACGTAGTAAAATGCGATAAGTAATATGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAGAGGGCATGCCTGTTTGAGCGTCATTTCTCTCTCAAGCCCTCGGGTTTGGTATTGAGTGATACTCTTAGTCAGACTAGGCGTTTGCTTGAAAAGTATCGGCATGAGTAGTACTAGATAGTGCTTTCAGGATATTTCAATGTATTAGGTTTATCCAACTCGTTGAGATTTCTTGGTAGTGAATTTTTAGTATCATGGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFGGGGDGG,@CFGFGGGGGGGGGGGGGGGGGFFGGG9FFFGGGGGDECGGGGFGGFCAFFGGGGGGFGGGGGGGFGFGFGFGGGFGGGGGDGGG7,+==@2CF9C@88C7=CCC<,C?@?F@FFCD<,8@C8E8DF@:++@ECB88,,,@CCCCF,=?F9?DG,:?7AE*=*FG*9*..1120(8) +@M02542:108:000000000-AJUMM:1:1101:17248:1215 1:N:0:4 +AAGACTCTGATGAAGAACGTAGTAAAATGCGATAAGTAATGTGAATTGCAGAACTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACTCCATGGTATTCCGTGGAGTATGTCTGTCTGAGTGTCATGAAACTCTCAATCCCTCCACCTCTGTCTGTCATTGGTTGGCCTGGGGCTTGGATCATGAGCGCCTGCTGGACCTGTGTATCAGCTCGCTCTAAATTTATTGGCAGTCTGCTTCTCTTGCCCCTGCATGTGGCAGATCTGGTGTGATAGTCATTTATTCATCAGGTTTTGTTG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGFGGCGFGGGGGGGGFGGGGFFGFGGFFFFC7D4DFFFFFGFFBFFFFGEBBFFFFCFEFEF?EEFF7:C=G4>@FDFF;( +@M02542:108:000000000-AJUMM:1:1101:8939:1215 1:N:0:4 +CCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATCCTTATCTGATCTGAGGTCAAACCTTAAAAATGGGGTTTGTTTCACAGGCGAAATCAATCACTTTCTAACCAATACAGAATAAATTTTACTATGTACAGTTTGGCAGTGTGACCCGCAGAGCGTTCAACTTTAAAGCCAGGCACCTAATGAAAGGTAACCACAGCTCAAGACCGTTGCACAAAACTAATTGTTAACGAGGTGTTGTAATGACCCACAAACAGACCTGACATACGGAACACACTGGGGCGCCATGTGCGTTCCAC ++ +CCCCCGGGGDGGG9FEGGGGGFGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGFGGGGGGGGCFGGGGGGGGGGGGGGFGGFFGGD@FGGGGGGDEGGGGGGGGGGGGGGGGGGCFGGGFDEECFBFFFGGDDFGGFGGGGGG+:DE6FFGFF:@8CC*AGG9F5789:,B:F@::CGE5*4=/A?54+=BF@**2/88*5A48.)*))(0*1;9((//).5:).,3(4:(((0/9FC)-3:((-) +@M02542:108:000000000-AJUMM:1:1101:12495:1216 1:N:0:4 +AAGGCGCGGATGAAGAACGCAGTAAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGCCCTGCCTTTGGCGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACACTCGCATCGGGCGCGCGGCGCGTCCACAGCCGGTACACACCCAACCTCTGA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEEGFGGGGGGGGGGGDGGGGEGGGEGGGGGGGGGCEGCFG6EDCGG>E5CEGGEGGGEFGGCCFGGGGGFGGGGGGGGGGGGGGGGG777FGGGGGGGGEGG7FFGCFFFGFFFGDEFFB>)8>;>7D377(49>)9?41:>(492DCCGGGFF:FD3F7CA+@D7C*:5)91**21;36=CF77,42;6*8)((,2.2).3.9DBGF6<23))-, +@M02542:108:000000000-AJUMM:1:1101:10416:1218 1:N:0:4 +AAGCCTTGGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGAAATTCTCAACCTATAAGCCTTTGCGGGATTTGTAGGATTGGACTTGGAGGTTTGTCGGCTTGCGTCGGCTCCTCTCAAATGCATTAGCTTGATTCCTTGCGGATCGGCTCTCGGTGTGATAGTTTTTTGCGCCGCGACCGTGAAGTGTTTGGCGAGCTTGTAACTGTCTC ++ +CCCCCGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGFGGGGFGGGGGGGGGGGFFFGFGCEGEGGGGGGGEFFFGGGGGFGG>@FECAFFFGGGDFGDDGGGGGGFDEGGGEG6@C8DCCFEEGGGDFEGG6,>>79ECBFFFGFGGGG>FD==DGCFGGCEDE<5>=?=>GDEFGFG+C:@CF3)7<5=,7<<>>=<@A<<7()-(4))9)2-).--:2-) +@M02542:108:000000000-AJUMM:1:1101:14224:1218 1:N:0:4 +GACTCTGATGAAGAACGTAGTAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTCTGGTATTCCGGAGAGCACGCCCGTTTGAGTGTCATGGTATTCTCAACCTCTAGTAACTTTTTTGTTACTAAAGGCTTGGACTTGGAGGGTGTGCTGGCTTTCTTGCTAAGTCGGCTCCTCTTAAATGCATTAGCGTACATGTTCGCTCGCTATCAGTGTGATAATTATTTGCGCTGTTAGTTAGATTGAAGTTACAAGTGTTGCGCTTT ++ +CCCCCGC9CECCEGGGGCFGF,;E@ECFF7,88C<@,FEGFFGGGGFCCEGFGGG8,3D,E;7EFG,8,34@55CCCCCAFGCFF,<@?FFC>C5*22=FFE)4/5?9;CC:+;:@C>:+8+1+;+;8?D::)27B( +@M02542:108:000000000-AJUMM:1:1101:20691:1218 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAGGTCAACACTTAGAAAGTACTCCGAAGAGTAGTGGTTAAAGACCGCCGCCCGCAGATTCACGCCGTGTACATGCTTGGTTAAAAGCTCCTCGTACCGGTTCCATCTGGGACGCCGTCACTATCTTTGAGGCCCATAACTGTTATGTTATGAAAGTCCAACACCAAGCCGGGGCTTGAGGGGTGATAATGACGCTCGAACAGGCATGCCCTTCGGAATACCAAAGGGCGCAATGTTCGTTCAAAGATTCG ++ +CCCCCGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGDCFGGGGGGGGGGGGGFGFGGGGGGGGGGGGGGGCFEGEFEFFCGF9CFGGGGGGGGDGGEGG5DGFGGGGEFGGFFG7DEGDBDDFGDFFGFF??FGFFFFFDFG7442)8FFFFBFB>2,-)1CGFFF4)-,3.6( +@M02542:108:000000000-AJUMM:1:1101:15299:1219 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATGTCATAAAGTTGTCCACAAGGGACGATTATAAGCAAGAACACTGATATACTTCACGAACACGGCGTAGACAATTATCACACCGAAGAGCGATCCGTAAGATTCACGCTAATATATTTCAGAGGAGTCGACTTGGTAACAAGCCGACACTAACCTCCAAGTCCAAGCCCACCAAATCAACAAAGATTTGAGGGTTGAGAATTCCATGAAACTCAAACAGGCATGCTCCTCGGACTACCAACG ++ +CCCCCD:FG;FGFFGGGGFGGGFGGGGGGGGGGDFGGFGGGGGGGGFEFFDDGFFGGGGGGGGFGGFGGFGGGDFGGFFFGDGFGGCFGGGFGFG3>CCBFFDGFFGGGGGGGGGGD=9EBFCGFGGGEG7>CDFCGGGCFF>EG5BF???>;CCFCCE7EFF4=FFGCEG5*+;FGD?F**)02+;:9DD*CC6)3=?F?6C(4(54::(- +@M02542:108:000000000-AJUMM:1:1101:10246:1219 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATTGTCAAAAAATTGTCCTTGCGGACTGTTAGAAGCTCGAACACTGCTATACTTCAACACCACGGCGTAGACAATTATCACACCGAAGCGATCCGTAAGGTTCGCAACTAATACATTTCAGAGGAGTCGACTGTTGCCAGCCAACACGGCCTCCAAGTCCAAGCCTTCTTCACAAAAGTGTTGAAGGTTGAGAATTCCATGACACTCAAACAGGCATGCTCCTCGGAATACCAAGGAGCGCA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGDFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGFGGGGGGGGGGGGFGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGDGGGEGGGGFDEG,EFGGGGEC@FGDGGGEGGFCFFGDCGGGCGFGCGGGGGCGGFGCCCG7FG@FGGGGGCFGFC78DFGDCC*==ECGGC?C:FGGDFG6;9CCGFC76;87?CFCC7FFCFFFGF*CF>7@?9??C6)5F46?F?<06>)7)*).,(-,(4?FGC6C::73(43; +@M02542:108:000000000-AJUMM:1:1101:17408:1220 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAGGTCAAACTGTGGGGGTGGTCTTGATGGATGCTGATGTCTCGGTAGTCTCAGGAAGCGCAAACTGCTGCGCAAAGAGCCGATACAATCGCTGCCAATACCTTTAGGACGAGTCCATACTATGAGCAGGACAGCATCCAACACCAAGCAGGGCTTGAGGGTGTAAATGACGCTCGAACAGGCATGCCCCATGGAATACCAAGGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTAAATTCTGCAAT ++ +CCCCCGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGFGG@>FGGGGGGGGGGGGGFFEB=CGFGGGGGGEGEGFGGGGGGGCDEGFGDFGFFFC6*A==?4@CCFFCCGGDFC@>9DBD>@4/7CBEFFB2=@F<AFGFF??FF=FF?DA9A>2)6:) +@M02542:108:000000000-AJUMM:1:1101:16782:1220 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCTCACCCGATTTGAGGTCAAGGTTTATAAAACTCTGTCTTAGATGCAAGACTGTTTGAAGCGGGGTCTGAAGCGACAGTGCGAAACCCAAGACGTAGAAACATCTTATCACGTCAAGGATCGGCAAAGCAGACCCCACTAATCCATTTAGGAGGAGCTGGCTTCAAGGGAGGCCAGCAATGAAAAACCCCCAAAGTCCAAGCCTTCCCCGGTCAAGAAACCAAGAAAGGTTGAAGGATGTTAACGACACTCAAACGGGTGTGC ++ +CCCCCGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFGGGGGGGGGGGGGGGGGGDGGGGGGGFGGDEGGDGGGGGGGGGGGGGFGGGGGGGGGGGGGFCFGGGGFGGGGGFDCGGGGGGGGGG7B>FG7CGGCFGGGGCGCFCCEG78EFFGEGGFGFGDCFGGGGGGGCFFGGGCCCDEGGGCEGFFFGGGFFGFGFGG4BDDG3=FGFFBFFD>F<4;4F+(5)6:8*3/6)-6282(4)97FF)(4:63,(. +@M02542:108:000000000-AJUMM:1:1101:13161:1220 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATGTCATATAAGTAAAAACTAGCTGTCCAACTGAAGGACGGTTAGAAGCGCAAGCTTCTGTCACTTCACGACTACGGCGCAGATAATTATCACACCGAAGCGATCCGTTACACTCACGCTAATGCATTTAAGAGGAGCTGACTATGCGAGTAGCCAGCACAACCTCCAAGTCCAAGCCTCCGATAACAAAAAAGCTATGAAGGTTGAGAATACCATGACACCAAAACAGGCATGCACCCCGG ++ +C,DE586DFGGFC9EE8CEFGGF:F8FF68:;?4=?FFF91<+C3CCF==/>);D=4DF<5C776@>=@49*()/9@7>BF2*9*34,((.42<:0)5/90)).2(499 +@M02542:108:000000000-AJUMM:1:1101:14664:1220 1:N:0:4 +AAGACAGAGATGAAGAACGCAGCAAAATGCGATAAGTAATGCGAATTGCAGAATTCCAGTGAGTCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCTGAAGGGCATGCCTGTTCGAGCGTCATTATCACCCTTCGAGCCCCTGGGCTTGGTGTTGGACGGCTTTGCCAGTCGAGAGACTGCCCCCTCCTGAAGCCAATGACGGCGGCCTCGTGGGAGCCCACGTACACTGATCTTCTTAACCTAGCACGTATCGGACCAAGCGTGCACGGGACCTGGTCTTCCTCCTTAACCGG ++ +-AA@CCF21;,4*:**3:=*8C*//5*97E1**2*:C929*3+32*1*:@47*09*:FF)4*89))()0*)*--(()*)(0401((4.6)9****(.4)6)-,, +@M02542:108:000000000-AJUMM:1:1101:13911:1221 1:N:0:4 +AAGGCCATGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAACCATCGAATCTTTGAACGCACATTGCGCCCGGCAGTAATCTGCCGGGCATGCCTGTCCGAGCGTCATTTCTGCCCTCGAGCCTGTCCAGCATCTAGGTGCTGTTCCGGCCCGGCGTTGGGGCACTACGGGAAGCCTCGTGCTATCCCCCGTAGGCCCCGAAATGAAGTGGCGGTCCTGCCGCGGCTCCCCCTGCGTAGTATTACAGCTCGCTTCGGGACCCGGTGGAGGCTTGCCGTC ++ +CCCCCGGFFGGGFGGGFGGGFFGGGGGGGGGCCFGFGFDEDDFFFGG<@FFGGGGGGGGGGGGGGGGGGGGEGFAFFGGGGFFFFEGGGGGDFGEGGDCEGG,:,CCEDFGGGGFFGGGC7=CEGE@CGEFGGGGCGGGEE:C>E=CAEEBCGG?7?EDCEEG=5=6CCC=ED=D7C9<3*.53>)*9*)/@C66>??>>55(7096,49096D3C><((,1((-1 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDFGGGGGGGGGGGGGDGGGGFFGGG9FGGEGGGGGGGGGGEGGGGFFGGGGGGGGGGGGGGFFFEGDGGCGEGGGGGGGGGGFFGEEFGFFD@@55EB:)54094@?FF13(2:B>FGFFGG?@FGGFD6FGGCD?G7=CAFFFFFDGCFCDFF65?FFF>B**9+.604)0EEGFF@AADBC;B;@FA;;AEF@?@8EFFBF6CFFBFFFBF14:1:DFFFD0:::?:68FDCBC2<)559AF2 +@M02542:108:000000000-AJUMM:1:1101:17366:1223 1:N:0:4 +AAGAATGTGATGAAGAACGCAGTGAAATGCGATAAGTAATATGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGCGTCATTTCTCTCTCAAATCTTCGGATTTGGTTTTGAGTGATACTCTTAGTCAGACTAAGCGTTTGCTTGAAATGTATTGGCATGAGTGGTACTAGATAGTGCTGAACTGTTTTCAATGTATTAGGTTTATCCAACTCATTTACCAGTAAAGTATTTGTTTATTACACAGGCTCGGCC ++ +CCCCCGGGGFGGGGGGGGGGEGGGGGGGFGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFEF@FFFGGGGGGFFGGGGE@FFGECGGGGGFGGFGFGGDGAAFDGGGGGGGGGGGGGGFGEGEGGGGGGGGGGDGDCEFFGGDFGGGGGGGFGGECFGGGGGGGGGGGGGFGFDFFFFG:CEEEFA,E8DFFFFCEFFGGCGGFF@EGGGFFCGF@FFGGFGGG@8?FG+=5AA7AC4+18*=6>=@::=*:594C=3?CBEGG@DGGGGGGGGGGG8FEC7FFFGGGGGFFFG+@+@77BE@CG6DE:9>>C8BFFGGFFGC6ECFCGECCCDDGFF?C8DF39CGEFAF4@?G*:CDG**8-@4:66)794CGGGFFFFGGGFFGFFGGGGCF?CFFGGG@CFFGGCCFGC997C99@FFCDCDDGFA6:468;4>8CF6FCFFFFF65CEEEC@361@FGGFFEFE?CF3 +@M02542:108:000000000-AJUMM:1:1101:22901:1224 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATTTCAAAGTCGAGCTTTGTTGACCGCCACCCCACGGGCAGGTCTAGGGAGGACTCGATAAGTGGAGAACGTCTCTCGGAGGAGCGAGGATGGTACAACGCCCAGTCGAGTTCGACCCACAGGTCCAACCGAAGCATTTGAGGGGAGCCACCTCAAGGCAGCATGCCCCCACATCCAACCGGCAGCCCGCACGAAACGGGCGAGGTTGATTACTTCAAGACACGCAAACAGGCAAGCACCTCG ++ +CCCCCCFDGGGD@CCFFGAFGGG9CBFFFGFGFCC:CGFCF>FFDCFGGGG*>:8:CFG:CEEB7*:**?,>9>FC6=88*=8E:F32:>@6C>EG8CGGG*:7D:*2C*+))..*/9)*8:<3(((-2)**7*(-((.(((- 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+AACGCGTTGATGAAGAACGTAGCGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACAATAGTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGAAAAGTATTGGCAAGGGAAGTAATTCTTGTGAAAGCTGTTTATTCAATGTATTAGGTTTATCCAACTCGTTGATTGATAGTGGGAAGAAGTGATTGCTATTAGGCTCG ++ +CCCCCGGGGGGGGGGDGGGGGGGGGGGGGGGGGGEGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGFEGGGGGGGGGFGGFGGGGGGGGGGGGGGFGGGGGGGGFGFGGGGGGGGFFFGGGGGGCGGGG9AFGGFGGGGGGGGGF?FFGFGGGGGFFGGGCEGGGFDEFGFGG3:>EGGGGFF?8@>DE,,@@9FCDF6CDFGGGFFDGFCFFGGFCFGGGGFGGGGD,5<,29=+1=8DG82=DCF5AF:6FDA>FFG*7??FF40)53(/3?3)5AFFF7?E<))/)(, +@M02542:108:000000000-AJUMM:1:1101:10934:1225 1:N:0:4 +AACCAACTGATGAAGAACGCAGTAAAATGCGATAAGTAATGTGAATTGCAGAATTTAATGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTCGGTATTCCGAAGGGCATGTCTGTCTGAGCGTCTTTTAACTCTCAAACCCTACCCTTTGGGGGGTAGGTCTTGCCCTCGCGGCTTGACTAGGTTTGGTTCGTGAGCTCTTGTCGGCTTTGTTTTGGTGTGCTTTAAAGTTTTTTTAGGTGTTCTAGAATTGGTGACCTTTACTAGCTCACATTGAACCTGGCTCGATAGTAAATTAT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGEFGGGGGGCFFGGGCFACEFGEFGGGGGGFFGGG9,A,,83AE8,,3@,,,,8@,@B8BFG,,,D,,,3,,7@;=,:CF8B?CC;C;CGGGGGEG5:EGGGGFGGDFFD2AD5EC*7AEGF6CCGF5@*>>:DCDGC4:.7?F)/))3)9C)<3:22))94/6>D,EC<,+6>B,;EDAG7,,@C?EF9D+@*8*B5>=*7:CE5****++=87*2CFGGDGGF3ACC=778*9707F**)97=4:96)*1:?534((9@4)92.).)6-))0**0*.41:4042 +@M02542:108:000000000-AJUMM:1:1101:14153:1226 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAATTGTCAAAGTGTATGCGCATCTAAAGAGACACAGCAGATTAGAAGCCGGCAGGCACAGGCACCGAGGCGGTCACAACGGCGATGAAGTTAGACTATCACACCGTGAACCGTCGGGCAACTAACGTGACCGAGCTAATGCATTCAAGGAGAGCCGAACCCCACAATGCAGGGTACCAGCAAGCTCCCAAATCCAAGCCACGTCTGATTCAAAACCAAACGGGATTGAGAATTACATGACACTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGFGCFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCEGGGGGGGGGGGGGG9CF5EEGC8E5CGEGGGGGGGGGCFCFFFGF?*:DFGFCFFCFFFG*2>DCGFFFFF7FF2=@GBGFF:?FFF?>?F00:?21>6>DFF?9AAFA0614>@CD)*6)79>?8:0 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+CCCCCGCFGFGC9C@FGGGGGFCAGGDEFDEDFFFGGGF@FFAFFAFGGGGGFGGGGFACEFGGGG8@EDGFFEFEEGGFDEFDCAFFECCFC?FFCFCEF?EFGFFFFG9BC@BC<8FFA>E75@,,@@,@9>F,3,,,,,66AFA::,@,@*AG****1,3=,5*,2=**=;)**)2)**)*0*.)(0)+02)0.80*628;+*86*.3(2(((4()2***(().(. +@M02542:108:000000000-AJUMM:1:1101:13428:1229 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCCGCCTGATTTCAGATCAAATTTAAGAAAGATTGTTTAAAGGCCCCAGCACAGTTTATTTTGTCAAAACTTTCCTTTATATTAAAAAAAAGTTCAGGCAGTCTAAACAAGATCAGGCCTAATGTAATTAAAGAGCACGGTCGTGAAACTGTGACTCCAAGTTCCATTCAAAAAAAGATTTGAATGTGGGGTGTTTTTGATACTGAAACAGGCGTACTCATTGGAATACCAATGAGTGCAAGATGCGTTCAAAGACTCGATG ++ +CCCCCGGGGGGGGGGGFGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFEFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGFGGGGGGGGGGGGGGGFFFFFF;*6=A7@???2<474BA2?FFB +@M02542:108:000000000-AJUMM:1:1101:15815:1230 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACTTAATAATAATAATAATAGGTTTAAGTTGGCTAGAAAACCCGCCAGATGTCCCCTGAGCGAGATTGGTTACTGCGCTCGGGTTTCCGACTGGGCCCGCCATTGATCTTAAGGGCCTACAGGGTACAGTAGGAAATCCTACCGCCTATAGAAGAGCCCCAACGCCCGACACTAAAGTGCCAGAGTGGTGAATTGACGCTCGAACAGGAATGCCCGCTAGAATACTAGAGGGCGCAATGTGCGT ++ +CCCCC<@FCFGGFGGGGGGGFEGGGGGGGG@EEG=:*:CE<:EGDGG*+:AFD7@EDC;;<:>9F*:7CFGDB?BBC5>BF)96+).4<>))392:AFF<)).:7*))--436<2(- +@M02542:108:000000000-AJUMM:1:1101:14204:1230 1:N:0:4 +AACTTGCAGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATCTTGCGCTCCGTGGTATTCCGCGGAGCATGCCTGTTTGAGTGTCACGTAACCATCGCCCCTCAGATTGTTAATGCGGTCTGTCGAGGTGGACTTGGACTGTGCCGTAGTCGGCTCGTCTTGAAATATATTAGCTTGCGCTTTTAGAGTGCCGGGCACCGGTGTGATAATTATCTGCGCCACAGCCTTTGGAACTCTTCCGTGGTGCTGCTTATCGTCT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGFEGGFGGGGGGGGGGGCGGGFFFGG=EFGGGGGGGGGGGDC>*7E)).2F*)4FAFB)().(->FGFFBF))-(,(( 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGEEGGGGGGDCFEGGGFCDFGGGFGGGGFFGGGGGGGGFGFGGFGGGGGGGGGGGGGEGGGGFGGGGFFGGGGGGGGGGGGGGFF>CFCCD595E6F6FGGFGG?FG@FG>DFC77@7<6=FFF?FFF>*(36?<@/5???FB9(4>F9(2- +@M02542:108:000000000-AJUMM:1:1101:17090:1233 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAAACTTTATGAATATTGTTAGGCCGAGCTTACATGCTAGACAACACTGCCTTCCACTATAACGAGTTGGTAGAACCTAATACATTATCGAGGACGACGGCTGTTTAACACACCCTTGCCAAAACCGTATTTCAAGTTAACACAAGTAGAGTATCACTCAATACCAAACACAAGGTTTGAGAGAGAAATGACGCTCAAACAGGCATACCCTCCGGAATACCAGAGGGTGCAAGGTGCGTTCAA ++ +CCCCCGGGGGGGGGGGFGGGGGGGGGFGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGDFEGGGGGFGGCFGGGGGFGGGGGGGGFGFFGGGGGGGGGGGGGGGG:314- +@M02542:108:000000000-AJUMM:1:1101:13480:1234 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAGGTCAACCTTAGAGGTGTCCGCTGGGGACGGCTTTGACGGCAGAGGCCCGCCGGGCTCCCGGGGCGGAGAGTGCTACTGCGCTCGGGGTGCCGGCGTGCTCGCCACTGGAATTCGGGGCCTGCGTTCGGCCGCAGGGCCCCAACGCCAGGCCCGAGAGGGCCTGAGGGTTGAAATGACGCTCGGACAGGCATGCCCGCCAGGGTGCTGGCGGGCGCAATGTGCGTTCAAAGATTCGACGATTCGCCGA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7FGFEFFFEFGGGGGDG7<CEEE?EEGGEGG>EGGGG=EGFEGG:?:EEGG88C6EFGE65?7CFCCFG3CEEDCDCFGGF?D9).CCC75*/7584=DFFFF;D:/403:6673)37<<>?<)6)7*0)1:)((((( +@M02542:108:000000000-AJUMM:1:1101:22875:1235 1:N:0:4 +AACTTGCAGATGAAGAACGCAGCAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTATACCACTCAAGCTTAGCTTGGTATTGGGGCCCGCCCACCAGCGGCCTCTAAAATCAGTGGCGGTGCCGGTCGGCTCTAAGCGTAGTAATACTCCTCGCTATAGGGTCCGGTCGGTTGCTTGCCAACAACCCCAAATTTTATCAGGTTGACCTCGGATCAGGTAGGGATAC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGFGGGGGGGGGGGGECGGGCEFGGGGG=EGCFECCCCFGGGD9C7>*>7;FFF)6<6?(.,. +@M02542:108:000000000-AJUMM:1:1101:21700:1235 1:N:0:4 +AAGACACCGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGAAACTCTCAACCTTCAACTTTTTTATTAAGGCTGAAGGCTTGGACTTGAGCGCTGCTGGTTTTCACTAACCGGCTCGCTTGAAATGAATTAGCAGATCCTTTTTGTAATCGGTTCCACTCGACGTGATAAGTATTTCGCCGAGGACATACGAAAGTATGGCCGAGATA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEEGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGEFGGDA,EEGGGGGGCCG>FFFFFD@DE7FGEGDGDFFGGFGGGGGGGGGDGGGGGGGCGGCC25B7CFGDFGFF=F>F7DCCBDBD)95)1)59.73;9>B?)8>5)09(,8)3<4: +@M02542:108:000000000-AJUMM:1:1101:14218:1236 1:N:0:4 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGFGGGGGFGGGFGGEEFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGEG8FGGCFGGGGEECCDDCGGGGGGEGCFEGGGGGFCFGGDGGFGGGGGGGGGGG:FFCECEGGGG7EFGGEC*;C58*:FGGGF>F2:@*88EFD?GGGGGGGGFGD5:CEGGG?FGEFGECDEGGEDGGGGFGGGGFFGGGGFF*<@GGGGGFGBD<>BGF4)66C4CD<7?F7:?>:4:B<29::BDC45(-80?060( +@M02542:108:000000000-AJUMM:1:1101:22785:1238 1:N:0:4 +AGTGGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGCCCTCCCTTAGCGGGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACACTTGCATCGGGAGCGTGGCGCGTCCACAGCCGTTAAACATCCAACTTCTGATATG ++ 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGGGGGGGFGGGGEFGFGGFFGGGGGGGGGGGDGGGFGFGGGGGGGFGGGGGGGGGGGGGFGGGGGFGGGGGFCECGGGD>GGGCFGGGGGCG7@CCCCFD>9CEFGGGGGGGGGGGEGGFFFFFCDGGEFEFFFA7C+1;=F0>>95>FBF<:32A24>44>C7:<:A:5BFFF04;4@DF9A?2>??<15/CF7:(8?8AD?< +@M02542:108:000000000-AJUMM:1:1101:17517:1239 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTGCCTGATCTGAGGTCTAAGACACAGATTGGTGACAAATGTCATCAAGAGTTAGAAGCAGCAATTGCATCAGCTGAGGCCCTTCAATGAAGAAGATCCCTGATGATAAGTCTATCACATCAGGTCAAGCCACCAAGCTAAGCGGTGCCACTGATTTATTTAGGGTGAGCTGATGACACTAGGCCTCCAGCAGGCACCCATGATCCACGCCTTCCTAGATCTGACTAGCAAACCATAGGAGGTTGAGAATTTCATGACACTC ++ +CCCCCEEGE@F,7EFDDDAGGG6EGCEFGC7,,5DEFGGGGGFFGGGGGEEG5@DG?:C:=8D/5@>DGGG=+834+B=FFFFCAGFE@(.;FEF<@;<;(48DFGGFGFFEEEFFGFGGGFDFFCF42A5DACEF8;;AFEF<@@@@<;;@FDCDGF6?2:62:- +@M02542:108:000000000-AJUMM:1:1101:8971:1239 1:N:0:4 +AACCGCGTGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCCTGGTATTCCGGGGAGCATGCCTGTTTGAGTGTCATGGTATTCTCAACCTTCATAGCTTTTTTGTTATCGGAGGCTTGGACTTGGAGGTTGTGCTGGCTACTCGCATAGTCAGCTCCTCTTAAATGCATTAGCGTGAGTGTAACGGATCGCTTCGGTGTGATAATTATCTGCGCCGTAGTCGTGAAGTGACAGAAGCTTGCGCTTCT ++ +CCCCCGGGGGGGGGGGGGGGGFGGGGGGGGGGFEGG@FGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGFFGGGFGGGGGGCFCFAFGGGGGGGGFGFCFGGGDGGGGDFEFFGGGFFGFFFGGGGGFGGGGGGGGGFDGF8EFEFG>ADCFGGFGGGGFECCGGGGGGGGCFGCDEGCFGF:CDE55*9=F753D*:633>E63?<*)7(7(5-)6<>D7FG07*,(09(,(. +@M02542:108:000000000-AJUMM:1:1101:9130:1240 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAAACTTGTTTGTTGTTTTGTAAGGCAAAGCCAAATATACCAAAAATTCACTAATAAGAATTCTCAAAGAGTTGGATAACCCTAATACATTTAAAATGTTCCTAAAAGCACTATTCAGTACGACTCATGCCGATACTTTTCAAGCAAACGCCTATTTCGACTAAGAGTAGCACTCAATACCAAACCCCAAGGTTTGAGATATAAATGCAGCACAAACAAGCAAGCCCTTCGAAATACACAGGGGCG ++ 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGDFGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGEFGGGFGFGGGGGGGGC@FCFFFFGGGGGEGGGGGGGGGGFFGGGGDE9FGFGGGGGGAFCFFGGGGGGGGGGGGCEEGFFFGGG?:>FGGGG?F>:EDE@?GGCE5ECDB*C>FCGFFGG7675@F7AFCF+8A=>28?A@@<=2<2529DDF9@8C8DFEGGDC@FCD+B6CFA,,,@BF77::,<@DA:FC,<99C>CGC799*8);/;CD4CFA2:+:6B;F>DF7??)<;6@)+),)/)74?EF7*;*/63))/9C) +@M02542:108:000000000-AJUMM:1:1101:20194:1242 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTGCCTGATCTGAGGTCTAATCTTAAGAATGACTAGATGGGTTTGAAGCTTCTAACTTTTCATGTCTCAGCCACTCTGAAAAAGTGTCCTCAGCGAATAGTCGATTACGCTGAGTCAATCCGATTACGAAATTGAGATGCTAATGTATTACGAGCAAGCTAATTACATAGCAGCGATCAAAATCCAAACACCACAGAAGTTCAACAAGGAACCGGTGGGTTGAAGAGTTCATGACACTCAAACAGGCAAGCTCTCCGGAAT ++ +CCCCCFCEGGGGGGGCCDD=,,7@EFF;6DED+@@E;AAE,>;EGGCFF9EC*A1@CEF,9?22:>FC*97:,9ECC::=+7+?,,,5C+@7FFFG:7FBF9<,5,+@+B=FCF+<,>,,,8,,:,@<:CF**7,7=9;<,**37*>*7CF*=*9)**)*-(40477(/.6?B((-(,*2:)*,(-6).)) +@M02542:108:000000000-AJUMM:1:1101:9858:1243 1:N:0:4 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFDFG9FFGGGGGGGGGGGGGFFGDFGGGFFGGGG7E@EEDFGGGGGGDEE7FFFBC?,C;FGFGGGFFFDCED);CFGF=CGGGDFGG:GG>DGFGG7CFFF444257>5)75:>F:09?6>ABFF73)5160)))-4 +@M02542:108:000000000-AJUMM:1:1101:18103:1247 1:N:0:4 +AAGTTAAGGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAATCTTTGAACGCACATTGCGCCCCCCGGCTTCCCGGGGGCATGCCTGTCCGAGCGTCATTGCCATCCCCTCAAGCTCTGCTTGGCTGGTTGGGTCGACGTCCACCCGTGGCCTTGGGCCGGGGGGGGCCGGGCCCGAAAGGCAGTGGCGGTTCCCGGAGGGTGGGCCCTTGGGGCGGTGATCCAGGGGTTGTCATCTTCCACTGCTCCGTTGGCCATGCTCCGGGGGTCCGC ++ +CCCCCGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGFFEGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGFFFAFGGGG:FGGGGGGGGGGGGGGGGGGGGGGCFGGGGFD5CC)8*0**2*9:B<>@<0*6*1**244),//1))-)4<00(,,0*:6*4(-768?>( +@M02542:108:000000000-AJUMM:1:1101:16102:1248 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTACCTGATTTGAGGTCAAACTTTGGTTTGTTTGTTGTAAGGCCGGGCCTAATAGCAATCACTTCTTCCCACTATCAATCAACGAGTTGGATAAACCTAATACATTGAATAAACAGCTTTCACAAGAATTACTTCCCTTGCCAATACTTTTCAAGCAAACTCAAGCATATAACCCGAGTATCACTCAACACCAAAACTATTGTTTTGAGAGAGAAATGACGCTCAAACAGGCATACCCTGTGGAATACCACAGGGTGCAATG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGG:FGGGGDGGGGGGGGGGGFGGGGGGGGGGEGGGGGCFGGGGGGGGGGGGGGGGFGGGGGGGGGFGGGGGAEGGGDFGGGGGGGGGGGGGGAEGGFGGGGGGGGFGGGGGGGG8DGGGGGGGGGFGFGGCEGDGGGGGFGGGFGGGGGGGGGCEGDCG:+;;C?;74/8F4FFFF=6D:51FFCFF6613;AA@F@@@DEEFFFAD45C::??27:), +@M02542:108:000000000-AJUMM:1:1101:22309:1248 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCCGATTTGAGGCCAAGTTGTCAAGTAAGAGGTTGTCCCGACCGAGGGGACGGTTGTGAGCGCAAGACCCAGGAGGTAAGGCACCCAATGAAGACACTTATCACATTTGGCTAGCGCCGAACCAAGGTCGCACTGAAGCTTTTGAGACGAGCCACCGGTCAGGCAGCAGGCGTCCAAGTCCACCTCCCCAAGCCACAACAAAGTGGAGGGGTGTGAGATTACAATGAGACCCAAACGGGCATACCCTTCGGTATACCA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGFGGDDGFGGGGGGGGGGGGGEFGGGGCGGGCGGGGGFFGCGFEEFGFGGGGCGFDFGEDEEDGGFGEFGGGGGGFG7B@FGGGGGGFGGGEGGF<>FGGCGGGFGEFGGGGGGGFGFDFCF,CEGGFGGGGGGGGGGGGDGEGGEEF7<,CFGGGGFCG:FC84=1C@F:88E8*=:8B8ECFGGG:=>*<9<:7AFFGFCE5CG5AFFFECE5D)9*9*09D:CC)<>AB4*99484*9E)).(8)7(8(,(3118?:F65?F6((82A., +@M02542:108:000000000-AJUMM:1:1101:11409:1248 1:N:0:4 +AAGTCGTTGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCCCACTAGCTTTTGTGAGCTATGCTGGGGCTTGGATGTTGGGAGTTTGCGGGCCTTTACTAGGTCGGCTCTCCTGAAATACATTAGCGGAACCGTTTGCAGTCCCGTCACTAGCGTGATAATTATCTACACTGTGATGACTGCTCTCTGACTAGTTTAGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGEGGGGGGGDGEGFGGGGGGGGGGGDCEFGGGGFC9E9CGGGGGGGGGDGFEGGGGGGGGF6FFFDGGGCDFFFF@FGB?>6@:@CA>BA4FFFFBF2)6<- +@M02542:108:000000000-AJUMM:1:1101:15266:1248 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAATTGTCAAAGTGTATGCGCATCTAAAGAGACACAGCAGATTAGAAGCCGGCAGGCACAGGCACCGAGGCGGTCACAACGGCGATGAAGTTAGACTATCACACCGTGAACCGTCGGGCAACTAACGTGACCGAGCTAATGCATTCAAGGAGAGCCGAACCCCACAATTCAGGGTACCAGCAAGCTCCCAAATCCACGCAACGCCCGACTCAACACCAAACGCGCTTGAGAATTACACGACCATC ++ +CCCCCGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGFGGGGGGGGGGGGFFGGGGGGGGG9FGGEGGGDDFGGGGG9CGEFFFCGGGGD@BCCFEGGGGCFGDG<C5*+0(0>FF*8?F<)))-)-((,-(36)*2:=D)(40((). +@M02542:108:000000000-AJUMM:1:1101:12355:1248 1:N:0:4 +AATAAGACGATGAAGAACGCAGCAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAATATATCAACCTCTTTTCAATTGTGTGAGAGTGTGTGGATGTGGGGGTGTTATTTTGCTGGCCCTTCTCCAAGGTCAGCTCCCCTGAAATGCATTAGCAGAACAATTTTGTTGACCGTTCATTGGTGTGATAGCTATCTACGCTATTAACGTGAAGCAAGTTCAGCTTAT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEFGGGGGGGGGGGGGGG9FFGGGGFFGGGGGGGGGGGGFGGFGGGGGGFGGGAFGGGGGEFFGFFC9FGGGG,@FFGGGGG:F5AFG:EG:?DEGGDFFGGGCCCFFFFGDCF8CEFCFDGGAFGFFGGGGGGGFC0=BCAF3CFDFGCEF1AAEFFFCE?F0?<9@CDF?.)64:4AFA +@M02542:108:000000000-AJUMM:1:1101:16885:1249 1:N:0:4 +AACCGAGGGATGAAGAACGTAGCGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACAATAGTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGAAAAGTATTGGCAAGGGAAGTAATTCTTGTGAAAGCTGTTTATTCAATGTATTAGGTTTATCCAACTCGTTGATTGATAGTGGGAAGAAGTGATTGCTATTAGGCCCG ++ +CCCCC+FGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGFGGGGGGGGGGGGFFGGCFGFGGGGGGGGGGGGGFGGGGGGGGGGGFFFGEGGGGGGGGGF;CBFBFAGC7;C<:==FAFBF?DFBFFFFGG4*:<<>(4). +@M02542:108:000000000-AJUMM:1:1101:16144:1251 1:N:0:4 +AAGGCCATGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCTTGAAGTCATCAACCTCTCCCGTTTCGTGCGGGCTGCCGGTTGGATGTGGGGGCATGCTGCCGTGAGGTGGCTCCCCTCAAATGCTTCGGTTGGACCTGTGGGTCGAATTCGACTGGGCGTTGTACCATCCTCGCTCCTCCGAGAGACGTGCTCCACTTATCGAGTCCTCCCTC ++ +C@CCCGGGGFGFGFFDFGGGGGFGGGFGFCE;6FCEGGGGCFCGGGGGGGFFDEA:CC8*1*6B8EE>FDGGGG,1:CCE5876:96E*8>=7/55*:@57CG3:5C.8C3/CC:?*)3?77@E2B)07*41065<)()(4<:(,.6)/:DF*8:A49?:3( +@M02542:108:000000000-AJUMM:1:1101:19300:1251 1:N:0:4 +AACCGCGTGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCCTGGTATTCCGGGGAGCATGCCTGTTTGAGTGTCATGGTATTCTCAACCTTCATAGCTTTTTTGTTATCGGAGGCTTGGACTTGGAGGTTGTGCTGGCTACTCGCATAGTCAGCTCCTCTTAAATGCATTAGCGTGAGTGTAACGGATCGCTTCGGTGTGATAATTATCTGCGCCGTAGTCGTGAAGTGACAGAAGCTTGCGCTTCT ++ +CCCCCGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGDFFGGGGGGGGGGGGGGGGAGGGGGGGGGGFEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGFFGGFGGFGGGGGGGGGF6CF:EG?@EGGGGGGGGGGGGGDGGGGGGGFD5/*=CBGGFFDGGD<7D7ACFFF?FAF3C@E9??6@5F07?B>>AFFFF +@M02542:108:000000000-AJUMM:1:1101:14965:1251 1:N:0:4 +AATAAGCCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGAATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAACATCCTTCAACCTTTCTTGGTTTCTTGACCGGGGAAGGCTTGGACTTTGGGGGTTTTTGATTGCTGGCCTCCCTTGAAGCCAGCCCCTCCTAATTGGATTAGTGGGGTCTGCTTTGCCGATCCTTGACGTGATAAGATGCTTCTACGTCTTGGGTTCCGCACTGTACCT ++ +ACCCCGEFG7B@@FG@FFFGFCFG7FGGEGGFCFGGAFED,CFGGFGFGDGGGGGDFGGGFGAFFGG8FGGGGFF9E@F<@F@:6CFFCFC+@FGGCFC@F=F<8FE7?FFGFFGGGEGGFGD,;@=FE8,@F=DEE8>8D58F3*@ECGEEE?9ECF7F>BEC:5?AD:?D:C5C??1;97CF?GGFGCCF4*/7:5*):786;AF)*)94*34:<@7)9?9>A2FGBFFF(8?: +@M02542:108:000000000-AJUMM:1:1101:13609:1251 1:N:0:4 +CGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGAATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAACATCCTTCAACCTTTCTTGGTTTCTTGACCGGGGAAGGCTTGGACTTTGGGGGTTTTTCATCGCTGGCCTCCCTTGAAGCCAGCTCCTCCTAAATGGATTAGTGGGGTCTGCTTTGCCGATCCTTGACGTGGTAAGATGTTTCTACGTCTTGGGTTTTGTGCTGTCGCTTCAGACCCCGCTGCACACAGTCTTGTATC ++ +CCCCCGGGGGGGGGFGGGGGGGGFGCE9EFGGGGGGGGGGFGGGGGAFGGGGGGGGGGGGGG@FGGFGGGGGGGGD:FCGGGGGGCEC:EFGGFGGGGGGGGGFGG@DDCFGGGGGGGFGGFFEFFGGGGAEFFGD7:CF+F8>7FCFGCEC,B@F>@FC<3@CD:,DGEED>9?7@,,1,2252:F**19@C9CGFGCEC*8/=D>9?*7**:@FGGC?74>DFF75DG:BDGCGF>>*/=<6*0*/-*1*19A1;BEFF)9:(,-2825>F*50C9A<(423(. +@M02542:108:000000000-AJUMM:1:1101:19964:1252 1:N:0:4 +AAGTTAAGGATGAAGAACGTAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACTCTTTGGTATTCCGAAGAGTACGCCTGTTCGAGTGTCATGAAACTCTCAAATCGAAAGTTTATTCTTTCTGATTTGGATTTGGACTCTGCTGTGCTCACGCATGGCTGGTCTTAAATGCATTAGCTCTTTTGGTCTGAATCGTCTGACTCGGTTTGTACCCGACGTGATAATTATTATCGTTGGGGACGTTCTTTATTGAGCGGCCTGGTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGDGGGGEGGGGGGGGGGGGGGGGGFGGGGGGGGGGEFGGGGF9FGGGGGGGGGFGGGGFGGFGGGGGGG?FGGGGG7**3>(,-1((. +@M02542:108:000000000-AJUMM:1:1101:22994:1252 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTGCCTGATCTGAGGTCAAAGCGTTGATAACGATCACAAAGAGCTTTCGGGCAAGACCTAGTTCACCATAATCCCCGTTCCGTAGCTGGTCGATATGTTACTATCAAGCCAGGTTCAAGGTGGGCTAGTAAAGGTCACCACTTGTAGAAAGCCTAAAAAATTTTAAAGCAAGCCGAAACAAAGCCGACAAGTGCTCACGAACCAAACCTAGTCAAGCCACGAGGGCGAGACCTACCCACCAAAGGGTAGGGCTTGAGAGTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGFGGGGGGGGGGFGGFGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGFCFGGGGGGGGGGGGGFCEFGGGGGGGFGGGGGFFGGFCEFGCFFFGFGGGGGGGGGGGGGGGGFGGGGGGFEGGFGGFGGGGF99E=FFGGGG??FEGGFFCGG7F98:DGCCEGEGGGGGDCD55<48C>7,=@FC5CE57AGFFFFF@;CF=FFFFFD5)0)5<>:,-)))88.761<<1::(,;3C)*(-,)(.)) +@M02542:108:000000000-AJUMM:1:1101:18222:1252 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCCGAGTTGAGGTGTAAAGATCGATAATTTGTCCTGGACAGGACGATTAGAAGCGGACACCATATATAAGACCAAAAGGCGACGATTAAATTTACTTATCACGTCAACCAGTCGGACAGATGATCCAGCTAATGCATTTCGAGCGAGTCGACCATTGGCGGCCGACAGACGCTCAGTTACAAGGCCCAGAGGGAGACATTACAGAAACCAGAGGTCTTGAGATGTTCAAAACAATCAACCGGGCATACTCTCCAGAAC ++ +CCCCCGGGGGGGGGGGGGGGDGGGGCGGFGGGGGGGGGGGGGGFFGGGGGGGGGFGGGCGGFGGGDFGGGGGGGGFDEGFGGGGFGDGCGEFGGGGGGGGGG7D?CGGGGGEFGGEG8FFE8FGGDEGGGFGC,CFFFGGFCFF=DFGGA<@FEGCFGEGGGGGGGFFFFFGGGCFFFCA=9>D@EGED>EEC*8*?9D6CECCEGGGGDFGGG5CGGFF++:EFF=**2:DGGE5**2:7+:?7C*674CC***./296CF:(/?C=E)4<))).,9:?F(4(4(2FFC@=4:<<()(3 +@M02542:108:000000000-AJUMM:1:1101:22509:1253 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCTCACCCGATTTGAGGTCAAGGTTTATAAAACTCTGTCTTAGATGCAAGACTGTTTGAAGCGGGGTCTGAAGCGACAGTGCGAAACCCAAGACGTAGAAACATCTTATCACGTCAAGGCACGGCAAAGCAGACCCCACTAATTCATTTAGGAGGAGCTGGCTTCAAGGGAGGCCAGCAATGAAAAACCCCCAAAGTCCAAGCCTTCCCCGGCCAAGAAACCAAGAAAGGGTGAAGGATGTTCACGATACTCACATGGGTGTCC ++ 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+ACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAACACTACTGGTTATATCGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAATAAAATCCCTAAGCATTTGTTTCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTGGATGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTAATCAACATGATGCTCGTTATGGTTTCCGTTGCTGCCATCCTAAAAAC ++ +CCCCCF@FEGGFFCFGGCDFEGFEEEFGFGGAFCFGGGGGGFEFAD9DA@DEFD=8DFECDG8;3@8EGCE>EEGD6C72;77@@FCGGGEEC7C,?CAFFG@:8+8C*2=;CA4);CA468F++=33=;F)@CFFE(4.,2;4F47=F()6))-)4 +@M02542:108:000000000-AJUMM:1:1101:13361:1256 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTACCTGATTTGAGGTCAAACTTTGGTTTGTTTGTTGTAAGGCCGGGCCTAATAGCAATCACTTCTTCCCACTATCAATCAACGAGTTGGATAAACCTAATACATTGAATAAACAGCTTTCACAAGAATTACTTCCCTTGCCAATACTTTTCAAGCAAACTCAAGCATATAACCCGAGTATCACTCAACACCAAAACTATTGTTTTGAGAGAGAAATGACGCTCAAACAGGCATACCCTGTGGAATACCACAGGGTGCAATT ++ 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+@CCCCGGGGGGGGGGGGGGGGGGGGGGFFGEGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGF@FG@EFGGGGGGGGGGGGFFGGGGGGGGGGGGGGGGGEGGGGCFFGGGGGGGDEGGGGGGGGGADGGGGGGGGGGFGGGGGGGG,FGGGGGGDFGGGGGGGGGGFGGCFGGGGEGGGGGGGF@DFGGGGGGGFGGGCFCGGGFGFFGFGFFC?7:FGGGFGGGFGG?EDGGEE?<:A7:/;DG56FC4?F?57*/*.4/:*A9)-)1=FFFA244?0((( +@M02542:108:000000000-AJUMM:1:1101:9463:1260 1:N:0:4 +AACCACTCGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGAGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTGGGGGATCGGCCCTCCCTCTGCGGGGGCCGTCTCCGAAACACAGTGGCGGTCTCTCCGCAGACTAGCCTGCGCAGTAGTTTGCACACTCGCACCAGGAGCGCGGCGCATCCACAGCGGTTAGAAACCCACGCTGTTGA ++ +8@A-,CC,DC7+C@C*==C*:C*:C>8:*:8:8*:8*:?F**<9C8E*?>88C?5*+?*/**28*/3:*2*2/:8E9+;=AC5*2++*2*375::D593+<+*9*:?FCFFGC37)).).*)0()735*(-4(/))(7((,42(62657*53((,((,.6 +@M02542:108:000000000-AJUMM:1:1101:15943:1260 1:N:0:4 +AAGACAGAGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCGTGTAATTCTCAATCCCGTTTGGTTTTGAATCAGACGTGGCTTGGATTTGGGAGCTTGCTGGTACCCTGCATTGTGGGGTTCGGCTCTCCTTGAATGCATTAGCTCGGTCACGTTAGTTGCCCGACGGTTCACGGTGTGATAGTCTAACTTCATCGCCGTTGTGACCGCGTCGG ++ +CCCCCEFFGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGFFFGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGFGGGGGGGGGGGFGGFGGGGFGGGGGGGGGGGGGGGGGGFGGGGFEEGGGGGGGGGFFGFFGGGGGCFFGGGGGGGGGGDFFGGGGFFGGGGGGGGGFCCGBFGGDGGGGGGGDGGGGGD,:?=DCCFEEGCEGGGEGGGGGGGFFFGGFDGGGGGGGEGGGGGGGDCEGF=FCGGGGDGFEDB=<:52<)*7A)5649;@*/7:>>99((-46 +@M02542:108:000000000-AJUMM:1:1101:12454:1261 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCCACCCGATTTGAGGTCAAGGTTTATAAAACTTTGTCTGAGATGCAAACCTGTATCAAACGGGATCTGAAGCAACAGTGCGAAAGCAAAGACTGTGATACACCGTAACCAGACAAGGATCGGCCAAACAGAACCCCCTAATACATTAAGGAGGAGCGCACTTAGAACTAGCCCACAAATGCAACACCCACTAATTCCAAACCTTCCCCGGTGAACATAACACGAAAGGTAGAAGGCTCTTCCCCACACTCAAACCCATGTGC ++ 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+AACGCGTTGATGAAGAACGTAGTGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACAATAGTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGTAAAGTATTGGCAAGGGAAGTAATTCTTGTGAAAGCTGTTTATTAAATGTATTAGGTTTATCAAACTCGTTGATTGATAGTGGGAAGAAGTGATTGCTATTAGGCCCG ++ +CCCCCGGGGGGGFGEGAFGGCFGGFCFGE@,?5<7F9@1CE5EFCBFGGEEEEGDFC=CFFFC?7DDG=):CEGDDGGEGG6:FFBDCCBCB91(57)27A?BB8?FFFCG8FGGGGGGFGDGGGCFG7,@,@F:A@FGCBA>*@*@7@EGDEGFGFGGC7EG>CFE?EEGGGGG89<9C?F?FGEDF?DD+=795@5C7@@CE@B;FFF**9C7>DFBA?445:691 +@M02542:108:000000000-AJUMM:1:1101:19731:1263 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACTTGATAATAATAATAGGTTTAAGTTGGCTAGAAAACCCGCCAGATGTCCCCTGAGCGAGATGAGTTACTGCGCTCGGGTTTCCGACTGGGCCCGCCATTGATCTTAAGGGCCTACAGGGTACAGTAGGAAATCCTACCGCCTATAGAAGAGCCCCAACGCCCGACACTAAAGTGCCAGAGTGGTGAAATGACGCTCGAACAGGCATGCCCGCTAGAATACTAGCGGGCGCAATGTGCGTTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGFGEE>FFGGGFFGGGGGGGGGGGGGGGGGGGGGDCFGGGGGGGGFGGGDGCGECFFCFCFEGGGGGGCCFGGGB@FC6::006>=72*)56>27;>F:1)<5242<61?: +@M02542:108:000000000-AJUMM:1:1101:16377:1263 1:N:0:4 +AAGCCTTGGATGAAGAACGTAGTAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGAAATTCTCAACCTATAAGCCTTTGCGGGATTTGTAGGATTGGACTTGGAGGTTTGTCGGCTTGCGTCGGCTCCTCTCAAATGCATTAGCTTGATTCCTTGCGGATCGGCTCTCGGTGTGATAGTTTTTTGCGCCTCGACCGTGAAGTGTTTGGCGAGCTTCTAACTGTCTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGFGFCFGGGGGGFGGF9AEGGGGGGGGGGGGGFEECFGGGGGDEGGGGGEGGDGGDGGGGGFCFGFCGGG,>?C,CFGFFCB:,0?DEEGDCD*/=C35*8ADFF+;:F+@;:.*5>6)0955(2283)06DFFDDEGGGG8DFDCEGGGEGGFFCGGGCGGFDB::>5>>>@C4?>BA:8??7AF><<@481852:31, +@M02542:108:000000000-AJUMM:1:1101:16334:1263 1:N:0:4 +AAGCCTTGGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGAAATTCTCAACCTATAAGCCTTTGCGGGATTTGTAGGATTGGACTTGGAGGTTTGTCGGCTTGCGTCGGCTCCTCTCAAATGCATTAGCCTGATTCCTTGCGGATCGGCTCTCGGTGTGATAGTTTTTTGCGCCGCGACCGTGAAGTGTTTGGCGAGCTTCTAACTGTCTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFD@DFGGCGGGGGGGGGCEFGCFGGGGGGGGGGGGCGGGGGGGFGGGGGGGGGGGCFG?CCGCEGGG55C66=F*=>DCGCGCFFFFD:7;7?)7/.:19::3565?4,@,****1,,6>,4,4;C*6***3*2<:+**/*5+2>C@9>EED*2=*=CG+=++0A*18)))0)1*2**2*1)16*/06/**/<64),5/9)0).)))((((.//.*(-(((-(,- +@M02542:108:000000000-AJUMM:1:1101:14630:1264 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATGTCATATAAGTAAAAACTAGCTGTCCAACTGAAGGACGGTTAGAAGCGCAAGCTTCTGTCACTTCACGACTACGGCGCAGATAATTATCACACCGAAGCGATCCGTTACACTCACGCTAATGCATTTAAGAGGAGCTGACTATGCGAGTAGCCAGCACAACCTCCAAGTCCAAGCCTCCGATAACAAAAAAGCTATCAAGGTTGAGAATACCATGACACTCAAACAGGCATCCCCCCCGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGFGGGG@@FGGGGGGGGGGGGGFGGGGFGGGGGGGGGFFFGGGGGGGGFGGGGGGGGGFGGGGGGCFFDGGGDFGFGCFFFGGG@EGCEGGFGGGGGGFADFGEGDGCBFGGFG7CEGGDFFGGGFGFF@:FFEGGGCFDGEGGGGGGFFGGE8FCFGGFGFGFCFGGGGGGFGCFGFGGG54B,B?7/>EGEFGFFCF4)./940*46?79+6<2>BFF:74218:2<0:FFF)*((,(2631 +@M02542:108:000000000-AJUMM:1:1101:20580:1265 1:N:0:4 +ATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGACTTAGTTCATCAGCAAACGCAGAATCAGCGGTATGGCTCTTCTCATATTGGCGCTACTGCAAAGGATATTTCTAATGTCTTCACTGTCGCTGCGTCTGG ++ 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFEFGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGDFGGGGGGFGGGGGGFGFGFGGGDFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDFGGGGGAFFGGGGGGCGGGGGGGGGGGGGGDGGGGGFGCGGGGGGGGGGGGGGGGGFGGFFGGGDGFG68)+);AFEFFCAG3?9?AAFC=<;>784EDGGGGGGGG5DFCFGEGGEEGGGGGGGGGFGFF=FGGGFFFFFFF)0>D>BEGFFB:?F@B>;EF;B>??9;(7C5;57?BF9?EG:7*CEFFCFFFF=FFB@:5?FB))-<4 +@M02542:108:000000000-AJUMM:1:1101:13569:1267 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCCGCCTGATTTCAGATCAAATTTAAGAAATGTATTATTTGGGAGGCCCCCCATACAGAGTTTATTTTGACGAGAGCTTTCTTTTATATTAAAAAAAAGTTCAGGCAGACTAAACAAGTTCAGGCCTTATGATTTTAAAGAGTACAGCCACAGAAGCGACCGTAAAAACTCTCAAGTCCATTCAACAACAAAAAAAGTTGGGAATGTGGGGTGTTTTTGATACTGAAACAGGCGTACTCATTGGAATACCAATGAGTGCACGT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDCEGGGGGEGGGGGGGFGFGGGGGGGGGGGGGDGGGGGGGGGGGGGFGGGGGGGGGGGGFDF>CGGGGG<>)-977=@B*9*)0(16::>F28<<67<4ADAFGD47@;@;EFFCFGEF7ECDEEC8E9DE8C:*8B:*=8BEC88CEGD9B+<+2;FGG?C=+--5>45?0=7:46).),)**9@G;0;10<42 +@M02542:108:000000000-AJUMM:1:1101:15112:1268 1:N:0:4 +AACTCGCTGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATCGCAGAATTTAATGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTCGGTATTCCGAAGGGCATGTCTGTCTGAGCGTCTTTTAACTCTCAAACCATACCCTTTGGGGGGTAGGTCTTGCCCTCGCGGCTTGACTAGGTTTGGTTCGTGAGCACTTGTCGGCTTTGTTTTCGCGTGCTTTAAAATTTTTCTAGGCTTTCTACCAGTGGTGATCTTTATTACCCCATCTTGAACCTGGCTTGTTATTAACCTAT ++ +CCCCCGDGGGGGGGGGGGGGDGGGGGGFGGGGGGGGGGGGFGGGGGGGGGEGGGGGDEGGGFGGGGGACFGGGGGGGGGGGGGGGGCF+FGGGGGGGGGGGGG?7=FCGEGGCFGGGGFDE9FGGGGC7FDA,EFGFGGGGGG,5AE,==EEFE+3=**<:C@CFGFGF@GF7*<*:CE8;:+9C6CGCE5CF?ECC<*C+;@?9AC5E>:8<++2:*0/**119EF7:CE*DCGGGC5>DC@7*47*4/2=,;6++;?*A*1=C*2*=+;+*2:7C)845)/07(7@F5*,(.8?@4()(-(((,(,-)//)/().)-.6)) 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGFGGGGGGFGGGGGD<@@FEGGGGGFFGGDGGGGGG9EFGDGGFGGGGFEGGGGFGGGGGFGGFGGGGGCGGGGGGFGGGEFGGDG?FEGFFGGGGAFF=FFFAFDCF9BFGGGGCC8@=FGGCG?7FGGGGGGGDGGGFFFGCFAFE9;,>@FFGGGCC?CDF66+BFFGDGGFGGFFGC==7C*BF4BACFFDFFGFC33@42@674;6CA;?55);FGFGE?ECE<))( +@M02542:108:000000000-AJUMM:1:1101:12727:1269 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCTTACCCGATTTGAGGTCACATTAATAAAAATTTGTCCTTAGTTATGGACTGTTAGAAGCTGAGCTTGCATCCCTGTCAACAAGCAGCGAAGATAGGTATCATGCTAATAAACAGTGAACCGGTTAATCCGCCAACGCATATCAATGTAGGAGAACCTGAAGTCAGCAAAGAAGGACCCTGCAAAACCCACACTCACCACAACTTCAGGAGTTCGATATCTTACTGAAACTCAAACAGGATGCCGCCACGCAATAGCAAGG ++ +CCCCCGGGGFEGGFGGGGGGGGGGGGGGGFGGGGGGGGG,,E@FF4++,,93@<+8=<+@=+3CEF,,7,@=,,::,,,5@C@67@E,,5>@C,,,,3,**,,,1,=,9:*;@5**46,/4*4,*0+++4*)*22+**+2))++3++)1/;8:.;;)*.=1))(/=((((-<)/7*).)-.2( +@M02542:108:000000000-AJUMM:1:1101:17015:1269 1:N:0:4 +AACGCGTTGATGAAGAACGTAGTGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCAAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACAATAGTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGAAAAGTATTGGCAAGGGAAGTAATTCTTGTGAAAGCTGTTTATTCAATGTATTAGGTTTATCCAACTCGTTGATTGATAGTGGGAAGAATGGATTGCTATTAGGCCTG ++ +@CBCCGGGGGGGGGGFFGGGFGCFCG9CCFG7D;CFEGBDFFF9@FFFG8DFGAF,DCC=:DD663>85,@EFGCGFGGG7?CC2=E7,?B+;@,2=6BB+=?FGC4@7BF);A*/0>F488:5@E5BAF()(/,6))()9AD*:7?CCE3(@)6 +@M02542:108:000000000-AJUMM:1:1101:18640:1269 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGCTCAGAGTTCAGAAATTTGTCCGAAGACGGTTAGAAGCGTGAACACTAGAATACCCTCCGCAGCAACGCAGATAATTATCACGCTGAAGCGGCTGGTAACGTTCGCACTAATCCATTTCAGAGGAGCCGACTACGAGGGCCGGCACGACCTCCAAGTCCAAGCCTTCATCAATAAAGCTGAAGGTTGAGAATTCCATGAGACTCAAACAGGCATGCTCCTCGGAATACCAAGGAGCGCAAGCTGCGTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGFGGGGGGFFGGGGGGGGGGGGGEGGGCGFFFFGGGFGGGFFGEGGGGGGGGGGFGFGGGGGGCGFGGGGDGG9@EGGDGGEGGGDGGGDG@EEEGGGGDGGD8CGEGCFGGFGGGGFGFCFGGF+<7;+CF6)),()076>?BB.<0113>F3BD;6(),((,, +@M02542:108:000000000-AJUMM:1:1101:19807:1269 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAAACTTTATGAATATTGTTAGGCCGAGCTTACATGCTAGACAACACTGCCTTCCACTATAACGAGTTGGTAGAACCTAATACATTATCGAGGACGACGGCTGTTTAACACACCCTTGCCAAAACCGTATTTCAAGTTAACACAAGTAGAGTATCACTCAATACCAAACACAAGGTTTGAGAGAGAAATGACGCTCAGACAGGCATACCCTCCGGAATACCAGAGGGTGCAATGTGCGTTCAA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGC9BFGGFGFGGGGGFC0,:;DGGCEGGGFFGFFGCDGGCGFFBFF??FF:?**18C*:/8CCEF6*/:EG8FGCF=D<<959:7CDDDC49>F)/7=>9;>:507<2((4(,-.(0*1)1)))))-)., +@M02542:108:000000000-AJUMM:1:1101:16878:1270 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACCTTTGAAAATTGAGGGGTTTCACGGCTGGAACTCGCTACACGTCCTGAGCGAAGAGTAAACTACTGCACTCGGTGTGATAGTGAGCCCGCCACTGTTTTTAGGAGGCTGCGGGCAGCCGCAGGGCTCCAACACAAGCCTAGGGCTTGATAGTTGAAATGACGCTCGAACAGGCATGCCCGCCAGAATACTAGCGGGCGCAATGTGCGTTCAAAGATTCGATGACCAACTGAATTCTCCAATT ++ +B9CCCGGGGGGGGFGGGGGGDGFGGGGGGGGD7FGGGGGGGGGGG@FFGCGG@CFE@FFFECGGGF,CFFC,<<7CFEGGGGGGGGGGGGGDFFFGGCFGCEFGGA9FGDEEGB,ED9FFGGFFGGGCE,?@EFGGGGGFF<<:BF@FGG+B<,CEEGGGGGCFGGGFGGFGG:C*CCGGEEFGGGGGC++=B?0*:3*:C6>)6CFGC;<<75CCCCFGGFFC*25C)7>>0:7*//)/.>)/:24269?45:4)))().157C*7<)))--544 +@M02542:108:000000000-AJUMM:1:1101:10058:1270 1:N:0:4 +AACCACTCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATCGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCAATGCTTGGTGTTGGGCCCCGCCGCTCACCCGGCGGGCTCTAAAATCAGTGGCGGTGCCGTCGGGCTCTGAGCGTAGTAATTCTTCTCACTACAGGGTCCCGGTGGATGCTGGCCAACAACCCCCAATTTTCTATGGTTGACCTCGGATCAGGTAGGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGFGFGFGGGGGGGGECCFGGGGGGGGGGGGGGGGGDFFDGGGGGGGFFGGGGGGGGGGGGGGGGCFGGFEGFGGGGGGGGGGGGGGG:EEGEGEGGGG765:;CCBFEGFD61:267B2@9:A9,EDFEFCG,@FC9>EEE@9C:CCGGCEC79,4?C7C,?F7FFCF,**=CEGGGF6E9@+C8)=@6::77C*?68)17))0(059>6<2>26*74*6)55A4)().*:9069AA)5-6( +@M02542:108:000000000-AJUMM:1:1101:8838:1273 1:N:0:4 +AAGGCGCGGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCGCTGCTTGGTGTTGGGCGGTACCGCGCGCGGTACGCCTCAAACGCAGTGGCGGCGCCGTTCGGCTCCTAGCGTAGTAACTACTCTCGCTATGGGGACCGGGCGCGTGCCCGCCAGCAACCCACACTTCTACAGGTTGACCTCGGATCCGGGCGGGAT ++ +CCCCCGGFGGGGDFGFGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGG88CEDECCGDEECGCCGE*?CGGGG8?CCGGG8ECGDGGGGGGGGG:*:;9@FG7F7?D<*:57C7?5BDE*9<))/97:=<:(52))-1759)90(((-(3( +@M02542:108:000000000-AJUMM:1:1101:9685:1273 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAAATAGTCAAAAGTGTCTTTTTCAAGACAGTTGGAAAGCAGATGATCTATATCAGTTCACTGTAACAAGCGTAGATATACTATCACACTCTAGTGAATGAAGCAACCACTAATGCATTTAAAGGGAGTCGGCTTGATAAAGCCAGCAAAACCCCTCACATCCAAAAAGCCTAACCACACAGGTAGGTTTTTGAGAATATTAATGACACTCAAACAGGCATACTCCTCGGAATAACAAAGTAGTCC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGG@FAFGGGGGGGGGGGGGGGGGFGGGGFGGCGGGFFGGGGGGGGGGFFGGGGEDFGGDDFGGGGGGGGGGGGDFGGGGGGFFFGGGECFFFGGGGGGF9EGFEFG<=FGFFGFF?:F?CCE7EGFGGGFGE8,6=88+6>>D=@;E?EF6EDGGGGFCD77FF59>5C57:*,*2==C:CC?F>D54+*14=BCCAD?FEFAG6+)/((:8)6/)7.;32(6()*+;*77(175:)) +@M02542:108:000000000-AJUMM:1:1101:15297:1273 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAATTGTCAAAGTGTATGCGCATCTAAAGAGACACAGCAGATTAGAAGCCGGCAGGCACAGGCACCGAGGCGGTCACAACGGCGATGAAGTTAGACTATCACACCGTGAACCGTCGGGCAACTAACGTGACCGAGCTAATGCATTCAAGGAGAGCCGAACCCCACAATGCAGGGTACCAGCAAGCTCCCAAATCCAAGCCACGACTGATTCAAAACCAAACGGGATTGAGAATTACACGACACTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGGGGGGGGGGGGGDDECCFDFGGGGGGGFGGGGGGGFFGFFGGGCFGEGGGGFBF@FEEGGGD8FFGFGGGGGGG7CEECFCFGGGGFGDFFGGFDGGGGGE5C8CEEC7:4<:4>FC>4>C9497C>F9)7<>?946CFGA?:?353351:>??<)467::7DDF>F934( +@M02542:108:000000000-AJUMM:1:1101:10223:1274 1:N:0:4 +AAGACACCGATGAAGAACGCAGTAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGCCCTCCCTCTGCGGGGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTTCTGA ++ +CCCCCGGGGEFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEFFGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGCCFFFGGCFFGGGEGGGGGGGGG9CFGGGGGG,BEFGGGGGGGG7CFGGGGGGFGGGGEF<=FGGGGFEEGGGGGEGGEEEGGDEGGEFCCG*:8CCEGDGGGCGGG>ECCCEE8:CCC8FCCF?E?EC?5C=*D>FECD=171(.6.,.49B6:2<>B>/7>C<(-454<2 +@M02542:108:000000000-AJUMM:1:1101:14261:1274 1:N:0:4 +AAGGCGCGGATGAAGAACGTAGTGAAATGCGATAACTAGTATGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCCGACCGAGCGTCACACGCACCGCCCGGCGTAGACGGAGACGGCGAGAGCTGTCTGCGTTTTTGCCGGTACTGGGGCTCTTCTCGCGGCCGGGGGTTCCCGCATTGCGCGGATCCCTCTCTGCGGCCCCGAACTGCAAGTGGTGGCGGCCTCCGAACCCTTCGCCCGGCGCAGTAAGAAATTCTCGC ++ +CCCCCCFGGGGGGGGFGGGGGFGGCGGGGFEGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGFFDFGGGGGGGGGGGGGGGGGEGGG7FGGGGGGGGGGGGGEGGGGFGGGGGGGGGGFGGGGDGGGGGGGGGGGDGGGGGGEGCCEGGGE7C:EGGDFGGGG:CEGGGGCGGGGG7FEGGGGCGGGFDEGGG8EC*:EDG5CCCE>0<:C5>EGGCGGDC/)7EFG6C9CFD*57CDB>3)8=CFDF774/4B@35:45)9.::BF1)7??B::>03(3910*26:<(:::A<(( +@M02542:108:000000000-AJUMM:1:1101:15793:1274 1:N:0:4 +AACTCGCTGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCGTGCCTGTTTGAGTGTCATGGTATTCTCAACTCTGCTACATTTTTTGTGTAGCTGGGCTTGGACTTGGAGGTTCATTGCTAGTGTTATCTTTTGAACGCGGGCTCCTATGAAATGCATTAGCTGGAATGTTACCGAGCATGATTCAATGTGATAATTGTCTAAGTTGCTTCAACTTGGTATTAATTGTGTT ++ +CCC@CFGGGEGGDFEEEFGGCCGFAFFGCFE@DFGGGDCGFFGGGGGDFG,ECFECFECFDFGGGFGFGGFCEFGG9@EGGCFGGGGGDFG7FGGGCF,CEGFEG++8BDCFFGD,?F5FAFAEFAF?<<@F3@,3;=5@99+,D,34@8:C5*,,,,,,1=CFB7D,=CF,,8C>6CE+++**))9>7>CF77+)+3++;?+:F+2FE,EFFEFCFFEGGGGGGGGGGGGGGGGGGFGGGGF=:@FFCFFFGGFGGFGEEGGGGGGGGGGGG?=DFG,DFFEGGFGGGGGCFGCGGEDGGCECFGGDD8@?FFFFGFGGFFG7;D?EDFFGGGG5)=CGGGDCFFG554CC7;+;6@BFFGFBAFF>):2?B?FF?2:<>BF?:(8?FFC?5;;?6A?>?: +@M02542:108:000000000-AJUMM:1:1101:21699:1274 1:N:0:4 +AACCAACTGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGTTAATATCAACCCCGACGGTTTTTAACTATTGGGTGTTGGACTTGGAGGATAGTGCTGGCTGCAAAGTCGGCTCCTCTTGAATGCATTAGCTTTGGACCTGTGCGCGTTTGCTAGCGGTGTAATACATTTTATTCACCACGGGCCGTGTCACTATTAGGGTCTGCTTCT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFFFGG9EGGGGGGGGGGGGFFGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGECFGGGGGGGGGGGGFAFCEFGGGFGGGGGGGGGGGGGGFGCFGGGGCCFFGGGGGGGGCEEGGFG7ABDG3DC:CFFFFFCFFBF=:?C??6;3@B>5,:?ABAAFBCFF>BFA?FFFFFFBDF?:6>D3>:FA29;>:6:6 +@M02542:108:000000000-AJUMM:1:1101:21204:1275 1:N:0:4 +AAGCCTTGGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCCCTTTGGCATTCCGAAGGGCATGCCTGTTCGAGCGTCATTACACCCCTCAAACTTCACTGTTTGTAGTTGGGCGATGCCTAAGCGGCACGCCTCAAAATCAGCGACGGTTCCAGCCAACCTCAGACGTGCAAGTATCGTTATGGGCGAAGGTTGTGGCCAGTCTTTGTTAAATCATACCTAACTGTTGACCTCGGATACGGTAGGAATACC ++ +CCCCCGGGGGGGFGGGGGGGGAFGGGGGGGGEGGGGEFGGGGGGGGGDGGGGGGGGGDGGFCFGGGGGGGGGGGGGGGGGGGGGGGGGGGGEFGGGGGGGGGGGGEEGGGFGEFDFFEGGGGGGGGGEGFDFGGGGGGFGGAFCBFGGGGGGAEGFF88FFDG@CCEFFGF7AAE:9>DECEEEGGGGFFGEFGGCFFC,,CFGG==CCCFGG71>5?:FDC:>477FFGC6BBF0=?FBF<<>:?F(73)*/5923(.4:298 +@M02542:108:000000000-AJUMM:1:1101:12686:1275 1:N:0:4 +AAGTTAAGGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCCGTGAGTCATCGAATCTTTGAACGCACATTGCGCCCCCCGGCTTCCCGGGGGGCATGCCTGTCCGAGCGTCATTGCCATCCCCTCAAGCTCCGCTTGGCTGGTTGGGTCGACGTCCACCCGTGGCCTTGGGCCGGGGGGGGACGGGCCCGAAAGGCAGTGGCGGTTCCCGGAGGGTGGTCCCTTGGGGCGGTGATACATGGGTTGTCATCTTCCACCGCCCCGTTGGCTATGCTCCGGGGGTGCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGDEEGCGGGGGGGGGGGGGGGGEFFGCFFGDGGFFGFGGGGGFGGGGGDGGGGGGGGGDEEGDEGGGGEGGGGGGE8EFGGEGGGGGGGG585C:CCE*//:EEECE>FFC*AFGCC*>7CGGDDDGECEDEFD4+<677:C5>))***2***8:F37.9>F=GF7<422)0)(.(-2FFGF6:3:C757=CEGG4)8?FFGGC46>A6255(>AFFC?8(68)).6)13)9)74)97C=F6(3-((() +@M02542:108:000000000-AJUMM:1:1101:15455:1276 1:N:0:4 +AACCGCGTGATGAAGAACGCAGTGAAATGCGAAAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCATGGGGCATGCCTGTTCGAGCGTCATTTGTACCTTCAAGCATTGCTTGGTGTTGGGTGTTTGTCCCCGTCTTTATACGCGGACTCGCCTTAAAGTAATTGGCAGCCGGCGTACTCGCCTCGGAGCGCAGCACATTTTGCGCCCCTTGACTTGAACGATGGTGTTCATTAAGTCTTTACTTTTGCTCTTGACCTCGGAT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGG@EGGGGGGFGGGGGGGFGFFGGGGGGGGGGGGGGGGAFGGGGGGGGDGCCFGDGGGGGGGGGGGCFGGGGGCFGFGGGEGGGGGGGGGG7EDGDFGDFCC7:*)5>5<53.*)*1<)-4-7*1-0.).)62<))/:C**.,5-)3(-- +@M02542:108:000000000-AJUMM:1:1101:14248:1276 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCACATTAATAAAAATTTGTCCAATTTAATGGACTGTTAGAAGCTGAACTTGCTTCACTGTCAACAAGCAGCGTAGATAGTTATCACGCCAATGAACAGTGAACAGGTTGTTCCGCTAATGCATTTCAGGGGAGCTGACCGTGAAGCCAGCAAAGAAGGAACCCCCACATCCAACACTCAACACAAGTTGAGGAGGTTGATATATTAATGACACTCAAACAGGCATGCTACTCGGAATACCAAGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGFGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGFGGGGGGGGGGGGGGGGFGGGGGGFFCFGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGG@EGGGGGGCGFGGGCEEGGGCEG67CGGG*=FFGGGGGCF8+8CFFGGGCFGG8+68;F@A?FFGF6@3(4AFF?A@@@E356/.7>FB< +@M02542:108:000000000-AJUMM:1:1101:14066:1276 1:N:0:4 +AACGCGTTGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTTCAGATTTTCGTGAATCATTGAATCTTTGAACGCACATTGCGCCCTCTGCTATTCCAGAGGGCATGCCTGTTTGAGCGTCATTTCCCTCTCAACCATTTCGGTTTGGTGATGGGCAATACGCTCGTCAGAGAGTTTGCTTGAAAGGAATTGGCATGAGTTTTTGATATGAACTTCAGCTGTTTATCCAATGCATTAGGTTTACCCAGCTCGTTGATCGATAGTGGGAAGGAGTGTTTGCTATTAGCCTCGGCCT ++ +CC9@8@@+@<F>DF+@+@+8++@,36@@,3F9C,8@8,,,>,3@,8,4@,;D3,>=D*C;,,,52>D,=CFDGGFA9,+,55*,*,,411++14+*+****//;1)2*)1)))1)A<),659)()/(())/(-6*:*/*())(,(43- +@M02542:108:000000000-AJUMM:1:1101:14699:1276 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTACCTGATTTGAGGTCAAACTTGTTTGTTGTTTTGTAAGGCAGAGCCATGATACTAAAAATTCACTACCAAGAATTCTCAACGAGTTGGATAAACCTAATACATTGAAATATCCTGAAAGCACTATCTAGTACTACTCATGCCGATACTTTTCAAGCAAACGCCTAGTCTGACTAAGAGTATCACTCAATACCAAACCCGAGGGCTTGAGAGAGAAATGACGCTCAAAAAGGCATGCCCTCTGGAATACCAAAGGGCGAA ++ +CCCCCGGGGGGGGGGFGGGGGGGGGFGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGG@@FGGGGGGGGGGF?EGGFGFFGGGGGGGGGFGEFFGGGFGGGGGGGGGFGEFFFCFCGGGGGGGAEFGGGF8FCE9FFGGGGGGGGFFEDFGGCGGGGCAFGGGFEGGGGGGCEFG>7:CEGFFEFGFD8@FDFGGDGGGGGGGGCFFFGGGFGFDBFGGGGGGG9@6EDF4C99;CAC*)/C<)(.6:*7C120::0(- +@M02542:108:000000000-AJUMM:1:1101:16907:1277 1:N:0:4 +AAGGCGCGGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACCTTCAACACTTTTGTGAAGAAGGCTTGGACTTGGAGGCCGTGTTGGCTGGCAACAGTCGACTCCTCTGAAATGTATTAGTTGCGAACCTTACGGATCGCTTCGGTGTGATAATTGTCTACGCCGTGGTGTTGAAGTATAGCAGTGTTCGAGCTTCTAAC ++ +CCCCCGGGGGGFFGG8@C7BCEGEDF?CEG>BC:BEGFA>CC5CED?FGG9D,,554:CFGGGGGDEGGC=CFFEG3=CE**28)92):*+:2:7**9<=F7>39B74-<<2:26:B4FG)969?9).6) +@M02542:108:000000000-AJUMM:1:1101:14485:1277 1:N:0:4 +AAGTCCGGGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCATTCCGAGGAGCATGCCTGTTCGAGTGTCATGAGTTCATCAACCCCGAAGGGATTCTTGTCCTTCTCGGTGGCTTGGACTTGGGGGACTTTGCTGGCCTTCATCGGTCGGCTCCCCTTGAATGCATTAGCTTGGACTTGTCCCGGCGACGTCATAGCGTGATAACTAGCTGCGCTTTGAACCGTCTGTTGGTGGCTCGTAGGG ++ +-CC@CCFGGCFGFFGGGFECEF=,689FF,DDEGG5>5C;>EGCFGF?C9++++1:CGGFGC6??FGGF7=7C)>7))11/>7>D:5,75:=?4@***+.36(0<*-*2:1,(((.)*11)1.1)7>60,( +@M02542:108:000000000-AJUMM:1:1101:14774:1278 1:N:0:4 +AACCACTCGATGAAGAACGTAGCAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGCCCTCCCTCTGCGGGGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACACTCGCACCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAACTTTCTGA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGG9FGGGGGGGGGGGGFGGGGGCFFGGGGGGGGGGGGCFFGGFGGGGGGGGGGGGGFGFFFBEGGGGGGGGGGDGGGGGGGFGFGGGGGG@FFGGGGGGGGFGGGD@FDCEEGEGGGGG*8CEGFGGGGGGGCCCGGFFEGDDDECG>:8E+8:CECFFFFGGGG5:CE8CE58CE*9EFCFGGG?7C=ECCC+CFG**0*6=F7>7CDG>52DDDD:9>:D>E61-4)9??F<9(416))6>DDF5,(-)..<2 +@M02542:108:000000000-AJUMM:1:1101:16695:1278 1:N:0:4 +AACCGCGTGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTCTGGTATTCCGGAGGGCATGCCTGTTCGAGCGTCATTATACCACTCAAGCTTAGCTTGGTATTGGGGCCCGCCCACCAGCGGCCTCTAAAATCAGTGGCGGTGCCGGTCGGCTCTAAGCGTAGTAATACTCCTCGCTATAGGGTCCGGTCGGTTGCTTGCCAACAACCCCAAATTTTATCAGGTTGACCTCGGATCAGGTAGGGATAC ++ +CCCCCGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGEGGGGGGGGGGGGGGGGGGFGGGCFGGFGGGGGGGG*BFGGEEEGE=EFFFGGGEEGGGGFFFGGGGGGGC:DGGGG6DFGDE<>G)>37FC*>C>@F?FFDE@1>):FGABA>*865=(5<DGFGF),(21(4. +@M02542:108:000000000-AJUMM:1:1101:20403:1278 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGAGTCATAAAGTTATTGTCCGTGAGGACGATTAGAAGCAGACCCTAATAGTGACACGGCCCGTGGTGAATAAAATGTATTACACCGCTAGCAAACGCGCACAGGTCCAAAGCTAATGCATTCAAGCGGAGCCGACTTTGCAGCCAGCACTATCCTCCAAGTCCAACACCCAATAGTTTAAAACCGTCGGGGTTGATATTAACATGACACTCAAACAGGCATGCCCCTCGTACTAGACAAGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGEFEFGGGFGFCFGGFGGGGGGDGGGEGGGGGGGCEFFEFGFGGGGGGCGDGGCF@>FGGFGFFGGGGFGGDGGGCGGG?B@FFFFCGGGC?FGGGGG7CFCF6D:CCGG54;?F@)7)(5)16FF?B:(4??233.=CC?7702>B;)4 +@M02542:108:000000000-AJUMM:1:1101:22500:1279 1:N:0:4 +AAGACGCAGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACCCTCAAATCTTTGTTGATTTGGTGGGCTTGGACTTGGTGGTTAGTGTCGGCTTGTTACCAAGTCGACTCCTCTGAAATATATTAGCGTGAATCTTACGGATCGCTCTTCGGTGTGATAATTGTCTACGCGGTGTTCGTGAAGTATATCAGTGTTCTTGCT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGFDEGGGGFGGGGGGGGGGGGGGGGGFFCDFCGGGGFGGGEGD<,CFGGEEGGCCFGGGGGG+@CGGGDGGGGGGG,@@FFC,CDFGGGGGD>FFGBD@C:,7@>EE5BFFGG7<9:FFF@F7:FCC7?CG<@CG>5::=)5DFF3C:57//9)+98+;A6<=FCAC;(-(.77CFGG6@E59:,,7?FG4***21,+=*;A/1*+0+:?+0/8)*.:;;)20:3((/6AF8A@4=@EE))))2*.*-((((,.)( +@M02542:108:000000000-AJUMM:1:1101:11037:1280 1:N:0:4 +AACTCGCTGATGAAGAACGTAGCGAAATGCGATAAGTAATATGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAGAGGGCATGCCTGTTTGAGCGTCATTTCTCTCTCAAGCCCTCGGGTTTGGTATTGAGTGATACTCTTAGTCAGACTAGGCGTTTGCTTGAAAAGTATCGGCATGAGTAGTACTAGATAGTGCTTTCAGGATATTTCTATGTATTAGGTTTATCCAACTCGTTGAGAATTTTTGGTAGTGAATTTTTAGTATCATGTC ++ +CCCCCGGGGGGGFGGGGGGGFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGEFGGGGGGGGGGGGGGEGGGCGEGFGGGGGGGGGGGDGGGGGGGGGFGFGFGGGFGGGFFGEGGGEEFGGE=EGFGGGFFG7>A:BFFG,EFC,DFGGGGGGFGGF3EFGDDDFFGGGGGGCC;@FFGF,9EG7@CECC5EGFDGFCCCFFF?EE7CE+C@C9E?FF,>CF@FF,=FAD88C:C+BCF8B:*19;AFDFAC3=;)79+163:8)6436.75@FFF9B,>?:@E;>,DEGG7799*=0?E,>5=C*CEGGF:FFB:CC*:+:AF8F+;716:CC+03))())0(08?5)44)66*95599<).)6-5 +@M02542:108:000000000-AJUMM:1:1101:20662:1280 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAAACTTGTTTGTTGTTTTGTAAGGCAAAGCCAAATATACCAAAAATTCACTAATAAGAATTCTCAACGAGTTGGATAAACCTAATACATTGAAAATGTTCCTAAAAGCACTATTCAGTACGACTCATGCCGATACTTTTCAAGCAAACGCCTAGTTCGACTAAGAGTATCACTCAATACCAAACCCGAGGGCTTGAGAGAGAAATGATGCTCAAACAGGCATGCCCTCCGGAATACCAGAGGGCG ++ +CCCCCGGGGGGGGGGGGFGGGGGGGGFGFGGGGGGGGGGGGGGGGGFGGGGCGGGGGGGGGGGGGGGGGGGGGGCFGGGGGFEGFFGGGGGGGGGGGGFGGGGGGGGGGGGDF9EFFGFFFGGGGEGGGDAFGFGGGGGGGGGGGGFDGGF=AEFCFGGGGGGGGGGGGGGGGG=FCEGEEGGGFFGGECEFGEFGGGGDECFGD6EG>EFGFGCECGFGFFGGGGAFGGFGGGGCCGCGGGG585))2C)*27>))6A6FFF.++26C;7@;AA3=F1)5(8?(,2)1*1?3<7((((20 +@M02542:108:000000000-AJUMM:1:1101:14394:1281 1:N:0:4 +AAGGCCATGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCTTGAAGTCATCAACCTCTCCCGTTTCGTGCGGGCTGTCGGTTGGATGTGGGGGCATGCTGCCGTGAGGTGGCTCCCCTCGAATGCTTCGGTTGGACCTGTGGGTCGAACTCGCCTGGGCGTTGTACCGTCCTCGCTCCTCGGAGAGACGTTCACCACTTATCGAGTCCTCCCT ++ +CCCCC@EFEF9C-C8==C83:B**2,6/:@C**=,4**422<+>>=5;8E*+***=)9C5>***0)(8/7))(0795*31>6F))-)2()-,8(..*2<>587)-)((. +@M02542:108:000000000-AJUMM:1:1101:13900:1281 1:N:0:4 +CCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATTTCAAAGTCGAGCTTTGTTGACCGCCACCCCACGGGCAGGTCTAGGGAGGACTCGATAAGTGGAGAACGTCTCTCGGAGGAGCGAGGATGGTACAACGCCCAGTCGAGTTCGACCCACAGGTCCAACCGAAGCATTTGAGGGGAGCCACCTCACGGCAGCATGCCCCCACATCCAACCGGCAGCCCGCACGAAACGGGAGAGGTTGATGATTTCAAGACACTAAAACAGGCATGCACCTCGG ++ +CCCCCGGGGGGGGGGGGGGGGGCFCEF@EGGDGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGFGEGEGGGGGGF?FFDGGGGGGGGCFGGEGGGGGGGAFDFFGGEFGFGGGGGGGGGGGGGGGGGGGFGGFEGGGD?@FGGEGFGGFGGGGGGGGGGGGGE@FGGGGG>FFEEGGGGGGGGCFEGGGGGGGCEC,BE88CCC5@EGC*9755;38@;>B6(7:>?7))64@4@A7(1)(.4<21)CD>C073.((.42 +@M02542:108:000000000-AJUMM:1:1101:8464:1281 1:N:0:4 +AAGGTCTAGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCGTGGCTTTCCACGGGGCACGCCCGTTCGAGTGTCACGTTAACCCTCGCCCACGACGTAGCGATACGCCGGGAAGCGGATTTTGACGTTGCTGGTCGTGAGATCGGCCCCTCTCGCCATGCATTACCTAAGTGCGAAGCACGTACGCCCTTGAACAATGTCTCCGTCTCTCTGACTTTCTCTCTCGCTGCTACTCGCCCCGAGCCACTT ++ +6+@6B,+@F,CECFGF7F@FECFG@C:CA8C?F8BEFDDDGGGGGFD<3@@@+66C:+++5,@:3>3>3;*33*2*:@E**/8+<+<:C9C++02<*?7D<*>F*1**2)*1*10)2*0**0*22**10(8)**0)1*:*+.).)*9*))-((-42),)0))))((,,3((() +@M02542:108:000000000-AJUMM:1:1101:18727:1281 1:N:0:4 +AACTCGCTGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTTAATGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTCGGTATTCCGAAGGGCATGTCTGTCTGAGCGTCTTTTAACTCTCAAACCCTACCCTTTGGGGGGTAGGTCTTGCCCTCGCGGCTTGACTAGGTTTGGTTCGTGAGCACTTGTCGGCTTTGTTTCGGCTTGCTTAAAAATTTTTTAGGCTTTCTATAAGTGGTGACCTTTACTAGCCCACCTTGAACCTGGCTTGATAGTAACATATC ++ +BCCCCGGGCFE@CFFFFGFFGEFEFFGGGC@F9EEG9FGG7@FCA,=FFGGGGDGGGEFCFGGGDFGCCFGDGGCEGG:CFGCCB:((3-<>?>?>32???<:?><*/:.)6)4<9A. +@M02542:108:000000000-AJUMM:1:1101:20454:1281 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGAGTCATAAAGTTATTGTCCGTGAGGACGATTAGAAGCAGACCCTAATAGTGACACGGCCCGTGGTGAATAAAATGTATTACACCGCTAGCAAACGCGCACAGGTCCAAAGCTAATGCATTCAAGAGGAGCCGACTTTGCAGCCAGCACTATCCTCCAAGTCCAACACCCAATAGTTAAAAACCGTCGGGGTTGATATTAACATGACACTCAAACAGGCATGCGCCTCGGAATAGCCAAGGAGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGG:FGGGGGGGGGGGGFGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGG@FGGGGGGGGGGGFGGGGGGGGGGGGGGGFGGGGGGGGGGGGGAEFGGGGGGG?8FEFFFGGFFGCE:::D37D?6)9=CFF89@FFG22>::452/:?((4:??<579?7<>,2:10:( +@M02542:108:000000000-AJUMM:1:1101:8549:1282 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACCTTGGTAAAGTTGGGGGGTTTTACGGCGTGGCCGCGCCGCCTTCCAGCCGCGAGGTTTGTGCTACTACGCGGAGGAGGCAGCGGCGAGGCCGCCACTGCATTTAGGGGACAGGCGCCGAGCAGAGACCGCGCCTGAGCCCCAACGCCGCGCCGCCCGCAGAGGGGGGCCCGAGGGTTGAAATGACGCCCGGCCCGCCATGCCCTCCAGAATACTTGTGCGCGCAATGTTCGTTCAACTATTT ++ +CCCCCFG7FCFGGFGFFFGG9CFGEEFFGGGEDCCCFGGGGFGGGFF9FAFF@@FFGGGGFFDFFEGCFFFFFE7FC3@=BFG+BFCF+@CF7F5CF@FGGFFGGCCFFC:>?E88C;?C?CEGGFD9:@7+8E/?8;CF88CE:EGGDG6**;*:8:CE5**0+0;;A/;*8*/*:CEEGC=CD5*5*79*):ED)7*)5>*9*20<<FCBFFGC?F?,C?A8:FFF<,CFGGFGD,,@C,,@+E>C@9,@E,@D3,,6*4@5C6>FFB,5?C6A<,B148?5C*4//;*>;9*0+=5*++:@=7743C47A*7@F++1/A:*)2))4:)1*(0-3(((54).)**.2,())).)) +@M02542:108:000000000-AJUMM:1:1101:12384:1284 1:N:0:4 +AACTCGCTGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTTAATGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTCGGTATTCCGAAGGGCATGTCTGTCTGAGCGTCTTTTAACTCTCAAACCCTACCCTTTGGGGGGTAGGTCTTGCCCTCGCGGCTTGACTAGGTTTGGTTCGTGAGCACTTGTCGGCTTTGTTTCGGCTTGCTTTAAAATTTTTTTAGGCTTTCTACAAGTGGTGACCTTTACTAGCCCACCTTGAACCTGGCTTGATAGTAACATAT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGEGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGFGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGDGGGGGDGCGGFGG?FFGGFFGGGGGGGFGGGGGG>EGFECFCCECED?GDGGGGFGEFGGGGGFDDC6FCFFGFFFCFFC:76@6=6:BFFFFF@C??1<:BFFFA??:B:?::>D7=C5BE7*)54>>D3CA<(4??4656(-(4.:))*::<*44799(.26 +@M02542:108:000000000-AJUMM:1:1101:22728:1285 1:N:0:4 +AAGGTCTAGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCGTGGCTTTCCACGGGGCACGCCCGTTCGAGTGTCACGTTAACCCTCGCCAACGACGTAGCGATACGCCGGGAAGCGGATTTGGACGTTGCCGGTCGTGAGATCGGCTCGTCTCGAAATGCATTAGCGAAGTGCGAAGCACGCGCGACGTTGATAATTGTCTACGCCTCGCGGACTTTGTTCTCCGCTTCTAATCGGCGCGAGACATTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGFEGGGGGGGGGFGGGGGGGGGGGGGGFFGFGGGGGFGFGGGGGGGGGGGGGEGGGGGGGGGGGGGGGDFGFGGGGGGGGGGGGGGGGFGGFGGGFFGEGGGGG,>BCFFEFGGDEGEEFEEEC*8:*3:8C*;+A85CFGG9C7@EE57:7*0*2077DDF*:?F@BF@DBEB@)179)<576194)-,-,9:>))0*)01,,-023).6 +@M02542:108:000000000-AJUMM:1:1101:22956:1285 1:N:0:4 +AAGGTATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCCGCGAGTCATCGAATCTTTGAACGCACATTGCGCCCGCTGGCTCTCCAGCGGGCATGCCTGTCCGAGCGTCATATCAACCCCTCAGGCGGCGACAGCCTGGCGTTGGGGCGCTGCAGCGTGCGCTACGGCGCCTGCAGGCCCCGAAACTCAGTGGCGGGCCCGGCCCGACCCCGAGCGCAGCAGGAACCGGGGGATAGGGGACGGGTCAGGCCCTGTGCCGACCCCCCCCCAAGACCCCCCTCCC ++ +CCCCCGGGEGGGGGGGGGGGG7FEE@FGGGGG8FEGGGGEEGDEEFCGGGDFGGGGGGGGC@FFFGGGGCFGCC*?>?CE*/:CCF7+:EFG*C8C7EG==5>5)7:3D5E/*2:)5)2*=7CFGG33/))***007(8)))7154;>0:9999()99)9:@EFFGGGG>FFCFFGFG7C6DFGGGC3CCGCEE3CCFGGGGADG:.9CGGFD=*6:B*:F73CFF08710(.3, +@M02542:108:000000000-AJUMM:1:1101:18264:1286 1:N:0:4 +ACGCGTTGATGAAGAACGCAGTGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACAATAGTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGAAAAGTATTGGCAAGGGAAGTAATTCTTGTGAAAGTTGTTTATTCAATGTATTAGGTTTATCCAACTCGTTGATTGATAGTGGGAAGAAGTGATTGCTATTAGGCCCGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGEGGGGGGGGGGGGGGGFGGGGFGGGGGGGGGGGFGGGGGGGGGGGGGCCDFGGGGGGGGGGGGGFFCFGCCAFGGGGGAEFGFFGGGGGGGGGGGGGGFGGFAB@FFFGD6AEFAGFFF)+B6ACC5/1869;?1=@EECEFFC>=FFEFA33(67 +@M02542:108:000000000-AJUMM:1:1101:22236:1287 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCACATTAATAAAAATTTGTCCAATTTAATGGACTGTTAGAAGCTGAACTTGCTTCACTGTCAACAAGCAGCGTAGATAGTTATCACGCCAATGAACAGTGAACAGGTTGTTCCGCTAATGCATTTCAGGGGAGCTGACCGTGAAGCCAGCAAAGAAGGAACCCCCACATCCAACACTCAACACAAGTTGAGGAGGTTGATATATTAATGACACTCAAACAGGCATGCTCCTCGGAATACCAAGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGFGGGGGGDGGEGGGGGGGGGGGGGGGFGGGGGEEFEFGFFGGGGGGGGEFGGGFFGFFGGGGFGGCGGGGGGGG67CCC9C56=:BFFAFD<>DGFGFFFEF7FCEECEFGG@::FC2,,>CEFDG,*=:8,,*4;:8:,>FGCDC9CFF;99CD)6-9@D):)44-694)- +@M02542:108:000000000-AJUMM:1:1101:9331:1287 1:N:0:4 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1:N:0:4 +ACGCCACGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACCTTTTGGTATTCCGAAAGGTATGCCTGTTTGAGTGTCTTGAATCATCACTTCAAAGAGTTTTCTTTGAATGAGGATTTGGGTGTTGCCATTTGGCTCGCCTTGAATGTGTTAGTGGGTCAGCCCAAGCTAGGTGTAATAAGTTTCATCCGGTGTAAGTGTCGTCCGCTTCCAACTCGCAAGGCTTTGGCCTGCATTTTCATGACTAGACCTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9FGGFGGGGGGGGGGAFGGGGGGGGGGGGGGGFGGGGFGGGGGGGGGGGFGGCFFFCEGGGGGGGGGGFGGGGGGGGGGGGGGFGGFFGGGGFDCEEFEFGFFFF:DDE@D;;FA=EF@EF?BBFFCF734:29A:?> +@M02542:108:000000000-AJUMM:1:1101:22605:1288 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGAGTTCAGTCAATTGTCTCAAAAGAGAGACAGTTAGAAGCTCGCCAAACACTTCACGGTCGCGGCGCAAAAAACTATCACACCGAGAGCCGATCCGCAAGGAATCAAGCTAATGCATTTGAGAGGAGCCGACGCAAGCCGACAAACCTCCAAGTCCAATCCTACAAATCCCGCAAAGGCTTATAGGTTGAGAATTTCATGACACTCAAACAGGCATGCTCACCGGAATACCAAGGAGCGCAAGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGFGGGGGGGGGGGGGGGGGGGGGGGGGFFGFGGGGGGGGGGGGGFFGDGGGFGGGGGGGGGGEGGGGGGCFFFFFF47).,7=C>?(((8F6*<*.4?1(-3<)666.74:?0((193 +@M02542:108:000000000-AJUMM:1:1101:8892:1288 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGCTCAGAGTTCAGAAATTTGTCCGAAGACGGTTAGAAGCGCGGACACTAGAATACCCTCCACAGCAACGCAGATAATTATCACGCTGAAGCGGCTGGTAACGTTCGCACTAATGCATTTCAGAGGAGCCGACTACGAGAGCCGGCACGACCTCCAAGTCCAAGCCTTCGTAAATGAAGCCGAAGGTTGAGAATTCCATGAGACTCCAACCGGCATGATACTCGGAATACCAAGGAGCGCACGGTGCGTT ++ +CCCCCGECFFGGGGGGGGGGGGGFG<@FDFGGGGGGGFGGFC@FFFEEFGCED8EFGGEGEAFFGGA@EEFGGGGGGDC:EFFEGDFFFGCFCEGGGDGFGFAFFF,,:?DFEA>:B:EFGGFGGGGGGFGGG@A,CCEG7:>FGF7==FGEEGGGGFEACGGFDGGC:8CEG8FEGGGG@G>:7:=:E5C7CCE7BCF>+A52>+5@E52>?FG0;*<*+*++1=F7*9FFGC2*796(9FC))(05C)+)..)9>B00(.)..5:0()*)85119?19((( +@M02542:108:000000000-AJUMM:1:1101:17523:1289 1:N:0:4 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+CCCCCFCEFCFGCGEC@FFECFDGDC@EFCECGEGFFCFF9FGGEEFFGGGGGGFFFGGGEGGGGGFFGFGCGGGGA9,FGGGGGGGGEFCBFGGFGFEGGCAFEGGGC7=FF=BFAFAFFCGFGGGCEEGFFGGGGGDGG8CF9,@@>EGGGCGEF**>>FGGD>GEC66CEFFCCEE,CC**=:8CE5:AC*:940AC3**1:=?*37C+0AFF7*9=7:FGFGD).,))97)4*9*)*-43(.65()-((-(23185);@*4,(3.(,,4 +@M02542:108:000000000-AJUMM:1:1101:12056:1290 1:N:0:4 +AAGAATGTGATGAAGAACGTAGCGAAATGCGATAAGTAATATGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGCGTCATTTCTCTCTCAAATCTTCGGTTTTGGTTTTGAGTGATACTCTTAGTCAGACTAAGCGTTTGCTTGAAATGTATTGGCATGAGTGGTACTAGATAGCGCTGAACTGTTTTCAATGTATTAGGTTTATCCCACTCATTGACCAGTAAAGTATTTGTTTATTACACAGGCTCGGCC ++ +CCCCCFGGGGGGGGGGGGGGGGGGGGGGFGGCGC;FFFFGGGCGGGGGGGGFEGGGGGGGF@FGEGFFGGEEGGGFGGGGEC@BFGGGGGGGGGGFCG9AF9?E9?DED,@DDGD@CCEGC8E9D;FGGGF>F:;EGGGCCCFGGGGGGGFGGGGGGF8@:C@FGGG9?FGFEG,8=4?@E@FFFFG8FGEE8EC=EECEEDC,9F,@E@3,@FD>CG8EFFD;9B5*6>EGG7C>E**427*=1;:CGGG5ACF7?FFC7A0*+)*;4:6:6)).58*)*,)0/)*((-(8>)()(599(.,47?535C0:<)-.<(4 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGFGFGCGGGGGFGGGGCFEGGGDGCGCEGGGGGFFGGDGGGDEGGGGG=EGGGGGGCFGGGGGGGGG=EEEDGD=@CFFFDDDFFFF>DE>BFFGFEF:?>>>>B??<1:BBBFFF3CBD9BFFFFB1( +@M02542:108:000000000-AJUMM:1:1101:21598:1292 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACATTTCAGAAAGTTGGGTGTTTTACGGACGTGGACGCGCCGCGCTCCCGGTGCGAGTGTGCAAACTACTGCGCAGGAGAGGCTGCGGCGAGACCGCCACTGTATTTCGGGGCCGGCCGGTAGAAGGCCGATCCCCAACGCCGACCCCCCGGAGGGGTTCGAGGGTTGAAATGACGCTCGGACAGGCATGCCCGCCAGACTACTGGCGGGCGCAATGTGCGTTCACAGATTCGATGATTCACTG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGFGGGGGGGGGGGGGGCGCECGGGGGGGGGGGGGEGGFGGGGGGGGGFGGGGGGGGGGGGGGDGGEGFGGGGGGDEEGGGGGGGGGDGGEEGGGG*?CGD:C5CEC=EC=C6C=DGGGGGGGGCEEEGGF*9>?7CGG5)9@)4*6CFF?E>CE5-(,(6**6:1:?:-54(4@:3F:4AA>FA<<) +@M02542:108:000000000-AJUMM:1:1101:19478:1292 1:N:0:4 +AAGGTGCTGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGCGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTAGTATTCTAGCGGGCATGCCTGTTCGAGCGTCATTTCACCACTCTGGCACTTCAGTGTCGGGCGTTGGGGCCCTTCTATAGGCGGTAGGATTTCCTACCGTACCCTGTAGGCCCTTAAGATCAATGGCGGGCCCAGTTGGAAACCCGAGCGCAGTAACCAATCTCGCTCAGGGGATATCTGGCGGGCTTTTCAGCCAACTTAAACC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGDGGGGFGGGGGGGGGGGGGGGGGFGFG+;CDGGGGGGGGGGFGGGGEEDE53<:5FGB184=**6@9>9>(40))**:5C<:0<>A9AB +@M02542:108:000000000-AJUMM:1:1101:11126:1292 1:N:0:4 +AACCGAGGGATGAAGAACGTAGTGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACAATAGTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGAAAAGTATTGGCAAGGGAAGTAATTCTTGTGAAAGCTGTTTATTCAATGTATTAGGTTTATCCAACTTGTTGATTGATAGTGGGAAGTAGTGATTGCTATTATGCTTG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGFGGGEGDGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGFFGGGGGGGGGFGGGGGGGGGFGGAFGGGGGGGGGDGDGGGGGGGGGEGEGGGGGGGGGGGGCEFD8FF?ABEDFGG@FGGEFGGGGGG9EFGCGGGGGGGGGGGCGGGFAEGGFFDAEFGDCEFGGGGFGDFFCCCFGGGGGGG69;CG5CGFCFEGGC5BFGE9CF998=C>>F+:BBAF+1=4A+==:3?/@>86=46<))9C@3EF7DFFCE)))9.)) +@M02542:108:000000000-AJUMM:1:1101:10459:1292 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGATCAAACGTTCAAAGAGCTGTCCTCACCGAGGAGAGACATTTGTGAGCTTCAGTGAACCTCCATTGCTGGAGGCTGCCTGGCAGAAAACCACAAGCGTAGATAGTTATCACACCTGTGATGCCACCAAACACTGGCAAGCTGATTCATTTGAGAGGAGCCGACCTGCAGGCCGGCAACACCCCCAAAGTCAGCGCTCATCACGGGCGAACCGTGAGGAGTTGAGATGTTCATGATACCAAAACAGGC ++ +CCCCC8@BFGBAF,CFEFEFDACE@FF<3A=F=,83,,8+D8,,@@;;,,@9+8DD3@D**5=>589<1*1/CED<***=*:/:5*;*+3+1*.5*111:+;)),7BGBFFF:FFE?:0(.7/:)-4-4A26)497C)*.((((((, +@M02542:108:000000000-AJUMM:1:1101:15106:1293 1:N:0:4 +AACGCGTTGATGAAGAACGCAGTAAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACAATAGTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGAAAAGTATTGGCAAGGGAAGTAATTCTTGTGAAAGCTGTTTATTCAATGTATTAGGTTTATCCAACTCGTTGATTGATAGTGGGAAGAAGTGATTGCTATTAGGCCCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGFDGGGGGGGGGGGGGGGGGGDGDGGGGGGGGGGGGGGGGGGGGGFFGGFGGGGGGFCCCFGGGGGCFG7FGGGGGGF9FGFGGGGGDG:CCGFDGFF7DGGGGGF>BFFGE6BFFDACEECCCFF?:=1;5(<@EFF7:7CCC?E3(3,1 +@M02542:108:000000000-AJUMM:1:1101:10839:1293 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTGCCTGATCTGAGGTCAAAGTGTTGATAACGATCAAGAGGAGCTTTCGGACAAGACCTAGTTAACCATAATCCCCGTTCCGTAGCTGGTCGATATGTTACTATCAAGCAAGGTGCAAGGTGGGCAAGTAAAGGTCACCACTTGTAGAAAGCCTAAAAACTCTTAAAGAAAGCCGACACAAAGCCGACAAGTGCTCCCGAACCAAACCTAGTCAAGCCGACAGGGAAAGCATTACACATCAAAGGGTAGGGATGGAGCGTT ++ +CCCCCGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGDFGGGGGGGGGACCGF<<,CEFFCFA,,:CFG8BFC@5,++,5,@DG*1@*,=;9*,*C:C<=F+=,,*4)*1/*25//0;C4:C7+06)(.)>DFB35*7*()).9*92)).).4(-(()1*.2(428(-(( +@M02542:108:000000000-AJUMM:1:1101:10366:1293 1:N:0:4 +AAGGCCATGATGAAGAACGTAGCAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCTTGAAGTCATCAACCTCTCCCGTTTCGTGCGGGCTGCCGGTTGGATGTGGGGGCATGCTGACGTGAGGTGGCTCCCCTCAAATGCTTCGGTTGGACCTGTGGGTCGAACTCGCCTGGGCGTTGTACCATCCTCGCTCCCCCGCGAGACGTTCTCCACTTATCGCCTCCTCCCT ++ +CCCCC7+@>+DC7C>C7,EFFCD+B:CC::FFF,DG>5>8DC**DFGEGGGG=57:7,-6249AAA41*0*,(((.44 +@M02542:108:000000000-AJUMM:1:1101:16039:1294 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAGGTCAACCTAATAAAATTTGGGGTTGTTGGCAAGCAACCGACCAGACCCTATAGCGAGGAGTATTACTACGCTTAGAGCCGACCGGCACCGCCACTGATTTTAGAGGCCGCTGGTGGGCGGGCCCCAATACCAAGCTAAGCTTGAGTGGTATAATGACGCTCGAACAGGCATGCCCTCCGGAATACCAGAGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTTAATTCTGCAATTCACATTACTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGFGGGGGGGGGGGGGGGGGDEEGCFGGGFFGGGGGGGGGGGGFGFFFGFFGGGGGGGGGEFFDGGGGGGFDFGGGGGGEFEFCCCC<@GGD:C?@FFFF??FGFF4)4:FFFFF)-.DGGGCFEGEGGGF4CFCGFEFFFGGFGGFCB:880685**;567@:ECFGFFEFA*;68@FEFFA<),)().))/8:*/8F<288:<< +@M02542:108:000000000-AJUMM:1:1101:19869:1295 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTCGAGGTCAGATTTCAAAGCATTAGACTGACCGCCGCTCGCACGGAACGGTCGAGGCGGGGGCAGAGCCGGAACCCATGGTCGGACGAGGACAATACAACGCCCGGGATGTCCGGAGACCCCACCGATGCATTTGAGGGGAGCCGCGTCGCCGCGGCAGGCCCCCACTTCCGCGGGTCCAAGGCACGAAACCTCGGGCCGCGATGAATTCAAGACACTCGAACAGGCATGCCCTTCGGAATACCAAAGGGCGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGFGGCFGGGGGFGGGGGGGGGGGGAFGGGGGGFGGGGGGGGGGGGGGGGGGEGGFGGEEFGGGGGGGGFFGGEEEE@CGDFGGEGDGED<ECGGGGGGDGGEC8C>F?FC7CGGGGGEDGEDCCEGGGD?ECEECEEEGGGGGFCE??23>FF?5:??0:?:??@B78EFD6:*,6>2?B>*48:CC8FCFG99991+7D5C*>2++1=71<:9:*02;0>@37C))277)4.7>5)58.)*024):2)7)4>643A(,4((*9C)*2(-1(((,, +@M02542:108:000000000-AJUMM:1:1101:22208:1296 1:N:0:4 +AAGTGGTTGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTGTGGCTTTCCACAGGGCACGCCCGTTCGAGTGTCACGTTAACCCTCGCCAGCGGTACGGCAACGTATCGTGAAGCGGATTTGGGCGTTGCCGGTCGTGAGATCGGCTCGTCTCGAAATGCATTAGCGAAGTGCGAAGCACGTGCGACGTTGATAATTGTCTACGCCTCGCGGACCTTGCTCCTCGCTTCCAATCGTCGTGAGACAATC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGDE>95@D):>A?B=@6::;<(4342<CDGGDGGFCEGGGG7>BFCEGDGFGGGGFGGGGGCEFGGGGEEF9@FFF*77**)))*9C4*69@*094>)6?FF>?A069(1(,,5/).142-1((-(( +@M02542:108:000000000-AJUMM:1:1101:21270:1297 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCTCACCCGATTTGAGGTCAAGGTTTATAAAACTCTGTCTTAGATGCAAGACTGTTTGAAGCGGGGTCTGAAGCGACAGTGCGAAACCCAAGACGTAGAAACATCTTATCACGTCAAGGATCGGCAAAGCAGACCCCACTAATCCATTTAGGAGGAGCTGGCTTCAAGGGCGGCCAGCAATGAAAAACCCCCAAAGTCCAAGCCTTCCCCGGTCAAGAAACCAAGAAAGGTTGAAGGATGTTCACGACACTCAAACGGCTGTGC ++ +CBCCCEFFGGGGGGGGGGGGGGGGGGGGGFGGDEGGGGGGGCFGFFF@BFE9C>>B9FGFF<0(((,.5A +@M02542:108:000000000-AJUMM:1:1101:10661:1297 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTACCTGATTTGAGGTCAAACTTGTTTGTTGTTTTGTAAGGCAGAGCCATGATACTAAAAATTCACTACCAAGAATTCTCAACGAGTTGGATAAACCTAATACATTGAAATATCCTGAAAGCACTATCTAGTACTACTCATGCCGATACTTTTCAAGCAAACGCCTAGTCTGACTAAGAGTATCACTCAATACCAAACCCGAGGGCTTGAGAGAGAAATGACGCTCAAACAGGCATGCCCTCTGGAATACCAAAGGGCCCA ++ +CCCCCGGGGGGGGGGGGGGGGGGGDFGGGGGGGDGGGGGGGGGGGGGGGEAFGGGFGGGGGGGGGFGFEGGGGGGGGGFCGGGGGGGGGGGGGFGGGGEFGGGGGGGGGGFFFGGDGGGGGGGGGGGGF7135?C6?**7BBFFGFF376@AF;(=;;@@A8AEFFD:DD>02:6444. +@M02542:108:000000000-AJUMM:1:1101:16758:1297 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTACCTGATTTGAGGTCAAACTTTGGTTTGTTTGTTGTAAGGCCGGGCCTAATAGCAATCACTTCTTCCCACTATCAATCAACGAGTTGGATAAACCTAATACATTGAATAAACAGCTTTCACAAGAATTACTTCCCTTGCCAATACTTTTCAAGCAAACTCAAGCATATAACCAGAGTATCACTCAACACCAAAACTATTGTTTTGAGAGAGAAATGACGCTCAAACAGGCATACCCTGTGGAATACCACAGGTTGCAATG ++ +CCCCCGGGEGGGGFFFGGGGGFFFFGGGGGGGGGGGGGGGGGFGGGGGGGGCFFFFFFGGGGFGFFGCFGGDGGGFGGFCGGGDGECEFGGGFEFFGGGGGGGGGGFGGGGGGGFFFGGDFGE?CFEGFGGA?FFGDDF8,AFGC99:EF:3,@8,:CFGFCC;FFFC?D>EEGC,@4?C7=,22;**:?*9CDFD8BA=F8D?>>A=FF?(((/)/).;3)6;EDFC,=CCEE8=B=3,4;;@D:AFG9,3DCF?5>5E7:;,,@DF7CGGG7C8C=((,,63(( +@M02542:108:000000000-AJUMM:1:1101:20000:1297 1:N:0:4 +AAGTGGTTGATGAAGAACGCAGTGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATCCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTGGCTTGGTGTTGGGCGACGTCCCCTTTGGGGACGCGCCTCGAAACGCCCGGCGGCGTGGCACCGGCTTTAAGCGTAGCAGAATCTTTCGCTTTGAAAGTCGGAGCCCCGTCTGCCGGAAGAGCTACTCGCACGGTTGACCTCGGAGCAGGCAGGGG ++ +ACCAB@E@FFFFFGGGFFGGEEFGGGGGGGG;CCC@CCFGFGFEAFF@CE@BFFCEEGGCAAFFGGFFGFG:<:7FBFGG7@@CEGE@7F>>88FE7*4*4==1/*?8?*:8EFCE5C::CF9CFE5*2>CG6+2??9CG*:5CC+2+<>/*95)/>755DDBF669CB>;@:*0<)4).0>E1>B3,2(42>)8*))1-303((((( +@M02542:108:000000000-AJUMM:1:1101:21933:1298 1:N:0:4 +AAGTTAAGGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGAATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAACATCCTTCAACCTTTCTTGGTTTCTTGACCGGGGAAGGCTTGGACTTTGGGGGTTTTTCATTTCTGGCCTCCCTTGAAGCCAGCTCCTTCTAAATGGATTAGTGGGGTCTGCTTTGCCGATCCTTGACGTGATAAGATGTTTCTACGTCTTGGGTTTCGCACTGTCGCT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGFGGFGGGEGGGGEGFGGGGGGGFGGGGDFGGGGGGGGGGGGFGGF8<7B5EFDGGGFFF5*AFGF+<:@+9CCCGGGG?GG=CCEEGF?776=CC5DGG*9@>?6C>)(8?7972):>BFFAFFFB(4<2(4>C>:<099>9-860 +@M02542:108:000000000-AJUMM:1:1101:19165:1298 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCCACCCGATTCGAGGTCAAACTTTGAGTAAATTGTCTCGCGACGATTAGAAGCGAGGAACAAAGTCCGCGAGGCGTAGACAATTATCAACGTCGCGCGTGCTTCGCACTTCGCTAATGCATTTCGAGACGAGCCGATCTCACGACCGGCAACGTCCAAATCCGCTTCCCGGCGTATCGCTACGTCGTTGGCGAGGGTTAACGTGACACTCGAACGGGCGTGCCCCGTGGAAAGCCACCGGGCGCACGGTGCGGTCACAGATT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGFGGGGGGGGCFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGEGGGGGFCFGDGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGFGGDFCFGGGGDFGGGGGGGGGFGGGFGGGGDCFEC9CFFFGGGDGGGGGCGGGFFFFGDD>EEFGG/CCE8EFGGGGGGFF):*9FC595CCDEGC95**)*294<<4>FCD556>>D:F?D>CE5?B:(874(8;621,4(-7.>D@)(40))6246 +@M02542:108:000000000-AJUMM:1:1101:15649:1299 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGCCAAAGCTTTAAAGTGTATTGTCCGTAAGGACGACTATAAGCAGCACCACTGAAGAGTTCCTAAGGCTGTGGCGCAGATAATTATCACACCGGTGCCCGGCACTCTAAAAGCGCAAGCTAATATATTTCAAGACGAGCCGACTACGGCACAGTCCAAGTCCACCTCGACAGACCGCATTAACAATCTGAGGGGCGATGGTTACGTGACACCCAAACAGGCATGCTCCGCGGAATACCACGGAGCGC ++ +CCCCCGGGGGGGGGGGGGGGGFGGGGGFGGGGGGGGGGGGGGGGGGGGGGFGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGFGFGGFDFFFGGFFGEGGGGC:FFFF4<@@)))9>F<<::@F?0@)4>::;00;:FCF>:13;9B>; +@M02542:108:000000000-AJUMM:1:1101:15461:1299 1:N:0:4 +AAGTCCGGGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTTCAACCCTCAAGCCCACCTGCGGTGCTTGGTGTTTGGGTCAGCTACGGGAGGATTTCCCCCTGTAGGCCCTTAAAAGTAGTGGCGGGCTCACCAGGGCTCCGAGCGCAGTAAATCATTTCTCGCTTTGGGTGTTCTAGTGGGGTTATCCAGCCGTAAAAACCCCAACTTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGDGGGGGGGEGGGG9FFGGFGGEGGGGGGC:8EEGGEE@6:76:775*7CE*87EC*5C77@>C?*:7::0//758*9<)),097*06)(.)75(9:92),(,(()*06*,43(3:B<- +@M02542:108:000000000-AJUMM:1:1101:12267:1300 1:N:0:4 +AAGGCCATGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCTTGAAGTCATCAACTTCTCCCGTTTCGTGCGGGCTGCCGGTTGGATGTGGGGGCATGCTGCCGTGAGGTGGCTCCCCTCAAATGCTTCGGTTGGACCTGTGGGTCGAACTCGACTGGGCGTTGTACCATCCTCGCTCCTCCGAGAGACGTTCTCCACTTATCGAGTCCTCCCTC ++ +CCCCCGGGGGGGFGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGFGGGGGGGGGGGGGGFGGGGGGGGGGGGDEEGEFGGGGGFGGGGGGGGGGGGGGFGDFGGGGGGGGGGGGGGGGGGGGGGBFEGDGGGGGGGGGGGFGGGGGGGGGFFGGGGGGDGGGGGGGGGGGDGGFGF6CFGGGGGGGGGGGGGGGGFGGEGGG5CGGGGGGG<:5<@FGDDDFFC@:02;>5?FFB))5BFFE;C>FFFCFACFEGGGGGGEG>EGDG*BFGFFGGGGGGGF9B?7F7:DCFFFFFD55::F5D)02<2??8F37>AFFFBE,*3;C>9D476*4,5=CC,,4B78CC+8?0/;C*/2:(+;7+=)*;*)08@3)+0;>C);04(,4:.7*:79::((,6). +@M02542:108:000000000-AJUMM:1:1101:16145:1302 1:N:0:4 +AACCACTCGATGAAGAACGTAGTAAAATGCGATACGTAATGTGAATTGCAGGTTTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTCTGGTATTCCGGAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAACCTTGTGTTTGGTATTGAGTGATACTCTACTTGTGTTAACTTGAAATACGGTTTTGGCAAGGGTGTGTTAAACAGCCGTCGTCCTCGATAATGTATTAGGTTCTACCAACTCGTTATAGTGGAAGGCAGTGTTGTCTAGCATGTAAGCCCGGCCTAACA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGFGGGGGFFGGGGGGGDGGGGFGGGGDFGFGGGGGGGGGGGGCFGGGGGGGGGGGGF9DE8D@EDGGGF9AFEGGDGGGGGGGG49:=7CCEGGGGG,BC?CG8AGFGGGGF>FDFFGFA3A5DFF<@FFFFFFF?EFEFAFF<***.),,4:?018 +@M02542:108:000000000-AJUMM:1:1101:12713:1302 1:N:0:4 +AAGTCGTTGATGAAGAACGCAGTGAATTGCGATATGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATTAAATTCTCAACTTCAAATGCTTTGCATTTTTGAAGCTTGGACTTTGGAGGTTTTTTGCCGGCATCAGTGTCAGCTCCTCTTAAATGCATTAGCGGAACTTTATTAAGGACCAGCTTTGGTTTGATAATCCTATCTATGCCGTCGCTGTGGACTTTGCTTGTTCAGCTTCT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9FGGGGGGGGGGGGGGGGGGGGGGGGGGCFGGFGFGFGGGGC>FGGGGGGFGGCFGGGGGCFG>CEGFCFF9FGGGGGFGGGGGC;7EEGCFGGFFE>ECDFGGGGGG@FFCFGGGFFGFFGFGC5@GA75C3:@7EFFDF(2455>2).@CFFGA2:4 +@M02542:108:000000000-AJUMM:1:1101:21675:1302 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAGGTCAACCTGATAAAATTTGGGGTTGTTGGCAAGCAACCGACCGGACCCTATAGCGAGGAGTATTACTACGCTTAGAGCCGACCGGCACCGCCACTGATTTTAGAGGCCGCTGGTGGGCGGGCCCCAATACCAAGCTAAGCTTGAGTGGTATAATGACGCTCGAACAGGCATGCCCTCCGGAATACCAGAGGGCGCCATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGCAATTCACATTACTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGEEGGDGGGGGGGGGGGGGD+CFEEGGGGAFGGGGGGGGGGGGGDGGGDGGGEFDDGGGGGGGGFGGFGGF??7CGFCGGFGGGGCFGGDE8CEGGGD0*5CGGGGGGGGGGGG*<:FFFG5;C557)936**207:@@GF????*.3:))69706@BB>A5465>*2:FGF246<)-.5 +@M02542:108:000000000-AJUMM:1:1101:12951:1303 1:N:0:4 +AACCAACTGATGAAGAACGTAGCAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACCCTCTGGTATTCCGGAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAACCTTGTGTTTGGTATTGAGTGATACTCTACTTGTGTTAACTTGAAATACGGTTTTGGCAAGGGTGTGTTAAACAGCCGTCGTCCTCGATAATGTATTAGGTTCTACCAACTCGTTATAGTGGAAGGCAGTGTTGTCTAGCATGTAAGCTCGGCCTAACAC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAFFGGGGGGGFGCGGGGGGGGGGGAFDGGGGGGGGDGGDGE=DGGGGGGDGEFGGFGGGGGGGGGGDGGGGGECFFGGGG7?FGGFFG8AGDG:DGGFFCFFGFA8A5CFEDE?C);;<=ECE<@C37?F7D:3(41:D:7( +@M02542:108:000000000-AJUMM:1:1101:13961:1304 1:N:0:4 +AAGGATCAGATGAAGAACGCAGTGAAATGCGATAAGCAATGCGAATTGCAGAATTCCGCGAGTCATCAGATCTTTGAACGCAGCCCGCGCTGGGGAGCTCTCTCCTCAGCATGTTTGTTTCAGTGTGTTTGGTTGACTTCAAACAGCTCAATGCGATTGAACTTGCTTCACTGCAAGGTCTCTCGTGAAAAGCGAAGGCGTGGGACTAAAACCCGCCAACGATGTGGTCACTGTCTAACAGTGGTTTCGTTGGGTAACATCGGATTAGTCATTTATGTACGTATTAAATTTTTAAATTCTC ++ +CCCCCGGGG@EFEFG,EDFGCCFGAFGGDGGGGGCFGFECFEFCCFFGGEGFGGGGGGGGDGGGGFCFGCDA:2@E46<655)/@65=46(4))()./:FFDA6?2))4)- +@M02542:108:000000000-AJUMM:1:1101:22980:1304 1:N:0:4 +AACGCGTTGATGAAGAACGCAGCGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACAATAGTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGAAAAGTATTGGCAAGGGAAGTAATTCTTGTGAAAGCTGTTTATTCAATGTATTAGGTTTATCCAACTCGTTGATTGATAGTGGGAAGAAGTGATTGCTATTAGGCCCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGFGGGGDGGGGGGFGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFGGGGGGDGGGGGGGGGGGGGGGGGGGGGGDCFFCCFFFGFGEFFD55CFGFFFFGGGFDG@FF4FFGGGGDFDF:FGGFGDC>>CGGGDCBC=6FFBFF6AFF77)67:+.8AE<;EFFF?E@FC=>?7CC<4(,4 +@M02542:108:000000000-AJUMM:1:1101:21296:1304 1:N:0:4 +AACCGCGTGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACGTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCAATGCTTGGTGTTGGGCCCCGCCGCTCACCCGGCGGGCTCTAAAATCAGTGGCGGTGCCGTCGGGCTCTGAGCGTAGTAATTCGTCTCGCTATAGGGCCCCGGTGGATGCTGGCCAACAACCCCCAATTTTCTATGGTTGACCTCGGATCAGGTAGGG ++ +@CCCCGGGGGGGG9@EFGGGEGGE7FGFGGGCEGGGFCFFFDCFGGGGGFFGGGGGAFEFGDGGFGFCGFDFDEGGGGGGGG7:CFFGGGGGGGGGDGGFGFBFEGGDEFCFFGGG7EDGGG?F9FGGGD9FEEG*::/8*285858:/>CC5>3*22907))4/.*)..8BGFGFFD4@972=>?AB?.<757:>B4)36? +@M02542:108:000000000-AJUMM:1:1101:11403:1304 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATGTCATAAAGTTGTCCACAAGGGACGATTATAAGCAAGAACACTGATATACTTCACGAACACGGCGTAGACAATTATCACACCGAAGAGCGATCCGTAAGATTCACGCTAATATATTTCAGAGGAGTCGACTTGGTAACAAGCCGACACTAACCTCCAAGTCCAAGCCTACCAAATCAACAAAGATTTGAGGGTTGAGAATTTCATGACACTCAAACAGGCATGCTCCTCGGAATACCAAGG ++ +CCCCCGGG;CCGGGGGDFGGGFFAFGGGGGFEGFFEEFACFGGGGGFGEA,C@EFGEEAF9FGFFGGGGFG9CF9EFGFFDC=8F:BF,AE5FFGCFEF@7F:6@FE@CFEFFFCE=E<3@FBDC:>C=FA0<)(- +@M02542:108:000000000-AJUMM:1:1101:20904:1304 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAAACTTTGTTTGTTGTTGTAAGGCCGAGCCTGTGTAATAAACAAATACTTTACTGGTCAATGAGTTGGATAAACCTAATACATTGAAAACAGTTCAGCACTATCTAGTACCACTCATGCCAATACATTTCAAGCGAACGCTTAGTCTGACTAAAAGTATCACTCAAAACCAAATCCCAAGATCTGAGAGAGAAATGACGCTCAAACACGCATGCACTTTGGAACACCAACGGGCGCAATGTCTGT ++ +CC@CCGGGEFCFGFGGCCFGGGFAEGGGGGGGEG+8CFFGGGFFGG+@=<=BCF9>D,,@>ECCCEFGCC:7*@;F>CF*,4<74325,=++*;947CFG8*:82-/?8A?(..9:*4.7.0=+(0)(,(63;(()*9.C>(()6))-. +@M02542:108:000000000-AJUMM:1:1101:11493:1304 1:N:0:4 +AAGACTCTGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATCGCAGAACTCAGTGAATCATCGAATCTTTGAACGCATCTTGCGCTCCTTGGTATTCCTTGGAGCATGTCTGTTTGAGTGTCATGAAATTCTCAACCTCCTATGGTTTGCTAGTCAGATCTAGGAAGGCTTGGATCATGGGTGCCTGCTGGCGGCCTTGTGTCATCAGCTCACCCTAAATAAATCAGTTGCACCGCTTAGCTTGGTGGCTTGACCTGATGTGATAGACTTATCATCAGTGATCTCCTTCATTGA ++ +CCC@CCFGGGGGGGGGGGGCGGCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGC7FGFGGG@FEFFGGGGGGGGGCFGFGCEFGCFGGGGEEG7C?FFGG>=:FFDCFGCDGGGF8E6CEE*AF:FGDCFF,ECFG?E?DCC7*=C,,525<24,>C66?=EEC>48B=CDFC**2))/;9:))7@FF7C)6CEAA6*68=DFFFFB;3CA=8)6;=)34FC64(3EF59545546+=7CF4?F3;491==)2:5==?;=()25(04;::8..-(9>*9:422?B?0(( +@M02542:108:000000000-AJUMM:1:1101:22369:1306 1:N:0:4 +AAGTGGTTGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACTCCTTGGGTATTCCGAGGAGTATGCCTGTTTGAGTGTCATTAATATTCTCAAAAACCTAACTGTGTGGTTAGGCTTTTTGGATGTGAGGGGTTTTGCTGGCTTTATCAAGCCGACTCCCTTTAAATGCATTAGTGGTTGCTTCATTCACTAGAGTGTGATAGTATATCTACGCTTGTTACAGTGAACTGATATAGATCATCTGCTTTCTA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGDFGGGGGCGGGGGGGEGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEFGFBFGGGGDFGGGFGGGGGGGGGGE@FEGGGGCGGGGGDGGEGGGGGGGGGGGGGGGGGGGGGGGFGFFGGGGFGGGGGGGGGGGGGGGGGGGGGGGGEGGGFFGFGFGGGG>F:@FDFGGGFDFFEFFGFGGGGGCFFGGGGGGGGGFDFG,,DFGGGGDFGGGGG78CGGGGGGFGFGCGEGGCEFFDF88=EGCGGGG9BCEFC7EEEGGGGGD5*9:6?FGF5DEDCC*7D>*)8><*;:7D76=F>09)5,40(41:FGFFC00(((,(1 +@M02542:108:000000000-AJUMM:1:1101:15496:1306 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTGCCTGATCTGAGGTCAAAGCGTTGATAACGATCAAGAGGAGCTTTCGGGCAAGACCTAGTTCACCATAATCCCCGTTCCGTAGCTGGTCGATATGTTACTATCAAGCCAGGTTCAAGGTGGGCTAGTAAAGGTCACCACTTGTAGAAAGCCTAAAAAATTTTAAAGCAAGCCGAAACAAAGCCGACAAGTGCTTACGAACCAAACCTAGCCAAGCCAAGGGGGCGAGACCTACCCCCAACAGGGTCGGGTTTGAGAGTT ++ +CCCCCGGGGGGGGGGGFGGGDGGFGGGGGGGGGGGGFGGGGGGGGGGGFFFGGGGGGGGGGGFDCFFGADEG:>6*@:CCGGGFG,84):=<8,4=CF+;?CF5=CC:FD:AD**;>C;5FD4:*)8()8))*-3:260705(,--.4(,,)9/7*4(-,.84- +@M02542:108:000000000-AJUMM:1:1101:12353:1306 1:N:0:4 +AATAAGCCGATGAAGAACGCAGCGAAATGCGCTAAATAATGTGAATTGTAGAACTAAGTGAATCATCGAGGTTCTGAACGCCTATCGCGCTTTTTGGGTTTCCGTGCGGTTTACTTGTCCGAGCGCCGTTTTATAATTCAAGCTTCTGCTCGTTGTTGTGATGTTTCAAAGTTATTTTTTGAAATTATTGAGCATGTTCTAGCCAGATCCATACCGTGACATTATCCCGCTACACATCTACTACCAACTGGCCTATTACTTAGAACTATCGCTTCGCCTCAAGTAATCCTACCCGCTTCAC ++ +A@CC8CF6C@F@E@FF=99,++83+,83+,,@,,87D,@<,8,,@,,E***,@@E,7@D,,,,?5?F@:2D9>B,,,,2,6,,04*,4*,,2B:7+**=C/*+*2<4=1++1+**)0****29**/)*1*1/.**2/<)(33)))-),(.).-44)1*2*0(.2,6(,)) +@M02542:108:000000000-AJUMM:1:1101:15407:1307 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATTGTCAAAAAATTGTCCTTGCGGACTGTTAGAAGCTCGAACACTGCTATACTTCAACACCACGGCGTAGACAATTATCACACCGAAGCGATCCGTAAGGTTCGCAACTAATACATTTCAGAGGAGTCGACTGTTGCCAGCCAACACGGCCTCCAAGTCCAAGCCTTCTTCACAAAAGTGTTGAAGGTTGAGAATTCCATGACACTCAAACAGGCATTCTCCTCGGAATACCAAGGAGCGCA ++ +CCCCCGGEECGFGGGGGGGGGGGGGEGFGGGEGGCFGFFGGGGGGGGGGGGGGGFGGGGDGGCFFGGGGGGGGGGGGEFCGG:CFGGGGGDFGGFGGGGGGGGCFAFGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGDEGE8FCGDFGGGDGGGEDGGGFFCFGFG9FFGGGG>F*DECFECBEGFCFFGGGGGG>E=*=:E>FGF6<+?F7CFGGFGGGGGGGGGG4<@C+*=+;>F+)09*::C>**6@=F4@2;?7B?:8:3)7*)*-9A0?61FCFGGGFGGGGGGGGGGGGGGGGFGGGGG:E=FGDAGGFADDDGGDGBFFFFGF>9<4) +@M02542:108:000000000-AJUMM:1:1101:9916:1307 1:N:0:4 +CCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGCCAGATCATAAAATGGGGTTTAGTCAAGCAAGCTTGATCTAAGAATTAGAAGCGGATCTAAAGACTTTCCTTATCTCGGCCATACTTTCGTATGTGCTCGTCGAAATACTTATCACGTCGAGTGGAACCGATTACAAAAAGGATCTGCTAATTCATTTCAAGCGAGCCGGTTCGTAAAAACCAGCAGCGCTCAAGTCCACGCCTTCAGCCTTAATAAAAAAGTTGAAGGTTGGTAGTTTCATGACCTT ++ +@CCCCGGFGGGG-FFFGEFGGGFGFG<9CD:CGGC;FGGGDGGFGFFFAEGDGDGGGGGGGGGFFFGG,,,7+@FCGF<,CFFGFGGAFG7DFFGGC5586,=@A:>EDGGGF?D;;D>F588CEG?C4*=96,/:?=E4*/006:C:7:=**17?*/:FC2)<27.06/6-9(5)((-1?:7*.4:44),)) +@M02542:108:000000000-AJUMM:1:1101:20046:1307 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAGGTCAAACTGTGGGGGTGGTCTTGATGGATGCTGATGTCTCGGTAGTCTCAGGAAGCGCAAACTGCTGCGCAAAGAGCCGATACAATCGCTGCCAATACCTTTAGGACGAGTCCATACTATGAGCAGGACAGCATCCAACACCAAGCAGGGCTTGAGGGTGTAAATGACGCTCGAACAGGCATGCCCCATGGAATACCAAGGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTAAATTCTGCAAT ++ +CCCCCGEGEFEGFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGDFDGGGGGFGGGGGGGGGGGGFGGGGGFGGGCFGGGGGGGGGGGGGGFGGGGGFFDGGGGGGGGGGGGGFGGFGGFGGGGDCGGGFGGGGGFGGFGEGEGFGGGGDF5:*A6B*=/C7CFFF7CCEGGGGFD?/:FEGGFC=E6DFFG4=C**9C3C@E>E>D)74:24@F<::FG,=FFG7C*@C9,>CC5@F@9D9>DC,?DGG8C*>CC8BEGF?9A,=CC8C8AF6**=F+A+:?+=*A5=5**189>7FGF7+.4)./*13?:)(8?7)8()*2/*.((-414( +@M02542:108:000000000-AJUMM:1:1101:21418:1308 1:N:0:4 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+TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAGGTCAACCATAGAAAATTGGGGGTTGTTGGCCAGCATCCACCGGGACCCTATAGCGAGAAGAATTACTACGCTCAGAGCCCGACGGCACCGCCACTGATTTTAGAGCCCGCCGGGTGAGCGGCGGGGCCCAACACCAAGCATTGCCTGAGGGTTGTAATGACGCTCGAACAGGCATGCCCCTCGGAATACCAAGGGGCGCAATGTTCGGTCAAAGATTCGATGATTCACTGACTTCTGCAATTCACATT ++ +CCCCCGGGGGEFGGGGFGGGGGGGGGGGGGGGGGEEGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGAFFFGGGGGGGGGGGFCGGGGGGGFGFGFGGGGEEFGFGGGGGGGCFGGCFGFGGGGEGEECGGGGGGGGDEGGEGGDGGEGGAFGFFGGGGEEGEGGGG@FGFGGGGGGGGGDGGGGG>EGGGGFGGFGF+B4:4 +@M02542:108:000000000-AJUMM:1:1101:10417:1320 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAATTGTCAAAGTGTATGCGCATCTAAAGAGACACAGCAGATTAGAAGCCGGCAGGCACAGGCACCGAGGCGGTCACAACGGCGATGAAGTTAGACTATCACACCGTGACCCGTCGGGCAACTAACGTGACCGAGCTAATGCATTCAAGGAGAGCCGAACCCCACAATGCAGGGTACCAGCAAGCTCCCAAATCCAAGCCACGTCTGCTTCAAAACCAAACGGGATTGAGAATTACCCGACACTC ++ +CCCCCGGGGDCFFGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGFGGGFAFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFEFFDFFGGGGGGGGGGFFFF8FFGGGGGGGGGFGGGGGGGCGGCCCCGFGGGGDGDEEDCFFGGGGGGGFGGGGGGGGFGGFGGGDGGGDFCF@CFFFF:FF@FGGGGGGGGGGGG?CGGGF5*8CCGGGGGEGGEEFFFGGGFDGGCCFGF6FGGFF6<*2)99DC*7CC:)9>)*)*.0@GF+8?::55),:(:,.(52(6*2C**,(,2118( +@M02542:108:000000000-AJUMM:1:1101:17364:1321 1:N:0:4 +AACCACTCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGGTTTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTCTGGTATTCCGGAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAACCTTGTGTTTGGTATTGAGTGATACTCTACTTGTGTTAACTTGAAATACGGTTTTGGCAAGGGTGTGTTAAACAGCCGTCGTCCTCGATAATGTATTAGGTTCTACCAACTCGTTATAGTGGAAGGCAGTGTTGTCTAGCATGTAAGCTCGGCCTAACA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGEGGGGGGGGGGGFGGGGFEGGGGGGGFGGGGGGFAFGGGGGGGGGGGG::FGBEGGGGGFFGGGCGDGEGGGGGGGGGGGDFGGGGGGFGFFGGFAGGD<>DGFFDF=GA:@48DFG;3@D4).-944)4A264.=FC?36(4?BB:: +@M02542:108:000000000-AJUMM:1:1101:13797:1321 1:N:0:4 +AAGTCGTTGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGCTATTCCGAAGGGCATGCCTGTTTGAGTATCATGAACACCTCAACTCTCATGGTTTACCATGATGAGCTTGGACTCTGGGGGTTTTGCTGGCCAGTGGTCGGCTCCTCTCAAATGAATCAGCTTGCCAGTGTTTGGTGGCGTCACAGGTGTGATAACTATCTACGCTTGTGGTTTCCCGCCAGGTATCCTTCAGCACTGGAGGT ++ +CCCCCGGGGGGGGGGGGGDGAFGGGFFGFGG;DEGGGAEFGFGCGGGGGGFFGGGGGGFGGFGGFGFGGGGGGGGGEFGGG@GGGGGGGG7FGGGGF?CFGFGGG@CGGG@EGFGGGGGGFFGGGGGGGGGFFCFGGFFCFGGGGGGGGGGFFGGGGG?EFBFGA9:9EGFGGGGF?FFFGGCFG>@2AGEG*9CCEG5EFAF<4*6(//:*8(7((4?4<9AFGG7EFGFCEFDGGGGGGGFGD?BF<:FC>FGGD?4AFFD?FBFB7;E::<7FFFFFFF:(4327AF4CFC8,4,(,47: +@M02542:108:000000000-AJUMM:1:1101:22591:1321 1:N:0:4 +CGCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCATTTCAACTACTCCGGTTATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAACACTACTGGTTATATTGATCATGCC ++ +CCCCC7FEGGGGGGGGGGGEGFGGGGGGFFGGGGFGGGGFEFGFFGGGGGGGGGGCFFGFCDGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGFGGGGGFEFGEGGGGGGGGGGGGGGGGGEEEGGGGGGGGFGGGEGGFAFGFGEGGGGCFGGGCFFGGFGCFCE=FGGGGGFCFFGGFGGGGGGG7EFGG,9DFFCDCFGFGGDGGGGGFGCF?CCFGGF+@F7=CCGGFFCAADGGFFFFFA>FBFF?268<3>A??A29C:?G26)6<<52. +@M02542:108:000000000-AJUMM:1:1101:17449:1322 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCTGAGGTCAACCTTGTTTGTTTGGTCTAAATGCGGGGCCCTGAAGCTAAGAACTCGCCTCGGGCAAGACTAATTTAGCTTTTTAAACTAAATCCAGAGACATATACTAAAGTCAATTTCTATGACTTATTCATTTCATCCTATTCAGACAAAGTCGTAGTATGACTATTCATATCTACCAATACCAAACTCTGGGTCCGGGGAGTGTTAGTAACGCCAAAAAGGCATGCCCCTTAGACTAACCAAAGGCCCA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG86EFGGGGGGGGA,CFGGGGGG9EG<,CFFDGG,,,6,<,CF,E,+@7F:F+4C,,5CF,F,CF=,,48+++++++8B+,BF5,,<,FF,,,,,CEFG9<5,,,,6,,,A,A,,5C,C,,:3,7@,,3,CFG9,3,C<=,C;3,3,,,8,,,3,,@,7,,,5>E,,3*@,*@,3,3DEG,,5,2,=:755=>CGF4FG8**04,4,2/**)2/7FEGGGC@EF7FG>CGEB+>FECF:F@FGGG73FGGFG@:FG*BA?8C+?CF:FFGCG@E@FGD7>7FFFFD7FFEG+>:,7E+@CE7CE:CGC*1>:,;;?C>C*8::BBEFGGGCGGF++=CFGGGG)187C<)*2*0:@5F5**2:1)*0@4CC>2::*9>>F)5>:6:5).:089476?:5(80,.-).45*9)*4)3)))4), +@M02542:108:000000000-AJUMM:1:1101:21739:1323 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCAGGTAGTCTCACCCAATTTGAGGTCAAGGTTTATAAAACTCTATCTTAGATGCAAGGCTGTTTGAAGCGGGGTCTGAAGCGACAGTGCGAAACCCAAGACGTAGACACATCTTATCACGTCAAGGATCGGCAAAGCAGACTCCACTAATCCATTTAGGAGGAGCTGGCTTCAAGGGAGGCCAGCAATGAAAAACCCCCAAAGTCCAAGCCTTCCCCGGTCAAGAAACCAAGAAAGGTTAAAGGATGTTCACGACACTCAAACAGGTGTGC ++ +CC@@CEDGFGGFCEGGGGFGFAEFFCEEFFGCFGEADCFB@F,FGC;7D,C7CCEG8*8D,62>8*6:CFF;E9,=DC575/:555?F?79:+==E7A5;))7/)*99:).35F<508?)7*+.4)69;=(0)669:6(7()29;C7<2(58-(. +@M02542:108:000000000-AJUMM:1:1101:11341:1323 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACCTTGTAAAAAAAAGTTTTTCCCAGTGAAGGGAGAGGACCGTGGCCCGGACGCCCTGGGTCCGATACGTGCTCAGTTAAGAAGCTCAGTGTACCGGGGGCTTCACGGGGCCGCCGTCATTGTCTTTAGGAGGGGTCGAGGGATACACCTCGACCAGGCCGTCCAACACCAAGCCGGGGGGCTTGAGGGGTGGTAATGACGCTCGAACAGGCATGCCCTTCGGAATTCCAACGGGCGTCATGTG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGGGG=FGGGGGGGGC*:4?:DD)1)1:>7C**4)093834)9.*(.4:656::<:040)-.:=*7>D>1,(,24>5 +@M02542:108:000000000-AJUMM:1:1101:9231:1323 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTACCTGATTTGAGGTCAAACTTTGTGGAAAGTTTGTTAGGCAGAGCCGGACGTTCCTGGGTGTTTCCATGTCAATCAACGAGTTGGATGAACCTAATACATTGAATAAACTGGGCAAACCACAAAAACAGCTCGTGCCGATTCATTTCAAGCGAACTTCACTGAAGAAGTACCGCCCATAACCAAAACCCGAGGGTTTGAGAGGGAAATGACGCTCAACCAGGCATGCCCTCTGGACTACCAGAGGGCGCACTGTGCGGT ++ +CCCCCFGGGGGGGFGGDECFEGGGDGGFGGFEGGGFGGGFGGGGGD@FGGGGGGGDFDGFGGGGGGGF9FCE=EEGCGGGGA9;CEEGEGDG@DDCCGGG98D;,,;**1=:,,>C*4CC=C4CCDGC5C*/*155FF<3A4?C7:<*175>).*)02.9*9F(410))/(/2212)..-2:9DB)(5-)--(4 +@M02542:108:000000000-AJUMM:1:1101:13915:1324 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAATTGTCAAAGTGTATGCGCATCTAAAGAGACACAGCAGATTAGAAGCCGGCAGGCACAGGCACCGAGGCGGTCACAACGGCGATGAAGTTAGACTATCACACCGTGAACCGTCGGGCAACTAACGTGACCGAGCTAATGCATTCAAGGAGAGCCGAACCCCACAATGCAGGGTACCAGCAAGCCCCCAAATCCAAGCCACGTCTGATTCAAAACCAAACGGGATTGAGAATTACACGACACTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGFGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDFGGGGGGGGFFGGGGGDGFGGGGGGGGGEGGGGG7EFGEG@FGGGDGGEGGGFGGGGGFFGEGG5CGF8C=CE5CGGDEFCDGFCDFGGGF6FCFFCCGGFD3>FGGGGFGFFF9>FDF4:?BG6C>?F?)8>?B<<0:?3F>)4 +@M02542:108:000000000-AJUMM:1:1101:10255:1324 1:N:0:4 +AACCAACTGATGAAGAACGTAGCGAAATGCAATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGTTAATATCAACCCCGACGGTTTTTAACTATTGGGTGTTGGACTTGGAGGATAGTGCTGGCTGCAAAGTCGGCTCCTCTTGAATGCATTAGCTTTGGACCTGTGCGCGTTTGCTAGCGGTGTAATACATTTTATTCACCACGGGCCGTGTCACTATTAGGGTCTGCTTCT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFFEFGGGFGGGGGDGFFFGCFGGFGFGGGGGGGEF8BFGGFGFFFGGGGGGEGGGGGFGGGGGCEGGGEGCA9DEGGGG,DECGCGE5CD8B?EC;DGFGGGGFG?DEC9EDF=EGDDG4:DGD5EC6>CFEGCC*;>FFF?F0>>BF73836<4))64CDF92F?>9):FFFD?D9A>BF:BB>*/8*6.41((,33 +@M02542:108:000000000-AJUMM:1:1101:13146:1324 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATGTCATAAAGTTGTCCACAAGAGACGATTATAAGCAAGAACACTGATATACTTCACGAACACGGCGTAGACAATTATCACACCGAAGAGCGATCCGTAAGATTCACGCTAATATATTTCAGAGGAGTCGACTTGGTAACAAGCCGACACTAACCTCCAAGTCCAAGCCCACCAAATCAACAAAGATTTGAGGGTTGAGAATTCCATGACACTCAAACAGGCATGCTTCTCGGAATACAAAGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFF@EFD7CEGCDFGGGGGGGEEEGEGGGGFC=CFFGGGFF7CFGF4CG=;?:C467@@AF/*9/>DA48?FF=?AFFFFF?)4(999()(1434:)).1:9FD??F<)),2( +@M02542:108:000000000-AJUMM:1:1101:18157:1324 1:N:0:4 +AAGACAGAGATGAAGAACGCAGTAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCGTGTAATTCTCAATCCCGTTTGGTTTTGAATCAGACGTGGCTTGGATTTGGGAGCTTGCTGGTACCCTGCATTGTGGGGTTCGGCTCTCCTTGAATGCATTAGCTCGGTCACGTTAGTTGCCCGACGGTTCACGGTGTGATAGTCTAACTTCATCGCCGTTTTGACTGCCTCGG ++ +CCCCCGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGCCFGGGGGGGGGGGEFGGGGGGCGGGDFGGGGGGGGG@FGGFGGGGGGEEGG8BFGGFFGGGGGFCFGGGGFGDF7FFGGGGDGAFEGGGDGGCGGGGGGGEFGGGGGGGGGGDCG>EFGDGD>CFFGGFGGGGGGDGC76@FGCDGGGGGGFAGGFFFFG38CDD36=F5>;075:@9<<9<:1207>**0/5)62722:: +@M02542:108:000000000-AJUMM:1:1101:9730:1324 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACCTTGTAAAAAAAGTTTTTCCCAGTGAAGGGAGAGGACCGTGGCCCGGACGCCCTGGGTCCGATACGTGCTCAGTTAAGAAGCTCAGTGTACCGGGGGCTTCACGGGGCCGCCGTCATTGTCTTTAGGAGGGGTCGAGGGATACACCTCGACCAGGCCGTCCAACACCAAGCCGGGGGGCTTGAGGGGTGATAATGACGCTCGAACAGGCATGCCCTTCGGAATTCCAAAGGGCGACATGTGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGAGFGCGGGGCFFGGGFGGGGGGGGGGGGGGGGGGGGGGGGGG7FGGFGGGGGGGGGFFGEGGGGDCGGDEGGGGCGGGGGGDGEFC=CE7CGCGDCCF5EEGGGGGCD5=E64@GG3><>CF*::?::5:C37<@F4)*5:>)7)7:FFF?(564:)9DF>C1((4(,-). +@M02542:108:000000000-AJUMM:1:1101:22088:1324 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGACTTCAAAGCTTTTGATTGACCGCCCCTCGCTCGGAACGGTCGAGGCCGGCGACGATACGGAACCCATAGTCCGTAGTGCATAATCGAACGCCCGGGCTGTTTGGCACCCCCTTTGCAGAACCTTATGGCAGGCGCGCCGACGTAGACTACCCCCCACTCCGCCGCTCCAAGCTACAAAGCCCAATGACCCTCATACATTCAAAACCCCCGAACTCGCATACCCTTCGAAATACCTAAAGAGG ++ +CCCC6,,++8,+48,,=>+44B+++++6+8++3+3>+38++,,B,<,+38883,73,@F3+:,,35543CC7<*>,3,*,8,*1=**:;****1*1/*9*3**+++*302*1**)**9)0*9*****1-1**1*(0)1.*(4((*)0(.,)..4(.(,)11*23))))).(( +@M02542:108:000000000-AJUMM:1:1101:11700:1325 1:N:0:4 +AAGCCTTGGATGAAGAACGTAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCCAGTGAGTCAACGAATTTTTGAACGCACATTGTGCCCTTTGGTATCCCGACGGGCATGCCTCTTCCAGCGTCATTATCACCCCTCGAGCCCCGAGGCTAGGTGTTGGACGGCTTGGTCAGTTGTGAGACTAACCCCTCGTAAAGACAATGACGGCGGCCGAGTGGGATCCCCGGCCCTCTCACCCTCTTAATTGAGCACATGTCGGATCAAGCGGGCCCGCGACCCGGTCTTGCTCCGTCATCTG ++ +<<@CCC9FGGG,22*,?7:?,>,6>*>5:*;:8,4:,?EGG983**3:/*****;/*0**29<**)**22**0:*:74*06**2*2***.9)0**)),8)**+,((-)))()(-((4(,-3****2)(-(,,5)) +@M02542:108:000000000-AJUMM:1:1101:15082:1325 1:N:0:4 +AACTTGCAGATGAAGAACGCAGTGAAATGCGATAAGTAATATGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAGAGGGCATGCCTGTTTGAGCGTCATTTCTCTCTCAAGCCCTCGGGTTTGGTATTGAGCGATACTCTTAGTCAGACTAGGCGTTTGCTTGAAAAGTATCGGCATGAGTAGTACTAGATAGTGCTTTCAGGATATTTCAATGTATTAGGTTTATCCAACTCGTTGAGAATTCTTGGTAGTGAATTTTTAGTATTATGGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFF:FGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGFGFGGGGGGEGGGGGGGGGGGGGGGGGGGGGFEGEGEGDGGGGGCDGEGGGFGGGGGGGFGF=BFFEEGGCFGGGGGFGFFGCFCEEE>,@8,;;;7>E0?FEEE=33?CCF7F4*/1))./))( +@M02542:108:000000000-AJUMM:1:1101:11868:1326 1:N:0:4 +AACCAACTGATGAAGAACGTAGCAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGTTAATATCAACCCCGACGGTTTTTAACTATTGGGTGTTGGTCTTGGAGGATAGTGCTGGCTGCAAATTTGGCTCCTCTTGAATGCATTAGCTTTGGACCTCTTCGCGTTTGCTAGCGGTGTAATACATTTTATTCACCCCGGGCCGTGTCACTGTTAGGGCCTGCTTCT ++ +9BCCCFGGFFEF9F<6CECFAFFF>@C73,8,5@C:FEGGGG9,,3@9E@:,><+B8?CC*;C*=,57:4:E5/1+2+6.79<7C+;FF3@AGC+7:@C+=20,,)086)3EFGGGGGGGGEECGDFFG@GGGGDFGGGGGGGEGEGCEFFFEG?EG:EGCFGDEGG5AF*8CE*;>*3CFGD?8=CGGGGGGGF5CFFFCFCCC3E**2A<:9<<::D))))1*6@BFF)8@066>:C9A:(855)*)),-2(4:?*2:*:>BBA13((- +@M02542:108:000000000-AJUMM:1:1101:8418:1327 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTGCCTGATCTGAGGTCTAATCTTAAGAATGACTAGATGGGTTTGAAGCTTCTAACTTTTCATGTCTCGGCCACTCTGAAAAAGTGTCCTCAGCGAATAGTCTATTACGCTGAGTCAATCCGATTACGAAATTGAGATGCTAATGTATTACGAGCGAGCTAATTACATAGCAGCGTTCAAAATCCAAACACCACAGCAGATCAACAAGGAACCGGTGGGTTTCAGCGTTCATGACACTCAAACAGTCATACCCCCCGGAAT ++ +CCCCCGGCFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGFCE6BCFGDGGGGGGEC3,4*4CE7FFF>7CCFFG>>?CC,;C6,4,<6;DF4);CCC55:3>0A>*+318)C)/(<))97)3;177?BF)3<**:)*(-,((,3( +@M02542:108:000000000-AJUMM:1:1101:16468:1327 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAGGTCAACCTAGAAAGATTGGGGGTTGCTGGCGGGCGACCGGCGGACCCTATAGCGAGGAGTATTACTACGCTAAGAGCCACCCGGCGCTGCCACTGCGTTTGAGGGCGGCAGAGCTGCCAGCCCCAAGACCACGCCTGGCGTGATTTGGTCATAATGACGCTCGAACAGGCATGCCCCGCGGAATGCCACGGGGCGCAATGTGCGTTCAAAGATTCGATGATCCACTGAATTCTGCAATTCACATTACT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGFFGGGCGGGGGGGGGGGFGGGGGGGGGGGGGGGGEFGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEEDGGGGGGGGGGGGGGGGGGCEGGGGGDGGFGFFGGGGGGGEE5FEGGDG8CGGGFGGGEG*CGGGGGGGCFGGGGGGE?CC8F5CCC5DC?<9>GCFDFF:>>4@F.7?FF5>FA)9*12<24>FFF:6*-.:)6>DB2 +@M02542:108:000000000-AJUMM:1:1101:15290:1328 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGCCAGATCATAAAAGTGATGTCCGAAGACAGTCAGGTTAGAAAGCAGACGTTTGCCAGAGTCTTGGCCACCCCAGAAGGGATGTCCTCAGCGAAATACTTATTACGCCAAGTAGAACCAAGTCAATAGACATGTCCAGCTAATCCTTTTAAGGTGAGCAGCACAAGACCGCAAGCACCCAAATCCAAGCCAAGAACAAGGGCCTAAACCCAAGTCATGGTTGATAATTTTCATGACACTAAAACAGGC ++ +CCCCCGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGFGFGGGGGGGGGGGGGEFDFGGFDGCGGGGG<FCFGGGGGFGFFFFGGGDGGGDFEFGGGGGGGGGGGGGGGGGGGCFGFGFFFGGGGGGGFEFGGGGFGFGFFGFFFCFGGGGGGGGGGFGGGGG>ECEGGGGFDFGFFCCFDGGG4F:5FGGGFDD3AB@FF<;A6CEE8>6)<<49A9AAAFB9F*:)*((.-5601( +@M02542:108:000000000-AJUMM:1:1101:19793:1329 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTACCTGATTTGAGGTCAAAGCGTTGATAACGATCACAAAGAGCTTTCGGGCAAGACCTAGTTCACCATAATCCCCGTTCCGTAGCTGATCGATATGTTACTATCAAGCCAGGTTCAAGGTGGGCTAGTAAAGGTCACCACTTGTAGAAAGCCTAAAAAAATTTTAAAGCAAGCCGAAACAAAGCCGACAAGTGCTCACGAACCAAACCTAGTCAAGCCGCGAGGGCAAGACCTACCACCCAAAGGGTAGGGTTTGAGAGTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFDFGGGGGFGFGFGGGGGGGGGFGGFEGGFCFGFGGGGGFGG5>ECEGGFC?FECGDEC;=CGGGGCEGCGFGG>F;F6+:>FFF?3)1.)(8)9>57<(,=6>))(43618((.9D3>9<44A0(58. +@M02542:108:000000000-AJUMM:1:1101:10625:1329 1:N:0:4 +AACGCGTTGATGAAGAACGTAGTGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACAATAGTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGAAAAGTATTGGCAAGGGAAGTAATTCTTGTGAAAGCTGTTTATTCAATGTATTAGGTTTATCCAACTCGTTGATTGATAGTGGGAAGAAGTGATTGCTATTAGGCCCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG@FGGGGGGGGGGGCFFGGGDGGGGGGGGGGEFGGGGGGGGGGGGGGGGGGGGGGGGAFFGGGGGGGGGDGDFGFGGGGGFGFF?EFCGGFCGGEGGGFGGFGGGGF@F7:CA;EDFEFAF7BFGGGGG>F9BEFF*?8BF?GCC3<8<8FA>A87;@E?<5EF7FF7C5>>EGED;C6;B6F74CCFFF:09=:@74>BF222(0CDDDFF0:?B434 +@M02542:108:000000000-AJUMM:1:1101:20553:1330 1:N:0:4 +AAGTCGTTGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACCCTTTGGCATTCCGAAGGGTATGCTCGTTTGAGTGTCATTGTACTCTCACACTCCCGATCTTGGTTGGGAGCGGTGGACTTGGGTGTTGCTGCTTATACCGTGGCTCACCTCAACTGGATTCGTGCATCTCTTGGTTGGACATAGTACGGCGTGATAAGTGTCTTCGCCGGCGCTTCACTAGAGGGTGGCCGATCGGGAGCTCTGTGCTTC ++ +CCCCCEFFGGGGFCFGGFGGGDEFGDECEG@CGG@FGFGGGGGGGGGGFFFGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGEGDEFFFFGGGEEFFGCFGGGGGGGGGDEEDEC5CCFG?9FF?C?F75CCGGGFG@FGCE59=CFFF>DGGGGG=>D8B5>5;)).69>BB:9?73(34663/>>74AEGCEEGDGGG6CGGGGGCF7?EGGGE55C37FDF>FGF53:EGF@BFFGFG4<16BB>B>BAFFB:0((*2067<.2:<2)46 +@M02542:108:000000000-AJUMM:1:1101:21206:1331 1:N:0:4 +AACTCGCTGATGAAGAACGTAGCGAAATGCGATAAGTAATATGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAGAGGGCATGCCTGTTTGAGCGTCATTTCTCTCTCAAGCCCTCGGGTTTGGTATTGAGCGATACTCTTAGTCAGACTAGGCGTTTGCTTGAAAAGTATCGTCATGAGTCGTACTAGATAGTGCTTTCAGGATATTTCAATGTATTAGGTTTATCCAACTCGTTGAGAATTCTTGTTAGTTAATTTTTTGTATCATGGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGG9FGGAEGGGGGGGGGGGGFEGGGGCFGGGG@+C>D9D8F:EEDC;EFF6,,>3E,E77,3@8;DE;,>=EFFE?C7,+25=@+4,,2<,>CE@C<,,=AC888+++4=@*@@6AAFFF(;5*)63)7C687>+4??E)9)<6+CD)).)--)))), +@M02542:108:000000000-AJUMM:1:1101:18142:1331 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGCCAAAGCTTTAAAGTGTATTGTCCGTAAGGACGACTATAAGCAGCACCACTGAAGAGTTCCTAAGGCTGTGGCGCAGATAATTATCACACCGGTGCCCGGAACTCTAAAAGCGCAAGCTAATGTATTTCAAGACGAGCCTACTACGGCACAGTACAAATCCACCCCGACGGACCGAGTTAACGATCAGAAGTGCGAAAGTTTACGTGACACTCAAACAGTCACGCTCCGCGGAATAACACCGAGCGC ++ +CCCCC@ECFGGFBFEC,FFEEDEEFADGGFCCFGF>;99C6C6ECE5:)*)1:C3*21*4CFD7*:*2*94*0*/93)/201*6575>>2FFCFGA2:<**9)01321(4(((0*7*9)(-3(((,- +@M02542:108:000000000-AJUMM:1:1101:14788:1332 1:N:0:4 +AATAAGCCGATGAAGAACGCAGTGAAATGCGATACGTACTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGAATTCCGAGGGGCACACCCGTTTGAGTGTCGCGAACATACTTCAAACTTTCTTTGTTTCTTGACCGGGCAAGGCTTGGACTTTGGGGGTTTTTTATTGCTGGCCTGCCTTGAATCCAGCTCCTCCTAATTGTATTAGTGGGGTCTGCTTTGGCGCTCCTTGACGTGATAAGATGTTTCTACGTCTTGGGTTTCGCACTGTCGTT ++ +@BCCCCF,@+@@-CC,EFGE7:@F9FFCFDG,@7F86C,,CCFGCCGG@?BFDEFGGF+4C>+@D,7AC9C,,7?FE:+@:C>BCC>F7>B,@EGGGDGG7=C*6,?99B1+;*3**3A9<1((()),(- +@M02542:108:000000000-AJUMM:1:1101:15034:1332 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGAGTCATAAAGTTATTGTCCGTGAGGACGATTAGAAGCAGACCCTAATAGTGACACGGCCCGTGGTGAATAAAATGTATTACACCGCTAGCAAACGCGCACAGGTCCAAAGCTAATGCATTCAAGAGGAGCCGACTTTGCAGCCAGCACTATCCTCCAAGTCCAACACCCAATAGTTAAAAACCGTCGGGGTTGATATTAACATGACACTCAAACAGGCATGCCCCTCGGAATAGCCACGGAGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGFGGGGGGGGGGGFFGGGGGGGGGGGGGGGFGGGGEGFGGGGGGFGGGGGGGGGGECCFFEFFFGCFGGGGCECGGGGGG8FEGGGGGFGGGGCFCFE=EDGCFFGGG9FFFFGGGGGGGFGG?EEFGEGGGGGGGGGGCEGGGFFGGFGGGGFFCF?:CFGGGGG:2=C5CFFFBF?C0.*7/*6,5(,(-14 +@M02542:108:000000000-AJUMM:1:1101:11549:1332 1:N:0:4 +AAGTGGTTGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGATTTTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACTCCAAGGGTTTCACGACCTTTCGGAGATTGGACTTGGAGGTGCTGGCCGCATATTGGTCGGCTCCTCTCAAATGCATCAGCGGAATTCAACCTTTGGCTTCCGGATGTCAGTGTGGTAATCATGTTGCGCTGTCGTTTGATCCCTCAGAGTCCGCTTAT ++ +CCCCCGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGEGGGGFGGGGGGEFCFGGG5CECGEGGGGFFFGGGGFGGGGGGGGGGGGGGCFGGGGFGGG4CDAAGGFFGCFFFFFFD+7>(7>F?F?BFB246:?F4D9=<.669:164 +@M02542:108:000000000-AJUMM:1:1101:16998:1333 1:N:0:4 +AACGCGTTGATGAAGAACGTAGCGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACAATAGTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGAAAAGTATTGGCAAGGGAAGTAATTCTTGTGAAAGCTGTTTATTCAATGTATTAGGTTTATCCAACTCGTTGATTGATAGTGGGAAGAAGTGATTGCTATTAGGCCCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGFGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGFGGGCGFGGGGFFGFGGGGGGGGFGGGGGGFDGFCC7@EFGFGGFFDGGCDFCFF3;A7?FFFFGF7;CE)1;A0448;34?E?FCF>ADCC3?446;@ +@M02542:108:000000000-AJUMM:1:1101:9371:1334 1:N:0:4 +AAGGCGCGGATGAAGAACGCAGTAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGCACTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCCACCATCAAGCGCTCCAGCTTGCGTTGGGGTTCTGCGGCTGCCGCAGTCCCCGAAAATCAGTGGCGGGCTCGCTGTCATCACCGAGTGCAGTTGTTCTCTATTCTCTCACCGATGCAGCGCTCCTTGCCGCAAACCCTCCCCCCAACTTTTCCAGGTTGTCCTCGGATC ++ +@CCCCC:@ECFGAFGAEAFG7FFGFGF:3@FFCFCC,FF,>71FFFGGCCEG+,<<:8**4+>B;;B8**:88C8>:CC8>G+::++:+:EF++10)95@:C653C<36A=?FE)-))*0*.40237>6D6?<2)4A)4)*9>/64-)-(,(7 +@M02542:108:000000000-AJUMM:1:1101:17999:1335 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCCACCCGATTCGAGGTCAAACTTTGAGTAAATTGTCTCGCGACGATTAGAAGCGAGGAACAAAGTCCGCGAGGCGTAGACAATTATCAACGTCGCGCGTGCTTCGCACTTCGCTAATGCATTTCGAGACGAGCCGATCTCACGACCGGCAACGTCCAAATCCGCTTCCCGGCGTATCGCTACGTCGTTGGCGAGGGTTAACGTGACACTCGAACGGGCGTGCCCCGTGGAAAGCCACGGGGCGCAAGGTGGGTTCAACGCTT ++ +CCCCCGGGEFGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDFGGGGGGGGGGGGFGGGGG7FGEGGCEGGGGGGGGGGGDGGGEFGFGGGGGGGGGGGGEGGGG>GCF9CFGGGG84:CFGEFGGGGGFG8EECGG88CEGCEGCEGFGGG<=CGDFFG=7CGG5())10<<7)1)7,)(3;4)(010920(((4/**073:>))((,- +@M02542:108:000000000-AJUMM:1:1101:15634:1335 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACCTTGTGAGGTTAGGGGTTTAACGGCCCGACACGCGCCGAAACGTCCCGAGCGATAGGTTCTACTACGCTGAGGTCCCGGCGGGCCCGCCACTGTAATTCGGGGCCTACAACGCTCAAATGCGCTGTAGTGCCCCAACGCCAGGCTCGCTCCCCTCTCGAGGGCGGCCTGAGGGTCGTAATGACGCTCGAACAGGCATGCCCACTAGAGTGCTAGTGGGCGCAATGTGCGTTCAAAGATTCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGDGGGGGGGGGGGGGGGGGGGEGGGGGGEGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGEFEG6FGGEGDDGGE8EFG*;CEEFGGG8E8E7>?*769>67319BB>:44BD3;C44<5<<2< +@M02542:108:000000000-AJUMM:1:1101:20007:1335 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATTTCAAAGTCGAGCTTTGTTGACCGCCACCCCACGGGCAGGTCTAGGGAGGACTCGATAAGTGGAGAACGTCTCTCGGAGGAGCGAGGATGGTACAACGCCCAGTCGAGTTCGACCCACAGGTCCAACCGAAGCATTTGAGGGGAGCCACCTCACGGCAGCATGCCCCCACATCCAACCGGCAGCCCGCACGAAACGGGAGCGGTTGATGACTTCCAGCAACCCAAACAGGCATGCTCCTCC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGFGGGCEGGGGGGGGGGFGFFFGFDFGGGGGGGGGGGGFFGGFGGGGGGGDFGGGGGGEEDDFEFGGCFEGGGGFGFFA,?FFDGGGGGGGFEGGFGGDGGGG+FFFFGGGGGGGDFEGCG7DE2?>FCCFEG*88BCF<;C59/*8:CGGFFECGFGGGGDEDCFFG*:>)***./((.(-30<6)29)*,.))6)(., +@M02542:108:000000000-AJUMM:1:1101:9808:1335 1:N:0:4 +CCAACTGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGTTAATTTCAACTCTGATGGTTTTTGTTAACCATTGGATGTTGGACTTGGAGGTTCGTGCTGGCTGCAAAGTCGGCTCCTCTTGAATGCATTCGCTTGGACTTGTGCGCGTTTGCTAGCGGTGTAATACATTTTATTCCCCACGGCACGTGTCACTATTAGGGTCTGCTTCTT ++ +A9CCCFFFAFGAFFFAFFEFFGGEGGFCEA8=:CCFD>>,>3DC,33@,=*@CGCCD,,::C,@CDEEG5C=8+;?CD5D7:+;87867@CCF++*2,107))8:@14(<<:44-*2*)24(44EFGFECGGGGD5CFGCEFCEGFGCEGGECEGGDGFFGG9?E5C):CGGCFGC7EFGFGGGC+06760*9::*0:C=FFA@4C?=4@F>=A<((47>?>4).8<(86?:5<) +@M02542:108:000000000-AJUMM:1:1101:19629:1335 1:N:0:4 +CGCCAGTTAAATAGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAGGACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAAGCTACCAGTTATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGATATGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACAAAGCTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAGAATTAGCCGCAACC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGDGGGEGGGGGGGGGGGFGGGGGGGGFEEGDFGFGGGGGGGGGGGGGGGGGGGGGCGFFGCFGGEFGGGGGFGGFGFFGGGGGGGGGGEGGGCFGGGGGD;;CCCFGGACFGGGGGGGCFDECFCD7DCGC67@EGGGGG7CEFCCFGGGGG96B( +@M02542:108:000000000-AJUMM:1:1101:19011:1335 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGCCAGATCATAAAATGGGGTTTAGTCAAGCAAGCTTGATCTAAGAATTAGAAGCGGATCTAAAAGACTTCTCTTATCTCGGCCATACTTTCGTATGTCCTCGGCGAAATACTTATCACGTCGAGTGGAACCGATTACAAAAAGGATCTGCTAATTCATTTCAAGCGAGCCGGTTAGTGAAAACCAGCAGCGCTCAAGTCCAAGCCTTCAGCCTTAATAAAAAAGTTGAAGCTTGAGAGTTTAATGAC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFEGGG529CAAAA6@FDFBFA9??FFFD<7)::AF(((,-1 +@M02542:108:000000000-AJUMM:1:1101:21687:1336 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATGTCATAAAGTTGTCCACAAGGGACGATTATAAGCAAGAACACTGATATACTTCACGAACACGGCGTAGACAATTATCACACCGAAGAGCGATCCGTAAGATTCACGCTAATATATTTCAGAGGAGTCGACTTGGTAACAAGCCGACACTAACCTCCAAGTCCAAGCCCACCAAATCAACAAAGATTTGAGGGTTGAGAATTCCATGACACTCAACCAGGCATGCTACTCGGAATACCAAGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8FGGGGGFFEGGGGGFC:BEGCEGGGGGFGGG6CFGG=EGGG3CG=5A=CDGFF?F57A7CA6CFGG5FD??=6F@FF9CFGGGDEFGC+4EF8F9B?F9F8AGGCFEFGFDED,CAFFG,DGGGCFFCEEG7@BF,,4,>CCECFE;E1?:CGF+:2*=EFE9CGF++=+075CCEG*0:C+::7A5:C*73597B3)977*2*)1(*795)(07*;E61(8?4@2:09;18?(--/**0*))-))))-. +@M02542:108:000000000-AJUMM:1:1101:20577:1337 1:N:0:4 +AATAAGACGATGAAGAACGTAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGAATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAACATCCTTCAACCTTTCTTGGTTTCTTGACCGGGGAAGGCTTGGACTTTGGGGGTTTTTCATTGCTGGCCTCCCTTTAAGCCAGCTCCTCCTACATGGATTAGTGGGGTCTGCTTTGTCGATCCTTGACGTGATATGATGTTTCTACGTCTTGGGTTTCGCACTGTCGCT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGFGGFGGGFGGGGGFGFFGFGCGGCCEGDGGGGGEGGGEFGGGGG=DCCEFGGEGFGGGFEGGDCCD9FCFFFGGEG9CF3FFCEFGDGG7CFFGGFGG7EFGFFCB**25*/79@=6*9<73(8**0+..64=FF:F2?F0:)4(,.*:3C0(2(.)-41 +@M02542:108:000000000-AJUMM:1:1101:16753:1337 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGCTCAGAGTTCAGAAATTTGTCCGAAGACGGTTGGAAGCGCGGACACTAGAATACCCTCCACAGCAACGCAGATAATTATCACGCTGAAGCGGCTGGTAACGTTCGCACTAATGCATTTCAGAGGAGCCGACTACGAGAGCCGGCACGACCTCCAAGTCCAAGCCTTCGTCAATGAAGCCGAAGGTTGCGAATTCCATGAGACTCAAACAGGCATGCTCCTCGGAATACCAATGAGCGCAAGGTGCGTT ++ +CCCCCGGGFGGFFGGGFGGGGGGGGGGGGEGGGGGGGGGCFGGGFGF:F7**247?FFF4).)7C53)),5;@>>52>;58?FFB?<(2908:0933 +@M02542:108:000000000-AJUMM:1:1101:23088:1338 1:N:0:4 +AACCGCGTGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCTAGTATTCTAGCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCCCTGCTTGGTGTTGGGGCCCTACGGCTGCCGTAGGCCCTGAAAGGAAGTGGCGGGCTCGCTGCAACTCCGAGCGTAGTAATTCATTATCTCGCTAGGGAGGCGCGGCGGGCGCTTGCCGTAAAACCCCCCCTTCCCAAGGTTGACCTCGGATCAGGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGEGGGGGGGGGGGGGGGCEGGGGGGGGGGGGGGGFGGGGGGGGGDGGG?@FCFGEDEDGCE5*0:+*AFGGGGFCGGGD7E6**9>DDE><)/9CDGF)4)5CB)1>@7@::<99D5FF?2307)( +@M02542:108:000000000-AJUMM:1:1101:22508:1339 1:N:0:4 +AACTTGCAGATGAAGAACGTAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCTTAGGGCATGCCTGTTCGAGCGTCATCTAAAACCCTCAAGCACTGCTTGGTGTTGGGCGCCTTGTCCCGCCTCCGGCGCGGACTCGCCTCAAAAGCATTGGCGGCCTGTGTATTGGCTTCGAGCGCAGCAGACTTGCGCCTCGCAGACCTCTCGCGCGGGCGTCCACGAAGATGCACCCCACAAGTTTGACCTCGGAT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGEGGGFGGGGGGGGGGC@EGGGFGGGGGCFCFGDGCGGGE=DFGGFEGEGGDGGDGCEGEGGGGGGG?FFGGGFG?CCFGEGG5CCCFFGGFCGGCC53CCCDCGGGGFGGC7E=GG@GGEFDDGG?..).595.9F3)15*)-31;:>?:>C:=:4>2)4CCCFDC:>FFCCGG?EGFFCG7FE,:,2;86)848FG4C<8A=F:DEFFF*0A*,/:346A8*(.6,3)/79)2*8*)..-))))) +@M02542:108:000000000-AJUMM:1:1101:9189:1340 1:N:0:4 +AACTTGCAGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATCTTGCGCTCCGTGGTATTCCGCGGAGCATGCCTGTTTGAGTGTCACGTAACCATCGCCCCTCAGATTGTTAACGCGGTCTGTCGAGGTGGATTTGGACTGTGCCGTAGTCGGCTCGTCTTGAAATACATTAGCTTGCGCTTTTAGAGTGCCGGGCACCGGTGTGATAATTATCTGCGCCACAGCCTTAGGAACTCTTCAGTGGTGCTGCTTATAGTCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFDFGGGGGEGEGGGGGGGGGGFGEGGGGGGGGGFGGGGGGGEGGGGGG5EFDGCECFFFFF?FGFFF77?CFGFGGGGFGGGCFGGGGECGDEEFE:097;FFC7DFCFFF>FFFF2)3@*786<>9<4651AFFD?FF2<)<):DFFBD?F<>A,CFGF,D,+6DFDG;DFGDGCEFFA:EFGGF@DEAC,@C8>,D;>BC7::C6B?:2CF7,:FF,C,4>F6?,@B335>*2CGGC:DFFCFC)7)>/9)1/*7).<*06064-5F*1)9:21122.(-<507<:93(6)((- +@M02542:108:000000000-AJUMM:1:1101:22568:1342 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAAACTTTGTTTGTTGTTGTAAGGCCGAGCCTGTGTAATAAACAAATACTTTACTGGTCAATGAGTTGGATAAACCTAATACATTGAAAACAGTTCAGCACTATCTAGTACCACTCATGCCAATACATTTCAAGCAAACGCTTAGTCTGACTAAGAGTATCACTCAAAACCAAATCCGAAGATTTGAGAGAGAAATGACGCTCAAACAGGCATGCCCTTTGGAATACCAAAGGGCGCAATGTGCGT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9DFGFDGGFGGGGGGGGCFEGGGCGGGGCDEGEGGGGFGGBFFGFGG7DB?96?8?ADF:5AF83=;A4+4AEEFF3.)=;ADG33;(4)6<>:, +@M02542:108:000000000-AJUMM:1:1101:17876:1342 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTACCTGATTTGAGGTCAAACTTTGGTTTGTTTGTTGTAAGGCCGGGCCTAATAGCAATCACTTCTTCCCACTATCAATCAACGAGTTGGATAAACCTAATACATTGAATAAACAGCTTTCACAAGAATTACTTCCCTTGCCAATACTTTTCAAGCAAACTCAAGCATATAACCCGAGTATCACTCAACACCAAAACTATTGTTTTGAGAGAGAAATGACGCTCAAACAGGCATACCCTGTGGAATAACACAGGGTGCAATG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGEGGGFGGGGGGGG9FEG@:CEDCEGFFFGGGGFGGGGDFDFDFGGGGGFGGGGGGGGGGCF:9F@F?A?9FF8FGGGGEAEFGD88@BDFFGG9FG?EFC9;,3@DFADF9EB,377@C,CFF7CFCCGGGGG5FGC7::9FF6;4)87CFG*8;BA>FFG3>>AAFF6;0@@;FFE*/64;)7;8);:C>51((,(.4>) +@M02542:108:000000000-AJUMM:1:1101:12731:1342 1:N:0:4 +AAGTCCGGGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTTCAACCCTCAAGCCCACCTGCGGTGCTTGGTGTTTGGGTCAGCTACAGGAGGATTTCCCCCTGTAGGCCCTTAAAAGTAGTGGCGGGCTCACCAGGGCTCCGAGCGCAGTAAATCATTTCTCGCTTTGGGTGTCCTAGTGGGTGTATCCAGCCGTCAAAACCCCAACTTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGD@ADGGGGFDFFGGGGGGBFGGGGGGGGGGFGGGGGGGGGGGFGDEGGGGGGGGGGGGGGGGGFGCFGGG9CGGGGGGGGGEGG=FGGGGDD<65CC5?9CC7*:+:?:*6@FFGG:>D)0:*9CB@6)=F*26<167)74=94928?63(75*=7(36(::242 +@M02542:108:000000000-AJUMM:1:1101:22662:1343 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCTTACTTGATCTGAGGTCAAACTTAAAAAAAAGTTGTTTATAACGCAAAATCATCGAAGTCCATGTACTGAGAAGAACAACAATGCACAAATCCAACGGGTTGGGCAACCCATTTAAGATCTAGTCGAATTAGCCTTCAAGCGGAACTCCCAGTTGTCAATGTGATTTCTAATCATGCTCATAAAAGAATTAAACTCGATATTAAAACAAACTCAATGTTCGTACAAATAAAATGAGGTTCAAAGAATTATGCATTCCAGATT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG<D,,C,57,5,55:++3+CDF,3,,3,,,++838,@,,,,3,3,,53,,,,,,7E,,5,?2D:,=E9,,,,+,5*;++,,1<:F*,*4*1,2+=*2)2**00;7++)1)2))(+/+++).))++)(23;1)).44<6FDF*)6))-)58) +@M02542:108:000000000-AJUMM:1:1101:11447:1343 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCTCACCCGATTTGAGGTCAAGGTTTGTTTCGTGGGTCAAGCCTCCCACCGAAAAATCGGCGGCGACCGGAACACCATCGTTGTCAATGAAGACGGTTAGAAGCAGGTGTACAGCGTCAAAAATCCAAGACGTCGAAACAACTTATCACGCCAAGGACCGACAATGCAGACCCCACTAATACGTTGGGGAGGAGCTCGCTTCAAGGCGAAACCAGCAAAAAGGCCTCCAAGTCCAAAATCCTTTCAATGGTCAAAAATGACCA ++ 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+AAGACTCTGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAACTCAGTGAATCATCGAATCTTTGAACGCATCTTGCGCTCCTTGGTATTCCTTGGAGCATGTCTGTTTGAGTGTCATGAAGTTCTCAACCTCCTATGGTTTGCTAGTCAGATCTAGGAAGGCTTGGATCATGGGTGCCTGCTGGAGGCCTTGTGTCATCAGCTCACCCTACATAAATCAGTGGCACCGCTTAGCTTGGTGGCTTCACCTGATGTGATAGACTTATCATCAGGGCTCTTCTTCATTGA ++ +CCCCCGGGGGGGGGGGGGGGEGGGGGFGGFGDGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGCGGGGGGGGGGGFFGGAEFGCGGGGGCGFEFFGGGGFGFGGGGGGGCEFGGFFGFGGGGGGFFGGGFGGGEEGGGAEFGFGDE@FGGGGGGGGGFGFGDCFA@CEFGGGCEFFFGCGEGGGGGGG?EFG6FD@EGCFGGGGDCFECFFEGGG6AD7C+CC9:EC:>GG*9@CDD*=@FCD874DCA)8=*2AF=FF8C<8?4>FC8*+/)93/)2(6>FFFCE3.1>>C37994:5.*-=AAF:0432()1?*:)6AD2:<4) +@M02542:108:000000000-AJUMM:1:1101:12314:1353 1:N:0:4 +CGCAGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACCCTCAAATCTTTGTTGATTTGGTGGGCTTGGACTTGGAGGTTAGTGTCGGCTTGTTACCAAGTCGACTCCTCTGAAATATATTAGCGTGAATCTTACGGATCGCTCTTCGGTGTGATAATTGTCTACGCCGTGTTCGTGAAGTATATCAGTGTTCTTGCTTAT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGG7FGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGFGGFGFGGGGGGGGCGGGGGGGGGGFCFGGGGGG>FEGGD@FGGGGDG56FGGFFGGGGGG76@EFFGF=CAD5>GF@;:C3+D<@,>,D7F7E@BCFFC;D=FD9>EDF?FF85;DF9,?7DFGE5:*,,A:46)- +@M02542:108:000000000-AJUMM:1:1101:21362:1353 1:N:0:4 +AACGCGTTGATGAAGAACGCAGCGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACAATAGTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGAAAAGTATTGGCAAGGGAAGTAATTCTTGTGAAAGCTGTTTATTCAATGTATTAGGTTTATCTAACTCGTTGATTGATAGTGGGAAGAAGTGATTGCTATTAGGCCCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGAFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDFGFGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCG9EGGGCDFFGA8+B?EFFGGGGGGGGGFGGCFGGGGGGGGFFCAFFG9EGGGFC7@CEDCGGCFF9:D>D:E<<,@,@CGFFFC,=D>CCBFC;E,:=CFGGFFGFFGGGCFFG+48FFF?F9F5FAF3<5CFFA;4(6(;87)9CFGCF7BB4>D?<<(1((((4 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+AAGGTGCTGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCGTTAGGCCGAGGGCACGCCTGCCTGGGTGTCACGCATCGTTGCCCCCTCCCAAACCCCCCTCTCCTCGAAAGGGGACGAGGGGACTTGGCCGTGGGCGGCTATTGGCCTCCCGTCTGCCGAATGGCTCGCGGTTGGCCTAAATACGAGTCGTCGGCGACGGACGCCGTGTCGTTGGGTGGTCAACGAAACCCCAAGCTGCCGC ++ +-ACCBEDGGFGGCEDECFGGCEGGGGGGGGG7FFGGGFF;CCFGGFFAFEGGGGDEFGGGGGGGFGFGFFFGGGGC,ECFGF+@FF9FCF:FFGGGFF@=:,:F8FGFGGGGEEECGGGG<@EFGGGGE?CGGDGGGGF=****2A@-).3)416652/0*(,40)521( +@M02542:108:000000000-AJUMM:1:1101:18484:1355 1:N:0:4 +AAGACGCAGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACTTCACCAGATTTGTTACGAATCTGTGTAAAGCTTGGATGTGGGAGTTTGTGCAGGAAGCTTTTGCAGCGTACTGCTCTCCTTACATTAATTAGCGAGTTCAAACTGGGCTCCGTCTATTGGTGTGATAATTATCTACGCCGTGGATTGGGCTTAGACTTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDFGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGD@C=FEFGGCFAFFGCGFGFGGGGGDCGFA>F6BFGEE*BFCF7,>=@CCC*:CCFFFFDGGC54?EGGGACFF486FFCDGFF;A71AFFFFCFF36G?:BECGDFGFCFGGGG4D6?BAAFFFEFF+79?CE@FFFFA)5?C<3;(6>FGAF9C*C>3>B:?22: +@M02542:108:000000000-AJUMM:1:1101:9081:1356 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTGCCTGATCTGAGGTCTAAGACACAGATTGGTGACAAATGTCATCAAGAGTTAGAAGCAGCAATTGCATCAGCTGAGGCCCTTCAATGAAGAAGATCCCTGATGATAAGTCTATCACATCAGGTCAAGCCACCAAGCTAAGCGGTGCCACTGATTTATTTAGGGTGAGCTGATGACACAAGGCCTCCAGCAGGCACCCATGATCCAAGCCTTCCTAGATCTGACTAGCAACCCATAGGAGGTTGAGAATTTCATGACACTC ++ +CCCCCCFGGGCFGFGGGGGGGGGGGGGEGCGGFGGGGGFEGGGGGGGGGGGGFGGGGEDFGGFGGGFGGCCF,:FEFFGGGGCFGGG9AFGGDGA@F8FGFG8FGGGGGGG9FFFDFGG7CFGGCGGGF9??BFGGCEDF8FFA?5AEFEGF9FFECCCC9AFGGF9:EFDFGGCFCG9FFDD:=EGCC96>E,,@E=FGGFGCFCBEGGFFFCAF@F6CCFGC>69FG?FD9CFF;CFGG,9=C*;;FD*;*08:8.:41+=681;4,/(/()..4A@8@D83(((12+;:).7)3=F8, 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+TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCACATTAATAAAAATTTGTCCAATTTAATGGACTGTTAGAAGCTGAACTAGCTTCACTGTCAAGAAGCAGCGTAGATAGTTATCACGCAAATGAACAGTGAACAGGTTGTTCCGCTAATGCATTTCAGGTGAGCTGACCGTGAAGCCAGCAAAGAAGGAACTCCCACATCCAACACTCAACACAAGTCGAGGAGGTCGATCGATTAATGACACTCAAACAAGCATCCTCCTGGGAATACTAAGG ++ +CCC36@,4423@AF>D,;A77***2,11;C*4;,,+**))87***))1))/.88:+/;*290/3;)*2)/.().(/7(.)9**)*.64)))( +@M02542:108:000000000-AJUMM:1:1101:16341:1357 1:N:0:4 +AAGACGCAGATGAAGAACGCAGTAAAATGCGATAAGTAATATGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCAGAGGGCATGCCTGTTTGAGCGTCATTTCTCTCTCAAGCCCTCGGGTTTGGTATTGAGTGATACTCTTAGTCAGACTAGGCGTTTGCTTGAAAAGTATCGGCATGAGTAGTACTAGATAGTGCTTTCAGGATATTTCAATGTATTAGGTTTATCCAACTCGTTGAGAATTCTTGGTAGTGACTTTTTAGTATCATGGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGFGGGGGGGGGGGCGGGGGGCFGFGFGGGDGGC7CFGGGGGGGFGGGGGGGGGGGGGGCDGGGFGCC8FGGCCEF69EFGDGGG5EEGFGGGGFFGGGFGGFGFGGGGG7FG7CGGGGG,,1,=BF+1B@CFDFGCFA8+92;=78AD:F0?);CAFEFF?9EF5)77AFFFFE@DFGGGG?CFFGGGGG5EF7:B:CBF;EGG68FG9CCFG+*25?D71CGGFDC=DEE5**=*<5AFCF+@C7*9<@=794:B777E?6::)8>68)8DGFD>0,7-(.43 +@M02542:108:000000000-AJUMM:1:1101:22599:1357 1:N:0:4 +AATAAGACGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGAATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAACATCCTTCAACCTTTCTTGGTTTCTTGACCGGGGAAGGCTTGGACTTTGGGGGTTTTTCATTGCTGGCCTCCCTTGAAGCCAGCTCCTCCTAAATGGATTAGTGGGGTCTGCTTTGCCGATCCTTGACGTGATAAGATGTTTCTACGTCTTGGGTTTCGCACTGTCGCT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGADFGGGFGFGGGGGG7EFGFGF5EEFGFGG?FFDDDDCDF=4?:DFF(79>?CAD(443>9?B0 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+AAGTGGTTGATGAAGAACGCAGTAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGGACGCACCTTGCACTCCTTGGGTATTCCGAGGAGTATGCCTGTTTGAGTGTCATTAATATTCTCAAAAACCTAACTGTGTGGTTAGGCTTTTTGGATGTGAGGGGTTTTGCTGGCTTTATCAAGCCGACTCCCTTTAAATGAATTAGTGGTTGCTTCATTCACTAGAGTGTGATAGTATATCTACGCTTGTTACAGTGAACTGATATAGATCATCTGCTTTCCA ++ +88CDFE;F9E;CFD9::CGGGGGGGGC:5>BFDEGDC;FFFGGCFGF?>EF5*/=C?CCFD7C**C5:=5*;C45)*;@7D++**.@BD=F47=74C?F?7FFF>?)-.4700:<:F77)--((..414 +@M02542:108:000000000-AJUMM:1:1101:15108:1358 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTACCTGATTTGAGGTCAAACTTTGTGGAAAGTTTGTTAGGCAGAGCCGGACGTTCCTGGGTGTTTCCATGTCAATCAACGAGTTGGATGAACCTAATACATTGAATAAACTGGGCAAACCACAAAAACAGCTCGTGCCGATTCATTTCAAGCGAACTTCACTGAAGAAGTACCGCCCATCACCAAAACCCGAGGGTTTGAGAGGGAAATGACGCTCAAACAGTCATGCCCTCTGTAATACCAGAGGTCGCAATGTGCGTTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGG9FGGGGGGGGGGGGFGGGGFGEFGGGEGGGGGGGGGGGFEFGGFEGGGGGGGGGGD@FCFFGGGGGGGGGGCEGGBFGGCC45CD3*7C/*/55)*12*/7CF?=FGFF*/15)846D.)(*1:*+))-3)7<1?2AB<,(2(-5*CF*.8?:B0E5>GEEBF3DF5348?FF>?E:AA<0:9?BEFGBGA*:FFFDCFGGGF)-??FF4>FB87F)<436F+9+)/).))((/:DCFGC?3CFE9), +@M02542:108:000000000-AJUMM:1:1101:18543:1359 1:N:0:4 +AAGACGCAGATGAAGAACGTAGCAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGGAATTCTCAACCCTCAAATCTTTGTTGATTTGGTGGGCTTGGACTTGGAGGTTAGTGTCGGCTTGTTACCAAGTCGACTCCTCTGAAATATATTAGCGTGAATCTTACGGATCGCTCTTCGGTGTGATAATTGTCTACGCCGTGTTCGTGAAGTATATCAGTGTTCTTGCT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGFGGFGGGGGGGGGGGGGGGFGGGGGGCEFGGGGFDGGG?FGGCEG5D9DEGAF?@9FFFGCFG4DE>*BEFG9CC55CGEDGAF:+7>95D>FCAAFA7CFFG6CB((()056:<:(3:>A<)10*8CBFFBAA:24 +@M02542:108:000000000-AJUMM:1:1101:19400:1359 1:N:0:4 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+TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAATTGTCAAAGTGTATGCGCATCTAAAGAGACACAGCAGATTAGAAGCCGGCAGGCACAGGCACCGAGGCGGTCACAACGGCGATGAAGTTAGACTATCACAACGTGAACCGTCGGGCAACTAAAGTGACCGAGCTAATGCATTCCAGGAGAGCCGAACTCCACAATGCAGCGTACCAGCAAGCTCCCAAATCCAAGCCACGTCCGATTCAAAACCAAACTGGAGTGAGTATCACAACACACTC ++ +CCCCCGGGGGFFGGGFGGEGG9FGFEFGFDEFGGGGGGGGGGGGG9FFFFGGGDGGGG9,EFFDFC@CFGFGDFFDGGGFFFGD@EFFFFF87+@FCCFF,EFGCAFAFA++?+?+*38*85C5CEG*+<+*<7*+22+*)2:9:9<<*9:*F5)*(4(.(.3))**2/2)(,408(( +@M02542:108:000000000-AJUMM:1:1101:14519:1362 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATGTCATAAAGTTGTCCACAAGAGACGATTATAAGCAAGAACACTGATATACTTCACGAACACGGCGTAGACAATTATCACACCGAAGAGCGATCCGTAAGATTCACGCTAATATATTTCAGAGGAGTCGACTTGGTAACAAGCCGACACCAACCTCCAAGTCCAAGCCCACCAACTCAACAAAGATTTGAAGGTTGAGAATTCCATGACACTTAAACAGTCATGCTCACAGGAACACACAGG ++ +CCCCCGEECBBEAEFFFGDFBFE7>CEGGGGGFCCFDGBFEFCGGFGGFGGGGGFGGGDAFGGGFFGCEGGF=FFFGFCEEFGDE>*>*>D*1,=FG?C*77)<.)).9@*..)).--)))./**09:(43((,(( 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+CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEEGGGGGGGGGGGGGGGCGGDGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGDGGGGGGGGFGFFGGG=DFGFGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGDGGGGGGGGGDE:EEEGGGGGCFE*;C5/:ACFGEGEGC:CGGG5:>CFG5*=C?CCFF>7?FCCFCFE>CD)737957;E57@@F::D3:93>F+6CGGGGGFC?@<58*5/0AC9CGGCCECD5/>7C:DF>EF5))1>)7>6)64:?744)-48()-44)0><)7,((,4((.. +@M02542:108:000000000-AJUMM:1:1101:17647:1365 1:N:0:4 +AAGGTGCTGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCTCTTTGGTATTCCGAAGAGCATGCTTGTTTGAGTATCAGTAAACACCTCAACCTCCTCTTGTTTTTTCAAAAGGAGGGTGGACTTGAGCTATCCCAACAACCTTCACCGGTAGGCGGGCGGCTTGAAATGCAGGTGCAGCTGGACTTTTATCTGAGCTAAAAGCATATCTATTTAGTCCTCGTCAAACAGGATTATTACTATTGCTGCAGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFFGGGGGGFGGGGGGGEECGGGCCEEGGGGGFG9CFGGGGC6CF7?FFGDFDFFGGGGGFGFF?CC>C7FF?=2=BCF?BF4>FC>A13>FBA?BBF:7AF<4@CCFGF):94704, +@M02542:108:000000000-AJUMM:1:1101:15350:1365 1:N:0:4 +CATAAGCAGCTTGCAGACCCATAATGTCAATAGATGTGGTAGAAGTCGTCATTTGGCGAGAAAGCTCAGTCTCAGGAGGAAGCGGAGCAGTCCAAATGTTTCTGAGATGGCAGCAACGGAAACCATAACGAGCATCATCTTGATTAAGCTCATTAGGGTTAGCCTCGGTACGGTCAGGCATCCACGGCGCTTTATAATAGTTGTTATAGATATTCTAATAACCCTGAAACAAAAGACCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGATATCGTATGCCGTATTCTGCTTGCACAAA ++ +CCCCCE9FGAGCFCEFFGCCFA<-;CCECAC+>AFDEFF@EFFFAFFFCEC9?F<9==8FDFAA,F:+,@CFGC:D8>BDCG8=CEGGGD@@F,3;<,@>:FD2:;EGGG9DCC,=D7:@B38C>20(09:.((-8(9:7**-5(.))(. +@M02542:108:000000000-AJUMM:1:1101:21070:1366 1:N:0:4 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+AACTCGCTGATGAAGAACGCAGTGAAATGCGATAAGTAATATGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAGAGGGCATGCCTGTTTGAGCGTCATTTCTCTCTCAAGCCCTCGGGTTTGGTATTGAGTGATACTCTTAGTCAGACTAGGCGTTTGCTTGAAAAGTATCGGCATGAGTAGTACTAGATAGTGCTTTCAGGATATTTCAATGTATTAGGTTTATCCAACTCGTTGAGAATTCTTGGTAGTGAATTTTTAGTATCATGGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGG7FGGGCFGG?:CGF46BFCCCCFCFCFFGC*7DCFGG8*=CF1=5D5)2=A=D35CEFF>*:C*7=F94BG35?4)45C2)4567<>FBA>9:.6::37D=FFFF2)((3, +@M02542:108:000000000-AJUMM:1:1101:21840:1369 1:N:0:4 +AAGGTCTAGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCGTGGCTTTCCACGGGGCACGCCCGTTCGAGTGTCACGTTAACCCTCGCCAACGACGTAGCGATACGCCGGGAAGCGGATTTGGACGTTGCCGGTCGTGAGATCGGCTCGTCTCGAAATGCATTAGCGAAGTGCGAAGCACGCGCGACGTTGATAATTGTCTACGCCTCGCGGACTTTGTTCCTCGCTTCTAATCGTCGCCAGACAATT ++ 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+CCCCCFGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGFGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGFGGGGGGGGGGGGGGGGGGEFGGFGGCFEGGGGGGGGGGFGGGG@,AEEFFFGGDF@9AFFGGGGGEGEFDEGGGGGGGFFGDGCFGEGGGGGGGGGFFAEE7=BD@EFCEG@CGGGFFF,>:8BCEEDGCFGFCF>EFFGGGGFGGGGGGFED=@FFGGGGGGGGGGECFFDGCFGGG9FFFCGGGGGG9>>8DEGFF?9EFFFCCGFFFECFCGG7:C6C:C8F8=F8;,0?ECFFFCGEFFGFGGAFGFGFFGC))(2=FA@6AFGFC3)4/9?F)06A>DD1.2(7::7*5)041110 +@M02542:108:000000000-AJUMM:1:1101:9202:1372 1:N:0:4 +AACCAACTGATGAAGAACGTAGCAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTTGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGCCCTCCCTCTGCGGGGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACACTCGCACCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCAAACGTTCCGA ++ +CCCCCFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGFF@FGGGGGDGGGGDGGGGGGGGGGGEGGGGGEGGDF?FGGGGGGGGGGGGGGGFEG8FF8DF7F+=BCEGGGGGGGGEGGCEGGGGGFDGGCEGFGECFFCFE8CED888?8CCGGCC*;CECCFFC5EGGGECFEE5EEGGFGGDFCGGGDGGGDGFE?C?DCFFD7CGB>@BGF5(,41;7)8F?>FF(4579FCEFCGGGGGDFGGGGDGGFF=:B><28,?9CGGF1BF7C??EGGGFFCC;9C7:C=DCC**:=DBGCBBF;DDG=F4=)*.07>:*/9:0))54=4@789446).)4:)1*0*)6A<))..( +@M02542:108:000000000-AJUMM:1:1101:10964:1372 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTGCCTGATCTGAGGTCAAAGCGTTGATAACGATCACAAAGAGCTTTCGGGCAAGACCTAGATCACCATAATCCCCGTTCCGTAGCTGATCGATATGTTACTATCAAGCCAGGTTCAAGGTGGGCTAGTAAAGATCACCACTTGTAGAAAGCCTAAAAAACTTATAAAGCAATCCGAAACAACTCCGCCAAGTGCTCACCAACCAAACCTAGTTAAGCCGCGAGGGCAAGAACTACCCCCCAAAGTGTAGGGACTGAGAGGT ++ +CCCCCGGG@@BFG9+7+BDFGCFCG93D=8D9D=BFF3@C=,,DD7:,@>@8*3<45@=CAAFE,338CECE71,*4;E**:E,;77,+4;,*4(,<*/.37>>>?0:)))10:5*-1,))))(. +@M02542:108:000000000-AJUMM:1:1101:20014:1373 1:N:0:4 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+CCCCCFFGGGGGGGGGGGGGGGGGGGGGGGFDGEFGGGGGGGGGGGGGGFGGGGGGGGGFGGFGGGFGGGGGDGGGCCFGFFFFFG+@:FFGGFFFG@FFGDCFGGGGFFGGGGGDGGGGGGF?EEGGGEGGGGGGCGG6*AA:>CFGGECFGGCFFFCFGGGGGGD=8:FGCFFGGFFEC*9*:DEC8C6CGCFCCBDD:597DDC7775876FFF,780.+62A> +@M02542:108:000000000-AJUMM:1:1101:15825:1376 1:N:0:4 +AACCAACTGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGTTAATATCAACTCTGATGGTTTTTGTTAACCATTGGATGTTGGACTTGGAGGTTCGTGCTGGCTGCAAAGTCGGCTCCTCTTGAATGCATTAGCTTGGACCTGTGCGCGTTTGCTAGCGGTGTAATCCATTTTATTCACACCGGGCCGTGTCACTATTAGGGTCTGCTTT ++ +CCCCCGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGFGGGGGFGGGGGGGGGGGGGGFGGGGGGGCFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGDFGFEGFGDGGGGGGGGGGGFFGGFD767)36CAFCFF>755(7>*8))*)*)1-((()).3)(.)6.6().1*055(5)).: +@M02542:108:000000000-AJUMM:1:1101:16402:1376 1:N:0:4 +AAGACTCTGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTCTGGTATTCCGGAGAGCACGCCCGTTTGCGTGTCATGGTATTCTCAACCTCTAGTAACTTTTTTGTTACTAAAGGCTTGGACTTGGAGGTGGTGCTGGCTTTCTTGCTAAGTCGGCTCCTCTTAACTGCATTAGCGTACATGTTTCGCTCGCTATCCGTGTGATAATTATCTGCGCTGTTAGTTAGATTGAAGTTACAAGTGTTGCGC ++ +CCBCCCGGGFGGCGG9FDBG8FFGFFCFCFFEACEGFFEGFGGGGEDEFEFAFFFGFFAF7CAFCFCE,AB,DD=>CFG=@,@,3@C+@B>A@9:3,@:5,E>EGFC?CG>EGF>*4@A9;;,=?FC79C<>41*3*BFCCDFG*46):877);@GAF6A+;)*.:?2=**-0)6<)43-4<*2:7*4<9<26)4( +@M02542:108:000000000-AJUMM:1:1101:17395:1377 1:N:0:4 +AAGCCTTGGTGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATTTTCGTGAATCATCGAATCTTTTAACGCACATTGCGCCCTTTGGTATTCCAGAGGGCATTCCTGTTTGAGCGTCCTTTCTCTCTCAAGCCCTCGGGTTTGGTATTGAGCGATACTCTTAGTCAGACTCGGCGTTTGCTTGAAAAGTATCGGCATGAGTAGTACTATATAGTGCTTTCTGTATATTTCAATGTATTAGGTTTTTCCAACTCTTTCTGAATTTTTGGTCGTGAATTTTTAGTATCATGGCT ++ +CCCCCGGFGGGEGGGGGGGGGGGGDGGGGGE@@BEFDGGGF9AFGGDFECFCFFGGEEF?FGGACED+@;DFFGGG9D;E>>,8:B+>BEFCFGGCFF,,@335*>CCCDF:BF9D:CFG9>C,CFCFFFFG,=+4CFGGGG:,4+=:CFC7+3CC*88/6+6<=+9;1++2)7)/3+)(;)(-(2(5<9/C9?:)66.6))33 +@M02542:108:000000000-AJUMM:1:1101:15254:1377 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCACATTAATAAAAATTTGTCCAATTTAATGGACTGTTAGAAGCTGAACTTGCTTCACTGTCAACAAGCAGCGTAGATAGTTATCACGCCAATGAACAGTGAACAGGTTGTTCCGCTAATGCATTTCAGGGGAGCTGACCGTGAAGCCAGCAAAGAAGGAACCCCCACATCCAACACTCAACACAAGTTGAGGAGGTTGATATATTAATGACACTCAAACAGGCATGCCACTCGGAATACCAAGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGFGGGGFFFGGGGGGGGGGGGGGGGGGGGG9DGGGGDGGGGGGGGGGGGGFGGGGGGGGFGGGGGEGGGGFGF6DGGGGGGGGGGEFE<>FFCA68DC4*;FFFCCFCFFFFFG47@@@EF4)(.3=@)))748F9D:*,..4>(, +@M02542:108:000000000-AJUMM:1:1101:15101:1377 1:N:0:4 +AACTTGCAGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAACTCAGTGAATCATCGAATCTTTGAACGCATCTTGCGCTCCTTGGTATTCCTTGGAGCATGTCTGTTTGAGTGTCATGAAATTCTCAACCTCCTATGGTTTGCTAGTCAGATCTAGGAAGGCTTGGATCATGGGTGCCTGCTGGAGGCCTTGTGTCATCAGCTCACCCTAAATAAATCAGTGGCACCGCTTAGCGTGGTGGCTTGACCTGATGTGATAGACTTATCATCAGGGATCTTCTTCATTGA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGEGGGGGGGGGGGGGGGFGGGGGGGGGGGGGFGGGDGGGGGGGGFGGGGG9EGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGFGGGGGGGGGGGGGGGGC8DGGGGGGGGGGGGFFGGGGG6EGDFGGGGGC8CGGGDGGGFGGFFGGGGGGGFFFFFGFFFFFGFGEFFFFAFFFEF3?@801@FGFFGE37)7?C +@M02542:108:000000000-AJUMM:1:1101:17967:1377 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAAATTGTCAAAGATTGTCCTTAACGGACGGTTAGAAGCAAGTCTAAGCCCAATCCACGGCGTAGATAATTATCACACCAATAGACGGAGCCCAGTTTGAACTCGCTAATTAATTTAAGGAGAGCAGTACGCTGCAAAAGCTTCCTGCACACACTCCCACATCCAAGCTTTACACAGATTCGTAACAAATCTGGTGAAGTTGAGAATTTAATGACACTCAAACAGGCATGCTCCTCGGAATACCA ++ +CCCCCGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFG?FFEGGGGGGGGFGGGGFGFFGGGGGGGGCEGGGGGGGGGGGGGFGGGGGGGGGCCFFGGGEGGGGCFGFFGGGFFGGDEEFFGGCF?F>GEGGGFGFGFFCFFDF@EGGGGGGGFGGGGGGGGGGGGGGGGGGEEDGFGDG,ECFEFGGGGC,6CDFFGEFG66) +@M02542:108:000000000-AJUMM:1:1101:20915:1377 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACTTGATAATAATAATAGGTTTAAGTTGGCTAGAAAACCCGCCAGATGTCCCCTGAGCGAGATTGGTTACTGCGCTCGGGTTTCCGACTGGGCCCGCCATTGATCTTAAGGGCCTACAGGGTACAGTAGGAAATCCTACCGCCTATAGAAGAGCCCCAACGCCCGACACTAAAGTGCCAGAGTGGTGAAATGACGCTCGAACAGGCATGCCCGCTAGAATACTAGCGGGCGCAATGTGCGTTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGDGGGGGGGDGGGGGGGFEDGGGGGGFGGGGGGFFGGGGGGGGGGGGGGGGGGGFCFFGGGGGGGGGGDGFGGFFGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGF=6BB7CD39C<@B607C?F:>B;)*84?AF)489;9>BGD>9,-).283( +@M02542:108:000000000-AJUMM:1:1101:18638:1377 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATGTCATATAAGTAAAAACTAGCTGTCCAACTGAAGGACGGTTAGAAGCGCAAGCTTCTGTCACTTCACGACTACGGCGCAGATAATTATCACACCGAAGCGATCCGTTACACTCACGCTAATGCATTTAAGAGGAGCTGACTATGCGAGTAGCCAGCACAACCTCCAAGTCCAAGCCTCCGATAACAAAAAAGCTATGAAGGTTGAGAATACCATGACACTCAAACAGGCATGCTCCCCGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCCGGGGGGGGGGGCFGGDFGGGGGGGGGGGFGFFGGGEGGGGGGGFGFGDG7EGGFGGGGGGGGGGGGGGGGGGGGGGFCCFFGGCFCGGD9EFGFGGGGGGDG7F4CFGGCFF=B>@BC9=::?FF?>A??F4777,43:?BDF7)7<69:2)42?99 +@M02542:108:000000000-AJUMM:1:1101:15624:1378 1:N:0:4 +AAGACACCGATGAAGAACGTAGCAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTGTTCCGAGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCAATGCTTGGTGTTGGGCCCCGCCGCTCACCCGGCGGGCTCTAAAATCAGTGGCGGTGCCGTCGGGCTCTGAGCGTAGTAATTCTTCTCGCTGCAGGGTCCCGGTGGATGCTGGCCAACAAACCCCAATTTTCTATGGTTGACCTCGGATCAGGTAGGG ++ +CCCCCCGGGCGCFFCFGEECFGGGGFFFGGE>FGFFGGFF@FGGGGGFCCEFDECB7BFFAGGGFGGGGD@CF:FA?FGCF7CFGGGEFGFGDDEGGGGGGGFG@D7+CFEFGED@CDGFEDGGDEGGGGGGGGGCGGGGGGGGEGGFGG58:CC5@8F7CFC?E=;CCGG9+7CFF:51;)3CFFGF7F6586>*).(.8DEG?:BD=9?:0),)9C75D6()34CGFFCFGF,:DF6C4AFG+BFGGEAE68@4;?F@+;FE887A)7)74?3 +@M02542:108:000000000-AJUMM:1:1101:21029:1378 1:N:0:4 +AACCAACTGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTACTGCCCTCAAGCCCGGCTTGTGTGTTGGGCGCCGCCCCCCCGGGGGCGGGCCCGAAAGGCAGCGGCGGCACCGCGTCCGGTCCTCGAGCGTATGGGGCTTTGTCACCCGCCCGTAGGCCCGGCCGGCGCCCGCCGTCCCCCTCCCACCTTTTTCTTTCAGGTTGACCCCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGFGGGGFGGFGGGGGGGGGFGGGGGGGFFFGGGGGGGGGGGGGGE@FGGGGGAGGGDEE@:CGDEGGGGGGGGGGGGGGGGGGGGFFGGGFFFGCFGGGG7BB7E*/?*)6:7C;33C=9=3((.281)5281:?)()8CC.5:0:((--, +@M02542:108:000000000-AJUMM:1:1101:18096:1378 1:N:0:4 +AACGCCACGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGGTTTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTCTGGTATTCCGGAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAACCTTGTGTTTGGTATTGAGTGATACTCTACTTGTGTTAACTTGAAATACGGTTTTGGCAAGGGTGTGTTAAACAGCCGTCGTCCTCGATAATGTATTAGGTTCTACCAACTCGTTATAGTGGAAGGCAGTGTTGTCTAGCATGTAAGCTCGGCCTAACA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGFGGGGGGGGGGGGGGCCFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGECECEGGGEGGGGGGGGGFGGGFDGGFGGFFDGDFGGGFFFFFGFF@F;CFD6:749FFF46<CGEDFFFFCCFG,,,6???:>89C>8EGGGCFFCC9@?<:79E7=<@:FCE:**/@CDF=FGG))9**1)095B)8FB>B0<2)66@=47(((.42((-<3*)942)())--( +@M02542:108:000000000-AJUMM:1:1101:12736:1379 1:N:0:4 +AAGACAGAGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCGTGTAATTCTCAATCCCGTTTGGTTTTGAATCAGACGTGGCTTGGATTTGGGAGCTTGCTGGTACCCTGCATTGTGGGGTTCGGCTCTCCTTGAATGCATTAGCTCGGTCACGTTAGTTGCCCGACGGTTCACGGTGTGATAGTCTAACTTCATCGCCGTTGTGACCGCCTCGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGDDGGGGGGGGFDGFGCFD,DEGFGGGGGGFGGGEEGGDFGFFEFF;EFDFFGGGGGGGCA9FGFDGGGGCD588BEG5CEGGGFFFGF:FFFGFGGGFGE<5D6*=CCE@@CFF>7=95:))197;*69>9(-(-( +@M02542:108:000000000-AJUMM:1:1101:9180:1379 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCCTGCCTGATCTGAGGTCTAATCTTAAAGATGACTAGATGGGTTTGAAGCTTCTAACTTTTCATGTCTCGGCCACTCTGAAAAAGTGTCCTCAGCGAATAGTCTATTACGCTGAGTCAATCCGATTACGAAATTGAGATGCTAATGTATTACGAGCGAGCTAATTACATAGCAGCGTTCAAAATCCAAACACCACAGCAGTTCAACCAGGAACCGGTGGGTTGAAGAGTTCATGACACTCAAACAGGAATGATCGCCGGAAT ++ +CCCCCGGGGGGGGGGGGGGGFGGGGFFGGGGGGGGGGGGCFGFFFGGG@FFFDDGGGGGGGGGGGGGAFGGGFGFGFFGFE@EGFGAEFGGFFGGGGGGGGGCFFFFC@CFFGDF9FEDFFGGGG,AFC>EFGFBCCCGF*7/8C<07758:)(25:AF>@F>++)6<<9*)5;<:A)83:(46C0=:(--341(, +@M02542:108:000000000-AJUMM:1:1101:21330:1379 1:N:0:4 +AAGCCTTGGATGAAGAACGCAGTAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGTAATTCTCAACCTATAAGCCTTTGCGGCGTTTGTAGGATGGGACTTGGAGGTTTGTCGTCTTGCGTTGGCTCTTCTCTACAGCATTATGTTGATTTCTTGCGGATTGGCCCGCTGTGTTATTGTTTTTTGCGCCGGTCTCGGGAAGTGTTTGGCGGTGCTGCTACTGTTTC ++ +CCCCCGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG+FGGGGGGGGG,FGGGGGGGGG7FGGGGGGGGGGGGGGGGGGGGGG,E,CF959EF9AFGB4?F,,,44CF,5+@+++63+,,,CF,,+@,6@F,D,83C,F@4@F+3,@,3B***@66,,,,37,<>,,,=,,,2,5,,+=C,,2+B,7*4**424,2/))29A+*;11++3);(0:D@)4)))01)((-7>)./:A1(3)4093):**))),,-))) +@M02542:108:000000000-AJUMM:1:1101:9598:1380 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAAACTTGTTTGTTGTTTTGTAAGGCAAAGCCAAATATACCAAAAATTCACTAATAAGAATTCTCAACGAGTTGGATAAACCTAATACATTGAAAATGTTCCTAAAAGCACTATTCAGTACGACTCATGCCGATACTTTTCAAGCAAACGCCTAGTTCGACTAAGAGTATCACTCAATACCAAACCCGAAGGTTTGAGAGAGAAATGACGCTCAAACAGGCATGCCCTTTGGAATACTAAAGGGCG ++ +CCCCCGGGGEGGGGGGGFFFEGFGGGGGGGGGGGEGGGGGGGGGGGFGGGGGGGGGGCFGGGGGGGGGGGFFGGGGGGFGGFGFFGGGGGGGGGGGFGFGFDGGFFFGDEAFGCGFFGGGGGGGGGGGGFFGGGGGGGGGGGGFFGGFGGGGGGEGGGGGDEFGFGGGGGGGGGGCEDECE?F,=88FEEGGFGGGGGF8FC@686@8+:D>>8,1@E9C99DCGG,@CCF?E5:BECFCEF?FGGFFFCD*>D3CE5CFF>GGGCFF>FFF>@DCC57F75?::FD>FFF@49?(4).)))47<))-(,((3)**/*.,(,(--() +@M02542:108:000000000-AJUMM:1:1101:10784:1381 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGCCAAAGCTTTAAAGTGTATTGTCCGTAAGGACGACTATAAGCAGCACCACTGAAGAGTTCCTAAGGCTGTGGCGCAGATAATTATCACACCGGTGCCCGGCACTCTAAAAGCGCAAGCTAATGTATTTCAAGACGAGCCGACTACGGCACAGTCCAAATCCACCTCGACAGACCGCGTTAACAATCTGAGGGGCGATGGTTACGTGACACTCAAACAGGCATGCTCCGCGGAATACTACGGAGCGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGCFFGGGGGGGFFGGGFFGGGGFFGGGGGDGGGDGGGGGGGEGGEGGGGFGGGGGGGGGGGGGGGFDFGGGGFCFGGGGFGFGGCGGGGCGDGGGGGGGGEGGCGGGGCFGGGFDGFGGGGGG@CCGGFFGGGGGGGGGGGCGGGGGDD5EDEG>E8CEGFGGGGFCCF6EGGFGGGGGGDGCDGGGEEGG?FGGF?*97C>BCCD3>CCF?25)75=0?5DF7.87.3;@(9<981:(7(957C**)44?6919 +@M02542:108:000000000-AJUMM:1:1101:15683:1381 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGCTCAGCGGGTATCCCTACCTGATCCGAGGTCAACCTGATAAAATTTGGGGTTGTTGGCAAGCAACCGACCGGACCCTATAGCGAGGAGTATTACTACGCTTAGAGCCGACCGGCACCGCCACTGATTTTAGAGGCCGCTGGTGGGCGGGCCCCAATACCAAGCTAAGCTTGAGTGGTATAATGACGCTCGAACAGGCATGCCCTCCGGAATACCAGAGGGCGCCATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGCAATTCACATTACTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGG-FGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGFGGGGGGGGDGGGGGEGGGDF8CCB:)77D:CDE:6BFC9??BFDEGAFF>FFFBFFBABAFBF2*2*0:>:5>D2:A> +@M02542:108:000000000-AJUMM:1:1101:22663:1382 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAAACTTTGTTTGTTGTTGTAAGGCCGAGCCTGTGTAATAAACAAATACTTTACTGGTCAATGAGTTGGATAAACCTAATACATTGAAAACAGTTCAGCACTATCTAGTACCACTCATGCCAATACATTTCAAGCAAACGCTTAGTCTGACTAAGAGTATCACTCAAAACCAAATCCGAAGATTTGAGAGAGAAATGACGCTCAAACAGGCATGCCCTTTGGAATACCAAAGGGCGCAATGTGCGT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFFCGGGGGGGGGGGGGGEGGGGGGGGGGGFGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGCGEFGGGGFFDGGGGGGGGGGG@FGGGGGEGFFFAGGEDGBEFGGG:CFFGD?FAFEGGC9FFGGGGGGGCFGGAGGB>FGG8CCGE)6BF76)():CFC;4=(5=6;9><@E4)61;F12<4EFFB244439>DC>C<-((((--1 +@M02542:108:000000000-AJUMM:1:1101:12787:1384 1:N:0:4 +AAGACTCTGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATATTTGAACGCACATTGCGCCCGATGGTACTCCATCGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAGGCCCTCGTCGGCCTGGTGTTGGGACGCCACAGCACGCTGTTCTCCAGCGGCTGCGGGTCCTGGAATACAGTGGCGGAGCGGAGCGAATCCCCGGCGCAGTGACACCCCGTCGCCGCGGGAAGACCTCCGACCCGGCCGCAAAACAACCACCACAGAAAC ++ +CCCCCGGGGFG<@FGDDDCCFGGGEGEGEGGBD;BEFCAE<@3FFACF7B*>C7**=*?E?BF@+=@C+>+9BCFGGGC87?EDGGGCDF0>))873@5C7C>;>(055(<699((4:::FDG>*(4::2:)( +@M02542:108:000000000-AJUMM:1:1101:17293:1385 1:N:0:4 +AAGTTAAGGATGAAGAACGTAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCACTCCTTGGTATTCCGAGGAGTATGCCTGTTTCAGTATCATGAGCACTCTCACACCTAACCTTTGGGTTTATGGCGTGGAATTGGAATGCGCCGACTGTCATGGTTGGCCCTTCTAAAATGTAGTTCTTGGCTGTCACCTAATACAGCAGTTTGGCCTAATAGTTTTGGCATTCATTGTCAAATCTTTGGCTAACATTTGCTCCAGGATTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGGFFFGGCEFGGGGGGGGGGGGGGGGGGGGGGGGGDGCFGGGGFFGFG9>FCEGGFG6EGGCEFGCF9@EGGACADFGG7<:E97DFG+=C,6CC=BCFD;CFFAG7FGGGGFEEFFGFFFF+:+273?EC6A;F3.;E;4?CFFC+=*4(33).5 +@M02542:108:000000000-AJUMM:1:1101:21396:1385 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATCCCTACCTGATCCGAGGTCAACCGTAAAAAATGGGGGGTTCTAGCAGGTAGCCACCGGGACTCTATAGCGAGAGAATTACTACGCTTAGAGCCAGACGGCACCGCCACTGATTTTAAGGGCCGCGAGACCGCGAACCCCAAGACCAAGCCGAGGCTTGAGTGGTTATAATGACGCTCGAACAGGCATGCCCCTCGGAATACCAAGGGGCGCAATGTGCGTTCAAAGATTCGATGATTCACTGAATTCTGCAATTCACATTACTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGDGGGGGGGGGGGCFGGGGGGGGGGGGGGGGGGGGGDFGGGGGGGG>EGGGDEGG?EGCFGCGGGGGGGGGDGGGFGGGCFFGGFGG5CDCE*9CGGGFGF@DGFE<:<26: +@M02542:108:000000000-AJUMM:1:1101:8632:1385 1:N:0:4 +AACTCGCTGATGAAGAACGTAGCAAAATGCGATAAGTAATATGAAATGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAGAGGGCATGCCTGTTTGAGCGTCATTTCTCTCTCAAGCCCTCGGGTTGGGTATTGAGCGATACTCTTAGTCAGACTAGGCGTTTGCTTGAAAAGTATCGGAATGAGTAGTACTAGAAAGTGCTTTCAGGATATTTCAATGTATTAGGTTTATCCAACTCGTTGAGAATTCTTGGTAGTGAATTTTTAGTATAATGGC ++ +CCCCCGCFC@EFE9C9EFFFFFGFDFGGGCGCFGGGGGGGGGCGFFCFFFGGGDE>;E?3,3EFGGFGGFA,**636@<;3>55D7=;D9,50=D9,++EGDGGGGGGGFGGFFGGGGGGGFFF:@CF:?3)>557@9B69>6((,43)008)41126A()6 +@M02542:108:000000000-AJUMM:1:1101:13623:1385 1:N:0:4 +AAGACTCTGATGAAGAACGTAGTAAAATGCGATAAGTAATGTGAATTGCAGAATTCCGCGAATCATCGAATCTTTGAACGCACATTGCGCCCGTTAGTATTCTAGCGGGCATGCCTGTTCGAGCGTCATTTCGACCTTCAAGCCCTTAGGGTTTGGTGCTGGAGCACTACGGCCAACGCCGTAGGCTTCGAAAAGCATTGGCGGGCCTGTTGGATCCCGAGCGTAGTAAATTTTCTCGCTTAGGCGGTACAGCAGTGCACTAGCCACGAAACTACGACGGCCCTTTCGGGCTGTCTCCCCC ++ +CCCCC9CFGF8FFDFGFGEGGGGGFFGGGDFFFCDC7CF+>>C7BBEC*CCFF8:EF@8C,,,216@ECGE**=?9+;8C57>5EC7*>>(4331)))7)71(.)6))(,( +@M02542:108:000000000-AJUMM:1:1101:17867:1385 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCCGCCTGATTCGAGGTCAGATGTAGAAATAGTATTGTCCGAAGACGATTAGAAGCGGTCTTTGAAGACCTTGGCCAGTCCGAAGACTGTCCTCAACGTCAGATAATTATCACGCCGAGTAGAACCAAGACTCACAAAGGCCAGCCAATACATTTAAGACCAGCCACTCGTAAAAGCGGCAGAGTCCAAATCCAAACAGAACATAGCAATAAAGCTATGCTGCTTGAGAGTTTCATGACACTCGAACCGGCCTGCTCACCGG ++ +CCCCCGGGFGCGGFDFFDF,:*3>,?DFE8DFCF*?GECF*1=7<=C:C660<=F65C:F9:+*1:=7C7::7:AFA6+*)+.84*636<2)9**4=3014CEGGGGDCCGEEGGGFGEC***1FCBB*C*=ECCFG5393:4).)-),5/><4>,(-,(-3 +@M02542:108:000000000-AJUMM:1:1101:14371:1386 1:N:0:4 +AACCACTCGATGAAGAACGTAGCGAAATGCGATAAGTATTGTGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCAGAGGGCATGCCTGTTTGAGCGTCCTTTCTCTATCTAACCTTCGGGTTTGGTGTTGAGTGATACTCTTGGTGACAAACTGGGTGTTTACTTGAAAAGAATTGGCGAGGGTTGTTTTTGCTAGTACTGCAGTCCGTTTATTCAATGAATCAGGTTTAAAACCGTGTTGATTGGTGTTTGTTTAGGATGGCTTTACTTC ++ +@CCCCFGGGCFFEFG9FEGGDEFF:FGGFGGCDECEGGGCFEDFCGC;=)/;+39;))20=(7)).6 +@M02542:108:000000000-AJUMM:1:1101:8543:1386 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAATTGTCAAAGTGTATGCGCATCTAAAGAGACACAGCAGATTAGAAGCCGGCAGGCACAGGCACCGAGGCGGTCACAACGGCGATGAAGTTAGACTATCACACCGCGAACCGCCGGGCAACTAACGTGACCGAGATAATGCATTAAAGGAGAGCCGAACCCCACAATGCAGGGTACCACCAAGCACCCAAATCCAAGACACCTCTGATTCAAACTCAAACCGGATTGAGCATTACACGACCACC ++ +CCCCCGGGGGDFGEFGGAFGGGGFGGGGGGGDGG@FFGG,CFFFGG?GDFFFFCFEDGF9EFCFGEGAFGGGFGGDGEFFGCFGCGGGGGGGG,CEFC9FEGFGGCCFE:FE<<9BFCFGFCF:@FFGEEEGDDFCGGG7CFDFFGGGFGDDG,=AAC7><*@FDG*<*=1FGGFG7CFDBF+B<)),)0=?,)(4((3<<03**:=FB?>(-((( +@M02542:108:000000000-AJUMM:1:1101:20027:1387 1:N:0:4 +AATAAGACGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTACTCCGAGGAGCATGCCTGTTTGAGTGTCATTAATATATCAACCTCCTCAACTTGTGTTGAGTGTTGGATGTGGGGGTTCCTTCTTTGCTGGCTTCACGGTCAGCTCCCCTGAAATGCATTAGCGGAACAACCTGTTCACTGTTCATTGGCGTGATAACTATCTACGCTGCTTGTTGACAGTGAAGCAAGTTCAGCTTCTAAC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGDFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGFGCFGGFFGGGFDFFCGFGGGGFFFFGGGGGGGGGFFFGGGGGGGGGGGCFGGGGGGGGGGGGGGCFGGGGGGFGGDDEEFGGGGGGEGG?;@FGEGGEFGGGGEG<7/:FG9CFGGFGGDGFGGAFFGGGGG77FAF6DFFFF>DDC?A?14222722>D>F>><>DAFFF> +@M02542:108:000000000-AJUMM:1:1101:12430:1387 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACATTTCAGAAAGTTGGGTGTTTTACGGACGTGGACGCGCCGCGCTCCCGGTGCGAGTGTGCAAACTACTGCGCAGGAGAGGCTGCGGCGAGACCGCCACTGTATTTCGGGGCCGGCCGGTAGAAGGCCGATCCCCAACGCCGACCCCCCGGAGGGGTTCGAGGGTTGAAATGACGCTCGGACAGGCATGCCCGCCAGGATACTGGCGGGCGTAATGTGCGTTCCATGATTCCACTATTCACTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGFFGGGGGFGDGFGGGGGEGGGEGDGGGGGGEG=FG@C>CCEGGGEFGGGGGGGGGGGGGGGGGGGCEFGGFGGDCGFCGGGGGGGFGFFAFG9FFFGGEGGEGGGGGGGCF7:CCA1CCEGFGGGGGGGGGG8CEGGEE*:>C=;CFG8CDGGFG+A7>CCC==5CCCGD*55@F*<)>CG3791)))96C*??);DBG90:0?/*-0--,,6))-60:*/*)(-6+:EFFGDFFFFFGGGG9FDCEEGG7BGFGGC:<=D<+F:7B@FFCFFDA;,8>DCGDC5@EEGGEFCC>F?E66DFFE69F8*:@E>?(1()/*)9-5<),.8) +@M02542:108:000000000-AJUMM:1:1101:15351:1388 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATCCGAGGTCAACATTTCAGAAAGTTGGGTGTTTAACGGCTGTGGACGCGCCGCGCTCCCGGTGCGAGTGTGCAAACTACTGCGCAGGAGAGGCTGCGGCGAGACCGCCACTGTATTTCGGAGACGGCCCCCGCAGAGGGAGGGCCGATCCCCAACGCCGACCCCCCGGAGGGGTTCGAGGGTTGAAATGACGCTCGGACAGGCATGCCCGCCAGAATACTGGCGGGCGGACTGCGCGTTCAAAGATTCGATGAT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGDGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEEGGDFGGEEGDBECCDGGGGGGG>CFGGG9FFFEGGEGGGGGF77ECEC>EFCE8>ED>EEGGDGGG:EGEEG=>E:E8CE=E*/:/=**9E*7CD**76EC+:F7EC55DE7<)<<<*9>6*))(8.7)..9778FEFGGGE,,,5CC,,BB+8++++:9,<+A<9,=,,5,,,,57F?B=FG>C:,,9,@+++8>++,3@D:>,,,,,,,7@,7,,,36,>,*3361*44*>>CC,,5,,;8,,2,,,*,,4*0<*3*=:*2*/59/***//;7=+++++*0*1.)****0*0**.1**)1)1=6)04-).9))66)).)-).))**2**)))..).(, +@M02542:108:000000000-AJUMM:1:1101:18141:1389 1:N:0:4 +AAGACGCAGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTGTGAATCATCGAATTTTTGAACGCACATTGCACCCTCTGGTATTCCGGGGGGTATTCCTGTTTGAGCGTCAGTTCTCTCTCAAACCTTGTGTTTGGTATTGATCTGGTACAAATTTCTTTGTAAATTGTATGGATCGAAATATATTGGCAAAGACTCGTCTTATTTTGCTACGACAACGTATTAGGTTTTACCAACTCGTTGGAATAAGCAGCAAGACTGTTAGTCTGGCGGTATAATCAAACATT ++ +CCC@B@:EECAFFGGC<@CDEAFGDCCD+@C7@:=E+++CEC*C*GEGCFGGCCFFFFCCFCGGGEAEEFF,=C<8B<,,,:CFGCFGF<>FGDGGGAFCADCFGCC7>D+7F*C@7CD,>,,@DD:@BFGG6E,;EC=,==BFF7C:@?CED:5C0AEE*1/=:*:7)**=>*02C0*297B8294<)*.4?EFGGGGGFGC9CFGFGC5C1*2***1))*/))19D3455773>>D3*))8*5:(4:?F6*(0(,4<2(6>3>*<>*2(-43(1>7 +@M02542:108:000000000-AJUMM:1:1101:16680:1390 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGCCAGATCATAAAAAACTGCCCAAGGGCGATTAGAAGCTGACAACTATGCCTTTCTTATCCCGGCCAGCCGCATTGCTGCAACTGTCCTCAACGAAATCCTTATCACGTTGAGTGGAACCGATTACGAAAAGGGTCTGCTAATGCATTTCGAGCGAGCCGCAACAACGCAGCAGCGCTCACGTCCACGCCGCTAGCCACGATTAAGAAAGCTACAGGGTGAGAGCATCATGACCCGCAAACACGACTC ++ +C@CC<,@@FB@F@FFGGDDDFFCE8BC+3>5*@8CCGFFG;,3=B,?,D?BFF>C**4*:CC*==EF5**)=CF6CD5:7*:;9:*5C55C>CD)7DGGD)/*)06BF:5;0*9**+(-.->)*,)))5)--).()))011:?(:((4( +@M02542:108:000000000-AJUMM:1:1101:9798:1390 1:N:0:4 +AACGCGTTGATGAAGAACGTAGCAAAATGCGATAAGTAATGCGAATTGCAGAATTCCGCGAGTCATCGAATCTTTGAACGCACATTGCGCCTGCCAGTATTCTGGCAGGCATGCCTGTCCGAGCGTCATTACACCCCTCAGCGCGCCTCCGCGCTGGTGTTGGGGACCTCCCGCGCCCTCCCGGGCGGGGAGCCCCCTAAAGCGAGTGGCGGGCCTTCTGGGATTGGCTCCGAGCGCAGTAGAAACACCACGTTTATGCGACCGCTCGGGACCCCCGGCGAGGCACTGCCGTCAATACGC ++ +CCCCCEFGGGGGEDFAFFFGD@FGGGGGGGGCDFFGGFFC>FGFGGGGGF?CFCFFGDG9FFGE=E7DF,,BFFEFFFEGDDEGGEFFEFEA4=F76FF::FG=+>@FEGGGGGAEFEGGGD@::FE7*>EC7:CGC*6<:7C*EEED@EGGGFC:C>2C:EF>E>58::7?FGGGFF<66**02*12*953/>9?CF*>?FC*9C9DCF/49.550277<5EF048>))(.(4(70,-316*9)/(,().44< +@M02542:108:000000000-AJUMM:1:1101:22167:1390 1:N:0:4 +AAGACAGAGATGAAGAACGTAGTAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCGTGTAATTCTCAATCCCGTTTGGCTTTGAATCAGACGTGGCTTGGATTTGGGAGCTTGCTGGTACCCTGCATTGTGGGGTGCGGCTCTCCTTGACTGCATTAGCTCGGTCACGTTAGTTGCCCGACGGTCCACGGTGTGATAGTCTAACTTCATCGCCGTTTCGACCGCCTCGG ++ +CC9ACGGFEFDFCGGG<<@FFDFFCFECF,,,6,@,DFF9,5C@8@*@BCEEG?C79;7,,527,B7+18+4789:*<=C*7;:+++;*:53)80)-7*7)7(FFCFFEGDFEGGG5B:BECEGGEGGGGFDFFCGGGGC?77DGGGG5EEGFGGDEC*6044=<376:@<7>>((4)5<8>:6AA<(4<>*2/.>?F))6:32) +@M02542:108:000000000-AJUMM:1:1101:13753:1392 1:N:0:4 +AACTTGCAGATGAAGAACGCAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCCGTTTGAGTGTCATTGTATTCTCAAATCCCTTCATTTTTGTGAAGTGGGTATTGGATTTGGAGGTCTTTGCGGGTTTCATTGTAAATCTGCTCCTCTTGAATACATTAGCTGGGAACCTTTTGTTAGGCTGGCTTCAGTGTGATAATTGTCTGCGCTGTAGTCGTCTAGAACTCGTATAAAGGATT ++ +CCCCCGGGGGGGGFGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGFGFGGGGGGGGGGGGEGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFG9DFFGGGFGGGGFGGGDFDGGGGGGAFFGGGCEGEFFDCGFGDDEFGGGGC?:EGGC,2,7,EFCGC9A9D7FD57,:FFCGGG4*A?>BGGGGGGGF6?FFGFF4=AFF73(.38;FEFFFDF8C)..+@DFG13<<43(34 +@M02542:108:000000000-AJUMM:1:1101:9461:1392 1:N:0:4 +AAGACGCAGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTGTGAATCATCGAATTTTTGAACGCACATTGCACCCTCTGGTATTCCGGGGGGTATTCCTGTTTGAGCGTCAGTTCTCTCTCAAACCTTGTGTTTGGTATTGATCTGGTACAAATTTCTTTGTAAATTGTATGGATTGAAATATATTGGCAAAGACTCGTCTTATTTTGCTACGACAACGTATTAGGTTTTACCAACTCGTTGGAATAAGCAGAAAGACTGTTAGTCTGGCGGTATAACAAAACATT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGDEFGFGEFGGGGGGFFGGGGFGGDGGGGGGGGFEE@@FGGGDGGGGG>FGGGFEGGGGGFFCC>;F>CGFGGGGGGGG9FEGFGFGFFCCFFCGGGGGGGFGFGGGGGGGGGGGGGGGGGGGGBFGGFFF9CE9FGGGGGGGF+CGFFFCGGF6;AEFFGGGCFGFCFCDCF39*75CGFGGFGGGGFBFGFFG49C:DFFFFFFFFF29@<)<,8::49FDFAA54>9BDCBD>FF0:81-. +@M02542:108:000000000-AJUMM:1:1101:17384:1392 1:N:0:4 +AACGCGTTGATGAAGAACGTAGTGAATTGCGATAAGTATTGTGAATTGCAGAATTTCGTGAATCATCGAATCTTTGAACGCACATTGCACCCTGTGGTATTCCACAGGGTATGCCTGTTTGAGCGTCATTTCTCTCTCAAAACAATAGTTTTGGTGTTGAGTGATACTCGGGTTATATGCTTGAGTTTGCTTGAAAAGTATTGGCAAGGGAAGTAATTCTTGTGAAAGCTGTTTATTCAATGTATTAGGTTTATCCAACTCGTTGATTGATAGCGGGAAGAAGTGATTGCTATTAGGCCCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGFGGGGGCFGDGFGGGG@FFEFFG);2;?GFGFFEE=65933;;@4?@?EFG7@@??5CA(3(, +@M02542:108:000000000-AJUMM:1:1101:20427:1392 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATGTCATAAAGTTGTCCACAAGGGACGATTATAAGCAAGAACACTGATATACTTCACGAACACGGCGTAGACAATTATCACACCGAAGAGCGATCCGTAAGATTCACGCTAATATATTTCAGAGGAGTCGACTTGGTAACAAGCCGACACTAACCTCCAAGTCCAAGCCCACCAAATCAACAAAGATTTGAGGGTTGAGAATTCCATGACACTCAAACAGGCATGCTCCTCGCAAGACCAAGG ++ +CCCCCCEDEGGGGGGGGGGGGGGGGE;CFGFFC?,CCCFG;)A4;CCG))359)8CF6>FFDFECE<)/2)(.543:106:35C**2)(208014) +@M02542:108:000000000-AJUMM:1:1101:12317:1393 1:N:0:4 +AACTTGCAGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATCTTGCGCTCCGTGGTATTCCGCGGAGCATGCCTGTTTGAGTGTCACGTAACCATCGCCCCTCAGATTGTTAATGCGGTCTGTCGAGGTGGACTTGGACTGTGCCGTAGTCGGCTCGTCTTGAAATATATTAGCTTGCGCTTTTAGAGTGCCGGGCACCGGTGTGATAATTATCTGCGCCACAGCCTTAGGAACTCTTCAGTGGTGCTGCTTATAGTCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGEGEGGGGGGGGGGGGGGGGGG+2:CFE3C35*=CD;CDF?DG::FFF7=745-26>5)2<)*067.6DA)1;9?2:0 +@M02542:108:000000000-AJUMM:1:1101:19804:1395 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTTCTCCTGCATCGCAGAGGTGGCTGTTTAAATAGAATGGGAGTCATTGAGTAACTTCTTGTTCACATGTGGATGTGAGTTCGAAGTTCCTTTGATGGATAGAGTGAACCATCCAATCAAAAGGACTCCTGATTTCACGCTCGCGTTCATGATTGTGTCGCAAGCGCAGATCCCAATCTCAATCATCCTTTGCACATCGAATGAAATGAAAGAATGATTGGGGATGGTGAGTATGAACAACTACACTCTGCAATACATGGCCGTTTTG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGFGGGGGGGGFGCGGGGGGGDFCFFGGGGFGGGGFFGGGGGFGGGGGGGGGGGGGGGGGGDGEGGGFGGGGG;EGGGGGGGGG>CCEGGGEGGGGGGGGGGGGGGF:=FC6A=AFGAF<<<@FFFFFF)6>CFCECFFFFG7:7;--42( +@M02542:108:000000000-AJUMM:1:1101:13380:1395 1:N:0:4 +AACCGAGGGATGAAGAACGTAGTGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGAAATTCTCAACCTACAAACCTTTGCGGGTTTGTAGCGTTGGATGTTGGAGGCTTTTTGCTGGCCCAGTCAGCTCCTCTTAAATGCGTTAGCTTGGTTCCTTGTGGATCGGCTGTCGGTGTGATAATGTCTACGCCGCGACCGTGAAGCGGTTGGAGAGCTTTTAATGGTCT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEDGFGGGGGGGGGGGGGGFGGGGGGGGGGGFGGGGGGGGGFGGEGGGGGDE>FGGGGFGGGEGGDAFGGGGGGGGGGGGF:DCFGGCD>::EFGGGGGECFFFG?EC@1CEEGGGGFGGFCGFG8@CEFCFCGDFGFF<>A585@++:AF?8@7A86>3C)/414?:3>94< +@M02542:108:000000000-AJUMM:1:1101:16885:1395 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGTCCAAAGCTTTAAAGTGTATTGTCCGTAAGGACGACTATAAGCAGCACCACTGAAGAGTTCCTAAGGCTGTGGCGCAGATAATTATCACACCGGTGCCCGGCACTCTAAAAGCGCAAGCTAATGTATTTCAAGACGAGCCGACTACGGCACAGTCCAAATCCACCCCGACAGACCGCGTTAACAATCTGAGGGGCGATGGTTACGTGACACTCAAACAGGCATGCCCCGCGGAATCCCACGGAGCGC ++ +@CCCCEGDDGGGFGGD,F@CC,6,:FF:@,@FDGAEF88CFCCDGF9FGGGGGCF,CAFFGF89=BBCEGF6<F)(7)(42,-041@**0712001296 +@M02542:108:000000000-AJUMM:1:1101:20344:1395 1:N:0:4 +TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCCTACCTGATTTGAGGTCAGATGTCATAAAGTTGTCCACAAGGGACGATTATAAGCAAGAACACTGATATACTTCACGAACACGGCGTAGACAATTATCACACCGAAGAGCGATCCGTAAGATTCACGCTAATATATTTCAGAGGAGCCGACTTGGTAACAAGCAGACACTAACCTCCAAGTCCAAGCCCACCAAAACAACAAAGATTCGAGGGTTGAGAATTCCATGACACTCAAACAGGCATGCTCCTCGGAATACCAAGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGD9FEEA@CCFFGCE9F@<7FCC=F3DF<<9E=FFFCGGGFGGGFCFGFC;,+@++353**3>DGFFC;<4:2DFFB8ECEFF7:6?,,=EFGGDC7CGGGGGF/CFD5AC5;):D+:DC?FFF?:F*7<)80??B))).009))-2)434)(- +@M02542:108:000000000-AJUMM:1:1101:20551:1396 1:N:0:4 +AAGAATGTGATGAAGAACGTAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCACTAGTATTCTGGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCCCTGTTGCTTAGCGTTAGGAGCCTACCGGAACTCTCTGGTAGCTCCCCAAAGTCAGTGGCGGCGCCGGTTCGCACTCCAGACGTAGTAGCTTTTACACGTCGCCTGTAGCGCGGGCCGGTCCCCTGCCGTAAAACACCCCAATTTTTATAGGTTGAC ++ +CCCCCGGGGGGGFGGGGGGGGGGGGGGGGGGDFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGDGEGGGGGGGGGGGGGGFGDGGGGGGGFGGFFGGGGGGGGGGGGGGGGGGGGGEGAFGGGGGGGGGGFGGGGGE?9AFGGFGGGG>FGGGEGFFGGGGFFF8CC7CFFACFFG7CEE>*:CECEGGGGGGGGGFFFFFDFFB>39D36357>C?:?BE3.(*).8?>F((4**:@*6-)-6<33. +@M02542:108:000000000-AJUMM:1:1101:22847:1396 1:N:0:4 +AACCGCGTGATGAAGAACGCAGCAAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGCATTCCATGGAGCATGCCTGTTTGAGTGTCACGTTAACCCTCATCATTATGATGTCAAAGTCATAATGGTGGATTTGGATTGTGCCGTAGTTGGCTCATCCTGAAATACATTAGCTTGCACTTTTTAGGGTGCTTGGCATGGTGTGATAATTATCTGCGCCATCGCCTTATGCCTCTTCTATGTGTGCTGCTTACAGTCGTCC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGFGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDEEF?FGGGGGGGFF8AFFD9FGGCGGGGCFGGGGGGGCG>DDGGD6CFCCFF:9EGFDGFFGGG=:F>E;@BEGFFFFFGFGEFFFFA857C5)9?8CCE40@FF4E?<7=@F diff --git a/example_files/pxlog_example/run1.trees b/example_files/pxlog_example/run1.trees new file mode 100644 index 0000000..5a89cd5 --- /dev/null +++ b/example_files/pxlog_example/run1.trees @@ -0,0 +1,179 @@ +#NEXUS + +Begin taxa; + Dimensions ntax=33; + Taxlabels + 113_V_gryphus + 128_C_burrovianus + 135_C_aura + 31_C_melambrotus + 6_C_atratus + 97_S_papa + 9_G_californianus + Anas_clypeata + Anas_platyrhunchos + Apterodytes_patagonicus + Ardea_herodias + Asio_otus + Balaeniceps_rex + Bonasa_umbellus + Bucephala_abeola + Caracara_cheriway + Charadrius_alexandrinus + Ciconia_maguari + Ephippiorhynchus_senegalensis + Falco_femoralis + Falco_peregrinus + Falco_rusticolus + Fulmarus_glacialis + Gallus_gallus + Gavia_immer + Gyps_bengalensis + Larus_marinus + Lunda_cirrhata + Nyctanassa_violacea + Pandion + Pygoscelis_antarcticus + Sagittarius + Scopus_umbretta + ; +End; + +Begin trees; + Translate + 1 113_V_gryphus, + 2 128_C_burrovianus, + 3 135_C_aura, + 4 31_C_melambrotus, + 5 6_C_atratus, + 6 97_S_papa, + 7 9_G_californianus, + 8 Anas_clypeata, + 9 Anas_platyrhunchos, + 10 Apterodytes_patagonicus, + 11 Ardea_herodias, + 12 Asio_otus, + 13 Balaeniceps_rex, + 14 Bonasa_umbellus, + 15 Bucephala_abeola, + 16 Caracara_cheriway, + 17 Charadrius_alexandrinus, + 18 Ciconia_maguari, + 19 Ephippiorhynchus_senegalensis, + 20 Falco_femoralis, + 21 Falco_peregrinus, + 22 Falco_rusticolus, + 23 Fulmarus_glacialis, + 24 Gallus_gallus, + 25 Gavia_immer, + 26 Gyps_bengalensis, + 27 Larus_marinus, + 28 Lunda_cirrhata, + 29 Nyctanassa_violacea, + 30 Pandion, + 31 Pygoscelis_antarcticus, + 32 Sagittarius, + 33 Scopus_umbretta + ; +tree STATE_0 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-95143.48101001458,EEF_ucld_branchRates=-266.168517335019,lnP=-95143.48101001458,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=0.02234135338553881]:5.09961E0,9[&rate=0.02837737786871923]:5.09961E0)[&rate=0.08852504376910755]:4.69329E0,15[&rate=0.032172544376755666]:9.7929E0)[&rate=0.09048013234469902]:8.54202E1,(14[&rate=0.035178720277860634]:3.44813E1,24[&rate=0.03776392226896683]:3.44813E1)[&rate=0.09248621721034095]:6.07318E1)[&rate=0.09454809074648765]:1.90448E1,(((((19[&rate=0.040084625791642695]:7.55131E0,18[&rate=0.04222370293714232]:7.55131E0)[&rate=0.0966710180250762]:6.00086E1,((33[&rate=0.0442310403283049]:5.9902553E1,13[&rate=0.046139350448828095]:5.9902553E1)[&rate=0.0988608186246841]:7.11938E0,(11[&rate=0.04797145754430627]:1.4373533E1,29[&rate=0.04974406499292393]:1.4373533E1)[&rate=0.10112396417852913]:5.26484E1)[&rate=0.10346769579051854]:5.37977E-1)[&rate=0.10590016670797511]:1.74225E0,((10[&rate=0.05146987509034866]:1.0828134E1,31[&rate=0.05315886193965773]:1.0828134E1)[&rate=0.10843061735954053]:5.82947E1,23[&rate=0.05481907652257585]:6.9122834E1)[&rate=0.1110695922545826]:1.79326E-1)[&rate=0.11382921159990848]:2.10502E0,((12[&rate=0.05645717809392223]:6.697338E1,(((16[&rate=0.05807879781036426]:1.332987E1,((22[&rate=0.05968879545822361]:1.62809E0,21[&rate=0.06129144582349835]:1.62809E0)[&rate=0.11672351528643168]:1.80365E0,20[&rate=0.06289057748385585]:3.43174E0)[&rate=0.1197689038605611]:9.89813E0)[&rate=0.12298471138435389]:4.98254E1,((30[&rate=0.06448967869610779]:5.12196E1,26[&rate=0.06609198011174378]:5.12196E1)[&rate=0.1263939606029411]:4.75282E0,32[&rate=0.06770052095127599]:5.597242E1)[&rate=0.13002437475881606]:7.18285E0)[&rate=0.13390975820773335]:1.27429E0,((((3[&rate=0.06931820327112426]:7.55302E-1,4[&rate=0.0709478376436605]:7.55302E-1)[&rate=0.13809191947416302]:2.01528E-1,2[&rate=0.07259218269320954]:9.5683E-1)[&rate=0.14262341358753114]:5.45989E0,5[&rate=0.0742539803375295]:6.41672E0)[&rate=0.14757156021233067]:2.27674E0,((6[&rate=0.07593598818215795]:4.627846E0,7[&rate=0.07764101024517056]:4.627846E0)[&rate=0.15302452037296171]:5.82054E-1,1[&rate=0.0793719270149648]:5.2099E0)[&rate=0.1591008371574467]:3.48356E0)[&rate=0.16596510567742037]:5.57361E1)[&rate=0.1738551754505638]:2.54382E0)[&rate=0.18313278812845646]:2.6958E0,25[&rate=0.08113172574000375]:6.966918E1)[&rate=0.19438683381524174]:1.738E0)[&rate=0.20867186822964753]:1.19542E0,(17[&rate=0.08292353180254597]:6.23045E1,(27[&rate=0.08475064203020245]:2.25099E1,28[&rate=0.08661656249982545]:2.25099E1)[&rate=0.22816999477396083]:3.97946E1)[&rate=0.25868525683626453]:1.02981E1)[&rate=0.32857495943199877]:4.16553E1); +tree STATE_10000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-56308.71687692223,EEF_ucld_branchRates=-266.168517335019,lnP=-56308.71687692223,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=0.005534491954394902]:8.596895746744E0,9[&rate=0.006476945420290763]:8.596895746744E0)[&rate=0.006835020901839831]:3.032384263759E0,15[&rate=0.004352794078497458]:1.16292800105E1)[&rate=0.011212711932104791]:6.851096607266E1,(14[&rate=0.007645772656595157]:4.99695012098E1,24[&rate=0.006143348089517109]:4.99695012098E1)[&rate=0.018072692018208193]:3.017074487337E1)[&rate=0.005830274971774973]:1.442027489237E1,(((((16[&rate=0.002928032017243164]:4.210807596442E1,((22[&rate=0.0024072262652037697]:1.549492752481E0,21[&rate=0.0036404410747458127]:1.549492752481E0)[&rate=0.008922621906503293]:2.261615214524E0,20[&rate=0.005534491954394902]:3.811107967005E0)[&rate=0.009229706919276501]:3.829696799742E1)[&rate=0.016243033629421866]:2.201876165972E1,(((((7[&rate=0.0019354844181460513]:5.829894404142E0,6[&rate=0.00956021452714004]:5.829894404142E0)[&rate=0.013059901741520386]:1.021333411492E-1,1[&rate=0.005117427506153162]:5.932027745291E0)[&rate=0.008635804796088737]:6.819814522139E-1,5[&rate=0.003406190333899866]:6.614009197505E0)[&rate=0.0030498219983862637]:1.882138617846E0,((2[&rate=0.010736951750537327]:5.134828562982E-1,4[&rate=0.0028037943615721633]:5.134828562982E-1)[&rate=0.003523419329272991]:4.183153249012E-1,3[&rate=0.004352794078497458]:9.317981811994E-1)[&rate=0.00811310743292528]:7.564349634152E0)[&rate=0.004984362715054201]:5.554950460237E1,((30[&rate=0.006307353675970683]:5.98473025893E1,26[&rate=0.007645772656595157]:5.98473025893E1)[&rate=0.016243033629421866]:2.787352544865E0,32[&rate=0.0021066339878159555]:6.263465513416E1)[&rate=0.0014972565214994972]:1.410997283555E0)[&rate=0.02099716250471439]:8.118520642171E-2)[&rate=0.004599567279261122]:1.662481744732E1,12[&rate=0.006835020901839831]:8.075165507146E1)[&rate=0.00485385261927327]:3.082960411239E-1,((((33[&rate=0.006835020901839831]:6.646938092325E1,13[&rate=0.003993002111421824]:6.646938092325E1)[&rate=0.007873308757648982]:4.381140748727E0,((19[&rate=0.0028037943615721633]:4.343713885797E1,18[&rate=0.004475348849709203]:4.343713885797E1)[&rate=0.0072225191282240635]:2.720107977664E1,(11[&rate=0.0041118327610813995]:3.353586568833E1,29[&rate=0.0017395382194027587]:3.353586568833E1)[&rate=0.011746761284566068]:3.710235294627E1)[&rate=0.005117427506153162]:2.123030373659E-1)[&rate=0.0021066339878159555]:9.379442211574E0,((10[&rate=0.0019354844181460513]:7.500744597609E1,31[&rate=0.0031697867903832055]:7.500744597609E1)[&rate=0.012354858476480412]:4.983940272596E0,23[&rate=0.0041118327610813995]:7.999138624869E1)[&rate=0.013896932291208556]:2.385776348601E-1)[&rate=0.004725662532416282]:7.583656264776E-1,25[&rate=0.005680401878297703]:8.098832951003E1)[&rate=0.002262235854243648]:7.162160256006E-2)[&rate=0.010736951750537327]:1.38677068633E0,(17[&rate=0.0072225191282240635]:8.229208233817E1,(27[&rate=0.003757541471003611]:3.402763000855E1,28[&rate=0.009918060920863284]:3.402763000855E1)[&rate=0.005830274971774973]:4.826445232962E1)[&rate=0.003406190333899866]:1.546394607443E-1)[&rate=0.02794256433558149]:1.211379917662E1); +tree STATE_20000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55292.96881692097,EEF_ucld_branchRates=-266.168517335019,lnP=-55292.96881692097,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.5901600382069375E-4]:8.148091970122E0,9[&rate=8.961349023795466E-4]:8.148091970122E0)[&rate=5.593831989306519E-4]:3.275631792194E0,15[&rate=0.0010618207794870149]:1.142372376232E1)[&rate=0.0010618207794870149]:6.353637874456E1,(14[&rate=0.001016494541155432]:4.022064357962E1,24[&rate=0.001016494541155432]:4.022064357962E1)[&rate=0.002075626550811356]:3.473945892726E1)[&rate=0.004568586140453037]:1.420974794256E1,((((((30[&rate=7.634463046077018E-4]:6.040832871165E1,26[&rate=5.593831989306519E-4]:6.040832871165E1)[&rate=1.6608406432214607E-4]:2.68551119202E0,32[&rate=4.396977476677569E-4]:6.309383990367E1)[&rate=1.493784513081965E-4]:2.151742187668E0,((16[&rate=1.8216396979039352E-4]:4.480553589979E1,((22[&rate=0.002472512671490812]:1.459768404941E0,21[&rate=5.8757425971920247E-5]:1.459768404941E0)[&rate=0.0019254895191932859]:2.269723906498E0,20[&rate=6.285317632621968E-4]:3.729492311439E0)[&rate=8.603704421402534E-4]:4.107604358835E1)[&rate=0.00311832970148836]:2.027915130553E1,((((2[&rate=0.0012790316789111878]:4.906968682397E-1,4[&rate=0.0036549517900329284]:4.906968682397E-1)[&rate=5.378832160045775E-4]:5.676093650878E-1,3[&rate=0.0017967188835400997]:1.058306233328E0)[&rate=7.341031235014077E-4]:6.324361737722E0,5[&rate=3.052980314366944E-4]:7.38266797105E0)[&rate=3.052980314366944E-4]:1.092835624258E0,((7[&rate=3.8673659576297887E-4]:5.463006079877E0,6[&rate=3.8673659576297887E-4]:5.463006079877E0)[&rate=0.006988817954099029]:3.900051826173E-1,1[&rate=6.791476359934216E-4]:5.853011262494E0)[&rate=0.0012183511429375833]:2.622492332813E0)[&rate=2.897300845612171E-4]:5.660918361001E1)[&rate=0.00311832970148836]:1.608948860178E-1)[&rate=4.0398146467410213E-4]:1.64142794102E1,12[&rate=8.961349023795466E-4]:8.165986150153E1)[&rate=8.603704421402534E-4]:3.921862625682E-1,((((19[&rate=2.2855270088779914E-4]:5.019236493502E1,18[&rate=4.396977476677569E-4]:5.019236493502E1)[&rate=4.96883043656718E-4]:2.123519840185E1,((11[&rate=1.493784513081965E-4]:3.574260855447E1,29[&rate=1.1235304243657387E-4]:3.574260855447E1)[&rate=6.53340018073036E-4]:3.550524726692E1,(33[&rate=7.060378818120524E-4]:5.663892515255E1,13[&rate=4.582401070182594E-4]:5.663892515255E1)[&rate=3.052980314366944E-4]:1.460893066884E1)[&rate=0.001417336256920313]:1.797075154806E-1)[&rate=8.988447211996303E-5]:8.529391553883E0,((10[&rate=1.3168747146050748E-4]:7.316224812334E1,31[&rate=2.4377980242280156E-4]:7.316224812334E1)[&rate=0.0017967188835400997]:6.60957739429E0,23[&rate=4.7728854160503515E-4]:7.977182551763E1)[&rate=3.3704975445673983E-4]:1.851293731268E-1)[&rate=0.001684491288810692]:1.349247149708E0,25[&rate=7.341031235014077E-4]:8.130620204047E1)[&rate=2.2855270088779914E-4]:7.458457236368E-1)[&rate=0.001684491288810692]:1.721290954872E0,(17[&rate=8.961349023795466E-4]:8.323703559363E1,(27[&rate=3.5330390907476177E-4]:3.028723925019E1,28[&rate=0.0012790316789111878]:3.028723925019E1)[&rate=4.7728854160503515E-4]:5.294979634344E1)[&rate=6.285317632621968E-4]:5.363031253448E-1)[&rate=0.0013450625660334492]:5.396511730463E0); +tree STATE_30000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55165.13591323536,EEF_ucld_branchRates=-266.168517335019,lnP=-55165.13591323536,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.6359196488894883E-4]:9.264319876363E0,9[&rate=4.8545212747031337E-4]:9.264319876363E0)[&rate=3.6357824522326285E-4]:3.161876099649E0,15[&rate=4.995494111558678E-4]:1.242619597601E1)[&rate=7.115600569873193E-4]:6.38826989606E1,(14[&rate=0.0012876842754695054]:3.546954464833E1,24[&rate=6.92492891567586E-4]:3.546954464833E1)[&rate=0.002106389978854149]:4.083935028828E1)[&rate=0.0024586280710127604]:1.947233729943E1,(((((19[&rate=2.2972656836234444E-4]:4.919963633228E1,18[&rate=4.7153404059156084E-4]:4.919963633228E1)[&rate=3.6357824522326285E-4]:2.573124806917E1,((33[&rate=8.677062759495942E-4]:5.217414694573E1,13[&rate=5.138502622881336E-4]:5.217414694573E1)[&rate=1.615578440496492E-4]:2.259003989486E1,(11[&rate=3.770080206645897E-4]:3.480823158651E1,29[&rate=3.0846897647169105E-4]:3.480823158651E1)[&rate=8.943404467656337E-4]:3.995595525408E1)[&rate=9.521726263858471E-4]:1.666975608578E-1)[&rate=1.2033190569110708E-4]:9.855072652572E0,((10[&rate=1.615578440496492E-4]:7.247824013981E1,31[&rate=2.6359196488894883E-4]:7.247824013981E1)[&rate=7.951378614453684E-4]:1.157710757657E1,23[&rate=3.3641126981943936E-4]:8.405534771639E1)[&rate=0.0012876842754695054]:7.306093376306E-1)[&rate=7.730085583765644E-4]:1.73510481065E0,((((16[&rate=3.770080206645897E-4]:4.532702230922E1,((22[&rate=0.0017290583901739005]:1.752068175749E0,21[&rate=7.730085583765644E-4]:1.752068175749E0)[&rate=4.577708626551919E-4]:2.69987735171E0,20[&rate=6.740359859521338E-4]:4.451945527459E0)[&rate=0.0010925038989306256]:4.087507678176E1)[&rate=0.0010535867374189198]:2.337988248916E1,(((30[&rate=6.561393335494123E-4]:6.282025399368E1,26[&rate=3.0846897647169105E-4]:6.282025399368E1)[&rate=0.001423116709694369]:3.540204300138E0,32[&rate=2.2972656836234444E-4]:6.636045829381E1)[&rate=0.002106389978854149]:1.981102200455E0,((((2[&rate=4.4413808176659687E-4]:6.766996347332E-1,4[&rate=0.0010535867374189198]:6.766996347332E-1)[&rate=6.218489129232431E-4]:8.242558732462E-1,3[&rate=4.0376605201700297E-4]:1.500955507979E0)[&rate=0.0010174661934869889]:6.767887570689E0,5[&rate=4.4413808176659687E-4]:8.268843078668E0)[&rate=8.943404467656337E-4]:7.114075959876E-1,((7[&rate=3.0846897647169105E-4]:6.124204126274E0,6[&rate=6.218489129232431E-4]:6.124204126274E0)[&rate=5.735952748534499E-4]:6.891806027751E-1,1[&rate=4.3061061924309365E-4]:6.813384729049E0)[&rate=7.730085583765644E-4]:2.166865945606E0)[&rate=5.735952748534499E-4]:5.936130981961E1)[&rate=0.002106389978854149]:3.653443041051E-1)[&rate=8.943404467656337E-4]:1.643652216512E1,12[&rate=7.730085583765644E-4]:8.514342696349E1)[&rate=2.105099934427916E-4]:7.625859014056E-1,25[&rate=5.735952748534499E-4]:8.59060128649E1)[&rate=6.92492891567586E-4]:6.150489997703E-1)[&rate=0.001231393537232744]:2.599178698858E0,(17[&rate=6.387574895090293E-4]:8.747877344964E1,(27[&rate=4.995494111558678E-4]:3.157521799873E1,28[&rate=0.001231393537232744]:3.157521799873E1)[&rate=5.283794181886187E-4]:5.590355545091E1)[&rate=0.0015069148660890102]:1.641467113886E0)[&rate=0.0011807293218386024]:6.660991672513E0); +tree STATE_40000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55164.40851956385,EEF_ucld_branchRates=-266.168517335019,lnP=-55164.40851956385,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=0.0011172754989913194]:8.741058510332E0,9[&rate=7.68570643099146E-4]:8.741058510332E0)[&rate=6.315567728949794E-4]:6.169412441235E0,15[&rate=3.5080790352272345E-4]:1.491047095157E1)[&rate=0.0012556710282048617]:6.689595472873E1,(14[&rate=0.0012556710282048617]:4.033972840346E1,24[&rate=0.001182314307846734]:4.033972840346E1)[&rate=0.002100614441328816]:4.146669727684E1)[&rate=0.0024361620524523835]:2.167305773874E1,(((((19[&rate=2.9943740688101537E-4]:5.495296246912E1,18[&rate=2.0598214189987413E-4]:5.495296246912E1)[&rate=5.06457372835073E-4]:2.895136673982E1,((33[&rate=6.315567728949794E-4]:6.97621853631E1,13[&rate=3.2457396752303335E-4]:6.97621853631E1)[&rate=2.6337125207169857E-4]:1.365423625848E1,(11[&rate=2.9943740688101537E-4]:3.344209599268E1,29[&rate=3.6439922783118036E-4]:3.344209599268E1)[&rate=7.68570643099146E-4]:4.99743256289E1)[&rate=4.711396027530816E-4]:4.879075873604E-1)[&rate=2.4014003740296973E-4]:6.851452305342E0,((10[&rate=1.4830708734342888E-4]:7.256233335092E1,31[&rate=1.8327953357615866E-4]:7.256233335092E1)[&rate=0.0015517721000181135]:1.816014927111E1,23[&rate=3.7834248185515185E-4]:9.072248262203E1)[&rate=0.0018674732650384566]:3.329889224878E-2)[&rate=1.2323539227199787E-4]:1.622216240206E0,((((16[&rate=1.0955784928761159E-4]:4.235485497233E1,((22[&rate=6.082816797258076E-4]:2.740364060985E0,21[&rate=2.2869166867731463E-4]:2.740364060985E0)[&rate=0.002100614441328816]:2.603003757871E0,20[&rate=5.251481572020213E-4]:5.343367818856E0)[&rate=0.0010063278723949052]:3.701148715348E1)[&rate=0.0015517721000181135]:3.152663331729E1,(((30[&rate=4.5440902377667016E-4]:6.717748449857E1,26[&rate=4.2257922808644016E-4]:6.717748449857E1)[&rate=9.583524799252688E-4]:3.367140557011E0,32[&rate=2.9943740688101537E-4]:7.054462505558E1)[&rate=5.446050943313448E-4]:2.944910957558E0,((((2[&rate=3.1188067212229315E-4]:9.092531822116E-1,4[&rate=1.6018619457708092E-4]:9.092531822116E-1)[&rate=9.446777160936877E-5]:9.594652545698E-1,3[&rate=3.375414277389524E-4]:1.868718436781E0)[&rate=8.362409196066144E-4]:7.354448187E0,5[&rate=1.3605185556881633E-4]:9.223166623781E0)[&rate=8.012618111416493E-4]:5.61355952233E-1,((7[&rate=2.2869166867731463E-4]:6.673546883073E0,6[&rate=0.002100614441328816]:6.673546883073E0)[&rate=3.375414277389524E-4]:1.195895747114E0,1[&rate=1.8327953357615866E-4]:7.869442630188E0)[&rate=9.143706693003936E-4]:1.915079945826E0)[&rate=5.446050943313448E-4]:6.370501343712E1)[&rate=7.670912175908314E-5]:3.919522764837E-1)[&rate=6.560251296036593E-4]:1.459981216866E1,12[&rate=6.315567728949794E-4]:8.848130045828E1)[&rate=1.8327953357615866E-4]:2.864413919697E0,25[&rate=4.2257922808644016E-4]:9.134571437798E1)[&rate=7.670912175908314E-5]:1.032283376508E0)[&rate=6.082816797258076E-4]:1.482450058364E0,(17[&rate=7.379065807715135E-4]:8.90395740596E1,(27[&rate=4.884726289823178E-4]:3.040152860707E1,28[&rate=9.583524799252688E-4]:3.040152860707E1)[&rate=4.2257922808644016E-4]:5.863804545253E1)[&rate=2.2869166867731463E-4]:4.820873753251E0)[&rate=0.0013394661671240126]:9.619035606182E0); +tree STATE_50000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55143.704581966114,EEF_ucld_branchRates=-266.168517335019,lnP=-55143.704581966114,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.6522218666579823E-4]:7.699154395384E0,9[&rate=0.0011592656155629065]:7.699154395384E0)[&rate=6.501571003684036E-4]:8.155426729061E0,15[&rate=1.3276384501042284E-4]:1.585458112444E1)[&rate=0.0013881994856905953]:6.675115960128E1,(14[&rate=0.00227329106029058]:3.7665593814E1,24[&rate=0.0011592656155629065]:3.7665593814E1)[&rate=0.0015451193198280854]:4.494014691173E1)[&rate=0.0025815751125833446]:1.614104995265E1,(((((19[&rate=4.4239302624584856E-4]:3.887654952568E1,18[&rate=2.803404141042831E-4]:3.887654952568E1)[&rate=3.534995941938539E-4]:3.564299175777E1,((33[&rate=8.373924637354559E-4]:6.233385664304E1,13[&rate=5.563925906893235E-4]:6.233385664304E1)[&rate=2.1708723245547778E-4]:1.15498020581E1,(11[&rate=3.389878609469412E-4]:2.920808762624E1,29[&rate=4.734516190416763E-4]:2.920808762624E1)[&rate=0.0010313031823846908]:4.46755710749E1)[&rate=3.0988944085687215E-4]:6.358825823108E-1)[&rate=6.303090813469045E-4]:5.604954051638E0,((10[&rate=1.5874026777950106E-4]:5.657502814738E1,31[&rate=4.2720300213809723E-4]:5.657502814738E1)[&rate=8.105182733713689E-4]:2.333457331444E1,23[&rate=5.221596566581489E-4]:7.990960146182E1)[&rate=9.941728186129964E-4]:2.148938732701E-1)[&rate=3.389878609469412E-4]:1.032789550385E0,(25[&rate=5.05602326471683E-4]:8.035008671512E1,((((((2[&rate=1.9941639597352944E-4]:1.136290492417E0,4[&rate=0.0013224068672080007]:1.136290492417E0)[&rate=0.0011134592924492552]:1.763098417968E-1,3[&rate=0.0017530482908197703]:1.312600334214E0)[&rate=4.2720300213809723E-4]:6.657540543929E0,5[&rate=6.110524434104949E-4]:7.970140878143E0)[&rate=6.918303417018396E-4]:7.20440912289E-1,((7[&rate=0.0011592656155629065]:6.10673297717E0,6[&rate=5.741346893582827E-4]:6.10673297717E0)[&rate=1.9941639597352944E-4]:1.535525195056E0,1[&rate=8.105182733713689E-4]:7.642258172226E0)[&rate=2.803404141042831E-4]:1.048323618206E0)[&rate=3.534995941938539E-4]:6.000147903396E1,(((30[&rate=7.848172861287641E-4]:5.830711646885E1,26[&rate=4.893761795231981E-4]:5.830711646885E1)[&rate=0.0010709477857820497]:4.453107613383E0,32[&rate=4.2720300213809723E-4]:6.276022408223E1)[&rate=5.741346893582827E-4]:4.321675039833E0,(16[&rate=3.8265163820766767E-4]:3.69788883264E1,((22[&rate=0.00227329106029058]:1.950727134969E0,21[&rate=4.734516190416763E-4]:1.950727134969E0)[&rate=0.0025815751125833446]:2.833066579873E0,20[&rate=0.0017530482908197703]:4.783793714842E0)[&rate=0.0014617939620790276]:3.219509461156E1)[&rate=0.0014617939620790276]:3.010301079566E1)[&rate=1.5874026777950106E-4]:1.610161702325E0)[&rate=7.137696646102572E-4]:9.722438860072E0,12[&rate=7.848172861287641E-4]:7.841449968446E1)[&rate=2.3376419623485805E-4]:1.935587030665E0)[&rate=6.918303417018396E-4]:8.071981703492E-1)[&rate=8.373924637354559E-4]:2.433008171612E0,(17[&rate=9.263254625461475E-4]:7.864666213244E1,(27[&rate=4.734516190416763E-4]:2.653606938907E1,28[&rate=9.592627453772064E-4]:2.653606938907E1)[&rate=6.70646078063514E-4]:5.211059274337E1)[&rate=2.803404141042831E-4]:4.943630924648E0)[&rate=0.0017530482908197703]:1.51564976213E1); +tree STATE_60000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55128.43264471028,EEF_ucld_branchRates=-266.168517335019,lnP=-55128.43264471028,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=0.0014137690120696407]:6.618450029667E0,9[&rate=0.0012590800087104435]:6.618450029667E0)[&rate=1.5595757378044685E-4]:8.505965420493E0,15[&rate=6.022443667337674E-4]:1.512441545016E1)[&rate=0.0010463813464534144]:7.386935309626E1,(14[&rate=8.687774435406573E-4]:3.882221815901E1,24[&rate=9.672306977051902E-4]:3.882221815901E1)[&rate=0.0011412109637408158]:5.017155038741E1)[&rate=0.001330523661230903]:8.216040928987E0,(((((19[&rate=3.49716491713515E-4]:3.56148351938E1,18[&rate=3.869149769191827E-4]:3.56148351938E1)[&rate=4.5162288998982727E-4]:3.628877320041E1,((33[&rate=9.672306977051902E-4]:6.145046701581E1,13[&rate=3.37442363248515E-4]:6.145046701581E1)[&rate=2.0786429950841025E-4]:9.681327818071E0,(11[&rate=2.363945861999226E-4]:2.477407200355E1,29[&rate=4.2519456353245523E-4]:2.477407200355E1)[&rate=8.993816356351439E-4]:4.635772283033E1)[&rate=5.222607428139351E-4]:7.718135603272E-1)[&rate=2.628474826314998E-4]:5.040321122993E0,((10[&rate=4.2519456353245523E-4]:4.742720324756E1,31[&rate=2.628474826314998E-4]:4.742720324756E1)[&rate=5.529056617005928E-4]:2.79700344561E1,23[&rate=3.995235108008269E-4]:7.539723770367E1)[&rate=6.022443667337674E-4]:1.546691813533E0)[&rate=3.129115300916073E-4]:8.857494375281E-1,(25[&rate=5.529056617005928E-4]:7.710185743343E1,(((16[&rate=3.129115300916073E-4]:3.67407104529E1,((22[&rate=0.0016357726787091162]:2.117079179622E0,21[&rate=4.5162288998982727E-4]:2.117079179622E0)[&rate=0.002016757395627807]:2.245458560114E0,20[&rate=6.964407635161496E-4]:4.362537739737E0)[&rate=0.0010914712782616606]:3.237817271317E1)[&rate=0.0012590800087104435]:2.853869078904E1,(((30[&rate=8.400263789872712E-4]:5.513457091006E1,26[&rate=5.688648391815664E-4]:5.513457091006E1)[&rate=0.002376196027660009]:3.26641187757E0,32[&rate=5.075084716948852E-4]:5.840098278763E1)[&rate=2.363945861999226E-4]:6.282540406919E0,((((2[&rate=1.9228135695119827E-4]:1.172568540085E0,4[&rate=0.0015131438687149806]:1.172568540085E0)[&rate=0.0011966201356656719]:2.435409656152E-1,3[&rate=1.323664321733681E-4]:1.4161095057E0)[&rate=4.789947798668154E-4]:6.296559236964E0,5[&rate=2.0786429950841025E-4]:7.712668742664E0)[&rate=4.3830260927248924E-4]:1.009280399811E0,((7[&rate=5.688648391815664E-4]:5.099550134522E0,6[&rate=3.620358616172635E-4]:5.099550134522E0)[&rate=3.995235108008269E-4]:1.434182132026E0,1[&rate=1.323664321733681E-4]:6.533732266548E0)[&rate=6.022443667337674E-4]:2.188216875927E0)[&rate=4.3830260927248924E-4]:5.596157405207E1)[&rate=7.176060184719216E-4]:5.958780473966E-1)[&rate=9.320957431010094E-4]:8.359094353625E0,12[&rate=7.397286261442928E-4]:7.363849559557E1)[&rate=1.7526563220331728E-4]:3.463361837858E0)[&rate=6.964407635161496E-4]:7.278215212991E-1)[&rate=3.869149769191827E-4]:3.184956058222E0,(17[&rate=7.872592771710153E-4]:7.699765944001E1,(27[&rate=2.881693697215938E-4]:3.038622607528E1,28[&rate=8.129139709977752E-4]:3.038622607528E1)[&rate=6.761454729012033E-4]:4.661143336473E1)[&rate=7.176060184719216E-4]:4.016975572936E0)[&rate=0.0032478254431917613]:1.619517446246E1); +tree STATE_70000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55128.39268554542,EEF_ucld_branchRates=-266.168517335019,lnP=-55128.39268554542,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.585151191018052E-4]:7.032541395121E0,9[&rate=9.991853598961575E-4]:7.032541395121E0)[&rate=3.865649825755008E-4]:1.08805176202E1,15[&rate=4.7363474150521006E-4]:1.791305901532E1)[&rate=0.0010386303178376883]:8.238468646083E1,(14[&rate=0.0012933687039236462]:3.951857233359E1,24[&rate=0.0017558550219353194]:3.951857233359E1)[&rate=0.001232392962379348]:6.077917314257E1)[&rate=0.001081123345290904]:9.012038681597E0,(((((19[&rate=3.453625773359237E-4]:3.916050321747E1,18[&rate=1.2526913731134655E-4]:3.916050321747E1)[&rate=6.673989472034059E-4]:3.790447565753E1,((33[&rate=7.334557059476996E-4]:6.233326711542E1,13[&rate=3.317882691462321E-4]:6.233326711542E1)[&rate=2.348439707193408E-4]:1.364220077653E1,(11[&rate=1.2526913731134655E-4]:2.859464151889E1,29[&rate=4.436738896942883E-4]:2.859464151889E1)[&rate=0.001081123345290904]:4.738082637306E1)[&rate=6.082249417209873E-4]:1.089510983049E0)[&rate=2.634514219173201E-4]:3.414147767797E0,((10[&rate=2.0429023979000657E-4]:4.387104585847E1,31[&rate=4.585151191018052E-4]:4.387104585847E1)[&rate=4.1472035193700513E-4]:3.576824370918E1,23[&rate=4.7363474150521006E-4]:7.963928956765E1)[&rate=4.290843580905898E-4]:8.398370751511E-1)[&rate=4.585151191018052E-4]:1.351671216344E0,(25[&rate=6.673989472034059E-4]:8.076070918802E1,(((16[&rate=2.0429023979000657E-4]:3.718437644673E1,((22[&rate=0.001910571731701351]:2.330079868284E0,21[&rate=1.4963497568257263E-4]:2.330079868284E0)[&rate=0.0023971938501102076]:2.567394902743E0,20[&rate=5.048203099648665E-4]:4.897474771027E0)[&rate=0.0013615566803819605]:3.22869016757E1)[&rate=0.0014387383839769004]:3.237326380908E1,(((((2[&rate=8.08485808607798E-4]:9.188496499608E-1,4[&rate=0.0016312411806085512]:9.188496499608E-1)[&rate=8.955155296445328E-4]:6.047355529877E-1,3[&rate=5.897555638752528E-4]:1.523585202948E0)[&rate=0.0014387383839769004]:6.40542692094E0,5[&rate=2.634514219173201E-4]:7.929012123889E0)[&rate=1.4963497568257263E-4]:2.254986538086E0,((7[&rate=5.897555638752528E-4]:5.853653732987E0,6[&rate=6.673989472034059E-4]:5.853653732987E0)[&rate=2.1989638793561787E-4]:1.41691958048E0,1[&rate=5.374657016927087E-4]:7.270573313467E0)[&rate=0.0013615566803819605]:2.913425348508E0)[&rate=3.727209984266885E-4]:5.841559306923E1,((30[&rate=9.279268936306056E-4]:5.663785197227E1,26[&rate=5.897555638752528E-4]:5.663785197227E1)[&rate=0.0023971938501102076]:6.153054673628E0,32[&rate=5.374657016927087E-4]:6.27909066459E1)[&rate=2.9106304110590935E-4]:5.808685085304E0)[&rate=7.573431845976776E-4]:9.580485246114E-1)[&rate=7.823167187383624E-4]:5.910647941656E0,12[&rate=7.573431845976776E-4]:7.546828819747E1)[&rate=2.348439707193408E-4]:5.29242099055E0)[&rate=0.001177317694370326]:1.070088671124E0)[&rate=4.0055591622184164E-4]:3.633321181933E0,(17[&rate=8.359755761404912E-4]:8.059604028382E1,(27[&rate=3.0467905577474715E-4]:3.141525951505E1,28[&rate=9.623929024170825E-4]:3.141525951505E1)[&rate=4.1472035193700513E-4]:4.918078076877E1)[&rate=8.08485808607798E-4]:4.868078757258E0)[&rate=0.004017527639800529]:2.384566511667E1); +tree STATE_80000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.33526278501,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.33526278501,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.572370751255679E-4]:7.053178927989E0,9[&rate=0.0016764508662859918]:7.053178927989E0)[&rate=7.154896369662258E-4]:8.134390999851E0,15[&rate=5.694066029450496E-4]:1.518756992784E1)[&rate=9.605211148433177E-4]:8.544462498537E1,(14[&rate=0.0011115825038663016]:3.715222519975E1,24[&rate=0.0013625458846234508]:3.715222519975E1)[&rate=8.702236079192744E-4]:6.347996971345E1)[&rate=6.725944714318667E-4]:1.019378237013E1,(((((19[&rate=4.6140445450211753E-4]:3.455628063528E1,18[&rate=5.212040391490219E-4]:3.455628063528E1)[&rate=4.973657499945528E-4]:4.029772177115E1,((33[&rate=8.129508769081095E-4]:6.166522114308E1,13[&rate=3.852906410751996E-4]:6.166522114308E1)[&rate=3.252651716419258E-4]:1.254373339654E1,(11[&rate=3.252651716419258E-4]:2.562329620124E1,29[&rate=2.3485374516229548E-4]:2.562329620124E1)[&rate=7.953324371537528E-4]:4.858565833838E1)[&rate=7.305203322605673E-4]:6.450478668111E-1)[&rate=3.568994232488353E-4]:1.446816266886E0,((10[&rate=5.331564871629184E-4]:3.35465594785E1,31[&rate=4.1173052406031773E-4]:3.35465594785E1)[&rate=2.6436129441352894E-4]:4.166419939419E1,23[&rate=5.331564871629184E-4]:7.521075887269E1)[&rate=5.572370751255679E-4]:1.090059800628E0)[&rate=5.941054270209015E-4]:2.648137848497E0,(25[&rate=9.360731917722879E-4]:7.829733980093E1,(((16[&rate=2.3485374516229548E-4]:3.650413676086E1,((22[&rate=2.6436129441352894E-4]:2.207819578686E0,21[&rate=5.092814272089465E-4]:2.207819578686E0)[&rate=9.865136782244697E-4]:2.709723370296E0,20[&rate=8.910720551966045E-4]:4.917542948982E0)[&rate=0.0012973642039727261]:3.158659381188E1)[&rate=0.0011932900349283604]:3.505111554742E1,(((30[&rate=6.323613545900664E-4]:5.219805269997E1,26[&rate=6.589241212294761E-4]:5.219805269997E1)[&rate=0.0011932900349283604]:7.427354975592E0,32[&rate=4.1173052406031773E-4]:5.962540767557E1)[&rate=7.154896369662258E-4]:1.035795321802E1,((((2[&rate=7.783343549930989E-4]:1.001216036479E0,4[&rate=6.455214450171927E-4]:1.001216036479E0)[&rate=3.252651716419258E-4]:7.270654481206E-1,3[&rate=6.194201818369134E-4]:1.728281484599E0)[&rate=0.0018870838986441607]:7.510023883952E0,5[&rate=3.852906410751996E-4]:9.238305368552E0)[&rate=9.12976970243385E-4]:1.449683536867E0,((7[&rate=0.0010142858905819647]:6.411516510021E0,6[&rate=7.783343549930989E-4]:6.411516510021E0)[&rate=0.0011502711817636569]:1.279265361769E0,1[&rate=5.694066029450496E-4]:7.69078187179E0)[&rate=8.129508769081095E-4]:2.997207033629E0)[&rate=4.4924741624434363E-4]:5.929537198816E1)[&rate=5.694066029450496E-4]:1.571891414692E0)[&rate=0.0014413614808857953]:4.637332003713E0,12[&rate=7.61899370243201E-4]:7.619258431199E1)[&rate=3.568994232488353E-4]:2.10475548894E0)[&rate=0.0011115825038663016]:6.516167208858E-1)[&rate=6.589241212294761E-4]:4.4692717474E0,(17[&rate=7.953324371537528E-4]:7.920023136166E1,(27[&rate=5.451605178379577E-4]:2.765793749302E1,28[&rate=0.0010441280878184776]:2.765793749302E1)[&rate=4.973657499945528E-4]:5.154229386863E1)[&rate=0.0010441280878184776]:4.217996907559E0)[&rate=0.0023644128165407345]:2.740774901412E1); +tree STATE_90000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55117.659152101216,EEF_ucld_branchRates=-266.168517335019,lnP=-55117.659152101216,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.33580822165846E-4]:7.302682610234E0,9[&rate=0.0011257362524335504]:7.302682610234E0)[&rate=4.33580822165846E-4]:7.385506716476E0,15[&rate=6.171671034550184E-4]:1.468818932671E1)[&rate=0.0010897703531426212]:8.369325382558E1,(14[&rate=0.0012142243752146823]:3.860491459478E1,24[&rate=9.331648675925535E-4]:3.860491459478E1)[&rate=9.773619512805016E-4]:5.977652855751E1)[&rate=0.00143782478945856]:2.930685218315E1,(((((19[&rate=5.339169275872539E-4]:2.668161617476E1,18[&rate=6.066311698254334E-4]:2.668161617476E1)[&rate=3.7766429794855406E-4]:4.966755751601E1,((33[&rate=6.715327202276851E-4]:6.682706042983E1,13[&rate=3.189325984497443E-4]:6.682706042983E1)[&rate=5.128959691417147E-4]:9.28120800637E0,(11[&rate=5.650380563431234E-4]:2.159014864651E1,29[&rate=5.443225259362119E-4]:2.159014864651E1)[&rate=8.940783780867862E-4]:5.451811978969E1)[&rate=6.493788846577463E-4]:2.409052545684E-1)[&rate=6.603756892689464E-4]:2.117097419381E0,((10[&rate=7.969732155045665E-4]:2.923736037276E1,31[&rate=4.0735047416849793E-4]:2.923736037276E1)[&rate=5.857590139292751E-4]:4.883343072059E1,23[&rate=4.5768851588483316E-4]:7.807079109335E1)[&rate=8.115722314091445E-4]:3.954800167974E-1)[&rate=5.753884663829673E-4]:2.4548450935E0,(25[&rate=7.181709783237821E-4]:7.996386557212E1,(((16[&rate=3.416025874238101E-4]:3.551182210233E1,((22[&rate=9.54527315195231E-4]:2.201656940293E0,21[&rate=6.171671034550184E-4]:2.201656940293E0)[&rate=6.603756892689464E-4]:2.574157245262E0,20[&rate=0.0010019241914578935]:4.775814185555E0)[&rate=0.0015834755411275995]:3.073600791677E1)[&rate=0.0011666548618817078]:4.006780096388E1,(((((3[&rate=8.424586056378154E-4]:1.371374228077E0,4[&rate=0.001342405511842771]:1.371374228077E0)[&rate=8.760519924161573E-4]:3.634541225659E-1,2[&rate=7.691952498962801E-4]:1.734828350643E0)[&rate=7.559275207527407E-4]:8.716345408713E0,5[&rate=5.857590139292751E-4]:1.045117375936E1)[&rate=2.89596639990363E-4]:1.05106401643E0,((7[&rate=5.546892603772489E-4]:7.162657712172E0,6[&rate=4.914128383342643E-4]:7.162657712172E0)[&rate=0.0010019241914578935]:2.100977915501E0,1[&rate=4.0735047416849793E-4]:9.263635627673E0)[&rate=7.828632343894969E-4]:2.238602148113E0)[&rate=5.961674831966385E-4]:6.190885121336E1,((30[&rate=6.715327202276851E-4]:5.32451674374E1,26[&rate=7.181709783237821E-4]:5.32451674374E1)[&rate=0.0010019241914578935]:8.902631204362E0,32[&rate=3.607409901316896E-4]:6.214779864176E1)[&rate=7.559275207527407E-4]:1.126329034739E1)[&rate=5.339169275872539E-4]:2.168534077055E0)[&rate=0.001057632563005913]:4.144571256345E0,12[&rate=9.54527315195231E-4]:7.972419432255E1)[&rate=3.189325984497443E-4]:2.396712495705E-1)[&rate=7.181709783237821E-4]:9.572506315264E-1)[&rate=4.458449411903105E-4]:5.247563619149E0,(17[&rate=8.588774255383282E-4]:8.170993406915E1,(27[&rate=6.385237082230468E-4]:2.498489226788E1,28[&rate=8.115722314091445E-4]:2.498489226788E1)[&rate=5.546892603772489E-4]:5.672504180127E1)[&rate=3.7766429794855406E-4]:4.458745753643E0)[&rate=0.00143782478945856]:4.151961551265E1); +tree STATE_100000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.583916827825,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.583916827825,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.208618705868827E-4]:7.187809098267E0,9[&rate=0.0011184812239877957]:7.187809098267E0)[&rate=0.0010090055875050816]:7.285827205874E0,15[&rate=4.193962609855181E-4]:1.447363630414E1)[&rate=8.525289635861237E-4]:9.114075004458E1,(14[&rate=0.0012306796420496798]:4.378170272962E1,24[&rate=5.775069189829491E-4]:4.378170272962E1)[&rate=8.042612466647114E-4]:6.18326836191E1)[&rate=9.313773675085644E-4]:2.337973453076E1,(((((19[&rate=7.896094743188346E-4]:1.908623216041E1,18[&rate=5.30306766856563E-4]:1.908623216041E1)[&rate=4.824205222269677E-4]:5.512825235201E1,((33[&rate=6.464429385563455E-4]:6.315668350733E1,13[&rate=3.519984061584087E-4]:6.315668350733E1)[&rate=3.1302784691553744E-4]:1.067561961378E1,(11[&rate=3.677106588883793E-4]:1.818577760215E1,29[&rate=3.341872683794918E-4]:1.818577760215E1)[&rate=6.261435792133404E-4]:5.564652551896E1)[&rate=4.824205222269677E-4]:3.821813913005E-1)[&rate=5.30306766856563E-4]:1.704350702883E0,((10[&rate=6.892760821357626E-4]:2.819426378395E1,31[&rate=5.58564190912116E-4]:2.819426378395E1)[&rate=6.063919678960947E-4]:4.546748660691E1,23[&rate=5.39726967375177E-4]:7.366175039085E1)[&rate=4.193962609855181E-4]:2.257084824445E0)[&rate=9.096154316532493E-4]:1.991265593559E0,(25[&rate=7.363119127905988E-4]:7.593058700835E1,(((((30[&rate=7.489476830301054E-4]:5.446409938108E1,26[&rate=6.261435792133404E-4]:5.446409938108E1)[&rate=6.162077086407009E-4]:7.241296259736E0,32[&rate=5.39726967375177E-4]:6.170539564081E1)[&rate=6.892760821357626E-4]:7.382948750283E0,((((3[&rate=8.525289635861237E-4]:1.490381041492E0,4[&rate=8.893608555433277E-4]:1.490381041492E0)[&rate=4.306886562845776E-4]:1.974134478438E-1,2[&rate=4.4157983882193855E-4]:1.687794489336E0)[&rate=3.951927094606625E-4]:9.177046190219E0,5[&rate=7.620102249605487E-4]:1.086484067955E1)[&rate=6.78236997851043E-4]:7.653984021203E-1,((7[&rate=6.063919678960947E-4]:6.602659039006E0,6[&rate=9.806417130672391E-4]:6.602659039006E0)[&rate=3.951927094606625E-4]:1.13188302486E0,1[&rate=2.855395966740293E-4]:7.734542063866E0)[&rate=5.870570984311687E-4]:3.895697017809E0)[&rate=5.208618705868827E-4]:5.745810530942E1)[&rate=5.775069189829491E-4]:3.846185014387E0,(16[&rate=3.519984061584087E-4]:3.61020434297E1,((22[&rate=0.0013138686282367907]:2.486605610432E0,21[&rate=3.677106588883793E-4]:2.486605610432E0)[&rate=0.0010407010503511625]:2.364665029962E0,20[&rate=0.0010767028418223344]:4.851270640394E0)[&rate=7.620102249605487E-4]:3.12507727893E1)[&rate=9.096154316532493E-4]:3.683248597578E1)[&rate=8.356293098777016E-4]:2.028844172799E0,12[&rate=8.525289635861237E-4]:7.496337357828E1)[&rate=7.005748996578308E-4]:9.672134300691E-1)[&rate=5.58564190912116E-4]:1.979513800508E0)[&rate=5.11372976793809E-4]:5.263735206982E0,(17[&rate=9.313773675085644E-4]:7.675792577375E1,(27[&rate=6.162077086407009E-4]:2.559277245057E1,28[&rate=0.0012306796420496798]:2.559277245057E1)[&rate=7.121602431207865E-4]:5.116515332319E1)[&rate=7.363119127905988E-4]:6.415910242086E0)[&rate=0.0014403517852423996]:4.582028486364E1); +tree STATE_110000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55111.51881461051,EEF_ucld_branchRates=-266.168517335019,lnP=-55111.51881461051,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.2569631578625314E-4]:8.531303108964E0,9[&rate=6.193614534660965E-4]:8.531303108964E0)[&rate=7.714015932701841E-4]:4.800291069417E0,15[&rate=4.7024937498119665E-4]:1.333159417838E1)[&rate=6.536614826565535E-4]:9.420896562883E1,(14[&rate=9.359535121913269E-4]:4.47732445897E1,24[&rate=0.001044723640170405]:4.47732445897E1)[&rate=8.924515524635973E-4]:6.276731521752E1)[&rate=5.864908097408716E-4]:1.528103434488E1,(((((19[&rate=6.082708566218781E-4]:1.54621357224E1,18[&rate=3.75718285208186E-4]:1.54621357224E1)[&rate=5.230915518999972E-4]:5.25107909756E1,((33[&rate=5.757657952926047E-4]:6.204197464271E1,13[&rate=3.29835839603801E-4]:6.204197464271E1)[&rate=9.359535121913269E-4]:5.589327534666E0,(11[&rate=5.545587701715301E-4]:1.541728128214E1,29[&rate=5.335590133554677E-4]:1.541728128214E1)[&rate=7.567724239888876E-4]:5.221402089524E1)[&rate=3.464486391724557E-4]:3.416245206238E-1)[&rate=3.616117142426158E-4]:4.085796916014E0,((10[&rate=5.335590133554677E-4]:2.40981323579E1,31[&rate=5.230915518999972E-4]:2.40981323579E1)[&rate=3.1111609988749417E-4]:4.75807039228E1,23[&rate=6.306103403334994E-4]:7.16788362807E1)[&rate=2.606400660391243E-4]:3.798873333134E-1)[&rate=3.29835839603801E-4]:1.049161049613E0,(25[&rate=8.18685926810497E-4]:7.108002460182E1,(((((30[&rate=7.155692429902346E-4]:4.993120357997E1,26[&rate=7.567724239888876E-4]:4.993120357997E1)[&rate=0.0012723747220772577]:7.228440848188E0,32[&rate=3.29835839603801E-4]:5.715964442816E1)[&rate=4.0170890043088526E-4]:8.507634259863E0,((((3[&rate=7.02596272796497E-4]:1.736825823356E0,4[&rate=5.12620006040666E-4]:1.736825823356E0)[&rate=4.0170890043088526E-4]:1.107275816464E-1,2[&rate=8.725695114882345E-4]:1.847553405003E0)[&rate=9.599730494010644E-4]:7.643988006161E0,5[&rate=7.288984308866874E-4]:9.491541411164E0)[&rate=0.0010139516836424796]:1.031762555891E0,((7[&rate=4.139001803709051E-4]:7.406857262016E0,6[&rate=6.082708566218781E-4]:7.406857262016E0)[&rate=7.02596272796497E-4]:4.208869430926E-1,1[&rate=5.12620006040666E-4]:7.827744205109E0)[&rate=8.537264830669652E-4]:2.695559761946E0)[&rate=4.7024937498119665E-4]:5.514397472097E1)[&rate=7.714015932701841E-4]:1.951329798213E0,(16[&rate=2.8903970056852994E-4]:3.074903787045E1,((22[&rate=0.0016101698834131224]:2.363993758637E0,21[&rate=0.0010139516836424796]:2.363993758637E0)[&rate=8.18685926810497E-4]:1.972076701421E0,20[&rate=8.537264830669652E-4]:4.336070460058E0)[&rate=0.001044723640170405]:2.641296741039E1)[&rate=0.0011169932400667242]:3.686957061579E1)[&rate=0.0011605674490551298]:2.586523745863E0,12[&rate=6.193614534660965E-4]:7.02051322321E1)[&rate=0.0011169932400667242]:8.74892369718E-1)[&rate=6.306103403334994E-4]:2.027860061812E0)[&rate=4.7024937498119665E-4]:2.770894453767E0,(17[&rate=5.973199702250081E-4]:7.017736739668E1,(27[&rate=5.545587701715301E-4]:2.656552702748E1,28[&rate=0.0013489330346413049]:2.656552702748E1)[&rate=6.65505713916869E-4]:4.36118403692E1)[&rate=7.567724239888876E-4]:5.701411720721E0)[&rate=0.0014519624256512898]:4.694281503469E1); +tree STATE_120000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55123.96640602601,EEF_ucld_branchRates=-266.168517335019,lnP=-55123.96640602601,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=0.001154028279339214]:6.881974092744E0,9[&rate=0.0014070397486576252]:6.881974092744E0)[&rate=8.938856601943283E-4]:9.028621354814E0,15[&rate=5.408960858917783E-4]:1.591059544756E1)[&rate=8.792718135781054E-4]:8.850268032165E1,(14[&rate=0.00125579139366644]:4.251574545218E1,24[&rate=0.0012984612495937594]:4.251574545218E1)[&rate=0.0010323236496681345]:6.189753031703E1)[&rate=0.0011845502146668734]:1.512938465516E1,(((((19[&rate=8.512413294940105E-4]:1.328747351054E1,18[&rate=6.475014280345919E-4]:1.328747351054E1)[&rate=3.857461073898542E-4]:5.635318569396E1,((11[&rate=4.3288032845708723E-4]:1.492178530521E1,29[&rate=9.089549406405198E-4]:1.492178530521E1)[&rate=9.089549406405198E-4]:5.314568471959E1,(33[&rate=0.00101221440243677]:6.31668967817E1,13[&rate=4.690781713675698E-4]:6.31668967817E1)[&rate=6.813844943196404E-4]:4.9005732431E0)[&rate=6.588004823746652E-4]:1.573189179703E0)[&rate=7.5041260167986E-4]:2.922796814718E0,((10[&rate=7.38666537370468E-4]:2.606409973842E1,31[&rate=6.475014280345919E-4]:2.606409973842E1)[&rate=4.1135004049859834E-4]:4.548678889575E1,23[&rate=4.999817555838189E-4]:7.155088863417E1)[&rate=7.743457984232568E-4]:1.012567385052E0)[&rate=4.5185760976440987E-4]:2.033294327604E0,(25[&rate=6.475014280345919E-4]:7.406745959262E1,(((((30[&rate=8.24566699229824E-4]:5.237162588967E1,26[&rate=7.865734272611986E-4]:5.237162588967E1)[&rate=0.00125579139366644]:6.552030909321E0,32[&rate=4.5185760976440987E-4]:5.892365679899E1)[&rate=5.78109989517332E-4]:1.009967695483E1,((((3[&rate=9.931023338125501E-4]:1.910482407461E0,4[&rate=8.37750825056855E-4]:1.910482407461E0)[&rate=6.588004823746652E-4]:3.069282034589E-1,2[&rate=8.938856601943283E-4]:2.21741061092E0)[&rate=4.999817555838189E-4]:7.508563022327E0,5[&rate=4.3288032845708723E-4]:9.725973633247E0)[&rate=0.00101221440243677]:1.402931358405E0,((7[&rate=5.277858779161321E-4]:7.426746783052E0,6[&rate=0.001126057008800308]:7.426746783052E0)[&rate=5.141865840802532E-4]:5.452125877734E-1,1[&rate=8.938856601943283E-4]:7.971959370825E0)[&rate=0.0010323236496681345]:3.156945620826E0)[&rate=6.475014280345919E-4]:5.789442876217E1)[&rate=6.017300554949747E-4]:6.495744836962E-1,(16[&rate=6.813844943196404E-4]:3.306426420257E1,((22[&rate=0.0011002012581250774]:2.276478088381E0,21[&rate=7.622990871400344E-4]:2.276478088381E0)[&rate=7.990037490877938E-4]:4.433248437201E0,20[&rate=0.001578965586127157]:6.709726525582E0)[&rate=0.0012182041079476585]:2.635453767699E1)[&rate=0.0010535708422191687]:3.660864403494E1)[&rate=0.001728188132682674]:1.791968331547E0,12[&rate=7.5041260167986E-4]:7.146487656906E1)[&rate=7.155195682441027E-4]:2.602583023553E0)[&rate=7.622990871400344E-4]:5.292907542083E-1)[&rate=7.04081562570523E-4]:4.995431759705E0,(17[&rate=9.574179370183233E-4]:7.367126000673E1,(27[&rate=5.900085973491877E-4]:2.608616248564E1,28[&rate=9.931023338125501E-4]:2.608616248564E1)[&rate=7.270417531486815E-4]:4.758509752109E1)[&rate=3.524383815815313E-4]:5.920922099802E0)[&rate=0.0014070397486576252]:3.995047831783E1); +tree STATE_130000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.08330990378,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.08330990378,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.6981867862945943E-4]:1.061966333407E1,9[&rate=6.846917457722275E-4]:1.061966333407E1)[&rate=0.0010377384514722113]:6.503950714856E0,15[&rate=9.90619290791368E-4]:1.712361404892E1)[&rate=9.303840717680246E-4]:8.690804440477E1,(14[&rate=0.0011604036680096443]:4.514611096727E1,24[&rate=0.0012008182590476665]:4.514611096727E1)[&rate=0.0013038029447749013]:5.888554748643E1)[&rate=6.520909903471902E-4]:2.565612376641E1,(((((19[&rate=7.791005634698475E-4]:1.608897138078E1,18[&rate=7.301524995217394E-4]:1.608897138078E1)[&rate=4.071754048642794E-4]:5.897665897118E1,((11[&rate=6.958059560788786E-4]:1.42142597815E1,29[&rate=5.351630096906742E-4]:1.42142597815E1)[&rate=4.3781700456403964E-4]:5.884037639977E1,(33[&rate=6.958059560788786E-4]:6.503557267879E1,13[&rate=4.230818895242498E-4]:6.503557267879E1)[&rate=5.241079371615782E-4]:8.019063502483E0)[&rate=7.791005634698475E-4]:2.010994170689E0)[&rate=7.185163383227367E-4]:2.345138331591E0,((10[&rate=4.895688863531634E-4]:2.250575304674E1,31[&rate=8.19114497371842E-4]:2.250575304674E1)[&rate=3.6981867862945943E-4]:5.353547959543E1,23[&rate=4.7741471947981167E-4]:7.604123264217E1)[&rate=9.493265581019099E-4]:1.369536041381E0)[&rate=3.4625241415304987E-4]:1.0801703092E0,(25[&rate=5.991822655647798E-4]:7.706703109423E1,(((((((3[&rate=3.4625241415304987E-4]:1.611049558567E0,4[&rate=8.478963534313421E-4]:1.611049558567E0)[&rate=0.0019197730767652286]:1.169133724437E-1,2[&rate=3.1565338514862257E-4]:1.727962931011E0)[&rate=6.202361936495881E-4]:8.548824973617E0,5[&rate=6.097028960906808E-4]:1.027678790463E1)[&rate=8.788144330096818E-4]:1.618675667627E0,((7[&rate=4.7741471947981167E-4]:8.441112013881E0,6[&rate=6.097028960906808E-4]:8.441112013881E0)[&rate=9.303840717680246E-4]:7.311972238745E-1,1[&rate=5.886553500640413E-4]:9.172309237756E0)[&rate=8.053966642731579E-4]:2.723154334499E0)[&rate=5.675009465966788E-4]:6.096332499108E1,((30[&rate=6.414128093341293E-4]:5.585878961333E1,26[&rate=4.7741471947981167E-4]:5.585878961333E1)[&rate=0.0011248309332377185]:8.169749812375E0,32[&rate=5.991822655647798E-4]:6.40285394257E1)[&rate=9.693508187731965E-4]:8.830249137631E0)[&rate=0.0016095010600754324]:9.683283435423E-1,(16[&rate=7.07074329303432E-4]:3.820134879592E1,((22[&rate=8.332656139090173E-4]:2.823201311288E0,21[&rate=9.303840717680246E-4]:2.823201311288E0)[&rate=6.414128093341293E-4]:3.275011671131E0,20[&rate=0.0012008182590476665]:6.098212982419E0)[&rate=0.0011248309332377185]:3.21031358135E1)[&rate=8.332656139090173E-4]:3.562576811095E1)[&rate=0.0010377384514722113]:2.0751702005E0,12[&rate=7.540961731913215E-4]:7.590228710738E1)[&rate=9.693508187731965E-4]:1.164743986852E0)[&rate=8.053966642731579E-4]:1.42390789852E0)[&rate=5.460588518542255E-4]:2.406506885679E0,(17[&rate=8.952310318773309E-4]:7.362154965232E1,(27[&rate=5.886553500640413E-4]:3.206400909076E1,28[&rate=7.07074329303432E-4]:3.206400909076E1)[&rate=6.737130833897111E-4]:4.155754056156E1)[&rate=4.895688863531634E-4]:7.275896226104E0)[&rate=0.0012477287477185646]:4.879033634168E1); +tree STATE_140000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55118.20399604438,EEF_ucld_branchRates=-266.168517335019,lnP=-55118.20399604438,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.550676009090287E-4]:9.941058321033E0,9[&rate=4.550676009090287E-4]:9.941058321033E0)[&rate=3.60346179245397E-4]:5.531711235864E0,15[&rate=7.518924749822438E-4]:1.54727695569E1)[&rate=9.599935659988625E-4]:9.10949924026E1,(14[&rate=9.091768519689211E-4]:3.974590983573E1,24[&rate=8.033359719668815E-4]:3.974590983573E1)[&rate=9.910940960290032E-4]:6.682185212376E1)[&rate=7.404032616229928E-4]:1.931357598219E1,(((((19[&rate=8.681867766571084E-4]:1.349921951635E1,18[&rate=7.895052448192487E-4]:1.349921951635E1)[&rate=3.60346179245397E-4]:5.748486862915E1,((11[&rate=5.225612398910059E-4]:1.713178392558E1,29[&rate=6.983114813870708E-4]:1.713178392558E1)[&rate=7.895052448192487E-4]:5.333509443358E1,(33[&rate=7.895052448192487E-4]:5.797821411063E1,13[&rate=5.383666660107974E-4]:5.797821411063E1)[&rate=8.502166395502219E-4]:1.248866424852E1)[&rate=2.727736131135363E-4]:5.172097863495E-1)[&rate=6.096744313777837E-4]:2.709389773062E0,((10[&rate=8.179736159415192E-4]:2.065817202753E1,31[&rate=3.76362758048113E-4]:2.065817202753E1)[&rate=4.550676009090287E-4]:5.200874268765E1,23[&rate=3.903827577656497E-4]:7.266691471519E1)[&rate=6.346109111689322E-4]:1.026563203378E0)[&rate=6.261852979315741E-4]:7.681706781219E-1,(25[&rate=6.698116498372119E-4]:7.175595717201E1,(((((((3[&rate=4.550676009090287E-4]:1.485475975544E0,4[&rate=6.096744313777837E-4]:1.485475975544E0)[&rate=4.900614010507747E-4]:3.317395447924E-1,2[&rate=7.083341148296074E-4]:1.817215520337E0)[&rate=6.983114813870708E-4]:8.043814786787E0,5[&rate=6.518778297756023E-4]:9.861030307124E0)[&rate=7.083341148296074E-4]:1.56589552327E0,((7[&rate=5.697535564440584E-4]:7.431722123165E0,6[&rate=5.935253950057507E-4]:7.431722123165E0)[&rate=6.698116498372119E-4]:1.321928331372E0,1[&rate=3.60346179245397E-4]:8.753650454537E0)[&rate=5.225612398910059E-4]:2.673275375856E0)[&rate=4.2555642015650627E-4]:5.695237015993E1,((30[&rate=5.618996129201723E-4]:4.834371594083E1,26[&rate=8.179736159415192E-4]:4.834371594083E1)[&rate=5.697535564440584E-4]:1.199862707395E1,32[&rate=4.030298328202695E-4]:6.034234301478E1)[&rate=4.983484656092575E-4]:8.03695297554E0)[&rate=4.550676009090287E-4]:1.539624993663E0,(16[&rate=5.145762981897017E-4]:3.456494623149E1,((22[&rate=6.885679176789586E-4]:3.31257556287E0,21[&rate=5.697535564440584E-4]:3.31257556287E0)[&rate=7.18666423536141E-4]:3.075711840989E0,20[&rate=5.383666660107974E-4]:6.388287403858E0)[&rate=9.091768519689211E-4]:2.817665882763E1)[&rate=0.0012249204198859116]:3.53539747525E1)[&rate=7.763765178649494E-4]:9.64331776105E-1,12[&rate=9.910940960290032E-4]:7.088325276009E1)[&rate=6.015613164120359E-4]:8.727044119203E-1)[&rate=6.178778832577042E-4]:2.705691424681E0)[&rate=5.462196981803251E-4]:5.792716983733E0,(17[&rate=9.091768519689211E-4]:7.306897574792E1,(27[&rate=4.983484656092575E-4]:2.714489462683E1,28[&rate=9.599935659988625E-4]:2.714489462683E1)[&rate=5.776340953566392E-4]:4.592408112109E1)[&rate=6.096744313777837E-4]:7.185389832496E0)[&rate=0.0012249204198859116]:4.562697236126E1); +tree STATE_150000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55135.25474421151,EEF_ucld_branchRates=-266.168517335019,lnP=-55135.25474421151,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.976126437311172E-4]:8.508098814262E0,9[&rate=0.0011169361308539915]:8.508098814262E0)[&rate=5.952408781430578E-4]:7.623915652328E0,15[&rate=8.946603677431877E-4]:1.613201446659E1)[&rate=7.454477373680971E-4]:9.796448086946E1,(14[&rate=0.0012353719858917188]:4.871031295476E1,24[&rate=8.787104240997261E-4]:4.871031295476E1)[&rate=0.0011169361308539915]:6.538618238128E1)[&rate=7.693088170676306E-4]:1.177195470676E1,(((((19[&rate=8.344120671957305E-4]:1.520965847346E1,18[&rate=9.471609339631677E-4]:1.520965847346E1)[&rate=3.553782772504842E-4]:6.025118619346E1,((11[&rate=5.952408781430578E-4]:2.278854472493E1,29[&rate=5.639367636636011E-4]:2.278854472493E1)[&rate=7.002966453025849E-4]:5.013327911695E1,(33[&rate=8.072749137576853E-4]:5.77941468467E1,13[&rate=4.6012313097334876E-4]:5.77941468467E1)[&rate=8.072749137576853E-4]:1.512767699518E1)[&rate=4.976126437311172E-4]:2.539020825027E0)[&rate=0.0011902051143932951]:8.020956577205E-1,((10[&rate=4.976126437311172E-4]:2.075316992094E1,31[&rate=9.287867526800754E-4]:2.075316992094E1)[&rate=6.470284654054311E-4]:5.520875683917E1,23[&rate=6.574954755333602E-4]:7.596192676011E1)[&rate=3.7886507347330864E-4]:3.010135645235E-1)[&rate=7.11317048019165E-4]:7.841976889222E-1,(25[&rate=6.574954755333602E-4]:7.598819896385E1,(((((30[&rate=9.871794537992242E-4]:5.5846333256E1,26[&rate=4.976126437311172E-4]:5.5846333256E1)[&rate=0.0012353719858917188]:7.172328816406E0,32[&rate=3.7886507347330864E-4]:6.30186620724E1)[&rate=6.05584317162086E-4]:6.866583719954E0,((((3[&rate=6.159164875850757E-4]:1.658139407558E0,4[&rate=5.425985502541658E-4]:1.658139407558E0)[&rate=9.287867526800754E-4]:5.43327314608E-1,2[&rate=6.680388138338686E-4]:2.201466722166E0)[&rate=9.665732565084096E-4]:7.973784303523E0,5[&rate=5.84866339957599E-4]:1.017525102569E1)[&rate=0.0010583338074744357]:1.993352350368E0,((7[&rate=4.317979677711018E-4]:8.796641894972E0,6[&rate=8.072749137576853E-4]:8.796641894972E0)[&rate=5.639367636636011E-4]:9.061414758897E-1,1[&rate=7.11317048019165E-4]:9.702783370862E0)[&rate=4.160108497642771E-4]:2.465820005195E0)[&rate=4.976126437311172E-4]:5.77166424163E1)[&rate=2.736688548948708E-4]:2.251330369015E0,(16[&rate=5.639367636636011E-4]:3.731451451501E1,((22[&rate=6.574954755333602E-4]:2.511694377931E0,21[&rate=7.11317048019165E-4]:2.511694377931E0)[&rate=9.871794537992242E-4]:4.295085431624E0,20[&rate=7.816451500428929E-4]:6.806779809555E0)[&rate=0.0010327875629773896]:3.050773470546E1)[&rate=8.486483798559837E-4]:3.482206164636E1)[&rate=0.001582218513945725]:1.795427218361E0,12[&rate=9.471609339631677E-4]:7.393200337973E1)[&rate=6.894221068270843E-4]:2.056195584118E0)[&rate=0.0011902051143932951]:1.058939049706E0)[&rate=7.816451500428929E-4]:3.654220523736E0,(17[&rate=6.786753297510117E-4]:6.949951038378E1,(27[&rate=3.7886507347330864E-4]:4.061855879449E1,28[&rate=6.159164875850757E-4]:4.061855879449E1)[&rate=0.0011169361308539915]:2.888095158929E1)[&rate=8.344120671957305E-4]:1.120184815351E1)[&rate=0.001582218513945725]:4.516709150551E1); +tree STATE_160000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55137.459882877614,EEF_ucld_branchRates=-266.168517335019,lnP=-55137.459882877614,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.884055173862778E-4]:7.921746734357E0,9[&rate=0.0010480805395310518]:7.921746734357E0)[&rate=0.0014882381043151705]:4.674762503444E0,15[&rate=3.3851966313607417E-4]:1.25965092378E1)[&rate=8.263717677149479E-4]:9.514696915162E1,(14[&rate=0.001227041546151285]:4.464706784261E1,24[&rate=0.0010152281166156039]:4.464706784261E1)[&rate=0.0011254816920789697]:6.309641054681E1)[&rate=8.651527314576056E-4]:9.23518323056E0,(((((19[&rate=4.478273229468292E-4]:1.428584853306E1,18[&rate=8.452654358979224E-4]:1.428584853306E1)[&rate=2.6665746273748684E-4]:5.505215216631E1,((11[&rate=4.027752668019927E-4]:2.47494548143E1,29[&rate=3.3851966313607417E-4]:2.47494548143E1)[&rate=7.286036960704763E-4]:4.361589378101E1,(33[&rate=9.084684615417787E-4]:6.129984649464E1,13[&rate=5.230504194977317E-4]:6.129984649464E1)[&rate=6.005209713685134E-4]:7.065502100671E0)[&rate=8.861670034658632E-4]:9.726521040616E-1)[&rate=8.861670034658632E-4]:2.444273185563E0,((10[&rate=3.908971691691143E-4]:2.004304453288E1,31[&rate=8.263717677149479E-4]:2.004304453288E1)[&rate=3.234200162909581E-4]:5.072195038575E1,23[&rate=4.143528350004341E-4]:7.076499491863E1)[&rate=7.434042414549303E-4]:1.017278966296E0)[&rate=5.556002401288861E-4]:1.44803738178E0,(25[&rate=7.746109175203108E-4]:7.239207633244E1,(((((30[&rate=6.239682451184576E-4]:5.1759438627E1,26[&rate=6.239682451184576E-4]:5.1759438627E1)[&rate=0.0011723094403718875]:6.970193113285E0,32[&rate=5.016219945738909E-4]:5.872963174029E1)[&rate=4.909323177913883E-4]:8.334924873575E0,((((3[&rate=9.084684615417787E-4]:1.473605446168E0,4[&rate=7.434042414549303E-4]:1.473605446168E0)[&rate=4.027752668019927E-4]:3.358127902428E-1,2[&rate=8.651527314576056E-4]:1.80941823641E0)[&rate=7.003668902342628E-4]:7.789210588994E0,5[&rate=9.577581310515596E-4]:9.598628825405E0)[&rate=5.230504194977317E-4]:1.645384480107E0,((7[&rate=2.6665746273748684E-4]:6.692572704524E0,6[&rate=4.027752668019927E-4]:6.692572704524E0)[&rate=6.239682451184576E-4]:6.743614356224E-1,1[&rate=4.6949724902019556E-4]:7.366934140147E0)[&rate=5.123214608391127E-4]:3.877079165365E0)[&rate=5.44671676778791E-4]:5.582054330835E1)[&rate=5.890731162549076E-4]:9.637342164376E-1,(16[&rate=5.666312933685234E-4]:3.743470492013E1,((22[&rate=7.286036960704763E-4]:3.005815893744E0,21[&rate=2.884055173862778E-4]:3.005815893744E0)[&rate=0.0011254816920789697]:2.783998477258E0,20[&rate=6.608425280162308E-4]:5.789814371002E0)[&rate=6.005209713685134E-4]:3.164489054912E1)[&rate=0.0011254816920789697]:3.059358591017E1)[&rate=5.123214608391127E-4]:3.121837238872E0,12[&rate=6.868494217724936E-4]:7.115012806917E1)[&rate=1.9361905636808153E-4]:1.24194826327E0)[&rate=5.777828214833678E-4]:8.38234934267E-1)[&rate=5.666312933685234E-4]:1.804722283484E0,(17[&rate=7.587218785275288E-4]:6.786021981852E1,(27[&rate=4.8023155237174314E-4]:3.163881365154E1,28[&rate=0.0010845204084174874]:3.163881365154E1)[&rate=7.003668902342628E-4]:3.622140616698E1)[&rate=4.6949724902019556E-4]:7.174813731673E0)[&rate=0.0020496422422981715]:4.194362806978E1); +tree STATE_170000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55145.55524628809,EEF_ucld_branchRates=-266.168517335019,lnP=-55145.55524628809,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.970173960084409E-4]:6.047352946572E0,9[&rate=3.9855736986467845E-4]:6.047352946572E0)[&rate=5.198589896045992E-4]:7.895534039795E0,15[&rate=9.53264312992607E-4]:1.394288698637E1)[&rate=7.654479405815171E-4]:1.052106035376E2,(14[&rate=7.503645185576872E-4]:5.590028368932E1,24[&rate=5.859398809971109E-4]:5.590028368932E1)[&rate=0.0010627259818013247]:6.325320683469E1)[&rate=5.016471818820326E-4]:1.024454291563E1,(((((19[&rate=6.268523209104419E-4]:1.739803774417E1,18[&rate=4.925768132512E-4]:1.739803774417E1)[&rate=2.7720732483382484E-4]:5.644224808483E1,((11[&rate=3.28543678002807E-4]:2.545578646195E1,29[&rate=3.9855736986467845E-4]:2.545578646195E1)[&rate=0.001259533466438718]:4.485826172631E1,(33[&rate=6.716280948333958E-4]:6.559701357574E1,13[&rate=2.7720732483382484E-4]:6.559701357574E1)[&rate=7.812811176537629E-4]:4.717034612518E0)[&rate=5.665110017794647E-4]:3.526237640737E0)[&rate=0.0010627259818013247]:1.829613254206E0,((10[&rate=5.859398809971109E-4]:2.379491297172E1,31[&rate=6.836249452507899E-4]:2.379491297172E1)[&rate=3.4201081856826673E-4]:5.083400367718E1,23[&rate=3.9855736986467845E-4]:7.46289166489E1)[&rate=4.4689663538609065E-4]:1.040982434299E0)[&rate=9.250082708926529E-4]:1.874759928295E0,(25[&rate=6.163197213706916E-4]:7.630844095817E1,(((((30[&rate=6.599836212330334E-4]:5.778788676936E1,26[&rate=5.016471818820326E-4]:5.778788676936E1)[&rate=7.654479405815171E-4]:7.667711539047E0,32[&rate=3.9855736986467845E-4]:6.545559830841E1)[&rate=3.8819104634941473E-4]:6.381103622375E0,((((3[&rate=7.359462898423362E-4]:1.651444742682E0,4[&rate=5.569922789199248E-4]:1.651444742682E0)[&rate=7.979643124063607E-4]:4.968024055091E-1,2[&rate=2.0913430216684025E-4]:2.148247148192E0)[&rate=6.836249452507899E-4]:7.566550542497E0,5[&rate=2.970173960084409E-4]:9.714797690689E0)[&rate=8.544529008397495E-4]:1.498271970988E0,((7[&rate=6.716280948333958E-4]:6.024715085439E0,6[&rate=4.6530971832366646E-4]:6.024715085439E0)[&rate=7.088273206885474E-4]:2.17134955227E0,1[&rate=5.475828698103034E-4]:8.196064637709E0)[&rate=7.979643124063607E-4]:3.017005023968E0)[&rate=4.835087221416463E-4]:6.06236322691E1)[&rate=5.382674968619791E-4]:1.917677164084E0,(16[&rate=4.561406259776432E-4]:4.300015511566E1,((22[&rate=8.156177420313357E-4]:2.734078785058E0,21[&rate=3.28543678002807E-4]:2.734078785058E0)[&rate=5.475828698103034E-4]:3.021873774045E0,20[&rate=9.848912167714449E-4]:5.755952559103E0)[&rate=8.994331684195413E-4]:3.724420255656E1)[&rate=7.979643124063607E-4]:3.07542239792E1)[&rate=6.268523209104419E-4]:1.245095406817E0,12[&rate=9.848912167714449E-4]:7.499947450168E1)[&rate=5.016471818820326E-4]:1.308966456487E0)[&rate=4.6530971832366646E-4]:1.236218053328E0)[&rate=8.156177420313357E-4]:3.134127278253E0,(17[&rate=9.848912167714449E-4]:6.984606132356E1,(27[&rate=5.859398809971109E-4]:3.411548518367E1,28[&rate=5.569922789199248E-4]:3.411548518367E1)[&rate=5.665110017794647E-4]:3.573057613989E1)[&rate=4.561406259776432E-4]:1.083272496619E1)[&rate=0.0016695104492787105]:4.871924714988E1); +tree STATE_180000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55125.69429027552,EEF_ucld_branchRates=-266.168517335019,lnP=-55125.69429027552,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.971395497800755E-4]:6.253273704821E0,9[&rate=9.036134466202992E-4]:6.253273704821E0)[&rate=0.0012724696696561962]:7.05257470291E0,15[&rate=5.141771532369299E-4]:1.330584840773E1)[&rate=7.275627676395374E-4]:1.027075954166E2,(14[&rate=0.0011505224234491344]:5.610021887166E1,24[&rate=5.832690798454651E-4]:5.610021887166E1)[&rate=0.0010321684143659604]:5.991322495265E1)[&rate=6.677253020012031E-4]:1.169089561439E1,(((((19[&rate=6.035316022281004E-4]:1.542213588407E1,18[&rate=5.240077705698487E-4]:1.542213588407E1)[&rate=4.0921045875145335E-4]:5.50737415115E1,((11[&rate=6.035316022281004E-4]:2.282007825634E1,29[&rate=4.943860136635411E-4]:2.282007825634E1)[&rate=0.0010321684143659604]:4.685850694322E1,(33[&rate=8.290504446135658E-4]:5.887317432281E1,13[&rate=3.2210665150803053E-4]:5.887317432281E1)[&rate=5.240077705698487E-4]:1.080541087675E1)[&rate=4.943860136635411E-4]:8.172921960093E-1)[&rate=6.035316022281004E-4]:3.90823693713E0,((10[&rate=6.242668201453694E-4]:2.589161933128E1,31[&rate=5.436386149487397E-4]:2.589161933128E1)[&rate=7.027133078048315E-4]:4.776862200113E1,23[&rate=5.933495780666932E-4]:7.366024133241E1)[&rate=8.642203441319821E-4]:7.438730002859E-1)[&rate=8.461759479507364E-4]:1.369636274036E0,(25[&rate=7.275627676395374E-4]:7.430216928081E1,(((((((2[&rate=3.2210665150803053E-4]:1.338603347314E0,4[&rate=5.043104057722143E-4]:1.338603347314E0)[&rate=5.633478823665603E-4]:1.049000409496E0,3[&rate=9.253141985633919E-4]:2.387603756811E0)[&rate=4.320530021328494E-4]:7.689863478429E0,5[&rate=3.56247680257931E-4]:1.007746723524E1)[&rate=0.0012047087818762648]:8.019434523375E-1,((7[&rate=8.461759479507364E-4]:6.539490782393E0,6[&rate=3.006510977870679E-4]:6.539490782393E0)[&rate=3.8436221464865965E-4]:6.212890447632E-1,1[&rate=4.4295326395600267E-4]:7.160779827156E0)[&rate=5.043104057722143E-4]:3.718630860422E0)[&rate=6.791209324007848E-4]:5.799388599582E1,((30[&rate=8.127354497293808E-4]:5.219106200369E1,26[&rate=5.338220817427386E-4]:5.219106200369E1)[&rate=7.275627676395374E-4]:9.678717482243E0,32[&rate=4.640152160880101E-4]:6.186977948594E1)[&rate=5.933495780666932E-4]:7.003517197462E0)[&rate=6.348546849999437E-4]:2.778304386131E0,(16[&rate=3.006510977870679E-4]:4.011127671469E1,((22[&rate=7.678044023589373E-4]:2.554503394097E0,21[&rate=4.320530021328494E-4]:2.554503394097E0)[&rate=6.348546849999437E-4]:3.889921366476E0,20[&rate=8.642203441319821E-4]:6.444424760573E0)[&rate=9.739576079332769E-4]:3.366685195412E1)[&rate=0.0010321684143659604]:3.154032435484E1)[&rate=5.338220817427386E-4]:1.200117233374E0,12[&rate=8.833135859078092E-4]:7.28517183029E1)[&rate=6.348546849999437E-4]:1.450450977908E0)[&rate=8.642203441319821E-4]:1.471581325923E0)[&rate=7.275627676395374E-4]:3.176034639446E0,(17[&rate=9.739576079332769E-4]:6.604773767096E1,(27[&rate=3.56247680257931E-4]:3.144531207456E1,28[&rate=0.0010663663825882174]:3.144531207456E1)[&rate=7.275627676395374E-4]:3.46024255964E1)[&rate=2.269069642404926E-4]:1.290204757522E1)[&rate=0.0018063392007839666]:4.875455419251E1); +tree STATE_190000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55129.14894650696,EEF_ucld_branchRates=-266.168517335019,lnP=-55129.14894650696,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=0.0011515852891599099]:7.787074895818E0,9[&rate=6.63410290693766E-4]:7.787074895818E0)[&rate=9.175740531288086E-4]:8.414895663188E0,15[&rate=3.2070274572794453E-4]:1.620197055901E1)[&rate=7.240223577978837E-4]:9.784096519393E1,(14[&rate=0.0011068504881737256]:4.89840885624E1,24[&rate=8.81602277525443E-4]:4.89840885624E1)[&rate=8.81602277525443E-4]:6.505884719054E1)[&rate=0.0010080949029905404]:1.326857967044E1,(((((19[&rate=7.939835830913188E-4]:2.102620389182E1,18[&rate=6.167310509773814E-4]:2.102620389182E1)[&rate=6.076214274307669E-4]:4.823391977636E1,((11[&rate=5.161139061189842E-4]:1.942771359686E1,29[&rate=5.349085624283386E-4]:1.942771359686E1)[&rate=6.258964523663972E-4]:4.79486869757E1,(33[&rate=8.495969570197026E-4]:6.18481155949E1,13[&rate=5.532931134588233E-4]:6.18481155949E1)[&rate=0.0010080949029905404]:5.528284977653E0)[&rate=4.545498110314001E-4]:1.883723095624E0)[&rate=9.589528415914706E-4]:3.216148908515E0,((10[&rate=5.62388290091955E-4]:2.718262971481E1,31[&rate=3.699062487805442E-4]:2.718262971481E1)[&rate=2.735907877855544E-4]:4.526599014865E1,23[&rate=4.429415011733281E-4]:7.244861986347E1)[&rate=0.0011068504881737256]:2.765271322373E-2)[&rate=3.485928451376872E-4]:1.323420767029E0,(25[&rate=7.240223577978837E-4]:7.336461112081E1,(((((((2[&rate=7.460109320151391E-4]:1.200452696241E0,4[&rate=6.928776160911677E-4]:1.200452696241E0)[&rate=6.444530163564371E-4]:9.180720546878E-1,3[&rate=8.495969570197026E-4]:2.118524750929E0)[&rate=4.763111897783547E-4]:7.262945935231E0,5[&rate=5.255751753421773E-4]:9.38147068616E0)[&rate=6.63410290693766E-4]:1.259082155194E0,((7[&rate=5.349085624283386E-4]:6.755755396992E0,1[&rate=5.62388290091955E-4]:6.755755396992E0)[&rate=4.6564027998995E-4]:1.125916009624E0,6[&rate=8.990172874573935E-4]:7.881671406616E0)[&rate=3.699062487805442E-4]:2.758881434738E0)[&rate=5.804800970550199E-4]:5.522868733865E1,((30[&rate=8.65171552949532E-4]:4.823286090809E1,26[&rate=6.351322043836783E-4]:4.823286090809E1)[&rate=0.0012071357840746384]:7.752001058909E0,32[&rate=3.877498903980923E-4]:5.5984861967E1)[&rate=6.258964523663972E-4]:9.884378213007E0)[&rate=6.351322043836783E-4]:5.150036964326E0,(16[&rate=4.034213061536148E-4]:3.711604455476E1,((22[&rate=6.351322043836783E-4]:3.339605022515E0,21[&rate=8.206103970762829E-4]:3.339605022515E0)[&rate=4.763111897783547E-4]:4.284578731121E0,20[&rate=5.62388290091955E-4]:7.624183753637E0)[&rate=9.374691992090216E-4]:2.949186080113E1)[&rate=8.347727088695304E-4]:3.390323258957E1)[&rate=7.348770953385911E-4]:9.100862327201E-1,12[&rate=8.65171552949532E-4]:7.192936337705E1)[&rate=6.53873892318384E-4]:1.435247743761E0)[&rate=7.460109320151391E-4]:4.350822229047E-1)[&rate=8.495969570197026E-4]:3.12099217708E0,(17[&rate=6.928776160911677E-4]:6.904359863915E1,(27[&rate=5.349085624283386E-4]:3.524033106874E1,28[&rate=5.62388290091955E-4]:3.524033106874E1)[&rate=0.0010080949029905404]:3.380326757041E1)[&rate=7.240223577978837E-4]:7.877086881651E0)[&rate=0.0016320983366070294]:5.039082990257E1); +tree STATE_200000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55149.18880056645,EEF_ucld_branchRates=-266.168517335019,lnP=-55149.18880056645,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.7275038035997954E-4]:6.856053057716E0,9[&rate=7.320150740825299E-4]:6.856053057716E0)[&rate=4.5022144464112703E-4]:8.295163281177E0,15[&rate=6.991683304803039E-4]:1.515121633889E1)[&rate=8.650612259779344E-4]:1.043568902692E2,(14[&rate=0.0011402320080223008]:4.887538333157E1,24[&rate=6.287512285973973E-4]:4.887538333157E1)[&rate=8.991154140994147E-4]:7.063272327653E1)[&rate=5.622917499724436E-4]:8.036687013988E0,(((((19[&rate=8.991154140994147E-4]:1.549486358782E1,18[&rate=9.58688532789412E-4]:1.549486358782E1)[&rate=3.9748083314118036E-4]:5.431569517681E1,((11[&rate=4.7275038035997954E-4]:2.08186150534E1,29[&rate=5.336354828909927E-4]:2.08186150534E1)[&rate=5.811921194230341E-4]:4.685376032599E1,(33[&rate=7.098852295119579E-4]:6.113838764594E1,13[&rate=3.630667555017946E-4]:6.113838764594E1)[&rate=6.384417504144038E-4]:6.533987733447E0)[&rate=6.581253152042919E-4]:2.138183385238E0)[&rate=3.412523998682846E-4]:2.182323432326E0,((10[&rate=5.336354828909927E-4]:2.994963483762E1,31[&rate=5.140733318570403E-4]:2.994963483762E1)[&rate=5.622917499724436E-4]:4.1144296752E1,23[&rate=4.5022144464112703E-4]:7.109393158962E1)[&rate=6.48227828356583E-4]:8.989506073351E-1)[&rate=8.198629336332425E-4]:1.796626178502E0,(25[&rate=8.342678267347649E-4]:7.272096021552E1,(12[&rate=0.0011402320080223008]:6.781524835922E1,((((30[&rate=6.48227828356583E-4]:4.810042734464E1,26[&rate=6.581253152042919E-4]:4.810042734464E1)[&rate=6.000987051427977E-4]:9.70639863462E0,32[&rate=3.630667555017946E-4]:5.780682597926E1)[&rate=5.811921194230341E-4]:6.5854078574E0,((((2[&rate=3.412523998682846E-4]:1.570815801454E0,4[&rate=4.382230088173755E-4]:1.570815801454E0)[&rate=7.320150740825299E-4]:5.943272628567E-1,3[&rate=0.0010342231224828718]:2.165143064311E0)[&rate=8.816259090619043E-4]:7.999436387349E0,5[&rate=7.320150740825299E-4]:1.016457945166E1)[&rate=0.0010342231224828718]:9.194666146185E-1,((7[&rate=8.991154140994147E-4]:7.074020236272E0,1[&rate=6.384417504144038E-4]:7.074020236272E0)[&rate=2.649809625366566E-4]:8.25653200283E-1,6[&rate=8.650612259779344E-4]:7.899673436555E0)[&rate=7.320150740825299E-4]:3.184372629723E0)[&rate=8.493070327100529E-4]:5.330818777038E1)[&rate=8.991154140994147E-4]:2.843374759093E0,(16[&rate=3.630667555017946E-4]:3.615749680325E1,((22[&rate=6.191407589399554E-4]:2.756765262722E0,21[&rate=7.552430369185652E-4]:2.756765262722E0)[&rate=6.783206979978573E-4]:5.013658841653E0,20[&rate=5.336354828909927E-4]:7.770424104375E0)[&rate=9.58688532789412E-4]:2.838707269888E1)[&rate=8.650612259779344E-4]:3.10781117925E1)[&rate=0.0011402320080223008]:5.796397634673E-1)[&rate=9.374550802343306E-4]:4.905711856296E0)[&rate=9.58688532789412E-4]:1.068548159937E0)[&rate=6.581253152042919E-4]:4.606342062564E0,(17[&rate=7.43477806634759E-4]:7.165587613499E1,(27[&rate=5.622917499724436E-4]:3.155576386607E1,28[&rate=0.00118839238535153]:3.155576386607E1)[&rate=5.239170996371831E-4]:4.010011226892E1)[&rate=5.528001693093845E-4]:6.739974303033E0)[&rate=0.001710388415017734]:4.914894318406E1); +tree STATE_210000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55131.00297514561,EEF_ucld_branchRates=-266.168517335019,lnP=-55131.00297514561,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.253315122472508E-4]:9.447829778114E0,9[&rate=5.360128873217232E-4]:9.447829778114E0)[&rate=7.378788998640604E-4]:7.904737727204E0,15[&rate=5.812818227671468E-4]:1.735256750532E1)[&rate=8.440238147060673E-4]:1.024249065072E2,(14[&rate=0.0011016511661915188]:4.776288990055E1,24[&rate=8.581696771598779E-4]:4.776288990055E1)[&rate=9.417463969622246E-4]:7.201458411192E1)[&rate=7.276719426185755E-4]:5.942538493057E0,(((((19[&rate=8.050281348267193E-4]:2.054817899594E1,18[&rate=8.581696771598779E-4]:2.054817899594E1)[&rate=4.75430353769822E-4]:5.251302640409E1,((11[&rate=4.6395752945200505E-4]:2.077484124187E1,29[&rate=7.078713575256338E-4]:2.077484124187E1)[&rate=6.610639300714554E-4]:5.069205472068E1,(33[&rate=0.001008601416909044]:6.165183465475E1,13[&rate=3.9136927409057004E-4]:6.165183465475E1)[&rate=5.724012184516518E-4]:9.815061307807E0)[&rate=4.968940928262263E-4]:1.594309437482E0)[&rate=9.84262401170682E-4]:3.416742542632E0,((10[&rate=7.483202308312411E-4]:2.90063111711E1,31[&rate=5.544253769117588E-4]:2.90063111711E1)[&rate=3.9136927409057004E-4]:4.643073539413E1,23[&rate=6.520323040696031E-4]:7.543704656523E1)[&rate=8.581696771598779E-4]:1.040901377439E0)[&rate=4.863761248482734E-4]:2.482686579517E0,(25[&rate=9.052304509158072E-4]:7.681854018669E1,(12[&rate=7.378788998640604E-4]:7.469939813536E1,((16[&rate=3.4202198513406056E-4]:3.82946815673E1,((22[&rate=0.0011436465822266231]:2.751891075102E0,21[&rate=5.812818227671468E-4]:2.751891075102E0)[&rate=8.886637913627453E-4]:5.701290477978E0,20[&rate=6.341802451284649E-4]:8.453181553079E0)[&rate=9.417463969622246E-4]:2.984150001422E1)[&rate=0.0011016511661915188]:3.375778789282E1,(((((2[&rate=5.452863624121417E-4]:1.954362268105E0,4[&rate=6.701851176869768E-4]:1.954362268105E0)[&rate=7.378788998640604E-4]:7.218146572144E-1,3[&rate=3.4202198513406056E-4]:2.676176925319E0)[&rate=8.581696771598779E-4]:7.512660330081E0,5[&rate=8.440238147060673E-4]:1.01888372554E1)[&rate=6.610639300714554E-4]:2.383065723507E0,((7[&rate=7.276719426185755E-4]:8.047409514781E0,6[&rate=7.483202308312411E-4]:8.047409514781E0)[&rate=3.9136927409057004E-4]:1.098683193165E0,1[&rate=6.701851176869768E-4]:9.146092707946E0)[&rate=5.544253769117588E-4]:3.425810270961E0)[&rate=5.812818227671468E-4]:5.758406410722E1,((30[&rate=5.989231445345781E-4]:4.993950000136E1,26[&rate=6.077175852572532E-4]:4.993950000136E1)[&rate=6.520323040696031E-4]:1.19357456938E1,32[&rate=3.9136927409057004E-4]:6.187524569515E1)[&rate=6.701851176869768E-4]:8.280721390973E0)[&rate=8.730167364614912E-4]:1.896502373997E0)[&rate=6.794106933901177E-4]:2.646928675238E0)[&rate=4.6395752945200505E-4]:2.119142051327E0)[&rate=8.886637913627453E-4]:2.142094335499E0)[&rate=3.9136927409057004E-4]:3.741364607414E0,(17[&rate=8.886637913627453E-4]:7.565486977397E1,(27[&rate=5.452863624121417E-4]:3.300967514365E1,28[&rate=0.0011436465822266231]:3.300967514365E1)[&rate=6.430758068078994E-4]:4.264519463032E1)[&rate=9.621118259801296E-4]:7.047129355631E0)[&rate=0.0015896361235236663]:4.301801337592E1); +tree STATE_220000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55134.321723076086,EEF_ucld_branchRates=-266.168517335019,lnP=-55134.321723076086,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.868066732579518E-4]:1.025060448302E1,9[&rate=3.7099368123750067E-4]:1.025060448302E1)[&rate=2.838426851924642E-4]:7.599511438094E0,15[&rate=4.765390606058314E-4]:1.785011592111E1)[&rate=8.33695512946248E-4]:9.899398465325E1,(14[&rate=0.0011903955275399374]:4.735628124582E1,24[&rate=0.0012665630298399392]:4.735628124582E1)[&rate=7.868066732579518E-4]:6.948781932854E1)[&rate=7.076915004266004E-4]:6.417466512051E0,(((((19[&rate=2.3046646495839007E-4]:2.096639551267E1,18[&rate=7.654225547747428E-4]:2.096639551267E1)[&rate=3.069394572511193E-4]:5.245011193559E1,((11[&rate=1.7121613648385853E-4]:2.085667552775E1,29[&rate=8.875553308308187E-4]:2.085667552775E1)[&rate=5.341944467133915E-4]:5.107993624553E1,(33[&rate=7.868066732579518E-4]:5.662793420755E1,13[&rate=4.1246829156241064E-4]:5.662793420755E1)[&rate=4.020741836847945E-4]:1.530867756573E1)[&rate=4.989828567459821E-4]:1.479895674988E0)[&rate=4.020741836847945E-4]:2.483397232442E0,((10[&rate=4.876714259147339E-4]:3.120948170168E1,31[&rate=6.125422410559622E-4]:3.120948170168E1)[&rate=3.8135837820993217E-4]:4.317197335437E1,23[&rate=6.269784317587147E-4]:7.438145505605E1)[&rate=1.335157190543648E-4]:1.518449624656E0)[&rate=3.069394572511193E-4]:1.015061498972E0,(25[&rate=6.125422410559622E-4]:7.551129638352E1,(12[&rate=7.654225547747428E-4]:7.417226719989E1,((16[&rate=2.3046646495839007E-4]:3.89901002543E1,((22[&rate=9.178637626920087E-4]:2.601136591827E0,21[&rate=4.440287602945656E-4]:2.601136591827E0)[&rate=5.464308098485543E-4]:6.697665878744E0,20[&rate=5.464308098485543E-4]:9.298802470571E0)[&rate=0.0011903955275399374]:2.969129778373E1)[&rate=8.596185882053694E-4]:3.418768077616E1,(((((2[&rate=3.8135837820993217E-4]:1.823047104644E0,4[&rate=2.838426851924642E-4]:1.823047104644E0)[&rate=2.9557301897618183E-4]:8.876139168213E-1,3[&rate=5.104931365307473E-4]:2.710661021466E0)[&rate=4.765390606058314E-4]:7.097861605286E0,5[&rate=5.718006438204436E-4]:9.808522626752E0)[&rate=0.0010283876223065997]:2.896146350433E0,((7[&rate=2.140820639660861E-4]:6.890028910286E0,6[&rate=6.125422410559622E-4]:6.890028910286E0)[&rate=6.125422410559622E-4]:1.722170571415E0,1[&rate=2.140820639660861E-4]:8.6121994817E0)[&rate=4.440287602945656E-4]:4.092469495485E0)[&rate=4.3342708396826285E-4]:5.874530745667E1,((30[&rate=7.868066732579518E-4]:4.955791517637E1,26[&rate=8.33695512946248E-4]:4.955791517637E1)[&rate=9.510028679544571E-4]:1.453306352546E1,32[&rate=3.9171111794382744E-4]:6.409097870183E1)[&rate=4.989828567459821E-4]:7.358997732029E0)[&rate=5.104931365307473E-4]:1.727804596602E0)[&rate=0.0012665630298399392]:9.944861694346E-1)[&rate=2.140820639660861E-4]:1.339029183631E0)[&rate=5.985593754784308E-4]:1.403669796158E0)[&rate=8.33695512946248E-4]:3.551843478628E0,(17[&rate=7.868066732579518E-4]:6.806920426438E1,(27[&rate=4.765390606058314E-4]:3.332034268593E1,28[&rate=0.0010283876223065997]:3.332034268593E1)[&rate=6.125422410559622E-4]:3.474886157845E1)[&rate=3.7099368123750067E-4]:1.239760539393E1)[&rate=0.0021862617091201316]:4.27947574281E1); +tree STATE_230000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55116.46428828211,EEF_ucld_branchRates=-266.168517335019,lnP=-55116.46428828211,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.864651165502172E-4]:8.946872753087E0,9[&rate=0.0014716887443197689]:8.946872753087E0)[&rate=2.9492687408259004E-4]:7.998664511705E0,15[&rate=4.86434263879698E-4]:1.694553726479E1)[&rate=9.919373054448285E-4]:9.789587979325E1,(14[&rate=0.0013880534066486683]:4.219279614953E1,24[&rate=0.0010522820643693357]:4.219279614953E1)[&rate=0.0010522820643693357]:7.264862090851E1)[&rate=0.0013880534066486683]:3.574456501522E0,(((((19[&rate=7.416445003095864E-4]:1.776595165597E1,18[&rate=2.9492687408259004E-4]:1.776595165597E1)[&rate=3.7295002432413227E-4]:5.417990729825E1,((33[&rate=6.802840492363963E-4]:6.285386287326E1,13[&rate=4.621271993041141E-4]:6.285386287326E1)[&rate=3.5897132409963144E-4]:6.066964166444E0,(11[&rate=4.985653507781451E-4]:1.794032466764E1,29[&rate=3.290596641721155E-4]:1.794032466764E1)[&rate=7.416445003095864E-4]:5.098050237207E1)[&rate=0.001021008341899421]:3.025031914517E0)[&rate=5.229063395180507E-4]:2.864772259616E0,((10[&rate=7.58122347985199E-4]:2.382916860985E1,31[&rate=9.151237982927407E-4]:2.382916860985E1)[&rate=5.107149970086742E-4]:4.988005551917E1,23[&rate=3.1269730610201403E-4]:7.370922412902E1)[&rate=9.392231438408163E-4]:1.101407084822E0)[&rate=8.300541190317287E-4]:1.628475552785E0,(25[&rate=7.416445003095864E-4]:7.499727577167E1,(12[&rate=0.0011231041105578346]:7.129137640541E1,((16[&rate=3.996146343014295E-4]:3.84143092485E1,((22[&rate=5.981295680598041E-4]:2.345592507696E0,21[&rate=9.151237982927407E-4]:2.345592507696E0)[&rate=6.112086770117548E-4]:4.883214018256E0,20[&rate=9.151237982927407E-4]:7.228806525952E0)[&rate=0.0013880534066486683]:3.118550272255E1)[&rate=0.001021008341899421]:3.153878034622E1,(((((2[&rate=1.7622513012758545E-4]:1.746525250549E0,4[&rate=7.416445003095864E-4]:1.746525250549E0)[&rate=6.51817208154736E-4]:1.695301949657E0,3[&rate=7.101348153413308E-4]:3.441827200206E0)[&rate=4.86434263879698E-4]:8.987770922479E0,5[&rate=2.5202392243665493E-4]:1.242959812268E1)[&rate=2.7510662273445163E-4]:1.399585126487E0,((7[&rate=6.658930687232239E-4]:7.936042114342E0,6[&rate=6.51817208154736E-4]:7.936042114342E0)[&rate=7.416445003095864E-4]:1.233361347768E0,1[&rate=4.621271993041141E-4]:9.169403462111E0)[&rate=6.112086770117548E-4]:4.659779787061E0)[&rate=4.742970970643641E-4]:5.295448077112E1,((30[&rate=9.392231438408163E-4]:5.207569280839E1,26[&rate=5.599476909135095E-4]:5.207569280839E1)[&rate=0.0013880534066486683]:8.448477097462E0,32[&rate=5.981295680598041E-4]:6.052416990585E1)[&rate=6.380284257318137E-4]:6.259494114445E0)[&rate=5.475015856202499E-4]:3.169425574422E0)[&rate=9.647591112933375E-4]:1.338286810697E0)[&rate=6.112086770117548E-4]:3.705899366254E0)[&rate=9.919373054448285E-4]:1.441830994959E0)[&rate=5.725204673602834E-4]:2.571027976229E0,(17[&rate=9.151237982927407E-4]:6.537177201407E1,(27[&rate=2.5202392243665493E-4]:2.637320225588E1,28[&rate=0.001260280352847822]:2.637320225588E1)[&rate=5.852407195139706E-4]:3.899856975818E1)[&rate=5.351614300644995E-4]:1.363836272879E1)[&rate=0.0019479078257069115]:3.940573881671E1); +tree STATE_240000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55155.69876349511,EEF_ucld_branchRates=-266.168517335019,lnP=-55155.69876349511,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.8251464750050126E-4]:7.376085177547E0,9[&rate=6.678503681732938E-4]:7.376085177547E0)[&rate=4.158894016665897E-4]:9.852725304484E0,15[&rate=6.076994415428504E-4]:1.722881048203E1)[&rate=7.779820997898537E-4]:9.912635252906E1,(14[&rate=9.432701328890578E-4]:4.636291863351E1,24[&rate=8.74475454513574E-4]:4.636291863351E1)[&rate=7.779820997898537E-4]:6.999224437758E1)[&rate=7.387833899944934E-4]:1.039827694925E1,(((((19[&rate=7.674988549336909E-4]:1.819234881337E1,18[&rate=6.897135604064218E-4]:1.819234881337E1)[&rate=4.158894016665897E-4]:5.395076714092E1,((33[&rate=9.167010157627459E-4]:6.291553049837E1,13[&rate=5.493522205150319E-4]:6.291553049837E1)[&rate=4.538967355827217E-4]:7.643435953195E0,(11[&rate=5.820122485848653E-4]:1.878494072344E1,29[&rate=6.141526479412304E-4]:1.878494072344E1)[&rate=7.387833899944934E-4]:5.177402572812E1)[&rate=8.007450681052182E-4]:1.584149502724E0)[&rate=5.357712051386123E-4]:3.617548543062E0,((10[&rate=5.357712051386123E-4]:2.571620465192E1,31[&rate=5.493522205150319E-4]:2.571620465192E1)[&rate=5.755689718723143E-4]:4.985089782615E1,23[&rate=4.3026094182591046E-4]:7.556710247808E1)[&rate=8.007450681052182E-4]:1.935620192745E-1)[&rate=5.755689718723143E-4]:2.925973442096E0,(25[&rate=6.076994415428504E-4]:7.773383525319E1,(12[&rate=7.779820997898537E-4]:7.682030100078E1,((16[&rate=6.749927897987759E-4]:3.438891048061E1,((22[&rate=7.575104669316774E-4]:3.208848773241E0,21[&rate=7.779820997898537E-4]:3.208848773241E0)[&rate=5.426153786063185E-4]:4.313488182638E0,20[&rate=5.884360103547109E-4]:7.522336955879E0)[&rate=6.337507336541638E-4]:2.686657352473E1)[&rate=7.575104669316774E-4]:4.015334495018E1,(((((3[&rate=4.990635943761076E-4]:3.259901371985E0,4[&rate=6.608329332025198E-4]:3.259901371985E0)[&rate=5.56000278946673E-4]:6.03365193068E-1,2[&rate=6.20638808871782E-4]:3.863266565053E0)[&rate=9.167010157627459E-4]:8.700582784871E0,5[&rate=6.539267122384268E-4]:1.256384934992E1)[&rate=6.403973584897976E-4]:1.798458470608E0,((7[&rate=4.538967355827217E-4]:8.725549855568E0,6[&rate=5.884360103547109E-4]:8.725549855568E0)[&rate=6.471188731100808E-4]:8.913265284773E-1,1[&rate=3.3459431809514713E-4]:9.616876384045E0)[&rate=6.012690830284092E-4]:4.745431436488E0)[&rate=7.131545783796651E-4]:5.895297231644E1,((30[&rate=7.479557560928514E-4]:5.247376179064E1,26[&rate=6.141526479412304E-4]:5.247376179064E1)[&rate=6.749927897987759E-4]:1.274732173089E1,32[&rate=4.7359670386047534E-4]:6.522108352153E1)[&rate=3.984669951725629E-4]:8.094196615441E0)[&rate=3.984669951725629E-4]:1.226975293818E0)[&rate=8.941511668993531E-4]:2.278045569988E0)[&rate=5.56000278946673E-4]:9.135342524058E-1)[&rate=6.608329332025198E-4]:9.528026862618E-1)[&rate=4.6410941974220723E-4]:1.351545062826E0,(17[&rate=8.266241431077436E-4]:6.861746520088E1,(27[&rate=7.479557560928514E-4]:2.598892152779E1,28[&rate=9.167010157627459E-4]:2.598892152779E1)[&rate=6.141526479412304E-4]:4.262854367309E1)[&rate=6.822751016449409E-4]:1.142071780139E1)[&rate=0.001081661778119477]:4.671525695806E1); +tree STATE_250000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55123.874381520814,EEF_ucld_branchRates=-266.168517335019,lnP=-55123.874381520814,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.899554123116986E-4]:8.010468338601E0,9[&rate=7.099213264092859E-4]:8.010468338601E0)[&rate=2.1992470668310922E-4]:7.975263268359E0,15[&rate=3.268362702723446E-4]:1.598573160696E1)[&rate=8.576699026449706E-4]:1.018776668372E2,(14[&rate=0.0011605423745626728]:4.014191434318E1,24[&rate=0.0011057636595465377]:4.014191434318E1)[&rate=8.576699026449706E-4]:7.772148410102E1)[&rate=3.9200346368564823E-4]:8.521675449711E0,(((((19[&rate=9.131384810748684E-4]:1.509672965281E1,18[&rate=8.093835734402907E-4]:1.509672965281E1)[&rate=2.1992470668310922E-4]:5.249593940774E1,((33[&rate=9.784856722388653E-4]:5.665235979749E1,13[&rate=4.4558537495710846E-4]:5.665235979749E1)[&rate=5.130558376650936E-4]:8.75897244407E0,(11[&rate=3.813384350165942E-4]:1.423716787937E1,29[&rate=4.1332044153065964E-4]:1.423716787937E1)[&rate=0.0012250848059085057]:5.117416436219E1)[&rate=3.7063634195001483E-4]:2.181336818987E0)[&rate=1.7584770513154522E-4]:3.708359566429E0,((10[&rate=8.093835734402907E-4]:2.331514079669E1,31[&rate=8.093835734402907E-4]:2.331514079669E1)[&rate=4.786624901211511E-4]:4.747798077248E1,23[&rate=4.1332044153065964E-4]:7.079312156917E1)[&rate=2.791275174935962E-4]:5.079070578027E-1)[&rate=6.448156510984158E-4]:1.754779604584E0,(25[&rate=8.327544557556757E-4]:7.208272140579E1,(12[&rate=7.873631072590932E-4]:6.936023906671E1,((16[&rate=5.014133335006029E-4]:3.30690456666E1,((22[&rate=5.492997768246529E-4]:2.966832479535E0,21[&rate=8.576699026449706E-4]:2.966832479535E0)[&rate=4.899554123116986E-4]:3.865748925843E0,20[&rate=4.6751556386902076E-4]:6.832581405379E0)[&rate=0.001403430609861371]:2.623646426123E1)[&rate=8.576699026449706E-4]:3.43967220913E1,(((((3[&rate=2.659524305091982E-4]:2.326198315454E0,4[&rate=8.327544557556757E-4]:2.326198315454E0)[&rate=2.0039513869275685E-4]:2.209515542693E-1,2[&rate=5.618954863008907E-4]:2.547149869723E0)[&rate=5.88011293185396E-4]:8.210045494478E0,5[&rate=4.0265649202691085E-4]:1.07571953642E1)[&rate=3.154354468140976E-4]:2.593063080144E0,((7[&rate=2.659524305091982E-4]:7.863635979999E0,6[&rate=5.747900226721453E-4]:7.863635979999E0)[&rate=5.618954863008907E-4]:1.484599041646E0,1[&rate=2.1992470668310922E-4]:9.348235021644E0)[&rate=5.014133335006029E-4]:4.002023422701E0)[&rate=4.564960091575508E-4]:5.309789312895E1,((30[&rate=5.88011293185396E-4]:4.865557967504E1,26[&rate=4.6751556386902076E-4]:4.865557967504E1)[&rate=6.448156510984158E-4]:8.996540285965E0,32[&rate=4.240166239193767E-4]:5.7652119961E1)[&rate=5.249032948871343E-4]:8.796031612296E0)[&rate=0.0012250848059085057]:1.017616184606E0)[&rate=8.576699026449706E-4]:1.894471308809E0)[&rate=2.3677456875292215E-4]:2.722482339077E0)[&rate=6.299533742623575E-4]:9.730868257685E-1)[&rate=7.665319480388039E-4]:2.307306675406E0,(17[&rate=6.299533742623575E-4]:6.814946361734E1,(27[&rate=2.916754413793474E-4]:2.169840121466E1,28[&rate=0.0017552066715512142]:2.169840121466E1)[&rate=6.155581525306367E-4]:4.645106240268E1)[&rate=5.747900226721453E-4]:7.213651289622E0)[&rate=0.0011605423745626728]:5.102195898695E1); +tree STATE_260000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.334655926505,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.334655926505,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.809250666934111E-4]:9.662700351991E0,9[&rate=5.809250666934111E-4]:9.662700351991E0)[&rate=5.809250666934111E-4]:6.172952570053E0,15[&rate=8.292344534019142E-4]:1.583565292204E1)[&rate=8.640114645821435E-4]:9.752992659755E1,(14[&rate=9.250504104408812E-4]:4.566547331292E1,24[&rate=8.461399938488513E-4]:4.566547331292E1)[&rate=0.001070627032288432]:6.770010620667E1)[&rate=0.0010345475242634228]:1.662895304114E1,(((((19[&rate=7.691530363702429E-4]:1.191548328379E1,18[&rate=9.03265830542768E-4]:1.191548328379E1)[&rate=3.292126870354316E-4]:5.928238950981E1,((33[&rate=8.292344534019142E-4]:5.781635726456E1,13[&rate=4.139029439435232E-4]:5.781635726456E1)[&rate=3.292126870354316E-4]:1.190857798178E1,(11[&rate=8.829939145816595E-4]:1.219832246011E1,29[&rate=5.149293116074142E-4]:1.219832246011E1)[&rate=0.0011125076546165285]:5.752661278623E1)[&rate=6.611383920080252E-4]:1.47293754726E0)[&rate=4.8635113474753463E-4]:1.797790622777E0,((10[&rate=4.2513758108681394E-4]:2.429794011766E1,31[&rate=6.299749185445351E-4]:2.429794011766E1)[&rate=3.898314073787122E-4]:4.828703894789E1,23[&rate=6.0021320215644E-4]:7.258497906555E1)[&rate=5.619333843934563E-4]:4.106843508257E-1)[&rate=0.0010345475242634228]:1.880518636669E0,(25[&rate=6.82950813972212E-4]:7.40455063634E1,(((16[&rate=5.809250666934111E-4]:3.616424578997E1,((22[&rate=8.640114645821435E-4]:2.116227142917E0,21[&rate=6.505641442637092E-4]:2.116227142917E0)[&rate=2.8093616441165575E-4]:7.514593712576E0,20[&rate=7.058089541823855E-4]:9.630820855493E0)[&rate=0.0012250412370662003]:2.653342493447E1)[&rate=0.0011125076546165285]:3.262149192011E1,12[&rate=8.292344534019142E-4]:6.878573771008E1)[&rate=4.7663403256626493E-4]:2.927315398849E0,(((30[&rate=6.942360392181486E-4]:5.144030241246E1,26[&rate=4.021762909696626E-4]:5.144030241246E1)[&rate=8.292344534019142E-4]:1.164333091929E1,32[&rate=5.243418387672317E-4]:6.308363333175E1)[&rate=2.3547687063467154E-4]:7.471849323344E0,((((2[&rate=6.611383920080252E-4]:2.181103920635E0,4[&rate=6.299749185445351E-4]:2.181103920635E0)[&rate=6.942360392181486E-4]:1.116675290483E0,3[&rate=6.100071063168226E-4]:3.297779211117E0)[&rate=8.131752931324965E-4]:6.966446666251E0,5[&rate=3.4690244408066564E-4]:1.026422587737E1)[&rate=6.505641442637092E-4]:2.510177664722E0,((7[&rate=5.149293116074142E-4]:8.231111619586E0,6[&rate=6.299749185445351E-4]:8.231111619586E0)[&rate=4.95955940606843E-4]:1.621865126169E0,1[&rate=3.898314073787122E-4]:9.852976745755E0)[&rate=5.431149481110663E-4]:2.921426796335E0)[&rate=5.809250666934111E-4]:5.778107911301E1)[&rate=8.640114645821435E-4]:1.15757045383E0)[&rate=3.082072809575134E-4]:2.332453254472E0)[&rate=6.82950813972212E-4]:8.306756896436E-1)[&rate=5.149293116074142E-4]:2.894113703585E0,(17[&rate=8.829939145816595E-4]:6.720925448032E1,(27[&rate=4.139029439435232E-4]:2.178456098355E1,28[&rate=0.0014355542947928142]:2.178456098355E1)[&rate=5.525103202286241E-4]:4.542469349677E1)[&rate=5.713998313480698E-4]:1.056104127631E1)[&rate=8.461399938488513E-4]:5.22242368041E1); +tree STATE_270000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55165.28615315586,EEF_ucld_branchRates=-266.168517335019,lnP=-55165.28615315586,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.006551510069631E-4]:9.216222644659E0,9[&rate=7.891698438365708E-4]:9.216222644659E0)[&rate=3.3944522902782965E-4]:6.547491775745E0,15[&rate=5.294908568002557E-4]:1.57637144204E1)[&rate=4.543132114766331E-4]:1.00779241961E2,(14[&rate=0.0012700445383579026]:5.201211307272E1,24[&rate=8.090773886847943E-4]:5.201211307272E1)[&rate=7.361743943246848E-4]:6.453084330864E1)[&rate=7.528646949061466E-4]:1.271435523959E1,(((((19[&rate=5.80673933694278E-4]:1.155072879778E1,18[&rate=5.596243809637789E-4]:1.155072879778E1)[&rate=2.610936702063594E-4]:5.77562917866E1,((11[&rate=5.006551510069631E-4]:1.2024123401E1,29[&rate=6.258683406009913E-4]:1.2024123401E1)[&rate=6.141183967746332E-4]:5.725551857074E1,(33[&rate=9.70177762278766E-4]:6.001039094335E1,13[&rate=3.169125810008145E-4]:6.001039094335E1)[&rate=6.906715373469237E-4]:9.2692510284E0)[&rate=9.70177762278766E-4]:2.737861264032E-2)[&rate=5.80673933694278E-4]:3.338295021092E0,((10[&rate=8.090773886847943E-4]:2.168219941995E1,31[&rate=5.006551510069631E-4]:2.168219941995E1)[&rate=4.360145056883491E-4]:4.962545211304E1,23[&rate=4.634815603983628E-4]:7.130765153299E1)[&rate=0.0014123522753192602]:1.337664072489E0)[&rate=4.8193742859150077E-4]:3.132275669043E0,(25[&rate=4.8193742859150077E-4]:7.508448052232E1,(12[&rate=8.534053373149784E-4]:7.410475478344E1,((16[&rate=6.141183967746332E-4]:3.244440042208E1,((22[&rate=7.891698438365708E-4]:2.847277696044E0,21[&rate=5.80673933694278E-4]:2.847277696044E0)[&rate=5.393684881770637E-4]:5.89875776013E0,20[&rate=4.360145056883491E-4]:8.746035456174E0)[&rate=8.090773886847943E-4]:2.369836496591E1)[&rate=0.0010544401063953448]:4.092655644181E1,(((((2[&rate=2.772388077716147E-4]:1.525125913076E0,4[&rate=7.528646949061466E-4]:1.525125913076E0)[&rate=3.9904892903399285E-4]:7.897437205593E-1,3[&rate=5.596243809637789E-4]:2.314869633635E0)[&rate=4.912559379151812E-4]:8.037542741969E0,5[&rate=3.5002817467388273E-4]:1.03524123756E1)[&rate=7.528646949061466E-4]:2.616619617046E0,((7[&rate=2.610936702063594E-4]:6.832593571786E0,6[&rate=5.494069757001138E-4]:6.832593571786E0)[&rate=3.3944522902782965E-4]:8.729201489217E-1,1[&rate=3.284435843723082E-4]:7.705513720708E0)[&rate=3.0470020509434296E-4]:5.263518271942E0)[&rate=4.083888389954144E-4]:5.931912171135E1,((30[&rate=5.700398621960739E-4]:5.16233225992E1,26[&rate=6.026881153401965E-4]:5.16233225992E1)[&rate=8.090773886847943E-4]:8.589691454786E0,32[&rate=4.268491568816995E-4]:6.021301405399E1)[&rate=2.17694653130259E-4]:1.207513965001E1)[&rate=4.083888389954144E-4]:1.082803159893E0)[&rate=2.610936702063594E-4]:7.337979195427E-1)[&rate=6.141183967746332E-4]:9.797257388783E-1)[&rate=4.7268441462324016E-4]:6.931107522037E-1)[&rate=7.361743943246848E-4]:3.149251944887E0,(17[&rate=7.528646949061466E-4]:6.622005867641E1,(27[&rate=5.006551510069631E-4]:2.112514048258E1,28[&rate=9.70177762278766E-4]:2.112514048258E1)[&rate=7.203048986191872E-4]:4.509491819383E1)[&rate=2.42087209847687E-4]:1.2706784543E1)[&rate=9.70177762278766E-4]:5.033046840154E1); +tree STATE_280000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55154.62893278322,EEF_ucld_branchRates=-266.168517335019,lnP=-55154.62893278322,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.67937832109154E-4]:9.324022249632E0,9[&rate=8.685333681916521E-4]:9.324022249632E0)[&rate=6.119125165592457E-4]:5.451714150658E0,15[&rate=7.226901849256293E-4]:1.477573640029E1)[&rate=5.67937832109154E-4]:1.102123127089E2,(14[&rate=8.887593480638219E-4]:5.343643217535E1,24[&rate=6.585314072905979E-4]:5.343643217535E1)[&rate=9.575209335882666E-4]:7.155161693384E1)[&rate=6.23270344237514E-4]:3.762323644792E0,(((((19[&rate=4.171566288888361E-4]:1.076331021604E1,18[&rate=0.0010125671377771536]:1.076331021604E1)[&rate=2.526976005406079E-4]:5.684259632292E1,((11[&rate=6.832531676116348E-4]:1.342794581663E1,29[&rate=3.3797931312339437E-4]:1.342794581663E1)[&rate=8.887593480638219E-4]:5.378047751263E1,(33[&rate=8.493736318275727E-4]:5.729102533641E1,13[&rate=4.725703259597234E-4]:5.729102533641E1)[&rate=6.465584308436081E-4]:9.917397992853E0)[&rate=9.102028506631125E-4]:3.974832096994E-1)[&rate=2.8086361728778313E-4]:3.515635947371E0,((10[&rate=4.938230808343252E-4]:2.548020560132E1,31[&rate=4.171566288888361E-4]:2.548020560132E1)[&rate=2.526976005406079E-4]:4.525962456202E1,23[&rate=5.465723073712588E-4]:7.073983016334E1)[&rate=3.0280044160083824E-4]:3.817123229958E-1)[&rate=5.67937832109154E-4]:2.633980839513E0,(25[&rate=6.585314072905979E-4]:7.215244460275E1,(12[&rate=8.493736318275727E-4]:7.069383862203E1,((16[&rate=8.887593480638219E-4]:3.177610193742E1,((22[&rate=6.960547971646544E-4]:2.8213870573E0,21[&rate=0.001624246118820065]:2.8213870573E0)[&rate=5.787495712971688E-4]:4.481017413823E0,20[&rate=3.6718131741729384E-4]:7.302404471123E0)[&rate=0.0014613608586144162]:2.44736974663E1)[&rate=0.0010787688057570266]:3.708473833888E1,(((30[&rate=0.0010787688057570266]:4.693507744993E1,26[&rate=6.960547971646544E-4]:4.693507744993E1)[&rate=0.001214403015143637]:1.005751037594E1,32[&rate=3.214285181677186E-4]:5.699258782587E1)[&rate=4.938230808343252E-4]:1.01451598243E1,((((2[&rate=5.254331258263524E-4]:2.321051958735E0,4[&rate=4.5093585085369085E-4]:2.321051958735E0)[&rate=8.685333681916521E-4]:9.340372945365E-1,3[&rate=7.365935141454817E-4]:3.255089253272E0)[&rate=9.330477893991243E-4]:7.70796893671E0,5[&rate=8.311541376716791E-4]:1.096305818998E1)[&rate=6.23270344237514E-4]:1.143868969622E0,((7[&rate=3.0280044160083824E-4]:7.433658599149E0,6[&rate=8.685333681916521E-4]:7.433658599149E0)[&rate=6.465584308436081E-4]:8.516534188969E-1,1[&rate=5.465723073712588E-4]:8.285312018046E0)[&rate=5.896706675755208E-4]:3.821615141558E0)[&rate=5.896706675755208E-4]:5.503082049057E1)[&rate=5.043731312931637E-4]:1.72309262613E0)[&rate=0.0010439764880436895]:1.832998345725E0)[&rate=3.6718131741729384E-4]:1.458605980721E0)[&rate=5.787495712971688E-4]:1.603078723095E0)[&rate=3.804736424735575E-4]:3.454537513343E0,(17[&rate=6.960547971646544E-4]:6.603433190355E1,(27[&rate=6.960547971646544E-4]:2.166882282827E1,28[&rate=9.330477893991243E-4]:2.166882282827E1)[&rate=7.971271993438931E-4]:4.436550907528E1)[&rate=4.6181578602507323E-4]:1.117572893564E1)[&rate=0.001214403015143637]:5.154031191479E1); +tree STATE_290000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55168.1943992586,EEF_ucld_branchRates=-266.168517335019,lnP=-55168.1943992586,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.049546374861198E-4]:9.540292420166E0,9[&rate=7.617581441720167E-4]:9.540292420166E0)[&rate=4.7057569015793627E-4]:6.502976981871E0,15[&rate=6.686814814394657E-4]:1.604326940204E1)[&rate=5.8601168941058E-4]:1.053633702946E2,(14[&rate=0.0011210504943764547]:4.713731829105E1,24[&rate=0.0011560680487425687]:4.713731829105E1)[&rate=0.0010395200102657517]:7.42693214056E1)[&rate=5.455900436793612E-4]:2.215508500204E0,(((12[&rate=0.0011560680487425687]:7.253198531598E1,((16[&rate=4.98794305882152E-4]:3.387469252705E1,((22[&rate=9.440234938375699E-4]:2.188923012432E0,21[&rate=6.416438372144103E-4]:2.188923012432E0)[&rate=7.234502449647192E-4]:6.017429434197E0,20[&rate=9.283390241818461E-4]:8.206352446629E0)[&rate=0.0013166794886332223]:2.566834008042E1)[&rate=6.77696121829087E-4]:3.622316521419E1,(((((2[&rate=8.246710875154395E-4]:1.57559358877E0,4[&rate=5.8601168941058E-4]:1.57559358877E0)[&rate=6.142680129545554E-4]:8.032480404976E-1,3[&rate=6.596781773271369E-4]:2.378841629267E0)[&rate=8.856354367044346E-4]:8.651894136452E0,5[&rate=4.131738396496856E-4]:1.103073576572E1)[&rate=9.440234938375699E-4]:1.662702481091E0,((7[&rate=6.958182637605437E-4]:7.358982762356E0,6[&rate=9.134416787359901E-4]:7.358982762356E0)[&rate=9.782507976782556E-4]:1.433141106139E0,1[&rate=7.328390722937088E-4]:8.792123868494E0)[&rate=4.355972008937653E-4]:3.901314378316E0)[&rate=7.141604248916641E-4]:5.560110880907E1,((30[&rate=7.818385176704547E-4]:4.868566802697E1,26[&rate=0.0010174419869202654]:4.868566802697E1)[&rate=9.134416787359901E-4]:9.027224166257E0,32[&rate=6.506709462819509E-4]:5.771289219323E1)[&rate=7.141604248916641E-4]:1.058165486265E1)[&rate=9.134416787359901E-4]:1.803310685363E0)[&rate=4.7057569015793627E-4]:2.434127574732E0)[&rate=6.77696121829087E-4]:3.409053515923E0,(25[&rate=7.921775173019889E-4]:7.538637242166E1,(((19[&rate=0.0014181819746135443]:1.490925621472E1,18[&rate=6.958182637605437E-4]:1.490925621472E1)[&rate=4.98794305882152E-4]:5.52089064628E1,((11[&rate=7.717057112306525E-4]:1.28180596078E1,29[&rate=4.355972008937653E-4]:1.28180596078E1)[&rate=7.717057112306525E-4]:5.611224247924E1,(33[&rate=7.423424056851332E-4]:6.156793119448E1,13[&rate=4.8527476918795156E-4]:6.156793119448E1)[&rate=5.455900436793612E-4]:7.362370892558E0)[&rate=6.049786355790377E-4]:1.187860590485E0)[&rate=0.0010174419869202654]:3.122548762763E0,((10[&rate=3.836020550570163E-4]:2.132261164815E1,31[&rate=7.423424056851332E-4]:2.132261164815E1)[&rate=3.3299066168863755E-4]:5.100755285858E1,23[&rate=5.8601168941058E-4]:7.233016450672E1)[&rate=8.992342669851183E-4]:9.105469335606E-1)[&rate=6.958182637605437E-4]:2.145660981375E0)[&rate=8.027455114222606E-4]:5.546664102421E-1)[&rate=8.360870006801218E-4]:2.967354707118E0,(17[&rate=0.0010174419869202654]:6.894815833019E1,(27[&rate=6.049786355790377E-4]:2.618011960531E1,28[&rate=8.992342669851183E-4]:2.618011960531E1)[&rate=9.440234938375699E-4]:4.276803872489E1)[&rate=7.818385176704547E-4]:9.960235208824E0)[&rate=9.283390241818461E-4]:4.471375465784E1); +tree STATE_300000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55132.59623971877,EEF_ucld_branchRates=-266.168517335019,lnP=-55132.59623971877,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.908663029074864E-4]:7.911731596326E0,9[&rate=0.0012516546287124552]:7.911731596326E0)[&rate=3.834222538046178E-4]:8.311455174376E0,15[&rate=3.834222538046178E-4]:1.62231867707E1)[&rate=0.0010398572221666416]:9.655134808129E1,(14[&rate=8.778763480603875E-4]:4.860834329075E1,24[&rate=8.430435189441829E-4]:4.860834329075E1)[&rate=6.690571448265439E-4]:6.416619156125E1)[&rate=9.16566866299512E-4]:9.893200971857E0,(((((19[&rate=4.2327661931886197E-4]:1.48690957839E1,18[&rate=6.252738503876218E-4]:1.48690957839E1)[&rate=3.834222538046178E-4]:5.558949284574E1,((33[&rate=8.600370857829747E-4]:5.844272610382E1,13[&rate=3.834222538046178E-4]:5.844272610382E1)[&rate=8.966744039383641E-4]:1.122184003649E1,(11[&rate=7.678637005980576E-4]:1.283679472264E1,29[&rate=6.04196669173907E-4]:1.283679472264E1)[&rate=7.28483409507692E-4]:5.682777141768E1)[&rate=8.112260595359019E-4]:7.9402248933E-1)[&rate=2.341392103882259E-4]:2.986737130795E0,((10[&rate=6.146820865735788E-4]:2.175170636289E1,31[&rate=6.359891655996406E-4]:2.175170636289E1)[&rate=2.818068867363656E-4]:5.10516708438E1,23[&rate=5.117770580466194E-4]:7.280337720669E1)[&rate=4.908663029074864E-4]:6.419485537447E-1)[&rate=4.908663029074864E-4]:1.738277572717E0,(25[&rate=6.04196669173907E-4]:7.437724879012E1,(12[&rate=0.0010110286062813426]:7.169769647969E1,((((((2[&rate=6.468457390587597E-4]:2.135880285989E0,4[&rate=0.0010110286062813426]:2.135880285989E0)[&rate=5.220931537724574E-4]:7.096917376896E-1,3[&rate=5.732101273053879E-4]:2.845572023678E0)[&rate=0.0012516546287124552]:8.495764400851E0,5[&rate=3.6828371356305604E-4]:1.134133642453E1)[&rate=6.920672133746293E-4]:1.4159713092E0,((7[&rate=5.732101273053879E-4]:7.510381766052E0,6[&rate=5.938007122174116E-4]:7.510381766052E0)[&rate=6.252738503876218E-4]:6.310691710318E-1,1[&rate=6.804516486627358E-4]:8.141450937084E0)[&rate=3.328515377591653E-4]:4.615856796644E0)[&rate=5.527744816716623E-4]:5.680481237646E1,((30[&rate=9.16566866299512E-4]:4.840544567402E1,26[&rate=7.678637005980576E-4]:4.840544567402E1)[&rate=9.377183904431869E-4]:8.419474162091E0,32[&rate=4.583283394926297E-4]:5.682491983611E1)[&rate=6.804516486627358E-4]:1.273720027408E1)[&rate=7.039271661531045E-4]:1.111664199506E0,(16[&rate=7.28483409507692E-4]:2.853190011783E1,((22[&rate=5.938007122174116E-4]:3.209401342811E0,21[&rate=9.16566866299512E-4]:3.209401342811E0)[&rate=3.105923709806773E-4]:4.859117733956E0,20[&rate=7.16056737599937E-4]:8.068519076767E0)[&rate=0.0014171218957608623]:2.046338104106E1)[&rate=8.600370857829747E-4]:4.214188419187E1)[&rate=0.0018798527971593962]:1.023912169989E0)[&rate=8.966744039383641E-4]:2.679552310432E0)[&rate=8.600370857829747E-4]:8.063545430355E-1)[&rate=6.252738503876218E-4]:3.115659224055E0,(17[&rate=9.16566866299512E-4]:6.919309877117E1,(27[&rate=5.117770580466194E-4]:2.635649247546E1,28[&rate=0.0010110286062813426]:2.635649247546E1)[&rate=7.16056737599937E-4]:4.28366062957E1)[&rate=3.328515377591653E-4]:9.106163786044E0)[&rate=0.0011951309095769684]:4.436847326664E1); +tree STATE_310000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55130.41940413208,EEF_ucld_branchRates=-266.168517335019,lnP=-55130.41940413208,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.215004685236421E-4]:9.596869029694E0,9[&rate=0.0011820142315545677]:9.596869029694E0)[&rate=2.1257967640872554E-4]:9.285215458404E0,15[&rate=4.321841028389267E-4]:1.88820844881E1)[&rate=7.024090834994813E-4]:1.009342547E2,(14[&rate=7.858861571154136E-4]:5.426581616028E1,24[&rate=0.00107003721364207]:5.426581616028E1)[&rate=9.24550727548799E-4]:6.555052302783E1)[&rate=2.5746278899740845E-4]:3.743112655792E0,(((((11[&rate=9.24550727548799E-4]:1.42927867756E1,29[&rate=5.862100955343091E-4]:1.42927867756E1)[&rate=5.11277384240552E-4]:5.999648893289E1,((33[&rate=5.215004685236421E-4]:5.82154150312E1,13[&rate=4.0257626840527953E-4]:5.82154150312E1)[&rate=2.8924504752140536E-4]:1.480171676267E1,(19[&rate=4.1251147473647627E-4]:1.559169646324E1,18[&rate=9.549504003786772E-4]:1.559169646324E1)[&rate=5.215004685236421E-4]:5.742543533063E1)[&rate=6.216428885757834E-4]:1.272143914612E0)[&rate=7.675382216072989E-4]:3.026570540967E0,((10[&rate=7.675382216072989E-4]:2.092584423989E1,31[&rate=6.600498216113497E-4]:2.092584423989E1)[&rate=3.029680215917263E-4]:5.539040911001E1,23[&rate=4.911554355930862E-4]:7.631625334991E1)[&rate=2.7426662809321254E-4]:9.995928995481E-1)[&rate=3.823681489908321E-4]:1.788779253211E0,(25[&rate=4.911554355930862E-4]:7.817912994073E1,(12[&rate=7.335071853736334E-4]:7.373620818133E1,((((((2[&rate=6.216428885757834E-4]:1.441198398024E0,4[&rate=5.530219628018802E-4]:1.441198398024E0)[&rate=6.340727511900543E-4]:1.465569659818E0,3[&rate=3.029680215917263E-4]:2.906768057841E0)[&rate=5.423551276906882E-4]:7.475744819758E0,5[&rate=4.0257626840527953E-4]:1.03825128776E1)[&rate=8.258719924401195E-4]:3.009763224904E0,((7[&rate=2.1257967640872554E-4]:9.225221133479E0,6[&rate=8.478401208423723E-4]:9.225221133479E0)[&rate=8.052810935201412E-4]:6.926992557314E-1,1[&rate=4.2237252624082025E-4]:9.91792038921E0)[&rate=3.3948051911189087E-4]:3.474355713293E0)[&rate=5.977394535330165E-4]:5.636795312324E1,((30[&rate=6.600498216113497E-4]:4.748328837986E1,26[&rate=4.7135608074158E-4]:4.748328837986E1)[&rate=8.258719924401195E-4]:1.174664897194E1,32[&rate=3.7202620506695253E-4]:5.92299373518E1)[&rate=2.1257967640872554E-4]:1.053029187395E1)[&rate=5.423551276906882E-4]:1.771635680995E0,(16[&rate=5.318539500964401E-4]:3.249975914016E1,((22[&rate=0.0011208041777194823]:2.861826301967E0,21[&rate=3.029680215917263E-4]:2.861826301967E0)[&rate=6.468631995012861E-4]:5.097384188511E0,20[&rate=2.5746278899740845E-4]:7.959210490478E0)[&rate=0.0015250143528459845]:2.454054864969E1)[&rate=8.052810935201412E-4]:3.903210576658E1)[&rate=7.675382216072989E-4]:2.20434327459E0)[&rate=6.216428885757834E-4]:4.442921759399E0)[&rate=5.11277384240552E-4]:9.254955619394E-1)[&rate=4.6153596993866433E-4]:4.210237756912E0,(17[&rate=8.052810935201412E-4]:7.019247016884E1,(27[&rate=5.862100955343091E-4]:2.660072595765E1,28[&rate=9.24550727548799E-4]:2.660072595765E1)[&rate=8.258719924401195E-4]:4.359174421118E1)[&rate=5.215004685236421E-4]:1.312239309074E1)[&rate=0.0018874586790647257]:4.024458858433E1); +tree STATE_320000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.699900765736,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.699900765736,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.246319856888717E-4]:7.118427479032E0,9[&rate=9.299699932480038E-4]:7.118427479032E0)[&rate=6.094707834923466E-4]:9.504645841972E0,15[&rate=6.543090854691401E-4]:1.6623073321E1)[&rate=6.393599900177117E-4]:1.057281502153E2,(14[&rate=9.93547772175196E-4]:5.019284738768E1,24[&rate=7.415748549493034E-4]:5.019284738768E1)[&rate=8.19083127441631E-4]:7.215837614859E1)[&rate=8.19083127441631E-4]:6.0383434624E0,(((((19[&rate=4.888362546431221E-4]:1.296803986341E1,18[&rate=6.618273569881965E-4]:1.296803986341E1)[&rate=3.8840572973900873E-4]:6.115630979737E1,((11[&rate=5.629330369055155E-4]:1.787225505841E1,29[&rate=6.92469402058816E-4]:1.787225505841E1)[&rate=6.543090854691401E-4]:5.465444187357E1,(33[&rate=6.319053141273234E-4]:6.370487132754E1,13[&rate=4.503930983050234E-4]:6.370487132754E1)[&rate=7.083059561640792E-4]:8.82182560445E0)[&rate=8.54705056925241E-4]:1.597652728787E0)[&rate=3.8840572973900873E-4]:1.365828616531E0,((10[&rate=7.977772664833451E-4]:2.308655932775E1,31[&rate=6.693905193533902E-4]:2.308655932775E1)[&rate=4.772123748209331E-4]:4.975927501897E1,23[&rate=5.866356564440887E-4]:7.284583434672E1)[&rate=5.287760243254088E-4]:2.644343930587E0)[&rate=8.422552253534779E-4]:2.44928904002E0,(25[&rate=6.770104562220707E-4]:7.594882108431E1,(12[&rate=6.468239089817403E-4]:7.454909489936E1,((((30[&rate=8.54705056925241E-4]:4.844184474952E1,26[&rate=7.164002618680337E-4]:4.844184474952E1)[&rate=7.50323317841633E-4]:1.402878357578E1,32[&rate=4.996532226662755E-4]:6.24706283253E1)[&rate=7.246319856888717E-4]:8.325465375286E0,(16[&rate=5.629330369055155E-4]:2.967735220753E1,((22[&rate=8.817851337273508E-4]:2.963807059063E0,21[&rate=4.888362546431221E-4]:2.963807059063E0)[&rate=8.422552253534779E-4]:5.301063838784E0,20[&rate=4.645285820432447E-4]:8.264870897847E0)[&rate=0.0013817590345164491]:2.141248130969E1)[&rate=8.422552253534779E-4]:4.111874149305E1)[&rate=0.0012207165228390658]:2.078375331494E0,((((2[&rate=5.7885857487836E-4]:1.419580890569E0,4[&rate=9.126486013770684E-4]:1.419580890569E0)[&rate=4.341441348773755E-4]:1.89009485968E0,3[&rate=5.463340111403293E-4]:3.309675750249E0)[&rate=6.169738622739973E-4]:8.799942733677E0,5[&rate=4.341441348773755E-4]:1.210961848393E1)[&rate=6.468239089817403E-4]:2.870674937931E0,((7[&rate=7.415748549493034E-4]:8.350818381711E0,6[&rate=8.54705056925241E-4]:8.350818381711E0)[&rate=6.468239089817403E-4]:1.826409952533E0,1[&rate=0.0010527099408096869]:1.017722833424E1)[&rate=7.50323317841633E-4]:4.803065087613E0)[&rate=6.92469402058816E-4]:5.789417561022E1)[&rate=8.19083127441631E-4]:1.674625867286E0)[&rate=5.7885857487836E-4]:1.399726184948E0)[&rate=9.126486013770684E-4]:1.990646233012E0)[&rate=8.422552253534779E-4]:2.546001699086E0,(17[&rate=8.966618569036918E-4]:7.476810363708E1,(27[&rate=4.1450725157693045E-4]:3.052819663716E1,28[&rate=7.779426097194149E-4]:3.052819663716E1)[&rate=6.693905193533902E-4]:4.423990699993E1)[&rate=6.244475446382894E-4]:5.717365379326E0)[&rate=0.0010206762515500797]:4.790409798226E1); +tree STATE_330000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55150.68417351364,EEF_ucld_branchRates=-266.168517335019,lnP=-55150.68417351364,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.267370274115018E-4]:7.361991745658E0,9[&rate=8.058333803676466E-4]:7.361991745658E0)[&rate=5.752204452569423E-4]:8.217519397444E0,15[&rate=3.4280389465168426E-4]:1.55795111431E1)[&rate=6.178696576812593E-4]:1.121300185519E2,(14[&rate=8.21496787546945E-4]:5.269347111054E1,24[&rate=8.753678164214186E-4]:5.269347111054E1)[&rate=0.001048162697724898]:7.501605858445E1)[&rate=6.73660376141134E-4]:8.687806329627E-1,(((((19[&rate=8.560642962408184E-4]:1.461028474314E1,18[&rate=6.449334844114626E-4]:1.461028474314E1)[&rate=4.84361723363163E-4]:5.483269631696E1,((11[&rate=5.835728409964524E-4]:1.837910983803E1,29[&rate=5.669297389573821E-4]:1.837910983803E1)[&rate=7.509367015695058E-4]:5.002908157062E1,(33[&rate=6.178696576812593E-4]:5.930958552889E1,13[&rate=5.752204452569423E-4]:5.930958552889E1)[&rate=3.733494926960959E-4]:9.098605879754E0)[&rate=3.2335625998363636E-4]:1.034789651449E0)[&rate=3.5907179922416946E-4]:3.698819082969E0,((10[&rate=8.058333803676466E-4]:1.691095371298E1,31[&rate=5.341189312251873E-4]:1.691095371298E1)[&rate=3.4280389465168426E-4]:5.406233729392E1,23[&rate=7.156111146909293E-4]:7.09732910069E1)[&rate=4.7577941169890247E-4]:2.168509136167E0)[&rate=6.005160845628879E-4]:3.296967999046E0,((12[&rate=8.381818200319026E-4]:7.132654840387E1,((((30[&rate=5.92000208547334E-4]:4.711464225749E1,26[&rate=5.752204452569423E-4]:4.711464225749E1)[&rate=2.9787894757300244E-4]:1.202725775837E1,32[&rate=4.928256325983023E-4]:5.914190001586E1)[&rate=5.586875509995687E-4]:7.917260405215E0,((((2[&rate=8.058333803676466E-4]:1.773345628171E0,4[&rate=7.77034285736795E-4]:1.773345628171E0)[&rate=6.542981370970247E-4]:4.871143471618E-1,3[&rate=8.560642962408184E-4]:2.260459975333E0)[&rate=3.4280389465168426E-4]:8.982041059324E0,5[&rate=3.981673764036233E-4]:1.124250103466E1)[&rate=7.3870957731638E-4]:1.499708421486E0,((7[&rate=6.94022934235775E-4]:8.096903202374E0,6[&rate=5.422957184637918E-4]:8.096903202374E0)[&rate=4.0931668633523724E-4]:1.366302918064E0,1[&rate=4.581462416616338E-4]:9.463206120438E0)[&rate=3.981673764036233E-4]:3.279003335706E0)[&rate=3.733494926960959E-4]:5.431695096493E1)[&rate=5.504806755395354E-4]:2.780901157487E0,(16[&rate=4.396464931482944E-4]:3.146169648256E1,((22[&rate=5.669297389573821E-4]:2.358936842504E0,21[&rate=5.92000208547334E-4]:2.358936842504E0)[&rate=4.928256325983023E-4]:5.813636226925E0,20[&rate=7.636893068395057E-4]:8.172573069429E0)[&rate=0.0011639349916119906]:2.328912341314E1)[&rate=7.91050761124405E-4]:3.8378365096E1)[&rate=7.77034285736795E-4]:1.48648682531E0)[&rate=5.669297389573821E-4]:2.537411861735E0,25[&rate=6.357525898095115E-4]:7.386396026561E1)[&rate=7.77034285736795E-4]:2.574807876501E0)[&rate=5.011949275686088E-4]:5.428678406482E0,(17[&rate=0.0010080786852925971]:7.664498673683E1,(27[&rate=6.83703683844771E-4]:3.008953025608E1,28[&rate=8.753678164214186E-4]:3.008953025608E1)[&rate=6.83703683844771E-4]:4.655545648075E1)[&rate=0.0014773287130625684]:5.222459811767E0)[&rate=0.001048162697724898]:4.671086377936E1); +tree STATE_340000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55154.462720388954,EEF_ucld_branchRates=-266.168517335019,lnP=-55154.462720388954,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.322031738980447E-4]:7.110960557087E0,9[&rate=8.874573456287434E-4]:7.110960557087E0)[&rate=8.53353897275771E-4]:9.016801528496E0,15[&rate=4.8314888229290424E-4]:1.612776208558E1)[&rate=8.375836314210029E-4]:1.018290927039E2,(14[&rate=0.001440343582183076]:4.7866123793E1,24[&rate=9.258754664168605E-4]:4.7866123793E1)[&rate=9.258754664168605E-4]:7.009073099651E1)[&rate=8.699400919780453E-4]:9.807546549205E0,(((((19[&rate=9.701794524394316E-4]:1.643632740903E1,18[&rate=8.375836314210029E-4]:1.643632740903E1)[&rate=4.153983057077814E-4]:5.289331756293E1,((11[&rate=5.793413409001229E-4]:1.629416292415E1,29[&rate=3.535523156837782E-4]:1.629416292415E1)[&rate=7.556076522424077E-4]:5.183985696677E1,(33[&rate=7.942786168239969E-4]:5.708548006083E1,13[&rate=4.279363441751257E-4]:5.708548006083E1)[&rate=3.8758689612976977E-4]:1.104853983009E1)[&rate=5.793413409001229E-4]:1.195625081031E0)[&rate=7.091420288923245E-4]:1.46294344211E0,((10[&rate=3.535523156837782E-4]:2.242149938932E1,31[&rate=6.17301940386019E-4]:2.242149938932E1)[&rate=5.129814861594812E-4]:4.799820771613E1,23[&rate=4.6217491654455177E-4]:7.041970710545E1)[&rate=0.0011778662306653387]:3.728813086114E-1)[&rate=8.874573456287434E-4]:1.318284100875E0,((((((3[&rate=8.375836314210029E-4]:1.983429435512E0,4[&rate=6.77030406521497E-4]:1.983429435512E0)[&rate=7.680704346413822E-4]:3.704290476882E-1,2[&rate=6.269587865256051E-4]:2.3538584832E0)[&rate=6.17301940386019E-4]:9.65927981066E0,5[&rate=3.535523156837782E-4]:1.201313829386E1)[&rate=6.667217819047184E-4]:1.097905972325E0,((7[&rate=8.874573456287434E-4]:8.097071552139E0,6[&rate=7.809456266780934E-4]:8.097071552139E0)[&rate=3.0392383863093374E-4]:1.225804355877E0,1[&rate=6.982193404934955E-4]:9.322875908016E0)[&rate=6.367130721206366E-4]:3.788168358169E0)[&rate=3.8758689612976977E-4]:5.487441039956E1,(12[&rate=9.258754664168605E-4]:6.779915791495E1,((16[&rate=7.435172251548309E-4]:2.828444112199E1,((22[&rate=6.667217819047184E-4]:1.957722959022E0,21[&rate=0.0011778662306653387]:1.957722959022E0)[&rate=5.887620832904734E-4]:5.883323578657E0,20[&rate=7.435172251548309E-4]:7.841046537679E0)[&rate=0.0013185260143456783]:2.044339458431E1)[&rate=0.0010888460237397364]:3.830408600696E1,((30[&rate=5.226400493307603E-4]:4.996732430355E1,26[&rate=5.887620832904734E-4]:4.996732430355E1)[&rate=6.17301940386019E-4]:1.02238289706E1,32[&rate=5.032010301412316E-4]:6.019115327415E1)[&rate=5.032010301412316E-4]:6.397373854796E0)[&rate=9.060452512422987E-4]:1.210630786005E0)[&rate=3.320031199094297E-4]:1.862967507934E-1)[&rate=6.875227941944465E-4]:2.14411152907E0,25[&rate=6.269587865256051E-4]:7.012956619482E1)[&rate=6.17301940386019E-4]:1.98130632012E0)[&rate=4.153983057077814E-4]:5.863957905502E0,(17[&rate=6.077270569911687E-4]:6.858863512718E1,(27[&rate=3.0392383863093374E-4]:2.693752499056E1,28[&rate=8.375836314210029E-4]:2.693752499056E1)[&rate=6.465806354158344E-4]:4.165111013661E1)[&rate=6.17301940386019E-4]:9.386195293263E0)[&rate=9.471625022781013E-4]:4.978957091828E1); +tree STATE_350000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55158.78120421397,EEF_ucld_branchRates=-266.168517335019,lnP=-55158.78120421397,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.976498443899919E-4]:8.146619261731E0,9[&rate=6.933200778728209E-4]:8.146619261731E0)[&rate=4.567509631855265E-4]:8.057716531448E0,15[&rate=6.279729048958966E-4]:1.620433579318E1)[&rate=7.586062902511242E-4]:1.028556549081E2,(14[&rate=8.146392009328169E-4]:4.943107481667E1,24[&rate=9.90890947098375E-4]:4.943107481667E1)[&rate=5.573999675652063E-4]:6.962891588458E1)[&rate=7.292457147390183E-4]:6.851348270676E0,(((((19[&rate=5.967448132184707E-4]:1.601735201265E1,18[&rate=7.02023653430033E-4]:1.601735201265E1)[&rate=6.598886626137809E-4]:5.496260386491E1,((11[&rate=4.567509631855265E-4]:1.675122116137E1,29[&rate=8.273405373826303E-4]:1.675122116137E1)[&rate=6.045312629747295E-4]:5.36599861898E1,(33[&rate=7.199662305757283E-4]:5.972337527401E1,13[&rate=3.553190907233114E-4]:5.972337527401E1)[&rate=6.045312629747295E-4]:1.068783207716E1)[&rate=3.553190907233114E-4]:5.687485263905E-1)[&rate=6.358561464174929E-4]:4.74281214345E0,((10[&rate=5.493359842770327E-4]:2.416274021448E1,31[&rate=9.031280577243998E-4]:2.416274021448E1)[&rate=3.553190907233114E-4]:5.063272181251E1,23[&rate=6.201326341717853E-4]:7.479546202699E1)[&rate=5.15720880140721E-4]:9.27305994023E-1)[&rate=8.025176678172322E-4]:1.361720576652E0,((12[&rate=8.858675189388924E-4]:7.467006269997E1,((16[&rate=6.358561464174929E-4]:2.988419112727E1,((22[&rate=6.358561464174929E-4]:4.089133646355E0,21[&rate=8.548264185653991E-4]:4.089133646355E0)[&rate=6.358561464174929E-4]:3.632335905328E0,20[&rate=4.0124735555086076E-4]:7.721469551683E0)[&rate=0.0014204952540651091]:2.216272157559E1)[&rate=8.698308329569246E-4]:4.19723642235E1,(((((3[&rate=5.32854142920114E-4]:2.36292929089E0,4[&rate=6.680700213940627E-4]:2.36292929089E0)[&rate=7.909075324775936E-4]:5.945872884968E-1,2[&rate=7.586062902511242E-4]:2.957516579387E0)[&rate=4.0124735555086076E-4]:9.16757565541E0,5[&rate=6.358561464174929E-4]:1.21250922348E1)[&rate=8.548264185653991E-4]:1.513068271858E0,((7[&rate=4.567509631855265E-4]:8.83869652975E0,6[&rate=8.025176678172322E-4]:8.83869652975E0)[&rate=8.407033564991292E-4]:3.870016473871E-1,1[&rate=4.567509631855265E-4]:9.225698177137E0)[&rate=7.586062902511242E-4]:4.412462329519E0)[&rate=6.847707584367843E-4]:5.739248273797E1,((30[&rate=6.680700213940627E-4]:5.300231392856E1,26[&rate=6.358561464174929E-4]:5.300231392856E1)[&rate=6.279729048958966E-4]:1.098948553622E1,32[&rate=4.1767376072364735E-4]:6.399179946477E1)[&rate=0.0010554932447426986]:7.038843779856E0)[&rate=8.698308329569246E-4]:8.259121061443E-1)[&rate=5.811339012284636E-4]:2.813507349201E0)[&rate=5.32854142920114E-4]:1.73057248148E0,25[&rate=6.847707584367843E-4]:7.640063518145E1)[&rate=7.586062902511242E-4]:6.838534162116E-1)[&rate=5.493359842770327E-4]:6.259025726873E0,(17[&rate=8.407033564991292E-4]:7.292605898592E1,(27[&rate=7.909075324775936E-4]:3.225598665252E1,28[&rate=0.0010554932447426986]:3.225598665252E1)[&rate=8.273405373826303E-4]:4.06700723334E1)[&rate=4.3200806952934046E-4]:1.041745533861E1)[&rate=0.0011556611426329828]:4.256782464739E1); +tree STATE_360000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.800806365754,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.800806365754,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.4311804523790766E-4]:8.783838769548E0,9[&rate=6.137582486896784E-4]:8.783838769548E0)[&rate=3.2690498947440805E-4]:7.706307393504E0,15[&rate=6.419637517113855E-4]:1.649014616305E1)[&rate=7.048951427059834E-4]:1.069343331575E2,(14[&rate=8.499242652600086E-4]:5.140811671039E1,24[&rate=0.001049961290603911]:5.140811671039E1)[&rate=7.979266345419365E-4]:7.201636261018E1)[&rate=5.611853701195436E-4]:5.3286000825E0,(((((19[&rate=7.681783776877441E-4]:2.055513959858E1,18[&rate=4.603082758983865E-4]:2.055513959858E1)[&rate=4.603082758983865E-4]:5.489541797352E1,((11[&rate=6.936242686691796E-4]:1.790966895505E1,29[&rate=5.782872877772822E-4]:1.790966895505E1)[&rate=6.323741680819325E-4]:5.632657398739E1,(33[&rate=6.61810131887488E-4]:6.302593938133E1,13[&rate=5.276929046561798E-4]:6.302593938133E1)[&rate=7.048951427059834E-4]:1.121030356111E1)[&rate=8.141260489197513E-4]:1.214314629661E0)[&rate=3.8221167690877375E-4]:1.378298275432E0,((10[&rate=3.8221167690877375E-4]:2.382308580539E1,31[&rate=5.696954173510896E-4]:2.382308580539E1)[&rate=3.2690498947440805E-4]:5.040712588671E1,23[&rate=4.944111822799199E-4]:7.42302116921E1)[&rate=0.001049961290603911]:2.598644155439E0)[&rate=7.54409916762161E-4]:3.062831620774E0,((12[&rate=7.54409916762161E-4]:7.729074371521E1,((16[&rate=3.0756747990607903E-4]:3.360369834923E1,((22[&rate=0.0012761067208175848]:2.836941741998E0,21[&rate=5.696954173510896E-4]:2.836941741998E0)[&rate=5.696954173510896E-4]:5.161175712172E0,20[&rate=5.696954173510896E-4]:7.998117454171E0)[&rate=0.001049961290603911]:2.560558089506E1)[&rate=8.141260489197513E-4]:4.222308153672E1,(((((3[&rate=4.6898048171036455E-4]:2.406792353696E0,4[&rate=8.313970075590452E-4]:2.406792353696E0)[&rate=3.933922031889503E-4]:4.100971623359E-1,2[&rate=5.360108447665154E-4]:2.816889516032E0)[&rate=7.048951427059834E-4]:1.00457357115E1,5[&rate=6.137582486896784E-4]:1.286262522753E1)[&rate=7.54409916762161E-4]:1.403202006496E0,((7[&rate=3.8221167690877375E-4]:9.087952415232E0,6[&rate=5.696954173510896E-4]:9.087952415232E0)[&rate=4.7753967386017564E-4]:1.291202117212E0,1[&rate=8.499242652600086E-4]:1.037915453244E1)[&rate=7.54409916762161E-4]:3.88667270158E0)[&rate=5.527435549406016E-4]:5.858192118829E1,((30[&rate=6.61810131887488E-4]:4.819690353779E1,26[&rate=6.229787049135914E-4]:4.819690353779E1)[&rate=6.229787049135914E-4]:1.093898746808E1,32[&rate=3.933922031889503E-4]:5.913589100587E1)[&rate=4.4251214671918167E-4]:1.371185741645E1)[&rate=5.957724763243096E-4]:2.979031463635E0)[&rate=5.276929046561798E-4]:1.46396382926E0)[&rate=5.696954173510896E-4]:1.898695265558E0,25[&rate=5.193887842169909E-4]:7.918943898077E1)[&rate=7.286660951845471E-4]:7.022484875386E-1)[&rate=3.2690498947440805E-4]:4.398169438983E0,(17[&rate=8.141260489197513E-4]:7.452266354839E1,(27[&rate=4.3331965635190137E-4]:2.827850846454E1,28[&rate=7.826508548089032E-4]:2.827850846454E1)[&rate=8.499242652600086E-4]:4.624415508385E1)[&rate=2.8231233307561484E-4]:9.767193358899E0)[&rate=0.001171322357349016]:4.446322249578E1); +tree STATE_370000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55157.87866324824,EEF_ucld_branchRates=-266.168517335019,lnP=-55157.87866324824,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.4181627362247423E-4]:8.315142604445E0,9[&rate=0.0016673567228464923]:8.315142604445E0)[&rate=8.883716998705745E-4]:5.978668990044E0,15[&rate=0.0010723716744515542]:1.429381159449E1)[&rate=9.83143448209304E-4]:9.235922393964E1,(14[&rate=0.0014343668419339937]:4.357250958395E1,24[&rate=9.330615609201157E-4]:4.357250958395E1)[&rate=9.83143448209304E-4]:6.308052595018E1)[&rate=6.851579392556547E-4]:1.663771052083E1,(((((19[&rate=6.993619776470734E-4]:1.910034506632E1,18[&rate=4.2436747576320453E-4]:1.910034506632E1)[&rate=6.183979559555097E-4]:5.149309172831E1,((11[&rate=8.28954515728843E-4]:1.333652318424E1,29[&rate=6.851579392556547E-4]:1.333652318424E1)[&rate=6.993619776470734E-4]:5.339539405176E1,(33[&rate=6.31268113200611E-4]:5.91282304948E1,13[&rate=6.183979559555097E-4]:5.91282304948E1)[&rate=7.442189349659581E-4]:7.603686741205E0)[&rate=8.28954515728843E-4]:3.861519558626E0)[&rate=4.4905442524957666E-4]:8.754321978146E-1,((10[&rate=7.139171658343554E-4]:1.758196194018E1,31[&rate=6.576819979508072E-4]:1.758196194018E1)[&rate=2.6478132125188996E-4]:5.243139715121E1,23[&rate=6.183979559555097E-4]:7.001335909139E1)[&rate=6.183979559555097E-4]:1.455509901048E0)[&rate=5.565414148617573E-4]:2.989029694543E0,((12[&rate=0.0010723716744515542]:7.227118734875E1,((16[&rate=4.3680497588340414E-4]:3.115053906003E1,((22[&rate=0.00234851260340188]:3.576423722999E0,21[&rate=5.808682170887665E-4]:3.576423722999E0)[&rate=4.7315732912430397E-4]:5.351843114582E0,20[&rate=2.8795696960163826E-4]:8.92826683758E0)[&rate=0.0014343668419339937]:2.222227222245E1)[&rate=0.0010723716744515542]:3.805304310434E1,(((30[&rate=8.676645774083961E-4]:4.682690290496E1,26[&rate=6.057221206591573E-4]:4.682690290496E1)[&rate=9.83143448209304E-4]:8.585106042757E0,32[&rate=3.0779079881562997E-4]:5.541200894772E1)[&rate=3.7150997241419854E-4]:1.311572766937E1,((((3[&rate=6.057221206591573E-4]:2.00624551627E0,4[&rate=8.883716998705745E-4]:2.00624551627E0)[&rate=4.4905442524957666E-4]:3.743790061553E-1,2[&rate=2.353328247345734E-4]:2.380624522426E0)[&rate=5.44525320557687E-4]:8.317000481315E0,5[&rate=6.993619776470734E-4]:1.069762500374E1)[&rate=3.570585516928393E-4]:2.829234181494E0,((7[&rate=3.570585516928393E-4]:9.662792456532E0,6[&rate=9.330615609201157E-4]:9.662792456532E0)[&rate=4.969596804331286E-4]:1.197803511546E0,1[&rate=5.088197992272259E-4]:1.086059596808E1)[&rate=6.183979559555097E-4]:2.666263217157E0)[&rate=6.183979559555097E-4]:5.500087743185E1)[&rate=0.0010403363624404214]:6.758455472828E-1)[&rate=3.7150997241419854E-4]:3.067605184375E0)[&rate=2.8795696960163826E-4]:8.783763634266E-1,25[&rate=7.60043161401013E-4]:7.314956371217E1)[&rate=9.101261437479882E-4]:1.30833497481E0)[&rate=2.8795696960163826E-4]:2.376296477271E0,(17[&rate=0.0010403363624404214]:6.488913026364E1,(27[&rate=8.478912748901586E-4]:3.037036771261E1,28[&rate=9.330615609201157E-4]:3.037036771261E1)[&rate=8.107702239105428E-4]:3.451876255102E1)[&rate=5.44525320557687E-4]:1.194506490062E1)[&rate=0.0013562238249810736]:4.64565508907E1); +tree STATE_380000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.440705718844,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.440705718844,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.300355718922186E-4]:1.068842596899E1,9[&rate=5.927030123235871E-4]:1.068842596899E1)[&rate=4.946388713819909E-4]:7.532698206178E0,15[&rate=5.148507041000547E-4]:1.822112417517E1)[&rate=8.19223652045042E-4]:8.926885905889E1,(14[&rate=9.414113720627684E-4]:4.262300538861E1,24[&rate=9.208093019982979E-4]:4.262300538861E1)[&rate=0.001267020400048829]:6.486697784546E1)[&rate=0.0014788327092806757]:1.746258856737E1,(((((19[&rate=7.777515643369384E-4]:1.659527370825E1,18[&rate=6.320296356098543E-4]:1.659527370825E1)[&rate=3.015353636043785E-4]:5.345076960482E1,((33[&rate=6.420810609137986E-4]:5.868287654233E1,13[&rate=4.149792910606177E-4]:5.868287654233E1)[&rate=7.283635922829131E-4]:9.485657051462E0,(11[&rate=8.497606276817883E-4]:1.311724177462E1,29[&rate=6.220820095918839E-4]:1.311724177462E1)[&rate=8.497606276817883E-4]:5.505129181917E1)[&rate=5.048205710773698E-4]:1.877509719287E0)[&rate=5.733454989359751E-4]:3.257391158293E0,((10[&rate=6.220820095918839E-4]:1.786229447211E1,31[&rate=8.833244607115158E-4]:1.786229447211E1)[&rate=3.703670487289901E-4]:5.337649413829E1,23[&rate=5.83012087453606E-4]:7.12387886104E1)[&rate=4.39939676940408E-4]:2.064645860968E0)[&rate=6.944923092239646E-4]:2.565364863428E0,((12[&rate=8.497606276817883E-4]:7.202695159244E1,(((((3[&rate=0.0011534246814018545]:1.59927875846E0,4[&rate=6.320296356098543E-4]:1.59927875846E0)[&rate=4.0134088112779104E-4]:4.316662508647E-1,2[&rate=4.39939676940408E-4]:2.030945009325E0)[&rate=7.523504173782504E-4]:6.449771583781E0,5[&rate=6.320296356098543E-4]:8.480716593106E0)[&rate=8.19223652045042E-4]:3.021681218422E0,((7[&rate=7.05537103925075E-4]:7.420800311688E0,6[&rate=6.420810609137986E-4]:7.420800311688E0)[&rate=4.946388713819909E-4]:2.085547856727E0,1[&rate=6.220820095918839E-4]:9.506348168415E0)[&rate=5.443206596755824E-4]:1.996049643113E0)[&rate=5.345752877939442E-4]:5.880730348117E1,(((30[&rate=8.661158567947459E-4]:4.854464611914E1,26[&rate=4.842700412944149E-4]:4.854464611914E1)[&rate=6.836619954332643E-4]:1.010356632962E1,32[&rate=3.300355718922186E-4]:5.864821244876E1)[&rate=7.910785826432817E-4]:1.07182933723E1,(16[&rate=3.5194410341444544E-4]:3.315388639499E1,((22[&rate=9.874746298088218E-4]:2.86830789949E0,21[&rate=3.5194410341444544E-4]:2.86830789949E0)[&rate=6.944923092239646E-4]:5.231641151307E0,20[&rate=6.625613966424356E-4]:8.099949050798E0)[&rate=0.0012039957664519228]:2.505393734419E1)[&rate=9.63537778433646E-4]:3.621261942607E1)[&rate=9.63537778433646E-4]:9.431954716401E-1)[&rate=9.414113720627684E-4]:1.717250299744E0)[&rate=8.048845641275841E-4]:1.513579213489E0,25[&rate=6.024344352673019E-4]:7.354053080593E1)[&rate=6.836619954332643E-4]:2.328268528864E0)[&rate=6.320296356098543E-4]:2.132441059827E0,(17[&rate=0.001351128171264593]:7.120639282811E1,(27[&rate=4.149792910606177E-4]:3.17989535452E1,28[&rate=9.015069063559901E-4]:3.17989535452E1)[&rate=6.944923092239646E-4]:3.940743928291E1)[&rate=7.910785826432817E-4]:6.794847566518E0)[&rate=9.208093019982979E-4]:4.695133140681E1); +tree STATE_390000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55138.76717268659,EEF_ucld_branchRates=-266.168517335019,lnP=-55138.76717268659,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.194412310255505E-4]:8.971443223508E0,9[&rate=0.0012603622333371971]:8.971443223508E0)[&rate=7.62249216375599E-4]:1.033227464898E1,15[&rate=6.271073012109406E-4]:1.930371787249E1)[&rate=7.034051262285858E-4]:8.109029165265E1,(14[&rate=0.001023879422698331]:4.368567787646E1,24[&rate=0.0010009610619116393]:4.368567787646E1)[&rate=8.72231553672988E-4]:5.670833164868E1)[&rate=0.0013874958438491903]:2.342525720187E1,(((((19[&rate=0.0010009610619116393]:1.598482334271E1,18[&rate=6.592704433933293E-4]:1.598482334271E1)[&rate=3.9422745022133654E-4]:5.474767864421E1,((33[&rate=7.500433187382959E-4]:5.990701679245E1,13[&rate=4.7014722806882465E-4]:5.990701679245E1)[&rate=0.001104267729800632]:8.214709377202E0,(11[&rate=5.738566332374985E-4]:1.696223243839E1,29[&rate=6.592704433933293E-4]:1.696223243839E1)[&rate=5.738566332374985E-4]:5.115949373126E1)[&rate=6.811006178270707E-4]:2.610775817274E0)[&rate=6.921845701991627E-4]:2.494449633053E0,((10[&rate=0.0010751631190189267]:1.766330079674E1,31[&rate=0.001023879422698331]:1.766330079674E1)[&rate=3.9422745022133654E-4]:5.499177129578E1,23[&rate=5.070601095228625E-4]:7.265507209252E1)[&rate=0.0010009610619116393]:5.718795274591E-1)[&rate=6.271073012109406E-4]:2.265879219927E0,((12[&rate=7.147810734268206E-4]:6.974082395343E1,((16[&rate=4.42875295377153E-4]:3.169449078084E1,((22[&rate=9.592923486967802E-4]:3.085782616977E0,21[&rate=5.52203092850371E-4]:3.085782616977E0)[&rate=8.278781178422093E-4]:4.68246639389E0,20[&rate=9.220168757115878E-4]:7.768249010868E0)[&rate=0.001625239204547441]:2.392624176997E1)[&rate=8.569279808759052E-4]:3.741622917581E1,(((((3[&rate=6.811006178270707E-4]:1.545818970496E0,4[&rate=8.72231553672988E-4]:1.545818970496E0)[&rate=7.380788010391989E-4]:3.651000463885E-1,2[&rate=6.811006178270707E-4]:1.910919016885E0)[&rate=9.401765744044804E-4]:5.355920372509E0,5[&rate=4.2798970685944477E-4]:7.266839389393E0)[&rate=0.0012603622333371971]:3.847849325739E0,((7[&rate=3.9422745022133654E-4]:7.611990550623E0,1[&rate=7.263320637780899E-4]:7.611990550623E0)[&rate=6.921845701991627E-4]:1.179319527824E0,6[&rate=6.377739073706669E-4]:8.791310078446E0)[&rate=9.401765744044804E-4]:2.323378636686E0)[&rate=5.186699382892189E-4]:5.703981522381E1,((30[&rate=6.701351339879758E-4]:4.881277133852E1,26[&rate=8.421611739704576E-4]:4.881277133852E1)[&rate=7.747219715552721E-4]:8.283789932075E0,32[&rate=3.503637110685406E-4]:5.70965612706E1)[&rate=8.140320671818991E-4]:1.105794266834E1)[&rate=6.377739073706669E-4]:9.562160177127E-1)[&rate=0.0013874958438491903]:6.301039967813E-1)[&rate=5.300345259072631E-4]:3.602933592168E0,25[&rate=5.411993673429406E-4]:7.33437575456E1)[&rate=4.42875295377153E-4]:2.149073294311E0)[&rate=8.881324780254545E-4]:4.096502041586E0,(17[&rate=9.220168757115878E-4]:6.675074930378E1,(27[&rate=3.503637110685406E-4]:3.840417179183E1,28[&rate=7.747219715552721E-4]:3.840417179183E1)[&rate=7.263320637780899E-4]:2.834657751196E1)[&rate=4.2798970685944477E-4]:1.283858357771E1)[&rate=0.001048506396279708]:4.422993384551E1); +tree STATE_400000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55138.48500995097,EEF_ucld_branchRates=-266.168517335019,lnP=-55138.48500995097,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.3416937636545186E-4]:8.646902932921E0,9[&rate=9.921311955641207E-4]:8.646902932921E0)[&rate=2.772321517273265E-4]:9.428279467658E0,15[&rate=3.6961202964240947E-4]:1.807518240058E1)[&rate=8.646812841493725E-4]:9.037013388238E1,(14[&rate=9.343502445768772E-4]:4.240412653074E1,24[&rate=7.595814334579874E-4]:4.240412653074E1)[&rate=7.170707988048164E-4]:6.604118975221E1)[&rate=6.550616048714174E-4]:1.187179528345E1,(((((19[&rate=5.797863698855382E-4]:1.858271625437E1,18[&rate=6.324805892494504E-4]:1.858271625437E1)[&rate=5.113911003979121E-4]:4.762262022446E1,((33[&rate=7.448562005557799E-4]:5.715488214269E1,13[&rate=3.6961202964240947E-4]:5.715488214269E1)[&rate=3.150316056036689E-4]:7.016346723816E0,(11[&rate=3.150316056036689E-4]:1.320680434597E1,29[&rate=8.079298503909151E-4]:1.320680434597E1)[&rate=5.697328379720988E-4]:5.096442452053E1)[&rate=5.797863698855382E-4]:2.034107612316E0)[&rate=3.443690253973973E-4]:5.055766653283E0,((10[&rate=6.10843161705745E-4]:1.744333709227E1,31[&rate=6.10843161705745E-4]:1.744333709227E1)[&rate=3.3038028202607276E-4]:5.281297191601E1,23[&rate=3.6961202964240947E-4]:7.025630900828E1)[&rate=5.402331484372975E-4]:1.004794123825E0)[&rate=4.240910860291703E-4]:2.204756932638E0,((12[&rate=7.595814334579874E-4]:7.034466336577E1,((16[&rate=6.436413708734888E-4]:3.622681810883E1,((22[&rate=8.646812841493725E-4]:2.650637566964E0,21[&rate=0.0012317616243391848]:2.650637566964E0)[&rate=6.436413708734888E-4]:5.17679750346E0,20[&rate=6.215552458284412E-4]:7.827435070424E0)[&rate=8.079298503909151E-4]:2.83993830384E1)[&rate=4.92314656963836E-4]:3.201970986744E1,(((((3[&rate=0.0011640216992238645]:1.540897403184E0,4[&rate=7.039019288807356E-4]:1.540897403184E0)[&rate=3.443690253973973E-4]:1.454052787195E-1,2[&rate=4.4408814012509613E-4]:1.686302681904E0)[&rate=5.30567104509208E-4]:7.217813030105E0,5[&rate=5.797863698855382E-4]:8.904115712009E0)[&rate=4.5388052525423614E-4]:1.994921384792E0,((7[&rate=8.079298503909151E-4]:6.375164652244E0,6[&rate=4.7319774957116796E-4]:6.375164652244E0)[&rate=9.092742325110747E-4]:1.386829049505E0,1[&rate=5.598002113648312E-4]:7.761993701749E0)[&rate=8.646812841493725E-4]:3.137043395052E0)[&rate=6.003236965770491E-4]:5.476110571367E1,((30[&rate=7.448562005557799E-4]:4.760909949603E1,26[&rate=5.899775238406093E-4]:4.760909949603E1)[&rate=7.039019288807356E-4]:6.601395580386E0,32[&rate=5.209584031785439E-4]:5.421049507642E1)[&rate=5.113911003979121E-4]:1.144964773405E1)[&rate=2.5081910834167916E-4]:2.586385165794E0)[&rate=0.001322731229329703]:2.098135389505E0)[&rate=5.697328379720988E-4]:1.069095266801E0,25[&rate=8.646812841493725E-4]:7.141375863257E1)[&rate=4.138143624249966E-4]:2.052101432171E0)[&rate=2.772321517273265E-4]:4.330829107569E0,(17[&rate=8.646812841493725E-4]:6.783995555452E1,(27[&rate=6.911540910611448E-4]:2.917599883033E1,28[&rate=0.001109944039684141]:2.917599883033E1)[&rate=7.910336076493549E-4]:3.866395672418E1)[&rate=5.697328379720988E-4]:9.956733617798E0)[&rate=0.0014620242743406207]:4.252042239409E1); +tree STATE_410000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55143.632012221125,EEF_ucld_branchRates=-266.168517335019,lnP=-55143.632012221125,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.3450431550453E-4]:8.258314649319E0,9[&rate=6.214680616012443E-4]:8.258314649319E0)[&rate=2.634384438069108E-4]:1.050461524619E1,15[&rate=4.2469565133018943E-4]:1.876292989551E1)[&rate=7.361337805654675E-4]:8.878696046397E1,(14[&rate=9.993653188785717E-4]:4.295003008626E1,24[&rate=0.0014359840784256026]:4.295003008626E1)[&rate=8.061902862499419E-4]:6.459986027323E1)[&rate=5.366774599170445E-4]:2.181358422458E1,(((((19[&rate=5.7185514209193E-4]:1.60169395834E1,18[&rate=8.678399548671735E-4]:1.60169395834E1)[&rate=5.138922040248609E-4]:6.010719565451E1,((33[&rate=7.202421753095087E-4]:6.854520675893E1,13[&rate=3.1346649358834856E-4]:6.854520675893E1)[&rate=4.019602196574765E-4]:6.712044594449E0,(11[&rate=2.146851221743464E-4]:1.579646720104E1,29[&rate=4.019602196574765E-4]:1.579646720104E1)[&rate=5.252308513999167E-4]:5.946078415234E1)[&rate=5.7185514209193E-4]:8.668838845273E-1)[&rate=7.875626559126008E-4]:2.33398072144E0,((10[&rate=6.755598086228017E-4]:2.041008230005E1,31[&rate=9.411215151447017E-4]:2.041008230005E1)[&rate=2.634384438069108E-4]:5.718154413152E1,23[&rate=2.9832163130023197E-4]:7.759162643157E1)[&rate=6.478451004529988E-4]:8.664895277749E-1)[&rate=5.7185514209193E-4]:2.500443413937E0,((12[&rate=7.526090178413787E-4]:7.430620253462E1,((16[&rate=2.634384438069108E-4]:3.919839193151E1,((22[&rate=0.001154581498657938]:2.127921498759E0,21[&rate=3.903563284696011E-4]:2.127921498759E0)[&rate=5.02642676322105E-4]:5.981985210097E0,20[&rate=3.539858316110424E-4]:8.109906708856E0)[&rate=0.0017620848949408267]:3.108848522266E1)[&rate=8.061902862499419E-4]:3.418412993235E1,(((((3[&rate=4.8033436846188173E-4]:1.642747501055E0,4[&rate=7.361337805654675E-4]:1.642747501055E0)[&rate=0.0015635153602111614]:2.41454083606E-1,2[&rate=4.1339320618299376E-4]:1.884201584661E0)[&rate=8.907400152723213E-4]:8.633850911122E0,5[&rate=3.4109665009277013E-4]:1.051805249578E1)[&rate=0.0012680723462899863]:1.265207157186E0,((7[&rate=5.7185514209193E-4]:7.542827009574E0,6[&rate=8.678399548671735E-4]:7.542827009574E0)[&rate=6.755598086228017E-4]:7.912505602886E-1,1[&rate=5.02642676322105E-4]:8.334077569863E0)[&rate=0.0012680723462899863]:3.449182083106E0)[&rate=5.7185514209193E-4]:5.905380117969E1,((30[&rate=9.411215151447017E-4]:4.802820828648E1,26[&rate=6.755598086228017E-4]:4.802820828648E1)[&rate=5.599702737247372E-4]:1.027870724747E1,32[&rate=4.6923588314565684E-4]:5.830691553394E1)[&rate=5.7185514209193E-4]:1.253014529871E1)[&rate=8.678399548671735E-4]:2.545461031211E0)[&rate=6.478451004529988E-4]:9.236806707533E-1)[&rate=2.9832163130023197E-4]:5.104273666372E0,25[&rate=8.462116174592041E-4]:7.941047620099E1)[&rate=7.875626559126008E-4]:1.548083172293E0)[&rate=2.8184728886076175E-4]:3.157154829286E0,(17[&rate=0.0011090505018124764]:7.074561146872E1,(27[&rate=3.4109665009277013E-4]:3.531444414733E1,28[&rate=9.690976765639932E-4]:3.531444414733E1)[&rate=6.3450431550453E-4]:3.543116732139E1)[&rate=5.839257110803551E-4]:1.337010273385E1)[&rate=9.411215151447017E-4]:4.52477603815E1); +tree STATE_420000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55118.60609297945,EEF_ucld_branchRates=-266.168517335019,lnP=-55118.60609297945,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.702836706349486E-4]:7.766017936759E0,9[&rate=9.42574319416602E-4]:7.766017936759E0)[&rate=4.574565330226411E-4]:1.047589529876E1,15[&rate=7.178505113085951E-4]:1.824191323551E1)[&rate=9.42574319416602E-4]:9.292655945305E1,(14[&rate=0.0019026097740883763]:4.089268589982E1,24[&rate=0.001261729055599599]:4.089268589982E1)[&rate=6.260015983005512E-4]:7.027578678874E1)[&rate=8.81847953809939E-4]:1.223950600196E1,(((((19[&rate=6.702836706349486E-4]:1.826400099299E1,18[&rate=8.637528559250193E-4]:1.826400099299E1)[&rate=3.6679008165744565E-4]:5.521472340691E1,((33[&rate=7.99082906516808E-4]:6.335526877759E1,13[&rate=4.685984793068316E-4]:6.335526877759E1)[&rate=3.311706315833914E-4]:9.170291722633E0,(11[&rate=4.685984793068316E-4]:1.329210263168E1,29[&rate=6.260015983005512E-4]:1.329210263168E1)[&rate=4.221397053517758E-4]:5.923345786855E1)[&rate=7.433478276723215E-4]:9.531638996779E-1)[&rate=6.368362316820533E-4]:1.01305125651E0,((10[&rate=4.902645364397674E-4]:1.936372673918E1,31[&rate=0.00104630975743972]:1.936372673918E1)[&rate=5.008674010117245E-4]:5.320334988779E1,23[&rate=4.221397053517758E-4]:7.256707662698E1)[&rate=0.0012042007535110933]:1.924699029433E0)[&rate=5.630530981201164E-4]:3.788159201942E0,((12[&rate=8.637528559250193E-4]:7.50285339088E1,((16[&rate=5.424414201517941E-4]:3.625418272311E1,((22[&rate=9.009195238141727E-4]:2.107659457395E0,21[&rate=5.630530981201164E-4]:2.107659457395E0)[&rate=8.142609990746862E-4]:4.153749044658E0,20[&rate=7.178505113085951E-4]:6.261408502053E0)[&rate=0.0013337199938306444]:2.999277422106E1)[&rate=9.009195238141727E-4]:3.668736342227E1,(((((3[&rate=0.0011561956581744002]:1.501000482922E0,4[&rate=7.566306252985693E-4]:1.501000482922E0)[&rate=6.818127522489302E-4]:4.06600030519E-1,2[&rate=3.0881273159755163E-4]:1.907600513441E0)[&rate=5.733848208208148E-4]:8.806900054824E0,5[&rate=4.094709346254871E-4]:1.071450056827E1)[&rate=6.368362316820533E-4]:2.470801608329E0,((7[&rate=6.260015983005512E-4]:7.31001919774E0,6[&rate=7.844533565075344E-4]:7.31001919774E0)[&rate=8.142609990746862E-4]:1.288789520537E0,1[&rate=3.5006635596767803E-4]:8.598808718277E0)[&rate=7.844533565075344E-4]:4.586493458318E0)[&rate=5.321236695768836E-4]:5.706059174716E1,((30[&rate=7.178505113085951E-4]:5.154568364367E1,26[&rate=6.260015983005512E-4]:5.154568364367E1)[&rate=0.001017019856319146]:7.508509642408E0,32[&rate=3.311706315833914E-4]:5.905419328607E1)[&rate=6.589581576616462E-4]:1.119170063768E1)[&rate=5.837576195623846E-4]:2.695652221621E0)[&rate=9.42574319416602E-4]:2.086987763419E0)[&rate=3.5006635596767803E-4]:1.82460914524E0,25[&rate=6.152936938181198E-4]:7.685314305404E1)[&rate=3.0881273159755163E-4]:1.426791804314E0)[&rate=6.260015983005512E-4]:4.724681228912E0,(17[&rate=8.142609990746862E-4]:7.465163244805E1,(27[&rate=3.6679008165744565E-4]:3.042117407202E1,28[&rate=9.655319376331449E-4]:3.042117407202E1)[&rate=7.055715095798063E-4]:4.423045837604E1)[&rate=5.941887179456376E-4]:8.352983639214E0)[&rate=0.0015778930686898426]:4.040336260325E1); +tree STATE_430000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55132.56554577505,EEF_ucld_branchRates=-266.168517335019,lnP=-55132.56554577505,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.675783967164867E-4]:7.716215533621E0,9[&rate=9.123886577236854E-4]:7.716215533621E0)[&rate=3.603254489906682E-4]:9.122886305261E0,15[&rate=3.603254489906682E-4]:1.683910183888E1)[&rate=8.730484076912783E-4]:8.856848731942E1,(14[&rate=0.0016352334253641086]:4.156514949134E1,24[&rate=7.53276959920748E-4]:4.156514949134E1)[&rate=0.001086649562059078]:6.384243966696E1)[&rate=7.409429560971089E-4]:1.989764484523E1,(((((19[&rate=5.509446730885284E-4]:1.670924967727E1,18[&rate=7.409429560971089E-4]:1.670924967727E1)[&rate=3.603254489906682E-4]:5.3968185479E1,((33[&rate=8.730484076912783E-4]:6.046324435436E1,13[&rate=5.238234144533878E-4]:6.046324435436E1)[&rate=5.690109176497302E-4]:8.803799843022E0,(11[&rate=8.730484076912783E-4]:1.408594621153E1,29[&rate=6.438024263972344E-4]:1.408594621153E1)[&rate=6.740024136166709E-4]:5.518109798585E1)[&rate=0.0011904999151805319]:1.410390958891E0)[&rate=3.221368489418206E-4]:2.295949093386E0,((10[&rate=6.8447291357514E-4]:1.663125430118E1,31[&rate=6.056633722328744E-4]:1.663125430118E1)[&rate=6.244858780016771E-4]:5.609161897479E1,23[&rate=6.056633722328744E-4]:7.272287327597E1)[&rate=7.660480398669046E-4]:2.50510973689E-1)[&rate=5.599685609592306E-4]:4.513948954652E0,((12[&rate=8.0751790966958E-4]:7.439841488203E1,((16[&rate=3.603254489906682E-4]:3.576534769494E1,((22[&rate=6.056633722328744E-4]:3.291073720586E0,21[&rate=6.056633722328744E-4]:3.291073720586E0)[&rate=6.438024263972344E-4]:4.624919668553E0,20[&rate=3.221368489418206E-4]:7.915993389139E0)[&rate=0.001086649562059078]:2.78493543058E1)[&rate=9.584132622938017E-4]:3.646012006444E1,(((((3[&rate=8.384934892995796E-4]:1.623197359337E0,4[&rate=7.53276959920748E-4]:1.623197359337E0)[&rate=5.872111470900174E-4]:2.387210683409E-1,2[&rate=8.0751790966958E-4]:1.861918427678E0)[&rate=6.637475978835942E-4]:8.41559286506E0,5[&rate=4.474174150110901E-4]:1.027751129274E1)[&rate=7.660480398669046E-4]:3.049491096798E0,((7[&rate=5.599685609592306E-4]:7.422618433247E0,6[&rate=7.061544003776859E-4]:7.422618433247E0)[&rate=9.584132622938017E-4]:1.928329743687E0,1[&rate=4.675783967164867E-4]:9.350948176934E0)[&rate=6.438024263972344E-4]:3.976054212601E0)[&rate=5.872111470900174E-4]:5.738742434059E1,((30[&rate=6.438024263972344E-4]:4.804423965713E1,26[&rate=5.238234144533878E-4]:4.804423965713E1)[&rate=5.328890010541567E-4]:1.236050070677E1,32[&rate=3.221368489418206E-4]:6.04047403639E1)[&rate=4.8684763797649465E-4]:1.030968636623E1)[&rate=6.740024136166709E-4]:1.511041029261E0)[&rate=4.144922706806995E-4]:2.172947122645E0)[&rate=6.15020794087697E-4]:7.930271437858E-1,25[&rate=5.509446730885284E-4]:7.519144202582E1)[&rate=8.920231076893872E-4]:2.295891178492E0)[&rate=4.259316839451561E-4]:2.621551105984E0,(17[&rate=8.384934892995796E-4]:6.842777126378E1,(27[&rate=4.259316839451561E-4]:3.21637829833E1,28[&rate=0.0010478615957481893]:3.21637829833E1)[&rate=7.061544003776859E-4]:3.626398828048E1)[&rate=3.603254489906682E-4]:1.168111304651E1)[&rate=0.0013834543455660082]:4.519634969324E1); +tree STATE_440000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55131.23852483192,EEF_ucld_branchRates=-266.168517335019,lnP=-55131.23852483192,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=9.497009202809718E-4]:8.35420950403E0,9[&rate=5.747783990648948E-4]:8.35420950403E0)[&rate=3.041531834227713E-4]:7.755708825324E0,15[&rate=2.862227800173435E-4]:1.610991832935E1)[&rate=6.67741229463046E-4]:9.094508348982E1,(14[&rate=0.0015817922294039746]:3.887506792718E1,24[&rate=5.85680558794532E-4]:3.887506792718E1)[&rate=0.001238258664785017]:6.8179933892E1)[&rate=0.0014204971280375202]:2.216356295796E1,(((((19[&rate=8.177080633122408E-4]:1.492507132783E1,18[&rate=3.965672842390939E-4]:1.492507132783E1)[&rate=3.041531834227713E-4]:5.639902898707E1,((33[&rate=9.778635251042926E-4]:6.130227673163E1,13[&rate=3.7335596442346434E-4]:6.130227673163E1)[&rate=6.67741229463046E-4]:9.01925451862E0,(11[&rate=4.913218149791825E-4]:1.356845351003E1,29[&rate=7.358721212702812E-4]:1.356845351003E1)[&rate=9.237868149919757E-4]:5.675307774022E1)[&rate=6.079948411424932E-4]:1.002569064651E0)[&rate=5.533916251533308E-4]:1.876492511232E0,((10[&rate=5.747783990648948E-4]:1.80571806848E1,31[&rate=6.937554827691586E-4]:1.80571806848E1)[&rate=3.041531834227713E-4]:5.472174661937E1,23[&rate=5.220937727208842E-4]:7.277892730417E1)[&rate=2.862227800173435E-4]:4.216655219596E-1)[&rate=6.079948411424932E-4]:2.193218450166E0,((12[&rate=8.997622356969371E-4]:7.17306254337E1,((16[&rate=4.076918058182771E-4]:3.568531079649E1,((22[&rate=0.0010087432656306153]:2.805540459184E0,21[&rate=7.509127806775719E-4]:2.805540459184E0)[&rate=8.563141891399528E-4]:5.102016980066E0,20[&rate=4.1857759733989164E-4]:7.90755743925E0)[&rate=0.001176572167133901]:2.777775335724E1)[&rate=0.0011253105961461693]:3.455552075783E1,(((((3[&rate=4.1857759733989164E-4]:1.697476968949E0,4[&rate=7.358721212702812E-4]:1.697476968949E0)[&rate=5.118013088266772E-4]:1.909868440813E-1,2[&rate=2.862227800173435E-4]:1.88846381303E0)[&rate=2.6513275342943555E-4]:1.002337437877E1,5[&rate=5.220937727208842E-4]:1.19118381918E1)[&rate=6.194465632101085E-4]:1.835309395521E0,((7[&rate=7.665450694696932E-4]:8.460256841047E0,6[&rate=8.77346106360987E-4]:8.460256841047E0)[&rate=4.913218149791825E-4]:1.937620722814E0,1[&rate=7.509127806775719E-4]:1.039787756386E1)[&rate=4.7085787469359553E-4]:3.349270023462E0)[&rate=2.6513275342943555E-4]:5.39983913233E1,((30[&rate=8.77346106360987E-4]:4.819966111759E1,26[&rate=6.079948411424932E-4]:4.819966111759E1)[&rate=5.747783990648948E-4]:1.103267069303E1,32[&rate=3.611043221159824E-4]:5.923233181062E1)[&rate=5.220937727208842E-4]:8.513207100001E0)[&rate=5.640213576418618E-4]:2.495292643695E0)[&rate=0.0013158292808572833]:1.489793879377E0)[&rate=8.997622356969371E-4]:2.20069384293E0,25[&rate=6.552443783689777E-4]:7.393131927663E1)[&rate=6.43047321854709E-4]:1.462491999669E0)[&rate=5.85680558794532E-4]:4.086962763127E0,(17[&rate=6.937554827691586E-4]:7.049578675303E1,(27[&rate=5.85680558794532E-4]:3.341567452438E1,28[&rate=8.177080633122408E-4]:3.341567452438E1)[&rate=7.358721212702812E-4]:3.708011222865E1)[&rate=4.398155718679091E-4]:8.984987286396E0)[&rate=5.324448979609076E-4]:4.973779073771E1); +tree STATE_450000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55141.74410102451,EEF_ucld_branchRates=-266.168517335019,lnP=-55141.74410102451,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.356665178991711E-4]:9.358818855806E0,9[&rate=9.371930643066711E-4]:9.358818855806E0)[&rate=6.490312780582868E-4]:7.689108097548E0,15[&rate=3.4138084021587047E-4]:1.704792695335E1)[&rate=8.24013566862896E-4]:9.301918447524E1,(14[&rate=0.0016438102712117032]:4.000449740889E1,24[&rate=7.92551283196223E-4]:4.000449740889E1)[&rate=9.844272090225616E-4]:7.00626140197E1)[&rate=0.0016438102712117032]:1.927112369065E1,(((((19[&rate=6.606888871500762E-4]:1.290107039683E1,18[&rate=9.157637277535048E-4]:1.290107039683E1)[&rate=3.221687940775971E-4]:5.682811364326E1,((33[&rate=7.492503389155882E-4]:5.823550130871E1,13[&rate=4.852170045554186E-4]:5.823550130871E1)[&rate=6.26234744749037E-4]:8.801060692914E0,(11[&rate=4.39624538165241E-4]:1.462243545847E1,29[&rate=6.72546703150656E-4]:1.462243545847E1)[&rate=5.713935331101842E-4]:5.241412654315E1)[&rate=5.606503229281215E-4]:2.692622038465E0)[&rate=4.150606443594714E-4]:2.87641505255E0,((10[&rate=5.070317018108015E-4]:1.970582770422E1,31[&rate=6.375531368841945E-4]:1.970582770422E1)[&rate=4.6285539498507473E-4]:5.125343330263E1,23[&rate=4.6285539498507473E-4]:7.095926100685E1)[&rate=3.4138084021587047E-4]:1.64633808579E0)[&rate=0.0011881779261406137]:2.121986564692E0,((12[&rate=6.040021151566944E-4]:7.025928627055E1,((((((2[&rate=5.606503229281215E-4]:1.611430553682E0,4[&rate=0.001301608293482671]:1.611430553682E0)[&rate=3.4138084021587047E-4]:4.694628307608E-1,3[&rate=5.606503229281215E-4]:2.080893384442E0)[&rate=9.371930643066711E-4]:9.075857708091E0,5[&rate=8.24013566862896E-4]:1.115675109253E1)[&rate=9.371930643066711E-4]:2.108984246792E0,((7[&rate=4.275464525610453E-4]:9.021026965348E0,6[&rate=5.606503229281215E-4]:9.021026965348E0)[&rate=7.095488338628193E-4]:9.421214562891E-1,1[&rate=6.375531368841945E-4]:9.963148421637E0)[&rate=6.040021151566944E-4]:3.302586917689E0)[&rate=7.224436160492642E-4]:5.01003377985E1,((30[&rate=7.92551283196223E-4]:4.661437994832E1,26[&rate=7.224436160492642E-4]:4.661437994832E1)[&rate=8.24013566862896E-4]:7.589186490092E0,32[&rate=3.5842261137811643E-4]:5.420356643841E1)[&rate=2.9949889209623855E-4]:9.162506699409E0)[&rate=5.499400480126014E-4]:3.12984579376E0,(16[&rate=6.26234744749037E-4]:3.549006788617E1,((22[&rate=8.763636105477012E-4]:2.539191548752E0,21[&rate=3.4138084021587047E-4]:2.539191548752E0)[&rate=0.0010392885502835878]:4.090128719387E0,20[&rate=7.492503389155882E-4]:6.629320268139E0)[&rate=0.001301608293482671]:2.886074761803E1)[&rate=9.844272090225616E-4]:3.100585104541E1)[&rate=6.375531368841945E-4]:3.763367338968E0)[&rate=4.020665516747072E-4]:2.130085416126E0,25[&rate=8.079864968315195E-4]:7.238937168667E1)[&rate=6.26234744749037E-4]:2.33821397066E0)[&rate=8.581191865692422E-4]:3.289408417908E0,(17[&rate=9.844272090225616E-4]:6.752842137203E1,(27[&rate=3.221687940775971E-4]:2.817956702578E1,28[&rate=0.0010392885502835878]:2.817956702578E1)[&rate=6.606888871500762E-4]:3.934885434625E1)[&rate=5.499400480126014E-4]:1.048857270321E1)[&rate=0.0013792277248119674]:5.132124104401E1); +tree STATE_460000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55172.21295651247,EEF_ucld_branchRates=-266.168517335019,lnP=-55172.21295651247,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=9.271224101017265E-4]:9.352570959879E0,9[&rate=9.271224101017265E-4]:9.352570959879E0)[&rate=6.450020163745986E-4]:9.936459006433E0,15[&rate=3.6822404989636086E-4]:1.928902996631E1)[&rate=6.658086898361787E-4]:9.076166660221E1,(14[&rate=0.0014297590236987106]:4.048846613894E1,24[&rate=6.874561115022176E-4]:4.048846613894E1)[&rate=7.729124466177874E-4]:6.956223042959E1)[&rate=7.729124466177874E-4]:1.609055424942E1,(((((19[&rate=8.667922149149875E-4]:1.561581828607E1,18[&rate=4.624054131165222E-4]:1.561581828607E1)[&rate=3.3485956248172023E-4]:5.408621706996E1,((33[&rate=7.868369283394077E-4]:6.085882857746E1,13[&rate=4.308519119605803E-4]:6.085882857746E1)[&rate=3.824183409733474E-4]:7.607424437697E0,(11[&rate=8.855605853172021E-4]:1.43586412707E1,29[&rate=6.052891236735073E-4]:1.43586412707E1)[&rate=5.861114937020625E-4]:5.410761174446E1)[&rate=3.3485956248172023E-4]:1.235782340868E0)[&rate=5.578428606794646E-4]:2.810064979796E0,((10[&rate=5.956569465918394E-4]:2.198880005278E1,31[&rate=3.525888235228774E-4]:2.198880005278E1)[&rate=4.8225162449849616E-4]:5.006311339886E1,23[&rate=5.391488465731279E-4]:7.205191345164E1)[&rate=8.164999493292892E-4]:4.601868841804E-1)[&rate=6.248760483246475E-4]:2.062447011043E0,((((((((3[&rate=7.1013074086253E-4]:1.859245708198E0,4[&rate=8.667922149149875E-4]:1.859245708198E0)[&rate=9.055975137880129E-4]:1.918242642446E-1,2[&rate=5.484912789538494E-4]:2.051069972443E0)[&rate=5.484912789538494E-4]:1.113403898696E1,5[&rate=6.248760483246475E-4]:1.31851089594E1)[&rate=4.724177273944153E-4]:1.409939679194E0,((7[&rate=4.308519119605803E-4]:9.521102571869E0,1[&rate=3.525888235228774E-4]:9.521102571869E0)[&rate=6.150235263436769E-4]:1.201436746074E0,6[&rate=4.308519119605803E-4]:1.072253931794E1)[&rate=7.340561960308048E-4]:3.872509320649E0)[&rate=5.391488465731279E-4]:5.58287245357E1,((30[&rate=7.729124466177874E-4]:4.70886275887E1,26[&rate=6.248760483246475E-4]:4.70886275887E1)[&rate=7.595082710387821E-4]:1.315441781373E1,32[&rate=5.484912789538494E-4]:6.024304540243E1)[&rate=3.9556115504693054E-4]:1.018072777186E1)[&rate=6.348631444517705E-4]:1.681073125214E0,(16[&rate=3.525888235228774E-4]:3.25966467444E1,((22[&rate=6.348631444517705E-4]:2.563407500915E0,21[&rate=5.766374904372438E-4]:2.563407500915E0)[&rate=7.340561960308048E-4]:4.300230118893E0,20[&rate=9.055975137880129E-4]:6.863637619808E0)[&rate=0.0014297590236987106]:2.573300912459E1)[&rate=7.729124466177874E-4]:3.950819955511E1)[&rate=0.0011613754633567979]:3.459351370303E-1,12[&rate=0.0010707854839050444]:7.245078143653E1)[&rate=9.055975137880129E-4]:1.441133703484E0,25[&rate=6.874561115022176E-4]:7.389191514002E1)[&rate=6.052891236735073E-4]:6.826322068503E-1)[&rate=5.110024582027937E-4]:1.76392894495E0,(17[&rate=8.667922149149875E-4]:6.849451531241E1,(27[&rate=3.525888235228774E-4]:2.635767101866E1,28[&rate=0.0011613754633567979]:2.635767101866E1)[&rate=5.484912789538494E-4]:4.213684429375E1)[&rate=6.986520699446728E-4]:7.843960979407E0)[&rate=0.0013049768415146414]:4.980277452613E1); +tree STATE_470000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55129.85051269936,EEF_ucld_branchRates=-266.168517335019,lnP=-55129.85051269936,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.831069000887972E-4]:8.857526633439E0,9[&rate=5.831069000887972E-4]:8.857526633439E0)[&rate=5.61296373222668E-4]:1.05753497525E1,15[&rate=6.171274468613201E-4]:1.943287638594E1)[&rate=9.508680678779239E-4]:9.388769327502E1,(14[&rate=0.0012436190370526637]:4.440389195239E1,24[&rate=9.246240068461771E-4]:4.440389195239E1)[&rate=5.721273735855916E-4]:6.891667770857E1)[&rate=5.942535853744004E-4]:1.581667137429E1,(((((19[&rate=9.246240068461771E-4]:1.364684247716E1,18[&rate=6.787633037474138E-4]:1.364684247716E1)[&rate=3.446446421856704E-4]:6.016364031494E1,((33[&rate=7.6557351688551E-4]:6.550582934212E1,13[&rate=5.087523609164967E-4]:6.550582934212E1)[&rate=7.6557351688551E-4]:7.415448328991E0,(11[&rate=5.087523609164967E-4]:1.622073446054E1,29[&rate=4.984446106278553E-4]:1.622073446054E1)[&rate=6.171274468613201E-4]:5.670054321058E1)[&rate=5.400085045641492E-4]:8.892051209891E-1)[&rate=5.087523609164967E-4]:9.035408599892E-1,((10[&rate=4.984446106278553E-4]:2.335805628592E1,31[&rate=5.721273735855916E-4]:2.335805628592E1)[&rate=3.815854573572185E-4]:5.11537008575E1,23[&rate=3.3104494244700744E-4]:7.451175714341E1)[&rate=6.787633037474138E-4]:2.022665086789E-1)[&rate=3.164574877295202E-4]:2.026732466817E0,((((((((2[&rate=7.6557351688551E-4]:1.514836644617E0,4[&rate=5.191039263983667E-4]:1.514836644617E0)[&rate=5.942535853744004E-4]:5.43555021304E-1,3[&rate=7.199412053510433E-4]:2.05839166592E0)[&rate=7.820346454653307E-4]:9.533527719616E0,5[&rate=2.825975163863213E-4]:1.159191938554E1)[&rate=2.825975163863213E-4]:2.012159463151E0,((7[&rate=3.164574877295202E-4]:8.518559930173E0,6[&rate=3.815854573572185E-4]:8.518559930173E0)[&rate=4.3642396944949363E-4]:9.300808137241E-1,1[&rate=4.572744107575711E-4]:9.448640743897E0)[&rate=5.191039263983667E-4]:4.155438104791E0)[&rate=6.658234834619924E-4]:5.602948563919E1,((30[&rate=7.497810157942033E-4]:5.05536576803E1,26[&rate=9.246240068461771E-4]:5.05536576803E1)[&rate=2.825975163863213E-4]:9.603622378609E0,32[&rate=4.041905722829379E-4]:6.01572800589E1)[&rate=7.199412053510433E-4]:9.47628442897E0)[&rate=3.0051349757351237E-4]:1.356305077776E0,(16[&rate=2.825975163863213E-4]:3.131686178029E1,((22[&rate=9.003011877323465E-4]:2.239547467547E0,21[&rate=6.409190260255669E-4]:2.239547467547E0)[&rate=7.6557351688551E-4]:4.57960153249E0,20[&rate=6.055869146226487E-4]:6.819149000038E0)[&rate=0.0015931785892018295]:2.449771278025E1)[&rate=0.0011809621227642604]:3.967300778536E1)[&rate=6.920711494633574E-4]:2.103705051208E0,12[&rate=8.776136057232608E-4]:7.309357461686E1)[&rate=8.776136057232608E-4]:2.245998047346E0,25[&rate=8.776136057232608E-4]:7.533957266421E1)[&rate=5.400085045641492E-4]:1.401183454705E0)[&rate=0.0015931785892018295]:2.927977075225E0,(17[&rate=9.246240068461771E-4]:6.698220401637E1,(27[&rate=3.815854573572185E-4]:2.792392381292E1,28[&rate=0.0013224613975828582]:2.792392381292E1)[&rate=8.172867269230016E-4]:3.905828020345E1)[&rate=4.3642396944949363E-4]:1.268652917777E1)[&rate=0.0011289231719150156]:4.946850784111E1); +tree STATE_480000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.914370011546,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.914370011546,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.169568193307634E-4]:8.372529988105E0,9[&rate=0.0014739122751421686]:8.372529988105E0)[&rate=3.9746581492093244E-4]:5.817046041588E0,15[&rate=8.465102470977224E-4]:1.418957602969E1)[&rate=7.318147631226881E-4]:1.040547473783E2,(14[&rate=0.0013648741130866953]:4.557739326636E1,24[&rate=9.568106013214324E-4]:4.557739326636E1)[&rate=9.318250748032188E-4]:7.266693014165E1)[&rate=9.568106013214324E-4]:1.016782874463E1,((((((11[&rate=4.432032765313757E-4]:1.440111193681E1,29[&rate=6.776996088540745E-4]:1.440111193681E1)[&rate=9.085148342792043E-4]:5.550681984982E1,(33[&rate=8.102622485029824E-4]:5.944103964888E1,13[&rate=3.592584978167305E-4]:5.944103964888E1)[&rate=3.592584978167305E-4]:1.046689213775E1)[&rate=5.829868288814346E-4]:4.483787989122E-1,(19[&rate=5.610369780197227E-4]:1.263558667933E1,18[&rate=3.1357417570760976E-4]:1.263558667933E1)[&rate=3.9746581492093244E-4]:5.772072390622E1)[&rate=6.054691968941107E-4]:2.495116630966E0,((10[&rate=6.286351582698724E-4]:2.219689682806E1,31[&rate=6.906789851538717E-4]:2.219689682806E1)[&rate=2.950138386164316E-4]:5.016247913746E1,23[&rate=5.610369780197227E-4]:7.235937596552E1)[&rate=2.950138386164316E-4]:4.920512509916E-1)[&rate=7.93331958008951E-4]:1.711461734751E0,((((((((2[&rate=5.181618606672871E-4]:1.308994715584E0,4[&rate=6.286351582698724E-4]:1.308994715584E0)[&rate=5.181618606672871E-4]:6.883416728773E-1,3[&rate=4.541346030949311E-4]:1.997336388461E0)[&rate=6.286351582698724E-4]:1.098344546353E1,5[&rate=2.950138386164316E-4]:1.298078185199E1)[&rate=7.040014754861956E-4]:1.217006424821E0,((7[&rate=5.075514067786489E-4]:7.398584057796E0,6[&rate=5.502167647066148E-4]:7.398584057796E0)[&rate=9.568106013214324E-4]:7.865829715772E-1,1[&rate=5.181618606672871E-4]:8.185167029373E0)[&rate=3.4518505815063076E-4]:6.01262124744E0)[&rate=4.7566671840112984E-4]:5.539370364202E1,((30[&rate=7.77086817642972E-4]:4.526176575487E1,26[&rate=8.866462687181158E-4]:4.526176575487E1)[&rate=4.0930207351182207E-4]:1.522130371032E1,32[&rate=6.526498106734282E-4]:6.048306946519E1)[&rate=3.300846881294519E-4]:9.108422453643E0)[&rate=5.94152255762339E-4]:1.728260874181E0,(16[&rate=7.177009129614771E-4]:2.899900048487E1,((22[&rate=7.318147631226881E-4]:2.973538397876E0,21[&rate=9.837642596703655E-4]:2.973538397876E0)[&rate=5.181618606672871E-4]:3.549796863057E0,20[&rate=2.950138386164316E-4]:6.523335260933E0)[&rate=0.0020171530986357903]:2.247566522393E1)[&rate=7.040014754861956E-4]:4.232075230814E1)[&rate=0.0012840877295500182]:1.725635517845E0,12[&rate=7.93331958008951E-4]:7.304538831086E1)[&rate=9.568106013214324E-4]:5.611388186391E-1,25[&rate=7.77086817642972E-4]:7.36065271295E1)[&rate=5.287971788245851E-4]:9.563618217666E-1)[&rate=5.829868288814346E-4]:3.422281440172E0,(17[&rate=7.77086817642972E-4]:6.75731370728E1,(27[&rate=3.8524874575651983E-4]:2.592041204357E1,28[&rate=0.0011664953097540887]:2.592041204357E1)[&rate=6.054691968941107E-4]:4.165272502923E1)[&rate=9.568106013214324E-4]:1.041203331864E1)[&rate=0.0011664953097540887]:5.042698176121E1); +tree STATE_490000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55155.93474866327,EEF_ucld_branchRates=-266.168517335019,lnP=-55155.93474866327,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.738783585425204E-4]:8.953348987544E0,9[&rate=5.738783585425204E-4]:8.953348987544E0)[&rate=5.833232100258033E-4]:4.628197293152E0,15[&rate=8.163274316075615E-4]:1.35815462807E1)[&rate=9.268269896525155E-4]:9.696867499497E1,(14[&rate=0.001252507899030874]:4.569195658087E1,24[&rate=8.911874862056788E-4]:4.569195658087E1)[&rate=0.001252507899030874]:6.48582646948E1)[&rate=7.209139023860103E-4]:1.775505992232E1,((((((11[&rate=7.102613227698447E-4]:1.533210058101E1,29[&rate=6.89528764385002E-4]:1.533210058101E1)[&rate=9.673522923378275E-4]:5.204855066688E1,(33[&rate=9.463797408122218E-4]:6.012112462893E1,13[&rate=4.086891665091361E-4]:6.012112462893E1)[&rate=7.429001169445255E-4]:7.259526618958E0)[&rate=6.595778644643788E-4]:3.674315123154E0,(19[&rate=6.210835245676399E-4]:1.106281130699E1,18[&rate=7.209139023860103E-4]:1.106281130699E1)[&rate=3.7402769822582273E-4]:5.999215506405E1)[&rate=8.031099027646373E-4]:1.783117070498E0,((10[&rate=7.209139023860103E-4]:2.452415812599E1,31[&rate=4.7319978406610256E-4]:2.452415812599E1)[&rate=3.924735386749528E-4]:4.804229119514E1,23[&rate=4.6168626994628115E-4]:7.256644932114E1)[&rate=7.659620564160644E-4]:2.716341204052E-1)[&rate=4.369316938426715E-4]:1.835642376994E0,(((12[&rate=9.084852835796438E-4]:7.012829537962E1,(16[&rate=5.452406450120793E-4]:2.99632243119E1,((22[&rate=5.738783585425204E-4]:3.029034381201E0,21[&rate=3.924735386749528E-4]:3.029034381201E0)[&rate=6.794098675521023E-4]:5.797389894347E0,20[&rate=6.305997748539341E-4]:8.826424275549E0)[&rate=0.0017046291919733097]:2.113680003635E1)[&rate=6.498316164158772E-4]:4.016507106772E1)[&rate=0.0011065312516184188]:2.218226092095E0,(((30[&rate=8.44311256568681E-4]:5.129076152831E1,26[&rate=8.747976134175786E-4]:5.129076152831E1)[&rate=5.256723795334569E-4]:8.787729334758E0,32[&rate=4.6168626994628115E-4]:6.007849086306E1)[&rate=7.659620564160644E-4]:8.603260117153E0,((((2[&rate=6.595778644643788E-4]:1.381978753235E0,4[&rate=6.89528764385002E-4]:1.381978753235E0)[&rate=3.924735386749528E-4]:7.325429107491E-1,3[&rate=8.300417915664263E-4]:2.114521663984E0)[&rate=6.794098675521023E-4]:1.08641509198E1,5[&rate=6.116133854934825E-4]:1.297867258379E1)[&rate=0.0014491807514400747]:1.075823810525E0,((7[&rate=3.924735386749528E-4]:7.572215851104E0,6[&rate=9.673522923378275E-4]:7.572215851104E0)[&rate=6.498316164158772E-4]:1.125458066347E0,1[&rate=4.369316938426715E-4]:8.697673917451E0)[&rate=4.7319978406610256E-4]:5.356822476859E0)[&rate=5.927493270212426E-4]:5.462725458591E1)[&rate=5.548577528008723E-4]:3.664770491496E0)[&rate=5.156634399605105E-4]:1.138120731786E0,25[&rate=8.163274316075615E-4]:7.34846422035E1)[&rate=9.268269896525155E-4]:1.189083615037E0)[&rate=8.911874862056788E-4]:3.697850497496E0,(17[&rate=7.429001169445255E-4]:6.920182089604E1,(27[&rate=4.369316938426715E-4]:2.950625555608E1,28[&rate=0.001072187376393127]:2.950625555608E1)[&rate=6.305997748539341E-4]:3.969556533996E1)[&rate=8.031099027646373E-4]:9.169755419995E0)[&rate=9.673522923378275E-4]:4.993370488195E1); +tree STATE_500000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55107.35917739688,EEF_ucld_branchRates=-266.168517335019,lnP=-55107.35917739688,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.6328681318850806E-4]:7.037908305019E0,9[&rate=0.001022621298963064]:7.037908305019E0)[&rate=5.736908916324828E-4]:7.82515801133E0,15[&rate=8.130680899881627E-4]:1.486306631635E1)[&rate=6.472775283774323E-4]:1.024756685154E2,(14[&rate=0.0012262482926472839]:4.802142733855E1,24[&rate=0.0011304672654216122]:4.802142733855E1)[&rate=9.153814911174858E-4]:6.931730749323E1)[&rate=8.130680899881627E-4]:9.912200890514E0,((((((11[&rate=4.6004008759219467E-4]:1.575135656893E1,29[&rate=8.130680899881627E-4]:1.575135656893E1)[&rate=6.344787703327652E-4]:5.576495284682E1,(33[&rate=6.095886268283535E-4]:6.17276036326E1,13[&rate=3.892329103079943E-4]:6.17276036326E1)[&rate=9.651775643465473E-4]:9.788705783159E0)[&rate=4.713551410956128E-4]:1.882446084747E0,(19[&rate=5.163660902789979E-4]:1.222921924193E1,18[&rate=6.873921761771372E-4]:1.222921924193E1)[&rate=3.349108436940948E-4]:6.116953625857E1)[&rate=7.307194630935513E-4]:2.295941491516E0,((10[&rate=8.509449924223776E-4]:2.475678626739E1,31[&rate=3.4948370132999325E-4]:2.475678626739E1)[&rate=2.832883363629269E-4]:5.04327894102E1,23[&rate=3.764942181289855E-4]:7.51895756776E1)[&rate=7.953346627526376E-4]:5.051213144232E-1)[&rate=5.051038840731333E-4]:1.480576485982E0,(((12[&rate=9.39464670943951E-4]:6.968505903155E1,(16[&rate=3.0232301829886043E-4]:2.887283934615E1,((22[&rate=4.37146667640306E-4]:3.595429929462E0,21[&rate=5.276699363803478E-4]:3.595429929462E0)[&rate=3.349108436940948E-4]:7.310834312707E0,20[&rate=3.0232301829886043E-4]:1.090626424217E1)[&rate=0.0021983391513666554]:1.796657510399E1)[&rate=7.307194630935513E-4]:4.08122196854E1)[&rate=5.974520288446137E-4]:3.610315712085E0,(((30[&rate=6.873921761771372E-4]:5.406900942868E1,26[&rate=5.163660902789979E-4]:5.406900942868E1)[&rate=8.927131816238545E-4]:1.008497505164E1,32[&rate=3.892329103079943E-4]:6.415398448032E1)[&rate=0.0010551108074185625]:7.230351510321E0,((((3[&rate=4.938627351790708E-4]:2.146383702824E0,4[&rate=0.0021983391513666554]:2.146383702824E0)[&rate=4.938627351790708E-4]:2.008745968894E-1,2[&rate=3.892329103079943E-4]:2.347258299713E0)[&rate=7.307194630935513E-4]:1.045301467183E1,5[&rate=5.620267024642896E-4]:1.280027297154E1)[&rate=9.39464670943951E-4]:1.889183022287E0,((7[&rate=9.39464670943951E-4]:7.26328192382E0,6[&rate=8.315748911892168E-4]:7.26328192382E0)[&rate=0.001022621298963064]:1.172211448925E0,1[&rate=2.832883363629269E-4]:8.435493372744E0)[&rate=5.736908916324828E-4]:6.253962621087E0)[&rate=5.051038840731333E-4]:5.669487999681E1)[&rate=6.344787703327652E-4]:1.911038752991E0)[&rate=6.737065492932566E-4]:2.811333384125E0,25[&rate=6.219235522669571E-4]:7.610670812776E1)[&rate=9.92785462503284E-4]:1.068565350239E0)[&rate=6.344787703327652E-4]:2.414906453872E0,(17[&rate=7.158625947508273E-4]:7.145768926061E1,(27[&rate=3.193181122533896E-4]:2.766814910734E1,28[&rate=0.0013584273290860184]:2.766814910734E1)[&rate=6.873921761771372E-4]:4.378954015328E1)[&rate=5.974520288446137E-4]:8.132490671258E0)[&rate=0.0013584273290860184]:4.766075579042E1); +tree STATE_510000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55122.91785715205,EEF_ucld_branchRates=-266.168517335019,lnP=-55122.91785715205,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.819063373764553E-4]:7.219155725971E0,9[&rate=6.447294992380995E-4]:7.219155725971E0)[&rate=5.316694532771518E-4]:7.936067120479E0,15[&rate=6.339258689845561E-4]:1.515522284645E1)[&rate=7.951458797679311E-4]:1.010510236881E2,(14[&rate=0.0010506666716233544]:4.623896006336E1,24[&rate=8.104218973180484E-4]:4.623896006336E1)[&rate=8.984735304570814E-4]:6.996728647119E1)[&rate=7.951458797679311E-4]:8.559980055519E0,((((((11[&rate=6.447294992380995E-4]:1.685143388376E1,29[&rate=4.1470210622306764E-4]:1.685143388376E1)[&rate=5.516845186364787E-4]:5.513237884549E1,(33[&rate=7.393622334858929E-4]:6.585302930364E1,13[&rate=5.921010725116191E-4]:6.585302930364E1)[&rate=3.7562971810817497E-4]:6.13078342561E0)[&rate=0.0018436481570566117]:4.653142831044E-1,(19[&rate=9.192218399457012E-4]:1.16249994531E1,18[&rate=5.819063373764553E-4]:1.16249994531E1)[&rate=4.0236812167898097E-4]:6.082412755926E1)[&rate=8.984735304570814E-4]:4.245011990519E0,((10[&rate=8.104218973180484E-4]:2.373128722887E1,31[&rate=7.139908958085867E-4]:2.373128722887E1)[&rate=5.11590176579403E-4]:5.043797072976E1,23[&rate=7.264996925068737E-4]:7.416925795863E1)[&rate=6.232789353989847E-4]:2.524881044244E0)[&rate=5.216477696010311E-4]:1.664862740564E0,((((((30[&rate=4.2653517253419984E-4]:5.334733094411E1,26[&rate=7.01803194106337E-4]:5.334733094411E1)[&rate=8.430230119347522E-4]:1.062201687731E1,32[&rate=3.4448511045198594E-4]:6.396934782142E1)[&rate=5.316694532771518E-4]:7.87688523126E0,((((3[&rate=6.232789353989847E-4]:2.073415316704E0,4[&rate=9.911369621877996E-4]:2.073415316704E0)[&rate=6.127706540875029E-4]:5.15570359696E-1,2[&rate=5.216477696010311E-4]:2.5889856764E0)[&rate=6.127706540875029E-4]:7.614776935695E0,5[&rate=4.2653517253419984E-4]:1.02037626121E1)[&rate=5.014747749311925E-4]:2.134545318628E0,((7[&rate=3.2605528358823184E-4]:6.671107277535E0,1[&rate=9.414044565772993E-4]:6.671107277535E0)[&rate=3.607889214718687E-4]:1.110419015574E0,6[&rate=3.607889214718687E-4]:7.781526293109E0)[&rate=8.789605793576082E-4]:4.556781637615E0)[&rate=5.416754124152334E-4]:5.950792512196E1)[&rate=5.617146611712093E-4]:1.271964854416E0,12[&rate=7.804577528945022E-4]:7.31181979071E1)[&rate=3.7562971810817497E-4]:1.359662132476E0,(16[&rate=5.014747749311925E-4]:3.169019094015E1,((22[&rate=6.89907018803526E-4]:3.167315204395E0,21[&rate=6.89907018803526E-4]:3.167315204395E0)[&rate=3.607889214718687E-4]:6.7096209608E0,20[&rate=3.607889214718687E-4]:9.876936165195E0)[&rate=0.0018436481570566117]:2.181325477495E1)[&rate=9.414044565772993E-4]:4.278766909942E1)[&rate=0.0010506666716233544]:2.839997608138E0,25[&rate=6.55708751765478E-4]:7.731785764771E1)[&rate=7.951458797679311E-4]:1.041144095731E0)[&rate=4.2653517253419984E-4]:3.419617367249E0,(17[&rate=9.414044565772993E-4]:7.368476250588E1,(27[&rate=6.89907018803526E-4]:2.625153680078E1,28[&rate=0.0012272076857461711]:2.625153680078E1)[&rate=9.192218399457012E-4]:4.74332257051E1)[&rate=6.89907018803526E-4]:8.093856604807E0)[&rate=0.0012272076857461711]:4.298760747938E1); +tree STATE_520000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55147.072449068786,EEF_ucld_branchRates=-266.168517335019,lnP=-55147.072449068786,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.652620321432614E-4]:7.592704581392E0,9[&rate=7.771326936980999E-4]:7.592704581392E0)[&rate=5.035459306776246E-4]:8.608973856204E0,15[&rate=6.317183248213777E-4]:1.62016784376E1)[&rate=7.216480158710325E-4]:9.870433820885E1,(14[&rate=9.370837054172511E-4]:5.288266548308E1,24[&rate=7.927336427475211E-4]:5.288266548308E1)[&rate=8.654936115848181E-4]:6.202335116336E1)[&rate=7.346375929791303E-4]:1.282338558147E1,((((((33[&rate=8.0922084995333E-4]:6.46890875665E1,13[&rate=3.1287583172408625E-4]:6.46890875665E1)[&rate=3.440216584793952E-4]:8.288914550639E0,(11[&rate=4.0247847560685767E-4]:1.728590908053E1,29[&rate=8.45416720369157E-4]:1.728590908053E1)[&rate=4.7728033337744773E-4]:5.569209303661E1)[&rate=9.370837054172511E-4]:4.78206423631E-1,(19[&rate=8.45416720369157E-4]:1.464858328285E1,18[&rate=4.7728033337744773E-4]:1.464858328285E1)[&rate=4.125811897985043E-4]:5.880762525792E1)[&rate=5.652620321432614E-4]:3.220442681975E0,((10[&rate=6.740787280132809E-4]:2.364061538933E1,31[&rate=5.835376218883927E-4]:2.364061538933E1)[&rate=3.695390785618332E-4]:5.154929985531E1,23[&rate=4.8607148265119205E-4]:7.518991524465E1)[&rate=3.81061352327827E-4]:1.486735978102E0)[&rate=3.440216584793952E-4]:2.130862840308E0,((((16[&rate=5.652620321432614E-4]:3.423425326195E1,((22[&rate=3.572713085587252E-4]:2.693479030599E0,21[&rate=7.216480158710325E-4]:2.693479030599E0)[&rate=5.928558951560467E-4]:5.950936372554E0,20[&rate=6.630789720936844E-4]:8.644415403153E0)[&rate=0.001334218393912119]:2.55898378588E1)[&rate=8.267273288938588E-4]:3.952964166015E1,(((30[&rate=8.654936115848181E-4]:5.213252237947E1,26[&rate=3.920016275581878E-4]:5.213252237947E1)[&rate=0.001334218393912119]:1.168957951452E1,32[&rate=5.385276853270761E-4]:6.3822101894E1)[&rate=3.440216584793952E-4]:6.487822228984E0,((((2[&rate=6.317183248213777E-4]:1.7721667106E0,4[&rate=8.0922084995333E-4]:1.7721667106E0)[&rate=4.948207106197941E-4]:7.6184676245E-1,3[&rate=4.0247847560685767E-4]:2.53401347305E0)[&rate=6.217282611317319E-4]:9.055895588666E0,5[&rate=4.8607148265119205E-4]:1.158990906172E1)[&rate=6.317183248213777E-4]:5.846941619641E-1,((7[&rate=5.385276853270761E-4]:6.620574002694E0,6[&rate=4.8607148265119205E-4]:6.620574002694E0)[&rate=6.217282611317319E-4]:7.367999930045E-1,1[&rate=3.294264563509383E-4]:7.357373995699E0)[&rate=3.1287583172408625E-4]:4.817229227981E0)[&rate=5.209901184827933E-4]:5.81353208993E1)[&rate=4.7728033337744773E-4]:3.453970799125E0)[&rate=5.835376218883927E-4]:4.133117257013E-1,12[&rate=5.652620321432614E-4]:7.417720664781E1)[&rate=7.346375929791303E-4]:2.976062460298E0,25[&rate=6.523700486150057E-4]:7.715326910811E1)[&rate=8.0922084995333E-4]:1.654244954949E0)[&rate=5.385276853270761E-4]:5.545642514559E0,(17[&rate=7.216480158710325E-4]:7.446874723466E1,(27[&rate=4.5949216514289327E-4]:2.515508450857E1,28[&rate=0.001083963892840059]:2.515508450857E1)[&rate=6.523700486150057E-4]:4.931366272609E1)[&rate=7.091436198285539E-4]:9.884409342952E0)[&rate=0.001083963892840059]:4.33762456503E1); +tree STATE_530000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55117.26040828159,EEF_ucld_branchRates=-266.168517335019,lnP=-55117.26040828159,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.257177588764174E-4]:9.231085824981E0,9[&rate=5.205810642982964E-4]:9.231085824981E0)[&rate=5.103241416379793E-4]:9.200446272761E0,15[&rate=3.470563957593068E-4]:1.843153209774E1)[&rate=6.836142549244299E-4]:9.794741777937E1,(14[&rate=0.0015739964167323143]:5.308306381436E1,24[&rate=5.826133124813159E-4]:5.308306381436E1)[&rate=0.001248464051275422]:6.329588606275E1)[&rate=8.806419981079513E-4]:1.165388213658E1,((((((33[&rate=6.147323829414381E-4]:6.56916420269E1,13[&rate=4.2504601801741736E-4]:6.56916420269E1)[&rate=3.3067320363416684E-4]:1.13099326392E1,(11[&rate=4.014660004519184E-4]:1.693100290228E1,29[&rate=4.1345294768868753E-4]:1.693100290228E1)[&rate=7.215763734906812E-4]:6.007057176382E1)[&rate=9.228683476942878E-4]:1.872656053973E0,(19[&rate=5.826133124813159E-4]:1.648272451658E1,18[&rate=6.147323829414381E-4]:1.648272451658E1)[&rate=3.3067320363416684E-4]:6.239150620349E1)[&rate=7.930246329912181E-4]:1.254895424997E0,((10[&rate=9.01096544718218E-4]:1.995016566889E1,31[&rate=5.721273902861035E-4]:1.995016566889E1)[&rate=3.889882658390005E-4]:5.954938703198E1,23[&rate=5.000395224533744E-4]:7.949955270087E1)[&rate=9.01096544718218E-4]:6.295734441969E-1)[&rate=5.721273902861035E-4]:1.610835999084E0,((12[&rate=7.930246329912181E-4]:7.483152743982E1,((((((2[&rate=9.712680273607862E-4]:1.663172405658E0,4[&rate=7.77712355019981E-4]:1.663172405658E0)[&rate=0.0010613009278490758]:3.34831895977E-1,3[&rate=6.597760757160658E-4]:1.998004301635E0)[&rate=9.712680273607862E-4]:7.250443307231E0,5[&rate=6.836142549244299E-4]:9.248447608866E0)[&rate=6.959457638028567E-4]:1.768034095583E0,((7[&rate=8.256019552851012E-4]:7.836307398347E0,6[&rate=5.513839136884972E-4]:7.836307398347E0)[&rate=7.215763734906812E-4]:6.315949507437E-1,1[&rate=5.308307175430273E-4]:8.46790234909E0)[&rate=3.758914150749859E-4]:2.548579355358E0)[&rate=5.000395224533744E-4]:6.11067726071E1,((30[&rate=6.257177588764174E-4]:5.167297943878E1,26[&rate=5.000395224533744E-4]:5.167297943878E1)[&rate=3.758914150749859E-4]:1.290973213381E1,32[&rate=6.257177588764174E-4]:6.45827115726E1)[&rate=6.715663903729346E-4]:7.540542738952E0)[&rate=8.089635072569146E-4]:1.561796792262E0,(16[&rate=4.897051117762453E-4]:3.445976023518E1,((22[&rate=0.0010613009278490758]:2.799213825833E0,21[&rate=3.121963918908909E-4]:2.799213825833E0)[&rate=6.836142549244299E-4]:7.12966344086E0,20[&rate=9.01096544718218E-4]:9.928877266693E0)[&rate=0.0014216835675038805]:2.453088296849E1)[&rate=8.806419981079513E-4]:3.922529086863E1)[&rate=9.461700683135753E-4]:1.146476336014E0)[&rate=5.103241416379793E-4]:4.491027915718E0,25[&rate=5.205810642982964E-4]:7.932255535554E1)[&rate=4.2504601801741736E-4]:2.41740678861E0)[&rate=3.6199896071503984E-4]:3.602570394817E0,(17[&rate=7.349412974087319E-4]:8.038213159E1,(27[&rate=6.257177588764174E-4]:2.374572205479E1,28[&rate=9.01096544718218E-4]:2.374572205479E1)[&rate=8.089635072569146E-4]:5.663640953521E1)[&rate=3.121963918908909E-4]:4.960400948968E0)[&rate=0.001248464051275422]:4.269029947472E1); +tree STATE_540000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.6839498887,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.6839498887,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.601078162538218E-4]:6.024983097303E0,9[&rate=0.0017223085679575778]:6.024983097303E0)[&rate=4.7434356281737176E-4]:1.112680314533E1,15[&rate=2.8473967076380946E-4]:1.715178624263E1)[&rate=9.811302136960125E-4]:9.201265634906E1,(14[&rate=8.588552835648221E-4]:4.962179823954E1,24[&rate=9.537194013706145E-4]:4.962179823954E1)[&rate=6.67828743374552E-4]:5.954264435215E1)[&rate=6.977304756559134E-4]:1.487606946161E1,((((((33[&rate=6.977304756559134E-4]:5.685482104423E1,13[&rate=4.0090188443587307E-4]:5.685482104423E1)[&rate=2.6523567399526114E-4]:1.509104815267E1,(11[&rate=5.728033379507144E-4]:1.622947790846E1,29[&rate=6.825870306815722E-4]:1.622947790846E1)[&rate=6.977304756559134E-4]:5.571639128844E1)[&rate=6.977304756559134E-4]:1.068230333946E0,(19[&rate=4.985049607393941E-4]:1.48329176442E1,18[&rate=3.479332917861423E-4]:1.48329176442E1)[&rate=2.4255676595157476E-4]:5.818118188666E1)[&rate=7.458521093466837E-4]:1.517386571796E0,((10[&rate=9.537194013706145E-4]:2.199842159625E1,31[&rate=0.001076260650735581]:2.199842159625E1)[&rate=3.335341874018493E-4]:5.134778103831E1,23[&rate=4.7434356281737176E-4]:7.334620263457E1)[&rate=5.351541093882894E-4]:1.185283468081E0)[&rate=7.629369793467786E-4]:2.104485025559E0,((12[&rate=8.807067892588217E-4]:7.31101640712E1,((((((2[&rate=9.811302136960125E-4]:2.556417784157E0,4[&rate=0.0012006830219375873]:2.556417784157E0)[&rate=4.7434356281737176E-4]:5.070189822278E-1,3[&rate=5.106451001902365E-4]:3.063436766385E0)[&rate=7.629369793467786E-4]:6.469092797542E0,5[&rate=4.6227499184916344E-4]:9.532529563928E0)[&rate=8.380209408445003E-4]:1.979542491016E0,((7[&rate=2.6523567399526114E-4]:6.826199770219E0,6[&rate=9.811302136960125E-4]:6.826199770219E0)[&rate=5.728033379507144E-4]:2.799789780145E-1,1[&rate=4.0090188443587307E-4]:7.106178748234E0)[&rate=9.811302136960125E-4]:4.40589330671E0)[&rate=3.335341874018493E-4]:5.737894220641E1,((30[&rate=5.987377802607197E-4]:5.129560647601E1,26[&rate=5.601078162538218E-4]:5.129560647601E1)[&rate=6.255459956747897E-4]:9.681373336002E0,32[&rate=2.8473967076380946E-4]:6.097697981201E1)[&rate=5.106451001902365E-4]:7.91403444935E0)[&rate=4.7434356281737176E-4]:1.562541100997E0,(16[&rate=4.8641209317651883E-4]:3.170511200346E1,((22[&rate=0.001154799286743911]:3.174676404585E0,21[&rate=6.534224722715123E-4]:3.174676404585E0)[&rate=0.0014671562803098333]:4.445351181411E0,20[&rate=3.751335617973711E-4]:7.620027585996E0)[&rate=0.0014671562803098333]:2.408508441746E1)[&rate=0.001076260650735581]:3.87484433589E1)[&rate=0.001076260650735581]:2.656608708848E0)[&rate=5.987377802607197E-4]:2.13047242779E0,25[&rate=6.120209986957139E-4]:7.524063649899E1)[&rate=3.022488681398337E-4]:1.395334629213E0)[&rate=8.588552835648221E-4]:5.473609309463E0,(17[&rate=9.811302136960125E-4]:7.426912913977E1,(27[&rate=3.6175775393176173E-4]:2.445134170254E1,28[&rate=8.588552835648221E-4]:2.445134170254E1)[&rate=6.120209986957139E-4]:4.981778743723E1)[&rate=8.588552835648221E-4]:7.840451297897E0)[&rate=0.0017223085679575778]:4.193093161563E1); +tree STATE_550000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55134.77175171959,EEF_ucld_branchRates=-266.168517335019,lnP=-55134.77175171959,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.856276334827377E-4]:7.101964646792E0,9[&rate=0.0010892467460903038]:7.101964646792E0)[&rate=6.184205661440152E-4]:9.777972318652E0,15[&rate=5.067286770661846E-4]:1.687993696544E1)[&rate=7.514793879777766E-4]:8.541852406936E1,(14[&rate=9.355233524877536E-4]:4.22569845519E1,24[&rate=0.0011287621723145727]:4.22569845519E1)[&rate=9.619064956551843E-4]:6.004147648291E1)[&rate=5.672027967754349E-4]:2.107394674675E1,((((((33[&rate=8.441046814677798E-4]:5.767766451718E1,13[&rate=4.94902037098036E-4]:5.767766451718E1)[&rate=2.6641252686239664E-4]:1.208787238519E1,(11[&rate=3.477257137209998E-4]:1.37268121835E1,29[&rate=3.8714013623857994E-4]:1.37268121835E1)[&rate=9.355233524877536E-4]:5.603872471887E1)[&rate=4.713485650191293E-4]:1.158124551021E0,(19[&rate=4.5957539994609804E-4]:1.507932716258E1,18[&rate=6.59422766606158E-4]:1.507932716258E1)[&rate=3.187214802097336E-4]:5.584433429081E1)[&rate=3.8714013623857994E-4]:1.850931149357E0,((10[&rate=8.441046814677798E-4]:1.998244341081E1,31[&rate=5.923978617622986E-4]:1.998244341081E1)[&rate=2.6641252686239664E-4]:5.263803002329E1,23[&rate=8.441046814677798E-4]:7.26204734341E1)[&rate=4.5957539994609804E-4]:1.541191686458E-1)[&rate=5.305890491180718E-4]:1.760892740707E0,((12[&rate=9.355233524877536E-4]:7.225110405804E1,((((30[&rate=8.240026714055555E-4]:4.992030256652E1,26[&rate=9.619064956551843E-4]:4.992030256652E1)[&rate=3.9961304694940443E-4]:5.681050629534E0,32[&rate=3.335961073340522E-4]:5.560135319605E1)[&rate=6.184205661440152E-4]:1.136369708713E1,((((2[&rate=6.88389724162212E-4]:2.407088130004E0,4[&rate=6.88389724162212E-4]:2.407088130004E0)[&rate=0.0016710642870678466]:7.427362759659E-1,3[&rate=8.873421003401454E-4]:3.14982440597E0)[&rate=0.0015307110572299178]:6.171497873536E0,5[&rate=4.713485650191293E-4]:9.321322279506E0)[&rate=9.107351186919553E-4]:3.064884335624E0,((7[&rate=6.737226223755058E-4]:6.69124804804E0,6[&rate=0.0010204887046755136]:6.69124804804E0)[&rate=5.923978617622986E-4]:1.32787970332E0,1[&rate=2.856276334827377E-4]:8.01912775136E0)[&rate=5.923978617622986E-4]:4.36707886377E0)[&rate=5.067286770661846E-4]:5.457884366806E1)[&rate=7.514793879777766E-4]:1.907344663352E0,(16[&rate=2.856276334827377E-4]:3.34485455509E1,((22[&rate=5.548615741116706E-4]:3.399338140458E0,21[&rate=2.856276334827377E-4]:3.399338140458E0)[&rate=9.355233524877536E-4]:4.464434729426E0,20[&rate=7.685808844541103E-4]:7.863772869884E0)[&rate=0.0015307110572299178]:2.558477268101E1)[&rate=0.0010892467460903038]:3.542384939564E1)[&rate=0.0011727651552971856]:3.378709111502E0)[&rate=4.5957539994609804E-4]:1.678847256863E0,25[&rate=6.88389724162212E-4]:7.39299513149E1)[&rate=6.454583495636735E-4]:6.055340285553E-1)[&rate=5.426637206247535E-4]:4.870131547916E0,(17[&rate=5.672027967754349E-4]:7.070003816619E1,(27[&rate=4.8311614614401243E-4]:2.527447139008E1,28[&rate=8.441046814677798E-4]:2.527447139008E1)[&rate=6.737226223755058E-4]:4.542556677611E1)[&rate=3.612812429890535E-4]:8.705578725184E0)[&rate=0.0015307110572299178]:4.396679089018E1); +tree STATE_560000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55123.693666954845,EEF_ucld_branchRates=-266.168517335019,lnP=-55123.693666954845,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.227791069818815E-4]:9.344138102472E0,9[&rate=9.713426626699263E-4]:9.344138102472E0)[&rate=3.705506199848558E-4]:6.68098265132E0,15[&rate=6.401824521520237E-4]:1.602512075379E1)[&rate=5.702043875699311E-4]:9.82268921562E1,(14[&rate=9.020233380184819E-4]:4.655854286069E1,24[&rate=0.0010261025341100532]:4.655854286069E1)[&rate=9.237378175942788E-4]:6.76934700493E1)[&rate=9.976809714778885E-4]:1.228602915188E1,((((((33[&rate=0.0011284904831191593]:5.962846412641E1,13[&rate=6.162615419543988E-4]:5.962846412641E1)[&rate=7.039457819598852E-4]:1.231267656479E1,(11[&rate=5.144165190909185E-4]:1.426645391723E1,29[&rate=9.020233380184819E-4]:1.426645391723E1)[&rate=7.761227772678859E-4]:5.767468677397E1)[&rate=0.0010570036208299692]:2.304791909244E0,(19[&rate=6.162615419543988E-4]:1.465885870828E1,18[&rate=7.039457819598852E-4]:1.465885870828E1)[&rate=5.589511424597178E-4]:5.958707389217E1)[&rate=4.809351318956731E-4]:2.300999559744E0,((10[&rate=5.255177895379145E-4]:2.050649718258E1,31[&rate=9.020233380184819E-4]:2.050649718258E1)[&rate=3.229421388008123E-4]:5.549429475905E1,23[&rate=4.104193254345321E-4]:7.600079194163E1)[&rate=5.589511424597178E-4]:5.461402185572E-1)[&rate=3.036214840896357E-4]:1.753808985389E0,((12[&rate=9.237378175942788E-4]:7.483510827687E1,((((((2[&rate=5.702043875699311E-4]:2.061165105219E0,4[&rate=6.77642305852951E-4]:2.061165105219E0)[&rate=6.649150422098425E-4]:1.151059737129E0,3[&rate=4.921496506210746E-4]:3.212224842348E0)[&rate=3.229421388008123E-4]:6.708748794196E0,5[&rate=3.036214840896357E-4]:9.920973636544E0)[&rate=6.906434415868436E-4]:2.746411146727E0,((7[&rate=8.433141179243915E-4]:7.988113509819E0,6[&rate=6.281312279548298E-4]:7.988113509819E0)[&rate=4.227791069818815E-4]:1.006643047556E0,1[&rate=2.809200337149651E-4]:8.994756557375E0)[&rate=7.608056382934968E-4]:3.672628225897E0)[&rate=6.281312279548298E-4]:5.695373924866E1,((30[&rate=6.906434415868436E-4]:4.989492981499E1,26[&rate=8.254995771396156E-4]:4.989492981499E1)[&rate=9.237378175942788E-4]:1.165168597377E1,32[&rate=4.921496506210746E-4]:6.154661578876E1)[&rate=5.477650579115066E-4]:8.074508243173E0)[&rate=3.229421388008123E-4]:1.8419131996E0,(16[&rate=5.929868456047867E-4]:3.567328467472E1,((22[&rate=7.608056382934968E-4]:3.504663281535E0,21[&rate=8.433141179243915E-4]:3.504663281535E0)[&rate=5.366271390097779E-4]:3.826654970895E0,20[&rate=8.433141179243915E-4]:7.33131825243E0)[&rate=0.001428801108536912]:2.834196642229E1)[&rate=0.0010570036208299692]:3.578975255681E1)[&rate=0.001428801108536912]:3.37207104534E0)[&rate=5.033015993787605E-4]:2.134698765557E0,25[&rate=7.039457819598852E-4]:7.696980704243E1)[&rate=3.705506199848558E-4]:1.330934103148E0)[&rate=8.619378789544156E-4]:3.945330185474E0,(17[&rate=8.254995771396156E-4]:7.690958863828E1,(27[&rate=4.348230801678755E-4]:2.77454426535E1,28[&rate=0.0015442640644243387]:2.77454426535E1)[&rate=5.033015993787605E-4]:4.916414598479E1)[&rate=3.705506199848558E-4]:5.336482692767E0)[&rate=0.0015442640644243387]:4.429197073082E1); +tree STATE_570000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55121.59887290825,EEF_ucld_branchRates=-266.168517335019,lnP=-55121.59887290825,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.371923547322015E-4]:7.414524421527E0,9[&rate=8.403806945302895E-4]:7.414524421527E0)[&rate=4.208266589297074E-4]:9.188213459865E0,15[&rate=3.8735368654105947E-4]:1.660273788139E1)[&rate=9.514474344142586E-4]:9.901670902308E1,(14[&rate=8.403806945302895E-4]:5.004723836038E1,24[&rate=8.653641601291619E-4]:5.004723836038E1)[&rate=9.849366034619745E-4]:6.557220854409E1)[&rate=5.509149184181908E-4]:1.129395089836E1,((((((11[&rate=4.433138184618361E-4]:1.578264850021E1,29[&rate=3.8735368654105947E-4]:1.578264850021E1)[&rate=0.00102159174674798]:5.577273150515E1,(19[&rate=5.90879914922077E-4]:1.548754620737E1,18[&rate=6.048720037069035E-4]:1.548754620737E1)[&rate=4.546723755750391E-4]:5.606783379799E1)[&rate=0.00110733521720897]:1.964894723073E0,(33[&rate=7.534616781467328E-4]:6.405317280906E1,13[&rate=2.809641605015249E-4]:6.405317280906E1)[&rate=2.198393149102446E-4]:9.46710191937E0)[&rate=6.048720037069035E-4]:1.855439619252E0,((10[&rate=4.7771815469699536E-4]:1.794031394323E1,31[&rate=5.134018543915878E-4]:1.794031394323E1)[&rate=2.809641605015249E-4]:5.694675288483E1,23[&rate=4.208266589297074E-4]:7.488706682806E1)[&rate=1.3516397213390443E-4]:4.886475196282E-1)[&rate=2.198393149102446E-4]:2.64994313141E0,((12[&rate=8.920212659354561E-4]:7.339493810264E1,((((((2[&rate=0.00102159174674798]:2.009442206673E0,4[&rate=6.192515080056104E-4]:2.009442206673E0)[&rate=3.5359681459045213E-4]:5.334942926921E-1,3[&rate=7.534616781467328E-4]:2.542936499365E0)[&rate=5.256742307703744E-4]:7.022107245113E0,5[&rate=3.305030587553051E-4]:9.565043744478E0)[&rate=3.985071409374576E-4]:3.542652780996E0,((7[&rate=5.256742307703744E-4]:7.797448138878E0,6[&rate=0.0014807386033619504]:7.797448138878E0)[&rate=5.256742307703744E-4]:1.042530590272E0,1[&rate=2.371923547322015E-4]:8.83997872915E0)[&rate=8.403806945302895E-4]:4.267717796324E0)[&rate=4.7771815469699536E-4]:5.873203209131E1,((30[&rate=7.159541190786925E-4]:4.890464250274E1,26[&rate=6.814155102200703E-4]:4.890464250274E1)[&rate=5.256742307703744E-4]:1.338069957709E1,32[&rate=4.7771815469699536E-4]:6.228534207983E1)[&rate=3.1864446943750426E-4]:9.554386536958E0)[&rate=4.6613400167904687E-4]:9.349092781761E-1,(16[&rate=4.096568779026747E-4]:3.502475153512E1,((22[&rate=8.403806945302895E-4]:2.435269342414E0,21[&rate=2.371923547322015E-4]:2.435269342414E0)[&rate=7.735359754825262E-4]:4.087976660926E0,20[&rate=5.90879914922077E-4]:6.52324600334E0)[&rate=0.0014807386033619504]:2.850150553178E1)[&rate=7.735359754825262E-4]:3.774988635984E1)[&rate=0.0016294541796487792]:6.20300207679E-1)[&rate=6.983497426741701E-4]:3.474229787908E0,25[&rate=6.192515080056104E-4]:7.686916789055E1)[&rate=4.3203864186553803E-4]:1.156489588544E0)[&rate=2.809641605015249E-4]:1.585755053677E0,(17[&rate=9.206094248933696E-4]:7.296784163355E1,(27[&rate=3.305030587553051E-4]:2.847322691728E1,28[&rate=7.735359754825262E-4]:2.847322691728E1)[&rate=6.048720037069035E-4]:4.449461471627E1)[&rate=7.735359754825262E-4]:6.64357089922E0)[&rate=0.0016294541796487792]:4.730198527006E1); +tree STATE_580000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55122.90919330829,EEF_ucld_branchRates=-266.168517335019,lnP=-55122.90919330829,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.073182348482795E-4]:1.005158598945E1,9[&rate=0.0011249668632427373]:1.005158598945E1)[&rate=7.859927683339262E-4]:9.407881716792E0,15[&rate=5.49717060950495E-4]:1.945946770624E1)[&rate=8.007043620768064E-4]:9.49997633783E1,(14[&rate=0.0010721448433929203]:4.565064779511E1,24[&rate=6.289022541132086E-4]:4.565064779511E1)[&rate=7.335075544429201E-4]:6.880858328944E1)[&rate=5.840330871149024E-4]:1.448409062713E1,((((((11[&rate=5.582204578543717E-4]:1.243298583834E1,29[&rate=4.725430669764968E-4]:1.243298583834E1)[&rate=6.382887586018736E-4]:5.921100571394E1,(33[&rate=7.101777216282804E-4]:6.398546412751E1,13[&rate=5.840330871149024E-4]:6.398546412751E1)[&rate=8.007043620768064E-4]:7.658527424772E0)[&rate=5.243140660909321E-4]:1.006481993832E0,(19[&rate=8.690667150912635E-4]:1.422169598114E1,18[&rate=7.859927683339262E-4]:1.422169598114E1)[&rate=2.907323940303518E-4]:5.842877756498E1)[&rate=5.49717060950495E-4]:1.626029579354E0,((10[&rate=7.335075544429201E-4]:1.793742145853E1,31[&rate=6.382887586018736E-4]:1.793742145853E1)[&rate=3.928420236667655E-4]:5.488675538875E1,23[&rate=5.243140660909321E-4]:7.282417684728E1)[&rate=8.690667150912635E-4]:1.452326278187E0)[&rate=5.840330871149024E-4]:3.142138246732E0,((12[&rate=9.115605735636263E-4]:7.633541680362E1,((((((2[&rate=4.987524671733476E-4]:1.844154290281E0,4[&rate=3.928420236667655E-4]:1.844154290281E0)[&rate=6.19674948795309E-4]:6.744708974818E-1,3[&rate=4.353719782692402E-4]:2.518625187763E0)[&rate=5.412410807690452E-4]:7.256019307263E0,5[&rate=4.150764150736097E-4]:9.774644495026E0)[&rate=7.335075544429201E-4]:2.676404296606E0,((7[&rate=6.016313227096871E-4]:8.456928615723E0,6[&rate=3.928420236667655E-4]:8.456928615723E0)[&rate=4.543895942923255E-4]:9.069536474169E-1,1[&rate=6.382887586018736E-4]:9.36388226314E0)[&rate=3.3633639119518856E-4]:3.087166528492E0)[&rate=6.382887586018736E-4]:5.892796224113E1,((30[&rate=7.21642464826822E-4]:5.365837463484E1,26[&rate=7.458184409838716E-4]:5.365837463484E1)[&rate=8.326935734224053E-4]:1.036134673426E1,32[&rate=3.5290688317806817E-4]:6.401972136909E1)[&rate=3.5290688317806817E-4]:7.359289663672E0)[&rate=6.382887586018736E-4]:3.006959028485E0,(16[&rate=5.840330871149024E-4]:3.543332251284E1,((22[&rate=7.458184409838716E-4]:2.554781394637E0,21[&rate=5.243140660909321E-4]:2.554781394637E0)[&rate=5.412410807690452E-4]:3.843562594508E0,20[&rate=4.353719782692402E-4]:6.398343989144E0)[&rate=0.0013014280581259644]:2.903497852369E1)[&rate=6.882946189499975E-4]:3.895264754841E1)[&rate=7.719951617584359E-4]:1.949446742367E0)[&rate=4.901161480538242E-4]:5.057841559761E-3,25[&rate=7.101777216282804E-4]:7.634047464518E1)[&rate=9.631538180808008E-4]:1.078166727027E0)[&rate=3.3633639119518856E-4]:4.221021074444E0,(17[&rate=8.162306258340493E-4]:7.513378468005E1,(27[&rate=4.725430669764968E-4]:3.105433862766E1,28[&rate=8.502431685431218E-4]:3.105433862766E1)[&rate=5.927838927102842E-4]:4.407944605239E1)[&rate=3.3633639119518856E-4]:6.505877766595E0)[&rate=0.0011952255661917912]:4.730365926503E1); +tree STATE_590000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55148.89900056519,EEF_ucld_branchRates=-266.168517335019,lnP=-55148.89900056519,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.921176494036553E-4]:1.102834436041E1,9[&rate=0.0015516551865189091]:1.102834436041E1)[&rate=5.255208686775656E-4]:1.092317927216E1,15[&rate=4.5842186344249283E-4]:2.195152363257E1)[&rate=6.939386387796627E-4]:8.70061817492E1,(14[&rate=0.0011684431188276109]:4.026965197453E1,24[&rate=7.829525075594652E-4]:4.026965197453E1)[&rate=8.349833448816669E-4]:6.868805340724E1)[&rate=4.236523198077805E-4]:1.239958032144E1,((((((11[&rate=8.349833448816669E-4]:1.156970120469E1,29[&rate=7.66906690363918E-4]:1.156970120469E1)[&rate=6.673911272936223E-4]:5.542652280531E1,(33[&rate=5.366961551810883E-4]:6.220119373994E1,13[&rate=5.937585226751709E-4]:6.220119373994E1)[&rate=8.945745883925062E-4]:4.795030270072E0)[&rate=5.366961551810883E-4]:1.334236891886E0,(19[&rate=5.255208686775656E-4]:1.585597216831E1,18[&rate=6.296271905809806E-4]:1.585597216831E1)[&rate=2.7081248730220786E-4]:5.247448873359E1)[&rate=0.0010523222155720136]:2.10320474044E0,((10[&rate=6.055399959217143E-4]:2.082162567361E1,31[&rate=9.918689945736955E-4]:2.082162567361E1)[&rate=2.9325045712091187E-4]:4.713088185251E1,23[&rate=6.673911272936223E-4]:6.795250752613E1)[&rate=4.921176494036553E-4]:2.481158116207E0)[&rate=5.592274340376636E-4]:3.290221525307E0,((12[&rate=9.166395279252869E-4]:6.921467261608E1,((((30[&rate=7.829525075594652E-4]:4.631932545356E1,26[&rate=7.829525075594652E-4]:4.631932545356E1)[&rate=0.001086903681829974]:9.969879755201E0,32[&rate=6.055399959217143E-4]:5.628920520876E1)[&rate=0.0013451844950867688]:7.413351818646E0,((((3[&rate=5.706212068306912E-4]:2.245545644729E0,4[&rate=6.673911272936223E-4]:2.245545644729E0)[&rate=4.5842186344249283E-4]:5.53169187433E-1,2[&rate=8.349833448816669E-4]:2.798714832162E0)[&rate=3.5963034376734033E-4]:7.52558202731E0,5[&rate=3.5963034376734033E-4]:1.032429685947E1)[&rate=9.400647514503672E-4]:1.628843178246E0,((7[&rate=3.8660978660875556E-4]:6.49704251089E0,1[&rate=6.805098126158877E-4]:6.49704251089E0)[&rate=6.055399959217143E-4]:1.882192157037E0,6[&rate=6.419747529942557E-4]:8.379234667927E0)[&rate=9.166395279252869E-4]:3.573905369791E0)[&rate=6.419747529942557E-4]:5.174941698969E1)[&rate=3.294293412854509E-4]:3.486285733539E0,(16[&rate=3.5963034376734033E-4]:2.794011422623E1,((22[&rate=8.945745883925062E-4]:1.977838295937E0,21[&rate=4.35422831186986E-4]:1.977838295937E0)[&rate=6.939386387796627E-4]:2.649965879885E0,20[&rate=4.809515346522184E-4]:4.627804175821E0)[&rate=0.0021474570831067886]:2.331231005041E1)[&rate=0.0010208216238872343]:3.924872853472E1)[&rate=5.366961551810883E-4]:2.025829855134E0)[&rate=1.9567683275357046E-4]:2.785204053282E0,25[&rate=8.16920785142191E-4]:7.199987666936E1)[&rate=5.592274340376636E-4]:1.72401049828E0)[&rate=2.9325045712091187E-4]:1.546516751932E0,(17[&rate=8.945745883925062E-4]:6.240760149321E1,(27[&rate=4.116366568494394E-4]:2.594413137901E1,28[&rate=8.349833448816669E-4]:2.594413137901E1)[&rate=9.650564242372144E-4]:3.646347011419E1)[&rate=2.7081248730220786E-4]:1.286280242637E1)[&rate=0.0017352899353730025]:4.608688178363E1); +tree STATE_600000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55148.824978126184,EEF_ucld_branchRates=-266.168517335019,lnP=-55148.824978126184,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.973979920217328E-4]:9.415685509962E0,9[&rate=5.246415580661787E-4]:9.415685509962E0)[&rate=6.793175993071832E-4]:4.226605532773E0,15[&rate=3.3484310469936916E-4]:1.364229104274E1)[&rate=6.407065003852507E-4]:1.055493271249E2,(14[&rate=0.0015882413403219033]:3.849840645773E1,24[&rate=9.080273226494311E-4]:3.849840645773E1)[&rate=8.222328177814041E-4]:8.06932117099E1)[&rate=4.880504666632778E-4]:8.32043258342E0,((((((11[&rate=6.793175993071832E-4]:1.106168195151E1,29[&rate=5.775680655021668E-4]:1.106168195151E1)[&rate=6.596850113428341E-4]:5.526019751036E1,(33[&rate=5.952588127494935E-4]:5.674804587241E1,13[&rate=5.511949881136266E-4]:5.674804587241E1)[&rate=7.679725927898979E-4]:9.57383358946E0)[&rate=4.263296455363363E-4]:1.484413699655E0,(19[&rate=4.880504666632778E-4]:1.685088077651E1,18[&rate=5.423864743030337E-4]:1.685088077651E1)[&rate=7.438387966609007E-4]:5.095541238501E1)[&rate=7.556998085018953E-4]:3.406130846942E0,((10[&rate=8.885964251143254E-4]:2.014593220171E1,31[&rate=7.939476782968262E-4]:2.014593220171E1)[&rate=3.5549349399876075E-4]:4.951067870665E1,23[&rate=5.156664372168541E-4]:6.965661090836E1)[&rate=2.6226363487066076E-4]:1.555813100102E0)[&rate=6.314194498928822E-4]:2.041678358407E0,((12[&rate=8.374339133771018E-4]:6.938947630495E1,((((30[&rate=7.556998085018953E-4]:4.56460878375E1,26[&rate=6.131711402582346E-4]:4.56460878375E1)[&rate=0.0011173534039416592]:7.402023444973E0,32[&rate=6.041801811417088E-4]:5.304811128247E1)[&rate=4.263296455363363E-4]:1.185421600796E1,((((3[&rate=6.407065003852507E-4]:2.036401913423E0,4[&rate=6.694103820964997E-4]:2.036401913423E0)[&rate=8.704758743610079E-4]:2.551939419551E-1,2[&rate=3.3484310469936916E-4]:2.291595855378E0)[&rate=8.374339133771018E-4]:7.056880239249E0,5[&rate=4.144344339062653E-4]:9.348476094627E0)[&rate=6.222460214317763E-4]:1.63922155518E0,((7[&rate=4.587284287319711E-4]:7.052477068832E0,1[&rate=3.727897955071885E-4]:7.052477068832E0)[&rate=3.3484310469936916E-4]:1.234509625451E0,6[&rate=5.599841643572704E-4]:8.286986694284E0)[&rate=7.679725927898979E-4]:2.700710955523E0)[&rate=5.599841643572704E-4]:5.391462964062E1)[&rate=8.077662552808429E-4]:9.269471153273E-1,(16[&rate=4.3759795047140077E-4]:3.132457949844E1,((22[&rate=6.694103820964997E-4]:1.601593538146E0,21[&rate=5.863928436510923E-4]:1.601593538146E0)[&rate=7.323485452406963E-4]:3.65616428939E0,20[&rate=8.53473104559196E-4]:5.257757827536E0)[&rate=0.0012439794671556719]:2.60668216709E1)[&rate=9.518736239874024E-4]:3.450469490732E1)[&rate=8.222328177814041E-4]:3.560201899194E0)[&rate=0.001005075623274302]:7.535685100299E-1,25[&rate=7.438387966609007E-4]:7.014304481498E1)[&rate=5.065936775530302E-4]:3.111057551891E0)[&rate=6.131711402582346E-4]:2.417125640812E0,(17[&rate=7.807039415098549E-4]:6.615309471264E1,(27[&rate=4.587284287319711E-4]:2.167704190426E1,28[&rate=8.885964251143254E-4]:2.167704190426E1)[&rate=5.599841643572704E-4]:4.447605280838E1)[&rate=6.407065003852507E-4]:9.518133295039E0)[&rate=0.001353112988866289]:5.184082274336E1); +tree STATE_610000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55156.057422954385,EEF_ucld_branchRates=-266.168517335019,lnP=-55156.057422954385,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.576843095529489E-4]:6.391530262002E0,9[&rate=8.560175426265173E-4]:6.391530262002E0)[&rate=8.317512794920563E-4]:7.644471854183E0,15[&rate=6.243684738623953E-4]:1.403600211618E1)[&rate=0.0011012929157995187]:1.060915498226E2,(14[&rate=0.0012888582522911187]:4.163007361528E1,24[&rate=7.229709701203369E-4]:4.163007361528E1)[&rate=7.783593935982723E-4]:7.849747832349E1)[&rate=5.576843095529489E-4]:6.175061700534E0,((((((11[&rate=6.974049256254913E-4]:1.105691885067E1,29[&rate=6.726868293867452E-4]:1.105691885067E1)[&rate=9.123788226885621E-4]:5.707971465408E1,(33[&rate=7.229709701203369E-4]:5.797792732191E1,13[&rate=5.098683281976282E-4]:5.797792732191E1)[&rate=7.317493917421152E-4]:1.015870618284E1)[&rate=6.974049256254913E-4]:1.518358369406E0,(19[&rate=5.750328161807866E-4]:1.512263026574E1,18[&rate=6.808546934529762E-4]:1.512263026574E1)[&rate=3.348175668690189E-4]:5.453236160841E1)[&rate=6.404298771412137E-4]:2.596036819732E0,((10[&rate=4.7528429563831735E-4]:2.236344201681E1,31[&rate=5.750328161807866E-4]:2.236344201681E1)[&rate=4.2985599320881704E-4]:4.930229482633E1,23[&rate=7.058140258977987E-4]:7.166573684313E1)[&rate=9.46334106094458E-4]:5.85291850753E-1)[&rate=8.203364467540117E-4]:2.628926603417E0,(25[&rate=6.645731922417099E-4]:7.353806930876E1,(12[&rate=8.970663548606376E-4]:7.215081778944E1,((((((4[&rate=6.808546934529762E-4]:1.822344746663E0,3[&rate=6.243684738623953E-4]:1.822344746663E0)[&rate=6.243684738623953E-4]:2.661344103313E-1,2[&rate=6.243684738623953E-4]:2.088479156994E0)[&rate=7.883776949717793E-4]:8.027164285042E0,5[&rate=4.092342578202177E-4]:1.011564344204E1)[&rate=8.689970372179339E-4]:1.5370409664E0,((7[&rate=7.986903297253645E-4]:6.977589804019E0,6[&rate=6.726868293867452E-4]:6.977589804019E0)[&rate=4.469639014061275E-4]:5.352652299159E-1,1[&rate=8.436253985490835E-4]:7.512855033935E0)[&rate=5.487199197356518E-4]:4.139829374501E0)[&rate=4.990575840395089E-4]:5.737322960977E1,((30[&rate=8.203364467540117E-4]:4.679732142644E1,26[&rate=8.093306160906909E-4]:4.679732142644E1)[&rate=8.970663548606376E-4]:1.422778084001E1,32[&rate=4.990575840395089E-4]:6.102510226645E1)[&rate=3.348175668690189E-4]:8.000811751757E0)[&rate=5.201526343250597E-4]:1.063049743311E0,(16[&rate=5.098683281976282E-4]:3.326359147358E1,((22[&rate=8.560175426265173E-4]:1.866797941675E0,21[&rate=6.082040743921694E-4]:1.866797941675E0)[&rate=4.092342578202177E-4]:3.697800926292E0,20[&rate=6.163066709546145E-4]:5.564598867967E0)[&rate=0.0012888582522911187]:2.769899260561E1)[&rate=7.883776949717793E-4]:3.682537228794E1)[&rate=7.317493917421152E-4]:2.06185402792E0)[&rate=7.883776949717793E-4]:1.387251519316E0)[&rate=6.082040743921694E-4]:1.341885988548E0)[&rate=7.229709701203369E-4]:5.002012253336E0,(17[&rate=9.287367906704824E-4]:6.760126738002E1,(27[&rate=8.317512794920563E-4]:2.135725998395E1,28[&rate=9.863354329822463E-4]:2.135725998395E1)[&rate=9.46334106094458E-4]:4.624400739607E1)[&rate=6.484575591028283E-4]:1.228070017062E1)[&rate=0.0012888582522911187]:4.642064608867E1); +tree STATE_620000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.842583902144,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.842583902144,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.057994878985228E-4]:9.10361116194E0,9[&rate=0.0010424528456968011]:9.10361116194E0)[&rate=0.0010424528456968011]:5.119046874131E0,15[&rate=3.7904033844692834E-4]:1.422265803607E1)[&rate=5.847207632301741E-4]:1.043469768724E2,(14[&rate=0.0017279256676925368]:3.787151842215E1,24[&rate=8.251767367575257E-4]:3.787151842215E1)[&rate=8.440429891114695E-4]:8.06981164863E1)[&rate=7.572336556107255E-4]:7.663960925248E0,((((((11[&rate=3.6598208577750673E-4]:1.26764614591E1,29[&rate=6.710968886686014E-4]:1.26764614591E1)[&rate=8.638438053249303E-4]:5.264726533724E1,(33[&rate=9.067479597193599E-4]:5.98003116024E1,13[&rate=5.503743148394561E-4]:5.98003116024E1)[&rate=0.0010424528456968011]:5.523415193946E0)[&rate=1.9050007481450802E-4]:2.153202945903E0,(19[&rate=5.964440272884674E-4]:1.204374287044E1,18[&rate=6.204195038933246E-4]:1.204374287044E1)[&rate=4.614600807562417E-4]:5.543318687181E1)[&rate=5.391373400762985E-4]:2.548028465356E0,((10[&rate=6.327134971755614E-4]:2.337563359002E1,31[&rate=4.614600807562417E-4]:2.337563359002E1)[&rate=5.279752491228346E-4]:4.655908370695E1,23[&rate=3.6598208577750673E-4]:6.993471729697E1)[&rate=9.067479597193599E-4]:9.024091063412E-2)[&rate=7.898574768707827E-4]:4.40571436825E0,(25[&rate=7.732425707085323E-4]:7.309744588032E1,(12[&rate=9.551504293079359E-4]:7.208774547491E1,((((30[&rate=6.710968886686014E-4]:5.061699057169E1,26[&rate=7.898574768707827E-4]:5.061699057169E1)[&rate=5.617048052860102E-4]:1.040751738649E1,32[&rate=3.523255829059693E-4]:6.102450795818E1)[&rate=8.251767367575257E-4]:7.884278767669E0,((((4[&rate=4.389047345182469E-4]:1.926455715636E0,2[&rate=4.038389541781942E-4]:1.926455715636E0)[&rate=6.710968886686014E-4]:2.120841400077E-1,3[&rate=7.898574768707827E-4]:2.138539855643E0)[&rate=8.440429891114695E-4]:7.111541026008E0,5[&rate=2.86688685273389E-4]:9.250080881652E0)[&rate=5.168691198817464E-4]:2.126787155534E0,((7[&rate=2.3626765117008632E-4]:6.745897304939E0,6[&rate=9.067479597193599E-4]:6.745897304939E0)[&rate=6.204195038933246E-4]:5.80680016704E-1,1[&rate=5.168691198817464E-4]:7.326577321643E0)[&rate=9.551504293079359E-4]:4.050290715542E0)[&rate=6.327134971755614E-4]:5.753191868866E1)[&rate=4.038389541781942E-4]:1.863486639608E0,(16[&rate=2.6453504132116143E-4]:3.137660082686E1,((22[&rate=6.710968886686014E-4]:2.596072626196E0,21[&rate=2.86688685273389E-4]:2.596072626196E0)[&rate=6.327134971755614E-4]:3.274572047136E0,20[&rate=5.057994878985228E-4]:5.870644673332E0)[&rate=0.0017279256676925368]:2.550595615352E1)[&rate=9.819658954987344E-4]:3.93956725386E1)[&rate=0.001543284915538183]:1.315472109451E0)[&rate=5.279752491228346E-4]:1.00970040541E0)[&rate=4.389047345182469E-4]:1.333226695538E0)[&rate=5.964440272884674E-4]:7.322957775129E0,(17[&rate=7.572336556107255E-4]:7.116957503136E1,(27[&rate=2.3626765117008632E-4]:2.746220679016E1,28[&rate=0.0010424528456968011]:2.746220679016E1)[&rate=6.710968886686014E-4]:4.37073682412E1)[&rate=3.6598208577750673E-4]:1.058405531963E1)[&rate=0.0013359547422368326]:4.447996548271E1); +tree STATE_630000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55125.231652800576,EEF_ucld_branchRates=-266.168517335019,lnP=-55125.231652800576,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.341258232041607E-4]:1.078026692096E1,9[&rate=6.936584378286078E-4]:1.078026692096E1)[&rate=8.75567611520907E-4]:4.783356539531E0,15[&rate=6.335500076847579E-4]:1.556362346049E1)[&rate=6.834128449464062E-4]:9.140523613584E1,(14[&rate=0.0015056335179426993]:3.957107188494E1,24[&rate=0.0010272245306107164]:3.957107188494E1)[&rate=0.0012393097183678837]:6.73977877114E1)[&rate=8.46449371552259E-4]:1.264671645973E1,((((((33[&rate=0.0010272245306107164]:5.977774987639E1,13[&rate=5.943309257868853E-4]:5.977774987639E1)[&rate=9.614473828927008E-4]:7.024606570969E0,(11[&rate=9.243515305050412E-4]:1.217787173477E1,29[&rate=7.361158666337805E-4]:1.217787173477E1)[&rate=7.361158666337805E-4]:5.462448471259E1)[&rate=2.83896066825626E-4]:1.643412839854E0,(19[&rate=7.25243161751436E-4]:1.490070512705E1,18[&rate=0.0010272245306107164]:1.490070512705E1)[&rate=4.897381474401612E-4]:5.354506416016E1)[&rate=8.065415824504377E-4]:2.7144124108E0,((10[&rate=7.361158666337805E-4]:1.927319091964E1,31[&rate=7.25243161751436E-4]:1.927319091964E1)[&rate=4.652747427866349E-4]:5.105014911743E1,23[&rate=5.544743487597746E-4]:7.032334003707E1)[&rate=6.139429804933677E-4]:8.368416609371E-1)[&rate=6.632429695818723E-4]:1.27826995239E0,(25[&rate=7.361158666337805E-4]:7.163357259705E1,(12[&rate=9.81801228283238E-4]:7.077927313034E1,((((30[&rate=6.632429695818723E-4]:4.661412431703E1,26[&rate=5.232434427277701E-4]:4.661412431703E1)[&rate=8.75567611520907E-4]:1.144425800709E1,32[&rate=4.5207807259658783E-4]:5.805838232412E1)[&rate=6.041464145620245E-4]:9.131155029833E0,((((4[&rate=5.943309257868853E-4]:1.85568007529E0,3[&rate=0.0015056335179426993]:1.85568007529E0)[&rate=9.243515305050412E-4]:2.323258390845E-1,2[&rate=6.936584378286078E-4]:2.088005914374E0)[&rate=8.326972179270191E-4]:6.643461802403E0,5[&rate=5.338441954849812E-4]:8.731467716777E0)[&rate=2.83896066825626E-4]:2.270385657534E0,((7[&rate=3.6395194806520485E-4]:6.107754268906E0,6[&rate=0.0010529309094995567]:6.107754268906E0)[&rate=6.73279812138648E-4]:1.366458678165E0,1[&rate=5.01249169856016E-4]:7.474212947071E0)[&rate=9.614473828927008E-4]:3.52764042724E0)[&rate=5.544743487597746E-4]:5.618768397964E1)[&rate=8.46449371552259E-4]:2.044400810835E0,(16[&rate=4.652747427866349E-4]:3.032377299825E1,((22[&rate=6.139429804933677E-4]:1.679797496544E0,21[&rate=8.910648793634818E-4]:1.679797496544E0)[&rate=7.040334785194983E-4]:4.190080048256E0,20[&rate=6.237385022331384E-4]:5.8698775448E0)[&rate=0.001772025390317845]:2.445389545345E1)[&rate=6.433939230102091E-4]:3.891016516653E1)[&rate=8.46449371552259E-4]:1.545334965553E0)[&rate=8.065415824504377E-4]:8.542994667133E-1)[&rate=3.867859600998175E-4]:8.048790533491E-1)[&rate=2.83896066825626E-4]:2.205949026484E0,(17[&rate=8.194100341730611E-4]:6.522854169963E1,(27[&rate=4.777816227899359E-4]:2.638670066015E1,28[&rate=5.943309257868853E-4]:2.638670066015E1)[&rate=8.326972179270191E-4]:3.884184103948E1)[&rate=4.652747427866349E-4]:9.415858977251E0)[&rate=9.243515305050412E-4]:4.497117537918E1); +tree STATE_640000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.84650663127,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.84650663127,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.297908801548182E-4]:1.154099858997E1,9[&rate=6.386442842349231E-4]:1.154099858997E1)[&rate=2.862110085253504E-4]:4.091512768611E0,15[&rate=9.457638681249037E-4]:1.563251135858E1)[&rate=8.574094344227503E-4]:8.960221699677E1,(14[&rate=0.001569920777061997]:3.717409823588E1,24[&rate=9.457638681249037E-4]:3.717409823588E1)[&rate=8.152716712551168E-4]:6.806063011947E1)[&rate=5.240537261061581E-4]:2.08146206292E1,((((((33[&rate=7.781050309515398E-4]:6.224879450103E1,13[&rate=4.8546634491867076E-4]:6.224879450103E1)[&rate=5.687402281010994E-4]:8.326727875796E0,(11[&rate=3.6054409432284204E-4]:1.283867992571E1,29[&rate=6.843349989053255E-4]:1.283867992571E1)[&rate=6.475730946763436E-4]:5.773684245112E1)[&rate=6.475730946763436E-4]:1.72144721602E0,(19[&rate=2.862110085253504E-4]:1.293616117955E1,18[&rate=8.024137048049879E-4]:1.293616117955E1)[&rate=5.861634640480331E-4]:5.93608084133E1)[&rate=6.035430124981981E-4]:5.539096777848E-1,((10[&rate=8.729205898997599E-4]:2.052202735412E1,31[&rate=6.843349989053255E-4]:2.052202735412E1)[&rate=3.3300031999735827E-4]:5.170343006566E1,23[&rate=3.8152263293738905E-4]:7.222545741978E1)[&rate=6.657144677825184E-4]:6.254218508537E-1)[&rate=7.900418973492115E-4]:2.337646095698E0,(25[&rate=7.338922164330571E-4]:7.369477580938E1,(12[&rate=8.729205898997599E-4]:7.173678772441E1,((((30[&rate=6.938654687813889E-4]:4.898180737303E1,26[&rate=5.687402281010994E-4]:4.898180737303E1)[&rate=9.068320983873778E-4]:1.060567997777E1,32[&rate=4.64306018826976E-4]:5.95874873508E1)[&rate=4.410450433911478E-4]:1.007508182503E1,(16[&rate=5.422252554014958E-4]:3.506689842539E1,((22[&rate=8.893461235203613E-4]:2.048572332449E0,21[&rate=7.665585394981147E-4]:2.048572332449E0)[&rate=7.900418973492115E-4]:4.415685720103E0,20[&rate=0.001126017967424592]:6.464258052553E0)[&rate=0.0013493338652388698]:2.860264037283E1)[&rate=9.457638681249037E-4]:3.459567075044E1)[&rate=5.332051297030672E-4]:1.053972450169E0,((((4[&rate=8.574094344227503E-4]:1.875073972964E0,3[&rate=6.657144677825184E-4]:1.875073972964E0)[&rate=5.948509732278965E-4]:4.657219546453E-1,2[&rate=3.3300031999735827E-4]:2.340795927609E0)[&rate=4.64306018826976E-4]:6.618756895973E0,5[&rate=9.457638681249037E-4]:8.959552823582E0)[&rate=6.843349989053255E-4]:2.220939676724E0,((7[&rate=4.64306018826976E-4]:7.22594253471E0,6[&rate=6.209988423414927E-4]:7.22594253471E0)[&rate=8.152716712551168E-4]:9.439076230323E-1,1[&rate=6.56591595675466E-4]:8.169850157742E0)[&rate=4.7509597696797893E-4]:3.010642342564E0)[&rate=4.8546634491867076E-4]:5.953604912569E1)[&rate=7.781050309515398E-4]:1.020246098418E0)[&rate=5.774652405965486E-4]:1.957988084963E0)[&rate=5.59971254500217E-4]:1.493749556956E0)[&rate=7.55363324816603E-4]:3.282903767356E0,(17[&rate=6.035430124981981E-4]:7.114302498067E1,(27[&rate=4.5299898433674284E-4]:2.765236879157E1,28[&rate=8.024137048049879E-4]:2.765236879157E1)[&rate=6.843349989053255E-4]:4.34906561891E1)[&rate=6.938654687813889E-4]:7.328404153022E0)[&rate=0.001569920777061997]:4.757791985086E1); +tree STATE_650000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55169.12236083816,EEF_ucld_branchRates=-266.168517335019,lnP=-55169.12236083816,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.5343334556357407E-4]:8.158955303552E0,9[&rate=5.116078669821801E-4]:8.158955303552E0)[&rate=3.001294835245537E-4]:7.011885611094E0,15[&rate=4.645028079971962E-4]:1.517084091465E1)[&rate=7.38549890715235E-4]:9.297440237023E1,(14[&rate=0.0014432627147440836]:4.004009762133E1,24[&rate=8.646993692585088E-4]:4.004009762133E1)[&rate=0.001143034979617999]:6.810514566354E1)[&rate=5.60218014292051E-4]:1.988004558654E1,((((((11[&rate=5.805299447205512E-4]:1.41822167886E1,29[&rate=5.02129966845865E-4]:1.41822167886E1)[&rate=5.90940228326011E-4]:5.590580628369E1,(33[&rate=5.805299447205512E-4]:6.038322655383E1,13[&rate=5.60218014292051E-4]:6.038322655383E1)[&rate=3.8641927869777963E-4]:9.704796518459E0)[&rate=3.7581176647797645E-4]:2.172428680981E0,(19[&rate=9.128466128091633E-4]:1.222856887584E1,18[&rate=7.86682946423221E-4]:1.222856887584E1)[&rate=3.4145709519656925E-4]:6.003188287743E1)[&rate=7.239041374155958E-4]:3.452964469511E0,((10[&rate=5.90940228326011E-4]:2.448073881832E1,31[&rate=9.128466128091633E-4]:2.448073881832E1)[&rate=2.633374880813624E-4]:4.946222166036E1,23[&rate=4.1671541795041604E-4]:7.394296047868E1)[&rate=2.3769650152992381E-4]:1.770455744099E0)[&rate=1.9554967203313237E-4]:2.126984746976E0,(25[&rate=6.015453985631121E-4]:7.745607777764E1,((((30[&rate=4.7390045221733283E-4]:4.902605817159E1,26[&rate=8.044359271544134E-4]:4.902605817159E1)[&rate=5.502808564476092E-4]:1.485519275112E1,32[&rate=5.211463404757726E-4]:6.388125092271E1)[&rate=8.432665159825392E-4]:9.132175959925E0,((((4[&rate=6.123660598754095E-4]:1.725021363397E0,3[&rate=4.264584493345213E-4]:1.725021363397E0)[&rate=6.83206581431845E-4]:4.729484448681E-1,2[&rate=5.90940228326011E-4]:2.197969808265E0)[&rate=7.538404745171573E-4]:7.440645874671E0,5[&rate=5.116078669821801E-4]:9.638615682936E0)[&rate=7.098359574575912E-4]:1.873934618758E0,((7[&rate=4.7390045221733283E-4]:7.265596401757E0,6[&rate=8.044359271544134E-4]:7.265596401757E0)[&rate=6.123660598754095E-4]:1.057172510036E0,1[&rate=4.8329264596848055E-4]:8.322768911793E0)[&rate=3.648459082857349E-4]:3.189781389901E0)[&rate=3.648459082857349E-4]:6.150087658094E1)[&rate=4.926969229423044E-4]:5.675626069142E-1,(12[&rate=6.705496928865602E-4]:7.346487184891E1,(16[&rate=3.9673730579614777E-4]:3.665298621354E1,((22[&rate=6.582767093213377E-4]:2.90435709736E0,21[&rate=3.8641927869777963E-4]:2.90435709736E0)[&rate=8.232440733068071E-4]:4.767397231649E0,20[&rate=9.128466128091633E-4]:7.67175432901E0)[&rate=8.646993692585088E-4]:2.898123188453E1)[&rate=7.098359574575912E-4]:3.681188563537E1)[&rate=7.38549890715235E-4]:1.161176406405E-1)[&rate=6.123660598754095E-4]:3.875088288094E0)[&rate=2.3769650152992381E-4]:3.843231921103E-1)[&rate=4.4561491054121084E-4]:2.316876938251E0,(17[&rate=9.128466128091633E-4]:6.671508981177E1,(27[&rate=7.098359574575912E-4]:2.489145295021E1,28[&rate=0.0014432627147440836]:2.489145295021E1)[&rate=5.502808564476092E-4]:4.182363686156E1)[&rate=1.9554967203313237E-4]:1.344218809623E1)[&rate=0.0017543291917417466]:4.786801096341E1); +tree STATE_660000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55134.47414417466,EEF_ucld_branchRates=-266.168517335019,lnP=-55134.47414417466,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.71237411192769E-4]:1.094427685358E1,9[&rate=3.657014084194037E-4]:1.094427685358E1)[&rate=7.401970147563408E-4]:4.551875452281E0,15[&rate=3.9838791101967896E-4]:1.549615230586E1)[&rate=7.593703000867164E-4]:9.728622694055E1,(14[&rate=9.952649967461013E-4]:3.907127516225E1,24[&rate=0.0013262627553173732]:3.907127516225E1)[&rate=9.952649967461013E-4]:7.371110408416E1)[&rate=7.218806463463418E-4]:9.018773516888E0,((((((33[&rate=6.71266307628606E-4]:6.276102159776E1,13[&rate=3.657014084194037E-4]:6.276102159776E1)[&rate=7.401970147563408E-4]:8.481825636748E0,(11[&rate=6.40494643598794E-4]:1.688726458979E1,29[&rate=3.0861640056765706E-4]:1.688726458979E1)[&rate=5.71237411192769E-4]:5.435558264472E1)[&rate=5.33596533251579E-4]:2.726208929287E0,(19[&rate=7.401970147563408E-4]:1.406105642491E1,18[&rate=3.321034194592191E-4]:1.406105642491E1)[&rate=4.8654834017796127E-4]:5.990799973888E1)[&rate=2.0353236697665761E-4]:3.185727249702E0,((10[&rate=4.528962439468675E-4]:2.17081169544E1,31[&rate=7.218806463463418E-4]:2.17081169544E1)[&rate=2.963447068533396E-4]:5.441610295572E1,23[&rate=5.584205606487737E-4]:7.612421991012E1)[&rate=8.231184055365022E-4]:1.030563503376E0)[&rate=1.3918894509147472E-4]:2.369944214028E0,(25[&rate=7.043350870872827E-4]:7.855518330875E1,(12[&rate=9.287377469162034E-4]:7.623166801973E1,((16[&rate=4.752073980127561E-4]:3.739530818991E1,((22[&rate=4.4188844379791794E-4]:2.882316744604E0,21[&rate=3.0861640056765706E-4]:2.882316744604E0)[&rate=2.4051849012791309E-4]:3.403682898258E0,20[&rate=5.215418333157876E-4]:6.285999642863E0)[&rate=0.001033615565585889]:3.110930854705E1)[&rate=8.722709513220864E-4]:3.738467481439E1,(((((4[&rate=5.843586107697706E-4]:2.160498202205E0,3[&rate=5.978125710037607E-4]:2.160498202205E0)[&rate=3.4346694368889646E-4]:3.816216020887E-1,2[&rate=8.722709513220864E-4]:2.542119804294E0)[&rate=4.309537988704615E-4]:6.601301187426E0,5[&rate=2.963447068533396E-4]:9.14342099172E0)[&rate=2.701868020007974E-4]:1.682539446435E0,((7[&rate=5.978125710037607E-4]:6.407293824102E0,6[&rate=8.469082125114964E-4]:6.407293824102E0)[&rate=2.0353236697665761E-4]:1.407442499557E0,1[&rate=5.33596533251579E-4]:7.814736323659E0)[&rate=5.584205606487737E-4]:3.011224114496E0)[&rate=3.321034194592191E-4]:6.127876432992E1,((30[&rate=7.795003287041114E-4]:5.253731772045E1,26[&rate=4.63996290543021E-4]:5.253731772045E1)[&rate=4.8654834017796127E-4]:1.288650713127E1,32[&rate=5.096959227996868E-4]:6.542382485171E1)[&rate=1.3918894509147472E-4]:6.680899916363E0)[&rate=4.200726778297663E-4]:2.675258236227E0)[&rate=0.001567272666063988]:1.451685015427E0)[&rate=9.952649967461013E-4]:2.323515289018E0)[&rate=9.287377469162034E-4]:9.695443187742E-1)[&rate=1.7857901969264346E-4]:3.051845902278E0,(17[&rate=8.994479096764004E-4]:7.117998367941E1,(27[&rate=4.309537988704615E-4]:2.897804536515E1,28[&rate=0.001567272666063988]:2.897804536515E1)[&rate=5.843586107697706E-4]:4.220193831426E1)[&rate=5.978125710037607E-4]:1.139658985039E1)[&rate=0.0017862720714384192]:3.92245792335E1); +tree STATE_670000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.85792063989,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.85792063989,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.520635108078546E-4]:7.543271595793E0,9[&rate=5.324229098026514E-4]:7.543271595793E0)[&rate=2.259316379158654E-4]:8.427154604391E0,15[&rate=7.807212812096443E-4]:1.597042620018E1)[&rate=9.725546641934992E-4]:9.786999399343E1,(14[&rate=0.0013622149073197443]:3.90087556056E1,24[&rate=0.0010002263651157058]:3.90087556056E1)[&rate=8.818717097618766E-4]:7.483166458801E1)[&rate=8.11275857748917E-4]:1.483607766548E1,((((((33[&rate=7.524749098426034E-4]:6.214211842794E1,13[&rate=4.0792450226278935E-4]:6.214211842794E1)[&rate=6.228223407578232E-4]:9.886269165998E0,(11[&rate=4.0792450226278935E-4]:1.868270891334E1,29[&rate=6.662684744027103E-4]:1.868270891334E1)[&rate=8.275939126450066E-4]:5.334567868061E1)[&rate=6.662684744027103E-4]:7.522939716015E-1,(19[&rate=8.11275857748917E-4]:1.229309509018E1,18[&rate=8.627725416836426E-4]:1.229309509018E1)[&rate=3.9582567425057094E-4]:6.048758647537E1)[&rate=9.238881935113331E-4]:2.728070626926E0,((10[&rate=2.259316379158654E-4]:2.090609419652E1,31[&rate=4.930157603937822E-4]:2.090609419652E1)[&rate=2.9952457570938355E-4]:5.399611458794E1,23[&rate=4.6267142672046506E-4]:7.490220878446E1)[&rate=5.718515155647227E-4]:6.065434080099E-1)[&rate=4.7291356925166603E-4]:2.086571809043E0,(25[&rate=6.123910372702507E-4]:7.586476942151E1,((12[&rate=9.238881935113331E-4]:6.999804113558E1,((16[&rate=5.324229098026514E-4]:3.686536603907E1,((22[&rate=5.919174836517197E-4]:3.024686241844E0,21[&rate=6.441625344160192E-4]:3.024686241844E0)[&rate=5.919174836517197E-4]:4.339281485075E0,20[&rate=3.3903175386156703E-4]:7.363967726919E0)[&rate=0.0013622149073197443]:2.950139831215E1)[&rate=9.725546641934992E-4]:2.929900509661E1,((30[&rate=7.807212812096443E-4]:5.194846950857E1,26[&rate=7.260979768815303E-4]:5.194846950857E1)[&rate=9.725546641934992E-4]:9.5704507392E0,32[&rate=4.307412909875444E-4]:6.151892024777E1)[&rate=6.441625344160192E-4]:4.645450887907E0)[&rate=5.226152430580152E-4]:3.833669999907E0)[&rate=5.127916435008348E-4]:2.763839102462E0,((((4[&rate=4.522572015819319E-4]:2.23366047073E0,3[&rate=7.807212812096443E-4]:2.23366047073E0)[&rate=8.818717097618766E-4]:2.410682641266E-1,2[&rate=2.9952457570938355E-4]:2.474728734856E0)[&rate=8.627725416836426E-4]:6.490363303692E0,5[&rate=6.893137192413423E-4]:8.965092038548E0)[&rate=5.919174836517197E-4]:1.355500070588E0,((7[&rate=6.893137192413423E-4]:6.67887409269E0,6[&rate=7.663397547847432E-4]:6.67887409269E0)[&rate=3.3903175386156703E-4]:1.048225459168E0,1[&rate=6.55109515890978E-4]:7.727099551858E0)[&rate=6.334066642199869E-4]:2.593492557279E0)[&rate=6.441625344160192E-4]:6.244128812891E1)[&rate=4.0792450226278935E-4]:3.102889183467E0)[&rate=5.718515155647227E-4]:1.730554579998E0)[&rate=5.422331519668728E-4]:5.63892336702E0,(17[&rate=7.807212812096443E-4]:7.062304175994E1,(27[&rate=4.307412909875444E-4]:3.655569867441E1,28[&rate=5.718515155647227E-4]:3.655569867441E1)[&rate=0.0013622149073197443]:3.406734308553E1)[&rate=3.209432586320519E-4]:1.26112056086E1)[&rate=0.001501049095380693]:4.544225049056E1); +tree STATE_680000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.524234353135,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.524234353135,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.866498998405824E-4]:1.015529048147E1,9[&rate=6.215536206343159E-4]:1.015529048147E1)[&rate=7.215852057055438E-4]:5.681068259916E0,15[&rate=4.3904871216950646E-4]:1.583635874139E1)[&rate=8.288412224175205E-4]:8.724769201059E1,(14[&rate=0.0014292631066323972]:3.839144165314E1,24[&rate=0.0010563302560340757]:3.839144165314E1)[&rate=8.952960762083821E-4]:6.469260909883E1)[&rate=3.244891975349426E-4]:2.182907292989E1,((((((33[&rate=8.952960762083821E-4]:6.215090657832E1,13[&rate=3.244891975349426E-4]:6.215090657832E1)[&rate=9.140174426663497E-4]:7.952863993192E0,(11[&rate=8.288412224175205E-4]:1.667493574762E1,29[&rate=9.338188335658802E-4]:1.667493574762E1)[&rate=6.866498998405824E-4]:5.342883482389E1)[&rate=5.074087395799766E-4]:6.682256662614E-1,(19[&rate=7.097076593232368E-4]:1.261706616E1,18[&rate=9.338188335658802E-4]:1.261706616E1)[&rate=4.3904871216950646E-4]:5.815493007777E1)[&rate=5.180190675039886E-4]:3.807030329433E0,((10[&rate=6.534809543688705E-4]:2.352422494263E1,31[&rate=6.980702824751173E-4]:2.352422494263E1)[&rate=4.262979069660757E-4]:5.000478146722E1,23[&rate=6.320877214927883E-4]:7.352900640985E1)[&rate=2.9508130383477287E-4]:1.050020157352E0)[&rate=0.0010277155466883485]:1.837376472571E0,(25[&rate=7.720336705784117E-4]:7.56145630542E1,(((((4[&rate=9.773485274631724E-4]:1.872874099025E0,3[&rate=5.595528142105621E-4]:1.872874099025E0)[&rate=6.007256628975512E-4]:6.250865748699E-1,2[&rate=0.0013358271714617124]:2.497960673895E0)[&rate=6.111052047023954E-4]:6.20273999306E0,5[&rate=6.643749922902319E-4]:8.700700666955E0)[&rate=9.773485274631724E-4]:1.655641189835E0,((7[&rate=3.244891975349426E-4]:7.250701393724E0,6[&rate=0.0010277155466883485]:7.250701393724E0)[&rate=5.801053546679922E-4]:6.909342635087E-1,1[&rate=3.663287998448405E-4]:7.941635657233E0)[&rate=8.288412224175205E-4]:2.414706199557E0)[&rate=7.337279664951338E-4]:6.197168317222E1,((16[&rate=5.595528142105621E-4]:3.315157231532E1,((22[&rate=6.534809543688705E-4]:2.499576835461E0,21[&rate=7.855384955961385E-4]:2.499576835461E0)[&rate=4.262979069660757E-4]:4.669333350052E0,20[&rate=5.698297359159443E-4]:7.168910185513E0)[&rate=0.0014292631066323972]:2.598266212981E1)[&rate=6.111052047023954E-4]:3.701739088891E1,(((30[&rate=8.605805870598771E-4]:4.883865362571E1,26[&rate=6.111052047023954E-4]:4.883865362571E1)[&rate=5.698297359159443E-4]:1.326725487104E1,32[&rate=4.85703855258917E-4]:6.210590849675E1)[&rate=3.663287998448405E-4]:6.731659599246E0,12[&rate=9.140174426663497E-4]:6.8837568096E1)[&rate=4.5127315630468515E-4]:1.33139510823E0)[&rate=2.4622526851035884E-4]:2.159061824779E0)[&rate=8.288412224175205E-4]:3.286538025188E0)[&rate=4.6307348886610395E-4]:8.018399855796E-1)[&rate=6.320877214927883E-4]:5.079704346199E0,(17[&rate=8.605805870598771E-4]:7.441522440614E1,(27[&rate=4.7452922422796796E-4]:3.419303320423E1,28[&rate=7.097076593232368E-4]:3.419303320423E1)[&rate=6.866498998405824E-4]:4.022219120191E1)[&rate=0.0010277155466883485]:7.08088297984E0)[&rate=0.0015717039084154722]:4.341701629589E1); +tree STATE_690000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55145.296861861156,EEF_ucld_branchRates=-266.168517335019,lnP=-55145.296861861156,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.215839330559491E-4]:8.727486874423E0,9[&rate=6.007742076546003E-4]:8.727486874423E0)[&rate=3.6369825295196095E-4]:5.794685985251E0,15[&rate=4.729215451078965E-4]:1.452217285967E1)[&rate=6.65415317490201E-4]:8.596878965233E1,(14[&rate=0.0014477503938112415]:3.627989362714E1,24[&rate=0.0010652375511031767]:3.627989362714E1)[&rate=8.486957305791317E-4]:6.421106888487E1)[&rate=6.880593485390563E-4]:1.931151853158E1,((((((33[&rate=7.887129129372406E-4]:5.879127749069E1,13[&rate=4.2418320703312243E-4]:5.879127749069E1)[&rate=7.115106053312416E-4]:8.496333980606E0,(11[&rate=0.0010359622853050353]:1.352426304648E1,29[&rate=6.996732018150066E-4]:1.352426304648E1)[&rate=6.113088661721687E-4]:5.376334842482E1)[&rate=2.920302825247366E-4]:1.51422809349E0,(19[&rate=8.825057608575499E-4]:1.650421641777E1,18[&rate=7.359527748179355E-4]:1.650421641777E1)[&rate=4.494114045744743E-4]:5.229762314702E1)[&rate=7.115106053312416E-4]:3.729534402329E0,((10[&rate=8.825057608575499E-4]:2.05952897697E1,31[&rate=5.061890719743319E-4]:2.05952897697E1)[&rate=3.215839330559491E-4]:5.111433133326E1,23[&rate=4.370605084687103E-4]:7.170962110296E1)[&rate=3.215839330559491E-4]:8.217528641558E-1)[&rate=0.0010091793443560738]:1.895877043872E0,(25[&rate=8.328488314939918E-4]:7.294086174478E1,((((30[&rate=4.494114045744743E-4]:5.276342177712E1,26[&rate=4.952990256659112E-4]:5.276342177712E1)[&rate=6.996732018150066E-4]:1.053671482694E1,32[&rate=3.807440737582496E-4]:6.330013660406E1)[&rate=5.590129302216315E-4]:6.487791310091E0,((16[&rate=4.6133848094382675E-4]:3.618405412815E1,((22[&rate=6.434166919326495E-4]:2.473250895377E0,21[&rate=5.694326117037593E-4]:2.473250895377E0)[&rate=2.4303039188013634E-4]:3.011091804869E0,20[&rate=7.616007087225763E-4]:5.484342700246E0)[&rate=0.0015942636554675863]:3.069971142791E1)[&rate=8.652205888128571E-4]:3.061007375097E1,((((4[&rate=0.0013517586657489083]:1.414051227246E0,3[&rate=9.197615900896547E-4]:1.414051227246E0)[&rate=6.65415317490201E-4]:3.925802539332E-1,2[&rate=6.113088661721687E-4]:1.806631481179E0)[&rate=9.61482552004752E-4]:5.763210068547E0,5[&rate=5.590129302216315E-4]:7.569841549727E0)[&rate=4.1064346084679744E-4]:3.625816056606E0,((7[&rate=9.844619483743294E-4]:6.831971690584E0,6[&rate=8.328488314939918E-4]:6.831971690584E0)[&rate=9.197615900896547E-4]:1.574109867738E0,1[&rate=5.275583303532325E-4]:8.406081558322E0)[&rate=6.113088661721687E-4]:2.789576048011E0)[&rate=5.590129302216315E-4]:5.559847027279E1)[&rate=9.197615900896547E-4]:2.993800035034E0)[&rate=9.006478988555155E-4]:9.423049640009E-1,12[&rate=9.844619483743294E-4]:7.073023287815E1)[&rate=7.115106053312416E-4]:2.210628866624E0)[&rate=6.766469588904813E-4]:1.486389266211E0)[&rate=5.590129302216315E-4]:5.09927819254E0,(17[&rate=0.0010359622853050353]:6.937534640125E1,(27[&rate=6.65415317490201E-4]:3.204338237984E1,28[&rate=8.328488314939918E-4]:3.204338237984E1)[&rate=6.32612963298215E-4]:3.733196402141E1)[&rate=6.007742076546003E-4]:1.015118280228E1)[&rate=0.0015942636554675863]:4.027595184005E1); +tree STATE_700000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55144.19474204878,EEF_ucld_branchRates=-266.168517335019,lnP=-55144.19474204878,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.3434240303322354E-4]:9.620568570288E0,9[&rate=8.873219483806976E-4]:9.620568570288E0)[&rate=5.92434354895532E-4]:5.077474614746E0,15[&rate=7.721828458957581E-4]:1.469804318503E1)[&rate=9.210784524474463E-4]:8.947966993992E1,(14[&rate=0.0012166309694360978]:3.948164249207E1,24[&rate=9.602897536883608E-4]:3.948164249207E1)[&rate=8.873219483806976E-4]:6.469607063288E1)[&rate=5.036601767915853E-4]:2.44419372561E1,((((((33[&rate=7.616283232992528E-4]:5.882758233744E1,13[&rate=3.81307518756999E-4]:5.882758233744E1)[&rate=7.94290146950141E-4]:1.187712991081E1,(11[&rate=5.585460973463334E-4]:1.343342707368E1,29[&rate=6.855165207651892E-4]:1.343342707368E1)[&rate=8.059198746580889E-4]:5.727128517457E1)[&rate=5.133844276169566E-4]:1.141102661183E0,(19[&rate=6.341149692069892E-4]:1.609860126394E1,18[&rate=5.756286087316243E-4]:1.609860126394E1)[&rate=4.935885444441146E-4]:5.574721364549E1)[&rate=3.0723789612829426E-4]:2.802227660436E0,((10[&rate=6.341149692069892E-4]:2.096699292755E1,31[&rate=7.034653448133004E-4]:2.096699292755E1)[&rate=5.840567681468686E-4]:5.342159084022E1,23[&rate=4.830943310774425E-4]:7.438858376777E1)[&rate=8.305680379876458E-4]:2.594588020934E-1)[&rate=6.174255544912477E-4]:3.272768979905E0,(25[&rate=7.034653448133004E-4]:7.789394877563E1,((((((3[&rate=7.616283232992528E-4]:1.258877681322E0,4[&rate=6.944225892656022E-4]:1.258877681322E0)[&rate=6.174255544912477E-4]:7.851693622045E-1,2[&rate=4.935885444441146E-4]:2.044047043527E0)[&rate=6.944225892656022E-4]:8.20298540168E0,5[&rate=5.228209862780989E-4]:1.024703244521E1)[&rate=6.680521967023232E-4]:2.10718701555E0,((7[&rate=5.840567681468686E-4]:7.643243715345E0,6[&rate=6.425094712853939E-4]:7.643243715345E0)[&rate=4.720803041679949E-4]:5.244173456621E-1,1[&rate=5.320183078131214E-4]:8.167661061007E0)[&rate=8.719822784022603E-4]:4.18655839975E0)[&rate=5.840567681468686E-4]:6.09673083151E1,12[&rate=7.94290146950141E-4]:7.332152777585E1)[&rate=8.179943454625525E-4]:1.771921839326E0,((16[&rate=6.425094712853939E-4]:3.476282069415E1,((22[&rate=0.0011064763052693852]:2.28482309579E0,21[&rate=9.82694113909724E-4]:2.28482309579E0)[&rate=6.680521967023232E-4]:3.519913156019E0,20[&rate=7.220291014084335E-4]:5.804736251809E0)[&rate=0.0013105244203032464]:2.895808444234E1)[&rate=8.574794315301806E-4]:3.916433756354E1,((30[&rate=4.192683873927657E-4]:5.290110743992E1,26[&rate=6.855165207651892E-4]:5.290110743992E1)[&rate=8.574794315301806E-4]:1.364308024676E1,32[&rate=3.81307518756999E-4]:6.654418768668E1)[&rate=6.509549257154535E-4]:7.382970571007E0)[&rate=6.944225892656022E-4]:1.166291357491E0)[&rate=8.437046508576388E-4]:2.800499160448E0)[&rate=6.680521967023232E-4]:2.686277414348E-2)[&rate=3.5398847134130855E-4]:4.88529137473E0,(17[&rate=9.398729800770852E-4]:7.613020311565E1,(27[&rate=3.0723789612829426E-4]:3.354969664247E1,28[&rate=9.398729800770852E-4]:3.354969664247E1)[&rate=8.305680379876458E-4]:4.258050647319E1)[&rate=4.479243631602747E-4]:6.675899808849E0)[&rate=0.0015099391775709992]:4.581354745655E1); +tree STATE_710000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55152.16259121707,EEF_ucld_branchRates=-266.168517335019,lnP=-55152.16259121707,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.1047061865411586E-4]:9.747723287791E0,9[&rate=5.965791927348159E-4]:9.747723287791E0)[&rate=2.561835720264566E-4]:8.370232443076E0,15[&rate=5.317376178904604E-4]:1.811795573087E1)[&rate=8.7788502267932E-4]:9.453109553354E1,(14[&rate=0.0014752347638372402]:3.755417300575E1,24[&rate=0.0016392466903379658]:3.755417300575E1)[&rate=0.001054746914774242]:7.509487825866E1)[&rate=4.4536487412720173E-4]:1.179444475938E1,(((((((33[&rate=6.304878663443682E-4]:6.158877488845E1,13[&rate=2.846652498013254E-4]:6.158877488845E1)[&rate=2.846652498013254E-4]:9.130158948899E0,(11[&rate=6.421347020441654E-4]:1.414676085813E1,29[&rate=8.226605510440854E-4]:1.414676085813E1)[&rate=7.448218155113836E-4]:5.657217297921E1)[&rate=3.424004405214619E-4]:3.087365940347E0,(19[&rate=3.853400599435204E-4]:1.942434366902E1,18[&rate=5.211065892804474E-4]:1.942434366902E1)[&rate=3.576819164273075E-4]:5.438195610868E1)[&rate=4.998234221834986E-4]:3.315074573556E0,((10[&rate=7.89765588203763E-4]:2.273603842399E1,31[&rate=6.539875064008666E-4]:2.273603842399E1)[&rate=3.256727572334932E-4]:5.382998291577E1,23[&rate=5.104755199825095E-4]:7.656602133977E1)[&rate=5.965791927348159E-4]:5.553530114843E-1)[&rate=8.982786789121937E-4]:3.051756188287E0,25[&rate=6.6606844473983E-4]:8.017313053954E1)[&rate=7.742571869888298E-4]:4.633993391844E-1,(12[&rate=9.429303857568813E-4]:7.738463362036E1,((16[&rate=3.98150557902521E-4]:3.490027835298E1,((22[&rate=8.226605510440854E-4]:2.812386927172E0,21[&rate=6.784012434221982E-4]:2.812386927172E0)[&rate=4.340090785879061E-4]:2.747541406389E0,20[&rate=7.039267840338464E-4]:5.559928333561E0)[&rate=9.941998788494163E-4]:2.934035001942E1)[&rate=0.0010230892382511732]:4.019266117058E1,(((((3[&rate=5.965791927348159E-4]:1.572798064772E0,4[&rate=6.539875064008666E-4]:1.572798064772E0)[&rate=0.001289478666040962]:4.012887009955E-1,2[&rate=2.561835720264566E-4]:1.974086765767E0)[&rate=0.001054746914774242]:8.129624981412E0,5[&rate=7.592932405040965E-4]:1.010371174718E1)[&rate=8.226605510440854E-4]:1.769157844494E0,((7[&rate=4.565155507732413E-4]:9.411714199147E0,6[&rate=6.910114512848982E-4]:9.411714199147E0)[&rate=8.585653883768499E-4]:1.073440912993E0,1[&rate=5.638235398287805E-4]:1.048515511214E1)[&rate=5.746440153443983E-4]:1.387714479534E0)[&rate=2.561835720264566E-4]:6.0026516891E1,((30[&rate=5.965791927348159E-4]:5.258865345385E1,26[&rate=5.746440153443983E-4]:5.258865345385E1)[&rate=8.982786789121937E-4]:1.119713119561E1,32[&rate=4.1047061865411586E-4]:6.378578464946E1)[&rate=8.982786789121937E-4]:8.113601833215E0)[&rate=6.190260950066914E-4]:3.193553040891E0)[&rate=8.585653883768499E-4]:2.291694096798E0)[&rate=6.6606844473983E-4]:3.25189625836E0)[&rate=9.19898723826655E-4]:3.107668872288E0,(17[&rate=6.6606844473983E-4]:7.394114711231E1,(27[&rate=5.104755199825095E-4]:3.227335327091E1,28[&rate=0.0010898116137338]:3.227335327091E1)[&rate=5.104755199825095E-4]:4.16677938414E1)[&rate=4.22398032324578E-4]:9.803051638698E0)[&rate=0.0020038908894589374]:4.069929727278E1); +tree STATE_720000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55128.437647093546,EEF_ucld_branchRates=-266.168517335019,lnP=-55128.437647093546,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.4714284115444344E-4]:7.698414580996E0,9[&rate=3.590768975293094E-4]:7.698414580996E0)[&rate=5.027868799674934E-4]:8.014775917607E0,15[&rate=2.1652890150743452E-4]:1.57131904986E1)[&rate=7.542709112299139E-4]:9.419732739995E1,(14[&rate=0.0012481677256810794]:3.871593463702E1,24[&rate=7.362213210333269E-4]:3.871593463702E1)[&rate=7.362213210333269E-4]:7.119458326153E1)[&rate=3.3584894590697734E-4]:1.613959692283E1,(((25[&rate=8.137925538909451E-4]:7.58412168689E1,(12[&rate=6.001833167610127E-4]:7.415114769211E1,((16[&rate=2.1652890150743452E-4]:3.777673315689E1,((22[&rate=8.358035248326413E-4]:2.757134007461E0,21[&rate=4.362248970592852E-4]:2.757134007461E0)[&rate=8.591430859362285E-4]:4.410566543483E0,20[&rate=5.027868799674934E-4]:7.167700550944E0)[&rate=0.0015576065638328409]:3.060903260595E1)[&rate=8.591430859362285E-4]:3.477805301168E1,(((30[&rate=9.10611844355988E-4]:5.104806591514E1,26[&rate=8.137925538909451E-4]:5.104806591514E1)[&rate=5.619397088003217E-4]:1.272330067344E1,32[&rate=4.2533071986695627E-4]:6.377136658858E1)[&rate=6.001833167610127E-4]:8.187372861796E0,((((3[&rate=3.3584894590697734E-4]:1.494364366211E0,4[&rate=3.1134171404063394E-4]:1.494364366211E0)[&rate=5.258911151318315E-4]:1.665212743374E-1,2[&rate=0.0010416031154881508]:1.660885640548E0)[&rate=4.362248970592852E-4]:9.918953221125E0,5[&rate=3.3584894590697734E-4]:1.157983886167E1)[&rate=6.272383871502857E-4]:3.068712715475E0,((7[&rate=8.840017485763845E-4]:9.492237504676E0,6[&rate=5.871513760611351E-4]:9.492237504676E0)[&rate=0.0010416031154881508]:1.403036134274E0,1[&rate=1.9081278232996633E-4]:1.089527363895E1)[&rate=2.5445568214790414E-4]:3.753277938199E0)[&rate=5.258911151318315E-4]:5.731018787323E1)[&rate=4.5810523087557733E-4]:5.960467181989E-1)[&rate=0.0015576065638328409]:1.596361523538E0)[&rate=1.9081278232996633E-4]:1.690069176791E0)[&rate=6.413244653561944E-4]:1.321673756194E0,((((33[&rate=7.022855049335241E-4]:6.040343456338E1,13[&rate=4.362248970592852E-4]:6.040343456338E1)[&rate=6.001833167610127E-4]:9.849334013994E0,(11[&rate=6.862634401957692E-4]:1.398861604052E1,29[&rate=7.731489892509699E-4]:1.398861604052E1)[&rate=5.619397088003217E-4]:5.626415253685E1)[&rate=6.135356247433027E-4]:7.786426852897E-1,(19[&rate=3.815228180155034E-4]:1.864630618967E1,18[&rate=5.377012076378003E-4]:1.864630618967E1)[&rate=4.91453891454983E-4]:5.238510507299E1)[&rate=3.4758676312168806E-4]:2.434301491946E0,((10[&rate=8.591430859362285E-4]:1.982585522111E1,31[&rate=7.731489892509699E-4]:1.982585522111E1)[&rate=3.703738759141882E-4]:5.17910191079E1,23[&rate=5.377012076378003E-4]:7.161687432901E1)[&rate=5.142595691639368E-4]:1.848838425599E0)[&rate=2.847363333248489E-4]:3.697177870488E0)[&rate=2.5445568214790414E-4]:3.68316800085E0,(17[&rate=0.0010042218156638494]:6.9997896511E1,(27[&rate=6.135356247433027E-4]:3.34253101085E1,28[&rate=0.0010042218156638494]:3.34253101085E1)[&rate=9.392607560333663E-4]:3.657258640251E1)[&rate=2.1652890150743452E-4]:1.084816211494E1)[&rate=0.001767527490188106]:4.520405619543E1); +tree STATE_730000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55131.80379113949,EEF_ucld_branchRates=-266.168517335019,lnP=-55131.80379113949,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.647144087074688E-4]:7.101155294058E0,9[&rate=6.740492920858453E-4]:7.101155294058E0)[&rate=4.745976159806863E-4]:8.767169712958E0,15[&rate=7.209268917298747E-4]:1.586832500702E1)[&rate=7.089149739806845E-4]:9.800012542334E1,(14[&rate=0.001495872497831559]:4.280745384554E1,24[&rate=0.0011328609607325862]:4.280745384554E1)[&rate=9.101190668720371E-4]:7.106099658482E1)[&rate=9.918913332450212E-4]:5.294251816873E0,(((25[&rate=9.918913332450212E-4]:7.303258407362E1,(12[&rate=0.001099357543121468]:7.094137043432E1,((16[&rate=4.6228154670612063E-4]:3.324570871578E1,((22[&rate=0.0012626295528364237]:3.027294996807E0,21[&rate=7.584547903961223E-4]:3.027294996807E0)[&rate=0.001069030908587114]:3.652288845013E0,20[&rate=6.854970560363986E-4]:6.679583841819E0)[&rate=9.486902757869499E-4]:2.656612487396E1)[&rate=9.696294063288104E-4]:3.585564217513E1,(((30[&rate=4.8655961662247624E-4]:5.201479155378E1,26[&rate=5.538881674987379E-4]:5.201479155378E1)[&rate=7.089149739806845E-4]:8.412617476927E0,32[&rate=2.998997133194518E-4]:6.042740903071E1)[&rate=3.738118256348569E-4]:7.441775945997E0,((((3[&rate=7.988073898077652E-4]:1.88738434551E0,4[&rate=5.647144087074688E-4]:1.88738434551E0)[&rate=4.982332694464857E-4]:4.13840554305E-1,2[&rate=7.456712569923056E-4]:2.301224899815E0)[&rate=8.429460850682915E-4]:1.012398956188E1,5[&rate=7.715503101144333E-4]:1.24252144617E1)[&rate=0.001099357543121468]:2.024196087324E0,((7[&rate=2.998997133194518E-4]:9.872347513442E0,6[&rate=6.627495122872893E-4]:9.872347513442E0)[&rate=6.515790633218831E-4]:1.149946919438E0,1[&rate=2.998997133194518E-4]:1.102229443288E1)[&rate=6.295539675120838E-4]:3.427116116141E0)[&rate=4.982332694464857E-4]:5.341977442769E1)[&rate=9.486902757869499E-4]:1.232165914205E0)[&rate=0.001495872497831559]:1.840019543411E0)[&rate=8.587186234898988E-4]:2.091213639295E0)[&rate=7.331708047181826E-4]:1.851350903587E0,((((33[&rate=8.429460850682915E-4]:5.795037900231E1,13[&rate=4.3623470048674025E-4]:5.795037900231E1)[&rate=4.495291499934678E-4]:1.081282030538E1,(11[&rate=6.186638584017472E-4]:1.355525496209E1,29[&rate=5.755008082739152E-4]:1.355525496209E1)[&rate=9.101190668720371E-4]:5.520794434559E1)[&rate=5.862691228446282E-4]:1.526351258399E0,(19[&rate=8.587186234898988E-4]:1.259959161125E1,18[&rate=7.089149739806845E-4]:1.259959161125E1)[&rate=4.074060315417476E-4]:5.768995895484E1)[&rate=9.486902757869499E-4]:1.650194034578E0,((10[&rate=3.3037124662341953E-4]:1.876505235261E1,31[&rate=9.289009833428938E-4]:1.876505235261E1)[&rate=3.3037124662341953E-4]:5.200723263906E1,23[&rate=6.515790633218831E-4]:7.077228499167E1)[&rate=8.922257070953348E-4]:1.167459608985E0)[&rate=3.738118256348569E-4]:2.944190376546E0)[&rate=5.755008082739152E-4]:3.440669051437E0,(17[&rate=7.331708047181826E-4]:7.478101257142E1,(27[&rate=4.745976159806863E-4]:3.549648188096E1,28[&rate=7.988073898077652E-4]:3.549648188096E1)[&rate=6.186638584017472E-4]:3.928453069046E1)[&rate=6.627495122872893E-4]:3.543591457219E0)[&rate=0.001647861734939]:4.083809821859E1); +tree STATE_740000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55126.60025537764,EEF_ucld_branchRates=-266.168517335019,lnP=-55126.60025537764,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.5079674202364196E-4]:7.703761754284E0,9[&rate=5.695444773509621E-4]:7.703761754284E0)[&rate=4.626130554710346E-4]:7.745919236501E0,15[&rate=7.338023253706403E-4]:1.544968099079E1)[&rate=6.980582000349908E-4]:1.066528773447E2,(14[&rate=0.001574717516386066]:4.850572664216E1,24[&rate=5.489320732060565E-4]:4.850572664216E1)[&rate=9.555586641063289E-4]:7.359683169329E1)[&rate=7.590587178879896E-4]:2.992233415676E0,(((25[&rate=7.857457772505928E-4]:7.330244429213E1,(12[&rate=8.291658861006681E-4]:7.214993590809E1,((16[&rate=4.740849913178133E-4]:3.260322047095E1,((22[&rate=6.642852194112276E-4]:2.930912245307E0,21[&rate=7.216296532190483E-4]:2.930912245307E0)[&rate=9.555586641063289E-4]:2.882313236993E0,20[&rate=9.145885169362876E-4]:5.8132254823E0)[&rate=0.0012117130813143443]:2.678999498865E1)[&rate=0.001057354581482341]:3.766157308385E1,(((30[&rate=6.005004457168117E-4]:4.985762433584E1,26[&rate=6.980582000349908E-4]:4.985762433584E1)[&rate=0.0014316796365791327]:5.789941750504E0,32[&rate=4.740849913178133E-4]:5.564756608634E1)[&rate=6.425868761123275E-4]:1.072621740463E1,((((3[&rate=4.257901207032593E-4]:1.67986013645E0,4[&rate=4.257901207032593E-4]:1.67986013645E0)[&rate=5.489320732060565E-4]:8.056121164093E-1,2[&rate=5.901523851577283E-4]:2.48547225286E0)[&rate=7.997206797661216E-4]:9.328822112136E0,5[&rate=9.344499766007618E-4]:1.1814294365E1)[&rate=3.6576035860777116E-4]:1.561487026195E0,((7[&rate=2.9447170031883036E-4]:7.656186005086E0,6[&rate=6.109010194392864E-4]:7.656186005086E0)[&rate=6.980582000349908E-4]:2.239901212827E0,1[&rate=3.238921143560036E-4]:9.896087217913E0)[&rate=8.779840469628108E-4]:3.479694173277E0)[&rate=6.866110411216975E-4]:5.299800209978E1)[&rate=6.005004457168117E-4]:3.891010063832E0)[&rate=4.626130554710346E-4]:1.885142353287E0)[&rate=8.609947362058409E-4]:1.152508384042E0)[&rate=3.6576035860777116E-4]:1.070594667341E0,((((33[&rate=5.489320732060565E-4]:5.382788768487E1,13[&rate=6.319273304807705E-4]:5.382788768487E1)[&rate=6.866110411216975E-4]:1.305362889968E1,(11[&rate=4.740849913178133E-4]:1.285120266196E1,29[&rate=8.141765270534006E-4]:1.285120266196E1)[&rate=9.344499766007618E-4]:5.403031392259E1)[&rate=8.779840469628108E-4]:1.264033537023E0,(19[&rate=9.344499766007618E-4]:1.177495731508E1,18[&rate=0.0010023706401884815]:1.177495731508E1)[&rate=2.9447170031883036E-4]:5.637059280649E1)[&rate=8.779840469628108E-4]:2.283863614768E0,((10[&rate=6.213710317707395E-4]:1.875232251647E1,31[&rate=0.001057354581482341]:1.875232251647E1)[&rate=3.466029167042172E-4]:5.069071999074E1,23[&rate=5.592484596209643E-4]:6.94430425072E1)[&rate=7.46268687889429E-4]:9.863712291373E-1)[&rate=6.533669262917066E-4]:3.943625223134E0)[&rate=6.319273304807705E-4]:2.677719579803E0,(17[&rate=7.997206797661216E-4]:6.887674406461E1,(27[&rate=2.9447170031883036E-4]:3.290195614323E1,28[&rate=0.0010890570777127497]:3.290195614323E1)[&rate=7.216296532190483E-4]:3.597478792138E1)[&rate=3.980849543611684E-4]:8.174014474669E0)[&rate=0.0014316796365791327]:4.804403321184E1); +tree STATE_750000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55165.13148245269,EEF_ucld_branchRates=-266.168517335019,lnP=-55165.13148245269,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.491519171407602E-4]:1.13257396578E1,9[&rate=6.367032323998896E-4]:1.13257396578E1)[&rate=7.858985904720106E-4]:4.464111684496E0,15[&rate=4.1233866807259843E-4]:1.57898513423E1)[&rate=6.875024701695477E-4]:1.092846716327E2,(14[&rate=0.0012135271601642415]:4.944525647579E1,24[&rate=5.521552390624093E-4]:4.944525647579E1)[&rate=0.0010441679181449727]:7.562926649923E1)[&rate=9.262993402486683E-4]:1.723696214156E0,(((25[&rate=7.708275361737002E-4]:7.181708005364E1,((((30[&rate=6.121845853669823E-4]:4.985660910622E1,26[&rate=7.14127096657731E-4]:4.985660910622E1)[&rate=0.0010176993850459428]:9.995868247001E0,32[&rate=3.4625317941899754E-4]:5.985247735322E1)[&rate=4.6653751154651294E-4]:7.996827625354E0,((16[&rate=3.974271783369831E-4]:3.380740319842E1,((22[&rate=8.338699316080518E-4]:3.257441736696E0,21[&rate=7.56148400880097E-4]:3.257441736696E0)[&rate=6.367032323998896E-4]:3.227919911685E0,20[&rate=9.928761850134726E-4]:6.48536164838E0)[&rate=0.001311098279928485]:2.732204155004E1)[&rate=9.928761850134726E-4]:3.371522301258E1,((((3[&rate=3.2549049638558433E-4]:1.432620961347E0,4[&rate=0.0010441679181449727]:1.432620961347E0)[&rate=5.640993501024151E-4]:3.934199057588E-1,2[&rate=6.000746086707974E-4]:1.826040867106E0)[&rate=3.8165268046827126E-4]:9.803756223352E0,5[&rate=3.4625317941899754E-4]:1.162979709046E1)[&rate=6.617539259616744E-4]:2.042858207699E0,((7[&rate=5.521552390624093E-4]:7.913622803886E0,6[&rate=9.262993402486683E-4]:7.913622803886E0)[&rate=7.14127096657731E-4]:1.743947557529E0,1[&rate=8.68642972479051E-4]:9.657570361415E0)[&rate=7.278289091363475E-4]:4.015084936742E0)[&rate=4.535850203136672E-4]:5.384997091285E1)[&rate=4.1233866807259843E-4]:3.266787675755E-1)[&rate=0.001854090422241169]:1.851111882531E0,12[&rate=9.928761850134726E-4]:6.970041686111E1)[&rate=6.745302046339041E-4]:2.116663192535E0)[&rate=7.56148400880097E-4]:1.906772436903E0,((((33[&rate=9.473390789692693E-4]:4.850834425682E1,13[&rate=2.698812133915219E-4]:4.850834425682E1)[&rate=3.0109868906779026E-4]:2.007204490211E1,(19[&rate=8.509392570586737E-4]:1.274367209727E1,18[&rate=0.0012135271601642415]:1.274367209727E1)[&rate=2.698812133915219E-4]:5.583671706166E1)[&rate=7.858985904720106E-4]:1.489063433765E0,(11[&rate=4.7921810677827465E-4]:1.213878324424E1,29[&rate=6.000746086707974E-4]:1.213878324424E1)[&rate=8.870497241331672E-4]:5.793066934846E1)[&rate=2.698812133915219E-4]:2.53817815615E0,((10[&rate=6.745302046339041E-4]:1.574844011456E1,31[&rate=8.68642972479051E-4]:1.574844011456E1)[&rate=5.521552390624093E-4]:5.393796591546E1,23[&rate=5.521552390624093E-4]:6.968640603003E1)[&rate=4.6653751154651294E-4]:2.921224718818E0)[&rate=9.694820211563088E-4]:1.116221741701E0)[&rate=0.001854090422241169]:4.19015990179E0,(17[&rate=7.708275361737002E-4]:7.160357780666E1,(27[&rate=4.535850203136672E-4]:2.985614862999E1,28[&rate=7.278289091363475E-4]:2.985614862999E1)[&rate=0.0011364778888983934]:4.174742917667E1)[&rate=0.0011031761422500594]:6.310434585674E0)[&rate=0.0016618610145439333]:4.888420679684E1); +tree STATE_760000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55150.08139216103,EEF_ucld_branchRates=-266.168517335019,lnP=-55150.08139216103,RHOD_ucld_branchRates=-266.168517335019] = [&R] 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+tree STATE_770000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55114.92162296427,EEF_ucld_branchRates=-266.168517335019,lnP=-55114.92162296427,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.432835519837599E-4]:1.100973124427E1,9[&rate=4.8626015958343563E-4]:1.100973124427E1)[&rate=3.6454536364777235E-4]:5.649648486163E0,15[&rate=9.773747081365596E-4]:1.665937973043E1)[&rate=7.041365574460978E-4]:1.088979418912E2,(14[&rate=0.00100683793147973]:5.055464428328E1,24[&rate=5.570724333007862E-4]:5.055464428328E1)[&rate=8.238640701612584E-4]:7.500267733839E1)[&rate=0.0015473551116608954]:1.90590494296E0,(((25[&rate=6.66750193656917E-4]:7.568801303577E1,(12[&rate=6.432835519837599E-4]:7.28395630592E1,((16[&rate=2.5350035197253395E-4]:3.624643042751E1,((22[&rate=0.0018819295968046754]:3.169847917002E0,21[&rate=2.809302220991419E-4]:3.169847917002E0)[&rate=5.673801276555682E-4]:5.374182723095E0,20[&rate=4.963571768224952E-4]:8.544030640097E0)[&rate=0.0010394458163883933]:2.770239978741E1)[&rate=9.773747081365596E-4]:3.514029213497E1,(((30[&rate=7.594550785275435E-4]:4.843669821979E1,26[&rate=4.963571768224952E-4]:4.843669821979E1)[&rate=9.026669316639456E-4]:1.089160199797E1,32[&rate=3.773694205585881E-4]:5.932830021776E1)[&rate=5.570724333007862E-4]:1.015625933124E1,((((3[&rate=7.449171477244499E-4]:1.581049982656E0,4[&rate=9.773747081365596E-4]:1.581049982656E0)[&rate=8.419266792272108E-4]:5.692743077229E-1,2[&rate=4.963571768224952E-4]:2.150324290379E0)[&rate=4.2374920021226984E-4]:8.280531199389E0,5[&rate=3.509469086713054E-4]:1.043085548977E1)[&rate=6.319097002157012E-4]:3.133736605239E0,((7[&rate=3.89591068401691E-4]:8.514600229056E0,6[&rate=5.88308888642596E-4]:8.514600229056E0)[&rate=8.609824782466007E-4]:1.189340788068E0,1[&rate=7.449171477244499E-4]:9.703941017125E0)[&rate=4.2374920021226984E-4]:3.860651077882E0)[&rate=7.173032727879145E-4]:5.5919967454E1)[&rate=3.89591068401691E-4]:1.902163013473E0)[&rate=9.026669316639456E-4]:1.452840496727E0)[&rate=5.88308888642596E-4]:2.848449976572E0)[&rate=6.432835519837599E-4]:6.356517176802E-1,((((11[&rate=5.570724333007862E-4]:1.440547607658E1,29[&rate=7.745510698353868E-4]:1.440547607658E1)[&rate=5.777866535606864E-4]:5.443858763138E1,(33[&rate=7.902677421602243E-4]:5.598164503662E1,13[&rate=3.203025450350539E-4]:5.598164503662E1)[&rate=8.609824782466007E-4]:1.286241867135E1)[&rate=0.0011177048600246257]:1.20168189338E0,(19[&rate=7.902677421602243E-4]:1.397235759973E1,18[&rate=6.788925687625579E-4]:1.397235759973E1)[&rate=5.064289247136427E-4]:5.607338800162E1)[&rate=2.0843238030718346E-4]:3.542968383984E0,((10[&rate=6.097700838501141E-4]:1.417768651896E1,31[&rate=8.419266792272108E-4]:1.417768651896E1)[&rate=2.5350035197253395E-4]:5.807526881403E1,23[&rate=3.89591068401691E-4]:7.225295533299E1)[&rate=6.548891178634315E-4]:1.335758652342E0)[&rate=3.0224038688422003E-4]:2.734950768121E0)[&rate=4.2374920021226984E-4]:4.723307623727E0,(17[&rate=6.66750193656917E-4]:7.3448718883E1,(27[&rate=3.0224038688422003E-4]:3.512903799491E1,28[&rate=5.064289247136427E-4]:3.512903799491E1)[&rate=6.207454408416914E-4]:3.83196808881E1)[&rate=7.902677421602243E-4]:7.598253494177E0)[&rate=0.0015473551116608954]:4.641625418744E1); +tree STATE_780000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55093.86456053107,EEF_ucld_branchRates=-266.168517335019,lnP=-55093.86456053107,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.6012466573501645E-4]:1.053746753645E1,9[&rate=7.843047860504468E-4]:1.053746753645E1)[&rate=5.0581410233717E-4]:6.489712871796E0,15[&rate=6.668549178795747E-4]:1.702718040824E1)[&rate=8.015458992817076E-4]:1.081576364707E2,(14[&rate=0.0010088452388507896]:4.686537362107E1,24[&rate=7.843047860504468E-4]:4.686537362107E1)[&rate=8.794625563691221E-4]:7.831944325789E1)[&rate=9.018075066192845E-4]:2.199164145722E0,(((25[&rate=5.489645631946158E-4]:7.796823688088E1,(12[&rate=8.794625563691221E-4]:7.628120359625E1,((16[&rate=3.8494481865383707E-4]:3.925844318142E1,((22[&rate=9.256431578504333E-4]:3.898552965929E0,21[&rate=6.171938901760674E-4]:3.898552965929E0)[&rate=6.668549178795747E-4]:3.507791143949E0,20[&rate=7.518753656901365E-4]:7.406344109878E0)[&rate=0.001078375863887524]:3.185209907155E1)[&rate=0.0016588425512117208]:3.513292021811E1,(((30[&rate=4.738414741421734E-4]:5.233697041903E1,26[&rate=5.489645631946158E-4]:5.233697041903E1)[&rate=6.414866623474475E-4]:9.021800666699E0,32[&rate=3.8494481865383707E-4]:6.135877108573E1)[&rate=2.8319725278046085E-4]:1.110715814315E1,((((3[&rate=5.823601762645096E-4]:1.899038346581E0,4[&rate=5.380652963858298E-4]:1.899038346581E0)[&rate=4.082685346856245E-4]:4.65168179082E-1,2[&rate=7.518753656901365E-4]:2.364206525663E0)[&rate=3.329110694001762E-4]:1.023781694827E1,5[&rate=2.8319725278046085E-4]:1.260202347393E1)[&rate=2.616476222383976E-4]:1.828179289169E0,((7[&rate=4.8450094731595226E-4]:9.960393812488E0,6[&rate=2.3410886538660942E-4]:9.960393812488E0)[&rate=4.8450094731595226E-4]:1.001423899234E0,1[&rate=2.3410886538660942E-4]:1.096181771172E1)[&rate=5.710938812431369E-4]:3.46838505138E0)[&rate=6.171938901760674E-4]:5.803572646577E1)[&rate=7.074222519196173E-4]:1.925434170655E0)[&rate=0.0020503506414571372]:1.889840196723E0)[&rate=0.0012215168051150083]:1.687033284633E0)[&rate=5.380652963858298E-4]:2.020382433348E0,((((11[&rate=8.794625563691221E-4]:1.517329121857E1,29[&rate=6.540233155484778E-4]:1.517329121857E1)[&rate=8.384951592427277E-4]:5.376545967824E1,(33[&rate=7.217520812580537E-4]:5.494440421869E1,13[&rate=4.8450094731595226E-4]:5.494440421869E1)[&rate=6.414866623474475E-4]:1.399434667812E1)[&rate=8.195773665069302E-4]:2.145488792667E0,(19[&rate=6.171938901760674E-4]:1.705984317484E1,18[&rate=0.0010418052375398364]:1.705984317484E1)[&rate=3.7276616926621515E-4]:5.402439651463E1)[&rate=3.7276616926621515E-4]:5.919953961972E0,((10[&rate=8.384951592427277E-4]:1.517320766874E1,31[&rate=0.0010418052375398364]:1.517320766874E1)[&rate=2.3410886538660942E-4]:6.18247662637E1,23[&rate=6.292183926325313E-4]:7.699797393244E1)[&rate=2.8319725278046085E-4]:6.219719009778E-3)[&rate=3.8494481865383707E-4]:2.984425662784E0)[&rate=8.794625563691221E-4]:2.611635800183E0,(17[&rate=6.668549178795747E-4]:7.507192080716E1,(27[&rate=4.8450094731595226E-4]:3.492321718596E1,28[&rate=9.788162686139937E-4]:3.492321718596E1)[&rate=5.937857845228743E-4]:4.01487036212E1)[&rate=3.96754488019604E-4]:7.528334307257E0)[&rate=0.0016588425512117208]:4.478372591027E1); +tree STATE_790000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55129.87052347309,EEF_ucld_branchRates=-266.168517335019,lnP=-55129.87052347309,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.066097019294435E-4]:1.07568141584E1,9[&rate=8.67989763853159E-4]:1.07568141584E1)[&rate=4.6356073087012426E-4]:9.37125547926E0,15[&rate=2.2676083374627897E-4]:2.012806963766E1)[&rate=8.67989763853159E-4]:9.872108264778E1,(14[&rate=0.0013676113136323678]:4.245714471267E1,24[&rate=9.80288710297613E-4]:4.245714471267E1)[&rate=8.020875789748006E-4]:7.639200757277E1)[&rate=5.633341908903434E-4]:6.884003169277E0,((((12[&rate=6.390353822594545E-4]:7.567921348753E1,((16[&rate=5.633341908903434E-4]:3.876191691889E1,((22[&rate=3.447167184332075E-4]:3.468309035193E0,21[&rate=3.07916205099355E-4]:3.468309035193E0)[&rate=7.638194289318662E-4]:4.390084770045E0,20[&rate=4.424107250105804E-4]:7.858393805238E0)[&rate=0.0016812837993772415]:3.090352311365E1)[&rate=9.80288710297613E-4]:3.528551690521E1,(((((3[&rate=4.424107250105804E-4]:2.171815157335E0,4[&rate=2.470891429183894E-4]:2.171815157335E0)[&rate=3.2067368401077776E-4]:4.723965727751E-1,2[&rate=2.0099040236757344E-4]:2.64421173011E0)[&rate=7.460135929861184E-4]:8.783333965784E0,5[&rate=3.447167184332075E-4]:1.142754569589E1)[&rate=5.066097019294435E-4]:2.771749475436E0,((7[&rate=3.6743046800013373E-4]:9.59617105114E0,6[&rate=6.125877263206706E-4]:9.59617105114E0)[&rate=2.470891429183894E-4]:1.27801552066E0,1[&rate=3.6743046800013373E-4]:1.08741865718E1)[&rate=6.390353822594545E-4]:3.32510859953E0)[&rate=6.125877263206706E-4]:5.906595491277E1,((30[&rate=8.446845102300667E-4]:4.880507558075E1,26[&rate=6.968735921907402E-4]:4.880507558075E1)[&rate=2.470891429183894E-4]:1.504868501029E1,32[&rate=4.957080547027265E-4]:6.385376059104E1)[&rate=6.968735921907402E-4]:9.411489493062E0)[&rate=6.670261269058315E-4]:7.821837400018E-1)[&rate=0.0012063415462943848]:1.631779663423E0)[&rate=5.516302283112064E-4]:1.482976541483E0,25[&rate=5.874260512070298E-4]:7.716219002901E1)[&rate=4.957080547027265E-4]:4.90155812249E-1,((((11[&rate=8.020875789748006E-4]:1.801527753452E1,29[&rate=7.460135929861184E-4]:1.801527753452E1)[&rate=8.446845102300667E-4]:5.128338566482E1,(33[&rate=0.001053787461148689]:5.221393998245E1,13[&rate=4.424107250105804E-4]:5.221393998245E1)[&rate=5.874260512070298E-4]:1.708472321689E1)[&rate=4.424107250105804E-4]:1.226723825238E0,(19[&rate=0.001053787461148689]:1.700916822088E1,18[&rate=6.125877263206706E-4]:1.700916822088E1)[&rate=4.424107250105804E-4]:5.35162188037E1)[&rate=2.2676083374627897E-4]:5.026086317692E0,((10[&rate=0.001053787461148689]:1.856373185197E1,31[&rate=5.401255454026521E-4]:1.856373185197E1)[&rate=3.2067368401077776E-4]:5.691282458383E1,23[&rate=2.6451651703730784E-4]:7.54765564358E1)[&rate=6.670261269058315E-4]:7.491690647019E-2)[&rate=5.287999956060568E-4]:2.100872498988E0)[&rate=3.447167184332075E-4]:1.890025224509E0,(17[&rate=7.638194289318662E-4]:7.079170717013E1,(27[&rate=3.2067368401077776E-4]:3.44566390445E1,28[&rate=8.227753045637104E-4]:3.44566390445E1)[&rate=8.929037701224505E-4]:3.633506812563E1)[&rate=5.633341908903434E-4]:8.750663895632E0)[&rate=0.0016812837993772415]:4.619078438895E1); +tree STATE_800000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55148.49088986089,EEF_ucld_branchRates=-266.168517335019,lnP=-55148.49088986089,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.6600320265904705E-4]:9.926514079946E0,9[&rate=5.665981447146745E-4]:9.926514079946E0)[&rate=7.29144087000873E-4]:9.2506669721E0,15[&rate=3.781369414639386E-4]:1.917718105205E1)[&rate=8.662676960153982E-4]:9.556696535738E1,(14[&rate=0.001379822144774771]:4.265043410438E1,24[&rate=0.001050071864526156]:4.265043410438E1)[&rate=6.122605519141992E-4]:7.209371230505E1)[&rate=9.336753111654173E-4]:1.212100040707E1,((((((11[&rate=6.740167127410072E-4]:1.287342329804E1,29[&rate=4.906796778770233E-4]:1.287342329804E1)[&rate=9.097806469356501E-4]:5.512980958064E1,(33[&rate=8.662676960153982E-4]:5.817699066747E1,13[&rate=3.781369414639386E-4]:5.817699066747E1)[&rate=5.336952283928252E-4]:9.826242211204E0)[&rate=7.29144087000873E-4]:5.01393375628E-1,(19[&rate=6.122605519141992E-4]:1.624224105588E1,18[&rate=5.777848454341919E-4]:1.624224105588E1)[&rate=5.777848454341919E-4]:5.226238519843E1)[&rate=4.139162136281174E-4]:7.068940843276E0,((10[&rate=8.873768033140352E-4]:1.870079887015E1,31[&rate=4.906796778770233E-4]:1.870079887015E1)[&rate=4.906796778770233E-4]:5.639164562231E1,23[&rate=3.0631017123191256E-4]:7.509244449246E1)[&rate=5.445713271878738E-4]:4.811226051216E-1)[&rate=3.6539181228348804E-4]:2.708625517726E0,(25[&rate=6.241231135788983E-4]:7.716705877659E1,(12[&rate=7.440032101561017E-4]:7.613830177175E1,((((((3[&rate=7.007982057004645E-4]:2.719886227281E0,4[&rate=2.8776966993385226E-4]:2.719886227281E0)[&rate=8.873768033140352E-4]:3.710563434871E-1,2[&rate=8.092264283029301E-4]:3.090942570768E0)[&rate=8.092264283029301E-4]:1.047001729765E1,5[&rate=2.3817093822343883E-4]:1.356095986841E1)[&rate=0.0012963035526124492]:1.70806065955E0,((7[&rate=2.8776966993385226E-4]:9.794519599967E0,6[&rate=4.252773511528652E-4]:9.794519599967E0)[&rate=6.485326580780604E-4]:9.363293119524E-1,1[&rate=7.753364589214605E-4]:1.073084891192E1)[&rate=1.9294741709664355E-4]:4.538171616045E0)[&rate=5.121272946735993E-4]:5.494626770865E1,((30[&rate=8.092264283029301E-4]:4.956595824722E1,26[&rate=5.555329879645703E-4]:4.956595824722E1)[&rate=4.906796778770233E-4]:9.947328563267E0,32[&rate=4.906796778770233E-4]:5.951328681049E1)[&rate=3.22824638407558E-4]:1.070200142613E1)[&rate=6.122605519141992E-4]:3.832241928341E0,(16[&rate=3.9041287502112975E-4]:4.250639929542E1,((22[&rate=5.891114502999446E-4]:4.14436950977E0,21[&rate=8.462921529322135E-4]:4.14436950977E0)[&rate=4.252773511528652E-4]:4.199139449549E0,20[&rate=3.9041287502112975E-4]:8.343508959319E0)[&rate=0.0010866991263098957]:3.41628903361E1)[&rate=0.0010866991263098957]:3.154113086954E1)[&rate=0.001017053966644327]:2.090771606788E0)[&rate=0.002057923185208387]:1.028757004842E0)[&rate=2.8776966993385226E-4]:1.11513383872E0)[&rate=6.740167127410072E-4]:4.748221139495E0,(17[&rate=6.485326580780604E-4]:7.406777780634E1,(27[&rate=6.611273070934404E-4]:2.714531365913E1,28[&rate=0.0010866991263098957]:2.714531365913E1)[&rate=8.873768033140352E-4]:4.692246414721E1)[&rate=6.611273070934404E-4]:8.962635948462E0)[&rate=0.0016671679850240426]:4.38347330617E1); +tree STATE_810000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55130.41961333657,EEF_ucld_branchRates=-266.168517335019,lnP=-55130.41961333657,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.265597592001004E-4]:8.894066579974E0,9[&rate=4.942008716248169E-4]:8.894066579974E0)[&rate=4.942008716248169E-4]:7.413297552034E0,15[&rate=6.10615555232763E-4]:1.630736413201E1)[&rate=8.701281634825918E-4]:1.05429721927E2,(14[&rate=0.0014487090019437137]:5.06709934125E1,24[&rate=8.146421786052459E-4]:5.06709934125E1)[&rate=8.146421786052459E-4]:7.106609264646E1)[&rate=4.751169591625182E-4]:5.833296334621E0,((((((11[&rate=8.505166446613319E-4]:1.634423124338E1,29[&rate=5.705675442978731E-4]:1.634423124338E1)[&rate=8.146421786052459E-4]:5.602972737291E1,(33[&rate=8.146421786052459E-4]:5.777494628604E1,13[&rate=4.3578784528673376E-4]:5.777494628604E1)[&rate=3.0911402456563987E-4]:1.459901233025E1)[&rate=7.82343550272916E-4]:8.155563134595E-1,(19[&rate=5.903294744818761E-4]:1.638856103265E1,18[&rate=6.315659485059258E-4]:1.638856103265E1)[&rate=3.0911402456563987E-4]:5.680095389711E1)[&rate=9.380981198301507E-4]:2.853521681698E0,((10[&rate=8.505166446613319E-4]:1.703364988461E1,31[&rate=7.672816849567449E-4]:1.703364988461E1)[&rate=3.0911402456563987E-4]:5.806754549172E1,23[&rate=5.416248355097677E-4]:7.510119537633E1)[&rate=3.265597592001004E-4]:9.418412351273E-1)[&rate=3.93015342484971E-4]:2.437479239093E0,(25[&rate=6.423383786150817E-4]:7.682180135581E1,(12[&rate=6.315659485059258E-4]:7.577173523112E1,((((((3[&rate=5.705675442978731E-4]:2.936515268322E0,4[&rate=8.505166446613319E-4]:2.936515268322E0)[&rate=2.1750220322459818E-4]:2.172176350139E-1,2[&rate=0.0010274124997002878]:3.153732903336E0)[&rate=4.0421281044251186E-4]:8.987374165034E0,5[&rate=7.389536873156429E-4]:1.214110706837E1)[&rate=4.8468639813685797E-4]:2.457582565629E0,((7[&rate=6.423383786150817E-4]:9.212323691408E0,6[&rate=7.672816849567449E-4]:9.212323691408E0)[&rate=4.0421281044251186E-4]:7.637319843259E-1,1[&rate=4.942008716248169E-4]:9.976055675733E0)[&rate=6.003985464770884E-4]:4.622633958265E0)[&rate=6.423383786150817E-4]:5.726832544213E1,((30[&rate=9.943565750886703E-4]:5.150924347901E1,26[&rate=6.879378317525299E-4]:5.150924347901E1)[&rate=5.8039128041587E-4]:1.133732447301E1,32[&rate=3.93015342484971E-4]:6.284656795201E1)[&rate=4.3578784528673376E-4]:9.020447124121E0)[&rate=4.1502840590154513E-4]:2.823845134801E0,(16[&rate=5.22614015543845E-4]:4.151054091098E1,((22[&rate=0.001161169638341848]:3.754401843862E0,21[&rate=3.41991848716285E-4]:3.754401843862E0)[&rate=5.511999195063704E-4]:3.773258461487E0,20[&rate=4.255342167536232E-4]:7.527660305349E0)[&rate=0.0012267035700506072]:3.398288060563E1)[&rate=9.943565750886703E-4]:3.318031929996E1)[&rate=6.761103258563157E-4]:1.080875020185E0)[&rate=6.003985464770884E-4]:1.050066124693E0)[&rate=5.8039128041587E-4]:1.658714494734E0)[&rate=2.6174426815780483E-4]:2.166873964637E0,(17[&rate=7.126296315507377E-4]:7.250086945452E1,(27[&rate=6.315659485059258E-4]:2.824953325732E1,28[&rate=9.648256352788107E-4]:2.824953325732E1)[&rate=7.126296315507377E-4]:4.42513361972E1)[&rate=5.131462011710763E-4]:8.146520360661E0)[&rate=0.0017433905122138903]:4.69229925784E1); +tree STATE_820000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.955186247586,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.955186247586,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.332124228843848E-4]:9.671723702351E0,9[&rate=7.15706527610776E-4]:9.671723702351E0)[&rate=6.102503340531109E-4]:7.133002417043E0,15[&rate=6.607756500971294E-4]:1.680472611939E1)[&rate=8.059917556661829E-4]:1.02212722988E2,(14[&rate=0.001464088097147455]:4.678857155303E1,24[&rate=8.059917556661829E-4]:4.678857155303E1)[&rate=9.070602582417531E-4]:7.222887755433E1)[&rate=0.001464088097147455]:9.038283451343E0,((((((11[&rate=6.503944520359247E-4]:1.811364166732E1,29[&rate=6.82079340325357E-4]:1.811364166732E1)[&rate=6.82079340325357E-4]:5.058839860866E1,(33[&rate=7.780128107971794E-4]:5.775241941031E1,13[&rate=4.941235496436815E-4]:5.775241941031E1)[&rate=4.4148563767205994E-4]:1.094962086567E1)[&rate=8.697517395669828E-4]:9.945467141455E-1,(19[&rate=6.401685688969046E-4]:1.416053220303E1,18[&rate=6.82079340325357E-4]:1.416053220303E1)[&rate=5.619544134326854E-4]:5.55360547871E1)[&rate=2.9353753896431086E-4]:5.446498337626E0,((10[&rate=4.6332216547537294E-4]:2.08418014719E1,31[&rate=9.73451410853909E-4]:2.08418014719E1)[&rate=3.215896434224814E-4]:5.279972037313E1,23[&rate=4.4148563767205994E-4]:7.364152184502E1)[&rate=7.15706527610776E-4]:1.501563482728E0)[&rate=8.059917556661829E-4]:2.93868305548E0,(25[&rate=5.907753665099115E-4]:7.683234830405E1,(12[&rate=8.697517395669828E-4]:7.580075463174E1,((((((3[&rate=4.7379963233827615E-4]:2.778209455231E0,4[&rate=3.613304746577767E-4]:2.778209455231E0)[&rate=6.102503340531109E-4]:6.029932490343E-1,2[&rate=5.332124228843848E-4]:3.381202704266E0)[&rate=6.201130693515213E-4]:8.301898303005E0,5[&rate=4.2998977579412385E-4]:1.168310100727E1)[&rate=7.042434766224994E-4]:3.186825728126E0,((7[&rate=4.525710667891741E-4]:7.633961865648E0,6[&rate=7.647681139087352E-4]:7.633961865648E0)[&rate=5.428132773334261E-4]:1.496039248489E0,1[&rate=6.713307052924297E-4]:9.130001114137E0)[&rate=3.613304746577767E-4]:5.739925621259E0)[&rate=4.7379963233827615E-4]:5.627095831806E1,((30[&rate=9.994768272568715E-4]:5.131486301914E1,26[&rate=5.907753665099115E-4]:5.131486301914E1)[&rate=8.363600110592104E-4]:1.054060934572E1,32[&rate=3.918821856078136E-4]:6.185547236486E1)[&rate=5.428132773334261E-4]:9.285412688597E0)[&rate=4.6332216547537294E-4]:2.395154919964E0,(16[&rate=3.613304746577767E-4]:4.063307981662E1,((22[&rate=7.647681139087352E-4]:3.681246959657E0,21[&rate=3.215896434224814E-4]:3.681246959657E0)[&rate=5.332124228843848E-4]:5.57271954453E0,20[&rate=8.526296622326537E-4]:9.253966504187E0)[&rate=0.001464088097147455]:3.137911331243E1)[&rate=0.0010602503380606546]:3.29029601568E1)[&rate=0.0010602503380606546]:2.264714658324E0)[&rate=0.0010602503380606546]:1.031593672302E0)[&rate=3.613304746577767E-4]:1.249420079184E0)[&rate=8.697517395669828E-4]:4.421067886137E0,(17[&rate=8.87846604280551E-4]:7.310657463236E1,(27[&rate=6.102503340531109E-4]:2.233426528246E1,28[&rate=8.526296622326537E-4]:2.233426528246E1)[&rate=6.102503340531109E-4]:5.07723093499E1)[&rate=6.503944520359247E-4]:9.396261637006E0)[&rate=0.0011893954343890954]:4.555289628934E1); +tree STATE_830000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55126.8531958235,EEF_ucld_branchRates=-266.168517335019,lnP=-55126.8531958235,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.958942865018653E-4]:7.980119830523E0,9[&rate=9.409357824418734E-4]:7.980119830523E0)[&rate=6.610092205557259E-4]:9.223074287036E0,15[&rate=5.640136042441317E-4]:1.720319411756E1)[&rate=7.215697147735745E-4]:1.03177976948E2,(14[&rate=0.001248797926431693]:5.101128745215E1,24[&rate=6.722214893654888E-4]:5.101128745215E1)[&rate=7.497794765887603E-4]:6.936988361345E1)[&rate=7.353173396272015E-4]:8.822578757667E0,((((((11[&rate=3.9537745351246215E-4]:1.765872030356E1,29[&rate=5.382771944612292E-4]:1.765872030356E1)[&rate=5.909167208060052E-4]:5.419026786031E1,(33[&rate=7.985752942302799E-4]:6.316680123389E1,13[&rate=4.1353642275682276E-4]:6.316680123389E1)[&rate=4.724598795905389E-4]:8.682186929977E0)[&rate=3.1712040905343885E-4]:1.253812802757E0,(19[&rate=5.298892934733114E-4]:1.589259478781E1,18[&rate=3.7604225355936045E-4]:1.589259478781E1)[&rate=5.640136042441317E-4]:5.721020617881E1)[&rate=4.0457609240361424E-4]:2.081218457384E0,((10[&rate=7.497794765887603E-4]:1.945417539857E1,31[&rate=8.591706622637619E-4]:1.945417539857E1)[&rate=3.3088217628321384E-4]:5.288462770702E1,23[&rate=6.097207020583551E-4]:7.233880310559E1)[&rate=3.1712040905343885E-4]:2.845216318423E0)[&rate=5.909167208060052E-4]:3.054949333202E0,(25[&rate=6.194411577770008E-4]:7.58509417795E1,(12[&rate=7.497794765887603E-4]:7.475059929462E1,((((((2[&rate=2.829135888180607E-4]:2.001651737464E0,4[&rate=6.097207020583551E-4]:2.001651737464E0)[&rate=5.817931495393205E-4]:9.191328349034E-1,3[&rate=6.722214893654888E-4]:2.920784572367E0)[&rate=8.372491380981624E-4]:1.021254595552E1,5[&rate=4.309059958531765E-4]:1.313333052788E1)[&rate=5.298892934733114E-4]:1.191963161146E0,((7[&rate=2.587163745161979E-4]:7.672308163403E0,6[&rate=4.5604259774885127E-4]:7.672308163403E0)[&rate=3.1712040905343885E-4]:8.614395739519E-1,1[&rate=2.829135888180607E-4]:8.533747737355E0)[&rate=7.650569687331224E-4]:5.791545951675E0)[&rate=5.215741123647838E-4]:5.790429613034E1,(16[&rate=3.7604225355936045E-4]:3.726786587316E1,((22[&rate=5.382771944612292E-4]:4.601106475017E0,21[&rate=8.833351477230477E-4]:4.601106475017E0)[&rate=5.553253287454143E-4]:4.338651081466E0,20[&rate=4.1353642275682276E-4]:8.939757556483E0)[&rate=0.001248797926431693]:2.832810831667E1)[&rate=6.958942865018653E-4]:3.496172394621E1)[&rate=9.409357824418734E-4]:4.426704831428E-1,((30[&rate=4.5604259774885127E-4]:5.307649583204E1,26[&rate=7.497794765887603E-4]:5.307649583204E1)[&rate=5.05108814335137E-4]:1.197683243844E1,32[&rate=4.642723446600494E-4]:6.505332827048E1)[&rate=5.728309913069172E-4]:7.618932032031E0)[&rate=7.084523981412808E-4]:2.078338992111E0)[&rate=3.1712040905343885E-4]:1.100342484881E0)[&rate=3.8588809152273316E-4]:2.388026977709E0)[&rate=5.382771944612292E-4]:3.035731214114E0,(17[&rate=6.00219506518633E-4]:7.432933597559E1,(27[&rate=3.9537745351246215E-4]:2.231170885024E1,28[&rate=0.001248797926431693]:2.231170885024E1)[&rate=4.887745314023434E-4]:5.201762712535E1)[&rate=4.724598795905389E-4]:6.94536399574E0)[&rate=0.0010188069351768198]:4.792904985194E1); +tree STATE_840000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55144.44416435281,EEF_ucld_branchRates=-266.168517335019,lnP=-55144.44416435281,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.2709341303808607E-4]:8.862564492099E0,9[&rate=6.590233854011752E-4]:8.862564492099E0)[&rate=3.090904818443952E-4]:6.435572507619E0,15[&rate=4.054503643779172E-4]:1.529813699972E1)[&rate=7.464578118769488E-4]:1.035505049673E2,(14[&rate=0.001041848862190698]:5.602968209521E1,24[&rate=0.0011253537565541114]:5.602968209521E1)[&rate=9.776645644225662E-4]:6.281895987179E1)[&rate=6.154434763605601E-4]:5.708121989715E0,(((12[&rate=8.069311150300278E-4]:7.410711948232E1,(((16[&rate=3.423697808295355E-4]:3.636684338621E1,((22[&rate=8.605659383924514E-4]:3.226450022258E0,21[&rate=8.238527819250804E-4]:3.226450022258E0)[&rate=4.8720247463739737E-4]:4.391682484925E0,20[&rate=7.754141344016944E-4]:7.618132507183E0)[&rate=0.0014749735041676374]:2.874871087903E1)[&rate=9.021144022016739E-4]:3.527653971936E1,((30[&rate=6.590233854011752E-4]:5.250496470243E1,26[&rate=6.478002461523801E-4]:5.250496470243E1)[&rate=8.806436433972298E-4]:9.872273792052E0,32[&rate=3.940892745915221E-4]:6.237723849448E1)[&rate=6.705037937248048E-4]:9.266144611098E0)[&rate=7.754141344016944E-4]:6.002056453568E-1,((((2[&rate=5.746233244211279E-4]:1.572489287693E0,4[&rate=6.26031688995276E-4]:1.572489287693E0)[&rate=3.090904818443952E-4]:1.342299537303E0,3[&rate=0.0014749735041676374]:2.914788824996E0)[&rate=4.968791538529423E-4]:1.036002202714E1,5[&rate=4.2709341303808607E-4]:1.327481085214E1)[&rate=3.267443624322006E-4]:1.688030205171E0,((7[&rate=2.8820325930562786E-4]:6.426396140429E0,6[&rate=5.84633455385783E-4]:6.426396140429E0)[&rate=6.154434763605601E-4]:2.047644163152E0,1[&rate=3.267443624322006E-4]:8.474040303581E0)[&rate=6.154434763605601E-4]:6.488800753725E0)[&rate=4.375062738212885E-4]:5.728074769363E1)[&rate=5.746233244211279E-4]:1.863530731389E0)[&rate=3.940892745915221E-4]:2.863560522828E0,(25[&rate=5.746233244211279E-4]:7.545450627256E1,((((33[&rate=8.238527819250804E-4]:5.847092397313E1,13[&rate=4.1642749394991984E-4]:5.847092397313E1)[&rate=6.478002461523801E-4]:5.185586080307E0,(11[&rate=4.5775528702109093E-4]:1.903425990287E1,29[&rate=4.968791538529423E-4]:1.903425990287E1)[&rate=7.606505257399739E-4]:4.462225015057E1)[&rate=0.001080448254495473]:2.504022924123E0,(19[&rate=5.647155477906082E-4]:1.168762330278E1,18[&rate=7.908151929521237E-4]:1.168762330278E1)[&rate=2.8820325930562786E-4]:5.447290967478E1)[&rate=4.968791538529423E-4]:7.121211554284E0,((10[&rate=5.947622299860868E-4]:1.721873299323E1,31[&rate=8.416879715239063E-4]:1.721873299323E1)[&rate=4.054503643779172E-4]:5.383801022516E1,23[&rate=4.968791538529423E-4]:7.105674321839E1)[&rate=3.565993256817649E-4]:2.225001313454E0)[&rate=6.26031688995276E-4]:2.172761740712E0)[&rate=8.416879715239063E-4]:1.51617373259E0)[&rate=5.25789489947982E-4]:2.776556770632E0,(17[&rate=7.195614917453526E-4]:7.240339017716E1,(27[&rate=9.776645644225662E-4]:1.851083432923E1,28[&rate=0.0014749735041676374]:1.851083432923E1)[&rate=6.705037937248048E-4]:5.389255584793E1)[&rate=5.548941494134532E-4]:7.343846598626E0)[&rate=0.0011791699055467945]:4.480952718093E1); +tree STATE_850000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55145.76743416705,EEF_ucld_branchRates=-266.168517335019,lnP=-55145.76743416705,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.284586511296035E-4]:8.988874526607E0,9[&rate=0.0010471110139599945]:8.988874526607E0)[&rate=5.908358205426717E-4]:7.928595389068E0,15[&rate=3.460062796952484E-4]:1.691746991568E1)[&rate=8.125679624771528E-4]:9.921611174144E1,(14[&rate=9.421785681549233E-4]:5.130690722185E1,24[&rate=0.0012070475179313683]:5.130690722185E1)[&rate=7.410352212910093E-4]:6.482667443527E1)[&rate=9.000792418668197E-4]:1.200611009043E1,((((((33[&rate=7.153337011779748E-4]:5.842881509979E1,13[&rate=3.627281830402541E-4]:5.842881509979E1)[&rate=6.337412372369671E-4]:1.071371659715E1,(11[&rate=5.180614876118372E-4]:2.034846120923E1,29[&rate=6.560099401022837E-4]:2.034846120923E1)[&rate=6.228379023599891E-4]:4.879407048771E1)[&rate=8.625345666663701E-4]:2.665594421781E0,(19[&rate=0.0010471110139599945]:1.51406130555E1,18[&rate=7.029600340048602E-4]:1.51406130555E1)[&rate=3.460062796952484E-4]:5.666751306321E1)[&rate=5.284586511296035E-4]:5.095848167399E0,((10[&rate=6.674139007013036E-4]:2.856364207015E1,31[&rate=5.284586511296035E-4]:2.856364207015E1)[&rate=4.8643511888398524E-4]:4.521779247635E1,23[&rate=5.388228102025428E-4]:7.378143454651E1)[&rate=6.908658097291864E-4]:3.122539739603E0)[&rate=5.908358205426717E-4]:3.079034066281E0,((12[&rate=6.790250871653466E-4]:7.763060079507E1,((((((2[&rate=4.5352658208501766E-4]:1.910014604064E0,4[&rate=8.125679624771528E-4]:1.910014604064E0)[&rate=3.2712355195446647E-4]:6.65789620126E-1,3[&rate=8.808114590305644E-4]:2.57580422419E0)[&rate=3.047968895958437E-4]:1.095785793515E1,5[&rate=3.2712355195446647E-4]:1.353366215934E1)[&rate=0.0011583937692474851]:1.783660033855E0,((7[&rate=4.6469975843316035E-4]:6.501123400863E0,1[&rate=4.054427798861477E-4]:6.501123400863E0)[&rate=4.5352658208501766E-4]:1.690132196315E0,6[&rate=7.824908990682705E-4]:8.191255597178E0)[&rate=6.120642048620072E-4]:7.126066596018E0)[&rate=4.054427798861477E-4]:5.838444479636E1,((30[&rate=9.653902776980304E-4]:5.40607752468E1,26[&rate=8.285040884213225E-4]:5.40607752468E1)[&rate=3.2712355195446647E-4]:1.426443361425E1,32[&rate=4.4208479377401443E-4]:6.832520886104E1)[&rate=6.560099401022837E-4]:5.376558128517E0)[&rate=8.808114590305644E-4]:2.444804418705E0,(16[&rate=4.1813155165534464E-4]:3.97711590757E1,((22[&rate=6.560099401022837E-4]:3.541575892245E0,21[&rate=5.595338598108015E-4]:3.541575892245E0)[&rate=7.029600340048602E-4]:4.183779224866E0,20[&rate=6.120642048620072E-4]:7.72535511711E0)[&rate=0.0015864841418225762]:3.204580395859E1)[&rate=9.000792418668197E-4]:3.637541233256E1)[&rate=0.001079881489430989]:1.484029386803E0)[&rate=0.0012070475179313683]:1.401657878161E0,25[&rate=8.625345666663701E-4]:7.903225867323E1)[&rate=3.627281830402541E-4]:9.50749679163E-1)[&rate=8.285040884213225E-4]:5.02117290093E0,(17[&rate=7.029600340048602E-4]:7.96764124044E1,(27[&rate=8.125679624771528E-4]:2.269779704707E1,28[&rate=0.0015864841418225762]:2.269779704707E1)[&rate=4.1813155165534464E-4]:5.697861535733E1)[&rate=6.228379023599891E-4]:5.327768848926E0)[&rate=0.0015864841418225762]:4.313551049422E1); +tree STATE_860000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55170.77524687989,EEF_ucld_branchRates=-266.168517335019,lnP=-55170.77524687989,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.181441473373404E-4]:8.643046945439E0,9[&rate=0.0011114573713762303]:8.643046945439E0)[&rate=7.879537406003574E-4]:6.830200412719E0,15[&rate=4.07653690060317E-4]:1.547324735816E1)[&rate=0.001040883435454918]:1.008894789071E2,(14[&rate=6.015544325699574E-4]:5.413104259968E1,24[&rate=8.723765234415095E-4]:5.413104259968E1)[&rate=8.195083886943869E-4]:6.223168366557E1)[&rate=0.001203480848777209]:8.3702895287E0,((((((33[&rate=6.80744152593466E-4]:5.217446565937E1,13[&rate=5.697402479751621E-4]:5.217446565937E1)[&rate=5.385087366455795E-4]:1.221147777036E1,(11[&rate=6.456916681311206E-4]:1.769990105312E1,29[&rate=4.757655363579858E-4]:1.769990105312E1)[&rate=8.363067470191372E-4]:4.668604237661E1)[&rate=0.0012629029060311117]:1.457233620033E0,(19[&rate=0.001040883435454918]:1.220930905836E1,18[&rate=0.001590966210042635]:1.220930905836E1)[&rate=3.359878034641279E-4]:5.36338679914E1)[&rate=3.950253703701702E-4]:7.174453643161E0,((10[&rate=8.363067470191372E-4]:2.595668151615E1,31[&rate=6.233178379414697E-4]:2.595668151615E1)[&rate=5.177738010246233E-4]:4.587191393958E1,23[&rate=6.57155720491178E-4]:7.182859545573E1)[&rate=5.488835383934112E-4]:1.189035237192E0)[&rate=3.950253703701702E-4]:1.683411940597E0,((12[&rate=8.723765234415095E-4]:7.161167195238E1,(((((3[&rate=8.034152436866808E-4]:2.446779982123E0,4[&rate=6.80744152593466E-4]:2.446779982123E0)[&rate=3.172750663084734E-4]:2.173816790411E-1,2[&rate=3.950253703701702E-4]:2.664161661164E0)[&rate=6.344190366544029E-4]:9.231061813347E0,5[&rate=5.177738010246233E-4]:1.189522347451E1)[&rate=5.177738010246233E-4]:1.898716759649E0,((7[&rate=4.3151472429608267E-4]:6.561734766604E0,1[&rate=3.172750663084734E-4]:6.561734766604E0)[&rate=6.929154389883743E-4]:1.120006636176E0,6[&rate=7.053725322463002E-4]:7.68174140278E0)[&rate=2.9517897289237685E-4]:6.11219883138E0)[&rate=3.5257725440083695E-4]:5.728669098157E1,((16[&rate=4.540677750036977E-4]:3.371623632415E1,((22[&rate=8.034152436866808E-4]:2.562328136128E0,21[&rate=5.908562716261161E-4]:2.562328136128E0)[&rate=3.359878034641279E-4]:4.682830450327E0,20[&rate=6.456916681311206E-4]:7.245158586456E0)[&rate=9.344859880937415E-4]:2.647107773769E1)[&rate=8.195083886943869E-4]:3.446424341676E1,((30[&rate=8.918678234536541E-4]:5.069620361515E1,26[&rate=4.540677750036977E-4]:5.069620361515E1)[&rate=6.123690561799942E-4]:1.118488133007E1,32[&rate=6.123690561799942E-4]:6.188108494522E1)[&rate=3.359878034641279E-4]:6.299394795687E0)[&rate=8.723765234415095E-4]:2.900151474817E0)[&rate=0.001590966210042635]:5.310407366502E-1)[&rate=3.172750663084734E-4]:2.215200017155E0,25[&rate=5.697402479751621E-4]:7.382687196953E1)[&rate=7.053725322463002E-4]:8.741706639868E-1)[&rate=8.538959373696803E-4]:6.142454825351E0,(17[&rate=9.833267545575365E-4]:7.125363573393E1,(27[&rate=7.053725322463002E-4]:2.093605283186E1,28[&rate=0.001203480848777209]:2.093605283186E1)[&rate=5.073736100997251E-4]:5.031758290206E1)[&rate=4.429222146975695E-4]:9.589861724944E0)[&rate=0.001590966210042635]:4.388951833508E1); +tree STATE_870000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55144.54150481558,EEF_ucld_branchRates=-266.168517335019,lnP=-55144.54150481558,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.108844231103969E-4]:7.955882687067E0,9[&rate=7.348718044447107E-4]:7.955882687067E0)[&rate=7.494268552672629E-4]:5.657522898089E0,15[&rate=7.803986358025438E-4]:1.361340558516E1)[&rate=7.969658964307591E-4]:1.003067745303E2,(14[&rate=0.001039896461485491]:4.792907794861E1,24[&rate=8.950853810921544E-4]:4.792907794861E1)[&rate=9.18970292372757E-4]:6.599110216682E1)[&rate=4.8101491702899206E-4]:8.2444271805E0,((((((33[&rate=8.327423379615736E-4]:5.557398785595E1,13[&rate=4.3155844893080406E-4]:5.557398785595E1)[&rate=5.904913645567397E-4]:9.642669307268E0,(11[&rate=2.4625055767745364E-4]:1.858762646732E1,29[&rate=4.3155844893080406E-4]:1.858762646732E1)[&rate=6.691886824036259E-4]:4.66290306959E1)[&rate=8.143761741214832E-4]:1.783851581137E0,(19[&rate=6.691886824036259E-4]:1.183730052356E1,18[&rate=7.803986358025438E-4]:1.183730052356E1)[&rate=2.934137251783608E-4]:5.51632082208E1)[&rate=2.934137251783608E-4]:7.649717365423E0,((10[&rate=5.697810568202703E-4]:2.803638106574E1,31[&rate=7.494268552672629E-4]:2.803638106574E1)[&rate=2.934137251783608E-4]:4.503702719086E1,23[&rate=6.454655406327056E-4]:7.30734082566E1)[&rate=5.904913645567397E-4]:1.576817853175E0)[&rate=3.6606049984949906E-4]:1.858445220136E0,(((12[&rate=8.143761741214832E-4]:6.964625469802E1,((30[&rate=7.969658964307591E-4]:4.907880463414E1,26[&rate=7.969658964307591E-4]:4.907880463414E1)[&rate=5.697810568202703E-4]:1.076849126568E1,32[&rate=4.002023144112605E-4]:5.984729589982E1)[&rate=5.004601287712626E-4]:9.798958798202E0)[&rate=4.8101491702899206E-4]:2.198775843852E0,(((((3[&rate=6.454655406327056E-4]:2.285714804425E0,4[&rate=5.495819752387034E-4]:2.285714804425E0)[&rate=4.416420555522912E-4]:3.375925370235E-1,2[&rate=3.108844231103969E-4]:2.623307341449E0)[&rate=0.0011268265720498088]:9.740736549966E0,5[&rate=3.6606049984949906E-4]:1.236404389141E1)[&rate=6.691886824036259E-4]:1.159316423671E0,((7[&rate=3.6606049984949906E-4]:7.820966364996E0,1[&rate=3.2638033838140073E-4]:7.820966364996E0)[&rate=6.340234452907275E-4]:1.263130797375E0,6[&rate=5.800637825216852E-4]:9.08409716237E0)[&rate=6.571782513638765E-4]:4.439263152715E0)[&rate=4.8101491702899206E-4]:5.826423059292E1,(16[&rate=5.297620622883042E-4]:3.779962479098E1,((22[&rate=0.0013481621073408816]:2.500003858253E0,21[&rate=6.118536497275481E-4]:2.500003858253E0)[&rate=2.934137251783608E-4]:4.849467472039E0,20[&rate=5.697810568202703E-4]:7.349471330292E0)[&rate=0.0011829928119369655]:3.045015346069E1)[&rate=0.0014934952487071801]:3.398796611703E1)[&rate=3.7787319673645604E-4]:5.743963386595E-2)[&rate=0.0010800447091355203]:2.76819223881E0,25[&rate=4.21317975242315E-4]:7.461322278069E1)[&rate=4.7126432698663015E-4]:1.895448549227E0)[&rate=5.396326928710295E-4]:3.70669900166E0,(17[&rate=6.010817097299917E-4]:7.110267934528E1,(27[&rate=5.101922380876828E-4]:2.324542241963E1,28[&rate=9.732736829684972E-4]:2.324542241963E1)[&rate=7.348718044447107E-4]:4.785725692565E1)[&rate=9.732736829684972E-4]:9.112690986297E0)[&rate=0.0018151640084546265]:4.194923696436E1); +tree STATE_880000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55157.80368613177,EEF_ucld_branchRates=-266.168517335019,lnP=-55157.80368613177,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.117182974010031E-4]:7.383011542234E0,9[&rate=0.0011104012474308879]:7.383011542234E0)[&rate=7.257358916776494E-4]:6.443260978966E0,15[&rate=2.658680798003727E-4]:1.38262725212E1)[&rate=4.15682302322828E-4]:1.03170832701E2,(14[&rate=0.0011104012474308879]:5.240223429657E1,24[&rate=7.887078956227078E-4]:5.240223429657E1)[&rate=9.793162499614867E-4]:6.459487092567E1)[&rate=5.354603777141023E-4]:1.269870438751E1,((((((33[&rate=7.556732536021662E-4]:5.609741844493E1,13[&rate=4.0606840718093913E-4]:5.609741844493E1)[&rate=3.5408450456804604E-4]:1.253920557694E1,(11[&rate=3.5408450456804604E-4]:1.838314327885E1,29[&rate=6.982464949994481E-4]:1.838314327885E1)[&rate=5.545056273430709E-4]:5.025348074302E1)[&rate=3.1663222400567286E-4]:1.642996624918E0,(19[&rate=3.6521334041135365E-4]:1.246936098496E1,18[&rate=7.556732536021662E-4]:1.246936098496E1)[&rate=4.802226915530229E-4]:5.781025966183E1)[&rate=5.545056273430709E-4]:5.676497148954E0,((10[&rate=3.019753552798212E-4]:2.581088973488E1,31[&rate=5.449257046076903E-4]:2.581088973488E1)[&rate=5.168120580563283E-4]:4.869721280062E1,23[&rate=4.802226915530229E-4]:7.45081025355E1)[&rate=2.854281020136761E-4]:1.448015260246E0)[&rate=2.854281020136761E-4]:4.335530790979E0,(((((((3[&rate=7.717539042060572E-4]:2.331176198389E0,4[&rate=4.5290467800543826E-4]:2.331176198389E0)[&rate=5.840955397205301E-4]:2.670083375337E-1,2[&rate=6.153385835184682E-4]:2.598184535922E0)[&rate=9.1813133336921E-4]:8.47549720254E0,5[&rate=6.262159165306775E-4]:1.107368173846E1)[&rate=6.982464949994481E-4]:2.183010863984E0,((7[&rate=3.019753552798212E-4]:7.015803277624E0,1[&rate=4.2514321595748617E-4]:7.015803277624E0)[&rate=5.075989532571396E-4]:7.577634835986E-1,6[&rate=5.354603777141023E-4]:7.773566761223E0)[&rate=6.373645778398758E-4]:5.483125841223E0)[&rate=4.802226915530229E-4]:5.943314540547E1,((30[&rate=5.840955397205301E-4]:5.123667143056E1,26[&rate=5.545056273430709E-4]:5.123667143056E1)[&rate=8.68181094431201E-4]:1.228111815729E1,32[&rate=4.15682302322828E-4]:6.351778958785E1)[&rate=3.299882593436986E-4]:9.172048420064E0)[&rate=4.620328345907906E-4]:3.028584999148E0,((16[&rate=2.658680798003727E-4]:3.536288475541E1,((22[&rate=5.642160621374303E-4]:2.965990172365E0,21[&rate=6.262159165306775E-4]:2.965990172365E0)[&rate=7.257358916776494E-4]:3.936571204618E0,20[&rate=2.854281020136761E-4]:6.902561376984E0)[&rate=0.001261203719708924]:2.846032337843E1)[&rate=7.403628787249424E-4]:3.969951318841E1,12[&rate=7.403628787249424E-4]:7.506239794382E1)[&rate=0.001261203719708924]:6.560250632391E-1)[&rate=6.373645778398758E-4]:2.487330119517E0,25[&rate=6.153385835184682E-4]:7.820575312658E1)[&rate=9.1813133336921E-4]:2.085895460143E0)[&rate=7.556732536021662E-4]:5.134637999888E0,(17[&rate=6.153385835184682E-4]:7.794101003836E1,(27[&rate=3.7589796854708236E-4]:2.247619665489E1,28[&rate=9.793162499614867E-4]:2.247619665489E1)[&rate=4.620328345907906E-4]:5.546481338347E1)[&rate=8.461871709151609E-4]:7.485276548251E0)[&rate=0.0016851881242011982]:4.426952302313E1); +tree STATE_890000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.606098843455,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.606098843455,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.918336287308795E-4]:8.478416193732E0,9[&rate=6.639279206747258E-4]:8.478416193732E0)[&rate=8.568924495181643E-4]:4.322871358967E0,15[&rate=6.028420142321957E-4]:1.28012875527E1)[&rate=8.171839914685901E-4]:1.027059985315E2,(14[&rate=0.0012518434347777]:5.161156317833E1,24[&rate=9.798010383990643E-4]:5.161156317833E1)[&rate=0.0010298204045832832]:6.389572290591E1)[&rate=3.764791629315091E-4]:9.909184582795E0,((((((33[&rate=7.931902660484254E-4]:5.99810205214E1,13[&rate=5.408553980551688E-4]:5.99810205214E1)[&rate=6.819382241949344E-4]:9.599088077016E0,(11[&rate=7.194677018811897E-4]:1.149131987741E1,29[&rate=8.568924495181643E-4]:1.149131987741E1)[&rate=6.462588680966214E-4]:5.808878872102E1)[&rate=4.44793041354612E-4]:1.160336512014E0,(19[&rate=5.767280971809501E-4]:1.376113875644E1,18[&rate=6.288185299355163E-4]:1.376113875644E1)[&rate=3.764791629315091E-4]:5.6979306354E1)[&rate=7.098556240374042E-4]:2.344605743065E0,((10[&rate=5.679144468930618E-4]:2.669893117301E1,31[&rate=4.153593321641355E-4]:2.669893117301E1)[&rate=5.941739184399428E-4]:4.557846763056E1,23[&rate=5.767280971809501E-4]:7.227739880357E1)[&rate=8.430797087493373E-4]:8.076520499289E-1)[&rate=9.384002540748842E-4]:4.579936885422E0,((12[&rate=8.298661374521401E-4]:7.530725677595E1,(((30[&rate=7.392633226221438E-4]:5.2879631128E1,26[&rate=3.764791629315091E-4]:5.2879631128E1)[&rate=6.375170443662108E-4]:1.304824673362E1,32[&rate=4.153593321641355E-4]:6.592787786163E1)[&rate=5.767280971809501E-4]:7.451037254396E0,((16[&rate=4.81008847690627E-4]:2.908838755594E1,((22[&rate=7.004082768833333E-4]:3.265696793873E0,21[&rate=5.408553980551688E-4]:3.265696793873E0)[&rate=6.639279206747258E-4]:3.797931351536E0,20[&rate=7.004082768833333E-4]:7.063628145408E0)[&rate=0.0010034835900562802]:2.202475941053E1)[&rate=8.171839914685901E-4]:4.244319416695E1,((((3[&rate=7.931902660484254E-4]:1.723851408008E0,4[&rate=0.0011346632468586867]:1.723851408008E0)[&rate=6.911080090910009E-4]:8.039436890888E-1,2[&rate=9.582365680495075E-4]:2.527795097097E0)[&rate=8.430797087493373E-4]:7.776369872838E0,5[&rate=4.81008847690627E-4]:1.030416496994E1)[&rate=7.292634449016973E-4]:2.278033156915E0,((7[&rate=4.153593321641355E-4]:7.372440745986E0,1[&rate=8.568924495181643E-4]:7.372440745986E0)[&rate=8.049753592624887E-4]:8.235312315438E-1,6[&rate=4.44793041354612E-4]:8.19597197753E0)[&rate=6.911080090910009E-4]:4.38622614932E0)[&rate=4.696568764218469E-4]:5.894938359604E1)[&rate=6.639279206747258E-4]:1.847333393132E0)[&rate=0.0010939088957497528]:1.928341659926E0)[&rate=8.298661374521401E-4]:8.357023619646E-1,25[&rate=6.114954201077676E-4]:7.614295913791E1)[&rate=5.315426239923827E-4]:1.522028601009E0)[&rate=5.315426239923827E-4]:1.8972803421E0,(17[&rate=9.199994915472741E-4]:6.969147751835E1,(27[&rate=6.550578534854667E-4]:2.489346528299E1,28[&rate=0.0011851024787387632]:2.489346528299E1)[&rate=7.292634449016973E-4]:4.479801223535E1)[&rate=3.976811937377634E-4]:9.870790562674E0)[&rate=0.001565624262773543]:4.585420258601E1); +tree STATE_900000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.440450455455,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.440450455455,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.9876777356994374E-4]:6.673335065518E0,9[&rate=7.177103300462284E-4]:6.673335065518E0)[&rate=8.468271760176716E-4]:4.675325963237E0,15[&rate=6.579384778710532E-4]:1.134866102875E1)[&rate=8.3042976377766E-4]:1.090407382358E2,(14[&rate=0.0013724596952645546]:4.692877444768E1,24[&rate=0.0010414157068002385]:4.692877444768E1)[&rate=9.877594155345715E-4]:7.34606248169E1)[&rate=8.146715735426241E-4]:5.744586598046E0,((((((33[&rate=8.639382931662171E-4]:5.745064349447E1,13[&rate=4.254113009507018E-4]:5.745064349447E1)[&rate=4.954096163865513E-4]:9.255510016514E0,(11[&rate=6.811797682650033E-4]:1.157944232543E1,29[&rate=4.3788898598514893E-4]:1.157944232543E1)[&rate=8.468271760176716E-4]:5.512671118556E1)[&rate=3.842815593803224E-4]:4.894147490619E0,(19[&rate=8.818497743199897E-4]:1.522865658275E1,18[&rate=6.579384778710532E-4]:1.522865658275E1)[&rate=3.515808227533738E-4]:5.637164441885E1)[&rate=0.00114358405584592]:2.487022005596E0,((10[&rate=3.515808227533738E-4]:2.191003609733E1,31[&rate=8.468271760176716E-4]:2.191003609733E1)[&rate=7.304296365936593E-4]:4.99810904381E1,23[&rate=5.385094866514385E-4]:7.189112653543E1)[&rate=0.00114358405584592]:2.196196471769E0)[&rate=3.842815593803224E-4]:2.650930963218E0,((12[&rate=8.818497743199897E-4]:7.277766870651E1,((((((3[&rate=3.322680217227513E-4]:1.678251071564E0,4[&rate=7.304296365936593E-4]:1.678251071564E0)[&rate=6.133757004470313E-4]:5.183968676446E-1,2[&rate=6.243236103704973E-4]:2.196647939209E0)[&rate=8.639382931662171E-4]:9.248735697713E0,5[&rate=6.353879117364672E-4]:1.144538363692E1)[&rate=4.843574792212399E-4]:8.59915648882E-1,((7[&rate=3.322680217227513E-4]:7.274416527613E0,1[&rate=3.0944259144528115E-4]:7.274416527613E0)[&rate=6.694627308166818E-4]:7.19836039727E-1,6[&rate=6.353879117364672E-4]:7.99425256734E0)[&rate=7.9948803879238E-4]:4.311046718465E0)[&rate=4.954096163865513E-4]:5.683885151356E1,((30[&rate=5.597647968207942E-4]:4.878842654532E1,26[&rate=6.93111108678976E-4]:4.878842654532E1)[&rate=7.052797320140023E-4]:1.478226345315E1,32[&rate=5.491427303439718E-4]:6.357068999847E1)[&rate=3.0944259144528115E-4]:5.573460800892E0)[&rate=3.0944259144528115E-4]:1.2229872686E0,(16[&rate=5.385094866514385E-4]:2.865453411183E1,((22[&rate=6.93111108678976E-4]:3.489599858561E0,21[&rate=0.001297068663382857]:3.489599858561E0)[&rate=4.954096163865513E-4]:2.967478856669E0,20[&rate=9.006633820679389E-4]:6.45707871523E0)[&rate=0.0019705584790817954]:2.21974553966E1)[&rate=0.00114358405584592]:4.171260395613E1)[&rate=5.810540951006513E-4]:2.410530638553E0)[&rate=5.278437956124108E-4]:1.735053239274E0,25[&rate=6.811797682650033E-4]:7.451272194579E1)[&rate=0.0010134987853753692]:2.225532024632E0)[&rate=6.133757004470313E-4]:5.0254783595E0,(17[&rate=9.006633820679389E-4]:7.641317159754E1,(27[&rate=7.568538055876782E-4]:2.559357579409E1,28[&rate=0.001297068663382857]:2.559357579409E1)[&rate=5.385094866514385E-4]:5.081959580345E1)[&rate=4.254113009507018E-4]:5.350560732381E0)[&rate=0.0014736965125254978]:4.437025353271E1); +tree STATE_910000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55121.9401125964,EEF_ucld_branchRates=-266.168517335019,lnP=-55121.9401125964,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.390036884662745E-4]:8.569827855552E0,9[&rate=7.148944740861485E-4]:8.569827855552E0)[&rate=4.111919487725629E-4]:5.336238860854E0,15[&rate=8.415160265552725E-4]:1.390606671641E1)[&rate=6.885708657971076E-4]:1.076562283553E2,(14[&rate=0.0010935024897558156]:4.44758725026E1,24[&rate=7.938532807515849E-4]:4.44758725026E1)[&rate=9.98941207085299E-4]:7.70864225691E1)[&rate=6.467921533664746E-4]:7.891283140837E0,((((((33[&rate=8.288545851635866E-4]:5.638492094622E1,13[&rate=5.816301159805759E-4]:5.638492094622E1)[&rate=7.059804355164878E-4]:1.277382900037E1,(11[&rate=7.239706214440401E-4]:1.375568193973E1,29[&rate=8.050795589021622E-4]:1.375568193973E1)[&rate=8.415160265552725E-4]:5.540306800687E1)[&rate=8.050795589021622E-4]:2.078856011333E0,(19[&rate=3.907034858927431E-4]:1.629216678805E1,18[&rate=9.750878972317062E-4]:1.629216678805E1)[&rate=4.8022185338086E-4]:5.494543916988E1)[&rate=6.800440455403049E-4]:3.74144215303E0,((10[&rate=5.478082941919665E-4]:2.556548599373E1,31[&rate=5.980270197984777E-4]:2.556548599373E1)[&rate=4.282189767326637E-4]:4.678817562986E1,23[&rate=5.564463449789085E-4]:7.235366162359E1)[&rate=7.52366084311699E-4]:2.62538648737E0)[&rate=6.6327407058424E-4]:2.349951736231E0,((12[&rate=5.816301159805759E-4]:7.44228011961E1,((((((3[&rate=8.167293393070538E-4]:2.592413994882E0,4[&rate=4.111919487725629E-4]:2.592413994882E0)[&rate=7.938532807515849E-4]:2.100055829489E-1,2[&rate=5.64946524516647E-4]:2.802419577831E0)[&rate=0.0011387832826387782]:8.071258714626E0,5[&rate=4.910415268946466E-4]:1.087367829246E1)[&rate=7.059804355164878E-4]:8.787905250732E-1,((7[&rate=3.907034858927431E-4]:7.075170396849E0,1[&rate=6.142751389141861E-4]:7.075170396849E0)[&rate=8.288545851635866E-4]:4.974720350764E-1,6[&rate=0.0010568175604813673]:7.572642431925E0)[&rate=5.478082941919665E-4]:4.179826385605E0)[&rate=7.059804355164878E-4]:5.768785235264E1,((30[&rate=8.288545851635866E-4]:4.974078530311E1,26[&rate=6.972112682849033E-4]:4.974078530311E1)[&rate=6.142751389141861E-4]:1.004351171893E1,32[&rate=3.907034858927431E-4]:5.978429702204E1)[&rate=0.0010568175604813673]:9.65602414813E0)[&rate=4.111919487725629E-4]:3.335888055971E0,(16[&rate=5.816301159805759E-4]:3.231957233018E1,((22[&rate=6.550036882246595E-4]:2.864163877644E0,21[&rate=9.98941207085299E-4]:2.864163877644E0)[&rate=4.910415268946466E-4]:5.674572573211E0,20[&rate=6.467921533664746E-4]:8.538736450855E0)[&rate=0.001287743773141506]:2.378083587933E1)[&rate=7.938532807515849E-4]:4.045663689596E1)[&rate=6.885708657971076E-4]:1.646591969959E0)[&rate=4.5646187356434854E-4]:1.041112882466E0,25[&rate=6.304939004203264E-4]:7.546391407857E1)[&rate=4.282189767326637E-4]:1.865085768624E0)[&rate=8.991923453072178E-4]:6.919867862833E0,(17[&rate=7.72497460384424E-4]:7.647165777472E1,(27[&rate=5.112222246349429E-4]:2.470082187864E1,28[&rate=9.159588426583621E-4]:2.470082187864E1)[&rate=6.467921533664746E-4]:5.177083589608E1)[&rate=6.6327407058424E-4]:7.777209935308E0)[&rate=0.001287743773141506]:4.520471050251E1); +tree STATE_920000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55138.73091840194,EEF_ucld_branchRates=-266.168517335019,lnP=-55138.73091840194,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.7450260217809853E-4]:9.758990763836E0,9[&rate=8.681661513479866E-4]:9.758990763836E0)[&rate=7.326557713541129E-4]:3.971628689291E0,15[&rate=7.71927755651183E-4]:1.373061945313E1)[&rate=5.484008880313274E-4]:1.120077580699E2,(14[&rate=0.0011367165427388286]:4.417582660231E1,24[&rate=7.71927755651183E-4]:4.417582660231E1)[&rate=8.008512529338983E-4]:8.156255092075E1)[&rate=0.0010139256842646987]:3.372958687833E0,((((((33[&rate=6.042605701444062E-4]:5.749360030783E1,13[&rate=4.839789268525269E-4]:5.749360030783E1)[&rate=8.008512529338983E-4]:1.047231907663E1,(11[&rate=7.204465772305116E-4]:1.197767132221E1,29[&rate=6.642981591845761E-4]:1.197767132221E1)[&rate=9.834220831149044E-4]:5.598824806224E1)[&rate=7.452746501629339E-4]:1.759287136238E0,(19[&rate=6.749754801042555E-4]:1.48452643811E1,18[&rate=7.452746501629339E-4]:1.48452643811E1)[&rate=4.550897798985689E-4]:5.487994213959E1)[&rate=5.575633872025565E-4]:2.360736920615E0,((10[&rate=5.853450301206756E-4]:2.512590200615E1,31[&rate=5.667649452417657E-4]:2.512590200615E1)[&rate=3.475743757369768E-4]:4.661119623697E1,23[&rate=3.095428191654753E-4]:7.173709824312E1)[&rate=6.435982461406834E-4]:3.48845198187E-1)[&rate=7.452746501629339E-4]:2.991625771889E0,((12[&rate=8.326477893245556E-4]:7.195987990453E1,((16[&rate=3.095428191654753E-4]:3.257980462917E1,((22[&rate=6.335338797590408E-4]:3.361345512915E0,21[&rate=3.475743757369768E-4]:3.361345512915E0)[&rate=0.0010139256842646987]:4.111378203965E0,20[&rate=3.095428191654753E-4]:7.472723716879E0)[&rate=0.001397660788597717]:2.510708091229E1)[&rate=6.538463077905668E-4]:3.849586934178E1,(((((3[&rate=5.947533306690461E-4]:1.864032259439E0,4[&rate=8.163445158692451E-4]:1.864032259439E0)[&rate=9.313522180765763E-4]:3.227379284328E-1,2[&rate=5.853450301206756E-4]:2.186770187872E0)[&rate=8.008512529338983E-4]:7.991680764781E0,5[&rate=6.538463077905668E-4]:1.017845095265E1)[&rate=0.0011367165427388286]:1.718607428316E0,((7[&rate=3.301992379886347E-4]:7.100085491964E0,1[&rate=3.628929545808831E-4]:7.100085491964E0)[&rate=4.2421495870626467E-4]:3.717261840496E-1,6[&rate=5.209922700640203E-4]:7.471811676014E0)[&rate=4.7450260217809853E-4]:4.425246704955E0)[&rate=5.667649452417657E-4]:5.77602406159E1,((30[&rate=5.209922700640203E-4]:4.963986041521E1,26[&rate=5.118270976006683E-4]:4.963986041521E1)[&rate=8.008512529338983E-4]:7.959875249657E0,32[&rate=4.017537835645486E-4]:5.759973566487E1)[&rate=4.839789268525269E-4]:1.2057563332E1)[&rate=4.017537835645486E-4]:1.418374974074E0)[&rate=4.3480801714783167E-4]:8.842059335864E-1)[&rate=3.301992379886347E-4]:2.495409539813E0,25[&rate=5.118270976006683E-4]:7.445528944434E1)[&rate=6.236344343298788E-4]:6.222797688528E-1)[&rate=3.475743757369768E-4]:2.523623605777E0,(17[&rate=6.538463077905668E-4]:6.983273986816E1,(27[&rate=6.236344343298788E-4]:2.386340283346E1,28[&rate=0.0010887330209776304]:2.386340283346E1)[&rate=6.042605701444062E-4]:4.59693370347E1)[&rate=0.0010887330209776304]:7.768452950812E0)[&rate=0.001397660788597717]:5.151014339191E1); +tree STATE_930000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.36925630346,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.36925630346,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=9.900943521228376E-4]:8.566569890503E0,9[&rate=5.433135397518505E-4]:8.566569890503E0)[&rate=6.804273413900265E-4]:6.277086816739E0,15[&rate=8.059067146432804E-4]:1.484365670724E1)[&rate=6.609779198317763E-4]:1.065965781742E2,(14[&rate=0.001367613207454145]:4.447686965261E1,24[&rate=0.0010501998779511644]:4.447686965261E1)[&rate=7.797491117500977E-4]:7.696336522878E1)[&rate=9.011638420358655E-4]:7.722728001715E0,((((((11[&rate=6.804273413900265E-4]:1.60379217911E1,29[&rate=4.463243318232039E-4]:1.60379217911E1)[&rate=9.207092330446259E-4]:5.924781772252E1,(33[&rate=8.059067146432804E-4]:6.201301344728E1,13[&rate=5.160874072124125E-4]:6.201301344728E1)[&rate=6.804273413900265E-4]:1.327272606634E1)[&rate=3.961065471325046E-4]:1.332560350732E0,(19[&rate=5.522474308271677E-4]:1.521033395577E1,18[&rate=7.006069132855943E-4]:1.521033395577E1)[&rate=3.148656661888777E-4]:6.140796590858E1)[&rate=6.14630594543138E-4]:9.790055382911E-1,((10[&rate=6.32858818950554E-4]:2.54283375525E1,31[&rate=6.514808297429242E-4]:2.54283375525E1)[&rate=3.8071465665445E-4]:5.179574533359E1,23[&rate=4.97345945695808E-4]:7.722408288609E1)[&rate=3.422568930152044E-4]:3.73222516552E-1)[&rate=5.433135397518505E-4]:1.873574258086E0,((12[&rate=8.343827763201443E-4]:7.668684498019E1,((16[&rate=7.925707941135308E-4]:3.370850759852E1,((22[&rate=7.554393576225315E-4]:3.212377496058E0,21[&rate=3.422568930152044E-4]:3.212377496058E0)[&rate=7.797491117500977E-4]:5.168235457732E0,20[&rate=3.6318951828364396E-4]:8.38061295379E0)[&rate=0.0011310687312062126]:2.532789464473E1)[&rate=7.925707941135308E-4]:4.040566103098E1,(((((3[&rate=0.0011856466719875327]:1.974868242742E0,4[&rate=6.237029088792836E-4]:1.974868242742E0)[&rate=8.198195682898914E-4]:6.539422188376E-1,2[&rate=5.252551418746944E-4]:2.628810461579E0)[&rate=8.496832031819567E-4]:7.567091998284E0,5[&rate=4.349226341211698E-4]:1.019590245986E1)[&rate=3.422568930152044E-4]:2.141161238837E0,((7[&rate=6.904159617076632E-4]:7.887989837536E0,1[&rate=3.8071465665445E-4]:7.887989837536E0)[&rate=7.554393576225315E-4]:1.057910877061E0,6[&rate=6.609779198317763E-4]:8.945900714597E0)[&rate=6.32858818950554E-4]:3.391162984103E0)[&rate=5.522474308271677E-4]:5.901318766983E1,((30[&rate=4.97345945695808E-4]:5.275632021792E1,26[&rate=5.877712449039174E-4]:5.275632021792E1)[&rate=6.804273413900265E-4]:8.545341977115E0,32[&rate=4.463243318232039E-4]:6.130166219503E1)[&rate=6.32858818950554E-4]:1.00485891735E1)[&rate=5.160874072124125E-4]:2.763917260968E0)[&rate=0.001018280354246158]:2.572676350692E0)[&rate=3.8071465665445E-4]:1.740312684115E0,25[&rate=0.001018280354246158]:7.84271576643E1)[&rate=5.788893631092454E-4]:1.043721996425E0)[&rate=5.877712449039174E-4]:5.066679650943E0,(17[&rate=7.925707941135308E-4]:7.479240481834E1,(27[&rate=5.067941110771175E-4]:2.621071082587E1,28[&rate=0.0010871177130776118]:2.621071082587E1)[&rate=8.198195682898914E-4]:4.858169399248E1)[&rate=5.700185452462508E-4]:9.745154493328E0)[&rate=0.0012581614934330278]:4.462540357144E1); +tree STATE_940000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55130.69285590193,EEF_ucld_branchRates=-266.168517335019,lnP=-55130.69285590193,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.5403993973752294E-4]:8.228130312379E0,9[&rate=9.324151050805441E-4]:8.228130312379E0)[&rate=8.538412251084788E-4]:5.867972053956E0,15[&rate=6.91041612774984E-4]:1.409610236633E1)[&rate=8.209900570592679E-4]:1.072846224084E2,(14[&rate=0.0011187441861725091]:5.249559668249E1,24[&rate=0.001041305841585183]:5.249559668249E1)[&rate=0.001009741820553941]:6.888512809227E1)[&rate=7.9111590436256E-4]:4.104152641619E0,((((((33[&rate=6.586768935045845E-4]:5.997733916161E1,13[&rate=5.038713446560019E-4]:5.997733916161E1)[&rate=3.15020688220481E-4]:1.364449380994E1,(11[&rate=5.228985559745224E-4]:1.781153464347E1,29[&rate=5.699983939688109E-4]:1.781153464347E1)[&rate=6.083190837641429E-4]:5.581029832809E1)[&rate=5.038713446560019E-4]:1.440454733136E0,(19[&rate=5.511478591510383E-4]:1.439536242552E1,18[&rate=4.645149766217972E-4]:1.439536242552E1)[&rate=4.745896393828604E-4]:6.066692527918E1)[&rate=5.605602745658488E-4]:8.085435537404E-1,((10[&rate=5.228985559745224E-4]:2.440997531272E1,31[&rate=5.228985559745224E-4]:2.440997531272E1)[&rate=3.15020688220481E-4]:4.96067423559E1,23[&rate=3.9726403855559365E-4]:7.401671766862E1)[&rate=7.9111590436256E-4]:1.85411358981E0)[&rate=7.505669433913136E-4]:2.111739346237E0,((((16[&rate=4.844851148374859E-4]:3.461565537247E1,((22[&rate=0.0017128957728306123]:2.357836730859E0,21[&rate=3.697658223502696E-4]:2.357836730859E0)[&rate=5.417449153749616E-4]:4.768302148449E0,20[&rate=9.107322465752494E-4]:7.126138879308E0)[&rate=0.0011684369969849982]:2.748951649316E1)[&rate=0.001041305841585183]:3.547816471023E1,12[&rate=6.181183859841164E-4]:7.00938200827E1)[&rate=8.209900570592679E-4]:2.879821950631E0,(((((3[&rate=3.362092675327412E-4]:2.190331780748E0,4[&rate=7.9111590436256E-4]:2.190331780748E0)[&rate=3.8404336460869944E-4]:4.911683977007E-1,2[&rate=3.15020688220481E-4]:2.681500178449E0)[&rate=7.9111590436256E-4]:6.006376001681E0,5[&rate=4.94235785660238E-4]:8.687876180129E0)[&rate=7.9111590436256E-4]:1.814816871749E0,((7[&rate=6.586768935045845E-4]:6.882185884423E0,6[&rate=4.2147420194382226E-4]:6.882185884423E0)[&rate=4.94235785660238E-4]:1.633879559207E0,1[&rate=6.800269382310719E-4]:8.51606544363E0)[&rate=0.001041305841585183]:1.986627608248E0)[&rate=3.15020688220481E-4]:6.084886410916E1,((30[&rate=6.692461725451588E-4]:5.369096818622E1,26[&rate=7.02314569675468E-4]:5.369096818622E1)[&rate=8.057245366889517E-4]:9.130091699067E0,32[&rate=2.8748421213996745E-4]:6.282105988528E1)[&rate=6.692461725451588E-4]:8.53049727575E0)[&rate=7.770929455169965E-4]:1.622084872296E0)[&rate=4.2147420194382226E-4]:3.502665860666E0,25[&rate=6.380910586282204E-4]:7.6476307894E1)[&rate=6.181183859841164E-4]:1.506262710675E0)[&rate=8.538412251084788E-4]:3.643872522829E0,(17[&rate=6.28036854000833E-4]:7.30657250492E1,(27[&rate=6.586768935045845E-4]:2.605595479346E1,28[&rate=0.0013131625301705061]:2.605595479346E1)[&rate=7.505669433913136E-4]:4.700977025574E1)[&rate=5.890143560467712E-4]:8.560718078296E0)[&rate=0.0013131625301705061]:4.385843428887E1); +tree STATE_950000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.727454768545,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.727454768545,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.565387345008174E-4]:8.095261951754E0,9[&rate=0.0020761272207486634]:8.095261951754E0)[&rate=8.974064807418605E-4]:5.38957803014E0,15[&rate=4.087451471246129E-4]:1.348483998189E1)[&rate=6.80232642651083E-4]:1.0179428265E2,(14[&rate=0.0012394120327276351]:4.502012081775E1,24[&rate=9.794239443454064E-4]:4.502012081775E1)[&rate=0.0011176268948102466]:7.025900181416E1)[&rate=3.3951471514524165E-4]:7.313059721239E0,((((((33[&rate=6.106957905389321E-4]:5.681548913868E1,13[&rate=5.097035470267665E-4]:5.681548913868E1)[&rate=9.163351332549776E-4]:1.098355631626E1,(11[&rate=5.436660972299875E-4]:1.823147338128E1,29[&rate=5.548423344535778E-4]:1.823147338128E1)[&rate=7.172391449965775E-4]:4.956757207366E1)[&rate=3.936459112310721E-4]:9.609414166686E-1,(19[&rate=5.548423344535778E-4]:1.425110571161E1,18[&rate=8.79329944234177E-4]:1.425110571161E1)[&rate=4.981392193141693E-4]:5.450888116E1)[&rate=5.324356355089859E-4]:2.888490683775E0,((10[&rate=3.158047300469646E-4]:2.260064059613E1,31[&rate=7.431402510746801E-4]:2.260064059613E1)[&rate=3.3951471514524165E-4]:4.797669208578E1,23[&rate=7.300498368021334E-4]:7.057733268191E1)[&rate=7.172391449965775E-4]:1.071144873473E0)[&rate=6.682961277697795E-4]:1.455913871998E0,((12[&rate=8.79329944234177E-4]:6.875987826605E1,((16[&rate=3.158047300469646E-4]:2.87051588145E1,((22[&rate=0.001193627575632314]:2.453125231709E0,21[&rate=8.79329944234177E-4]:2.453125231709E0)[&rate=9.163351332549776E-4]:3.965975967039E0,20[&rate=8.293530212295146E-4]:6.419101198748E0)[&rate=0.0013567638882743948]:2.228605761576E1)[&rate=9.163351332549776E-4]:3.933680399551E1,(((30[&rate=5.211245841099812E-4]:5.041209427267E1,26[&rate=5.211245841099812E-4]:5.041209427267E1)[&rate=8.620132716269078E-4]:5.97089199802E0,32[&rate=3.158047300469646E-4]:5.638298627069E1)[&rate=4.229794115111491E-4]:7.774723505272E0,((((2[&rate=6.80232642651083E-4]:1.161920369672E0,4[&rate=0.0010556552688857452]:1.161920369672E0)[&rate=5.211245841099812E-4]:1.180375639585E0,3[&rate=9.794239443454064E-4]:2.342296009258E0)[&rate=8.974064807418605E-4]:7.316756904331E0,5[&rate=3.158047300469646E-4]:9.659052913589E0)[&rate=5.659883612847565E-4]:1.456063425613E0,((7[&rate=8.453771952631063E-4]:5.835932601117E0,6[&rate=6.448968926035843E-4]:5.835932601117E0)[&rate=0.001193627575632314]:1.847735793811E0,1[&rate=4.087451471246129E-4]:7.683668394928E0)[&rate=6.565240926033435E-4]:3.431447944273E0)[&rate=6.682961277697795E-4]:5.304259343676E1)[&rate=5.882772070818888E-4]:3.884253034054E0)[&rate=0.0015449087128659208]:7.179154560298E-1)[&rate=7.172391449965775E-4]:1.214675986695E0,25[&rate=7.565387345008174E-4]:6.997455425274E1)[&rate=6.106957905389321E-4]:3.129837174638E0)[&rate=4.863932278589192E-4]:5.170562193253E0,(17[&rate=0.0010283902386889695]:6.714130517087E1,(27[&rate=3.158047300469646E-4]:2.080957971762E1,28[&rate=0.0015449087128659208]:2.080957971762E1)[&rate=7.172391449965775E-4]:4.633172545325E1)[&rate=4.4956812243790716E-4]:1.113364844977E1)[&rate=0.001193627575632314]:4.431722873252E1); +tree STATE_960000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55144.21666484796,EEF_ucld_branchRates=-266.168517335019,lnP=-55144.21666484796,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.4183980046617747E-4]:6.125486394803E0,9[&rate=9.131902494333585E-4]:6.125486394803E0)[&rate=6.01486297738052E-4]:7.720865426137E0,15[&rate=6.923058710778308E-4]:1.384635182094E1)[&rate=7.040646894152582E-4]:9.699638874476E1,(14[&rate=0.0011809924318088416]:5.28382160693E1,24[&rate=5.902549793767996E-4]:5.28382160693E1)[&rate=0.0015577931878984045]:5.800452449639E1)[&rate=5.56206261350367E-4]:1.297934129317E1,((((((33[&rate=0.0012642352182542522]:5.850859041902E1,13[&rate=3.142124815188378E-4]:5.850859041902E1)[&rate=8.639291079788636E-4]:8.559221515654E0,(11[&rate=4.8355421211935065E-4]:1.78645237658E1,29[&rate=8.05496906546125E-4]:1.78645237658E1)[&rate=7.040646894152582E-4]:4.920328816888E1)[&rate=7.785794030710799E-4]:1.807759148378E0,(19[&rate=9.309714041271513E-4]:1.525259613392E1,18[&rate=0.0010114190309652754]:1.525259613392E1)[&rate=3.4601197131537E-4]:5.362297494913E1)[&rate=9.495706859647326E-4]:3.964084210512E0,((10[&rate=7.528388250581917E-4]:2.091742546475E1,31[&rate=7.785794030710799E-4]:2.091742546475E1)[&rate=3.705838896608609E-4]:5.141244273715E1,23[&rate=5.902549793767996E-4]:7.23298682019E1)[&rate=6.01486297738052E-4]:5.097870916673E-1)[&rate=9.131902494333585E-4]:1.189146194892E0,((12[&rate=9.69092096406379E-4]:7.063260238383E1,((16[&rate=4.2635664950917336E-4]:2.869712807607E1,((22[&rate=7.040646894152582E-4]:2.042739263901E0,21[&rate=3.4601197131537E-4]:2.042739263901E0)[&rate=7.528388250581917E-4]:4.203002750927E0,20[&rate=5.676408294962896E-4]:6.245742014828E0)[&rate=0.0020613282411157197]:2.245138606124E1)[&rate=8.797402600191041E-4]:3.927871727464E1,(((((2[&rate=7.528388250581917E-4]:1.201599572204E0,4[&rate=0.0011809924318088416]:1.201599572204E0)[&rate=9.495706859647326E-4]:7.134931692749E-1,3[&rate=0.0015577931878984045]:1.915092741479E0)[&rate=9.495706859647326E-4]:8.518486609643E0,5[&rate=3.4601197131537E-4]:1.043357935112E1)[&rate=9.89658935875657E-4]:1.891607716359E0,((7[&rate=9.309714041271513E-4]:7.846009382271E0,6[&rate=3.705838896608609E-4]:7.846009382271E0)[&rate=9.89658935875657E-4]:8.565874396046E-1,1[&rate=7.528388250581917E-4]:8.702596821875E0)[&rate=4.564085910532133E-4]:3.622590245606E0)[&rate=6.464219420632956E-4]:5.474957474696E1,((30[&rate=6.577573780871455E-4]:5.196703522333E1,26[&rate=7.280621810046986E-4]:5.196703522333E1)[&rate=0.0010858749784335973]:9.406192029039E0,32[&rate=5.210131282162503E-4]:6.137322725236E1)[&rate=3.4601197131537E-4]:5.701534562075E0)[&rate=0.0015577931878984045]:9.010835362718E-1)[&rate=0.0012642352182542522]:2.65675703312E0)[&rate=5.56206261350367E-4]:2.1646069597E0,25[&rate=5.56206261350367E-4]:7.279720934353E1)[&rate=6.239112525186138E-4]:1.231592144931E0)[&rate=5.676408294962896E-4]:2.711726132367E0,(17[&rate=7.655760897397736E-4]:6.703769919652E1,(27[&rate=7.280621810046986E-4]:2.328388518247E1,28[&rate=9.495706859647326E-4]:2.328388518247E1)[&rate=4.564085910532133E-4]:4.375381401406E1)[&rate=5.210131282162503E-4]:9.702828424308E0)[&rate=0.0013157361928250715]:4.708155423804E1); +tree STATE_970000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55154.515035210075,EEF_ucld_branchRates=-266.168517335019,lnP=-55154.515035210075,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.6589707023059246E-4]:9.0872619867E0,9[&rate=5.364223393560873E-4]:9.0872619867E0)[&rate=6.581161829010711E-4]:4.870364343127E0,15[&rate=6.001912022882079E-4]:1.395762632983E1)[&rate=5.572074754252509E-4]:9.739215079023E1,(14[&rate=0.0010403629654011238]:4.664559059434E1,24[&rate=6.342408212006567E-4]:4.664559059434E1)[&rate=0.0014104897940793338]:6.470418652572E1)[&rate=5.892246828062797E-4]:1.843280254803E1,((((((19[&rate=4.955808312364502E-4]:1.455327889749E1,18[&rate=8.773955810916141E-4]:1.455327889749E1)[&rate=3.6589707023059246E-4]:5.673110566261E1,(11[&rate=5.05743561467904E-4]:1.875814735984E1,29[&rate=4.854191268531925E-4]:1.875814735984E1)[&rate=0.0010403629654011238]:5.252623720025E1)[&rate=2.698819676785777E-4]:4.029933831882E-1,(33[&rate=8.994773048365594E-4]:6.072623452952E1,13[&rate=2.698819676785777E-4]:6.072623452952E1)[&rate=4.2320774406403927E-4]:1.096114341376E1)[&rate=7.681204296520909E-4]:3.612995832506E0,((10[&rate=5.784172626460162E-4]:2.047728117534E1,31[&rate=4.854191268531925E-4]:2.047728117534E1)[&rate=4.752384124334228E-4]:5.334236257538E1,23[&rate=5.892246828062797E-4]:7.381964375072E1)[&rate=2.698819676785777E-4]:1.480730025066E0)[&rate=8.186059777909805E-4]:1.417635964988E0,((12[&rate=7.378299173180694E-4]:7.401520776112E1,(((((2[&rate=4.338587624786942E-4]:1.864262413142E0,4[&rate=8.186059777909805E-4]:1.864262413142E0)[&rate=4.5473147019727786E-4]:5.674842425133E-1,3[&rate=6.113358384298133E-4]:2.431746655655E0)[&rate=7.378299173180694E-4]:9.106502639456E0,5[&rate=4.5473147019727786E-4]:1.153824929511E1)[&rate=8.186059777909805E-4]:1.060087699058E0,((7[&rate=3.089733306653309E-4]:7.544064889519E0,6[&rate=6.226786278298425E-4]:7.544064889519E0)[&rate=3.249268411399915E-4]:1.167498116914E0,1[&rate=2.698819676785777E-4]:8.711563006433E0)[&rate=7.681204296520909E-4]:3.886773987735E0)[&rate=3.6589707023059246E-4]:6.033013274983E1,(((30[&rate=8.371220950499353E-4]:5.578085235416E1,26[&rate=7.842001683872851E-4]:5.578085235416E1)[&rate=0.0011715429838948775]:6.670980003961E0,32[&rate=3.089733306653309E-4]:6.245183235812E1)[&rate=2.427479518955201E-4]:8.967948199312E0,(16[&rate=6.342408212006567E-4]:3.045805756457E1,((22[&rate=0.0011212389528720515]:2.147339326037E0,21[&rate=6.581161829010711E-4]:2.147339326037E0)[&rate=6.7048044543632E-4]:3.776378938581E0,20[&rate=4.012743933811985E-4]:5.923718264618E0)[&rate=0.0019189601608913052]:2.453433929995E1)[&rate=9.231344571198702E-4]:4.096172299286E1)[&rate=6.7048044543632E-4]:1.508689186568E0)[&rate=5.05743561467904E-4]:1.086738017119E0)[&rate=6.342408212006567E-4]:1.530584162235E0,25[&rate=7.842001683872851E-4]:7.554579192336E1)[&rate=0.0014104897940793338]:1.17221781742E0)[&rate=4.6501707945489755E-4]:2.477948035318E0,(17[&rate=0.0011715429838948775]:6.889849475946E1,(27[&rate=4.5473147019727786E-4]:2.847091508902E1,28[&rate=8.009995637084802E-4]:2.847091508902E1)[&rate=8.566698346578898E-4]:4.042757967044E1)[&rate=6.113358384298133E-4]:1.029746301663E1)[&rate=0.0014104897940793338]:5.0586621892E1); +tree STATE_980000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55152.41626247657,EEF_ucld_branchRates=-266.168517335019,lnP=-55152.41626247657,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.038194508457271E-4]:8.321635391608E0,9[&rate=8.16050174715858E-4]:8.321635391608E0)[&rate=4.3571695259247425E-4]:6.537486557666E0,15[&rate=7.400128759257029E-4]:1.485912194927E1)[&rate=6.540304728479668E-4]:9.627615100874E1,(14[&rate=9.966751129556293E-4]:4.644765360222E1,24[&rate=8.335636100482496E-4]:4.644765360222E1)[&rate=0.0011644224560402705]:6.46876193558E1)[&rate=0.0013187217632804934]:1.512771615887E1,((25[&rate=5.709392431926823E-4]:7.603686450005E1,(((((33[&rate=7.994307819304341E-4]:6.108709799894E1,13[&rate=3.416859892993394E-4]:6.108709799894E1)[&rate=4.2543439506494694E-4]:9.283510000413E0,(11[&rate=4.2543439506494694E-4]:2.035125705171E1,29[&rate=6.321712974769474E-4]:2.035125705171E1)[&rate=7.994307819304341E-4]:5.001935094764E1)[&rate=5.418924670941285E-4]:1.243130119386E0,(19[&rate=8.16050174715858E-4]:1.047159865577E1,18[&rate=4.847632375680483E-4]:1.047159865577E1)[&rate=5.133160106078826E-4]:6.114213946297E1)[&rate=2.612990363077308E-4]:2.036359305974E0,((10[&rate=9.966751129556293E-4]:2.039608468915E1,31[&rate=7.265664834922353E-4]:2.039608468915E1)[&rate=3.0874329721526254E-4]:5.277651629742E1,23[&rate=6.321712974769474E-4]:7.317260098657E1)[&rate=5.038194508457271E-4]:4.774964381349E-1)[&rate=3.2622220165729154E-4]:2.347438389872E0,((((((2[&rate=7.400128759257029E-4]:1.690946014027E0,4[&rate=6.653255347179759E-4]:1.690946014027E0)[&rate=8.718055494708534E-4]:1.367498459238E0,3[&rate=6.321712974769474E-4]:3.058444473265E0)[&rate=6.768976978316347E-4]:6.5581327134E0,5[&rate=3.0874329721526254E-4]:9.616577186665E0)[&rate=2.1701082867724318E-4]:2.696974047569E0,((7[&rate=4.457945651169165E-4]:8.985062939061E0,6[&rate=6.215619318246486E-4]:8.985062939061E0)[&rate=6.008821640348195E-4]:7.424368483705E-1,1[&rate=6.008821640348195E-4]:9.727499787432E0)[&rate=3.81127663699935E-4]:2.586051446802E0)[&rate=4.6548664412811644E-4]:6.064295634665E1,((30[&rate=7.684687899267046E-4]:5.274966031794E1,26[&rate=7.994307819304341E-4]:5.274966031794E1)[&rate=4.7516366126329994E-4]:1.027657859717E1,32[&rate=3.68828845468391E-4]:6.302623891511E1)[&rate=2.8805201206636246E-4]:9.930268665774E0)[&rate=5.907748014949115E-4]:1.270731311441E0,((16[&rate=3.68828845468391E-4]:3.198314187737E1,((22[&rate=8.928766965601316E-4]:2.977240922716E0,21[&rate=4.7516366126329994E-4]:2.977240922716E0)[&rate=6.321712974769474E-4]:5.016304052443E0,20[&rate=0.0011117238317192605]:7.993544975159E0)[&rate=0.0017504216705868088]:2.398959690221E1)[&rate=0.0012303439805651903]:3.986208150001E1,12[&rate=8.718055494708534E-4]:7.184522337738E1)[&rate=6.768976978316347E-4]:2.382015514943E0)[&rate=3.416859892993394E-4]:1.770296922258E0)[&rate=5.611785333078955E-4]:3.932868547233E-2)[&rate=5.133160106078826E-4]:4.912048050537E0,(17[&rate=7.994307819304341E-4]:7.210889706001E1,(27[&rate=4.943082428954315E-4]:2.290648121954E1,28[&rate=0.0011117238317192605]:2.290648121954E1)[&rate=7.400128759257029E-4]:4.920241584046E1)[&rate=6.111385492247486E-4]:8.840015490583E0)[&rate=0.0013187217632804934]:4.53140765663E1); +tree STATE_990000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55157.155388174986,EEF_ucld_branchRates=-266.168517335019,lnP=-55157.155388174986,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.549407163711136E-4]:9.237212614191E0,9[&rate=8.700229035677426E-4]:9.237212614191E0)[&rate=4.013281110871622E-4]:5.683589600134E0,15[&rate=4.4122624600277785E-4]:1.492080221433E1)[&rate=7.722657880420839E-4]:9.224454835667E1,(14[&rate=0.0011627372997929477]:4.434782796756E1,24[&rate=0.0011169430181629581]:4.434782796756E1)[&rate=0.0011627372997929477]:6.281752260343E1)[&rate=7.846505453339222E-4]:2.199724150413E1,((((((33[&rate=7.846505453339222E-4]:6.191185706921E1,13[&rate=3.6753569056112797E-4]:6.191185706921E1)[&rate=6.453719498370311E-4]:6.37308549237E0,(11[&rate=4.4122624600277785E-4]:2.169544447631E1,29[&rate=5.342612431328813E-4]:2.169544447631E1)[&rate=6.844293238555242E-4]:4.658949808526E1)[&rate=4.8539992719435175E-4]:1.448898210479E0,(19[&rate=5.248084394996597E-4]:1.075797236654E1,18[&rate=8.390289159714373E-4]:1.075797236654E1)[&rate=4.955623692927919E-4]:5.897586840552E1)[&rate=9.234872247763082E-4]:4.149530542963E0,((10[&rate=5.436132470412716E-4]:1.822802463047E1,31[&rate=6.172263883867203E-4]:1.822802463047E1)[&rate=3.6753569056112797E-4]:5.523186189473E1,23[&rate=5.987802242470426E-4]:7.34598865252E1)[&rate=6.35906765427893E-4]:4.234847898205E-1)[&rate=4.955623692927919E-4]:2.018003166238E0,(25[&rate=5.621059657824798E-4]:7.48169873301E1,((12[&rate=7.722657880420839E-4]:6.995284747091E1,(16[&rate=7.974664190715935E-4]:2.978169456473E1,((22[&rate=8.245947539194194E-4]:2.394321083169E0,21[&rate=9.04549375512589E-4]:2.394321083169E0)[&rate=6.453719498370311E-4]:6.015602641113E0,20[&rate=4.955623692927919E-4]:8.409923724282E0)[&rate=0.0014096038047440738]:2.137177084045E1)[&rate=0.0011169430181629581]:4.017115290618E1)[&rate=0.0014096038047440738]:1.661612763508E0,(((30[&rate=8.54141431297666E-4]:5.00595672351E1,26[&rate=5.712869688767864E-4]:5.00595672351E1)[&rate=8.54141431297666E-4]:9.268747231891E0,32[&rate=3.4606819816348567E-4]:5.932831446699E1)[&rate=4.013281110871622E-4]:9.92141148946E0,((((2[&rate=7.262499467059052E-4]:1.584583650241E0,4[&rate=7.154656690545067E-4]:1.584583650241E0)[&rate=3.180046976055937E-4]:5.686045510407E-1,3[&rate=6.744526087378945E-4]:2.153188201282E0)[&rate=7.154656690545067E-4]:7.543109868545E0,5[&rate=5.712869688767864E-4]:9.696298069827E0)[&rate=5.436132470412716E-4]:2.725922345153E0,((7[&rate=3.6753569056112797E-4]:7.474689952912E0,6[&rate=6.744526087378945E-4]:7.474689952912E0)[&rate=4.4122624600277785E-4]:9.362681276306E-1,1[&rate=6.744526087378945E-4]:8.410958080542E0)[&rate=5.712869688767864E-4]:4.011262334438E0)[&rate=6.844293238555242E-4]:5.682750554147E1)[&rate=9.04549375512589E-4]:2.364734277973E0)[&rate=8.390289159714373E-4]:3.20252709568E0)[&rate=8.390289159714373E-4]:1.084387151157E0)[&rate=3.180046976055937E-4]:4.668894258915E0,(17[&rate=6.945771841873951E-4]:7.106228232809E1,(27[&rate=6.744526087378945E-4]:2.221994934111E1,28[&rate=0.0010159428087795843]:2.221994934111E1)[&rate=5.436132470412716E-4]:4.884233298698E1)[&rate=9.896353561781568E-4]:9.507986412085E0)[&rate=0.0014096038047440738]:4.859232333495E1); +tree STATE_1000000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55136.136594571886,EEF_ucld_branchRates=-266.168517335019,lnP=-55136.136594571886,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.65726218474487E-4]:8.515430382666E0,9[&rate=6.06819128073254E-4]:8.515430382666E0)[&rate=7.929519599953199E-4]:6.728925838673E0,15[&rate=5.798508543767756E-4]:1.524435622134E1)[&rate=6.84438547709924E-4]:9.097024241699E1,(14[&rate=0.0011058922834672265]:4.53712664973E1,24[&rate=7.286769742686582E-4]:4.53712664973E1)[&rate=8.561277076731885E-4]:6.084333214103E1)[&rate=4.6356667714520205E-4]:2.351623400921E1,(((((((2[&rate=6.84438547709924E-4]:1.311736444966E0,4[&rate=8.22825256443977E-4]:1.311736444966E0)[&rate=4.914733263637745E-4]:8.675635577651E-1,3[&rate=0.0010242678641913187]:2.179300002731E0)[&rate=0.0011058922834672265]:7.236329918222E0,5[&rate=6.159929199778437E-4]:9.415629920953E0)[&rate=5.271064880275239E-4]:3.458666795373E0,((7[&rate=5.709977803998803E-4]:7.951718354199E0,6[&rate=4.1180574977025674E-4]:7.951718354199E0)[&rate=6.06819128073254E-4]:1.054511137922E0,1[&rate=6.252837701836565E-4]:9.006229492121E0)[&rate=7.171387201721583E-4]:3.868067224205E0)[&rate=4.5387707548858814E-4]:6.10954997398E1,(((30[&rate=5.534107495446971E-4]:5.047727243855E1,26[&rate=5.094330314067382E-4]:5.047727243855E1)[&rate=7.929519599953199E-4]:1.304383900529E1,32[&rate=6.06819128073254E-4]:6.352111144384E1)[&rate=3.418095027982908E-4]:8.701444286939E0,((16[&rate=2.5023735379034993E-4]:3.321061304552E1,((22[&rate=6.347074649665556E-4]:2.608552334697E0,21[&rate=2.949124689402047E-4]:2.608552334697E0)[&rate=5.358849889635957E-4]:4.771290987645E0,20[&rate=7.405922629509587E-4]:7.379843322343E0)[&rate=0.0013457290499930231]:2.583076972317E1)[&rate=0.0011058922834672265]:3.688665857329E1,12[&rate=0.0010242678641913187]:7.009727161881E1)[&rate=5.094330314067382E-4]:2.125284111971E0)[&rate=7.65726218474487E-4]:1.747240725351E0)[&rate=4.2296895275049435E-4]:3.705209196954E0,(25[&rate=6.740785995479225E-4]:7.561728716786E1,((((33[&rate=7.65726218474487E-4]:6.481482110201E1,13[&rate=3.7387684212836507E-4]:6.481482110201E1)[&rate=9.383012017246343E-4]:6.376144199023E0,(11[&rate=6.442805814590756E-4]:1.816058312655E1,29[&rate=3.5887064462889016E-4]:1.816058312655E1)[&rate=6.540207094626872E-4]:5.303038217448E1)[&rate=4.4392179565090097E-4]:5.750984260881E-1,(19[&rate=7.929519599953199E-4]:1.087880451071E1,18[&rate=5.446477529447429E-4]:1.087880451071E1)[&rate=4.6356667714520205E-4]:6.088725921641E1)[&rate=4.914733263637745E-4]:2.989215017322E0,((10[&rate=7.929519599953199E-4]:1.788856949451E1,31[&rate=6.540207094626872E-4]:1.788856949451E1)[&rate=3.2146743175579955E-4]:5.623416793485E1,23[&rate=5.271064880275239E-4]:7.412273742936E1)[&rate=6.347074649665556E-4]:6.32541315082E-1)[&rate=3.5887064462889016E-4]:8.620084234172E-1)[&rate=6.252837701836565E-4]:2.057718485222E0)[&rate=4.2296895275049435E-4]:4.941470638607E0,(17[&rate=8.389868262114616E-4]:7.440257651085E1,(27[&rate=3.5887064462889016E-4]:2.604575213884E1,28[&rate=0.0013457290499930231]:2.604575213884E1)[&rate=7.286769742686582E-4]:4.835682437201E1)[&rate=8.940139469297388E-4]:8.213899780837E0)[&rate=0.001585983349993784]:4.711435635585E1); +End; diff --git a/example_files/pxlog_example/run2.trees b/example_files/pxlog_example/run2.trees new file mode 100644 index 0000000..e3f3c04 --- /dev/null +++ b/example_files/pxlog_example/run2.trees @@ -0,0 +1,229 @@ +#NEXUS + +Begin taxa; + Dimensions ntax=33; + Taxlabels + 113_V_gryphus + 128_C_burrovianus + 135_C_aura + 31_C_melambrotus + 6_C_atratus + 97_S_papa + 9_G_californianus + Anas_clypeata + Anas_platyrhunchos + Apterodytes_patagonicus + Ardea_herodias + Asio_otus + Balaeniceps_rex + Bonasa_umbellus + Bucephala_abeola + Caracara_cheriway + Charadrius_alexandrinus + Ciconia_maguari + Ephippiorhynchus_senegalensis + Falco_femoralis + Falco_peregrinus + Falco_rusticolus + Fulmarus_glacialis + Gallus_gallus + Gavia_immer + Gyps_bengalensis + Larus_marinus + Lunda_cirrhata + Nyctanassa_violacea + Pandion + Pygoscelis_antarcticus + Sagittarius + Scopus_umbretta + ; +End; + +Begin trees; + Translate + 1 113_V_gryphus, + 2 128_C_burrovianus, + 3 135_C_aura, + 4 31_C_melambrotus, + 5 6_C_atratus, + 6 97_S_papa, + 7 9_G_californianus, + 8 Anas_clypeata, + 9 Anas_platyrhunchos, + 10 Apterodytes_patagonicus, + 11 Ardea_herodias, + 12 Asio_otus, + 13 Balaeniceps_rex, + 14 Bonasa_umbellus, + 15 Bucephala_abeola, + 16 Caracara_cheriway, + 17 Charadrius_alexandrinus, + 18 Ciconia_maguari, + 19 Ephippiorhynchus_senegalensis, + 20 Falco_femoralis, + 21 Falco_peregrinus, + 22 Falco_rusticolus, + 23 Fulmarus_glacialis, + 24 Gallus_gallus, + 25 Gavia_immer, + 26 Gyps_bengalensis, + 27 Larus_marinus, + 28 Lunda_cirrhata, + 29 Nyctanassa_violacea, + 30 Pandion, + 31 Pygoscelis_antarcticus, + 32 Sagittarius, + 33 Scopus_umbretta + ; +tree STATE_0 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-95143.48101001458,EEF_ucld_branchRates=-266.168517335019,lnP=-95143.48101001458,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=0.02234135338553881]:5.09961E0,9[&rate=0.02837737786871923]:5.09961E0)[&rate=0.08852504376910755]:4.69329E0,15[&rate=0.032172544376755666]:9.7929E0)[&rate=0.09048013234469902]:8.54202E1,(14[&rate=0.035178720277860634]:3.44813E1,24[&rate=0.03776392226896683]:3.44813E1)[&rate=0.09248621721034095]:6.07318E1)[&rate=0.09454809074648765]:1.90448E1,(((((19[&rate=0.040084625791642695]:7.55131E0,18[&rate=0.04222370293714232]:7.55131E0)[&rate=0.0966710180250762]:6.00086E1,((33[&rate=0.0442310403283049]:5.9902553E1,13[&rate=0.046139350448828095]:5.9902553E1)[&rate=0.0988608186246841]:7.11938E0,(11[&rate=0.04797145754430627]:1.4373533E1,29[&rate=0.04974406499292393]:1.4373533E1)[&rate=0.10112396417852913]:5.26484E1)[&rate=0.10346769579051854]:5.37977E-1)[&rate=0.10590016670797511]:1.74225E0,((10[&rate=0.05146987509034866]:1.0828134E1,31[&rate=0.05315886193965773]:1.0828134E1)[&rate=0.10843061735954053]:5.82947E1,23[&rate=0.05481907652257585]:6.9122834E1)[&rate=0.1110695922545826]:1.79326E-1)[&rate=0.11382921159990848]:2.10502E0,((12[&rate=0.05645717809392223]:6.697338E1,(((16[&rate=0.05807879781036426]:1.332987E1,((22[&rate=0.05968879545822361]:1.62809E0,21[&rate=0.06129144582349835]:1.62809E0)[&rate=0.11672351528643168]:1.80365E0,20[&rate=0.06289057748385585]:3.43174E0)[&rate=0.1197689038605611]:9.89813E0)[&rate=0.12298471138435389]:4.98254E1,((30[&rate=0.06448967869610779]:5.12196E1,26[&rate=0.06609198011174378]:5.12196E1)[&rate=0.1263939606029411]:4.75282E0,32[&rate=0.06770052095127599]:5.597242E1)[&rate=0.13002437475881606]:7.18285E0)[&rate=0.13390975820773335]:1.27429E0,((((3[&rate=0.06931820327112426]:7.55302E-1,4[&rate=0.0709478376436605]:7.55302E-1)[&rate=0.13809191947416302]:2.01528E-1,2[&rate=0.07259218269320954]:9.5683E-1)[&rate=0.14262341358753114]:5.45989E0,5[&rate=0.0742539803375295]:6.41672E0)[&rate=0.14757156021233067]:2.27674E0,((6[&rate=0.07593598818215795]:4.627846E0,7[&rate=0.07764101024517056]:4.627846E0)[&rate=0.15302452037296171]:5.82054E-1,1[&rate=0.0793719270149648]:5.2099E0)[&rate=0.1591008371574467]:3.48356E0)[&rate=0.16596510567742037]:5.57361E1)[&rate=0.1738551754505638]:2.54382E0)[&rate=0.18313278812845646]:2.6958E0,25[&rate=0.08113172574000375]:6.966918E1)[&rate=0.19438683381524174]:1.738E0)[&rate=0.20867186822964753]:1.19542E0,(17[&rate=0.08292353180254597]:6.23045E1,(27[&rate=0.08475064203020245]:2.25099E1,28[&rate=0.08661656249982545]:2.25099E1)[&rate=0.22816999477396083]:3.97946E1)[&rate=0.25868525683626453]:1.02981E1)[&rate=0.32857495943199877]:4.16553E1); +tree STATE_10000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55642.88669685059,EEF_ucld_branchRates=-266.168517335019,lnP=-55642.88669685059,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=1.7059247495734066E-4]:5.214364319514E0,9[&rate=0.004977268091956065]:5.214364319514E0)[&rate=2.764832205591581E-5]:4.399701646978E0,15[&rate=6.46092746186996E-4]:9.614065966492E0)[&rate=0.0012804811250744857]:9.300368803653E1,(14[&rate=0.0030560325187369637]:3.059480551555E1,24[&rate=0.0016506393730639976]:3.059480551555E1)[&rate=0.0019592168530436394]:7.202294848748E1)[&rate=0.03856650522494413]:1.592235398036E-1,(25[&rate=7.691944654578447E-4]:7.33283531147E1,(((17[&rate=0.002136759752053799]:3.727178781712E1,(27[&rate=4.931291636306746E-4]:2.934580396799E1,28[&rate=0.0010816572434484747]:2.934580396799E1)[&rate=0.0030560325187369637]:7.925983849128E0)[&rate=3.354987256452663E-4]:3.393908724801E1,(12[&rate=5.403513490720421E-4]:7.089283874881E1,(((30[&rate=5.912333395725239E-4]:5.642549249395E1,26[&rate=3.706889958902214E-4]:5.642549249395E1)[&rate=0.006920379925546729]:4.661387646598E0,32[&rate=1.4948519687465068E-4]:6.108688014055E1)[&rate=6.734848001969103E-6]:3.431418152891E0,(((((4[&rate=0.010081391278205282]:4.373377592155E-1,3[&rate=0.013490886332526377]:4.373377592155E-1)[&rate=0.010081391278205282]:7.12022564289E-2,2[&rate=0.019019442270180296]:5.085400156444E-1)[&rate=0.004491876257039267]:5.457718499777E0,5[&rate=5.142518363340267E-5]:5.966258515421E0)[&rate=0.029305072991786744]:1.445382453033E-1,((6[&rate=0.004491876257039267]:4.945948503991E0,7[&rate=1.2988857204521237E-4]:4.945948503991E0)[&rate=0.010081391278205282]:1.180638678735E-1,1[&rate=4.085450515753992E-4]:5.064012371864E0)[&rate=0.003354296400643816]:1.046784388861E0)[&rate=7.052822660780628E-4]:5.837429645166E1,(16[&rate=1.93314712653003E-4]:3.10702860565E1,((22[&rate=0.013490886332526377]:5.829742699403E-1,21[&rate=2.764832205591581E-5]:5.829742699403E-1)[&rate=0.0010816572434484747]:2.723937142235E0,20[&rate=6.478603459940597E-5]:3.306911412176E0)[&rate=0.0019592168530436394]:2.776337464432E1)[&rate=0.0011769160282665155]:3.341480715589E1)[&rate=0.223764331363126]:3.32050810503E-2)[&rate=0.003354296400643816]:6.374540455373E0)[&rate=0.006920379925546729]:3.180363163246E-1)[&rate=0.054506698704721294]:1.07230552409E-1,(((19[&rate=1.1170643075981579E-4]:5.47286942614E1,18[&rate=2.1776532158728905E-4]:5.47286942614E1)[&rate=0.002136759752053799]:1.541349290036E1,((33[&rate=8.382673558771904E-4]:6.66402531143E1,13[&rate=4.931291636306746E-4]:6.66402531143E1)[&rate=0.002136759752053799]:3.069469093374E0,(11[&rate=4.085450515753992E-4]:1.645602476491E1,29[&rate=9.129909201157009E-4]:1.645602476491E1)[&rate=0.0013932498202372464]:5.325369744276E1)[&rate=0.007795675452276504]:4.324649540828E-1)[&rate=0.0886262606756945]:1.600022065946E-2,((10[&rate=2.1776532158728905E-4]:6.048043001906E1,31[&rate=1.1170643075981579E-4]:6.048043001906E1)[&rate=0.0025489407635275003]:9.661282042664E0,23[&rate=3.706889958902214E-4]:7.014171206172E1)[&rate=0.019019442270180296]:1.647532069479E-2)[&rate=7.923569674572886E-5]:1.15991823513E0)[&rate=3.907584447185506E-5]:2.010247497156E0)[&rate=0.005533246223236269]:2.944862442812E1); +tree STATE_20000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55275.219692732775,EEF_ucld_branchRates=-266.168517335019,lnP=-55275.219692732775,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=0.0022997457419140738]:5.240882843361E0,9[&rate=0.0028965940884385383]:5.240882843361E0)[&rate=6.777784347624889E-5]:5.490876806141E0,15[&rate=8.081912377384307E-4]:1.07317596495E1)[&rate=6.547699319298554E-4]:9.354207159924E1,(14[&rate=0.001848508075092935]:3.082770233843E1,24[&rate=0.0017220482251467904]:3.082770233843E1)[&rate=8.081912377384307E-4]:7.344612891031E1)[&rate=0.017857568851752065]:5.215963715861E-2,(25[&rate=7.028534328051217E-4]:7.300710970977E1,(((17[&rate=0.0024795691472661923]:3.551663789333E1,(27[&rate=4.881281523585811E-4]:2.674820267421E1,28[&rate=0.0010632839544861931]:2.674820267421E1)[&rate=0.0024795691472661923]:8.768435219123E0)[&rate=1.584443962188327E-4]:3.696662633062E1,(12[&rate=8.659533789087062E-4]:7.20388485978E1,(((30[&rate=7.028534328051217E-4]:5.765062406832E1,26[&rate=4.520259524452992E-4]:5.765062406832E1)[&rate=0.004453032522749926]:2.640974747078E0,32[&rate=2.0052181003636096E-4]:6.02915988154E1)[&rate=4.178519563135782E-4]:5.336894608245E0,((16[&rate=1.2003035966835468E-4]:4.065506309952E1,((22[&rate=0.010083678078151173]:9.022341581582E-1,21[&rate=1.6359622371943326E-5]:9.022341581582E-1)[&rate=1.584443962188327E-4]:2.12320423905E0,20[&rate=0.004903112199516039]:3.025438397208E0)[&rate=0.0014976003821661268]:3.762962470231E1)[&rate=0.0017220482251467904]:2.495925341144E1,((((4[&rate=0.004060879261652358]:4.673347650917E-1,2[&rate=8.462704752667726E-5]:4.673347650917E-1)[&rate=6.777784347624889E-5]:1.08618498345E-1,3[&rate=0.00676216495931394]:5.759532634366E-1)[&rate=0.0013049620017759988]:5.64406205996E0,5[&rate=2.2311845794020807E-4]:6.220015323397E0)[&rate=0.011866131727310065]:1.071240966353E-1,((6[&rate=0.0031398479106215594]:5.30560414398E0,7[&rate=1.3881720045184917E-4]:5.30560414398E0)[&rate=0.00676216495931394]:1.155281533512E-1,1[&rate=5.124210819289332E-5]:5.421132297331E0)[&rate=0.005424685692408027]:9.060071227007E-1)[&rate=4.881281523585811E-4]:5.928717709093E1)[&rate=0.0739838291485339]:1.417691268114E-2)[&rate=0.0014976003821661268]:6.410355174164E0)[&rate=0.0076389417068984874]:4.444156261416E-1)[&rate=0.03499100442041858]:1.331719721656E-1,((((33[&rate=5.666803823683567E-4]:6.772556392289E1,13[&rate=2.7180297927690633E-4]:6.772556392289E1)[&rate=6.094449078807157E-4]:3.387912247288E0,(11[&rate=4.881281523585811E-4]:1.575135259869E1,29[&rate=0.0011383107037341317]:1.575135259869E1)[&rate=0.0013049620017759988]:5.536212357149E1)[&rate=0.03499100442041858]:6.990452801519E-2,(19[&rate=3.5479250689151513E-4]:5.573000751709E1,18[&rate=2.468529083670278E-4]:5.573000751709E1)[&rate=0.0010632839544861931]:1.545337318111E1)[&rate=0.014302135568641303]:1.719552652281E-1,((10[&rate=8.462704752667726E-5]:6.335943904311E1,31[&rate=2.468529083670278E-4]:6.335943904311E1)[&rate=0.001985983459455347]:7.45606980647E0,23[&rate=4.178519563135782E-4]:7.081550884958E1)[&rate=0.004453032522749926]:5.398271138463E-1)[&rate=0.0031398479106215594]:1.261100232686E0)[&rate=0.0076389417068984874]:3.906735136627E-1)[&rate=0.0024795691472661923]:3.131888117613E1); +tree STATE_30000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55179.45885855026,EEF_ucld_branchRates=-266.168517335019,lnP=-55179.45885855026,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.093277085855822E-5]:7.966702002258E0,9[&rate=0.002607953965603514]:7.966702002258E0)[&rate=5.564555476898796E-4]:4.644249499209E0,15[&rate=3.7722561982394447E-4]:1.261095150147E1)[&rate=0.0010833386397313249]:9.373329838215E1,(14[&rate=0.0016889536729345204]:3.842591425969E1,24[&rate=6.687242671499543E-4]:3.842591425969E1)[&rate=0.001225116695075007]:6.791833562393E1)[&rate=0.007903941459297839]:4.400958697616E0,(((25[&rate=5.227888993365406E-4]:7.951584084202E1,(12[&rate=9.03528465918031E-4]:7.816478512277E1,((16[&rate=1.1733751068509043E-4]:4.195555076814E1,((22[&rate=0.005809932199529795]:1.009744081656E0,21[&rate=2.0256173980437423E-4]:1.009744081656E0)[&rate=0.00207929865951241]:2.097288000226E0,20[&rate=0.002607953965603514]:3.107032081882E0)[&rate=0.0013040119681330977]:3.884851868626E1)[&rate=0.001480966687794605]:2.974182902233E1,(((30[&rate=4.603229682074566E-4]:6.020560690364E1,26[&rate=4.036362823128827E-4]:6.020560690364E1)[&rate=8.012437990984265E-4]:4.448629234009E0,32[&rate=3.7722561982394447E-4]:6.465423613765E1)[&rate=5.544696562049217E-5]:6.935852101311E0,((((4[&rate=0.00207929865951241]:6.2580394247E-1,3[&rate=0.003365507139701496]:6.2580394247E-1)[&rate=8.625101603454187E-5]:5.756548617124E-2,2[&rate=8.625101603454187E-5]:6.833694286412E-1)[&rate=0.0030788310142172877]:5.826519598302E0,5[&rate=2.2142266931635671E-4]:6.509889026943E0)[&rate=0.009610832529034448]:4.321959296728E-1,((6[&rate=0.0018072022304851565]:5.75145998676E0,7[&rate=0.0010833386397313249]:5.75145998676E0)[&rate=0.004086413317445849]:2.952693643029E-1,1[&rate=8.625101603454187E-5]:6.046729351063E0)[&rate=0.002828518326215556]:8.953556055525E-1)[&rate=4.3130605433649543E-4]:6.464800328234E1)[&rate=0.017379618861850667]:1.072915515083E-1)[&rate=8.012437990984265E-4]:6.467405332298E0)[&rate=5.227888993365406E-4]:1.351055719251E0)[&rate=0.017379618861850667]:6.666911997958E-2,((((33[&rate=4.603229682074566E-4]:7.371846215682E1,13[&rate=2.0256173980437423E-4]:7.371846215682E1)[&rate=0.0016889536729345204]:3.481654545272E0,(11[&rate=4.036362823128827E-4]:1.808226883445E1,29[&rate=7.545119022335537E-4]:1.808226883445E1)[&rate=6.292796698464019E-4]:5.911784786765E1)[&rate=0.004549592604630024]:3.911524673407E-2,(19[&rate=3.0476315215583605E-4]:5.498917330935E1,18[&rate=1.3336881406312087E-4]:5.498917330935E1)[&rate=6.292796698464019E-4]:2.225005863948E1)[&rate=0.004549592604630024]:1.679445911057E0,((10[&rate=1.6682673253621806E-4]:6.965509871845E1,31[&rate=1.4984264323979307E-4]:6.965509871845E1)[&rate=0.0019367532445759685]:8.797074402333E0,23[&rate=3.7722561982394447E-4]:7.845217312078E1)[&rate=0.006705437711460956]:4.665047390989E-1)[&rate=2.028546282488894E-5]:6.638321021139E-1)[&rate=0.017379618861850667]:2.206807318237E-1,(17[&rate=0.0013040119681330977]:4.049684309037E1,(27[&rate=2.410177000529094E-4]:3.210499180547E1,28[&rate=8.012437990984265E-4]:3.210499180547E1)[&rate=0.003365507139701496]:8.391851284907E0)[&rate=2.2142266931635671E-4]:3.930634760345E1)[&rate=0.001580601465450594]:3.094201788741E1); +tree STATE_40000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55151.5861721761,EEF_ucld_branchRates=-266.168517335019,lnP=-55151.5861721761,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=1.2024877354116295E-4]:7.83615994843E0,9[&rate=0.0019281225632662932]:7.83615994843E0)[&rate=1.0179008242508551E-4]:4.188164410096E0,15[&rate=0.0010393472887508326]:1.202432435853E1)[&rate=8.037287297770403E-4]:9.274659015965E1,(14[&rate=0.001517505018135576]:3.518337229476E1,24[&rate=0.0018117250133607113]:3.518337229476E1)[&rate=0.001517505018135576]:6.958754222342E1)[&rate=0.0035312008198202564]:8.049270441345E0,(((25[&rate=5.89061875203948E-4]:7.75772666266E1,(12[&rate=7.635994596572456E-4]:7.590560386979E1,(((((4[&rate=0.019413534648858456]:5.148552440012E-1,3[&rate=0.0012172668349647057]:5.148552440012E-1)[&rate=0.0025315315903773217]:1.527603398979E-1,2[&rate=5.585473782125097E-4]:6.676155838992E-1)[&rate=2.685730653486481E-4]:6.627946511455E0,5[&rate=1.0179008242508551E-4]:7.295562095354E0)[&rate=0.004914695865750292]:2.178349571865E-1,((6[&rate=0.0017053168495670518]:5.298853407629E0,7[&rate=4.74086965356768E-4]:5.298853407629E0)[&rate=0.004349463285911108]:6.747604825125E-1,1[&rate=3.9869494013806896E-4]:5.973613890142E0)[&rate=0.0035312008198202564]:1.539783162398E0)[&rate=5.011395039836326E-4]:6.260420563302E1,(((30[&rate=6.541617095780695E-4]:5.819548404854E1,26[&rate=4.480388474035561E-4]:5.819548404854E1)[&rate=0.0027310982599314648]:5.057138355641E0,32[&rate=4.480388474035561E-4]:6.325262240418E1)[&rate=1.2024877354116295E-4]:6.771980290792E0,(16[&rate=4.2292888790556026E-4]:4.028740091137E1,((22[&rate=0.004349463285911108]:1.300843264863E0,21[&rate=8.037287297770403E-4]:1.300843264863E0)[&rate=0.0020560901830160394]:1.789421380498E0,20[&rate=0.0014341275945921128]:3.090264645361E0)[&rate=0.001154210156648106]:3.719713626601E1)[&rate=0.0013567104445966446]:2.97372017836E1)[&rate=0.019413534648858456]:9.299999059417E-2)[&rate=0.00219757830793981]:5.78800118423E0)[&rate=0.002355026206423273]:1.671662756809E0)[&rate=0.0038997146115039155]:3.534939529989E-1,((((11[&rate=1.7434639890029653E-4]:1.90992836356E1,29[&rate=3.9869494013806896E-4]:1.90992836356E1)[&rate=4.74086965356768E-4]:5.50609951158E1,(33[&rate=6.209007276687648E-4]:7.176970778897E1,13[&rate=2.685730653486481E-4]:7.176970778897E1)[&rate=6.209007276687648E-4]:2.390570962426E0)[&rate=0.008239680386668955]:4.22680263424E-1,(19[&rate=3.526234339080626E-4]:4.796289214113E1,18[&rate=1.5631841322972652E-4]:4.796289214113E1)[&rate=6.541617095780695E-4]:2.662006687369E1)[&rate=1.9254107425393708E-4]:2.4021479802E0,((10[&rate=2.685730653486481E-4]:6.078052866148E1,31[&rate=2.887021797889817E-4]:6.078052866148E1)[&rate=8.903898380962199E-4]:1.564059449111E1,23[&rate=6.88951703283418E-4]:7.642112315259E1)[&rate=3.502202002635079E-5]:5.639838424251E-1)[&rate=1.2024877354116295E-4]:9.456535845826E-1)[&rate=0.008239680386668955]:2.459783262736E-1,(17[&rate=0.001607601700185582]:4.031168022208E1,(27[&rate=2.4894790833034243E-4]:3.114826819936E1,28[&rate=0.0010950240013525745]:3.114826819936E1)[&rate=0.0025315315903773217]:9.163412022729E0)[&rate=2.1099221147138187E-4]:3.786505868379E1)[&rate=0.0012172668349647057]:3.464344605365E1); +tree STATE_50000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55105.61998721235,EEF_ucld_branchRates=-266.168517335019,lnP=-55105.61998721235,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=1.8583754139810886E-4]:8.30381200721E0,9[&rate=0.0016619852085184733]:8.30381200721E0)[&rate=0.0013269492615378706]:4.570806837338E0,15[&rate=5.224021745658479E-4]:1.287461884455E1)[&rate=8.433792054573883E-4]:9.662761576276E1,(14[&rate=0.001842895668625106]:3.533451664375E1,24[&rate=0.0019488454321163384]:3.533451664375E1)[&rate=0.0011759685359490231]:7.416771796355E1)[&rate=0.0025494688700410445]:1.253245067508E1,(((25[&rate=5.224021745658479E-4]:8.143916531135E1,(12[&rate=7.852497258477975E-4]:7.904433201738E1,((16[&rate=4.420479347821922E-4]:4.249565777432E1,((22[&rate=0.007236803347514898]:8.435189016241E-1,21[&rate=3.6559432702462587E-4]:8.435189016241E-1)[&rate=2.0874203179274505E-4]:2.296540134592E0,20[&rate=0.0022045668482277873]:3.140059036216E0)[&rate=0.0013269492615378706]:3.93555987381E1)[&rate=0.0012232415092133051]:3.3195017367E1,(((30[&rate=6.322530459835106E-4]:6.303375848626E1,26[&rate=5.224021745658479E-4]:6.303375848626E1)[&rate=0.0019488454321163384]:5.533605802785E0,32[&rate=5.434023146856892E-4]:6.856736428905E1)[&rate=4.0350479223239113E-4]:6.594491148246E0,((((4[&rate=6.322530459835106E-4]:6.290119043669E-1,3[&rate=0.007236803347514898]:6.290119043669E-1)[&rate=0.0016619852085184733]:1.347508279638E-1,2[&rate=0.0010107092856123723]:7.637627323307E-1)[&rate=0.0015118590250623053]:7.009647841041E0,5[&rate=3.089667911696571E-4]:7.773410573371E0)[&rate=0.002362597073626008]:6.154429127538E-1,((6[&rate=9.742764086127082E-4]:5.534208323989E0,7[&rate=6.802064832929527E-4]:5.534208323989E0)[&rate=0.0010107092856123723]:6.638088782582E-1,1[&rate=7.852497258477975E-4]:6.198017202247E0)[&rate=0.0010489081494616018]:2.190836283878E0)[&rate=4.815738197040346E-4]:6.677300195117E1)[&rate=2.0874203179274505E-4]:5.288197040292E-1)[&rate=0.0011313246803090961]:3.353656876053E0)[&rate=2.898637548441505E-4]:2.394833293972E0)[&rate=7.852497258477975E-4]:6.393713404125E-1,((((11[&rate=3.6559432702462587E-4]:1.224039862114E1,29[&rate=5.648458268033617E-4]:1.224039862114E1)[&rate=6.802064832929527E-4]:6.75178419617E1,(33[&rate=6.558960257922692E-4]:7.652100015676E1,13[&rate=4.6166765865036214E-4]:7.652100015676E1)[&rate=0.002362597073626008]:3.237240426083E0)[&rate=0.003980780460395201]:7.195961936941E-2,(19[&rate=3.278987722173E-4]:4.871005975689E1,18[&rate=2.0874203179274505E-4]:4.871005975689E1)[&rate=6.558960257922692E-4]:3.112014044532E1)[&rate=8.830197446938774E-5]:1.166485174347E0,((10[&rate=3.6559432702462587E-4]:6.460730076639E1,31[&rate=2.704752458917994E-4]:6.460730076639E1)[&rate=0.001445598936565789]:1.632387220284E1,23[&rate=6.802064832929527E-4]:8.093117296922E1)[&rate=0.003980780460395201]:6.55124073333E-2)[&rate=9.061117169393191E-4]:1.081851275203E0)[&rate=1.8583754139810886E-4]:1.801877816145E0,(17[&rate=0.001445598936565789]:4.453465969247E1,(27[&rate=5.018056947016706E-4]:3.084121227728E1,28[&rate=0.0011759685359490231]:3.084121227728E1)[&rate=0.0027762329515066088]:1.369344741518E1)[&rate=2.704752458917994E-4]:3.934575477544E1)[&rate=0.0015836838539062658]:3.815427081448E1); +tree STATE_60000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55111.62792429199,EEF_ucld_branchRates=-266.168517335019,lnP=-55111.62792429199,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.538992658048271E-4]:7.441056715106E0,9[&rate=9.941617356538372E-4]:7.441056715106E0)[&rate=3.078494413972936E-4]:4.457040316086E0,15[&rate=4.7158036587329773E-4]:1.189809703119E1)[&rate=8.556137160290516E-4]:8.571050538679E1,(14[&rate=0.0018429462297447567]:3.268110138571E1,24[&rate=0.0010947148054252292]:3.268110138571E1)[&rate=0.0011721106878371922]:6.492750103227E1)[&rate=0.0018429462297447567]:1.567116142431E1,(((25[&rate=7.203735562568342E-4]:7.56375733171E1,(12[&rate=7.626006135236245E-4]:7.354483027568E1,((16[&rate=6.240260728132073E-4]:3.949975758157E1,((22[&rate=0.0042357314335145875]:9.64847288426E-1,21[&rate=7.203735562568342E-4]:9.64847288426E-1)[&rate=8.075161398525856E-4]:2.318192825252E0,20[&rate=9.350955151799289E-4]:3.283040113678E0)[&rate=0.0012147692562342583]:3.621671746789E1)[&rate=0.0014874701096311014]:3.092740425895E1,(((((4[&rate=2.282049761452876E-4]:6.368219969635E-1,3[&rate=0.0011721106878371922]:6.368219969635E-1)[&rate=0.0010947148054252292]:2.033548134021E-1,2[&rate=3.9149767996290004E-4]:8.401768103657E-1)[&rate=0.0013638018675086931]:5.857240068021E0,5[&rate=2.503732783304687E-4]:6.697416878386E0)[&rate=3.9149767996290004E-4]:1.439794968704E0,((6[&rate=3.4231849734131373E-4]:6.211397536231E0,7[&rate=2.282049761452876E-4]:6.211397536231E0)[&rate=9.350955151799289E-4]:4.677496965037E-1,1[&rate=4.877300137101249E-4]:6.679147232735E0)[&rate=7.001374737842162E-4]:1.458064614355E0)[&rate=5.204396049472888E-4]:6.147952269519E1,((30[&rate=8.311323122272067E-4]:5.588779470208E1,26[&rate=6.240260728132073E-4]:5.588779470208E1)[&rate=0.0012605854925909956]:8.164562974057E0,32[&rate=4.075588761986994E-4]:6.405235767613E1)[&rate=3.5894856884965536E-4]:5.564376866147E0)[&rate=0.001972563025191415]:8.104272982359E-1)[&rate=8.810399999078945E-4]:3.117668435158E0)[&rate=6.424070622738159E-4]:2.092743041423E0)[&rate=0.002132516978724837]:7.70792623924E-1,((((11[&rate=5.040060712953338E-4]:1.203374014899E1,29[&rate=9.941617356538372E-4]:1.203374014899E1)[&rate=6.424070622738159E-4]:6.088935008872E1,(33[&rate=6.240260728132073E-4]:7.123885267469E1,13[&rate=6.060170561093041E-4]:7.123885267469E1)[&rate=0.0014874701096311014]:1.684237563027E0)[&rate=0.0017343714012775131]:5.62794630855E-1,(19[&rate=3.9149767996290004E-4]:3.983278390526E1,18[&rate=2.706758974187468E-4]:3.983278390526E1)[&rate=4.7158036587329773E-4]:3.365310096331E1)[&rate=1.2605267246977003E-4]:1.764305042757E0,((10[&rate=2.503732783304687E-4]:6.156727654509E1,31[&rate=3.253276804452044E-4]:6.156727654509E1)[&rate=6.060170561093041E-4]:1.309452771813E1,23[&rate=5.204396049472888E-4]:7.466180426322E1)[&rate=0.0026295046194605392]:5.883856481089E-1)[&rate=0.0013100567752042192]:1.158176029695E0)[&rate=5.370607698027861E-4]:8.160042843674E-1,(17[&rate=0.0014226033469815042]:3.806468735737E1,(27[&rate=5.204396049472888E-4]:2.555940916135E1,28[&rate=0.0014874701096311014]:2.555940916135E1)[&rate=0.0023396740775661184]:1.250527819602E1)[&rate=2.8971288388195165E-4]:3.915968286802E1)[&rate=0.001025912059695766]:3.60553936169E1); +tree STATE_70000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55138.73121008681,EEF_ucld_branchRates=-266.168517335019,lnP=-55138.73121008681,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.9622805302690165E-4]:9.336339779033E0,9[&rate=6.950698531018992E-4]:9.336339779033E0)[&rate=0.0013369471148943913]:3.684544845771E0,15[&rate=8.661703409047905E-4]:1.30208846248E1)[&rate=8.244262204180266E-4]:8.305246056496E1,(14[&rate=0.0016676280406441328]:3.249811898593E1,24[&rate=0.0011331874188382682]:3.249811898593E1)[&rate=8.880983732002431E-4]:6.357522620384E1)[&rate=0.0016676280406441328]:1.197484699169E1,(((25[&rate=7.298730881563027E-4]:7.498477612847E1,(12[&rate=7.851143181163521E-4]:7.384891653046E1,(((30[&rate=3.9622805302690165E-4]:5.779709332218E1,26[&rate=5.665974217404584E-4]:5.779709332218E1)[&rate=0.0011331874188382682]:6.386094690859E0,32[&rate=3.0336898636978835E-4]:6.418318801304E1)[&rate=0.0013369471148943913]:7.60320199624E0,(((((4[&rate=7.298730881563027E-4]:7.824859916362E-1,3[&rate=0.001888900440273807]:7.824859916362E-1)[&rate=5.820104466163687E-4]:2.351825373114E-1,2[&rate=4.1260439055997304E-4]:1.017668528948E0)[&rate=5.665974217404584E-4]:6.163222423978E0,5[&rate=9.845765058870604E-4]:7.180890952926E0)[&rate=4.752227132376784E-4]:1.763636015765E0,((6[&rate=0.0016676280406441328]:5.135570696733E0,7[&rate=0.0013888214110897104]:5.135570696733E0)[&rate=5.056831750804117E-4]:1.460987387415E0,1[&rate=5.512874401353108E-4]:6.596558084147E0)[&rate=4.443418730257761E-4]:2.347968884544E0)[&rate=5.208612524465843E-4]:6.108029195486E1,(16[&rate=3.619050584119115E-4]:3.6520018687E1,((22[&rate=0.0033935492636631473]:1.48315984312E0,21[&rate=8.44966955104092E-4]:1.48315984312E0)[&rate=9.589656995612495E-4]:2.09807087363E0,20[&rate=6.452368670087717E-4]:3.58123071675E0)[&rate=0.0010689891750371378]:3.293878797025E1)[&rate=6.615717311686381E-4]:3.350480023655E1)[&rate=0.0016676280406441328]:1.761571085727E0)[&rate=0.0011683048900951976]:2.062526521183E0)[&rate=0.0010113597237330911]:1.135859598007E0)[&rate=6.781730438780525E-4]:1.302673375147E0,((((11[&rate=9.344134471599295E-4]:1.453286174169E1,29[&rate=6.781730438780525E-4]:1.453286174169E1)[&rate=7.298730881563027E-4]:5.866303209169E1,(33[&rate=6.452368670087717E-4]:7.112819473435E1,13[&rate=3.0336898636978835E-4]:7.112819473435E1)[&rate=0.0012461080996574643]:2.067699099029E0)[&rate=9.845765058870604E-4]:1.055898309625E0,(19[&rate=3.0336898636978835E-4]:3.431880231909E1,18[&rate=3.0336898636978835E-4]:3.431880231909E1)[&rate=5.975540232372116E-4]:3.993298982391E1)[&rate=5.820104466163687E-4]:5.725379002252E-1,((10[&rate=3.0336898636978835E-4]:5.471499156246E1,31[&rate=3.0336898636978835E-4]:5.471499156246E1)[&rate=4.443418730257761E-4]:1.888915835567E1,23[&rate=6.615717311686381E-4]:7.360414991813E1)[&rate=0.0012896237035172923]:1.220180125097E0)[&rate=4.443418730257761E-4]:1.46311946039E0)[&rate=0.0011331874188382682]:6.725952283217E-1,(17[&rate=0.0011001659448224704]:4.359805049111E1,(27[&rate=5.820104466163687E-4]:2.583337956488E1,28[&rate=0.002044480977136792]:2.583337956488E1)[&rate=0.002598532484464891]:1.776467092623E1)[&rate=1.6885972985721553E-4]:3.336199424082E1)[&rate=0.0012461080996574643]:3.108814744952E1); +tree STATE_80000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55145.25448843567,EEF_ucld_branchRates=-266.168517335019,lnP=-55145.25448843567,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.4115803323881084E-4]:7.730418688466E0,9[&rate=4.8582984398326133E-4]:7.730418688466E0)[&rate=0.0015029454472448214]:4.555665981403E0,15[&rate=2.929119239390291E-4]:1.228608466987E1)[&rate=9.038239677579695E-4]:8.575253524172E1,(14[&rate=0.0018153481748545816]:3.088958858763E1,24[&rate=0.001206556378374931]:3.088958858763E1)[&rate=0.0010854773246533438]:6.714903132396E1)[&rate=0.0016905037389932677]:1.806732980832E1,(((25[&rate=5.148665264022944E-4]:7.404513710398E1,(12[&rate=7.87990473049401E-4]:7.275101385145E1,((16[&rate=4.5718575932360956E-4]:3.951070771191E1,((22[&rate=0.003398712838132031]:1.101599879702E0,21[&rate=4.7147248175570403E-4]:1.101599879702E0)[&rate=6.391416055963323E-4]:2.209371891174E0,20[&rate=9.578429825210946E-4]:3.310971770877E0)[&rate=0.001254008478669916]:3.619973594103E1)[&rate=8.786821208918897E-4]:3.243812438517E1,(((((4[&rate=9.578429825210946E-4]:6.801926081158E-1,3[&rate=0.001206556378374931]:6.801926081158E-1)[&rate=5.002856381733146E-4]:2.004777936722E-1,2[&rate=2.5634129761138626E-4]:8.80670401788E-1)[&rate=0.001588698406335788]:6.603550333511E0,5[&rate=8.546237643404725E-4]:7.484220735299E0)[&rate=2.5634129761138626E-4]:9.774235785752E-1,((6[&rate=0.0013061597193515032]:4.94063074717E0,7[&rate=6.22614097591786E-4]:4.94063074717E0)[&rate=5.749572315145197E-4]:4.851998148798E-1,1[&rate=2.3551854684889613E-4]:5.42583056205E0)[&rate=0.0010505902680888546]:3.035813751824E0)[&rate=5.002856381733146E-4]:6.124857619653E1,((30[&rate=6.064272903252232E-4]:5.7033514808E1,26[&rate=8.093622990581231E-4]:5.7033514808E1)[&rate=0.0010178547718703056]:7.766485284444E0,32[&rate=3.8568335064909873E-4]:6.480000009244E1)[&rate=6.064272903252232E-4]:4.910220417966E0)[&rate=5.905511838967516E-4]:2.238611586668E0)[&rate=9.038239677579695E-4]:8.021817543764E-1)[&rate=0.0018153481748545816]:1.294123252527E0)[&rate=1.8220053590731192E-4]:1.000062187401E0,((((11[&rate=7.093280651016263E-4]:1.687652604497E1,29[&rate=0.0011630303899414385]:1.687652604497E1)[&rate=5.295984699066617E-4]:5.411608115147E1,(33[&rate=7.67361090410561E-4]:6.775219023821E1,13[&rate=2.5634129761138626E-4]:6.775219023821E1)[&rate=9.301660316650421E-4]:3.240416958232E0)[&rate=6.910969784660186E-4]:8.29389840526E-1,(19[&rate=3.4115803323881084E-4]:2.572577847674E1,18[&rate=3.562724373323399E-4]:2.572577847674E1)[&rate=2.5634129761138626E-4]:4.609621856022E1)[&rate=5.295984699066617E-4]:1.478633685752E0,((10[&rate=3.8568335064909873E-4]:5.001201933281E1,31[&rate=2.5634129761138626E-4]:5.001201933281E1)[&rate=5.596180429418019E-4]:2.25852457058E1,23[&rate=5.749572315145197E-4]:7.259726503861E1)[&rate=4.2870421720444336E-4]:7.033656841102E-1)[&rate=6.733479110147295E-4]:1.744568568661E0)[&rate=5.148665264022944E-4]:1.360400243918E0,(17[&rate=0.0013640268187175902]:4.172366642007E1,(27[&rate=7.474111308410958E-4]:2.313692969284E1,28[&rate=0.0015029454472448214]:2.313692969284E1)[&rate=0.002554046860737086]:1.858673672723E1)[&rate=3.8568335064909873E-4]:3.468193311523E1)[&rate=0.0010178547718703056]:3.970035018461E1); +tree STATE_90000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55109.47699107278,EEF_ucld_branchRates=-266.168517335019,lnP=-55109.47699107278,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.840336032317837E-4]:8.00398581167E0,9[&rate=7.996705929676291E-4]:8.00398581167E0)[&rate=0.0014386574635264692]:4.859605983213E0,15[&rate=4.574617847737402E-4]:1.286359179488E1)[&rate=8.710810382463166E-4]:8.198376615948E1,(14[&rate=0.0015300484901014898]:3.339364268139E1,24[&rate=9.251839205020714E-4]:3.339364268139E1)[&rate=8.223565153603983E-4]:6.145371527297E1)[&rate=0.0023036185151446317]:2.462025436272E1,(((25[&rate=5.832290110216934E-4]:7.610092648574E1,(12[&rate=0.0010197589318503301]:7.534951292095E1,((16[&rate=5.251267633510919E-4]:4.154891537441E1,((22[&rate=0.003058105656467023]:1.375737760733E0,21[&rate=8.973809022793283E-4]:1.375737760733E0)[&rate=5.536211736633264E-4]:2.567680865564E0,20[&rate=1.265709828220229E-4]:3.943418626297E0)[&rate=0.0011847522586602493]:3.760549674811E1)[&rate=8.223565153603983E-4]:3.094262524976E1,(((((4[&rate=7.177913733427153E-4]:8.997987242125E-1,3[&rate=0.0011378383609239545]:8.997987242125E-1)[&rate=4.4435296088165687E-4]:3.66102703311E-1,2[&rate=3.665560212117038E-4]:1.265901427523E0)[&rate=0.0013616385891715836]:6.349056624805E0,5[&rate=7.779572115670539E-4]:7.614958052328E0)[&rate=2.3572080475706605E-4]:5.836908579268E-1,((6[&rate=0.0011378383609239545]:5.026110135662E0,7[&rate=3.1296143265109545E-4]:5.026110135662E0)[&rate=7.370933373164055E-4]:4.814374748305E-1,1[&rate=5.392478272761437E-4]:5.507547610492E0)[&rate=9.546847865187677E-4]:2.691101299763E0)[&rate=6.991557709965875E-4]:6.279682083793E1,((30[&rate=5.682725534011683E-4]:5.604966973092E1,26[&rate=4.840336032317837E-4]:5.604966973092E1)[&rate=8.223565153603983E-4]:8.000213498123E0,32[&rate=2.3572080475706605E-4]:6.404988322905E1)[&rate=2.5297723635343345E-4]:6.945586519142E0)[&rate=6.141735379833022E-4]:1.496070875981E0)[&rate=0.0012951798970701396]:2.85797229678E0)[&rate=3.1296143265109545E-4]:7.514135647915E-1)[&rate=4.4435296088165687E-4]:8.3790560267E-1,((((11[&rate=7.996705929676291E-4]:1.538753549877E1,29[&rate=5.536211736633264E-4]:1.538753549877E1)[&rate=6.811299194303528E-4]:5.520288286517E1,(33[&rate=6.467085072785578E-4]:6.76614109157E1,13[&rate=2.5297723635343345E-4]:6.76614109157E1)[&rate=0.0016420588709237201]:2.929007448241E0)[&rate=4.7068081942901126E-4]:2.457340157162E0,(19[&rate=4.574617847737402E-4]:3.028520216973E1,18[&rate=3.795675884008127E-4]:3.028520216973E1)[&rate=4.1836809950454817E-4]:4.276255635137E1)[&rate=2.3572080475706605E-4]:2.536913340953E0,((10[&rate=4.1836809950454817E-4]:4.641765959116E1,31[&rate=3.1296143265109545E-4]:4.641765959116E1)[&rate=6.467085072785578E-4]:2.789479115462E1,23[&rate=4.4435296088165687E-4]:7.431245074578E1)[&rate=9.546847865187677E-4]:1.272221116275E0)[&rate=5.392478272761437E-4]:1.354160226354E0)[&rate=2.6904767001578674E-4]:1.626858536892E0,(17[&rate=0.0012367895789387583]:4.927102556207E1,(27[&rate=3.534418824992192E-4]:2.572433588991E1,28[&rate=0.0016420588709237201]:2.572433588991E1)[&rate=0.0010951374403498251]:2.354668967216E1)[&rate=3.665560212117038E-4]:2.929466506324E1)[&rate=2.3572080475706605E-4]:4.090192169178E1); +tree STATE_100000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.610719796365,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.610719796365,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.462870198185977E-4]:7.613406890115E0,9[&rate=0.0010795542224252203]:7.613406890115E0)[&rate=0.0010279037202679709]:4.038953023627E0,15[&rate=5.058084490360357E-4]:1.165235991374E1)[&rate=9.382085606628969E-4]:8.363439517772E1,(14[&rate=0.0016587769037409892]:3.104747995178E1,24[&rate=0.0012035266156994505]:3.104747995178E1)[&rate=0.0013252441756373902]:6.423927513969E1)[&rate=0.002714463157534833]:2.304085551009E1,(((25[&rate=5.891003052335953E-4]:7.57172239732E1,(12[&rate=9.179741691323471E-4]:7.270659840141E1,((16[&rate=4.462870198185977E-4]:3.707765216092E1,((22[&rate=0.0021688636672918776]:1.169124745366E0,21[&rate=0.0010795542224252203]:1.169124745366E0)[&rate=0.0013745592288619457]:2.26824810425E0,20[&rate=6.866994961161355E-4]:3.437372849616E0)[&rate=8.795709381822285E-4]:3.364027931131E1)[&rate=9.592275750439442E-4]:3.473229590857E1,(((((4[&rate=0.001493830115503096]:1.442406040212E0,3[&rate=0.0011374333382258078]:1.442406040212E0)[&rate=8.795709381822285E-4]:1.240488783649E-1,2[&rate=6.303921094679419E-4]:1.566454918576E0)[&rate=9.179741691323471E-4]:5.90625832063E0,5[&rate=3.5655142794869523E-4]:7.472713239206E0)[&rate=0.0012405454944352697]:1.091966896939E0,((6[&rate=0.0016587769037409892]:4.943662557244E0,7[&rate=6.02823095812913E-4]:4.943662557244E0)[&rate=6.303921094679419E-4]:9.901832006604E-1,1[&rate=7.011565510435902E-4]:5.933845757904E0)[&rate=0.001493830115503096]:2.630834378241E0)[&rate=6.165786817065493E-4]:6.173075716229E1,((30[&rate=8.262481393526499E-4]:5.829898465996E1,26[&rate=5.891003052335953E-4]:5.829898465996E1)[&rate=6.303921094679419E-4]:7.205829497986E0,32[&rate=6.02823095812913E-4]:6.550481415795E1)[&rate=3.5655142794869523E-4]:4.790623140484E0)[&rate=0.0012405454944352697]:1.514510771059E0)[&rate=0.0013252441756373902]:8.966503319162E-1)[&rate=9.179741691323471E-4]:3.010625571795E0)[&rate=0.0010279037202679709]:1.68378577113E0,((((11[&rate=3.770718888829964E-4]:1.618303173566E1,29[&rate=5.753839216799205E-4]:1.618303173566E1)[&rate=7.612337052054933E-4]:5.551284596895E1,(33[&rate=7.306940729987538E-4]:6.858652272786E1,13[&rate=4.914218480606181E-4]:6.858652272786E1)[&rate=6.72417934702876E-4]:3.109354976753E0)[&rate=3.33600057416353E-4]:2.05260301805E0,(19[&rate=6.72417934702876E-4]:2.709217675338E1,18[&rate=7.011565510435902E-4]:2.709217675338E1)[&rate=3.959213752214245E-4]:4.665630396929E1)[&rate=2.726954591920745E-4]:1.704054153719E0,((10[&rate=5.058084490360357E-4]:4.432925327926E1,31[&rate=3.5655142794869523E-4]:4.432925327926E1)[&rate=8.094212003799486E-4]:2.992879470369E1,23[&rate=5.616457291361167E-4]:7.425804798295E1)[&rate=9.592275750439442E-4]:1.194486893431E0)[&rate=8.094212003799486E-4]:1.948474867952E0)[&rate=7.158131383394664E-4]:1.795279964466E0,(17[&rate=8.435195717659292E-4]:5.766968031465E1,(27[&rate=4.1355636632161864E-4]:3.155778232493E1,28[&rate=0.0012808853385523006]:3.155778232493E1)[&rate=0.001003970407794378]:2.611189798972E1)[&rate=4.462870198185977E-4]:2.152660939415E1)[&rate=4.914218480606181E-4]:3.913132089275E1); +tree STATE_110000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55141.547827532675,EEF_ucld_branchRates=-266.168517335019,lnP=-55141.547827532675,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.50490203711985E-4]:7.520816953548E0,9[&rate=9.286864176622678E-4]:7.520816953548E0)[&rate=5.940393853311583E-4]:3.917336941711E0,15[&rate=7.293565623128751E-4]:1.143815389526E1)[&rate=9.519716952779099E-4]:8.234198355467E1,(14[&rate=0.00169624325075304]:3.123124625893E1,24[&rate=0.0014603098379207488]:3.123124625893E1)[&rate=0.0011676980479827731]:6.254889119099E1)[&rate=0.0019073845388496312]:1.9988632576E1,(((25[&rate=7.92834364602894E-4]:7.35458547101E1,(12[&rate=8.099958106489196E-4]:7.177458369802E1,((16[&rate=3.1576595208278714E-4]:3.398766808487E1,((22[&rate=0.0014603098379207488]:1.280910172517E0,21[&rate=3.948932920659541E-4]:1.280910172517E0)[&rate=0.0011676980479827731]:2.207916077109E0,20[&rate=0.0010028077366255684]:3.488826249626E0)[&rate=0.001210979099976398]:3.049884183525E1)[&rate=8.654872792053596E-4]:3.682827657737E1,(((((4[&rate=6.322231815460089E-4]:1.22241696622E0,3[&rate=0.0011287614642904497]:1.22241696622E0)[&rate=3.948932920659541E-4]:2.664836783668E-1,2[&rate=9.286864176622678E-4]:1.488900644586E0)[&rate=0.0010933480764393029]:5.790307684552E0,5[&rate=4.346682322488961E-4]:7.279208329138E0)[&rate=7.601564484345011E-4]:8.632197662523E-1,((6[&rate=4.346682322488961E-4]:5.151545102416E0,7[&rate=6.193277607317895E-4]:5.151545102416E0)[&rate=5.57051417619346E-4]:7.812374413602E-1,1[&rate=3.1576595208278714E-4]:5.932782543776E0)[&rate=0.001259743050354543]:2.209645551615E0)[&rate=5.327820955731157E-4]:6.072570595604E1,((30[&rate=6.322231815460089E-4]:5.512236356622E1,26[&rate=5.57051417619346E-4]:5.512236356622E1)[&rate=5.57051417619346E-4]:7.617389818675E0,32[&rate=4.965251106693781E-4]:6.27397533849E1)[&rate=5.57051417619346E-4]:6.128380666532E0)[&rate=5.207001733109903E-4]:1.94781061081E0)[&rate=6.193277607317895E-4]:9.586390357789E-1)[&rate=9.519716952779099E-4]:1.771271012081E0)[&rate=3.1576595208278714E-4]:1.350868452503E0,((((11[&rate=5.086228024720246E-4]:1.56507010522E1,29[&rate=6.721795119442003E-4]:1.56507010522E1)[&rate=7.92834364602894E-4]:5.466278725722E1,(33[&rate=5.940393853311583E-4]:6.445982541689E1,13[&rate=5.327820955731157E-4]:6.445982541689E1)[&rate=0.0010933480764393029]:5.853662892523E0)[&rate=8.462526086776752E-4]:3.505714332459E-1,(19[&rate=7.92834364602894E-4]:2.193018447118E1,18[&rate=5.327820955731157E-4]:2.193018447118E1)[&rate=7.14559812335083E-4]:4.873387527148E1)[&rate=7.293565623128751E-4]:1.524089096682E0,((10[&rate=3.6603982548435483E-4]:4.33270149128E1,31[&rate=3.50490203711985E-4]:4.33270149128E1)[&rate=7.14559812335083E-4]:2.722695932296E1,23[&rate=6.066068731726846E-4]:7.055397423576E1)[&rate=1.9332936176757204E-4]:1.634174603585E0)[&rate=4.47343344707378E-4]:2.708574323262E0)[&rate=8.27780186392064E-4]:3.39497493835E-1,(17[&rate=0.0010933480764393029]:5.132139509379E1,(27[&rate=3.948932920659541E-4]:2.844001942234E1,28[&rate=0.0013156319960538113]:2.844001942234E1)[&rate=4.47343344707378E-4]:2.288137567145E1)[&rate=3.1576595208278714E-4]:2.391482556265E1)[&rate=9.065974314674346E-4]:3.853254936949E1); +tree STATE_120000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55154.173673600235,EEF_ucld_branchRates=-266.168517335019,lnP=-55154.173673600235,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.464075729485166E-4]:6.894738316127E0,9[&rate=0.0013243260626542945]:6.894738316127E0)[&rate=9.272019487734993E-4]:4.955400297482E0,15[&rate=9.99216384659642E-4]:1.185013861361E1)[&rate=9.272019487734993E-4]:8.88505855867E1,(14[&rate=0.0018937393351503157]:3.302690339376E1,24[&rate=0.0010258265761553685]:3.302690339376E1)[&rate=0.001188216554459461]:6.767382080655E1)[&rate=7.732081732316908E-4]:1.530033882335E1,(((25[&rate=7.403526590562529E-4]:7.076175145544E1,(12[&rate=8.44814349404329E-4]:6.876717803406E1,((16[&rate=4.602354359926559E-4]:3.165665689879E1,((22[&rate=0.0014461054736281227]:1.341957233871E0,21[&rate=3.5523645554179947E-4]:1.341957233871E0)[&rate=7.090352910159318E-4]:2.614305780645E0,20[&rate=6.500135604880283E-4]:3.956263014515E0)[&rate=0.001188216554459461]:2.770039388427E1)[&rate=7.732081732316908E-4]:3.57432216027E1,(((30[&rate=5.407175082600761E-4]:5.425838053585E1,26[&rate=5.141122490362602E-4]:5.425838053585E1)[&rate=0.001274147349128285]:6.358344212722E0,32[&rate=4.0317894405439577E-4]:6.061672474857E1)[&rate=6.218805187054008E-4]:5.365347918135E0,((((4[&rate=3.3738117069304996E-4]:1.462545894205E0,3[&rate=8.843872271832056E-4]:1.462545894205E0)[&rate=8.44814349404329E-4]:4.898598475008E-2,2[&rate=5.674169733732039E-4]:1.511531878956E0)[&rate=0.0017331571253535554]:5.73507839957E0,5[&rate=3.5523645554179947E-4]:7.246610278526E0)[&rate=0.0027190733632002934]:1.02019123716E0,((6[&rate=0.001084059085312935]:6.039240334773E0,7[&rate=2.964009294232079E-4]:6.039240334773E0)[&rate=8.44814349404329E-4]:7.738652988934E-1,1[&rate=4.0317894405439577E-4]:6.813105633666E0)[&rate=8.44814349404329E-4]:1.45369588202E0)[&rate=5.141122490362602E-4]:5.771527115102E1)[&rate=4.602354359926559E-4]:1.417805834779E0)[&rate=6.500135604880283E-4]:1.367299532571E0)[&rate=0.0010258265761553685]:1.994573421387E0)[&rate=3.180011194706097E-4]:8.530114117867E-1,((((11[&rate=6.500135604880283E-4]:1.476092703484E1,29[&rate=0.001274147349128285]:1.476092703484E1)[&rate=6.218805187054008E-4]:5.35180454369E1,(33[&rate=5.674169733732039E-4]:6.214744283233E1,13[&rate=3.8790249416495063E-4]:6.214744283233E1)[&rate=5.674169733732039E-4]:6.131529639413E0)[&rate=2.395096849457106E-4]:1.17705878522E0,(19[&rate=7.732081732316908E-4]:1.97247441787E1,18[&rate=5.808647694148932E-4]:1.97247441787E1)[&rate=3.180011194706097E-4]:4.973128707826E1)[&rate=6.643869019699526E-4]:1.064786018358E0,((10[&rate=5.674169733732039E-4]:3.947276207218E1,31[&rate=6.218805187054008E-4]:3.947276207218E1)[&rate=5.540426047106384E-4]:2.963466331671E1,23[&rate=5.808647694148932E-4]:6.910742538889E1)[&rate=7.565703719147858E-4]:1.41339188643E0)[&rate=9.99216384659642E-4]:1.093945591912E0)[&rate=9.740110750474953E-4]:5.55415701324E-1,(17[&rate=0.001188216554459461]:4.68644512369E1,(27[&rate=4.602354359926559E-4]:2.679884166948E1,28[&rate=0.0012291027192541909]:2.679884166948E1)[&rate=0.001615432623779576]:2.006560956743E1)[&rate=3.3738117069304996E-4]:2.530572733165E1)[&rate=0.0014461054736281227]:4.383088445511E1); +tree STATE_130000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55134.29812699747,EEF_ucld_branchRates=-266.168517335019,lnP=-55134.29812699747,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.746466206254376E-4]:8.04342410646E0,9[&rate=0.0012317549071632617]:8.04342410646E0)[&rate=5.864869576651052E-4]:6.772822543536E0,15[&rate=7.864793919071311E-4]:1.481624665E1)[&rate=0.0010754468973270001]:8.767837692771E1,(14[&rate=0.001711629671016008]:3.468317771941E1,24[&rate=0.0010754468973270001]:3.468317771941E1)[&rate=0.0010754468973270001]:6.78114458583E1)[&rate=5.864869576651052E-4]:1.731282017968E1,(((25[&rate=6.204245512211303E-4]:7.741650799679E1,(12[&rate=7.304375649280302E-4]:7.661602892134E1,((16[&rate=7.864793919071311E-4]:3.401569308452E1,((22[&rate=0.0010455046652213318]:2.954821126741E0,21[&rate=5.64173362973324E-4]:2.954821126741E0)[&rate=5.195806974377646E-4]:2.164395789584E0,20[&rate=7.172956215957431E-4]:5.119216916325E0)[&rate=8.499974923057563E-4]:2.889647616819E1)[&rate=9.047551366418572E-4]:4.052142303988E1,(((30[&rate=6.09024914996524E-4]:5.814169228641E1,26[&rate=7.044394263810241E-4]:5.814169228641E1)[&rate=0.0010455046652213318]:7.520834143814E0,32[&rate=3.2811454106134884E-4]:6.566252643023E1)[&rate=3.0472402275699993E-4]:7.25591523416E0,((((4[&rate=9.047551366418572E-4]:1.551181400635E0,3[&rate=5.97718528602318E-4]:1.551181400635E0)[&rate=7.304375649280302E-4]:2.838064584064E-1,2[&rate=8.171107958677214E-4]:1.834987859042E0)[&rate=0.0013510180112044363]:5.676347810911E0,5[&rate=4.737239446888099E-4]:7.511335669953E0)[&rate=3.2811454106134884E-4]:1.336932703833E0,((6[&rate=9.459967613671627E-4]:6.510031892631E0,7[&rate=5.64173362973324E-4]:6.510031892631E0)[&rate=6.204245512211303E-4]:5.08381000173E-1,1[&rate=4.737239446888099E-4]:7.018412892804E0)[&rate=7.718786101049073E-4]:1.829855480981E0)[&rate=3.9660626545822797E-4]:6.40701732906E1)[&rate=5.64173362973324E-4]:1.618674460006E0)[&rate=0.0011445555996177478]:2.078912796946E0)[&rate=8.499974923057563E-4]:8.004790754527E-1)[&rate=9.248215828532215E-4]:1.462351933742E0,((((11[&rate=4.107212485472749E-4]:1.93938664652E1,29[&rate=5.195806974377646E-4]:1.93938664652E1)[&rate=6.319359021461921E-4]:5.493571917377E1,(33[&rate=6.435776683433503E-4]:6.835380783631E1,13[&rate=4.371143810774692E-4]:6.835380783631E1)[&rate=3.655666961847396E-4]:5.975777802661E0)[&rate=3.9660626545822797E-4]:1.822499942161E0,(19[&rate=4.737239446888099E-4]:2.173175789752E1,18[&rate=4.2417831370062276E-4]:2.173175789752E1)[&rate=6.794802360014019E-4]:5.442032768362E1)[&rate=9.248215828532215E-4]:1.428631940265E0,((10[&rate=5.5305257858064E-4]:3.71742858378E1,31[&rate=5.753115823265633E-4]:3.71742858378E1)[&rate=4.737239446888099E-4]:3.882370578792E1,23[&rate=5.419285262198658E-4]:7.599799162572E1)[&rate=0.0013510180112044363]:1.582725895679E0)[&rate=6.09024914996524E-4]:1.298142409133E0)[&rate=9.248215828532215E-4]:2.268417797542E0,(17[&rate=0.0010455046652213318]:5.978852780956E1,(27[&rate=7.864793919071311E-4]:2.34577512022E1,28[&rate=0.0012317549071632617]:2.34577512022E1)[&rate=7.718786101049073E-4]:3.633077660736E1)[&rate=3.2811454106134884E-4]:2.135874991852E1)[&rate=0.0020864102706770063]:3.866016602932E1); +tree STATE_140000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55123.318440039904,EEF_ucld_branchRates=-266.168517335019,lnP=-55123.318440039904,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.2610944757178773E-4]:8.100348835544E0,9[&rate=4.8259875059779186E-4]:8.100348835544E0)[&rate=4.0828215427904407E-4]:6.72393723696E0,15[&rate=5.474857071412316E-4]:1.48242860725E1)[&rate=8.362014938219918E-4]:1.105875018757E2,(14[&rate=0.00127461683461126]:3.924864519168E1,24[&rate=9.303422800834102E-4]:3.924864519168E1)[&rate=8.160472256127162E-4]:8.616314275655E1)[&rate=8.801768387971485E-4]:1.635560486929E-1,(((25[&rate=6.055075835468503E-4]:8.327359303646E1,(12[&rate=7.446361919617098E-4]:7.961203950595E1,(((30[&rate=4.403672785245958E-4]:6.082687648192E1,26[&rate=6.17781800624785E-4]:6.082687648192E1)[&rate=4.720305350992812E-4]:6.995817807679E0,32[&rate=3.390429813130828E-4]:6.78226942896E1)[&rate=3.8626697247211E-4]:9.163156356647E0,(((((4[&rate=6.303340564246787E-4]:9.993056958344E-1,3[&rate=6.983063769341877E-4]:9.993056958344E-1)[&rate=6.983063769341877E-4]:4.281548583529E-1,2[&rate=7.969214750817959E-4]:1.427460554187E0)[&rate=9.88993323069879E-4]:6.530793234915E0,5[&rate=2.432601331508061E-4]:7.958253789103E0)[&rate=0.00165826860150968]:1.293411598405E0,((6[&rate=8.160472256127162E-4]:6.657488055542E0,7[&rate=3.8626697247211E-4]:6.657488055542E0)[&rate=4.932069863011902E-4]:7.267305943586E-1,1[&rate=4.8259875059779186E-4]:7.3842186499E0)[&rate=3.973614792440707E-4]:1.867446737607E0)[&rate=5.038737913595232E-4]:6.695044356512E1,(16[&rate=5.364053040101712E-4]:3.970580945134E1,((22[&rate=8.362014938219918E-4]:2.241232121523E0,21[&rate=4.932069863011902E-4]:2.241232121523E0)[&rate=6.839032865688442E-4]:3.107858990106E0,20[&rate=2.641148844200462E-4]:5.349091111629E0)[&rate=0.0011501121147654823]:3.435671833971E1)[&rate=9.88993323069879E-4]:3.649629950128E1)[&rate=5.038737913595232E-4]:7.837416936232E-1)[&rate=9.584173679758075E-4]:2.626188859702E0)[&rate=2.819360972901464E-4]:3.661553530512E0)[&rate=6.983063769341877E-4]:2.027960023411E0,((((11[&rate=3.5142021644951545E-4]:1.618778659902E1,29[&rate=5.587146957332018E-4]:1.618778659902E1)[&rate=7.446361919617098E-4]:6.079227204316E1,(33[&rate=6.431914152875997E-4]:6.560727895047E1,13[&rate=3.124569259614268E-4]:6.560727895047E1)[&rate=9.88993323069879E-4]:1.137277969171E1)[&rate=9.88993323069879E-4]:7.666808259532E-1,(19[&rate=6.431914152875997E-4]:1.978889026477E1,18[&rate=4.614830385342161E-4]:1.978889026477E1)[&rate=2.641148844200462E-4]:5.795784920336E1)[&rate=0.0010225948282694883]:1.359538413507E0,((10[&rate=5.254551380993314E-4]:3.050589371877E1,31[&rate=5.038737913595232E-4]:3.050589371877E1)[&rate=4.2975347275224827E-4]:4.799651315925E1,23[&rate=5.254551380993314E-4]:7.850240687802E1)[&rate=0.00127461683461126]:6.038710036202E-1)[&rate=3.633598807069271E-4]:6.195275178231E0)[&rate=1.7387575287274755E-4]:4.690957498015E0,(17[&rate=6.983063769341877E-4]:6.705210370777E1,(27[&rate=3.124569259614268E-4]:2.96027937904E1,28[&rate=0.001206508413483346]:2.96027937904E1)[&rate=7.787079174828098E-4]:3.744930991737E1)[&rate=5.474857071412316E-4]:2.294040685012E1)[&rate=0.0020667660093677334]:3.558283343905E1); +tree STATE_150000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.98063991054,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.98063991054,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.661735128331768E-4]:7.200051163198E0,9[&rate=5.796657031877729E-4]:7.200051163198E0)[&rate=6.101319383284094E-4]:6.112187999569E0,15[&rate=7.869261066120358E-4]:1.331223916277E1)[&rate=7.089347965826835E-4]:1.073855653225E2,(14[&rate=0.0011275459807763462]:4.255307530427E1,24[&rate=9.951857149870663E-4]:4.255307530427E1)[&rate=9.696615496840445E-4]:7.814472918097E1)[&rate=7.461951935550931E-4]:3.029229338476E-1,((((12[&rate=8.166006596151494E-4]:7.535763898988E1,((16[&rate=5.196524268235083E-4]:3.4696837776E1,((22[&rate=0.0010538835846029863]:1.967262779693E0,21[&rate=5.496624879427196E-4]:1.967262779693E0)[&rate=3.8361518639765905E-4]:3.363979701499E0,20[&rate=0.0011730999155698592]:5.331242481191E0)[&rate=0.001526202845367975]:2.936559529481E1)[&rate=6.631589777639994E-4]:3.964779394286E1,(((30[&rate=4.571856033097431E-4]:5.701630741736E1,26[&rate=5.9989760157916E-4]:5.701630741736E1)[&rate=8.844059633217363E-4]:6.817733792728E0,32[&rate=5.69635397676367E-4]:6.383404121009E1)[&rate=5.69635397676367E-4]:8.461248649404E0,((((4[&rate=4.993731107900506E-4]:1.12034774026E0,3[&rate=5.496624879427196E-4]:1.12034774026E0)[&rate=6.101319383284094E-4]:3.448786200057E-1,2[&rate=9.696615496840445E-4]:1.465226360266E0)[&rate=7.210293230858545E-4]:7.358230917016E0,5[&rate=5.596400446877393E-4]:8.823457277282E0)[&rate=8.844059633217363E-4]:2.091051171275E0,((6[&rate=6.101319383284094E-4]:6.011406081421E0,7[&rate=6.74261616478531E-4]:6.011406081421E0)[&rate=3.974315495277633E-4]:9.583273343074E-1,1[&rate=5.396848465667537E-4]:6.969733415729E0)[&rate=8.488649392876873E-4]:3.944775032828E0)[&rate=5.796657031877729E-4]:6.138078141094E1)[&rate=0.0012957717983381023]:2.04934185937E0)[&rate=9.241928554656191E-4]:1.013007271013E0)[&rate=2.36207149547626E-4]:1.451614008422E0,25[&rate=6.74261616478531E-4]:7.68092529983E1)[&rate=3.5234113298198284E-4]:2.327745009572E0,((((11[&rate=9.696615496840445E-4]:1.600230790785E1,29[&rate=4.680232692012413E-4]:1.600230790785E1)[&rate=8.166006596151494E-4]:5.806983411195E1,(33[&rate=7.461951935550931E-4]:6.260878591844E1,13[&rate=7.461951935550931E-4]:6.260878591844E1)[&rate=6.97126026886174E-4]:1.146335610137E1)[&rate=9.951857149870663E-4]:9.760147056893E-1,(19[&rate=4.571856033097431E-4]:2.061925981037E1,18[&rate=3.1185090053537795E-4]:2.061925981037E1)[&rate=3.974315495277633E-4]:5.442889691513E1)[&rate=4.993731107900506E-4]:1.321027580466E0,((10[&rate=5.596400446877393E-4]:2.835243059665E1,31[&rate=4.227862802895817E-4]:2.835243059665E1)[&rate=4.680232692012413E-4]:4.506686553035E1,23[&rate=4.104284077547285E-4]:7.341929612699E1)[&rate=8.166006596151494E-4]:2.949888178968E0)[&rate=3.338116805306386E-4]:2.767813701912E0)[&rate=3.5234113298198284E-4]:2.371931254467E0,(17[&rate=7.461951935550931E-4]:6.278316597336E1,(27[&rate=4.3463622424792423E-4]:2.608148051698E1,28[&rate=0.0011730999155698592]:2.608148051698E1)[&rate=8.661735128331768E-4]:3.670168545637E1)[&rate=5.897476354089268E-4]:1.872576328899E1)[&rate=0.001831205204481909]:3.949179815675E1); +tree STATE_160000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.75580591052,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.75580591052,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.824455627927049E-4]:7.867764442474E0,9[&rate=6.402153488815005E-4]:7.867764442474E0)[&rate=7.641528637189284E-4]:6.343413699021E0,15[&rate=8.5266050372664E-4]:1.42111781415E1)[&rate=9.91902794076929E-4]:1.014793076308E2,(14[&rate=0.0013594116335973962]:3.829691063104E1,24[&rate=0.0010980522110993326]:3.829691063104E1)[&rate=6.596594717041985E-4]:7.739357514127E1)[&rate=5.32726662891603E-4]:7.008857842355E0,((((12[&rate=6.596594717041985E-4]:7.342462307595E1,((16[&rate=5.529925968305623E-4]:3.727857587853E1,((22[&rate=0.0011729994848383122]:2.909702121841E0,21[&rate=3.65325935640224E-4]:2.909702121841E0)[&rate=0.0011729994848383122]:2.386712362126E0,20[&rate=6.209518513467057E-4]:5.296414483967E0)[&rate=0.0010148559622323232]:3.198216139457E1)[&rate=8.123493762691244E-4]:3.434722366402E1,(((30[&rate=0.001067377948496144]:5.056317876345E1,26[&rate=5.921132016512052E-4]:5.056317876345E1)[&rate=7.757207443273851E-4]:7.793152220792E0,32[&rate=4.5228115926014724E-4]:5.835633098424E1)[&rate=4.384080967849413E-4]:1.095223370447E1,((((4[&rate=8.980740968515023E-4]:1.195171970497E0,3[&rate=7.875877751997311E-4]:1.195171970497E0)[&rate=4.893584365132644E-4]:2.219250265272E-1,2[&rate=7.098846457950602E-4]:1.417096997024E0)[&rate=6.402153488815005E-4]:9.025604212787E0,5[&rate=7.30971336848409E-4]:1.044270120981E1)[&rate=9.146978522877077E-4]:1.972789163122E0,((6[&rate=9.146978522877077E-4]:6.010296827269E0,7[&rate=5.116444218613898E-4]:6.010296827269E0)[&rate=0.0010148559622323232]:8.169978839836E-1,1[&rate=4.7759183618057224E-4]:6.827294711253E0)[&rate=6.305688617858878E-4]:5.588195661681E0)[&rate=6.017411738826939E-4]:5.689307431578E1)[&rate=0.0012208749425730817]:2.317234853843E0)[&rate=7.098846457950602E-4]:1.798823533401E0)[&rate=5.72718056266018E-4]:2.15950139451E0,25[&rate=7.528555993915447E-4]:7.558412447046E1)[&rate=0.0010148559622323232]:1.28591538744E0,((((33[&rate=7.203386706081952E-4]:6.280888601594E1,13[&rate=2.8605343579427814E-4]:6.280888601594E1)[&rate=9.508334541075798E-4]:8.53618633938E0,(11[&rate=8.980740968515023E-4]:1.613025068891E1,29[&rate=6.113481975514503E-4]:1.613025068891E1)[&rate=7.875877751997311E-4]:5.521482166641E1)[&rate=4.5228115926014724E-4]:1.063108370191E0,(19[&rate=3.8788470856292623E-4]:2.171993321008E1,18[&rate=6.499070415665478E-4]:2.171993321008E1)[&rate=4.067806698673774E-4]:5.068824751543E1)[&rate=4.067806698673774E-4]:1.752469949262E0,((10[&rate=5.116444218613898E-4]:3.092008089614E1,31[&rate=8.5266050372664E-4]:3.092008089614E1)[&rate=5.22308428272849E-4]:4.302707914022E1,23[&rate=5.529925968305623E-4]:7.394716003636E1)[&rate=6.499070415665478E-4]:2.134906384118E-1)[&rate=9.91902794076929E-4]:2.709389183132E0)[&rate=4.6527879619762277E-4]:4.158893385395E0,(17[&rate=8.387388181503878E-4]:6.946758925694E1,(27[&rate=6.113481975514503E-4]:3.224376474698E1,28[&rate=7.875877751997311E-4]:3.224376474698E1)[&rate=8.822539686963805E-4]:3.722382450996E1)[&rate=6.596594717041985E-4]:1.156134398636E1)[&rate=0.0014788243651665447]:4.167041037137E1); +tree STATE_170000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.15054391887,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.15054391887,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.169785003770666E-4]:6.275023473099E0,9[&rate=0.0011767149150951266]:6.275023473099E0)[&rate=2.5877370397720906E-4]:7.439866477267E0,15[&rate=8.036054259999365E-4]:1.371488995037E1)[&rate=5.116712643444549E-4]:1.005036330374E2,(14[&rate=0.0015157498640260567]:4.354625269009E1,24[&rate=7.843709375658145E-4]:4.354625269009E1)[&rate=8.94388397658379E-4]:7.067227029765E1)[&rate=6.464058805509248E-4]:1.471212862019E1,((((12[&rate=6.730243735425846E-4]:7.61462570504E1,((16[&rate=3.934940920067881E-4]:3.932847714767E1,((22[&rate=6.213585770766644E-4]:2.731295540807E0,21[&rate=3.169785003770666E-4]:2.731295540807E0)[&rate=6.594995872758855E-4]:3.418579859969E0,20[&rate=7.843709375658145E-4]:6.149875400776E0)[&rate=0.0010659059883086491]:3.317860174689E1)[&rate=8.94388397658379E-4]:3.494309149865E1,(((30[&rate=7.488861719714275E-4]:5.063368209812E1,26[&rate=4.8177765386468724E-4]:5.063368209812E1)[&rate=0.0011767149150951266]:1.113979238743E1,32[&rate=3.169785003770666E-4]:6.177347448555E1)[&rate=3.169785003770666E-4]:8.883312985776E0,((((3[&rate=9.853593865137582E-4]:1.326594782768E0,4[&rate=4.3297381606809593E-4]:1.326594782768E0)[&rate=5.116712643444549E-4]:4.391132884078E-1,2[&rate=8.691650131226814E-4]:1.765708071175E0)[&rate=4.3297381606809593E-4]:9.844306320623E0,5[&rate=2.5877370397720906E-4]:1.16100143918E1)[&rate=7.843709375658145E-4]:9.663953980673E-1,((6[&rate=4.719601253340357E-4]:7.002733705068E0,7[&rate=5.218373345783734E-4]:7.002733705068E0)[&rate=9.519435728172452E-4]:1.384630267534E0,1[&rate=2.7555366174047735E-4]:8.387363972601E0)[&rate=4.133861775722541E-4]:4.189045817265E0)[&rate=6.337039546172656E-4]:5.808037768146E1)[&rate=7.488861719714275E-4]:3.614781174997E0)[&rate=5.016168841204603E-4]:1.874688404081E0)[&rate=4.427138239185881E-4]:1.426946593472E0,25[&rate=4.916577810433959E-4]:7.757320364387E1)[&rate=2.905053370477468E-4]:1.152286625248E0,((((33[&rate=5.749480033897214E-4]:6.55344732844E1,13[&rate=4.133861775722541E-4]:6.55344732844E1)[&rate=3.625361247172029E-4]:6.792717937424E0,(11[&rate=5.116712643444549E-4]:1.444295254262E1,29[&rate=6.093379574449178E-4]:1.444295254262E1)[&rate=7.324101624139124E-4]:5.78842386792E1)[&rate=6.870243613263019E-4]:6.06250575531E-1,(19[&rate=9.218268998639527E-4]:1.728703357634E1,18[&rate=6.594995872758855E-4]:1.728703357634E1)[&rate=3.290658292973697E-4]:5.564640822101E1)[&rate=9.218268998639527E-4]:1.679621406917E0,((10[&rate=3.625361247172029E-4]:3.302457375281E1,31[&rate=5.116712643444549E-4]:3.302457375281E1)[&rate=5.861580001509899E-4]:4.084757845182E1,23[&rate=3.8336158843056304E-4]:7.387215220464E1)[&rate=4.621885405822849E-4]:7.409109996344E-1)[&rate=1.7307246631544288E-4]:4.112427064853E0)[&rate=4.719601253340357E-4]:5.609412649868E0,(17[&rate=7.324101624139124E-4]:6.777779553028E1,(27[&rate=3.730570130914026E-4]:3.175029513463E1,28[&rate=9.853593865137582E-4]:3.175029513463E1)[&rate=5.749480033897214E-4]:3.602750039565E1)[&rate=4.719601253340357E-4]:1.655710738871E1)[&rate=0.001356216910607438]:4.459574868894E1); +tree STATE_180000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.35037548495,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.35037548495,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.069668153637177E-4]:6.714985372764E0,9[&rate=6.859657531826749E-4]:6.714985372764E0)[&rate=9.892101202977563E-4]:5.43614102641E0,15[&rate=8.255446388651048E-4]:1.215112639917E1)[&rate=7.651252470654687E-4]:9.869532561275E1,(14[&rate=0.0012930216045079974]:4.022137938717E1,24[&rate=8.85328111926983E-4]:4.022137938717E1)[&rate=9.643145889227475E-4]:7.062507262475E1)[&rate=7.236317317086348E-4]:1.857999633904E1,((((12[&rate=7.878913541582153E-4]:7.356186371882E1,((16[&rate=4.6774649464420873E-4]:4.105513177496E1,((22[&rate=6.254551237569587E-4]:2.10035813615E0,21[&rate=4.8804291954564243E-4]:2.10035813615E0)[&rate=6.171302042753336E-4]:3.856226763855E0,20[&rate=5.160550987388552E-4]:5.956584900005E0)[&rate=9.027471316429299E-4]:3.509854687495E1)[&rate=9.027471316429299E-4]:3.069175471799E1,(((((3[&rate=7.236317317086348E-4]:1.716942478732E0,4[&rate=0.0010497490039937745]:1.716942478732E0)[&rate=6.171302042753336E-4]:3.438959384494E-1,2[&rate=5.840904641127273E-4]:2.060838417181E0)[&rate=7.04414000307513E-4]:9.278667711341E0,5[&rate=3.879042923348495E-4]:1.133950612852E1)[&rate=0.0010173269936536503]:1.338647691351E0,((6[&rate=5.840904641127273E-4]:6.695519430183E0,7[&rate=4.196997035122528E-4]:6.695519430183E0)[&rate=6.171302042753336E-4]:4.573586795316E-1,1[&rate=3.879042923348495E-4]:7.152878109715E0)[&rate=0.0011986986719152595]:5.525275710157E0)[&rate=6.951035874047276E-4]:5.715173923581E1,((30[&rate=5.591879431259729E-4]:4.496536325407E1,26[&rate=4.8804291954564243E-4]:4.496536325407E1)[&rate=7.335832558379404E-4]:1.496066468528E1,32[&rate=4.4538499626940096E-4]:5.992602793935E1)[&rate=5.840904641127273E-4]:9.903865116335E0)[&rate=5.675310954847338E-4]:1.916993437267E0)[&rate=0.00108821617468898]:1.814977225869E0)[&rate=5.069668153637177E-4]:2.743098428717E0,25[&rate=7.139163545816414E-4]:7.630496214754E1)[&rate=8.255446388651048E-4]:5.56409749056E-1,((((33[&rate=5.507790842033913E-4]:6.14531445136E1,13[&rate=3.4073626009219936E-4]:6.14531445136E1)[&rate=7.437964788721898E-4]:9.175564111264E0,(11[&rate=5.336832498169262E-4]:1.46206559831E1,29[&rate=9.419190753606748E-4]:1.46206559831E1)[&rate=8.392794803652022E-4]:5.600805264177E1)[&rate=6.254551237569587E-4]:8.293993035146E-1,(19[&rate=5.923385741305409E-4]:1.961805925358E1,18[&rate=9.419190753606748E-4]:1.961805925358E1)[&rate=4.4538499626940096E-4]:5.18400486748E1)[&rate=4.4538499626940096E-4]:2.523225861331E0,((10[&rate=5.923385741305409E-4]:3.274144328184E1,31[&rate=5.336832498169262E-4]:3.274144328184E1)[&rate=6.171302042753336E-4]:4.062264194469E1,23[&rate=5.758264381266342E-4]:7.336408522653E1)[&rate=6.681373474811415E-4]:6.172485631846E-1)[&rate=8.12450057074194E-4]:2.880038106882E0)[&rate=8.255446388651048E-4]:4.318072139196E0,(17[&rate=7.878913541582153E-4]:7.096252656472E1,(27[&rate=4.5688341833617673E-4]:3.115468827752E1,28[&rate=8.12450057074194E-4]:3.115468827752E1)[&rate=6.681373474811415E-4]:3.980783828721E1)[&rate=4.0486380921914773E-4]:1.021691747106E1)[&rate=9.215189467659218E-4]:4.824700431518E1); +tree STATE_190000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55149.561119774386,EEF_ucld_branchRates=-266.168517335019,lnP=-55149.561119774386,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.572993396765939E-4]:5.505005752993E0,9[&rate=0.001314431524248791]:5.505005752993E0)[&rate=8.980387222118892E-4]:7.12719348326E0,15[&rate=4.920816587460045E-4]:1.263219923625E1)[&rate=0.0010451061015016208]:9.920698926142E1,(14[&rate=0.0016672886914391829]:4.006465414993E1,24[&rate=7.488340791279559E-4]:4.006465414993E1)[&rate=0.0012507913665202933]:7.177453434775E1)[&rate=7.630718973450828E-4]:1.7468908156E1,((((12[&rate=9.889311729991438E-4]:7.087270081092E1,((16[&rate=5.681805905795045E-4]:3.521822998201E1,((22[&rate=8.784550886155315E-4]:1.892907066149E0,21[&rate=3.16932481031131E-4]:1.892907066149E0)[&rate=6.012313844654546E-4]:4.76919154269E0,20[&rate=6.012313844654546E-4]:6.662098608839E0)[&rate=0.0011524215512927632]:2.855613137317E1)[&rate=7.630718973450828E-4]:3.415307763883E1,(((((3[&rate=6.708127337021204E-4]:1.440761948291E0,4[&rate=7.630718973450828E-4]:1.440761948291E0)[&rate=3.834607080615985E-4]:3.242118256898E-1,2[&rate=0.0011524215512927632]:1.764973773981E0)[&rate=9.889311729991438E-4]:9.301298814712E0,5[&rate=4.228359048035693E-4]:1.106627258869E1)[&rate=6.708127337021204E-4]:2.467137023099E0,((6[&rate=5.030517664148638E-4]:6.413333194026E0,7[&rate=4.468545396379687E-4]:6.413333194026E0)[&rate=0.0011524215512927632]:8.008054534423E-1,1[&rate=6.956203650613935E-4]:7.214138647469E0)[&rate=6.237848293437563E-4]:6.319270964323E0)[&rate=7.777604363314366E-4]:5.492304856248E1,((30[&rate=5.681805905795045E-4]:4.913592897572E1,26[&rate=5.24801397677853E-4]:4.913592897572E1)[&rate=8.784550886155315E-4]:1.002052809247E1,32[&rate=3.834607080615985E-4]:5.915645706819E1)[&rate=6.012313844654546E-4]:9.300001106084E0)[&rate=7.084307973777946E-4]:9.148494465707E-1)[&rate=8.980387222118892E-4]:1.50139319008E0)[&rate=3.834607080615985E-4]:3.938305772888E0,25[&rate=4.1025951948710226E-4]:7.481100658381E1)[&rate=5.464553397578726E-4]:2.225018677924E0,((((19[&rate=8.086816101750834E-4]:1.524906547617E1,18[&rate=0.0010771435227063914]:1.524906547617E1)[&rate=3.5330303348156275E-4]:5.617506743027E1,(11[&rate=2.6504611127825675E-4]:1.442643517268E1,29[&rate=0.0010451061015016208]:1.442643517268E1)[&rate=6.956203650613935E-4]:5.699769773375E1)[&rate=5.139498957677555E-4]:1.149831024072E0,(33[&rate=8.784550886155315E-4]:6.311320361835E1,13[&rate=5.356294038589408E-4]:6.311320361835E1)[&rate=4.3500816976625956E-4]:9.46076031216E0)[&rate=8.420487940762542E-4]:1.060042887036E0,((10[&rate=5.681805905795045E-4]:2.918318934938E1,31[&rate=3.16932481031131E-4]:2.918318934938E1)[&rate=5.356294038589408E-4]:4.319439423882E1,23[&rate=6.124440612546814E-4]:7.23775835882E1)[&rate=4.468545396379687E-4]:1.256423229345E0)[&rate=3.5330303348156275E-4]:3.402018444195E0)[&rate=6.012313844654546E-4]:3.081922972457E0,(17[&rate=0.001314431524248791]:7.017612729156E1,(27[&rate=4.698089341054181E-4]:3.11431849238E1,28[&rate=8.980387222118892E-4]:3.11431849238E1)[&rate=8.980387222118892E-4]:3.903294236776E1)[&rate=4.468545396379687E-4]:9.941820942632E0)[&rate=0.0011126185369374519]:4.919014841949E1); +tree STATE_200000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55141.902525003155,EEF_ucld_branchRates=-266.168517335019,lnP=-55141.902525003155,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.2840456767154552E-4]:5.231732057215E0,9[&rate=0.0012881658051684666]:5.231732057215E0)[&rate=0.0011680182391395353]:6.109876481306E0,15[&rate=4.674192370856951E-4]:1.134160853852E1)[&rate=7.135597468410573E-4]:9.622712768796E1,(14[&rate=0.001816269024628164]:3.796764887483E1,24[&rate=8.443641593067688E-4]:3.796764887483E1)[&rate=0.0011680182391395353]:6.960108735165E1)[&rate=5.486271654377733E-4]:1.468085595499E1,((((((((3[&rate=8.230069777534221E-4]:1.36069620453E0,4[&rate=7.135597468410573E-4]:1.36069620453E0)[&rate=0.001039217870186094]:5.110874375789E-1,2[&rate=3.398445336772274E-4]:1.871783642108E0)[&rate=3.269329714859615E-4]:8.272751369889E0,5[&rate=2.842429772042829E-4]:1.0144535012E1)[&rate=0.0011680182391395353]:2.883234179985E0,((6[&rate=4.7873406534047226E-4]:7.091808419117E0,7[&rate=7.135597468410573E-4]:7.091808419117E0)[&rate=5.607924618288186E-4]:1.424896629274E0,1[&rate=3.5233428340514385E-4]:8.516705048392E0)[&rate=2.67871584525977E-4]:4.511064143591E0)[&rate=6.116945312883471E-4]:5.781751380749E1,(12[&rate=8.443641593067688E-4]:6.992698604769E1,(((30[&rate=7.135597468410573E-4]:4.935937908549E1,26[&rate=6.388312675269546E-4]:4.935937908549E1)[&rate=3.8807988955414426E-4]:1.51652202045E1,32[&rate=3.996139446437287E-4]:6.452459928999E1)[&rate=9.434966702719397E-4]:4.049177009224E0,(16[&rate=3.5233428340514385E-4]:3.402618859658E1,((22[&rate=6.116945312883471E-4]:2.263957669001E0,21[&rate=4.44895479007152E-4]:2.263957669001E0)[&rate=0.0010774105430855503]:4.107494257039E0,20[&rate=4.674192370856951E-4]:6.37145192604E0)[&rate=8.669133504523163E-4]:2.765473667054E1)[&rate=8.443641593067688E-4]:3.454758770264E1)[&rate=8.443641593067688E-4]:1.353209748477E0)[&rate=0.0011199607122206704]:9.182969517822E-1)[&rate=6.251000069946493E-4]:5.01668304958E0,25[&rate=5.366424540969142E-4]:7.586196604905E1)[&rate=4.110301971814132E-4]:2.285646865255E0,((((33[&rate=0.001039217870186094]:6.372872196584E1,13[&rate=3.763882647605611E-4]:6.372872196584E1)[&rate=4.901117559339325E-4]:6.602250746446E0,(11[&rate=4.44895479007152E-4]:1.49272575072E1,29[&rate=5.366424540969142E-4]:1.49272575072E1)[&rate=7.648339863457021E-4]:5.540371520508E1)[&rate=3.763882647605611E-4]:2.109368911896E0,(19[&rate=7.300088986675004E-4]:1.52963809467E1,18[&rate=3.644920268052331E-4]:1.52963809467E1)[&rate=5.486271654377733E-4]:5.714396067748E1)[&rate=4.561468431938617E-4]:2.645634066441E0,((10[&rate=4.7873406534047226E-4]:3.002147563426E1,31[&rate=5.015720825625301E-4]:3.002147563426E1)[&rate=5.248181099242461E-4]:4.205603612193E1,23[&rate=2.67871584525977E-4]:7.20775117562E1)[&rate=9.728041968225667E-4]:3.008463934423E0)[&rate=6.529190538684609E-4]:3.06163722369E0)[&rate=2.842429772042829E-4]:3.26555905028E0,(17[&rate=8.669133504523163E-4]:7.161740667615E1,(27[&rate=3.134814777066983E-4]:3.708351707226E1,28[&rate=8.443641593067688E-4]:3.708351707226E1)[&rate=0.0012881658051684666]:3.453388960388E1)[&rate=5.131344434923628E-4]:9.795765288441E0)[&rate=0.0013668940818854544]:4.083642021688E1); +tree STATE_210000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55166.88427655368,EEF_ucld_branchRates=-266.168517335019,lnP=-55166.88427655368,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=9.403497652015867E-4]:7.125514085453E0,9[&rate=5.754638257771231E-4]:7.125514085453E0)[&rate=0.0010061467203073883]:5.982133120292E0,15[&rate=4.814710385174394E-4]:1.310764720574E1)[&rate=8.215831553054026E-4]:1.035514314486E2,(14[&rate=0.0012990979517981853]:4.028340002002E1,24[&rate=9.819726378598413E-4]:4.028340002002E1)[&rate=0.0011020144350151356]:7.63756786343E1)[&rate=7.768173482792226E-4]:1.032990645166E1,((((12[&rate=7.984290069522296E-4]:7.45863922452E1,((16[&rate=8.466757429949792E-4]:3.47171588937E1,((22[&rate=8.338574553602891E-4]:2.984439773605E0,21[&rate=4.814710385174394E-4]:2.984439773605E0)[&rate=6.414324736315858E-4]:1.803339242202E0,20[&rate=9.050815687247342E-4]:4.787779015808E0)[&rate=0.0011020144350151356]:2.992937987789E1)[&rate=0.0010648162507261559]:3.499245088457E1,(((30[&rate=8.215831553054026E-4]:4.686331256613E1,26[&rate=6.414324736315858E-4]:4.686331256613E1)[&rate=5.921520656555687E-4]:1.494706838632E1,32[&rate=5.027824786500935E-4]:6.181038095245E1)[&rate=5.754638257771231E-4]:7.554808991523E0,((((3[&rate=8.891967060939167E-4]:1.209243337791E0,4[&rate=5.223743384944336E-4]:1.209243337791E0)[&rate=5.407969266303956E-4]:4.525943889211E-1,2[&rate=7.564482285521532E-4]:1.661837726712E0)[&rate=4.290246758333921E-4]:9.833115123487E0,5[&rate=4.440121809031983E-4]:1.14949528502E1)[&rate=9.602016652433069E-4]:1.165753102795E0,((6[&rate=9.403497652015867E-4]:7.316210796953E0,7[&rate=5.496866287463571E-4]:7.316210796953E0)[&rate=8.466757429949792E-4]:4.767948424814E-1,1[&rate=4.57503768235136E-4]:7.793005639434E0)[&rate=5.317061821146142E-4]:4.86770031356E0)[&rate=6.004074244458451E-4]:5.670448399098E1)[&rate=7.006598315556478E-4]:3.444198343011E-1)[&rate=7.466542732107405E-4]:4.876782466927E0)[&rate=8.466757429949792E-4]:1.859200329539E0,25[&rate=8.466757429949792E-4]:7.644559257474E1)[&rate=5.223743384944336E-4]:1.395076686239E0,((((33[&rate=6.168238155879418E-4]:6.055358402633E1,13[&rate=4.440121809031983E-4]:6.055358402633E1)[&rate=6.250148627501092E-4]:9.929334227146E0,(11[&rate=5.317061821146142E-4]:1.362042426684E1,29[&rate=6.332132590804092E-4]:1.362042426684E1)[&rate=7.66493403461463E-4]:5.686249398663E1)[&rate=6.414324736315858E-4]:1.394035564814E0,(19[&rate=7.095279386533697E-4]:1.693586895801E1,18[&rate=6.579859734400804E-4]:1.693586895801E1)[&rate=5.921520656555687E-4]:5.494108486028E1)[&rate=5.027824786500935E-4]:1.896523072414E0,((10[&rate=7.18543259021527E-4]:2.461810037728E1,31[&rate=7.095279386533697E-4]:2.461810037728E1)[&rate=6.168238155879418E-4]:4.796396761081E1,23[&rate=5.838435412831376E-4]:7.258206798809E1)[&rate=0.0010334152821733571]:1.191408902612E0)[&rate=6.919226255244917E-4]:4.067192370279E0)[&rate=6.496856920736671E-4]:3.857010621322E0,(17[&rate=8.338574553602891E-4]:7.359405686776E1,(27[&rate=3.639382119659714E-4]:3.62244452802E1,28[&rate=7.564482285521532E-4]:3.62244452802E1)[&rate=4.290246758333921E-4]:3.736961158756E1)[&rate=6.004074244458451E-4]:8.103623014542E0)[&rate=0.0010061467203073883]:4.529130522368E1); +tree STATE_220000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55184.3263401491,EEF_ucld_branchRates=-266.168517335019,lnP=-55184.3263401491,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.322120967433617E-4]:8.907592453281E0,9[&rate=5.314265329044074E-4]:8.907592453281E0)[&rate=5.970665925817025E-4]:4.33579993532E0,15[&rate=9.428673317003838E-4]:1.32433923886E1)[&rate=6.25145857237087E-4]:9.545812443774E1,(14[&rate=9.0119060163014E-4]:3.935559155928E1,24[&rate=9.980767070189194E-4]:3.935559155928E1)[&rate=6.322120967433617E-4]:6.934592526706E1)[&rate=9.980767070189194E-4]:1.992070150292E1,(((((16[&rate=4.4629202265586903E-4]:4.05410848016E1,((22[&rate=6.758679055374136E-4]:2.751115973015E0,21[&rate=5.900356125724115E-4]:2.751115973015E0)[&rate=6.181094171239115E-4]:2.237340472837E0,20[&rate=5.541562575400319E-4]:4.988456445851E0)[&rate=9.980767070189194E-4]:3.555262835575E1)[&rate=0.0011545933210430717]:2.953159026831E1,((((30[&rate=7.236970642734767E-4]:5.186190941227E1,26[&rate=7.797355607699364E-4]:5.186190941227E1)[&rate=7.597772919118968E-4]:4.816319124715E0,32[&rate=5.23509484152536E-4]:5.667822853698E1)[&rate=7.411894208790886E-4]:1.086920743395E1,((((2[&rate=5.614801437046695E-4]:1.154173031693E0,4[&rate=6.110916474868733E-4]:1.154173031693E0)[&rate=8.253820671971734E-4]:3.859866548698E-1,3[&rate=5.758729774769359E-4]:1.540159686563E0)[&rate=5.970665925817025E-4]:8.160097809919E0,5[&rate=5.758729774769359E-4]:9.700257496482E0)[&rate=8.672863660335736E-4]:2.289458457307E0,((6[&rate=7.152934214307366E-4]:7.79897262217E0,7[&rate=4.3292798758698544E-4]:7.79897262217E0)[&rate=8.014324952179148E-4]:1.205316166171E0,1[&rate=6.609985213212971E-4]:9.004288788341E0)[&rate=6.834657901247808E-4]:2.985427165449E0)[&rate=5.153663085145727E-4]:5.555772001714E1)[&rate=7.903388112284038E-4]:1.351818509938E0,12[&rate=8.834778850922144E-4]:6.889925448087E1)[&rate=6.040812445371928E-4]:1.173420589043E0)[&rate=6.758679055374136E-4]:4.965437594446E0,25[&rate=8.253820671971734E-4]:7.503811266436E1)[&rate=4.794716450055517E-4]:1.937946451279E0,((((33[&rate=9.20805847449019E-4]:6.10125463478E1,13[&rate=4.175574113118777E-4]:6.10125463478E1)[&rate=7.411894208790886E-4]:6.790587172369E0,(11[&rate=4.982153036756249E-4]:1.689185061018E1,29[&rate=5.153663085145727E-4]:1.689185061018E1)[&rate=5.687131542715961E-4]:5.091128290999E1)[&rate=4.582779842927611E-4]:1.41022904087E0,(19[&rate=6.758679055374136E-4]:1.362528272662E1,18[&rate=5.23509484152536E-4]:1.362528272662E1)[&rate=4.982153036756249E-4]:5.558807983442E1)[&rate=4.3292798758698544E-4]:3.962804657411E0,((10[&rate=7.695647745905365E-4]:2.180443190196E1,31[&rate=3.7424029080368026E-4]:2.180443190196E1)[&rate=5.758729774769359E-4]:5.026993545673E1,23[&rate=4.890845006064249E-4]:7.207436735869E1)[&rate=7.236970642734767E-4]:1.101799859764E0)[&rate=7.797355607699364E-4]:3.799891897188E0)[&rate=6.322120967433617E-4]:3.719576331211E0,(17[&rate=7.152934214307366E-4]:7.440394799407E1,(27[&rate=5.687131542715961E-4]:3.740539978764E1,28[&rate=7.903388112284038E-4]:3.740539978764E1)[&rate=9.20805847449019E-4]:3.699854820643E1)[&rate=7.695647745905365E-4]:6.291687452778E0)[&rate=9.0119060163014E-4]:4.792658288241E1); +tree STATE_230000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55159.65897810424,EEF_ucld_branchRates=-266.168517335019,lnP=-55159.65897810424,RHOD_ucld_branchRates=-266.168517335019] = [&R] 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+tree STATE_240000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55126.51021728988,EEF_ucld_branchRates=-266.168517335019,lnP=-55126.51021728988,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.25069311718167E-4]:8.101618852824E0,9[&rate=7.59266885070794E-4]:8.101618852824E0)[&rate=5.831058069093626E-4]:5.53578401332E0,15[&rate=7.336529429660322E-4]:1.363740286614E1)[&rate=8.162450938946277E-4]:1.064239985842E2,(14[&rate=0.0010977069942727227]:4.516022942591E1,24[&rate=8.011462784104569E-4]:4.516022942591E1)[&rate=0.0011927129686618604]:7.490117202445E1)[&rate=9.717460189174929E-4]:9.582260857274E0,(((((((11[&rate=4.328881382597832E-4]:1.757943633638E1,29[&rate=5.733737307587217E-4]:1.757943633638E1)[&rate=0.0011927129686618604]:4.671868000305E1,(33[&rate=6.754197975770078E-4]:5.486704470497E1,13[&rate=4.653168856384377E-4]:5.486704470497E1)[&rate=3.5268948694546127E-4]:9.431071634457E0)[&rate=2.8517223479548355E-4]:4.05309694742E0,(19[&rate=8.84444934422169E-4]:1.485643678232E1,18[&rate=6.027706705812798E-4]:1.485643678232E1)[&rate=5.347396819598798E-4]:5.349477650452E1)[&rate=6.865240359857905E-4]:3.139337345853E0,((10[&rate=3.6868247645289694E-4]:2.417539286392E1,31[&rate=6.12735028842102E-4]:2.417539286392E1)[&rate=5.636874732979451E-4]:4.645415031941E1,23[&rate=6.228086983822656E-4]:7.062954318332E1)[&rate=7.462598424077541E-4]:8.610074493736E-1)[&rate=4.857388906483284E-4]:1.719424686232E0,25[&rate=8.660153285834026E-4]:7.320997531893E1)[&rate=6.228086983822656E-4]:8.351643741549E-1,(12[&rate=0.0010604427987882855]:7.176974043274E1,((((30[&rate=4.957164843973707E-4]:4.762021907786E1,26[&rate=6.865240359857905E-4]:4.762021907786E1)[&rate=8.162450938946277E-4]:1.005595275945E1,32[&rate=5.636874732979451E-4]:5.76761718373E1)[&rate=4.328881382597832E-4]:1.094961027762E1,((((3[&rate=8.162450938946277E-4]:2.159714039289E0,4[&rate=0.0010604427987882855]:2.159714039289E0)[&rate=8.162450938946277E-4]:1.390388456293E-1,2[&rate=7.866581426102401E-4]:2.298752884918E0)[&rate=0.0011927129686618604]:7.213266134374E0,5[&rate=5.347396819598798E-4]:9.512019019292E0)[&rate=0.0010276524763555685]:2.448117964561E0,((6[&rate=8.011462784104569E-4]:8.777466910472E0,7[&rate=3.9668082566189655E-4]:8.777466910472E0)[&rate=4.957164843973707E-4]:9.635226549902E-1,1[&rate=4.0933811251285486E-4]:9.740989565462E0)[&rate=6.645369369746817E-4]:2.219147418391E0)[&rate=4.328881382597832E-4]:5.666564513107E1)[&rate=8.485844998717995E-4]:1.927302863431E0,(16[&rate=7.336529429660322E-4]:2.916990785648E1,((22[&rate=7.727168207778262E-4]:3.076209229934E0,21[&rate=3.130715612843095E-4]:3.076209229934E0)[&rate=6.228086983822656E-4]:3.018702687719E0,20[&rate=5.733737307587217E-4]:6.094911917652E0)[&rate=0.0013436459168149695]:2.307499593883E1)[&rate=9.040233397362897E-4]:4.138317712188E1)[&rate=4.4400706600514905E-4]:1.216655454383E0)[&rate=3.6868247645289694E-4]:2.275399260344E0)[&rate=5.153566350805581E-4]:3.367729682298E0,(17[&rate=5.928995391314353E-4]:6.822906962202E1,(27[&rate=5.153566350805581E-4]:2.354750925336E1,28[&rate=0.0010276524763555685]:2.354750925336E1)[&rate=5.347396819598798E-4]:4.468156036866E1)[&rate=4.653168856384377E-4]:9.18379975336E0)[&rate=0.0010977069942727227]:5.223079293225E1); +tree STATE_250000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55132.247700953696,EEF_ucld_branchRates=-266.168517335019,lnP=-55132.247700953696,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.054262875524697E-4]:7.498435340527E0,9[&rate=5.112179090560738E-4]:7.498435340527E0)[&rate=6.631938967808402E-4]:6.445725938152E0,15[&rate=4.068315730321986E-4]:1.394416127868E1)[&rate=7.870812859641207E-4]:1.050935679464E2,(14[&rate=0.0011304003137496937]:4.533636500178E1,24[&rate=6.90892597510654E-4]:4.533636500178E1)[&rate=9.739896053362237E-4]:7.370136422325E1)[&rate=0.0011304003137496937]:1.061469981934E1,((((12[&rate=7.693283679834196E-4]:7.181420785649E1,((16[&rate=5.325692392468351E-4]:3.27986304511E1,((22[&rate=0.0011304003137496937]:3.16077433008E0,21[&rate=2.8231671158847804E-4]:3.16077433008E0)[&rate=5.006854370385869E-4]:3.409667097356E0,20[&rate=8.461116948340604E-4]:6.570441427436E0)[&rate=0.0014471392806453807]:2.622818902367E1)[&rate=7.054262875524697E-4]:3.78365857323E1,(((30[&rate=7.361034647427703E-4]:4.829589070389E1,26[&rate=6.37056684258999E-4]:4.829589070389E1)[&rate=3.2592025622861905E-4]:8.351241593826E0,32[&rate=4.1743503988676714E-4]:5.664713229772E1)[&rate=3.626287869466448E-4]:1.126379556618E1,((((2[&rate=0.0010066354268866388]:1.708111556695E0,4[&rate=2.980366973779141E-4]:1.708111556695E0)[&rate=7.361034647427703E-4]:6.796624828377E-1,3[&rate=5.544195325295764E-4]:2.387774039533E0)[&rate=8.05717539967545E-4]:8.167379437726E0,5[&rate=3.9609202417158424E-4]:1.055515347726E1)[&rate=5.655770046418935E-4]:1.62436114994E0,((7[&rate=4.694497434513823E-4]:9.435730644281E0,6[&rate=3.508685067582974E-4]:9.435730644281E0)[&rate=3.740418280138357E-4]:3.251765038449E-1,1[&rate=5.434230972300329E-4]:9.760907148126E0)[&rate=0.0011304003137496937]:2.418607479073E0)[&rate=4.4874230321595616E-4]:5.57314132367E1)[&rate=6.122164449451049E-4]:2.724288319507E0)[&rate=0.0012510653977741025]:1.178991673086E0)[&rate=8.917035626264312E-4]:1.649659453698E0,25[&rate=6.37056684258999E-4]:7.346386731019E1)[&rate=1.7522959596512588E-4]:1.0142118929E0,((((11[&rate=2.980366973779141E-4]:2.083849871642E1,29[&rate=7.870812859641207E-4]:2.083849871642E1)[&rate=0.0010836904498318872]:4.60133516565E1,(33[&rate=7.361034647427703E-4]:5.552804241754E1,13[&rate=3.386716339186931E-4]:5.552804241754E1)[&rate=5.544195325295764E-4]:1.132380795538E1)[&rate=5.544195325295764E-4]:4.066793569521E0,(19[&rate=7.870812859641207E-4]:1.48947353154E1,18[&rate=4.1743503988676714E-4]:1.48947353154E1)[&rate=5.006854370385869E-4]:5.602390862704E1)[&rate=4.694497434513823E-4]:1.56932824263E0,((10[&rate=4.2793576826849564E-4]:2.874940660421E1,31[&rate=5.21840035525396E-4]:2.874940660421E1)[&rate=4.694497434513823E-4]:4.208481760454E1,23[&rate=4.3836288967464106E-4]:7.083422420874E1)[&rate=3.626287869466448E-4]:1.653747976327E0)[&rate=5.434230972300329E-4]:1.990107018016E0)[&rate=0.0011304003137496937]:3.301863812349E0,(17[&rate=8.461116948340604E-4]:6.771313561975E1,(27[&rate=4.694497434513823E-4]:2.675452358559E1,28[&rate=8.681643522631967E-4]:2.675452358559E1)[&rate=6.90892597510654E-4]:4.095861203416E1)[&rate=2.4406542881221543E-4]:1.006680739569E1)[&rate=0.001185077784679174]:5.187248602893E1); +tree STATE_260000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55128.95985748921,EEF_ucld_branchRates=-266.168517335019,lnP=-55128.95985748921,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.623996731855348E-4]:7.930435388755E0,9[&rate=7.823807634262227E-4]:7.930435388755E0)[&rate=6.075512393453337E-4]:6.87860971885E0,15[&rate=4.99180114971304E-4]:1.48090451076E1)[&rate=5.087546917273912E-4]:1.127105678604E2,(14[&rate=0.001170659974518494]:5.161257818281E1,24[&rate=0.0010718341986342241]:5.161257818281E1)[&rate=0.0010332151021302336]:7.590703478525E1)[&rate=7.823807634262227E-4]:1.318019706863E0,((((12[&rate=7.823807634262227E-4]:7.322723509479E1,((16[&rate=3.6345257283695626E-4]:3.069201448922E1,((22[&rate=4.306139997908641E-4]:3.308839476079E0,21[&rate=7.522829453749765E-4]:3.308839476079E0)[&rate=8.331632730438785E-4]:3.422519400357E0,20[&rate=0.0010332151021302336]:6.731358876436E0)[&rate=0.001116777723546346]:2.396065561279E1)[&rate=8.331632730438785E-4]:4.21905596248E1,(((30[&rate=6.623996731855348E-4]:4.928675709438E1,26[&rate=7.113017791132549E-4]:4.928675709438E1)[&rate=7.823807634262227E-4]:9.141438591361E0,32[&rate=4.703082074370173E-4]:5.842819568574E1)[&rate=3.2078032506209974E-4]:1.287642598667E1,((((2[&rate=7.244817027080791E-4]:1.703712382241E0,4[&rate=6.985410132915509E-4]:1.703712382241E0)[&rate=8.520146343313285E-4]:9.730164617917E-1,3[&rate=4.605649682873486E-4]:2.676728844033E0)[&rate=0.0010332151021302336]:9.768057598426E0,5[&rate=5.8696042329355E-4]:1.244478644246E1)[&rate=3.987986818721761E-4]:1.824571886374E0,((7[&rate=2.559488578322969E-4]:9.451200613723E0,6[&rate=5.570562943954099E-4]:9.451200613723E0)[&rate=4.5072160441169003E-4]:8.76827876103E-1,1[&rate=5.768781992753943E-4]:1.032802848983E1)[&rate=9.690258633909966E-4]:3.941329839007E0)[&rate=5.375843078901635E-4]:5.703526334358E1)[&rate=3.033019071807867E-4]:1.577952441607E0)[&rate=0.001116777723546346]:3.446609807678E-1)[&rate=5.8696042329355E-4]:2.012022761784E0,25[&rate=6.861599637669243E-4]:7.523925785657E1)[&rate=7.381252561783771E-4]:1.387272400682E0,((((11[&rate=5.472844627973523E-4]:2.04985324703E1,29[&rate=3.987986818721761E-4]:2.04985324703E1)[&rate=7.381252561783771E-4]:4.662281028524E1,(33[&rate=6.861599637669243E-4]:6.043624243283E1,13[&rate=4.0969104105761776E-4]:6.043624243283E1)[&rate=4.306139997908641E-4]:6.685100322707E0)[&rate=4.407491045713649E-4]:2.063112296493E0,(19[&rate=5.279400364095534E-4]:1.551529207325E1,18[&rate=5.375843078901635E-4]:1.551529207325E1)[&rate=3.2078032506209974E-4]:5.366916297878E1)[&rate=4.99180114971304E-4]:4.350101409979E0,((10[&rate=5.669155682962563E-4]:2.814048490328E1,31[&rate=7.670125618544826E-4]:2.814048490328E1)[&rate=5.768781992753943E-4]:4.473814803332E1,23[&rate=5.279400364095534E-4]:7.28786329366E1)[&rate=3.362573225142306E-4]:6.559235254115E-1)[&rate=4.99180114971304E-4]:3.091973795248E0)[&rate=4.0969104105761776E-4]:2.841346394954E0,(17[&rate=9.166045862116356E-4]:6.947835644303E1,(27[&rate=3.8752803340988824E-4]:2.71327907126E1,28[&rate=0.0010718341986342241]:2.71327907126E1)[&rate=9.690258633909966E-4]:4.234556573044E1)[&rate=4.99180114971304E-4]:9.989520209176E0)[&rate=0.0013286627780883958]:4.936975602271E1); +tree STATE_270000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55133.383846295386,EEF_ucld_branchRates=-266.168517335019,lnP=-55133.383846295386,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.920922211552181E-4]:8.175948751862E0,9[&rate=7.195452228813573E-4]:8.175948751862E0)[&rate=8.41634491297603E-4]:6.665062601845E0,15[&rate=6.222276720631426E-4]:1.484101135371E1)[&rate=5.971260822325347E-4]:1.054205605133E2,(14[&rate=0.0011731673772479557]:5.210641856086E1,24[&rate=7.677955335044366E-4]:5.210641856086E1)[&rate=8.219283680549296E-4]:6.815515330615E1)[&rate=7.350781669307569E-4]:8.043943744899E0,((((12[&rate=7.850953749215767E-4]:7.569056808921E1,((16[&rate=3.886656730243359E-4]:3.067805567357E1,((22[&rate=0.0012257250989493468]:3.225455520884E0,21[&rate=9.07280724868349E-4]:3.225455520884E0)[&rate=6.898891276848637E-4]:3.311155052434E0,20[&rate=5.376375472268411E-4]:6.536610573318E0)[&rate=0.001361876833514723]:2.414144510025E1)[&rate=7.850953749215767E-4]:4.396422609191E1,(((30[&rate=0.0010168266716569774]:5.112220656487E1,26[&rate=8.41634491297603E-4]:5.112220656487E1)[&rate=0.0010866578413420219]:5.162716716594E0,32[&rate=5.261386040665878E-4]:5.628492328147E1)[&rate=4.920922211552181E-4]:1.552134996101E1,((((2[&rate=2.901918976539974E-4]:2.117788129137E0,4[&rate=3.505683849691803E-4]:2.117788129137E0)[&rate=3.7635683255063645E-4]:7.084004388486E-1,3[&rate=4.355935399663658E-4]:2.826188567986E0)[&rate=3.7635683255063645E-4]:1.003452267058E1,5[&rate=4.241082033708682E-4]:1.286071123856E1)[&rate=0.001361876833514723]:1.780658958662E0,((7[&rate=3.0699060914042624E-4]:7.237958094195E0,6[&rate=6.898891276848637E-4]:7.237958094195E0)[&rate=5.033854934225433E-4]:1.615600891718E0,1[&rate=2.901918976539974E-4]:8.853558985913E0)[&rate=5.033854934225433E-4]:5.787811211313E0)[&rate=5.728538207507187E-4]:5.716490304525E1)[&rate=4.1248721961675014E-4]:2.836008523003E0)[&rate=0.0012873541109131332]:1.048286323727E0)[&rate=0.0011731673772479557]:5.947263693037E-1,25[&rate=5.609759313818002E-4]:7.628529445851E1)[&rate=9.07280724868349E-4]:1.070074699178E0,((((11[&rate=7.677955335044366E-4]:2.011807834325E1,29[&rate=9.318509275404434E-4]:2.011807834325E1)[&rate=5.971260822325347E-4]:4.909071411479E1,(33[&rate=8.031129241606054E-4]:5.922774269634E1,13[&rate=3.3687062081093447E-4]:5.922774269634E1)[&rate=4.5829466669501683E-4]:9.9810497617E0)[&rate=0.0012257250989493468]:3.159695568776E-1,(19[&rate=8.219283680549296E-4]:1.489894856832E1,18[&rate=4.4697867808133024E-4]:1.489894856832E1)[&rate=2.7140967905130294E-4]:5.46258134466E1)[&rate=0.0010866578413420219]:5.23462757835E0,((10[&rate=4.1248721961675014E-4]:2.317088903481E1,31[&rate=7.350781669307569E-4]:2.317088903481E1)[&rate=4.920922211552181E-4]:4.980267158392E1,23[&rate=5.376375472268411E-4]:7.297356061873E1)[&rate=5.848970635110142E-4]:1.785828974536E0)[&rate=5.261386040665878E-4]:2.595979564424E0)[&rate=3.886656730243359E-4]:3.275697548391E0,(17[&rate=8.41634491297603E-4]:7.145000952631E1,(27[&rate=5.609759313818002E-4]:2.811760020104E1,28[&rate=0.0011731673772479557]:2.811760020104E1)[&rate=5.492436196102969E-4]:4.333240932528E1)[&rate=2.494703367518972E-4]:9.181057179766E0)[&rate=0.0015841788159435314]:4.767444890583E1); +tree STATE_280000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55149.7507245411,EEF_ucld_branchRates=-266.168517335019,lnP=-55149.7507245411,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.838831575220492E-4]:9.040309774432E0,9[&rate=5.94720589150884E-4]:9.040309774432E0)[&rate=9.100842008263977E-4]:5.73741736938E0,15[&rate=8.881802196169915E-4]:1.477772714381E1)[&rate=9.100842008263977E-4]:1.053320219109E2,(14[&rate=9.6324808773468E-4]:5.047173035829E1,24[&rate=5.722912008784313E-4]:5.047173035829E1)[&rate=7.5399562035947E-4]:6.963801869642E1)[&rate=5.351175349519253E-4]:8.976403588065E0,((((12[&rate=7.905847375227864E-4]:7.341712117389E1,((16[&rate=5.872052885098997E-4]:2.931212348971E1,((22[&rate=5.351175349519253E-4]:3.168280075649E0,21[&rate=5.94720589150884E-4]:3.168280075649E0)[&rate=4.010432643010177E-4]:4.468600451192E0,20[&rate=5.722912008784313E-4]:7.636880526841E0)[&rate=9.969582181986244E-4]:2.167524296287E1)[&rate=5.500314242703794E-4]:4.231726496081E1,(((30[&rate=5.045725522097837E-4]:4.827030039199E1,26[&rate=6.176424753737096E-4]:4.827030039199E1)[&rate=9.347931782956376E-4]:1.171653524859E1,32[&rate=4.632488292974169E-4]:5.998683564059E1)[&rate=4.632488292974169E-4]:1.071322286568E1,((((3[&rate=7.428775315544855E-4]:2.429541551319E0,4[&rate=6.176424753737096E-4]:2.429541551319E0)[&rate=6.838831575220492E-4]:6.357281928055E-1,2[&rate=6.578690025376304E-4]:3.065269744125E0)[&rate=7.428775315544855E-4]:1.03353497822E1,5[&rate=4.542252632221988E-4]:1.340061952632E1)[&rate=4.7195668349570187E-4]:1.638804335881E0,((7[&rate=3.2860360326788753E-4]:8.913458515059E0,6[&rate=5.648686521781673E-4]:8.913458515059E0)[&rate=4.448179629208303E-4]:9.070344619762E-1,1[&rate=7.023310676281167E-4]:9.820492977035E0)[&rate=7.905847375227864E-4]:5.218930885171E0)[&rate=5.42590951954683E-4]:5.566063464406E1)[&rate=5.42590951954683E-4]:9.293299442575E-1)[&rate=7.119620333608019E-4]:1.787732723374E0)[&rate=7.777768856068012E-4]:2.481605583379E-1,25[&rate=5.045725522097837E-4]:7.366528173223E1)[&rate=7.219052492300305E-4]:1.21252047102E0,((((11[&rate=3.719542844083264E-4]:1.696086843838E1,29[&rate=7.023310676281167E-4]:1.696086843838E1)[&rate=6.578690025376304E-4]:5.239949549312E1,(33[&rate=7.219052492300305E-4]:6.063053543456E1,13[&rate=4.804027902846761E-4]:6.063053543456E1)[&rate=6.022905128021441E-4]:8.729828496933E0)[&rate=9.6324808773468E-4]:2.098865710478E0,(19[&rate=7.5399562035947E-4]:1.426245762704E1,18[&rate=8.684544906869791E-4]:1.426245762704E1)[&rate=3.874827955526875E-4]:5.719677201494E1)[&rate=4.244707875227891E-4]:1.164284991155E0,((10[&rate=5.351175349519253E-4]:2.2454288141E1,31[&rate=7.5399562035947E-4]:2.2454288141E1)[&rate=3.874827955526875E-4]:4.918610143369E1,23[&rate=5.797327671084461E-4]:7.164038957469E1)[&rate=4.966773435744941E-4]:9.831250584412E-1)[&rate=6.750132744376925E-4]:2.254287570123E0)[&rate=4.244707875227891E-4]:3.743811444367E0,(17[&rate=9.347931782956376E-4]:6.684282369814E1,(27[&rate=5.574529279242441E-4]:2.413559643287E1,28[&rate=9.969582181986244E-4]:2.413559643287E1)[&rate=8.339020694832941E-4]:4.270722726527E1)[&rate=4.804027902846761E-4]:1.177878994948E1)[&rate=0.0010934915817671375]:5.046453899516E1); +tree STATE_290000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55148.13088525634,EEF_ucld_branchRates=-266.168517335019,lnP=-55148.13088525634,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.80504285507175E-4]:9.328419597973E0,9[&rate=0.0011872889541274224]:9.328419597973E0)[&rate=8.618496752849605E-4]:4.321668890523E0,15[&rate=5.990791814502593E-4]:1.36500884885E1)[&rate=8.618496752849605E-4]:1.028175133768E2,(14[&rate=0.0012987822633672617]:4.331040452931E1,24[&rate=0.0012987822633672617]:4.331040452931E1)[&rate=7.40644812148554E-4]:7.315719733596E1)[&rate=9.399714438897914E-4]:1.286740234312E1,((((12[&rate=9.399714438897914E-4]:7.289366836027E1,((16[&rate=8.281205396261675E-4]:2.855098852516E1,((22[&rate=4.916883757336114E-4]:2.653894794424E0,21[&rate=4.0862772252842885E-4]:2.653894794424E0)[&rate=7.822334914725681E-4]:3.747181518079E0,20[&rate=0.0011437681047877296]:6.401076312503E0)[&rate=0.001237971799735081]:2.214991221265E1)[&rate=8.122629048320057E-4]:4.280401916975E1,(((30[&rate=8.79884048578548E-4]:4.878258062076E1,26[&rate=4.461754157602839E-4]:4.878258062076E1)[&rate=7.969862223327921E-4]:9.896646681239E0,32[&rate=5.990791814502593E-4]:5.8679227302E1)[&rate=2.7643474033596505E-4]:8.826123615671E0,((((3[&rate=0.0011055748552385252]:2.090579115184E0,4[&rate=9.624905278354314E-4]:2.090579115184E0)[&rate=0.001040686369893425]:2.13091452373E-1,2[&rate=7.969862223327921E-4]:2.303670567557E0)[&rate=5.34875088549741E-4]:1.09387386619E1,5[&rate=3.649263539585408E-4]:1.324240922945E1)[&rate=4.6937452589461767E-4]:1.592956727488E0,((7[&rate=4.461754157602839E-4]:8.109289230503E0,6[&rate=9.188106887960609E-4]:8.109289230503E0)[&rate=5.02618237058541E-4]:1.074273857939E0,1[&rate=5.990791814502593E-4]:9.183563088442E0)[&rate=3.9498263091071163E-4]:5.651802868499E0)[&rate=5.882751029549724E-4]:5.266998496073E1)[&rate=5.668461041377627E-4]:3.84965677724E0)[&rate=0.0011872889541274224]:1.538660665362E0)[&rate=5.34875088549741E-4]:6.302561207517E-1,25[&rate=8.618496752849605E-4]:7.352392448102E1)[&rate=6.662782538377766E-4]:1.051476320664E0,((((11[&rate=4.916883757336114E-4]:1.726709439355E1,29[&rate=6.209546939070735E-4]:1.726709439355E1)[&rate=7.275386426959252E-4]:5.240049770253E1,(33[&rate=6.780478464944935E-4]:6.200958900807E1,13[&rate=4.461754157602839E-4]:6.200958900807E1)[&rate=4.0862772252842885E-4]:7.658003088009E0)[&rate=3.478400867667744E-4]:2.120473495502E0,(19[&rate=0.0011437681047877296]:1.257137269664E1,18[&rate=5.561851125951048E-4]:1.257137269664E1)[&rate=4.6937452589461767E-4]:5.921669289494E1)[&rate=3.285618438778209E-4]:1.174479133022E0,((10[&rate=6.320614942815525E-4]:1.78052031027E1,31[&rate=7.822334914725681E-4]:1.78052031027E1)[&rate=5.45534754378577E-4]:5.291605149941E1,23[&rate=4.6937452589461767E-4]:7.072125460211E1)[&rate=8.79884048578548E-4]:2.241290122498E0)[&rate=5.775366819571403E-4]:1.612856077084E0)[&rate=6.209546939070735E-4]:5.479259836453E0,(17[&rate=8.281205396261675E-4]:6.973214824994E1,(27[&rate=6.320614942815525E-4]:2.846443620883E1,28[&rate=0.0012987822633672617]:2.846443620883E1)[&rate=5.775366819571403E-4]:4.126771204111E1)[&rate=7.275386426959252E-4]:1.03225123882E1)[&rate=0.001477378708947271]:4.928034357024E1); +tree STATE_300000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.97814248667,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.97814248667,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.4122754932126966E-4]:7.839376220219E0,9[&rate=9.703419385675729E-4]:7.839376220219E0)[&rate=5.365862057449854E-4]:5.587407976141E0,15[&rate=0.0011544142702848723]:1.342678419636E1)[&rate=7.473210265930614E-4]:1.046332493593E2,(14[&rate=0.0012731745219233615]:4.276631700088E1,24[&rate=0.0010680115957303895]:4.276631700088E1)[&rate=0.0011544142702848723]:7.529371655476E1)[&rate=9.998108265497994E-4]:1.176837142996E1,(((((((30[&rate=8.139156903755704E-4]:4.950511996866E1,26[&rate=4.941982285347786E-4]:4.950511996866E1)[&rate=8.727756834291306E-4]:1.061490419967E1,32[&rate=5.915742952064414E-4]:6.012002416833E1)[&rate=5.259091176305257E-4]:1.081896127417E1,((((3[&rate=7.473210265930614E-4]:1.875485619516E0,4[&rate=3.187113988022246E-4]:1.875485619516E0)[&rate=3.6056975172004123E-4]:4.561019868546E-1,2[&rate=5.803032088873166E-4]:2.331587606371E0)[&rate=5.365862057449854E-4]:1.001814818267E1,5[&rate=4.194277133476871E-4]:1.234973578904E1)[&rate=3.474541843234691E-4]:2.208025704489E0,((7[&rate=8.139156903755704E-4]:7.097462821299E0,1[&rate=3.6056975172004123E-4]:7.097462821299E0)[&rate=0.0011544142702848723]:1.084590401325E0,6[&rate=8.139156903755704E-4]:8.182053222625E0)[&rate=3.024665269965339E-4]:6.37570827091E0)[&rate=5.259091176305257E-4]:5.638122394896E1)[&rate=5.047334188134388E-4]:2.325944918494E0,((16[&rate=4.194277133476871E-4]:2.975117896255E1,((22[&rate=7.473210265930614E-4]:2.874266966972E0,21[&rate=4.4122754932126966E-4]:2.874266966972E0)[&rate=0.0012731745219233615]:3.569905286803E0,20[&rate=4.8367255252758926E-4]:6.444172253776E0)[&rate=0.0011083264881568448]:2.330700670877E1)[&rate=0.0011544142702848723]:4.229803860894E1,12[&rate=7.792271474715153E-4]:7.204921757149E1)[&rate=6.14659143672398E-4]:1.215712789499E0)[&rate=0.0012731745219233615]:9.374493392683E-1,25[&rate=5.803032088873166E-4]:7.420237970026E1)[&rate=3.024665269965339E-4]:1.249194109691E0,((((11[&rate=2.842247957982668E-4]:1.627094589773E1,29[&rate=5.691871305840823E-4]:1.627094589773E1)[&rate=6.898736315822631E-4]:5.466882001997E1,(33[&rate=6.765660276110974E-4]:5.951482370841E1,13[&rate=4.6256595284251427E-4]:5.951482370841E1)[&rate=4.0826403852077894E-4]:1.142494220929E1)[&rate=5.365862057449854E-4]:8.446594701405E-1,(19[&rate=8.947277555571281E-4]:1.336731376693E1,18[&rate=8.325140956445202E-4]:1.336731376693E1)[&rate=4.941982285347786E-4]:5.841711162091E1)[&rate=2.842247957982668E-4]:2.204519591457E0,((10[&rate=7.629625096193021E-4]:1.631074521436E1,31[&rate=4.194277133476871E-4]:1.631074521436E1)[&rate=3.730990140245297E-4]:5.676418840717E1,23[&rate=6.765660276110974E-4]:7.307493362154E1)[&rate=8.947277555571281E-4]:9.140113577603E-1)[&rate=7.473210265930614E-4]:1.462628830654E0)[&rate=6.386072509917536E-4]:3.166329739716E0,(17[&rate=8.325140956445202E-4]:6.816111265525E1,(27[&rate=5.152975256995224E-4]:2.951786226226E1,28[&rate=7.792271474715153E-4]:2.951786226226E1)[&rate=5.803032088873166E-4]:3.864325039299E1)[&rate=3.9686285895785216E-4]:1.045679089442E1)[&rate=0.0016358874134351166]:5.121050143594E1); +tree STATE_310000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.835238652406,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.835238652406,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.783859962822616E-4]:7.86409174467E0,9[&rate=8.09549886653282E-4]:7.86409174467E0)[&rate=7.926754359974824E-4]:5.820255088903E0,15[&rate=6.303098313419685E-4]:1.368434683357E1)[&rate=7.316824757003786E-4]:9.548336441473E1,(14[&rate=9.321671216434174E-4]:4.086993779842E1,24[&rate=0.0011308447054968673]:4.086993779842E1)[&rate=0.001087629702179525]:6.829777344988E1)[&rate=5.331518959431695E-4]:1.775282299697E1,(((25[&rate=7.765217560698567E-4]:7.703075306703E1,((((11[&rate=5.331518959431695E-4]:1.820653657137E1,29[&rate=3.5866793483694235E-4]:1.820653657137E1)[&rate=6.783859962822616E-4]:5.544028547673E1,(33[&rate=7.460862181405423E-4]:6.187283902927E1,13[&rate=3.4496151173705927E-4]:6.187283902927E1)[&rate=5.126029855880377E-4]:1.177398301882E1)[&rate=0.0011308447054968673]:1.815665813495E-1,(19[&rate=4.5074395442092074E-4]:2.097231310525E1,18[&rate=0.0011308447054968673]:2.097231310525E1)[&rate=3.958127684809231E-4]:5.285607552419E1)[&rate=5.228590069928957E-4]:1.460165842989E0,((10[&rate=5.966503520767643E-4]:1.771020788805E1,31[&rate=5.857740297675222E-4]:1.771020788805E1)[&rate=5.126029855880377E-4]:5.523810591347E1,23[&rate=5.64425331204165E-4]:7.294831380152E1)[&rate=9.855616852513195E-4]:2.340240670912E0)[&rate=4.7156978188916E-4]:1.742198594601E0)[&rate=4.4016182841007215E-4]:2.021650892914E-1,(((((3[&rate=7.460862181405423E-4]:1.871131876423E0,4[&rate=3.839455591238722E-4]:1.871131876423E0)[&rate=0.001241862800727849]:5.733313679341E-1,2[&rate=4.0730138896515045E-4]:2.444463244357E0)[&rate=8.09549886653282E-4]:9.382056724206E0,5[&rate=3.1412318568477504E-4]:1.182651996856E1)[&rate=8.45826423658717E-4]:2.778137006931E0,((7[&rate=5.966503520767643E-4]:6.558442896726E0,1[&rate=3.1412318568477504E-4]:6.558442896726E0)[&rate=3.1412318568477504E-4]:9.142854402811E-1,6[&rate=9.084248476469023E-4]:7.472728337007E0)[&rate=4.5074395442092074E-4]:7.131928638486E0)[&rate=5.331518959431695E-4]:5.983990048885E1,((((30[&rate=8.45826423658717E-4]:4.737190539612E1,26[&rate=5.434991714782479E-4]:4.737190539612E1)[&rate=7.460862181405423E-4]:1.543469287606E1,32[&rate=4.921281541380928E-4]:6.280659827218E1)[&rate=5.126029855880377E-4]:9.187598342879E0,(16[&rate=4.2942231287323497E-4]:2.831705262712E1,((22[&rate=3.7160550993674783E-4]:2.441419893492E0,21[&rate=5.539179842085052E-4]:2.441419893492E0)[&rate=9.321671216434174E-4]:3.114673697965E0,20[&rate=6.419404192946778E-4]:5.556093591457E0)[&rate=0.0014205487296152358]:2.276095903566E1)[&rate=7.316824757003786E-4]:4.367714398795E1)[&rate=8.45826423658717E-4]:6.403202960055E-1,12[&rate=8.272326050776073E-4]:7.263451691107E1)[&rate=3.3023939999086695E-4]:1.810040553277E0)[&rate=0.001087629702179525]:2.788360691981E0)[&rate=3.1412318568477504E-4]:2.21444987306E0,(17[&rate=6.783859962822616E-4]:7.078614106091E1,(27[&rate=4.0730138896515045E-4]:3.170229989166E1,28[&rate=0.001241862800727849]:3.170229989166E1)[&rate=0.001049763495741623]:3.908384116925E1)[&rate=5.857740297675222E-4]:8.661226968475E0)[&rate=0.0014205487296152358]:4.747316621588E1); +tree STATE_320000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55120.08869181443,EEF_ucld_branchRates=-266.168517335019,lnP=-55120.08869181443,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.0718979539547434E-4]:8.62141655943E0,9[&rate=8.893105022078821E-4]:8.62141655943E0)[&rate=2.9171387112025815E-4]:8.468703867485E0,15[&rate=2.9171387112025815E-4]:1.709012042692E1)[&rate=0.0011980547434518984]:8.904445602713E1,(14[&rate=0.0015043765998773123]:4.365766982755E1,24[&rate=8.661876788772245E-4]:4.365766982755E1)[&rate=9.97892066946853E-4]:6.24769066265E1)[&rate=3.740357265160861E-4]:1.133512924841E1,(((25[&rate=5.028863196117131E-4]:7.207133506376E1,(((16[&rate=3.0718979539547434E-4]:2.87321035452E1,((22[&rate=5.384828560390958E-4]:2.445183082451E0,21[&rate=8.234697503976938E-4]:2.445183082451E0)[&rate=9.97892066946853E-4]:3.000577003737E0,20[&rate=6.999949880548192E-4]:5.445760086187E0)[&rate=0.0016441064264122568]:2.328634345901E1)[&rate=0.0011980547434518984]:3.954275757615E1,(((((3[&rate=4.21772588919128E-4]:2.241633155084E0,4[&rate=6.009749880740397E-4]:2.241633155084E0)[&rate=6.275836487738687E-4]:3.502739002629E-1,2[&rate=0.0010659909348576804]:2.591907055347E0)[&rate=0.001254678489816079]:7.413941033851E0,5[&rate=4.796112313164184E-4]:1.00058480892E1)[&rate=0.0011980547434518984]:2.125298595579E0,((7[&rate=2.7491856637965425E-4]:6.171248922878E0,1[&rate=5.146406977180895E-4]:6.171248922878E0)[&rate=5.753789405276036E-4]:8.919761884613E-1,6[&rate=0.001254678489816079]:7.06322511134E0)[&rate=5.26499621581543E-4]:5.067921573436E0)[&rate=5.146406977180895E-4]:5.438120081464E1,((30[&rate=9.67840313216272E-4]:5.160826138662E1,26[&rate=7.664245646437482E-4]:5.160826138662E1)[&rate=8.893105022078821E-4]:6.578350506767E0,32[&rate=3.487524343507586E-4]:5.818661189339E1)[&rate=5.753789405276036E-4]:8.325735606023E0)[&rate=3.740357265160861E-4]:1.762513621935E0)[&rate=0.0011980547434518984]:1.015153134413E0,12[&rate=8.036184380332502E-4]:6.929001425576E1)[&rate=6.009749880740397E-4]:2.781320807998E0)[&rate=3.35507526098214E-4]:1.046615209578E0,((((11[&rate=4.796112313164184E-4]:2.191322208005E1,29[&rate=6.847095811714894E-4]:2.191322208005E1)[&rate=8.442869659914175E-4]:4.642167828703E1,(33[&rate=8.036184380332502E-4]:5.900853216635E1,13[&rate=2.5620208969292477E-4]:5.900853216635E1)[&rate=7.489194505655521E-4]:9.326368200728E0)[&rate=0.0013212413489066277]:8.422953866679E-1,(19[&rate=5.26499621581543E-4]:1.915488834336E1,18[&rate=4.21772588919128E-4]:1.915488834336E1)[&rate=3.35507526098214E-4]:5.002230741038E1)[&rate=4.333969154944361E-4]:2.763516574703E0,((10[&rate=6.999949880548192E-4]:1.942783223011E1,31[&rate=7.489194505655521E-4]:1.942783223011E1)[&rate=3.9823142651795873E-4]:5.081087669559E1,23[&rate=4.912165913798251E-4]:7.02387089257E1)[&rate=8.442869659914175E-4]:1.702003402746E0)[&rate=3.740357265160861E-4]:1.17723794489E0)[&rate=7.664245646437482E-4]:3.317800636242E0,(17[&rate=7.489194505655521E-4]:6.678684118894E1,(27[&rate=4.1006249158597976E-4]:3.069909978544E1,28[&rate=4.796112313164184E-4]:3.069909978544E1)[&rate=5.629020524501354E-4]:3.608774140349E1)[&rate=6.413318960392741E-4]:9.648909720642E0)[&rate=0.0016441064264122568]:4.103395479288E1); +tree STATE_330000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55164.152298851615,EEF_ucld_branchRates=-266.168517335019,lnP=-55164.152298851615,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.199149826163236E-4]:9.384460177684E0,9[&rate=0.0012469087659199754]:9.384460177684E0)[&rate=3.305536130628265E-4]:7.350740554985E0,15[&rate=9.858207584546319E-4]:1.673520073267E1)[&rate=7.075857763002685E-4]:9.386854805965E1,(14[&rate=0.0011673476851416934]:5.105961392189E1,24[&rate=5.907157969391524E-4]:5.105961392189E1)[&rate=9.555599745759055E-4]:5.954413487043E1)[&rate=5.264782879959428E-4]:9.17345289944E0,(((25[&rate=6.615305959940946E-4]:7.323101982938E1,((((33[&rate=5.085833759679743E-4]:5.990765079787E1,13[&rate=3.4542942912011245E-4]:5.990765079787E1)[&rate=5.085833759679743E-4]:8.502648884363E0,(11[&rate=5.354576232040577E-4]:1.626819082667E1,29[&rate=4.996362761927792E-4]:1.626819082667E1)[&rate=7.60278334505037E-4]:5.214210885556E1)[&rate=4.3521852579320815E-4]:1.64662442532E0,(19[&rate=7.901730739308938E-4]:2.171368041397E1,18[&rate=4.154312207703542E-4]:2.171368041397E1)[&rate=4.5417514853360053E-4]:4.834324369358E1)[&rate=4.254506906912544E-4]:1.890197699984E0,((10[&rate=8.41401620768132E-4]:1.944602333553E1,31[&rate=6.955530386346045E-4]:1.944602333553E1)[&rate=3.4542942912011245E-4]:5.22190672385E1,23[&rate=4.5417514853360053E-4]:7.166509057402E1)[&rate=6.955530386346045E-4]:2.820312335142E-1)[&rate=6.955530386346045E-4]:1.283898021843E0)[&rate=3.4542942912011245E-4]:2.607579516628E0,((((30[&rate=7.60278334505037E-4]:4.946883982087E1,26[&rate=7.329203071104281E-4]:4.946883982087E1)[&rate=0.0010202018918278215]:1.035925834092E1,32[&rate=4.6343463865328903E-4]:5.982809816178E1)[&rate=5.719348986832371E-4]:1.087626525383E1,(12[&rate=7.075857763002685E-4]:6.911216622174E1,(16[&rate=4.051039324078304E-4]:3.304512324986E1,((22[&rate=7.329203071104281E-4]:3.45958541395E0,21[&rate=7.74869972046392E-4]:3.45958541395E0)[&rate=0.0010202018918278215]:3.820668740311E0,20[&rate=4.906669989183058E-4]:7.280254154261E0)[&rate=0.0010601111026454838]:2.57648690956E1)[&rate=7.329203071104281E-4]:3.606704297188E1)[&rate=5.719348986832371E-4]:1.59219719387E0)[&rate=3.8322405995839837E-4]:7.59425696601E-1,((((3[&rate=8.607191879175151E-4]:1.953203770814E0,4[&rate=7.74869972046392E-4]:1.953203770814E0)[&rate=6.10022467986193E-4]:2.162746567236E-1,2[&rate=3.305536130628265E-4]:2.169478427538E0)[&rate=6.615305959940946E-4]:7.12997506233E0,5[&rate=4.996362761927792E-4]:9.299453489868E0)[&rate=4.5417514853360053E-4]:1.368877075476E0,((7[&rate=6.507767260590256E-4]:7.674137649139E0,6[&rate=5.812676321762341E-4]:7.674137649139E0)[&rate=4.154312207703542E-4]:4.521865096779E-1,1[&rate=5.264782879959428E-4]:8.126324158817E0)[&rate=9.555599745759055E-4]:2.542006406527E0)[&rate=5.812676321762341E-4]:6.079545854687E1)[&rate=3.136970909796024E-4]:4.374810233794E0)[&rate=3.8322405995839837E-4]:2.463037214622E0,(17[&rate=8.41401620768132E-4]:6.870268097877E1,(27[&rate=5.354576232040577E-4]:3.359872275239E1,28[&rate=9.039496872177095E-4]:3.359872275239E1)[&rate=9.858207584546319E-4]:3.510395822637E1)[&rate=5.354576232040577E-4]:9.598955581862E0)[&rate=0.0012469087659199754]:4.147556513113E1); +tree STATE_340000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55140.0048038921,EEF_ucld_branchRates=-266.168517335019,lnP=-55140.0048038921,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.8500072564249324E-4]:7.299734412181E0,9[&rate=7.742002573880922E-4]:7.299734412181E0)[&rate=2.711464834820805E-4]:8.393395505026E0,15[&rate=2.560811022262293E-4]:1.569312991721E1)[&rate=7.20215974328871E-4]:1.059140339068E2,(14[&rate=0.001231551174350848]:5.546027315874E1,24[&rate=7.373593849638331E-4]:5.546027315874E1)[&rate=0.0010583999783827993]:6.614689066531E1)[&rate=3.445687187668126E-4]:2.870032068051E0,(((25[&rate=5.329862121865757E-4]:7.558771873246E1,(((16[&rate=3.5539948206660734E-4]:3.347720526631E1,((22[&rate=2.3925325272328371E-4]:3.182657574665E0,21[&rate=3.660318345992468E-4]:3.182657574665E0)[&rate=6.171935201323076E-4]:4.181560119265E0,20[&rate=8.873872869535182E-4]:7.36421769393E0)[&rate=0.0011065830848844326]:2.611298757238E1)[&rate=0.0011631239989753183]:3.667162645896E1,(((30[&rate=6.441534273268045E-4]:5.138882957727E1,26[&rate=5.002246558336993E-4]:5.138882957727E1)[&rate=0.0013181721819286276]:9.47176712882E0,32[&rate=4.1754034420116767E-4]:6.086059670608E1)[&rate=7.20215974328871E-4]:7.174207405295E0,((((2[&rate=5.794559677935096E-4]:2.153922745105E0,4[&rate=7.941144184387014E-4]:2.153922745105E0)[&rate=7.20215974328871E-4]:6.228262504043E-1,3[&rate=2.3925325272328371E-4]:2.77674899551E0)[&rate=6.171935201323076E-4]:7.374302967651E0,5[&rate=3.8686929868338605E-4]:1.015105196316E1)[&rate=0.0010164040179676142]:1.38384646379E0,((7[&rate=2.560811022262293E-4]:7.129642670811E0,6[&rate=3.10287028190222E-4]:7.129642670811E0)[&rate=4.3789223429771106E-4]:1.180041292795E0,1[&rate=4.481024648089928E-4]:8.309683963606E0)[&rate=3.8686929868338605E-4]:3.225214463344E0)[&rate=5.442639297972637E-4]:5.649990568443E1)[&rate=6.441534273268045E-4]:2.114027613888E0)[&rate=9.79166115383253E-4]:1.631997560514E0,12[&rate=7.742002573880922E-4]:7.178082928578E1)[&rate=4.79091542753898E-4]:3.806889446677E0)[&rate=6.728983327951417E-4]:1.744389050404E0,((((33[&rate=7.742002573880922E-4]:6.172327729797E1,13[&rate=3.8686929868338605E-4]:6.172327729797E1)[&rate=3.660318345992468E-4]:1.016327167061E1,(11[&rate=5.218998907311381E-4]:1.594550485844E1,29[&rate=8.616108009322891E-4]:1.594550485844E1)[&rate=6.880543346634598E-4]:5.594104411013E1)[&rate=3.8686929868338605E-4]:7.868921562888E-1,(19[&rate=4.79091542753898E-4]:1.898367700893E1,18[&rate=0.0011631239989753183]:1.898367700893E1)[&rate=5.442639297972637E-4]:5.368976411593E1)[&rate=3.10287028190222E-4]:2.249407945422E0,((10[&rate=5.329862121865757E-4]:2.706891955208E1,31[&rate=6.728983327951417E-4]:2.706891955208E1)[&rate=3.3348657930010346E-4]:4.654300132282E1,23[&rate=4.6868444578504573E-4]:7.361192087489E1)[&rate=9.79166115383253E-4]:1.31092819539E0)[&rate=4.3789223429771106E-4]:2.409258712578E0)[&rate=4.89599168143165E-4]:4.667033084742E0,(17[&rate=8.616108009322891E-4]:7.521695068874E1,(27[&rate=4.481024648089928E-4]:2.94072440983E1,28[&rate=0.0011065830848844326]:2.94072440983E1)[&rate=4.79091542753898E-4]:4.580970659044E1)[&rate=6.880543346634598E-4]:6.782190178868E0)[&rate=0.0014360106941210104]:4.247805502449E1); +tree STATE_350000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.98311687989,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.98311687989,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.2931123543252713E-4]:7.565641480275E0,9[&rate=6.668130719934744E-4]:7.565641480275E0)[&rate=7.004471630802707E-4]:1.018742936731E1,15[&rate=4.126762273166434E-4]:1.775307084758E1)[&rate=8.038723838870969E-4]:1.105168168751E2,(14[&rate=9.60365278436905E-4]:5.708047744717E1,24[&rate=6.218243683289752E-4]:5.708047744717E1)[&rate=0.0010045017510117759]:7.11894102755E1)[&rate=2.2931123543252713E-4]:1.115983299061E0,(((25[&rate=6.668130719934744E-4]:7.691588628736E1,(((16[&rate=3.3836276493082716E-4]:3.817611907732E1,((22[&rate=6.511671830441057E-4]:2.670096528631E0,21[&rate=4.4107201505269155E-4]:2.670096528631E0)[&rate=6.080011144387253E-4]:4.25394050273E0,20[&rate=4.31518675661454E-4]:6.924037031361E0)[&rate=0.001306707054222528]:3.125208204596E1)[&rate=0.0010563168828811695]:3.403271135635E1,12[&rate=0.0010563168828811695]:7.220883043367E1)[&rate=2.2931123543252713E-4]:1.523304884669E0,(((30[&rate=5.946721401622028E-4]:4.763692109534E1,26[&rate=4.704510243293309E-4]:4.763692109534E1)[&rate=8.038723838870969E-4]:1.27586956146E1,32[&rate=3.477608468741531E-4]:6.039561670994E1)[&rate=4.5073445438934234E-4]:9.907144596755E0,((((3[&rate=6.218243683289752E-4]:2.038105768053E0,4[&rate=3.9408026242344457E-4]:2.038105768053E0)[&rate=4.704510243293309E-4]:4.432190323603E-1,2[&rate=3.5708312536747927E-4]:2.481324800413E0)[&rate=8.572014798729186E-4]:6.889285282051E0,5[&rate=4.908021482855587E-4]:9.370610082464E0)[&rate=5.693199884690775E-4]:2.219642316096E0,((7[&rate=4.8053850783313614E-4]:7.247125645586E0,6[&rate=4.31518675661454E-4]:7.247125645586E0)[&rate=8.878269294127084E-4]:6.828624156791E-1,1[&rate=4.126762273166434E-4]:7.929988061265E0)[&rate=3.477608468741531E-4]:3.660264337295E0)[&rate=4.908021482855587E-4]:5.871250890813E1)[&rate=2.993603492303813E-4]:3.429374011645E0)[&rate=3.288602348456124E-4]:3.183750969025E0)[&rate=3.1921999003712166E-4]:1.749876018542E0,((((11[&rate=7.004471630802707E-4]:1.77971377438E1,29[&rate=4.033555050521975E-4]:1.77971377438E1)[&rate=9.219115606708201E-4]:5.234938081195E1,(33[&rate=7.186341670765685E-4]:6.262413835368E1,13[&rate=2.783478864163879E-4]:6.262413835368E1)[&rate=2.2931123543252713E-4]:7.52238020207E0)[&rate=4.31518675661454E-4]:2.065047370915E0,(19[&rate=5.817919197274414E-4]:1.741959706793E1,18[&rate=6.511671830441057E-4]:1.741959706793E1)[&rate=3.755981237538701E-4]:5.479196885873E1)[&rate=2.6720263647309224E-4]:4.092754259411E0,((10[&rate=3.9408026242344457E-4]:2.590590288957E1,31[&rate=0.0010045017510117759]:2.590590288957E1)[&rate=2.890339613209342E-4]:4.87027852883E1,23[&rate=6.511671830441057E-4]:7.460868817787E1)[&rate=5.228423210288277E-4]:1.695632008202E0)[&rate=3.477608468741531E-4]:2.361442119832E0)[&rate=3.094026100694693E-4]:3.340952863547E0,(17[&rate=7.803075811097269E-4]:7.10361419093E1,(27[&rate=5.572201506491944E-4]:2.898298849902E1,28[&rate=0.0010563168828811695]:2.898298849902E1)[&rate=5.817919197274414E-4]:4.205315341028E1)[&rate=2.2931123543252713E-4]:1.097057326015E1)[&rate=0.0011985231478246726]:4.737915585229E1); +tree STATE_360000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55144.23194976868,EEF_ucld_branchRates=-266.168517335019,lnP=-55144.23194976868,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.9036126586915627E-4]:7.992500105232E0,9[&rate=0.001330167410190824]:7.992500105232E0)[&rate=2.7208481364771254E-4]:1.298222852658E1,15[&rate=4.128225176447285E-4]:2.097472863181E1)[&rate=5.828511996928257E-4]:1.005024825484E2,(14[&rate=9.855101789570866E-4]:4.660692070641E1,24[&rate=0.0011413427501226758]:4.660692070641E1)[&rate=0.0010955921307004414]:7.487029047385E1)[&rate=7.735387203317878E-4]:7.628021143953E0,(((25[&rate=7.735387203317878E-4]:7.438492844814E1,(((16[&rate=2.7208481364771254E-4]:3.603875218492E1,((22[&rate=5.586566083823783E-4]:3.007795040174E0,21[&rate=6.762079486406869E-4]:3.007795040174E0)[&rate=5.123749152906806E-4]:4.806722516883E0,20[&rate=4.899772013367455E-4]:7.814517557058E0)[&rate=0.0014247361269235236]:2.822423462786E1)[&rate=0.001330167410190824]:3.387072113771E1,(((30[&rate=0.0010955921307004414]:5.028909597414E1,26[&rate=6.209446804137477E-4]:5.028909597414E1)[&rate=8.537793442501692E-4]:9.087093391985E0,32[&rate=4.788982320443306E-4]:5.937618936612E1)[&rate=5.237312395042528E-4]:9.30772294512E0,((((3[&rate=7.921460719124066E-4]:2.010013679926E0,4[&rate=3.9036126586915627E-4]:2.010013679926E0)[&rate=2.540248296388278E-4]:1.556293861977E-1,2[&rate=5.586566083823783E-4]:2.165643066124E0)[&rate=8.766923713049368E-4]:7.844883268456E0,5[&rate=5.828511996928257E-4]:1.001052633458E1)[&rate=8.537793442501692E-4]:2.113791419451E0,((7[&rate=0.0012555107719922777]:6.734390541515E0,6[&rate=5.352175357440848E-4]:6.734390541515E0)[&rate=4.6787360788713505E-4]:8.351924407384E-1,1[&rate=3.303404084242987E-4]:7.569582982254E0)[&rate=2.8826383651629674E-4]:4.554734771777E0)[&rate=5.352175357440848E-4]:5.655959455721E1)[&rate=4.568833511328086E-4]:1.225561011384E0)[&rate=7.735387203317878E-4]:1.97154435633E0,12[&rate=9.271369461214454E-4]:7.188101767896E1)[&rate=7.386432489810813E-4]:2.50391076918E0)[&rate=3.303404084242987E-4]:7.00986193966E-1,((((11[&rate=4.788982320443306E-4]:2.129183066913E1,29[&rate=3.4303708910610317E-4]:2.129183066913E1)[&rate=7.063545484398032E-4]:4.650803734128E1,(33[&rate=8.321480931952724E-4]:6.211443918041E1,13[&rate=4.128225176447285E-4]:6.211443918041E1)[&rate=3.553069096937381E-4]:5.68542883001E0)[&rate=0.0011413427501226758]:2.201117019389E0,(19[&rate=9.551679157997913E-4]:2.013529770296E1,18[&rate=4.128225176447285E-4]:2.013529770296E1)[&rate=2.7208481364771254E-4]:4.986568732685E1)[&rate=3.9036126586915627E-4]:2.454334857323E0,((10[&rate=3.9036126586915627E-4]:2.449469631288E1,31[&rate=7.063545484398032E-4]:2.449469631288E1)[&rate=4.6787360788713505E-4]:4.642273828654E1,23[&rate=7.222048037579182E-4]:7.091743459941E1)[&rate=6.910383124455425E-4]:1.537885287714E0)[&rate=5.706490470005464E-4]:2.630594754974E0)[&rate=4.239015084628049E-4]:2.34233701637E0,(17[&rate=7.735387203317878E-4]:6.437116169034E1,(27[&rate=5.011298042311908E-4]:2.801771310577E1,28[&rate=0.0012555107719922777]:2.801771310577E1)[&rate=6.910383124455425E-4]:3.635344858457E1)[&rate=6.618203905546064E-4]:1.305708996813E1)[&rate=0.0014247361269235236]:5.167698066574E1); +tree STATE_370000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55120.54834236956,EEF_ucld_branchRates=-266.168517335019,lnP=-55120.54834236956,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.2571128467102086E-4]:8.65575358525E0,9[&rate=6.092093528403125E-4]:8.65575358525E0)[&rate=3.6589440696887843E-4]:9.912251014151E0,15[&rate=5.284319883732004E-4]:1.85680045994E1)[&rate=8.91127038171747E-4]:9.336079262494E1,(14[&rate=0.0011637269197829997]:4.932478400773E1,24[&rate=8.91127038171747E-4]:4.932478400773E1)[&rate=9.910727556127772E-4]:6.260401321662E1)[&rate=6.891453312923163E-4]:1.740450119242E1,(((25[&rate=8.187372205277585E-4]:7.598962721367E1,((12[&rate=8.525858200782565E-4]:7.195480095474E1,(16[&rate=4.74567816609892E-4]:3.80078952537E1,((22[&rate=6.092093528403125E-4]:3.657567811239E0,21[&rate=0.0010619083749923465]:3.657567811239E0)[&rate=4.557269496781525E-4]:3.637394613072E0,20[&rate=4.557269496781525E-4]:7.294962424311E0)[&rate=0.0013529785126726087]:3.071293282939E1)[&rate=8.187372205277585E-4]:3.394690570105E1)[&rate=7.742850623162123E-4]:1.118544577968E0,(((30[&rate=7.352816325886436E-4]:4.620322721779E1,26[&rate=7.1151422637361E-4]:4.620322721779E1)[&rate=6.784038658200779E-4]:1.002652306921E1,32[&rate=4.557269496781525E-4]:5.622975028701E1)[&rate=4.038338852137106E-4]:1.307409549414E1,((((3[&rate=6.891453312923163E-4]:2.115486988277E0,4[&rate=7.607695189356256E-4]:2.115486988277E0)[&rate=3.338810235614056E-4]:3.579320057099E-1,2[&rate=5.195949314692891E-4]:2.473418993987E0)[&rate=6.377878693286522E-4]:7.904539445729E0,5[&rate=3.6589440696887843E-4]:1.037795843972E1)[&rate=5.372562424385791E-4]:1.673649338594E0,((7[&rate=5.907906515107808E-4]:6.866139816564E0,6[&rate=6.092093528403125E-4]:6.866139816564E0)[&rate=5.817251330571535E-4]:1.342817290293E0,1[&rate=5.638089927918258E-4]:8.208957106856E0)[&rate=5.372562424385791E-4]:3.842650671454E0)[&rate=6.891453312923163E-4]:5.725223800284E1)[&rate=4.557269496781525E-4]:3.769499751567E0)[&rate=5.727360274597224E-4]:2.916281680962E0)[&rate=7.352816325886436E-4]:6.314183556019E-1,((((11[&rate=4.837564289052699E-4]:2.001579459214E1,29[&rate=4.360167725583312E-4]:2.001579459214E1)[&rate=7.477870002010887E-4]:5.05079608847E1,(33[&rate=7.477870002010887E-4]:6.285606868194E1,13[&rate=3.338810235614056E-4]:6.285606868194E1)[&rate=5.638089927918258E-4]:7.66768679489E0)[&rate=0.0011072663149875885]:1.349105458778E0,(19[&rate=7.001721623700593E-4]:1.581213752454E1,18[&rate=9.910727556127772E-4]:1.581213752454E1)[&rate=3.338810235614056E-4]:5.606072341107E1)[&rate=6.679208324405266E-4]:1.818655528467E0,((10[&rate=4.150145341679261E-4]:2.34996347353E1,31[&rate=5.372562424385791E-4]:2.34996347353E1)[&rate=4.74567816609892E-4]:4.850383732859E1,23[&rate=7.352816325886436E-4]:7.200347206388E1)[&rate=5.817251330571535E-4]:1.688044400194E0)[&rate=9.362234407094129E-4]:2.929529105198E0)[&rate=5.460837193704791E-4]:3.178911670002E0,(17[&rate=9.910727556127772E-4]:7.190455498876E1,(27[&rate=4.74567816609892E-4]:2.800419099067E1,28[&rate=0.0011072663149875885]:2.800419099067E1)[&rate=5.018130324777344E-4]:4.390036399808E1)[&rate=8.031858842731698E-4]:7.895402250522E0)[&rate=0.0010619083749923465]:4.953334117749E1); +tree STATE_380000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55149.64650959004,EEF_ucld_branchRates=-266.168517335019,lnP=-55149.64650959004,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.326845677091347E-4]:7.221027308879E0,9[&rate=6.792167394659755E-4]:7.221027308879E0)[&rate=7.921831335468257E-4]:7.29186265042E0,15[&rate=4.8131935674770453E-4]:1.45128899593E1)[&rate=7.673338887139629E-4]:9.371418572623E1,(14[&rate=0.0010803732754328889]:5.023477700599E1,24[&rate=7.795720109023393E-4]:5.023477700599E1)[&rate=0.0011563681854345788]:5.799229867954E1)[&rate=8.624539462662446E-4]:1.544204261733E1,(((25[&rate=5.911840988952641E-4]:7.295008950485E1,(((((30[&rate=8.951245881029778E-4]:4.917738625511E1,26[&rate=6.296082297552757E-4]:4.917738625511E1)[&rate=8.052074818943434E-4]:1.11386368769E1,32[&rate=7.554329928173054E-4]:6.031602313201E1)[&rate=6.296082297552757E-4]:8.547191741441E0,((((3[&rate=4.4631648619581087E-4]:2.157258464715E0,4[&rate=5.720427955539006E-4]:2.157258464715E0)[&rate=0.001265467892128412]:4.408091755692E-1,2[&rate=0.0011155874857326554]:2.598067640284E0)[&rate=8.186906217609709E-4]:6.222317456591E0,5[&rate=4.5848150213762456E-4]:8.820385096876E0)[&rate=0.0011563681854345788]:2.772977866102E0,((7[&rate=0.0012049886468957292]:7.241297907922E0,6[&rate=8.186906217609709E-4]:7.241297907922E0)[&rate=3.700813547929858E-4]:1.174159445827E0,1[&rate=5.331700608572854E-4]:8.415457353749E0)[&rate=4.0499736836836574E-4]:3.177905609229E0)[&rate=5.911840988952641E-4]:5.726985191048E1)[&rate=5.231965227973708E-4]:1.455729683609E0,(16[&rate=5.027368813236687E-4]:3.425520035796E1,((22[&rate=6.199438949831083E-4]:3.690675265733E0,21[&rate=7.325178368501533E-4]:3.690675265733E0)[&rate=0.0011155874857326554]:2.716112745635E0,20[&rate=4.5848150213762456E-4]:6.406788011367E0)[&rate=0.0017314715923713697]:2.784841234659E1)[&rate=9.315530436773193E-4]:3.606374419911E1)[&rate=5.027368813236687E-4]:1.235601115951E0,12[&rate=8.052074818943434E-4]:7.155454567301E1)[&rate=6.690703636266528E-4]:1.395543831831E0)[&rate=5.527607262591192E-4]:1.509896621045E0,((((11[&rate=6.103289309309828E-4]:1.555283369581E1,29[&rate=8.783802886697805E-4]:1.555283369581E1)[&rate=6.199438949831083E-4]:5.159336716433E1,(33[&rate=9.128022213785478E-4]:6.192695330134E1,13[&rate=3.8865600366642483E-4]:6.192695330134E1)[&rate=6.199438949831083E-4]:5.219247558796E0)[&rate=6.895090252547684E-4]:2.863248447164E0,(19[&rate=5.027368813236687E-4]:1.618447806286E1,18[&rate=7.4383727821973E-4]:1.618447806286E1)[&rate=3.700813547929858E-4]:5.382497124443E1)[&rate=3.8865600366642483E-4]:2.649988537768E0,((10[&rate=5.911840988952641E-4]:2.785783319789E1,31[&rate=5.231965227973708E-4]:2.785783319789E1)[&rate=5.027368813236687E-4]:4.251793003057E1,23[&rate=7.554329928173054E-4]:7.037576322847E1)[&rate=6.690703636266528E-4]:2.283674616599E0)[&rate=5.720427955539006E-4]:1.800548280827E0)[&rate=9.730048571709354E-4]:2.571669531208E0,(17[&rate=0.0010214721199925906]:6.595326549953E1,(27[&rate=7.795720109023393E-4]:2.857267442014E1,28[&rate=0.0012049886468957292]:2.857267442014E1)[&rate=5.527607262591192E-4]:3.73805910794E1)[&rate=6.491470045208704E-4]:1.107839015757E1)[&rate=9.515489893227806E-4]:4.663746264576E1); +tree STATE_390000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55126.25413185855,EEF_ucld_branchRates=-266.168517335019,lnP=-55126.25413185855,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.258391030934407E-4]:8.786358449621E0,9[&rate=8.918580792882567E-4]:8.786358449621E0)[&rate=7.334771449872476E-4]:6.91963446672E0,15[&rate=5.01832757128293E-4]:1.570599291634E1)[&rate=7.334771449872476E-4]:1.00623040432E2,(14[&rate=0.001138742457675]:5.332158051898E1,24[&rate=9.309998875255093E-4]:5.332158051898E1)[&rate=0.001138742457675]:6.30074528294E1)[&rate=7.454188902840357E-4]:8.341046860981E0,(((25[&rate=5.979887219784931E-4]:7.206942104874E1,((((11[&rate=3.2924440927268884E-4]:1.739931641171E1,29[&rate=5.311582174218169E-4]:1.739931641171E1)[&rate=7.703731528427789E-4]:4.951666580421E1,(33[&rate=8.74018394178337E-4]:5.841954082873E1,13[&rate=3.691249468343066E-4]:5.841954082873E1)[&rate=0.001138742457675]:8.496441387189E0)[&rate=5.979887219784931E-4]:1.185113891106E0,(19[&rate=7.970213146747608E-4]:1.541223890467E1,18[&rate=8.111011434979639E-4]:1.541223890467E1)[&rate=6.67442722332991E-4]:5.268885720235E1)[&rate=0.001138742457675]:2.154863458634E0,((10[&rate=5.693488394719172E-4]:2.891708178318E1,31[&rate=4.917946820433468E-4]:2.891708178318E1)[&rate=5.01832757128293E-4]:3.918919204045E1,23[&rate=7.105010052262326E-4]:6.810627382363E1)[&rate=8.571313791585492E-4]:2.149685742031E0)[&rate=7.834629815825048E-4]:1.813461483081E0)[&rate=4.815703489265224E-4]:2.752350849416E0,(((((((2[&rate=5.503128366276395E-4]:1.863108152717E0,4[&rate=3.2924440927268884E-4]:1.863108152717E0)[&rate=5.407600076111336E-4]:7.062739622262E-1,3[&rate=4.258391030934407E-4]:2.569382114943E0)[&rate=5.884088346140905E-4]:8.865572541884E0,5[&rate=4.815703489265224E-4]:1.143495465683E1)[&rate=4.815703489265224E-4]:1.645825976172E0,((7[&rate=7.577054332286747E-4]:6.267239999755E0,6[&rate=9.107933275150232E-4]:6.267239999755E0)[&rate=0.0010972746274963384]:7.102673243353E-1,1[&rate=6.370048864304021E-4]:6.977507324091E0)[&rate=7.577054332286747E-4]:6.103273308908E0)[&rate=6.173264461345817E-4]:5.706705503968E1,((30[&rate=5.693488394719172E-4]:5.220321749523E1,26[&rate=6.076227722072069E-4]:5.220321749523E1)[&rate=0.0010972746274963384]:8.325065363347E0,32[&rate=3.691249468343066E-4]:6.052828285858E1)[&rate=4.493203179108345E-4]:9.619552814098E0)[&rate=7.334771449872476E-4]:1.23813962203E0,(16[&rate=6.571516114494879E-4]:3.258734143347E1,((22[&rate=6.470114601981507E-4]:3.644631111949E0,21[&rate=5.884088346140905E-4]:3.644631111949E0)[&rate=6.470114601981507E-4]:2.416175913257E0,20[&rate=5.01832757128293E-4]:6.060807025206E0)[&rate=0.001728086193297859]:2.652653440826E1)[&rate=7.834629815825048E-4]:3.879863386124E1)[&rate=7.970213146747608E-4]:1.791255909897E0,12[&rate=9.309998875255093E-4]:7.31772312046E1)[&rate=4.1319638832315115E-4]:1.644540693552E0)[&rate=5.693488394719172E-4]:3.558528860415E0,(17[&rate=0.0010299924486622707]:6.88307791847E1,(27[&rate=5.693488394719172E-4]:3.12501593069E1,28[&rate=9.761656507560791E-4]:3.12501593069E1)[&rate=9.107933275150232E-4]:3.75806198778E1)[&rate=4.1319638832315115E-4]:9.549521573873E0)[&rate=0.0011882455095299817]:4.628977945079E1); +tree STATE_400000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55152.56801412306,EEF_ucld_branchRates=-266.168517335019,lnP=-55152.56801412306,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.2143116109850275E-4]:7.371333017155E0,9[&rate=9.243896273527606E-4]:7.371333017155E0)[&rate=4.320494305691518E-4]:5.774922439934E0,15[&rate=4.4241165675095427E-4]:1.314625545709E1)[&rate=7.348719624978754E-4]:9.480576818865E1,(14[&rate=7.921028782321825E-4]:5.156130793655E1,24[&rate=0.0011208073610262943]:5.156130793655E1)[&rate=9.016713514689704E-4]:5.639071570919E1)[&rate=3.991784177105893E-4]:1.576140069055E1,(((25[&rate=5.301149232017577E-4]:7.214286862658E1,(((((((3[&rate=7.76922501270906E-4]:1.92517927403E0,4[&rate=4.4241165675095427E-4]:1.92517927403E0)[&rate=4.724016869662635E-4]:2.928273210258E-1,2[&rate=3.3196306360542464E-4]:2.218006595056E0)[&rate=7.091946380121143E-4]:7.562432133216E0,5[&rate=6.189368885360108E-4]:9.780438728271E0)[&rate=7.218287254781703E-4]:1.065147246923E0,((7[&rate=3.14307930029902E-4]:5.864933757487E0,6[&rate=5.589743498288685E-4]:5.864933757487E0)[&rate=9.490085674949967E-4]:1.058243372842E0,1[&rate=4.724016869662635E-4]:6.923177130329E0)[&rate=5.014227201882107E-4]:3.922408844865E0)[&rate=6.96931073996424E-4]:5.51397644001E1,((30[&rate=5.301149232017577E-4]:4.775472247423E1,26[&rate=5.7852336275327E-4]:4.775472247423E1)[&rate=0.0010767884114634642]:1.275928609319E1,32[&rate=3.6178564870811147E-4]:6.051400856743E1)[&rate=6.733809194994074E-4]:5.471341807872E0)[&rate=3.47576762527657E-4]:2.929387698761E0,(16[&rate=5.589743498288685E-4]:3.46514704311E1,((22[&rate=0.0011735239147742348]:2.384111406777E0,21[&rate=6.086278197703141E-4]:2.384111406777E0)[&rate=5.396939470711984E-4]:3.320402188739E0,20[&rate=4.724016869662635E-4]:5.704513595516E0)[&rate=0.0011735239147742348]:2.894695683558E1)[&rate=6.96931073996424E-4]:3.426326764296E1)[&rate=0.0010767884114634642]:1.494426114168E0,12[&rate=8.246511490347558E-4]:7.040916418823E1)[&rate=7.483678790655896E-4]:1.733704438351E0)[&rate=9.016713514689704E-4]:1.177610938923E0,((((33[&rate=7.483678790655896E-4]:5.038989168071E1,13[&rate=7.218287254781703E-4]:5.038989168071E1)[&rate=8.42213401981885E-4]:1.35547896939E1,(11[&rate=3.6178564870811147E-4]:1.943324981146E1,29[&rate=6.294124670515911E-4]:1.943324981146E1)[&rate=9.759209833962721E-4]:4.451143156315E1)[&rate=0.0011208073610262943]:1.343947474143E0,(19[&rate=7.218287254781703E-4]:1.75592756374E1,18[&rate=0.0011735239147742348]:1.75592756374E1)[&rate=5.301149232017577E-4]:4.772935321135E1)[&rate=5.589743498288685E-4]:5.813890438871E0,((10[&rate=8.607959559413742E-4]:2.5548783051E1,31[&rate=4.918131276484211E-4]:2.5548783051E1)[&rate=2.933981770285713E-4]:4.481214480848E1,23[&rate=5.589743498288685E-4]:7.036092785947E1)[&rate=5.493084311165247E-4]:7.415914281537E-1)[&rate=5.109968854932963E-4]:2.217960277873E0)[&rate=3.749699208862047E-4]:3.953912268302E0,(17[&rate=7.483678790655896E-4]:6.484224759831E1,(27[&rate=4.724016869662635E-4]:3.046498959083E1,28[&rate=8.80552282061555E-4]:3.046498959083E1)[&rate=6.294124670515911E-4]:3.437725800748E1)[&rate=6.086278197703141E-4]:1.243214423549E1)[&rate=0.0017586530372097429]:4.643903250249E1); +tree STATE_410000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55150.133720444865,EEF_ucld_branchRates=-266.168517335019,lnP=-55150.133720444865,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.766422114777086E-4]:7.951784480916E0,9[&rate=6.047437555840573E-4]:7.951784480916E0)[&rate=7.40156578254458E-4]:6.586973241007E0,15[&rate=9.099302745772548E-4]:1.453875772192E1)[&rate=8.486855463239783E-4]:1.003590937524E2,(14[&rate=0.0010563273878883752]:4.846156227806E1,24[&rate=8.486855463239783E-4]:4.846156227806E1)[&rate=8.307705446759234E-4]:6.64362891963E1)[&rate=4.910133617282512E-4]:1.459346207494E1,(((25[&rate=6.249254229570168E-4]:7.805696017883E1,((12[&rate=0.0010563273878883752]:7.085694669598E1,(16[&rate=4.4274104178984423E-4]:3.353236832647E1,((22[&rate=8.677226567719214E-4]:3.071112091619E0,21[&rate=5.003903374132837E-4]:3.071112091619E0)[&rate=7.022585782656087E-4]:3.83610902377E0,20[&rate=4.4274104178984423E-4]:6.907221115389E0)[&rate=0.0010985233305090317]:2.662514721108E1)[&rate=0.0010985233305090317]:3.732457836952E1)[&rate=6.047437555840573E-4]:4.111101488693E0,(((((3[&rate=7.271051455539042E-4]:2.266266773126E0,4[&rate=3.8882098567178866E-4]:2.266266773126E0)[&rate=6.675697168672942E-4]:2.648649564728E-1,2[&rate=4.326007555841311E-4]:2.531131729599E0)[&rate=4.815772193542227E-4]:9.269833153299E0,5[&rate=4.52672293887748E-4]:1.18009648829E1)[&rate=8.138310518335285E-4]:2.310096340039E0,((7[&rate=5.283643437170131E-4]:7.333077239801E0,6[&rate=5.470583698566775E-4]:7.333077239801E0)[&rate=5.470583698566775E-4]:1.182621543158E0,1[&rate=7.677535002570442E-4]:8.515698782959E0)[&rate=3.766422114777086E-4]:5.595362439978E0)[&rate=5.283643437170131E-4]:5.524457404096E1,((30[&rate=5.754851116474808E-4]:5.096180973678E1,26[&rate=5.948723463294537E-4]:5.096180973678E1)[&rate=0.0010985233305090317]:1.03824729774E1,32[&rate=3.6369068666469983E-4]:6.134428271418E1)[&rate=5.564671755217225E-4]:8.011352549713E0)[&rate=5.470583698566775E-4]:5.612412920784E0)[&rate=7.144863802592832E-4]:3.088911994149E0)[&rate=4.326007555841311E-4]:1.450280992016E0,((((33[&rate=7.677535002570442E-4]:5.871830151442E1,13[&rate=6.047437555840573E-4]:5.871830151442E1)[&rate=2.963309102482266E-4]:1.15501399618E1,(11[&rate=4.910133617282512E-4]:2.023830402893E1,29[&rate=4.6243386396627227E-4]:2.023830402893E1)[&rate=7.271051455539042E-4]:5.003013744729E1)[&rate=7.271051455539042E-4]:1.61249695507E0,(19[&rate=7.40156578254458E-4]:1.851221418041E1,18[&rate=9.594886893184676E-4]:1.851221418041E1)[&rate=4.720591972723551E-4]:5.336872425088E1)[&rate=3.169604142142069E-4]:5.022979306112E0,((10[&rate=5.376959500675665E-4]:2.935536322244E1,31[&rate=5.283643437170131E-4]:2.935536322244E1)[&rate=4.2220425430106363E-4]:4.636381929525E1,23[&rate=6.903847161940193E-4]:7.571918251769E1)[&rate=9.336141648540832E-4]:1.184735219707E0)[&rate=6.047437555840573E-4]:2.603323433441E0)[&rate=9.336141648540832E-4]:1.474788846355E0,(17[&rate=0.0010985233305090317]:7.075045125209E1,(27[&rate=3.3435489560117225E-4]:2.761212630369E1,28[&rate=0.0010985233305090317]:2.761212630369E1)[&rate=6.903847161940193E-4]:4.313832494839E1)[&rate=6.903847161940193E-4]:1.023157876511E1)[&rate=0.0014250307851622016]:4.85092835321E1); +tree STATE_420000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55116.83593303072,EEF_ucld_branchRates=-266.168517335019,lnP=-55116.83593303072,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.092973682369778E-4]:8.060782556834E0,9[&rate=7.746037149730546E-4]:8.060782556834E0)[&rate=3.975961699859585E-4]:5.975547478469E0,15[&rate=3.471559500473038E-4]:1.40363300353E1)[&rate=7.58403926511482E-4]:1.093602848342E2,(14[&rate=0.0012382428516624457]:4.564762184079E1,24[&rate=9.356645972038236E-4]:4.564762184079E1)[&rate=8.885196553705472E-4]:7.774899302874E1)[&rate=0.0011819441057802735]:1.971552740725E0,(((25[&rate=9.356645972038236E-4]:7.369126973327E1,(((((30[&rate=0.0010206639781805708]:5.007787415428E1,26[&rate=6.092973682369778E-4]:5.007787415428E1)[&rate=0.0012382428516624457]:7.632897190483E0,32[&rate=3.3302028591274796E-4]:5.771077134476E1)[&rate=5.189996389527853E-4]:1.006323172806E1,((((3[&rate=0.001054356109355308]:2.132783765295E0,4[&rate=6.092973682369778E-4]:2.132783765295E0)[&rate=5.519559364761127E-4]:3.814566800219E-1,2[&rate=3.975961699859585E-4]:2.514240445317E0)[&rate=6.335289800348366E-4]:8.019468491628E0,5[&rate=7.427930639598946E-4]:1.053370893694E1)[&rate=7.277152319532177E-4]:2.426887062449E0,((7[&rate=5.299071614124362E-4]:5.847478572219E0,6[&rate=7.131209903326558E-4]:5.847478572219E0)[&rate=7.131209903326558E-4]:1.549898373348E0,1[&rate=2.610905941049231E-4]:7.397376945567E0)[&rate=5.408865264278786E-4]:5.563219053826E0)[&rate=5.519559364761127E-4]:5.481340707343E1)[&rate=6.092973682369778E-4]:1.854217695752E0,(16[&rate=4.3190959316801987E-4]:3.16113296044E1,((22[&rate=4.2067570496534485E-4]:3.455921100593E0,21[&rate=9.113281350217953E-4]:3.455921100593E0)[&rate=7.746037149730546E-4]:3.690028761101E0,20[&rate=5.189996389527853E-4]:7.145949861694E0)[&rate=0.0011819441057802735]:2.44653797427E1)[&rate=0.0010206639781805708]:3.801689116418E1)[&rate=7.914560664644368E-4]:2.45381521705E0,12[&rate=7.427930639598946E-4]:7.208203598562E1)[&rate=0.0011819441057802735]:1.609233747644E0)[&rate=5.408865264278786E-4]:1.627948480364E0,((((11[&rate=4.539724453475416E-4]:1.87559331393E1,29[&rate=4.0925415404191666E-4]:1.87559331393E1)[&rate=8.670380065435516E-4]:4.864881124928E1,(33[&rate=7.131209903326558E-4]:5.899435075797E1,13[&rate=3.1787897140805405E-4]:5.899435075797E1)[&rate=4.8652019500267926E-4]:8.410393630618E0)[&rate=4.8652019500267926E-4]:1.311637410054E0,(19[&rate=6.852117437285137E-4]:1.610548758616E1,18[&rate=8.090339683384907E-4]:1.610548758616E1)[&rate=3.471559500473038E-4]:5.261089421248E1)[&rate=4.6486718363570207E-4]:3.728684058641E0,((10[&rate=5.189996389527853E-4]:2.72822168682E1,31[&rate=4.757082395003772E-4]:2.72822168682E1)[&rate=4.2067570496534485E-4]:4.38935302171E1,23[&rate=4.429967999702637E-4]:7.117574708531E1)[&rate=5.858866613893266E-4]:1.269318771976E0)[&rate=3.471559500473038E-4]:2.874152356349E0)[&rate=0.0013061357198836498]:2.295341078296E0,(17[&rate=0.0010917517960460775]:6.218671739863E1,(27[&rate=2.828227820082491E-4]:2.495792006173E1,28[&rate=0.0011819441057802735]:2.495792006173E1)[&rate=8.090339683384907E-4]:3.72287973369E1)[&rate=5.974999678977391E-4]:1.54278418933E1)[&rate=0.0015075662353491576]:4.775360831832E1); +tree STATE_430000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55143.62707319326,EEF_ucld_branchRates=-266.168517335019,lnP=-55143.62707319326,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.36898841972078E-4]:1.152562175907E1,9[&rate=6.171601789310594E-4]:1.152562175907E1)[&rate=4.1027688178626765E-4]:4.623137911131E0,15[&rate=4.910918773569259E-4]:1.61487596702E1)[&rate=9.67494161036723E-4]:1.061346939647E2,(14[&rate=8.362634715076573E-4]:4.916517676638E1,24[&rate=9.945609858323656E-4]:4.916517676638E1)[&rate=9.422701324698098E-4]:7.31182768685E1)[&rate=5.700089309541901E-4]:5.582807281296E0,(((25[&rate=8.005907206930626E-4]:7.211512458695E1,(((((((4[&rate=5.700089309541901E-4]:2.290688867676E0,3[&rate=5.022806034761005E-4]:2.290688867676E0)[&rate=5.358954207814464E-4]:1.950790084557E-1,2[&rate=2.691454807060742E-4]:2.485767876132E0)[&rate=7.36898841972078E-4]:7.214283601943E0,5[&rate=5.585502735964078E-4]:9.700051478075E0)[&rate=3.7194303055304275E-4]:2.662593034756E0,((7[&rate=6.171601789310594E-4]:4.902960285206E0,1[&rate=0.001090536317134817]:4.902960285206E0)[&rate=0.0011729288577020365]:5.583754379264E-1,6[&rate=0.0012812280776135524]:5.461335723133E0)[&rate=2.916041564078975E-4]:6.901308789698E0)[&rate=4.798736505049922E-4]:5.538467892393E1,((30[&rate=4.5724430401609327E-4]:4.602847285445E1,26[&rate=8.553163684859734E-4]:4.602847285445E1)[&rate=0.0013516512239710274]:8.636429119951E0,32[&rate=5.022806034761005E-4]:5.46649019744E1)[&rate=7.520163197295161E-4]:1.308242146236E1)[&rate=5.358954207814464E-4]:1.437886364054E0,(16[&rate=7.079910704497938E-4]:3.044461099312E1,((22[&rate=0.001222838170401524]:3.498120912697E0,21[&rate=4.3415137584271326E-4]:3.498120912697E0)[&rate=0.001222838170401524]:3.655726504628E0,20[&rate=3.434951012331937E-4]:7.153847417325E0)[&rate=0.001222838170401524]:2.329076357579E1)[&rate=8.180507633974024E-4]:3.874059880769E1)[&rate=0.001090536317134817]:1.910247468122E0,12[&rate=9.945609858323656E-4]:7.109545726893E1)[&rate=0.0015606389527030437]:1.01966731802E0)[&rate=4.6860050708666195E-4]:2.65339879787E0,((((11[&rate=4.2233601269041024E-4]:2.230994849511E1,29[&rate=5.700089309541901E-4]:2.230994849511E1)[&rate=7.83807632693299E-4]:4.320178864522E1,(33[&rate=7.520163197295161E-4]:5.812818043134E1,13[&rate=5.358954207814464E-4]:5.812818043134E1)[&rate=6.293753374725116E-4]:7.383556708998E0)[&rate=3.278408649272344E-4]:1.761786534665E0,(19[&rate=0.001222838170401524]:1.658559221799E1,18[&rate=9.186312818871136E-4]:1.658559221799E1)[&rate=5.471853843872274E-4]:5.0687931457E1)[&rate=8.005907206930626E-4]:4.10352458154E0,((10[&rate=7.83807632693299E-4]:2.530473825786E1,31[&rate=4.1027688178626765E-4]:2.530473825786E1)[&rate=3.5811116622777215E-4]:4.525064097248E1,23[&rate=6.051361993084924E-4]:7.055537923034E1)[&rate=3.5811116622777215E-4]:8.216690262E-1)[&rate=6.418032656418848E-4]:3.391475128285E0)[&rate=4.3415137584271326E-4]:4.078788239374E0,(17[&rate=7.36898841972078E-4]:6.712510113756E1,(27[&rate=4.5724430401609327E-4]:2.775594011772E1,28[&rate=0.0013516512239710274]:2.775594011772E1)[&rate=6.418032656418848E-4]:3.936916101985E1)[&rate=6.544667869737193E-4]:1.172221048663E1)[&rate=0.0010556056417642258]:4.901894929198E1); +tree STATE_440000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55163.0566640687,EEF_ucld_branchRates=-266.168517335019,lnP=-55163.0566640687,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.1364723603169415E-4]:1.139275051607E1,9[&rate=9.566030618547037E-4]:1.139275051607E1)[&rate=0.001179895957335951]:5.770316930091E0,15[&rate=7.600447801799036E-4]:1.716306744616E1)[&rate=7.600447801799036E-4]:9.998323456184E1,(14[&rate=0.0010863511466338925]:4.556629493498E1,24[&rate=5.427571526525709E-4]:4.556629493498E1)[&rate=8.447739525803825E-4]:7.158000707302E1)[&rate=9.843765523338056E-4]:1.048963900992E1,(((25[&rate=5.958509910204192E-4]:7.379309342242E1,(((((((4[&rate=4.709076597878086E-4]:2.27614325239E0,3[&rate=4.5010550650226045E-4]:2.27614325239E0)[&rate=6.410932246475564E-4]:4.778355151014E-1,2[&rate=6.06874422558011E-4]:2.753978767491E0)[&rate=7.307430271771541E-4]:7.519866274543E0,5[&rate=4.914429087496312E-4]:1.027384504203E1)[&rate=4.28808375615975E-4]:2.345039173513E0,((7[&rate=4.605528843845581E-4]:4.956261775547E0,6[&rate=7.916750320067183E-4]:4.956261775547E0)[&rate=4.0671318755713216E-4]:1.055102830929E0,1[&rate=5.849862932988999E-4]:6.011364606476E0)[&rate=5.958509910204192E-4]:6.607519609071E0)[&rate=4.0671318755713216E-4]:5.343760310762E1,((30[&rate=4.811963801543272E-4]:4.987166346244E1,26[&rate=4.5010550650226045E-4]:4.987166346244E1)[&rate=5.531646171567982E-4]:7.467485177969E0,32[&rate=5.427571526525709E-4]:5.733914864041E1)[&rate=6.902435589957447E-4]:8.71733868276E0)[&rate=2.955274522310136E-4]:2.016474447442E0,(16[&rate=7.033405037971843E-4]:3.050821524462E1,((22[&rate=0.0010863511466338925]:2.306551497058E0,21[&rate=0.0011295274001409004]:2.306551497058E0)[&rate=5.22139631897917E-4]:3.512340078137E0,20[&rate=9.566030618547037E-4]:5.818891575195E0)[&rate=0.0012404479804646658]:2.468932366942E1)[&rate=0.0011295274001409004]:3.7564746526E1)[&rate=9.073122229829523E-4]:3.555650802717E0,12[&rate=7.451322534158915E-4]:7.162861257333E1)[&rate=5.22139631897917E-4]:2.16448084909E0)[&rate=5.11894944429126E-4]:2.549270657262E0,((((11[&rate=3.5813749699567065E-4]:1.995259363422E1,29[&rate=5.427571526525709E-4]:1.995259363422E1)[&rate=7.916750320067183E-4]:4.866439766908E1,(33[&rate=9.310319952346989E-4]:6.222068451571E1,13[&rate=4.811963801543272E-4]:6.222068451571E1)[&rate=6.902435589957447E-4]:6.396306787589E0)[&rate=7.168271824929513E-4]:2.876559740585E0,(19[&rate=7.033405037971843E-4]:2.087112262279E1,18[&rate=7.755373666205899E-4]:2.087112262279E1)[&rate=3.5813749699567065E-4]:5.062242842109E1)[&rate=2.955274522310136E-4]:2.055901317466E0,((10[&rate=0.0011295274001409004]:2.028510020361E1,31[&rate=5.958509910204192E-4]:2.028510020361E1)[&rate=3.5813749699567065E-4]:5.301457426645E1,23[&rate=5.531646171567982E-4]:7.329967447006E1)[&rate=3.5813749699567065E-4]:2.497778912887E-1)[&rate=8.085328497048552E-4]:2.792911718337E0)[&rate=4.28808375615975E-4]:4.641397857471E0,(17[&rate=9.843765523338056E-4]:7.098929436644E1,(27[&rate=4.0671318755713216E-4]:2.853869573289E1,28[&rate=0.0011295274001409004]:2.853869573289E1)[&rate=8.851687102101727E-4]:4.245059863355E1)[&rate=6.180756706886097E-4]:9.99446757071E0)[&rate=0.0014189825699494466]:4.665217908076E1); +tree STATE_450000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55148.2659992959,EEF_ucld_branchRates=-266.168517335019,lnP=-55148.2659992959,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.232987831266526E-4]:1.033133938134E1,9[&rate=4.561232637733917E-4]:1.033133938134E1)[&rate=5.220746363554043E-4]:6.537715642796E0,15[&rate=4.561232637733917E-4]:1.686905502414E1)[&rate=0.0011417060849588118]:9.756420745765E1,(14[&rate=0.001300581201359919]:4.901029193218E1,24[&rate=0.001087664894161743]:4.901029193218E1)[&rate=9.398774866051818E-4]:6.542297054961E1)[&rate=8.045590579336359E-4]:1.397444675164E1,(((25[&rate=4.7491367418955963E-4]:7.547282011305E1,((((((4[&rate=2.644821601466702E-4]:2.034469200971E0,3[&rate=7.102774940841396E-4]:2.034469200971E0)[&rate=4.655308748747296E-4]:8.29116308815E-1,2[&rate=4.371508577483717E-4]:2.863585509786E0)[&rate=6.711099521424253E-4]:8.405843686242E0,5[&rate=5.711182213613161E-4]:1.126942919603E1)[&rate=5.125546484353467E-4]:1.931050426631E0,((7[&rate=4.655308748747296E-4]:5.461193777167E0,6[&rate=8.875961849584659E-4]:5.461193777167E0)[&rate=0.001004007070407935]:8.114450766337E-1,1[&rate=6.58872317535183E-4]:6.2726388538E0)[&rate=3.875416900286917E-4]:6.927840768858E0)[&rate=5.813289144783928E-4]:5.513674978097E1,((30[&rate=8.875961849584659E-4]:5.062133134173E1,26[&rate=4.275391870738175E-4]:5.062133134173E1)[&rate=7.102774940841396E-4]:8.831864313787E0,32[&rate=5.125546484353467E-4]:5.945319565552E1)[&rate=3.4260767251575373E-4]:8.884033748103E0)[&rate=3.5457847413339236E-4]:4.998310994841E0,((16[&rate=3.4260767251575373E-4]:3.639132245012E1,((22[&rate=5.610638990091058E-4]:3.299924617762E0,21[&rate=0.0010426466309727423]:3.299924617762E0)[&rate=0.0010426466309727423]:2.752428018233E0,20[&rate=6.022930327138082E-4]:6.052352635995E0)[&rate=0.0010426466309727423]:3.033896981412E1)[&rate=0.001087664894161743]:3.624433235831E1,12[&rate=7.86869153942783E-4]:7.263565480843E1)[&rate=5.511486963178487E-4]:6.998855900375E-1)[&rate=3.9785040202458105E-4]:2.137279714581E0)[&rate=6.967704947150089E-4]:1.596359032604E0,((((33[&rate=7.541394024416991E-4]:6.300959795757E1,13[&rate=4.1780764484490525E-4]:6.300959795757E1)[&rate=4.079239872053228E-4]:6.11190316598E0,(11[&rate=3.9785040202458105E-4]:1.872580103196E1,29[&rate=9.125539375635331E-4]:1.872580103196E1)[&rate=9.125539375635331E-4]:5.039570009159E1)[&rate=5.125546484353467E-4]:9.06139995389E-1,(19[&rate=6.967704947150089E-4]:1.673277014699E1,18[&rate=6.967704947150089E-4]:1.673277014699E1)[&rate=3.5457847413339236E-4]:5.329487097195E1)[&rate=5.220746363554043E-4]:5.196403086476E0,((10[&rate=7.541394024416991E-4]:2.371432695254E1,31[&rate=5.030944577033942E-4]:2.371432695254E1)[&rate=3.0128640822145794E-4]:5.058492138774E1,23[&rate=5.125546484353467E-4]:7.429924834028E1)[&rate=4.275391870738175E-4]:9.247958651345E-1)[&rate=6.711099521424253E-4]:1.845134940235E0)[&rate=2.8440633626505027E-4]:4.539229512897E0,(17[&rate=6.58872317535183E-4]:6.787753015151E1,(27[&rate=5.511486963178487E-4]:2.908377512096E1,28[&rate=6.469813398116507E-4]:2.908377512096E1)[&rate=7.38899489049755E-4]:3.879375503055E1)[&rate=5.511486963178487E-4]:1.373087850703E1)[&rate=9.701111338541598E-4]:4.679930057488E1); +tree STATE_460000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.15121103917,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.15121103917,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=9.58320052652337E-4]:9.917370284434E0,9[&rate=7.558683366650591E-4]:9.917370284434E0)[&rate=9.58320052652337E-4]:6.72168933197E0,15[&rate=4.873653727424797E-4]:1.66390596164E1)[&rate=7.376655003082962E-4]:1.01277871078E2,(14[&rate=8.424119681895423E-4]:5.228585992065E1,24[&rate=6.642633423202576E-4]:5.228585992065E1)[&rate=9.821210392412637E-4]:6.563107077372E1)[&rate=0.0010094648402290407]:1.110432101748E1,(((25[&rate=6.642633423202576E-4]:7.113215284788E1,(12[&rate=6.191788556231445E-4]:6.962133811125E1,((16[&rate=6.490804900764528E-4]:3.41592432395E1,((22[&rate=7.653553083664821E-4]:3.172697907715E0,21[&rate=7.288987895480033E-4]:3.172697907715E0)[&rate=7.46647349648209E-4]:3.36560197249E0,20[&rate=9.006673209293741E-4]:6.538299880205E0)[&rate=7.957363839002796E-4]:2.76209433593E1)[&rate=0.0010094648402290407]:3.301070367194E1,(((((4[&rate=5.25220665690973E-4]:1.945900460226E0,2[&rate=6.117303979298478E-4]:1.945900460226E0)[&rate=7.957363839002796E-4]:7.554255346163E-1,3[&rate=5.816561298068775E-4]:2.701325994842E0)[&rate=8.299049645692953E-4]:8.507007256796E0,5[&rate=4.028508951875334E-4]:1.120833325164E1)[&rate=6.490804900764528E-4]:1.984556720945E0,((7[&rate=0.0010094648402290407]:6.537688929881E0,6[&rate=6.191788556231445E-4]:6.537688929881E0)[&rate=9.821210392412637E-4]:1.537404003135E0,1[&rate=5.503604627194969E-4]:8.075092933016E0)[&rate=6.26625927855907E-4]:5.117797039567E0)[&rate=6.566426944566703E-4]:5.361291285682E1,((30[&rate=6.26625927855907E-4]:4.951386470312E1,26[&rate=7.20325598827176E-4]:4.951386470312E1)[&rate=7.20325598827176E-4]:7.707525540454E0,32[&rate=5.816561298068775E-4]:5.722139024358E1)[&rate=6.26625927855907E-4]:9.584412585824E0)[&rate=6.117303979298478E-4]:3.64144082039E-1)[&rate=9.371754865212938E-4]:2.451391199807E0)[&rate=6.875991059782978E-4]:1.510814736627E0)[&rate=5.421894483469605E-4]:4.383456773311E0,((((33[&rate=8.424119681895423E-4]:6.180551545639E1,13[&rate=5.816561298068775E-4]:6.180551545639E1)[&rate=9.821210392412637E-4]:3.596909227983E0,(11[&rate=5.338221630926207E-4]:1.829723166437E1,29[&rate=8.066360434131789E-4]:1.829723166437E1)[&rate=8.845871807936935E-4]:4.710519302001E1)[&rate=7.20325598827176E-4]:1.961616100934E0,(19[&rate=5.816561298068775E-4]:1.700360525548E1,18[&rate=5.163390225751973E-4]:1.700360525548E1)[&rate=5.892454840549115E-4]:5.036043552983E1)[&rate=5.421894483469605E-4]:5.272422970832E0,((10[&rate=7.558683366650591E-4]:2.041193952244E1,31[&rate=7.558683366650591E-4]:2.041193952244E1)[&rate=4.974935574478111E-4]:5.21590529451E1,23[&rate=4.223145514822773E-4]:7.257099246755E1)[&rate=4.7661204526549275E-4]:6.547128859509E-2)[&rate=5.421894483469605E-4]:2.879145865047E0)[&rate=5.25220665690973E-4]:3.06952148295E0,(17[&rate=6.490804900764528E-4]:7.076440290082E1,(27[&rate=4.7661204526549275E-4]:3.301381885508E1,28[&rate=9.006673209293741E-4]:3.301381885508E1)[&rate=9.006673209293741E-4]:3.775058404574E1)[&rate=4.223145514822773E-4]:7.820728203313E0)[&rate=0.0012115062208570117]:5.043612060771E1); +tree STATE_470000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55121.01874586179,EEF_ucld_branchRates=-266.168517335019,lnP=-55121.01874586179,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.903921839701618E-4]:8.794964528107E0,9[&rate=6.018189412430174E-4]:8.794964528107E0)[&rate=7.272041928845306E-4]:8.015520410645E0,15[&rate=6.133842058486565E-4]:1.681048493875E1)[&rate=8.55712449182472E-4]:9.74437531749E1,(14[&rate=0.0014130030090554655]:4.828728193551E1,24[&rate=0.0012069906838180118]:4.828728193551E1)[&rate=9.893666408741619E-4]:6.596695617814E1)[&rate=0.0010477314646046118]:1.413439249033E1,(((25[&rate=7.414032299773464E-4]:7.26588154657E1,(12[&rate=9.392638347537495E-4]:7.071109662228E1,((16[&rate=5.456996031230003E-4]:3.503167591089E1,((22[&rate=7.560327467222488E-4]:2.558518137187E0,21[&rate=2.812953196198735E-4]:2.558518137187E0)[&rate=7.272041928845306E-4]:3.611411690594E0,20[&rate=0.0010173325295676926]:6.169929827781E0)[&rate=0.0010173325295676926]:2.886174608311E1)[&rate=0.0011595525782494823]:3.517325790637E1,(((((4[&rate=0.001262396873947904]:2.034029564897E0,2[&rate=5.346877750942418E-4]:2.034029564897E0)[&rate=7.711360973744372E-4]:3.930551010657E-1,3[&rate=8.95196764909033E-4]:2.427084665963E0)[&rate=4.570980546077529E-4]:9.525534571891E0,5[&rate=3.7025977060695526E-4]:1.195261923785E1)[&rate=8.029651913281241E-4]:5.431875146376E-1,((7[&rate=3.038462543093595E-4]:6.336108954873E0,6[&rate=4.4562543690467124E-4]:6.336108954873E0)[&rate=5.678797294042159E-4]:1.389775907585E0,1[&rate=5.678797294042159E-4]:7.725884862458E0)[&rate=8.749524931669743E-4]:4.769921890034E0)[&rate=7.560327467222488E-4]:5.507744832267E1,((30[&rate=7.711360973744372E-4]:4.876305654613E1,26[&rate=5.790852457474122E-4]:4.876305654613E1)[&rate=8.749524931669743E-4]:8.791987850943E0,32[&rate=6.491065126259092E-4]:5.755504439708E1)[&rate=6.133842058486565E-4]:1.001821067808E1)[&rate=4.570980546077529E-4]:2.63167874211E0)[&rate=0.0011595525782494823]:5.061628050114E-1)[&rate=6.73988232656751E-4]:1.947718843423E0)[&rate=3.7025977060695526E-4]:2.793316101671E0,((((33[&rate=6.251071569200575E-4]:6.180289045846E1,13[&rate=4.6841049704828913E-4]:6.180289045846E1)[&rate=0.0012069906838180118]:7.111873652276E0,(11[&rate=4.6841049704828913E-4]:1.993705920974E1,29[&rate=4.3395001801355886E-4]:1.993705920974E1)[&rate=0.001118030890462913]:4.897770490099E1)[&rate=3.557075273118607E-4]:1.773553403919E0,(19[&rate=7.414032299773464E-4]:1.840838319713E1,18[&rate=9.634451628514214E-4]:1.840838319713E1)[&rate=4.0977644189713974E-4]:5.227993431752E1)[&rate=3.840105629385547E-4]:3.028160781328E0,((10[&rate=5.017289067601322E-4]:2.254128542759E1,31[&rate=7.86761927573887E-4]:2.254128542759E1)[&rate=3.038462543093595E-4]:4.971029190026E1,23[&rate=5.127233365941207E-4]:7.225157732785E1)[&rate=5.346877750942418E-4]:1.464900968134E0)[&rate=4.3395001801355886E-4]:1.73565327139E0)[&rate=5.237024496215998E-4]:5.626552132674E0,(17[&rate=6.251071569200575E-4]:7.242391153769E1,(27[&rate=5.790852457474122E-4]:2.933009619198E1,28[&rate=0.001262396873947904]:2.933009619198E1)[&rate=5.346877750942418E-4]:4.309381534571E1)[&rate=0.0012069906838180118]:8.654772162358E0)[&rate=0.001700966010148869]:4.730994690394E1); +tree STATE_480000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.28389994129,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.28389994129,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.416476800587375E-4]:9.175323198727E0,9[&rate=8.81637392631126E-4]:9.175323198727E0)[&rate=4.0365211433400933E-4]:1.016577951852E1,15[&rate=5.077521290574157E-4]:1.934110271725E1)[&rate=8.373762222087815E-4]:9.499505912713E1,(14[&rate=8.81637392631126E-4]:4.850668284874E1,24[&rate=8.81637392631126E-4]:4.850668284874E1)[&rate=0.0012942590695965192]:6.582947899564E1)[&rate=8.81637392631126E-4]:1.128709406523E1,(((25[&rate=7.484815606260926E-4]:7.697126489694E1,(12[&rate=5.971193189975581E-4]:7.571923713066E1,(((((4[&rate=4.421886462773825E-4]:1.63008556966E0,2[&rate=4.796199521178602E-4]:1.63008556966E0)[&rate=6.912762699321468E-4]:5.165068757513E-1,3[&rate=5.461778958701347E-4]:2.146592445411E0)[&rate=6.782756141985345E-4]:8.58407808428E0,5[&rate=6.912762699321468E-4]:1.073067052969E1)[&rate=9.97866307560264E-4]:1.897360537072E0,((7[&rate=4.134805400171214E-4]:6.280732818189E0,6[&rate=9.640162128342961E-4]:6.280732818189E0)[&rate=4.796199521178602E-4]:8.507618252859E-1,1[&rate=5.364266729118907E-4]:7.131494643475E0)[&rate=0.0010814344717814683]:5.496536423288E0)[&rate=5.461778958701347E-4]:6.128764183495E1,((16[&rate=4.702888738231305E-4]:3.95592343966E1,((22[&rate=9.97866307560264E-4]:3.352465394304E0,21[&rate=2.809333851935818E-4]:3.352465394304E0)[&rate=5.762357168141795E-4]:3.427888930574E0,20[&rate=6.416476800587375E-4]:6.780354324878E0)[&rate=0.0010364604000061603]:3.277888007172E1)[&rate=9.640162128342961E-4]:3.183890385105E1,((30[&rate=5.172293356021262E-4]:4.959345258508E1,26[&rate=4.889632369714898E-4]:4.959345258508E1)[&rate=7.811275860355237E-4]:1.184970378039E1,32[&rate=5.461778958701347E-4]:6.144315636546E1)[&rate=4.0365211433400933E-4]:9.954981882192E0)[&rate=0.0010814344717814683]:2.517534654056E0)[&rate=6.656962388618138E-4]:1.803564228948E0)[&rate=2.3570418262024737E-4]:1.25202776628E0)[&rate=5.461778958701347E-4]:2.144535010103E0,((((33[&rate=6.534986693941309E-4]:6.079857044699E1,13[&rate=3.5062551655000006E-4]:6.079857044699E1)[&rate=5.077521290574157E-4]:9.335333817692E0,(11[&rate=4.702888738231305E-4]:1.962193731175E1,29[&rate=8.17471803083172E-4]:1.962193731175E1)[&rate=7.643992794323553E-4]:5.051196695293E1)[&rate=6.656962388618138E-4]:2.018167810186E0,(19[&rate=7.643992794323553E-4]:1.595338176752E1,18[&rate=4.2315880846370514E-4]:1.595338176752E1)[&rate=3.2611827966180914E-4]:5.619869030735E1)[&rate=4.134805400171214E-4]:2.005866322007E0,((10[&rate=4.134805400171214E-4]:3.095103480164E1,31[&rate=5.267823652953253E-4]:3.095103480164E1)[&rate=2.6115998761590514E-4]:4.136199240674E1,23[&rate=3.7285159596457267E-4]:7.231302720837E1)[&rate=5.267823652953253E-4]:1.844911188503E0)[&rate=3.3873143128162645E-4]:4.957861510164E0)[&rate=3.2611827966180914E-4]:3.274385065651E0,(17[&rate=6.912762699321468E-4]:6.912099630025E1,(27[&rate=3.833874168821938E-4]:2.362461372805E1,28[&rate=0.0012031630998739756]:2.362461372805E1)[&rate=4.6095258627151326E-4]:4.549638257219E1)[&rate=6.534986693941309E-4]:1.326918867245E1)[&rate=0.0010814344717814683]:4.323307093691E1); +tree STATE_490000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55115.42485201572,EEF_ucld_branchRates=-266.168517335019,lnP=-55115.42485201572,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.993661700597225E-4]:1.007237490713E1,9[&rate=0.0011188144912762257]:1.007237490713E1)[&rate=9.717241410544799E-4]:6.563464890359E0,15[&rate=4.967616250179016E-4]:1.663583979749E1)[&rate=9.717241410544799E-4]:9.215411539525E1,(14[&rate=9.717241410544799E-4]:4.697928604194E1,24[&rate=9.717241410544799E-4]:4.697928604194E1)[&rate=0.0013843289170831215]:6.18106691508E1)[&rate=0.0012260635146358425]:1.560579065004E1,(((25[&rate=7.367249827358808E-4]:7.521115305144E1,(12[&rate=8.916418118869521E-4]:7.411825889759E1,((16[&rate=6.629959444581603E-4]:4.253811349395E1,((22[&rate=0.0012260635146358425]:3.080162127314E0,21[&rate=4.4304149761560885E-4]:3.080162127314E0)[&rate=0.001295983447611698]:4.404039927107E0,20[&rate=7.367249827358808E-4]:7.484202054421E0)[&rate=0.0011188144912762257]:3.505391143953E1)[&rate=0.0011681968364556275]:2.989296314995E1,(((((4[&rate=3.1328341953531965E-4]:1.873756929599E0,3[&rate=8.260551248241984E-4]:1.873756929599E0)[&rate=0.0011188144912762257]:2.923446797146E-1,2[&rate=2.432971043280034E-4]:2.166101609314E0)[&rate=5.407226102728706E-4]:9.814089484141E0,5[&rate=4.104525996158224E-4]:1.198019109345E1)[&rate=4.104525996158224E-4]:8.363485665157E-1,((7[&rate=5.185452834122342E-4]:6.969833430291E0,6[&rate=7.057757756601106E-4]:6.969833430291E0)[&rate=6.91075365115733E-4]:8.556607301392E-1,1[&rate=8.466619727355138E-4]:7.825494160431E0)[&rate=5.407226102728706E-4]:4.991045499539E0)[&rate=7.057757756601106E-4]:5.90107076166E1,((30[&rate=7.367249827358808E-4]:5.096867388117E1,26[&rate=5.634398566772426E-4]:5.096867388117E1)[&rate=6.236294947204623E-4]:1.076414590119E1,32[&rate=4.7522509091727053E-4]:6.173281978235E1)[&rate=3.402159907216902E-4]:1.009442749422E1)[&rate=3.402159907216902E-4]:6.03829367325E-1)[&rate=7.530821232168362E-4]:1.687182253689E0)[&rate=1.7332238973008653E-4]:1.092894153849E0)[&rate=7.209753716797267E-4]:7.263118055109E-1,((((33[&rate=0.0012260635146358425]:6.218100664367E1,13[&rate=4.6450180383505085E-4]:6.218100664367E1)[&rate=4.6450180383505085E-4]:4.858664704269E0,(11[&rate=3.402159907216902E-4]:2.087923224457E1,29[&rate=4.7522509091727053E-4]:2.087923224457E1)[&rate=7.057757756601106E-4]:4.616043910337E1)[&rate=3.766261268532619E-4]:3.027726483484E0,(19[&rate=4.859718327290386E-4]:2.221025571468E1,18[&rate=5.750481989328416E-4]:2.221025571468E1)[&rate=5.634398566772426E-4]:4.785714211674E1)[&rate=2.643712018862542E-4]:3.908415532634E0,((10[&rate=5.634398566772426E-4]:2.617195892873E1,31[&rate=8.260551248241984E-4]:2.617195892873E1)[&rate=4.32258340873292E-4]:4.552112921E1,23[&rate=5.52004431813319E-4]:7.169308813873E1)[&rate=3.648682869456277E-4]:2.282725225325E0)[&rate=4.104525996158224E-4]:1.961651492891E0)[&rate=5.295756701642406E-4]:4.405560058427E0,(17[&rate=9.163938436759233E-4]:6.762383179613E1,(27[&rate=5.076133166137283E-4]:2.316998328212E1,28[&rate=0.0010374611939101218]:2.316998328212E1)[&rate=5.634398566772426E-4]:4.4453848514E1)[&rate=3.993661700597225E-4]:1.271919311925E1)[&rate=8.065045693848432E-4]:4.40527209274E1); +tree STATE_500000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.18176665891,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.18176665891,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.298321747805971E-4]:8.926077141994E0,9[&rate=5.098014800557814E-4]:8.926077141994E0)[&rate=5.797546726975919E-4]:5.895421121031E0,15[&rate=9.311345773501672E-4]:1.482149826303E1)[&rate=9.071435278373359E-4]:9.214611236725E1,(14[&rate=8.64053173799864E-4]:4.471062663548E1,24[&rate=8.085272099171182E-4]:4.471062663548E1)[&rate=0.001017182023589903]:6.22569839948E1)[&rate=3.4804974253268374E-4]:2.045836796218E1,(((25[&rate=7.051510156315295E-4]:7.427936923258E1,(12[&rate=7.319567352429002E-4]:7.277747181185E1,((16[&rate=2.524159873691496E-4]:4.342237738975E1,((22[&rate=7.607097920610128E-4]:3.106947671448E0,21[&rate=4.1927726809892464E-4]:3.106947671448E0)[&rate=0.0010525167703305186]:4.927158194689E0,20[&rate=5.593795164657857E-4]:8.034105866138E0)[&rate=0.001361412288337391]:3.538827152362E1)[&rate=0.001139697078932122]:2.44355030499E1,(((30[&rate=7.051510156315295E-4]:4.913604600899E1,26[&rate=4.5038037338634274E-4]:4.913604600899E1)[&rate=0.0010927882243427966]:9.438845907125E0,32[&rate=4.1927726809892464E-4]:5.857489191612E1)[&rate=5.593795164657857E-4]:7.741087268014E0,((((4[&rate=4.401866362606015E-4]:1.880209648595E0,3[&rate=0.0011959932240387123]:1.880209648595E0)[&rate=9.311345773501672E-4]:2.578154192803E-1,2[&rate=5.593795164657857E-4]:2.138025067875E0)[&rate=5.797546726975919E-4]:7.513253980305E0,5[&rate=2.524159873691496E-4]:9.65127904818E0)[&rate=5.797546726975919E-4]:1.834923137826E0,((7[&rate=4.901640783806549E-4]:6.863125372139E0,6[&rate=0.0012665618454707698]:6.863125372139E0)[&rate=5.294812868548803E-4]:2.013059013777E0,1[&rate=3.7391995857626606E-4]:8.876184385916E0)[&rate=5.294812868548803E-4]:2.61001780009E0)[&rate=5.493411006228633E-4]:5.482977699812E1)[&rate=4.704166482711794E-4]:1.541901255528E0)[&rate=0.001139697078932122]:4.919591372196E0)[&rate=3.002969507453368E-4]:1.501897420722E0)[&rate=3.7391995857626606E-4]:2.312443354412E0,((((33[&rate=6.678432116788791E-4]:6.117049563885E1,13[&rate=4.901640783806549E-4]:6.117049563885E1)[&rate=5.098014800557814E-4]:7.474029976301E0,(11[&rate=4.0847442397386636E-4]:2.137613326863E1,29[&rate=7.319567352429002E-4]:2.137613326863E1)[&rate=9.856590963243962E-4]:4.726839234652E1)[&rate=5.493411006228633E-4]:1.300152449606E0,(19[&rate=6.923651984058906E-4]:2.110429992219E1,18[&rate=7.183344710528051E-4]:2.110429992219E1)[&rate=3.7391995857626606E-4]:4.884037814256E1)[&rate=8.085272099171182E-4]:4.517893638592E0,((10[&rate=7.183344710528051E-4]:2.214475326808E1,31[&rate=9.311345773501672E-4]:2.214475326808E1)[&rate=4.901640783806549E-4]:4.955608998721E1,23[&rate=5.695119055999947E-4]:7.170084325529E1)[&rate=4.5038037338634274E-4]:2.761728448056E0)[&rate=8.085272099171182E-4]:2.129240883638E0)[&rate=9.311345773501672E-4]:2.859769623343E0,(17[&rate=8.260330825531068E-4]:6.735196228108E1,(27[&rate=5.797546726975919E-4]:2.312381151146E1,28[&rate=0.001139697078932122]:2.312381151146E1)[&rate=6.22173872862128E-4]:4.422815076962E1)[&rate=4.298321747805971E-4]:1.209961992925E1)[&rate=7.319567352429002E-4]:4.797439638212E1); +tree STATE_510000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55116.849533700675,EEF_ucld_branchRates=-266.168517335019,lnP=-55116.849533700675,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.910427612096587E-4]:9.215349933569E0,9[&rate=5.501216391566024E-4]:9.215349933569E0)[&rate=4.6532647097698507E-4]:4.849910715156E0,15[&rate=5.079163566907611E-4]:1.406526064872E1)[&rate=0.0011822215854517017]:9.902962064568E1,(14[&rate=9.200652144026194E-4]:4.468140251623E1,24[&rate=9.474888742045157E-4]:4.468140251623E1)[&rate=0.001057570010689034]:6.841347877817E1)[&rate=8.731765312462565E-4]:1.461334011222E1,(((25[&rate=5.673128550481002E-4]:7.317889135851E1,(12[&rate=8.337817656036431E-4]:7.190483647735E1,((16[&rate=3.89048828079217E-4]:3.983845827838E1,((22[&rate=6.821539077189937E-4]:2.881326462653E0,21[&rate=5.586814378508679E-4]:2.881326462653E0)[&rate=8.954873241288645E-4]:4.235615029541E0,20[&rate=5.416198104063832E-4]:7.116941492194E0)[&rate=8.527128642422193E-4]:3.272151678619E1)[&rate=9.785875185432515E-4]:2.93413585911E1,(((30[&rate=7.047425992577877E-4]:4.704759672597E1,26[&rate=4.385885551710071E-4]:4.704759672597E1)[&rate=0.0011822215854517017]:8.536288423309E0,32[&rate=4.2930933271327057E-4]:5.558388514928E1)[&rate=6.608884803368227E-4]:1.030513697316E1,((((4[&rate=5.079163566907611E-4]:1.92491595106E0,3[&rate=4.8254398571838673E-4]:1.92491595106E0)[&rate=3.77788386929944E-4]:5.372642353395E-1,2[&rate=4.2930933271327057E-4]:2.462180186399E0)[&rate=5.331623176886331E-4]:8.996231323298E0,5[&rate=3.384648673864899E-4]:1.14584115097E1)[&rate=7.552029391535711E-4]:1.216394710657E0,((7[&rate=2.349627436915301E-4]:6.136898338248E0,6[&rate=5.673128550481002E-4]:6.136898338248E0)[&rate=2.7747174547969165E-4]:1.479416507753E0,1[&rate=6.821539077189937E-4]:7.616314846E0)[&rate=3.89048828079217E-4]:5.058491374353E0)[&rate=4.910427612096587E-4]:5.321421590208E1)[&rate=5.760297040177264E-4]:3.290794747053E0)[&rate=7.417982692021216E-4]:2.725019607864E0)[&rate=0.001014610504494141]:1.274054881165E0)[&rate=5.416198104063832E-4]:4.335138604844E-1,((((33[&rate=6.407055419574229E-4]:5.777635482072E1,13[&rate=6.02836580015016E-4]:5.777635482072E1)[&rate=6.608884803368227E-4]:1.113239736631E1,(11[&rate=4.2930933271327057E-4]:1.64333136058E1,29[&rate=5.247353850346139E-4]:1.64333136058E1)[&rate=4.385885551710071E-4]:5.247543858123E1)[&rate=4.6532647097698507E-4]:9.903250991036E-1,(19[&rate=5.331623176886331E-4]:1.984748372292E1,18[&rate=4.2930933271327057E-4]:1.984748372292E1)[&rate=5.416198104063832E-4]:5.005159356321E1)[&rate=5.673128550481002E-4]:1.583039874778E0,((10[&rate=0.001014610504494141]:2.167228493514E1,31[&rate=7.047425992577877E-4]:2.167228493514E1)[&rate=3.527957692476854E-4]:4.962247949485E1,23[&rate=4.739789464021182E-4]:7.129476442999E1)[&rate=7.996019129241082E-4]:1.873527309251E-1)[&rate=8.731765312462565E-4]:2.130288058087E0)[&rate=7.552029391535711E-4]:2.860329415735E0,(17[&rate=0.001014610504494141]:6.600773409665E1,(27[&rate=6.93265568762115E-4]:2.530216888307E1,28[&rate=7.166252601397205E-4]:2.530216888307E1)[&rate=8.337817656036431E-4]:4.070556521358E1)[&rate=6.713720785286924E-4]:1.046500053808E1)[&rate=7.692454991186107E-4]:5.123548677189E1); +tree STATE_520000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.823604281606,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.823604281606,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.232213473755196E-4]:1.035353679828E1,9[&rate=7.437681029232861E-4]:1.035353679828E1)[&rate=3.131642058071029E-4]:6.048165392619E0,15[&rate=5.232213473755196E-4]:1.64017021909E1)[&rate=9.114692276400761E-4]:9.799074366912E1,(14[&rate=0.0012797017562859775]:4.549009962948E1,24[&rate=0.001215455152438007]:4.549009962948E1)[&rate=0.0012797017562859775]:6.890234623054E1)[&rate=7.613740363777602E-4]:1.373678182809E1,(((25[&rate=6.503714944243865E-4]:7.183972432309E1,(12[&rate=7.10526390199814E-4]:7.027209405956E1,((16[&rate=3.2654791246420186E-4]:3.955336088869E1,((22[&rate=8.625648600184429E-4]:4.587953920268E0,21[&rate=0.0015911777865492743]:4.587953920268E0)[&rate=7.268402115162747E-4]:3.079896582305E0,20[&rate=4.3264887090995835E-4]:7.667850502573E0)[&rate=0.0011607922742710819]:3.188551038611E1)[&rate=0.0011132167035946827]:2.81894904458E1,(((30[&rate=9.989341790439031E-4]:4.702079987503E1,26[&rate=8.40216200991262E-4]:4.702079987503E1)[&rate=8.40216200991262E-4]:9.388127470311E0,32[&rate=5.001354973478715E-4]:5.640892734535E1)[&rate=5.837142657924837E-4]:9.62548372109E0,((((4[&rate=3.7573592875987714E-4]:2.236939827451E0,3[&rate=6.795214344061895E-4]:2.236939827451E0)[&rate=0.0011607922742710819]:6.579318842353E-1,2[&rate=1.5918260357054685E-4]:2.894871711686E0)[&rate=3.8736050409199867E-4]:7.733350821344E0,5[&rate=5.349626549996772E-4]:1.062822253303E1)[&rate=5.349626549996772E-4]:2.334880805426E0,((7[&rate=2.0174303554877063E-4]:6.496224529979E0,6[&rate=2.67766647113527E-4]:6.496224529979E0)[&rate=4.3264887090995835E-4]:1.351624366122E0,1[&rate=5.11618703672492E-4]:7.847848896101E0)[&rate=4.55010874229066E-4]:5.115254442355E0)[&rate=5.11618703672492E-4]:5.307130772798E1)[&rate=3.8736050409199867E-4]:1.708440268052E0)[&rate=0.0012797017562859775]:2.529242725072E0)[&rate=6.947701818791127E-4]:1.567630263528E0)[&rate=9.384503242818684E-4]:1.247668858722E0,((((33[&rate=0.0010710865400343954]:5.382847583791E1,13[&rate=5.001354973478715E-4]:5.382847583791E1)[&rate=7.268402115162747E-4]:1.318307610256E1,(11[&rate=3.8736050409199867E-4]:1.823093829742E1,29[&rate=3.7573592875987714E-4]:1.823093829742E1)[&rate=8.190467787222734E-4]:4.878061364305E1)[&rate=0.0014564064571970226]:6.499560280784E-1,(19[&rate=5.232213473755196E-4]:1.891512268222E1,18[&rate=3.131642058071029E-4]:1.891512268222E1)[&rate=4.55010874229066E-4]:4.874638528633E1)[&rate=7.437681029232861E-4]:4.438778721003E0,((10[&rate=4.3264887090995835E-4]:2.31208459947E1,31[&rate=5.712167110770655E-4]:2.31208459947E1)[&rate=4.101752121645793E-4]:4.853928134726E1,23[&rate=5.589399194084568E-4]:7.166012734196E1)[&rate=4.7745073158596946E-4]:4.40159347595E-1)[&rate=3.988270581776256E-4]:9.871064922555E-1)[&rate=5.232213473755196E-4]:3.415118427732E0,(17[&rate=0.0011607922742710819]:6.535871419895E1,(27[&rate=5.964554918672745E-4]:2.594268256355E1,28[&rate=7.989228637558189E-4]:2.594268256355E1)[&rate=9.989341790439031E-4]:3.94160316354E1)[&rate=2.67766647113527E-4]:1.114379741059E1)[&rate=9.67484243199535E-4]:5.162671607857E1); +tree STATE_530000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55163.44126803382,EEF_ucld_branchRates=-266.168517335019,lnP=-55163.44126803382,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.201048767733785E-4]:1.054363450262E1,9[&rate=9.75614857768924E-4]:1.054363450262E1)[&rate=0.0010493515666699235]:5.443612522737E0,15[&rate=7.663262708529015E-4]:1.598724702536E1)[&rate=0.0011558145152787455]:9.726411665777E1,(14[&rate=0.0011558145152787455]:4.306323131585E1,24[&rate=0.0010097378883991146]:4.306323131585E1)[&rate=7.663262708529015E-4]:7.018813236727E1)[&rate=2.6394892594411334E-4]:1.628136163997E1,(((25[&rate=6.876739554861498E-4]:7.446905660393E1,(12[&rate=8.514817575760763E-4]:7.298561782653E1,((16[&rate=4.8463060525152E-4]:3.610427930663E1,((22[&rate=5.023774897964199E-4]:4.366270421273E0,21[&rate=4.757067799012534E-4]:4.366270421273E0)[&rate=4.576593997240058E-4]:2.893479836162E0,20[&rate=0.0013550446420612257]:7.259750257434E0)[&rate=0.0010097378883991146]:2.884452904919E1)[&rate=0.0010493515666699235]:3.555870610436E1,(((30[&rate=7.663262708529015E-4]:4.817816971721E1,26[&rate=7.119398960795844E-4]:4.817816971721E1)[&rate=6.761097152885578E-4]:8.989158965177E0,32[&rate=3.261226972354699E-4]:5.716732868239E1)[&rate=4.484897146270448E-4]:1.11339376383E1,((((4[&rate=4.667236286710051E-4]:2.515328364405E0,3[&rate=4.484897146270448E-4]:2.515328364405E0)[&rate=8.943721715114734E-4]:3.492486234522E-1,2[&rate=5.023774897964199E-4]:2.864576987858E0)[&rate=5.651434725957474E-4]:8.358652686143E0,5[&rate=5.379381007034858E-4]:1.1223229674E1)[&rate=5.379381007034858E-4]:2.938961401615E0,((7[&rate=6.432838617446894E-4]:7.184478180578E0,6[&rate=9.75614857768924E-4]:7.184478180578E0)[&rate=5.9324817835396E-4]:9.872760268561E-1,1[&rate=2.6394892594411334E-4]:8.171754207435E0)[&rate=6.328704041039596E-4]:5.990436868182E0)[&rate=4.2971860674979374E-4]:5.413907524507E1)[&rate=4.2004725843633835E-4]:3.361719090292E0)[&rate=5.837546656929196E-4]:1.322632415549E0)[&rate=6.996043039539798E-4]:1.483438777394E0)[&rate=4.576593997240058E-4]:2.194873190178E0,((((33[&rate=9.45584024423162E-4]:5.224933569739E1,13[&rate=3.6660222528416914E-4]:5.224933569739E1)[&rate=5.469313337905441E-4]:1.62567902815E1,(11[&rate=4.2971860674979374E-4]:1.645071020638E1,29[&rate=4.391868214781889E-4]:1.645071020638E1)[&rate=6.996043039539798E-4]:5.205541577251E1)[&rate=8.720767409869332E-4]:2.65260630808E0,(19[&rate=5.201048767733785E-4]:1.906285676237E1,18[&rate=5.379381007034858E-4]:1.906285676237E1)[&rate=3.7824515710972576E-4]:5.20958755246E1)[&rate=6.539442079494355E-4]:2.921514265764E0,((10[&rate=5.469313337905441E-4]:2.384582496567E1,31[&rate=7.815038390866138E-4]:2.384582496567E1)[&rate=4.391868214781889E-4]:4.932380247273E1,23[&rate=3.6660222528416914E-4]:7.31696274384E1)[&rate=5.559949489613297E-4]:9.1061911433E-1)[&rate=5.651434725957474E-4]:2.583683241375E0)[&rate=7.247251210228187E-4]:4.999013575194E0,(17[&rate=8.323181083164893E-4]:7.248730482138E1,(27[&rate=3.261226972354699E-4]:3.010605352956E1,28[&rate=6.996043039539798E-4]:3.010605352956E1)[&rate=5.290007964546677E-4]:4.238125129183E1)[&rate=7.974822302799315E-4]:9.175638547915E0)[&rate=9.187184814769398E-4]:4.78697819538E1); +tree STATE_540000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.64843165622,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.64843165622,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.1544630886002277E-4]:8.49696429966E0,9[&rate=7.740005924705696E-4]:8.49696429966E0)[&rate=3.8270742006460786E-4]:1.070528155984E1,15[&rate=5.146739461508534E-4]:1.92022458595E1)[&rate=7.546548618267146E-4]:9.697872648995E1,(14[&rate=0.001043052882194593]:4.319250123461E1,24[&rate=9.415824654162893E-4]:4.319250123461E1)[&rate=8.432654267620295E-4]:7.298847111485E1)[&rate=5.91111588288605E-4]:1.013136631051E1,(((25[&rate=6.749655337476249E-4]:7.34324878173E1,(12[&rate=7.949740740800204E-4]:7.099561107078E1,(((((4[&rate=8.716562288123177E-4]:1.920074935662E0,3[&rate=5.059551038038673E-4]:1.920074935662E0)[&rate=6.018250631942973E-4]:4.315739985634E-1,2[&rate=3.9099966544364214E-4]:2.351648934226E0)[&rate=7.949740740800204E-4]:8.825448642872E0,5[&rate=2.9807174608839534E-4]:1.11770975771E1)[&rate=7.198687306549479E-4]:3.843137786695E0,((7[&rate=3.19532167345864E-4]:7.494835048531E0,6[&rate=5.607602709078258E-4]:7.494835048531E0)[&rate=4.4772218031424027E-4]:1.448253681459E0,1[&rate=4.396399400779238E-4]:8.94308872999E0)[&rate=4.558368247207318E-4]:6.077146633803E0)[&rate=3.9920620533767274E-4]:5.440209228832E1,((16[&rate=4.888870165694634E-4]:3.147126558319E1,((22[&rate=9.866500034351427E-4]:3.227367949579E0,21[&rate=2.730962636426102E-4]:3.227367949579E0)[&rate=4.4772218031424027E-4]:3.951502914051E0,20[&rate=4.63997346369957E-4]:7.17887086363E0)[&rate=9.415824654162893E-4]:2.429239471956E1)[&rate=7.040637712632229E-4]:3.418981262427E1,((30[&rate=7.740005924705696E-4]:4.552274415666E1,26[&rate=6.128888776878361E-4]:4.552274415666E1)[&rate=8.716562288123177E-4]:1.129172656385E1,32[&rate=4.805091291950616E-4]:5.681447072051E1)[&rate=3.657639590082731E-4]:8.846607486954E0)[&rate=1.8096793942142306E-4]:3.761249444651E0)[&rate=3.8270742006460786E-4]:1.573283418672E0)[&rate=2.1828524085340813E-4]:2.436876746518E0)[&rate=6.749655337476249E-4]:2.590409415463E0,((((33[&rate=0.001043052882194593]:5.756713617157E1,13[&rate=4.973643271448267E-4]:5.756713617157E1)[&rate=3.0912465322280563E-4]:9.488036374929E0,(11[&rate=2.861676373104266E-4]:1.703832895183E1,29[&rate=5.511507164822027E-4]:1.703832895183E1)[&rate=6.243402339958394E-4]:5.001684359468E1)[&rate=3.9920620533767274E-4]:7.713487384743E-1,(19[&rate=4.1544630886002277E-4]:1.690856412599E1,18[&rate=4.4772218031424027E-4]:1.690856412599E1)[&rate=4.63997346369957E-4]:5.091795715899E1)[&rate=6.128888776878361E-4]:5.362488354827E0,((10[&rate=4.315762700997127E-4]:2.773016396781E1,31[&rate=3.7430495031497753E-4]:2.773016396781E1)[&rate=3.7430495031497753E-4]:4.325021165949E1,23[&rate=4.722170298689768E-4]:7.09803756273E1)[&rate=6.36221375318579E-4]:2.208634012505E0)[&rate=4.315762700997127E-4]:2.833887592961E0)[&rate=5.607602709078258E-4]:2.399667879747E0,(17[&rate=6.128888776878361E-4]:6.923371843241E1,(27[&rate=3.657639590082731E-4]:2.954101293763E1,28[&rate=9.415824654162893E-4]:2.954101293763E1)[&rate=6.749655337476249E-4]:3.969270549478E1)[&rate=3.570512072351533E-4]:9.188846680103E0)[&rate=0.00148894014222946]:4.788977354745E1); +tree STATE_550000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55134.59420464524,EEF_ucld_branchRates=-266.168517335019,lnP=-55134.59420464524,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.0857996776311396E-4]:7.51753793572E0,9[&rate=0.00131327095201233]:7.51753793572E0)[&rate=3.0685045729211575E-4]:1.031588819086E1,15[&rate=3.331700369401996E-4]:1.783342612658E1)[&rate=4.850535740356478E-4]:1.065205524083E2,(14[&rate=0.0014585732984469415]:4.686289567482E1,24[&rate=9.122906086085098E-4]:4.686289567482E1)[&rate=5.23475402240839E-4]:7.749108286002E1)[&rate=4.850535740356478E-4]:4.798231349371E0,(((25[&rate=8.866459836223538E-4]:7.087447795066E1,(12[&rate=0.0010927505659392418]:6.902907632155E1,((16[&rate=5.041335834672442E-4]:3.13860875794E1,((22[&rate=7.661981008276918E-4]:2.867886070863E0,21[&rate=5.041335834672442E-4]:2.867886070863E0)[&rate=3.0685045729211575E-4]:5.319638090645E0,20[&rate=4.850535740356478E-4]:8.187524161508E0)[&rate=0.0010462730575621628]:2.319856341789E1)[&rate=0.0010927505659392418]:3.646377153606E1,(((30[&rate=7.050691306337577E-4]:4.70082722327E1,26[&rate=6.912865481536104E-4]:4.70082722327E1)[&rate=0.0010064260698355039]:1.032759685318E1,32[&rate=4.7557182167836136E-4]:5.733586908588E1)[&rate=4.6610673813248936E-4]:6.418063770402E0,((((4[&rate=2.298897225265997E-4]:1.79737082489E0,3[&rate=8.014732461513778E-4]:1.79737082489E0)[&rate=4.376296554408738E-4]:5.5437501245E-1,2[&rate=0.0010064260698355039]:2.35174583734E0)[&rate=8.206741331456585E-4]:8.087774116945E0,5[&rate=1.8822984901575211E-4]:1.043951995428E1)[&rate=4.945687614974984E-4]:5.353450158287E0,((7[&rate=5.432052038311832E-4]:8.573923413854E0,6[&rate=0.0010064260698355039]:8.573923413854E0)[&rate=4.183683141949107E-4]:2.467099586204E0,1[&rate=4.183683141949107E-4]:1.104102300006E1)[&rate=4.945687614974984E-4]:4.751947112513E0)[&rate=5.432052038311832E-4]:4.796096274371E1)[&rate=6.287664797437637E-4]:4.09592625918E0)[&rate=0.0010927505659392418]:1.179217206082E0)[&rate=4.471551054370444E-4]:1.845401629109E0)[&rate=7.050691306337577E-4]:2.319713134926E0,((((33[&rate=8.630325009411359E-4]:5.626872348351E1,13[&rate=5.33283852856344E-4]:5.626872348351E1)[&rate=6.651233360779689E-4]:1.011592092219E1,(11[&rate=3.9864520232109194E-4]:1.637158360417E1,29[&rate=6.060686814467614E-4]:1.637158360417E1)[&rate=7.661981008276918E-4]:5.001306080153E1)[&rate=5.634525268602962E-4]:2.821872248993E0,(19[&rate=4.2804226378353484E-4]:1.798350365984E1,18[&rate=6.287664797437637E-4]:1.798350365984E1)[&rate=6.779866359722978E-4]:5.122301299486E1)[&rate=3.0685045729211575E-4]:2.015205797606E0,((10[&rate=7.050691306337577E-4]:2.090674851784E1,31[&rate=4.2804226378353484E-4]:2.090674851784E1)[&rate=3.885265160918255E-4]:4.980861699718E1,23[&rate=4.376296554408738E-4]:7.071536551502E1)[&rate=9.403888271399568E-4]:5.06356937276E-1)[&rate=5.23475402240839E-4]:1.972468633285E0)[&rate=4.0857996776311396E-4]:3.033314864789E0,(17[&rate=8.630325009411359E-4]:6.460903667277E1,(27[&rate=5.738130285130736E-4]:3.070426483557E1,28[&rate=7.661981008276918E-4]:3.070426483557E1)[&rate=7.342993838688267E-4]:3.39047718372E1)[&rate=3.4514541100480353E-4]:1.161846927761E1)[&rate=0.0017813912757089552]:5.292470393383E1); +tree STATE_560000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.49960113931,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.49960113931,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.29300076273655E-4]:9.113279101986E0,9[&rate=7.412115019669526E-4]:9.113279101986E0)[&rate=4.38539045385934E-4]:8.912648106391E0,15[&rate=3.450627957153178E-4]:1.802592720838E1)[&rate=8.410830254880806E-4]:1.038165286725E2,(14[&rate=6.654188240603583E-4]:5.575563303631E1,24[&rate=8.841372330175281E-4]:5.575563303631E1)[&rate=7.412115019669526E-4]:6.60868228446E1)[&rate=0.0010399707859636035]:7.137555708792E0,(((25[&rate=8.410830254880806E-4]:7.296124628874E1,(12[&rate=6.769819427416583E-4]:7.191326403401E1,((16[&rate=3.172825825495252E-4]:3.190469999487E1,((22[&rate=0.0013483774972040418]:2.78072219906E0,21[&rate=5.009300681510649E-4]:2.78072219906E0)[&rate=3.573261054357738E-4]:5.089317278484E0,20[&rate=5.097594125789705E-4]:7.870039477544E0)[&rate=0.0012269380570410896]:2.403466051733E1)[&rate=0.0010399707859636035]:3.773638098455E1,(((30[&rate=6.889143603064513E-4]:4.85294611298E1,26[&rate=6.769819427416583E-4]:4.85294611298E1)[&rate=9.657786324838956E-4]:1.330671742644E1,32[&rate=5.922798003765621E-4]:6.183617855624E1)[&rate=5.009300681510649E-4]:6.420600598332E0,((((4[&rate=8.841372330175281E-4]:2.183838364729E0,3[&rate=9.657786324838956E-4]:2.183838364729E0)[&rate=3.3183424199632807E-4]:7.123110022071E-1,2[&rate=7.557058380117462E-4]:2.896149366936E0)[&rate=5.186176059053825E-4]:9.02282491867E0,5[&rate=2.1381373770048236E-4]:1.191897428561E1)[&rate=4.655862956022293E-4]:3.856908632053E0,((7[&rate=4.1990010290694844E-4]:9.020342065663E0,6[&rate=8.038617660029885E-4]:9.020342065663E0)[&rate=0.0010399707859636035]:1.695998487695E0,1[&rate=5.455115597175455E-4]:1.071634055336E1)[&rate=4.832965691191022E-4]:5.059542364301E0)[&rate=5.455115597175455E-4]:5.248089623692E1)[&rate=6.22211884442476E-4]:1.384301824847E0)[&rate=4.921143972752127E-4]:2.27218305459E0)[&rate=4.38539045385934E-4]:1.047982254726E0)[&rate=4.38539045385934E-4]:1.736224912153E0,((((33[&rate=0.0010399707859636035]:5.609063339454E1,13[&rate=3.688569615758371E-4]:5.609063339454E1)[&rate=5.455115597175455E-4]:1.311665239543E1,(11[&rate=6.889143603064513E-4]:1.817366890111E1,29[&rate=5.546308678558558E-4]:1.817366890111E1)[&rate=8.617524774238938E-4]:5.103361688886E1)[&rate=4.655862956022293E-4]:4.152204324052E-1,(19[&rate=7.557058380117462E-4]:2.166564776716E1,18[&rate=4.103018453597938E-4]:2.166564776716E1)[&rate=5.546308678558558E-4]:4.795685845522E1)[&rate=6.326133906992593E-4]:2.739949673658E0,((10[&rate=4.476486917999265E-4]:2.224811173548E1,31[&rate=7.012554791514533E-4]:2.224811173548E1)[&rate=2.8126759576665473E-4]:4.839924167043E1,23[&rate=4.655862956022293E-4]:7.064735340591E1)[&rate=5.097594125789705E-4]:1.715102490122E0)[&rate=4.29300076273655E-4]:2.335015304859E0)[&rate=5.275193833971887E-4]:6.495716735606E0,(17[&rate=9.657786324838956E-4]:7.373665788277E1,(27[&rate=5.097594125789705E-4]:3.168010685138E1,28[&rate=7.869263206765462E-4]:3.168010685138E1)[&rate=5.638518997048453E-4]:4.205655103139E1)[&rate=6.326133906992593E-4]:7.456530053726E0)[&rate=0.0016140119019947305]:4.778682365321E1); +tree STATE_570000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55135.366647744035,EEF_ucld_branchRates=-266.168517335019,lnP=-55135.366647744035,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.478911097603412E-4]:9.855325101416E0,9[&rate=3.642610821164346E-4]:9.855325101416E0)[&rate=1.6175371215474695E-4]:8.315635631645E0,15[&rate=4.1216449340581004E-4]:1.817096073306E1)[&rate=7.694035655201052E-4]:1.041312451429E2,(14[&rate=9.660659011024638E-4]:5.790748143972E1,24[&rate=6.930074170788266E-4]:5.790748143972E1)[&rate=8.478052411206571E-4]:6.439472443623E1)[&rate=0.0011027962275968004]:5.898574619171E0,(((25[&rate=7.480289076371462E-4]:7.412060652183E1,(12[&rate=6.475341223501684E-4]:7.224386409835E1,((16[&rate=3.9625236414774797E-4]:3.166381804443E1,((22[&rate=9.196246206156491E-4]:2.855579286783E0,21[&rate=3.5612533748472755E-4]:2.855579286783E0)[&rate=7.694035655201052E-4]:4.406935063046E0,20[&rate=5.326367136258695E-4]:7.262514349829E0)[&rate=0.0011027962275968004]:2.44013036946E1)[&rate=8.809654677102866E-4]:3.804159448334E1,(((((4[&rate=4.609570674791095E-4]:2.242034939494E0,3[&rate=5.84939079559011E-4]:2.242034939494E0)[&rate=4.042023709379725E-4]:6.137808759285E-1,2[&rate=2.621625324018625E-4]:2.855815815422E0)[&rate=5.326367136258695E-4]:8.35709271591E0,5[&rate=4.7793081648459836E-4]:1.121290853133E1)[&rate=6.769838987096496E-4]:3.205881676925E0,((7[&rate=2.8437087635954997E-4]:8.788733937428E0,6[&rate=4.526370661881297E-4]:8.788733937428E0)[&rate=3.5612533748472755E-4]:7.388100720618E-1,1[&rate=2.3536047382502115E-4]:9.527544009489E0)[&rate=5.738176689291912E-4]:4.891246198767E0)[&rate=3.8032851371430144E-4]:5.266286024692E1,((30[&rate=4.609570674791095E-4]:4.928721659867E1,26[&rate=6.475341223501684E-4]:4.928721659867E1)[&rate=4.7793081648459836E-4]:1.179592125673E1,32[&rate=5.738176689291912E-4]:6.10831378554E1)[&rate=3.723218762969301E-4]:5.998512599777E0)[&rate=4.6938360912205214E-4]:2.623762072589E0)[&rate=5.84939079559011E-4]:2.538451570585E0)[&rate=4.362623115223999E-4]:1.876742423483E0)[&rate=4.2015283330261324E-4]:1.381579183363E0,((((11[&rate=3.3953131257127264E-4]:2.068619714373E1,29[&rate=3.8032851371430144E-4]:2.068619714373E1)[&rate=5.964614181758415E-4]:4.571192484641E1,(33[&rate=8.187327483597052E-4]:5.597955514893E1,13[&rate=6.208893288530181E-4]:5.597955514893E1)[&rate=5.84939079559011E-4]:1.04185668412E1)[&rate=2.736669350120155E-4]:2.860590072781E0,(19[&rate=3.478911097603412E-4]:1.690920731217E1,18[&rate=5.230229372947553E-4]:1.690920731217E1)[&rate=4.2015283330261324E-4]:5.234950475074E1)[&rate=8.478052411206571E-4]:2.722093665951E0,((10[&rate=2.8437087635954997E-4]:2.410452144772E1,31[&rate=7.283407027614363E-4]:2.410452144772E1)[&rate=4.444099344868048E-4]:4.641056532905E1,23[&rate=4.362623115223999E-4]:7.051508677677E1)[&rate=2.186180124365165E-4]:1.46571895209E0)[&rate=4.1216449340581004E-4]:3.521379976334E0)[&rate=3.642610821164346E-4]:5.199962473571E0,(17[&rate=7.928150912944797E-4]:7.152221203929E1,(27[&rate=3.310142059693028E-4]:3.451294188468E1,28[&rate=0.0010243483771150965]:3.451294188468E1)[&rate=4.444099344868048E-4]:3.700927015461E1)[&rate=6.475341223501684E-4]:9.179936139476E0)[&rate=0.0014904827604145042]:4.749863231635E1); +tree STATE_580000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55169.289656861656,EEF_ucld_branchRates=-266.168517335019,lnP=-55169.289656861656,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.8961543131714064E-4]:1.282306621762E1,9[&rate=9.245478813904866E-4]:1.282306621762E1)[&rate=0.0010394522628233826]:5.31298886273E0,15[&rate=4.182872594149562E-4]:1.813605508035E1)[&rate=6.455493134839455E-4]:1.007853681625E2,(14[&rate=9.581910990938784E-4]:5.063895385623E1,24[&rate=7.565074434320698E-4]:5.063895385623E1)[&rate=9.960704975906316E-4]:6.828246938658E1)[&rate=5.823754125576093E-4]:9.043537058974E0,(((25[&rate=6.455493134839455E-4]:7.319077747117E1,((16[&rate=4.469477722747732E-4]:3.086004495715E1,((22[&rate=5.061116378058913E-4]:2.667510803497E0,21[&rate=2.83559894387853E-4]:2.667510803497E0)[&rate=2.95909751950659E-4]:4.956609529789E0,20[&rate=4.469477722747732E-4]:7.624120333286E0)[&rate=0.0013340737882894234]:2.323592462386E1)[&rate=0.001229053857705501]:4.017167200578E1,(12[&rate=7.961626326534668E-4]:7.077072674417E1,(((((4[&rate=3.992071200185751E-4]:2.029299030717E0,3[&rate=6.739159469208513E-4]:2.029299030717E0)[&rate=3.992071200185751E-4]:5.690540003324E-1,2[&rate=1.5808799797170992E-4]:2.598353031049E0)[&rate=5.164021599534896E-4]:6.751224543646E0,5[&rate=7.383309542517646E-4]:9.349577574695E0)[&rate=2.20937534681154E-4]:2.237663855551E0,((7[&rate=3.4007900399831526E-4]:8.385570384316E0,1[&rate=2.398161577863408E-4]:8.385570384316E0)[&rate=0.0011516030654094526]:1.716928441494E0,6[&rate=4.959717119349778E-4]:1.010249882581E1)[&rate=7.04652047685281E-4]:1.484742604436E0)[&rate=4.959717119349778E-4]:5.88307628311E1,((30[&rate=9.245478813904866E-4]:4.62906291909E1,26[&rate=6.455493134839455E-4]:4.62906291909E1)[&rate=9.960704975906316E-4]:1.135573733843E1,32[&rate=5.268610324684007E-4]:5.764636652933E1)[&rate=3.799584489654808E-4]:1.277163773202E1)[&rate=0.0018644487731456923]:3.52722482828E-1)[&rate=3.603380944042894E-4]:2.609902187583E-1)[&rate=6.889558849280146E-4]:2.15906050824E0)[&rate=5.94281824496585E-4]:8.664707110471E-1,((((11[&rate=3.603380944042894E-4]:2.59358912043E1,29[&rate=3.992071200185751E-4]:2.59358912043E1)[&rate=6.594662556819046E-4]:3.996968090421E1,(33[&rate=5.268610324684007E-4]:5.469346130962E1,13[&rate=3.799584489654808E-4]:5.469346130962E1)[&rate=4.959717119349778E-4]:1.121211079889E1)[&rate=4.565832039642366E-4]:6.270673429973E-1,(19[&rate=8.667014734872413E-4]:1.618364786538E1,18[&rate=4.469477722747732E-4]:1.618364786538E1)[&rate=2.83559894387853E-4]:5.034899158613E1)[&rate=3.603380944042894E-4]:4.238365614207E0,((10[&rate=6.739159469208513E-4]:2.213600859587E1,31[&rate=7.383309542517646E-4]:2.213600859587E1)[&rate=4.278169042684203E-4]:4.818223230315E1,23[&rate=4.565832039642366E-4]:7.031824089902E1)[&rate=2.95909751950659E-4]:4.527641667014E-1)[&rate=4.76075890845241E-4]:3.286243116501E0)[&rate=5.061116378058913E-4]:4.643540046922E0,(17[&rate=8.413921628114295E-4]:7.014695938176E1,(27[&rate=5.707702188812689E-4]:3.329825673217E1,28[&rate=8.942626161134217E-4]:3.329825673217E1)[&rate=0.0010902571907514837]:3.684870264959E1)[&rate=4.76075890845241E-4]:8.553828847379E0)[&rate=0.0013340737882894234]:4.926417207265E1); +tree STATE_590000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55155.96573671741,EEF_ucld_branchRates=-266.168517335019,lnP=-55155.96573671741,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.4527429507756754E-4]:1.139499282749E1,9[&rate=6.224010699736582E-4]:1.139499282749E1)[&rate=4.7539842850628317E-4]:8.389126366746E0,15[&rate=4.5135119621584924E-4]:1.978411919424E1)[&rate=0.0011140578222603827]:9.713250415434E1,(14[&rate=0.0012189012223916594]:5.006571326729E1,24[&rate=7.221189629134619E-4]:5.006571326729E1)[&rate=0.001163173120269999]:6.685091008129E1)[&rate=2.3639526824492533E-4]:1.113386217534E1,(((25[&rate=8.491914294836488E-4]:7.131736817974E1,(12[&rate=7.605922462194461E-4]:6.99315027795E1,((((((4[&rate=2.5254273898511076E-4]:2.517058752778E0,2[&rate=1.722422872270133E-4]:2.517058752778E0)[&rate=5.515643155597016E-4]:3.877189391211E-1,3[&rate=7.811280633002363E-4]:2.904777691899E0)[&rate=7.221189629134619E-4]:6.790406426654E0,5[&rate=3.331411534683479E-4]:9.695184118553E0)[&rate=4.7539842850628317E-4]:2.964827967777E0,((7[&rate=2.9513596401192625E-4]:8.392064211087E0,1[&rate=5.383249453283486E-4]:8.392064211087E0)[&rate=0.0012189012223916594]:6.979260357699E-1,6[&rate=6.865834524506589E-4]:9.089990246857E0)[&rate=5.515643155597016E-4]:3.570021839473E0)[&rate=3.925653153128451E-4]:5.476979377709E1,((30[&rate=7.221189629134619E-4]:4.867572279776E1,26[&rate=3.925653153128451E-4]:4.867572279776E1)[&rate=9.301161474425664E-4]:1.355310096071E1,32[&rate=4.8762096941850513E-4]:6.222882375847E1)[&rate=3.925653153128451E-4]:5.200982104952E0)[&rate=0.002597759902976142]:1.11691919109E0,(16[&rate=2.816423626928966E-4]:2.849541117807E1,((22[&rate=0.0014522042793511621]:3.737482191722E0,21[&rate=0.0014522042793511621]:3.737482191722E0)[&rate=8.026590893763382E-4]:4.254964548982E0,20[&rate=3.925653153128451E-4]:7.992446740704E0)[&rate=0.0017343237256907936]:2.050296443737E1)[&rate=7.409515192381634E-4]:4.005131387644E1)[&rate=0.0015709001462284324]:1.384777724987E0)[&rate=3.4527429507756754E-4]:1.385865400243E0)[&rate=6.534783551950476E-4]:6.103761746914E-1,((((11[&rate=2.9513596401192625E-4]:2.340482505403E1,29[&rate=3.4527429507756754E-4]:2.340482505403E1)[&rate=8.744894334082139E-4]:4.228348411877E1,(33[&rate=5.650763642087299E-4]:5.92657438606E1,13[&rate=4.8762096941850513E-4]:5.92657438606E1)[&rate=4.7539842850628317E-4]:6.422565312199E0)[&rate=0.001070159803974363]:1.693119269154E0,(19[&rate=8.491914294836488E-4]:1.269378954735E1,18[&rate=0.0012189012223916594]:1.269378954735E1)[&rate=4.394851962087263E-4]:5.46876388946E1)[&rate=4.0426010937532296E-4]:2.794873674075E0,((10[&rate=5.253337274823459E-4]:1.678029783645E1,31[&rate=4.633153603850051E-4]:1.678029783645E1)[&rate=4.276961722695802E-4]:5.304958770989E1,23[&rate=4.0426010937532296E-4]:6.982988554634E1)[&rate=0.001070159803974363]:3.464165696827E-1)[&rate=5.253337274823459E-4]:1.751442238409E0)[&rate=1.722422872270133E-4]:5.054199298487E0,(17[&rate=0.001070159803974363]:6.539063960308E1,(27[&rate=5.383249453283486E-4]:3.245958242735E1,28[&rate=0.0010304767711511915]:3.245958242735E1)[&rate=7.605922462194461E-4]:3.293105717573E1)[&rate=5.788871268762002E-4]:1.159130404983E1)[&rate=0.0017343237256907936]:5.1068541871E1); +tree STATE_600000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55148.025053325895,EEF_ucld_branchRates=-266.168517335019,lnP=-55148.025053325895,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.252561604677114E-4]:9.105492286804E0,9[&rate=0.0012513467873844647]:9.105492286804E0)[&rate=8.526671747214242E-4]:7.211824672027E0,15[&rate=7.92490750923537E-4]:1.631731695883E1)[&rate=6.379814080920265E-4]:1.002285610906E2,(14[&rate=0.0011110803729940295]:5.125302562708E1,24[&rate=6.274888806055935E-4]:5.125302562708E1)[&rate=8.21413279316149E-4]:6.52928524223E1)[&rate=0.0018570935421146672]:1.295861859403E1,(((25[&rate=0.0010171321646475046]:7.063856386855E1,(12[&rate=7.787607174877523E-4]:6.918771986101E1,((((((4[&rate=5.45739595675468E-4]:2.063495197887E0,2[&rate=2.943375908919395E-4]:2.063495197887E0)[&rate=6.379814080920265E-4]:1.129264419461E0,3[&rate=6.702318828309839E-4]:3.192759617348E0)[&rate=0.0010171321646475046]:7.849283641675E0,5[&rate=3.816506509996253E-4]:1.104204325902E1)[&rate=6.379814080920265E-4]:1.760577239727E0,((7[&rate=3.649100919084482E-4]:7.934250896611E0,6[&rate=0.0013198980088254591]:7.934250896611E0)[&rate=0.0010171321646475046]:5.523644618441E-1,1[&rate=5.761948270836841E-4]:8.486615358455E0)[&rate=8.367160360219629E-4]:4.316005140295E0)[&rate=6.274888806055935E-4]:5.329724388748E1,((30[&rate=8.693454842818094E-4]:4.926227676215E1,26[&rate=7.157404046607254E-4]:4.926227676215E1)[&rate=7.787607174877523E-4]:8.869695342552E0,32[&rate=4.719247259270646E-4]:5.813197210471E1)[&rate=5.252561604677114E-4]:7.967892281523E0)[&rate=4.3685186471002595E-4]:2.334650435579E0,(16[&rate=2.943375908919395E-4]:2.772617174909E1,((22[&rate=0.0010452721118562882]:3.376505896572E0,21[&rate=5.66051935269338E-4]:3.376505896572E0)[&rate=4.1097753348241366E-4]:2.575638121346E0,20[&rate=5.863534985006327E-4]:5.952144017918E0)[&rate=0.0014116209485293392]:2.177402773117E1)[&rate=8.693454842818094E-4]:4.070834307272E1)[&rate=0.0011964582531113113]:7.532050391985E-1)[&rate=5.965454091502141E-4]:1.450844007546E0)[&rate=7.157404046607254E-4]:1.565339583713E0,((((33[&rate=7.525353796351676E-4]:5.605240753305E1,13[&rate=5.559066096106502E-4]:5.605240753305E1)[&rate=5.148925617517198E-4]:1.041610395821E1,(11[&rate=5.148925617517198E-4]:1.55805909733E1,29[&rate=5.148925617517198E-4]:1.55805909733E1)[&rate=5.559066096106502E-4]:5.088792051796E1)[&rate=8.367160360219629E-4]:1.481463332444E0,(19[&rate=6.48591023756532E-4]:1.812086178623E1,18[&rate=0.0010763377649697006]:1.812086178623E1)[&rate=5.761948270836841E-4]:4.982911303747E1)[&rate=6.593351562629257E-4]:2.044503493173E0,((10[&rate=8.066911227439471E-4]:1.772301597605E1,31[&rate=9.24758038308952E-4]:1.772301597605E1)[&rate=4.719247259270646E-4]:5.1282961527E1,23[&rate=4.606024704276793E-4]:6.900597750305E1)[&rate=4.719247259270646E-4]:9.885008138197E-1)[&rate=5.044117522000342E-4]:2.209425135393E0)[&rate=9.913734738978201E-4]:3.521260744084E0,(17[&rate=0.0010171321646475046]:5.854967406272E1,(27[&rate=5.965454091502141E-4]:2.593711765682E1,28[&rate=0.0011110803729940295]:2.593711765682E1)[&rate=7.92490750923537E-4]:3.26125564059E1)[&rate=4.2424328687069786E-4]:1.717549013363E1)[&rate=0.0013198980088254591]:5.377933244706E1); +tree STATE_610000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55143.56266597992,EEF_ucld_branchRates=-266.168517335019,lnP=-55143.56266597992,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.92826312958095E-4]:1.081409694648E1,9[&rate=3.9590099384968877E-4]:1.081409694648E1)[&rate=7.677171296929206E-4]:6.363876116404E0,15[&rate=4.93990432806394E-4]:1.717797306288E1)[&rate=5.661602017339896E-4]:1.032314989537E2,(14[&rate=8.953426382597767E-4]:4.916874547016E1,24[&rate=7.677171296929206E-4]:4.916874547016E1)[&rate=9.226395450953851E-4]:7.124072654645E1)[&rate=0.0018670014011812205]:9.210147831603E0,(((25[&rate=7.033438864993871E-4]:7.437652101306E1,(12[&rate=7.505013442903295E-4]:7.297713445874E1,((((30[&rate=6.357210026560328E-4]:5.179170261805E1,26[&rate=4.93990432806394E-4]:5.179170261805E1)[&rate=0.0011158271334833698]:8.198564114579E0,32[&rate=4.256040835342958E-4]:5.999026673263E1)[&rate=2.1603313244788024E-4]:8.029910486121E0,((((4[&rate=2.1603313244788024E-4]:2.351373308904E0,2[&rate=4.6455731210343044E-4]:2.351373308904E0)[&rate=5.343973416873613E-4]:2.166079627539E0,3[&rate=5.241217911849296E-4]:4.517452936443E0)[&rate=6.357210026560328E-4]:7.543450549471E0,5[&rate=4.157890743700991E-4]:1.206090348591E1)[&rate=3.314416296937542E-4]:1.628943777344E0,((7[&rate=4.0589732049713464E-4]:8.386337084943E0,6[&rate=8.469945474455298E-4]:8.386337084943E0)[&rate=3.430036054881071E-4]:8.241171602794E-1,1[&rate=4.256040835342958E-4]:9.210454245222E0)[&rate=4.743181596953487E-4]:4.479393018035E0)[&rate=4.6455731210343044E-4]:5.433032995549E1)[&rate=5.448169492247349E-4]:1.262398214411E0,(16[&rate=4.5482396167089556E-4]:3.017287096754E1,((22[&rate=4.157890743700991E-4]:3.444031476786E0,21[&rate=9.858253041370826E-4]:3.444031476786E0)[&rate=4.8412365339635047E-4]:2.693455680162E0,20[&rate=0.0011759915896498781]:6.137487156948E0)[&rate=0.0018670014011812205]:2.403538381059E1)[&rate=7.033438864993871E-4]:3.910970446562E1)[&rate=0.0010231830552130795]:3.694559025581E0)[&rate=9.525950752953957E-4]:1.399386554321E0)[&rate=3.754616060835366E-4]:8.416227866494E-1,((((19[&rate=7.183956276097932E-4]:1.566919413395E1,18[&rate=7.505013442903295E-4]:1.566919413395E1)[&rate=2.6102612308969244E-4]:5.129460174857E1,(11[&rate=5.343973416873613E-4]:1.218381794821E1,29[&rate=6.614369908750717E-4]:1.218381794821E1)[&rate=5.771220661498493E-4]:5.477997793431E1)[&rate=4.743181596953487E-4]:9.324423640283E-1,(33[&rate=9.525950752953957E-4]:5.470285142967E1,13[&rate=4.5482396167089556E-4]:5.470285142967E1)[&rate=3.541399749592956E-4]:1.319338681687E1)[&rate=5.343973416873613E-4]:4.903789231516E0,((10[&rate=6.888699888834126E-4]:2.076039145153E1,31[&rate=6.114243464700662E-4]:2.076039145153E1)[&rate=4.157890743700991E-4]:5.110699791217E1,23[&rate=5.241217911849296E-4]:7.18673893637E1)[&rate=0.0011158271334833698]:9.326381143586E-1)[&rate=3.754616060835366E-4]:2.418116321653E0)[&rate=8.953426382597767E-4]:4.098509581223E0,(17[&rate=8.953426382597767E-4]:6.801139035141E1,(27[&rate=3.065433746060866E-4]:3.011856302229E1,28[&rate=0.0011759915896498781]:3.011856302229E1)[&rate=6.749175403934079E-4]:3.789282732912E1)[&rate=6.888699888834126E-4]:1.130526302952E1)[&rate=9.858253041370826E-4]:5.030296646727E1); +tree STATE_620000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55145.98986099624,EEF_ucld_branchRates=-266.168517335019,lnP=-55145.98986099624,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.772531354841788E-4]:8.754788552752E0,9[&rate=4.670572242018581E-4]:8.754788552752E0)[&rate=4.835505461163034E-4]:8.381643017706E0,15[&rate=5.775805382379157E-4]:1.713643157046E1)[&rate=8.910599905816067E-4]:1.001592210717E2,(14[&rate=7.464731104412755E-4]:5.238290739628E1,24[&rate=0.001009592683153325]:5.238290739628E1)[&rate=9.148381362090295E-4]:6.49127452459E1)[&rate=6.531316703144088E-4]:1.227527349039E1,(((25[&rate=7.345816890368084E-4]:7.465371553311E1,(12[&rate=9.727418567070095E-4]:7.251963493453E1,((16[&rate=4.5856127303991323E-4]:2.876298991607E1,((22[&rate=7.464731104412755E-4]:3.540115691475E0,21[&rate=6.717298306929284E-4]:3.540115691475E0)[&rate=6.099070466317411E-4]:3.25951782161E0,20[&rate=0.0014004881160733758]:6.799633513085E0)[&rate=0.0014004881160733758]:2.196335640298E1)[&rate=9.148381362090295E-4]:4.187016266706E1,(((((4[&rate=4.31610975582677E-4]:3.496456680061E0,2[&rate=8.323444644391923E-4]:3.496456680061E0)[&rate=7.231714630174019E-4]:1.783971870552E-1,3[&rate=6.91338539166491E-4]:3.674853867116E0)[&rate=6.813946063925839E-4]:8.492464201494E0,5[&rate=5.230530378702241E-4]:1.216731806861E1)[&rate=5.385571180291854E-4]:2.443164991969E0,((7[&rate=4.835505461163034E-4]:9.248258719485E0,6[&rate=5.230530378702241E-4]:9.248258719485E0)[&rate=6.016817111493315E-4]:1.565840852277E0,1[&rate=5.775805382379157E-4]:1.081409957176E1)[&rate=5.775805382379157E-4]:3.796383488818E0)[&rate=6.441517582742793E-4]:5.499315419504E1,((30[&rate=5.696948129778536E-4]:5.357453249933E1,26[&rate=7.345816890368084E-4]:5.357453249933E1)[&rate=4.670572242018581E-4]:1.123931729032E1,32[&rate=3.477626364913423E-4]:6.481384978965E1)[&rate=3.0416370925180424E-4]:4.789787465972E0)[&rate=8.910599905816067E-4]:1.029515327509E0)[&rate=6.441517582742793E-4]:1.886482351397E0)[&rate=5.230530378702241E-4]:2.134080598586E0)[&rate=5.775805382379157E-4]:4.28393029181E-1,((((33[&rate=8.696870470186756E-4]:5.402534389898E1,13[&rate=4.835505461163034E-4]:5.402534389898E1)[&rate=4.5856127303991323E-4]:1.141364263828E1,(11[&rate=5.463058192322207E-4]:1.335223283881E1,29[&rate=9.727418567070095E-4]:1.335223283881E1)[&rate=7.015921692256204E-4]:5.208675369845E1)[&rate=8.696870470186756E-4]:2.298436961206E0,(19[&rate=4.2195628498482266E-4]:1.765225196198E1,18[&rate=5.152696631948183E-4]:1.765225196198E1)[&rate=5.463058192322207E-4]:5.008517153649E1)[&rate=2.620300102854957E-4]:5.689176650212E0,((10[&rate=8.002636442163751E-4]:2.252234613025E1,31[&rate=5.696948129778536E-4]:2.252234613025E1)[&rate=4.835505461163034E-4]:4.945955339188E1,23[&rate=4.835505461163034E-4]:7.198189952212E1)[&rate=6.813946063925839E-4]:1.444700626554E0)[&rate=4.011309770929499E-4]:1.655508413616E0)[&rate=5.152696631948183E-4]:3.750762512371E0,(17[&rate=8.323444644391923E-4]:7.136060793704E1,(27[&rate=3.896817702732205E-4]:3.217678716365E1,28[&rate=7.121900272259449E-4]:3.217678716365E1)[&rate=5.308107311677672E-4]:3.918382077339E1)[&rate=8.502330483232265E-4]:7.472263137619E0)[&rate=0.001009592683153325]:5.07380550579E1); +tree STATE_630000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55128.22977084982,EEF_ucld_branchRates=-266.168517335019,lnP=-55128.22977084982,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.665573739578744E-4]:1.026341004866E1,9[&rate=0.0010280129006419935]:1.026341004866E1)[&rate=3.1725646619593664E-4]:9.392624440948E0,15[&rate=4.6242253713915036E-4]:1.96560344896E1)[&rate=6.73291636828245E-4]:9.745158557874E1,(14[&rate=0.0010726453586898303]:5.397147671925E1,24[&rate=6.843753552346068E-4]:5.397147671925E1)[&rate=0.0010280129006419935]:6.313614334909E1)[&rate=4.7123684534488246E-4]:1.289015265958E1,(((25[&rate=5.402755567036285E-4]:7.448122340446E1,(12[&rate=9.299541147545797E-4]:7.284081802928E1,(((16[&rate=4.6242253713915036E-4]:3.038018485645E1,((22[&rate=8.224585374932151E-4]:3.781367060871E0,21[&rate=6.029436748120459E-4]:3.781367060871E0)[&rate=6.417908747848644E-4]:3.964395339553E0,20[&rate=4.4443901082761705E-4]:7.745762400424E0)[&rate=0.0015592375307999949]:2.263442245603E1)[&rate=7.32541185963187E-4]:3.875793806567E1,((30[&rate=5.845094991035025E-4]:5.084538711837E1,26[&rate=5.577247925206013E-4]:5.084538711837E1)[&rate=7.32541185963187E-4]:1.087629609323E1,32[&rate=2.2956263905304716E-4]:6.17216832116E1)[&rate=6.317854094466663E-4]:7.416439710526E0)[&rate=5.665573739578744E-4]:1.700710914886E0,((((4[&rate=7.595812721711891E-4]:2.224035276614E0,2[&rate=5.577247925206013E-4]:2.224035276614E0)[&rate=0.0015592375307999949]:7.289287903098E-1,3[&rate=6.958026990553053E-4]:2.952964066923E0)[&rate=9.045028823194434E-4]:9.013417115369E0,5[&rate=5.144312934787178E-4]:1.196638118229E1)[&rate=5.665573739578744E-4]:3.184660448679E0,((7[&rate=4.061003665697368E-4]:9.412200989238E0,6[&rate=8.602501806967912E-4]:9.412200989238E0)[&rate=5.058469948395923E-4]:1.245646915009E0,1[&rate=4.3521061082542003E-4]:1.065784790425E1)[&rate=4.3521061082542003E-4]:4.493193726724E0)[&rate=4.972525550017419E-4]:5.568779220604E1)[&rate=5.058469948395923E-4]:2.00198419227E0)[&rate=7.198408110336401E-4]:1.640405375182E0)[&rate=6.520273109638935E-4]:1.442388752066E0,((((33[&rate=7.457667097813703E-4]:5.726723838262E1,13[&rate=4.4443901082761705E-4]:5.726723838262E1)[&rate=3.613308019763696E-4]:1.388113796793E1,(11[&rate=3.734902675312092E-4]:1.423704570151E1,29[&rate=7.198408110336401E-4]:1.423704570151E1)[&rate=9.045028823194434E-4]:5.691133064903E1)[&rate=2.7221794075608273E-4]:7.854409028787E-1,(19[&rate=4.7123684534488246E-4]:1.707854549924E1,18[&rate=5.144312934787178E-4]:1.707854549924E1)[&rate=4.972525550017419E-4]:5.485527175418E1)[&rate=5.577247925206013E-4]:2.185812613132E0,((10[&rate=5.144312934787178E-4]:2.076823058573E1,31[&rate=9.045028823194434E-4]:2.076823058573E1)[&rate=4.6242253713915036E-4]:5.211660193403E1,23[&rate=3.4818890138194633E-4]:7.288483251976E1)[&rate=9.045028823194434E-4]:1.234797346792E0)[&rate=8.602501806967912E-4]:1.80398228997E0)[&rate=9.299541147545797E-4]:4.540258174445E0,(17[&rate=6.73291636828245E-4]:7.183708569642E1,(27[&rate=5.31630964803316E-4]:3.557288177598E1,28[&rate=9.299541147545797E-4]:3.557288177598E1)[&rate=7.740597694382984E-4]:3.626420392044E1)[&rate=3.849035955666123E-4]:8.626784634547E0)[&rate=0.0010726453586898303]:4.953390239696E1); +tree STATE_640000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55125.52439721586,EEF_ucld_branchRates=-266.168517335019,lnP=-55125.52439721586,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.7431374097376713E-4]:9.143170943603E0,9[&rate=9.077954472193951E-4]:9.143170943603E0)[&rate=4.5498959037579533E-4]:7.430138869168E0,15[&rate=8.161403134002425E-4]:1.657330981277E1)[&rate=0.0010415668547006885]:9.241303075708E1,(14[&rate=0.0017356208513708254]:4.344960721005E1,24[&rate=0.0011211117316395488]:4.344960721005E1)[&rate=0.001009187646930125]:6.55367333598E1)[&rate=4.945826978390308E-4]:1.445662062302E1,(((25[&rate=7.714005629904412E-4]:7.12550777749E1,(12[&rate=7.443969548779341E-4]:6.87745114636E1,((((30[&rate=6.83891413861116E-4]:5.088423345109E1,26[&rate=5.902236376060961E-4]:5.088423345109E1)[&rate=7.191503036201002E-4]:7.156662130316E0,32[&rate=5.612858341083541E-4]:5.80408955814E1)[&rate=3.443420289371486E-4]:9.013739526301E0,((((4[&rate=4.750694058842455E-4]:2.211549854431E0,2[&rate=5.232675439746676E-4]:2.211549854431E0)[&rate=5.04198996235163E-4]:1.023867703018E0,3[&rate=7.856857395394457E-4]:3.235417557449E0)[&rate=4.945826978390308E-4]:6.62809682164E0,5[&rate=5.327601649693369E-4]:9.863514379089E0)[&rate=8.324691260732271E-4]:2.261314411588E0,((7[&rate=5.422495019245131E-4]:7.796545146998E0,6[&rate=5.232675439746676E-4]:7.796545146998E0)[&rate=2.7810092155536266E-4]:8.089113329362E-1,1[&rate=5.708650353324601E-4]:8.605456479934E0)[&rate=5.708650353324601E-4]:3.519372310742E0)[&rate=4.6511683986574743E-4]:5.492980631703E1)[&rate=6.953399537750601E-4]:4.032382263064E-1,(16[&rate=4.5498959037579533E-4]:2.718970554384E1,((22[&rate=8.005745370988768E-4]:2.943123191659E0,21[&rate=6.83891413861116E-4]:2.943123191659E0)[&rate=9.29976637797089E-4]:4.512613601314E0,20[&rate=3.9997405759429814E-4]:7.455736792972E0)[&rate=0.0017356208513708254]:1.973396875087E1)[&rate=5.422495019245131E-4]:4.026816779017E1)[&rate=9.80230030884195E-4]:1.31663812959E0)[&rate=2.3256742836309826E-4]:2.480566311303E0)[&rate=6.199969092937593E-4]:1.46990167742E0,((((33[&rate=7.856857395394457E-4]:5.79046451352E1,13[&rate=6.510498229361851E-4]:5.79046451352E1)[&rate=7.070828532730283E-4]:7.562911530375E0,(11[&rate=0.0011211117316395488]:1.198267213858E1,29[&rate=6.000341301203619E-4]:1.198267213858E1)[&rate=5.80505802701599E-4]:5.348488452699E1)[&rate=2.7810092155536266E-4]:8.201712729785E-1,(19[&rate=9.80230030884195E-4]:1.631170234195E1,18[&rate=8.324691260732271E-4]:1.631170234195E1)[&rate=3.9997405759429814E-4]:4.99760255966E1)[&rate=4.340419550461394E-4]:3.555003785808E0,((10[&rate=0.001009187646930125]:1.697520171007E1,31[&rate=7.856857395394457E-4]:1.697520171007E1)[&rate=5.422495019245131E-4]:5.247849551922E1,23[&rate=5.902236376060961E-4]:6.94536972293E1)[&rate=5.902236376060961E-4]:3.890344950611E-1)[&rate=4.4464739193512455E-4]:2.882247727966E0)[&rate=0.0011722323855225948]:4.046771245813E0,(17[&rate=9.80230030884195E-4]:6.721653596457E1,(27[&rate=5.902236376060961E-4]:2.863537620662E1,28[&rate=9.80230030884195E-4]:2.863537620662E1)[&rate=7.315758371836021E-4]:3.858115975794E1)[&rate=4.848814993544608E-4]:9.555214733573E0)[&rate=0.0011722323855225948]:4.667121049474E1); +tree STATE_650000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55133.20772520713,EEF_ucld_branchRates=-266.168517335019,lnP=-55133.20772520713,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.31907037443765E-4]:9.310188108681E0,9[&rate=7.464940724621812E-4]:9.310188108681E0)[&rate=6.994068852668753E-4]:7.054794697681E0,15[&rate=4.709206598079352E-4]:1.636498280636E1)[&rate=9.184712638816922E-4]:9.561776760803E1,(14[&rate=0.0013501567192565152]:4.883320968868E1,24[&rate=8.91190645310154E-4]:4.883320968868E1)[&rate=9.484126310266342E-4]:6.314954072571E1)[&rate=3.8268859898976426E-4]:1.216477110584E1,(((25[&rate=6.196229223511821E-4]:7.240736938558E1,(12[&rate=7.817875317252599E-4]:7.167898416982E1,((((((4[&rate=3.8268859898976426E-4]:2.575161433195E0,2[&rate=4.709206598079352E-4]:2.575161433195E0)[&rate=7.817875317252599E-4]:7.543932883597E-1,3[&rate=0.0010189819260487665]:3.329554721555E0)[&rate=9.816315495645126E-4]:6.882735792676E0,5[&rate=3.8268859898976426E-4]:1.021229051423E1)[&rate=4.0273895556160546E-4]:2.392680297539E0,((7[&rate=2.1381223334186923E-4]:7.647270471261E0,6[&rate=5.205753598747845E-4]:7.647270471261E0)[&rate=3.511927247744368E-4]:1.006548837972E0,1[&rate=7.301056742377716E-4]:8.653819309234E0)[&rate=4.223724434056592E-4]:3.951151502536E0)[&rate=5.104555048072838E-4]:5.576858824116E1,((30[&rate=6.575730101139713E-4]:5.409356468835E1,26[&rate=3.9278124390482085E-4]:5.409356468835E1)[&rate=9.816315495645126E-4]:8.211210531924E0,32[&rate=4.514903201283676E-4]:6.230477522027E1)[&rate=5.517681846571264E-4]:6.068783832654E0)[&rate=6.994068852668753E-4]:9.034628969411E-1,(16[&rate=4.321004515490962E-4]:3.155329937168E1,((22[&rate=8.428796327905754E-4]:3.979855227707E0,21[&rate=3.401055777172308E-4]:3.979855227707E0)[&rate=4.6119137884459297E-4]:5.499897196664E0,20[&rate=5.104555048072838E-4]:9.479752424371E0)[&rate=0.001863812629118922]:2.207354694731E1)[&rate=5.104555048072838E-4]:3.772372257819E1)[&rate=7.63687193200328E-4]:2.401962219955E0)[&rate=4.223724434056592E-4]:7.283852157548E-1)[&rate=5.004464060314878E-4]:1.858408287174E0,((((33[&rate=5.959939182136668E-4]:6.06359176926E1,13[&rate=4.6119137884459297E-4]:6.06359176926E1)[&rate=5.412142908377678E-4]:7.515757969734E0,(11[&rate=5.205753598747845E-4]:1.256211394206E1,29[&rate=0.0011116308492828818]:1.256211394206E1)[&rate=8.91190645310154E-4]:5.558956172028E1)[&rate=0.001247631593556775]:9.810720030645E-1,(19[&rate=7.144348647340257E-4]:1.625139166194E1,18[&rate=5.205753598747845E-4]:1.625139166194E1)[&rate=4.6119137884459297E-4]:5.288135600346E1)[&rate=3.038168330976906E-4]:3.482609991816E0,((10[&rate=5.959939182136668E-4]:2.149554227376E1,31[&rate=6.445453936766546E-4]:2.149554227376E1)[&rate=3.8268859898976426E-4]:4.966149569272E1,23[&rate=4.905317292960758E-4]:7.115703796648E1)[&rate=2.3890591454246504E-4]:1.458319690742E0)[&rate=2.1381223334186923E-4]:1.650420015532E0)[&rate=2.7526563259061917E-4]:5.384408028482E0,(17[&rate=9.816315495645126E-4]:6.791971103695E1,(27[&rate=3.038168330976906E-4]:2.851980240215E1,28[&rate=0.0011116308492828818]:2.851980240215E1)[&rate=6.710289453989743E-4]:3.93999086348E1)[&rate=7.301056742377716E-4]:1.173047466428E1)[&rate=0.001863812629118922]:4.449733581901E1); +tree STATE_660000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.68739655675,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.68739655675,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.988538607391491E-4]:7.024342214358E0,9[&rate=7.009153157805899E-4]:7.024342214358E0)[&rate=4.5181624429853497E-4]:9.003140327165E0,15[&rate=3.449283064352021E-4]:1.602748254152E1)[&rate=0.0010072544430760229]:8.934508403545E1,(14[&rate=0.0010072544430760229]:4.90805368232E1,24[&rate=8.552635809385728E-4]:4.90805368232E1)[&rate=0.0012305637737759314]:5.629202975377E1)[&rate=3.073692923491352E-4]:2.185315880303E1,(((25[&rate=4.798860718454131E-4]:7.458189854885E1,((((33[&rate=9.606760653748602E-4]:6.152143560712E1,13[&rate=4.895285488224682E-4]:6.152143560712E1)[&rate=5.629210400979638E-4]:5.5557145816E0,(11[&rate=4.610459390566932E-4]:1.178150665505E1,29[&rate=6.249582452968421E-4]:1.178150665505E1)[&rate=7.789137316720762E-4]:5.529564353366E1)[&rate=4.426929798840149E-4]:1.306395590377E0,(19[&rate=3.3580202137335123E-4]:2.075924248776E1,18[&rate=1.84357192240398E-4]:2.075924248776E1)[&rate=3.539395002784733E-4]:4.762430329133E1)[&rate=3.449283064352021E-4]:3.87376104916E0,((10[&rate=5.516519041335968E-4]:2.186467115639E1,31[&rate=6.683427639437174E-4]:2.186467115639E1)[&rate=2.9737834726292864E-4]:4.95639444325E1,23[&rate=4.1581275596121485E-4]:7.142861558889E1)[&rate=4.0696618068121064E-4]:8.286912393702E-1)[&rate=3.805485506761696E-4]:2.324591720596E0)[&rate=6.532334346726354E-4]:7.719092182847E-1,(((((4[&rate=6.249582452968421E-4]:1.431525703305E0,2[&rate=5.629210400979638E-4]:1.431525703305E0)[&rate=2.647477951628196E-4]:9.379742611193E-1,3[&rate=4.0696618068121064E-4]:2.369499964424E0)[&rate=4.5181624429853497E-4]:8.084943452988E0,5[&rate=4.610459390566932E-4]:1.045444341741E1)[&rate=5.299942738400984E-4]:1.698044158194E0,((7[&rate=6.532334346726354E-4]:7.585484321459E0,6[&rate=5.864875008245588E-4]:7.585484321459E0)[&rate=2.0668320943112553E-4]:9.736185952605E-1,1[&rate=3.893506619132969E-4]:8.559102916719E0)[&rate=5.299942738400984E-4]:3.593384658888E0)[&rate=4.1581275596121485E-4]:6.022059286566E1,((((30[&rate=4.3366119451157585E-4]:5.538966673131E1,26[&rate=6.842047427131978E-4]:5.538966673131E1)[&rate=8.274634991344243E-4]:8.005296523748E0,32[&rate=3.981508591385736E-4]:6.339496325506E1)[&rate=4.1581275596121485E-4]:7.102891944163E0,(16[&rate=3.893506619132969E-4]:3.434880274462E1,((22[&rate=8.552635809385728E-4]:2.699097622169E0,21[&rate=2.3915657927218051E-4]:2.699097622169E0)[&rate=3.3580202137335123E-4]:5.641419505023E0,20[&rate=6.532334346726354E-4]:8.340517127192E0)[&rate=0.0017152880300573194]:2.600828561743E1)[&rate=9.208892287873354E-4]:3.61490524546E1)[&rate=1.84357192240398E-4]:1.578296321329E0,12[&rate=8.021576015962621E-4]:7.207615152055E1)[&rate=2.647477951628196E-4]:2.969289207181E-1)[&rate=3.539395002784733E-4]:2.980727325867E0)[&rate=9.208892287873354E-4]:3.667395173265E0,(17[&rate=7.574012483114577E-4]:6.993947247737E1,(27[&rate=4.426929798840149E-4]:2.844107385914E1,28[&rate=0.001134419975092282]:2.844107385914E1)[&rate=6.842047427131978E-4]:4.149839861823E1)[&rate=4.426929798840149E-4]:9.081730463034E0)[&rate=0.0017152880300573194]:4.820452243961E1); +tree STATE_670000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55116.853002459575,EEF_ucld_branchRates=-266.168517335019,lnP=-55116.853002459575,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.19027775760506E-4]:7.151761006601E0,9[&rate=8.339458387674147E-4]:7.151761006601E0)[&rate=8.929012203222385E-4]:9.702771409514E0,15[&rate=4.4190399242593044E-4]:1.685453241612E1)[&rate=0.0010062287226997005]:9.866399946306E1,(14[&rate=0.0010062287226997005]:5.498474019646E1,24[&rate=8.716057472016925E-4]:5.498474019646E1)[&rate=0.0011647254155173292]:6.053379168271E1)[&rate=5.436838109590337E-4]:1.112877697182E1,((((12[&rate=7.585932511312893E-4]:7.429709902079E1,((((((4[&rate=5.025190349667845E-4]:1.849037013371E0,2[&rate=3.519965909867006E-4]:1.849037013371E0)[&rate=5.10790926749044E-4]:4.45488133253E-1,3[&rate=8.339458387674147E-4]:2.294525146624E0)[&rate=6.294872922169767E-4]:8.792296115062E0,5[&rate=4.687072076969679E-4]:1.108682126169E1)[&rate=4.687072076969679E-4]:8.172446242302E-1,((7[&rate=4.94194779947634E-4]:6.681907049146E0,6[&rate=7.457059656869735E-4]:6.681907049146E0)[&rate=5.519322660294351E-4]:1.556381792263E0,1[&rate=6.882387483500263E-4]:8.238288841409E0)[&rate=8.716057472016925E-4]:3.665777044507E0)[&rate=6.882387483500263E-4]:5.862825823988E1,((30[&rate=6.989607482544537E-4]:5.606199711779E1,26[&rate=6.578220754550819E-4]:5.606199711779E1)[&rate=4.85799201441263E-4]:7.126965232425E0,32[&rate=4.4190399242593044E-4]:6.318896235022E1)[&rate=6.294872922169767E-4]:7.343361775574E0)[&rate=7.457059656869735E-4]:2.636627617638E0,(16[&rate=4.127265001220577E-4]:3.367437726641E1,((22[&rate=7.333533059950068E-4]:3.230138594103E0,21[&rate=5.519322660294351E-4]:3.230138594103E0)[&rate=6.481761322256923E-4]:4.906072889496E0,20[&rate=6.578220754550819E-4]:8.1362114836E0)[&rate=0.0014845129147848363]:2.553816578281E1)[&rate=0.0010062287226997005]:3.949457447702E1)[&rate=5.60218346827851E-4]:1.128147277362E0)[&rate=2.910563372861836E-4]:1.47756025974E0,25[&rate=5.272456236471697E-4]:7.577465928053E1)[&rate=4.127265001220577E-4]:1.036074702344E0,((((11[&rate=9.424482183480263E-4]:1.39427857057E1,29[&rate=5.68555331330826E-4]:1.39427857057E1)[&rate=7.862563015172847E-4]:5.618799693979E1,(33[&rate=5.68555331330826E-4]:6.272784883006E1,13[&rate=3.357766957525166E-4]:6.272784883006E1)[&rate=8.929012203222385E-4]:7.40293381542E0)[&rate=5.354595284002911E-4]:7.676357791605E-1,(19[&rate=5.85435163147481E-4]:2.05535233292E1,18[&rate=5.436838109590337E-4]:2.05535233292E1)[&rate=4.3251317628816103E-4]:5.034489509545E1)[&rate=5.436838109590337E-4]:3.506450300416E0,((10[&rate=4.599599543009219E-4]:2.586632148093E1,31[&rate=5.940050433300726E-4]:2.586632148093E1)[&rate=3.662427709572492E-4]:4.778350900037E1,23[&rate=5.354595284002911E-4]:7.36498304813E1)[&rate=3.910283752928945E-4]:7.550382437615E-1)[&rate=2.910563372861836E-4]:2.405865257815E0)[&rate=7.100275030143265E-4]:4.40215154427E0,(17[&rate=9.424482183480263E-4]:6.784034269203E1,(27[&rate=7.333533059950068E-4]:2.81106481907E1,28[&rate=0.0010975270180451462]:2.81106481907E1)[&rate=7.585932511312893E-4]:3.972969450133E1)[&rate=5.19027775760506E-4]:1.337254283511E1)[&rate=0.0014845129147848363]:4.543442332385E1); +tree STATE_680000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55134.13698356159,EEF_ucld_branchRates=-266.168517335019,lnP=-55134.13698356159,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.332472471567112E-4]:5.612414519731E0,9[&rate=7.612026443442311E-4]:5.612414519731E0)[&rate=6.253461333386901E-4]:9.334370180208E0,15[&rate=5.693168509780758E-4]:1.494678469994E1)[&rate=8.25556616574421E-4]:9.503868160394E1,(14[&rate=0.0010448395716731438]:5.119257774212E1,24[&rate=9.095375605533825E-4]:5.119257774212E1)[&rate=0.0011233137205841838]:5.879288856176E1)[&rate=8.377801459054232E-4]:1.060386730096E1,((((((((30[&rate=6.332472471567112E-4]:5.456830566494E1,26[&rate=6.814393212363921E-4]:5.456830566494E1)[&rate=5.167497348502066E-4]:5.869295112146E0,32[&rate=6.095403272488133E-4]:6.043760077708E1)[&rate=6.981106415195324E-4]:3.790776508058E0,12[&rate=8.25556616574421E-4]:6.422837728514E1)[&rate=7.612026443442311E-4]:2.660448622945E0,((((4[&rate=9.457548269443211E-4]:1.748036562711E0,2[&rate=7.066216470588544E-4]:1.748036562711E0)[&rate=0.0010151374651013207]:8.725074397986E-1,3[&rate=6.332472471567112E-4]:2.620544002509E0)[&rate=0.0010799839284053791]:8.069073784706E0,5[&rate=6.411646727316668E-4]:1.068961778722E1)[&rate=6.65141374041599E-4]:2.224676128487E0,((7[&rate=5.439527917735532E-4]:6.966466138835E0,6[&rate=4.96961030345272E-4]:6.966466138835E0)[&rate=5.610103027021635E-4]:1.356697230666E0,1[&rate=5.26088573747355E-4]:8.3231633695E0)[&rate=4.18407862950198E-4]:4.591130546202E0)[&rate=6.570991697686061E-4]:5.397453199239E1)[&rate=6.253461333386901E-4]:7.483798742747E-1,(16[&rate=7.422113485097415E-4]:3.201273273341E1,((22[&rate=9.89317456409471E-4]:2.86933318254E0,21[&rate=8.025884139395248E-4]:2.86933318254E0)[&rate=7.330461474894216E-4]:2.966289012642E0,20[&rate=0.0010151374651013207]:5.835622195182E0)[&rate=0.001445026085465548]:2.617711053823E1)[&rate=8.138453982233932E-4]:3.562447304895E1)[&rate=8.377801459054232E-4]:5.505723503879E0,25[&rate=6.174483191097787E-4]:7.314292928624E1)[&rate=6.570991697686061E-4]:2.522385057339E-1,((((33[&rate=9.457548269443211E-4]:6.291532479974E1,13[&rate=3.981801882847746E-4]:6.291532479974E1)[&rate=8.933919433079631E-4]:7.078262040493E0,(11[&rate=5.936364171326701E-4]:1.132788047054E1,29[&rate=0.0011233137205841838]:1.132788047054E1)[&rate=5.775093086208648E-4]:5.86657063697E1)[&rate=4.96961030345272E-4]:6.543065772144E-1,(19[&rate=6.016080271409667E-4]:2.111509591904E1,18[&rate=6.016080271409667E-4]:2.111509591904E1)[&rate=5.439527917735532E-4]:4.953279749841E1)[&rate=9.095375605533825E-4]:8.901840504656E-1,((10[&rate=4.498329753146973E-4]:2.207065111306E1,31[&rate=7.152699544846073E-4]:2.207065111306E1)[&rate=3.981801882847746E-4]:4.844434721424E1,23[&rate=4.750783383101788E-4]:7.05149983273E1)[&rate=4.351947106715141E-4]:1.023079140619E0)[&rate=5.26088573747355E-4]:1.857090324061E0)[&rate=6.174483191097787E-4]:5.593046603639E0,(17[&rate=7.422113485097415E-4]:7.004380804552E1,(27[&rate=7.710782572395897E-4]:2.611662274616E1,28[&rate=8.933919433079631E-4]:2.611662274616E1)[&rate=8.138453982233932E-4]:4.392718529936E1)[&rate=6.016080271409667E-4]:8.94440635009E0)[&rate=0.001445026085465548]:4.160111920923E1); +tree STATE_690000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55135.64955987243,EEF_ucld_branchRates=-266.168517335019,lnP=-55135.64955987243,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.07470144182548E-4]:7.323558200817E0,9[&rate=6.763026176976381E-4]:7.323558200817E0)[&rate=5.562533804352101E-4]:8.692903106947E0,15[&rate=6.455003191862226E-4]:1.601646130776E1)[&rate=9.80269815348712E-4]:9.552228902723E1,(14[&rate=8.274923124460559E-4]:5.633686831369E1,24[&rate=9.170105640541827E-4]:5.633686831369E1)[&rate=0.00107095156162089]:5.520188202131E1)[&rate=3.204658354432158E-4]:1.780589402838E1,((((((16[&rate=4.2392664255340846E-4]:3.441065580431E1,((22[&rate=6.3577557473739E-4]:2.804750037814E0,21[&rate=7.351271933418036E-4]:2.804750037814E0)[&rate=3.3624277262017763E-4]:4.14465589053E0,20[&rate=6.3577557473739E-4]:6.949405928345E0)[&rate=0.001456775635178059]:2.746124987596E1)[&rate=0.00107095156162089]:3.716314562271E1,((((4[&rate=5.645819020179279E-4]:1.835006833478E0,2[&rate=9.80269815348712E-4]:1.835006833478E0)[&rate=4.5855425480294243E-4]:1.286024718787E0,3[&rate=5.316858515991581E-4]:3.121031552265E0)[&rate=3.9543045805722036E-4]:9.101498851632E0,5[&rate=6.657356172365045E-4]:1.22225304039E1)[&rate=0.0010207011566066885]:1.885643156881E0,((7[&rate=2.770428149852224E-4]:9.179522438297E0,6[&rate=4.501351067006151E-4]:9.179522438297E0)[&rate=3.0164112204453394E-4]:1.885933331409E0,1[&rate=3.9543045805722036E-4]:1.106545576971E1)[&rate=5.815284260858559E-4]:3.042717791072E0)[&rate=6.169911033089532E-4]:5.746562786624E1)[&rate=7.1021823786281E-4]:1.166901692818E-1,(((30[&rate=7.224069377422487E-4]:5.517570068402E1,26[&rate=5.316858515991581E-4]:5.517570068402E1)[&rate=9.80269815348712E-4]:7.813541174672E0,32[&rate=5.316858515991581E-4]:6.298924185869E1)[&rate=5.155250493261968E-4]:8.424927131234E0,12[&rate=7.624452787734232E-4]:7.141416898993E1)[&rate=4.750831823219677E-4]:2.76322606371E-1)[&rate=5.07470144182548E-4]:6.321594454193E0,25[&rate=4.994137214524497E-4]:7.801208605049E1)[&rate=8.468412016787271E-4]:1.833790874924E0,((((11[&rate=6.763026176976381E-4]:1.134567618164E1,29[&rate=7.484466305116767E-4]:1.134567618164E1)[&rate=5.645819020179279E-4]:6.22075126994E1,(19[&rate=8.095820183578496E-4]:1.609344649784E1,18[&rate=5.398184525346335E-4]:1.609344649784E1)[&rate=4.2392664255340846E-4]:5.74597423832E1)[&rate=8.67923499368863E-4]:1.733155554508E-1,(33[&rate=7.351271933418036E-4]:6.108540116878E1,13[&rate=4.147511484421537E-4]:6.108540116878E1)[&rate=3.50111144442377E-4]:1.26411032677E1)[&rate=5.989563912626748E-4]:3.257033020261E0,((10[&rate=5.155250493261968E-4]:2.372983491454E1,31[&rate=5.989563912626748E-4]:2.372983491454E1)[&rate=3.50111144442377E-4]:5.175573612602E1,23[&rate=4.5855425480294243E-4]:7.548557104056E1)[&rate=8.468412016787271E-4]:1.497966416183E0)[&rate=4.994137214524497E-4]:2.86233946867E0)[&rate=5.398184525346335E-4]:1.880778254438E0,(17[&rate=8.095820183578496E-4]:6.723723323127E1,(27[&rate=4.994137214524497E-4]:2.718465098333E1,28[&rate=7.351271933418036E-4]:2.718465098333E1)[&rate=5.398184525346335E-4]:4.005258224794E1)[&rate=4.4157878795609857E-4]:1.448942194858E1)[&rate=0.001456775635178059]:4.761798918352E1); +tree STATE_700000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55140.12830808416,EEF_ucld_branchRates=-266.168517335019,lnP=-55140.12830808416,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.293942299771784E-4]:6.816364599765E0,9[&rate=5.196975043747654E-4]:6.816364599765E0)[&rate=2.674138220563884E-4]:7.654489755273E0,15[&rate=3.407831210641199E-4]:1.447085435504E1)[&rate=6.39581599237331E-4]:1.130851625524E2,(14[&rate=0.0013343378712252069]:5.539399529597E1,24[&rate=8.014029573794604E-4]:5.539399529597E1)[&rate=0.0010372421572314382]:7.216202161146E1)[&rate=3.740652705474283E-4]:9.307958352048E-2,((((((((30[&rate=6.548425724997632E-4]:5.146720287354E1,26[&rate=5.697511797718277E-4]:5.146720287354E1)[&rate=4.960412129420249E-4]:9.487161916014E0,32[&rate=3.740652705474283E-4]:6.095436478956E1)[&rate=4.844810731379266E-4]:9.395336427641E0,((((4[&rate=4.285868132786726E-4]:1.871957677264E0,2[&rate=5.077733158983972E-4]:1.871957677264E0)[&rate=5.442069725392251E-4]:1.09632119475E0,3[&rate=7.59618586734916E-4]:2.968278872014E0)[&rate=6.39581599237331E-4]:1.050343362166E1,5[&rate=3.6307833570352213E-4]:1.347171249367E1)[&rate=4.5063917928104364E-4]:2.019692579507E0,((7[&rate=1.7599404725414296E-4]:1.124698012643E1,6[&rate=3.058676607475147E-4]:1.124698012643E1)[&rate=8.014029573794604E-4]:8.586647808439E-1,1[&rate=3.293942299771784E-4]:1.210564490727E1)[&rate=0.0012531386026804745]:3.385760165906E0)[&rate=6.548425724997632E-4]:5.485829614402E1)[&rate=9.309699120966503E-4]:2.550499686106E-1,(16[&rate=4.176554362956887E-4]:3.281475653019E1,((22[&rate=0.0015795291953981745]:2.508598142633E0,21[&rate=9.983681784715326E-4]:2.508598142633E0)[&rate=7.040196388765956E-4]:4.188475478672E0,20[&rate=8.24071427581383E-4]:6.697073621305E0)[&rate=0.0013343378712252069]:2.611768290888E1)[&rate=0.0014377621960842033]:3.778999465562E1)[&rate=0.0010372421572314382]:3.687210002304E-1,12[&rate=9.013121545304382E-4]:7.097347218604E1)[&rate=5.96536511950492E-4]:3.581942776324E0,25[&rate=8.014029573794604E-4]:7.455541496236E1)[&rate=3.958792881155606E-4]:3.35022324795E0,((((33[&rate=0.0011297835690382268]:6.221225888005E1,13[&rate=4.617990584158785E-4]:6.221225888005E1)[&rate=1.7599404725414296E-4]:8.418930414773E0,(11[&rate=7.040196388765956E-4]:1.771820212437E1,29[&rate=5.96536511950492E-4]:1.771820212437E1)[&rate=4.844810731379266E-4]:5.291298717046E1)[&rate=2.2066154829021882E-4]:3.957305261917E0,(19[&rate=5.697511797718277E-4]:1.329454069437E1,18[&rate=4.617990584158785E-4]:1.329454069437E1)[&rate=3.407831210641199E-4]:6.129395386237E1)[&rate=4.0676016475723665E-4]:1.769510318106E0,((10[&rate=7.79965345058882E-4]:2.037012771553E1,31[&rate=8.24071427581383E-4]:2.037012771553E1)[&rate=2.674138220563884E-4]:5.44909536655E1,23[&rate=4.730733885443166E-4]:7.486108138102E1)[&rate=4.176554362956887E-4]:1.496923493825E0)[&rate=2.5317138230556964E-4]:1.547633335468E0)[&rate=5.318347257969951E-4]:2.121762994453E0,(17[&rate=0.0010806460762413238]:6.715777148381E1,(27[&rate=4.730733885443166E-4]:2.51073880265E1,28[&rate=0.0013343378712252069]:2.51073880265E1)[&rate=9.983681784715326E-4]:4.205038345731E1)[&rate=4.5063917928104364E-4]:1.286962972096E1)[&rate=0.0018026679720760691]:4.762169528618E1); +tree STATE_710000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55136.94839027386,EEF_ucld_branchRates=-266.168517335019,lnP=-55136.94839027386,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=1.5264523620499399E-4]:9.383995598303E0,9[&rate=9.795359406460761E-4]:9.383995598303E0)[&rate=6.526072955499941E-4]:8.406820106849E0,15[&rate=2.3663802381092256E-4]:1.779081570515E1)[&rate=7.265686434551246E-4]:9.730282565986E1,(14[&rate=0.0013792077821067046]:5.38748828709E1,24[&rate=3.9837097021466755E-4]:5.38748828709E1)[&rate=0.0012754199801798254]:6.121875849411E1)[&rate=0.0011942040480086176]:1.055709318722E1,((((((((30[&rate=8.746291561706587E-4]:5.097770373141E1,26[&rate=5.620304956146482E-4]:5.097770373141E1)[&rate=3.0509119811729786E-4]:1.357352057639E1,32[&rate=3.672628313485821E-4]:6.455122430781E1)[&rate=4.411213877214281E-4]:8.582235880608E0,((((4[&rate=5.355331656074953E-4]:1.892267484751E0,2[&rate=4.411213877214281E-4]:1.892267484751E0)[&rate=4.7478145624928046E-4]:9.599344480521E-1,3[&rate=6.360894533963673E-4]:2.852201932803E0)[&rate=5.620304956146482E-4]:1.080116272668E1,5[&rate=3.363878402726114E-4]:1.365336465948E1)[&rate=3.9837097021466755E-4]:2.966776603241E0,((7[&rate=1.5264523620499399E-4]:1.072263847876E1,6[&rate=4.195033508882124E-4]:1.072263847876E1)[&rate=6.202120712477371E-4]:1.168679985749E0,1[&rate=1.934745878223176E-4]:1.189131846451E1)[&rate=4.982728882192181E-4]:4.728822798219E0)[&rate=7.47510259493329E-4]:5.651331892569E1)[&rate=2.944146780090016E-4]:1.141815083548E0,(16[&rate=4.0888549512696287E-4]:3.532462801836E1,((22[&rate=0.0015220516990058562]:2.001437142614E0,21[&rate=7.696834942286057E-4]:2.001437142614E0)[&rate=2.835427008335132E-4]:4.10427317892E0,20[&rate=2.7241640259613724E-4]:6.105710321534E0)[&rate=0.0013792077821067046]:2.921891769683E1)[&rate=0.0010225339004177726]:3.89506472536E1)[&rate=0.0012754199801798254]:1.441523744206E0,12[&rate=6.878398483473545E-4]:7.571679901617E1)[&rate=2.3663802381092256E-4]:2.482493146663E0,25[&rate=5.901512271305364E-4]:7.819929216283E1)[&rate=6.049166161331998E-4]:4.125134919483E0,((((33[&rate=8.454522032095787E-4]:6.661072593952E1,13[&rate=3.7757860715946593E-4]:6.661072593952E1)[&rate=5.228101344633892E-4]:7.392634913597E0,(11[&rate=3.466901124492247E-4]:2.183817503989E1,29[&rate=3.0509119811729786E-4]:2.183817503989E1)[&rate=0.0010225339004177726]:5.216518581323E1)[&rate=4.3024260496510146E-4]:3.257324929182E0,(19[&rate=9.795359406460761E-4]:1.475512806635E1,18[&rate=4.411213877214281E-4]:1.475512806635E1)[&rate=2.092186584114861E-4]:6.250555771594E1)[&rate=3.466901124492247E-4]:3.325626456442E0,((10[&rate=4.8640805017986793E-4]:2.295224864895E1,31[&rate=4.195033508882124E-4]:2.295224864895E1)[&rate=4.6337160943241823E-4]:5.598453144754E1,23[&rate=4.195033508882124E-4]:7.893678009649E1)[&rate=7.696834942286057E-4]:1.649532142249E0)[&rate=9.410986647866771E-4]:1.738114843579E0)[&rate=3.672628313485821E-4]:4.128021293452E0,(17[&rate=7.47510259493329E-4]:7.690907525761E1,(27[&rate=3.260409656077729E-4]:3.571282683847E1,28[&rate=0.0011276364333469846]:3.571282683847E1)[&rate=7.696834942286057E-4]:4.119624841914E1)[&rate=5.228101344633892E-4]:9.543373118158E0)[&rate=0.001748116507259186]:3.919828617646E1); +tree STATE_720000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55128.449442100624,EEF_ucld_branchRates=-266.168517335019,lnP=-55128.449442100624,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.122660436130877E-4]:7.987473394883E0,9[&rate=9.771861944124702E-4]:7.987473394883E0)[&rate=6.775720828529747E-4]:8.167479803901E0,15[&rate=4.048608669707068E-4]:1.615495319878E1)[&rate=7.78249003540209E-4]:9.549021839584E1,(14[&rate=0.0010836199908987143]:5.548151312923E1,24[&rate=6.351246101292864E-4]:5.548151312923E1)[&rate=0.0011321717012223557]:5.616365846539E1)[&rate=9.24628418546089E-4]:9.232637674406E0,((((((((30[&rate=6.558894411540506E-4]:4.806382557869E1,26[&rate=7.003726153558904E-4]:4.806382557869E1)[&rate=8.805943734241041E-4]:1.407505222677E1,32[&rate=4.5634379674816224E-4]:6.213887780546E1)[&rate=5.12369495881262E-4]:5.491859941555E0,((((4[&rate=6.250325813047821E-4]:1.919730807118E0,2[&rate=4.2635643830718376E-4]:1.919730807118E0)[&rate=0.0011927407179625966]:1.466268896166E0,3[&rate=5.306342583559047E-4]:3.385999703284E0)[&rate=7.503624575416684E-4]:9.70730948948E0,5[&rate=4.3659469751538817E-4]:1.309330919276E1)[&rate=5.39774200309477E-4]:3.167729272628E0,((7[&rate=2.7525386722878714E-4]:9.981186868592E0,6[&rate=5.39774200309477E-4]:9.981186868592E0)[&rate=8.087163422971865E-4]:1.278003156962E0,1[&rate=3.6861330731481184E-4]:1.125919002555E1)[&rate=6.558894411540506E-4]:5.001848439838E0)[&rate=5.39774200309477E-4]:5.136969928162E1)[&rate=5.39774200309477E-4]:8.679922195849E-1,(16[&rate=5.767481351195162E-4]:3.07725554414E1,((22[&rate=5.861701835333398E-4]:2.041324846431E0,21[&rate=3.6861330731481184E-4]:2.041324846431E0)[&rate=5.956937770891632E-4]:3.479519748464E0,20[&rate=9.771861944124702E-4]:5.520844594895E0)[&rate=0.0011927407179625966]:2.525171084651E1)[&rate=0.0012736716063847962]:3.77261745252E1)[&rate=5.581481691225665E-4]:2.740560999286E0,12[&rate=7.78249003540209E-4]:7.123929096588E1)[&rate=9.49617178305027E-4]:2.578317745294E0,25[&rate=4.8474690679065427E-4]:7.381760871118E1)[&rate=3.223356328067485E-4]:2.64565775828E0,((((33[&rate=8.087163422971865E-4]:6.157750189521E1,13[&rate=3.018539725401538E-4]:6.157750189521E1)[&rate=7.931207578904385E-4]:9.612810214637E0,(11[&rate=5.489404149582388E-4]:1.965424884791E1,29[&rate=6.250325813047821E-4]:1.965424884791E1)[&rate=6.88818588625386E-4]:5.153606326193E1)[&rate=5.215048414311662E-4]:2.221102908027E0,(19[&rate=4.4657482960466837E-4]:1.432929494957E1,18[&rate=5.581481691225665E-4]:1.432929494957E1)[&rate=4.7539886854118665E-4]:5.90821200683E1)[&rate=8.609146969595136E-4]:1.290035662957E0,((10[&rate=5.032108006595401E-4]:2.251091474172E1,31[&rate=5.215048414311662E-4]:2.251091474172E1)[&rate=3.3957997155710745E-4]:5.180104156767E1,23[&rate=4.8474690679065427E-4]:7.431195630939E1)[&rate=0.0011321717012223557]:3.894943714395E-1)[&rate=9.24628418546089E-4]:1.761815788632E0)[&rate=4.4657482960466837E-4]:3.771380795396E0,(17[&rate=8.087163422971865E-4]:6.510416438206E1,(27[&rate=4.1580252822359643E-4]:2.866092527185E1,28[&rate=9.771861944124702E-4]:2.866092527185E1)[&rate=7.372181493919939E-4]:3.644323911021E1)[&rate=6.351246101292864E-4]:1.51304828828E1)[&rate=0.0013967572480254725]:4.064316200417E1); +tree STATE_730000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55123.37394567937,EEF_ucld_branchRates=-266.168517335019,lnP=-55123.37394567937,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.056207646375152E-4]:9.772763263451E0,9[&rate=3.9386452771739914E-4]:9.772763263451E0)[&rate=8.03683225666364E-4]:5.91530153699E0,15[&rate=6.570132708961053E-4]:1.568806480044E1)[&rate=9.456972790660324E-4]:9.771839965632E1,(14[&rate=8.20454508745269E-4]:5.528511655884E1,24[&rate=8.568357154453524E-4]:5.528511655884E1)[&rate=0.0013282343529626164]:5.812134789793E1)[&rate=0.001172273271174271]:1.524164513488E1,(((((((16[&rate=4.370360193245177E-4]:3.701482826609E1,((22[&rate=0.0011190244156028275]:2.219804977653E0,21[&rate=5.343497754586013E-4]:2.219804977653E0)[&rate=5.732500939869981E-4]:3.74139214294E0,20[&rate=4.6701189759304425E-4]:5.961197120592E0)[&rate=0.0012388958067284322]:3.10536311455E1)[&rate=9.728269241164533E-4]:3.197296049703E1,((((4[&rate=0.0012388958067284322]:1.82315039109E0,2[&rate=8.20454508745269E-4]:1.82315039109E0)[&rate=6.920510144562875E-4]:1.779621838518E0,3[&rate=0.0010363751804382398]:3.602772229607E0)[&rate=6.034301986111373E-4]:1.03193149202E1,5[&rate=3.424072001248378E-4]:1.392208714981E1)[&rate=0.0010028081044134356]:2.046303940137E0,((7[&rate=2.6158656201888625E-4]:1.048482217723E1,6[&rate=5.151874570961343E-4]:1.048482217723E1)[&rate=4.6701189759304425E-4]:1.28564912282E0,1[&rate=5.343497754586013E-4]:1.177047130004E1)[&rate=8.20454508745269E-4]:4.197919789903E0)[&rate=5.343497754586013E-4]:5.301939767318E1)[&rate=5.247580967153683E-4]:8.738783181674E-1,((30[&rate=7.301688519266929E-4]:4.574595455973E1,26[&rate=4.370360193245177E-4]:4.574595455973E1)[&rate=7.043692377553114E-4]:1.571399784132E1,32[&rate=4.160791525707901E-4]:6.145995240105E1)[&rate=5.53661520630715E-4]:8.401714680237E0)[&rate=4.6701189759304425E-4]:1.140598745579E0,12[&rate=7.437332018477281E-4]:7.100226582687E1)[&rate=2.6158656201888625E-4]:2.315096525538E0,25[&rate=8.03683225666364E-4]:7.331736235241E1)[&rate=3.5656813789722747E-4]:3.375069248454E0,((((33[&rate=6.570132708961053E-4]:6.38321495723E1,13[&rate=3.5656813789722747E-4]:6.38321495723E1)[&rate=5.343497754586013E-4]:6.719833087188E0,(11[&rate=5.932421268398473E-4]:2.159772384758E1,29[&rate=5.634133392863403E-4]:2.159772384758E1)[&rate=6.242770952549135E-4]:4.895425881191E1)[&rate=5.83187637131438E-4]:2.32869868433E0,(19[&rate=8.568357154453524E-4]:1.294358810079E1,18[&rate=7.578051453100227E-4]:1.294358810079E1)[&rate=3.2685383727471814E-4]:5.993709324304E1)[&rate=5.439789196912692E-4]:1.329822536213E0,((10[&rate=6.570132708961053E-4]:2.418216625765E1,31[&rate=6.800726754237616E-4]:2.418216625765E1)[&rate=4.0516349734695924E-4]:4.94541818067E1,23[&rate=4.471825930117107E-4]:7.363634806435E1)[&rate=5.056207646375152E-4]:5.741558156816E-1)[&rate=9.456972790660324E-4]:2.481927720826E0)[&rate=4.864258789790108E-4]:3.369536486002E0,(17[&rate=9.728269241164533E-4]:6.712371123121E1,(27[&rate=4.2668400806696364E-4]:3.100607197028E1,28[&rate=8.03683225666364E-4]:3.100607197028E1)[&rate=6.349732212603672E-4]:3.611763926093E1)[&rate=9.728269241164533E-4]:1.293825685565E1)[&rate=0.0013282343529626164]:4.858614150478E1); +tree STATE_740000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55123.3913407341,EEF_ucld_branchRates=-266.168517335019,lnP=-55123.3913407341,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.631925291606792E-4]:9.497007088047E0,9[&rate=5.809005039962499E-4]:9.497007088047E0)[&rate=8.609690262951109E-4]:5.219908811648E0,15[&rate=4.8534906312411926E-4]:1.471691589969E1)[&rate=6.959624691764749E-4]:9.143564111201E1,(14[&rate=8.799508958910943E-4]:4.947860433574E1,24[&rate=7.933012085614829E-4]:4.947860433574E1)[&rate=0.001463429763019754]:5.667395267596E1)[&rate=8.799508958910943E-4]:1.677483719418E1,((((((((((4[&rate=0.0010876603442605205]:2.552006355976E0,2[&rate=3.329801746908048E-4]:2.552006355976E0)[&rate=4.636155659974567E-4]:9.906171531159E-1,3[&rate=5.278118964155206E-4]:3.542623509092E0)[&rate=6.959624691764749E-4]:8.992425650154E0,5[&rate=4.960496021021578E-4]:1.253504915925E1)[&rate=5.383621483325547E-4]:2.16036645658E0,((7[&rate=3.7924598765910744E-4]:1.115483783249E1,6[&rate=4.1774215539665873E-4]:1.115483783249E1)[&rate=6.248350655625826E-4]:6.671922516268E-1,1[&rate=4.5251529414531933E-4]:1.182203008411E1)[&rate=3.650222457002848E-4]:2.873385531712E0)[&rate=5.595273205593947E-4]:5.058283196675E1,((30[&rate=8.609690262951109E-4]:4.753026502701E1,26[&rate=6.248350655625826E-4]:4.753026502701E1)[&rate=9.940618418373397E-4]:1.002129020563E1,32[&rate=4.8534906312411926E-4]:5.755155523264E1)[&rate=3.650222457002848E-4]:7.726692349934E0)[&rate=0.0010533538565948646]:1.394930303989E0,(16[&rate=2.631925291606792E-4]:2.971678563085E1,((22[&rate=7.490337605620428E-4]:2.146870738631E0,21[&rate=3.9266242000055425E-4]:2.146870738631E0)[&rate=0.001282608922025308]:2.891955215943E0,20[&rate=5.595273205593947E-4]:5.038825954573E0)[&rate=0.001359696122894222]:2.467795967627E1)[&rate=0.0010876603442605205]:3.695639225572E1)[&rate=9.212014743230491E-4]:2.398546845117E0,12[&rate=0.0010533538565948646]:6.907172473168E1)[&rate=6.248350655625826E-4]:1.439458199469E0,25[&rate=8.429097812907007E-4]:7.051118293115E1)[&rate=0.0016227031378053948]:9.96705956723E-1,((((11[&rate=6.47685421961946E-4]:1.745055929388E1,29[&rate=4.8534906312411926E-4]:1.745055929388E1)[&rate=5.595273205593947E-4]:4.939715913818E1,(33[&rate=0.0011700200410981112]:5.568694965714E1,13[&rate=4.2963458101015863E-4]:5.568694965714E1)[&rate=4.4120511295859047E-4]:1.116076877491E1)[&rate=7.087077216644496E-4]:1.251962502506E0,(19[&rate=5.701790298417351E-4]:1.329749071987E1,18[&rate=8.799508958910943E-4]:1.329749071987E1)[&rate=5.172572967162709E-4]:5.48021902147E1)[&rate=4.5251529414531933E-4]:1.960607907622E0,((10[&rate=7.490337605620428E-4]:2.542764416248E1,31[&rate=7.780320262841924E-4]:2.542764416248E1)[&rate=5.595273205593947E-4]:4.421142421141E1,23[&rate=6.026226748495655E-4]:6.963906837388E1)[&rate=5.278118964155206E-4]:4.212204683025E-1)[&rate=7.352091106444092E-4]:1.447600045685E0)[&rate=0.0011261380655656773]:1.988238484829E0,(17[&rate=0.0010223611320970074]:5.924186196691E1,(27[&rate=6.026226748495655E-4]:3.163049104084E1,28[&rate=8.799508958910943E-4]:3.163049104084E1)[&rate=7.933012085614829E-4]:2.761137092607E1)[&rate=6.593993448582895E-4]:1.425426540579E1)[&rate=0.001282608922025308]:4.943126683318E1); +tree STATE_750000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55132.68507874516,EEF_ucld_branchRates=-266.168517335019,lnP=-55132.68507874516,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.758058457353949E-4]:8.955668561954E0,9[&rate=6.631741946122945E-4]:8.955668561954E0)[&rate=4.573350758489119E-4]:5.898816585764E0,15[&rate=4.759871500750643E-4]:1.485448514772E1)[&rate=7.945340957059258E-4]:9.380501078005E1,(14[&rate=8.38589652933589E-4]:4.449291706563E1,24[&rate=9.354449400578019E-4]:4.449291706563E1)[&rate=9.608383499970157E-4]:6.416657886214E1)[&rate=0.0011757341926410616]:1.781724789846E1,(((25[&rate=6.820473462344158E-4]:7.31747700533E1,(((((((4[&rate=4.154266937654352E-4]:2.610328575045E0,2[&rate=4.759871500750643E-4]:2.610328575045E0)[&rate=0.0012731390146388081]:1.249421705328E0,3[&rate=6.103179253799095E-4]:3.859750280374E0)[&rate=8.727909142795875E-4]:8.991156234857E0,5[&rate=4.033704793154663E-4]:1.285090651523E1)[&rate=5.852348831588415E-4]:2.180385512041E0,((7[&rate=5.687594763393808E-4]:1.016825601032E1,6[&rate=4.759871500750643E-4]:1.016825601032E1)[&rate=7.945340957059258E-4]:1.934958949876E-1,1[&rate=5.935333782346822E-4]:1.036175190531E1)[&rate=4.2670378756619494E-4]:4.669540121965E0)[&rate=6.631741946122945E-4]:5.124103130833E1,((30[&rate=6.361667945953099E-4]:4.670481788035E1,26[&rate=8.084302908223347E-4]:4.670481788035E1)[&rate=5.769813236975734E-4]:8.034916971036E0,32[&rate=5.276382043475137E-4]:5.473973485139E1)[&rate=5.10891630405812E-4]:1.153258848421E1)[&rate=6.361667945953099E-4]:3.043867289032E0,(16[&rate=5.687594763393808E-4]:3.156305189163E1,((22[&rate=7.564992369646577E-4]:2.590103984927E0,21[&rate=7.226450443757622E-4]:2.590103984927E0)[&rate=9.608383499970157E-4]:3.187402419238E0,20[&rate=5.60555904900648E-4]:5.777506404165E0)[&rate=0.0011757341926410616]:2.578554548746E1)[&rate=7.335468998198809E-4]:3.7753138733E1)[&rate=5.35913626117201E-4]:3.769286160875E0,12[&rate=8.918716859079243E-4]:7.30854767855E1)[&rate=5.935333782346822E-4]:8.929326780076E-2)[&rate=4.759871500750643E-4]:9.850089175227E-1,((((11[&rate=3.3949671743888353E-4]:1.742154995075E1,29[&rate=6.018899743462611E-4]:1.742154995075E1)[&rate=9.354449400578019E-4]:5.117986570973E1,(33[&rate=7.686402084697027E-4]:5.297330864847E1,13[&rate=4.937443630127629E-4]:5.297330864847E1)[&rate=5.02379823772891E-4]:1.5628107012E1)[&rate=5.523567927143239E-4]:1.417688418508E0,(19[&rate=6.91803846308752E-4]:1.504360031851E1,18[&rate=7.945340957059258E-4]:1.504360031851E1)[&rate=4.759871500750643E-4]:5.497550376047E1)[&rate=5.10891630405812E-4]:2.601091598373E0,((10[&rate=6.820473462344158E-4]:2.499121319924E1,31[&rate=8.084302908223347E-4]:2.499121319924E1)[&rate=3.135226353074555E-4]:4.717627786596E1,23[&rate=5.523567927143239E-4]:7.21674910652E1)[&rate=7.120750945492981E-4]:4.527046121553E-1)[&rate=4.3737102392230347E-4]:1.539583293474E0)[&rate=7.226450443757622E-4]:2.307096506365E0,(17[&rate=9.126299575190982E-4]:5.866051275335E1,(27[&rate=4.3737102392230347E-4]:3.477236670925E1,28[&rate=8.727909142795875E-4]:3.477236670925E1)[&rate=0.0010621386109660028]:2.38881460441E1)[&rate=5.441477553518497E-4]:1.780636272384E1)[&rate=0.0010621386109660028]:5.000986834904E1); +tree STATE_760000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55150.344274581075,EEF_ucld_branchRates=-266.168517335019,lnP=-55150.344274581075,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.161291468611983E-4]:7.189257695141E0,9[&rate=0.0011903626042742877]:7.189257695141E0)[&rate=4.5674015777749557E-4]:6.320946196284E0,15[&rate=8.072365030640622E-4]:1.351020389142E1)[&rate=9.655632261109868E-4]:9.811781337475E1,(14[&rate=0.001071322979159706]:4.821791949564E1,24[&rate=8.224082043348873E-4]:4.821791949564E1)[&rate=7.076963858828783E-4]:6.341009777054E1)[&rate=5.354524874565591E-4]:1.768959069804E1,(((25[&rate=7.298370548255102E-4]:7.519823089237E1,(((((30[&rate=5.605866917362596E-4]:4.706448341378E1,26[&rate=5.015574262853454E-4]:4.706448341378E1)[&rate=9.153746462798916E-4]:1.081211166842E1,32[&rate=4.751813811978417E-4]:5.787659508219E1)[&rate=7.79159166954412E-4]:1.029893832248E1,((((4[&rate=7.185925598798446E-4]:3.364123092234E0,3[&rate=7.660748468525097E-4]:3.364123092234E0)[&rate=5.85927156280515E-4]:5.529457559644E-1,2[&rate=0.0011224590688588168]:3.917068848198E0)[&rate=5.186158731219478E-4]:1.047727936011E1,5[&rate=3.282974994686918E-4]:1.439434820831E1)[&rate=6.868162941899245E-4]:1.59424262133E0,((7[&rate=6.573654128419196E-4]:8.312004733168E0,6[&rate=0.0011224590688588168]:8.312004733168E0)[&rate=4.751813811978417E-4]:7.606523154467E-1,1[&rate=5.774344429551248E-4]:9.072657048615E0)[&rate=4.660700970382771E-4]:6.915933781023E0)[&rate=6.573654128419196E-4]:5.218694257503E1)[&rate=6.206745914128092E-4]:2.617864071711E0,(16[&rate=6.118433982982135E-4]:3.644644781979E1,((22[&rate=9.391148622776941E-4]:2.527320965062E0,21[&rate=8.937935852606769E-4]:2.527320965062E0)[&rate=5.522044117220682E-4]:4.539767730609E0,20[&rate=4.471455329963303E-4]:7.067088695671E0)[&rate=7.660748468525097E-4]:2.937935912412E1)[&rate=7.185925598798446E-4]:3.43469496566E1)[&rate=3.282974994686918E-4]:2.995798948003E0,12[&rate=6.479546946459751E-4]:7.378919642439E1)[&rate=0.0010301247482218808]:1.409034467989E0)[&rate=3.925573694836445E-4]:1.566203499627E0,((((11[&rate=4.928949801192232E-4]:2.125502929371E1,29[&rate=4.2692144471390223E-4]:2.125502929371E1)[&rate=5.186158731219478E-4]:4.92089079293E1,(33[&rate=8.384856031907015E-4]:6.413711202505E1,13[&rate=5.015574262853454E-4]:6.413711202505E1)[&rate=4.660700970382771E-4]:6.326825197961E0)[&rate=7.79159166954412E-4]:1.948460059021E0,(19[&rate=5.944837662736369E-4]:1.676898513063E1,18[&rate=5.438312171081104E-4]:1.676898513063E1)[&rate=5.605866917362596E-4]:5.56434121514E1)[&rate=6.296263321408835E-4]:1.924291276972E0,((10[&rate=4.660700970382771E-4]:2.341296355287E1,31[&rate=8.072365030640622E-4]:2.341296355287E1)[&rate=3.647761450527345E-4]:4.960582368352E1,23[&rate=5.438312171081104E-4]:7.301878723639E1)[&rate=4.2692144471390223E-4]:1.317901322612E0)[&rate=6.868162941899245E-4]:2.427745832999E0)[&rate=5.689921304287272E-4]:3.270228659264E0,(17[&rate=9.153746462798916E-4]:6.260651192925E1,(27[&rate=4.047306855484664E-4]:3.447648632055E1,28[&rate=8.739728737209499E-4]:3.447648632055E1)[&rate=8.739728737209499E-4]:2.813002560871E1)[&rate=6.118433982982135E-4]:1.742815112201E1)[&rate=0.0012927766098412268]:4.928294491296E1); +tree STATE_770000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.5324309916,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.5324309916,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.0238974300974706E-4]:7.253261647156E0,9[&rate=7.589619695539044E-4]:7.253261647156E0)[&rate=4.12125220914992E-4]:9.12847796961E0,15[&rate=6.49488662929709E-4]:1.638173961677E1)[&rate=5.937913081567761E-4]:9.409701631642E1,(14[&rate=0.0011912096431048278]:3.975017094763E1,24[&rate=8.113152095820876E-4]:3.975017094763E1)[&rate=0.0010714071853514511]:7.072858498555E1)[&rate=0.0011912096431048278]:1.896636375338E1,(((25[&rate=5.532001622028132E-4]:7.702040980136E1,(((((30[&rate=6.867922426092057E-4]:5.322669526753E1,26[&rate=6.867922426092057E-4]:5.322669526753E1)[&rate=6.152746115961397E-4]:9.830725724288E0,32[&rate=5.054360693218599E-4]:6.305742099182E1)[&rate=3.6107510832553337E-4]:9.16676698079E0,((((4[&rate=5.833764828162061E-4]:2.545133773583E0,3[&rate=7.928743206654859E-4]:2.545133773583E0)[&rate=6.263883367892908E-4]:6.734250398319E-1,2[&rate=4.498633554042796E-4]:3.218558813415E0)[&rate=5.242584596740147E-4]:1.057147494149E1,5[&rate=2.610554530980564E-4]:1.379003375491E1)[&rate=9.557666380719462E-4]:1.481840703734E0,((7[&rate=4.591284695900369E-4]:8.082341653522E0,6[&rate=0.0010271238247065225]:8.082341653522E0)[&rate=3.498379695018622E-4]:1.062214003147E0,1[&rate=5.054360693218599E-4]:9.144555656668E0)[&rate=3.9246683832268596E-4]:6.127318801974E0)[&rate=5.242584596740147E-4]:5.695231351397E1)[&rate=3.2553373988403726E-4]:2.272653668302E0,(16[&rate=3.8231195227624335E-4]:3.955834005638E1,((22[&rate=8.745828059780699E-4]:2.3311208713E0,21[&rate=4.12125220914992E-4]:2.3311208713E0)[&rate=7.000866172578479E-4]:5.642908590651E0,20[&rate=5.054360693218599E-4]:7.974029461951E0)[&rate=7.432556040938871E-4]:3.158431059443E1)[&rate=8.309442916705051E-4]:3.493850158453E1)[&rate=9.260219058890646E-4]:1.6252466032E0,12[&rate=8.991390376618166E-4]:7.612208824411E1)[&rate=3.6107510832553337E-4]:8.983215572436E-1)[&rate=8.745828059780699E-4]:1.355851143839E0,((((11[&rate=5.532001622028132E-4]:1.843918890631E1,29[&rate=4.8684804404665983E-4]:1.843918890631E1)[&rate=5.630992831785108E-4]:4.987818528387E1,(33[&rate=9.557666380719462E-4]:6.191248818911E1,13[&rate=2.8069237175515924E-4]:6.191248818911E1)[&rate=0.0012808139267449761]:6.404886001057E0)[&rate=4.591284695900369E-4]:5.230652870352E0,(19[&rate=7.589619695539044E-4]:1.675519880094E1,18[&rate=4.0238974300974706E-4]:1.675519880094E1)[&rate=5.337957946257013E-4]:5.679282825959E1)[&rate=4.6836888147953556E-4]:1.241624356231E0,((10[&rate=4.12125220914992E-4]:2.360672107627E1,31[&rate=7.754659491959088E-4]:2.360672107627E1)[&rate=2.9732753100044225E-4]:5.044888055845E1,23[&rate=6.044167786381218E-4]:7.405560163472E1)[&rate=4.311774879701899E-4]:7.34049782038E-1)[&rate=3.2553373988403726E-4]:3.586609528442E0)[&rate=5.054360693218599E-4]:4.405361639629E0,(17[&rate=6.739561946859455E-4]:7.009305980529E1,(27[&rate=4.405536422032317E-4]:3.366976166682E1,28[&rate=0.0012808139267449761]:3.366976166682E1)[&rate=7.000866172578479E-4]:3.642329813847E1)[&rate=7.589619695539044E-4]:1.268856277953E1)[&rate=0.0012808139267449761]:4.666349710174E1); +tree STATE_780000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.5851256631,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.5851256631,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.32455762836401E-4]:6.548146323772E0,9[&rate=0.0010392317039043034]:6.548146323772E0)[&rate=6.541635499501096E-4]:7.952713377332E0,15[&rate=4.920648734400933E-4]:1.45008597011E1)[&rate=8.662879864341047E-4]:9.091226369158E1,(14[&rate=0.0013830464839981586]:3.810289276906E1,24[&rate=0.0013157922424997706]:3.810289276906E1)[&rate=0.0011698264553000586]:6.731023062363E1)[&rate=0.001467502609352404]:1.961670405119E1,(((25[&rate=5.270435720871074E-4]:7.316305099791E1,(((((30[&rate=8.490498183783743E-4]:5.125456224221E1,26[&rate=3.859824625133157E-4]:5.125456224221E1)[&rate=0.001098535212258677]:9.22034236949E0,32[&rate=4.8010232876676185E-4]:6.04749046117E1)[&rate=4.6791826665215614E-4]:8.389911790119E0,((((4[&rate=7.298531169915985E-4]:1.921855104294E0,2[&rate=6.071193075486251E-4]:1.921855104294E0)[&rate=0.0010392317039043034]:9.090008890117E-1,3[&rate=7.433546206876778E-4]:2.830855993306E0)[&rate=3.3136261185624577E-4]:1.046230392531E1,5[&rate=3.859824625133157E-4]:1.329315991862E1)[&rate=7.166474757498419E-4]:1.024254469566E0,((7[&rate=5.270435720871074E-4]:7.748943341785E0,6[&rate=9.226476202246498E-4]:7.748943341785E0)[&rate=4.920648734400933E-4]:1.092775174262E0,1[&rate=4.1568174094347996E-4]:8.841718516047E0)[&rate=4.55458768540252E-4]:5.475695872138E0)[&rate=6.071193075486251E-4]:5.454740201364E1)[&rate=6.422177937349451E-4]:1.789362905414E0,(16[&rate=3.6956860044791857E-4]:3.654545409957E1,((22[&rate=0.0010392317039043034]:2.001445779714E0,21[&rate=4.294341564670067E-4]:2.001445779714E0)[&rate=9.651175420609862E-4]:4.342581949208E0,20[&rate=8.490498183783743E-4]:6.344027728921E0)[&rate=9.029966629325919E-4]:3.020142637064E1)[&rate=9.433094351219644E-4]:3.410872520767E1)[&rate=0.0011698264553000586]:1.418866193846E0,12[&rate=9.651175420609862E-4]:7.207304550108E1)[&rate=0.0013157922424997706]:1.090005496823E0)[&rate=0.0015812693603791978]:8.218518813755E-1,((((33[&rate=6.910165069045749E-4]:5.600065584164E1,13[&rate=3.3136261185624577E-4]:5.600065584164E1)[&rate=6.18714758273854E-4]:1.090803760067E1,(11[&rate=8.32455762836401E-4]:1.896827822641E1,29[&rate=5.727290519531828E-4]:1.896827822641E1)[&rate=7.859445585192172E-4]:4.79404152159E1)[&rate=0.001467502609352404]:2.176461597863E0,(19[&rate=6.662648774389848E-4]:1.362980736457E1,18[&rate=0.0013830464839981586]:1.362980736457E1)[&rate=5.613323804044898E-4]:5.545534767561E1)[&rate=4.8010232876676185E-4]:2.397331087099E0,((10[&rate=4.6791826665215614E-4]:2.59187116463E1,31[&rate=5.841457519424177E-4]:2.59187116463E1)[&rate=5.613323804044898E-4]:4.486428879488E1,23[&rate=5.270435720871074E-4]:7.078300044118E1)[&rate=4.920648734400933E-4]:6.994856860948E-1)[&rate=7.166474757498419E-4]:2.502416752005E0)[&rate=6.18714758273854E-4]:3.359656709797E0,(17[&rate=9.029966629325919E-4]:6.709728276972E1,(27[&rate=7.037103928517587E-4]:2.75805501486E1,28[&rate=0.0010676608534717297]:2.75805501486E1)[&rate=0.001098535212258677]:3.951673262113E1)[&rate=5.385130615672812E-4]:1.024727681936E1)[&rate=6.304079342682537E-4]:4.76852678548E1); +tree STATE_790000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.32527386783,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.32527386783,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.118482569334975E-4]:6.321518292542E0,9[&rate=6.29726678209237E-4]:6.321518292542E0)[&rate=3.2680027085809873E-4]:8.71427131593E0,15[&rate=9.903668907412751E-4]:1.503578960847E1)[&rate=7.380959259644978E-4]:1.023627936744E2,(14[&rate=0.0014570815389533026]:4.511125849093E1,24[&rate=7.699321944751683E-4]:4.511125849093E1)[&rate=9.337868601339419E-4]:7.22873247919E1)[&rate=9.608868924009312E-4]:1.207580602174E1,(((25[&rate=6.176828843754559E-4]:7.138407651894E1,((((16[&rate=4.965370587508066E-4]:3.724325599135E1,((22[&rate=9.903668907412751E-4]:2.028826555418E0,21[&rate=4.441054909961613E-4]:2.028826555418E0)[&rate=7.230545092062196E-4]:5.008828354334E0,20[&rate=4.118482569334975E-4]:7.037654909752E0)[&rate=0.0013462024311208906]:3.02056010816E1)[&rate=8.633497447201288E-4]:2.896663049248E1,((((4[&rate=4.227342060687943E-4]:2.02696631264E0,2[&rate=3.6592529911581823E-4]:2.02696631264E0)[&rate=0.0010586265181049335]:2.904307151312E-1,3[&rate=4.546548402879399E-4]:2.317397027771E0)[&rate=5.070353433508079E-4]:9.570435488018E0,5[&rate=5.496998513929008E-4]:1.188783251579E1)[&rate=6.420339534374775E-4]:2.308240387501E0,((7[&rate=4.118482569334975E-4]:8.614176361928E0,6[&rate=8.045596740635029E-4]:8.614176361928E0)[&rate=5.070353433508079E-4]:4.767300970468E-1,1[&rate=3.5351534733626055E-4]:9.090906458975E0)[&rate=5.606220112799831E-4]:5.105166444316E0)[&rate=6.058784057544988E-4]:5.201381358054E1)[&rate=8.426842919861049E-4]:1.667961315908E0,((30[&rate=7.380959259644978E-4]:5.04377657877E1,26[&rate=5.388976984687352E-4]:5.04377657877E1)[&rate=4.546548402879399E-4]:9.016642100139E0,32[&rate=2.9602474210386353E-4]:5.945440788784E1)[&rate=6.944559650387033E-4]:8.423439911897E0)[&rate=0.0012642210870195954]:1.61318483846E0,12[&rate=0.001022724370661214]:6.94910326382E1)[&rate=0.0011991513786994866]:1.89304388074E0)[&rate=5.716821251482823E-4]:2.894091811389E0,((((33[&rate=0.0010586265181049335]:5.343781925382E1,13[&rate=5.716821251482823E-4]:5.343781925382E1)[&rate=2.568426757476306E-4]:1.415182400653E1,(11[&rate=8.426842919861049E-4]:1.81599302277E1,29[&rate=5.388976984687352E-4]:1.81599302277E1)[&rate=8.231315012729861E-4]:4.942971303264E1)[&rate=3.1208797145621144E-4]:1.854704279298E0,(19[&rate=3.778808891391027E-4]:1.496362657021E1,18[&rate=9.608868924009312E-4]:1.496362657021E1)[&rate=3.8947427028808847E-4]:5.448072096944E1)[&rate=0.0012642210870195954]:3.532769849838E0,((10[&rate=7.699321944751683E-4]:2.518060891621E1,31[&rate=5.388976984687352E-4]:2.518060891621E1)[&rate=3.405293272278505E-4]:4.713208943576E1,23[&rate=4.756140648089928E-4]:7.231269835197E1)[&rate=4.118482569334975E-4]:6.644190375151E-1)[&rate=4.8606971358347535E-4]:1.301050940842E0)[&rate=5.281979188612834E-4]:3.973045615446E0,(17[&rate=8.852861109288588E-4]:6.784665261012E1,(27[&rate=6.546307900569246E-4]:2.612596129496E1,28[&rate=0.0012642210870195954]:2.612596129496E1)[&rate=6.29726678209237E-4]:4.172069131517E1)[&rate=4.227342060687943E-4]:1.040456133565E1)[&rate=0.0014570815389533026]:5.12231753588E1); +tree STATE_800000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.45385545644,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.45385545644,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.344531818068501E-4]:7.473871321152E0,9[&rate=4.2662812713404447E-4]:7.473871321152E0)[&rate=8.911133774872204E-4]:5.915892175199E0,15[&rate=6.435354057422978E-4]:1.338976349635E1)[&rate=7.337485329458045E-4]:1.011946259801E2,(14[&rate=8.235524178053974E-4]:4.724762275901E1,24[&rate=7.569312633842445E-4]:4.724762275901E1)[&rate=0.0010490500040153104]:6.73367667174E1)[&rate=7.951159846512456E-4]:1.040715570981E1,(((25[&rate=7.951159846512456E-4]:7.288176288474E1,(((((((4[&rate=5.81997957100826E-4]:1.518738449059E0,2[&rate=9.330073100773406E-4]:1.518738449059E0)[&rate=5.81997957100826E-4]:1.176069453994E0,3[&rate=7.015369741372303E-4]:2.694807903052E0)[&rate=5.991899353724678E-4]:8.471522169193E0,5[&rate=3.892026921650955E-4]:1.116633007225E1)[&rate=3.106508396855828E-4]:2.974709445245E0,((7[&rate=5.564482482021127E-4]:8.287760460211E0,1[&rate=6.078749675194837E-4]:8.287760460211E0)[&rate=5.308344811020112E-4]:1.776232214449E0,6[&rate=7.337485329458045E-4]:1.006399267466E1)[&rate=6.716728070653385E-4]:4.077046842831E0)[&rate=5.135012924657135E-4]:5.239160553079E1,((30[&rate=6.078749675194837E-4]:4.644365786556E1,26[&rate=5.479381239117166E-4]:4.644365786556E1)[&rate=0.0011423543148913545]:9.567826637987E0,32[&rate=7.569312633842445E-4]:5.601148450354E1)[&rate=4.957706115010657E-4]:1.052116054473E1)[&rate=5.81997957100826E-4]:1.693526730981E0,(16[&rate=4.7742823738814236E-4]:3.891053381069E1,((22[&rate=4.6794098920812364E-4]:3.232157713506E0,21[&rate=9.111714979842913E-4]:3.232157713506E0)[&rate=5.905688301678444E-4]:5.532747840212E0,20[&rate=5.564482482021127E-4]:8.764905553717E0)[&rate=0.0011423543148913545]:3.014562825698E1)[&rate=8.911133774872204E-4]:2.931563796856E1)[&rate=0.001090688367265143]:4.336740880408E0,12[&rate=8.235524178053974E-4]:7.256291265967E1)[&rate=4.866917863393037E-4]:3.188502250703E-1)[&rate=6.527547626760437E-4]:1.433835129946E0,((((33[&rate=9.330073100773406E-4]:5.635907564719E1,13[&rate=4.7742823738814236E-4]:5.635907564719E1)[&rate=6.435354057422978E-4]:9.488896394807E0,(11[&rate=4.7742823738814236E-4]:1.845554322509E1,29[&rate=5.135012924657135E-4]:1.845554322509E1)[&rate=8.725311421628182E-4]:4.739242881691E1)[&rate=5.0469766747749E-4]:1.552047354943E0,(19[&rate=0.0010490500040153104]:1.463503135761E1,18[&rate=8.911133774872204E-4]:1.463503135761E1)[&rate=3.7434440306935836E-4]:5.276498803933E1)[&rate=4.0263544986695454E-4]:4.737925278575E0,((10[&rate=5.564482482021127E-4]:1.973871352172E1,31[&rate=9.330073100773406E-4]:1.973871352172E1)[&rate=4.6794098920812364E-4]:5.152284378023E1,23[&rate=4.3760973935425874E-4]:7.126155730195E1)[&rate=7.691532865968833E-4]:8.763873735632E-1)[&rate=5.905688301678444E-4]:2.177653339166E0)[&rate=6.435354057422978E-4]:3.110086854488E0,(17[&rate=8.089854819802062E-4]:6.9925847292E1,(27[&rate=4.48096858474827E-4]:2.642222358937E1,28[&rate=0.0010490500040153104]:2.642222358937E1)[&rate=7.119773553102284E-4]:4.350362370263E1)[&rate=4.2662812713404447E-4]:7.499837577172E0)[&rate=0.0012109346357979992]:4.756586031704E1); +tree STATE_810000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55160.14298629151,EEF_ucld_branchRates=-266.168517335019,lnP=-55160.14298629151,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.36356383532107E-4]:7.59589354893E0,9[&rate=0.0011620402326078]:7.59589354893E0)[&rate=5.296066976212456E-4]:4.535024859767E0,15[&rate=5.942088904771761E-4]:1.21309184087E1)[&rate=7.36356383532107E-4]:1.112737502884E2,(14[&rate=9.938468527416538E-4]:4.625884361997E1,24[&rate=7.36356383532107E-4]:4.625884361997E1)[&rate=7.8514332711469E-4]:7.714582507715E1)[&rate=0.0011620402326078]:3.021929372181E0,(((25[&rate=6.055807748800204E-4]:7.600886195508E1,(((((((4[&rate=8.414718514233315E-4]:1.462174261868E0,2[&rate=4.988272486160912E-4]:1.462174261868E0)[&rate=4.379340646527872E-4]:6.486620532412E-1,3[&rate=4.0666323213377697E-4]:2.110836315109E0)[&rate=9.629465122293221E-4]:1.028669070209E1,5[&rate=3.239993441142344E-4]:1.23975270172E1)[&rate=9.347786471579876E-4]:2.223339018187E0,((7[&rate=4.684405913450021E-4]:7.114679108352E0,6[&rate=3.5000216052246763E-4]:7.114679108352E0)[&rate=4.886784285208488E-4]:1.289340975605E0,1[&rate=4.276334136752185E-4]:8.404020083957E0)[&rate=5.505742274465613E-4]:6.21684595143E0)[&rate=5.400343681870574E-4]:5.39350673863E1,((30[&rate=6.17179272099044E-4]:4.92164117078E1,26[&rate=7.213749476077792E-4]:4.92164117078E1)[&rate=5.942088904771761E-4]:1.165773257327E1,32[&rate=4.4815202371425273E-4]:6.087414428107E1)[&rate=2.93997772410455E-4]:7.681789140616E0)[&rate=3.736879211522297E-4]:1.114862637018E0,(16[&rate=3.8494833127585167E-4]:3.750682027101E1,((22[&rate=0.0013018931538154232]:3.12132718283E0,21[&rate=8.216795846220895E-4]:3.12132718283E0)[&rate=5.192742321792005E-4]:6.250751523375E0,20[&rate=4.1722094471814295E-4]:9.372078706205E0)[&rate=0.0011620402326078]:2.813474156481E1)[&rate=0.001223959887129298]:3.216397578769E1)[&rate=9.938468527416538E-4]:2.885021150128E0,12[&rate=5.400343681870574E-4]:7.255581720883E1)[&rate=3.8494833127585167E-4]:3.453044746254E0)[&rate=5.400343681870574E-4]:1.3673376839E0,((((11[&rate=5.612435381832351E-4]:1.620914494695E1,29[&rate=6.17179272099044E-4]:1.620914494695E1)[&rate=8.414718514233315E-4]:5.38250238073E1,(19[&rate=4.4815202371425273E-4]:1.721542613831E1,18[&rate=9.938468527416538E-4]:1.721542613831E1)[&rate=3.620693463415381E-4]:5.281874261594E1)[&rate=9.347786471579876E-4]:1.540847845411E0,(33[&rate=7.519321805323345E-4]:6.055285532981E1,13[&rate=6.7945039583527E-4]:6.055285532981E1)[&rate=9.088714358781018E-4]:1.102216126985E1)[&rate=3.5000216052246763E-4]:2.941065167121E0,((10[&rate=3.959212118797708E-4]:1.812565672046E1,31[&rate=7.069298325344E-4]:1.812565672046E1)[&rate=2.5572077704553574E-4]:5.436626475235E1,23[&rate=5.192742321792005E-4]:7.249192147281E1)[&rate=8.029451197239374E-4]:2.024160293975E0)[&rate=4.0666323213377697E-4]:2.860117872201E0)[&rate=5.090200806007932E-4]:5.155254799853E0,(17[&rate=9.347786471579876E-4]:6.846608139923E1,(27[&rate=5.612435381832351E-4]:2.284721914937E1,28[&rate=0.0013018931538154232]:2.284721914937E1)[&rate=6.411503311032941E-4]:4.561886224986E1)[&rate=3.096635299177424E-4]:1.406537303961E1)[&rate=0.0014071655987174226]:4.389514363046E1); +tree STATE_820000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55120.59142002682,EEF_ucld_branchRates=-266.168517335019,lnP=-55120.59142002682,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.725184709564013E-4]:7.648889747613E0,9[&rate=0.0012227333064891155]:7.648889747613E0)[&rate=5.35152740521634E-4]:5.39301144569E0,15[&rate=8.725184709564013E-4]:1.30419011933E1)[&rate=8.508584929923043E-4]:9.497572601925E1,(14[&rate=0.0012227333064891155]:4.351972279638E1,24[&rate=7.023459032993295E-4]:4.351972279638E1)[&rate=9.211789564110922E-4]:6.449790441617E1)[&rate=0.0012227333064891155]:1.936946588284E1,(((25[&rate=7.604943317455502E-4]:7.470961470564E1,(((((((4[&rate=4.3955591828141955E-4]:2.117222990147E0,2[&rate=4.2000501538744836E-4]:2.117222990147E0)[&rate=4.777373060031808E-4]:3.30833574208E-1,3[&rate=5.854154224516317E-4]:2.448056564355E0)[&rate=4.2000501538744836E-4]:9.804693129915E0,5[&rate=2.652263284289962E-4]:1.225274969427E1)[&rate=4.491796276388419E-4]:3.356216190539E0,((7[&rate=5.35152740521634E-4]:7.716039453317E0,6[&rate=7.302475930005035E-4]:7.716039453317E0)[&rate=4.967160997971764E-4]:1.092125297797E0,1[&rate=4.2000501538744836E-4]:8.808164751114E0)[&rate=5.548654477271905E-4]:6.800801133696E0)[&rate=3.174480024555104E-4]:5.21640298122E1,((30[&rate=6.175708913157619E-4]:4.851867199016E1,26[&rate=7.160342131365585E-4]:4.851867199016E1)[&rate=7.023459032993295E-4]:9.050684368192E0,32[&rate=3.6764979213999943E-4]:5.756935635835E1)[&rate=3.023439000645008E-4]:1.020363933865E1)[&rate=5.158116173993929E-4]:3.947958749798E0,(16[&rate=3.8942385597842737E-4]:3.820237227343E1,((22[&rate=5.649011679486583E-4]:4.525374108061E0,21[&rate=3.8942385597842737E-4]:4.525374108061E0)[&rate=5.649011679486583E-4]:4.680849462953E0,20[&rate=5.158116173993929E-4]:9.206223571014E0)[&rate=0.0010989721626749277]:2.899614870242E1)[&rate=0.0011538731812381256]:3.351858217337E1)[&rate=9.48909873618318E-4]:2.001435880492E0,12[&rate=9.79599276844559E-4]:7.37223903273E1)[&rate=5.158116173993929E-4]:9.87224378345E-1)[&rate=8.958529695589416E-4]:3.667097996496E0,((((11[&rate=7.936794917001E-4]:1.528789723766E1,29[&rate=6.519008338728006E-4]:1.528789723766E1)[&rate=7.023459032993295E-4]:5.806687102135E1,(33[&rate=8.116186181675928E-4]:6.152983166931E1,13[&rate=4.2000501538744836E-4]:6.152983166931E1)[&rate=5.254436081906409E-4]:1.18249365897E1)[&rate=6.175708913157619E-4]:1.160146174385E0,(19[&rate=4.2000501538744836E-4]:1.54623602193E1,18[&rate=7.936794917001E-4]:1.54623602193E1)[&rate=3.4404567121025314E-4]:5.905255421409E1)[&rate=5.750786635652028E-4]:1.858525070125E0,((10[&rate=5.959298378822465E-4]:2.240011236404E1,31[&rate=4.3955591828141955E-4]:2.240011236404E1)[&rate=3.787174200706339E-4]:5.227891346214E1,23[&rate=4.777373060031808E-4]:7.467902582618E1)[&rate=0.0011538731812381256]:1.694413677339E0)[&rate=7.766748452711889E-4]:2.00327319862E0)[&rate=3.5613186538797865E-4]:2.003941891158E0,(17[&rate=6.175708913157619E-4]:7.042862105927E1,(27[&rate=5.254436081906409E-4]:2.520966735937E1,28[&rate=0.0011538731812381256]:2.520966735937E1)[&rate=7.302475930005035E-4]:4.521895369989E1)[&rate=3.5613186538797865E-4]:9.952033534029E0)[&rate=8.958529695589416E-4]:4.700643850209E1); +tree STATE_830000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55143.38273308143,EEF_ucld_branchRates=-266.168517335019,lnP=-55143.38273308143,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.506555873556851E-4]:7.782559943303E0,9[&rate=4.4134343887960987E-4]:7.782559943303E0)[&rate=4.795290057618743E-4]:3.886493701882E0,15[&rate=5.295237023593705E-4]:1.166905364519E1)[&rate=9.874478348461955E-4]:9.434401092198E1,(14[&rate=0.0011380672227444576]:4.140097174971E1,24[&rate=8.371498644216759E-4]:4.140097174971E1)[&rate=8.617805661195788E-4]:6.461209281745E1)[&rate=0.0012129038251036403]:2.027672574672E1,(((25[&rate=6.595978307798603E-4]:7.578405838826E1,(((16[&rate=3.749228995664782E-4]:3.919324198424E1,((22[&rate=3.127711449059808E-4]:2.523869494099E0,21[&rate=7.366813638643875E-4]:2.523869494099E0)[&rate=0.0012129038251036403]:6.596889354711E0,20[&rate=7.198366130957052E-4]:9.120758848811E0)[&rate=0.001314217762520253]:3.007248313543E1)[&rate=0.0010295070770397566]:3.371750487466E1,(((30[&rate=8.371498644216759E-4]:5.091051873416E1,26[&rate=4.6030977385842076E-4]:5.091051873416E1)[&rate=5.399903353083351E-4]:8.338346113434E0,32[&rate=5.726652849829668E-4]:5.924886484759E1)[&rate=4.0363270993555665E-4]:1.071153093659E1,((((4[&rate=8.371498644216759E-4]:2.009648719856E0,2[&rate=4.319144420999477E-4]:2.009648719856E0)[&rate=6.884435116591824E-4]:1.02356672841E0,3[&rate=4.698798128342713E-4]:3.033215448265E0)[&rate=3.4503991728950775E-4]:9.273018170191E0,5[&rate=3.941413644910323E-4]:1.230623361846E1)[&rate=3.3463164790819617E-4]:3.007315054923E0,((7[&rate=3.127711449059808E-4]:7.405224186519E0,6[&rate=5.295237023593705E-4]:7.405224186519E0)[&rate=7.930929148350972E-4]:1.434749012153E0,1[&rate=3.749228995664782E-4]:8.839973198672E0)[&rate=7.037859961249325E-4]:6.473575474709E0)[&rate=6.077355501000912E-4]:5.46468471108E1)[&rate=3.6513857614309795E-4]:2.950351074716E0)[&rate=8.371498644216759E-4]:8.526486969747E-1,12[&rate=7.198366130957052E-4]:7.376339555587E1)[&rate=3.749228995664782E-4]:2.020662832387E0)[&rate=4.698798128342713E-4]:4.042041478786E-1,((((33[&rate=5.726652849829668E-4]:5.640319059084E1,13[&rate=2.8882627607631475E-4]:5.640319059084E1)[&rate=2.6127515959781857E-4]:1.386073688442E1,(19[&rate=4.795290057618743E-4]:1.772321736202E1,18[&rate=7.731771059123632E-4]:1.772321736202E1)[&rate=4.5080302175045246E-4]:5.254071011324E1)[&rate=9.180184465772864E-4]:2.102766722736E0,(11[&rate=4.89273163642694E-4]:1.658910594997E1,29[&rate=3.941413644910323E-4]:1.658910594997E1)[&rate=6.595978307798603E-4]:5.577758824802E1)[&rate=3.127711449059808E-4]:2.104229074197E0,((10[&rate=5.19236459853593E-4]:2.529787114429E1,31[&rate=5.091104187669138E-4]:2.529787114429E1)[&rate=2.2625527042442634E-4]:4.900331340396E1,23[&rate=4.795290057618743E-4]:7.430118454825E1)[&rate=3.749228995664782E-4]:1.697387239375E-1)[&rate=3.4503991728950775E-4]:1.717339263947E0)[&rate=6.737353930319007E-4]:3.253259998037E0,(17[&rate=7.544214387129368E-4]:6.906637409058E1,(27[&rate=5.615399158351626E-4]:2.999544425304E1,28[&rate=0.0011380672227444576]:2.999544425304E1)[&rate=6.595978307798603E-4]:3.907092983754E1)[&rate=2.8882627607631475E-4]:1.037514844359E1)[&rate=0.0011380672227444576]:4.684826777971E1); +tree STATE_840000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55131.18910395327,EEF_ucld_branchRates=-266.168517335019,lnP=-55131.18910395327,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.583069542784543E-4]:6.117143488927E0,9[&rate=0.0012299023974914984]:6.117143488927E0)[&rate=0.0010488734591935682]:5.603530467021E0,15[&rate=4.661037081356037E-4]:1.172067395595E1)[&rate=8.853541708933094E-4]:9.164483155766E1,(14[&rate=0.0013807987099183428]:4.191557849998E1,24[&rate=8.440921460119056E-4]:4.191557849998E1)[&rate=7.728624574174855E-4]:6.144992701362E1)[&rate=9.318680455838292E-4]:2.47085651122E1,(((25[&rate=8.068780213905441E-4]:7.477336523255E1,(((16[&rate=4.4438089546392385E-4]:3.967397877284E1,((22[&rate=0.0014945823357483995]:3.086250918198E0,21[&rate=4.221997750956211E-4]:3.086250918198E0)[&rate=6.093317210266982E-4]:5.618870963929E0,20[&rate=5.198295911378435E-4]:8.705121882128E0)[&rate=0.0013807987099183428]:3.096885689071E1)[&rate=0.0012966726203407185]:3.055665511382E1,12[&rate=8.068780213905441E-4]:7.023063388666E1)[&rate=7.568527955538441E-4]:2.21960752985E0,(((30[&rate=9.576214667316884E-4]:5.36823409797E1,26[&rate=6.212182604248836E-4]:5.36823409797E1)[&rate=6.212182604248836E-4]:9.51431037006E0,32[&rate=5.415364702796566E-4]:6.319665134976E1)[&rate=2.355208882733238E-4]:6.570205831179E0,((((4[&rate=4.221997750956211E-4]:1.976352570595E0,2[&rate=3.6237496658911804E-4]:1.976352570595E0)[&rate=9.07860229731748E-4]:4.541350616624E-1,3[&rate=5.861403475132309E-4]:2.430487632258E0)[&rate=2.6324041831210304E-4]:9.450363799009E0,5[&rate=3.349781280566697E-4]:1.188085143127E1)[&rate=9.576214667316884E-4]:2.80104060173E0,((7[&rate=4.333645933367294E-4]:8.185061157772E0,6[&rate=8.853541708933094E-4]:8.185061157772E0)[&rate=7.895136099767679E-4]:7.631671163362E-1,1[&rate=5.52511604333313E-4]:8.948228274108E0)[&rate=9.318680455838292E-4]:5.733663758889E0)[&rate=3.6237496658911804E-4]:5.508496514794E1)[&rate=3.8736315315597667E-4]:2.683384235567E0)[&rate=5.306484818843934E-4]:2.323123816047E0)[&rate=9.854263304344374E-4]:2.411714867461E0,((((11[&rate=4.108455093504324E-4]:1.581214762123E1,29[&rate=3.349781280566697E-4]:1.581214762123E1)[&rate=7.568527955538441E-4]:5.533303712599E1,(33[&rate=5.415364702796566E-4]:6.122852567438E1,13[&rate=4.5528373968640676E-4]:6.122852567438E1)[&rate=7.414220386858697E-4]:9.91665907285E0)[&rate=3.992530614549727E-4]:1.163922237927E0,(19[&rate=6.093317210266982E-4]:1.910895743496E1,18[&rate=6.712291363893997E-4]:1.910895743496E1)[&rate=5.635918490500139E-4]:5.32001495502E1)[&rate=4.983251387849613E-4]:3.597980851619E0,((10[&rate=6.333272930438302E-4]:2.132584444595E1,31[&rate=6.333272930438302E-4]:2.132584444595E1)[&rate=4.5528373968640676E-4]:5.436813470751E1,23[&rate=4.4438089546392385E-4]:7.569397915346E1)[&rate=8.25038639177644E-4]:2.131086833172E-1)[&rate=4.983251387849613E-4]:1.277992263241E0)[&rate=5.52511604333313E-4]:8.473170531354E0,(17[&rate=0.0011271339756987627]:8.029534575012E1,(27[&rate=3.751019494446764E-4]:2.998202207614E1,28[&rate=0.0011745079642863409]:2.998202207614E1)[&rate=5.52511604333313E-4]:5.031332367398E1)[&rate=6.980840477509724E-4]:5.362904881248E0)[&rate=0.0013807987099183428]:4.241581999444E1); +tree STATE_850000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55107.989193203604,EEF_ucld_branchRates=-266.168517335019,lnP=-55107.989193203604,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.901499101678172E-4]:6.432815542754E0,9[&rate=0.0012424526694587287]:6.432815542754E0)[&rate=6.710917671905881E-4]:6.34007728269E0,15[&rate=8.139553509342538E-4]:1.277289282544E1)[&rate=7.811239635211544E-4]:1.007816193011E2,(14[&rate=0.0013177025627507883]:4.431760162153E1,24[&rate=9.121510518604724E-4]:4.431760162153E1)[&rate=0.0011326087490347988]:6.923691050505E1)[&rate=3.193121109636076E-4]:1.298411519767E1,(((25[&rate=6.961757940263124E-4]:7.870872969651E1,((12[&rate=9.121510518604724E-4]:7.338507991885E1,(16[&rate=5.386507872486772E-4]:4.040338179798E1,((22[&rate=8.901499101678172E-4]:3.558574226266E0,21[&rate=4.0127612537553043E-4]:3.558574226266E0)[&rate=7.365257678052527E-4]:6.773835594906E0,20[&rate=6.130240660966053E-4]:1.033240982117E1)[&rate=0.0012424526694587287]:3.007097197681E1)[&rate=0.0014190139752666567]:3.298169812087E1)[&rate=3.355002141254822E-4]:2.513229787435E0,(((30[&rate=6.130240660966053E-4]:5.470721365309E1,26[&rate=5.593836233582823E-4]:5.470721365309E1)[&rate=9.121510518604724E-4]:8.565483861557E0,32[&rate=3.502799929766801E-4]:6.327269751465E1)[&rate=4.456891812553701E-4]:7.937948623335E0,((((4[&rate=0.0010898176834783474]:2.107766872221E0,3[&rate=2.519446732150179E-4]:2.107766872221E0)[&rate=3.8938227261411625E-4]:3.934031917792E-1,2[&rate=6.3557818399442E-4]:2.501170064001E0)[&rate=6.3557818399442E-4]:7.165919578443E0,5[&rate=5.181255781187556E-4]:9.667089642444E0)[&rate=3.6403353576627666E-4]:3.573475695282E0,((7[&rate=4.8741025438541667E-4]:8.850671530135E0,6[&rate=7.50855425062406E-4]:8.850671530135E0)[&rate=4.456891812553701E-4]:1.268487269741E0,1[&rate=4.239878242831944E-4]:1.011915879988E1)[&rate=4.3493912970669E-4]:3.121406537849E0)[&rate=5.593836233582823E-4]:5.797008080026E1)[&rate=5.489826400145201E-4]:4.687663568305E0)[&rate=5.698706965416856E-4]:2.810419990222E0)[&rate=5.07896573635833E-4]:1.287885151112E0,((((11[&rate=4.6674251776796395E-4]:1.672505616658E1,29[&rate=5.911712884186903E-4]:1.672505616658E1)[&rate=5.593836233582823E-4]:5.891976849923E1,(33[&rate=9.611023675350458E-4]:6.353051344182E1,13[&rate=4.6674251776796395E-4]:6.353051344182E1)[&rate=5.489826400145201E-4]:1.211431122399E1)[&rate=0.0010188706897049764]:1.11304233315E0,(19[&rate=7.811239635211544E-4]:1.9577877511E1,18[&rate=6.242035907587395E-4]:1.9577877511E1)[&rate=3.8938227261411625E-4]:5.717998948797E1)[&rate=8.139553509342538E-4]:2.310539503629E0,((10[&rate=6.130240660966053E-4]:3.325315432695E1,31[&rate=5.07896573635833E-4]:3.325315432695E1)[&rate=4.3493912970669E-4]:4.46507936094E1,23[&rate=4.7711079393141924E-4]:7.790394793635E1)[&rate=8.315263240811577E-4]:1.164458566244E0)[&rate=7.50855425062406E-4]:9.282083450276E-1)[&rate=6.710917671905881E-4]:4.151794711775E0,(17[&rate=8.499979529494374E-4]:7.483537119704E1,(27[&rate=4.1278660635779704E-4]:3.486722617287E1,28[&rate=0.0012424526694587287]:3.486722617287E1)[&rate=7.657027589676421E-4]:3.996814502417E1)[&rate=9.611023675350458E-4]:9.313038362351E0)[&rate=0.0013177025627507883]:4.239021776486E1); +tree STATE_860000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55135.82232874746,EEF_ucld_branchRates=-266.168517335019,lnP=-55135.82232874746,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.454531732666434E-4]:7.030634821416E0,9[&rate=7.710375350690039E-4]:7.030634821416E0)[&rate=4.6709171425443104E-4]:4.467586169634E0,15[&rate=8.811181484187512E-4]:1.149822099105E1)[&rate=9.430823536957584E-4]:9.08815378505E1,(14[&rate=0.001460710684532219]:4.354645003043E1,24[&rate=9.209696802012094E-4]:4.354645003043E1)[&rate=0.0011840430001405424]:5.883330881113E1)[&rate=0.001332005351713493]:2.024764992007E1,(((25[&rate=7.449441167790197E-4]:7.192756910193E1,((12[&rate=8.294967230975612E-4]:6.866103325806E1,(16[&rate=4.6709171425443104E-4]:3.457560145238E1,((22[&rate=5.070120935988487E-4]:4.342561923179E0,21[&rate=4.3490970168402857E-4]:4.342561923179E0)[&rate=6.433413636822148E-4]:3.973269030195E0,20[&rate=7.847830189368318E-4]:8.315830953374E0)[&rate=0.0012473785453450718]:2.6259770499E1)[&rate=0.001460710684532219]:3.408543180568E1)[&rate=6.642734498417009E-4]:1.726684669926E0,(((30[&rate=8.458054386742958E-4]:4.826904652172E1,26[&rate=4.97235949286714E-4]:4.826904652172E1)[&rate=9.670165291383372E-4]:1.162100987439E1,32[&rate=3.5519391623544007E-4]:5.989005639611E1)[&rate=4.3490970168402857E-4]:6.809317648283E0,((((4[&rate=6.331200958149107E-4]:1.729150386756E0,3[&rate=5.934623935799287E-4]:1.729150386756E0)[&rate=3.855580804120216E-4]:5.12065800282E-1,2[&rate=4.6709171425443104E-4]:2.241216187038E0)[&rate=6.433413636822148E-4]:6.647920928092E0,5[&rate=4.7730814643396225E-4]:8.88913711513E0)[&rate=0.0011840430001405424]:1.60344407576E0,((7[&rate=5.741447890487345E-4]:7.105263773143E0,1[&rate=3.371589737377878E-4]:7.105263773143E0)[&rate=4.97235949286714E-4]:1.235211851142E0,6[&rate=5.934623935799287E-4]:8.340475624284E0)[&rate=5.934623935799287E-4]:2.152105566606E0)[&rate=7.204240634995306E-4]:5.62067928535E1)[&rate=6.230381645161542E-4]:3.688343883591E0)[&rate=4.6709171425443104E-4]:1.539851173948E0)[&rate=5.358995544791864E-4]:2.808215075386E0,((((11[&rate=5.64558952461444E-4]:1.509452024524E1,29[&rate=6.537196175354604E-4]:1.509452024524E1)[&rate=9.00390345999569E-4]:5.560359041712E1,(33[&rate=8.811181484187512E-4]:6.288030703241E1,13[&rate=4.3490970168402857E-4]:6.288030703241E1)[&rate=5.64558952461444E-4]:7.817803629949E0)[&rate=6.971935726134221E-4]:9.267914621046E-1,(19[&rate=7.990645917452891E-4]:1.225100757866E1,18[&rate=8.139448967919283E-4]:1.225100757866E1)[&rate=3.855580804120216E-4]:5.937389454581E1)[&rate=5.64558952461444E-4]:1.436328272283E0,((10[&rate=6.130786952421026E-4]:2.287285459063E1,31[&rate=4.115211351431631E-4]:2.287285459063E1)[&rate=2.8791798038073607E-4]:4.870936240151E1,23[&rate=5.070120935988487E-4]:7.158221699214E1)[&rate=6.537196175354604E-4]:1.479013404604E0)[&rate=8.458054386742958E-4]:1.674553780571E0)[&rate=8.294967230975612E-4]:1.888770517387E0,(17[&rate=7.710375350690039E-4]:6.71824610561E1,(27[&rate=5.358995544791864E-4]:2.654947947658E1,28[&rate=0.0010541949257423103]:2.654947947658E1)[&rate=7.710375350690039E-4]:4.063298157952E1)[&rate=9.209696802012094E-4]:9.44209363861E0)[&rate=0.0010541949257423103]:4.600285406691E1); +tree STATE_870000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.2057170475,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.2057170475,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.493417010500502E-4]:7.791353937659E0,9[&rate=0.001557620367623235]:7.791353937659E0)[&rate=4.614410768772295E-4]:6.369841425831E0,15[&rate=4.614410768772295E-4]:1.416119536349E1)[&rate=8.69492073058587E-4]:8.978410078825E1,(14[&rate=0.0012449540722595464]:4.284743901432E1,24[&rate=0.0012449540722595464]:4.284743901432E1)[&rate=0.0011880782445117311]:6.109785713742E1)[&rate=7.877293121546733E-4]:1.804246022327E1,(((25[&rate=6.274991794316059E-4]:7.353898119445E1,((((16[&rate=5.343145826798609E-4]:3.404258146905E1,((22[&rate=5.853947012549252E-4]:4.493473487512E0,21[&rate=3.0383899693477026E-4]:4.493473487512E0)[&rate=3.7602845849495244E-4]:3.6116140851E0,20[&rate=9.521784746829063E-4]:8.105087572612E0)[&rate=0.0010998313561239293]:2.593749389644E1)[&rate=0.0011880782445117311]:3.162949772349E1,((30[&rate=8.183188072976597E-4]:4.732596507844E1,26[&rate=5.139131596308786E-4]:4.732596507844E1)[&rate=7.074973499036084E-4]:1.290945112786E1,32[&rate=4.3918672161076533E-4]:6.02354162063E1)[&rate=5.546593802832314E-4]:5.436662986241E0)[&rate=9.76592057479047E-4]:3.914196259611E0,12[&rate=9.76592057479047E-4]:6.958627545215E1)[&rate=4.1560395954885456E-4]:5.986178841108E-1,((((4[&rate=8.345889885042045E-4]:2.248700960113E0,3[&rate=5.75097339214739E-4]:2.248700960113E0)[&rate=4.275978487294785E-4]:1.535232386654E-1,2[&rate=6.719091981385685E-4]:2.402224198778E0)[&rate=6.383396227698032E-4]:6.409881579153E0,5[&rate=8.027223624033441E-4]:8.812105777932E0)[&rate=5.036388536750526E-4]:1.55689301517E0,((7[&rate=2.7535994841271927E-4]:6.901638922428E0,1[&rate=4.7221812779165584E-4]:6.901638922428E0)[&rate=5.036388536750526E-4]:1.222218415549E0,6[&rate=5.75097339214739E-4]:8.123857337977E0)[&rate=8.883349468360984E-4]:2.245141455124E0)[&rate=6.274991794316059E-4]:5.981589454316E1)[&rate=4.932836967294983E-4]:3.354087858187E0)[&rate=0.0010998313561239293]:6.278441597535E-1,((((11[&rate=7.877293121546733E-4]:1.602897494916E1,29[&rate=4.614410768772295E-4]:1.602897494916E1)[&rate=8.516147254041381E-4]:5.055666762737E1,(33[&rate=9.08279963924997E-4]:6.052400809282E1,13[&rate=4.7221812779165584E-4]:6.052400809282E1)[&rate=5.853947012549252E-4]:6.061634483709E0)[&rate=5.343145826798609E-4]:2.60459457382E0,(19[&rate=6.719091981385685E-4]:1.203616954534E1,18[&rate=8.345889885042045E-4]:1.203616954534E1)[&rate=3.8997457354453306E-4]:5.715406760501E1)[&rate=7.877293121546733E-4]:1.920803775918E0,((10[&rate=5.343145826798609E-4]:2.327032116691E1,31[&rate=7.199231328859089E-4]:2.327032116691E1)[&rate=6.493417010500502E-4]:4.723501333558E1,23[&rate=3.610084319417902E-4]:7.050533450249E1)[&rate=3.610084319417902E-4]:6.057064237805E-1)[&rate=5.957667485360641E-4]:3.055784427929E0)[&rate=6.605247489599863E-4]:4.127531265988E0,(17[&rate=9.08279963924997E-4]:7.0424888936E1,(27[&rate=7.593171038305255E-4]:2.589367306633E1,28[&rate=0.001032007165044626]:2.589367306633E1)[&rate=9.08279963924997E-4]:4.453121586967E1)[&rate=5.648578991723382E-4]:7.869467684191E0)[&rate=0.001878877617909416]:4.369339975483E1); +tree STATE_880000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.2893569044,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.2893569044,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.270090291259403E-4]:7.941519732116E0,9[&rate=9.155039759249634E-4]:7.941519732116E0)[&rate=9.364113248952236E-4]:4.921240571048E0,15[&rate=4.261570870151035E-4]:1.286276030316E1)[&rate=8.113029292636956E-4]:8.546136854801E1,(14[&rate=0.0011904928044248774]:4.223426883494E1,24[&rate=8.772471832823891E-4]:4.223426883494E1)[&rate=0.0011904928044248774]:5.608986001624E1)[&rate=3.7132081168030464E-4]:2.156134360977E1,(((25[&rate=5.448701569952396E-4]:7.134917266126E1,((((16[&rate=5.753147644919901E-4]:3.34271393523E1,((22[&rate=3.7132081168030464E-4]:3.526015923613E0,21[&rate=6.376426894487895E-4]:3.526015923613E0)[&rate=0.0015515394805247365]:4.657933900208E0,20[&rate=5.65153320656936E-4]:8.183949823821E0)[&rate=0.0011904928044248774]:2.524318952848E1)[&rate=0.0012462050189168722]:3.120664585439E1,((30[&rate=5.245135121636123E-4]:4.902735740842E1,26[&rate=6.593431285078622E-4]:4.902735740842E1)[&rate=8.427900219674739E-4]:8.334324135003E0,32[&rate=4.828539974301973E-4]:5.736168154343E1)[&rate=4.3818192823472546E-4]:7.27210366326E0)[&rate=5.550111706170533E-4]:2.716383165304E0,((((4[&rate=0.0011904928044248774]:1.768176476935E0,3[&rate=6.593431285078622E-4]:1.768176476935E0)[&rate=5.142550847772849E-4]:3.882383767805E-1,2[&rate=7.17043834558453E-4]:2.156414853716E0)[&rate=0.0010687481350648831]:6.370793268794E0,5[&rate=6.817470149437643E-4]:8.52720812251E0)[&rate=5.142550847772849E-4]:1.555505549442E0,((7[&rate=6.484146534548034E-4]:6.124585522737E0,1[&rate=3.359456067745097E-4]:6.124585522737E0)[&rate=5.957647708950377E-4]:1.488245071772E0,6[&rate=7.683702587208019E-4]:7.61283059451E0)[&rate=4.004357364829392E-4]:2.469883077442E0)[&rate=5.448701569952396E-4]:5.726745470004E1)[&rate=8.958366293917528E-4]:3.755993278507E0,12[&rate=7.964790221197489E-4]:7.11061616505E1)[&rate=5.753147644919901E-4]:2.430110107672E-1)[&rate=9.587582599168864E-4]:9.923576018623E-1,((((11[&rate=8.113029292636956E-4]:1.420240423079E1,29[&rate=8.113029292636956E-4]:1.420240423079E1)[&rate=9.587582599168864E-4]:4.935500226586E1,(33[&rate=6.060869659913458E-4]:5.790162818891E1,13[&rate=4.828539974301973E-4]:5.790162818891E1)[&rate=8.427900219674739E-4]:5.655778307745E0)[&rate=6.704472001384275E-4]:2.536970717882E0,(19[&rate=0.0012462050189168722]:1.132596272287E1,18[&rate=4.93454654492918E-4]:1.132596272287E1)[&rate=4.828539974301973E-4]:5.476841449166E1)[&rate=4.720732681101115E-4]:4.288678075236E0,((10[&rate=9.155039759249634E-4]:2.253519222152E1,31[&rate=6.060869659913458E-4]:2.253519222152E1)[&rate=3.864241375900252E-4]:4.579037120023E1,23[&rate=5.855129318989951E-4]:6.832556342175E1)[&rate=4.720732681101115E-4]:2.057491868019E0)[&rate=2.8491363577103605E-4]:1.958474973354E0)[&rate=9.827945048235228E-4]:4.694909437075E0,(17[&rate=8.267169801273233E-4]:6.598724475902E1,(27[&rate=6.593431285078622E-4]:2.811083580633E1,28[&rate=7.293586221831401E-4]:2.811083580633E1)[&rate=8.772471832823891E-4]:3.787640895269E1)[&rate=4.720732681101115E-4]:1.104919494118E1)[&rate=0.0015515394805247365]:4.284903276074E1); +tree STATE_890000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55155.251432595986,EEF_ucld_branchRates=-266.168517335019,lnP=-55155.251432595986,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.2889524125691884E-4]:9.966285226242E0,9[&rate=8.060698961176745E-4]:9.966285226242E0)[&rate=3.454268860857848E-4]:4.393361858234E0,15[&rate=4.73735411169531E-4]:1.435964708448E1)[&rate=0.001007646336840171]:9.984393819121E1,(14[&rate=0.0011938738313120821]:4.51937544206E1,24[&rate=8.381280558770989E-4]:4.51937544206E1)[&rate=9.336152406331877E-4]:6.900983085509E1)[&rate=7.624074498087509E-4]:1.382796919186E1,(((25[&rate=5.771496034135573E-4]:7.873049603687E1,(((((((4[&rate=4.6290452418879777E-4]:1.743144264124E0,3[&rate=6.744955273107764E-4]:1.743144264124E0)[&rate=9.122702431591241E-4]:8.668466776283E-1,2[&rate=5.463736276724504E-4]:2.609990941752E0)[&rate=0.001251132254463214]:6.847873308336E0,5[&rate=3.9109306588456654E-4]:9.457864250088E0)[&rate=7.356134729295236E-4]:2.522005867896E0,((7[&rate=8.552570328576166E-4]:7.692595680257E0,6[&rate=3.9109306588456654E-4]:7.692595680257E0)[&rate=5.979307182563579E-4]:6.338877782184E-1,1[&rate=0.0010689809086246761]:8.326483458476E0)[&rate=8.381280558770989E-4]:3.653386659508E0)[&rate=8.732434468405376E-4]:5.895308231556E1,((30[&rate=5.979307182563579E-4]:5.180116358097E1,26[&rate=5.875024515519181E-4]:5.180116358097E1)[&rate=6.980908275306392E-4]:9.905466208501E0,32[&rate=5.053155976943182E-4]:6.170662978947E1)[&rate=9.56442745242499E-4]:9.226322644068E0)[&rate=5.566025098128166E-4]:4.177885925914E0,(16[&rate=4.84391113585074E-4]:3.590865696183E1,((22[&rate=0.0015659806923635875]:4.195019440328E0,21[&rate=5.361504266841202E-4]:4.195019440328E0)[&rate=9.56442745242499E-4]:4.04617438565E0,20[&rate=4.0428665774465584E-4]:8.241193825978E0)[&rate=0.0011938738313120821]:2.766746313585E1)[&rate=0.0011938738313120821]:3.920218139763E1)[&rate=2.2871239947086185E-4]:8.947128614426E-1,12[&rate=8.060698961176745E-4]:7.60055512209E1)[&rate=8.060698961176745E-4]:2.724944815968E0)[&rate=0.0011938738313120821]:1.269036028869E0,((((11[&rate=6.630468917428986E-4]:2.071121670816E1,29[&rate=6.190809300122877E-4]:2.071121670816E1)[&rate=8.922019967338077E-4]:5.123700488417E1,(33[&rate=5.463736276724504E-4]:6.568529269011E1,13[&rate=4.73735411169531E-4]:6.568529269011E1)[&rate=7.909875163297657E-4]:6.262928902223E0)[&rate=6.298371507540307E-4]:1.797583625918E0,(19[&rate=5.463736276724504E-4]:1.184201483627E1,18[&rate=5.053155976943182E-4]:1.184201483627E1)[&rate=4.2889524125691884E-4]:6.190379038198E1)[&rate=4.949074857696984E-4]:3.146609559497E0,((10[&rate=4.518563404766492E-4]:2.964778732308E1,31[&rate=6.407377087640634E-4]:2.964778732308E1)[&rate=5.668553197494677E-4]:4.501853792215E1,23[&rate=3.9109306588456654E-4]:7.466632524523E1)[&rate=6.518011382342693E-4]:2.226089532517E0)[&rate=6.630468917428986E-4]:3.107117287984E0)[&rate=4.73735411169531E-4]:4.975424921658E0,(17[&rate=8.217598028144925E-4]:7.464515799391E1,(27[&rate=4.73735411169531E-4]:2.598745928262E1,28[&rate=9.336152406331877E-4]:2.598745928262E1)[&rate=6.630468917428986E-4]:4.86576987113E1)[&rate=0.0011938738313120821]:1.032979899348E1)[&rate=0.0015659806923635875]:4.305659748016E1); +tree STATE_900000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55155.36234602079,EEF_ucld_branchRates=-266.168517335019,lnP=-55155.36234602079,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.049666665182061E-4]:9.278448992417E0,9[&rate=8.934233766363596E-4]:9.278448992417E0)[&rate=8.266677679055688E-4]:4.920977449085E0,15[&rate=0.001073364100857409]:1.41994264415E1)[&rate=8.75759042599956E-4]:7.976824171801E1,(14[&rate=0.0014629415094095342]:3.910888021334E1,24[&rate=0.001103568283713797]:3.910888021334E1)[&rate=0.0012610177488670163]:5.485878794617E1)[&rate=9.118643236653933E-4]:1.973765341028E1,(((25[&rate=5.853831324246747E-4]:7.24586227957E1,(((16[&rate=6.54415634163393E-4]:3.222504429694E1,((22[&rate=0.0017424082294885776]:2.277856145137E0,21[&rate=3.986631944796044E-4]:2.277856145137E0)[&rate=0.0013809180914922145]:4.795324045416E0,20[&rate=4.808284927726108E-4]:7.073180190554E0)[&rate=0.0015732346132823077]:2.515186410639E1)[&rate=0.0010196932944804428]:3.671154925888E1,(((((4[&rate=5.167372286433116E-4]:2.543116060115E0,2[&rate=5.967394599323283E-4]:2.543116060115E0)[&rate=9.311761671013844E-4]:8.434035610724E-2,3[&rate=6.081298722127395E-4]:2.627456416222E0)[&rate=7.965919008582367E-4]:6.707147148141E0,5[&rate=5.167372286433116E-4]:9.334603564363E0)[&rate=6.310902276525526E-4]:1.74616261921E0,((7[&rate=7.681988904520669E-4]:7.168819355912E0,1[&rate=0.0012610177488670163]:7.168819355912E0)[&rate=0.0011732270529503728]:1.314883566E0,6[&rate=5.283630000816983E-4]:8.483702921912E0)[&rate=9.955535630205388E-4]:2.597063261661E0)[&rate=7.281372241599807E-4]:5.710703757132E1,((30[&rate=7.153384287130509E-4]:4.681627228624E1,26[&rate=3.64048647893059E-4]:4.681627228624E1)[&rate=8.587903139205893E-4]:1.148312987043E1,32[&rate=4.2849452098345816E-4]:5.829940215667E1)[&rate=4.930123271183738E-4]:9.888401598223E0)[&rate=3.986631944796044E-4]:7.487898009341E-1)[&rate=0.0010196932944804428]:2.363350556774E0,12[&rate=7.281372241599807E-4]:7.12999441126E1)[&rate=4.5554169277773634E-4]:1.158678683099E0)[&rate=6.54415634163393E-4]:2.567685641726E0,((((11[&rate=4.2849452098345816E-4]:1.910081382064E1,29[&rate=5.853831324246747E-4]:1.910081382064E1)[&rate=7.153384287130509E-4]:5.038579876767E1,(33[&rate=9.118643236653933E-4]:6.067904931313E1,13[&rate=4.5554169277773634E-4]:6.067904931313E1)[&rate=7.02774160984527E-4]:8.807563275182E0)[&rate=0.001315506287664338]:5.83933202369E-1,(19[&rate=8.934233766363596E-4]:1.314186440451E1,18[&rate=9.955535630205388E-4]:1.314186440451E1)[&rate=5.967394599323283E-4]:5.692868138617E1)[&rate=6.782575463847074E-4]:3.147599301812E0,((10[&rate=5.049666665182061E-4]:2.553492997595E1,31[&rate=5.049666665182061E-4]:2.553492997595E1)[&rate=4.930123271183738E-4]:4.660652643189E1,23[&rate=5.626910792859424E-4]:7.214145640784E1)[&rate=6.310902276525526E-4]:1.076688684652E0)[&rate=8.42446993727906E-4]:1.808163344933E0)[&rate=2.375013286622382E-4]:7.188104312662E0,(17[&rate=9.728762244955605E-4]:7.517075829581E1,(27[&rate=6.426979144370994E-4]:2.538841208885E1,28[&rate=9.728762244955605E-4]:2.538841208885E1)[&rate=7.02774160984527E-4]:4.978234620696E1)[&rate=5.398778252923961E-4]:7.043654454278E0)[&rate=0.0013809180914922145]:3.14909088197E1); +tree STATE_910000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.968391203874,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.968391203874,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.6620877109873176E-4]:1.065316195241E1,9[&rate=3.9248977365750285E-4]:1.065316195241E1)[&rate=7.122217956367653E-4]:4.41636372233E0,15[&rate=7.58603921192177E-4]:1.506952567474E1)[&rate=7.757105724939267E-4]:1.008788501231E2,(14[&rate=0.00116754096628117]:4.506741360646E1,24[&rate=7.757105724939267E-4]:4.506741360646E1)[&rate=0.0010060501255807345]:7.088096219141E1)[&rate=4.206989052048068E-4]:1.327005185815E1,(((25[&rate=5.599336829808822E-4]:7.701135214282E1,((((30[&rate=8.801685844439893E-4]:5.210644779827E1,26[&rate=5.40356476094704E-4]:5.210644779827E1)[&rate=5.69967210099984E-4]:7.980022569476E0,32[&rate=3.827683671838401E-4]:6.008647036775E1)[&rate=2.8962122600787517E-4]:1.052941888583E1,(12[&rate=6.714945456435572E-4]:6.652404833493E1,(16[&rate=4.7527391130743497E-4]:2.975402765597E1,((22[&rate=5.69967210099984E-4]:3.302727637011E0,21[&rate=3.6259399025384266E-4]:3.302727637011E0)[&rate=4.0202859886808047E-4]:5.340786517118E0,20[&rate=4.2988844752163104E-4]:8.643514154128E0)[&rate=0.0010060501255807345]:2.111051350184E1)[&rate=0.0011019352536023866]:3.677002067896E1)[&rate=4.8436665379179324E-4]:4.09184091865E0)[&rate=5.69967210099984E-4]:2.561737740664E0,((((4[&rate=4.11421283203048E-4]:2.239110944747E0,2[&rate=7.269563889940388E-4]:2.239110944747E0)[&rate=3.294707391416771E-4]:3.839203595214E-1,3[&rate=7.269563889940388E-4]:2.623031304268E0)[&rate=9.358563579790692E-4]:8.134540261231E0,5[&rate=4.935025083475585E-4]:1.07575715655E1)[&rate=4.11421283203048E-4]:1.237435040997E0,((7[&rate=3.5202144694948534E-4]:7.783759944073E0,6[&rate=7.938336725998552E-4]:7.783759944073E0)[&rate=4.2988844752163104E-4]:5.455708623035E-1,1[&rate=3.410179739749763E-4]:8.329330806377E0)[&rate=8.131265081268483E-4]:3.665675800119E0)[&rate=5.119639862389427E-4]:6.118262038775E1)[&rate=6.845513403308223E-4]:3.833725148578E0)[&rate=0.001690719015487785]:1.617981398433E0,((((11[&rate=3.172245905196809E-4]:1.598081606986E1,29[&rate=5.026966251445938E-4]:1.598081606986E1)[&rate=7.122217956367653E-4]:5.849457966789E1,(33[&rate=6.348636994287061E-4]:6.342549908624E1,13[&rate=3.9248977365750285E-4]:6.342549908624E1)[&rate=5.213195817914506E-4]:1.104989665151E1)[&rate=5.801884376963406E-4]:1.082697942566E0,(19[&rate=0.0010496225259700445]:1.597140251541E1,18[&rate=5.026966251445938E-4]:1.597140251541E1)[&rate=6.588889566018876E-4]:5.958669116491E1)[&rate=6.98108376337816E-4]:1.567827527474E0,((10[&rate=6.233716583741737E-4]:2.290182891667E1,31[&rate=7.122217956367653E-4]:2.290182891667E1)[&rate=3.410179739749763E-4]:5.334632312149E1,23[&rate=5.69967210099984E-4]:7.624815203816E1)[&rate=4.6620877109873176E-4]:8.777691696271E-1)[&rate=4.0202859886808047E-4]:1.503412333469E0)[&rate=2.2941334028975973E-4]:6.193343812733E0,(17[&rate=8.337779881803569E-4]:7.778692294697E1,(27[&rate=5.119639862389427E-4]:3.200009766253E1,28[&rate=0.00116754096628117]:3.200009766253E1)[&rate=4.0202859886808047E-4]:4.578682528445E1)[&rate=8.560247103508053E-4]:7.035754407015E0)[&rate=0.001255771056668636]:4.439575030204E1); +tree STATE_920000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55148.50401538313,EEF_ucld_branchRates=-266.168517335019,lnP=-55148.50401538313,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.264008828754569E-4]:9.28643606785E0,9[&rate=7.560626583127529E-4]:9.28643606785E0)[&rate=2.484443268840059E-4]:4.53998737939E0,15[&rate=3.997274584188984E-4]:1.382642344724E1)[&rate=6.101984194927713E-4]:1.032734742054E2,(14[&rate=0.0011464966730399312]:4.849907047485E1,24[&rate=8.287451790714935E-4]:4.849907047485E1)[&rate=8.287451790714935E-4]:6.860082717782E1)[&rate=3.050967120724908E-4]:6.129795845489E0,(((25[&rate=4.774588259924199E-4]:7.575060779903E1,((((30[&rate=3.997274584188984E-4]:5.077521995253E1,26[&rate=5.137478197233709E-4]:5.077521995253E1)[&rate=7.142956241124897E-4]:8.719855807552E0,32[&rate=2.720304746027499E-4]:5.949507576008E1)[&rate=3.681338298879043E-4]:1.140730504611E1,((((4[&rate=9.941434182057997E-4]:1.891798806422E0,2[&rate=2.720304746027499E-4]:1.891798806422E0)[&rate=3.368105399648728E-4]:9.82518376564E-1,3[&rate=4.21207648371134E-4]:2.874317182986E0)[&rate=2.8328470546368776E-4]:8.218198311758E0,5[&rate=3.2632142268473294E-4]:1.109251549474E1)[&rate=0.0023346673539074757]:7.203529674326E-1,((7[&rate=7.142956241124897E-4]:7.651704168851E0,6[&rate=6.258254652707078E-4]:7.651704168851E0)[&rate=3.1576149979179396E-4]:8.781887217939E-1,1[&rate=7.142956241124897E-4]:8.529892890644E0)[&rate=4.658409906268538E-4]:3.282975571532E0)[&rate=5.264008828754569E-4]:5.908951234401E1)[&rate=0.0014058595119258023]:1.511619154902E0,((16[&rate=2.6044963062934735E-4]:2.995298538716E1,((22[&rate=0.0014058595119258023]:3.104487420774E0,21[&rate=4.431956839588754E-4]:3.104487420774E0)[&rate=7.142956241124897E-4]:3.963689464084E0,20[&rate=2.082244852396709E-4]:7.068176884857E0)[&rate=0.0012150606457854854]:2.28848085023E1)[&rate=8.029359945384383E-4]:3.997181636471E1,12[&rate=8.029359945384383E-4]:6.992480175187E1)[&rate=3.2632142268473294E-4]:2.489198209224E0)[&rate=7.142956241124897E-4]:3.336607837939E0)[&rate=5.264008828754569E-4]:2.341872317242E0,((((11[&rate=4.1041327878044E-4]:1.652801984428E1,29[&rate=9.546484531703352E-4]:1.652801984428E1)[&rate=4.658409906268538E-4]:5.318283559356E1,(33[&rate=6.589389765393048E-4]:6.402808645129E1,13[&rate=2.9428710219800495E-4]:6.402808645129E1)[&rate=9.546484531703352E-4]:5.682768986549E0)[&rate=5.264008828754569E-4]:2.091740126528E0,(19[&rate=3.2632142268473294E-4]:1.75839362648E1,18[&rate=5.951176803168488E-4]:1.75839362648E1)[&rate=4.431956839588754E-4]:5.421865929957E1)[&rate=2.082244852396709E-4]:3.180218586179E0,((10[&rate=5.393756492666526E-4]:2.710136631095E1,31[&rate=7.560626583127529E-4]:2.710136631095E1)[&rate=3.2632142268473294E-4]:4.637339891874E1,23[&rate=4.431956839588754E-4]:7.347476522969E1)[&rate=4.321289574893582E-4]:1.508048920859E0)[&rate=3.4725850601340774E-4]:3.109665965725E0)[&rate=0.0011464966730399312]:2.394429794036E0,(17[&rate=8.863986243597007E-4]:7.249838631875E1,(27[&rate=1.5131405641961358E-4]:3.026491490702E1,28[&rate=0.0011464966730399312]:3.026491490702E1)[&rate=6.76554237598349E-4]:4.223347141173E1)[&rate=3.4725850601340774E-4]:7.98852359156E0)[&rate=0.0017872583174147808]:4.274278358785E1); +tree STATE_930000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55131.59860775896,EEF_ucld_branchRates=-266.168517335019,lnP=-55131.59860775896,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.306012800252581E-4]:7.213687636348E0,9[&rate=5.861174742267083E-4]:7.213687636348E0)[&rate=7.606574067669981E-4]:8.874903099499E0,15[&rate=9.157114070895015E-4]:1.608859073585E1)[&rate=8.306012800252581E-4]:9.495614236845E1,(14[&rate=0.001190711584254777]:4.884553192923E1,24[&rate=6.342727343788983E-4]:4.884553192923E1)[&rate=0.001060968202744154]:6.219920117507E1)[&rate=3.841891764680352E-4]:3.998606964009E0,(((25[&rate=6.59794083153021E-4]:7.151634401412E1,((((30[&rate=9.669224981676951E-4]:5.089480182972E1,26[&rate=5.406686659087487E-4]:5.089480182972E1)[&rate=0.0015224380449208466]:7.426678184291E0,32[&rate=4.529977803298421E-4]:5.832148001401E1)[&rate=3.5893224441887523E-4]:9.856239952788E0,((((4[&rate=0.0014043336010761054]:1.947678100918E0,2[&rate=9.669224981676951E-4]:1.947678100918E0)[&rate=5.518450634211008E-4]:1.704710261733E0,3[&rate=3.454853862208925E-4]:3.652388362651E0)[&rate=8.119608544227841E-4]:6.001604931763E0,5[&rate=3.71791945750637E-4]:9.653993294414E0)[&rate=7.941454243253212E-4]:2.928684272001E0,((7[&rate=5.076246849850297E-4]:7.034129667086E0,6[&rate=7.606574067669981E-4]:7.034129667086E0)[&rate=5.518450634211008E-4]:8.883568549422E-1,1[&rate=5.185769953314012E-4]:7.922486522028E0)[&rate=4.1945386011925194E-4]:4.660191044387E0)[&rate=6.219082282704042E-4]:5.559504240038E1)[&rate=2.590971985978672E-4]:1.773093243095E0,((16[&rate=4.307682850992932E-4]:3.221173663642E1,((22[&rate=4.4193785483551004E-4]:3.239986683506E0,21[&rate=2.3130458582499395E-4]:3.239986683506E0)[&rate=0.0011417543207619218]:3.021653860288E0,20[&rate=4.307682850992932E-4]:6.261640543794E0)[&rate=0.0011417543207619218]:2.595009609262E1)[&rate=0.001248006779432821]:3.411408777783E1,12[&rate=7.148010530934151E-4]:6.632582441425E1)[&rate=5.518450634211008E-4]:3.624988795645E0)[&rate=0.0014043336010761054]:1.565530804222E0)[&rate=4.1945386011925194E-4]:3.561942729801E0,((((11[&rate=8.925676498670243E-4]:1.721635169221E1,29[&rate=4.529977803298421E-4]:1.721635169221E1)[&rate=8.119608544227841E-4]:5.155764303879E1,(33[&rate=7.004730070518115E-4]:6.089475784864E1,13[&rate=4.307682850992932E-4]:6.089475784864E1)[&rate=5.185769953314012E-4]:7.879236882358E0)[&rate=8.707756408664671E-4]:7.74640690559E-1,(19[&rate=6.219082282704042E-4]:1.64795486297E1,18[&rate=6.219082282704042E-4]:1.64795486297E1)[&rate=3.1607154622755664E-4]:5.306908679186E1)[&rate=5.295854361210119E-4]:3.850465859863E0,((10[&rate=5.861174742267083E-4]:2.504509479919E1,31[&rate=9.955605926304564E-4]:2.504509479919E1)[&rate=3.71791945750637E-4]:4.723820137262E1,23[&rate=4.529977803298421E-4]:7.228329617181E1)[&rate=8.925676498670243E-4]:1.115805109616E0)[&rate=4.4193785483551004E-4]:1.679185462494E0)[&rate=6.342727343788983E-4]:1.598540437058E0,(17[&rate=7.606574067669981E-4]:6.754671067246E1,(27[&rate=8.306012800252581E-4]:2.395586593991E1,28[&rate=8.306012800252581E-4]:2.395586593991E1)[&rate=5.861174742267083E-4]:4.359084473256E1)[&rate=4.1945386011925194E-4]:9.130116508509E0)[&rate=0.001705367972151901]:3.836651288734E1); +tree STATE_940000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55150.93944885596,EEF_ucld_branchRates=-266.168517335019,lnP=-55150.93944885596,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.873273932550877E-4]:9.708663436499E0,9[&rate=9.008253979061525E-4]:9.708663436499E0)[&rate=3.9975668380656066E-4]:6.003311183336E0,15[&rate=3.3206066220827917E-4]:1.571197461984E1)[&rate=6.138146188843057E-4]:1.070978114372E2,(14[&rate=6.877039636816755E-4]:5.154033312786E1,24[&rate=6.138146188843057E-4]:5.154033312786E1)[&rate=0.0011210012916617552]:7.126945292922E1)[&rate=4.5234433685510656E-4]:2.941074454672E0,(((25[&rate=7.839475477444945E-4]:7.571184350205E1,(12[&rate=8.036276598642631E-4]:7.534523163012E1,((16[&rate=4.6103845011486784E-4]:4.016437465265E1,((22[&rate=0.0010587099465075136]:2.81099937445E0,21[&rate=3.3206066220827917E-4]:2.81099937445E0)[&rate=8.036276598642631E-4]:5.260264294374E0,20[&rate=5.421462346081188E-4]:8.071263668824E0)[&rate=8.248217535640437E-4]:3.209311098382E1)[&rate=9.320305140210363E-4]:3.133882025801E1,(((30[&rate=7.482768651030236E-4]:4.929772112286E1,26[&rate=5.615295537268592E-4]:4.929772112286E1)[&rate=6.742305397386766E-4]:8.643102931871E0,32[&rate=4.7851527130162255E-4]:5.794082405473E1)[&rate=6.488150350328175E-4]:9.571572610037E0,((((4[&rate=6.742305397386766E-4]:2.39844242938E0,2[&rate=5.327033567110465E-4]:2.39844242938E0)[&rate=2.9645766313568224E-4]:1.317990774785E0,3[&rate=3.7222297477077664E-4]:3.716433204165E0)[&rate=3.7222297477077664E-4]:7.995195219693E0,5[&rate=2.4829903990008226E-4]:1.171162842386E1)[&rate=5.517490652295574E-4]:1.5699179315E0,((7[&rate=4.697571329411946E-4]:7.738797344179E0,6[&rate=9.675918635446669E-4]:7.738797344179E0)[&rate=4.5234433685510656E-4]:8.166876504336E-1,1[&rate=3.9073337637363776E-4]:8.555484994612E0)[&rate=7.017671401929575E-4]:4.726061360746E0)[&rate=5.234036998164088E-4]:5.423085030941E1)[&rate=6.612853390459706E-4]:3.990798245896E0)[&rate=7.319616538474341E-4]:3.842036719463E0)[&rate=9.675918635446669E-4]:3.666118719256E-1)[&rate=3.9975668380656066E-4]:2.67243356492E0,((((33[&rate=7.017671401929575E-4]:6.486358681279E1,13[&rate=3.9975668380656066E-4]:6.486358681279E1)[&rate=2.2440142059107558E-4]:7.287571064045E0,(11[&rate=7.017671401929575E-4]:1.905239138394E1,29[&rate=6.367730411880719E-4]:1.905239138394E1)[&rate=7.319616538474341E-4]:5.30987664929E1)[&rate=3.9975668380656066E-4]:1.774179316532E0,(19[&rate=3.815672094687722E-4]:1.798877557378E1,18[&rate=3.9073337637363776E-4]:1.798877557378E1)[&rate=3.426507783246423E-4]:5.593656161959E1)[&rate=4.873273932550877E-4]:2.438510649406E0,((10[&rate=3.2094300955043886E-4]:2.530027125165E1,31[&rate=5.142313441114112E-4]:2.530027125165E1)[&rate=5.517490652295574E-4]:4.993550434208E1,23[&rate=4.962078532512775E-4]:7.523577559373E1)[&rate=5.421462346081188E-4]:1.12807224904E0)[&rate=3.7222297477077664E-4]:2.020429224197E0)[&rate=3.9073337637363776E-4]:3.618081316091E0,(17[&rate=7.017671401929575E-4]:7.102925556464E1,(27[&rate=5.421462346081188E-4]:2.382748815014E1,28[&rate=0.0010587099465075136]:2.382748815014E1)[&rate=4.0866714340899413E-4]:4.72017674145E1)[&rate=9.320305140210363E-4]:1.097310281842E1)[&rate=0.0016164728672015346]:4.374850212868E1); +tree STATE_950000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55151.10687253794,EEF_ucld_branchRates=-266.168517335019,lnP=-55151.10687253794,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.733400106445564E-4]:8.011739726933E0,9[&rate=0.0012031754742512144]:8.011739726933E0)[&rate=4.4341920271890185E-4]:5.401419109279E0,15[&rate=2.912720009263897E-4]:1.341315883621E1)[&rate=8.762102824569377E-4]:1.101571143742E2,(14[&rate=7.592943619057822E-4]:5.000563904019E1,24[&rate=6.145540394226147E-4]:5.000563904019E1)[&rate=0.0012031754742512144]:7.356463417023E1)[&rate=8.385815424580827E-4]:5.314572104775E0,(((25[&rate=8.212416702824886E-4]:7.520709755847E1,(12[&rate=8.212416702824886E-4]:7.101134182073E1,(((16[&rate=6.360373908496868E-4]:3.845924306731E1,((22[&rate=7.889523919556517E-4]:2.466796280363E0,21[&rate=7.059369822834136E-4]:2.466796280363E0)[&rate=0.0010273685195108986]:4.287915904644E0,20[&rate=7.452860288838153E-4]:6.754712185007E0)[&rate=0.0010273685195108986]:3.170453088231E1)[&rate=8.967933417228087E-4]:2.816679845315E1,((((4[&rate=4.327948505180505E-4]:1.540744983411E0,2[&rate=0.0013652372604493594]:1.540744983411E0)[&rate=7.592943619057822E-4]:1.290149201999E0,3[&rate=0.001062165923898783]:2.83089418541E0)[&rate=5.434282551894182E-4]:1.013652592077E1,5[&rate=3.464199625619159E-4]:1.296742010618E1)[&rate=9.188080406094449E-4]:1.836779751744E0,((7[&rate=4.538355649916614E-4]:8.360756423443E0,6[&rate=6.470633387487818E-4]:8.360756423443E0)[&rate=5.23717030628618E-4]:9.881404052304E-1,1[&rate=4.6408436405271465E-4]:9.348896828673E0)[&rate=4.327948505180505E-4]:5.455303029254E0)[&rate=4.4341920271890185E-4]:5.182184166253E1)[&rate=4.10717893345381E-4]:2.094216823152E0,((30[&rate=6.935769023747324E-4]:4.703366864549E1,26[&rate=6.360373908496868E-4]:4.703366864549E1)[&rate=9.96299927418965E-4]:8.468512931171E0,32[&rate=5.633015390468667E-4]:5.550218157666E1)[&rate=6.360373908496868E-4]:1.321807676695E1)[&rate=8.04729749892991E-4]:2.291083477118E0)[&rate=6.470633387487818E-4]:4.19575573774E0)[&rate=3.991322067246575E-4]:8.967626264101E-1,((((33[&rate=5.937017625625744E-4]:6.108672654358E1,13[&rate=2.912720009263897E-4]:6.108672654358E1)[&rate=5.23717030628618E-4]:9.957573483943E0,(11[&rate=4.6408436405271465E-4]:1.678689256976E1,29[&rate=7.738300549397457E-4]:1.678689256976E1)[&rate=9.188080406094449E-4]:5.425740745776E1)[&rate=8.385815424580827E-4]:1.797820226269E0,(19[&rate=5.434282551894182E-4]:2.093400052822E1,18[&rate=5.335607715414979E-4]:2.093400052822E1)[&rate=4.538355649916614E-4]:5.190811972557E1)[&rate=9.425031462154423E-4]:1.281267765847E0,((10[&rate=3.8706207270168265E-4]:2.569063231015E1,31[&rate=4.6408436405271465E-4]:2.569063231015E1)[&rate=4.941477417023862E-4]:4.608403965209E1,23[&rate=3.743816099190181E-4]:7.177467196224E1)[&rate=7.317532439525805E-4]:2.348716057394E0)[&rate=5.335607715414979E-4]:1.980472165244E0)[&rate=4.327948505180505E-4]:3.688437763967E0,(17[&rate=7.889523919556517E-4]:7.015960936284E1,(27[&rate=6.25207565327436E-4]:2.366037461202E1,28[&rate=0.0012031754742512144]:2.366037461202E1)[&rate=4.4341920271890185E-4]:4.649923475081E1)[&rate=6.040580598898777E-4]:9.632688586008E0)[&rate=0.0018201260923608933]:4.909254736634E1); +tree STATE_960000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55151.445745211764,EEF_ucld_branchRates=-266.168517335019,lnP=-55151.445745211764,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.774342232590835E-4]:8.988923542317E0,9[&rate=8.373455421343137E-4]:8.988923542317E0)[&rate=6.463504582071533E-4]:4.468503778731E0,15[&rate=6.463504582071533E-4]:1.345742732105E1)[&rate=8.541148973501455E-4]:1.038855277245E2,(14[&rate=9.869246501522904E-4]:4.752034035663E1,24[&rate=8.065386909008817E-4]:4.752034035663E1)[&rate=6.858257325000437E-4]:6.982261468888E1)[&rate=5.481961913765828E-4]:8.768621607734E0,((((((16[&rate=6.276599944312392E-4]:3.523638498941E1,((22[&rate=4.486050018685509E-4]:2.620928349658E0,21[&rate=6.858257325000437E-4]:2.620928349658E0)[&rate=8.911568458737203E-4]:5.282936286543E0,20[&rate=4.774342232590835E-4]:7.903864636201E0)[&rate=8.719885686906155E-4]:2.73325203532E1)[&rate=7.409494292422671E-4]:3.409632755135E1,(((30[&rate=5.829139963165887E-4]:4.898918348993E1,26[&rate=5.395475085488427E-4]:4.898918348993E1)[&rate=9.344183315110403E-4]:8.850589635395E0,32[&rate=3.00417596860056E-4]:5.783977312533E1)[&rate=4.8662657052996186E-4]:9.136870589759E0,((((4[&rate=7.922748954783151E-4]:1.371117782799E0,2[&rate=0.0012228735377652884]:1.371117782799E0)[&rate=3.269164031784642E-4]:7.225642472913E-1,3[&rate=5.481961913765828E-4]:2.09368203009E0)[&rate=7.655954906643076E-4]:9.037591677246E0,5[&rate=4.3841885289788447E-4]:1.113127370734E1)[&rate=7.655954906643076E-4]:3.044403369943E0,((7[&rate=7.409494292422671E-4]:8.14737955733E0,6[&rate=4.050739014844379E-4]:8.14737955733E0)[&rate=5.395475085488427E-4]:8.244789712372E-1,1[&rate=4.680604679167222E-4]:8.971858528567E0)[&rate=5.134229476339392E-4]:5.203818548712E0)[&rate=4.5846635249893356E-4]:5.280096663781E1)[&rate=7.786512471845842E-4]:2.356068825672E0)[&rate=0.0010977809926034025]:3.436709673166E-1,12[&rate=8.215281341357371E-4]:6.967638350808E1)[&rate=0.0010545644041249588]:1.754222214377E0,25[&rate=5.916962588212703E-4]:7.143060572245E1)[&rate=9.344183315110403E-4]:8.872322218604E-1,((((11[&rate=6.559293138401229E-4]:1.640814092028E1,29[&rate=6.185149456182869E-4]:1.640814092028E1)[&rate=7.292597518863927E-4]:5.117515950076E1,(33[&rate=8.719885686906155E-4]:6.164624085833E1,13[&rate=5.481961913765828E-4]:6.164624085833E1)[&rate=4.680604679167222E-4]:5.93705956271E0)[&rate=6.185149456182869E-4]:8.219712350736E-1,(19[&rate=6.36933088065641E-4]:2.007437958924E1,18[&rate=6.36933088065641E-4]:2.007437958924E1)[&rate=4.1676195542458795E-4]:4.833089206687E1)[&rate=4.1676195542458795E-4]:2.445279770322E0,((10[&rate=4.486050018685509E-4]:2.825034360383E1,31[&rate=4.680604679167222E-4]:2.825034360383E1)[&rate=4.8662657052996186E-4]:4.194706911367E1,23[&rate=3.7909246409665584E-4]:7.01974127175E1)[&rate=7.786512471845842E-4]:6.531387089299E-1)[&rate=5.741869494399372E-4]:1.467286517883E0)[&rate=9.344183315110403E-4]:2.461575153324E0,(17[&rate=7.655954906643076E-4]:6.455266438274E1,(27[&rate=4.774342232590835E-4]:2.493385230914E1,28[&rate=0.0010977809926034025]:2.493385230914E1)[&rate=7.179364062473948E-4]:3.96188120736E1)[&rate=5.568423819011518E-4]:1.02267487149E1)[&rate=0.0015632853854915813]:5.13321635556E1); +tree STATE_970000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.099267745405,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.099267745405,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.7476312293384374E-4]:7.88093604643E0,9[&rate=8.234165193594261E-4]:7.88093604643E0)[&rate=5.352013119603402E-4]:8.419060470606E0,15[&rate=6.372977251980447E-4]:1.629999651704E1)[&rate=6.253467161905357E-4]:1.042091207751E2,(14[&rate=9.73885482454357E-4]:4.89855926709E1,24[&rate=9.482149789272512E-4]:4.89855926709E1)[&rate=0.001064734294280731]:7.152352462122E1)[&rate=4.132491924722523E-4]:5.70434490875E0,((((((16[&rate=3.325855168234456E-4]:3.745750177655E1,((22[&rate=0.0012445048495680379]:2.958836672565E0,21[&rate=3.622725836475443E-4]:2.958836672565E0)[&rate=9.242715992493518E-4]:6.372058155881E0,20[&rate=4.132491924722523E-4]:9.330894828446E0)[&rate=0.0013106719967786703]:2.81266069481E1)[&rate=0.0015064040769493222]:3.081073652827E1,(((((4[&rate=5.90595985930543E-4]:1.589560546844E0,2[&rate=4.699997112232875E-4]:1.589560546844E0)[&rate=5.681518494903769E-4]:4.812500207561E-1,3[&rate=7.144730001125443E-4]:2.0708105676E0)[&rate=4.36508911777722E-4]:1.029963180313E1,5[&rate=4.918226996298926E-4]:1.237044237073E1)[&rate=5.134975624546192E-4]:2.072299784407E0,((7[&rate=4.0118660237130766E-4]:7.694407531288E0,6[&rate=0.0010317001767666007]:7.694407531288E0)[&rate=7.893879944410368E-4]:1.723325791104E0,1[&rate=3.622725836475443E-4]:9.417733322392E0)[&rate=4.36508911777722E-4]:5.025008832746E0)[&rate=6.618796866868943E-4]:5.004888924425E1,((30[&rate=9.242715992493518E-4]:4.883298375917E1,26[&rate=0.0010015852326454616]:4.883298375917E1)[&rate=0.0011425217012434987]:6.548873195541E0,32[&rate=5.793141077656839E-4]:5.538185695471E1)[&rate=8.415721537341447E-4]:9.109774444683E0)[&rate=8.415721537341447E-4]:3.776606905431E0)[&rate=5.461135876863122E-4]:1.956473890156E0,12[&rate=7.893879944410368E-4]:7.022471219498E1)[&rate=0.0013106719967786703]:9.921957230517E-1,25[&rate=8.415721537341447E-4]:7.121690791803E1)[&rate=5.243356771291592E-4]:1.761640858288E0,((((11[&rate=5.352013119603402E-4]:1.499483092035E1,29[&rate=6.618796866868943E-4]:1.499483092035E1)[&rate=8.606117871277955E-4]:5.244872384198E1,(33[&rate=6.135929792866382E-4]:6.157180157286E1,13[&rate=4.4781673365169156E-4]:6.157180157286E1)[&rate=4.2500303787233875E-4]:5.871753189464E0)[&rate=4.36508911777722E-4]:1.600482693617E0,(19[&rate=8.060491788983889E-4]:1.859677580529E1,18[&rate=3.7581090577740894E-4]:1.859677580529E1)[&rate=7.579087902508236E-4]:5.044726165065E1)[&rate=6.618796866868943E-4]:1.192728606725E0,((10[&rate=7.893879944410368E-4]:2.149611147368E1,31[&rate=5.243356771291592E-4]:2.149611147368E1)[&rate=4.2500303787233875E-4]:4.829561904041E1,23[&rate=4.589683883943232E-4]:6.979173051409E1)[&rate=6.494677012290392E-4]:4.450355485773E-1)[&rate=4.589683883943232E-4]:2.741782713652E0)[&rate=6.494677012290392E-4]:2.653594109466E0,(17[&rate=0.001064734294280731]:6.690994039838E1,(27[&rate=7.144730001125443E-4]:2.796460412504E1,28[&rate=9.73885482454357E-4]:2.796460412504E1)[&rate=8.606117871277955E-4]:3.894533627334E1)[&rate=2.463815763482357E-4]:8.722202487405E0)[&rate=0.0016799319767232016]:5.058131931509E1); +tree STATE_980000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.119257220955,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.119257220955,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.547266681989425E-4]:7.34084682182E0,9[&rate=0.0010207062012086647]:7.34084682182E0)[&rate=3.0899340470244894E-4]:9.447031048621E0,15[&rate=4.471952996959634E-4]:1.678787787044E1)[&rate=7.592740278570702E-4]:1.048314020773E2,(14[&rate=0.0012841743133174613]:5.001753827337E1,24[&rate=5.97678091818498E-4]:5.001753827337E1)[&rate=0.0013623509095942155]:7.16017416744E1)[&rate=0.0010520421100225041]:8.253706756757E0,(((((((11[&rate=9.185111377508126E-4]:1.372114565016E1,29[&rate=8.395138687764451E-4]:1.372114565016E1)[&rate=6.547266681989425E-4]:5.43266173983E1,(33[&rate=5.014300080218119E-4]:6.255919439424E1,13[&rate=4.358799103908743E-4]:6.255919439424E1)[&rate=6.667268513744108E-4]:5.488568654223E0)[&rate=2.58339212793783E-4]:1.063197935527E0,(19[&rate=4.800639532682245E-4]:2.15789197371E1,18[&rate=5.331914384283744E-4]:2.15789197371E1)[&rate=4.2430780960699615E-4]:4.753204124689E1)[&rate=4.471952996959634E-4]:2.840960599351E0,((10[&rate=4.124178391945894E-4]:2.015145157923E1,31[&rate=5.437878543307814E-4]:2.015145157923E1)[&rate=3.873573243855133E-4]:5.0807426001E1,23[&rate=5.437878543307814E-4]:7.095887758023E1)[&rate=9.65764734551548E-4]:9.930440031089E-1)[&rate=4.800639532682245E-4]:1.087570120885E0,25[&rate=7.895052613669154E-4]:7.303949170422E1)[&rate=8.395138687764451E-4]:1.109610358467E0,(((16[&rate=4.358799103908743E-4]:3.836770442352E1,((22[&rate=8.577280109469006E-4]:3.113881321275E0,21[&rate=6.667268513744108E-4]:3.113881321275E0)[&rate=5.226129809154658E-4]:5.124833688898E0,20[&rate=5.437878543307814E-4]:8.238715010174E0)[&rate=0.0012841743133174613]:3.012898941334E1)[&rate=0.0011256770977273267]:3.220656013215E1,(((((4[&rate=8.577280109469006E-4]:1.925187744345E0,2[&rate=8.0548601226399E-4]:1.925187744345E0)[&rate=8.221298226330341E-4]:2.682665308976E-1,3[&rate=8.0548601226399E-4]:2.193454275243E0)[&rate=4.692483936498823E-4]:8.361958293111E0,5[&rate=3.739593235083868E-4]:1.055541256835E1)[&rate=8.395138687764451E-4]:4.798898146801E0,((7[&rate=8.577280109469006E-4]:9.775628026334E0,6[&rate=6.547266681989425E-4]:9.775628026334E0)[&rate=4.471952996959634E-4]:1.534989515307E0,1[&rate=5.544209738651018E-4]:1.131061754164E1)[&rate=6.667268513744108E-4]:4.043693173515E0)[&rate=6.199891771093966E-4]:5.364401906522E1,((30[&rate=6.914978334420134E-4]:5.098192502554E1,26[&rate=4.692483936498823E-4]:5.098192502554E1)[&rate=0.0011256770977273267]:8.593362866996E0,32[&rate=3.445076198274998E-4]:5.957528789254E1)[&rate=9.185111377508126E-4]:9.423041887838E0)[&rate=3.873573243855133E-4]:1.575934775289E0)[&rate=9.65764734551548E-4]:1.831781947074E0,12[&rate=7.043213591352969E-4]:7.240604650274E1)[&rate=5.758693612351338E-4]:1.74305555995E0)[&rate=6.313791698762709E-4]:2.695891137715E0,(17[&rate=0.0010520421100225041]:6.192242243193E1,(27[&rate=5.758693612351338E-4]:2.783122428618E1,28[&rate=9.185111377508126E-4]:2.783122428618E1)[&rate=9.65764734551548E-4]:3.409119814574E1)[&rate=4.358799103908743E-4]:1.492257076848E1)[&rate=0.0016294756084552337]:5.302799350411E1); +tree STATE_990000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55133.54873380309,EEF_ucld_branchRates=-266.168517335019,lnP=-55133.54873380309,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.9147285856247195E-4]:8.173183096519E0,9[&rate=8.143781828224616E-4]:8.173183096519E0)[&rate=4.156474322614012E-4]:8.735495367781E0,15[&rate=5.115583619712337E-4]:1.69086784643E1)[&rate=8.8064112061869E-4]:1.010836425687E2,(14[&rate=0.0010555537481518865]:4.972838070335E1,24[&rate=0.0010207836918755067]:4.972838070335E1)[&rate=0.0011355154828000444]:6.826394032966E1)[&rate=4.993742632883034E-4]:1.178592184822E1,((((((16[&rate=2.470870355411002E-4]:4.284381472516E1,((22[&rate=6.435980992640667E-4]:3.658796743773E0,21[&rate=4.276063177870558E-4]:3.658796743773E0)[&rate=3.4086869728733045E-4]:4.460158187041E0,20[&rate=5.747037934758157E-4]:8.118954930815E0)[&rate=0.0014553993534517848]:3.472485979435E1)[&rate=0.0017185997004242387]:3.038537724325E1,(((30[&rate=9.589879795261333E-4]:4.924259479887E1,26[&rate=4.036147393243707E-4]:4.924259479887E1)[&rate=9.589879795261333E-4]:1.198862952761E1,32[&rate=3.6669064370178326E-4]:6.123122432648E1)[&rate=6.734977004948781E-4]:1.030645103532E1,((((4[&rate=2.470870355411002E-4]:2.119115937468E0,2[&rate=6.435980992640667E-4]:2.119115937468E0)[&rate=0.0019576056538517595]:7.767462627953E-1,3[&rate=0.0010207836918755067]:2.895862200263E0)[&rate=5.87927518630544E-4]:1.067372106625E1,5[&rate=3.2737359499432497E-4]:1.356958326651E1)[&rate=6.435980992640667E-4]:1.850617275052E0,((7[&rate=4.5142435226431436E-4]:9.149432083017E0,6[&rate=8.574231350838069E-4]:9.149432083017E0)[&rate=4.872901086235675E-4]:2.254788394284E0,1[&rate=3.539438902590613E-4]:1.14042204773E1)[&rate=8.143781828224616E-4]:4.015980064259E0)[&rate=6.292102681220622E-4]:5.611747482024E1)[&rate=0.0010935679185995952]:1.691516606609E0)[&rate=6.014027757605835E-4]:1.348945149704E0,12[&rate=9.589879795261333E-4]:7.457813711812E1)[&rate=7.051372855936251E-4]:1.43428163821E0,25[&rate=5.87927518630544E-4]:7.601241875633E1)[&rate=4.993742632883034E-4]:1.069927573256E0,((((11[&rate=8.143781828224616E-4]:1.337707797553E1,29[&rate=0.0012352829368172881]:1.337707797553E1)[&rate=9.051823307353437E-4]:5.605812824541E1,(33[&rate=8.8064112061869E-4]:6.181080479531E1,13[&rate=3.6669064370178326E-4]:6.181080479531E1)[&rate=3.7918090429176914E-4]:7.624401425628E0)[&rate=4.036147393243707E-4]:1.925606415298E0,(19[&rate=6.583493221634288E-4]:2.179601353008E1,18[&rate=5.115583619712337E-4]:2.179601353008E1)[&rate=5.115583619712337E-4]:4.956479910616E1)[&rate=7.38860436057362E-4]:2.021374505021E0,((10[&rate=8.353779839440136E-4]:2.08041030607E1,31[&rate=0.0011823240764984584]:2.08041030607E1)[&rate=4.276063177870558E-4]:5.074921830633E1,23[&rate=3.7918090429176914E-4]:7.155332136702E1)[&rate=3.1333848451668196E-4]:1.828865774237E0)[&rate=3.9147285856247195E-4]:3.700159188321E0)[&rate=5.238630524555457E-4]:4.223960165094E0,(17[&rate=8.353779839440136E-4]:7.12757882786E1,(27[&rate=4.5142435226431436E-4]:3.325810315451E1,28[&rate=9.589879795261333E-4]:3.325810315451E1)[&rate=8.353779839440136E-4]:3.801768512409E1)[&rate=1.9772198890520554E-4]:1.003051821608E1)[&rate=0.0014553993534517848]:4.847193638655E1); +tree STATE_1000000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55125.22243813254,EEF_ucld_branchRates=-266.168517335019,lnP=-55125.22243813254,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.870675576725991E-4]:1.035757468532E1,9[&rate=7.557063430088424E-4]:1.035757468532E1)[&rate=7.557063430088424E-4]:8.237443843527E0,15[&rate=8.238268021007333E-4]:1.859501852885E1)[&rate=9.360337275730053E-4]:9.836447082196E1,(14[&rate=8.861830379416186E-4]:4.901842308552E1,24[&rate=8.238268021007333E-4]:4.901842308552E1)[&rate=9.644529355256395E-4]:6.794106626529E1)[&rate=5.021049972839778E-4]:1.268384449135E1,((((((16[&rate=4.339744835000574E-4]:3.604734109439E1,((22[&rate=9.959122153919027E-4]:2.612917216353E0,21[&rate=0.0014867199302725557]:2.612917216353E0)[&rate=0.0013405846120301836]:5.467517245005E0,20[&rate=8.861830379416186E-4]:8.080434461357E0)[&rate=0.0011747085371819831]:2.796690663304E1)[&rate=7.880649972032026E-4]:3.603871837878E1,(((30[&rate=8.054660641717311E-4]:5.360939647702E1,26[&rate=6.033205621939455E-4]:5.360939647702E1)[&rate=4.634025379529171E-4]:8.337514710909E0,32[&rate=3.467032502198617E-4]:6.194691118793E1)[&rate=3.467032502198617E-4]:9.406547195359E0,((((4[&rate=6.604853385796559E-4]:2.008508048746E0,2[&rate=4.339744835000574E-4]:2.008508048746E0)[&rate=5.021049972839778E-4]:7.716888048485E-1,3[&rate=4.634025379529171E-4]:2.780196853595E0)[&rate=4.634025379529171E-4]:1.072904719664E1,5[&rate=2.870675576725991E-4]:1.350924405023E1)[&rate=7.405719758329578E-4]:1.470408003754E0,((7[&rate=3.928420305712747E-4]:8.392235811655E0,6[&rate=7.71510256535312E-4]:8.392235811655E0)[&rate=3.706970011349665E-4]:7.173346897529E-1,1[&rate=5.716493391438741E-4]:9.109570501408E0)[&rate=1.9745008977640796E-4]:5.870081552579E0)[&rate=6.142571954928735E-4]:5.63738063293E1)[&rate=4.137957265489842E-4]:7.32601089889E-1)[&rate=8.054660641717311E-4]:2.153022182015E0,12[&rate=8.432832487960325E-4]:7.423908165519E1)[&rate=6.985329384777212E-4]:1.443394211062E0,25[&rate=5.118152505654139E-4]:7.568247586625E1)[&rate=6.033205621939455E-4]:1.581873609417E0,((((11[&rate=6.033205621939455E-4]:1.383562747278E1,29[&rate=4.730935690068522E-4]:1.383562747278E1)[&rate=7.557063430088424E-4]:5.422697950926E1,(33[&rate=7.405719758329578E-4]:5.918780944581E1,13[&rate=4.536679235900427E-4]:5.918780944581E1)[&rate=4.339744835000574E-4]:8.874797536221E0)[&rate=4.034378854345923E-4]:1.866015552665E0,(19[&rate=5.614088960304666E-4]:2.001865298895E1,18[&rate=4.034378854345923E-4]:2.001865298895E1)[&rate=6.142571954928735E-4]:4.990996954575E1)[&rate=5.118152505654139E-4]:6.57801272559E0,((10[&rate=6.033205621939455E-4]:2.12180304884E1,31[&rate=6.368260522109144E-4]:2.12180304884E1)[&rate=4.034378854345923E-4]:5.245661806997E1,23[&rate=5.215735162646684E-4]:7.367464855837E1)[&rate=4.339744835000574E-4]:2.831986701917E0)[&rate=0.0010714426411223908]:7.577142153839E-1)[&rate=3.928420305712747E-4]:5.450592522967E0,(17[&rate=5.716493391438741E-4]:7.201493522365E1,(27[&rate=8.238268021007333E-4]:2.871849857043E1,28[&rate=7.557063430088424E-4]:2.871849857043E1)[&rate=8.432832487960325E-4]:4.329643665322E1)[&rate=5.118152505654139E-4]:1.070000677499E1)[&rate=0.0011747085371819831]:4.692839184352E1); +tree STATE_1010000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55120.6002295403,EEF_ucld_branchRates=-266.168517335019,lnP=-55120.6002295403,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.903144721201903E-4]:1.042544895684E1,9[&rate=6.261244713629012E-4]:1.042544895684E1)[&rate=5.775147548618147E-4]:5.80576926096E0,15[&rate=6.136060948901627E-4]:1.62312182178E1)[&rate=8.940757175416415E-4]:9.922099316108E1,(14[&rate=0.0010053563641445483]:4.841910493554E1,24[&rate=8.285342728524506E-4]:4.841910493554E1)[&rate=8.089936993277209E-4]:6.703310644334E1)[&rate=8.285342728524506E-4]:1.322585863414E1,((((((16[&rate=3.903144721201903E-4]:3.828884718836E1,((22[&rate=0.001039734960929364]:3.476175402261E0,21[&rate=5.10015990005466E-4]:3.476175402261E0)[&rate=0.0010779379805749114]:4.914718509595E0,20[&rate=1.748070996359765E-4]:8.390893911855E0)[&rate=0.0012978002512941788]:2.989795327651E1)[&rate=9.740797446322901E-4]:3.45753241067E1,(((30[&rate=7.903878780782313E-4]:5.116716036018E1,26[&rate=5.209603668532543E-4]:5.116716036018E1)[&rate=0.0012978002512941788]:7.725055620049E0,32[&rate=4.56110324941187E-4]:5.889221598023E1)[&rate=3.291715914107245E-4]:1.285948580928E1,((((4[&rate=4.12705961962952E-4]:2.93582931845E0,2[&rate=4.56110324941187E-4]:2.93582931845E0)[&rate=2.450865415812791E-4]:3.305101534236E-1,3[&rate=8.285342728524506E-4]:3.266339471873E0)[&rate=7.903878780782313E-4]:8.26000835845E0,5[&rate=3.903144721201903E-4]:1.152634783032E1)[&rate=7.234878637271453E-4]:4.513850456929E0,((7[&rate=3.903144721201903E-4]:8.761176488842E0,6[&rate=4.015976310636382E-4]:8.761176488842E0)[&rate=4.12705961962952E-4]:1.048561646216E0,1[&rate=4.2367926175457905E-4]:9.809738135059E0)[&rate=0.001505551372568411]:6.230460152193E0)[&rate=6.389280550313043E-4]:5.571150350225E1)[&rate=3.5488888316876325E-4]:1.112469505549E0)[&rate=7.726155329826111E-4]:2.687351308304E0,12[&rate=8.940757175416415E-4]:7.555152260336E1)[&rate=4.2367926175457905E-4]:2.852398846775E0,25[&rate=7.726155329826111E-4]:7.840392145014E1)[&rate=5.658975116679521E-4]:8.455988946389E-1,((((11[&rate=6.793396491512761E-4]:1.400549607063E1,29[&rate=6.01347317356406E-4]:1.400549607063E1)[&rate=8.709191418707708E-4]:5.35667483986E1,(33[&rate=8.709191418707708E-4]:6.047980118067E1,13[&rate=5.320024467706047E-4]:6.047980118067E1)[&rate=3.903144721201903E-4]:7.092443288557E0)[&rate=3.291715914107245E-4]:5.59379701143E0,(19[&rate=4.345517048235722E-4]:2.408516097331E1,18[&rate=2.6623725938250496E-4]:2.408516097331E1)[&rate=4.56110324941187E-4]:4.908088050734E1)[&rate=8.089936993277209E-4]:3.332912007366E0,((10[&rate=6.136060948901627E-4]:2.04138871157E1,31[&rate=4.991511534489875E-4]:2.04138871157E1)[&rate=4.991511534489875E-4]:5.410939028226E1,23[&rate=4.668472142727088E-4]:7.452327739796E1)[&rate=8.709191418707708E-4]:1.975676090056E0)[&rate=6.261244713629012E-4]:2.750566856755E0)[&rate=9.453668911413456E-4]:4.51163651019E0,(17[&rate=5.775147548618147E-4]:7.695309843141E1,(27[&rate=5.10015990005466E-4]:3.115151110414E1,28[&rate=0.0012978002512941788]:3.115151110414E1)[&rate=6.520445336261696E-4]:4.580158732727E1)[&rate=8.285342728524506E-4]:6.808058423555E0)[&rate=0.0013859456784206473]:4.491691315806E1); +tree STATE_1020000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55131.977504188566,EEF_ucld_branchRates=-266.168517335019,lnP=-55131.977504188566,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.752520877308332E-4]:8.550461661567E0,9[&rate=7.934540631225069E-4]:8.550461661567E0)[&rate=7.401713981203268E-4]:7.765071685622E0,15[&rate=4.792763237443705E-4]:1.631553334719E1)[&rate=8.338283471843342E-4]:9.981809616086E1,(14[&rate=0.0011736288586194706]:4.64281517727E1,24[&rate=9.618230653288149E-4]:4.64281517727E1)[&rate=0.001239958960334047]:6.970547773535E1)[&rate=8.130729917411737E-4]:1.3168954439E1,((((((16[&rate=4.071558949319246E-4]:3.850902181957E1,((22[&rate=0.0014373423907030366]:2.197900847021E0,21[&rate=8.558821168678292E-4]:2.197900847021E0)[&rate=7.748368441311496E-4]:5.423672599098E0,20[&rate=5.213044845205424E-4]:7.621573446119E0)[&rate=0.001239958960334047]:3.088744837345E1)[&rate=0.00103088864885205]:3.336377341543E1,(((30[&rate=5.541000429215384E-4]:4.7435251004E1,26[&rate=6.512472786987255E-4]:4.7435251004E1)[&rate=7.401713981203268E-4]:1.16392750241E1,32[&rate=3.752520877308332E-4]:5.90745260281E1)[&rate=4.792763237443705E-4]:1.025736704599E1,((((4[&rate=2.7379787378284176E-4]:1.891765672297E0,3[&rate=6.004869317784236E-4]:1.891765672297E0)[&rate=7.748368441311496E-4]:2.642405489593E-1,2[&rate=0.001239958960334047]:2.156006221256E0)[&rate=4.071558949319246E-4]:1.194007741113E1,5[&rate=3.860427047608031E-4]:1.409608363239E1)[&rate=5.00106106196758E-4]:1.741412741926E0,((7[&rate=2.5647195349554107E-4]:8.086043045712E0,6[&rate=3.9666458759515425E-4]:8.086043045712E0)[&rate=3.860427047608031E-4]:1.589771877743E0,1[&rate=3.529735760717925E-4]:9.675814923454E0)[&rate=8.130729917411737E-4]:6.161681450861E0)[&rate=4.6895607353647896E-4]:5.349439669978E1)[&rate=4.4841437394835357E-4]:2.54090216091E0)[&rate=8.558821168678292E-4]:8.397268558714E-1,12[&rate=9.945393949109423E-4]:7.271252209087E1)[&rate=3.4136217092521105E-4]:1.024817333236E0,25[&rate=8.338283471843342E-4]:7.373733942411E1)[&rate=3.1674878477869477E-4]:3.406514732217E0,((((11[&rate=4.3815434112214383E-4]:2.129893722418E1,29[&rate=5.885428443725595E-4]:2.129893722418E1)[&rate=6.004869317784236E-4]:4.858760058762E1,(33[&rate=8.794315310991369E-4]:5.679346988191E1,13[&rate=3.1674878477869477E-4]:5.679346988191E1)[&rate=7.401713981203268E-4]:1.309306792989E1)[&rate=6.933431758011924E-4]:2.324621932332E0,(19[&rate=5.885428443725595E-4]:1.972354565094E1,18[&rate=4.3815434112214383E-4]:1.972354565094E1)[&rate=4.071558949319246E-4]:5.248761409319E1)[&rate=7.401713981203268E-4]:1.336258559015E0,((10[&rate=5.541000429215384E-4]:2.092212535591E1,31[&rate=4.896538089166857E-4]:2.092212535591E1)[&rate=2.3619850712911113E-4]:5.207270657471E1,23[&rate=3.752520877308332E-4]:7.299483193062E1)[&rate=5.430110935025883E-4]:5.525863725243E-1)[&rate=6.127018599879783E-4]:3.59643585318E0)[&rate=4.3815434112214383E-4]:3.922254300372E0,(17[&rate=6.127018599879783E-4]:7.420270146345E1,(27[&rate=4.071558949319246E-4]:3.060086547815E1,28[&rate=8.130729917411737E-4]:3.060086547815E1)[&rate=5.885428443725595E-4]:4.36018359853E1)[&rate=9.945393949109423E-4]:6.863406993251E0)[&rate=8.794315310991369E-4]:4.823647549035E1); +tree STATE_1030000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.6354293579,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.6354293579,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.6941559425179495E-4]:8.186378922423E0,9[&rate=6.464031407847066E-4]:8.186378922423E0)[&rate=5.061929911599962E-4]:6.296730501664E0,15[&rate=6.134607302397474E-4]:1.448310942409E1)[&rate=8.362741118485404E-4]:9.646099097155E1,(14[&rate=0.0012742924071094705]:4.454063379608E1,24[&rate=6.820639382506874E-4]:4.454063379608E1)[&rate=0.0011227117085937555]:6.640346659956E1)[&rate=9.908584346661135E-4]:8.784792558563E0,((((((16[&rate=3.4844128382660665E-4]:3.818287300225E1,((22[&rate=9.030115307697507E-4]:2.942091360127E0,21[&rate=3.3588287238860734E-4]:2.942091360127E0)[&rate=3.8233840133932416E-4]:5.02621505051E0,20[&rate=8.789961195588283E-4]:7.968306410637E0)[&rate=7.989550575156367E-4]:3.021456659161E1)[&rate=0.0010279058965115394]:3.000942010434E1,(((30[&rate=7.355017372522286E-4]:4.602515252634E1,26[&rate=5.061929911599962E-4]:4.602515252634E1)[&rate=7.656715465047379E-4]:8.121814389845E0,32[&rate=6.029603923866958E-4]:5.414696691619E1)[&rate=8.568492438141847E-4]:9.131853526697E0,((((4[&rate=7.818743213080396E-4]:2.179438360063E0,2[&rate=7.077928711158399E-4]:2.179438360063E0)[&rate=4.029366747511004E-4]:5.156948343054E-1,3[&rate=6.029603923866958E-4]:2.695133194369E0)[&rate=0.0011227117085937555]:1.086532218654E1,5[&rate=3.715296819835555E-4]:1.356045538091E1)[&rate=6.029603923866958E-4]:1.791292544782E0,((7[&rate=4.029366747511004E-4]:8.690293823264E0,6[&rate=5.628004663485998E-4]:8.690293823264E0)[&rate=7.213729655281962E-4]:2.596135941345E0,1[&rate=3.4844128382660665E-4]:1.128642976461E1)[&rate=4.321344258575211E-4]:4.065318161078E0)[&rate=7.213729655281962E-4]:4.79270725172E1)[&rate=4.8779240248801066E-4]:4.9134726637E0)[&rate=7.989550575156367E-4]:9.143684909511E-1,12[&rate=7.656715465047379E-4]:6.910666159754E1)[&rate=4.321344258575211E-4]:2.802289698461E0,25[&rate=8.170380154705676E-4]:7.1908951296E1)[&rate=4.029366747511004E-4]:9.977815272249E-1,((((11[&rate=5.154428518793253E-4]:1.670109551317E1,29[&rate=4.321344258575211E-4]:1.670109551317E1)[&rate=8.568492438141847E-4]:4.949742727488E1,(33[&rate=9.292823744853958E-4]:5.332322811681E1,13[&rate=5.531303020741833E-4]:5.332322811681E1)[&rate=4.128502606666994E-4]:1.287529467125E1)[&rate=4.22570282567127E-4]:9.554924437596E-1,(19[&rate=6.134607302397474E-4]:1.556064663713E1,18[&rate=6.029603923866958E-4]:1.556064663713E1)[&rate=3.075197153665836E-4]:5.159336859469E1)[&rate=4.6019212910736244E-4]:2.07553039564E0,((10[&rate=7.656715465047379E-4]:2.058142152333E1,31[&rate=4.6019212910736244E-4]:2.058142152333E1)[&rate=5.926633724480712E-4]:4.792719002521E1,23[&rate=4.321344258575211E-4]:6.850861154855E1)[&rate=4.128502606666994E-4]:7.209340789098E-1)[&rate=5.341186688021905E-4]:3.677187195766E0)[&rate=4.509191789110659E-4]:3.372681619596E0,(17[&rate=8.170380154705676E-4]:7.01020751622E1,(27[&rate=2.709393724228811E-4]:3.395683359181E1,28[&rate=0.0011227117085937555]:3.395683359181E1)[&rate=4.786095425861748E-4]:3.614524157039E1)[&rate=5.628004663485998E-4]:6.177339280621E0)[&rate=7.355017372522286E-4]:4.344947851139E1); +tree STATE_1040000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55145.62329388022,EEF_ucld_branchRates=-266.168517335019,lnP=-55145.62329388022,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.0795237044420527E-4]:9.062316810232E0,9[&rate=8.192645376778376E-4]:9.062316810232E0)[&rate=5.193206508351399E-4]:7.156625987809E0,15[&rate=6.238740476065959E-4]:1.621894279804E1)[&rate=5.803756644118637E-4]:1.011126797603E2,(14[&rate=0.0010502523190345833]:4.408148876407E1,24[&rate=0.0011972492984395381]:4.408148876407E1)[&rate=8.791321515147539E-4]:7.325013379431E1)[&rate=4.193860488799674E-4]:1.172743691235E1,(((((((((4[&rate=4.699478787643002E-4]:1.94373096767E0,2[&rate=0.0010914639830022649]:1.94373096767E0)[&rate=6.238740476065959E-4]:3.141740002573E-1,3[&rate=4.896878201165674E-4]:2.257904967927E0)[&rate=4.798289667922035E-4]:1.215165759508E1,5[&rate=5.193206508351399E-4]:1.440956256301E1)[&rate=8.192645376778376E-4]:2.331719303199E0,((7[&rate=6.127072449953287E-4]:1.149894478238E1,6[&rate=3.377992908689067E-4]:1.149894478238E1)[&rate=6.710866413041057E-4]:1.154839516881E0,1[&rate=3.9803849758608266E-4]:1.265378429926E1)[&rate=5.494011306060874E-4]:4.087497566953E0)[&rate=4.399495727551741E-4]:5.188333871872E1,(((30[&rate=4.297452246099698E-4]:4.869790811376E1,26[&rate=7.529200121402888E-4]:4.869790811376E1)[&rate=0.0011972492984395381]:1.101001961293E1,32[&rate=6.127072449953287E-4]:5.970792772669E1)[&rate=6.238740476065959E-4]:7.518995590862E0,(16[&rate=3.510544588047483E-4]:3.792423250359E1,((22[&rate=8.57940329183972E-4]:2.525238733729E0,21[&rate=5.909778758734497E-4]:2.525238733729E0)[&rate=6.966045703368608E-4]:5.125432010756E0,20[&rate=8.380409535533102E-4]:7.650670744485E0)[&rate=7.683899576383563E-4]:3.02735617591E1)[&rate=0.0010914639830022649]:2.930269081396E1)[&rate=3.6356042594422436E-4]:1.39769726738E0)[&rate=4.193860488799674E-4]:3.639703775493E0,12[&rate=4.995439665324221E-4]:7.226432436042E1)[&rate=4.798289667922035E-4]:1.340632540031E0,25[&rate=8.014716337944421E-4]:7.360495690045E1)[&rate=4.5003261158131695E-4]:8.907756300275E-1,((((11[&rate=6.46921227093552E-4]:1.868100573563E1,29[&rate=3.8694600489515177E-4]:1.868100573563E1)[&rate=9.262816579378247E-4]:4.828513360328E1,(33[&rate=8.57940329183972E-4]:5.546713391773E1,13[&rate=4.399495727551741E-4]:5.546713391773E1)[&rate=7.683899576383563E-4]:1.149900542119E1)[&rate=8.192645376778376E-4]:2.494769355021E0,(19[&rate=7.380646833279046E-4]:1.735780303047E1,18[&rate=8.791321515147539E-4]:1.735780303047E1)[&rate=4.193860488799674E-4]:5.210310566347E1)[&rate=5.803756644118637E-4]:1.667692581334E0,((10[&rate=9.018253482663168E-4]:2.035594210759E1,31[&rate=6.352708806988719E-4]:2.035594210759E1)[&rate=2.6965735733400345E-4]:5.005781479451E1,23[&rate=4.6002346673404415E-4]:7.04137569021E1)[&rate=4.0883277474502576E-4]:7.148443731698E-1)[&rate=4.5003261158131695E-4]:3.36713125521E0)[&rate=7.683899576383563E-4]:6.229150990661E0,(17[&rate=9.018253482663168E-4]:7.470471569979E1,(27[&rate=3.7548385611038026E-4]:2.765255464879E1,28[&rate=9.819217350285566E-4]:2.765255464879E1)[&rate=5.292755390462416E-4]:4.705216105099E1)[&rate=8.791321515147539E-4]:6.020167821356E0)[&rate=0.001517160121365993]:4.833417594959E1); +tree STATE_1050000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55140.71766048652,EEF_ucld_branchRates=-266.168517335019,lnP=-55140.71766048652,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.960708476727161E-4]:9.808773305514E0,9[&rate=4.776393701358584E-4]:9.808773305514E0)[&rate=9.654024195225677E-4]:6.086234715942E0,15[&rate=7.436879433949868E-4]:1.589500802146E1)[&rate=5.712047296161358E-4]:1.041703013508E2,(14[&rate=9.104381003403188E-4]:4.043382268289E1,24[&rate=0.0011284928430587066]:4.043382268289E1)[&rate=8.440603404013136E-4]:7.963148668938E1)[&rate=0.0010344782037690352]:9.289068958016E0,((((((16[&rate=4.4021574201124464E-4]:3.88106141339E1,((22[&rate=5.145164181001073E-4]:2.942484065917E0,21[&rate=6.43550139190971E-4]:2.942484065917E0)[&rate=5.424925061917413E-4]:5.171321547008E0,20[&rate=8.86560314005066E-4]:8.113805612924E0)[&rate=0.0011284928430587066]:3.069680852098E1)[&rate=0.0016988018208742778]:3.123193594314E1,(((30[&rate=7.898989465411502E-4]:5.022193798197E1,26[&rate=7.436879433949868E-4]:5.022193798197E1)[&rate=4.2084034026752695E-4]:1.291142411684E1,32[&rate=4.868619105324113E-4]:6.313336209881E1)[&rate=7.436879433949868E-4]:6.574238087986E0,((((4[&rate=3.9015792586891455E-4]:2.179045799886E0,2[&rate=3.7928068216263136E-4]:2.179045799886E0)[&rate=8.440603404013136E-4]:5.836284436975E-1,3[&rate=6.113729960122972E-4]:2.762674243583E0)[&rate=4.4021574201124464E-4]:1.400363808925E1,5[&rate=2.778194730735305E-4]:1.676631233283E1)[&rate=4.2084034026752695E-4]:1.432015540846E0,((7[&rate=4.496963091497279E-4]:1.279937918287E1,6[&rate=4.590777032288949E-4]:1.279937918287E1)[&rate=6.113729960122972E-4]:1.55494728886E0,1[&rate=3.679446349808012E-4]:1.435432647173E1)[&rate=4.496963091497279E-4]:3.844001401944E0)[&rate=7.436879433949868E-4]:5.150927231312E1)[&rate=5.810113354330564E-4]:3.349498902416E-1)[&rate=7.898989465411502E-4]:2.27459540359E0,12[&rate=7.737571185932862E-4]:7.231714548063E1)[&rate=6.66311938289105E-4]:3.546979811635E0,25[&rate=6.43550139190971E-4]:7.586412529227E1)[&rate=4.0066607454615174E-4]:1.198707450069E0,((((33[&rate=8.24914361987709E-4]:5.815820464637E1,13[&rate=2.978471313525928E-4]:5.815820464637E1)[&rate=4.306078997156629E-4]:1.056067700376E1,(11[&rate=6.010775181693174E-4]:1.830947634312E1,29[&rate=4.590777032288949E-4]:1.830947634312E1)[&rate=6.010775181693174E-4]:5.040940530701E1)[&rate=6.547825763610909E-4]:2.672840064703E0,(19[&rate=8.069103554496241E-4]:1.152596652684E1,18[&rate=8.645322480940321E-4]:1.152596652684E1)[&rate=3.4337566472316045E-4]:5.986575518799E1)[&rate=8.440603404013136E-4]:3.601786805055E0,((10[&rate=6.113729960122972E-4]:1.750414687301E1,31[&rate=8.24914361987709E-4]:1.750414687301E1)[&rate=4.960708476727161E-4]:5.635867098973E1,23[&rate=4.4021574201124464E-4]:7.386281786274E1)[&rate=5.237853172032244E-4]:1.130690657146E0)[&rate=4.776393701358584E-4]:2.069324222451E0)[&rate=4.2084034026752695E-4]:4.265920667554E0,(17[&rate=7.160562700414259E-4]:7.460611317771E1,(27[&rate=3.4337566472316045E-4]:2.865049184355E1,28[&rate=9.977074320712477E-4]:2.865049184355E1)[&rate=8.86560314005066E-4]:4.595562133416E1)[&rate=5.810113354330564E-4]:6.722640232182E0)[&rate=7.737571185932862E-4]:4.80256249204E1); +tree STATE_1060000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55119.32416763868,EEF_ucld_branchRates=-266.168517335019,lnP=-55119.32416763868,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.285274060871499E-4]:9.863269922669E0,9[&rate=7.468943558519935E-4]:9.863269922669E0)[&rate=8.129609951706488E-4]:6.010933403088E0,15[&rate=4.3320259746730853E-4]:1.587420332576E1)[&rate=7.782901603250507E-4]:9.876799194555E1,(14[&rate=0.0011518607463929065]:4.542488471103E1,24[&rate=8.518772196445236E-4]:4.542488471103E1)[&rate=6.093554706287133E-4]:6.921731056027E1)[&rate=8.518772196445236E-4]:1.433332672982E1,((((((16[&rate=4.0324770536578696E-4]:4.377359189147E1,((22[&rate=3.71085178077714E-4]:3.306878705164E0,21[&rate=7.468943558519935E-4]:3.306878705164E0)[&rate=9.794384188289314E-4]:5.186642879439E0,20[&rate=0.001097572115914338]:8.493521584603E0)[&rate=7.180869865212477E-4]:3.528007030687E1)[&rate=0.0010135076987645747]:2.719354245251E1,(((30[&rate=7.951638281928086E-4]:5.425142305491E1,26[&rate=4.134126451866991E-4]:5.425142305491E1)[&rate=0.001052338722155302]:8.565542214711E0,32[&rate=4.0324770536578696E-4]:6.281696526963E1)[&rate=5.678193139668634E-4]:6.752237563605E0,((((4[&rate=6.543625047861396E-4]:2.711093125182E0,2[&rate=8.96479293311033E-4]:2.711093125182E0)[&rate=4.525006645342239E-4]:7.139762135097E-1,3[&rate=5.882368508739328E-4]:3.425069338691E0)[&rate=6.093554706287133E-4]:1.207445578971E1,5[&rate=6.313354932256172E-4]:1.54995251284E1)[&rate=5.779497054226304E-4]:3.01315571228E0,((7[&rate=4.3320259746730853E-4]:1.216529303195E1,6[&rate=4.134126451866991E-4]:1.216529303195E1)[&rate=2.426032695607195E-4]:1.250146063844E0,1[&rate=4.809830692282908E-4]:1.341543909579E1)[&rate=7.951638281928086E-4]:5.097241744887E0)[&rate=4.6203425315648514E-4]:5.105652199255E1)[&rate=4.525006645342239E-4]:1.397931510752E0)[&rate=6.313354932256172E-4]:4.039396155719E0,12[&rate=7.782901603250507E-4]:7.50065304997E1)[&rate=3.928443382633107E-4]:1.277939056843E0,25[&rate=5.479600421039498E-4]:7.628446955654E1)[&rate=4.428984345879206E-4]:2.156949726723E0,((((33[&rate=7.622309652186227E-4]:5.720639225305E1,13[&rate=5.093953001214512E-4]:5.720639225305E1)[&rate=6.543625047861396E-4]:1.405770218933E1,(11[&rate=3.346610813923465E-4]:1.873049260425E1,29[&rate=8.96479293311033E-4]:1.873049260425E1)[&rate=6.313354932256172E-4]:5.253360183813E1)[&rate=8.733510694823985E-4]:9.320319972522E-1,(19[&rate=5.678193139668634E-4]:1.074360974389E1,18[&rate=8.96479293311033E-4]:1.074360974389E1)[&rate=4.904375394040267E-4]:6.145251669573E1)[&rate=4.3320259746730853E-4]:3.684642593851E0,((10[&rate=7.32202102898508E-4]:1.984221861763E1,31[&rate=4.809830692282908E-4]:1.984221861763E1)[&rate=2.8868900817048687E-4]:5.547107220274E1,23[&rate=4.134126451866991E-4]:7.531329082037E1)[&rate=3.474831174709601E-4]:5.67478213104E-1)[&rate=3.71085178077714E-4]:2.560650249789E0)[&rate=8.31812479136518E-4]:4.901765412373E0,(17[&rate=8.518772196445236E-4]:7.767070573967E1,(27[&rate=5.98699000622471E-4]:2.795417245851E1,28[&rate=0.0010135076987645747]:2.795417245851E1)[&rate=4.715215906884178E-4]:4.971653328115E1)[&rate=4.525006645342239E-4]:5.672478955973E0)[&rate=0.00176174115828845]:4.563233730548E1); +tree STATE_1070000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55129.794636509185,EEF_ucld_branchRates=-266.168517335019,lnP=-55129.794636509185,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.8172473052696E-4]:9.206867550012E0,9[&rate=7.624734298737289E-4]:9.206867550012E0)[&rate=5.217689993200701E-4]:8.67103971363E0,15[&rate=3.4454831077793883E-4]:1.787790726364E1)[&rate=7.269941253380213E-4]:9.858606018488E1,(14[&rate=0.0011575165348884752]:4.668250537025E1,24[&rate=7.624734298737289E-4]:4.668250537025E1)[&rate=7.442713356634284E-4]:6.978146207827E1)[&rate=8.72764102335958E-4]:7.895442781628E0,((((((16[&rate=4.040319474341064E-4]:4.684549211126E1,((22[&rate=5.763266839527458E-4]:4.409766790505E0,21[&rate=3.5484400275438E-4]:4.409766790505E0)[&rate=9.642640201821443E-4]:5.861710206114E0,20[&rate=3.3399735288822303E-4]:1.027147699662E1)[&rate=8.72764102335958E-4]:3.657401511465E1)[&rate=0.0010021307164639853]:2.765211265248E1,(((((4[&rate=5.649595394928279E-4]:3.286029523823E0,2[&rate=6.948117796417444E-4]:3.286029523823E0)[&rate=2.4352053091756937E-4]:2.992787939667E-1,3[&rate=8.240052781732198E-4]:3.58530831779E0)[&rate=4.3279260078539375E-4]:1.019629575887E1,5[&rate=3.649362511780711E-4]:1.378160407666E1)[&rate=5.429515672235606E-4]:3.622703952688E0,((7[&rate=3.5484400275438E-4]:1.00649232558E1,6[&rate=6.121810483599872E-4]:1.00649232558E1)[&rate=2.0019216702859413E-4]:2.038092945586E0,1[&rate=3.649362511780711E-4]:1.210301620139E1)[&rate=3.9438672271803374E-4]:5.301291827958E0)[&rate=4.136338750023068E-4]:5.503125318235E1,((30[&rate=5.322671379926243E-4]:5.120567093934E1,26[&rate=6.948117796417444E-4]:5.120567093934E1)[&rate=3.9438672271803374E-4]:1.224995558155E1,32[&rate=3.8467427909664634E-4]:6.345562652089E1)[&rate=4.040319474341064E-4]:8.979934690808E0)[&rate=4.7144618680923685E-4]:2.06204355205E0)[&rate=8.240052781732198E-4]:2.26786997734E0,12[&rate=5.012578317491164E-4]:7.676547474109E1)[&rate=8.474411144990577E-4]:9.411577515126E-1,25[&rate=5.649595394928279E-4]:7.77066324926E1)[&rate=3.231266552414985E-4]:2.318106061005E0,((((33[&rate=7.624734298737289E-4]:6.398261324415E1,13[&rate=4.6169797533613424E-4]:6.398261324415E1)[&rate=3.649362511780711E-4]:8.405866178292E0,(11[&rate=5.999096235926464E-4]:1.695515390953E1,29[&rate=4.423878106821967E-4]:1.695515390953E1)[&rate=6.948117796417444E-4]:5.543332551291E1)[&rate=5.763266839527458E-4]:8.143193337766E-1,(19[&rate=5.999096235926464E-4]:1.248234748449E1,18[&rate=8.474411144990577E-4]:1.248234748449E1)[&rate=3.9438672271803374E-4]:6.072045127173E1)[&rate=5.429515672235606E-4]:4.027216842862E0,((10[&rate=4.3279260078539375E-4]:1.784895896752E1,31[&rate=0.0010962459524725052]:1.784895896752E1)[&rate=2.7430833061618104E-4]:5.874088640241E1,23[&rate=4.3279260078539375E-4]:7.658984536994E1)[&rate=3.8467427909664634E-4]:6.401702291491E-1)[&rate=3.118537982063007E-4]:2.794722954523E0)[&rate=8.021746985097921E-4]:6.184754844097E0,(17[&rate=6.948117796417444E-4]:7.858839984041E1,(27[&rate=8.021746985097921E-4]:3.182969122478E1,28[&rate=0.0011575165348884752]:3.182969122478E1)[&rate=5.999096235926464E-4]:4.675870861563E1)[&rate=0.0010021307164639853]:7.621093557297E0)[&rate=0.0018681582614768037]:3.814991683245E1); +tree STATE_1080000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55134.03358821694,EEF_ucld_branchRates=-266.168517335019,lnP=-55134.03358821694,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.648877216662546E-4]:9.730094229441E0,9[&rate=6.648877216662546E-4]:9.730094229441E0)[&rate=3.2399515807688415E-4]:7.213033636295E0,15[&rate=8.126820883789653E-4]:1.694312786574E1)[&rate=8.5946212510044E-4]:9.333154554964E1,(14[&rate=0.001386684762868653]:4.53394892539E1,24[&rate=4.918214864417785E-4]:4.53394892539E1)[&rate=0.0012977307029369718]:6.493518416147E1)[&rate=8.126820883789653E-4]:1.700699220446E1,((((((16[&rate=4.8119014068763737E-4]:4.134988658198E1,((22[&rate=0.0018177054310039905]:3.498807537496E0,21[&rate=9.784075448485653E-4]:3.498807537496E0)[&rate=4.2340487563844E-4]:4.335970054043E0,20[&rate=4.703313623957456E-4]:7.834777591539E0)[&rate=9.784075448485653E-4]:3.351510899044E1)[&rate=8.945011870291152E-4]:3.145315014813E1,(((30[&rate=9.784075448485653E-4]:5.127976754542E1,26[&rate=9.336831970547028E-4]:5.127976754542E1)[&rate=7.211237603821982E-4]:1.143398251597E1,32[&rate=5.62790162139294E-4]:6.271375006139E1)[&rate=4.8119014068763737E-4]:7.861595345641E0,((((4[&rate=6.230264118745939E-4]:1.903427509786E0,2[&rate=5.22744558285138E-4]:1.903427509786E0)[&rate=4.5919428086378206E-4]:1.14642399992E0,3[&rate=6.027387047602926E-4]:3.049851509706E0)[&rate=5.62790162139294E-4]:1.177230793286E1,5[&rate=4.5919428086378206E-4]:1.482215944257E1)[&rate=6.542192038069757E-4]:1.938201116751E0,((7[&rate=4.8119014068763737E-4]:9.772486381261E0,6[&rate=0.001133303295923382]:9.772486381261E0)[&rate=9.784075448485653E-4]:1.841051414913E0,1[&rate=5.125651198728016E-4]:1.161353779617E1)[&rate=5.022678063073513E-4]:5.146822763146E0)[&rate=6.230264118745939E-4]:5.381498484771E1)[&rate=6.979659442351829E-4]:2.227691323075E0)[&rate=9.135004495205615E-4]:1.448110545211E0,12[&rate=8.5946212510044E-4]:7.425114727532E1)[&rate=8.126820883789653E-4]:8.044697265348E-1,25[&rate=5.022678063073513E-4]:7.505561700185E1)[&rate=5.022678063073513E-4]:2.384628987007E0,((((33[&rate=0.0010611100032114189]:6.458626409078E1,13[&rate=5.328334720346972E-4]:6.458626409078E1)[&rate=5.62790162139294E-4]:7.103846327643E0,(11[&rate=5.528350573649289E-4]:1.414530852193E1,29[&rate=9.552396137478997E-4]:1.414530852193E1)[&rate=5.827040603395944E-4]:5.754480189649E1)[&rate=8.765308670631525E-4]:1.280297453429E0,(19[&rate=0.0010949025457037873]:1.242306943274E1,18[&rate=7.211237603821982E-4]:1.242306943274E1)[&rate=4.358202773236408E-4]:6.054733843911E1)[&rate=8.945011870291152E-4]:2.063718917234E0,((10[&rate=8.126820883789653E-4]:1.602745742643E1,31[&rate=6.867409980233372E-4]:1.602745742643E1)[&rate=3.2399515807688415E-4]:5.895411607544E1,23[&rate=5.22744558285138E-4]:7.498157350187E1)[&rate=5.125651198728016E-4]:5.255328721036E-2)[&rate=7.211237603821982E-4]:2.40611919978E0)[&rate=6.867409980233372E-4]:2.934243142827E0,(17[&rate=8.431886743766339E-4]:6.882098869099E1,(27[&rate=3.462036830381257E-4]:2.738073846069E1,28[&rate=0.0011778874124643809]:2.738073846069E1)[&rate=6.867409980233372E-4]:4.144025023029E1)[&rate=7.331066861544526E-4]:1.15535004407E1)[&rate=9.135004495205615E-4]:4.690717648815E1); +tree STATE_1090000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.84853873062,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.84853873062,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.208453414419401E-4]:8.805020679128E0,9[&rate=6.608063379082266E-4]:8.805020679128E0)[&rate=4.6022622597981005E-4]:7.896216628115E0,15[&rate=5.302993935119918E-4]:1.670123730724E1)[&rate=9.014763754775282E-4]:9.001330626193E1,(14[&rate=0.0014096049586761821]:4.222758282096E1,24[&rate=0.0011149513324931566]:4.222758282096E1)[&rate=9.629377406187616E-4]:6.448696074821E1)[&rate=9.4089720753323E-4]:1.960163810223E1,((((((16[&rate=3.6376465277983305E-4]:4.187101873818E1,((22[&rate=0.0012944564794138318]:2.998705012015E0,21[&rate=6.806462754774087E-4]:2.998705012015E0)[&rate=4.814459783138822E-4]:5.204576512968E0,20[&rate=8.508652510774143E-4]:8.203281524983E0)[&rate=0.0010762842076049097]:3.36677372132E1)[&rate=9.014763754775282E-4]:2.670515886383E1,(((30[&rate=8.073296510742574E-4]:4.631897029614E1,26[&rate=7.225644832190805E-4]:4.631897029614E1)[&rate=9.4089720753323E-4]:9.66890708888E0,32[&rate=4.7100703314909817E-4]:5.598787738502E1)[&rate=3.4235929076516973E-4]:1.097685221517E1,((((4[&rate=8.668083263733282E-4]:2.391506755923E0,2[&rate=6.040717223535721E-4]:2.391506755923E0)[&rate=4.814459783138822E-4]:2.365280517723E-1,3[&rate=8.356962267739732E-4]:2.628034807695E0)[&rate=5.673421657735794E-4]:1.118510391894E1,5[&rate=4.4902728092780056E-4]:1.381313872664E1)[&rate=8.212100490524422E-4]:2.01947995506E0,((7[&rate=7.939892450285796E-4]:9.117680739874E0,6[&rate=9.4089720753323E-4]:9.117680739874E0)[&rate=5.856782742316435E-4]:3.877072528605E-1,1[&rate=5.948600720656455E-4]:9.505387992735E0)[&rate=5.015299295060334E-4]:6.327230688962E0)[&rate=6.415154945250626E-4]:5.113211091849E1)[&rate=5.015299295060334E-4]:1.611448001827E0)[&rate=5.396538957722829E-4]:2.778252409991E0,12[&rate=8.356962267739732E-4]:7.1354430012E1)[&rate=7.225644832190805E-4]:1.628992809647E0,25[&rate=7.225644832190805E-4]:7.298342282165E1)[&rate=5.948600720656455E-4]:2.523159598324E0,((((33[&rate=7.117532249660856E-4]:5.734930938824E1,13[&rate=4.916037893768911E-4]:5.734930938824E1)[&rate=4.2494913693788333E-4]:1.305991730652E1,(11[&rate=6.806462754774087E-4]:1.782092440049E1,29[&rate=8.668083263733282E-4]:1.782092440049E1)[&rate=6.90816053549248E-4]:5.258830229427E1)[&rate=5.208453414419401E-4]:2.176340139432E0,(19[&rate=0.0010428758731266183]:1.442121030615E1,18[&rate=5.112655113416944E-4]:1.442121030615E1)[&rate=5.015299295060334E-4]:5.816435652804E1)[&rate=5.673421657735794E-4]:1.941325014484E0,((10[&rate=6.806462754774087E-4]:1.605169914962E1,31[&rate=8.668083263733282E-4]:1.605169914962E1)[&rate=2.6727468137656527E-4]:5.789858055704E1,23[&rate=5.208453414419401E-4]:7.395027970666E1)[&rate=7.939892450285796E-4]:5.766121420252E-1)[&rate=5.489321513570119E-4]:9.796905712945E-1)[&rate=0.0010133939952830955]:4.213178245369E0,(17[&rate=8.836346071210225E-4]:6.731364253985E1,(27[&rate=6.226444597277582E-4]:2.806117540153E1,28[&rate=6.608063379082266E-4]:2.806117540153E1)[&rate=5.015299295060334E-4]:3.925246713833E1)[&rate=8.073296510742574E-4]:1.240611812549E1)[&rate=0.0016581039398719311]:4.659642100606E1); +tree STATE_1100000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55156.471880961115,EEF_ucld_branchRates=-266.168517335019,lnP=-55156.471880961115,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.115966459677469E-4]:7.919928361398E0,9[&rate=7.750135864548432E-4]:7.919928361398E0)[&rate=5.116976264559713E-4]:7.477081500854E0,15[&rate=5.359947425860787E-4]:1.539700986225E1)[&rate=6.48465617926052E-4]:1.076893672163E2,(14[&rate=0.0011478768146674489]:4.88177599691E1,24[&rate=9.031718695968001E-4]:4.88177599691E1)[&rate=0.0012477995821671666]:7.426861710944E1)[&rate=6.115966459677469E-4]:5.623426361262E0,((((((16[&rate=5.359947425860787E-4]:3.957711671071E1,((22[&rate=4.534875894111991E-4]:2.796944366718E0,21[&rate=6.389609347369884E-4]:2.796944366718E0)[&rate=4.534875894111991E-4]:4.503599710994E0,20[&rate=5.522883174119177E-4]:7.300544077713E0)[&rate=9.917353212156774E-4]:3.2276572633E1)[&rate=6.115966459677469E-4]:3.22716257552E1,(((30[&rate=8.398400570452972E-4]:4.714129222848E1,26[&rate=6.027969225334676E-4]:4.714129222848E1)[&rate=4.3569321244695143E-4]:1.36796898511E1,32[&rate=4.7058722444453594E-4]:6.082098207958E1)[&rate=6.999055037724992E-4]:9.118308094695E0,((((4[&rate=7.228887229785804E-4]:2.504892644258E0,3[&rate=4.534875894111991E-4]:2.504892644258E0)[&rate=7.610491029513054E-4]:2.954603501312E-1,2[&rate=8.398400570452972E-4]:2.800352994389E0)[&rate=5.522883174119177E-4]:1.115075771391E1,5[&rate=3.3109662395464367E-4]:1.39511107083E1)[&rate=7.897459453937028E-4]:1.539934807728E0,((7[&rate=5.278902350934355E-4]:9.573596511907E0,6[&rate=9.031718695968001E-4]:9.573596511907E0)[&rate=4.069377604194916E-4]:3.717351693009E-1,1[&rate=4.621080085345395E-4]:9.945331681207E0)[&rate=6.48465617926052E-4]:5.54571383482E0)[&rate=6.115966459677469E-4]:5.444824465825E1)[&rate=7.750135864548432E-4]:1.909452291641E0)[&rate=7.477576173772079E-4]:2.600521616616E0,12[&rate=4.954289279104864E-4]:7.444926408253E1)[&rate=7.350598323029043E-4]:1.807527199089E0,25[&rate=9.288996687430473E-4]:7.625679128162E1)[&rate=4.534875894111991E-4]:2.00070909133E0,((((11[&rate=4.7895197146911075E-4]:1.969868253422E1,29[&rate=7.228887229785804E-4]:1.969868253422E1)[&rate=5.197959007965048E-4]:4.936379080404E1,(33[&rate=7.111870569940787E-4]:5.779655956896E1,13[&rate=4.168759205409449E-4]:5.779655956896E1)[&rate=4.168759205409449E-4]:1.12659137693E1)[&rate=4.7058722444453594E-4]:2.179969729533E0,(19[&rate=6.581967192488442E-4]:1.507260395826E1,18[&rate=9.580359127487943E-4]:1.507260395826E1)[&rate=3.855529257626719E-4]:5.616983910953E1)[&rate=2.870172342916196E-4]:4.123004347787E0,((10[&rate=5.771372475646459E-4]:1.949649280237E1,31[&rate=8.591045137822556E-4]:1.949649280237E1)[&rate=2.870172342916196E-4]:5.495970129417E1,23[&rate=6.027969225334676E-4]:7.445619409654E1)[&rate=4.8722562339153364E-4]:9.092533190387E-1)[&rate=8.053611281432012E-4]:2.892052957371E0)[&rate=7.477576173772079E-4]:3.4717268601E0,(17[&rate=7.610491029513054E-4]:6.625221545893E1,(27[&rate=4.534875894111991E-4]:2.541324510083E1,28[&rate=8.053611281432012E-4]:2.541324510083E1)[&rate=4.7895197146911075E-4]:4.083897035809E1)[&rate=4.4469489836139426E-4]:1.547701177412E1)[&rate=0.0010816781540874897]:4.698057620675E1); +tree STATE_1110000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.3752470363,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.3752470363,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.52778970427855E-4]:6.71772245889E0,9[&rate=4.424190874599782E-4]:6.71772245889E0)[&rate=4.1171759254246624E-4]:1.272859167766E1,15[&rate=5.063180499680869E-4]:1.944631413655E1)[&rate=7.075886621723801E-4]:9.993919086305E1,(14[&rate=8.524722169145591E-4]:5.133557109333E1,24[&rate=9.390866118587179E-4]:5.133557109333E1)[&rate=6.908415774465502E-4]:6.804993390627E1)[&rate=5.896220814679888E-4]:9.639957866343E0,((((((16[&rate=3.502006242356142E-4]:3.619328248984E1,((22[&rate=9.077196632478096E-4]:2.773002026316E0,21[&rate=4.7379388491762065E-4]:2.773002026316E0)[&rate=6.300974157969632E-4]:5.196302479321E0,20[&rate=5.523432500741697E-4]:7.969304505637E0)[&rate=0.0011644003633728929]:2.82239779842E1)[&rate=0.0010121564737436764]:3.335862838427E1,(((((4[&rate=6.161945302018636E-4]:2.318290461709E0,3[&rate=3.606237703106146E-4]:2.318290461709E0)[&rate=7.434635860072854E-4]:4.252425436179E-1,2[&rate=2.9495074156152593E-4]:2.743533005327E0)[&rate=5.644652801811244E-4]:1.014875784024E1,5[&rate=3.606237703106146E-4]:1.289229084557E1)[&rate=0.0013261063540181697]:3.208657860953E0,((7[&rate=3.0661597709936934E-4]:1.109632751992E1,6[&rate=7.627841595976633E-4]:1.109632751992E1)[&rate=0.0011056359822729724]:6.615082531269E-1,1[&rate=3.0661597709936934E-4]:1.175783577305E1)[&rate=3.606237703106146E-4]:4.343112933474E0)[&rate=5.644652801811244E-4]:5.2284391939E1,((30[&rate=7.627841595976633E-4]:5.10040949884E1,26[&rate=4.6323142845214365E-4]:5.10040949884E1)[&rate=3.606237703106146E-4]:9.601396471386E0,32[&rate=3.811829285174663E-4]:6.060549145979E1)[&rate=4.0154798180535374E-4]:7.779849185739E0)[&rate=6.300974157969632E-4]:1.166570228586E0)[&rate=8.048083138496528E-4]:2.1801238989E0,12[&rate=8.278331243940449E-4]:7.173203477301E1)[&rate=2.059566932950806E-4]:3.501394306281E0,25[&rate=5.523432500741697E-4]:7.523342907929E1)[&rate=2.059566932950806E-4]:8.907691094599E-1,((((11[&rate=8.278331243940449E-4]:1.92169390943E1,29[&rate=4.6323142845214365E-4]:1.92169390943E1)[&rate=5.644652801811244E-4]:5.075546709951E1,(33[&rate=9.736488793936712E-4]:6.024303474642E1,13[&rate=3.811829285174663E-4]:6.024303474642E1)[&rate=7.250996991978289E-4]:9.729371447386E0)[&rate=3.811829285174663E-4]:1.608166805086E0,(19[&rate=8.048083138496528E-4]:1.341683573405E1,18[&rate=0.0010121564737436764]:1.341683573405E1)[&rate=4.321342435850917E-4]:5.816373726484E1)[&rate=7.831838211330526E-4]:3.415798885978E0,((10[&rate=5.174995152183044E-4]:2.161758393507E1,31[&rate=3.2888601469625254E-4]:2.161758393507E1)[&rate=4.1171759254246624E-4]:5.250951673418E1,23[&rate=4.1171759254246624E-4]:7.412710066925E1)[&rate=3.0661597709936934E-4]:8.692712156194E-1)[&rate=7.627841595976633E-4]:1.127826303879E0)[&rate=0.0016425596747470692]:3.412988799031E0,(17[&rate=9.390866118587179E-4]:6.534577303202E1,(27[&rate=3.502006242356142E-4]:2.728351608548E1,28[&rate=7.250996991978289E-4]:2.728351608548E1)[&rate=5.644652801811244E-4]:3.806225694655E1)[&rate=2.415991429580193E-4]:1.419141395576E1)[&rate=0.001449510077729178]:4.948827587816E1); +tree STATE_1120000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.55528966985,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.55528966985,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.780800078334353E-4]:7.781089722293E0,9[&rate=0.001412976856616016]:7.781089722293E0)[&rate=3.9593023387591425E-4]:1.133137440148E1,15[&rate=3.289762640225695E-4]:1.911246412377E1)[&rate=8.036135002007146E-4]:9.046713929713E1,(14[&rate=9.001460757210527E-4]:4.545808382386E1,24[&rate=0.0011736920301844208]:4.545808382386E1)[&rate=8.036135002007146E-4]:6.412151959704E1)[&rate=8.73604985173127E-4]:1.925612991255E1,((((((16[&rate=3.4058079737728784E-4]:3.355781537548E1,((22[&rate=0.0017578359576524108]:2.630655321945E0,21[&rate=4.1752730132134255E-4]:2.630655321945E0)[&rate=5.408915366978767E-4]:5.812401539432E0,20[&rate=4.391399159600336E-4]:8.443056861377E0)[&rate=9.597147068491323E-4]:2.51147585141E1)[&rate=9.935683386901224E-4]:3.574993106207E1,(((((4[&rate=6.612355518834715E-4]:1.744046922106E0,2[&rate=3.631192857798768E-4]:1.744046922106E0)[&rate=7.443194941612534E-4]:7.063319152204E-1,3[&rate=6.612355518834715E-4]:2.450378837326E0)[&rate=4.1752730132134255E-4]:1.082652601158E1,5[&rate=3.7415125332487863E-4]:1.32769048489E1)[&rate=4.943176439656857E-4]:2.120815738754E0,((7[&rate=2.1124877851028893E-4]:1.106491400035E1,6[&rate=0.0011736920301844208]:1.106491400035E1)[&rate=2.641545557583531E-4]:7.724358022937E-1,1[&rate=4.283205991790264E-4]:1.183734980264E1)[&rate=4.7195437627096075E-4]:3.560370785014E0)[&rate=7.263472338080308E-4]:5.07504031487E1,((30[&rate=4.830748889718986E-4]:4.968334444424E1,26[&rate=4.943176439656857E-4]:4.968334444424E1)[&rate=5.654241552798471E-4]:8.777180936603E0,32[&rate=3.631192857798768E-4]:5.846052538084E1)[&rate=3.8507741290037757E-4]:7.687598355519E0)[&rate=5.910291764036318E-4]:3.159622701188E0)[&rate=0.001072519435700982]:2.29913800601E0,12[&rate=8.255504938676307E-4]:7.160688444356E1)[&rate=3.0475941902139694E-4]:1.071634719382E0,25[&rate=7.631208976170879E-4]:7.267851916294E1)[&rate=1.8594476844694283E-4]:1.05782877769E0,((((11[&rate=3.170639592036967E-4]:1.720716435335E1,29[&rate=5.910291764036318E-4]:1.720716435335E1)[&rate=9.597147068491323E-4]:4.982055700721E1,(33[&rate=8.036135002007146E-4]:6.026800656157E1,13[&rate=5.289683263825607E-4]:6.026800656157E1)[&rate=3.7415125332487863E-4]:6.759714799E0)[&rate=3.631192857798768E-4]:1.210390887539E0,(19[&rate=8.255504938676307E-4]:1.593666045098E1,18[&rate=7.828479696512711E-4]:1.593666045098E1)[&rate=4.391399159600336E-4]:5.230145179712E1)[&rate=5.910291764036318E-4]:3.009874216104E0,((10[&rate=6.612355518834715E-4]:2.578962616527E1,31[&rate=7.631208976170879E-4]:2.578962616527E1)[&rate=6.179205517817627E-4]:4.516866419892E1,23[&rate=4.1752730132134255E-4]:7.095829036418E1)[&rate=4.7195437627096075E-4]:2.896961000233E-1)[&rate=6.042993427274873E-4]:2.48836147642E0)[&rate=0.0011736920301844208]:3.036300308438E0,(17[&rate=0.001030897365106695]:6.748586402687E1,(27[&rate=3.170639592036967E-4]:2.834966567703E1,28[&rate=7.828479696512711E-4]:2.834966567703E1)[&rate=8.488173784369659E-4]:3.913619834984E1)[&rate=3.7415125332487863E-4]:9.286784222193E0)[&rate=0.001547277112882656]:5.206308508438E1); +tree STATE_1130000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55133.928835337036,EEF_ucld_branchRates=-266.168517335019,lnP=-55133.928835337036,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.031560140059146E-4]:6.505818671482E0,9[&rate=0.001239038262532476]:6.505818671482E0)[&rate=5.71057443915998E-4]:9.567627223999E0,15[&rate=5.471336653016367E-4]:1.607344589548E1)[&rate=9.703622500924103E-4]:9.315091060872E1,(14[&rate=0.001125356121527823]:4.40210258119E1,24[&rate=4.6833967209726425E-4]:4.40210258119E1)[&rate=0.001039492760536983]:6.520333069231E1)[&rate=0.0014077206095905095]:1.999951241596E1,((((((16[&rate=4.4661195828691783E-4]:3.088097334835E1,((22[&rate=0.0015361896116283494]:2.895448087877E0,21[&rate=4.902908115261922E-4]:2.895448087877E0)[&rate=8.395196772162355E-4]:6.45853800669E0,20[&rate=3.582450154653724E-4]:9.353986094567E0)[&rate=9.703622500924103E-4]:2.152698725379E1)[&rate=9.703622500924103E-4]:3.953625749916E1,(((((4[&rate=3.8101967377796335E-4]:1.932742055134E0,2[&rate=6.218841462865998E-4]:1.932742055134E0)[&rate=5.239662616048965E-4]:8.908584124578E-1,3[&rate=2.262920128218332E-4]:2.823600467591E0)[&rate=7.599117400220138E-4]:9.143526619177E0,5[&rate=3.2192801373764733E-4]:1.196712708677E1)[&rate=2.646713600169429E-4]:3.714100868994E0,((7[&rate=4.357819261570697E-4]:1.026638321297E1,6[&rate=3.4649666471765333E-4]:1.026638321297E1)[&rate=7.977096304954903E-4]:1.303278430244E0,1[&rate=3.921473751746849E-4]:1.156966164322E1)[&rate=3.3442026004278417E-4]:4.111566312545E0)[&rate=6.933169212198266E-4]:5.315201464014E1,((30[&rate=5.959096270843827E-4]:5.22336379023E1,26[&rate=6.218841462865998E-4]:5.22336379023E1)[&rate=7.253152566876658E-4]:1.096041247467E1,32[&rate=3.921473751746849E-4]:6.319405037698E1)[&rate=6.781432051434982E-4]:5.639192218922E0)[&rate=6.634538609921072E-4]:1.583988251614E0)[&rate=0.002194240689533166]:2.5879719786E0,12[&rate=8.622652948599426E-4]:7.300520282612E1)[&rate=8.395196772162355E-4]:6.575384329942E-1,25[&rate=8.864714168659573E-4]:7.366274125911E1)[&rate=6.492060141041475E-4]:1.482345498202E0,(((19[&rate=8.180517493351567E-4]:1.873565426806E1,18[&rate=4.031560140059146E-4]:1.873565426806E1)[&rate=3.8101967377796335E-4]:5.363480540426E1,((11[&rate=4.5745765064940136E-4]:2.109748011497E1,29[&rate=4.140789653008104E-4]:2.109748011497E1)[&rate=6.087433812394271E-4]:4.874910233569E1,(33[&rate=7.599117400220138E-4]:6.091854468882E1,13[&rate=3.582450154653724E-4]:6.091854468882E1)[&rate=4.140789653008104E-4]:8.92803776184E0)[&rate=9.703622500924103E-4]:2.523877221657E0)[&rate=4.792777155672929E-4]:1.405194436919E0,((10[&rate=5.013975984889435E-4]:2.719239025302E1,31[&rate=8.180517493351567E-4]:2.719239025302E1)[&rate=2.262920128218332E-4]:4.562186448071E1,23[&rate=5.589906759436227E-4]:7.281425473373E1)[&rate=7.977096304954903E-4]:9.613993755061E-1)[&rate=6.087433812394271E-4]:1.369432648075E0)[&rate=3.8101967377796335E-4]:6.108445943956E0,(17[&rate=0.0011776341883834752]:6.851241453326E1,(27[&rate=4.4661195828691783E-4]:3.341560483397E1,28[&rate=9.123608653708172E-4]:3.341560483397E1)[&rate=7.783657218332745E-4]:3.509680969929E1)[&rate=5.126165633670391E-4]:1.274111816801E1)[&rate=8.180517493351567E-4]:4.797033621889E1); +tree STATE_1140000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55137.74345178821,EEF_ucld_branchRates=-266.168517335019,lnP=-55137.74345178821,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.5230902076273726E-4]:6.469736360809E0,9[&rate=4.904273912809993E-4]:6.469736360809E0)[&rate=4.667351625803266E-4]:6.444479736044E0,15[&rate=7.099968038392849E-4]:1.291421609685E1)[&rate=7.360268982599198E-4]:9.583936987561E1,(14[&rate=0.0015469654452583078]:4.523143656285E1,24[&rate=0.0010510557472218404]:4.523143656285E1)[&rate=8.556594438558062E-4]:6.352214940962E1)[&rate=0.001080958839559592]:1.956524666189E1,((((((16[&rate=4.545025606733161E-4]:3.267699705692E1,((22[&rate=5.918172585165557E-4]:3.329326877647E0,21[&rate=0.001190612842078402]:3.329326877647E0)[&rate=9.104128694973533E-4]:6.044135932268E0,20[&rate=9.516370418662035E-4]:9.373462809915E0)[&rate=0.0012369780198693116]:2.330353424701E1)[&rate=9.740637187391942E-4]:3.666116124415E1,(((((4[&rate=7.775065341576183E-4]:2.255899139796E0,2[&rate=7.360268982599198E-4]:2.255899139796E0)[&rate=6.25834760969199E-4]:4.493562446595E-1,3[&rate=9.104128694973533E-4]:2.705255384455E0)[&rate=5.806128084024291E-4]:9.993532919495E0,5[&rate=5.134032698612567E-4]:1.269878830395E1)[&rate=5.359502181636123E-4]:1.640601786804E0,((7[&rate=6.97382164670309E-4]:9.141602815812E0,6[&rate=7.921174283149151E-4]:9.141602815812E0)[&rate=0.001080958839559592]:1.341020052006E0,1[&rate=6.144096641455233E-4]:1.048262286782E1)[&rate=5.582916567484696E-4]:3.856767222936E0)[&rate=5.247152632920035E-4]:5.198677484215E1,((30[&rate=8.731082357081894E-4]:4.843107282513E1,26[&rate=6.490354220098556E-4]:4.843107282513E1)[&rate=8.913281725298224E-4]:1.265766624559E1,32[&rate=4.2893449180937015E-4]:6.108873907072E1)[&rate=5.918172585165557E-4]:5.237425862192E0)[&rate=9.516370418662035E-4]:3.011993368167E0)[&rate=0.002088103086922794]:1.950791553851E0,12[&rate=9.304723139995368E-4]:7.128894985492E1)[&rate=4.154134488845828E-4]:2.087806461602E0,25[&rate=7.228695666286153E-4]:7.337675631653E1)[&rate=7.775065341576183E-4]:1.601100669661E0,(((19[&rate=0.0012910224682573194]:1.529850324931E1,18[&rate=0.0010510557472218404]:1.529850324931E1)[&rate=4.667351625803266E-4]:5.509609410586E1,((11[&rate=3.088029729345156E-4]:2.167678246287E1,29[&rate=5.019850084712192E-4]:2.167678246287E1)[&rate=9.104128694973533E-4]:4.810505628363E1,(33[&rate=9.979427359693802E-4]:5.649939717934E1,13[&rate=5.019850084712192E-4]:5.649939717934E1)[&rate=2.7851074827370546E-4]:1.328244156716E1)[&rate=7.633125519952428E-4]:6.127586086663E-1)[&rate=5.471343746233906E-4]:2.502147612223E0,((10[&rate=8.913281725298224E-4]:2.830577623444E1,31[&rate=5.134032698612567E-4]:2.830577623444E1)[&rate=4.904273912809993E-4]:4.244762811443E1,23[&rate=6.030766543528369E-4]:7.075340434887E1)[&rate=4.667351625803266E-4]:2.143340618517E0)[&rate=4.4192943435048963E-4]:2.081112018797E0)[&rate=6.728305337989467E-4]:5.172403533566E0,(17[&rate=0.0010510557472218404]:6.809869764044E1,(27[&rate=6.728305337989467E-4]:2.866403493301E1,28[&rate=8.913281725298224E-4]:2.866403493301E1)[&rate=8.22764364839206E-4]:3.943466270743E1)[&rate=4.7869232502473934E-4]:1.205156287931E1)[&rate=0.0017152211592683896]:4.81685721146E1); +tree STATE_1150000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55132.15583397838,EEF_ucld_branchRates=-266.168517335019,lnP=-55132.15583397838,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.8313811765572885E-4]:8.277732993737E0,9[&rate=7.022186034213433E-4]:8.277732993737E0)[&rate=4.632190846050816E-4]:6.165380664359E0,15[&rate=2.7993266891059666E-4]:1.44431136581E1)[&rate=8.007630689825537E-4]:9.721787666827E1,(14[&rate=0.0015874933155215184]:4.800161853749E1,24[&rate=8.961528153641692E-4]:4.800161853749E1)[&rate=0.0012148068938390194]:6.365937178888E1)[&rate=7.736384740666215E-4]:1.46465652461E1,((((((16[&rate=3.619052861810251E-4]:3.512091812871E1,((22[&rate=0.0011403325167684728]:4.214354375103E0,21[&rate=3.104784903190988E-4]:4.214354375103E0)[&rate=7.245764595646921E-4]:4.846982992789E0,20[&rate=2.901446886738343E-4]:9.061337367891E0)[&rate=8.961528153641692E-4]:2.605958076082E1)[&rate=9.762991838851309E-4]:3.985325563233E1,(((((4[&rate=3.2065235943633816E-4]:1.942604578454E0,2[&rate=2.7993266891059666E-4]:1.942604578454E0)[&rate=3.8313811765572885E-4]:7.687820043067E-1,3[&rate=5.015707665618452E-4]:2.71138658276E0)[&rate=5.582830547028909E-4]:1.194757461403E1,5[&rate=9.39029441073894E-5]:1.465896119679E1)[&rate=8.961528153641692E-4]:2.421228665418E0,((7[&rate=1.9125438991971609E-4]:1.051565087058E1,6[&rate=3.5146861296180107E-4]:1.051565087058E1)[&rate=2.2696360365283112E-4]:9.240164393847E-1,1[&rate=2.7993266891059666E-4]:1.143966730997E1)[&rate=8.299751231452357E-4]:5.640522552243E0)[&rate=7.245764595646921E-4]:5.521064003382E1,((30[&rate=7.022186034213433E-4]:5.013459796504E1,26[&rate=5.89731479018194E-4]:5.013459796504E1)[&rate=3.8313811765572885E-4]:1.204047681947E1,32[&rate=3.003174727468885E-4]:6.217507478451E1)[&rate=5.582830547028909E-4]:1.011575511153E1)[&rate=2.5926063877513173E-4]:2.683343864997E0)[&rate=0.002474226485228632]:7.004106093832E-1,12[&rate=5.737098845902199E-4]:7.567458437042E1)[&rate=4.884431399494666E-4]:2.034503309412E0,25[&rate=8.007630689825537E-4]:7.770908767983E1)[&rate=4.161637173012407E-4]:1.989250333003E0,(((19[&rate=8.961528153641692E-4]:1.61033702242E1,18[&rate=7.736384740666215E-4]:1.61033702242E1)[&rate=2.6965012724017393E-4]:5.909518430665E1,((11[&rate=3.104784903190988E-4]:2.348853455633E1,29[&rate=2.4872077802977116E-4]:2.348853455633E1)[&rate=6.237981510512977E-4]:4.983854383572E1,(33[&rate=7.483196375783033E-4]:6.310234342154E1,13[&rate=3.4112705576945984E-4]:6.310234342154E1)[&rate=5.290132196505338E-4]:1.02247349705E1)[&rate=7.245764595646921E-4]:1.871476138806E0)[&rate=3.003174727468885E-4]:1.094568854001E0,((10[&rate=4.5106759416288164E-4]:2.398080343172E1,31[&rate=5.015707665618452E-4]:2.398080343172E1)[&rate=4.161637173012407E-4]:5.034813652561E1,23[&rate=5.290132196505338E-4]:7.432893995733E1)[&rate=2.5926063877513173E-4]:1.964183427519E0)[&rate=4.5106759416288164E-4]:3.405214627984E0)[&rate=3.104784903190988E-4]:1.684941139151E0,(17[&rate=6.610466561823494E-4]:6.939391899879E1,(27[&rate=1.463547273426599E-4]:3.01977060807E1,28[&rate=6.419833039831087E-4]:3.01977060807E1)[&rate=0.0011403325167684728]:3.919621291809E1)[&rate=2.2696360365283112E-4]:1.19893601532E1)[&rate=0.0015874933155215184]:4.492427642049E1); +tree STATE_1160000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55125.764568051585,EEF_ucld_branchRates=-266.168517335019,lnP=-55125.764568051585,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.631786091322731E-4]:6.920200983172E0,9[&rate=8.121091018909791E-4]:6.920200983172E0)[&rate=5.193387152105766E-4]:6.676573743337E0,15[&rate=8.471085831108848E-4]:1.359677472651E1)[&rate=7.112465279020951E-4]:9.445137048908E1,(14[&rate=0.0013458100727462344]:4.664393211611E1,24[&rate=6.408135168490522E-4]:4.664393211611E1)[&rate=8.471085831108848E-4]:6.140421309948E1)[&rate=8.86337130987786E-4]:2.047653793863E1,((((((((30[&rate=8.66118664440226E-4]:5.125091656735E1,26[&rate=6.631786091322731E-4]:5.125091656735E1)[&rate=7.958809590249262E-4]:1.017578777441E1,32[&rate=4.1894762304937373E-4]:6.142670434175E1)[&rate=3.8454599891890595E-4]:1.00779190291E1,((((4[&rate=4.296840503419742E-4]:1.815804121258E0,2[&rate=0.0010875554754827684]:1.815804121258E0)[&rate=6.865824303874131E-4]:5.762690953907E-1,3[&rate=4.296840503419742E-4]:2.392073216649E0)[&rate=4.705251634520583E-4]:8.255415862011E0,5[&rate=7.112465279020951E-4]:1.064748907866E1)[&rate=4.803977319710123E-4]:4.742837698568E0,((7[&rate=2.1782718967373112E-4]:9.32107880643E0,6[&rate=8.291487915315137E-4]:9.32107880643E0)[&rate=4.401658883755128E-4]:1.630087477749E0,1[&rate=3.9646222797532795E-4]:1.095116628418E1)[&rate=0.0010875554754827684]:4.439160493049E0)[&rate=6.299611500458281E-4]:5.611429659363E1)[&rate=5.682280137015787E-4]:1.010470357965E0,(16[&rate=4.5044101539318206E-4]:3.699375688064E1,((22[&rate=9.312270775563368E-4]:2.389666865276E0,21[&rate=5.096432895083595E-4]:2.389666865276E0)[&rate=6.408135168490522E-4]:7.811044456224E0,20[&rate=5.387617993221473E-4]:1.02007113215E1)[&rate=0.0017910315569227145]:2.679304555914E1)[&rate=9.840417147777328E-4]:3.552133684818E1)[&rate=9.312270775563368E-4]:2.620428470634E0,12[&rate=8.121091018909791E-4]:7.513552219945E1)[&rate=4.6054942476054947E-4]:3.900831474104E-1,25[&rate=7.958809590249262E-4]:7.552560534686E1)[&rate=9.312270775563368E-4]:1.478704686743E0,(((33[&rate=7.512156502779765E-4]:6.222807729106E1,13[&rate=4.401658883755128E-4]:6.222807729106E1)[&rate=8.66118664440226E-4]:9.857434468389E0,((11[&rate=4.6054942476054947E-4]:1.825894682464E1,29[&rate=5.290391152241598E-4]:1.825894682464E1)[&rate=5.387617993221473E-4]:5.175404175795E1,(19[&rate=4.999345917326469E-4]:1.566212390705E1,18[&rate=7.958809590249262E-4]:1.566212390705E1)[&rate=3.5872686907144677E-4]:5.435086467554E1)[&rate=5.984785995064692E-4]:2.072523176859E0)[&rate=4.0789808553488334E-4]:1.407005176133E0,((10[&rate=6.865824303874131E-4]:2.431815037946E1,31[&rate=5.984785995064692E-4]:2.431815037946E1)[&rate=2.898888770131878E-4]:4.750450399692E1,23[&rate=6.193006832771525E-4]:7.182265437638E1)[&rate=4.901931202618751E-4]:1.669862559198E0)[&rate=3.4440473537329023E-4]:3.511793098025E0)[&rate=7.112465279020951E-4]:3.562069751172E0,(17[&rate=9.079586974451197E-4]:6.996098358628E1,(27[&rate=5.782029314337533E-4]:3.054810781442E1,28[&rate=0.0010875554754827684]:3.054810781442E1)[&rate=7.65506735186872E-4]:3.941287577186E1)[&rate=4.803977319710123E-4]:1.06053961985E1)[&rate=0.0013458100727462344]:4.795830336944E1); +tree STATE_1170000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55131.00331870173,EEF_ucld_branchRates=-266.168517335019,lnP=-55131.00331870173,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.542552018188383E-4]:7.278409787561E0,9[&rate=6.564510141123168E-4]:7.278409787561E0)[&rate=5.277660281470275E-4]:6.319540216539E0,15[&rate=7.940309510950135E-4]:1.35979500041E1)[&rate=9.242081858901678E-4]:8.764980100548E1,(14[&rate=7.940309510950135E-4]:4.55657507427E1,24[&rate=0.001014004263361372]:4.55657507427E1)[&rate=0.001629098116962156]:5.568200026689E1)[&rate=0.001137871874497968]:2.464489842708E1,((((((((30[&rate=6.435093226010557E-4]:5.026911800518E1,26[&rate=5.170879886926286E-4]:5.026911800518E1)[&rate=3.6756005998326386E-4]:1.373586706862E1,32[&rate=4.43811476278961E-4]:6.400498507379E1)[&rate=4.6467301534505685E-4]:9.145052445648E0,((((4[&rate=4.227493404543816E-4]:1.906355937245E0,2[&rate=9.515531126474297E-4]:1.906355937245E0)[&rate=9.515531126474297E-4]:5.953817341287E-1,3[&rate=5.064987423281247E-4]:2.501737671374E0)[&rate=6.975460614585562E-4]:1.057478317321E1,5[&rate=3.790568126423792E-4]:1.307652084458E1)[&rate=6.975460614585562E-4]:2.536162627894E0,((7[&rate=6.697473678898233E-4]:9.452777994389E0,6[&rate=9.813163322383094E-4]:9.452777994389E0)[&rate=4.542552018188383E-4]:1.786118343869E0,1[&rate=7.762290428511893E-4]:1.123889633826E1)[&rate=3.4341993728585334E-4]:4.373787134219E0)[&rate=3.790568126423792E-4]:5.753735404696E1)[&rate=7.592146328146416E-4]:1.944266221239E0,(16[&rate=4.120754016238206E-4]:3.840261506186E1,((22[&rate=0.0013417903287754416]:2.595260197706E0,21[&rate=3.902721220681051E-4]:2.595260197706E0)[&rate=4.120754016238206E-4]:9.045093356644E0,20[&rate=1.784003484515904E-4]:1.164035355435E1)[&rate=8.323967550210683E-4]:2.676226150751E1)[&rate=0.0014545161971881073]:3.669168867882E1)[&rate=0.0010911334569830924]:2.681450063639E0,12[&rate=8.753075008086558E-4]:7.777575380432E1)[&rate=6.185671840875535E-4]:1.039461350979E0,25[&rate=6.185671840875535E-4]:7.88152151553E1)[&rate=4.43811476278961E-4]:1.773191416267E0,(((19[&rate=7.940309510950135E-4]:1.536683910295E1,18[&rate=6.834329432048742E-4]:1.536683910295E1)[&rate=4.43811476278961E-4]:6.055722619273E1,((11[&rate=3.0245045082288494E-4]:2.318822072449E1,29[&rate=4.012627500593491E-4]:2.318822072449E1)[&rate=7.272312575634321E-4]:5.160152751478E1,(33[&rate=8.988940286301705E-4]:6.189808015986E1,13[&rate=4.8551612340910413E-4]:6.189808015986E1)[&rate=5.831099664171907E-4]:1.289166807941E1)[&rate=3.0245045082288494E-4]:1.13431705641E0)[&rate=6.065117524093762E-4]:1.22548121081E0,((10[&rate=6.564510141123168E-4]:2.302496817176E1,31[&rate=8.753075008086558E-4]:2.302496817176E1)[&rate=5.494586529473409E-4]:5.141372536616E1,23[&rate=5.717195692932298E-4]:7.443869353792E1)[&rate=5.064987423281247E-4]:2.710852968573E0)[&rate=3.557112163852169E-4]:3.438860065072E0)[&rate=8.532069844328745E-4]:1.598328086157E0,(17[&rate=8.323967550210683E-4]:7.399556651321E1,(27[&rate=4.012627500593491E-4]:2.863542246202E1,28[&rate=8.753075008086558E-4]:2.863542246202E1)[&rate=5.831099664171907E-4]:4.53601440512E1)[&rate=2.479812123353225E-4]:8.191168144505E0)[&rate=0.001137871874497968]:4.370591477895E1); +tree STATE_1180000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55118.2783224794,EEF_ucld_branchRates=-266.168517335019,lnP=-55118.2783224794,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=1.7887391082005278E-4]:8.894243833409E0,9[&rate=3.4837076289372695E-4]:8.894243833409E0)[&rate=6.128257673930045E-4]:4.799735013251E0,15[&rate=4.1540512216032096E-4]:1.369397884666E1)[&rate=8.551627832274456E-4]:9.571632075781E1,(14[&rate=9.155292660897223E-4]:5.023349618194E1,24[&rate=6.711449945111372E-4]:5.023349618194E1)[&rate=0.0013483309723881017]:5.917680342253E1)[&rate=0.001236526289319526]:1.887444246372E1,((((((((30[&rate=8.28820550945165E-4]:4.982597445431E1,26[&rate=7.042254624015223E-4]:4.982597445431E1)[&rate=5.995308920710815E-4]:1.584354434843E1,32[&rate=2.8648933688249744E-4]:6.566951880274E1)[&rate=4.6428371849377935E-4]:7.197353235788E0,((((4[&rate=3.772396782632615E-4]:2.685175240019E0,3[&rate=3.867734550236479E-4]:2.685175240019E0)[&rate=6.408536413937574E-4]:2.059946192371E-1,2[&rate=6.872975724910793E-4]:2.891169859256E0)[&rate=5.741694238631508E-4]:9.032037852326E0,5[&rate=3.18507447413342E-4]:1.192320771158E1)[&rate=7.408012309525847E-4]:3.583410469484E0,((7[&rate=3.385714050504406E-4]:1.066586892095E1,6[&rate=3.962995449284787E-4]:1.066586892095E1)[&rate=4.950355007833177E-4]:4.817958449449E-1,1[&rate=5.274322834731593E-4]:1.11476647659E1)[&rate=5.741694238631508E-4]:4.35895341517E0)[&rate=6.872975724910793E-4]:5.736025385746E1)[&rate=7.818558392965744E-4]:1.640339824911E0,(16[&rate=3.18507447413342E-4]:4.174399113425E1,((22[&rate=8.551627832274456E-4]:2.36387176602E0,21[&rate=5.386898306023766E-4]:2.36387176602E0)[&rate=3.772396782632615E-4]:5.97835279043E0,20[&rate=2.2027490847651462E-4]:8.342224556449E0)[&rate=9.904581247344563E-4]:3.34017665778E1)[&rate=0.0013483309723881017]:3.276322072919E1)[&rate=7.220229761159482E-4]:1.820117929893E0,12[&rate=8.044852906821358E-4]:7.632732979333E1)[&rate=3.385714050504406E-4]:2.434210959305E0,25[&rate=6.128257673930045E-4]:7.876154075264E1)[&rate=7.408012309525847E-4]:8.750247137504E-1,(((19[&rate=4.4445865317864247E-4]:1.498498418436E1,18[&rate=7.818558392965744E-4]:1.498498418436E1)[&rate=3.772396782632615E-4]:6.117449335609E1,((11[&rate=3.772396782632615E-4]:2.488673204291E1,29[&rate=3.580628525341048E-4]:2.488673204291E1)[&rate=7.818558392965744E-4]:4.917823398287E1,(33[&rate=7.220229761159482E-4]:6.467262972859E1,13[&rate=3.18507447413342E-4]:6.467262972859E1)[&rate=4.1540512216032096E-4]:9.392336297196E0)[&rate=3.385714050504406E-4]:2.094511514665E0)[&rate=2.4998093766019327E-4]:1.165298357111E0,((10[&rate=5.05626243035042E-4]:2.665944059547E1,31[&rate=3.2863050379005774E-4]:2.665944059547E1)[&rate=3.2863050379005774E-4]:4.830475840187E1,23[&rate=4.4445865317864247E-4]:7.496419899734E1)[&rate=4.25020156889938E-4]:2.360576900214E0)[&rate=2.6289729632575387E-4]:2.311789568829E0)[&rate=5.05626243035042E-4]:6.01815362963E0,(17[&rate=8.28820550945165E-4]:7.313232637642E1,(27[&rate=5.274322834731593E-4]:2.764437834399E1,28[&rate=0.0010360536947902437]:2.764437834399E1)[&rate=5.620317834514158E-4]:4.548794803243E1)[&rate=5.866579084278446E-4]:1.25223927196E1)[&rate=0.001089585941064481]:4.263002297217E1); +tree STATE_1190000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55114.1134672862,EEF_ucld_branchRates=-266.168517335019,lnP=-55114.1134672862,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.955528338933501E-4]:7.927185116134E0,9[&rate=7.519733328436986E-4]:7.927185116134E0)[&rate=6.461522760207562E-4]:5.324892056458E0,15[&rate=4.534125669968609E-4]:1.325207717259E1)[&rate=7.226997959955858E-4]:9.951922298852E1,(14[&rate=9.296971672565506E-4]:5.276327594094E1,24[&rate=7.519733328436986E-4]:5.276327594094E1)[&rate=0.0011090867489392182]:6.000802422017E1)[&rate=3.2046664357955466E-4]:1.454468352348E1,((((((((30[&rate=6.461522760207562E-4]:4.899683065672E1,26[&rate=4.036179538448876E-4]:4.899683065672E1)[&rate=6.826504227016899E-4]:1.009070883512E1,32[&rate=3.9310734751397334E-4]:5.908753949184E1)[&rate=4.7265679824977033E-4]:7.957897172604E0,((((4[&rate=4.036179538448876E-4]:2.390393682452E0,3[&rate=6.015042745334696E-4]:2.390393682452E0)[&rate=0.0013274019851362178]:4.075436473525E-1,2[&rate=6.461522760207562E-4]:2.797937329804E0)[&rate=5.206549297434891E-4]:1.00177100356E1,5[&rate=2.8803752704152603E-4]:1.281564736541E1)[&rate=7.519733328436986E-4]:2.940241705532E0,((7[&rate=3.2046664357955466E-4]:1.261651929139E1,6[&rate=6.123133630041144E-4]:1.261651929139E1)[&rate=9.296971672565506E-4]:1.190256172828E0,1[&rate=4.918021422456336E-4]:1.380677546421E1)[&rate=7.838894061213176E-4]:1.949113606726E0)[&rate=4.138901660049568E-4]:5.128954759351E1)[&rate=1.9875597128735014E-4]:5.079992062908E0,(16[&rate=4.534125669968609E-4]:3.627673341688E1,((22[&rate=5.804630918510973E-4]:3.27427073656E0,21[&rate=0.0010233649336536229]:3.27427073656E0)[&rate=4.138901660049568E-4]:5.223968849567E0,20[&rate=7.838894061213176E-4]:8.498239586126E0)[&rate=8.805983591297407E-4]:2.777849383075E1)[&rate=0.001233954865262643]:3.584869531047E1)[&rate=8.383266320813607E-4]:1.063858719654E0,12[&rate=7.838894061213176E-4]:7.318928744701E1)[&rate=5.908940682870152E-4]:3.195858048509E0,25[&rate=8.805983591297407E-4]:7.638514549552E1)[&rate=6.701396696330817E-4]:1.413544239252E0,(((19[&rate=4.437005080379725E-4]:1.579228560064E1,18[&rate=6.701396696330817E-4]:1.579228560064E1)[&rate=4.036179538448876E-4]:5.460139143919E1,((11[&rate=4.036179538448876E-4]:2.321872483446E1,29[&rate=5.109968510682673E-4]:2.321872483446E1)[&rate=8.010477820789281E-4]:4.650537560823E1,(33[&rate=8.587430605124715E-4]:5.661503412559E1,13[&rate=4.534125669968609E-4]:5.661503412559E1)[&rate=7.370419587114917E-4]:1.310906631711E1)[&rate=3.823022381792754E-4]:6.695765971339E-1)[&rate=4.036179538448876E-4]:4.233423618679E0,((10[&rate=3.595082820994329E-4]:2.700133680796E1,31[&rate=4.7265679824977033E-4]:2.700133680796E1)[&rate=5.401728151149252E-4]:4.676908081088E1,23[&rate=5.109968510682673E-4]:7.377041761884E1)[&rate=8.383266320813607E-4]:8.566830396693E-1)[&rate=9.041431306711395E-4]:3.171589076258E0)[&rate=4.3389580233781934E-4]:2.586570867305E0,(17[&rate=8.805983591297407E-4]:6.852046175974E1,(27[&rate=6.015042745334696E-4]:2.615098140078E1,28[&rate=0.0013274019851362178]:2.615098140078E1)[&rate=5.908940682870152E-4]:4.236948035895E1)[&rate=4.63057138167151E-4]:1.186479884233E1)[&rate=0.0013274019851362178]:4.693072308252E1); +tree STATE_1200000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55151.2316194453,EEF_ucld_branchRates=-266.168517335019,lnP=-55151.2316194453,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.742147848834328E-4]:8.654863131321E0,9[&rate=8.5013931051358E-4]:8.654863131321E0)[&rate=5.984699541978092E-4]:5.769384128024E0,15[&rate=8.982758672057119E-4]:1.442424725935E1)[&rate=7.475394331075611E-4]:1.016904669744E2,(14[&rate=0.001057948865956482]:5.003893055444E1,24[&rate=7.148723294623492E-4]:5.003893055444E1)[&rate=0.0010914071803902125]:6.607578367929E1)[&rate=7.589687005131838E-4]:1.333422040832E1,((((((16[&rate=6.077333902927911E-4]:3.824853306177E1,((22[&rate=8.5013931051358E-4]:3.475810883118E0,21[&rate=8.653747072974152E-4]:3.475810883118E0)[&rate=4.931751131938314E-4]:4.682613635608E0,20[&rate=6.263603465857937E-4]:8.158424518726E0)[&rate=0.0010019127758791918]:3.009010854304E1)[&rate=9.557322875812118E-4]:3.342557761528E1,(((30[&rate=8.216392311822219E-4]:5.043747955561E1,26[&rate=8.216392311822219E-4]:5.043747955561E1)[&rate=9.557322875812118E-4]:8.702286453217E0,32[&rate=2.7581994924565393E-4]:5.913976600883E1)[&rate=4.931751131938314E-4]:9.103499900414E0,((((4[&rate=6.941989923499395E-4]:2.61777197925E0,3[&rate=4.826148781227579E-4]:2.61777197925E0)[&rate=9.352674316875089E-4]:1.824130897635E-1,2[&rate=5.70691071109208E-4]:2.800185069013E0)[&rate=5.70691071109208E-4]:8.118753954586E0,5[&rate=4.2262010895336013E-4]:1.09189390236E1)[&rate=5.33006820744146E-4]:3.863524030798E0,((7[&rate=6.742147848834328E-4]:1.008507947934E1,6[&rate=5.425588674523753E-4]:1.008507947934E1)[&rate=8.982758672057119E-4]:7.566151305941E-1,1[&rate=4.0814453852384015E-4]:1.084169460993E1)[&rate=4.931751131938314E-4]:3.940768444462E0)[&rate=6.841300900405771E-4]:5.346080285485E1)[&rate=7.707164215240392E-4]:3.430844767801E0)[&rate=0.0012334798361799092]:2.904448340772E0,12[&rate=9.778355527353512E-4]:7.457855901782E1)[&rate=6.742147848834328E-4]:1.513856281142E0,25[&rate=6.742147848834328E-4]:7.609241529896E1)[&rate=9.352674316875089E-4]:2.759517330736E0,(((19[&rate=5.520082246139555E-4]:1.703194709096E1,18[&rate=8.5013931051358E-4]:1.703194709096E1)[&rate=4.4850775525976543E-4]:5.42377660148E1,((11[&rate=5.425588674523753E-4]:2.080084256342E1,29[&rate=7.255174759651197E-4]:2.080084256342E1)[&rate=7.707164215240392E-4]:4.921396687879E1,(33[&rate=8.355865020155538E-4]:5.985316931214E1,13[&rate=4.826148781227579E-4]:5.985316931214E1)[&rate=9.161829102212616E-4]:1.016164013007E1)[&rate=5.892193011326042E-4]:1.254903663552E0)[&rate=4.717057180000362E-4]:3.735341445207E0,((10[&rate=7.475394331075611E-4]:2.365895038791E1,31[&rate=3.7394257121987966E-4]:2.365895038791E1)[&rate=5.03448183046328E-4]:4.944906649981E1,23[&rate=5.61378527197779E-4]:7.310801688772E1)[&rate=4.931751131938314E-4]:1.897037663244E0)[&rate=5.03448183046328E-4]:3.84687807873E0)[&rate=4.931751131938314E-4]:1.665128397215E0,(17[&rate=0.0013096016224798184]:6.855316799858E1,(27[&rate=5.425588674523753E-4]:2.679249436E1,28[&rate=0.0013096016224798184]:2.679249436E1)[&rate=8.216392311822219E-4]:4.176067363858E1)[&rate=7.363981835746891E-4]:1.196389302833E1)[&rate=0.0014245698118956808]:4.893187361514E1); +tree STATE_1210000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.820752460815,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.820752460815,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.133019805118262E-4]:8.330568263499E0,9[&rate=8.644694995669905E-4]:8.330568263499E0)[&rate=5.85631982298124E-4]:9.141135615336E0,15[&rate=4.4443856419774686E-4]:1.747170387883E1)[&rate=6.427903054447473E-4]:1.064734688976E2,(14[&rate=0.0015142017808350632]:5.088671067334E1,24[&rate=7.861207884588626E-4]:5.088671067334E1)[&rate=0.0011284587572499578]:7.305846210308E1)[&rate=4.3452614430466275E-4]:2.967235392064E0,((((((((30[&rate=8.040537930525356E-4]:4.839003607981E1,26[&rate=8.229895614847981E-4]:4.839003607981E1)[&rate=5.85631982298124E-4]:7.213727132008E0,32[&rate=4.739041428161422E-4]:5.560376321182E1)[&rate=3.8304010323080386E-4]:1.329241269785E1,((((4[&rate=6.940631534735494E-4]:2.307807245067E0,3[&rate=3.8304010323080386E-4]:2.307807245067E0)[&rate=9.121300656556434E-4]:3.833919919439E-1,2[&rate=3.8304010323080386E-4]:2.691199237011E0)[&rate=4.935270204716802E-4]:9.503723374764E0,5[&rate=2.9428377418232415E-4]:1.219492261177E1)[&rate=4.3452614430466275E-4]:2.106487155056E0,((7[&rate=1.8823485292091878E-4]:8.949334208196E0,6[&rate=6.427903054447473E-4]:8.949334208196E0)[&rate=6.806566266513908E-4]:1.376920905395E0,1[&rate=3.8304010323080386E-4]:1.032625511359E1)[&rate=7.528076368979361E-4]:3.97515465324E0)[&rate=4.935270204716802E-4]:5.459476614284E1)[&rate=3.8304010323080386E-4]:2.316237304932E0,(16[&rate=2.3073701202225346E-4]:3.751558098296E1,((22[&rate=0.0012611068666530745]:2.289352420862E0,21[&rate=4.04158150962714E-4]:2.289352420862E0)[&rate=6.940631534735494E-4]:5.998618876754E0,20[&rate=0.001037752225658682]:8.287971297616E0)[&rate=0.0013607468032528155]:2.922760968534E1)[&rate=7.690720105326406E-4]:3.369683223164E1)[&rate=0.001037752225658682]:2.445053427119E0,12[&rate=7.690720105326406E-4]:7.365746664172E1)[&rate=3.2362058312438845E-4]:2.373653847257E0,25[&rate=6.550564783787897E-4]:7.603112048898E1)[&rate=3.937145768377775E-4]:1.176364104165E0,(((19[&rate=9.121300656556434E-4]:1.442201540411E1,18[&rate=8.430704368143749E-4]:1.442201540411E1)[&rate=4.542908722769456E-4]:5.601778247193E1,((11[&rate=3.937145768377775E-4]:1.697187672363E1,29[&rate=7.223044532959644E-4]:1.697187672363E1)[&rate=8.040537930525356E-4]:5.13606029285E1,(33[&rate=8.229895614847981E-4]:6.146774683055E1,13[&rate=3.937145768377775E-4]:6.146774683055E1)[&rate=6.077624366440952E-4]:6.864732821583E0)[&rate=5.965903589104183E-4]:2.10731822391E0)[&rate=4.542908722769456E-4]:2.629333116707E0,((10[&rate=5.965903589104183E-4]:1.965184086013E1,31[&rate=5.333622459140468E-4]:1.965184086013E1)[&rate=5.85631982298124E-4]:5.140939749139E1,23[&rate=4.04158150962714E-4]:7.106123835152E1)[&rate=3.366722671077844E-4]:2.007892641221E0)[&rate=4.8370516464959145E-4]:4.138353600397E0)[&rate=9.684581094866725E-4]:2.085047884287E0,(17[&rate=6.940631534735494E-4]:6.902731765721E1,(27[&rate=6.550564783787897E-4]:2.974849191564E1,28[&rate=9.121300656556434E-4]:2.974849191564E1)[&rate=4.542908722769456E-4]:3.927882574157E1)[&rate=8.229895614847981E-4]:1.026521482022E1)[&rate=0.0015142017808350632]:4.761987569105E1); +tree STATE_1220000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55137.1072795152,EEF_ucld_branchRates=-266.168517335019,lnP=-55137.1072795152,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.652019589964121E-4]:7.252753782705E0,9[&rate=5.310142203528704E-4]:7.252753782705E0)[&rate=2.7384943609892975E-4]:7.960564916197E0,15[&rate=4.2971539613239105E-4]:1.52133186989E1)[&rate=0.001034653151050146]:1.03934086157E2,(14[&rate=6.275641765280305E-4]:4.911109363017E1,24[&rate=8.157919588043131E-4]:4.911109363017E1)[&rate=6.275641765280305E-4]:7.003631122576E1)[&rate=3.554082274320518E-4]:8.433773412103E0,((((((((30[&rate=6.655274297158355E-4]:4.743679984031E1,26[&rate=3.554082274320518E-4]:4.743679984031E1)[&rate=6.655274297158355E-4]:1.152800932012E1,32[&rate=4.2971539613239105E-4]:5.896480916043E1)[&rate=5.508553751752345E-4]:7.934241365828E0,((((4[&rate=5.023877316599368E-4]:2.193106626413E0,3[&rate=7.572077879037006E-4]:2.193106626413E0)[&rate=4.3868659995752537E-4]:5.682226812028E-1,2[&rate=5.408476251939638E-4]:2.761329307616E0)[&rate=3.652019589964121E-4]:8.869310106472E0,5[&rate=3.1283005527037015E-4]:1.163063941409E1)[&rate=3.554082274320518E-4]:2.212545360008E0,((7[&rate=5.408476251939638E-4]:8.771072474661E0,6[&rate=9.903436348533206E-4]:8.771072474661E0)[&rate=3.652019589964121E-4]:1.492403736547E0,1[&rate=4.026198642470861E-4]:1.026347621121E1)[&rate=3.554082274320518E-4]:3.579708562888E0)[&rate=6.275641765280305E-4]:5.305586575216E1)[&rate=1.7602950350788991E-4]:2.925057380587E0,(16[&rate=4.207269036411448E-4]:3.791769887732E1,((22[&rate=0.0011548584912074438]:2.071046630595E0,21[&rate=4.3868659995752537E-4]:2.071046630595E0)[&rate=4.026198642470861E-4]:6.066463926569E0,20[&rate=4.7473841342750436E-4]:8.137510557163E0)[&rate=0.0013838364661039504]:2.978018832015E1)[&rate=0.0013838364661039504]:3.190640902953E1)[&rate=6.042162472888422E-4]:1.428360730748E0,12[&rate=9.190939902796487E-4]:7.125246863759E1)[&rate=7.399754655573026E-4]:3.189233510893E0,25[&rate=7.754774301613059E-4]:7.444170214849E1)[&rate=5.821188373660625E-4]:4.679052163752E-1,(((19[&rate=7.399754655573026E-4]:1.793832942114E1,18[&rate=3.1283005527037015E-4]:1.793832942114E1)[&rate=5.310142203528704E-4]:5.141525519247E1,((11[&rate=3.652019589964121E-4]:1.662289615311E1,29[&rate=7.94941085193674E-4]:1.662289615311E1)[&rate=0.0012450593268095436]:5.092868972726E1,(33[&rate=8.382721571796324E-4]:5.970321322293E1,13[&rate=4.656685065387099E-4]:5.970321322293E1)[&rate=3.7478100835141784E-4]:7.848372657437E0)[&rate=7.08128762174361E-4]:1.80199873324E0)[&rate=6.52427132114871E-4]:2.38168456188E0,((10[&rate=7.08128762174361E-4]:2.420831777324E1,31[&rate=5.310142203528704E-4]:2.420831777324E1)[&rate=3.7478100835141784E-4]:4.712520710659E1,23[&rate=4.4765821540377997E-4]:7.133352487982E1)[&rate=5.93025670639827E-4]:4.017442956671E-1)[&rate=2.1529192848028029E-4]:3.174338189374E0)[&rate=7.399754655573026E-4]:3.033203992796E0,(17[&rate=8.382721571796324E-4]:7.027418669937E1,(27[&rate=4.117020290474794E-4]:3.200912486759E1,28[&rate=7.572077879037006E-4]:3.200912486759E1)[&rate=7.399754655573026E-4]:3.826506183178E1)[&rate=6.933166094823062E-4]:7.668624658287E0)[&rate=0.001034653151050146]:4.963836691038E1); +tree STATE_1230000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55100.41569701832,EEF_ucld_branchRates=-266.168517335019,lnP=-55100.41569701832,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.008944245009175E-4]:9.011731128748E0,9[&rate=4.7760444139708475E-4]:9.011731128748E0)[&rate=6.318912100450975E-4]:6.852797305253E0,15[&rate=7.883889047153635E-4]:1.5864528434E1)[&rate=6.772497006034407E-4]:9.544607650725E1,(14[&rate=0.0014042872210225286]:4.396093360909E1,24[&rate=0.0014042872210225286]:4.396093360909E1)[&rate=0.0010739687739907719]:6.734967133216E1)[&rate=8.625945688028441E-4]:1.66136261398E1,(((25[&rate=7.57045259065675E-4]:7.447597201015E1,(((16[&rate=2.0971469470177067E-4]:4.162210325784E1,((22[&rate=0.0012738900649748306]:3.291519265502E0,21[&rate=4.210045171071777E-4]:3.291519265502E0)[&rate=4.210045171071777E-4]:4.604277439306E0,20[&rate=5.516287929507339E-4]:7.895796704808E0)[&rate=8.625945688028441E-4]:3.372630655303E1)[&rate=0.0010739687739907719]:2.865880217384E1,(((30[&rate=7.883889047153635E-4]:4.792330372812E1,26[&rate=4.959658652683034E-4]:4.792330372812E1)[&rate=7.019559486150385E-4]:9.591020277174E0,32[&rate=4.591107021816338E-4]:5.751432400529E1)[&rate=6.772497006034407E-4]:6.117551594769E0,((((4[&rate=5.805525893150549E-4]:2.684446854834E0,3[&rate=7.57045259065675E-4]:2.684446854834E0)[&rate=2.525037919262159E-4]:1.689639671668E-1,2[&rate=3.5638774068260217E-4]:2.853410822001E0)[&rate=4.497626059181228E-4]:8.264242173314E0,5[&rate=3.1522660642978805E-4]:1.111765299531E1)[&rate=5.143388293491342E-4]:1.936719305147E0,((7[&rate=4.210045171071777E-4]:8.678776171308E0,6[&rate=9.628498444156778E-4]:8.678776171308E0)[&rate=3.904182455614432E-4]:1.170353338113E0,1[&rate=5.707892721320559E-4]:9.849129509421E0)[&rate=3.5638774068260217E-4]:3.205242791041E0)[&rate=5.904598204204804E-4]:5.05775032996E1)[&rate=7.019559486150385E-4]:6.649029831615E0)[&rate=5.707892721320559E-4]:2.589164298629E0,12[&rate=8.053050146780069E-4]:7.28700697303E1)[&rate=4.867922470162448E-4]:1.605902279844E0)[&rate=4.110712739054605E-4]:1.935402527626E0,(((19[&rate=8.232067410795184E-4]:2.11488487283E1,18[&rate=6.894051703435004E-4]:2.11488487283E1)[&rate=4.008944245009175E-4]:5.102939776355E1,((11[&rate=4.008944245009175E-4]:1.692208855192E1,29[&rate=6.539795303115497E-4]:1.692208855192E1)[&rate=8.053050146780069E-4]:5.363350944705E1,(33[&rate=5.904598204204804E-4]:5.67704460411E1,13[&rate=4.6838394932865616E-4]:5.67704460411E1)[&rate=6.428015592967512E-4]:1.378515195787E1)[&rate=9.082256075194421E-4]:1.622648492882E0)[&rate=4.497626059181228E-4]:8.371776944209E-1,((10[&rate=7.57045259065675E-4]:2.837571125358E1,31[&rate=4.3073972863332606E-4]:2.837571125358E1)[&rate=4.7760444139708475E-4]:4.341812300126E1,23[&rate=8.232067410795184E-4]:7.179383425484E1)[&rate=5.707892721320559E-4]:1.221589931438E0)[&rate=7.149440578332835E-4]:3.3959503515E0)[&rate=5.235703285594263E-4]:3.71679141492E0,(17[&rate=8.625945688028441E-4]:7.287253464141E1,(27[&rate=4.008944245009175E-4]:2.942346574355E1,28[&rate=0.0012738900649748306]:2.942346574355E1)[&rate=7.883889047153635E-4]:4.344906889786E1)[&rate=4.867922470162448E-4]:7.255631311283E0)[&rate=0.0010739687739907719]:4.779606512836E1); +tree STATE_1240000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55154.96480420865,EEF_ucld_branchRates=-266.168517335019,lnP=-55154.96480420865,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.236430147953878E-4]:9.081830157791E0,9[&rate=6.642770055444398E-4]:9.081830157791E0)[&rate=0.0012260362185697376]:7.195741408598E0,15[&rate=7.74016411753719E-4]:1.627757156639E1)[&rate=6.8597153153547E-4]:1.032897143971E2,(14[&rate=0.0015904640502024516]:4.777149694677E1,24[&rate=0.0012260362185697376]:4.777149694677E1)[&rate=8.043336851691173E-4]:7.179578901677E1)[&rate=5.953999412859183E-4]:8.482002154254E0,(((25[&rate=6.8597153153547E-4]:7.555975325831E1,(((16[&rate=6.538338252137882E-4]:3.901988434085E1,((22[&rate=4.976111737936231E-4]:3.244587378836E0,21[&rate=4.236430147953878E-4]:3.244587378836E0)[&rate=8.043336851691173E-4]:5.340104330125E0,20[&rate=4.431370103982465E-4]:8.584691708962E0)[&rate=8.567799127855128E-4]:3.043519263189E1)[&rate=0.0012260362185697376]:3.353306874053E1,(((30[&rate=5.239227182104271E-4]:4.841918277636E1,26[&rate=6.336326304103354E-4]:4.841918277636E1)[&rate=4.708843744290644E-4]:1.087269634574E1,32[&rate=7.334657416740047E-4]:5.92918791221E1)[&rate=5.953999412859183E-4]:1.083007777411E1,((((4[&rate=7.887908333773151E-4]:2.523044141906E0,3[&rate=7.089390576513946E-4]:2.523044141906E0)[&rate=9.478945548105896E-4]:1.270485943449E-1,2[&rate=5.953999412859183E-4]:2.650092736251E0)[&rate=9.76901870658232E-4]:7.481155692003E0,5[&rate=5.064030356517215E-4]:1.013124842825E1)[&rate=4.431370103982465E-4]:2.867023537576E0,((7[&rate=4.1345666070553264E-4]:9.601178158637E0,6[&rate=8.381815768365961E-4]:9.601178158637E0)[&rate=4.708843744290644E-4]:1.486206579904E0,1[&rate=5.861902627863762E-4]:1.108738473854E1)[&rate=4.6178505883682033E-4]:1.910887227288E0)[&rate=4.431370103982465E-4]:5.712368493039E1)[&rate=3.029513096795435E-4]:2.430996185165E0)[&rate=7.599198612072052E-4]:1.78294054256E0,12[&rate=7.599198612072052E-4]:7.433589362394E1)[&rate=4.236430147953878E-4]:1.223859634372E0)[&rate=5.064030356517215E-4]:1.297497595915E0,(((19[&rate=4.525467299206954E-4]:1.647764506117E1,18[&rate=6.972798663147471E-4]:1.647764506117E1)[&rate=5.326832109656768E-4]:5.390207500746E1,((11[&rate=4.236430147953878E-4]:1.732544632054E1,29[&rate=8.983511778391508E-4]:1.732544632054E1)[&rate=8.767506253104426E-4]:5.205333110894E1,(33[&rate=8.207534240615259E-4]:5.969048014599E1,13[&rate=4.976111737936231E-4]:5.969048014599E1)[&rate=5.502814382259049E-4]:9.688297283483E0)[&rate=3.9184662075042426E-4]:1.000942639153E0)[&rate=6.972798663147471E-4]:3.281228764161E0,((10[&rate=6.047325805277998E-4]:2.953596139349E1,31[&rate=6.047325805277998E-4]:2.953596139349E1)[&rate=3.9184662075042426E-4]:4.287810195197E1,23[&rate=4.887742735664344E-4]:7.241406334546E1)[&rate=3.3965264164962766E-4]:1.24688548733E0)[&rate=2.3353516106382796E-4]:3.196302021438E0)[&rate=7.464247140967582E-4]:2.70097044311E0,(17[&rate=7.887908333773151E-4]:7.514205453182E1,(27[&rate=4.1345666070553264E-4]:3.172839373438E1,28[&rate=0.0010479915943189518]:3.172839373438E1)[&rate=8.567799127855128E-4]:4.341366079743E1)[&rate=5.680790191740368E-4]:4.416166765523E0)[&rate=0.0010479915943189518]:4.849106682045E1); +tree STATE_1250000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.34858739371,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.34858739371,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.7593390412241615E-4]:1.128453767221E1,9[&rate=5.120167544203494E-4]:1.128453767221E1)[&rate=2.4612679596302926E-4]:7.045435707993E0,15[&rate=4.7593390412241615E-4]:1.83299733802E1)[&rate=0.0010131341646191455]:9.631206797761E1,(14[&rate=0.0015436403272377297]:4.331503428449E1,24[&rate=9.679326360199737E-4]:4.331503428449E1)[&rate=6.81885692316831E-4]:7.132700707332E1)[&rate=0.0010648792922968117]:1.070241036158E1,(((25[&rate=9.679326360199737E-4]:7.144568539248E1,(12[&rate=9.472439748438469E-4]:7.144446814974E1,((16[&rate=7.058084871821155E-4]:3.534647745666E1,((22[&rate=5.463583225712241E-4]:3.439102314845E0,21[&rate=4.36544626390831E-4]:3.439102314845E0)[&rate=6.701720005658637E-4]:4.208504858606E0,20[&rate=4.501853467915935E-4]:7.647607173451E0)[&rate=0.0015436403272377297]:2.769887028321E1)[&rate=8.910756944762019E-4]:3.282809417544E1,(((30[&rate=9.276186306027548E-4]:4.774944856688E1,26[&rate=4.88232496343585E-4]:4.774944856688E1)[&rate=0.0014384415830891151]:9.175275932769E0,32[&rate=3.726398863819391E-4]:5.692472449965E1)[&rate=5.236027179390186E-4]:7.912332098384E0,((((4[&rate=8.263487552781389E-4]:2.004785910254E0,3[&rate=4.7593390412241615E-4]:2.004785910254E0)[&rate=7.69532735662572E-4]:6.185013296545E-1,2[&rate=6.585972701545557E-4]:2.623287239909E0)[&rate=7.305318540798441E-4]:8.404952747051E0,5[&rate=3.2832269930965953E-4]:1.102823998696E1)[&rate=7.83153712212516E-4]:3.396271188542E0,((7[&rate=6.81885692316831E-4]:7.51175898561E0,6[&rate=8.263487552781389E-4]:7.51175898561E0)[&rate=6.93757782321898E-4]:2.098851533011E0,1[&rate=5.799016798643577E-4]:9.610610518621E0)[&rate=4.88232496343585E-4]:4.813900656881E0)[&rate=5.236027179390186E-4]:5.041254542253E1)[&rate=5.120167544203494E-4]:3.337515034073E0)[&rate=6.245198790139762E-4]:3.26989651764E0)[&rate=9.472439748438469E-4]:1.217242741248E-3)[&rate=0.0010131341646191455]:3.24372793639E0,(((19[&rate=0.0012003649119132476]:1.526468694514E1,18[&rate=0.0010380549488153631]:1.526468694514E1)[&rate=4.36544626390831E-4]:5.402445735164E1,((11[&rate=5.910254498651832E-4]:1.558965627505E1,29[&rate=0.0012974541230855654]:1.558965627505E1)[&rate=4.501853467915935E-4]:5.172020186376E1,(33[&rate=8.263487552781389E-4]:6.126005235008E1,13[&rate=6.133150873221203E-4]:6.126005235008E1)[&rate=6.93757782321898E-4]:6.049805788738E0)[&rate=8.575132578767027E-4]:1.979286157971E0)[&rate=0.002059150678896681]:2.051719868671E0,((10[&rate=5.002418995439331E-4]:2.530851066076E1,31[&rate=5.687644294908693E-4]:2.530851066076E1)[&rate=5.350386726772109E-4]:4.599013925146E1,23[&rate=6.357896128556575E-4]:7.129864991222E1)[&rate=0.0010939666376536962]:4.221425323881E-2)[&rate=8.739622191135632E-4]:3.348549163419E0)[&rate=8.115228610530668E-4]:5.183310901283E0,(17[&rate=9.679326360199737E-4]:7.294992952097E1,(27[&rate=8.739622191135632E-4]:2.715851181257E1,28[&rate=0.0011609629998015295]:2.715851181257E1)[&rate=5.687644294908693E-4]:4.57914177084E1)[&rate=9.089311325336518E-4]:6.922794709184E0)[&rate=0.001360058806164613]:4.547172748924E1); +tree STATE_1260000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55141.399120294765,EEF_ucld_branchRates=-266.168517335019,lnP=-55141.399120294765,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.941800920339905E-4]:1.087028189343E1,9[&rate=8.086612970512773E-4]:1.087028189343E1)[&rate=4.199877335378056E-4]:9.474086365592E0,15[&rate=5.833981684033211E-4]:2.034436825902E1)[&rate=7.913883447819794E-4]:9.536104422672E1,(14[&rate=0.0012879466905486238]:4.730263684633E1,24[&rate=0.001154431085021455]:4.730263684633E1)[&rate=7.15321929837261E-4]:6.840277563941E1)[&rate=4.0929855476120285E-4]:1.272674920785E1,(((25[&rate=7.15321929837261E-4]:7.315935132499E1,(12[&rate=8.879685920476361E-4]:7.039972548785E1,((((30[&rate=9.111586446827919E-4]:4.537902753207E1,26[&rate=9.111586446827919E-4]:4.537902753207E1)[&rate=8.879685920476361E-4]:1.017202552694E1,32[&rate=8.268239385221152E-4]:5.5551053059E1)[&rate=2.895585035961266E-4]:9.135004216412E0,((((4[&rate=4.0929855476120285E-4]:2.522000764298E0,2[&rate=7.017135378855026E-4]:2.522000764298E0)[&rate=8.268239385221152E-4]:3.231372224032E-1,3[&rate=0.0018844575396291209]:2.845137986701E0)[&rate=5.833981684033211E-4]:8.997521519166E0,5[&rate=4.611769077940615E-4]:1.184265950587E1)[&rate=5.213539538927427E-4]:3.345258742519E0,((7[&rate=7.017135378855026E-4]:9.691185675652E0,6[&rate=5.012745006207189E-4]:9.691185675652E0)[&rate=7.15321929837261E-4]:1.12285913814E0,1[&rate=3.871402039288855E-4]:1.081404481379E1)[&rate=1.9790093890905075E-4]:4.373873434594E0)[&rate=4.199877335378056E-4]:4.949813902703E1)[&rate=5.941800920339905E-4]:4.286790562174E0,(16[&rate=3.6348050270781446E-4]:3.540173042955E1,((22[&rate=3.7554156502160775E-4]:3.214520050448E0,21[&rate=2.6866723768739076E-4]:3.214520050448E0)[&rate=6.632546885688684E-4]:4.718993417536E0,20[&rate=4.4082495143545747E-4]:7.933513467984E0)[&rate=0.0012879466905486238]:2.746821696156E1)[&rate=0.0010629948792638736]:3.357111740804E1)[&rate=7.591248227350659E-4]:1.426877650257E0)[&rate=4.812668348888244E-4]:2.759625837142E0)[&rate=8.879685920476361E-4]:1.481940541279E0,(((19[&rate=6.392476641596533E-4]:1.287304307766E1,18[&rate=4.510463462069538E-4]:1.287304307766E1)[&rate=5.213539538927427E-4]:5.451292346235E1,((11[&rate=4.304833437092851E-4]:1.458235755595E1,29[&rate=7.913883447819794E-4]:1.458235755595E1)[&rate=8.459954800935214E-4]:5.041583911222E1,(33[&rate=0.0010629948792638736]:5.808066357697E1,13[&rate=5.416450353187968E-4]:5.808066357697E1)[&rate=8.459954800935214E-4]:6.917533091207E0)[&rate=3.9836857401362045E-4]:2.387769871837E0)[&rate=0.0011051988510690563]:4.271561415849E0,((10[&rate=6.051357316258459E-4]:3.309610519748E1,31[&rate=4.304833437092851E-4]:3.309610519748E1)[&rate=5.941800920339905E-4]:3.805705984934E1,23[&rate=4.510463462069538E-4]:7.115316504682E1)[&rate=4.812668348888244E-4]:5.043629090341E-1)[&rate=5.622816134651713E-4]:2.98376391041E0)[&rate=4.912708756949679E-4]:4.417680134818E0,(17[&rate=7.591248227350659E-4]:7.175999238004E1,(27[&rate=3.7554156502160775E-4]:2.884418047082E1,28[&rate=0.0013880959942751724]:2.884418047082E1)[&rate=7.749046669982849E-4]:4.291581190921E1)[&rate=3.7554156502160775E-4]:7.298979621047E0)[&rate=9.633097070314825E-4]:4.937318969251E1); +tree STATE_1270000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55132.34321308806,EEF_ucld_branchRates=-266.168517335019,lnP=-55132.34321308806,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.792016848731595E-4]:9.842673647933E0,9[&rate=0.0011257919442460489]:9.842673647933E0)[&rate=7.227575423510512E-4]:6.991694760296E0,15[&rate=7.542176237838972E-4]:1.683436840823E1)[&rate=8.261531106116021E-4]:1.026377856543E2,(14[&rate=0.0010399834146125]:4.910876519242E1,24[&rate=8.914622767746791E-4]:4.910876519242E1)[&rate=5.808115754240077E-4]:7.036338887014E1)[&rate=3.5607473277891844E-4]:1.031908915267E1,(((25[&rate=5.808115754240077E-4]:7.292554220203E1,((12[&rate=9.163111749771631E-4]:6.85830449535E1,((16[&rate=4.1188677271363785E-4]:3.28079798237E1,((22[&rate=7.542176237838972E-4]:2.568414592238E0,21[&rate=6.935455940794962E-4]:2.568414592238E0)[&rate=2.698482976811609E-4]:7.551684453772E0,20[&rate=7.542176237838972E-4]:1.012009904601E1)[&rate=0.0013253464711003042]:2.268788077769E1)[&rate=0.0013253464711003042]:3.394036950344E1,((30[&rate=7.884491624313214E-4]:4.927026460483E1,26[&rate=6.935455940794962E-4]:4.927026460483E1)[&rate=8.465969755576206E-4]:8.487558449255E0,32[&rate=3.9030680715321887E-4]:5.775782305409E1)[&rate=3.9030680715321887E-4]:8.99052627305E0)[&rate=4.3290097739798845E-4]:1.834695626364E0)[&rate=2.4913693642455694E-4]:1.856365554425E0,((((4[&rate=5.476201828961527E-4]:1.55550251138E0,2[&rate=4.948305179919384E-4]:1.55550251138E0)[&rate=0.001988820846835081]:8.775165247689E-1,3[&rate=3.9030680715321887E-4]:2.433019036149E0)[&rate=8.465969755576206E-4]:8.784164979891E0,5[&rate=6.038820978058286E-4]:1.121718401604E1)[&rate=6.279066583106705E-4]:2.54074296033E0,((7[&rate=4.224471612700787E-4]:9.655401407029E0,6[&rate=8.914622767746791E-4]:9.655401407029E0)[&rate=4.741900451355997E-4]:1.142001750097E0,1[&rate=3.4389249293692765E-4]:1.079740315713E1)[&rate=0.0011257919442460489]:2.960523819243E0)[&rate=5.585215794302609E-4]:5.668148353156E1)[&rate=8.068141122266289E-4]:2.486131694108E0)[&rate=4.3290097739798845E-4]:1.774379835314E0,(((19[&rate=4.741900451355997E-4]:1.328936133427E1,18[&rate=6.935455940794962E-4]:1.328936133427E1)[&rate=4.011863411182195E-4]:5.686197575716E1,((33[&rate=8.465969755576206E-4]:6.26502613837E1,13[&rate=4.011863411182195E-4]:6.26502613837E1)[&rate=2.226919614766592E-4]:5.943014079757E0,(11[&rate=5.262132704505441E-4]:1.818633926603E1,29[&rate=5.808115754240077E-4]:1.818633926603E1)[&rate=7.542176237838972E-4]:5.040693619742E1)[&rate=5.156726423139198E-4]:1.558061627975E0)[&rate=4.3290097739798845E-4]:1.514833264136E0,((10[&rate=7.078980583701457E-4]:3.040856492385E1,31[&rate=3.67814452645611E-4]:3.040856492385E1)[&rate=3.5607473277891844E-4]:4.004894035785E1,23[&rate=4.5360247192260006E-4]:7.04575052817E1)[&rate=8.914622767746791E-4]:1.208665073862E0)[&rate=3.4389249293692765E-4]:3.033751681784E0)[&rate=4.844940753298634E-4]:2.396330550121E0,(17[&rate=0.0010800051900569539]:7.112218455816E1,(27[&rate=5.695790677333439E-4]:2.852649273496E1,28[&rate=0.0010044028855206808]:2.852649273496E1)[&rate=6.661787418863078E-4]:4.259569182319E1)[&rate=8.683029239028272E-4]:5.974068029314E0)[&rate=0.0014355257562238314]:5.269499062775E1); +tree STATE_1280000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55155.12108878095,EEF_ucld_branchRates=-266.168517335019,lnP=-55155.12108878095,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.965473671098613E-4]:9.376322470182E0,9[&rate=3.590276057316461E-4]:9.376322470182E0)[&rate=9.054709824468917E-4]:6.469776053343E0,15[&rate=5.272702023939622E-4]:1.584609852353E1)[&rate=8.598998552651236E-4]:1.057745364762E2,(14[&rate=0.0010531707931961342]:5.005694162347E1,24[&rate=9.305460338742392E-4]:5.005694162347E1)[&rate=5.497656685233436E-4]:7.156369337624E1)[&rate=7.823304349236815E-4]:4.657891270079E0,(((25[&rate=5.965473671098613E-4]:7.464025555898E1,(12[&rate=8.003473323399923E-4]:7.203377539357E1,((((((4[&rate=5.612084788431009E-4]:1.508534591396E0,2[&rate=4.833218438505375E-4]:1.508534591396E0)[&rate=4.1759194456558334E-4]:1.322893084915E0,3[&rate=2.478384554404229E-4]:2.831427676311E0)[&rate=3.590276057316461E-4]:9.716418869645E0,5[&rate=2.692524744390098E-4]:1.254784654596E1)[&rate=5.845793505751545E-4]:2.833434222686E0,((7[&rate=4.287081862056566E-4]:9.744407259853E0,6[&rate=8.598998552651236E-4]:9.744407259853E0)[&rate=3.949098479143762E-4]:6.471672216971E-1,1[&rate=4.3972258629015095E-4]:1.039157448155E1)[&rate=2.478384554404229E-4]:4.989706287091E0)[&rate=4.833218438505375E-4]:5.418497640873E1,((30[&rate=6.87779193857849E-4]:4.732888697958E1,26[&rate=7.650709178765075E-4]:4.732888697958E1)[&rate=7.325292880542264E-4]:1.363303039147E1,32[&rate=4.3972258629015095E-4]:6.096191737106E1)[&rate=4.833218438505375E-4]:8.604339806315E0)[&rate=4.287081862056566E-4]:7.552834129085E-1,(16[&rate=6.211557987022819E-4]:3.416478187443E1,((22[&rate=7.823304349236815E-4]:2.577130066233E0,21[&rate=8.819924612456995E-4]:2.577130066233E0)[&rate=0.0021398746754286435]:5.795258692735E0,20[&rate=4.506654152537393E-4]:8.372388758968E0)[&rate=0.0015256606874658378]:2.579239311546E1)[&rate=0.0014043227981303346]:3.615675871585E1)[&rate=8.819924612456995E-4]:1.712234803291E0)[&rate=3.8325584682593727E-4]:2.606480165412E0)[&rate=7.171226187084766E-4]:5.777663303101E-1,(((19[&rate=0.0010919131215101226]:1.469651810415E1,18[&rate=0.0011355511340864423]:1.469651810415E1)[&rate=3.590276057316461E-4]:5.739232066762E1,((33[&rate=7.171226187084766E-4]:6.25106308378E1,13[&rate=3.949098479143762E-4]:6.25106308378E1)[&rate=7.823304349236815E-4]:5.081940457182E0,(11[&rate=8.819924612456995E-4]:2.028558237217E1,29[&rate=3.949098479143762E-4]:2.028558237217E1)[&rate=7.823304349236815E-4]:4.730698892282E1)[&rate=4.06339261619816E-4]:4.496267476783E0)[&rate=0.0011355511340864423]:1.421340537278E0,((10[&rate=6.468196112908974E-4]:2.827356532015E1,31[&rate=3.4628889502194825E-4]:2.827356532015E1)[&rate=5.728065141729884E-4]:4.496006147954E1,23[&rate=5.845793505751545E-4]:7.323362679968E1)[&rate=4.942252796083144E-4]:2.765525093636E-1)[&rate=3.713191711741876E-4]:1.707842580247E0)[&rate=9.574777390451138E-4]:5.318626359918E0,(17[&rate=9.054709824468917E-4]:7.417093984392E1,(27[&rate=7.484926471383439E-4]:3.06653119137E1,28[&rate=0.0010183082847891255]:3.06653119137E1)[&rate=9.305460338742392E-4]:4.350562793022E1)[&rate=3.4628889502194825E-4]:6.365708405294E0)[&rate=0.0015256606874658378]:4.574187802057E1); +tree STATE_1290000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55144.55479300203,EEF_ucld_branchRates=-266.168517335019,lnP=-55144.55479300203,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.039432217924652E-4]:9.396491810929E0,9[&rate=6.087474740306766E-4]:9.396491810929E0)[&rate=2.952048641482632E-4]:1.017067187296E1,15[&rate=4.8024592124351026E-4]:1.956716368389E1)[&rate=8.810150087191867E-4]:9.287141939955E1,(14[&rate=0.0010140022869874429]:4.81949816113E1,24[&rate=0.0011381071411997016]:4.81949816113E1)[&rate=6.955218332899894E-4]:6.424360147214E1)[&rate=0.0012709979502969477]:1.360932213935E1,((((12[&rate=8.447408867687516E-4]:6.858684258418E1,((((((4[&rate=4.558702147762144E-4]:1.752816977588E0,2[&rate=9.645652670283671E-4]:1.752816977588E0)[&rate=0.0010413486866019549]:4.048374619927E-1,3[&rate=4.1711349681696055E-4]:2.15765443958E0)[&rate=6.697862050415918E-4]:1.226347080273E1,5[&rate=4.8024592124351026E-4]:1.442112524232E1)[&rate=0.0016081030737343806]:1.238258794156E0,((7[&rate=4.3041782997860445E-4]:8.611959542189E0,6[&rate=5.735720407549848E-4]:8.611959542189E0)[&rate=6.327026470944442E-4]:7.879668214448E-1,1[&rate=6.697862050415918E-4]:9.399926363634E0)[&rate=7.952546310964095E-4]:6.259457672837E0)[&rate=5.039432217924652E-4]:5.004670354465E1,((30[&rate=6.572443298341171E-4]:4.675128054603E1,26[&rate=8.111790612640112E-4]:4.675128054603E1)[&rate=9.206583783890526E-4]:9.876370676556E0,32[&rate=4.032927826023763E-4]:5.662765122258E1)[&rate=4.681644760669467E-4]:9.078436358535E0)[&rate=0.0010140022869874429]:2.115217798816E0,(16[&rate=5.15630836107543E-4]:3.287667069061E1,((22[&rate=0.0012209296385452346]:1.779964283452E0,21[&rate=4.1711349681696055E-4]:1.779964283452E0)[&rate=4.1711349681696055E-4]:6.943626078218E0,20[&rate=0.0010140022869874429]:8.72359036167E0)[&rate=0.002204751392490196]:2.415308032894E1)[&rate=8.625022924798325E-4]:3.494463468932E1)[&rate=0.0016081030737343806]:7.655372042489E-1)[&rate=3.88818351550382E-4]:2.183389596041E0,25[&rate=7.648609189438319E-4]:7.077023218022E1)[&rate=4.558702147762144E-4]:2.37656867325E0,(((19[&rate=6.448901290833521E-4]:1.438844569382E1,18[&rate=8.625022924798325E-4]:1.438844569382E1)[&rate=4.032927826023763E-4]:5.599522601485E1,((11[&rate=2.952048641482632E-4]:2.083834196275E1,29[&rate=6.327026470944442E-4]:2.083834196275E1)[&rate=9.645652670283671E-4]:4.788044665436E1,(33[&rate=0.0011381071411997016]:5.941007681432E1,13[&rate=5.61970962757621E-4]:5.941007681432E1)[&rate=8.111790612640112E-4]:9.308711802779E0)[&rate=9.645652670283671E-4]:1.664883091574E0)[&rate=9.206583783890526E-4]:1.376996615387E0,((10[&rate=4.921593858346972E-4]:2.500014685199E1,31[&rate=8.447408867687516E-4]:2.500014685199E1)[&rate=5.503983624823375E-4]:4.53196110857E1,23[&rate=6.572443298341171E-4]:7.031975793769E1)[&rate=3.1892843975205303E-4]:1.440910386371E0)[&rate=7.222882387406479E-4]:1.38613252941E0)[&rate=4.4330969163319534E-4]:4.891556480619E0,(17[&rate=7.952546310964095E-4]:6.836064350579E1,(27[&rate=5.503983624823375E-4]:3.296519522956E1,28[&rate=0.0011029279373527803]:3.296519522956E1)[&rate=8.625022924798325E-4]:3.539544827623E1)[&rate=0.0010140022869874429]:9.677713828305E0)[&rate=0.00148848390500147]:4.800954788869E1); +tree STATE_1300000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55116.22950707878,EEF_ucld_branchRates=-266.168517335019,lnP=-55116.22950707878,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.59735807001709E-4]:1.170291517371E1,9[&rate=7.168500197365672E-4]:1.170291517371E1)[&rate=7.306514125259347E-4]:7.245158817852E0,15[&rate=3.8641560632117017E-4]:1.894807399156E1)[&rate=7.035507578406755E-4]:9.87960306665E1,(14[&rate=0.0012931985098617196]:4.931201626758E1,24[&rate=8.474590178632765E-4]:4.931201626758E1)[&rate=7.756779709608263E-4]:6.843208839048E1)[&rate=4.8408530686537316E-4]:1.137199936049E1,((((12[&rate=8.474590178632765E-4]:7.440680530829E1,((((30[&rate=9.420511856949852E-4]:5.056251192327E1,26[&rate=4.369256913051159E-4]:5.056251192327E1)[&rate=6.782672665162354E-4]:1.150901788009E1,32[&rate=3.970096483321121E-4]:6.207152980337E1)[&rate=3.7545477211336446E-4]:8.296819965008E0,((((4[&rate=6.907043131646341E-4]:2.074934020848E0,3[&rate=4.93405319810432E-4]:2.074934020848E0)[&rate=4.8408530686537316E-4]:2.048288274124E-1,2[&rate=4.073066788266469E-4]:2.27976284826E0)[&rate=3.7545477211336446E-4]:1.353277673923E1,5[&rate=5.998826981909519E-4]:1.581253958749E1)[&rate=4.46503743001643E-4]:2.15431593424E0,((7[&rate=3.970096483321121E-4]:1.070136831828E1,6[&rate=8.278997042581597E-4]:1.070136831828E1)[&rate=6.430474228787698E-4]:1.921643920579E0,1[&rate=4.46503743001643E-4]:1.262301223886E1)[&rate=4.2722278003609935E-4]:5.343843282867E0)[&rate=5.79508076867139E-4]:5.240149424665E1)[&rate=4.173624987035051E-4]:1.938695523069E0,(16[&rate=5.695552363413548E-4]:3.488977289377E1,((22[&rate=9.420511856949852E-4]:2.18156383859E0,21[&rate=7.450113674476805E-4]:2.18156383859E0)[&rate=5.309171753265536E-4]:7.520164381051E0,20[&rate=7.306514125259347E-4]:9.701728219641E0)[&rate=0.0017268867462233478]:2.518804467413E1)[&rate=7.306514125259347E-4]:3.741727239767E1)[&rate=0.0012931985098617196]:2.099760016842E0)[&rate=3.7545477211336446E-4]:1.117717900719E0,25[&rate=7.756779709608263E-4]:7.552452320901E1)[&rate=8.095143414151853E-4]:1.384653051417E0,(((19[&rate=6.319009947547549E-4]:1.360723137119E1,18[&rate=8.683815700325703E-4]:1.360723137119E1)[&rate=3.7545477211336446E-4]:6.037779775219E1,((11[&rate=5.59735807001709E-4]:2.282814073323E1,29[&rate=5.695552363413548E-4]:2.282814073323E1)[&rate=9.715965632520719E-4]:5.035633888525E1,(33[&rate=8.278997042581597E-4]:6.000004955216E1,13[&rate=3.3931420866572E-4]:6.000004955216E1)[&rate=4.2722278003609935E-4]:1.318443006632E1)[&rate=2.735060476384681E-4]:8.005495049095E-1)[&rate=2.735060476384681E-4]:1.332986213884E0,((10[&rate=7.168500197365672E-4]:2.466648572082E1,31[&rate=5.89611292859205E-4]:2.466648572082E1)[&rate=2.9358419904410515E-4]:4.970366738365E1,23[&rate=4.653946719758301E-4]:7.437015310447E1)[&rate=6.782672665162354E-4]:9.478622327999E-1)[&rate=4.93405319810432E-4]:1.591160923149E0)[&rate=9.420511856949852E-4]:1.938249884277E0,(17[&rate=8.095143414151853E-4]:7.195871836156E1,(27[&rate=3.7545477211336446E-4]:3.305780664904E1,28[&rate=0.0010423896324149673]:3.305780664904E1)[&rate=5.59735807001709E-4]:3.890091171251E1)[&rate=8.474590178632765E-4]:6.888707783142E0)[&rate=0.0012931985098617196]:5.026867787386E1); +tree STATE_1310000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55140.96694267298,EEF_ucld_branchRates=-266.168517335019,lnP=-55140.96694267298,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.988674925122007E-4]:1.043689047176E1,9[&rate=5.058889965524765E-4]:1.043689047176E1)[&rate=2.4941543506937745E-4]:4.83045015668E0,15[&rate=9.132082699401146E-4]:1.526734062844E1)[&rate=8.318168442553656E-4]:1.035526475369E2,(14[&rate=0.00142615782472543]:4.553408589455E1,24[&rate=8.504582666961033E-4]:4.553408589455E1)[&rate=7.971679162523477E-4]:7.328590227078E1)[&rate=0.0010210387738082613]:6.397996069538E0,((((12[&rate=9.905145293690654E-4]:7.533219818484E1,(((((4[&rate=5.264642961069288E-4]:1.912853849069E0,2[&rate=0.0013234790459352378]:1.912853849069E0)[&rate=9.132082699401146E-4]:7.435696501323E-1,3[&rate=7.654182332212986E-4]:2.656423499202E0)[&rate=7.654182332212986E-4]:1.248357860229E1,5[&rate=3.869432354197096E-4]:1.51400021015E1)[&rate=4.853089407304815E-4]:1.415151625279E0,((7[&rate=4.5404954817196766E-4]:9.559288008933E0,6[&rate=8.909914235419271E-4]:9.559288008933E0)[&rate=2.985193062479921E-4]:1.256668673813E0,1[&rate=5.896166536640857E-4]:1.081595668275E1)[&rate=3.1676210513098107E-4]:5.739197044028E0)[&rate=6.343082915030767E-4]:5.518334425888E1,(((30[&rate=6.825422987726087E-4]:5.842448684577E1,26[&rate=6.1160601754234E-4]:5.842448684577E1)[&rate=7.654182332212986E-4]:6.164940330566E0,32[&rate=3.869432354197096E-4]:6.458942717634E1)[&rate=5.16167540148099E-4]:6.660923322771E0,(16[&rate=3.988674925122007E-4]:3.242386911328E1,((22[&rate=8.701342138032625E-4]:3.284312348937E0,21[&rate=4.1041034163159513E-4]:3.284312348937E0)[&rate=5.896166536640857E-4]:7.975588048879E0,20[&rate=7.504479402456898E-4]:1.125990039782E1)[&rate=0.0019348362196393116]:2.116396871546E1)[&rate=8.701342138032625E-4]:3.882648138583E1)[&rate=7.360020646330965E-4]:4.881474865434E-1)[&rate=6.700693478909562E-4]:3.593700199181E0)[&rate=7.360020646330965E-4]:1.614503148307E-1,25[&rate=5.896166536640857E-4]:7.549364849967E1)[&rate=3.7454271853246715E-4]:1.642580146972E0,(((19[&rate=8.701342138032625E-4]:1.545733146932E1,18[&rate=6.005319252345768E-4]:1.545733146932E1)[&rate=3.7454271853246715E-4]:5.642752373783E1,((11[&rate=6.005319252345768E-4]:2.22382604358E1,29[&rate=4.1041034163159513E-4]:2.22382604358E1)[&rate=7.504479402456898E-4]:4.82625558205E1,(33[&rate=0.001054843752334472]:5.952525684885E1,13[&rate=4.1041034163159513E-4]:5.952525684885E1)[&rate=4.5404954817196766E-4]:1.097555940745E1)[&rate=4.7496519138178443E-4]:1.384038950855E0)[&rate=9.905145293690654E-4]:1.421697975266E0,((10[&rate=7.220305670650937E-4]:2.063529370569E1,31[&rate=4.434207066278796E-4]:2.063529370569E1)[&rate=2.985193062479921E-4]:5.246589938567E1,23[&rate=4.6455430218954904E-4]:7.310119309136E1)[&rate=5.058889965524765E-4]:2.0536009106E-1)[&rate=7.654182332212986E-4]:3.829675464218E0)[&rate=6.228580832360526E-4]:1.185608470405E0,(17[&rate=0.0011360694639734488]:7.058571658017E1,(27[&rate=4.3263301442972047E-4]:2.712045854725E1,28[&rate=9.370046689971604E-4]:2.712045854725E1)[&rate=8.504582666961033E-4]:4.346525803292E1)[&rate=5.681897643302158E-4]:7.736120536869E0)[&rate=0.0015840400836317327]:4.689614711783E1); +tree STATE_1320000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55145.3514837849,EEF_ucld_branchRates=-266.168517335019,lnP=-55145.3514837849,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.76919368360792E-4]:9.946940913099E0,9[&rate=4.1511599663206396E-4]:9.946940913099E0)[&rate=4.8236976119610367E-4]:6.034762597551E0,15[&rate=5.76919368360792E-4]:1.598170351065E1)[&rate=6.307738020355539E-4]:1.029721168606E2,(14[&rate=8.997914531298059E-4]:4.750659011099E1,24[&rate=4.898810239672585E-4]:4.750659011099E1)[&rate=0.0010008597837225805]:7.144723026025E1)[&rate=5.191332971456053E-4]:1.081020619124E1,((((12[&rate=7.727250311979575E-4]:7.53976968528E1,(((((4[&rate=3.5438660087746935E-4]:1.829431436361E0,2[&rate=8.177660736716523E-4]:1.829431436361E0)[&rate=5.119042318277712E-4]:7.165334694378E-1,3[&rate=5.917898072917896E-4]:2.545964905799E0)[&rate=6.73893230179506E-4]:1.340360292987E1,5[&rate=4.5901359783638134E-4]:1.594956783567E1)[&rate=7.471291643623131E-4]:1.09589667188E0,((7[&rate=7.028740923921926E-4]:8.707196244682E0,6[&rate=8.757474487642202E-4]:8.707196244682E0)[&rate=6.832374241040475E-4]:2.918965619872E0,1[&rate=3.126534338204958E-4]:1.162616186455E1)[&rate=6.73893230179506E-4]:5.419302642996E0)[&rate=5.695884206973755E-4]:5.786127604056E1,(((30[&rate=6.227150760440991E-4]:5.384224538886E1,26[&rate=5.695884206973755E-4]:5.384224538886E1)[&rate=7.595699072269444E-4]:8.344210217079E0,32[&rate=5.263315920445214E-4]:6.218645560594E1)[&rate=5.046299195652986E-4]:8.612642486269E0,(16[&rate=4.508548421813411E-4]:3.800019331404E1,((22[&rate=7.471291643623131E-4]:3.544108056815E0,21[&rate=4.3373197804097137E-4]:3.544108056815E0)[&rate=4.1511599663206396E-4]:5.452384307922E0,20[&rate=7.353099743004154E-4]:8.996492364737E0)[&rate=0.0013042377387003923]:2.900370094931E1)[&rate=7.727250311979575E-4]:3.279890477816E1)[&rate=7.353099743004154E-4]:4.107642455901E0)[&rate=7.353099743004154E-4]:4.90956304699E-1)[&rate=6.73893230179506E-4]:2.412052124787E0,25[&rate=6.559986098006888E-4]:7.780974897759E1)[&rate=5.917898072917896E-4]:1.211344298879E0,(((19[&rate=6.070197964204931E-4]:1.800531853006E1,18[&rate=4.8236976119610367E-4]:1.800531853006E1)[&rate=3.5438660087746935E-4]:5.42088465776E1,((11[&rate=5.191332971456053E-4]:1.565696371011E1,29[&rate=8.352545621018388E-4]:1.565696371011E1)[&rate=5.76919368360792E-4]:5.421539682558E1,(33[&rate=4.4244493977029816E-4]:6.166045088526E1,13[&rate=4.4244493977029816E-4]:6.166045088526E1)[&rate=7.727250311979575E-4]:8.211909650437E0)[&rate=8.016620031693609E-4]:2.341804571968E0)[&rate=6.832374241040475E-4]:4.115976759203E0,((10[&rate=4.3373197804097137E-4]:2.144367660015E1,31[&rate=6.832374241040475E-4]:2.144367660015E1)[&rate=4.8236976119610367E-4]:5.395595490906E1,23[&rate=4.246505350606616E-4]:7.539963150921E1)[&rate=3.8242090364939106E-4]:9.305103576606E-1)[&rate=6.73893230179506E-4]:2.690951409602E0)[&rate=4.246505350606616E-4]:6.6636917167E0,(17[&rate=7.727250311979575E-4]:7.753340219262E1,(27[&rate=6.832374241040475E-4]:3.299236388267E1,28[&rate=0.0010543796552083074]:3.299236388267E1)[&rate=4.3373197804097137E-4]:4.454103830995E1)[&rate=5.550768167184186E-4]:8.151382800547E0)[&rate=0.0011344551453480733]:4.407924156931E1); +tree STATE_1330000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55145.30263896374,EEF_ucld_branchRates=-266.168517335019,lnP=-55145.30263896374,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.920800003552209E-4]:7.703462259216E0,9[&rate=8.644366508332302E-4]:7.703462259216E0)[&rate=3.7985457365216814E-4]:8.429615571707E0,15[&rate=4.864814306679694E-4]:1.613307783092E1)[&rate=7.963041900247137E-4]:9.077159797243E1,(14[&rate=0.0011757946616699243]:4.802761296986E1,24[&rate=0.0010269986196701079]:4.802761296986E1)[&rate=9.984883635338491E-4]:5.887706283349E1)[&rate=0.0010927933973366329]:2.168697434658E1,((((12[&rate=9.478564534657445E-4]:6.721066318336E1,((16[&rate=4.864814306679694E-4]:3.362958819224E1,((22[&rate=4.972388885615076E-4]:3.10837600682E0,21[&rate=5.50408045094477E-4]:3.10837600682E0)[&rate=7.963041900247137E-4]:5.114945419446E0,20[&rate=7.809324796812648E-4]:8.223321426266E0)[&rate=0.0014716225656306364]:2.540626676597E1)[&rate=8.835517501705293E-4]:3.168671327312E1,(((30[&rate=7.963041900247137E-4]:4.688796133238E1,26[&rate=6.267592754034485E-4]:4.688796133238E1)[&rate=9.250960133045228E-4]:7.761299029876E0,32[&rate=4.1853174021812967E-4]:5.464926036226E1)[&rate=4.1853174021812967E-4]:8.3706184527E0,((((4[&rate=9.250960133045228E-4]:1.932020677131E0,2[&rate=2.1615533129271222E-4]:1.932020677131E0)[&rate=7.809324796812648E-4]:5.629215565846E-1,3[&rate=6.381637697375828E-4]:2.494942233716E0)[&rate=8.288922392354498E-4]:1.16518003219E1,5[&rate=4.061815748098438E-4]:1.414674255561E1)[&rate=8.644366508332302E-4]:2.32607714826E0,((7[&rate=4.3048225216254707E-4]:1.015774448793E1,6[&rate=9.478564534657445E-4]:1.015774448793E1)[&rate=6.381637697375828E-4]:8.519460318665E-1,1[&rate=5.50408045094477E-4]:1.10096905198E1)[&rate=3.1443142076645054E-4]:5.463129184076E0)[&rate=5.93436149303632E-4]:4.654705911108E1)[&rate=6.15515635831176E-4]:2.296422650394E0)[&rate=6.15515635831176E-4]:1.89436171801E0)[&rate=7.809324796812648E-4]:2.372639640471E0,25[&rate=7.963041900247137E-4]:6.958330282383E1)[&rate=4.061815748098438E-4]:4.06220826455E0,((((11[&rate=4.534774415688267E-4]:1.876467808031E1,29[&rate=5.185613993546539E-4]:1.876467808031E1)[&rate=6.267592754034485E-4]:4.869020828309E1,(33[&rate=9.478564534657445E-4]:5.500339939219E1,13[&rate=6.615349504165037E-4]:5.500339939219E1)[&rate=3.1443142076645054E-4]:1.245148697121E1)[&rate=0.0016322844698275763]:1.336654750797E0,(19[&rate=9.037216918371041E-4]:1.715194295217E1,18[&rate=6.381637697375828E-4]:1.715194295217E1)[&rate=4.3048225216254707E-4]:5.163959816202E1)[&rate=5.397830689284798E-4]:2.39971468124E0,((10[&rate=7.111541339738366E-4]:2.184027018874E1,31[&rate=4.534774415688267E-4]:2.184027018874E1)[&rate=4.1853174021812967E-4]:4.842136607569E1,23[&rate=4.1853174021812967E-4]:7.026163626443E1)[&rate=0.001058225055366865]:9.296195309961E-1)[&rate=7.111541339738366E-4]:2.454255292954E0)[&rate=7.809324796812648E-4]:4.008358278038E0,(17[&rate=7.517419611962864E-4]:6.740256680429E1,(27[&rate=5.291741074700119E-4]:2.661667141988E1,28[&rate=0.0014716225656306364]:2.661667141988E1)[&rate=4.864814306679694E-4]:4.078589538441E1)[&rate=0.0014716225656306364]:1.025130256213E1)[&rate=9.478564534657445E-4]:5.093778078351E1); +tree STATE_1340000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55118.57112156718,EEF_ucld_branchRates=-266.168517335019,lnP=-55118.57112156718,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.425774147057012E-4]:1.071278106267E1,9[&rate=7.987459704723944E-4]:1.071278106267E1)[&rate=2.914607363093562E-4]:7.15024574907E0,15[&rate=3.7515416798814997E-4]:1.786302681174E1)[&rate=7.091319246557721E-4]:9.826308795989E1,(14[&rate=0.0016818509836551408]:4.685120451276E1,24[&rate=7.987459704723944E-4]:4.685120451276E1)[&rate=0.0010511448457717863]:6.927491025887E1)[&rate=0.0016818509836551408]:1.314806656157E1,((((12[&rate=7.091319246557721E-4]:7.351052051268E1,(((30[&rate=8.897654699911149E-4]:4.78019549896E1,26[&rate=6.354919727125041E-4]:4.78019549896E1)[&rate=4.7071526889885156E-4]:1.093132549401E1,32[&rate=3.297429194003855E-4]:5.873328048361E1)[&rate=2.442996782926037E-4]:1.206800160819E1,((16[&rate=4.389723569621661E-4]:3.707605158672E1,((22[&rate=5.838689769527236E-4]:3.105081856116E0,21[&rate=0.0014896195568288102]:3.105081856116E0)[&rate=7.604105800855046E-4]:6.542379496988E0,20[&rate=3.7515416798814997E-4]:9.647461353103E0)[&rate=0.0011452630938419367]:2.742859023362E1)[&rate=0.0014896195568288102]:3.326064693027E1,((((4[&rate=2.240835407059997E-4]:1.956252346197E0,3[&rate=5.717022787222517E-4]:1.956252346197E0)[&rate=5.597800638342267E-4]:2.887921327012E-1,2[&rate=7.255101815098818E-4]:2.245044478899E0)[&rate=4.073331541069447E-4]:1.189457315739E1,5[&rate=3.529683015198361E-4]:1.413961763629E1)[&rate=3.415176979765365E-4]:2.040861569918E0,((7[&rate=3.967042877358043E-4]:1.083732152997E1,6[&rate=4.389723569621661E-4]:1.083732152997E1)[&rate=9.456917892111143E-4]:2.816214321114E-1,1[&rate=3.415176979765365E-4]:1.111894296208E1)[&rate=8.64789814399056E-4]:5.061536244123E0)[&rate=4.6008895961242326E-4]:5.415621931079E1)[&rate=5.48079783506853E-4]:4.645835748074E-1)[&rate=6.354919727125041E-4]:2.709238420884E0)[&rate=3.297429194003855E-4]:1.643701951196E0,25[&rate=7.091319246557721E-4]:7.515422246388E1)[&rate=3.415176979765365E-4]:1.562257432175E0,((((33[&rate=8.897654699911149E-4]:6.180651506387E1,13[&rate=3.7515416798814997E-4]:6.180651506387E1)[&rate=7.425774147057012E-4]:8.814726450282E0,(11[&rate=4.7071526889885156E-4]:1.417599816577E1,29[&rate=7.091319246557721E-4]:1.417599816577E1)[&rate=8.897654699911149E-4]:5.644524334839E1)[&rate=7.790987649050268E-4]:1.322453674192E0,(19[&rate=7.255101815098818E-4]:1.713452347746E1,18[&rate=0.001012301417134574]:1.713452347746E1)[&rate=5.365801950322216E-4]:5.480917171088E1)[&rate=1.5749487574162765E-4]:3.006079052846E0,((10[&rate=5.48079783506853E-4]:2.039958295344E1,31[&rate=8.64789814399056E-4]:2.039958295344E1)[&rate=3.415176979765365E-4]:5.187159943134E1,23[&rate=4.073331541069447E-4]:7.227118238479E1)[&rate=4.921966807710647E-4]:2.678591856405E0)[&rate=4.284427592948276E-4]:1.766705654863E0)[&rate=5.597800638342267E-4]:1.652046261644E0,(17[&rate=9.77399492257163E-4]:6.540603314803E1,(27[&rate=5.597800638342267E-4]:2.676235534452E1,28[&rate=6.635009015969945E-4]:2.676235534452E1)[&rate=8.897654699911149E-4]:3.864367780351E1)[&rate=2.240835407059997E-4]:1.296249300967E1)[&rate=8.414308463976178E-4]:5.090565517551E1); +tree STATE_1350000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55138.548908553275,EEF_ucld_branchRates=-266.168517335019,lnP=-55138.548908553275,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.1419014849046835E-4]:1.039759783966E1,9[&rate=6.759619958816485E-4]:1.039759783966E1)[&rate=4.1581162496061406E-4]:8.179943095316E0,15[&rate=7.860691520011469E-4]:1.857754093497E1)[&rate=8.367428394828276E-4]:9.312108690729E1,(14[&rate=0.0011073784503783308]:4.283943082598E1,24[&rate=0.0011073784503783308]:4.283943082598E1)[&rate=8.56496658847231E-4]:6.885919701629E1)[&rate=0.0014000459437884432]:1.710994810625E1,((((12[&rate=7.713252958882316E-4]:7.380014879164E1,((16[&rate=5.939985148704459E-4]:4.05076197524E1,((22[&rate=6.970000490024071E-4]:4.096207031646E0,21[&rate=6.863049142318677E-4]:4.096207031646E0)[&rate=4.913621150256415E-4]:6.751091746551E0,20[&rate=7.080875572618298E-4]:1.08472987782E1)[&rate=6.759619958816485E-4]:2.966032097421E1)[&rate=0.0012004708896018903]:3.097245531099E1,(((((4[&rate=6.759619958816485E-4]:2.665395458276E0,3[&rate=4.339493665390688E-4]:2.665395458276E0)[&rate=4.42616783617283E-4]:4.322731695401E-1,2[&rate=6.467140853789835E-4]:3.097668627816E0)[&rate=5.302187050194217E-4]:1.11257888257E1,5[&rate=2.4851141585971177E-4]:1.422345745351E1)[&rate=7.196136009553508E-4]:1.404664474952E0,((7[&rate=7.080875572618298E-4]:1.088536563893E1,6[&rate=6.284275279269907E-4]:1.088536563893E1)[&rate=5.775858132059484E-4]:8.084332546282E-1,1[&rate=4.675158235592779E-4]:1.169379889356E1)[&rate=5.695288101655564E-4]:3.934323034905E0)[&rate=5.695288101655564E-4]:5.243492412393E1,((30[&rate=7.860691520011469E-4]:5.233483004036E1,26[&rate=4.991784437569117E-4]:5.233483004036E1)[&rate=6.467140853789835E-4]:8.373472929551E0,32[&rate=4.339493665390688E-4]:6.070830296991E1)[&rate=4.062215493377317E-4]:7.35474308248E0)[&rate=4.675158235592779E-4]:3.417029011006E0)[&rate=7.713252958882316E-4]:2.320073728243E0)[&rate=5.147144393905096E-4]:1.733687291754E0,25[&rate=8.782149957264873E-4]:7.553383608339E1)[&rate=3.1419014849046835E-4]:1.233248395423E0,((((33[&rate=7.860691520011469E-4]:5.69995734868E1,13[&rate=4.675158235592779E-4]:5.69995734868E1)[&rate=4.062215493377317E-4]:1.312753858307E1,(11[&rate=4.1581162496061406E-4]:1.32272923462E1,29[&rate=6.659360729879755E-4]:1.32272923462E1)[&rate=6.023821773396867E-4]:5.689981972367E1)[&rate=5.775858132059484E-4]:2.197517846045E0,(19[&rate=4.339493665390688E-4]:1.978938956257E1,18[&rate=5.857378277038243E-4]:1.978938956257E1)[&rate=3.4829290701487536E-4]:5.253524035335E1)[&rate=7.442045428766068E-4]:2.718969063263E0,((10[&rate=4.834919730499928E-4]:2.351242001546E1,31[&rate=2.898257698484427E-4]:2.351242001546E1)[&rate=4.1581162496061406E-4]:5.060892926078E1,23[&rate=4.062215493377317E-4]:7.412134927624E1)[&rate=5.147144393905096E-4]:9.222497029401E-1)[&rate=4.991784437569117E-4]:1.723485499639E0)[&rate=5.615536705447738E-4]:3.547262302409E0,(17[&rate=7.316317098152575E-4]:7.021975670511E1,(27[&rate=6.659360729879755E-4]:3.037929369254E1,28[&rate=9.023966270115289E-4]:3.037929369254E1)[&rate=7.080875572618298E-4]:3.984046301257E1)[&rate=7.860691520011469E-4]:1.009459007612E1)[&rate=8.367428394828276E-4]:4.849422916729E1); +tree STATE_1360000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55154.88167364076,EEF_ucld_branchRates=-266.168517335019,lnP=-55154.88167364076,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.249697977191661E-4]:8.617535287321E0,9[&rate=5.962221775508343E-4]:8.617535287321E0)[&rate=6.323250083025315E-4]:6.594016962682E0,15[&rate=4.483645700286655E-4]:1.521155225E1)[&rate=9.659157961857334E-4]:1.036750746772E2,(14[&rate=8.923805832410555E-4]:5.116773338607E1,24[&rate=8.358129358829408E-4]:5.116773338607E1)[&rate=0.0011970974087677408]:6.771889354118E1)[&rate=0.0011970974087677408]:1.049638282817E1,((((((33[&rate=6.811917639589017E-4]:6.123199561035E1,13[&rate=4.5775672699555834E-4]:6.123199561035E1)[&rate=6.050669970137756E-4]:8.217802063719E0,(11[&rate=7.368173054474015E-4]:1.250851779352E1,29[&rate=8.193867408230375E-4]:1.250851779352E1)[&rate=7.135209300822881E-4]:5.694127988055E1)[&rate=8.923805832410555E-4]:3.206404678396E0,(19[&rate=7.618961617515154E-4]:1.262904358934E1,18[&rate=7.024310218137768E-4]:1.262904358934E1)[&rate=4.2873971161581557E-4]:6.002715876312E1)[&rate=3.1960556518467476E-4]:1.97227434832E0,((10[&rate=4.847865958186933E-4]:2.626800645721E1,31[&rate=4.847865958186933E-4]:2.626800645721E1)[&rate=5.531564829493839E-4]:4.660313408704E1,23[&rate=7.491087310993427E-4]:7.287114054425E1)[&rate=5.021668478165981E-4]:1.757336156533E0)[&rate=7.249697977191661E-4]:1.693723493739E0,((12[&rate=6.231028862706879E-4]:7.38041511601E1,((16[&rate=3.1960556518467476E-4]:4.268826258471E1,((22[&rate=8.358129358829408E-4]:3.515189693597E0,21[&rate=5.021668478165981E-4]:3.515189693597E0)[&rate=3.560629818671987E-4]:7.393855590419E0,20[&rate=5.788058702297365E-4]:1.090904528402E1)[&rate=8.038933127879326E-4]:3.177921730069E1)[&rate=0.0013027988855209896]:2.976909360922E1,(((((4[&rate=5.36212713292376E-4]:2.654629499238E0,3[&rate=4.1837992306850876E-4]:2.654629499238E0)[&rate=6.610143635178826E-4]:2.775094163091E-1,2[&rate=0.0011970974087677408]:2.932138915547E0)[&rate=6.709832846391024E-4]:9.836679477481E0,5[&rate=4.1837992306850876E-4]:1.276881839303E1)[&rate=7.618961617515154E-4]:3.10690510018E0,((7[&rate=4.5775672699555834E-4]:1.117079812895E1,6[&rate=4.3871100716385734E-4]:1.117079812895E1)[&rate=8.923805832410555E-4]:1.138911501921E0,1[&rate=6.417054049917538E-4]:1.230970963087E1)[&rate=6.050669970137756E-4]:3.566013862337E0)[&rate=5.36212713292376E-4]:5.382071245E1,((30[&rate=8.358129358829408E-4]:4.939880215339E1,26[&rate=8.358129358829408E-4]:4.939880215339E1)[&rate=4.2873971161581557E-4]:1.299015921451E1,32[&rate=2.936746401631451E-4]:6.23889613679E1)[&rate=4.847865958186933E-4]:7.307474575308E0)[&rate=5.107389328500367E-4]:2.760920250723E0)[&rate=7.618961617515154E-4]:1.346794966167E0)[&rate=4.483645700286655E-4]:9.239980541779E-1,25[&rate=9.388001860612367E-4]:7.472814921427E1)[&rate=2.499490231120848E-4]:1.594050980246E0)[&rate=4.3871100716385734E-4]:6.648884236383E0,(17[&rate=7.491087310993427E-4]:7.729445779024E1,(27[&rate=5.36212713292376E-4]:4.0810378373E1,28[&rate=7.024310218137768E-4]:4.0810378373E1)[&rate=5.962221775508343E-4]:3.648407941724E1)[&rate=7.135209300822881E-4]:5.676626640663E0)[&rate=7.892111646861885E-4]:4.641192532452E1); +tree STATE_1370000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55161.72593721111,EEF_ucld_branchRates=-266.168517335019,lnP=-55161.72593721111,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.075498942296498E-4]:9.499997955933E0,9[&rate=4.777560469269576E-4]:9.499997955933E0)[&rate=5.314940929565066E-4]:1.034031043582E1,15[&rate=5.492657550090859E-4]:1.984030839175E1)[&rate=7.070917474507502E-4]:9.06702569276E1,(14[&rate=0.0012423700575887862]:4.646972515889E1,24[&rate=7.997612636474515E-4]:4.646972515889E1)[&rate=0.0012423700575887862]:6.404084016046E1)[&rate=7.437375394134466E-4]:1.74070402285E1,((((((11[&rate=8.88821328046344E-4]:1.57574856806E1,29[&rate=9.608465576299054E-4]:1.57574856806E1)[&rate=7.070917474507502E-4]:5.783233421912E1,(33[&rate=9.106902406142049E-4]:5.756480516057E1,13[&rate=4.08851024340255E-4]:5.756480516057E1)[&rate=3.075498942296498E-4]:1.602501473914E1)[&rate=7.705263813180125E-4]:6.114017274561E-1,(19[&rate=5.048363747619781E-4]:1.332777837342E1,18[&rate=7.568606362520217E-4]:1.332777837342E1)[&rate=4.1956173764178906E-4]:6.087344325376E1)[&rate=4.1956173764178906E-4]:1.860083352401E0,((10[&rate=6.327021259429665E-4]:2.828940835231E1,31[&rate=7.568606362520217E-4]:2.828940835231E1)[&rate=4.685359164666626E-4]:4.602310366972E1,23[&rate=4.958828004719774E-4]:7.431251202203E1)[&rate=4.496395224965875E-4]:1.748792957545E0)[&rate=6.7366725652099E-4]:1.129565972212E0,((12[&rate=7.848007931243338E-4]:7.324052145657E1,((16[&rate=5.403694516066005E-4]:4.225543650921E1,((22[&rate=6.845077969393678E-4]:4.55103022196E0,21[&rate=3.4475669517703447E-4]:4.55103022196E0)[&rate=7.188993911109792E-4]:4.452458936007E0,20[&rate=8.88821328046344E-4]:9.003489157967E0)[&rate=7.070917474507502E-4]:3.325194735125E1)[&rate=9.902111403179484E-4]:2.899689458244E1,(((((4[&rate=6.03903107226097E-4]:2.658467615532E0,3[&rate=4.591746835097254E-4]:2.658467615532E0)[&rate=7.568606362520217E-4]:4.312814910474E-1,2[&rate=4.2988480108298234E-4]:3.08974910658E0)[&rate=4.958828004719774E-4]:1.021984137943E1,5[&rate=3.277660969959996E-4]:1.330959048601E1)[&rate=8.321251008112734E-4]:2.200936733566E0,(1[&rate=4.3989172715697524E-4]:1.112175108672E1,(6[&rate=5.945740391571921E-4]:1.050311365094E1,7[&rate=4.2988480108298234E-4]:1.050311365094E1)[&rate=3.9766055960902637E-4]:6.186374357867E-1)[&rate=4.777560469269576E-4]:4.38877613285E0)[&rate=5.314940929565066E-4]:5.483256969557E1,((30[&rate=6.133565372713593E-4]:5.143904726406E1,26[&rate=5.492657550090859E-4]:5.143904726406E1)[&rate=8.497713405707449E-4]:8.101793263892E0,32[&rate=2.8123200507937206E-4]:5.954084052795E1)[&rate=7.070917474507502E-4]:1.080225638719E1)[&rate=5.945740391571921E-4]:9.092341765113E-1)[&rate=8.497713405707449E-4]:1.988190364919E0)[&rate=8.321251008112734E-4]:1.652694864405E0,25[&rate=6.7366725652099E-4]:7.489321632097E1)[&rate=7.705263813180125E-4]:2.297654630813E0)[&rate=0.0012423700575887862]:5.556737538729E0,(17[&rate=9.106902406142049E-4]:7.03260697609E1,(27[&rate=3.9766055960902637E-4]:3.13943760786E1,28[&rate=6.327021259429665E-4]:3.13943760786E1)[&rate=7.997612636474515E-4]:3.893169368229E1)[&rate=6.03903107226097E-4]:1.242153872962E1)[&rate=0.0012423700575887862]:4.516999705734E1); +tree STATE_1380000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.6504488446,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.6504488446,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.065068700928776E-4]:8.752977697569E0,9[&rate=4.4053117052859377E-4]:8.752977697569E0)[&rate=3.8386815118208637E-4]:1.017225215594E1,15[&rate=3.065068700928776E-4]:1.892522985351E1)[&rate=7.707524343753133E-4]:8.042421442187E1,(14[&rate=0.001213608575632998]:4.330663727872E1,24[&rate=6.19001412394701E-4]:4.330663727872E1)[&rate=8.42292645116606E-4]:5.604280699666E1)[&rate=7.707524343753133E-4]:2.476756898847E1,((((((11[&rate=2.3528611030851858E-4]:2.342262057857E1,29[&rate=6.949224458340483E-4]:2.342262057857E1)[&rate=6.949224458340483E-4]:5.020595297221E1,(33[&rate=9.35474630888023E-4]:6.082180136191E1,13[&rate=2.1980612188580873E-4]:6.082180136191E1)[&rate=7.500873720743129E-4]:1.280677218887E1)[&rate=4.901532317545468E-4]:7.583160975867E-1,(19[&rate=7.123139970498976E-4]:1.412312675036E1,18[&rate=8.165923329199221E-4]:1.412312675036E1)[&rate=4.901532317545468E-4]:6.026376289801E1)[&rate=5.799249596278965E-4]:1.201420800681E0,((10[&rate=6.19001412394701E-4]:2.441519776634E1,31[&rate=7.123139970498976E-4]:2.441519776634E1)[&rate=3.8386815118208637E-4]:5.078597543386E1,23[&rate=4.2144550867881673E-4]:7.52011732002E1)[&rate=3.6509292093791314E-4]:3.871372488554E-1)[&rate=2.960169814714622E-4]:1.808007068212E0,((12[&rate=7.707524343753133E-4]:7.495669910548E1,((16[&rate=4.4053117052859377E-4]:3.632162654942E1,((22[&rate=4.3094989632617086E-4]:2.723210255167E0,21[&rate=4.5020525946000255E-4]:2.723210255167E0)[&rate=6.783767640629183E-4]:5.917951151987E0,20[&rate=5.005376999618051E-4]:8.641161407154E0)[&rate=0.0013222408139842972]:2.768046514226E1)[&rate=9.35474630888023E-4]:3.634348867437E1,(((((4[&rate=3.2667291100247053E-4]:2.128061481219E0,3[&rate=3.5563669570859186E-4]:2.128061481219E0)[&rate=5.329440609920201E-4]:3.500349396599E-1,2[&rate=2.8515855554952103E-4]:2.478096420879E0)[&rate=3.6509292093791314E-4]:1.123046474401E1,5[&rate=5.005376999618051E-4]:1.370856116489E1)[&rate=6.625852384498579E-4]:2.702755400786E0,(6[&rate=5.329440609920201E-4]:1.17650838733E1,(1[&rate=6.19001412394701E-4]:9.469917920107E0,7[&rate=1.788506770495294E-4]:9.469917920107E0)[&rate=2.8515855554952103E-4]:2.295165953193E0)[&rate=7.928431146915213E-4]:4.646232692378E0)[&rate=3.932307364119982E-4]:5.561294850316E1,((30[&rate=6.783767640629183E-4]:5.388598379287E1,26[&rate=5.111174717027264E-4]:5.388598379287E1)[&rate=6.625852384498579E-4]:1.041760635456E1,32[&rate=2.8515855554952103E-4]:6.430359014744E1)[&rate=6.19001412394701E-4]:7.720674921402E0)[&rate=3.6509292093791314E-4]:6.408501549488E-1)[&rate=6.19001412394701E-4]:2.291583881697E0)[&rate=1.788506770495294E-4]:1.35084041488E0,25[&rate=6.055385233629798E-4]:7.630753952036E1)[&rate=3.3645823436461315E-4]:1.088777996899E0)[&rate=0.0013222408139842972]:3.115695447977E0,(17[&rate=8.703184839426816E-4]:6.937616115495E1,(27[&rate=1.788506770495294E-4]:3.472162681509E1,28[&rate=8.165923329199221E-4]:3.472162681509E1)[&rate=5.799249596278965E-4]:3.465453433986E1)[&rate=3.16705358931776E-4]:1.113585181029E1)[&rate=0.0013222408139842972]:4.360500029861E1); +tree STATE_1390000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55126.76398413293,EEF_ucld_branchRates=-266.168517335019,lnP=-55126.76398413293,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.753680568889684E-4]:7.858405734945E0,9[&rate=8.516375335182313E-4]:7.858405734945E0)[&rate=5.478517198306347E-4]:8.554521422425E0,15[&rate=6.112264434133929E-4]:1.641292715737E1)[&rate=8.119131396873995E-4]:9.065112668216E1,(14[&rate=0.0012810625076170876]:4.170777599229E1,24[&rate=7.762560221783427E-4]:4.170777599229E1)[&rate=0.0012810625076170876]:6.535627784724E1)[&rate=8.971337723704443E-4]:1.942577600451E1,((((((11[&rate=4.770249485044845E-4]:1.989826043279E1,29[&rate=6.02295069833516E-4]:1.989826043279E1)[&rate=7.877670453876485E-4]:5.061548952531E1,(33[&rate=8.119131396873995E-4]:6.075643073145E1,13[&rate=3.9193294264194394E-4]:6.075643073145E1)[&rate=6.291184222040986E-4]:9.757319226653E0)[&rate=7.03226211741024E-4]:1.377076449703E0,(19[&rate=7.650707262133881E-4]:1.273699869083E1,18[&rate=0.0012105851690240635]:1.273699869083E1)[&rate=4.770249485044845E-4]:5.915382771698E1)[&rate=3.4206191354322257E-4]:3.398579637754E0,((10[&rate=8.246342526899382E-4]:1.977345183244E1,31[&rate=8.971337723704443E-4]:1.977345183244E1)[&rate=5.571245852143261E-4]:5.370015632853E1,23[&rate=3.4206191354322257E-4]:7.347360816097E1)[&rate=6.840816288693066E-4]:1.81579788459E0)[&rate=4.987767399429767E-4]:1.603451294238E0,((12[&rate=7.331681994384833E-4]:7.499847439311E1,((16[&rate=4.531144001203039E-4]:3.020043852391E1,((22[&rate=8.971337723704443E-4]:2.076149905965E0,21[&rate=8.246342526899382E-4]:2.076149905965E0)[&rate=9.512637010068684E-4]:5.645616854511E0,20[&rate=4.987767399429767E-4]:7.721766760476E0)[&rate=0.0012810625076170876]:2.247867176344E1)[&rate=4.770249485044845E-4]:4.348388622681E1,(((((4[&rate=7.877670453876485E-4]:1.656853159756E0,2[&rate=8.811839713007434E-4]:1.656853159756E0)[&rate=5.384439833987434E-4]:8.466007322695E-1,3[&rate=8.119131396873995E-4]:2.503453892026E0)[&rate=0.0010194802074486018]:1.220289372667E1,5[&rate=4.0994026115434E-4]:1.47063476187E1)[&rate=4.6540207857661333E-4]:2.661259554805E0,(1[&rate=4.987767399429767E-4]:1.204639149737E1,(6[&rate=9.720389841955517E-4]:9.640213110594E0,7[&rate=5.190982088454859E-4]:9.640213110594E0)[&rate=6.02295069833516E-4]:2.406178386774E0)[&rate=9.320047976716845E-4]:5.321215676133E0)[&rate=7.650707262133881E-4]:5.528566329665E1,((30[&rate=7.130250124483001E-4]:5.563579333722E1,26[&rate=5.753680568889684E-4]:5.563579333722E1)[&rate=8.660522372020216E-4]:9.973289110392E0,32[&rate=3.4206191354322257E-4]:6.560908244761E1)[&rate=6.74702108215824E-4]:7.044188022539E0)[&rate=8.516375335182313E-4]:1.031054280572E0)[&rate=5.478517198306347E-4]:1.314149642383E0)[&rate=6.65429962947757E-4]:1.151827941771E0,25[&rate=6.291184222040986E-4]:7.615030233488E1)[&rate=5.662889199190407E-4]:7.425550049205E-1)[&rate=9.320047976716845E-4]:3.036139094536E0,(17[&rate=6.65429962947757E-4]:6.633629727939E1,(27[&rate=7.650707262133881E-4]:2.739042686163E1,28[&rate=9.512637010068684E-4]:2.739042686163E1)[&rate=6.74702108215824E-4]:3.894587041776E1)[&rate=7.541794849243332E-4]:1.359269915494E1)[&rate=0.0010194802074486018]:4.65608334097E1); +tree STATE_1400000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55122.339776435816,EEF_ucld_branchRates=-266.168517335019,lnP=-55122.339776435816,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=9.24802706337758E-4]:8.19122985896E0,9[&rate=0.0010012943675245408]:8.19122985896E0)[&rate=2.7079148725401203E-4]:8.870509787253E0,15[&rate=3.8570630280822965E-4]:1.706173964621E1)[&rate=7.029752663799366E-4]:9.316076750626E1,(14[&rate=9.60940218416194E-4]:4.721250295053E1,24[&rate=8.6216056920456E-4]:4.721250295053E1)[&rate=0.001046986033400564]:6.301000420193E1)[&rate=3.2487633079357367E-4]:1.415593417696E1,((((((11[&rate=3.554382209240014E-4]:2.428863701632E1,29[&rate=3.756098570941804E-4]:2.428863701632E1)[&rate=7.029752663799366E-4]:4.593828997375E1,(33[&rate=6.51349561298062E-4]:6.17822271703E1,13[&rate=3.0394503868116875E-4]:6.17822271703E1)[&rate=3.0394503868116875E-4]:8.444699819767E0)[&rate=6.51349561298062E-4]:2.248199553508E0,(19[&rate=8.6216056920456E-4]:1.499911457105E1,18[&rate=5.778198061725356E-4]:1.499911457105E1)[&rate=2.7079148725401203E-4]:5.747601197252E1)[&rate=4.915653780036189E-4]:4.452608163301E0,((10[&rate=2.4657397118491644E-4]:2.143599897995E1,31[&rate=7.417823514505076E-4]:2.143599897995E1)[&rate=4.162772297269718E-4]:5.530133199781E1,23[&rate=5.267373600583946E-4]:7.673733097775E1)[&rate=5.147574702712879E-4]:1.904037291223E-1)[&rate=7.628385890976265E-4]:4.228278682599E0,((12[&rate=7.85195359250154E-4]:7.820570797916E1,((((((4[&rate=4.2662254153311813E-4]:1.535204764547E0,2[&rate=6.849837230565679E-4]:1.535204764547E0)[&rate=1.8501886210531914E-4]:1.207573350445E0,3[&rate=2.1914588543100658E-4]:2.742778114992E0)[&rate=6.20355986591576E-4]:9.999934999491E0,5[&rate=3.0394503868116875E-4]:1.274271311448E1)[&rate=5.147574702712879E-4]:2.504259395869E0,(1[&rate=2.821632248964743E-4]:1.124712564804E1,(6[&rate=7.85195359250154E-4]:1.002553648333E1,7[&rate=1.6204207791489274E-4]:1.002553648333E1)[&rate=0.0014654829668484938]:1.221589164709E0)[&rate=4.060213528469313E-4]:3.99984686231E0)[&rate=3.756098570941804E-4]:5.962765726298E1,((30[&rate=5.267373600583946E-4]:5.503476500596E1,26[&rate=4.476516454598632E-4]:5.503476500596E1)[&rate=5.515888691392736E-4]:1.386450264554E1,32[&rate=4.476516454598632E-4]:6.88992676515E1)[&rate=1.6204207791489274E-4]:5.975362121832E0)[&rate=3.554382209240014E-4]:1.986363579171E0,(16[&rate=3.554382209240014E-4]:3.217125268481E1,((22[&rate=8.6216056920456E-4]:2.340009101654E0,21[&rate=6.20355986591576E-4]:2.340009101654E0)[&rate=4.915653780036189E-4]:5.953802565491E0,20[&rate=8.090398696356213E-4]:8.293811667145E0)[&rate=0.0016732813751218624]:2.387744101767E1)[&rate=6.678022942878458E-4]:4.468974066769E1)[&rate=7.029752663799366E-4]:1.344714626653E0)[&rate=1.6204207791489274E-4]:4.795909718951E-1,25[&rate=6.056986357829584E-4]:7.868529895105E1)[&rate=3.554382209240014E-4]:2.470714438421E0)[&rate=8.346006318734228E-4]:2.881559651375E0,(17[&rate=7.218713402748894E-4]:7.400592451596E1,(27[&rate=2.821632248964743E-4]:2.876464246144E1,28[&rate=0.0013335145638801924]:2.876464246144E1)[&rate=5.778198061725356E-4]:4.524128205452E1)[&rate=6.355547692971289E-4]:1.003164852488E1)[&rate=0.0016732813751218624]:4.034086828858E1); +tree STATE_1410000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55163.3935945383,EEF_ucld_branchRates=-266.168517335019,lnP=-55163.3935945383,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.5292014258110024E-4]:7.130621327583E0,9[&rate=5.398310647903867E-4]:7.130621327583E0)[&rate=3.851810934633781E-4]:6.893552370316E0,15[&rate=8.983637816324361E-4]:1.40241736979E1)[&rate=9.808262641340737E-4]:8.762432034037E1,(14[&rate=0.0010235593430365133]:4.207662040389E1,24[&rate=0.0013483044502161205]:4.207662040389E1)[&rate=9.282688252355821E-4]:5.957187363438E1)[&rate=8.587271569987223E-4]:1.816797971758E1,((((((11[&rate=7.916515747379436E-4]:2.172928251256E1,29[&rate=5.073876624633162E-4]:2.172928251256E1)[&rate=8.46590163237665E-4]:4.423816299637E1,(33[&rate=6.134507640268771E-4]:5.925791647362E1,13[&rate=7.251158238847533E-4]:5.925791647362E1)[&rate=6.220455464741775E-4]:6.709529035314E0)[&rate=6.987168982446417E-4]:1.749255299989E0,(19[&rate=9.445946506250665E-4]:1.141088412532E1,18[&rate=7.525768337650957E-4]:1.141088412532E1)[&rate=6.644947301137631E-4]:5.630581668361E1)[&rate=6.81511936042071E-4]:3.220727555077E0,((10[&rate=0.001193687248974803]:2.079693916843E1,31[&rate=9.282688252355821E-4]:2.079693916843E1)[&rate=6.390818124182727E-4]:4.924978873534E1,23[&rate=5.498034337926013E-4]:7.004672790377E1)[&rate=8.126367741410239E-4]:8.907004602334E-1)[&rate=5.871281474405948E-4]:2.50776107453E0,((12[&rate=7.620429738500196E-4]:6.959242779252E1,((((((4[&rate=8.126367741410239E-4]:2.085455664494E0,2[&rate=7.916515747379436E-4]:2.085455664494E0)[&rate=3.3634406799986076E-4]:8.399325698624E-1,3[&rate=5.871281474405948E-4]:2.925388234356E0)[&rate=6.475565056749473E-4]:9.03523675492E0,5[&rate=6.047804337187823E-4]:1.196062498928E1)[&rate=5.688903147893429E-4]:2.276765125325E0,(1[&rate=8.983637816324361E-4]:9.628405858725E0,(6[&rate=7.916515747379436E-4]:7.843382518316E0,7[&rate=5.073876624633162E-4]:7.843382518316E0)[&rate=7.251158238847533E-4]:1.785023340409E0)[&rate=8.845451963420485E-4]:4.608984255875E0)[&rate=4.8250870056834334E-4]:5.232035074262E1,((30[&rate=8.845451963420485E-4]:4.785737870199E1,26[&rate=6.390818124182727E-4]:4.785737870199E1)[&rate=9.282688252355821E-4]:7.742328068296E0,32[&rate=5.871281474405948E-4]:5.559970677028E1)[&rate=4.1358919677052914E-4]:1.095803408694E1)[&rate=8.46590163237665E-4]:1.076926893791E0,(16[&rate=5.187131058016917E-4]:2.736880309325E1,((22[&rate=0.001048365368438611]:2.726489911129E0,21[&rate=7.71696458904038E-4]:2.726489911129E0)[&rate=5.29493755873561E-4]:5.306784973402E0,20[&rate=5.871281474405948E-4]:8.033274884532E0)[&rate=0.0015440777223875378]:1.933552820872E1)[&rate=9.282688252355821E-4]:4.026586465776E1)[&rate=8.348928553535478E-4]:1.95776004151E0)[&rate=8.46590163237665E-4]:5.051758831679E-1,25[&rate=7.074236852227159E-4]:7.009760367569E1)[&rate=7.162185203371399E-4]:3.347585762839E0)[&rate=4.1358919677052914E-4]:4.497399052369E0,(17[&rate=6.900842002504263E-4]:6.848160962452E1,(27[&rate=5.29493755873561E-4]:2.734115266298E1,28[&rate=0.001048365368438611]:2.734115266298E1)[&rate=8.126367741410239E-4]:4.114045696153E1)[&rate=8.020016444966069E-4]:9.460978866385E0)[&rate=0.0015440777223875378]:4.187388526495E1); +tree STATE_1420000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55138.79717487136,EEF_ucld_branchRates=-266.168517335019,lnP=-55138.79717487136,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.431556883464891E-4]:8.802868894074E0,9[&rate=6.70455233908509E-4]:8.802868894074E0)[&rate=7.899079483443336E-4]:6.010368563483E0,15[&rate=4.759798861791526E-4]:1.481323745756E1)[&rate=7.65844168826397E-4]:9.814438167593E1,(14[&rate=0.0013214620555222938]:4.98504700114E1,24[&rate=0.0010675312113296567]:4.98504700114E1)[&rate=0.0012446512013837613]:6.310714912209E1)[&rate=4.976437192510981E-4]:1.470633590168E1,((((((11[&rate=8.290821376316145E-4]:1.748582532819E1,29[&rate=6.03892106974119E-4]:1.748582532819E1)[&rate=8.431556883464891E-4]:5.139199137604E1,(33[&rate=7.65844168826397E-4]:6.168052270403E1,13[&rate=4.8698784579766523E-4]:6.168052270403E1)[&rate=7.430692859521123E-4]:7.197294000204E0)[&rate=5.664647914866754E-4]:4.954867199756E-1,(19[&rate=7.543114148975648E-4]:1.11656049608E1,18[&rate=7.899079483443336E-4]:1.11656049608E1)[&rate=5.378361522666708E-4]:5.82076984634E1)[&rate=6.510664760678074E-4]:2.956210827959E0,((10[&rate=4.399364020784509E-4]:2.311607188263E1,31[&rate=4.2644971585100165E-4]:2.311607188263E1)[&rate=2.783198412502014E-4]:4.769953497209E1,23[&rate=4.645415414584643E-4]:7.081560685471E1)[&rate=5.280671237061158E-4]:1.51390739745E0)[&rate=5.280671237061158E-4]:3.962081972938E0,((12[&rate=0.0010377266400680458]:7.37789316306E1,((((((4[&rate=9.244818040026334E-4]:2.297948761694E0,3[&rate=3.7733128742950897E-4]:2.297948761694E0)[&rate=4.5257182584040054E-4]:3.902405967043E-1,2[&rate=7.213485219747466E-4]:2.688189358398E0)[&rate=5.378361522666708E-4]:7.984026202286E0,5[&rate=7.004879915411444E-4]:1.067221556068E1)[&rate=3.5539865731006335E-4]:2.532513442221E0,(1[&rate=5.474747025735147E-4]:9.191858856221E0,(6[&rate=5.852199000711016E-4]:8.507835985552E0,7[&rate=4.1184303752036735E-4]:8.507835985552E0)[&rate=6.70455233908509E-4]:6.84022870669E-1)[&rate=7.65844168826397E-4]:4.012870146684E0)[&rate=3.5539865731006335E-4]:5.698106701579E1,((30[&rate=7.899079483443336E-4]:4.78338386783E1,26[&rate=6.903279161530663E-4]:4.78338386783E1)[&rate=7.430692859521123E-4]:1.2776164575E1,32[&rate=6.226153163578962E-4]:6.061000325331E1)[&rate=5.758616679184684E-4]:9.575792765383E0)[&rate=5.945576838455782E-4]:5.363901846544E-1,(16[&rate=6.415137530348104E-4]:3.096979103831E1,((22[&rate=9.64389243533501E-4]:2.498131939007E0,21[&rate=8.893676942482614E-4]:2.498131939007E0)[&rate=0.0011012924215030087]:3.682759419915E0,20[&rate=9.244818040026334E-4]:6.180891358922E0)[&rate=0.001687432121652519]:2.478889967939E1)[&rate=8.893676942482614E-4]:3.975239516504E1)[&rate=8.893676942482614E-4]:3.056745427255E0)[&rate=5.080098258131665E-4]:1.612253542993E0,25[&rate=8.290821376316145E-4]:7.539118517359E1)[&rate=8.732135953292315E-4]:9.004110515088E-1)[&rate=8.290821376316145E-4]:2.433901519205E0,(17[&rate=9.244818040026334E-4]:6.614946927343E1,(27[&rate=5.280671237061158E-4]:2.586749853298E1,28[&rate=9.064126362264685E-4]:2.586749853298E1)[&rate=9.064126362264685E-4]:4.028197074045E1)[&rate=6.803228280785404E-4]:1.257602847087E1)[&rate=0.001687432121652519]:4.893845729086E1); +tree STATE_1430000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55133.600694501525,EEF_ucld_branchRates=-266.168517335019,lnP=-55133.600694501525,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.297317294209122E-4]:6.696908609474E0,9[&rate=6.13229223596863E-4]:6.696908609474E0)[&rate=3.4865904347525613E-4]:9.524894421299E0,15[&rate=3.110242343898536E-4]:1.622180303077E1)[&rate=6.473323724414366E-4]:9.510850828169E1,(14[&rate=0.0012766318523924382]:4.71097709767E1,24[&rate=8.282020964548449E-4]:4.71097709767E1)[&rate=9.858626085533263E-4]:6.422054033576E1)[&rate=6.13229223596863E-4]:6.217004436443E0,(((((((4[&rate=9.526233140142844E-4]:1.903070674221E0,2[&rate=5.612233167458301E-4]:1.903070674221E0)[&rate=5.612233167458301E-4]:1.052656958193E0,3[&rate=4.760055041376315E-4]:2.955727632414E0)[&rate=7.258457943464438E-4]:8.948028195741E0,5[&rate=3.244348253300856E-4]:1.190375582815E1)[&rate=3.810263305912398E-4]:2.527225365696E0,(1[&rate=2.797414720436004E-4]:9.404203999474E0,(6[&rate=3.4865904347525613E-4]:8.770327448283E0,7[&rate=5.712434676241928E-4]:8.770327448283E0)[&rate=6.024066172647704E-4]:6.338765511914E-1)[&rate=5.037478006676626E-4]:5.026777194377E0)[&rate=6.845152007474311E-4]:5.798416628372E1,((12[&rate=8.282020964548449E-4]:6.721164831747E1,(16[&rate=7.258457943464438E-4]:3.102261719076E1,((22[&rate=7.902547585901267E-4]:2.807853150029E0,21[&rate=2.3495948405539735E-4]:2.807853150029E0)[&rate=7.258457943464438E-4]:5.276954592525E0,20[&rate=7.902547585901267E-4]:8.084807742554E0)[&rate=0.0017165777367884637]:2.293780944821E1)[&rate=6.977665816242626E-4]:3.618903112671E1)[&rate=7.407960993152723E-4]:3.858806262331E0,((30[&rate=6.845152007474311E-4]:5.052149642274E1,26[&rate=4.1074184225312624E-4]:5.052149642274E1)[&rate=6.356652571668981E-4]:1.313560180522E1,32[&rate=2.3495948405539735E-4]:6.365709822796E1)[&rate=6.473323724414366E-4]:7.41335635184E0)[&rate=4.575913176648086E-4]:1.34469289777E0)[&rate=2.6016954914136686E-4]:2.985562719683E0,(25[&rate=7.407960993152723E-4]:7.454948757866E1,((((33[&rate=7.902547585901267E-4]:5.739504782319E1,13[&rate=3.4865904347525613E-4]:5.739504782319E1)[&rate=4.202957715167862E-4]:1.296283071257E1,(11[&rate=4.944625665496633E-4]:1.71442280954E1,29[&rate=4.575913176648086E-4]:1.71442280954E1)[&rate=5.416257423419832E-4]:5.321365044036E1)[&rate=4.1074184225312624E-4]:7.597966803079E-1,(19[&rate=8.491435965940325E-4]:1.153068591923E1,18[&rate=7.902547585901267E-4]:1.153068591923E1)[&rate=4.202957715167862E-4]:5.958698929684E1)[&rate=5.814346286318608E-4]:1.915907746852E0,((10[&rate=4.010382669618826E-4]:2.220676028084E1,31[&rate=6.593393222089163E-4]:2.220676028084E1)[&rate=3.810263305912398E-4]:5.033960885297E1,23[&rate=4.390772099068804E-4]:7.254636913381E1)[&rate=6.593393222089163E-4]:4.872138291033E-1)[&rate=0.0011873131682265602]:1.515904615739E0)[&rate=8.086362266734E-4]:8.512226185964E-1)[&rate=8.282020964548449E-4]:4.496828142512E0,(17[&rate=8.491435965940325E-4]:6.823938679106E1,(27[&rate=4.852203911524246E-4]:2.548502793971E1,28[&rate=0.0010678934202925385]:2.548502793971E1)[&rate=5.320151502616179E-4]:4.275435885134E1)[&rate=4.1074184225312624E-4]:1.165815154871E1)[&rate=0.0017165777367884637]:3.764977740914E1); +tree STATE_1440000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55156.437826486916,EEF_ucld_branchRates=-266.168517335019,lnP=-55156.437826486916,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.6763449412003465E-4]:9.55944449327E0,9[&rate=5.18232145699132E-4]:9.55944449327E0)[&rate=3.507462772851625E-4]:8.455445549075E0,15[&rate=3.6114190400920396E-4]:1.801489004235E1)[&rate=7.629408972720323E-4]:1.006167533833E2,(14[&rate=0.0011632794246071445]:5.470993996172E1,24[&rate=6.007610737943833E-4]:5.470993996172E1)[&rate=6.90491589613504E-4]:6.392170346394E1)[&rate=5.444605225538422E-4]:8.306581698488E0,((((((11[&rate=5.625487217730367E-4]:1.743186764712E1,29[&rate=4.927438635461598E-4]:1.743186764712E1)[&rate=7.036191683619339E-4]:5.450838448442E1,(33[&rate=6.318367885586309E-4]:6.010523865455E1,13[&rate=6.318367885586309E-4]:6.010523865455E1)[&rate=6.657796313894132E-4]:1.183501347699E1)[&rate=7.799781168569313E-4]:1.365971560606E0,(19[&rate=7.036191683619339E-4]:1.314591494521E1,18[&rate=7.981792323137271E-4]:1.314591494521E1)[&rate=4.080705352645022E-4]:6.016030874693E1)[&rate=3.281737873095204E-4]:3.579515806096E0,((10[&rate=5.909071918062615E-4]:2.042679258062E1,31[&rate=7.469063632355727E-4]:2.042679258062E1)[&rate=3.9915696812053606E-4]:5.351556229338E1,23[&rate=4.927438635461598E-4]:7.3942354874E1)[&rate=5.356121192832149E-4]:2.943384624238E0)[&rate=4.254683298520324E-4]:3.054790367743E0,(25[&rate=6.318367885586309E-4]:7.851503158961E1,(((((4[&rate=3.6114190400920396E-4]:2.569404019379E0,3[&rate=4.50887027457125E-4]:2.569404019379E0)[&rate=7.799781168569313E-4]:2.828729934984E-1,2[&rate=2.035863122060931E-4]:2.852277012877E0)[&rate=0.0010878906470657048]:1.069701669807E1,5[&rate=6.108507838744991E-4]:1.354929371095E1)[&rate=4.340086319345951E-4]:1.66672248829E0,(1[&rate=4.592640288257776E-4]:9.796700694433E0,(6[&rate=5.71820522201754E-4]:9.497608342193E0,7[&rate=3.7110585170321055E-4]:9.497608342193E0)[&rate=9.864106571784458E-4]:2.990923522397E-1)[&rate=5.26874109237536E-4]:5.419315504807E0)[&rate=6.318367885586309E-4]:5.975951197309E1,(((16[&rate=2.6763449412003465E-4]:2.979351973218E1,((22[&rate=4.16830965231426E-4]:3.394136052252E0,21[&rate=3.156228068495574E-4]:3.394136052252E0)[&rate=7.036191683619339E-4]:4.003428088577E0,20[&rate=3.0181507824726916E-4]:7.397564140829E0)[&rate=0.0015292467207216301]:2.239595559135E1)[&rate=8.177458859774683E-4]:3.90306553297E1,12[&rate=9.162049715588045E-4]:6.882417506188E1)[&rate=4.16830965231426E-4]:4.466706586657E0,((30[&rate=7.036191683619339E-4]:4.779890619754E1,26[&rate=6.007610737943833E-4]:4.779890619754E1)[&rate=7.036191683619339E-4]:1.26672178269E1,32[&rate=4.080705352645022E-4]:6.046612402443E1)[&rate=4.50887027457125E-4]:1.282475762411E1)[&rate=4.676227472974153E-4]:1.684646523785E0)[&rate=7.469063632355727E-4]:3.539503417286E0)[&rate=7.799781168569313E-4]:1.425498276367E0)[&rate=3.807218179432775E-4]:2.753343605122E0,(17[&rate=8.876322301543873E-4]:6.744065385962E1,(27[&rate=6.540911763938062E-4]:2.297006268792E1,28[&rate=8.177458859774683E-4]:2.297006268792E1)[&rate=5.534341973859948E-4]:4.447059117171E1)[&rate=4.080705352645022E-4]:1.525321961148E1)[&rate=0.0015292467207216301]:4.424435165304E1); +tree STATE_1450000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55149.05309882678,EEF_ucld_branchRates=-266.168517335019,lnP=-55149.05309882678,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.036856012933165E-4]:8.047622462807E0,9[&rate=7.274724279311377E-4]:8.047622462807E0)[&rate=3.7510030485838757E-4]:7.206445773086E0,15[&rate=3.461185576535476E-4]:1.525406823589E1)[&rate=8.263454258946099E-4]:9.681637875805E1,(14[&rate=0.001384288181343608]:5.325579813316E1,24[&rate=6.393674170843887E-4]:5.325579813316E1)[&rate=8.43375440023308E-4]:5.881464886078E1)[&rate=6.294078235284257E-4]:1.138556029405E1,(((((((11[&rate=6.704141562730126E-4]:1.747858804207E1,29[&rate=4.527084599049553E-4]:1.747858804207E1)[&rate=7.949100218371862E-4]:5.051371236513E1,(33[&rate=8.43375440023308E-4]:6.022354781552E1,13[&rate=6.196108332609429E-4]:6.022354781552E1)[&rate=3.083853664798067E-4]:7.76875259168E0)[&rate=0.0010793651134835384]:2.755089773435E0,(19[&rate=9.753464580252881E-4]:1.13574166349E1,18[&rate=5.270442686019902E-4]:1.13574166349E1)[&rate=4.4278963098648444E-4]:5.938997354573E1)[&rate=4.719429596590307E-4]:1.506133633603E0,((10[&rate=4.624131643987955E-4]:2.176016501524E1,31[&rate=7.66310810286895E-4]:2.176016501524E1)[&rate=5.089160961351947E-4]:4.96231479406E1,23[&rate=6.923052126733147E-4]:7.138331295584E1)[&rate=9.238997945944608E-4]:8.702108584006E-1)[&rate=5.179933556066841E-4]:2.596309983257E0,25[&rate=6.704141562730126E-4]:7.484983379749E1)[&rate=6.704141562730126E-4]:1.354016901687E0,((((((4[&rate=8.807521195303425E-4]:1.713959457185E0,2[&rate=7.153964039272457E-4]:1.713959457185E0)[&rate=4.997938623898211E-4]:6.11888131647E-1,3[&rate=5.451354016549759E-4]:2.325847588832E0)[&rate=7.802975093224094E-4]:1.033076655791E1,5[&rate=4.221106101323324E-4]:1.265661414674E1)[&rate=8.807521195303425E-4]:1.489706598586E0,(1[&rate=2.8172450740630985E-4]:8.93520912582E0,(6[&rate=8.614548667353845E-4]:8.241306195753E0,7[&rate=3.461185576535476E-4]:8.241306195753E0)[&rate=0.0010054800123234953]:6.939029300674E-1)[&rate=5.54207596802661E-4]:5.211111619505E0)[&rate=7.66310810286895E-4]:5.827324940911E1,(((30[&rate=6.923052126733147E-4]:4.839495889385E1,26[&rate=7.036856012933165E-4]:4.839495889385E1)[&rate=8.263454258946099E-4]:1.224710042492E1,32[&rate=3.878624151823843E-4]:6.064205931878E1)[&rate=4.997938623898211E-4]:1.035854103192E1,(16[&rate=3.998455141642531E-4]:3.071393986184E1,((22[&rate=7.802975093224094E-4]:2.805347582305E0,21[&rate=4.527084599049553E-4]:2.805347582305E0)[&rate=5.817119199353388E-4]:3.533728830489E0,20[&rate=4.8133111610875547E-4]:6.339076412794E0)[&rate=0.0016445428389015987]:2.437486344905E1)[&rate=6.099589931808033E-4]:4.028666048886E1)[&rate=9.238997945944608E-4]:1.418969803731E0)[&rate=2.8172450740630985E-4]:1.235834245285E0,12[&rate=6.004357197927499E-4]:7.365540439972E1)[&rate=3.998455141642531E-4]:2.548446299465E0)[&rate=6.704141562730126E-4]:2.709154082965E0,(17[&rate=5.910251415819451E-4]:6.951835005877E1,(27[&rate=4.624131643987955E-4]:2.054067739991E1,28[&rate=0.001126746594118679]:2.054067739991E1)[&rate=7.802975093224094E-4]:4.897767265886E1)[&rate=4.719429596590307E-4]:9.394654723377E0)[&rate=0.0016445428389015987]:4.454300250585E1); +tree STATE_1460000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55116.36038457488,EEF_ucld_branchRates=-266.168517335019,lnP=-55116.36038457488,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.069942096142939E-4]:6.650339422396E0,9[&rate=7.555000727304851E-4]:6.650339422396E0)[&rate=7.20625491922221E-4]:7.749894110379E0,15[&rate=7.555000727304851E-4]:1.440023353277E1)[&rate=6.274375314161377E-4]:1.063857280797E2,(14[&rate=9.01504489437422E-4]:4.891840760983E1,24[&rate=8.210357175097207E-4]:4.891840760983E1)[&rate=9.620543804149059E-4]:7.186755400269E1)[&rate=9.203560642007624E-4]:9.182656694362E0,((((12[&rate=8.069942096142939E-4]:7.272772629693E1,((16[&rate=4.912745157167657E-4]:3.168624255577E1,((22[&rate=8.356542888484572E-4]:2.62990747603E0,21[&rate=6.471352936354774E-4]:2.62990747603E0)[&rate=9.853953301749015E-4]:4.599903895404E0,20[&rate=3.0926472868732187E-4]:7.229811371434E0)[&rate=0.0017296264252199419]:2.445643118434E1)[&rate=0.0010388989166455619]:4.070391624939E1,(((((4[&rate=0.0011468708319990843]:1.773190771478E0,3[&rate=8.837381753066715E-4]:1.773190771478E0)[&rate=8.837381753066715E-4]:4.913183454797E-1,2[&rate=6.880449250855183E-4]:2.264509116958E0)[&rate=5.015476739437845E-4]:9.82459214162E0,5[&rate=3.0926472868732187E-4]:1.208910125858E1)[&rate=6.471352936354774E-4]:1.125600045102E0,(6[&rate=6.37237095455011E-4]:9.042670592982E0,(1[&rate=5.410700163464529E-4]:8.274079007887E0,7[&rate=3.780599013181032E-4]:8.274079007887E0)[&rate=3.780599013181032E-4]:7.685915850959E-1)[&rate=9.853953301749015E-4]:4.172030710697E0)[&rate=5.215588046167593E-4]:5.745998618373E1,((30[&rate=7.20625491922221E-4]:4.922870981906E1,26[&rate=5.410700163464529E-4]:4.922870981906E1)[&rate=0.0010702052195450662]:1.089303599161E1,32[&rate=4.8076916414170617E-4]:6.012174581068E1)[&rate=5.116305851224721E-4]:1.055294167673E1)[&rate=4.0891728259225294E-4]:1.715471317754E0)[&rate=7.435759380876085E-4]:3.375674917608E-1)[&rate=6.080716932423732E-4]:2.777904421321E0,25[&rate=6.672923996130411E-4]:7.550563071825E1)[&rate=7.555000727304851E-4]:2.699856068735E0,((((11[&rate=4.352179721075559E-4]:1.66505822036E1,29[&rate=8.509201550868989E-4]:1.66505822036E1)[&rate=7.555000727304851E-4]:5.396803356968E1,(33[&rate=9.203560642007624E-4]:6.087965745498E1,13[&rate=4.5884881517244943E-4]:6.087965745498E1)[&rate=9.01504489437422E-4]:9.738958318308E0)[&rate=5.602859033441192E-4]:1.845538078181E0,(19[&rate=0.001195967829835455]:9.717558396715E0,18[&rate=7.435759380876085E-4]:9.717558396715E0)[&rate=4.912745157167657E-4]:6.274659545475E1)[&rate=4.352179721075559E-4]:4.181593093109E0,((10[&rate=6.880449250855183E-4]:2.150927809634E1,31[&rate=5.410700163464529E-4]:2.150927809634E1)[&rate=3.377896488771046E-4]:5.473975757507E1,23[&rate=5.889134978649469E-4]:7.624903567141E1)[&rate=4.912745157167657E-4]:3.967112731633E-1)[&rate=7.095435638510153E-4]:1.55973984241E0)[&rate=4.352179721075559E-4]:3.904353559503E0,(17[&rate=8.356542888484572E-4]:7.032617028396E1,(27[&rate=5.015476739437845E-4]:2.391560797935E1,28[&rate=0.0013385474694984493]:2.391560797935E1)[&rate=6.986908057311223E-4]:4.641056230461E1)[&rate=5.698361493186029E-4]:1.178367006252E1)[&rate=0.0017296264252199419]:4.785877796039E1); +tree STATE_1470000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55171.10859955921,EEF_ucld_branchRates=-266.168517335019,lnP=-55171.10859955921,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.029834648675939E-4]:7.905655787429E0,9[&rate=6.830034347410179E-4]:7.905655787429E0)[&rate=4.894024652467166E-4]:5.333153541292E0,15[&rate=7.700617141881774E-4]:1.323880932872E1)[&rate=4.98443806859593E-4]:1.148333612364E2,(14[&rate=0.001047178509430801]:5.240629374215E1,24[&rate=9.107716371658064E-4]:5.240629374215E1)[&rate=5.160967473291032E-4]:7.566587682296E1)[&rate=6.830034347410179E-4]:1.466708868384E0,((((12[&rate=8.392093211686843E-4]:7.208315250956E1,((16[&rate=3.7737471027482066E-4]:3.179710908811E1,((22[&rate=8.095502272361342E-4]:2.682901470203E0,21[&rate=3.9220735236556917E-4]:2.682901470203E0)[&rate=5.160967473291032E-4]:4.179640512749E0,20[&rate=7.133446570940516E-4]:6.862541982952E0)[&rate=0.0015280166764625157]:2.493456710515E1)[&rate=5.842400727239504E-4]:3.867717998625E1,(((((4[&rate=8.239867864456607E-4]:1.558016477962E0,3[&rate=7.579412723624248E-4]:1.558016477962E0)[&rate=7.029834648675939E-4]:3.879476835955E-1,2[&rate=6.453943547296622E-4]:1.945964161558E0)[&rate=6.638598917456294E-4]:7.706287495968E0,5[&rate=5.247613874691316E-4]:9.652251657526E0)[&rate=6.638598917456294E-4]:2.522055880065E0,(1[&rate=4.98443806859593E-4]:7.856398140655E0,(6[&rate=8.239867864456607E-4]:7.047980200952E0,7[&rate=6.274696496580309E-4]:7.047980200952E0)[&rate=4.801755006822578E-4]:8.084179397025E-1)[&rate=4.894024652467166E-4]:4.317909396936E0)[&rate=4.801755006822578E-4]:5.614864538838E1,((30[&rate=8.909118224003037E-4]:4.561295276316E1,26[&rate=5.418772213813261E-4]:4.561295276316E1)[&rate=6.099631318655953E-4]:1.583218037892E1,32[&rate=7.958025559422418E-4]:6.144513314209E1)[&rate=6.099631318655953E-4]:6.877819783885E0)[&rate=6.013309593292333E-4]:2.151336148378E0)[&rate=7.700617141881774E-4]:1.608863435207E0)[&rate=4.98443806859593E-4]:1.973775145427E0,25[&rate=7.349460570053993E-4]:7.405692765499E1)[&rate=3.1372423703276444E-4]:1.412619337305E0,(((19[&rate=5.073324629160769E-4]:1.281026057876E1,18[&rate=8.392093211686843E-4]:1.281026057876E1)[&rate=3.4024115481442064E-4]:5.756192304526E1,((33[&rate=7.133446570940516E-4]:6.353617458716E1,13[&rate=4.404943325623336E-4]:6.353617458716E1)[&rate=7.133446570940516E-4]:5.175737992168E0,(11[&rate=6.830034347410179E-4]:1.56527749122E1,29[&rate=4.6100085363266996E-4]:1.56527749122E1)[&rate=5.503661216561566E-4]:5.305913766712E1)[&rate=3.1372423703276444E-4]:1.66027104469E0)[&rate=0.0010883376640127263]:1.735517316768E0,((10[&rate=8.392093211686843E-4]:2.231393602638E1,31[&rate=8.553354139359847E-4]:2.231393602638E1)[&rate=3.4024115481442064E-4]:4.926372679982E1,23[&rate=4.295446499087731E-4]:7.15776628262E1)[&rate=4.056122600478204E-4]:5.300381145819E-1)[&rate=5.672893661131775E-4]:3.361846051509E0)[&rate=9.826218193015558E-4]:3.978638611129E0,(17[&rate=9.107716371658064E-4]:7.202688853209E1,(27[&rate=6.733375989165151E-4]:1.970942630571E1,28[&rate=0.0011393881823691721]:1.970942630571E1)[&rate=7.029834648675939E-4]:5.231746222638E1)[&rate=9.826218193015558E-4]:7.421297071327E0)[&rate=0.0015280166764625157]:5.009069383007E1); +tree STATE_1480000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55153.505002114514,EEF_ucld_branchRates=-266.168517335019,lnP=-55153.505002114514,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.515942999335996E-4]:8.111191991398E0,9[&rate=7.770520388887798E-4]:8.111191991398E0)[&rate=8.515942999335996E-4]:6.538039156347E0,15[&rate=3.534183348802749E-4]:1.464923114775E1)[&rate=7.606654469060689E-4]:1.133485445431E2,(14[&rate=0.001526949220559974]:5.290932308987E1,24[&rate=8.122933564803687E-4]:5.290932308987E1)[&rate=8.122933564803687E-4]:7.508845260102E1)[&rate=4.794855941168897E-4]:5.182892098763E-1,(((((((16[&rate=6.497935777521456E-4]:2.995142424221E1,((22[&rate=6.377449448403703E-4]:2.437454830559E0,21[&rate=4.0910456482227834E-4]:2.437454830559E0)[&rate=3.1363868732344234E-4]:3.668100235245E0,20[&rate=9.211445188166211E-4]:6.105555065804E0)[&rate=0.0010476211491425985]:2.384586917641E1)[&rate=9.482019217525447E-4]:4.118448115319E1,((30[&rate=4.992815885182697E-4]:4.697026098456E1,26[&rate=6.879597186933498E-4]:4.697026098456E1)[&rate=0.0011980583876551733]:1.106656605598E1,32[&rate=6.748680929484716E-4]:5.803682704054E1)[&rate=4.39753010779517E-4]:1.309907835486E1)[&rate=0.0010897485718493732]:3.846593888389E0,((((4[&rate=0.0013726221813233068]:1.852818967921E0,3[&rate=4.39753010779517E-4]:1.852818967921E0)[&rate=2.6023799848845996E-4]:2.174421762805E-1,2[&rate=8.515942999335996E-4]:2.070261144201E0)[&rate=7.94227864890267E-4]:8.397772626827E0,5[&rate=3.409710174720992E-4]:1.046803377103E1)[&rate=4.0910456482227834E-4]:2.907412396608E0,(1[&rate=4.1945847826399714E-4]:8.833405872679E0,(6[&rate=4.497556242222686E-4]:7.971726228748E0,7[&rate=5.394614077587493E-4]:7.971726228748E0)[&rate=2.6023799848845996E-4]:8.616796439311E-1)[&rate=4.0910456482227834E-4]:4.542040294958E0)[&rate=4.1945847826399714E-4]:6.160705311615E1)[&rate=4.497556242222686E-4]:9.84953950183E-1,12[&rate=7.94227864890267E-4]:7.596745323397E1)[&rate=6.621575593933638E-4]:1.799239881719E0,25[&rate=8.313677686782239E-4]:7.776669311569E1)[&rate=1.9095587101538076E-4]:6.001175262771E-1,(((19[&rate=8.515942999335996E-4]:1.277350804947E1,18[&rate=6.377449448403703E-4]:1.277350804947E1)[&rate=4.296635768263673E-4]:5.825439335129E1,((11[&rate=6.879597186933498E-4]:1.686077720508E1,29[&rate=5.601117688794101E-4]:1.686077720508E1)[&rate=7.154448659093118E-4]:5.311191389026E1,(33[&rate=6.748680929484716E-4]:6.479791915683E1,13[&rate=2.981561273049191E-4]:6.479791915683E1)[&rate=3.9856304330363205E-4]:5.174771938515E0)[&rate=6.25983287935313E-4]:1.055210305419E0)[&rate=7.014709213987178E-4]:1.981227272667E0,((10[&rate=5.813157722595066E-4]:1.885130109391E1,31[&rate=6.879597186933498E-4]:1.885130109391E1)[&rate=2.339360368627344E-4]:5.278888614155E1,23[&rate=6.032190650988706E-4]:7.164018723546E1)[&rate=3.277897841538219E-4]:1.368941437968E0)[&rate=4.893733698110038E-4]:5.357681968538E0)[&rate=0.0011389170519645363]:1.660607744705E0,(17[&rate=6.497935777521456E-4]:7.351825088599E1,(27[&rate=5.601117688794101E-4]:2.314173504921E1,28[&rate=9.482019217525447E-4]:2.314173504921E1)[&rate=4.1945847826399714E-4]:5.037651583678E1)[&rate=5.394614077587493E-4]:6.509167500688E0)[&rate=0.0018706334989808712]:4.848864651409E1); +tree STATE_1490000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55134.90850656344,EEF_ucld_branchRates=-266.168517335019,lnP=-55134.90850656344,RHOD_ucld_branchRates=-266.168517335019] = [&R] 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+tree STATE_1500000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.46360697245,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.46360697245,RHOD_ucld_branchRates=-266.168517335019] = [&R] 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+End; diff --git a/example_files/pxlssq_example/Alignment b/example_files/pxlssq_example/Alignment new file mode 100644 index 0000000..ad64086 --- /dev/null +++ b/example_files/pxlssq_example/Alignment @@ -0,0 +1,16 @@ +>Sequence1 +AAATTTCCCTTTCCCTTTAAAAATTTCCCTTTCCCTTTAAAAAATTTCCCTTTCCCTTTAAAAATTTCCCTTTCCCTTTAAA +>Sequence2 +GGGGGGGGGGCCCCCCCCCCGGGGGGGGGGCCCCCCCCCCAGGGGGGGGGGCCCCCCCCCCGGGGGGGGGGCCCCCCCCCCA +>Sequence3 +CCCCCCCCCCCCAAAAAAAACCCCCCCCCCCCAAAAAAAAACCCCCCCCCCCCAAAAAAAACCCCCCCCCCCCAAAAAAAAA +>Sequence4 +TTTTTTTTCCCCCCCGGGGGNNNNNNNNNNNNNNNNNNNNNTTTTTTTTCCCCCCCGGGGGNNNNNNNNNNNNNNNNNNNNN +>Sequence9 +NNNNNNNNNNNNNNNNNNNNAAATTTCCCTTTCCCTTTAAANNNNNNNNNNNNNNNNNNNNAAATTTCCCTTTCCCTTTAAA +>Sequence10 +NNNNNNNNNNNNNNNNNNNNGGGGGGGGGGCCCCCCCCCCANNNNNNNNNNNNNNNNNNNNGGGGGGGGGGCCCCCCCCCCA +>Sequence11 +NNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCAAAAAAAAANNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCAAAAAAAAA +>Sequence8 +NNNNNNNNNNNNNNNNNNNNTTTTTTTTCCCCCCCGGGGGANNNNNNNNNNNNNNNNNNNNTTTTTTTTCCCCCCCGGGGGA diff --git a/example_files/pxlstr_example/Tree.tre b/example_files/pxlstr_example/Tree.tre new file mode 100644 index 0000000..d493d9b --- /dev/null +++ b/example_files/pxlstr_example/Tree.tre @@ -0,0 +1 @@ +(((((s19:8.919229497,s21:8.919229494):19.95224961,(((s28:1.946092244,(s29:1.087576191,(s30:0.892917128,s31:0.892917128):0.1946590628):0.8585160526):8.3971209,s32:10.34321315):11.09543257,((s33:7.226304805,((s34:2.670349682,s35:2.670349682):2.222933978,s36:4.89328366):2.333021145):7.192871235,((s38:0.6421928454,s39:0.6421928454):0.0263742241,s40:0.6685670695):13.75060897):7.019469682):7.432833389):9.421849134,(((s46:12.20104112,s49:12.20104112):6.604755154,(s51:5.415238384,s52:5.415238384):13.39055789):7.973707395,s56:26.77950367):11.51382458):38.80946142,(((((s87:3.690843889,s88:3.690843889):11.45073371,(((s90:4.720117293,(s91:3.997568422,s92:3.997568422):0.722548871):1.54594792,(s93:2.198184551,s94:2.198184551):4.067880663):0.4042469457,s95:6.670312157):8.47126544):12.39306906,((s98:5.074415446,s100:5.074415446):14.97270317,s104:20.04711862):7.487528037):20.7336537,s126:48.26830035):16.54193839,((((s133:19.19452408,(s135:5.458627874,(s136:0.5006869268,s137:0.5006869268):4.957940945):13.73589621):8.335064656,s140:27.52958874):2.286174247,((s151:16.86265353,((s153:3.929431493,s154:3.929431493):0.5895208589,(s155:4.477463366,(s156:2.7123332,s157:2.7123332):1.765130166):0.04148898642):12.34370117):11.43773361,s162:28.30038714):1.515375849):2.627722159,((s169:7.840935141,s170:7.840935141):7.594637575,(s172:13.32986006,(s173:6.721414978,((s174:0.3080707103,s175:0.3080707103):4.107433663,s177:4.415504373):2.305910603):6.608445087):2.105712657):17.00791243):32.3667536):12.29255092):22.89721033,((((((((s213:0.2029741842,s214:0.2029741842):12.71610281,((s216:5.616429623,(s218:3.713394097,s219:3.713394097):1.903035527):3.114968709,(s221:4.941089359,s222:4.941089361):3.790308973):4.187678662):2.781171964,s224:15.70024896):8.113641143,(s228:16.40398772,s229:16.40398772):7.409902377):20.19393189,(((s235:1.164761961,s237:1.164761961):30.92897799,(((s239:11.80920341,(s240:1.145193454,s241:1.145193454):10.66400996):6.476060724,(s243:5.366328664,s244:5.366328664):12.91893548):0.5879546054,((s246:1.021385454,s247:1.021385454):2.278992972,s248:3.300378425):15.57284032):13.22052121):1.942298314,((((s252:0.8909838051,s253:0.8909838051):1.446077873,(s254:0.5364767172,s255:0.5364767172):1.800584961):0.5351456596,s256:2.872207338):1.872321111,s257:4.744528449):29.29150981):9.971783723):17.83929796,(s266:27.92939399,(s268:4.234731747,s269:4.234731747):23.69466224):33.91772596):17.52852757,(((((((s283:0.4995078195,s284:0.4995078195):2.376658579,s285:2.876166399):13.2757501,s286:16.15191649):14.55523323,(s288:9.130600983,(s289:5.339503764,s290:5.339503764):3.791097218):21.57654874):2.471388135,((s292:0.1094902985,s293:0.1094902985):21.11008484,s296:21.21957514):11.95896272):12.97210001,s307:46.15063787):9.351516506,(s325:1.575825061,s326:1.575825061):53.92632932):23.87349314):10.77139891,(((s340:9.940550523,s341:9.940550523):21.02957737,((s345:9.069122675,s347:9.069122677):1.968266562,(s348:7.197873819,s350:7.197873819):3.839515418):19.93273866):45.33019168,(s381:4.52614792,s382:4.52614792):71.77417166):13.84672685):9.852953562); diff --git a/example_files/pxmrca_example/mrca.txt b/example_files/pxmrca_example/mrca.txt new file mode 100644 index 0000000..0795ae8 --- /dev/null +++ b/example_files/pxmrca_example/mrca.txt @@ -0,0 +1,3 @@ +KIM = s28 s87 +THURSTON=s19 s21 +LEE =s292 s296 s307 diff --git a/example_files/pxmrca_example/mrca_test.tre b/example_files/pxmrca_example/mrca_test.tre new file mode 100644 index 0000000..d493d9b --- /dev/null +++ b/example_files/pxmrca_example/mrca_test.tre @@ -0,0 +1 @@ +(((((s19:8.919229497,s21:8.919229494):19.95224961,(((s28:1.946092244,(s29:1.087576191,(s30:0.892917128,s31:0.892917128):0.1946590628):0.8585160526):8.3971209,s32:10.34321315):11.09543257,((s33:7.226304805,((s34:2.670349682,s35:2.670349682):2.222933978,s36:4.89328366):2.333021145):7.192871235,((s38:0.6421928454,s39:0.6421928454):0.0263742241,s40:0.6685670695):13.75060897):7.019469682):7.432833389):9.421849134,(((s46:12.20104112,s49:12.20104112):6.604755154,(s51:5.415238384,s52:5.415238384):13.39055789):7.973707395,s56:26.77950367):11.51382458):38.80946142,(((((s87:3.690843889,s88:3.690843889):11.45073371,(((s90:4.720117293,(s91:3.997568422,s92:3.997568422):0.722548871):1.54594792,(s93:2.198184551,s94:2.198184551):4.067880663):0.4042469457,s95:6.670312157):8.47126544):12.39306906,((s98:5.074415446,s100:5.074415446):14.97270317,s104:20.04711862):7.487528037):20.7336537,s126:48.26830035):16.54193839,((((s133:19.19452408,(s135:5.458627874,(s136:0.5006869268,s137:0.5006869268):4.957940945):13.73589621):8.335064656,s140:27.52958874):2.286174247,((s151:16.86265353,((s153:3.929431493,s154:3.929431493):0.5895208589,(s155:4.477463366,(s156:2.7123332,s157:2.7123332):1.765130166):0.04148898642):12.34370117):11.43773361,s162:28.30038714):1.515375849):2.627722159,((s169:7.840935141,s170:7.840935141):7.594637575,(s172:13.32986006,(s173:6.721414978,((s174:0.3080707103,s175:0.3080707103):4.107433663,s177:4.415504373):2.305910603):6.608445087):2.105712657):17.00791243):32.3667536):12.29255092):22.89721033,((((((((s213:0.2029741842,s214:0.2029741842):12.71610281,((s216:5.616429623,(s218:3.713394097,s219:3.713394097):1.903035527):3.114968709,(s221:4.941089359,s222:4.941089361):3.790308973):4.187678662):2.781171964,s224:15.70024896):8.113641143,(s228:16.40398772,s229:16.40398772):7.409902377):20.19393189,(((s235:1.164761961,s237:1.164761961):30.92897799,(((s239:11.80920341,(s240:1.145193454,s241:1.145193454):10.66400996):6.476060724,(s243:5.366328664,s244:5.366328664):12.91893548):0.5879546054,((s246:1.021385454,s247:1.021385454):2.278992972,s248:3.300378425):15.57284032):13.22052121):1.942298314,((((s252:0.8909838051,s253:0.8909838051):1.446077873,(s254:0.5364767172,s255:0.5364767172):1.800584961):0.5351456596,s256:2.872207338):1.872321111,s257:4.744528449):29.29150981):9.971783723):17.83929796,(s266:27.92939399,(s268:4.234731747,s269:4.234731747):23.69466224):33.91772596):17.52852757,(((((((s283:0.4995078195,s284:0.4995078195):2.376658579,s285:2.876166399):13.2757501,s286:16.15191649):14.55523323,(s288:9.130600983,(s289:5.339503764,s290:5.339503764):3.791097218):21.57654874):2.471388135,((s292:0.1094902985,s293:0.1094902985):21.11008484,s296:21.21957514):11.95896272):12.97210001,s307:46.15063787):9.351516506,(s325:1.575825061,s326:1.575825061):53.92632932):23.87349314):10.77139891,(((s340:9.940550523,s341:9.940550523):21.02957737,((s345:9.069122675,s347:9.069122677):1.968266562,(s348:7.197873819,s350:7.197873819):3.839515418):19.93273866):45.33019168,(s381:4.52614792,s382:4.52614792):71.77417166):13.84672685):9.852953562); diff --git a/example_files/pxmrcacut_example/mrca.txt b/example_files/pxmrcacut_example/mrca.txt new file mode 100644 index 0000000..0795ae8 --- /dev/null +++ b/example_files/pxmrcacut_example/mrca.txt @@ -0,0 +1,3 @@ +KIM = s28 s87 +THURSTON=s19 s21 +LEE =s292 s296 s307 diff --git a/example_files/pxmrcacut_example/mrca_test.tre b/example_files/pxmrcacut_example/mrca_test.tre new file mode 100644 index 0000000..d493d9b --- /dev/null +++ b/example_files/pxmrcacut_example/mrca_test.tre @@ -0,0 +1 @@ +(((((s19:8.919229497,s21:8.919229494):19.95224961,(((s28:1.946092244,(s29:1.087576191,(s30:0.892917128,s31:0.892917128):0.1946590628):0.8585160526):8.3971209,s32:10.34321315):11.09543257,((s33:7.226304805,((s34:2.670349682,s35:2.670349682):2.222933978,s36:4.89328366):2.333021145):7.192871235,((s38:0.6421928454,s39:0.6421928454):0.0263742241,s40:0.6685670695):13.75060897):7.019469682):7.432833389):9.421849134,(((s46:12.20104112,s49:12.20104112):6.604755154,(s51:5.415238384,s52:5.415238384):13.39055789):7.973707395,s56:26.77950367):11.51382458):38.80946142,(((((s87:3.690843889,s88:3.690843889):11.45073371,(((s90:4.720117293,(s91:3.997568422,s92:3.997568422):0.722548871):1.54594792,(s93:2.198184551,s94:2.198184551):4.067880663):0.4042469457,s95:6.670312157):8.47126544):12.39306906,((s98:5.074415446,s100:5.074415446):14.97270317,s104:20.04711862):7.487528037):20.7336537,s126:48.26830035):16.54193839,((((s133:19.19452408,(s135:5.458627874,(s136:0.5006869268,s137:0.5006869268):4.957940945):13.73589621):8.335064656,s140:27.52958874):2.286174247,((s151:16.86265353,((s153:3.929431493,s154:3.929431493):0.5895208589,(s155:4.477463366,(s156:2.7123332,s157:2.7123332):1.765130166):0.04148898642):12.34370117):11.43773361,s162:28.30038714):1.515375849):2.627722159,((s169:7.840935141,s170:7.840935141):7.594637575,(s172:13.32986006,(s173:6.721414978,((s174:0.3080707103,s175:0.3080707103):4.107433663,s177:4.415504373):2.305910603):6.608445087):2.105712657):17.00791243):32.3667536):12.29255092):22.89721033,((((((((s213:0.2029741842,s214:0.2029741842):12.71610281,((s216:5.616429623,(s218:3.713394097,s219:3.713394097):1.903035527):3.114968709,(s221:4.941089359,s222:4.941089361):3.790308973):4.187678662):2.781171964,s224:15.70024896):8.113641143,(s228:16.40398772,s229:16.40398772):7.409902377):20.19393189,(((s235:1.164761961,s237:1.164761961):30.92897799,(((s239:11.80920341,(s240:1.145193454,s241:1.145193454):10.66400996):6.476060724,(s243:5.366328664,s244:5.366328664):12.91893548):0.5879546054,((s246:1.021385454,s247:1.021385454):2.278992972,s248:3.300378425):15.57284032):13.22052121):1.942298314,((((s252:0.8909838051,s253:0.8909838051):1.446077873,(s254:0.5364767172,s255:0.5364767172):1.800584961):0.5351456596,s256:2.872207338):1.872321111,s257:4.744528449):29.29150981):9.971783723):17.83929796,(s266:27.92939399,(s268:4.234731747,s269:4.234731747):23.69466224):33.91772596):17.52852757,(((((((s283:0.4995078195,s284:0.4995078195):2.376658579,s285:2.876166399):13.2757501,s286:16.15191649):14.55523323,(s288:9.130600983,(s289:5.339503764,s290:5.339503764):3.791097218):21.57654874):2.471388135,((s292:0.1094902985,s293:0.1094902985):21.11008484,s296:21.21957514):11.95896272):12.97210001,s307:46.15063787):9.351516506,(s325:1.575825061,s326:1.575825061):53.92632932):23.87349314):10.77139891,(((s340:9.940550523,s341:9.940550523):21.02957737,((s345:9.069122675,s347:9.069122677):1.968266562,(s348:7.197873819,s350:7.197873819):3.839515418):19.93273866):45.33019168,(s381:4.52614792,s382:4.52614792):71.77417166):13.84672685):9.852953562); diff --git a/example_files/pxmrcacut_example/out.txt b/example_files/pxmrcacut_example/out.txt new file mode 100644 index 0000000..5067944 --- /dev/null +++ b/example_files/pxmrcacut_example/out.txt @@ -0,0 +1,4 @@ +100 +((((s19:8.9192294969999998955,s21:8.9192294939999996473):19.95224960999999908,(((s28:1.9460922439999999156,(s29:1.0875761909999999144,(s30:0.89291712800000000438,s31:0.89291712800000000438):0.1946590628000000045):0.85851605259999996811):8.3971209000000008871,s32:10.343213150000000411):11.095432569999999828,((s33:7.2263048049999998312,((s34:2.6703496819999998912,s35:2.6703496819999998912):2.2229339779999999216,s36:4.8932836599999998128):2.3330211450000000184):7.1928712350000001408,((s38:0.64219284539999998973,s39:0.64219284539999998973):0.026374224099999999532,s40:0.66856706949999999967):13.750608970000000042):7.0194696820000004323):7.4328333889999997908):9.4218491340000003476,(((s46:12.201041119999999296,s49:12.201041119999999296):6.604755154000000239,(s51:5.415238384000000238,s52:5.415238384000000238):13.390557890000000185):7.9737073949999999201,s56:26.779503670000000426):11.513824579999999642):38.8094614199999981,(((((s87:3.6908438889999999333,s88:3.6908438889999999333):11.450733709999999732,(((s90:4.7201172930000003802,(s91:3.9975684220000000657,s92:3.9975684220000000657):0.72254887099999998146):1.5459479199999999199,(s93:2.1981845510000002086,s94:2.1981845510000002086):4.0678806630000003963):0.40424694570000002658,s95:6.6703121569999996865):8.4712654399999998134):12.393069060000000192,((s98:5.0744154459999997187,s100:5.0744154459999997187):14.972703170000000839,s104:20.047118619999999112):7.4875280369999996921):20.733653700000001407,s126:48.268300349999996968):16.541938389999998549,((((s133:19.194524080000000765,(s135:5.4586278740000002685,(s136:0.5006869268000000428,s137:0.5006869268000000428):4.9579409449999998216):13.73589620999999994):8.3350646560000001273,s140:27.529588740000001224):2.2861742469999999372,((s151:16.862653529999999336,((s153:3.929431493000000053,s154:3.929431493000000053):0.58952085890000005541,(s155:4.4774633660000002777,(s156:2.7123332000000002218,s157:2.7123332000000002218):1.765130166000000056):0.041488986419999998589):12.343701169999999223):11.437733610000000439,s162:28.300387140000001551):1.515375848999999997):2.6277221590000001683,((s169:7.8409351410000001081,s170:7.8409351410000001081):7.5946375750000001403,(s172:13.329860059999999677,(s173:6.7214149780000003176,((s174:0.30807071029999999467,s175:0.30807071029999999467):4.1074336630000001236,s177:4.4155043730000000934):2.3059106030000000587):6.6084450869999997735):2.1057126570000002097):17.007912430000001081):32.366753600000002677):12.292550920000000048); +((((((s283:0.49950781950000000542,s284:0.49950781950000000542):2.3766585789999998823,s285:2.8761663990000001512):13.275750099999999776,s286:16.151916490000001403):14.555233230000000688,(s288:9.130600983000000781,(s289:5.3395037639999998191,s290:5.3395037639999998191):3.7910972179999999909):21.576548739999999782):2.471388135000000208,((s292:0.10949029849999999953,s293:0.10949029849999999953):21.110084839999998962,s296:21.219575139999999891):11.958962720000000601):12.972100010000000125,s307:46.150637869999997065); +(s19:8.9192294969999998955,s21:8.9192294939999996473); diff --git a/example_files/pxmrcaname_example/mrca.txt b/example_files/pxmrcaname_example/mrca.txt new file mode 100644 index 0000000..0795ae8 --- /dev/null +++ b/example_files/pxmrcaname_example/mrca.txt @@ -0,0 +1,3 @@ +KIM = s28 s87 +THURSTON=s19 s21 +LEE =s292 s296 s307 diff --git a/example_files/pxmrcaname_example/mrca_test.tre b/example_files/pxmrcaname_example/mrca_test.tre new file mode 100644 index 0000000..d493d9b --- /dev/null +++ b/example_files/pxmrcaname_example/mrca_test.tre @@ -0,0 +1 @@ +(((((s19:8.919229497,s21:8.919229494):19.95224961,(((s28:1.946092244,(s29:1.087576191,(s30:0.892917128,s31:0.892917128):0.1946590628):0.8585160526):8.3971209,s32:10.34321315):11.09543257,((s33:7.226304805,((s34:2.670349682,s35:2.670349682):2.222933978,s36:4.89328366):2.333021145):7.192871235,((s38:0.6421928454,s39:0.6421928454):0.0263742241,s40:0.6685670695):13.75060897):7.019469682):7.432833389):9.421849134,(((s46:12.20104112,s49:12.20104112):6.604755154,(s51:5.415238384,s52:5.415238384):13.39055789):7.973707395,s56:26.77950367):11.51382458):38.80946142,(((((s87:3.690843889,s88:3.690843889):11.45073371,(((s90:4.720117293,(s91:3.997568422,s92:3.997568422):0.722548871):1.54594792,(s93:2.198184551,s94:2.198184551):4.067880663):0.4042469457,s95:6.670312157):8.47126544):12.39306906,((s98:5.074415446,s100:5.074415446):14.97270317,s104:20.04711862):7.487528037):20.7336537,s126:48.26830035):16.54193839,((((s133:19.19452408,(s135:5.458627874,(s136:0.5006869268,s137:0.5006869268):4.957940945):13.73589621):8.335064656,s140:27.52958874):2.286174247,((s151:16.86265353,((s153:3.929431493,s154:3.929431493):0.5895208589,(s155:4.477463366,(s156:2.7123332,s157:2.7123332):1.765130166):0.04148898642):12.34370117):11.43773361,s162:28.30038714):1.515375849):2.627722159,((s169:7.840935141,s170:7.840935141):7.594637575,(s172:13.32986006,(s173:6.721414978,((s174:0.3080707103,s175:0.3080707103):4.107433663,s177:4.415504373):2.305910603):6.608445087):2.105712657):17.00791243):32.3667536):12.29255092):22.89721033,((((((((s213:0.2029741842,s214:0.2029741842):12.71610281,((s216:5.616429623,(s218:3.713394097,s219:3.713394097):1.903035527):3.114968709,(s221:4.941089359,s222:4.941089361):3.790308973):4.187678662):2.781171964,s224:15.70024896):8.113641143,(s228:16.40398772,s229:16.40398772):7.409902377):20.19393189,(((s235:1.164761961,s237:1.164761961):30.92897799,(((s239:11.80920341,(s240:1.145193454,s241:1.145193454):10.66400996):6.476060724,(s243:5.366328664,s244:5.366328664):12.91893548):0.5879546054,((s246:1.021385454,s247:1.021385454):2.278992972,s248:3.300378425):15.57284032):13.22052121):1.942298314,((((s252:0.8909838051,s253:0.8909838051):1.446077873,(s254:0.5364767172,s255:0.5364767172):1.800584961):0.5351456596,s256:2.872207338):1.872321111,s257:4.744528449):29.29150981):9.971783723):17.83929796,(s266:27.92939399,(s268:4.234731747,s269:4.234731747):23.69466224):33.91772596):17.52852757,(((((((s283:0.4995078195,s284:0.4995078195):2.376658579,s285:2.876166399):13.2757501,s286:16.15191649):14.55523323,(s288:9.130600983,(s289:5.339503764,s290:5.339503764):3.791097218):21.57654874):2.471388135,((s292:0.1094902985,s293:0.1094902985):21.11008484,s296:21.21957514):11.95896272):12.97210001,s307:46.15063787):9.351516506,(s325:1.575825061,s326:1.575825061):53.92632932):23.87349314):10.77139891,(((s340:9.940550523,s341:9.940550523):21.02957737,((s345:9.069122675,s347:9.069122677):1.968266562,(s348:7.197873819,s350:7.197873819):3.839515418):19.93273866):45.33019168,(s381:4.52614792,s382:4.52614792):71.77417166):13.84672685):9.852953562); diff --git a/example_files/pxmrcaname_example/named_mrca.txt b/example_files/pxmrcaname_example/named_mrca.txt new file mode 100644 index 0000000..0502871 --- /dev/null +++ b/example_files/pxmrcaname_example/named_mrca.txt @@ -0,0 +1 @@ +(((((s19:8.9192294969999998955,s21:8.9192294939999996473)THURSTON:19.95224960999999908,(((s28:1.9460922439999999156,(s29:1.0875761909999999144,(s30:0.89291712800000000438,s31:0.89291712800000000438):0.1946590628000000045):0.85851605259999996811):8.3971209000000008871,s32:10.343213150000000411):11.095432569999999828,((s33:7.2263048049999998312,((s34:2.6703496819999998912,s35:2.6703496819999998912):2.2229339779999999216,s36:4.8932836599999998128):2.3330211450000000184):7.1928712350000001408,((s38:0.64219284539999998973,s39:0.64219284539999998973):0.026374224099999999532,s40:0.66856706949999999967):13.750608970000000042):7.0194696820000004323):7.4328333889999997908):9.4218491340000003476,(((s46:12.201041119999999296,s49:12.201041119999999296):6.604755154000000239,(s51:5.415238384000000238,s52:5.415238384000000238):13.390557890000000185):7.9737073949999999201,s56:26.779503670000000426):11.513824579999999642):38.8094614199999981,(((((s87:3.6908438889999999333,s88:3.6908438889999999333):11.450733709999999732,(((s90:4.7201172930000003802,(s91:3.9975684220000000657,s92:3.9975684220000000657):0.72254887099999998146):1.5459479199999999199,(s93:2.1981845510000002086,s94:2.1981845510000002086):4.0678806630000003963):0.40424694570000002658,s95:6.6703121569999996865):8.4712654399999998134):12.393069060000000192,((s98:5.0744154459999997187,s100:5.0744154459999997187):14.972703170000000839,s104:20.047118619999999112):7.4875280369999996921):20.733653700000001407,s126:48.268300349999996968):16.541938389999998549,((((s133:19.194524080000000765,(s135:5.4586278740000002685,(s136:0.5006869268000000428,s137:0.5006869268000000428):4.9579409449999998216):13.73589620999999994):8.3350646560000001273,s140:27.529588740000001224):2.2861742469999999372,((s151:16.862653529999999336,((s153:3.929431493000000053,s154:3.929431493000000053):0.58952085890000005541,(s155:4.4774633660000002777,(s156:2.7123332000000002218,s157:2.7123332000000002218):1.765130166000000056):0.041488986419999998589):12.343701169999999223):11.437733610000000439,s162:28.300387140000001551):1.515375848999999997):2.6277221590000001683,((s169:7.8409351410000001081,s170:7.8409351410000001081):7.5946375750000001403,(s172:13.329860059999999677,(s173:6.7214149780000003176,((s174:0.30807071029999999467,s175:0.30807071029999999467):4.1074336630000001236,s177:4.4155043730000000934):2.3059106030000000587):6.6084450869999997735):2.1057126570000002097):17.007912430000001081):32.366753600000002677):12.292550920000000048)KIM:22.897210330000000056,((((((((s213:0.20297418419999999073,s214:0.20297418419999999073):12.716102810000000645,((s216:5.6164296230000001486,(s218:3.7133940970000001158,s219:3.7133940970000001158):1.9030355269999998935):3.1149687089999997802,(s221:4.9410893590000002362,s222:4.9410893610000004017):3.7903089730000001367):4.1876786619999997185):2.7811719639999998854,s224:15.700248959999999698):8.1136411430000006106,(s228:16.403987719999999939,s229:16.403987719999999939):7.4099023769999998734):20.193931890000001772,(((s235:1.1647619609999999568,s237:1.1647619609999999568):30.92897798999999992,(((s239:11.809203410000000289,(s240:1.1451934539999999441,s241:1.1451934539999999441):10.664009959999999566):6.4760607239999998797,(s243:5.3663286640000000816,s244:5.3663286640000000816):12.918935480000000027):0.58795460539999999661,((s246:1.0213854540000000259,s247:1.0213854540000000259):2.2789929720000001723,s248:3.3003784249999998934):15.572840319999999181):13.220521209999999357):1.9422983140000000812,((((s252:0.89098380509999997034,s253:0.89098380509999997034):1.4460778729999999026,(s254:0.53647671720000000839,s255:0.53647671720000000839):1.8005849609999999839):0.53514565960000004541,s256:2.8722073379999999432):1.8723211109999999824,s257:4.7445284489999997035):29.291509810000000869):9.9717837229999997106):17.839297959999999676,(s266:27.929393990000001224,(s268:4.2347317469999996575,s269:4.2347317469999996575):23.694662239999999542):33.917725959999998508):17.52852757000000139,(((((((s283:0.49950781950000000542,s284:0.49950781950000000542):2.3766585789999998823,s285:2.8761663990000001512):13.275750099999999776,s286:16.151916490000001403):14.555233230000000688,(s288:9.130600983000000781,(s289:5.3395037639999998191,s290:5.3395037639999998191):3.7910972179999999909):21.576548739999999782):2.471388135000000208,((s292:0.10949029849999999953,s293:0.10949029849999999953):21.110084839999998962,s296:21.219575139999999891):11.958962720000000601):12.972100010000000125,s307:46.150637869999997065)LEE:9.3515165059999993957,(s325:1.5758250609999999714,s326:1.5758250609999999714):53.926329320000000678):23.873493140000000778):10.771398910000000271,(((s340:9.9405505230000006378,s341:9.9405505230000006378):21.029577369999998382,((s345:9.0691226749999991341,s347:9.0691226769999992996):1.9682665619999999418,(s348:7.1978738189999997843,s350:7.1978738189999997843):3.8395154179999999577):19.932738659999998276):45.330191679999998655,(s381:4.5261479199999996581,s382:4.5261479199999996581):71.774171659999993267):13.846726849999999587):9.8529535619999997209); diff --git a/example_files/pxnj_example/Alignment.aln b/example_files/pxnj_example/Alignment.aln new file mode 100644 index 0000000..d80f3c6 --- /dev/null +++ b/example_files/pxnj_example/Alignment.aln @@ -0,0 +1,38 @@ +>Drosophila_setosifrons +TTAATAATATTCTTATATAAAATATAATTATTTTTATATTTGGTCCTTTCGTACTAAAATATAACAATTTTTTAAAGATAGAAACCAACCTGGCTTACACCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACAGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTACAAATGGATCAATTATTCATAAATTAATGGTTTTTTAAATTAAAAGTTTATTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAACTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAACTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTTATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTAAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCATGTCCATTGCGGTAAGTAAATATATAAATATATAAATACTTTATCAGGTGGCAGCCTATTTAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAATGTCGAACCACGCGTTGCCGAGCTTCTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGCCTTCAARATAGAGCTTCTCCCTTAATAGAACAACTAATTTTTTTTCATGATCACGCTTTATTAATTTTAGTAATAATCACTGTATTAGTTGGCTACTTAATATTTATATTATTTTTCAATAAATATATTAACCGATTTCTTCTTCATGGACAATTAATTGAAATAATTTGAACAATTCTACCTGCAATTATCTTATTATTTATTGCCCTTCCTTCTTTGCGTCTTCTTTATCTTCTTGATGAAATTAATGAACCTTCAGTAACTTTAAAAAGAATTGGACATCAATGATATTGAAGTTATGAATATTCAGATTTTAATAACATTGAATTTGACTCATACATAATCCCCACAAATGAATTAACAAATGATGGATTCCGTCTTTTAGACGTTGATAATCGAATTATTTTACCCATAAACTCTCAAATCCGAATTCTAGTAACAGCCGCTGATGTAATTCATTYTTGAACTATTCCCGCTTTAGGGGTAAAAGTTGATGGAANTCCTGGCCGATTAAACCAAANTAATTTTTTTATCAACCGACCAGGTTTATTTTACGGACAATGTTCAGAAATTTGTGGAGSTAACCACAGTTTTATACCTATTGTAATTGAAAGAGTCCCTGTTAACTATTTTATTAAATGAATTTYTAAAAGRGTAAATTYTT--CCCGCCCTGGTTGAGGCTAGCCAAGAATGCTGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGTAAGATCAAGCCCAACGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGAGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCAATCTTGATTAAACATATAMTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCTAATCTGGCCAATGAAGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAAAAAGCCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCACTTCCGTGTTGTCGTTGTGGACGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGACTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTACCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTAAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAATCTTTCACACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCGGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAAGGCCCACCCACGGCAGAGGAAGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGACTAAACATTTCAGTCCTAATTAATTTTCAATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAAAGATTTAATCGA +>Drosophila_adunca +TTAATAATATTCTTATTAAAAATATAATTATTTAAATATTTGGTCCTTTCGTACTAAAATATTTTAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATAATTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTGTATAATTAAAATAAACAAAATATAAAGATTNATAGGGTCTTCTCGTCTAGTAAATGTATTTTAGCTTGTGGACTACAAAATAAAATTGTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTCACAGGTACTGTGAACACCACTACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGTCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTACCCGTTTACTCTGCATCAAAGGCGGCTGCCCTAAGCTTCACCAGTTCCCTCTCGGTAAGTAAATATATAAATRTAT--ATACTTCAGAAGGTGACAATCTATTGATTCTTAACAGAGATTGGCCCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCAAAACCACTCTGGTGCACAAATTTAACTCTTGGCTGAATGTTGAGCCACGGGTTGCGGAGCTACTCCTTGAGTTTCCCACACAGACAACGGAGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGTCTTCAAGATAGAGCTTCACCTTTAATAGAACAACTAATTTTTTTTCACGATCATGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTAGGGTATTTAATATTTATATTATTTTTTAATACATATATTAACCGATTTTTACTCCACGGACAATTAATTGAAATAATTTGAACTATTTTACCTGCAATTATTTTATTATTTATTGCTCTTCCTTCTTTACGTCTTTTATACCTTTTAGATGAAATTAACGAACCTTCAGTAACTTTAAAAAGAATTGGACACCAATGATATTGAAGTTATGAATATTCAGATTTTAATAATGGTGAATTTGATTCTTATATAATTCCTACTAATGAACTTGCCAATGATGGATTTCGATTATTAGACGTTGATAACCGAATTGTCTTACCAATAAATTCACAAATTCGAATTTTAGTTACAGCCGCAGATGTAATTCATTCATGAACAATTCCTGCTTTAGGAGTAAAAGTAGATGGAACTCCTGGTCGATTAAATCAAACTAATTTTTTTATCAACCGGCCAGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGTGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTACCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTT-------------TGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTTATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAACGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCACCTGAAGGTAAGCCTATACGCAAACATGACTCTTGGCACTCTTGATTAATCCTATACTATCTACAATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCGAATGAGGTGGCTGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTAGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTTGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCGGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGCTTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGTGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ATACATTTTCAATTC----ATTTAAAACCTTTCACACAGGCGGTCGCAATCGTCGTGTCTCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCATGCCCAATTAATTTATTATATTAACCTAATGCC---TTTCTTTCAGATTCCCCCTGTTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCT-------------- +>Drosophila_oahuensis +TTAATGAAATTCTTGCTAAAAATATGATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTGTTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAACTTATTATAACAAAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATGGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACGCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATGTTAACAGAAATTGGCGCATATTACTGGTGTTACGGCATATTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATTCCACACAGACATCATTGCAGTGCGCACATAACTTTGTGAAAGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGCCTTCAAGATAGAGCTTCACCTTTAATAGAACAACTTATTTTTTTCCATGATCACGCTTTATTAATTTTAGTAATAATTACAGTCTTAGTCGGATACTTAATATTTATACTATTTTTTAATAGTTATATTAACCGATTTCTACTCCATGGTCAATTAATTGAAATAATTTGAACAATTTTACCTGCAATTATTTTATTATTTATTGCTCTCCCCTCTTTACGACTTCTCTACCTTTTAGATGAAATTAATGAACCTTCCGTAACTTTAAAAAGAATCGGTCACCAATGATATTGAAGTTATGAATATTCAGATTTTAATAACGTTGAATTTGATTCTTACATAATCCCTACAAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTTGACAACCGAATTATTTTACCTATAAACTCACAAATTCGAATTTTAGTYACAGCCGCGGATGTAATTCATTYTTGAACAATTCCCGCTTTAGGAGTAAAAGTTGACGGAACCCCGGGTYGTTTAAACCAAAMTAATTTTTTTATYAACCGACCAGGSTTATTTTATGGACAATGTTCAGAAATTTGCGGAGCTAACCATAGCTTTATACCTATTGTAATTGAAAGTGTACCTGTAAATTATTTTATTAAATGAATTTTTAGTAGAGTAAATTTTT----------GGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTAGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGAGGCATTGATCTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCGCAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCAAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGCGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATC------------------------- +>Drosophila_picticornis +TTAATAATATTCTTATTTAAAATATAATTATTTTAACATTTGGTCCTTTCGTACTAAAATGTTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCGTTATTAACGGATCAATTATTCATAAATCAATGATTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAACAGAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTACAATAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTCCTCATCAATGGCGCTGGTATCCTGGATGATCATCAGATTGAGCGCACCATTGCGGTGAACTTTGCAGGTACAGTGAACACCACAACAGCGATCTTGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCCGTAACTGGCTTTAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCATGTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAAGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATACTCCATCAATCCGGGCATTACCAAAACTATTCTGGTGCATAAATTCAACTCCTGGCTAAATGTTGAGCCACGCGTTGCCGAGCTTCTCCTTGAGCATCCCACACAGACAACACTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTCAAGATAGAGCTTCACCTTTAATAGAACAATTAATTTTTTTTCATGATCATGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTCGGATACTTAATATTTATATTATTTTTTAATAACTATATTAATCGGTTTCTTCTTCATGGGCAATTAATTGAAATAATTTGAACAATCTTGCCCGCAATTATTTTGTTATTTATCGCTCTCCCTTCCTTACGTCTTCTTTATCTTTTAGATGAAATTAACGAACCTTCAGTAACTCTAAAAAGAATTGGACATCAATGATATTGAAGTTATGAATATTCTGATTTTAACGATATTGAATTTGATTCTTATATAATTCCTACGAATGAATTAACAAATGACGGATTTCGTCTTTTAGATGTTGATAACCGAATTATTTTACCGATAAATTCTCAAATTCGAATTTTAGTGACAGCAGCAGATGTAATCCATTCTTGAACAATCCCCGCTTTAGGGGTAAAAGTAGATGGAACCCCTGGTCGACTAAATCAAACCAATTTTTTTATAAACCGACCTGGTTTATTYTACGGCCAATGTTCAGAAATCTGTGGAGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATCAAATGAATTTYTAACCAAGTAAATTYTT-------------------------------------------TTTTTGTGGTGCCGCATCAGTTTATCCCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAACGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATTTGAAGGTGAGTCTACACGCAAAGGTGACTCTTGGCAATCTTGATTAAACCTTTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCAAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAAAAAGCCAAGGTGCTGCGTGATCTCTTCCAGGCCAATCACTTCCGTGTTGTCGTTGTGGAAGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGTGACAATACCAAAGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCGACGTTCTTTGAGAGCTGCGGCGTCGCTGATCTTATCACGACGTGCTATGGTTCGTGTCCAACACTACATTTGAAATTTAATTATTAATTATATTTTAAAATCTTTTAATTC----ATATGAAATCTTTCACACAGGTGGTCGCAATCGTCGCGTATCTGAGGCTTTTGTCACATCTGGCAAAACCATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAAGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTAATTTATTTATTATAATAATCAAATATTAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCT-------------- +>Drosophila_primaeva +TTAATAATATTCTTACCAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTACTAATGGATCAATTACTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAACAAAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTACAAAAATTTTAAATGAAACAAGTTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATACTCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACTACTGCGATCTACGACTTCTGGGACAAGCGTAAGGGCGGACCAGGTGGTGTTATTGCCAACGTCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTNTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCTCTTCCCTTGCCGTAAGTAAACATATATTTATAT--AGACTTCCTCAGGTGGCAACCTATTGAATCTTAACAGAGATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCAGGCATTACCAAAACCGCTCTGGTGCATAAATGCAACTCTTGGCTGAATGATGAGCCAGGCGTTGACGAGCTTCTACTTGAGCATTCCACACAGACAACGGTCCAGTGCGCTCAGAACTTTGTCAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTCCAAGATAGCGCCTCACCCTTAATAGAACAACTTATTTTTTTCCATGACCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTTGGATATTTAATATTTATATTATTTTTTAATAACTATATTAATCGATTTTTATTGCACGGGCAACTAATTGAAATAATTTGAACAATTTTACCAGCAATTATTTTATTATTTATTGCTCTACCCTCTTTACGCCTTTTATACCTTTTAGATGAAATTAACGAACCCTCAGTTACTTTAAAAAGAATTGGACATCAATGATATTGAAGCTACGAATATTCAGATTTTAATAACGTAGAATTTGATTCGTATATAATCCCTACCAATGAATTAGCAAACGACGGATTTCGACTATTAGATGTTGATAACCGAATCATTTTACCTATAAATTCTCAAATCCGAATTTTAGTAACAGCAGCTGATGTAATTCACTCATGAACAATCCCAGCTTTAGGGGTAAAAGTTGATGGAACCCCTGGACGATTAAACCAAACCAATTTTTTTATTAACCGACCTGGGTTATTTTATGGACAATGCTCAGAAATTTGTGGGGCAAATCATAGCTTCATACCTATTGTAATTGAAAGTGTTCCCGTGAATTATTTTATTAAATGAATTTCTTCGAGAGTAAATTCTT--CCGACCCTGGTTGAGGCTAGCCAAGAATGCTGATATACTCATTTTTGTGGTGCCCCATCAGTTTATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAATGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCCATACGCAAAGGTGACTCTGGGCAATCTTAATTAATCCTATAATATCAACTATCAGATACCATGCGCTGGGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACTACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTTGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGTGGTGCCTTGAAGAACATCGTCGCCTGTGGTGCGGGCTTCGTTGATGGTCTCAAACTGGGCGACAATACCAAGGCGGCGGTCATCCGTCTCGGCCTTATGGAAATGATTCGCTTCGTCGATGTCTTCTATCCAGGCAGTAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTAAATTTCAATTAT--ATTAAA----ACACTTTTTCAATTCATGAATATGAAACCTTTCACACAGGCGGTCGCAATCGTCGTGTCTCTGAGGCCTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGACAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTTAGGCATCATTTATTTATTATATTAATTAAATATCAACTTTCTTTCAGATTCCCCCTGTTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTTAATCG- +>Drosophila_nigribasis +TTAATAATATTCTTATTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACATTAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATTTATGGTTTTAAAAATTAAAAGTTTTTAAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTAACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCCTGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGCTGGCAACCAATTGAATCTTATCAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTCTGGTGCACAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTCCAAGATAGAGCTTCACCCTTAATAGAACAACTTATTTTTTTCCACGATCACGCCTTATTAATTTTAGTAATAATTACTGTTTTAGTTGGATATTTAATATTTATATTATTTTTTAATAGATATATTAACCGATTTCTACTTCATGGTCAATTAATTGAAATAATTTGAACAATCTTACCTGCAATTATTTTATTATTTATTGCTCTTCCCTCTTTACGACTTCTTTACCTTTTAGATGAAATTAATGAGCCTTCAGTAACTTTAAAAAGAATCGGGCACCAATGATATTGAAGCTACGAATATTCAGATTTTAATAATATTGAATTTGATTCATATATAATCCCTACTAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTAACAGCTGCAGATGTAATTCATTCTTGAACAATCCCTGCTTTAGGGGTAAAAGTTGATGGAACTCCTGGTCGTTTAAACCAAACTAATTTTTTTATTAACCGACCTGGTTTATTTTATGGGCAATGTTCAGAAATTTGTGGAGCTAATCATAGTTTTATACCTATTGTAATTGAGAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTT--CCCGCCCGGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTAGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACCATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGCGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATATCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGCCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTTAATCGA +>Drosophila_obscuripes +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCANAAATCAATGGTGGTAAAAATTAAAAGTTTTTTNAATTTTAATATCNCCCCAATAAAATWTTTTAWTTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTGTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGATAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAAGTGGCAACTAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTYAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCATGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTGGGATACTTAATATTTATACTATTTTTTAACAGTTATATTAACCGATTTCTACTACATGGACAACTAATTGAAATAATTTGAACAATCCTACCCGCAATTATTTTATTATTTATTGCTCTCCCTTCTTTACGGCTTCTTTACCTTTTAGATGAAATTAATGAACCTTCGGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAAGTTATGAATATTCAGATTTTAATAATGTTGAATTTGATTCATATATAATCCCTACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCAGATGTAATTCATTCTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACTCCTGGTCGATTAAACCAAACTAATTTTTTTATTAACCGACCGGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGCGCTAACCATAGTTTTATACCTATCGTAATCGAAAGCGTTCCTGTTAAATATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT-TCCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCTCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGTGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGCTTAAACCTGTAMTATATACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGTCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCC--------------- +>Drosophila_silvestris +TTAATAATATTCTTATTTAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAGCGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTACTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATACTCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAATGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAACATATTTATACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACTGTATATTCCATCAATCCGGGCATTACCAAAACTGTTCTAGTGCATAAATTCAACTCCTGGCTGAATGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTGGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTTGGGTATTTAATATTTATATTATTTTTTAATAGTTATATTAACCGATTCCTACTCCACGGACAATTAATTGAAATAATTTGAACGATTTTACCCGCCATTATTTTATTATTTATTGCTCTCCCCTCCCTTCGTCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTAAAAAGAATTGGCCATCAATGATACTGAAGTTACGAATACTCAGATTTTAACAGAATCGAATTTGATTCATATATAATTCCTACAAATGAGTTAGCGAATGATGGATTCCGACTCCTAGATGTTGATAACCGAATTGTTTTGCCTATAAATTCTCAAATCCGAATTTTAGTAACCGCCGCAGATGTAATTCATTYTTGAACAATCCCTGYTYTTGGGGTAAAAGTTGATGGAABTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGGCCAGGCTTATTTTATGGACAATGTTCAGAAATTTGTGGGGCTAACCATAGTTTTATACCTATTGTAATCGAAAGTGTCCCTGTGAACWATTTTATTAAATGAATTTNTAACAGAGTAAATTYTT--CCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTAGGCAAGATCAAGCCCCGCGCGATTGCCATATCACTGATCAAGGGTTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGTTTAAACCCGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAAGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTACGGGCTTTGTCGATGGTCTCAAGTTGGGTGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTHGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTSAGANCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGGAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTAAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAWCTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAAAATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCC--------------- +>Drosophila_heteroneura +TTAATAATATTCTTATTTAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAGCGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTACTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATACTCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTGGTTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAATGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTGGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTTGGATATTTAATATTTATATTATTTTTTAATAGTTATATTAACCGATTCCTACTCCACGGACAATTAATTGAAATAATTTGAACGATTTTACCCGCCATTATTTTATTATTTATTGCTCTCCCCTCCCTTCGTCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTAAAAAGAATTGGCCATCAATGATACTGAAGTTACGAATACTCAGATTTTAACAGAATCGAATTTGATTCATATATAATTCCTACAAATGAGTTAGCGAACGATGGGTTCCGACTCCTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTAACCGCCGCAGATGTAATTCATTYTTGAACAATCCCTGCTCTTGGGGTAAAAGTTGATGGAACTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGGCCGGGCTTATTTTATGGACAATGTTCAGAAATTTGTGGGGCTAACCATAGTTTTATACCTATTGTAATCGAAAGTGTCCCTGTGAACTATTTTATTAAATGAATTTCTAACAGAGTAAATTYTT----------------------CCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCGATTGCCATATCACTGATCAAGGGTTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGTTTAAACCCGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAAGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAGCTGGGAGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACAACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACTTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTCATTTATTTATAATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGGCATACACAAAATTTGCACAAATC------------------------- +>Drosophila_differens +TTAATAATATTCTTATTAAAAATATAATTATCTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTAATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACGAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTACACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTGGGCCTTYAAGATAGCGCCTCGCCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTCGGGTACTTAATGTTTATATTATTTTTTAATAATTATATTAATCGGTTCCTACTTCATGGGCAATTAATTGAAATAATTTGAACAATTTTGCCCGCCATTATTTTATTATTTATTGCTCTTCCTTCCCTTCGTCTTCTTTACCTCCTAGATGAAATTAACGAACCCTCAGTTACTTTAAAAAGAATTGGTCATCAATGATATTGAAGTTACGAATACTCAGATTTTAACAGAATTGAATTTGATTCATACATAATTCCTACAAATGAGTTAGCAAACGATGGATTCCGTCTTTTAGATGTTGATAACCGAATTGTTTTACCCAYAAATTCTCAAATCCGAATTTTAGTAACTGCCGCGGATGTAATCCATTCTTGAACAATCCCCGCTCTTGGAGTAAAAGTTGATGGAACTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGACCGGGCTTATTCTACGGACAATGTTCAGAAATTTGTGGCGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTT--------------------------------CGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCGATTGCCATATCACTGATCAAGGGYTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTACTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAGCTGGGAGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGTGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACTTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAAAATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTTAATCGA +>Drosophila_planitibia +TTAATAATATTCTTATTAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAGCGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTAATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTACACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGATGCCTACCAGAAATGTCAACATGAGCTAACCTGGGCCTTCAARATAGCGCCTCACCTTTAATARAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTCGGRTACTTAATGTTTATATTATTTTTTAAYAATTATATTAAYCGGTTCCTACTCCAYGGRCAATTAATTGAAATAATTTGAACAATTTTGCCCGCCATTATTTTATTATTTATTGCTCTCCCCTCTCTTCGTCTTCTTTACCTCCTAGATGAAATTAACGAACCYTCAGTTACTTTAAAAAGAATTGGYCATCAATGATATTGAAGTTACGAATACTCAGATTTTAACAGAATCGAATTTGATTCATACATAATCCCTACAAATGAGTTAGCGAAYGATGGNTTCCGACTTTTAGANGTTGATAACCGAATTGTTTTACCYATAAATTCTCAAATCCGAATTTTAGTAACTGCCGCNGATGTAATCCATTCTTGAACAATCCCCGCTYTTGGAGTAAAAGTTGATGGAACTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGACCGGGCTTATTTTACGGACAATGTTCAGAAATTTGTGGGGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTYTT-------------------------------TCGATATACTCATTTTTGTKGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCGATTGCCATATCACTGATCAAGGGTTTCGATAAGGCCGGGGGGGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGTTTAAACCCGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATACGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAGCTGGGAGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACTTTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCC--------------- +>Drosophila_hemipeza +TTAATAATATTCTTAATAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGCTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAATGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACAACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCGACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCCCTATTAATTTTAGTTATAATTACCGTTTTAGTCGGATATTTAATATTTATATTATTTTTTAATAACTACATTAATCGATTTTTACTCCACGGACAATTAATTGAAATAATTTGAACAATTTTACCCGCCATTATTTTATTATYTATTGCTCTCCCTTCTTTACGTCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTAAAAAGAATTGGTCATCAATGATATTGAAGTTATGAATACTCAGATTTTAATAGAATTGAATTTGACTCTTATATAATCCCTACAAACGAGCTAACGAACGACGGATTTCGGCTATTAGATGTCGATAACCGAATTGTTTTACCTATAAATTCTCAAATTCGGATTTTAGTGACTGCCGCAGATGTAATCCATTCATGAACAATTCCGGCCCTTGGGGTAAAAGTTGATGGAACCCCTGGTCGATTAAATCAAACTAATTTTTTTATTAACCGACCAGGTTTATTTTACGGACAATGTTCAGAAATCTGCGGAGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTTAATTATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT----------------GGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCCAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACACGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGCTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGTGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGCATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCAGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACTTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAAGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTAATTTTTTTATAATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAA------------ +>Drosophila_ingens +TTAATAATATTCTTATTAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCRGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATTCCACACAGACATCATCGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATCTTAGTTATAATTACAGTTTTAGTGGGGTACTTAATATTTATACTATTTTTTAACTCTTATATTAACCGATTTTTACTACACGGACAATTAATTGAAATAATTTGAACAATCTTACCTGCAATTATTTTGTTATTCATTGCTCTACCTTCTTTACGACTTCTCTACCTTTTAGATGAAATCAATGAACCTTCAGTAACTTTAAAGAGAATTGGCCACCAATGATACTGAAGCTATGAATACTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTTGATAATCGAATCGTTTTACCCATAAATTCACAAATCCGAATTTTAGTGACAGCCGCAGATGTAATTCATTTTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAAMTCCTGGTCGTTTAAACCAAACTAATTTTTTTATTWACCGACCAGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGGGSTAATYATAGCTTTATACCTATTGTAATTGAAAGAGTCCCTGTTAATTATTTTATTAAATGAATTTYTAATAGAGTAAATTYTTTTCCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCTCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACACTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCAGTCATTCGTCTCGGACTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGANAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTNGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCCCAYTTATTTATTATATTAACCAAATATCGCCCTTCTTTCAGATTCCCCCTATTT----------------------------------------------------- +>Drosophila_neopicta +TTAATAATATTCTTATTAAAAATATAATTATTTTCATATTTGGTCCTTTCGTACTAAAATATAATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAACCAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTTATCAGCTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGAGCTTCTCCCCTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATTTTAGTAATAATTACTGTTTTAGTTGGATATTTAATATTTATGCTATTTTTTAATAGTTACATTAACCGATTTCTACTTCACGGACAATTAATTGAAATAATTTGAACGATCTTACCTGCAATTATTTTATTATTTATTGCTCTCCCTTCTTTACGACTTCTATACCTTTTAGATGAAATTAATGAGCCCTCAGTAACTTTAAAAAGAATTGGTCATCAATGATATTGAAGTTATGAGTATTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAGCAAACGATGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTGACCGCCGCAGATGTAATTCATTCTTGAACAATCCCTGCTCTAGGGGTAAAAGTTGATGGAACTCCTGGTCGCTTAAACCAAACTAATTTTTTTATTAACCGACCTGGTTTATTCTACGGACAATGTTCAGAAATTTGTGGAGCTAATCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT-TCCCCGCCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTTGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAGCCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATGTGATACCTTTCAAACAGGCGGTCGYAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATGTCAGGCCTAATTTATTTATTATATTAACCAAATATCAAAATTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGGGCAA---------------------------- +>Drosophila_substenoptera +TTAATAATATTCTTATTAAAAATACAATTATTTTCATATTTGGTCCTTTCGTACTAAAATATAATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTACAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGCAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGCTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTTTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACGCAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTCCAGGATAGAGCTTCACCCCTAATAGAACAACTTATTTTTTTCCACGATCACGCCCTATTAATTTTAGTAATAATTACTGTTTTAGTCGGATATTTAATATTTATATTATTTTTTAACAGGTATATTAACCGATTTCTTCTTCATGGCCAATTAATTGAAATAATTTGAACAATTTTGCCGGCAATTATTTTATTATTTATTGCTCTCCCCTCCCTACGACTTCTTTACCTTTTAGACGAAATTAATGAACCTTCAGTAACTTTAAAAAGAATTGGTCATCAATGATACTGAAGCTACGAATACTCAGATTTTAATAATGTTGAATTTGATTCTTATATAATTCCCACCAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTCGATAACCGAATCGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTGACAGCCGCAGATGTAATTCATTCTTGAACAATCCCCGCTTTAGGGGTAAAAGTTGACGGAACTCCAGGTCGTTTAAACCAAACTAATTTTTTTATCAACCGACCTGGCCTATTTTATGGACAATGTTCAGAAATTTGCGGAGCTAACCATAGTTTTATACCTATCGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTT--CCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTAATTTTTGTGGTGCCGCATCAGTTRAKACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAKCCCAGCGCCATTGCCATATCACTGATCAAGGGKTTCGATAAGGCCGAGGGTGCCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGATATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGGTTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAA------------ +>Drosophila_neoperkinsi +TTAATAAGATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGCTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCAATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCATGATCACGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTGGGGTACTTAATATTTATATTATTTTTTAACAATTATATTAACCGATTTCTACTACATGGACAATTAATTGAAATAATTTGAACGATTCTTCCCGCAATTATCTTATTATTTATTGCTCTCCCTTCTTTACGGCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTGAAAAGAATTGGTCACCAGTGATATTGAAGTTATGAATACTCAGATTTTAATAACGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAATAAATGACGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCGGATGTAATTCATTCCTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACCCCTGGCCGTTTAAACCAAACTAATTTTTTTATTAACCGGCCAGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGTGCTAACCATAGCTTTATACCTATTGTAATTGAAAGTGTCCCTGTTAATTATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT---------TGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCTCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACWCTTTGTTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTT------ +>Drosophila_melanocephala +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTATTAATGGATCAATTATTCATAAATCAATGGTTTTTAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTCAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTAGGATACTTAATATTTATACTATTTTTTAACAGTTATATTAACCGATTTCTACTACATGGACAACTAATTGAAATAATTTGAACAATTCTACCCGCAATTATTTTATTATTTATTGCTCTACCTTCTTTACGGCTTCTTTACCTTTTAGACGAAATTAATGAACCTTCGGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAAGTTATGAATATTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCCACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAACCGAATTATTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCAGATGTAATTCATTYTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACTCCTGGTCGATTAAACCAAACTAATTTTTTTATTAACCGACCAGGCTTATTTTATGGACAATGTTCAGAAATTTGTGGAGCTAATCATAGCTTTATACCTATTGTAATCGAAAGTGTTCCTGTTAAWTATWTTATTAAATGAATTTNTAATAGAGTAAATTCTT-------------------------------------------------TGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTRTTGGGCAAGATCAAGCCCAGTGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGACTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACTATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCATGGGCTAAACATTTCAGGCCTAACTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGC---------------------- +>Drosophila_hanaulae +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATYTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGCTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGGTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCTCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTGATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGARTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATCGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGAGCTTCACCTTTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATCTTAGTTATAATTACAGTTTTAGTGGGATACTTAATATTTATATTATTTTTTAACTCTTATATTAACCGATTTTTACTACACGGACAATTAATTGAAATAATTTGAACAATCTTACCTGCAATTATTTTGTTATTTATTGCTCTCCCTTCTTTACGACTTCTTTACCTTTTAGATGAAATCAATGAACCTTCAGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAAGCTATGAATACTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAATCGAATCGTTTTACCTATAAATTCACAAATCCGAATTTTAGTGACAGCCGCGGATGTAATTCATTCTTGAACAATCCCTGCCCTAGGGGTAAAAGTTGATGGAACTCCTGGTCGTTTAAACCAAACTAATTTTTTTATTAACCGACCAGGTTTATTTTACGGACAATGCTCGGAAATTTGTGGTGCTAACCATAGCTTTATACCTATTGTAATTGAAAGTGTCCCTGTTAAATATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT------CCCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGTGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAAYACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGAAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAA------------ +>Drosophila_cyrtoloma +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATCGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTCAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCATGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTGGGATACTTAATATTTATACTATTTTTTAACAGTTATATTAACCGATTTCTACTACATGGACAACTAATTGAAATAATTTGAACAATCCTGCCCGCAATTATTTTATTATTTATTGCTCTCCCTTCTTTACGGCTTCTTTMCCTTTTAAATGAAATTAATGAACCTTCGGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAATTTATGAATATTCAGATTTTAATAANGTTGAATTTGATYCATATATAATCCCTACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCAGAWGTAATTCATTTTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACTCCTGGTYGATTAAACCAAAMTAATTTTTTTATTAACCGACCVGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGVGCTAACCATAGTTTTATACCTATYGTAATCGAAAGCGTTCCTGKTAAWTATWTTATTAAATGAATTTNTAATAGAGTAAATTCTT--CCCGCCCTGGTTGAGGCTAGCCAAGAATGCCGATATACTHATTTTTGTGGTGCCNCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGYGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCATGGGCTAAACATTTCAGGCCTAACTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCT--------------------------------------------------------- diff --git a/example_files/pxnw_examples/Alignment.aln b/example_files/pxnw_examples/Alignment.aln new file mode 100644 index 0000000..d80f3c6 --- /dev/null +++ b/example_files/pxnw_examples/Alignment.aln @@ -0,0 +1,38 @@ +>Drosophila_setosifrons +TTAATAATATTCTTATATAAAATATAATTATTTTTATATTTGGTCCTTTCGTACTAAAATATAACAATTTTTTAAAGATAGAAACCAACCTGGCTTACACCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACAGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTACAAATGGATCAATTATTCATAAATTAATGGTTTTTTAAATTAAAAGTTTATTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAACTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAACTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTTATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTAAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCATGTCCATTGCGGTAAGTAAATATATAAATATATAAATACTTTATCAGGTGGCAGCCTATTTAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAATGTCGAACCACGCGTTGCCGAGCTTCTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGCCTTCAARATAGAGCTTCTCCCTTAATAGAACAACTAATTTTTTTTCATGATCACGCTTTATTAATTTTAGTAATAATCACTGTATTAGTTGGCTACTTAATATTTATATTATTTTTCAATAAATATATTAACCGATTTCTTCTTCATGGACAATTAATTGAAATAATTTGAACAATTCTACCTGCAATTATCTTATTATTTATTGCCCTTCCTTCTTTGCGTCTTCTTTATCTTCTTGATGAAATTAATGAACCTTCAGTAACTTTAAAAAGAATTGGACATCAATGATATTGAAGTTATGAATATTCAGATTTTAATAACATTGAATTTGACTCATACATAATCCCCACAAATGAATTAACAAATGATGGATTCCGTCTTTTAGACGTTGATAATCGAATTATTTTACCCATAAACTCTCAAATCCGAATTCTAGTAACAGCCGCTGATGTAATTCATTYTTGAACTATTCCCGCTTTAGGGGTAAAAGTTGATGGAANTCCTGGCCGATTAAACCAAANTAATTTTTTTATCAACCGACCAGGTTTATTTTACGGACAATGTTCAGAAATTTGTGGAGSTAACCACAGTTTTATACCTATTGTAATTGAAAGAGTCCCTGTTAACTATTTTATTAAATGAATTTYTAAAAGRGTAAATTYTT--CCCGCCCTGGTTGAGGCTAGCCAAGAATGCTGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGTAAGATCAAGCCCAACGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGAGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCAATCTTGATTAAACATATAMTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCTAATCTGGCCAATGAAGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAAAAAGCCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCACTTCCGTGTTGTCGTTGTGGACGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGACTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTACCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTAAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAATCTTTCACACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCGGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAAGGCCCACCCACGGCAGAGGAAGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGACTAAACATTTCAGTCCTAATTAATTTTCAATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAAAGATTTAATCGA +>Drosophila_adunca +TTAATAATATTCTTATTAAAAATATAATTATTTAAATATTTGGTCCTTTCGTACTAAAATATTTTAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATAATTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTGTATAATTAAAATAAACAAAATATAAAGATTNATAGGGTCTTCTCGTCTAGTAAATGTATTTTAGCTTGTGGACTACAAAATAAAATTGTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTCACAGGTACTGTGAACACCACTACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGTCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTACCCGTTTACTCTGCATCAAAGGCGGCTGCCCTAAGCTTCACCAGTTCCCTCTCGGTAAGTAAATATATAAATRTAT--ATACTTCAGAAGGTGACAATCTATTGATTCTTAACAGAGATTGGCCCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCAAAACCACTCTGGTGCACAAATTTAACTCTTGGCTGAATGTTGAGCCACGGGTTGCGGAGCTACTCCTTGAGTTTCCCACACAGACAACGGAGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGTCTTCAAGATAGAGCTTCACCTTTAATAGAACAACTAATTTTTTTTCACGATCATGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTAGGGTATTTAATATTTATATTATTTTTTAATACATATATTAACCGATTTTTACTCCACGGACAATTAATTGAAATAATTTGAACTATTTTACCTGCAATTATTTTATTATTTATTGCTCTTCCTTCTTTACGTCTTTTATACCTTTTAGATGAAATTAACGAACCTTCAGTAACTTTAAAAAGAATTGGACACCAATGATATTGAAGTTATGAATATTCAGATTTTAATAATGGTGAATTTGATTCTTATATAATTCCTACTAATGAACTTGCCAATGATGGATTTCGATTATTAGACGTTGATAACCGAATTGTCTTACCAATAAATTCACAAATTCGAATTTTAGTTACAGCCGCAGATGTAATTCATTCATGAACAATTCCTGCTTTAGGAGTAAAAGTAGATGGAACTCCTGGTCGATTAAATCAAACTAATTTTTTTATCAACCGGCCAGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGTGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTACCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTT-------------TGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTTATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAACGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCACCTGAAGGTAAGCCTATACGCAAACATGACTCTTGGCACTCTTGATTAATCCTATACTATCTACAATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCGAATGAGGTGGCTGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTAGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTTGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCGGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGCTTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGTGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ATACATTTTCAATTC----ATTTAAAACCTTTCACACAGGCGGTCGCAATCGTCGTGTCTCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCATGCCCAATTAATTTATTATATTAACCTAATGCC---TTTCTTTCAGATTCCCCCTGTTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCT-------------- +>Drosophila_oahuensis +TTAATGAAATTCTTGCTAAAAATATGATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTGTTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAACTTATTATAACAAAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATGGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACGCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATGTTAACAGAAATTGGCGCATATTACTGGTGTTACGGCATATTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATTCCACACAGACATCATTGCAGTGCGCACATAACTTTGTGAAAGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGCCTTCAAGATAGAGCTTCACCTTTAATAGAACAACTTATTTTTTTCCATGATCACGCTTTATTAATTTTAGTAATAATTACAGTCTTAGTCGGATACTTAATATTTATACTATTTTTTAATAGTTATATTAACCGATTTCTACTCCATGGTCAATTAATTGAAATAATTTGAACAATTTTACCTGCAATTATTTTATTATTTATTGCTCTCCCCTCTTTACGACTTCTCTACCTTTTAGATGAAATTAATGAACCTTCCGTAACTTTAAAAAGAATCGGTCACCAATGATATTGAAGTTATGAATATTCAGATTTTAATAACGTTGAATTTGATTCTTACATAATCCCTACAAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTTGACAACCGAATTATTTTACCTATAAACTCACAAATTCGAATTTTAGTYACAGCCGCGGATGTAATTCATTYTTGAACAATTCCCGCTTTAGGAGTAAAAGTTGACGGAACCCCGGGTYGTTTAAACCAAAMTAATTTTTTTATYAACCGACCAGGSTTATTTTATGGACAATGTTCAGAAATTTGCGGAGCTAACCATAGCTTTATACCTATTGTAATTGAAAGTGTACCTGTAAATTATTTTATTAAATGAATTTTTAGTAGAGTAAATTTTT----------GGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTAGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGAGGCATTGATCTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCGCAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCAAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGCGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATC------------------------- +>Drosophila_picticornis +TTAATAATATTCTTATTTAAAATATAATTATTTTAACATTTGGTCCTTTCGTACTAAAATGTTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCGTTATTAACGGATCAATTATTCATAAATCAATGATTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAACAGAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTACAATAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTCCTCATCAATGGCGCTGGTATCCTGGATGATCATCAGATTGAGCGCACCATTGCGGTGAACTTTGCAGGTACAGTGAACACCACAACAGCGATCTTGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCCGTAACTGGCTTTAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCATGTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAAGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATACTCCATCAATCCGGGCATTACCAAAACTATTCTGGTGCATAAATTCAACTCCTGGCTAAATGTTGAGCCACGCGTTGCCGAGCTTCTCCTTGAGCATCCCACACAGACAACACTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTCAAGATAGAGCTTCACCTTTAATAGAACAATTAATTTTTTTTCATGATCATGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTCGGATACTTAATATTTATATTATTTTTTAATAACTATATTAATCGGTTTCTTCTTCATGGGCAATTAATTGAAATAATTTGAACAATCTTGCCCGCAATTATTTTGTTATTTATCGCTCTCCCTTCCTTACGTCTTCTTTATCTTTTAGATGAAATTAACGAACCTTCAGTAACTCTAAAAAGAATTGGACATCAATGATATTGAAGTTATGAATATTCTGATTTTAACGATATTGAATTTGATTCTTATATAATTCCTACGAATGAATTAACAAATGACGGATTTCGTCTTTTAGATGTTGATAACCGAATTATTTTACCGATAAATTCTCAAATTCGAATTTTAGTGACAGCAGCAGATGTAATCCATTCTTGAACAATCCCCGCTTTAGGGGTAAAAGTAGATGGAACCCCTGGTCGACTAAATCAAACCAATTTTTTTATAAACCGACCTGGTTTATTYTACGGCCAATGTTCAGAAATCTGTGGAGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATCAAATGAATTTYTAACCAAGTAAATTYTT-------------------------------------------TTTTTGTGGTGCCGCATCAGTTTATCCCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAACGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATTTGAAGGTGAGTCTACACGCAAAGGTGACTCTTGGCAATCTTGATTAAACCTTTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCAAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAAAAAGCCAAGGTGCTGCGTGATCTCTTCCAGGCCAATCACTTCCGTGTTGTCGTTGTGGAAGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGTGACAATACCAAAGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCGACGTTCTTTGAGAGCTGCGGCGTCGCTGATCTTATCACGACGTGCTATGGTTCGTGTCCAACACTACATTTGAAATTTAATTATTAATTATATTTTAAAATCTTTTAATTC----ATATGAAATCTTTCACACAGGTGGTCGCAATCGTCGCGTATCTGAGGCTTTTGTCACATCTGGCAAAACCATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAAGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTAATTTATTTATTATAATAATCAAATATTAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCT-------------- +>Drosophila_primaeva +TTAATAATATTCTTACCAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTACTAATGGATCAATTACTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAACAAAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTACAAAAATTTTAAATGAAACAAGTTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATACTCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACTACTGCGATCTACGACTTCTGGGACAAGCGTAAGGGCGGACCAGGTGGTGTTATTGCCAACGTCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTNTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCTCTTCCCTTGCCGTAAGTAAACATATATTTATAT--AGACTTCCTCAGGTGGCAACCTATTGAATCTTAACAGAGATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCAGGCATTACCAAAACCGCTCTGGTGCATAAATGCAACTCTTGGCTGAATGATGAGCCAGGCGTTGACGAGCTTCTACTTGAGCATTCCACACAGACAACGGTCCAGTGCGCTCAGAACTTTGTCAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTCCAAGATAGCGCCTCACCCTTAATAGAACAACTTATTTTTTTCCATGACCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTTGGATATTTAATATTTATATTATTTTTTAATAACTATATTAATCGATTTTTATTGCACGGGCAACTAATTGAAATAATTTGAACAATTTTACCAGCAATTATTTTATTATTTATTGCTCTACCCTCTTTACGCCTTTTATACCTTTTAGATGAAATTAACGAACCCTCAGTTACTTTAAAAAGAATTGGACATCAATGATATTGAAGCTACGAATATTCAGATTTTAATAACGTAGAATTTGATTCGTATATAATCCCTACCAATGAATTAGCAAACGACGGATTTCGACTATTAGATGTTGATAACCGAATCATTTTACCTATAAATTCTCAAATCCGAATTTTAGTAACAGCAGCTGATGTAATTCACTCATGAACAATCCCAGCTTTAGGGGTAAAAGTTGATGGAACCCCTGGACGATTAAACCAAACCAATTTTTTTATTAACCGACCTGGGTTATTTTATGGACAATGCTCAGAAATTTGTGGGGCAAATCATAGCTTCATACCTATTGTAATTGAAAGTGTTCCCGTGAATTATTTTATTAAATGAATTTCTTCGAGAGTAAATTCTT--CCGACCCTGGTTGAGGCTAGCCAAGAATGCTGATATACTCATTTTTGTGGTGCCCCATCAGTTTATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAATGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCCATACGCAAAGGTGACTCTGGGCAATCTTAATTAATCCTATAATATCAACTATCAGATACCATGCGCTGGGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACTACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTTGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGTGGTGCCTTGAAGAACATCGTCGCCTGTGGTGCGGGCTTCGTTGATGGTCTCAAACTGGGCGACAATACCAAGGCGGCGGTCATCCGTCTCGGCCTTATGGAAATGATTCGCTTCGTCGATGTCTTCTATCCAGGCAGTAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTAAATTTCAATTAT--ATTAAA----ACACTTTTTCAATTCATGAATATGAAACCTTTCACACAGGCGGTCGCAATCGTCGTGTCTCTGAGGCCTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGACAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTTAGGCATCATTTATTTATTATATTAATTAAATATCAACTTTCTTTCAGATTCCCCCTGTTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTTAATCG- +>Drosophila_nigribasis +TTAATAATATTCTTATTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACATTAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATTTATGGTTTTAAAAATTAAAAGTTTTTAAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTAACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCCTGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGCTGGCAACCAATTGAATCTTATCAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTCTGGTGCACAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTCCAAGATAGAGCTTCACCCTTAATAGAACAACTTATTTTTTTCCACGATCACGCCTTATTAATTTTAGTAATAATTACTGTTTTAGTTGGATATTTAATATTTATATTATTTTTTAATAGATATATTAACCGATTTCTACTTCATGGTCAATTAATTGAAATAATTTGAACAATCTTACCTGCAATTATTTTATTATTTATTGCTCTTCCCTCTTTACGACTTCTTTACCTTTTAGATGAAATTAATGAGCCTTCAGTAACTTTAAAAAGAATCGGGCACCAATGATATTGAAGCTACGAATATTCAGATTTTAATAATATTGAATTTGATTCATATATAATCCCTACTAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTAACAGCTGCAGATGTAATTCATTCTTGAACAATCCCTGCTTTAGGGGTAAAAGTTGATGGAACTCCTGGTCGTTTAAACCAAACTAATTTTTTTATTAACCGACCTGGTTTATTTTATGGGCAATGTTCAGAAATTTGTGGAGCTAATCATAGTTTTATACCTATTGTAATTGAGAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTT--CCCGCCCGGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTAGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACCATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGCGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATATCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGCCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTTAATCGA +>Drosophila_obscuripes +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCANAAATCAATGGTGGTAAAAATTAAAAGTTTTTTNAATTTTAATATCNCCCCAATAAAATWTTTTAWTTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTGTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGATAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAAGTGGCAACTAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTYAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCATGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTGGGATACTTAATATTTATACTATTTTTTAACAGTTATATTAACCGATTTCTACTACATGGACAACTAATTGAAATAATTTGAACAATCCTACCCGCAATTATTTTATTATTTATTGCTCTCCCTTCTTTACGGCTTCTTTACCTTTTAGATGAAATTAATGAACCTTCGGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAAGTTATGAATATTCAGATTTTAATAATGTTGAATTTGATTCATATATAATCCCTACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCAGATGTAATTCATTCTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACTCCTGGTCGATTAAACCAAACTAATTTTTTTATTAACCGACCGGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGCGCTAACCATAGTTTTATACCTATCGTAATCGAAAGCGTTCCTGTTAAATATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT-TCCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCTCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGTGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGCTTAAACCTGTAMTATATACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGTCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCC--------------- +>Drosophila_silvestris +TTAATAATATTCTTATTTAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAGCGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTACTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATACTCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAATGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAACATATTTATACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACTGTATATTCCATCAATCCGGGCATTACCAAAACTGTTCTAGTGCATAAATTCAACTCCTGGCTGAATGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTGGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTTGGGTATTTAATATTTATATTATTTTTTAATAGTTATATTAACCGATTCCTACTCCACGGACAATTAATTGAAATAATTTGAACGATTTTACCCGCCATTATTTTATTATTTATTGCTCTCCCCTCCCTTCGTCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTAAAAAGAATTGGCCATCAATGATACTGAAGTTACGAATACTCAGATTTTAACAGAATCGAATTTGATTCATATATAATTCCTACAAATGAGTTAGCGAATGATGGATTCCGACTCCTAGATGTTGATAACCGAATTGTTTTGCCTATAAATTCTCAAATCCGAATTTTAGTAACCGCCGCAGATGTAATTCATTYTTGAACAATCCCTGYTYTTGGGGTAAAAGTTGATGGAABTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGGCCAGGCTTATTTTATGGACAATGTTCAGAAATTTGTGGGGCTAACCATAGTTTTATACCTATTGTAATCGAAAGTGTCCCTGTGAACWATTTTATTAAATGAATTTNTAACAGAGTAAATTYTT--CCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTAGGCAAGATCAAGCCCCGCGCGATTGCCATATCACTGATCAAGGGTTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGTTTAAACCCGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAAGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTACGGGCTTTGTCGATGGTCTCAAGTTGGGTGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTHGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTSAGANCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGGAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTAAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAWCTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAAAATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCC--------------- +>Drosophila_heteroneura +TTAATAATATTCTTATTTAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAGCGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTACTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATACTCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTGGTTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAATGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTGGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTTGGATATTTAATATTTATATTATTTTTTAATAGTTATATTAACCGATTCCTACTCCACGGACAATTAATTGAAATAATTTGAACGATTTTACCCGCCATTATTTTATTATTTATTGCTCTCCCCTCCCTTCGTCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTAAAAAGAATTGGCCATCAATGATACTGAAGTTACGAATACTCAGATTTTAACAGAATCGAATTTGATTCATATATAATTCCTACAAATGAGTTAGCGAACGATGGGTTCCGACTCCTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTAACCGCCGCAGATGTAATTCATTYTTGAACAATCCCTGCTCTTGGGGTAAAAGTTGATGGAACTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGGCCGGGCTTATTTTATGGACAATGTTCAGAAATTTGTGGGGCTAACCATAGTTTTATACCTATTGTAATCGAAAGTGTCCCTGTGAACTATTTTATTAAATGAATTTCTAACAGAGTAAATTYTT----------------------CCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCGATTGCCATATCACTGATCAAGGGTTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGTTTAAACCCGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAAGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAGCTGGGAGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACAACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACTTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTCATTTATTTATAATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGGCATACACAAAATTTGCACAAATC------------------------- +>Drosophila_differens +TTAATAATATTCTTATTAAAAATATAATTATCTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTAATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACGAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTACACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTGGGCCTTYAAGATAGCGCCTCGCCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTCGGGTACTTAATGTTTATATTATTTTTTAATAATTATATTAATCGGTTCCTACTTCATGGGCAATTAATTGAAATAATTTGAACAATTTTGCCCGCCATTATTTTATTATTTATTGCTCTTCCTTCCCTTCGTCTTCTTTACCTCCTAGATGAAATTAACGAACCCTCAGTTACTTTAAAAAGAATTGGTCATCAATGATATTGAAGTTACGAATACTCAGATTTTAACAGAATTGAATTTGATTCATACATAATTCCTACAAATGAGTTAGCAAACGATGGATTCCGTCTTTTAGATGTTGATAACCGAATTGTTTTACCCAYAAATTCTCAAATCCGAATTTTAGTAACTGCCGCGGATGTAATCCATTCTTGAACAATCCCCGCTCTTGGAGTAAAAGTTGATGGAACTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGACCGGGCTTATTCTACGGACAATGTTCAGAAATTTGTGGCGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTT--------------------------------CGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCGATTGCCATATCACTGATCAAGGGYTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTACTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAGCTGGGAGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGTGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACTTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAAAATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTTAATCGA +>Drosophila_planitibia +TTAATAATATTCTTATTAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAGCGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTAATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTACACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGATGCCTACCAGAAATGTCAACATGAGCTAACCTGGGCCTTCAARATAGCGCCTCACCTTTAATARAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTCGGRTACTTAATGTTTATATTATTTTTTAAYAATTATATTAAYCGGTTCCTACTCCAYGGRCAATTAATTGAAATAATTTGAACAATTTTGCCCGCCATTATTTTATTATTTATTGCTCTCCCCTCTCTTCGTCTTCTTTACCTCCTAGATGAAATTAACGAACCYTCAGTTACTTTAAAAAGAATTGGYCATCAATGATATTGAAGTTACGAATACTCAGATTTTAACAGAATCGAATTTGATTCATACATAATCCCTACAAATGAGTTAGCGAAYGATGGNTTCCGACTTTTAGANGTTGATAACCGAATTGTTTTACCYATAAATTCTCAAATCCGAATTTTAGTAACTGCCGCNGATGTAATCCATTCTTGAACAATCCCCGCTYTTGGAGTAAAAGTTGATGGAACTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGACCGGGCTTATTTTACGGACAATGTTCAGAAATTTGTGGGGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTYTT-------------------------------TCGATATACTCATTTTTGTKGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCGATTGCCATATCACTGATCAAGGGTTTCGATAAGGCCGGGGGGGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGTTTAAACCCGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATACGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAGCTGGGAGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACTTTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCC--------------- +>Drosophila_hemipeza +TTAATAATATTCTTAATAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGCTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAATGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACAACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCGACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCCCTATTAATTTTAGTTATAATTACCGTTTTAGTCGGATATTTAATATTTATATTATTTTTTAATAACTACATTAATCGATTTTTACTCCACGGACAATTAATTGAAATAATTTGAACAATTTTACCCGCCATTATTTTATTATYTATTGCTCTCCCTTCTTTACGTCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTAAAAAGAATTGGTCATCAATGATATTGAAGTTATGAATACTCAGATTTTAATAGAATTGAATTTGACTCTTATATAATCCCTACAAACGAGCTAACGAACGACGGATTTCGGCTATTAGATGTCGATAACCGAATTGTTTTACCTATAAATTCTCAAATTCGGATTTTAGTGACTGCCGCAGATGTAATCCATTCATGAACAATTCCGGCCCTTGGGGTAAAAGTTGATGGAACCCCTGGTCGATTAAATCAAACTAATTTTTTTATTAACCGACCAGGTTTATTTTACGGACAATGTTCAGAAATCTGCGGAGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTTAATTATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT----------------GGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCCAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACACGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGCTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGTGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGCATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCAGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACTTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAAGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTAATTTTTTTATAATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAA------------ +>Drosophila_ingens +TTAATAATATTCTTATTAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCRGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATTCCACACAGACATCATCGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATCTTAGTTATAATTACAGTTTTAGTGGGGTACTTAATATTTATACTATTTTTTAACTCTTATATTAACCGATTTTTACTACACGGACAATTAATTGAAATAATTTGAACAATCTTACCTGCAATTATTTTGTTATTCATTGCTCTACCTTCTTTACGACTTCTCTACCTTTTAGATGAAATCAATGAACCTTCAGTAACTTTAAAGAGAATTGGCCACCAATGATACTGAAGCTATGAATACTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTTGATAATCGAATCGTTTTACCCATAAATTCACAAATCCGAATTTTAGTGACAGCCGCAGATGTAATTCATTTTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAAMTCCTGGTCGTTTAAACCAAACTAATTTTTTTATTWACCGACCAGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGGGSTAATYATAGCTTTATACCTATTGTAATTGAAAGAGTCCCTGTTAATTATTTTATTAAATGAATTTYTAATAGAGTAAATTYTTTTCCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCTCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACACTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCAGTCATTCGTCTCGGACTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGANAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTNGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCCCAYTTATTTATTATATTAACCAAATATCGCCCTTCTTTCAGATTCCCCCTATTT----------------------------------------------------- +>Drosophila_neopicta +TTAATAATATTCTTATTAAAAATATAATTATTTTCATATTTGGTCCTTTCGTACTAAAATATAATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAACCAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTTATCAGCTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGAGCTTCTCCCCTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATTTTAGTAATAATTACTGTTTTAGTTGGATATTTAATATTTATGCTATTTTTTAATAGTTACATTAACCGATTTCTACTTCACGGACAATTAATTGAAATAATTTGAACGATCTTACCTGCAATTATTTTATTATTTATTGCTCTCCCTTCTTTACGACTTCTATACCTTTTAGATGAAATTAATGAGCCCTCAGTAACTTTAAAAAGAATTGGTCATCAATGATATTGAAGTTATGAGTATTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAGCAAACGATGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTGACCGCCGCAGATGTAATTCATTCTTGAACAATCCCTGCTCTAGGGGTAAAAGTTGATGGAACTCCTGGTCGCTTAAACCAAACTAATTTTTTTATTAACCGACCTGGTTTATTCTACGGACAATGTTCAGAAATTTGTGGAGCTAATCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT-TCCCCGCCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTTGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAGCCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATGTGATACCTTTCAAACAGGCGGTCGYAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATGTCAGGCCTAATTTATTTATTATATTAACCAAATATCAAAATTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGGGCAA---------------------------- +>Drosophila_substenoptera +TTAATAATATTCTTATTAAAAATACAATTATTTTCATATTTGGTCCTTTCGTACTAAAATATAATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTACAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGCAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGCTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTTTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACGCAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTCCAGGATAGAGCTTCACCCCTAATAGAACAACTTATTTTTTTCCACGATCACGCCCTATTAATTTTAGTAATAATTACTGTTTTAGTCGGATATTTAATATTTATATTATTTTTTAACAGGTATATTAACCGATTTCTTCTTCATGGCCAATTAATTGAAATAATTTGAACAATTTTGCCGGCAATTATTTTATTATTTATTGCTCTCCCCTCCCTACGACTTCTTTACCTTTTAGACGAAATTAATGAACCTTCAGTAACTTTAAAAAGAATTGGTCATCAATGATACTGAAGCTACGAATACTCAGATTTTAATAATGTTGAATTTGATTCTTATATAATTCCCACCAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTCGATAACCGAATCGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTGACAGCCGCAGATGTAATTCATTCTTGAACAATCCCCGCTTTAGGGGTAAAAGTTGACGGAACTCCAGGTCGTTTAAACCAAACTAATTTTTTTATCAACCGACCTGGCCTATTTTATGGACAATGTTCAGAAATTTGCGGAGCTAACCATAGTTTTATACCTATCGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTT--CCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTAATTTTTGTGGTGCCGCATCAGTTRAKACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAKCCCAGCGCCATTGCCATATCACTGATCAAGGGKTTCGATAAGGCCGAGGGTGCCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGATATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGGTTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAA------------ +>Drosophila_neoperkinsi +TTAATAAGATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGCTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCAATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCATGATCACGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTGGGGTACTTAATATTTATATTATTTTTTAACAATTATATTAACCGATTTCTACTACATGGACAATTAATTGAAATAATTTGAACGATTCTTCCCGCAATTATCTTATTATTTATTGCTCTCCCTTCTTTACGGCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTGAAAAGAATTGGTCACCAGTGATATTGAAGTTATGAATACTCAGATTTTAATAACGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAATAAATGACGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCGGATGTAATTCATTCCTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACCCCTGGCCGTTTAAACCAAACTAATTTTTTTATTAACCGGCCAGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGTGCTAACCATAGCTTTATACCTATTGTAATTGAAAGTGTCCCTGTTAATTATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT---------TGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCTCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACWCTTTGTTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTT------ +>Drosophila_melanocephala +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTATTAATGGATCAATTATTCATAAATCAATGGTTTTTAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTCAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTAGGATACTTAATATTTATACTATTTTTTAACAGTTATATTAACCGATTTCTACTACATGGACAACTAATTGAAATAATTTGAACAATTCTACCCGCAATTATTTTATTATTTATTGCTCTACCTTCTTTACGGCTTCTTTACCTTTTAGACGAAATTAATGAACCTTCGGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAAGTTATGAATATTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCCACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAACCGAATTATTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCAGATGTAATTCATTYTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACTCCTGGTCGATTAAACCAAACTAATTTTTTTATTAACCGACCAGGCTTATTTTATGGACAATGTTCAGAAATTTGTGGAGCTAATCATAGCTTTATACCTATTGTAATCGAAAGTGTTCCTGTTAAWTATWTTATTAAATGAATTTNTAATAGAGTAAATTCTT-------------------------------------------------TGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTRTTGGGCAAGATCAAGCCCAGTGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGACTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACTATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCATGGGCTAAACATTTCAGGCCTAACTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGC---------------------- +>Drosophila_hanaulae +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATYTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGCTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGGTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCTCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTGATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGARTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATCGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGAGCTTCACCTTTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATCTTAGTTATAATTACAGTTTTAGTGGGATACTTAATATTTATATTATTTTTTAACTCTTATATTAACCGATTTTTACTACACGGACAATTAATTGAAATAATTTGAACAATCTTACCTGCAATTATTTTGTTATTTATTGCTCTCCCTTCTTTACGACTTCTTTACCTTTTAGATGAAATCAATGAACCTTCAGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAAGCTATGAATACTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAATCGAATCGTTTTACCTATAAATTCACAAATCCGAATTTTAGTGACAGCCGCGGATGTAATTCATTCTTGAACAATCCCTGCCCTAGGGGTAAAAGTTGATGGAACTCCTGGTCGTTTAAACCAAACTAATTTTTTTATTAACCGACCAGGTTTATTTTACGGACAATGCTCGGAAATTTGTGGTGCTAACCATAGCTTTATACCTATTGTAATTGAAAGTGTCCCTGTTAAATATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT------CCCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGTGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAAYACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGAAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAA------------ +>Drosophila_cyrtoloma +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATCGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTCAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCATGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTGGGATACTTAATATTTATACTATTTTTTAACAGTTATATTAACCGATTTCTACTACATGGACAACTAATTGAAATAATTTGAACAATCCTGCCCGCAATTATTTTATTATTTATTGCTCTCCCTTCTTTACGGCTTCTTTMCCTTTTAAATGAAATTAATGAACCTTCGGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAATTTATGAATATTCAGATTTTAATAANGTTGAATTTGATYCATATATAATCCCTACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCAGAWGTAATTCATTTTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACTCCTGGTYGATTAAACCAAAMTAATTTTTTTATTAACCGACCVGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGVGCTAACCATAGTTTTATACCTATYGTAATCGAAAGCGTTCCTGKTAAWTATWTTATTAAATGAATTTNTAATAGAGTAAATTCTT--CCCGCCCTGGTTGAGGCTAGCCAAGAATGCCGATATACTHATTTTTGTGGTGCCNCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGYGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCATGGGCTAAACATTTCAGGCCTAACTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCT--------------------------------------------------------- diff --git a/example_files/pxrecode_example/Nucleotide.fa b/example_files/pxrecode_example/Nucleotide.fa new file mode 100644 index 0000000..e414f52 --- /dev/null +++ b/example_files/pxrecode_example/Nucleotide.fa @@ -0,0 +1,14 @@ +>MJM1652 +ATGGGGCCGATTAAGCTGGAGCTGCGGAGTCCAAAGAATCAGCTGGGTTTGGGAATCGATCCTAACCCGGATTGGACCATCGACGGTCTGCTGTCGGATTTGAATGTGCTTCAATCCAAGTTCAGTACTTTCTCCTTGTCAAGTAAAGAGAGCCCACAATTGCGGGAAGTTTCGAATGGTCAGAGTGGAATTAGGGGGAAAAAGTCCTTTGTGATCCGGGTATCTGAAGATGATGAGATTGATGATTGGGGAGGTGAAGACGGGGAAGTGGAAGTGAGGTCTGGCCGCATCTTAGTTCCGGCTTACAGGCTAGATTGCCATGATATCAGTCTTAGTGATGATTCAGAAGACGAGTCGACACCAACACGAGCCCATGGGCCTGCTATGGAGAAAACCAAGGTCGCCGATGTCATGTGTCTTGCGCTGTATGAATATCAGCTTGGCGTTCAGGAGGAGATCAAGAACCAATTATCTTCTTTGGTGGAAGGATTTCAAACTGCAAACGATAAGTTCATCTCTTCACTGGTTCAAGTTGAGAAAAATGCTGAAAGGAGGAGGGAAATGGATAGAAATCTTGACTTGCAATATCAGCACAAGATAGCTGAGGTGCTAGATAGTCATTTGAATTCTATTCAGAGGGATCATGAACATAGGTCCCGGTTGGAAGAAAAAAGAATAAAAGATGATGCAGCTCTTGAGGACACTAGAAGAAAAGAAAAGGCTTTTCAAGAAGAAAAGTTACGTCAACAAAAGGCCAGCGCAGAAAAAGAGGCTCGAATTGAGGCTGCCAAAAGAGCGGATGATGCTAGGAAGGCTGCACTAGAAGCTGAGAGAAAAGCTTTGGTTGAAGCTGCTGAAAAGTTGGCTAAAGAAAATGCAGCCAAGGCTGCTGCTTCTGCCAAAACAGATCCTGGAAACCAAAAAGAATCTAATGTAGACGTACAAAGTTCGAGAGTGGTTGTGTCTGATGCATCAGTTTCTGAAAAACCCATAGGTAGTATTGTTAGGGCTGCTGAAAGCGCTCTAAAACTGGAAGAAAAGAGGCGACATATGTACCTGGAATTCGATGAGAGAACACGTAGTCTGAATCCCAGCTCAAATAAGGATTTTGTCAGCTACGAGAGAAAAGTTGGCAGAGTGATTAGACAAATCAGTGGGTCAGTAGAGAATGTGCGAGCAAAAGCCAATGATTTGATCGAGATTTTGAACAATAGCATATTTCCTCGGCCTGTCAGCATGCTGATGCTAGCAAAGAAGGTCATCTCAGTCTATGAAGCTCCTAATATCTCTAATTCATCCGCTTTTGCATGCGGGCATGTTGTTGTTCTTGTCAGTGCACAGGTCCCACAATTCATGGATGTTCTTGTCGCAGAATTCCATAGGGTCTGCATTTATGCTGTTCCAAAACATCTTGTTTACTCAAAGTCAACTTTTGAGGTTAAAGAAGCATACTTTAAAGCTATTGGCTACCGAGAAGAAGATGGAAAGTTTGAGGAGACGGAGCGTTATTTGGATCGTTTGGAGTCATGTATGAAGTTATATGGGGCAGTGGTCCAGACACAAATTGACGGTGTTCAAAATATGCATGGGTTAGAGGAAGGCTGGGCATGGCTTGCTAGGTTCTTGAATGCCCTTCCTGTGAACAGGAACACGGCAGTTGCACTAGTAGCATTCTTGAGCATGGCTGGATATGCACTACACAGAAAATACAAATCTCAGTTCAGGAAGCTTCTCGGTGTCATCGATAAGAATTTTCTTCACAAATTAAAATTGCTCAAGGAAGACCCAAAGGTGAATATCAAAGTTAGAGAGCTTCAGGAATACATAGAAAGCAACAAGTTCCTTATTGAGCCCGAAGGATCACATCTTCAGGGCTCTCTATTATCTCGTGCTCTCGCTCCACAAGACGACCGTCAGGAGCAAAACTATTACTCACCAAATAGGTATTTTTACTGA +>DrobinSFB +ATGAGTCCGATTCAATTACGAAGTCCAGAGAATGTACTTGGGATGAAGATTGAGCCTTGCCCTGATTGGACATTCGATGGATTGTTCTCCGAGTTGAAGGAGCTTGATTCCAAGTTCAACTCCTTCTCTTTGTTCAATAAAGATAGCTCACGGGATGCTTTATGTGAAATGAAGAGCAAGAAGGGTTTTGTAATGGGAGCGGACGGGGACAATATTGAATGGGATGAAGGAGGTGTGGAAGAGTCAGTGGACCGAGGTTTAGGGACAGCAAATCGGTTCGGTTGTCTTGATCTTTTCGTTAGTGATAGTGATGATTCAGAGGATGAATTTGTACAAGAATTCAAAGGACCTTTAATGGAGAAAACAAGAGTAGTGGAAGATGCATGCCCCATTCTATTATATGAATTTCAGCTTGGCATTCAGGAAGGAATTAGAAATCAGATTTCATCATTGGAGGCAGGATTGCAAGTTGTCAAAGAAAAATCAACCTGTGGTCTGACTCATGTCGAGGAAAACAGTGAAGAGAGGCGTAGAATGGACAGGAAGCACGACATGGAACATCAGCGTATGATTGCAGAGGCCCTTGATGAGCATTTAACTGCTATTCAGAGGGATCATGAGCAGAGGTCCCGACTGGAACAAAAAAGAATACGAGATGATGCAGCACGAGAAGAAGCTAGAAGAAAGGAGAAGGCTATGCAAGAAGAGAAGTTACTGCAAGAGAAGGCCAAGGCTGCTGAAGAGGCTCGACTTGAGGCTGCACGGAAGGCGGAGGATGCCATAAAGATTGCATTGGAAGCTGAAAGAAAAGCACTTGCAGATGCGGCAGAGAAGACAGTTAAAGAAAATTCAACTCAACCTGCTGCTTCTGTCAAAGAGGTTTATGGAAACCACGATGATCCTGCCTCTGGTGTTCAAGCTACAAGATCAAACGTACCTGCATCAGATACCCCAGGTGGCAGCGTTAGAGCTGCAGAAAGTGCTTTGAAGATGGAGGAGAAGAGATGGCATAAGTACAAGGAACTACATGAGAAAAACCTCACATTGATGTCCAGCTCAAATATGGATTTTGTCAGTTATGAGCGGAGAATCAGTCGAGTGACTAGACTAATCTTGGGTTCTGTGGAGAATGTGCGAGCAAAAGCCAATGAACTGCTCAAGATTCTCACTGATCCTGTTTGTCCGCAATCTGTCAGCATGGTAATGATTGCAAAGAAGATCATATCTTCTTATGAAGATCCTGATGCTCCTGCCTCGTCCGCTTTTGCACGTGGACATGTTGTTGGTCTTGTTAGTGGACAGGTACCACAATTTATAGATATCCTTGTGGCAGAGTTCAATAGGGTCTGTATATATACTGTCCCCAAACATGTTCTCTACTCAAAGTCAGCTTTCCGAGAGAAAGATGCTTATGCTAAAGCCATGGGCTATCGAGAAGAAGACGGGAAGATTGAGGATACAGGCAGATACTTGGGTCGCCTTGAGGCATGCATGAAACTTTATGCGGCAGTGGTCCAGACTCAAGTCAATGGTGTTCAGAATCTGCACGGGCTGGAAGAAGGCTGGGCGTGGCTGGCAAGGTTCTTGAATTACCTCCCAGCTGATGGGAACACCGCAGTTGCGCTAGCTGCCTTCTTGAGTACGGCTGGATTTGCTCTTCACAGAAAATACAAGTCCCAGTTTAGGAAGTTGCTGCATGTAATCCATCAGCATTTTCTCGTCCAACTAAAGAAACAGGAGGAGGACCCGAAGGTGAGTATAAAGGTCAGAGAACTGCAGGAGTATATAGAATCGAAAAAGTATCTAGAGGAGCCAGAAGGATGGCGTCTTCAGGGCTCGTTGTTGTCGTCGCATTCTCTCGCTCCGCAAGCAGAATATCAACCACAGTATCATTCGCCAAATAGAAGATATTTCTACTGA +>DrolusSFB +ATGAATTCTACATCAGAAGTAGCTACCATCAGCGTCCGAACTGGATCAAATATGTCTGGATCTGGTGGACTGAAAAAAGGAAGCCTAGTTAGGGCGGCTGAAAATGCTCTAAACCTGGAGCAAAGAAGACTGAAAATGTACGAGGAATTCGACGATAGAAAGAAAACATTAGTCTCAAGTTCAAATAAGGATTTTTCCAGCCATGAGCGTCAAGTTGCACTGCAGATCAAACAAATAAGTGGATCTGTTGATAATGCAAGGGCCAAAGCTAGTGAACTAGTCAGGATTTTCGGTGATCCTGCTTGTCCTCAGGCAGTGAGTATGATGACATTTGCAAAAAAGGTCATCTCTAGGTTTGGAAACCCCGACGCAAACTTGAACACGTCTGCGTTTGCATGTGGATATGTTGTTGCTCTTGTTTCAGCACAGTTACCTCATGTAATGGATCTTACTATAGCTGAATTCCACAAAGCTTGCATCTATGCTGTTCCTAAGCATATTATGTACTCAAAGTCAGCATTTGAAACCAAAGATGCTTACCTAAAAGCCATTGGCTATCAAGAAGAAGATGGAAAGATTGAGGCAAGAGACCATTATCTAATACGCCTGAGGTGCTACATGAAGTTTTATGGGGCTCTGGTCCAGACACAAATTAACGGCGTCAGGAATGTACACGGTCTGGAAGAAGGCTGGGCCTGGCTTGCGAGGTTCGTGAATACCCTCCCAGCTAACATCTATACCGCAGTTGCGCTCGAGGCATTCCTTGGAATGGCAGGATTTGCTCTTCACCGAAAATACAAGTCTCAGTTCAAGAAGTTGCTGATGGCTGTTTCACAACATTATCTAAATGCTCTGGAGGCACGAGGAGAACCTGAGCTTAACTCTGTGATCAGGAGTCTTCGACAATATGTGGAAGATAAGAAGTTTCTTGTTGAGCCGGAAGGATCGCATCTCCCTGGCTCTTTATTATCTCGATCTTTTGAGCATGATCAAGGCCACCAAGAGCAAAATTATCACAGATGA +>NepSFB +ATGCGAGTGTCGGATGATGAGATCGATGATTTTGACGGAGAGGATGGAAAAGAGAATACTGAGCTAAGCTTAGTGCGGGCAAGTCGATTCAGTTTCCATGACAGTTATCGTAGCGGGAGTGATGATTCCAAAGACGAGCCGGTGCATCAACTCTATGGCCCCGTGATAGAGAAAATGGGAGTGGTGGAAGGCACATTACTTGAGGTTACACATCAATACCGACTTGGCATCAAGGAAGAAATTAGGAATCAGATATTTGCATTGGAGACAGAATTAGTTACTGCAAACGATAAGTATGCCTCTGCACTTGCTCAAGTTGAGAAAAATGCTGAAATGAGACGGGAAATAGATAGAAAGACTGATATACAATATCAGCGCAAGATTGCTGAAGCACTTGATAATCACTTGACTGCTGTTCAGAGGGATCATGAACATAGATCCCAACTGGAAGAAAAAAGAATAAGGGATGATGCAGCTCTTGAAGAATCCAGAAGAAAAGAAAAGGCTCTCCAAGAAGAAAAATTGCGCAAACAAAAGGCTAAGGAAGAAGAAGAGGCTCGACTTGAGGCTTCTAAAAGAGCTGATGAGGCAAGAAAGCGTTCGCTAGAAGCTGAAAGAAGAGCTAATGAAGCTGCAGAAAAGATAGCTAAAGAAAATTCAATGAAGGCTGCTACTGCCACTATTGCGGAACATGAGAACCAAATAGATTCCACCTTAGGGATTCAAAACGTACAATCAGATGGCTCTGGATCTGATGGGGCAAAAAAAGTGCAGTCCCCCGTGTTAGGTAACATAGTTAGGGCTGCTGAAAGTGCTCTAAAGCTGGAGGAAAGAAGACTACTGAAGTACAAGGAATCCGATGAAAAATACCAGGCATTACTCTCCAGTTCCAATAAGGGTTTTGTTGGCTATGAGCGGCAAATTGGTCGACGGATTAAACAAATAAGTGGTTCAATTGAGAATGTACGAGTAAAAGCAAATGAACTAGTTAAGATATTCAATGATCCTCTCTGTCCTCAATCTGTCAGTATGATGATGTTTGTGAAGAAGGTGATCTCTATATATGAAAACCCGAATGCAAACTTTGACACATCTGCTTTTGCATGTGGGCGTGTCATTGTTCTTGTCAGTGCACAGGTTCCACAAGTCATGGATCTTCTTCTCGCTCAGTTCCATACAGCATGTATATATACTGTTCCTAAGCATATAATTTACTCACAGTCAGCTTTTGCAACAAAAGAATCTTATTTCAAAGCCATCGGCTACCGGGAAGAAGATGGGAAGATTGAGGACAAGGACCATTATTTGGAACGTTTGAGATCGTGCATGAAATTATATGGGGCACTGGTCCAGACTCAAGTGGAAGGTTTTCGGAATATGCACGGCTTGGAAGAAGGCTGGACTTGGCTTGCAAGGTTCTTGAATGCACTCCCGGCTAACCTATACACCGCAGAAGCACTCGATGCATTCTTGAGGATGGCAGGATTTGCTCTCCATAGAAAATACAAGTCTCAGTTCAGGAAGTTACTGAAGGCCATCGCTGGGTATTTTGTTATACCGTTGAAAGCACGAGGAGGTGAGCCGAAGTTGAATTCTGTGATCAACAGGCTTCAAGACTACATAGAAATGAAAAGGTTCCTTGTGGAACCGGAGGGATGGCGTCCTCCAGGTTCTTTACTATCTCGAGCTTCTAATCCTGACACAATCCATCAAGATGAGTATTAG +>Beta +atgcgagtggatgatgatttgatgagtgattccgacgctgaggatggaaatgaggatagaagcttggtggcagcaactcgttttgattgcaatgatatttttctcagtgaaagtgatgattcagatggcgaaagtatgcagcggttgcaagttactgtcatggatccaattggagtggtagaaggtgcattccatgagataaaacatgaataccagcttggcgtcaaggaagaaataaggaaccaacttgtcacattggagacacagttggttgctgaaaaggagaagtctgcatcggcctacgttcaagttgagaaaaatactgatgctagacggcaaatggatagaaagctggacttgcattaccagcgcaagattgctgaagctcttgataatcacttgacagctattcaaagggatcatgaacacagaactcaaatggaagaaagaagaataagagatgacgctgcacttgaagaagccaaaagaaaagagaaggcattacaagaagaaagaattcgcctacagaaggcaaaagaagaagaggctaggcaggaggctgctaaaaaagctgaagaggctgcacaggaagctgaaagattggctaaagaagctgcagataaattggtgaaggaaaaatctgggaaggatgctattcatgcaaaaacaggcccagtttcggctttaccaaatgcaccatcaacttcatctacaccaaatgattcaaagacagtcaagtcagcaggcaacttagttagggctgcagaaaatgctctgaagcttgaggcaagaaggattcagacttacaaggagttagaagataggaaccaatcaatcatctctagttctaacatggacttccgccccaaagaacgggaaatcgctaggcaaataaatcaagtaacttgttcaataagcagtgtaagatcaaaagcgaataacctagtgaatatattcaacgatcgtgcttttcctcaatctgttactgtagcaatatttgcgaagaaggtcatctcttattttgaaacatcagagcagacgaatggttcttattttgcatgttgccatgtaatcacttatgttagtgcacaggtcccagctgtcatggaatgtctccttgcagagtttcacagagcttgtatctacactgttccgaaacatataatgagctcaaagtctgcatttggaacagaagataattatttcaaagccataggctataaggaagaagacggggagctagagaaaacagataactatctgaaacggttaggatctgtgatgaaactatatggggctctagtccagactgaagctgaaggagttcaaaatatgcatggactggaagaaggttggagatggcttgcaaggttcttaaatgctatcccgccaaatgagtacactgctgttgctctcgaagctttccttggaatggcagggtttgctctccacagaaaatacaaatctcagtttaggaagatactgagcttcatatataaggagtttgtgcatacgctgcgatcccgtgaagaccctagggttagttctgtgataagaaggctccaggtttacatagaatcacaagagtttctacaagagccagacggatggcgacttcagagcactcttctatctcacacttctgttccgaatgccgagtaccagcaagagcaatataaccataatacaccaagacgttttacctatcaaagatag +>Spol +atgatcaaattggagttacgatgtccgaagaatgtaaacggaatctcaattgacccgaaccctagttggaatttcaatgatcttatgtcggagttgagctcattggagaataagctctacaataatggttctgattctccgttaaaccctaaacctttcgtcaaatcaccagctcgcgattttcgcaagattggaaggagaggaaagaatgaggtaaaggcgaaggcattcgtaatgcgagtggatgatgatgatgacaagatggatgaagatgatgacgagatggatgaatccgacggcaaagatggaactgaggctaggagcttggtgccagtgagtcgatttacttgtaatgatatttatctcagtgaaagtgatgattcagacaacgaagagatgcagcagatgcaagtttctgtcatggataaaatgggggtggtagaaggtgcattccttgagctgacgcacgaacaccagcttggcgttaaggaggaaatcaggaaccaactagcagcattggagacacagttggtggttgaaaaggagaagtctacatcagcccttgttcaagttgagaaaaacactgatgctagacggcagatggacagaaagctggacttgcattaccaacgcaagattgctgaagctcttgataatcacttaacagccattcaaagggatcatgagcacatatcacagttagaagaaagaaaaataagagatgatgctgctgttgaagaagccaaaagaaaagagaaagctttgcaagaagaaaaattgcgccaacagaaagataaggaagaacaagaggcggctaaactggaggctgctaaaaaagctgaagaggagagaaaaactgcacaggaagctgaaaaattagctaaagaagctgcagataaattggacaaggaaaaggcaccctcaaccacatcagctccaaatgtgcgattggaagtaaagtcagcaggtaagttagtcagggctacagaaaatgctctgaaacttgaggagcgaaggcttcagacttacaaggaattagaggataggaaccaacagttaatcaactctggttctcacacggactacaaccgcgtagaacgggatattaagaggacgataagtcaaataagcgggacagtagaaaacgtaagatccaaaggaactaaactagtggagatcttgaacaacccagcatgccctcagtctgttgttgtagcaatgcttgcgaagaaggttatctctatttatgaagcaccaaacacaaatttcaacagttctgcttttgcatgtggccatgttattgtttatgttagctcacaggtcccagctgtcatggactgtctccttgctgagtttcacaaagcttgcatctacactgttccgaagcatataatgtactccaaggctggttttgaaactgaagaagcttattacaaagccattggctatagagaagatgggaagttagagacaacagattgctatctagaacgattagaatctctgatgaaactatacggggctctagttcagacggatgctcgtgttcagaacaaacatggcttggaagaaggttgggcttggcttgcacggtttttaaacggtctcccacctaatagatacaccgctgttgctctcggagctttcctagaaatggccgggtttgctctacatagaaaatataagaaccagtttacgaagatactgaacgccatttcaagggagtttgtgcctacactgagagcacgagacccaaatgctggttcaaaaataactaggatcttggattacatagaatcacagaaatttcttcaggagccagttggatggcgtcttcgggaagcgttgctgtcaaatagttctattccagaaccagaacataatcaacagcaatatcatcaacagcaatatcatcaacagcaatataatcatgcaccaaacagacgttatacttaccgaaggtag +>Dimu +TCAACGCAGAGTACGGGGGTACGGCAATTACTTCTCACAATGGGTCCGATTAAATTGGAACCACGTAGCCCGAAAAATCTGCTCGGGTTGGAAATTGATCCTAACCCGGATTGGACCTTTGACGATATGCTGTCGGAGCTGAATCAGCTTGAATCGAGGTTTAGCACAGTCTCTTTGTTAAGTGAAGAGAGATCATGGTCACGAGAGATGTCTAATGTTAAGAGAGGAATGAGGGGCAAGAAGGCATTTGTGATGCGAGTGACGGAGGATGAGGTGAGTGATTGGGGCGGTGAAGATGTGAAAGTGAGGTCTGGCCTCAGCATAGTGCCGGCTTATCAGCTCGATTGTCTTGATATCTGTCTCAGTGATGATTCAGAAGACGAATTGGTACTACAAGTCCAAGGGCCTGTGCTGGAGAAAACCAAGGTGGCTGAAGCTACATGCCTTGAGCTATATGAATACGAGCTTAGCGTTCAGGAGGAAATTAGGAACCAAATATTGTCTTTGGAGGCAGGATTGCAAATTGCAAATGATAAGTTAATCTCTTCACTTATTCAAGTTGAGAAAAATGCTGAAAGGAGGCGTGAAATGGATAGAAAGCTTGACATGCAATATCAGCGCAAAATAGCTGAGGTGTTGGATAGTCATTTGACTGCTATTCAAAGGGATCATGAGCATAGGTCCCAGCTGGAAGAAAAAAAAATAAGAGATGATTCAGCCCTTGAAGCTAGAAGAAAAGAAAAGGTTTTGCAAGAAGAAAAGCTACGTCAACAAAAGGCCAAGGCTGAAGAAGAGGCTCGACTTGAGGCTGCTAAAAGAGCTGATGACGCAAGAAAGGCTGCACTAGAAGCTGAAAGCAAAGCACTTGCTGAAACTGCAGAAAATATGGCTAAAGAAAATTCAGCCAAGATTGCAGCTTCTGGCATAATGGTTCATGAAAACCAAAAAGATTCCACCTTAGGCATTCAAACTGCAAGATCAAATGTGGCTGCATCTGATACATCAGGAACAAAGCCCACAGGTAGCATTGTTAGGGCTTCCGAAAGCGCTCTAAACCTTGAAGAGAAGAGACGACATTTGTACCTGGAATTAGAAGCTAAAGCCCAGTCTTTGATGTCCAGGTCAAATAAGGATTTTGTCAGCTATGAGCGGCGAATTGGTCGAGTGATTAGACAAATTTGTTGGTCGGTAGAGAATGTGCGAGGAAAATTCAAAGAATTGATCGGGATTCTCAATGATCCCGTCTGGCCTCAGTCTGTCGGCATGCTGATACTTGCAAAGAAGGTCATCTCTGCATATGAAAATCCTAATACCCCTGATTCAACTATTTTTGCATGCGGACAGGTTGTTGTTCTTGTCAGTTCCAAGGTCCCGCAGTTCATGGATGTTCTTGTTGCGGAATTCCATAGGGTCTGTATCTATACTGTCCCAAAAGATCTTATCTACTCAAAGTCAGCTTTTGAGGTGGAAGATGATTATTTTAAAGCCATTGGCTACCGTGAAGAAGATATAAAGATAGAGGAAAAAAAAACAACAGCAGCAGCAGCAGCACAGCCACTTCCCACTAGAAAGATATGGGACACAGACAGTTATTTGGGGCGTCTGGAGTCATGCATGAAGTTGTATGGGGCGGTGGTCCAGACACAAGTTGATGGTGTCCAGAATATGCATGGGTTGGAGGAAGGGTGGGCGTGGCTTGCGAGATTCGGGAATGCCCTTTCAGCGAACATGAACACTGCAGTCGCATTAGCAGCATTTTTGCATATGGCAGGATACTCACTCCACAGAAAATACAAGTCTCAGTTCAGGAAGTTGCTTAGTGTCATCAATCAGAATTTTCTCAAGGAACTGAAAACACTGAAGGAAGATGGAGATCTAAAGGTGAAAATCAAGGTCATGGAACTTCAGCAATATATAGAAACGAAAAAGTACCTAGTGGAACCCGAAGGATCACGCCTTTTTCAAGACCCGCTAGTTTCTCATTCTGCCACTCTAGAAGAAGAGCATCATGAGCAACGGTATTATTCACCAAATAGGTACTTTTACTGA diff --git a/example_files/pxrevcomp_example/Nucleotide.fa b/example_files/pxrevcomp_example/Nucleotide.fa new file mode 100644 index 0000000..e414f52 --- /dev/null +++ b/example_files/pxrevcomp_example/Nucleotide.fa @@ -0,0 +1,14 @@ +>MJM1652 +ATGGGGCCGATTAAGCTGGAGCTGCGGAGTCCAAAGAATCAGCTGGGTTTGGGAATCGATCCTAACCCGGATTGGACCATCGACGGTCTGCTGTCGGATTTGAATGTGCTTCAATCCAAGTTCAGTACTTTCTCCTTGTCAAGTAAAGAGAGCCCACAATTGCGGGAAGTTTCGAATGGTCAGAGTGGAATTAGGGGGAAAAAGTCCTTTGTGATCCGGGTATCTGAAGATGATGAGATTGATGATTGGGGAGGTGAAGACGGGGAAGTGGAAGTGAGGTCTGGCCGCATCTTAGTTCCGGCTTACAGGCTAGATTGCCATGATATCAGTCTTAGTGATGATTCAGAAGACGAGTCGACACCAACACGAGCCCATGGGCCTGCTATGGAGAAAACCAAGGTCGCCGATGTCATGTGTCTTGCGCTGTATGAATATCAGCTTGGCGTTCAGGAGGAGATCAAGAACCAATTATCTTCTTTGGTGGAAGGATTTCAAACTGCAAACGATAAGTTCATCTCTTCACTGGTTCAAGTTGAGAAAAATGCTGAAAGGAGGAGGGAAATGGATAGAAATCTTGACTTGCAATATCAGCACAAGATAGCTGAGGTGCTAGATAGTCATTTGAATTCTATTCAGAGGGATCATGAACATAGGTCCCGGTTGGAAGAAAAAAGAATAAAAGATGATGCAGCTCTTGAGGACACTAGAAGAAAAGAAAAGGCTTTTCAAGAAGAAAAGTTACGTCAACAAAAGGCCAGCGCAGAAAAAGAGGCTCGAATTGAGGCTGCCAAAAGAGCGGATGATGCTAGGAAGGCTGCACTAGAAGCTGAGAGAAAAGCTTTGGTTGAAGCTGCTGAAAAGTTGGCTAAAGAAAATGCAGCCAAGGCTGCTGCTTCTGCCAAAACAGATCCTGGAAACCAAAAAGAATCTAATGTAGACGTACAAAGTTCGAGAGTGGTTGTGTCTGATGCATCAGTTTCTGAAAAACCCATAGGTAGTATTGTTAGGGCTGCTGAAAGCGCTCTAAAACTGGAAGAAAAGAGGCGACATATGTACCTGGAATTCGATGAGAGAACACGTAGTCTGAATCCCAGCTCAAATAAGGATTTTGTCAGCTACGAGAGAAAAGTTGGCAGAGTGATTAGACAAATCAGTGGGTCAGTAGAGAATGTGCGAGCAAAAGCCAATGATTTGATCGAGATTTTGAACAATAGCATATTTCCTCGGCCTGTCAGCATGCTGATGCTAGCAAAGAAGGTCATCTCAGTCTATGAAGCTCCTAATATCTCTAATTCATCCGCTTTTGCATGCGGGCATGTTGTTGTTCTTGTCAGTGCACAGGTCCCACAATTCATGGATGTTCTTGTCGCAGAATTCCATAGGGTCTGCATTTATGCTGTTCCAAAACATCTTGTTTACTCAAAGTCAACTTTTGAGGTTAAAGAAGCATACTTTAAAGCTATTGGCTACCGAGAAGAAGATGGAAAGTTTGAGGAGACGGAGCGTTATTTGGATCGTTTGGAGTCATGTATGAAGTTATATGGGGCAGTGGTCCAGACACAAATTGACGGTGTTCAAAATATGCATGGGTTAGAGGAAGGCTGGGCATGGCTTGCTAGGTTCTTGAATGCCCTTCCTGTGAACAGGAACACGGCAGTTGCACTAGTAGCATTCTTGAGCATGGCTGGATATGCACTACACAGAAAATACAAATCTCAGTTCAGGAAGCTTCTCGGTGTCATCGATAAGAATTTTCTTCACAAATTAAAATTGCTCAAGGAAGACCCAAAGGTGAATATCAAAGTTAGAGAGCTTCAGGAATACATAGAAAGCAACAAGTTCCTTATTGAGCCCGAAGGATCACATCTTCAGGGCTCTCTATTATCTCGTGCTCTCGCTCCACAAGACGACCGTCAGGAGCAAAACTATTACTCACCAAATAGGTATTTTTACTGA +>DrobinSFB +ATGAGTCCGATTCAATTACGAAGTCCAGAGAATGTACTTGGGATGAAGATTGAGCCTTGCCCTGATTGGACATTCGATGGATTGTTCTCCGAGTTGAAGGAGCTTGATTCCAAGTTCAACTCCTTCTCTTTGTTCAATAAAGATAGCTCACGGGATGCTTTATGTGAAATGAAGAGCAAGAAGGGTTTTGTAATGGGAGCGGACGGGGACAATATTGAATGGGATGAAGGAGGTGTGGAAGAGTCAGTGGACCGAGGTTTAGGGACAGCAAATCGGTTCGGTTGTCTTGATCTTTTCGTTAGTGATAGTGATGATTCAGAGGATGAATTTGTACAAGAATTCAAAGGACCTTTAATGGAGAAAACAAGAGTAGTGGAAGATGCATGCCCCATTCTATTATATGAATTTCAGCTTGGCATTCAGGAAGGAATTAGAAATCAGATTTCATCATTGGAGGCAGGATTGCAAGTTGTCAAAGAAAAATCAACCTGTGGTCTGACTCATGTCGAGGAAAACAGTGAAGAGAGGCGTAGAATGGACAGGAAGCACGACATGGAACATCAGCGTATGATTGCAGAGGCCCTTGATGAGCATTTAACTGCTATTCAGAGGGATCATGAGCAGAGGTCCCGACTGGAACAAAAAAGAATACGAGATGATGCAGCACGAGAAGAAGCTAGAAGAAAGGAGAAGGCTATGCAAGAAGAGAAGTTACTGCAAGAGAAGGCCAAGGCTGCTGAAGAGGCTCGACTTGAGGCTGCACGGAAGGCGGAGGATGCCATAAAGATTGCATTGGAAGCTGAAAGAAAAGCACTTGCAGATGCGGCAGAGAAGACAGTTAAAGAAAATTCAACTCAACCTGCTGCTTCTGTCAAAGAGGTTTATGGAAACCACGATGATCCTGCCTCTGGTGTTCAAGCTACAAGATCAAACGTACCTGCATCAGATACCCCAGGTGGCAGCGTTAGAGCTGCAGAAAGTGCTTTGAAGATGGAGGAGAAGAGATGGCATAAGTACAAGGAACTACATGAGAAAAACCTCACATTGATGTCCAGCTCAAATATGGATTTTGTCAGTTATGAGCGGAGAATCAGTCGAGTGACTAGACTAATCTTGGGTTCTGTGGAGAATGTGCGAGCAAAAGCCAATGAACTGCTCAAGATTCTCACTGATCCTGTTTGTCCGCAATCTGTCAGCATGGTAATGATTGCAAAGAAGATCATATCTTCTTATGAAGATCCTGATGCTCCTGCCTCGTCCGCTTTTGCACGTGGACATGTTGTTGGTCTTGTTAGTGGACAGGTACCACAATTTATAGATATCCTTGTGGCAGAGTTCAATAGGGTCTGTATATATACTGTCCCCAAACATGTTCTCTACTCAAAGTCAGCTTTCCGAGAGAAAGATGCTTATGCTAAAGCCATGGGCTATCGAGAAGAAGACGGGAAGATTGAGGATACAGGCAGATACTTGGGTCGCCTTGAGGCATGCATGAAACTTTATGCGGCAGTGGTCCAGACTCAAGTCAATGGTGTTCAGAATCTGCACGGGCTGGAAGAAGGCTGGGCGTGGCTGGCAAGGTTCTTGAATTACCTCCCAGCTGATGGGAACACCGCAGTTGCGCTAGCTGCCTTCTTGAGTACGGCTGGATTTGCTCTTCACAGAAAATACAAGTCCCAGTTTAGGAAGTTGCTGCATGTAATCCATCAGCATTTTCTCGTCCAACTAAAGAAACAGGAGGAGGACCCGAAGGTGAGTATAAAGGTCAGAGAACTGCAGGAGTATATAGAATCGAAAAAGTATCTAGAGGAGCCAGAAGGATGGCGTCTTCAGGGCTCGTTGTTGTCGTCGCATTCTCTCGCTCCGCAAGCAGAATATCAACCACAGTATCATTCGCCAAATAGAAGATATTTCTACTGA +>DrolusSFB +ATGAATTCTACATCAGAAGTAGCTACCATCAGCGTCCGAACTGGATCAAATATGTCTGGATCTGGTGGACTGAAAAAAGGAAGCCTAGTTAGGGCGGCTGAAAATGCTCTAAACCTGGAGCAAAGAAGACTGAAAATGTACGAGGAATTCGACGATAGAAAGAAAACATTAGTCTCAAGTTCAAATAAGGATTTTTCCAGCCATGAGCGTCAAGTTGCACTGCAGATCAAACAAATAAGTGGATCTGTTGATAATGCAAGGGCCAAAGCTAGTGAACTAGTCAGGATTTTCGGTGATCCTGCTTGTCCTCAGGCAGTGAGTATGATGACATTTGCAAAAAAGGTCATCTCTAGGTTTGGAAACCCCGACGCAAACTTGAACACGTCTGCGTTTGCATGTGGATATGTTGTTGCTCTTGTTTCAGCACAGTTACCTCATGTAATGGATCTTACTATAGCTGAATTCCACAAAGCTTGCATCTATGCTGTTCCTAAGCATATTATGTACTCAAAGTCAGCATTTGAAACCAAAGATGCTTACCTAAAAGCCATTGGCTATCAAGAAGAAGATGGAAAGATTGAGGCAAGAGACCATTATCTAATACGCCTGAGGTGCTACATGAAGTTTTATGGGGCTCTGGTCCAGACACAAATTAACGGCGTCAGGAATGTACACGGTCTGGAAGAAGGCTGGGCCTGGCTTGCGAGGTTCGTGAATACCCTCCCAGCTAACATCTATACCGCAGTTGCGCTCGAGGCATTCCTTGGAATGGCAGGATTTGCTCTTCACCGAAAATACAAGTCTCAGTTCAAGAAGTTGCTGATGGCTGTTTCACAACATTATCTAAATGCTCTGGAGGCACGAGGAGAACCTGAGCTTAACTCTGTGATCAGGAGTCTTCGACAATATGTGGAAGATAAGAAGTTTCTTGTTGAGCCGGAAGGATCGCATCTCCCTGGCTCTTTATTATCTCGATCTTTTGAGCATGATCAAGGCCACCAAGAGCAAAATTATCACAGATGA +>NepSFB +ATGCGAGTGTCGGATGATGAGATCGATGATTTTGACGGAGAGGATGGAAAAGAGAATACTGAGCTAAGCTTAGTGCGGGCAAGTCGATTCAGTTTCCATGACAGTTATCGTAGCGGGAGTGATGATTCCAAAGACGAGCCGGTGCATCAACTCTATGGCCCCGTGATAGAGAAAATGGGAGTGGTGGAAGGCACATTACTTGAGGTTACACATCAATACCGACTTGGCATCAAGGAAGAAATTAGGAATCAGATATTTGCATTGGAGACAGAATTAGTTACTGCAAACGATAAGTATGCCTCTGCACTTGCTCAAGTTGAGAAAAATGCTGAAATGAGACGGGAAATAGATAGAAAGACTGATATACAATATCAGCGCAAGATTGCTGAAGCACTTGATAATCACTTGACTGCTGTTCAGAGGGATCATGAACATAGATCCCAACTGGAAGAAAAAAGAATAAGGGATGATGCAGCTCTTGAAGAATCCAGAAGAAAAGAAAAGGCTCTCCAAGAAGAAAAATTGCGCAAACAAAAGGCTAAGGAAGAAGAAGAGGCTCGACTTGAGGCTTCTAAAAGAGCTGATGAGGCAAGAAAGCGTTCGCTAGAAGCTGAAAGAAGAGCTAATGAAGCTGCAGAAAAGATAGCTAAAGAAAATTCAATGAAGGCTGCTACTGCCACTATTGCGGAACATGAGAACCAAATAGATTCCACCTTAGGGATTCAAAACGTACAATCAGATGGCTCTGGATCTGATGGGGCAAAAAAAGTGCAGTCCCCCGTGTTAGGTAACATAGTTAGGGCTGCTGAAAGTGCTCTAAAGCTGGAGGAAAGAAGACTACTGAAGTACAAGGAATCCGATGAAAAATACCAGGCATTACTCTCCAGTTCCAATAAGGGTTTTGTTGGCTATGAGCGGCAAATTGGTCGACGGATTAAACAAATAAGTGGTTCAATTGAGAATGTACGAGTAAAAGCAAATGAACTAGTTAAGATATTCAATGATCCTCTCTGTCCTCAATCTGTCAGTATGATGATGTTTGTGAAGAAGGTGATCTCTATATATGAAAACCCGAATGCAAACTTTGACACATCTGCTTTTGCATGTGGGCGTGTCATTGTTCTTGTCAGTGCACAGGTTCCACAAGTCATGGATCTTCTTCTCGCTCAGTTCCATACAGCATGTATATATACTGTTCCTAAGCATATAATTTACTCACAGTCAGCTTTTGCAACAAAAGAATCTTATTTCAAAGCCATCGGCTACCGGGAAGAAGATGGGAAGATTGAGGACAAGGACCATTATTTGGAACGTTTGAGATCGTGCATGAAATTATATGGGGCACTGGTCCAGACTCAAGTGGAAGGTTTTCGGAATATGCACGGCTTGGAAGAAGGCTGGACTTGGCTTGCAAGGTTCTTGAATGCACTCCCGGCTAACCTATACACCGCAGAAGCACTCGATGCATTCTTGAGGATGGCAGGATTTGCTCTCCATAGAAAATACAAGTCTCAGTTCAGGAAGTTACTGAAGGCCATCGCTGGGTATTTTGTTATACCGTTGAAAGCACGAGGAGGTGAGCCGAAGTTGAATTCTGTGATCAACAGGCTTCAAGACTACATAGAAATGAAAAGGTTCCTTGTGGAACCGGAGGGATGGCGTCCTCCAGGTTCTTTACTATCTCGAGCTTCTAATCCTGACACAATCCATCAAGATGAGTATTAG +>Beta +atgcgagtggatgatgatttgatgagtgattccgacgctgaggatggaaatgaggatagaagcttggtggcagcaactcgttttgattgcaatgatatttttctcagtgaaagtgatgattcagatggcgaaagtatgcagcggttgcaagttactgtcatggatccaattggagtggtagaaggtgcattccatgagataaaacatgaataccagcttggcgtcaaggaagaaataaggaaccaacttgtcacattggagacacagttggttgctgaaaaggagaagtctgcatcggcctacgttcaagttgagaaaaatactgatgctagacggcaaatggatagaaagctggacttgcattaccagcgcaagattgctgaagctcttgataatcacttgacagctattcaaagggatcatgaacacagaactcaaatggaagaaagaagaataagagatgacgctgcacttgaagaagccaaaagaaaagagaaggcattacaagaagaaagaattcgcctacagaaggcaaaagaagaagaggctaggcaggaggctgctaaaaaagctgaagaggctgcacaggaagctgaaagattggctaaagaagctgcagataaattggtgaaggaaaaatctgggaaggatgctattcatgcaaaaacaggcccagtttcggctttaccaaatgcaccatcaacttcatctacaccaaatgattcaaagacagtcaagtcagcaggcaacttagttagggctgcagaaaatgctctgaagcttgaggcaagaaggattcagacttacaaggagttagaagataggaaccaatcaatcatctctagttctaacatggacttccgccccaaagaacgggaaatcgctaggcaaataaatcaagtaacttgttcaataagcagtgtaagatcaaaagcgaataacctagtgaatatattcaacgatcgtgcttttcctcaatctgttactgtagcaatatttgcgaagaaggtcatctcttattttgaaacatcagagcagacgaatggttcttattttgcatgttgccatgtaatcacttatgttagtgcacaggtcccagctgtcatggaatgtctccttgcagagtttcacagagcttgtatctacactgttccgaaacatataatgagctcaaagtctgcatttggaacagaagataattatttcaaagccataggctataaggaagaagacggggagctagagaaaacagataactatctgaaacggttaggatctgtgatgaaactatatggggctctagtccagactgaagctgaaggagttcaaaatatgcatggactggaagaaggttggagatggcttgcaaggttcttaaatgctatcccgccaaatgagtacactgctgttgctctcgaagctttccttggaatggcagggtttgctctccacagaaaatacaaatctcagtttaggaagatactgagcttcatatataaggagtttgtgcatacgctgcgatcccgtgaagaccctagggttagttctgtgataagaaggctccaggtttacatagaatcacaagagtttctacaagagccagacggatggcgacttcagagcactcttctatctcacacttctgttccgaatgccgagtaccagcaagagcaatataaccataatacaccaagacgttttacctatcaaagatag +>Spol +atgatcaaattggagttacgatgtccgaagaatgtaaacggaatctcaattgacccgaaccctagttggaatttcaatgatcttatgtcggagttgagctcattggagaataagctctacaataatggttctgattctccgttaaaccctaaacctttcgtcaaatcaccagctcgcgattttcgcaagattggaaggagaggaaagaatgaggtaaaggcgaaggcattcgtaatgcgagtggatgatgatgatgacaagatggatgaagatgatgacgagatggatgaatccgacggcaaagatggaactgaggctaggagcttggtgccagtgagtcgatttacttgtaatgatatttatctcagtgaaagtgatgattcagacaacgaagagatgcagcagatgcaagtttctgtcatggataaaatgggggtggtagaaggtgcattccttgagctgacgcacgaacaccagcttggcgttaaggaggaaatcaggaaccaactagcagcattggagacacagttggtggttgaaaaggagaagtctacatcagcccttgttcaagttgagaaaaacactgatgctagacggcagatggacagaaagctggacttgcattaccaacgcaagattgctgaagctcttgataatcacttaacagccattcaaagggatcatgagcacatatcacagttagaagaaagaaaaataagagatgatgctgctgttgaagaagccaaaagaaaagagaaagctttgcaagaagaaaaattgcgccaacagaaagataaggaagaacaagaggcggctaaactggaggctgctaaaaaagctgaagaggagagaaaaactgcacaggaagctgaaaaattagctaaagaagctgcagataaattggacaaggaaaaggcaccctcaaccacatcagctccaaatgtgcgattggaagtaaagtcagcaggtaagttagtcagggctacagaaaatgctctgaaacttgaggagcgaaggcttcagacttacaaggaattagaggataggaaccaacagttaatcaactctggttctcacacggactacaaccgcgtagaacgggatattaagaggacgataagtcaaataagcgggacagtagaaaacgtaagatccaaaggaactaaactagtggagatcttgaacaacccagcatgccctcagtctgttgttgtagcaatgcttgcgaagaaggttatctctatttatgaagcaccaaacacaaatttcaacagttctgcttttgcatgtggccatgttattgtttatgttagctcacaggtcccagctgtcatggactgtctccttgctgagtttcacaaagcttgcatctacactgttccgaagcatataatgtactccaaggctggttttgaaactgaagaagcttattacaaagccattggctatagagaagatgggaagttagagacaacagattgctatctagaacgattagaatctctgatgaaactatacggggctctagttcagacggatgctcgtgttcagaacaaacatggcttggaagaaggttgggcttggcttgcacggtttttaaacggtctcccacctaatagatacaccgctgttgctctcggagctttcctagaaatggccgggtttgctctacatagaaaatataagaaccagtttacgaagatactgaacgccatttcaagggagtttgtgcctacactgagagcacgagacccaaatgctggttcaaaaataactaggatcttggattacatagaatcacagaaatttcttcaggagccagttggatggcgtcttcgggaagcgttgctgtcaaatagttctattccagaaccagaacataatcaacagcaatatcatcaacagcaatatcatcaacagcaatataatcatgcaccaaacagacgttatacttaccgaaggtag +>Dimu +TCAACGCAGAGTACGGGGGTACGGCAATTACTTCTCACAATGGGTCCGATTAAATTGGAACCACGTAGCCCGAAAAATCTGCTCGGGTTGGAAATTGATCCTAACCCGGATTGGACCTTTGACGATATGCTGTCGGAGCTGAATCAGCTTGAATCGAGGTTTAGCACAGTCTCTTTGTTAAGTGAAGAGAGATCATGGTCACGAGAGATGTCTAATGTTAAGAGAGGAATGAGGGGCAAGAAGGCATTTGTGATGCGAGTGACGGAGGATGAGGTGAGTGATTGGGGCGGTGAAGATGTGAAAGTGAGGTCTGGCCTCAGCATAGTGCCGGCTTATCAGCTCGATTGTCTTGATATCTGTCTCAGTGATGATTCAGAAGACGAATTGGTACTACAAGTCCAAGGGCCTGTGCTGGAGAAAACCAAGGTGGCTGAAGCTACATGCCTTGAGCTATATGAATACGAGCTTAGCGTTCAGGAGGAAATTAGGAACCAAATATTGTCTTTGGAGGCAGGATTGCAAATTGCAAATGATAAGTTAATCTCTTCACTTATTCAAGTTGAGAAAAATGCTGAAAGGAGGCGTGAAATGGATAGAAAGCTTGACATGCAATATCAGCGCAAAATAGCTGAGGTGTTGGATAGTCATTTGACTGCTATTCAAAGGGATCATGAGCATAGGTCCCAGCTGGAAGAAAAAAAAATAAGAGATGATTCAGCCCTTGAAGCTAGAAGAAAAGAAAAGGTTTTGCAAGAAGAAAAGCTACGTCAACAAAAGGCCAAGGCTGAAGAAGAGGCTCGACTTGAGGCTGCTAAAAGAGCTGATGACGCAAGAAAGGCTGCACTAGAAGCTGAAAGCAAAGCACTTGCTGAAACTGCAGAAAATATGGCTAAAGAAAATTCAGCCAAGATTGCAGCTTCTGGCATAATGGTTCATGAAAACCAAAAAGATTCCACCTTAGGCATTCAAACTGCAAGATCAAATGTGGCTGCATCTGATACATCAGGAACAAAGCCCACAGGTAGCATTGTTAGGGCTTCCGAAAGCGCTCTAAACCTTGAAGAGAAGAGACGACATTTGTACCTGGAATTAGAAGCTAAAGCCCAGTCTTTGATGTCCAGGTCAAATAAGGATTTTGTCAGCTATGAGCGGCGAATTGGTCGAGTGATTAGACAAATTTGTTGGTCGGTAGAGAATGTGCGAGGAAAATTCAAAGAATTGATCGGGATTCTCAATGATCCCGTCTGGCCTCAGTCTGTCGGCATGCTGATACTTGCAAAGAAGGTCATCTCTGCATATGAAAATCCTAATACCCCTGATTCAACTATTTTTGCATGCGGACAGGTTGTTGTTCTTGTCAGTTCCAAGGTCCCGCAGTTCATGGATGTTCTTGTTGCGGAATTCCATAGGGTCTGTATCTATACTGTCCCAAAAGATCTTATCTACTCAAAGTCAGCTTTTGAGGTGGAAGATGATTATTTTAAAGCCATTGGCTACCGTGAAGAAGATATAAAGATAGAGGAAAAAAAAACAACAGCAGCAGCAGCAGCACAGCCACTTCCCACTAGAAAGATATGGGACACAGACAGTTATTTGGGGCGTCTGGAGTCATGCATGAAGTTGTATGGGGCGGTGGTCCAGACACAAGTTGATGGTGTCCAGAATATGCATGGGTTGGAGGAAGGGTGGGCGTGGCTTGCGAGATTCGGGAATGCCCTTTCAGCGAACATGAACACTGCAGTCGCATTAGCAGCATTTTTGCATATGGCAGGATACTCACTCCACAGAAAATACAAGTCTCAGTTCAGGAAGTTGCTTAGTGTCATCAATCAGAATTTTCTCAAGGAACTGAAAACACTGAAGGAAGATGGAGATCTAAAGGTGAAAATCAAGGTCATGGAACTTCAGCAATATATAGAAACGAAAAAGTACCTAGTGGAACCCGAAGGATCACGCCTTTTTCAAGACCCGCTAGTTTCTCATTCTGCCACTCTAGAAGAAGAGCATCATGAGCAACGGTATTATTCACCAAATAGGTACTTTTACTGA diff --git a/example_files/pxrls_example/newnames.txt b/example_files/pxrls_example/newnames.txt new file mode 100644 index 0000000..4525657 --- /dev/null +++ b/example_files/pxrls_example/newnames.txt @@ -0,0 +1,6 @@ +Cinclus_mexicanus +Anodorhynchus_hyacinthinus +Stellula_calliope +Anser_anser +Gallus_gallus + diff --git a/example_files/pxrls_example/oldnames.txt b/example_files/pxrls_example/oldnames.txt new file mode 100644 index 0000000..11ae26f --- /dev/null +++ b/example_files/pxrls_example/oldnames.txt @@ -0,0 +1,6 @@ +TaxonA +TaxonB +TaxonC +TaxonD +TaxonE + diff --git a/example_files/pxrls_example/test.fa b/example_files/pxrls_example/test.fa new file mode 100644 index 0000000..d356f56 --- /dev/null +++ b/example_files/pxrls_example/test.fa @@ -0,0 +1,10 @@ +>TaxonA +AAATTTCCCTGTCCCTTTAA +>TaxonB +GCTCGAGGGGCCCCAAGACC +>TaxonC +ACGCTCCCCCTTAAAAATGA +>TaxonD +TCCTTGTTCAACTCCGGTGG +>TaxonE +TTACTATTCCCCCCCGCCGG \ No newline at end of file diff --git a/example_files/pxrlt_example/kingdoms.newnames.txt b/example_files/pxrlt_example/kingdoms.newnames.txt new file mode 100644 index 0000000..52ba727 --- /dev/null +++ b/example_files/pxrlt_example/kingdoms.newnames.txt @@ -0,0 +1,9 @@ +Animal +Archaea +Eubacteria +Fungi +Plant +Amoebozoa +Excavata +SAR + diff --git a/example_files/pxrlt_example/kingdoms.oldnames.txt b/example_files/pxrlt_example/kingdoms.oldnames.txt new file mode 100644 index 0000000..c7c2224 --- /dev/null +++ b/example_files/pxrlt_example/kingdoms.oldnames.txt @@ -0,0 +1,9 @@ +Symsagitti +Archaeoglobus.fulgidus.DSM4304 +Frankiaceae +basGeastrumpectinatum +Andreaeobryaceae1 +Mastigamoebabalamuthi +Monocercomonoidessp +Theileriaparva + diff --git a/example_files/pxrlt_example/kingdoms.tre b/example_files/pxrlt_example/kingdoms.tre new file mode 100644 index 0000000..f488770 --- /dev/null +++ b/example_files/pxrlt_example/kingdoms.tre @@ -0,0 +1 @@ +(Frankiaceae:4200.0,('Archaeoglobus.fulgidus.DSM4304':3806.01025,((((Theileriaparva:1626.042732,Andreaeobryaceae1:1626.027667):72.380184,Monocercomonoidessp:1698.422916):74.73122,Mastigamoebabalamuthi:1773.154136):7.937535,(Symsagitti:1295.717544,basGeastrumpectinatum:1295.703361):485.38006):2024.92):394.0); diff --git a/example_files/pxrmk_example/knuckle_tree.tre b/example_files/pxrmk_example/knuckle_tree.tre new file mode 100644 index 0000000..0d77589 --- /dev/null +++ b/example_files/pxrmk_example/knuckle_tree.tre @@ -0,0 +1 @@ +(((((((s1:0.3603553431,s2:0.3603553431)A:0.1)A2:0.2)A3:0.8968782862,s3:1.257233629)B:0.4207546592)B2:0.1,(((s4:0.1190332191,s5:0.1190332191)C:0.02544171746,s6:0.1444749366)D:0.7647640019,s7:0.9092389385)E:0.76874935)F:0.06349158892,((s8:0.3106889265,s9:0.3106889265)G:0.1031508249,s10:0.4138397514)H:1.327640126); diff --git a/example_files/pxrms_example/Nucleotide.fa b/example_files/pxrms_example/Nucleotide.fa new file mode 100644 index 0000000..e414f52 --- /dev/null +++ b/example_files/pxrms_example/Nucleotide.fa @@ -0,0 +1,14 @@ +>MJM1652 +ATGGGGCCGATTAAGCTGGAGCTGCGGAGTCCAAAGAATCAGCTGGGTTTGGGAATCGATCCTAACCCGGATTGGACCATCGACGGTCTGCTGTCGGATTTGAATGTGCTTCAATCCAAGTTCAGTACTTTCTCCTTGTCAAGTAAAGAGAGCCCACAATTGCGGGAAGTTTCGAATGGTCAGAGTGGAATTAGGGGGAAAAAGTCCTTTGTGATCCGGGTATCTGAAGATGATGAGATTGATGATTGGGGAGGTGAAGACGGGGAAGTGGAAGTGAGGTCTGGCCGCATCTTAGTTCCGGCTTACAGGCTAGATTGCCATGATATCAGTCTTAGTGATGATTCAGAAGACGAGTCGACACCAACACGAGCCCATGGGCCTGCTATGGAGAAAACCAAGGTCGCCGATGTCATGTGTCTTGCGCTGTATGAATATCAGCTTGGCGTTCAGGAGGAGATCAAGAACCAATTATCTTCTTTGGTGGAAGGATTTCAAACTGCAAACGATAAGTTCATCTCTTCACTGGTTCAAGTTGAGAAAAATGCTGAAAGGAGGAGGGAAATGGATAGAAATCTTGACTTGCAATATCAGCACAAGATAGCTGAGGTGCTAGATAGTCATTTGAATTCTATTCAGAGGGATCATGAACATAGGTCCCGGTTGGAAGAAAAAAGAATAAAAGATGATGCAGCTCTTGAGGACACTAGAAGAAAAGAAAAGGCTTTTCAAGAAGAAAAGTTACGTCAACAAAAGGCCAGCGCAGAAAAAGAGGCTCGAATTGAGGCTGCCAAAAGAGCGGATGATGCTAGGAAGGCTGCACTAGAAGCTGAGAGAAAAGCTTTGGTTGAAGCTGCTGAAAAGTTGGCTAAAGAAAATGCAGCCAAGGCTGCTGCTTCTGCCAAAACAGATCCTGGAAACCAAAAAGAATCTAATGTAGACGTACAAAGTTCGAGAGTGGTTGTGTCTGATGCATCAGTTTCTGAAAAACCCATAGGTAGTATTGTTAGGGCTGCTGAAAGCGCTCTAAAACTGGAAGAAAAGAGGCGACATATGTACCTGGAATTCGATGAGAGAACACGTAGTCTGAATCCCAGCTCAAATAAGGATTTTGTCAGCTACGAGAGAAAAGTTGGCAGAGTGATTAGACAAATCAGTGGGTCAGTAGAGAATGTGCGAGCAAAAGCCAATGATTTGATCGAGATTTTGAACAATAGCATATTTCCTCGGCCTGTCAGCATGCTGATGCTAGCAAAGAAGGTCATCTCAGTCTATGAAGCTCCTAATATCTCTAATTCATCCGCTTTTGCATGCGGGCATGTTGTTGTTCTTGTCAGTGCACAGGTCCCACAATTCATGGATGTTCTTGTCGCAGAATTCCATAGGGTCTGCATTTATGCTGTTCCAAAACATCTTGTTTACTCAAAGTCAACTTTTGAGGTTAAAGAAGCATACTTTAAAGCTATTGGCTACCGAGAAGAAGATGGAAAGTTTGAGGAGACGGAGCGTTATTTGGATCGTTTGGAGTCATGTATGAAGTTATATGGGGCAGTGGTCCAGACACAAATTGACGGTGTTCAAAATATGCATGGGTTAGAGGAAGGCTGGGCATGGCTTGCTAGGTTCTTGAATGCCCTTCCTGTGAACAGGAACACGGCAGTTGCACTAGTAGCATTCTTGAGCATGGCTGGATATGCACTACACAGAAAATACAAATCTCAGTTCAGGAAGCTTCTCGGTGTCATCGATAAGAATTTTCTTCACAAATTAAAATTGCTCAAGGAAGACCCAAAGGTGAATATCAAAGTTAGAGAGCTTCAGGAATACATAGAAAGCAACAAGTTCCTTATTGAGCCCGAAGGATCACATCTTCAGGGCTCTCTATTATCTCGTGCTCTCGCTCCACAAGACGACCGTCAGGAGCAAAACTATTACTCACCAAATAGGTATTTTTACTGA +>DrobinSFB +ATGAGTCCGATTCAATTACGAAGTCCAGAGAATGTACTTGGGATGAAGATTGAGCCTTGCCCTGATTGGACATTCGATGGATTGTTCTCCGAGTTGAAGGAGCTTGATTCCAAGTTCAACTCCTTCTCTTTGTTCAATAAAGATAGCTCACGGGATGCTTTATGTGAAATGAAGAGCAAGAAGGGTTTTGTAATGGGAGCGGACGGGGACAATATTGAATGGGATGAAGGAGGTGTGGAAGAGTCAGTGGACCGAGGTTTAGGGACAGCAAATCGGTTCGGTTGTCTTGATCTTTTCGTTAGTGATAGTGATGATTCAGAGGATGAATTTGTACAAGAATTCAAAGGACCTTTAATGGAGAAAACAAGAGTAGTGGAAGATGCATGCCCCATTCTATTATATGAATTTCAGCTTGGCATTCAGGAAGGAATTAGAAATCAGATTTCATCATTGGAGGCAGGATTGCAAGTTGTCAAAGAAAAATCAACCTGTGGTCTGACTCATGTCGAGGAAAACAGTGAAGAGAGGCGTAGAATGGACAGGAAGCACGACATGGAACATCAGCGTATGATTGCAGAGGCCCTTGATGAGCATTTAACTGCTATTCAGAGGGATCATGAGCAGAGGTCCCGACTGGAACAAAAAAGAATACGAGATGATGCAGCACGAGAAGAAGCTAGAAGAAAGGAGAAGGCTATGCAAGAAGAGAAGTTACTGCAAGAGAAGGCCAAGGCTGCTGAAGAGGCTCGACTTGAGGCTGCACGGAAGGCGGAGGATGCCATAAAGATTGCATTGGAAGCTGAAAGAAAAGCACTTGCAGATGCGGCAGAGAAGACAGTTAAAGAAAATTCAACTCAACCTGCTGCTTCTGTCAAAGAGGTTTATGGAAACCACGATGATCCTGCCTCTGGTGTTCAAGCTACAAGATCAAACGTACCTGCATCAGATACCCCAGGTGGCAGCGTTAGAGCTGCAGAAAGTGCTTTGAAGATGGAGGAGAAGAGATGGCATAAGTACAAGGAACTACATGAGAAAAACCTCACATTGATGTCCAGCTCAAATATGGATTTTGTCAGTTATGAGCGGAGAATCAGTCGAGTGACTAGACTAATCTTGGGTTCTGTGGAGAATGTGCGAGCAAAAGCCAATGAACTGCTCAAGATTCTCACTGATCCTGTTTGTCCGCAATCTGTCAGCATGGTAATGATTGCAAAGAAGATCATATCTTCTTATGAAGATCCTGATGCTCCTGCCTCGTCCGCTTTTGCACGTGGACATGTTGTTGGTCTTGTTAGTGGACAGGTACCACAATTTATAGATATCCTTGTGGCAGAGTTCAATAGGGTCTGTATATATACTGTCCCCAAACATGTTCTCTACTCAAAGTCAGCTTTCCGAGAGAAAGATGCTTATGCTAAAGCCATGGGCTATCGAGAAGAAGACGGGAAGATTGAGGATACAGGCAGATACTTGGGTCGCCTTGAGGCATGCATGAAACTTTATGCGGCAGTGGTCCAGACTCAAGTCAATGGTGTTCAGAATCTGCACGGGCTGGAAGAAGGCTGGGCGTGGCTGGCAAGGTTCTTGAATTACCTCCCAGCTGATGGGAACACCGCAGTTGCGCTAGCTGCCTTCTTGAGTACGGCTGGATTTGCTCTTCACAGAAAATACAAGTCCCAGTTTAGGAAGTTGCTGCATGTAATCCATCAGCATTTTCTCGTCCAACTAAAGAAACAGGAGGAGGACCCGAAGGTGAGTATAAAGGTCAGAGAACTGCAGGAGTATATAGAATCGAAAAAGTATCTAGAGGAGCCAGAAGGATGGCGTCTTCAGGGCTCGTTGTTGTCGTCGCATTCTCTCGCTCCGCAAGCAGAATATCAACCACAGTATCATTCGCCAAATAGAAGATATTTCTACTGA +>DrolusSFB +ATGAATTCTACATCAGAAGTAGCTACCATCAGCGTCCGAACTGGATCAAATATGTCTGGATCTGGTGGACTGAAAAAAGGAAGCCTAGTTAGGGCGGCTGAAAATGCTCTAAACCTGGAGCAAAGAAGACTGAAAATGTACGAGGAATTCGACGATAGAAAGAAAACATTAGTCTCAAGTTCAAATAAGGATTTTTCCAGCCATGAGCGTCAAGTTGCACTGCAGATCAAACAAATAAGTGGATCTGTTGATAATGCAAGGGCCAAAGCTAGTGAACTAGTCAGGATTTTCGGTGATCCTGCTTGTCCTCAGGCAGTGAGTATGATGACATTTGCAAAAAAGGTCATCTCTAGGTTTGGAAACCCCGACGCAAACTTGAACACGTCTGCGTTTGCATGTGGATATGTTGTTGCTCTTGTTTCAGCACAGTTACCTCATGTAATGGATCTTACTATAGCTGAATTCCACAAAGCTTGCATCTATGCTGTTCCTAAGCATATTATGTACTCAAAGTCAGCATTTGAAACCAAAGATGCTTACCTAAAAGCCATTGGCTATCAAGAAGAAGATGGAAAGATTGAGGCAAGAGACCATTATCTAATACGCCTGAGGTGCTACATGAAGTTTTATGGGGCTCTGGTCCAGACACAAATTAACGGCGTCAGGAATGTACACGGTCTGGAAGAAGGCTGGGCCTGGCTTGCGAGGTTCGTGAATACCCTCCCAGCTAACATCTATACCGCAGTTGCGCTCGAGGCATTCCTTGGAATGGCAGGATTTGCTCTTCACCGAAAATACAAGTCTCAGTTCAAGAAGTTGCTGATGGCTGTTTCACAACATTATCTAAATGCTCTGGAGGCACGAGGAGAACCTGAGCTTAACTCTGTGATCAGGAGTCTTCGACAATATGTGGAAGATAAGAAGTTTCTTGTTGAGCCGGAAGGATCGCATCTCCCTGGCTCTTTATTATCTCGATCTTTTGAGCATGATCAAGGCCACCAAGAGCAAAATTATCACAGATGA +>NepSFB +ATGCGAGTGTCGGATGATGAGATCGATGATTTTGACGGAGAGGATGGAAAAGAGAATACTGAGCTAAGCTTAGTGCGGGCAAGTCGATTCAGTTTCCATGACAGTTATCGTAGCGGGAGTGATGATTCCAAAGACGAGCCGGTGCATCAACTCTATGGCCCCGTGATAGAGAAAATGGGAGTGGTGGAAGGCACATTACTTGAGGTTACACATCAATACCGACTTGGCATCAAGGAAGAAATTAGGAATCAGATATTTGCATTGGAGACAGAATTAGTTACTGCAAACGATAAGTATGCCTCTGCACTTGCTCAAGTTGAGAAAAATGCTGAAATGAGACGGGAAATAGATAGAAAGACTGATATACAATATCAGCGCAAGATTGCTGAAGCACTTGATAATCACTTGACTGCTGTTCAGAGGGATCATGAACATAGATCCCAACTGGAAGAAAAAAGAATAAGGGATGATGCAGCTCTTGAAGAATCCAGAAGAAAAGAAAAGGCTCTCCAAGAAGAAAAATTGCGCAAACAAAAGGCTAAGGAAGAAGAAGAGGCTCGACTTGAGGCTTCTAAAAGAGCTGATGAGGCAAGAAAGCGTTCGCTAGAAGCTGAAAGAAGAGCTAATGAAGCTGCAGAAAAGATAGCTAAAGAAAATTCAATGAAGGCTGCTACTGCCACTATTGCGGAACATGAGAACCAAATAGATTCCACCTTAGGGATTCAAAACGTACAATCAGATGGCTCTGGATCTGATGGGGCAAAAAAAGTGCAGTCCCCCGTGTTAGGTAACATAGTTAGGGCTGCTGAAAGTGCTCTAAAGCTGGAGGAAAGAAGACTACTGAAGTACAAGGAATCCGATGAAAAATACCAGGCATTACTCTCCAGTTCCAATAAGGGTTTTGTTGGCTATGAGCGGCAAATTGGTCGACGGATTAAACAAATAAGTGGTTCAATTGAGAATGTACGAGTAAAAGCAAATGAACTAGTTAAGATATTCAATGATCCTCTCTGTCCTCAATCTGTCAGTATGATGATGTTTGTGAAGAAGGTGATCTCTATATATGAAAACCCGAATGCAAACTTTGACACATCTGCTTTTGCATGTGGGCGTGTCATTGTTCTTGTCAGTGCACAGGTTCCACAAGTCATGGATCTTCTTCTCGCTCAGTTCCATACAGCATGTATATATACTGTTCCTAAGCATATAATTTACTCACAGTCAGCTTTTGCAACAAAAGAATCTTATTTCAAAGCCATCGGCTACCGGGAAGAAGATGGGAAGATTGAGGACAAGGACCATTATTTGGAACGTTTGAGATCGTGCATGAAATTATATGGGGCACTGGTCCAGACTCAAGTGGAAGGTTTTCGGAATATGCACGGCTTGGAAGAAGGCTGGACTTGGCTTGCAAGGTTCTTGAATGCACTCCCGGCTAACCTATACACCGCAGAAGCACTCGATGCATTCTTGAGGATGGCAGGATTTGCTCTCCATAGAAAATACAAGTCTCAGTTCAGGAAGTTACTGAAGGCCATCGCTGGGTATTTTGTTATACCGTTGAAAGCACGAGGAGGTGAGCCGAAGTTGAATTCTGTGATCAACAGGCTTCAAGACTACATAGAAATGAAAAGGTTCCTTGTGGAACCGGAGGGATGGCGTCCTCCAGGTTCTTTACTATCTCGAGCTTCTAATCCTGACACAATCCATCAAGATGAGTATTAG +>Beta +atgcgagtggatgatgatttgatgagtgattccgacgctgaggatggaaatgaggatagaagcttggtggcagcaactcgttttgattgcaatgatatttttctcagtgaaagtgatgattcagatggcgaaagtatgcagcggttgcaagttactgtcatggatccaattggagtggtagaaggtgcattccatgagataaaacatgaataccagcttggcgtcaaggaagaaataaggaaccaacttgtcacattggagacacagttggttgctgaaaaggagaagtctgcatcggcctacgttcaagttgagaaaaatactgatgctagacggcaaatggatagaaagctggacttgcattaccagcgcaagattgctgaagctcttgataatcacttgacagctattcaaagggatcatgaacacagaactcaaatggaagaaagaagaataagagatgacgctgcacttgaagaagccaaaagaaaagagaaggcattacaagaagaaagaattcgcctacagaaggcaaaagaagaagaggctaggcaggaggctgctaaaaaagctgaagaggctgcacaggaagctgaaagattggctaaagaagctgcagataaattggtgaaggaaaaatctgggaaggatgctattcatgcaaaaacaggcccagtttcggctttaccaaatgcaccatcaacttcatctacaccaaatgattcaaagacagtcaagtcagcaggcaacttagttagggctgcagaaaatgctctgaagcttgaggcaagaaggattcagacttacaaggagttagaagataggaaccaatcaatcatctctagttctaacatggacttccgccccaaagaacgggaaatcgctaggcaaataaatcaagtaacttgttcaataagcagtgtaagatcaaaagcgaataacctagtgaatatattcaacgatcgtgcttttcctcaatctgttactgtagcaatatttgcgaagaaggtcatctcttattttgaaacatcagagcagacgaatggttcttattttgcatgttgccatgtaatcacttatgttagtgcacaggtcccagctgtcatggaatgtctccttgcagagtttcacagagcttgtatctacactgttccgaaacatataatgagctcaaagtctgcatttggaacagaagataattatttcaaagccataggctataaggaagaagacggggagctagagaaaacagataactatctgaaacggttaggatctgtgatgaaactatatggggctctagtccagactgaagctgaaggagttcaaaatatgcatggactggaagaaggttggagatggcttgcaaggttcttaaatgctatcccgccaaatgagtacactgctgttgctctcgaagctttccttggaatggcagggtttgctctccacagaaaatacaaatctcagtttaggaagatactgagcttcatatataaggagtttgtgcatacgctgcgatcccgtgaagaccctagggttagttctgtgataagaaggctccaggtttacatagaatcacaagagtttctacaagagccagacggatggcgacttcagagcactcttctatctcacacttctgttccgaatgccgagtaccagcaagagcaatataaccataatacaccaagacgttttacctatcaaagatag +>Spol +atgatcaaattggagttacgatgtccgaagaatgtaaacggaatctcaattgacccgaaccctagttggaatttcaatgatcttatgtcggagttgagctcattggagaataagctctacaataatggttctgattctccgttaaaccctaaacctttcgtcaaatcaccagctcgcgattttcgcaagattggaaggagaggaaagaatgaggtaaaggcgaaggcattcgtaatgcgagtggatgatgatgatgacaagatggatgaagatgatgacgagatggatgaatccgacggcaaagatggaactgaggctaggagcttggtgccagtgagtcgatttacttgtaatgatatttatctcagtgaaagtgatgattcagacaacgaagagatgcagcagatgcaagtttctgtcatggataaaatgggggtggtagaaggtgcattccttgagctgacgcacgaacaccagcttggcgttaaggaggaaatcaggaaccaactagcagcattggagacacagttggtggttgaaaaggagaagtctacatcagcccttgttcaagttgagaaaaacactgatgctagacggcagatggacagaaagctggacttgcattaccaacgcaagattgctgaagctcttgataatcacttaacagccattcaaagggatcatgagcacatatcacagttagaagaaagaaaaataagagatgatgctgctgttgaagaagccaaaagaaaagagaaagctttgcaagaagaaaaattgcgccaacagaaagataaggaagaacaagaggcggctaaactggaggctgctaaaaaagctgaagaggagagaaaaactgcacaggaagctgaaaaattagctaaagaagctgcagataaattggacaaggaaaaggcaccctcaaccacatcagctccaaatgtgcgattggaagtaaagtcagcaggtaagttagtcagggctacagaaaatgctctgaaacttgaggagcgaaggcttcagacttacaaggaattagaggataggaaccaacagttaatcaactctggttctcacacggactacaaccgcgtagaacgggatattaagaggacgataagtcaaataagcgggacagtagaaaacgtaagatccaaaggaactaaactagtggagatcttgaacaacccagcatgccctcagtctgttgttgtagcaatgcttgcgaagaaggttatctctatttatgaagcaccaaacacaaatttcaacagttctgcttttgcatgtggccatgttattgtttatgttagctcacaggtcccagctgtcatggactgtctccttgctgagtttcacaaagcttgcatctacactgttccgaagcatataatgtactccaaggctggttttgaaactgaagaagcttattacaaagccattggctatagagaagatgggaagttagagacaacagattgctatctagaacgattagaatctctgatgaaactatacggggctctagttcagacggatgctcgtgttcagaacaaacatggcttggaagaaggttgggcttggcttgcacggtttttaaacggtctcccacctaatagatacaccgctgttgctctcggagctttcctagaaatggccgggtttgctctacatagaaaatataagaaccagtttacgaagatactgaacgccatttcaagggagtttgtgcctacactgagagcacgagacccaaatgctggttcaaaaataactaggatcttggattacatagaatcacagaaatttcttcaggagccagttggatggcgtcttcgggaagcgttgctgtcaaatagttctattccagaaccagaacataatcaacagcaatatcatcaacagcaatatcatcaacagcaatataatcatgcaccaaacagacgttatacttaccgaaggtag +>Dimu +TCAACGCAGAGTACGGGGGTACGGCAATTACTTCTCACAATGGGTCCGATTAAATTGGAACCACGTAGCCCGAAAAATCTGCTCGGGTTGGAAATTGATCCTAACCCGGATTGGACCTTTGACGATATGCTGTCGGAGCTGAATCAGCTTGAATCGAGGTTTAGCACAGTCTCTTTGTTAAGTGAAGAGAGATCATGGTCACGAGAGATGTCTAATGTTAAGAGAGGAATGAGGGGCAAGAAGGCATTTGTGATGCGAGTGACGGAGGATGAGGTGAGTGATTGGGGCGGTGAAGATGTGAAAGTGAGGTCTGGCCTCAGCATAGTGCCGGCTTATCAGCTCGATTGTCTTGATATCTGTCTCAGTGATGATTCAGAAGACGAATTGGTACTACAAGTCCAAGGGCCTGTGCTGGAGAAAACCAAGGTGGCTGAAGCTACATGCCTTGAGCTATATGAATACGAGCTTAGCGTTCAGGAGGAAATTAGGAACCAAATATTGTCTTTGGAGGCAGGATTGCAAATTGCAAATGATAAGTTAATCTCTTCACTTATTCAAGTTGAGAAAAATGCTGAAAGGAGGCGTGAAATGGATAGAAAGCTTGACATGCAATATCAGCGCAAAATAGCTGAGGTGTTGGATAGTCATTTGACTGCTATTCAAAGGGATCATGAGCATAGGTCCCAGCTGGAAGAAAAAAAAATAAGAGATGATTCAGCCCTTGAAGCTAGAAGAAAAGAAAAGGTTTTGCAAGAAGAAAAGCTACGTCAACAAAAGGCCAAGGCTGAAGAAGAGGCTCGACTTGAGGCTGCTAAAAGAGCTGATGACGCAAGAAAGGCTGCACTAGAAGCTGAAAGCAAAGCACTTGCTGAAACTGCAGAAAATATGGCTAAAGAAAATTCAGCCAAGATTGCAGCTTCTGGCATAATGGTTCATGAAAACCAAAAAGATTCCACCTTAGGCATTCAAACTGCAAGATCAAATGTGGCTGCATCTGATACATCAGGAACAAAGCCCACAGGTAGCATTGTTAGGGCTTCCGAAAGCGCTCTAAACCTTGAAGAGAAGAGACGACATTTGTACCTGGAATTAGAAGCTAAAGCCCAGTCTTTGATGTCCAGGTCAAATAAGGATTTTGTCAGCTATGAGCGGCGAATTGGTCGAGTGATTAGACAAATTTGTTGGTCGGTAGAGAATGTGCGAGGAAAATTCAAAGAATTGATCGGGATTCTCAATGATCCCGTCTGGCCTCAGTCTGTCGGCATGCTGATACTTGCAAAGAAGGTCATCTCTGCATATGAAAATCCTAATACCCCTGATTCAACTATTTTTGCATGCGGACAGGTTGTTGTTCTTGTCAGTTCCAAGGTCCCGCAGTTCATGGATGTTCTTGTTGCGGAATTCCATAGGGTCTGTATCTATACTGTCCCAAAAGATCTTATCTACTCAAAGTCAGCTTTTGAGGTGGAAGATGATTATTTTAAAGCCATTGGCTACCGTGAAGAAGATATAAAGATAGAGGAAAAAAAAACAACAGCAGCAGCAGCAGCACAGCCACTTCCCACTAGAAAGATATGGGACACAGACAGTTATTTGGGGCGTCTGGAGTCATGCATGAAGTTGTATGGGGCGGTGGTCCAGACACAAGTTGATGGTGTCCAGAATATGCATGGGTTGGAGGAAGGGTGGGCGTGGCTTGCGAGATTCGGGAATGCCCTTTCAGCGAACATGAACACTGCAGTCGCATTAGCAGCATTTTTGCATATGGCAGGATACTCACTCCACAGAAAATACAAGTCTCAGTTCAGGAAGTTGCTTAGTGTCATCAATCAGAATTTTCTCAAGGAACTGAAAACACTGAAGGAAGATGGAGATCTAAAGGTGAAAATCAAGGTCATGGAACTTCAGCAATATATAGAAACGAAAAAGTACCTAGTGGAACCCGAAGGATCACGCCTTTTTCAAGACCCGCTAGTTTCTCATTCTGCCACTCTAGAAGAAGAGCATCATGAGCAACGGTATTATTCACCAAATAGGTACTTTTACTGA diff --git a/example_files/pxrms_example/taxa_to_delete.txt b/example_files/pxrms_example/taxa_to_delete.txt new file mode 100644 index 0000000..98e6875 --- /dev/null +++ b/example_files/pxrms_example/taxa_to_delete.txt @@ -0,0 +1,2 @@ +MJM1652 +DrobinSFB diff --git a/example_files/pxrmt_example/rmt_test.tre b/example_files/pxrmt_example/rmt_test.tre new file mode 100644 index 0000000..a5c98e4 --- /dev/null +++ b/example_files/pxrmt_example/rmt_test.tre @@ -0,0 +1 @@ +((((s1:0.3603553431,s2:0.3603553431):0.8968782862,s3:1.257233629):0.4207546592,(((s4:0.1190332191,s5:0.1190332191):0.02544171746,s6:0.1444749366):0.7647640019,s7:0.9092389385):0.76874935):0.06349158892,((s8:0.3106889265,s9:0.3106889265):0.1031508249,s10:0.4138397514):1.327640126); diff --git a/example_files/pxrmt_example/taxa_to_delete.txt b/example_files/pxrmt_example/taxa_to_delete.txt new file mode 100644 index 0000000..fa892ef --- /dev/null +++ b/example_files/pxrmt_example/taxa_to_delete.txt @@ -0,0 +1,3 @@ +s1 +s6 +s8 diff --git a/example_files/pxrr_example/out.tre b/example_files/pxrr_example/out.tre new file mode 100644 index 0000000..d89fe08 --- /dev/null +++ b/example_files/pxrr_example/out.tre @@ -0,0 +1 @@ +((s1:0.36035534310000000291,s2:0.36035534310000000291):0.44843914309999999279,(s3:1.2572336289999999082,(((s8:0.31068892650000001776,s9:0.31068892650000001776):0.10315082489999999327,s10:0.41383975140000001103):1.3911317149199999843,(((s4:0.11903321910000000394,s5:0.11903321910000000394):0.025441717459999999007,s6:0.14447493659999999238):0.76476400190000004553,s7:0.90923893850000003791):0.76874934999999999796):0.42075465919999999187):0.44843914309999999279); diff --git a/example_files/pxrr_example/rr_test.tre b/example_files/pxrr_example/rr_test.tre new file mode 100644 index 0000000..a5c98e4 --- /dev/null +++ b/example_files/pxrr_example/rr_test.tre @@ -0,0 +1 @@ +((((s1:0.3603553431,s2:0.3603553431):0.8968782862,s3:1.257233629):0.4207546592,(((s4:0.1190332191,s5:0.1190332191):0.02544171746,s6:0.1444749366):0.7647640019,s7:0.9092389385):0.76874935):0.06349158892,((s8:0.3106889265,s9:0.3106889265):0.1031508249,s10:0.4138397514):1.327640126); diff --git a/example_files/pxs2fa_pxs2phy_pxs2nex_example/Alignment b/example_files/pxs2fa_pxs2phy_pxs2nex_example/Alignment new file mode 100644 index 0000000..1a8c945 --- /dev/null +++ b/example_files/pxs2fa_pxs2phy_pxs2nex_example/Alignment @@ -0,0 +1,893 @@ +>Drosophila_setosifrons +ttaataatattcttatataaaatataattatttttatatttggtcctttcgtactaaaat +ataacaattttttaaagatagaaaccaacctggcttacaccggtttgaactcagatcatg +taagaatttaaaagtcgaacagacttaaaatttgaacagctacacccaaaattatatctt +aatccaacatcgaggtcgcaatcttttttatcgatatgaactctccaaaaaaattacgct +gttatccctaaagtaacttaaatttttaatcactacaaatggatcaattattcataaatt +aatggttttttaaattaaaagtttattaaattttaatatcaccccaataaaatattttaa +tttattataataaaaataatctttataactaaaataaacaaaatataaagatttataggg +tcttctcgtcttttaaacttattttagctttttgactaaaaaataaaattctataaaaaa +tttaaatgaaacaagctgaagacagttgatctgcttatcaatggcgctggtatcctggac +gataatcagattgagcgcaccattgcggtaaattttacaggtacagtgaacaccacaact +gcgatcatggatttctgggacaagcgtaagggcggcccaggtggtgttgttgccaacatc +tgctcagtaactggcttcaactccatctatcaggtgcccgtttactctgcctcaaaggcg +gctgccctaagcttcaccatgtccattgcggtaagtaaatatataaatatataaatactt +tatcaggtggcagcctatttaatcttaacagaaattggcgcatattactggcgttacggc +atattccatcaatccgggcattaccaatactgttctggtgcataaattcaactcctggct +gaatgtcgaaccacgcgttgccgagcttctccttgagcatcccacacagacaacattgca +gtgcgcacagaactttgtgaaggccattgaggccaaccagaaatgtcaacatgagctaac +ctaggccttcaaratagagcttctcccttaatagaacaactaattttttttcatgatcac +gctttattaattttagtaataatcactgtattagttggctacttaatatttatattattt +ttcaataaatatattaaccgatttcttcttcatggacaattaattgaaataatttgaaca +attctacctgcaattatcttattatttattgcccttccttctttgcgtcttctttatctt +cttgatgaaattaatgaaccttcagtaactttaaaaagaattggacatcaatgatattga +agttatgaatattcagattttaataacattgaatttgactcatacataatccccacaaat +gaattaacaaatgatggattccgtcttttagacgttgataatcgaattattttacccata +aactctcaaatccgaattctagtaacagccgctgatgtaattcattyttgaactattccc +gctttaggggtaaaagttgatggaantcctggccgattaaaccaaantaatttttttatc +aaccgaccaggtttattttacggacaatgttcagaaatttgtggagstaaccacagtttt +atacctattgtaattgaaagagtccctgttaactattttattaaatgaatttytaaaagr +gtaaattytt--cccgccctggttgaggctagccaagaatgctgatatactcatttttgt +ggtgccgcatcagttcataccaaatttctgtaagcaattgttgggtaagatcaagcccaa +cgccattgccatatcactgatcaagggcttcgataaggccgagggtggaggcattgatct +aatttcgcacattatcacccgccatctgaaggtaagcctatacgcaaaggtgactcttgg +caatcttgattaaacatatamtatctactatcagataccatgcgctgtgctgatgggcgc +taatctggccaatgaagtggccgagggcaacttttgcgagacaacaatcggctgcacgga +caaaaaaaaagccaaggtgctgcgcgatctcttccaggctaatcacttccgtgttgtcgt +tgtggacgatgccgatgccgttgaagtttgcggtgccctgaagaacatcgtcgcctgtgg +tgcgggctttgtcgatggtctcaaactgggcgacaataccaaggcagcggtcattcgact +cggccttatggaaatgattcgattcgtcgatgtcttctacccgggcagcaaattgtccac +gttctttgagagctgcggcgttgccgatcttatcacgacgtgctatggttcgtgtcgaac +aatacatttaaaattcaat---------tatattaaaacactttttcaattc----atat +gaaatctttcacacaggcggtcgcaatcgtcgtgtatctgaggcttttgtcacatcgggc +aaaactattgaggaactggagaaggaaatgctcaatggtcagaaattgcaaggcccaccc +acggcagaggaagtcaactacatgttgaaaaacaaaggcttggaggacaagtatgcttag +actaaacatttcagtcctaattaattttcaatattaaccaaatatcaactttctttcaga +ttccccctatttactgccatacacaaaatttgcacaaatcagcttaagcctaaagattta +atcga +>Drosophila_adunca +ttaataatattcttattaaaaatataattatttaaatatttggtcctttcgtactaaaat +attttaattttttaaagatagaaaccaacctggcttacgccggtttgaactcagatcatg +taagaatttaaaagtcgaacagacttaaaatttgaacggctacacccaaaattatatctt +aatccaacatcgaggtcgcaatcttttttatcgatatgaactctccaaaaaaattacgct +gttatccctaaagtaacttaaatttttaatcattattaatggatcaataattcataaatt +aatggttttaaaaattaaaagttttttaaattttaatatcaccccaataaaatattttaa +tttattataataaaaataatctgtataattaaaataaacaaaatataaagattnataggg +tcttctcgtctagtaaatgtattttagcttgtggactacaaaataaaattgtataaaaaa +tttaaatgaaacaagctgaagacagttgatctgctcatcaatggcgctggtatcctggac +gataatcagattgagcgcaccattgcggtgaatttcacaggtactgtgaacaccactact +gcgatcatggatttctgggacaagcgtaagggcggtccaggtggtgttcttgccaacatc +tgctcagtaactggcttcaactccatctatcaggtacccgtttactctgcatcaaaggcg +gctgccctaagcttcaccagttccctctcggtaagtaaatatataaatrtat--atactt +cagaaggtgacaatctattgattcttaacagagattggcccatattactggcgttacggt +atattccatcaatccgggcattaccaaaaccactctggtgcacaaatttaactcttggct +gaatgttgagccacgggttgcggagctactccttgagtttcccacacagacaacggagca +gtgcgcacagaactttgtgaaggccattgaggccaaccagaaatgtcaacatgagctaac +ctaggtcttcaagatagagcttcacctttaatagaacaactaattttttttcacgatcat +gctttattaattttagttataattactgttttagtagggtatttaatatttatattattt +tttaatacatatattaaccgatttttactccacggacaattaattgaaataatttgaact +attttacctgcaattattttattatttattgctcttccttctttacgtcttttatacctt +ttagatgaaattaacgaaccttcagtaactttaaaaagaattggacaccaatgatattga +agttatgaatattcagattttaataatggtgaatttgattcttatataattcctactaat +gaacttgccaatgatggatttcgattattagacgttgataaccgaattgtcttaccaata +aattcacaaattcgaattttagttacagccgcagatgtaattcattcatgaacaattcct +gctttaggagtaaaagtagatggaactcctggtcgattaaatcaaactaatttttttatc +aaccggccaggtttattttatggacaatgttcagaaatttgtggtgctaaccatagtttt +atacctattgtaattgaaagtgtacctgtaaattattttattaaatgaatttctaacaga +gtaaattcttt-------------gaggctagccaagaatgccgatatactcatttttgt +ggtgccgcatcagtttataccaaatttctgtaagcaattgttgggcaagatcaagcccaa +cgccattgccatatcactgatcaagggcttcgataaggccgagggtggcggcattgatct +aatttcgcacattatcacccgccacctgaaggtaagcctatacgcaaacatgactcttgg +cactcttgattaatcctatactatctacaatcagataccatgcgctgtgctgatgggcgc +caatctggcgaatgaggtggctgagggcaacttttgcgagacaacaatcggctgcacgga +caaaaaatatggcaaggtgctgcgcgatctcttccaggctaatcatttccgtgtagtagt +tgtgggggatgccgatgccgttgaagtttgcggtgccctgaagaacatcgttgcctgtgg +tgcgggctttgtcgatggtctcaaactgggcgacaataccaaggcggcggtcattcgtct +cggccttatggaaatgattcgcttcgtcgatgtcttctatccgggcagcaaattgtccac +gttctttgagagctgcggtgttgccgatcttatcacgacgtgctatggttcgtgtcgaac +aatacatttgaaattcaat---------tatattaaaatacattttcaattc----attt +aaaacctttcacacaggcggtcgcaatcgtcgtgtctctgaggcttttgtcacatctggc +aaaactattgaggaactggagaaggaaatgctcaatggtcagaaattgcagggcccaccc +acggcagaggaggtcaactacatgttgaaaaacaaaggcttggaggacaagtatgcttag +gctaaacatttcatgcccaattaatttattatattaacctaatgcc---tttctttcaga +ttccccctgtttactgccatacacaaaatttgcacaaatcagcttaagcct--------- +----- +>Drosophila_oahuensis +ttaatgaaattcttgctaaaaatatgattattttaatatttggtcctttcgtactaaaat +attataattttttaaagatagaaaccaacctggcttacgccggtctgaactcagatcatg +taagaatttaaaagtcgaacagacttaaaatttgaacggctacacccaaaattatatctt +aatccaacatcgaggtcgcaatcttttttatcgatatgaactctccaaaaaaattacgct +gttatccctaaagtaacttaaatttttaatcattattaatggatcaattgttcataaatt +aatggttttaaaaattaaaagttttttaaattttaatatcaccccaataaaatattttaa +cttattataacaaaaataatctttataattaaaataaataaaatataaagatttataggg +tcttctcgtcttttaaatttattttagctttttgactaaaaaataaaattctataaaaaa +tttaaatgaaacaagctgaagacagttgatctgctcatcaatggcgctggtatcctggac +gataatcagatggagcgcaccattgcggtgaattttacaggtacagtgaacaccacaact +gcgatcatggatttctgggacaagcgtaagggcggcccaggtggtgttcttgccaacatc +tgctcagtaactggcttcaacgccatctatcaggtgcccgtttactctgcctcaaaggcg +gctgccctaagcttcaccacttcccttgcggtaagtaaatatataaatatatttatactt +catcaggtggcaaccaattgaatgttaacagaaattggcgcatattactggtgttacggc +atattccatcaatccgggcattaccgatactgttctggtgcataaattcaactcctggct +gagtgttgagccacgcgttgccgagctactccttgagcattccacacagacatcattgca +gtgcgcacataactttgtgaaagccattgaggccaaccagaaatgtcaacatgagctaac +ctaggccttcaagatagagcttcacctttaatagaacaacttatttttttccatgatcac +gctttattaattttagtaataattacagtcttagtcggatacttaatatttatactattt +tttaatagttatattaaccgatttctactccatggtcaattaattgaaataatttgaaca +attttacctgcaattattttattatttattgctctcccctctttacgacttctctacctt +ttagatgaaattaatgaaccttccgtaactttaaaaagaatcggtcaccaatgatattga +agttatgaatattcagattttaataacgttgaatttgattcttacataatccctacaaat +gaattaacaaatgacggatttcgacttttagatgttgacaaccgaattattttacctata +aactcacaaattcgaattttagtyacagccgcggatgtaattcattyttgaacaattccc +gctttaggagtaaaagttgacggaaccccgggtygtttaaaccaaamtaatttttttaty +aaccgaccaggsttattttatggacaatgttcagaaatttgcggagctaaccatagcttt +atacctattgtaattgaaagtgtacctgtaaattattttattaaatgaatttttagtaga +gtaaattt----------ttggttgaggctagccaagaatgccgatatactcatttttgt +ggtgccgcatcagttcataccaaatttctgtaagcaattgttaggcaagatcaagcccag +cgccattgccatatcactgatcaagggcttcgataaggccgagggtggaggcattgatct +aatttcacacattatcacccgccatctgaaggtaagtctatacgcaaaggtgactctttg +ctatcttgtttaaacctgtactatctactatcagataccatgcgctgtgctgatgggcgc +caatctggccaatgaggtggccgaaggcaacttttgcgagacaacaatcggctgcgcaga +caaaaaatatggcaaggtgctgcgcgatctcttccaggcaaatcatttccgtgtagtcgt +tgtgggggatgccgatgccgttgaagtttgcggtgccctgaagaacatcgtcgcctgcgg +tgcgggctttgtcgatggtctcaaactgggcgacaataccaaggcagcggtcattcgtct +cggccttatggaaatgattcgattcgtcgatgtcttctatccgggcagcaaattgtccac +gttctttgagagctgcggcgttgccgatcttatcacgacgtgctatggttcgtgtcgaac +aatacatttgaaattcaat---------tatattaaaacactttttcaattc----atat +gaaacctttcaaacaggcggtcgcaatcgtcgtgtatctgaggcttttgtcacatctggc +aaaactattgaggaactggagaaggaaatgctcaatggtcagaaattgcagggcccaccc +acggcagaggaggtcaactacatgttgaaaaacaaaggcttggaggacaagtatgcttgg +gctaaacatttcaggcctaatttatttattatattaaccaaatatcaaccttctttcaga +ttccccctatttactgccatacacaaaatttgcacaaatc-------------------- +----- +>Drosophila_picticornis +ttaataatattcttatttaaaatataattattttaacatttggtcctttcgtactaaaat +gttataattttttaaagatagaaaccaacctggcttacgccggtttgaactcagatcatg +taagaatttaaaagtcgaacagacttaaaatttgaacggctacacccaaaattatatctt +aatccaacatcgaggtcgcaatcttttttatcgatatgaactctccaaaaaaattacgct +gttatccctaaagtaacttaaatttttaatcgttattaacggatcaattattcataaatc +aatgattttaaaaattaaaagttttttaaattttaatatcaccccaataaaatattttaa +tttattataacagaaataatctttataattaaaataaataaaatataaagatttataggg +tcttctcgtcttttaaatttattttagctttttgactaaaaaataaaattctacaataaa +tttaaatgaaacaagctgaagacagttgatctcctcatcaatggcgctggtatcctggat +gatcatcagattgagcgcaccattgcggtgaactttgcaggtacagtgaacaccacaaca +gcgatcttggatttctgggacaagcgtaagggcggcccaggtggtgttgttgccaacatc +tgctccgtaactggctttaactccatctatcaggtgcccgtttactctgcctcaaaggcg +gctgccctaagcttcaccatgtccattgcggtaagtaaatatataaatatatttatactt +catcaagtggcaaccaattgaatcttaacagaaattggcgcatattactggcgttacggc +atactccatcaatccgggcattaccaaaactattctggtgcataaattcaactcctggct +aaatgttgagccacgcgttgccgagcttctccttgagcatcccacacagacaacactgca +gtgcgcacagaactttgtgaaggccattgaggccaaccagaaatgtcaacatgagctaat +ttaggtcttcaagatagagcttcacctttaatagaacaattaattttttttcatgatcat +gctttattaattttagttataattactgttttagtcggatacttaatatttatattattt +tttaataactatattaatcggtttcttcttcatgggcaattaattgaaataatttgaaca +atcttgcccgcaattattttgttatttatcgctctcccttccttacgtcttctttatctt +ttagatgaaattaacgaaccttcagtaactctaaaaagaattggacatcaatgatattga +agttatgaatattctgattttaacgatattgaatttgattcttatataattcctacgaat +gaattaacaaatgacggatttcgtcttttagatgttgataaccgaattattttaccgata +aattctcaaattcgaattttagtgacagcagcagatgtaatccattcttgaacaatcccc +gctttaggggtaaaagtagatggaacccctggtcgactaaatcaaaccaatttttttata +aaccgacctggtttattytacggccaatgttcagaaatctgtggagctaaccatagtttt +atacctattgtaattgaaagtgttcctgtaaattattttatcaaatgaatttytaaccaa 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+acggcagaggaggtcaactacatgttgaaaaacaaaggcttggaggacaagtatgcatgg +gctaaacatttcaggcctaacttatttattatattaaccaaatatcaaccttctttcaga +ttccccct---------------------------------------------------- +----- diff --git a/example_files/pxseqgen_example/goo.fa b/example_files/pxseqgen_example/goo.fa new file mode 100644 index 0000000..25dd2ac --- /dev/null +++ b/example_files/pxseqgen_example/goo.fa @@ -0,0 +1,14 @@ +>s10 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+CYQGKYRYAQILHRETMIPLFWLCTRSGDAWWGCQEVACKQSAYNRIHNMHFAHNRRKHWKAKNIVLPCKEARFYNSVYEHSMMHQENPYDYEIQWLHEDVMQAWHQWNHVLHYQIHSSSPMPMSNAMNWEWDAIFLIFKHCPICKPTRPEEGLPGYETNDWIQSYTLNKPNECCATTDYIEGSNHNVGQKNGLDNSQKEWMGKFASKMQCCAATQQGRPMDSAAIVYQIGQGQLCPFDKPLHLPTEMDIDNHSSEQVYWIQLGCWDAIKFKGCLERVEAETIHSKDHMKAVGRDDEWCMFGDIKHDQYVMFHVEYNRYATYCYHFTNLSNATKKVCIKYDQTRQHTWSKAAHGNCFRGGNVENVPKNITVVGLYWNMARSPNDYLNLLWHPKNIHKTENNRWFNTNSFVHGFINVTTARLAIACAPTDLGKKCNFCKRWVSQYCEEMEYVKRYFVAYFCPHELVEPHVDMWSNRECCEFSEHWQVHWYDLAKIRDGQFLWCLNWKPTTPEQYYDQMVIDAYFAITSCKCMYQYVNMWYCAKPYRRRLHGQYESKQNYLQTMHYIGSQDVIQRTMRCFIVMKNILEANDYKMHCCYFWQHDWAFDKWHYSFEWEDLIWYICYRFDYLVTCIWLMHWDRTGMRAHNQYQHWREFVAAWKGLSACVEAYMIQGGMCDAFTLGCRQIINNVQFHDTYVDLLLMCHFHLELLDLRTTYQESEWIYNSVDGKAKSVAFTQNENCIYPHCRDYFREQYPEDKIAGPAPRAASWFIVCAFRQQNVGMPDESCNNYKQEHFWCDAWTRVWRQTQKTTSRTGNCWGPHQSAALGECAICVGMVHPIKRIGGWTWESHSDSVKSHHYLFEHNQKAINVDKHCVCGHKFNEWFTALQPHSTVNEFFVWRVQYGELGPVAKYKCALQVSLVCPHVLDFWILQCIAAFDLRQKTCTMSQWCIMNYQFRYFCCQCHPIKRVDRLYTQLRKGTIMMYFCFNSAESKVRPMSCTSG +>s8 +MKQLVWFYAVIGDHATNICMFWICTEGSDYTQGPQEVKSFQRAPNRKHDMHLANNRRYIWPAVCIVWICKEHRVYNSEDKFSMMDQCFPPDYEIQRLYKDVMQAWHDWTHCLHIGIHSNSPMGMSVLMNCGKDADFEDFKYCIIVRATRPEEGVSGYETWQGIQAYTMMIPRECCETTDYISGTNHNVGQKNGLDNQLREWMRKFVSKCQCRAATCQGRRMDRSEIVPQNQVGQHCWFDKMKQCTNEMDIRNGSYEQLYWSQWLCTNAIKFDGCDEYVEGGTIIVKDHNKCVGRPDSWCMFSDIFNDDRVNWDWIQNRYATYIYQFFGFIDAQVKVNIIWDQTTQHTKSKAVIDNCFRGVNVENILCNINVVFLYWQMMRSPNDCMNLDWELKNRFKYIVNRWFNTNDFRHHMINVTVATLAPAVAKILLGMKCNFIKRWGSKYDETCGYVKIYMWGKFNPFELVSPHVDFWAKWECQLCQEAWARVWNDWHPIEDGVYECGLMWKFQTPEQKYNQMLILCVFNLFQCKIKMQGEWMWYCAKMPRRRLHKRYESKQPWLYTMHYIGKEYIIDRTSVCGIKTMNPWENNDYDNHECLFVQHDLAIMKWPYEFEGELQIWYHCGDTRYLTECIMLPFWDCWGMRADHFYQEWHCFVAAWQAKSACPENEASQMGNPDAFSRGNRAPPNNVTFHQKCDWELDMWVFTDYLRSLRVIFQKSCWTYNSRDKKHSSNDFTQRKKKWAPPTYDYVFEQYQEDRIQAKAVLAAIWMIGCAFFQKNVGMAPESPLPYSGTCFWCDANGISWRQTGKRTAKTGCCKPQHQSAPLGRCAYCVGQVLPITRIGTYTNESIVDSTIVHHMMFNHNFKAIVFKKHCMCGQKFEETSTQLNPYSHVMFFFPERGCDCELGPVLRGKCAGQVILDYPKVLDFWCEQCIHAVAPRQKTMTEIQWCIMNYQFEYCCLQPHEIKRGDPLITQQLKKTIDLYFCNNSAESNPSKKGWSSG +>s7 +PAHNKPHSECNMVPCSTDKRLVHFMAKQFEANDFKKLEGNFLRQNFDAQVGHQRFEMDGDYVAWNNMQKSPAEFKWQTNRCAQMFARKDEDVHDLVIVCACLCFFYPMEVRDCHFCMKVDGRGGRCNWAAQIEFECSMCHKAIAFIMLHMNDFTNWTLVCCCLLWQFRFVGDYRAQANCDDSVSQFDPSNAVVMDCQRQYAVSCWQMMSYRGDKMQKWSHWPEFNCKCWQQCGQHAPIWHTQLEHPGNGANTQKKWKFYLMVKRHPSDKQIQEDAPQMVKGQAFSYPTSVDYEENAMGMLINYAHYVDTGLQGPHFNTCQFQMFGDNWVYVDGVNRAYEYTFWEREMTQPCTNADAIQDGDVDWAYGNSWNISCKLNNYHEADPEGTLCTAMCWTQLPMWEFKSNDRSAVGDEPYVKWQWYAISTGFTHWLPKVQRVQDFVCRETWHGLLWAPWHVNYGTTDDMQKEPTPYMFPHNDRTFYGVWHMPHSYCCFTFMFLEWNCTLTTQASKEAGHENAIMMVAHSFACECFHRMGHKCKFDFYADNPIETLFPGQETNWWGSHTLPTNQFYREDSSDCAQMRKHAHNVPLQHSNSTATCHALLLWDFKGGFKKKMCAHVVDLGIPEYHGIVMLIHDVDHTIEMIWGEFQCQRELYKAWYWTYICSCIIHETYNFMQTLIKCIDDRPNNNNVFEHNPFDGYYFCMDKVFNWTKCVVQAWNITRESRLKEVAMPHRTSNNGETSNPHPSLPMDKHPMPCMTFRWDDTGKRHCHGYSRQGSDNFNGTIQANEIIVHTTRQDPEGWNWEKTSGFEFAFASSFELSHTYMRAPHKFMIEYRLNKVIHIHIPSQKAVLNCFRGKHMFVNFYHILVMFQSSYRISATQCSQGCILMEETEFTKCREEQPIMCLFLQGNKSWIYLSHHTYQKDDGCKQRVGRSCDPCQICEYEFQYHEYFAPDLKYVMVWDEAMVIVEGGNHKNVSICLFMTYNSSYWRIYHESQARWH +>s6 +RAWVKPIKFVNMFQQATPYIKCMVVPWQHQCVDFWNEGAKHQKQNWWHTYCNDLEIMFFDHVLIQNPQSKTTFFSNYFNVFAQCDMREFMDPPDLVIVGMDLNHFDAFWAVDIPPMRIKSRKCGPKCCQQPSDLPWCCRLENITMPVLHMNIFLCWDLEPCPVHWWWAIEATPPSQEPCEDYFDHGHNTESLHMDVERISTVNPFTSVAARGRMRQPHIRWPRMNVEIQPSYCQHYQLPVTWVLKSCNDKRAIDYRDKEAMVHVEIIDDAWGPDCPMIHQFWAHRINYMAKAICREIPITCECAHFVNDSIDMKGDDCYSFAAAGDTSVLHDMVDTARAFHFKGPECPIFGVEYDWIAAPQDFMRYLMPDTMISHQNNVLVHWTCHTESTAMCYMQLFETFFGCNLLTGEYEELLLKWAWYRIITVFAVDDYRKKCVIDASPRHGFHITFVDTFAVHAGPPDDHVMHDTTSMLRWQYAQSKGCIHHRFTNIGFFRMVRIMNGPEATHAKTMIQINYAMRPEDYDNNYTRGWSNGCCIDWNAPNAQIHSTLEPDHHQKWIGTGKYFAWQGHCSDSGWTNSPHLHSDETAQIHDNKCMNESQEPQWKHHSMVKFWMDDYEVDAAMMSYAQWRWHENTGIWYLHRAYKEPYTQRWLSCILYATMTYYKIWTETCPCSYMTRGVFTHRQWNYNALFALNMTYYPAPSNHHNWVEWWARGADLAHQYNTQRDAEMSVVWSNNKEISFVGCSLPETQLHIPCGYFRWQLQGCTMTIGQMVQFRVGKQHVWNKMSKHEMRVVSHTYPMGWMHEDGVLHRVTDEYEEDHFIQMGMHTCNIDCDMNKDIDYHCEQISAWSNTIQHGAMMWVFCHFLVCNHKSFRTLAEEQSWVCDQPEIYWHWICWQFQPFMCGPKTNMRDSILHCNHTAHQDDSIQQVAFRYLDIWYATEVLNPYSQCKGPFLPLFFQEKEREPTVSKSHLYCRVNAEEWEMFWRYHQITHQEPNDGC +>s5 +LAWVKPIAFVNMFQQATQYIKFMPVPWQHECVGFWNEGAKHQKQNWKHTYANVLGIMFLDHVLIDNWQSKTTFFLRYFNVFAHMDTREFMDPPDLVIVCMDLTHFDAFWAVDIPPMRINSRKYGPKCCQAPSDLPICYILENIKMPVLMMNIFLCWDLEPTPAHWWRAHEATPPSQEPCEDYFDHGGSCESLHMDVEPISAWNPFTRVAARGRMRQPHIRWPRMNCEMQPSYCQHYQLPVTTVLKSCNDKRAIPKRDDHAMVYRKIIDDAWGWDCPMIHQFWAHRINYMAKAICREIPITCERAHFVFDMIDMQGDDNYSFALASDTSVLHDMGDTQAAFHCKSNECNQFGVEYDWIAYPQDFMRYLNPDTMRSYQNNVLKHWTCHTASTAMCYMQLTETPFGCNLLFGEYEELYCKWAWRRIITDFAVSDPWKKCVIDASPMHHFHALFVDTFMVHAGPPDDHVMHDTGSMLRWTYAEVKGCIHHDFKVVGFFRMVRHWNGPGATDAKTMIQHNYAMHREQYDNNPTRGWSNGCCFDWNAPPHQIKSWEEPDHHQNWIGTGKYKRWQKHCSISVWTDSPHLHSDETAQIHANSCMNESQEPQWKHHSMVKEYSCAYELDNAMWLYARWRWWENTGIDYLHRAYKEQFTQRTLYCILYATMTEYTIWTEKHEASYMTRGRFFNRQWNLIMLFALNMNYYPAPHIHNNWEEWWARGADLEHQRNILCDAEMSVVPSNNKRISFVHCSQPETQLHIPCGYFRWELQGCHMTIGQSVQLRVGKQSVWNKMTRHEMRVVSHTWPLGWLHEDGVDHRVTDEGEEDHFRWMGMHTCMIDCDMNKDITYHCEAISHWGNTICHEHYMWVMCHILVKNHNSFRTLAEEFSGVCDQPRIYMHSICPQFQPGMCGPKTDLRISILHFNHTSKGDDEEQQMAFRYMDIWYEKEMLDPYSPSKGPFLPLFFQEKEREQTVTKSHLICWVPAEEWEMFWRYHQDTHQEPADMQ +>s4 +LSWGKIILFVNCFQQAYQCIKFMVVDWQCECVGFWFEGAKHQKQNVKKTRWNDLGIYFFDHVNIDNSQSKTTFFLNYFNVFAQCDTREFMCMRDLVIVCMDLTKFRAFWAVDRPPMRIKSRKFLWKCCQHPSDLPICYILENIKMPVLFMNIFLCNDLGPTPAHWWWAHEATPPSQEPREDYFDHGHSCESLHMDVERESAVNPWTIVAARGRMRQTHIRWPRMNCEMQPSYCQHYQLPVTTVLKSCNDKRAIGYRDDHAMVHSKIIDDALGWDCPMIHQFWAPNINPMAKAICREIPITCERKHFQFDSIDMQGDTNYSFVNPLDTSVLHDMVDTARAFHFKSNECNQFGVHGDWYAYPQDFMRALQPKTMISYQNNVLVHWTCHTESTAMCYMQLFSHSFGCNLLTGEYEELYLKWAWYRIITVFAVSDPPKKCWIDASPRVHFHAPFVDTFMVVAGPPDDHVMHITTSMLRWTTAESKGCIHHRFTVVGFFFMVRHMNGPGATHASTMIQINYAMMREQYTNNPLRGWSNGCCIDWNAPPAQIHSTGEPDAHQNWIGTGKYKRWFGHCSISGWTDSPHLHFDTTAQIHDNSCMNESQNPQWKHHIMVKEIMCAAEEDNAWTLYARWRWHEVTGIWYLHRAYKEQFTQRWLYCCLYATMEQYKIWTTTHPASYPTRGRFVHRQKNLNKLVRLNMTYYPAPHNHVNWVEWWARGADLEHQYNMLCDAYMSVVPSNNKRISFVHCSLPETQLHIPCGYFRWMLQGCTMTIGQMVGLRVGKQSVWNPFFRHEFRVVSHKYIMGWLHEDGVDHRVTDEYEEDHKRQMGKHTCMIDSDMNKDIKYHCEAISAWNNTIQHEHVMWVMCHFLVKRHPSTRLLAHEQSWVCDQPEIYWHRHCPQFQPGMCGPKTNFRISILHFNHTSTGDDEIQQMAFRYMDIWYFKEMLDPYMQSIGPFHPLFFQEKEREQTVNCSHLYCVDPAEEWEMFDFVHQITCQEPADKC diff --git a/example_files/pxseqgen_example/seqgen_test.tre b/example_files/pxseqgen_example/seqgen_test.tre new file mode 100644 index 0000000..a5c98e4 --- /dev/null +++ b/example_files/pxseqgen_example/seqgen_test.tre @@ -0,0 +1 @@ +((((s1:0.3603553431,s2:0.3603553431):0.8968782862,s3:1.257233629):0.4207546592,(((s4:0.1190332191,s5:0.1190332191):0.02544171746,s6:0.1444749366):0.7647640019,s7:0.9092389385):0.76874935):0.06349158892,((s8:0.3106889265,s9:0.3106889265):0.1031508249,s10:0.4138397514):1.327640126); diff --git a/example_files/pxssort_example/Codon.fa b/example_files/pxssort_example/Codon.fa new file mode 100644 index 0000000..8e63b51 --- /dev/null +++ b/example_files/pxssort_example/Codon.fa @@ -0,0 +1,8 @@ +>Sequence3 +AAATTTAAATTTAAA +>Sequence1 +ATGAAAAAAATATAT +>Sequence2 +ATGAAATTTAATATA +>Sequence4 +AAATTTAAATTTATA diff --git a/example_files/pxsstat_example/Bollback_2002_MBE.fa b/example_files/pxsstat_example/Bollback_2002_MBE.fa new file mode 100644 index 0000000..dc9b43c --- /dev/null +++ b/example_files/pxsstat_example/Bollback_2002_MBE.fa @@ -0,0 +1,8 @@ +>Seq1 +AAATCCAGGG +>Seq2 +AAACCCAACA +>Seq3 +AATCGGTTCA +>Seq4 +AATCGGTATT \ No newline at end of file diff --git a/example_files/pxstrec_example/config_stmap b/example_files/pxstrec_example/config_stmap new file mode 100644 index 0000000..e984ebd --- /dev/null +++ b/example_files/pxstrec_example/config_stmap @@ -0,0 +1,16 @@ +#treefile = test.tre +#datafile = test.data.narrow +#mrca = ROOT taxon_4 taxon_12 +#mrca = 9_10 taxon_9 taxon_10 +mrca = 9_4 taxon_9 taxon_4 +#mrca = 9_10 Homo_sapiens Pan +#mrca = 9_4 Homo_sapiens M_sylvanus +#mrca = 9_3 Homo_sapiens Pongo +stochtime = 9_4 +stochnumber_any = 9_4 +stochnumber = 9_4 +ancstates = _all_ +#outanc = test.tre.anc +#outstnum_any = test.tre.nus +#freeparams = _all_ +#datawide diff --git a/example_files/pxstrec_example/out b/example_files/pxstrec_example/out new file mode 100644 index 0000000..d0b8219 --- /dev/null +++ b/example_files/pxstrec_example/out @@ -0,0 +1,3 @@ +site tree MRCA lnL state_1->state_2 state_1->state_3 state_1->state_4 state_2->state_1 state_2->state_3 state_2->state_4 state_3->state_1 state_3->state_2 state_3->state_4 state_4->state_1 state_4->state_2 state_4->state_3 +1 1 9_4 8.92926 0.00392321 0.0198193 0.00163309 0.00906146 0.0198193 0.00163309 0.00906146 0.00392321 0.00163309 0.0613668 0.0267469 0.133849 +2 1 9_4 10.751 0.0121848 0.0266076 0.00490472 0.0168515 0.0266076 0.00490472 0.0168515 0.0121848 0.00490472 0.0576263 0.0417819 0.0907509 diff --git a/example_files/pxstrec_example/test.data.narrow b/example_files/pxstrec_example/test.data.narrow new file mode 100644 index 0000000..5257042 --- /dev/null +++ b/example_files/pxstrec_example/test.data.narrow @@ -0,0 +1,11 @@ +10 2 +taxon_4 0 0 +taxon_5 0 0 +taxon_6 0 0 +taxon_3 1 1 +taxon_7 2 1 +taxon_8 2 2 +taxon_9 2 2 +taxon_10 2 2 +taxon_11 3 3 +taxon_12 3 3 diff --git a/example_files/pxstrec_example/test.tre b/example_files/pxstrec_example/test.tre new file mode 100644 index 0000000..5c87412 --- /dev/null +++ b/example_files/pxstrec_example/test.tre @@ -0,0 +1 @@ +(((((taxon_4:1,taxon_5:1)45:1,taxon_6:2)456:1,taxon_3:3)4563:1,((taxon_7:2,taxon_8:2)78:1,(taxon_9:2,taxon_10:2)910:1)78910:1)456378910:1,(taxon_11:3,taxon_12:3)1112:2)root; diff --git a/example_files/pxsw_example/Alignment.fa b/example_files/pxsw_example/Alignment.fa new file mode 100644 index 0000000..b2938f0 --- /dev/null +++ b/example_files/pxsw_example/Alignment.fa @@ -0,0 +1,38 @@ +>Drosophila_setosifrons +TTAATAATATTCTTATATAAAATATAATTATTTTTATATTTGGTCCTTTCGTACTAAAATATAACAATTTTTTAAAGATAGAAACCAACCTGGCTTACACCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACAGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTACAAATGGATCAATTATTCATAAATTAATGGTTTTTTAAATTAAAAGTTTATTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAACTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAACTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTTATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTAAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCATGTCCATTGCGGTAAGTAAATATATAAATATATAAATACTTTATCAGGTGGCAGCCTATTTAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAATGTCGAACCACGCGTTGCCGAGCTTCTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGCCTTCAARATAGAGCTTCTCCCTTAATAGAACAACTAATTTTTTTTCATGATCACGCTTTATTAATTTTAGTAATAATCACTGTATTAGTTGGCTACTTAATATTTATATTATTTTTCAATAAATATATTAACCGATTTCTTCTTCATGGACAATTAATTGAAATAATTTGAACAATTCTACCTGCAATTATCTTATTATTTATTGCCCTTCCTTCTTTGCGTCTTCTTTATCTTCTTGATGAAATTAATGAACCTTCAGTAACTTTAAAAAGAATTGGACATCAATGATATTGAAGTTATGAATATTCAGATTTTAATAACATTGAATTTGACTCATACATAATCCCCACAAATGAATTAACAAATGATGGATTCCGTCTTTTAGACGTTGATAATCGAATTATTTTACCCATAAACTCTCAAATCCGAATTCTAGTAACAGCCGCTGATGTAATTCATTYTTGAACTATTCCCGCTTTAGGGGTAAAAGTTGATGGAANTCCTGGCCGATTAAACCAAANTAATTTTTTTATCAACCGACCAGGTTTATTTTACGGACAATGTTCAGAAATTTGTGGAGSTAACCACAGTTTTATACCTATTGTAATTGAAAGAGTCCCTGTTAACTATTTTATTAAATGAATTTYTAAAAGRGTAAATTYTTCCCGCCCTGGTTGAGGCTAGCCAAGAATGCTGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGTAAGATCAAGCCCAACGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGAGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCAATCTTGATTAAACATATAMTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCTAATCTGGCCAATGAAGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAAAAAGCCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCACTTCCGTGTTGTCGTTGTGGACGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGACTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTACCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTAAAATTCAATTATATTAAAACACTTTTTCAATTCATATGAAATCTTTCACACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCGGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAAGGCCCACCCACGGCAGAGGAAGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGACTAAACATTTCAGTCCTAATTAATTTTCAATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAAAGATTTAATCGA +>Drosophila_adunca +TTAATAATATTCTTATTAAAAATATAATTATTTAAATATTTGGTCCTTTCGTACTAAAATATTTTAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATAATTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTGTATAATTAAAATAAACAAAATATAAAGATTNATAGGGTCTTCTCGTCTAGTAAATGTATTTTAGCTTGTGGACTACAAAATAAAATTGTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTCACAGGTACTGTGAACACCACTACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGTCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTACCCGTTTACTCTGCATCAAAGGCGGCTGCCCTAAGCTTCACCAGTTCCCTCTCGGTAAGTAAATATATAAATRTATATACTTCAGAAGGTGACAATCTATTGATTCTTAACAGAGATTGGCCCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCAAAACCACTCTGGTGCACAAATTTAACTCTTGGCTGAATGTTGAGCCACGGGTTGCGGAGCTACTCCTTGAGTTTCCCACACAGACAACGGAGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGTCTTCAAGATAGAGCTTCACCTTTAATAGAACAACTAATTTTTTTTCACGATCATGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTAGGGTATTTAATATTTATATTATTTTTTAATACATATATTAACCGATTTTTACTCCACGGACAATTAATTGAAATAATTTGAACTATTTTACCTGCAATTATTTTATTATTTATTGCTCTTCCTTCTTTACGTCTTTTATACCTTTTAGATGAAATTAACGAACCTTCAGTAACTTTAAAAAGAATTGGACACCAATGATATTGAAGTTATGAATATTCAGATTTTAATAATGGTGAATTTGATTCTTATATAATTCCTACTAATGAACTTGCCAATGATGGATTTCGATTATTAGACGTTGATAACCGAATTGTCTTACCAATAAATTCACAAATTCGAATTTTAGTTACAGCCGCAGATGTAATTCATTCATGAACAATTCCTGCTTTAGGAGTAAAAGTAGATGGAACTCCTGGTCGATTAAATCAAACTAATTTTTTTATCAACCGGCCAGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGTGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTACCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTTATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAACGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCACCTGAAGGTAAGCCTATACGCAAACATGACTCTTGGCACTCTTGATTAATCCTATACTATCTACAATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCGAATGAGGTGGCTGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTAGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTTGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCGGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGCTTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGTGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTATATTAAAATACATTTTCAATTCATTTAAAACCTTTCACACAGGCGGTCGCAATCGTCGTGTCTCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCATGCCCAATTAATTTATTATATTAACCTAATGCCTTTCTTTCAGATTCCCCCTGTTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCT +>Drosophila_oahuensis +TTAATGAAATTCTTGCTAAAAATATGATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTGTTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAACTTATTATAACAAAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATGGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACGCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATGTTAACAGAAATTGGCGCATATTACTGGTGTTACGGCATATTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATTCCACACAGACATCATTGCAGTGCGCACATAACTTTGTGAAAGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGCCTTCAAGATAGAGCTTCACCTTTAATAGAACAACTTATTTTTTTCCATGATCACGCTTTATTAATTTTAGTAATAATTACAGTCTTAGTCGGATACTTAATATTTATACTATTTTTTAATAGTTATATTAACCGATTTCTACTCCATGGTCAATTAATTGAAATAATTTGAACAATTTTACCTGCAATTATTTTATTATTTATTGCTCTCCCCTCTTTACGACTTCTCTACCTTTTAGATGAAATTAATGAACCTTCCGTAACTTTAAAAAGAATCGGTCACCAATGATATTGAAGTTATGAATATTCAGATTTTAATAACGTTGAATTTGATTCTTACATAATCCCTACAAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTTGACAACCGAATTATTTTACCTATAAACTCACAAATTCGAATTTTAGTYACAGCCGCGGATGTAATTCATTYTTGAACAATTCCCGCTTTAGGAGTAAAAGTTGACGGAACCCCGGGTYGTTTAAACCAAAMTAATTTTTTTATYAACCGACCAGGSTTATTTTATGGACAATGTTCAGAAATTTGCGGAGCTAACCATAGCTTTATACCTATTGTAATTGAAAGTGTACCTGTAAATTATTTTATTAAATGAATTTTTAGTAGAGTAAATTTTTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTAGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGAGGCATTGATCTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCGCAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCAAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGCGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTATATTAAAACACTTTTTCAATTCATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATC +>Drosophila_picticornis +TTAATAATATTCTTATTTAAAATATAATTATTTTAACATTTGGTCCTTTCGTACTAAAATGTTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCGTTATTAACGGATCAATTATTCATAAATCAATGATTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAACAGAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTACAATAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTCCTCATCAATGGCGCTGGTATCCTGGATGATCATCAGATTGAGCGCACCATTGCGGTGAACTTTGCAGGTACAGTGAACACCACAACAGCGATCTTGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCCGTAACTGGCTTTAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCATGTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAAGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATACTCCATCAATCCGGGCATTACCAAAACTATTCTGGTGCATAAATTCAACTCCTGGCTAAATGTTGAGCCACGCGTTGCCGAGCTTCTCCTTGAGCATCCCACACAGACAACACTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTCAAGATAGAGCTTCACCTTTAATAGAACAATTAATTTTTTTTCATGATCATGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTCGGATACTTAATATTTATATTATTTTTTAATAACTATATTAATCGGTTTCTTCTTCATGGGCAATTAATTGAAATAATTTGAACAATCTTGCCCGCAATTATTTTGTTATTTATCGCTCTCCCTTCCTTACGTCTTCTTTATCTTTTAGATGAAATTAACGAACCTTCAGTAACTCTAAAAAGAATTGGACATCAATGATATTGAAGTTATGAATATTCTGATTTTAACGATATTGAATTTGATTCTTATATAATTCCTACGAATGAATTAACAAATGACGGATTTCGTCTTTTAGATGTTGATAACCGAATTATTTTACCGATAAATTCTCAAATTCGAATTTTAGTGACAGCAGCAGATGTAATCCATTCTTGAACAATCCCCGCTTTAGGGGTAAAAGTAGATGGAACCCCTGGTCGACTAAATCAAACCAATTTTTTTATAAACCGACCTGGTTTATTYTACGGCCAATGTTCAGAAATCTGTGGAGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATCAAATGAATTTYTAACCAAGTAAATTYTTTTTTTGTGGTGCCGCATCAGTTTATCCCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAACGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATTTGAAGGTGAGTCTACACGCAAAGGTGACTCTTGGCAATCTTGATTAAACCTTTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCAAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAAAAAGCCAAGGTGCTGCGTGATCTCTTCCAGGCCAATCACTTCCGTGTTGTCGTTGTGGAAGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGTGACAATACCAAAGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCGACGTTCTTTGAGAGCTGCGGCGTCGCTGATCTTATCACGACGTGCTATGGTTCGTGTCCAACACTACATTTGAAATTTAATTATTAATTATATTTTAAAATCTTTTAATTCATATGAAATCTTTCACACAGGTGGTCGCAATCGTCGCGTATCTGAGGCTTTTGTCACATCTGGCAAAACCATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAAGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTAATTTATTTATTATAATAATCAAATATTAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCT +>Drosophila_primaeva +TTAATAATATTCTTACCAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTACTAATGGATCAATTACTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAACAAAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTACAAAAATTTTAAATGAAACAAGTTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATACTCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACTACTGCGATCTACGACTTCTGGGACAAGCGTAAGGGCGGACCAGGTGGTGTTATTGCCAACGTCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTNTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCTCTTCCCTTGCCGTAAGTAAACATATATTTATATAGACTTCCTCAGGTGGCAACCTATTGAATCTTAACAGAGATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCAGGCATTACCAAAACCGCTCTGGTGCATAAATGCAACTCTTGGCTGAATGATGAGCCAGGCGTTGACGAGCTTCTACTTGAGCATTCCACACAGACAACGGTCCAGTGCGCTCAGAACTTTGTCAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTCCAAGATAGCGCCTCACCCTTAATAGAACAACTTATTTTTTTCCATGACCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTTGGATATTTAATATTTATATTATTTTTTAATAACTATATTAATCGATTTTTATTGCACGGGCAACTAATTGAAATAATTTGAACAATTTTACCAGCAATTATTTTATTATTTATTGCTCTACCCTCTTTACGCCTTTTATACCTTTTAGATGAAATTAACGAACCCTCAGTTACTTTAAAAAGAATTGGACATCAATGATATTGAAGCTACGAATATTCAGATTTTAATAACGTAGAATTTGATTCGTATATAATCCCTACCAATGAATTAGCAAACGACGGATTTCGACTATTAGATGTTGATAACCGAATCATTTTACCTATAAATTCTCAAATCCGAATTTTAGTAACAGCAGCTGATGTAATTCACTCATGAACAATCCCAGCTTTAGGGGTAAAAGTTGATGGAACCCCTGGACGATTAAACCAAACCAATTTTTTTATTAACCGACCTGGGTTATTTTATGGACAATGCTCAGAAATTTGTGGGGCAAATCATAGCTTCATACCTATTGTAATTGAAAGTGTTCCCGTGAATTATTTTATTAAATGAATTTCTTCGAGAGTAAATTCTTCCGACCCTGGTTGAGGCTAGCCAAGAATGCTGATATACTCATTTTTGTGGTGCCCCATCAGTTTATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAATGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCCATACGCAAAGGTGACTCTGGGCAATCTTAATTAATCCTATAATATCAACTATCAGATACCATGCGCTGGGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACTACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTTGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGTGGTGCCTTGAAGAACATCGTCGCCTGTGGTGCGGGCTTCGTTGATGGTCTCAAACTGGGCGACAATACCAAGGCGGCGGTCATCCGTCTCGGCCTTATGGAAATGATTCGCTTCGTCGATGTCTTCTATCCAGGCAGTAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTAAATTTCAATTATATTAAAACACTTTTTCAATTCATGAATATGAAACCTTTCACACAGGCGGTCGCAATCGTCGTGTCTCTGAGGCCTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGACAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTTAGGCATCATTTATTTATTATATTAATTAAATATCAACTTTCTTTCAGATTCCCCCTGTTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTTAATCG +>Drosophila_nigribasis +TTAATAATATTCTTATTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACATTAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATTTATGGTTTTAAAAATTAAAAGTTTTTAAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTAACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCCTGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGCTGGCAACCAATTGAATCTTATCAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTCTGGTGCACAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTCCAAGATAGAGCTTCACCCTTAATAGAACAACTTATTTTTTTCCACGATCACGCCTTATTAATTTTAGTAATAATTACTGTTTTAGTTGGATATTTAATATTTATATTATTTTTTAATAGATATATTAACCGATTTCTACTTCATGGTCAATTAATTGAAATAATTTGAACAATCTTACCTGCAATTATTTTATTATTTATTGCTCTTCCCTCTTTACGACTTCTTTACCTTTTAGATGAAATTAATGAGCCTTCAGTAACTTTAAAAAGAATCGGGCACCAATGATATTGAAGCTACGAATATTCAGATTTTAATAATATTGAATTTGATTCATATATAATCCCTACTAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTAACAGCTGCAGATGTAATTCATTCTTGAACAATCCCTGCTTTAGGGGTAAAAGTTGATGGAACTCCTGGTCGTTTAAACCAAACTAATTTTTTTATTAACCGACCTGGTTTATTTTATGGGCAATGTTCAGAAATTTGTGGAGCTAATCATAGTTTTATACCTATTGTAATTGAGAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTTCCCGCCCGGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTAGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACCATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGCGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATATCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTATATTAAAACACTTTTTCAATTCATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGCCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTTAATCGA +>Drosophila_obscuripes +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCANAAATCAATGGTGGTAAAAATTAAAAGTTTTTTNAATTTTAATATCNCCCCAATAAAATWTTTTAWTTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTGTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGATAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAAGTGGCAACTAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTYAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCATGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTGGGATACTTAATATTTATACTATTTTTTAACAGTTATATTAACCGATTTCTACTACATGGACAACTAATTGAAATAATTTGAACAATCCTACCCGCAATTATTTTATTATTTATTGCTCTCCCTTCTTTACGGCTTCTTTACCTTTTAGATGAAATTAATGAACCTTCGGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAAGTTATGAATATTCAGATTTTAATAATGTTGAATTTGATTCATATATAATCCCTACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCAGATGTAATTCATTCTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACTCCTGGTCGATTAAACCAAACTAATTTTTTTATTAACCGACCGGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGCGCTAACCATAGTTTTATACCTATCGTAATCGAAAGCGTTCCTGTTAAATATTTTATTAAATGAATTTCTAATAGAGTAAATTCTTTCCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCTCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGTGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGCTTAAACCTGTAMTATATACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTATATTAAAACACTTTTTCAATTCATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGTCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCC +>Drosophila_silvestris +TTAATAATATTCTTATTTAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAGCGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTACTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATACTCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAATGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAACATATTTATACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACTGTATATTCCATCAATCCGGGCATTACCAAAACTGTTCTAGTGCATAAATTCAACTCCTGGCTGAATGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTGGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTTGGGTATTTAATATTTATATTATTTTTTAATAGTTATATTAACCGATTCCTACTCCACGGACAATTAATTGAAATAATTTGAACGATTTTACCCGCCATTATTTTATTATTTATTGCTCTCCCCTCCCTTCGTCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTAAAAAGAATTGGCCATCAATGATACTGAAGTTACGAATACTCAGATTTTAACAGAATCGAATTTGATTCATATATAATTCCTACAAATGAGTTAGCGAATGATGGATTCCGACTCCTAGATGTTGATAACCGAATTGTTTTGCCTATAAATTCTCAAATCCGAATTTTAGTAACCGCCGCAGATGTAATTCATTYTTGAACAATCCCTGYTYTTGGGGTAAAAGTTGATGGAABTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGGCCAGGCTTATTTTATGGACAATGTTCAGAAATTTGTGGGGCTAACCATAGTTTTATACCTATTGTAATCGAAAGTGTCCCTGTGAACWATTTTATTAAATGAATTTNTAACAGAGTAAATTYTTCCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTAGGCAAGATCAAGCCCCGCGCGATTGCCATATCACTGATCAAGGGTTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGTTTAAACCCGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAAGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTACGGGCTTTGTCGATGGTCTCAAGTTGGGTGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTHGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTSAGANCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTATATTAAAACACTTTTTCAATTCATATGGAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTAAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAWCTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAAAATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCC +>Drosophila_heteroneura +TTAATAATATTCTTATTTAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAGCGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTACTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATACTCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTGGTTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAATGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTGGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTTGGATATTTAATATTTATATTATTTTTTAATAGTTATATTAACCGATTCCTACTCCACGGACAATTAATTGAAATAATTTGAACGATTTTACCCGCCATTATTTTATTATTTATTGCTCTCCCCTCCCTTCGTCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTAAAAAGAATTGGCCATCAATGATACTGAAGTTACGAATACTCAGATTTTAACAGAATCGAATTTGATTCATATATAATTCCTACAAATGAGTTAGCGAACGATGGGTTCCGACTCCTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTAACCGCCGCAGATGTAATTCATTYTTGAACAATCCCTGCTCTTGGGGTAAAAGTTGATGGAACTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGGCCGGGCTTATTTTATGGACAATGTTCAGAAATTTGTGGGGCTAACCATAGTTTTATACCTATTGTAATCGAAAGTGTCCCTGTGAACTATTTTATTAAATGAATTTCTAACAGAGTAAATTYTTCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCGATTGCCATATCACTGATCAAGGGTTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGTTTAAACCCGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAAGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAGCTGGGAGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACAACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTATATTAAAACACTTTTTCAATTCATATGAAACTTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTCATTTATTTATAATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGGCATACACAAAATTTGCACAAATC +>Drosophila_differens +TTAATAATATTCTTATTAAAAATATAATTATCTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTAATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACGAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTACACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTGGGCCTTYAAGATAGCGCCTCGCCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTCGGGTACTTAATGTTTATATTATTTTTTAATAATTATATTAATCGGTTCCTACTTCATGGGCAATTAATTGAAATAATTTGAACAATTTTGCCCGCCATTATTTTATTATTTATTGCTCTTCCTTCCCTTCGTCTTCTTTACCTCCTAGATGAAATTAACGAACCCTCAGTTACTTTAAAAAGAATTGGTCATCAATGATATTGAAGTTACGAATACTCAGATTTTAACAGAATTGAATTTGATTCATACATAATTCCTACAAATGAGTTAGCAAACGATGGATTCCGTCTTTTAGATGTTGATAACCGAATTGTTTTACCCAYAAATTCTCAAATCCGAATTTTAGTAACTGCCGCGGATGTAATCCATTCTTGAACAATCCCCGCTCTTGGAGTAAAAGTTGATGGAACTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGACCGGGCTTATTCTACGGACAATGTTCAGAAATTTGTGGCGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTTCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCGATTGCCATATCACTGATCAAGGGYTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTACTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAGCTGGGAGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGTGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTATATTAAAACACTTTTTCAATTCATATGAAACTTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAAAATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTTAATCGA +>Drosophila_planitibia +TTAATAATATTCTTATTAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAGCGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTAATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTACACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGATGCCTACCAGAAATGTCAACATGAGCTAACCTGGGCCTTCAARATAGCGCCTCACCTTTAATARAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTCGGRTACTTAATGTTTATATTATTTTTTAAYAATTATATTAAYCGGTTCCTACTCCAYGGRCAATTAATTGAAATAATTTGAACAATTTTGCCCGCCATTATTTTATTATTTATTGCTCTCCCCTCTCTTCGTCTTCTTTACCTCCTAGATGAAATTAACGAACCYTCAGTTACTTTAAAAAGAATTGGYCATCAATGATATTGAAGTTACGAATACTCAGATTTTAACAGAATCGAATTTGATTCATACATAATCCCTACAAATGAGTTAGCGAAYGATGGNTTCCGACTTTTAGANGTTGATAACCGAATTGTTTTACCYATAAATTCTCAAATCCGAATTTTAGTAACTGCCGCNGATGTAATCCATTCTTGAACAATCCCCGCTYTTGGAGTAAAAGTTGATGGAACTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGACCGGGCTTATTTTACGGACAATGTTCAGAAATTTGTGGGGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTYTTTCGATATACTCATTTTTGTKGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCGATTGCCATATCACTGATCAAGGGTTTCGATAAGGCCGGGGGGGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGTTTAAACCCGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATACGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAGCTGGGAGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACTTTTGAAATTCAATTATATTAAAACACTTTTTCAATTCATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCC +>Drosophila_hemipeza +TTAATAATATTCTTAATAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGCTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAATGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACAACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCGACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCCCTATTAATTTTAGTTATAATTACCGTTTTAGTCGGATATTTAATATTTATATTATTTTTTAATAACTACATTAATCGATTTTTACTCCACGGACAATTAATTGAAATAATTTGAACAATTTTACCCGCCATTATTTTATTATYTATTGCTCTCCCTTCTTTACGTCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTAAAAAGAATTGGTCATCAATGATATTGAAGTTATGAATACTCAGATTTTAATAGAATTGAATTTGACTCTTATATAATCCCTACAAACGAGCTAACGAACGACGGATTTCGGCTATTAGATGTCGATAACCGAATTGTTTTACCTATAAATTCTCAAATTCGGATTTTAGTGACTGCCGCAGATGTAATCCATTCATGAACAATTCCGGCCCTTGGGGTAAAAGTTGATGGAACCCCTGGTCGATTAAATCAAACTAATTTTTTTATTAACCGACCAGGTTTATTTTACGGACAATGTTCAGAAATCTGCGGAGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTTAATTATTTTATTAAATGAATTTCTAATAGAGTAAATTCTTGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCCAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACACGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGCTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGTGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGCATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCAGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTATATTAAAACACTTTTTCAATTCATATGAAACTTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAAGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTAATTTTTTTATAATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAA +>Drosophila_ingens +TTAATAATATTCTTATTAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCRGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATTCCACACAGACATCATCGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATCTTAGTTATAATTACAGTTTTAGTGGGGTACTTAATATTTATACTATTTTTTAACTCTTATATTAACCGATTTTTACTACACGGACAATTAATTGAAATAATTTGAACAATCTTACCTGCAATTATTTTGTTATTCATTGCTCTACCTTCTTTACGACTTCTCTACCTTTTAGATGAAATCAATGAACCTTCAGTAACTTTAAAGAGAATTGGCCACCAATGATACTGAAGCTATGAATACTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTTGATAATCGAATCGTTTTACCCATAAATTCACAAATCCGAATTTTAGTGACAGCCGCAGATGTAATTCATTTTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAAMTCCTGGTCGTTTAAACCAAACTAATTTTTTTATTWACCGACCAGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGGGSTAATYATAGCTTTATACCTATTGTAATTGAAAGAGTCCCTGTTAATTATTTTATTAAATGAATTTYTAATAGAGTAAATTYTTTTCCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCTCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACACTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCAGTCATTCGTCTCGGACTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGANAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTATATTAAAACACTTTTTCAATTCATATGAAACCTTTCAAACAGGCGGTNGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCCCAYTTATTTATTATATTAACCAAATATCGCCCTTCTTTCAGATTCCCCCTATTT +>Drosophila_neopicta +TTAATAATATTCTTATTAAAAATATAATTATTTTCATATTTGGTCCTTTCGTACTAAAATATAATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAACCAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTTATCAGCTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGAGCTTCTCCCCTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATTTTAGTAATAATTACTGTTTTAGTTGGATATTTAATATTTATGCTATTTTTTAATAGTTACATTAACCGATTTCTACTTCACGGACAATTAATTGAAATAATTTGAACGATCTTACCTGCAATTATTTTATTATTTATTGCTCTCCCTTCTTTACGACTTCTATACCTTTTAGATGAAATTAATGAGCCCTCAGTAACTTTAAAAAGAATTGGTCATCAATGATATTGAAGTTATGAGTATTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAGCAAACGATGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTGACCGCCGCAGATGTAATTCATTCTTGAACAATCCCTGCTCTAGGGGTAAAAGTTGATGGAACTCCTGGTCGCTTAAACCAAACTAATTTTTTTATTAACCGACCTGGTTTATTCTACGGACAATGTTCAGAAATTTGTGGAGCTAATCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAATAGAGTAAATTCTTTCCCCGCCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTTGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAGCCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTATATTAAAACACTTTTTCAATTCATGTGATACCTTTCAAACAGGCGGTCGYAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATGTCAGGCCTAATTTATTTATTATATTAACCAAATATCAAAATTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGGGCAA +>Drosophila_substenoptera +TTAATAATATTCTTATTAAAAATACAATTATTTTCATATTTGGTCCTTTCGTACTAAAATATAATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTACAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGCAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGCTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTTTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACGCAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTCCAGGATAGAGCTTCACCCCTAATAGAACAACTTATTTTTTTCCACGATCACGCCCTATTAATTTTAGTAATAATTACTGTTTTAGTCGGATATTTAATATTTATATTATTTTTTAACAGGTATATTAACCGATTTCTTCTTCATGGCCAATTAATTGAAATAATTTGAACAATTTTGCCGGCAATTATTTTATTATTTATTGCTCTCCCCTCCCTACGACTTCTTTACCTTTTAGACGAAATTAATGAACCTTCAGTAACTTTAAAAAGAATTGGTCATCAATGATACTGAAGCTACGAATACTCAGATTTTAATAATGTTGAATTTGATTCTTATATAATTCCCACCAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTCGATAACCGAATCGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTGACAGCCGCAGATGTAATTCATTCTTGAACAATCCCCGCTTTAGGGGTAAAAGTTGACGGAACTCCAGGTCGTTTAAACCAAACTAATTTTTTTATCAACCGACCTGGCCTATTTTATGGACAATGTTCAGAAATTTGCGGAGCTAACCATAGTTTTATACCTATCGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTTCCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTAATTTTTGTGGTGCCGCATCAGTTRAKACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAKCCCAGCGCCATTGCCATATCACTGATCAAGGGKTTCGATAAGGCCGAGGGTGCCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGATATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTATATTAAAACACTTTTTCAATTCATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGGTTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAA +>Drosophila_neoperkinsi +TTAATAAGATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGCTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCAATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCATGATCACGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTGGGGTACTTAATATTTATATTATTTTTTAACAATTATATTAACCGATTTCTACTACATGGACAATTAATTGAAATAATTTGAACGATTCTTCCCGCAATTATCTTATTATTTATTGCTCTCCCTTCTTTACGGCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTGAAAAGAATTGGTCACCAGTGATATTGAAGTTATGAATACTCAGATTTTAATAACGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAATAAATGACGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCGGATGTAATTCATTCCTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACCCCTGGCCGTTTAAACCAAACTAATTTTTTTATTAACCGGCCAGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGTGCTAACCATAGCTTTATACCTATTGTAATTGAAAGTGTCCCTGTTAATTATTTTATTAAATGAATTTCTAATAGAGTAAATTCTTTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCTCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACWCTTTGTTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTATATTAAAACACTTTTTCAATTCATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTT +>Drosophila_melanocephala +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTATTAATGGATCAATTATTCATAAATCAATGGTTTTTAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTCAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTAGGATACTTAATATTTATACTATTTTTTAACAGTTATATTAACCGATTTCTACTACATGGACAACTAATTGAAATAATTTGAACAATTCTACCCGCAATTATTTTATTATTTATTGCTCTACCTTCTTTACGGCTTCTTTACCTTTTAGACGAAATTAATGAACCTTCGGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAAGTTATGAATATTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCCACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAACCGAATTATTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCAGATGTAATTCATTYTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACTCCTGGTCGATTAAACCAAACTAATTTTTTTATTAACCGACCAGGCTTATTTTATGGACAATGTTCAGAAATTTGTGGAGCTAATCATAGCTTTATACCTATTGTAATCGAAAGTGTTCCTGTTAAWTATWTTATTAAATGAATTTNTAATAGAGTAAATTCTTTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTRTTGGGCAAGATCAAGCCCAGTGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGACTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACTATACATTTGAAATTCAATTATATTAAAACACTTTTTCAATTCATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCATGGGCTAAACATTTCAGGCCTAACTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGC +>Drosophila_hanaulae +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATYTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGCTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGGTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCTCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTGATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGARTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATCGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGAGCTTCACCTTTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATCTTAGTTATAATTACAGTTTTAGTGGGATACTTAATATTTATATTATTTTTTAACTCTTATATTAACCGATTTTTACTACACGGACAATTAATTGAAATAATTTGAACAATCTTACCTGCAATTATTTTGTTATTTATTGCTCTCCCTTCTTTACGACTTCTTTACCTTTTAGATGAAATCAATGAACCTTCAGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAAGCTATGAATACTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAATCGAATCGTTTTACCTATAAATTCACAAATCCGAATTTTAGTGACAGCCGCGGATGTAATTCATTCTTGAACAATCCCTGCCCTAGGGGTAAAAGTTGATGGAACTCCTGGTCGTTTAAACCAAACTAATTTTTTTATTAACCGACCAGGTTTATTTTACGGACAATGCTCGGAAATTTGTGGTGCTAACCATAGCTTTATACCTATTGTAATTGAAAGTGTCCCTGTTAAATATTTTATTAAATGAATTTCTAATAGAGTAAATTCTTCCCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGTGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAAYACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGAAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTATATTAAAACACTTTTTCAATTCATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAA +>Drosophila_cyrtoloma +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATCGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTCAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCATGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTGGGATACTTAATATTTATACTATTTTTTAACAGTTATATTAACCGATTTCTACTACATGGACAACTAATTGAAATAATTTGAACAATCCTGCCCGCAATTATTTTATTATTTATTGCTCTCCCTTCTTTACGGCTTCTTTMCCTTTTAAATGAAATTAATGAACCTTCGGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAATTTATGAATATTCAGATTTTAATAANGTTGAATTTGATYCATATATAATCCCTACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCAGAWGTAATTCATTTTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACTCCTGGTYGATTAAACCAAAMTAATTTTTTTATTAACCGACCVGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGVGCTAACCATAGTTTTATACCTATYGTAATCGAAAGCGTTCCTGKTAAWTATWTTATTAAATGAATTTNTAATAGAGTAAATTCTTCCCGCCCTGGTTGAGGCTAGCCAAGAATGCCGATATACTHATTTTTGTGGTGCCNCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGYGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTATATTAAAACACTTTTTCAATTCATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCATGGGCTAAACATTTCAGGCCTAACTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCT diff --git a/example_files/pxt2new_example/Tree.nex b/example_files/pxt2new_example/Tree.nex new file mode 100644 index 0000000..988284a --- /dev/null +++ b/example_files/pxt2new_example/Tree.nex @@ -0,0 +1,8 @@ +#NEXUS +BEGIN TAXA; + TAXLABELS A B C; +END; + +BEGIN TREES; + TREE tree1 = ((A,B),C); +END; diff --git a/example_files/pxtlate_example/Sequence.fa b/example_files/pxtlate_example/Sequence.fa new file mode 100644 index 0000000..37f4084 --- /dev/null +++ b/example_files/pxtlate_example/Sequence.fa @@ -0,0 +1,6 @@ +>Sequence1 +AAATTTAAACCCGGGTAGANA +>Sequence2 +AAACCCGGGAAGATATAG +>Sequence3 +ATATATATATATATATTA diff --git a/example_files/pxtrt_example/taxa_to_retain.txt b/example_files/pxtrt_example/taxa_to_retain.txt new file mode 100644 index 0000000..ba1bc3a --- /dev/null +++ b/example_files/pxtrt_example/taxa_to_retain.txt @@ -0,0 +1,10 @@ +taxon_1 +taxon_2 +taxon_3 +taxon_5 +taxon_8 +taxon_13 +taxon_21 +taxon_34 +taxon_55 +taxon_89 diff --git a/example_files/pxtrt_example/yule_100taxa.tre b/example_files/pxtrt_example/yule_100taxa.tre new file mode 100644 index 0000000..6fe59c1 --- /dev/null +++ b/example_files/pxtrt_example/yule_100taxa.tre @@ -0,0 +1 @@ +(((((taxon_1:0.6982661782487307,taxon_2:0.6982661782487307):1.6249815565818162,((((taxon_3:1.312206397223513,((taxon_4:0.5760815262101513,taxon_5:0.5760815262101513):0.3800597625577158,(taxon_6:0.5784142495569773,((taxon_7:0.1013408642606795,taxon_8:0.1013408642606795):0.0180080170481407,taxon_9:0.1193488813088202):0.4590653682481571):0.3777270392108898):0.3560651084556459):0.3015487355203716,(taxon_10:0.119331262993442,taxon_11:0.119331262993442):1.4944238697504426):0.114414067646234,((taxon_12:1.042129626245301,((taxon_13:0.3231843744364307,taxon_14:0.3231843744364307):0.3630830459837346,taxon_15:0.6862674204201653):0.3558622058251357):0.033965211039515,taxon_16:1.076094837284816):0.6520743631053025):0.4425292521420627,((taxon_17:0.311799975030377,taxon_18:0.311799975030377):0.6851557909875696,((taxon_19:0.0799818354617869,taxon_20:0.0799818354617869):0.071310986598915,taxon_21:0.1512928220607019):0.8456629439572447):1.1737426865142346):0.1525492822983656):0.1729087371924658,taxon_22:2.4961564720230127):0.4728993649949182,((((taxon_23:0.3583995317552473,taxon_24:0.3583995317552473):0.7648238551093423,((taxon_25:0.5011856326323869,(taxon_26:0.0248901240195174,taxon_27:0.0248901240195174):0.4762955086128695):0.5125931002409674,(((taxon_28:0.3725923243960683,taxon_29:0.3725923243960683):0.0495327146718338,(taxon_30:0.0973334568622768,taxon_31:0.0973334568622768):0.3247915822056253):0.4217873265813239,((((taxon_32:0.089804301016561,taxon_33:0.089804301016561):0.1622736535184917,(taxon_34:0.0854779944389534,taxon_35:0.0854779944389534):0.1665999600960992):0.0740097392128209,(taxon_36:0.0088131835972796,taxon_37:0.0088131835972796):0.317274510150594):0.413608370114857,(taxon_38:0.4506500091522678,taxon_39:0.4506500091522678):0.2890460547104627):0.1042163017864954):0.1698663672241283):0.1094446539912353):0.1450118866055661,(taxon_40:0.7776768359705573,((taxon_41:0.208231047732685,(taxon_42:0.1354901837292877,(taxon_43:0.0817726067758073,taxon_44:0.0817726067758073):0.0537175769534803):0.0727408640033973):0.0962026632694082,taxon_45:0.3044337110020932):0.4732431249684641):0.4905584374995984):1.4448150307773564,((taxon_46:0.4878815683208897,(taxon_47:0.19161436302526,taxon_48:0.19161436302526):0.2962672052956297):0.2834052957414634,taxon_49:0.7712868640623531):1.9417634401851589):0.2560055327704189):2.0856420237227193,((((taxon_50:0.4300327915973226,taxon_51:0.4300327915973226):0.8969532453338611,(taxon_52:0.568578389427925,(taxon_53:0.1901867844114129,taxon_54:0.1901867844114129):0.3783916050165121):0.7584076475032586):0.0957604101295058,(taxon_55:1.333030563295464,taxon_56:1.333030563295464):0.0897158837652254):1.9006114748887064,((((taxon_57:1.5215922847946106,taxon_58:1.5215922847946106):0.3629256398116678,(((taxon_59:0.3287774057498947,taxon_60:0.3287774057498947):0.778047934593503,(taxon_61:0.9312398790523275,(taxon_62:0.1862099274523441,taxon_63:0.1862099274523441):0.7450299515999834):0.1755854612910701):0.4395266255043242,(taxon_64:1.5157765557746887,(taxon_65:0.3382093393346661,taxon_66:0.3382093393346661):1.1775672164400226):0.0305754100730331):0.3381659587585566):0.158441214773128,taxon_67:2.0429591393794064):0.6821756968121897,(((taxon_68:0.5813998986299325,taxon_69:0.5813998986299325):1.4790323777643182,((taxon_70:0.1761174296900734,taxon_71:0.1761174296900734):1.7187490334908082,((((taxon_72:0.4049442314233893,taxon_73:0.4049442314233893):0.1084215792456913,taxon_74:0.5133658106690806):0.2581008815398702,taxon_75:0.7714666922089508):0.7146531745199565,((taxon_76:0.182699621464824,taxon_77:0.182699621464824):0.4872594995170836,taxon_78:0.6699591209819076):0.8161607457469997):0.4087465964519743):0.1655658132133691):0.0613372838461452,((taxon_79:1.2053045938091311,((((taxon_80:0.1423167774958998,taxon_81:0.1423167774958998):0.1785248425729371,(taxon_82:0.0316995002500189,taxon_83:0.0316995002500189):0.289142119818818):0.4900281343229302,taxon_84:0.8108697543917671):0.2423451701550325,((taxon_85:0.4365585976233062,taxon_86:0.4365585976233062):0.5989741421624188,taxon_87:1.035532739785725):0.0176821847610746):0.1520896692623315):0.8985648856685668,(((taxon_88:0.2305834905611297,taxon_89:0.2305834905611297):1.5262685157149987,(((taxon_90:0.5584532975441237,(taxon_91:0.2718060672044986,(taxon_92:0.2158890655642036,taxon_93:0.2158890655642036):0.055917001640295):0.286647230339625):0.1590083230717578,taxon_94:0.7174616206158815):0.5376929005182145,(taxon_95:0.5548423513736935,taxon_96:0.5548423513736935):0.7003121697604024):0.5016974851420324):0.0402385025378456,(taxon_97:1.5057513411058525,(taxon_98:0.8681779379117796,(taxon_99:0.5807008789257022,taxon_100:0.5807008789257022):0.2874770589860773):0.637573403194073):0.2913391677081214):0.3067789706637241):0.0179000807626979):0.6033652759512003):0.5982230857577997):1.7313399387912545); diff --git a/example_files/pxtscale_example/ultra.tre b/example_files/pxtscale_example/ultra.tre new file mode 100644 index 0000000..a5c98e4 --- /dev/null +++ b/example_files/pxtscale_example/ultra.tre @@ -0,0 +1 @@ +((((s1:0.3603553431,s2:0.3603553431):0.8968782862,s3:1.257233629):0.4207546592,(((s4:0.1190332191,s5:0.1190332191):0.02544171746,s6:0.1444749366):0.7647640019,s7:0.9092389385):0.76874935):0.06349158892,((s8:0.3106889265,s9:0.3106889265):0.1031508249,s10:0.4138397514):1.327640126); diff --git a/example_files/pxupgma_example/drosophila.aln b/example_files/pxupgma_example/drosophila.aln new file mode 100644 index 0000000..d80f3c6 --- /dev/null +++ b/example_files/pxupgma_example/drosophila.aln @@ -0,0 +1,38 @@ +>Drosophila_setosifrons +TTAATAATATTCTTATATAAAATATAATTATTTTTATATTTGGTCCTTTCGTACTAAAATATAACAATTTTTTAAAGATAGAAACCAACCTGGCTTACACCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACAGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTACAAATGGATCAATTATTCATAAATTAATGGTTTTTTAAATTAAAAGTTTATTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAACTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAACTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTTATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTAAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCATGTCCATTGCGGTAAGTAAATATATAAATATATAAATACTTTATCAGGTGGCAGCCTATTTAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAATGTCGAACCACGCGTTGCCGAGCTTCTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGCCTTCAARATAGAGCTTCTCCCTTAATAGAACAACTAATTTTTTTTCATGATCACGCTTTATTAATTTTAGTAATAATCACTGTATTAGTTGGCTACTTAATATTTATATTATTTTTCAATAAATATATTAACCGATTTCTTCTTCATGGACAATTAATTGAAATAATTTGAACAATTCTACCTGCAATTATCTTATTATTTATTGCCCTTCCTTCTTTGCGTCTTCTTTATCTTCTTGATGAAATTAATGAACCTTCAGTAACTTTAAAAAGAATTGGACATCAATGATATTGAAGTTATGAATATTCAGATTTTAATAACATTGAATTTGACTCATACATAATCCCCACAAATGAATTAACAAATGATGGATTCCGTCTTTTAGACGTTGATAATCGAATTATTTTACCCATAAACTCTCAAATCCGAATTCTAGTAACAGCCGCTGATGTAATTCATTYTTGAACTATTCCCGCTTTAGGGGTAAAAGTTGATGGAANTCCTGGCCGATTAAACCAAANTAATTTTTTTATCAACCGACCAGGTTTATTTTACGGACAATGTTCAGAAATTTGTGGAGSTAACCACAGTTTTATACCTATTGTAATTGAAAGAGTCCCTGTTAACTATTTTATTAAATGAATTTYTAAAAGRGTAAATTYTT--CCCGCCCTGGTTGAGGCTAGCCAAGAATGCTGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGTAAGATCAAGCCCAACGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGAGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCAATCTTGATTAAACATATAMTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCTAATCTGGCCAATGAAGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAAAAAGCCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCACTTCCGTGTTGTCGTTGTGGACGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGACTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTACCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTAAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAATCTTTCACACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCGGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAAGGCCCACCCACGGCAGAGGAAGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGACTAAACATTTCAGTCCTAATTAATTTTCAATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAAAGATTTAATCGA +>Drosophila_adunca +TTAATAATATTCTTATTAAAAATATAATTATTTAAATATTTGGTCCTTTCGTACTAAAATATTTTAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATAATTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTGTATAATTAAAATAAACAAAATATAAAGATTNATAGGGTCTTCTCGTCTAGTAAATGTATTTTAGCTTGTGGACTACAAAATAAAATTGTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTCACAGGTACTGTGAACACCACTACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGTCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTACCCGTTTACTCTGCATCAAAGGCGGCTGCCCTAAGCTTCACCAGTTCCCTCTCGGTAAGTAAATATATAAATRTAT--ATACTTCAGAAGGTGACAATCTATTGATTCTTAACAGAGATTGGCCCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCAAAACCACTCTGGTGCACAAATTTAACTCTTGGCTGAATGTTGAGCCACGGGTTGCGGAGCTACTCCTTGAGTTTCCCACACAGACAACGGAGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGTCTTCAAGATAGAGCTTCACCTTTAATAGAACAACTAATTTTTTTTCACGATCATGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTAGGGTATTTAATATTTATATTATTTTTTAATACATATATTAACCGATTTTTACTCCACGGACAATTAATTGAAATAATTTGAACTATTTTACCTGCAATTATTTTATTATTTATTGCTCTTCCTTCTTTACGTCTTTTATACCTTTTAGATGAAATTAACGAACCTTCAGTAACTTTAAAAAGAATTGGACACCAATGATATTGAAGTTATGAATATTCAGATTTTAATAATGGTGAATTTGATTCTTATATAATTCCTACTAATGAACTTGCCAATGATGGATTTCGATTATTAGACGTTGATAACCGAATTGTCTTACCAATAAATTCACAAATTCGAATTTTAGTTACAGCCGCAGATGTAATTCATTCATGAACAATTCCTGCTTTAGGAGTAAAAGTAGATGGAACTCCTGGTCGATTAAATCAAACTAATTTTTTTATCAACCGGCCAGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGTGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTACCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTT-------------TGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTTATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAACGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCACCTGAAGGTAAGCCTATACGCAAACATGACTCTTGGCACTCTTGATTAATCCTATACTATCTACAATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCGAATGAGGTGGCTGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTAGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTTGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCGGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGCTTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGTGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ATACATTTTCAATTC----ATTTAAAACCTTTCACACAGGCGGTCGCAATCGTCGTGTCTCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCATGCCCAATTAATTTATTATATTAACCTAATGCC---TTTCTTTCAGATTCCCCCTGTTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCT-------------- +>Drosophila_oahuensis +TTAATGAAATTCTTGCTAAAAATATGATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTGTTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAACTTATTATAACAAAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATGGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACGCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATGTTAACAGAAATTGGCGCATATTACTGGTGTTACGGCATATTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATTCCACACAGACATCATTGCAGTGCGCACATAACTTTGTGAAAGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGCCTTCAAGATAGAGCTTCACCTTTAATAGAACAACTTATTTTTTTCCATGATCACGCTTTATTAATTTTAGTAATAATTACAGTCTTAGTCGGATACTTAATATTTATACTATTTTTTAATAGTTATATTAACCGATTTCTACTCCATGGTCAATTAATTGAAATAATTTGAACAATTTTACCTGCAATTATTTTATTATTTATTGCTCTCCCCTCTTTACGACTTCTCTACCTTTTAGATGAAATTAATGAACCTTCCGTAACTTTAAAAAGAATCGGTCACCAATGATATTGAAGTTATGAATATTCAGATTTTAATAACGTTGAATTTGATTCTTACATAATCCCTACAAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTTGACAACCGAATTATTTTACCTATAAACTCACAAATTCGAATTTTAGTYACAGCCGCGGATGTAATTCATTYTTGAACAATTCCCGCTTTAGGAGTAAAAGTTGACGGAACCCCGGGTYGTTTAAACCAAAMTAATTTTTTTATYAACCGACCAGGSTTATTTTATGGACAATGTTCAGAAATTTGCGGAGCTAACCATAGCTTTATACCTATTGTAATTGAAAGTGTACCTGTAAATTATTTTATTAAATGAATTTTTAGTAGAGTAAATTTTT----------GGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTAGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGAGGCATTGATCTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCGCAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCAAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGCGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATC------------------------- +>Drosophila_picticornis +TTAATAATATTCTTATTTAAAATATAATTATTTTAACATTTGGTCCTTTCGTACTAAAATGTTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCGTTATTAACGGATCAATTATTCATAAATCAATGATTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAACAGAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTACAATAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTCCTCATCAATGGCGCTGGTATCCTGGATGATCATCAGATTGAGCGCACCATTGCGGTGAACTTTGCAGGTACAGTGAACACCACAACAGCGATCTTGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCCGTAACTGGCTTTAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCATGTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAAGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATACTCCATCAATCCGGGCATTACCAAAACTATTCTGGTGCATAAATTCAACTCCTGGCTAAATGTTGAGCCACGCGTTGCCGAGCTTCTCCTTGAGCATCCCACACAGACAACACTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTCAAGATAGAGCTTCACCTTTAATAGAACAATTAATTTTTTTTCATGATCATGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTCGGATACTTAATATTTATATTATTTTTTAATAACTATATTAATCGGTTTCTTCTTCATGGGCAATTAATTGAAATAATTTGAACAATCTTGCCCGCAATTATTTTGTTATTTATCGCTCTCCCTTCCTTACGTCTTCTTTATCTTTTAGATGAAATTAACGAACCTTCAGTAACTCTAAAAAGAATTGGACATCAATGATATTGAAGTTATGAATATTCTGATTTTAACGATATTGAATTTGATTCTTATATAATTCCTACGAATGAATTAACAAATGACGGATTTCGTCTTTTAGATGTTGATAACCGAATTATTTTACCGATAAATTCTCAAATTCGAATTTTAGTGACAGCAGCAGATGTAATCCATTCTTGAACAATCCCCGCTTTAGGGGTAAAAGTAGATGGAACCCCTGGTCGACTAAATCAAACCAATTTTTTTATAAACCGACCTGGTTTATTYTACGGCCAATGTTCAGAAATCTGTGGAGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATCAAATGAATTTYTAACCAAGTAAATTYTT-------------------------------------------TTTTTGTGGTGCCGCATCAGTTTATCCCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAACGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATTTGAAGGTGAGTCTACACGCAAAGGTGACTCTTGGCAATCTTGATTAAACCTTTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCAAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAAAAAGCCAAGGTGCTGCGTGATCTCTTCCAGGCCAATCACTTCCGTGTTGTCGTTGTGGAAGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGTGACAATACCAAAGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCGACGTTCTTTGAGAGCTGCGGCGTCGCTGATCTTATCACGACGTGCTATGGTTCGTGTCCAACACTACATTTGAAATTTAATTATTAATTATATTTTAAAATCTTTTAATTC----ATATGAAATCTTTCACACAGGTGGTCGCAATCGTCGCGTATCTGAGGCTTTTGTCACATCTGGCAAAACCATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAAGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTAATTTATTTATTATAATAATCAAATATTAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCT-------------- +>Drosophila_primaeva +TTAATAATATTCTTACCAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTACTAATGGATCAATTACTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAACAAAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTACAAAAATTTTAAATGAAACAAGTTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATACTCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACTACTGCGATCTACGACTTCTGGGACAAGCGTAAGGGCGGACCAGGTGGTGTTATTGCCAACGTCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTNTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCTCTTCCCTTGCCGTAAGTAAACATATATTTATAT--AGACTTCCTCAGGTGGCAACCTATTGAATCTTAACAGAGATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCAGGCATTACCAAAACCGCTCTGGTGCATAAATGCAACTCTTGGCTGAATGATGAGCCAGGCGTTGACGAGCTTCTACTTGAGCATTCCACACAGACAACGGTCCAGTGCGCTCAGAACTTTGTCAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTCCAAGATAGCGCCTCACCCTTAATAGAACAACTTATTTTTTTCCATGACCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTTGGATATTTAATATTTATATTATTTTTTAATAACTATATTAATCGATTTTTATTGCACGGGCAACTAATTGAAATAATTTGAACAATTTTACCAGCAATTATTTTATTATTTATTGCTCTACCCTCTTTACGCCTTTTATACCTTTTAGATGAAATTAACGAACCCTCAGTTACTTTAAAAAGAATTGGACATCAATGATATTGAAGCTACGAATATTCAGATTTTAATAACGTAGAATTTGATTCGTATATAATCCCTACCAATGAATTAGCAAACGACGGATTTCGACTATTAGATGTTGATAACCGAATCATTTTACCTATAAATTCTCAAATCCGAATTTTAGTAACAGCAGCTGATGTAATTCACTCATGAACAATCCCAGCTTTAGGGGTAAAAGTTGATGGAACCCCTGGACGATTAAACCAAACCAATTTTTTTATTAACCGACCTGGGTTATTTTATGGACAATGCTCAGAAATTTGTGGGGCAAATCATAGCTTCATACCTATTGTAATTGAAAGTGTTCCCGTGAATTATTTTATTAAATGAATTTCTTCGAGAGTAAATTCTT--CCGACCCTGGTTGAGGCTAGCCAAGAATGCTGATATACTCATTTTTGTGGTGCCCCATCAGTTTATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAATGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCCATACGCAAAGGTGACTCTGGGCAATCTTAATTAATCCTATAATATCAACTATCAGATACCATGCGCTGGGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACTACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTTGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGTGGTGCCTTGAAGAACATCGTCGCCTGTGGTGCGGGCTTCGTTGATGGTCTCAAACTGGGCGACAATACCAAGGCGGCGGTCATCCGTCTCGGCCTTATGGAAATGATTCGCTTCGTCGATGTCTTCTATCCAGGCAGTAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTAAATTTCAATTAT--ATTAAA----ACACTTTTTCAATTCATGAATATGAAACCTTTCACACAGGCGGTCGCAATCGTCGTGTCTCTGAGGCCTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGACAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTTAGGCATCATTTATTTATTATATTAATTAAATATCAACTTTCTTTCAGATTCCCCCTGTTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTTAATCG- +>Drosophila_nigribasis +TTAATAATATTCTTATTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACATTAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATTTATGGTTTTAAAAATTAAAAGTTTTTAAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTAACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCCTGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGCTGGCAACCAATTGAATCTTATCAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTCTGGTGCACAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTCCAAGATAGAGCTTCACCCTTAATAGAACAACTTATTTTTTTCCACGATCACGCCTTATTAATTTTAGTAATAATTACTGTTTTAGTTGGATATTTAATATTTATATTATTTTTTAATAGATATATTAACCGATTTCTACTTCATGGTCAATTAATTGAAATAATTTGAACAATCTTACCTGCAATTATTTTATTATTTATTGCTCTTCCCTCTTTACGACTTCTTTACCTTTTAGATGAAATTAATGAGCCTTCAGTAACTTTAAAAAGAATCGGGCACCAATGATATTGAAGCTACGAATATTCAGATTTTAATAATATTGAATTTGATTCATATATAATCCCTACTAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTAACAGCTGCAGATGTAATTCATTCTTGAACAATCCCTGCTTTAGGGGTAAAAGTTGATGGAACTCCTGGTCGTTTAAACCAAACTAATTTTTTTATTAACCGACCTGGTTTATTTTATGGGCAATGTTCAGAAATTTGTGGAGCTAATCATAGTTTTATACCTATTGTAATTGAGAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTT--CCCGCCCGGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTAGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACCATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGCGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATATCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGCCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTTAATCGA +>Drosophila_obscuripes +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCANAAATCAATGGTGGTAAAAATTAAAAGTTTTTTNAATTTTAATATCNCCCCAATAAAATWTTTTAWTTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTGTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGATAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAAGTGGCAACTAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTYAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCATGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTGGGATACTTAATATTTATACTATTTTTTAACAGTTATATTAACCGATTTCTACTACATGGACAACTAATTGAAATAATTTGAACAATCCTACCCGCAATTATTTTATTATTTATTGCTCTCCCTTCTTTACGGCTTCTTTACCTTTTAGATGAAATTAATGAACCTTCGGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAAGTTATGAATATTCAGATTTTAATAATGTTGAATTTGATTCATATATAATCCCTACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCAGATGTAATTCATTCTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACTCCTGGTCGATTAAACCAAACTAATTTTTTTATTAACCGACCGGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGCGCTAACCATAGTTTTATACCTATCGTAATCGAAAGCGTTCCTGTTAAATATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT-TCCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCTCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGTGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGCTTAAACCTGTAMTATATACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGTCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCC--------------- +>Drosophila_silvestris +TTAATAATATTCTTATTTAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAGCGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTACTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATACTCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAATGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAACATATTTATACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACTGTATATTCCATCAATCCGGGCATTACCAAAACTGTTCTAGTGCATAAATTCAACTCCTGGCTGAATGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTGGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTTGGGTATTTAATATTTATATTATTTTTTAATAGTTATATTAACCGATTCCTACTCCACGGACAATTAATTGAAATAATTTGAACGATTTTACCCGCCATTATTTTATTATTTATTGCTCTCCCCTCCCTTCGTCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTAAAAAGAATTGGCCATCAATGATACTGAAGTTACGAATACTCAGATTTTAACAGAATCGAATTTGATTCATATATAATTCCTACAAATGAGTTAGCGAATGATGGATTCCGACTCCTAGATGTTGATAACCGAATTGTTTTGCCTATAAATTCTCAAATCCGAATTTTAGTAACCGCCGCAGATGTAATTCATTYTTGAACAATCCCTGYTYTTGGGGTAAAAGTTGATGGAABTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGGCCAGGCTTATTTTATGGACAATGTTCAGAAATTTGTGGGGCTAACCATAGTTTTATACCTATTGTAATCGAAAGTGTCCCTGTGAACWATTTTATTAAATGAATTTNTAACAGAGTAAATTYTT--CCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTAGGCAAGATCAAGCCCCGCGCGATTGCCATATCACTGATCAAGGGTTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGTTTAAACCCGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAAGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTACGGGCTTTGTCGATGGTCTCAAGTTGGGTGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTHGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTSAGANCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGGAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTAAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAWCTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAAAATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCC--------------- +>Drosophila_heteroneura +TTAATAATATTCTTATTTAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAGCGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTACTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATACTCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTGGTTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAATGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTGGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTTGGATATTTAATATTTATATTATTTTTTAATAGTTATATTAACCGATTCCTACTCCACGGACAATTAATTGAAATAATTTGAACGATTTTACCCGCCATTATTTTATTATTTATTGCTCTCCCCTCCCTTCGTCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTAAAAAGAATTGGCCATCAATGATACTGAAGTTACGAATACTCAGATTTTAACAGAATCGAATTTGATTCATATATAATTCCTACAAATGAGTTAGCGAACGATGGGTTCCGACTCCTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTAACCGCCGCAGATGTAATTCATTYTTGAACAATCCCTGCTCTTGGGGTAAAAGTTGATGGAACTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGGCCGGGCTTATTTTATGGACAATGTTCAGAAATTTGTGGGGCTAACCATAGTTTTATACCTATTGTAATCGAAAGTGTCCCTGTGAACTATTTTATTAAATGAATTTCTAACAGAGTAAATTYTT----------------------CCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCGATTGCCATATCACTGATCAAGGGTTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGTTTAAACCCGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAAGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAGCTGGGAGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACAACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACTTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTCATTTATTTATAATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGGCATACACAAAATTTGCACAAATC------------------------- +>Drosophila_differens +TTAATAATATTCTTATTAAAAATATAATTATCTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTAATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACGAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTACACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTGGGCCTTYAAGATAGCGCCTCGCCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTCGGGTACTTAATGTTTATATTATTTTTTAATAATTATATTAATCGGTTCCTACTTCATGGGCAATTAATTGAAATAATTTGAACAATTTTGCCCGCCATTATTTTATTATTTATTGCTCTTCCTTCCCTTCGTCTTCTTTACCTCCTAGATGAAATTAACGAACCCTCAGTTACTTTAAAAAGAATTGGTCATCAATGATATTGAAGTTACGAATACTCAGATTTTAACAGAATTGAATTTGATTCATACATAATTCCTACAAATGAGTTAGCAAACGATGGATTCCGTCTTTTAGATGTTGATAACCGAATTGTTTTACCCAYAAATTCTCAAATCCGAATTTTAGTAACTGCCGCGGATGTAATCCATTCTTGAACAATCCCCGCTCTTGGAGTAAAAGTTGATGGAACTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGACCGGGCTTATTCTACGGACAATGTTCAGAAATTTGTGGCGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTT--------------------------------CGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCGATTGCCATATCACTGATCAAGGGYTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTACTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAGCTGGGAGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGTGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACTTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAAAATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTTAATCGA +>Drosophila_planitibia +TTAATAATATTCTTATTAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAGCGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTAATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTACACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGATGCCTACCAGAAATGTCAACATGAGCTAACCTGGGCCTTCAARATAGCGCCTCACCTTTAATARAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTCGGRTACTTAATGTTTATATTATTTTTTAAYAATTATATTAAYCGGTTCCTACTCCAYGGRCAATTAATTGAAATAATTTGAACAATTTTGCCCGCCATTATTTTATTATTTATTGCTCTCCCCTCTCTTCGTCTTCTTTACCTCCTAGATGAAATTAACGAACCYTCAGTTACTTTAAAAAGAATTGGYCATCAATGATATTGAAGTTACGAATACTCAGATTTTAACAGAATCGAATTTGATTCATACATAATCCCTACAAATGAGTTAGCGAAYGATGGNTTCCGACTTTTAGANGTTGATAACCGAATTGTTTTACCYATAAATTCTCAAATCCGAATTTTAGTAACTGCCGCNGATGTAATCCATTCTTGAACAATCCCCGCTYTTGGAGTAAAAGTTGATGGAACTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGACCGGGCTTATTTTACGGACAATGTTCAGAAATTTGTGGGGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTYTT-------------------------------TCGATATACTCATTTTTGTKGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCGATTGCCATATCACTGATCAAGGGTTTCGATAAGGCCGGGGGGGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGTTTAAACCCGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATACGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAGCTGGGAGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACTTTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCC--------------- +>Drosophila_hemipeza +TTAATAATATTCTTAATAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGCTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAATGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACAACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCGACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCCCTATTAATTTTAGTTATAATTACCGTTTTAGTCGGATATTTAATATTTATATTATTTTTTAATAACTACATTAATCGATTTTTACTCCACGGACAATTAATTGAAATAATTTGAACAATTTTACCCGCCATTATTTTATTATYTATTGCTCTCCCTTCTTTACGTCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTAAAAAGAATTGGTCATCAATGATATTGAAGTTATGAATACTCAGATTTTAATAGAATTGAATTTGACTCTTATATAATCCCTACAAACGAGCTAACGAACGACGGATTTCGGCTATTAGATGTCGATAACCGAATTGTTTTACCTATAAATTCTCAAATTCGGATTTTAGTGACTGCCGCAGATGTAATCCATTCATGAACAATTCCGGCCCTTGGGGTAAAAGTTGATGGAACCCCTGGTCGATTAAATCAAACTAATTTTTTTATTAACCGACCAGGTTTATTTTACGGACAATGTTCAGAAATCTGCGGAGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTTAATTATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT----------------GGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCCAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACACGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGCTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGTGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGCATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCAGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACTTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAAGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTAATTTTTTTATAATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAA------------ +>Drosophila_ingens +TTAATAATATTCTTATTAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCRGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATTCCACACAGACATCATCGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATCTTAGTTATAATTACAGTTTTAGTGGGGTACTTAATATTTATACTATTTTTTAACTCTTATATTAACCGATTTTTACTACACGGACAATTAATTGAAATAATTTGAACAATCTTACCTGCAATTATTTTGTTATTCATTGCTCTACCTTCTTTACGACTTCTCTACCTTTTAGATGAAATCAATGAACCTTCAGTAACTTTAAAGAGAATTGGCCACCAATGATACTGAAGCTATGAATACTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTTGATAATCGAATCGTTTTACCCATAAATTCACAAATCCGAATTTTAGTGACAGCCGCAGATGTAATTCATTTTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAAMTCCTGGTCGTTTAAACCAAACTAATTTTTTTATTWACCGACCAGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGGGSTAATYATAGCTTTATACCTATTGTAATTGAAAGAGTCCCTGTTAATTATTTTATTAAATGAATTTYTAATAGAGTAAATTYTTTTCCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCTCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACACTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCAGTCATTCGTCTCGGACTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGANAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTNGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCCCAYTTATTTATTATATTAACCAAATATCGCCCTTCTTTCAGATTCCCCCTATTT----------------------------------------------------- +>Drosophila_neopicta +TTAATAATATTCTTATTAAAAATATAATTATTTTCATATTTGGTCCTTTCGTACTAAAATATAATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAACCAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTTATCAGCTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGAGCTTCTCCCCTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATTTTAGTAATAATTACTGTTTTAGTTGGATATTTAATATTTATGCTATTTTTTAATAGTTACATTAACCGATTTCTACTTCACGGACAATTAATTGAAATAATTTGAACGATCTTACCTGCAATTATTTTATTATTTATTGCTCTCCCTTCTTTACGACTTCTATACCTTTTAGATGAAATTAATGAGCCCTCAGTAACTTTAAAAAGAATTGGTCATCAATGATATTGAAGTTATGAGTATTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAGCAAACGATGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTGACCGCCGCAGATGTAATTCATTCTTGAACAATCCCTGCTCTAGGGGTAAAAGTTGATGGAACTCCTGGTCGCTTAAACCAAACTAATTTTTTTATTAACCGACCTGGTTTATTCTACGGACAATGTTCAGAAATTTGTGGAGCTAATCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT-TCCCCGCCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTTGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAGCCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATGTGATACCTTTCAAACAGGCGGTCGYAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATGTCAGGCCTAATTTATTTATTATATTAACCAAATATCAAAATTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGGGCAA---------------------------- +>Drosophila_substenoptera +TTAATAATATTCTTATTAAAAATACAATTATTTTCATATTTGGTCCTTTCGTACTAAAATATAATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTACAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGCAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGCTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTTTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACGCAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTCCAGGATAGAGCTTCACCCCTAATAGAACAACTTATTTTTTTCCACGATCACGCCCTATTAATTTTAGTAATAATTACTGTTTTAGTCGGATATTTAATATTTATATTATTTTTTAACAGGTATATTAACCGATTTCTTCTTCATGGCCAATTAATTGAAATAATTTGAACAATTTTGCCGGCAATTATTTTATTATTTATTGCTCTCCCCTCCCTACGACTTCTTTACCTTTTAGACGAAATTAATGAACCTTCAGTAACTTTAAAAAGAATTGGTCATCAATGATACTGAAGCTACGAATACTCAGATTTTAATAATGTTGAATTTGATTCTTATATAATTCCCACCAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTCGATAACCGAATCGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTGACAGCCGCAGATGTAATTCATTCTTGAACAATCCCCGCTTTAGGGGTAAAAGTTGACGGAACTCCAGGTCGTTTAAACCAAACTAATTTTTTTATCAACCGACCTGGCCTATTTTATGGACAATGTTCAGAAATTTGCGGAGCTAACCATAGTTTTATACCTATCGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTT--CCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTAATTTTTGTGGTGCCGCATCAGTTRAKACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAKCCCAGCGCCATTGCCATATCACTGATCAAGGGKTTCGATAAGGCCGAGGGTGCCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGATATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGGTTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAA------------ +>Drosophila_neoperkinsi +TTAATAAGATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGCTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCAATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCATGATCACGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTGGGGTACTTAATATTTATATTATTTTTTAACAATTATATTAACCGATTTCTACTACATGGACAATTAATTGAAATAATTTGAACGATTCTTCCCGCAATTATCTTATTATTTATTGCTCTCCCTTCTTTACGGCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTGAAAAGAATTGGTCACCAGTGATATTGAAGTTATGAATACTCAGATTTTAATAACGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAATAAATGACGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCGGATGTAATTCATTCCTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACCCCTGGCCGTTTAAACCAAACTAATTTTTTTATTAACCGGCCAGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGTGCTAACCATAGCTTTATACCTATTGTAATTGAAAGTGTCCCTGTTAATTATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT---------TGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCTCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACWCTTTGTTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTT------ +>Drosophila_melanocephala +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTATTAATGGATCAATTATTCATAAATCAATGGTTTTTAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTCAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTAGGATACTTAATATTTATACTATTTTTTAACAGTTATATTAACCGATTTCTACTACATGGACAACTAATTGAAATAATTTGAACAATTCTACCCGCAATTATTTTATTATTTATTGCTCTACCTTCTTTACGGCTTCTTTACCTTTTAGACGAAATTAATGAACCTTCGGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAAGTTATGAATATTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCCACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAACCGAATTATTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCAGATGTAATTCATTYTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACTCCTGGTCGATTAAACCAAACTAATTTTTTTATTAACCGACCAGGCTTATTTTATGGACAATGTTCAGAAATTTGTGGAGCTAATCATAGCTTTATACCTATTGTAATCGAAAGTGTTCCTGTTAAWTATWTTATTAAATGAATTTNTAATAGAGTAAATTCTT-------------------------------------------------TGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTRTTGGGCAAGATCAAGCCCAGTGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGACTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACTATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCATGGGCTAAACATTTCAGGCCTAACTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGC---------------------- +>Drosophila_hanaulae +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATYTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGCTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGGTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCTCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTGATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGARTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATCGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGAGCTTCACCTTTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATCTTAGTTATAATTACAGTTTTAGTGGGATACTTAATATTTATATTATTTTTTAACTCTTATATTAACCGATTTTTACTACACGGACAATTAATTGAAATAATTTGAACAATCTTACCTGCAATTATTTTGTTATTTATTGCTCTCCCTTCTTTACGACTTCTTTACCTTTTAGATGAAATCAATGAACCTTCAGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAAGCTATGAATACTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAATCGAATCGTTTTACCTATAAATTCACAAATCCGAATTTTAGTGACAGCCGCGGATGTAATTCATTCTTGAACAATCCCTGCCCTAGGGGTAAAAGTTGATGGAACTCCTGGTCGTTTAAACCAAACTAATTTTTTTATTAACCGACCAGGTTTATTTTACGGACAATGCTCGGAAATTTGTGGTGCTAACCATAGCTTTATACCTATTGTAATTGAAAGTGTCCCTGTTAAATATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT------CCCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGTGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAAYACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGAAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAA------------ +>Drosophila_cyrtoloma +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATCGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTCAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCATGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTGGGATACTTAATATTTATACTATTTTTTAACAGTTATATTAACCGATTTCTACTACATGGACAACTAATTGAAATAATTTGAACAATCCTGCCCGCAATTATTTTATTATTTATTGCTCTCCCTTCTTTACGGCTTCTTTMCCTTTTAAATGAAATTAATGAACCTTCGGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAATTTATGAATATTCAGATTTTAATAANGTTGAATTTGATYCATATATAATCCCTACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCAGAWGTAATTCATTTTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACTCCTGGTYGATTAAACCAAAMTAATTTTTTTATTAACCGACCVGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGVGCTAACCATAGTTTTATACCTATYGTAATCGAAAGCGTTCCTGKTAAWTATWTTATTAAATGAATTTNTAATAGAGTAAATTCTT--CCCGCCCTGGTTGAGGCTAGCCAAGAATGCCGATATACTHATTTTTGTGGTGCCNCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGYGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCATGGGCTAAACATTTCAGGCCTAACTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCT--------------------------------------------------------- diff --git a/example_files/pxvcf2fa_example/vcf_file b/example_files/pxvcf2fa_example/vcf_file new file mode 100644 index 0000000..916899f --- /dev/null +++ b/example_files/pxvcf2fa_example/vcf_file @@ -0,0 +1,83 @@ +##fileformat=VCFv4.1 +##contig= +##FORMAT= +#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT APC1 APC2 GPC1 GPC2 GPC3 GPCREF HH1 HH2 HH3 HH4 HH5 LPC1 LPC2 QHH1 QHH2 QHH3 QHH4 STG1 STG2 GNNSN +1 2 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 3 . A G . . . GT 0 1 1 1 0 1 0 0 0 0 0 1 1 0 1 0 1 1 1 1 +1 4 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 5 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 6 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 +1 9 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 +1 10 . A C . . . GT 0 0 1 1 1 1 1 1 1 1 1 0 0 1 1 1 1 1 1 1 +1 11 . T C . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 +1 12 . T C . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 +1 13 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 14 . T C . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 15 . C A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 16 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 17 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 20 . A T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 21 . T C . . . GT 0 0 1 1 1 1 0 0 0 1 0 1 1 1 1 0 1 1 1 1 +1 23 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 24 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 25 . T C . . . GT 0 0 0 1 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 0 +1 26 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 28 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 29 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 31 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 32 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 33 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 35 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 +1 37 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 38 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 39 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 +1 40 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 +1 41 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 42 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 43 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 +1 44 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 45 . C T . . . GT 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 1 0 0 +1 46 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 47 . T C . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 48 . T C . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 +1 51 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 +1 52 . T G . . . GT 0 1 1 0 0 0 1 1 1 0 1 0 1 0 1 1 1 0 0 0 +1 53 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 54 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 55 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 56 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 57 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 58 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 60 . T C . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 61 . A C . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 +1 63 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 65 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 66 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 67 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 +1 69 . C T . . . GT 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 +1 70 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 71 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 72 . T C . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 73 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 +1 74 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 75 . T C . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 76 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 77 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 79 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 80 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 81 . G T . . . GT 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 +1 82 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 83 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 84 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 85 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 86 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 +1 88 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 91 . T C . . . GT 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 +1 93 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 94 . G A . . . GT 0 1 1 1 0 0 1 1 1 1 1 1 1 1 0 1 1 1 1 0 +1 95 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 +1 96 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 97 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 98 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 99 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 +1 100 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 diff --git a/logo.png b/logo.png new file mode 100644 index 0000000..a447b00 Binary files /dev/null and b/logo.png differ diff --git a/src/Makefile.in b/src/Makefile.in new file mode 100644 index 0000000..1fe0f83 --- /dev/null +++ b/src/Makefile.in @@ -0,0 +1,661 @@ +RM := rm -f +## Use compiler from configure. May be specified by user with e.g.: +## ./configure CXX=/usr/local/bin/g++-7 +CXX := @CXX@ + +PREFIX := @prefix@ +MANDIR = $(PREFIX)/share/man + +CPPFLAGS := @CPPFLAGS@ +LDFLAGS := @LDFLAGS@ + +# profiling: +#-g -pg + +## set the nlopt around +HNLOPT := @HNLOPT@ +HARM := @HARM@ +HOMP := @HOMP@ + +CPP_LIBS = -llapack -lblas -lpthread -lm +ifeq "$(HNLOPT)" "Y" + CPP_LIBS += -lnlopt +endif + +ifeq "$(HARM)" "Y" + CPP_LIBS += -larmadillo +endif + +OPT_FLAGS := @OPT_FLAGS@ -Wall +ifeq "$(HOMP)" "Y" + OPT_FLAGS += -DOMP +endif + +ifneq "$(CXX)" "icc" + OPT_FLAGS += -ffast-math -ftree-vectorize +endif + +NLOPT_PROGRAMS := +ifeq "$(HNLOPT)" "Y" + NLOPT_PROGRAMS += pxbdfit pxcontrates pxstrec +endif + +FFLAGS = -O3 + +CONSEQ_SRC = main_consq.cpp +CONSEQ_OBJ = main_consq.o +CONSEQ_DEP = main_consq.d + +STREC_SRC = main_strec.cpp +STREC_OBJ = main_strec.o +STREC_DEP = main_strec.d + +MRCA_SRC = main_mrca.cpp +MRCA_OBJ = main_mrca.o +MRCA_DEP = main_mrca.d + +MRCACUT_SRC = main_mrca_cut.cpp +MRCACUT_OBJ = main_mrca_cut.o +MRCACUT_DEP = main_mrca_cut.d + +MRCANAME_SRC = main_mrca_name.cpp +MRCANAME_OBJ = main_mrca_name.o +MRCANAME_DEP = main_mrca_name.d + +BD_SIM_SRC = bd_sim.cpp main_bd_sim.cpp +BD_SIM_OBJ = bd_sim.o main_bd_sim.o +BD_SIM_DEP = bd_sim.d main_bd_sim.d + +BD_FIT_SRC = bd_fit.cpp main_bd_fit.cpp +BD_FIT_OBJ = bd_fit.o main_bd_fit.o +BD_FIT_DEP = bd_fit.d main_bd_fit.d + +NNI_SRC = main_nni.cpp +NNI_OBJ = main_nni.o +NNI_DEP = main_nni.d + +UPGMA_SRC = upgma.cpp main_upgma.cpp +UPGMA_OBJ = upgma.o main_upgma.o +UPGMA_DEP = upgma.d main_upgma.d + +2FA_SRC = main_s2fa.cpp +2FA_OBJ = main_s2fa.o +2FA_DEP = main_s2fa.d + +2PHY_SRC = main_s2phy.cpp +2PHY_OBJ = main_s2phy.o +2PHY_DEP = main_s2phy.d + +2NEX_SRC = main_s2nex.cpp +2NEX_OBJ = main_s2nex.o +2NEX_DEP = main_s2nex.d + +FQFILT_SRC = main_fqfilt.cpp +FQFILT_OBJ = main_fqfilt.o +FQFILT_DEP = main_fqfilt.d + +REVCOMP_SRC = main_revcomp.cpp edlib.cpp +REVCOMP_OBJ = main_revcomp.o edlib.o +REVCOMP_DEP = main_revcomp.d edlib.d + +NW_SRC = main_nw.cpp +NW_OBJ = main_nw.o +NW_DEP = main_nw.d + +SW_SRC = main_sw.cpp +SW_OBJ = main_sw.o +SW_DEP = main_sw.d + +SEQSAMP_SRC = seq_sample.cpp main_boot.cpp +SEQSAMP_OBJ = seq_sample.o main_boot.o +SEQSAMP_DEP = seq_sample.d main_boot.d + +SEQGEN_SRC = main_seqgen.cpp +SEQGEN_OBJ = main_seqgen.o +SEQGEN_DEP = main_seqgen.d + +CONCAT_SRC = concat.cpp main_cat.cpp +CONCAT_OBJ = concat.o main_cat.o +CONCAT_DEP = concat.d main_cat.d + +SSTAT_SRC = sstat.cpp main_sstat.cpp +SSTAT_OBJ = sstat.o main_sstat.o +SSTAT_DEP = sstat.d main_sstat.d + +CONTRATES_SRC = main_contrates.cpp optimize_cont_models_nlopt.cpp +CONTRATES_OBJ = main_contrates.o optimize_cont_models_nlopt.o +CONTRATES_DEP = main_contrates.d optimize_cont_models_nlopt.d + +SEQRECODE_SRC = recode.cpp main_recode.cpp +SEQRECODE_OBJ = recode.o main_recode.o +SEQRECODE_DEP = recode.d main_recode.d + +BP_SRC = main_bp.cpp +BP_OBJ = main_bp.o +BP_DEP = main_bp.d + +#BPSEQ_SRC = main_bpseq.cpp +#BPSEQ_OBJ = main_bpseq.o +#BPSEQ_DEP = main_bpseq.d + +T2NEW_SRC = main_t2new.cpp +T2NEW_OBJ = main_t2new.o +T2NEW_DEP = main_t2new.d + +T2NEX_SRC = main_t2nex.cpp +T2NEX_OBJ = main_t2nex.o +T2NEX_DEP = main_t2nex.d + +RR_SRC = main_rr.cpp +RR_OBJ = main_rr.o +RR_DEP = main_rr.d + +MONO_SRC = main_mono.cpp +MONO_OBJ = main_mono.o +MONO_DEP = main_mono.d + +RMT_SRC = main_rmt.cpp +RMT_OBJ = main_rmt.o +RMT_DEP = main_rmt.d + +TRT_SRC = main_trt.cpp +TRT_OBJ = main_trt.o +TRT_DEP = main_trt.d + +RMK_SRC = main_rmk.cpp +RMK_OBJ = main_rmk.o +RMK_DEP = main_rmk.d + +#removing for fortran, updating for non-fortran in process +#SM0_SRC = main_sm0.cpp +#SM0_OBJ = main_sm0.o +#SM0_DEP = main_sm0.d + +#SM2A_SRC = main_sm2a.cpp +#SM2A_OBJ = main_sm2a.o +#SM2A_DEP = main_sm2a.d + +CLSQ_SRC = clean_seq.cpp main_clsq.cpp +CLSQ_OBJ = clean_seq.o main_clsq.o +CLSQ_DEP = clean_seq.d main_clsq.d + +CLTR_SRC = clean_tree.cpp main_cltr.cpp +CLTR_OBJ = clean_tree.o main_cltr.o +CLTR_DEP = clean_tree.d main_cltr.d + +AA2C_SRC = aa2cdn.cpp main_aa2cdn.cpp +AA2C_OBJ = aa2cdn.o main_aa2cdn.o +AA2C_DEP = aa2cdn.d main_aa2cdn.d + +TLATE_SRC = tlate.cpp main_tlate.cpp +TLATE_OBJ = tlate.o main_tlate.o +TLATE_DEP = tlate.d main_tlate.d + +RMS_SRC = main_rms.cpp +RMS_OBJ = main_rms.o +RMS_DEP = main_rms.d + +NJ_SRC = nj.cpp main_nj.cpp +NJ_OBJ = nj.o main_nj.o +NJ_DEP = nj.d main_nj.d + +LOGMANIP_SRC = log_manip.cpp main_log.cpp +LOGMANIP_OBJ = log_manip.o main_log.o +LOGMANIP_DEP = log_manip.d main_log.d + +VCF2FA_SRC = vcf_reader.cpp main_vcf2fa.cpp +VCF2FA_OBJ = vcf_reader.o main_vcf2fa.o +VCF2FA_DEP = vcf_reader.d main_vcf2fa.d + +LS_SQ_SRC = seq_info.cpp main_lssq.cpp +LS_SQ_OBJ = seq_info.o main_lssq.o +LS_SQ_DEP = seq_info.d main_lssq.d + +LS_TR_SRC = tree_info.cpp main_lstr.cpp +LS_TR_OBJ = tree_info.o main_lstr.o +LS_TR_DEP = tree_info.d main_lstr.d + +COMPTEST_SRC = comp_test.cpp main_comp.cpp +COMPTEST_OBJ = comp_test.o main_comp.o +COMPTEST_DEP = comp_test.d main_comp.d + +RELABEL_TREE_SRC = relabel.cpp main_rlt.cpp +RELABEL_TREE_OBJ = relabel.o main_rlt.o +RELABEL_TREE_DEP = relabel.d main_rlt.d + +RELABEL_SEQ_SRC = relabel.cpp main_rls.cpp +RELABEL_SEQ_OBJ = relabel.o main_rls.o +RELABEL_SEQ_DEP = relabel.d main_rls.d + +RESCALE_TREE_SRC = tscale.cpp main_tscale.cpp +RESCALE_TREE_OBJ = tscale.o main_tscale.o +RESCALE_TREE_DEP = tscale.d main_tscale.d + +TCOL_SRC = main_tcol.cpp +TCOL_OBJ = main_tcol.o +TCOL_DEP = main_tcol.d + +TCOMB_SRC = main_tcomb.cpp +TCOMB_OBJ = main_tcomb.o +TCOMB_DEP = main_tcomb.d + +TGEN_SRC = tgen.cpp main_tgen.cpp +TGEN_OBJ = tgen.o main_tgen.o +TGEN_DEP = tgen.d main_tgen.d + +SSORT_SRC = main_ssort.cpp +SSORT_OBJ = main_ssort.o +SSORT_DEP = main_ssort.d + +POLY_SRC = polytomy.cpp main_poly.cpp +POLY_OBJ = polytomy.o main_poly.o +POLY_DEP = polytomy.d main_poly.d + +COLLAPSE_TREE_SRC = collapse_tree.cpp main_colt.cpp +COLLAPSE_TREE_OBJ = collapse_tree.o main_colt.o +COLLAPSE_TREE_DEP = collapse_tree.d main_colt.d + +CPP_SRCS += \ +./utils.cpp \ +./citations.cpp \ +./log.cpp \ +./superdouble.cpp \ +./timer.cpp + +TREE_SRCS += \ +./node.cpp \ +./tree.cpp \ +./tree_reader.cpp \ +./tree_utils.cpp + +SEQ_SRCS += \ +./sequence.cpp \ +./seq_reader.cpp \ +./seq_utils.cpp \ +./seq_models.cpp \ +./pairwise_alignment.cpp + +RATE_SRCS += \ +./rate_model.cpp \ +./state_reconstructor.cpp \ +./optimize_state_reconstructor_nlopt.cpp \ +./optimize_state_reconstructor_periods_nlopt.cpp \ +./branch_segment.cpp \ +./cont_models.cpp \ +./seq_gen.cpp +#removing to get rid of fortran. update in process +#./mcmc.cpp \ +#./state_reconstructor_simple.cpp \ + +CPP_OBJS += \ +./utils.o \ +./citations.o \ +./log.o \ +./superdouble.o \ +./timer.o + +TREE_OBJS += \ +./node.o \ +./tree.o \ +./tree_reader.o \ +./tree_utils.o + +SEQ_OBJS += \ +./sequence.o \ +./seq_reader.o \ +./seq_utils.o \ +./seq_models.o \ +./pairwise_alignment.o + +RATE_OBJS += \ +./rate_model.o \ +./state_reconstructor.o \ +./optimize_state_reconstructor_nlopt.o \ +./optimize_state_reconstructor_periods_nlopt.o \ +./branch_segment.o \ +./cont_models.o \ +./seq_gen.o +#removing to get rid of fortran. update in process +#./mcmc.o \ +#./state_reconstructor_simple.o \ + +CPP_DEPS += \ +./utils.d \ +./citations.d \ +./log.d \ +./superdouble.d \ +./timer.d + +TREE_DEPS += \ +./node.d \ +./tree.d \ +./tree_reader.d \ +./tree_utils.d + +SEQ_DEPS += \ +./sequence.d \ +./seq_reader.d \ +./seq_utils.d \ +./seq_models.d \ +./pairwise_alignment.d + +RATE_DEPS += \ +./rate_model.d \ +./state_reconstructor.d \ +./optimize_state_reconstructor_nlopt.d \ +./optimize_state_reconstructor_periods_nlopt.d \ +./branch_segment.d \ +./cont_models.d \ +./seq_gen.d +#removing to get rid of fortran. update in process +#./mcmc.d \ +#./state_reconstructor_simple.d \ + +main_%.o: ./main_%.cpp + $(CXX) $(OPT_FLAGS) $(CPPFLAGS) $(LDFLAGS) -c -fmessage-length=0 -MMD -MP -MF "$(@:%.o=%.d)" -o "$@" "$<" + +%.o: ./%.cpp ./%.h + $(CXX) $(OPT_FLAGS) $(CPPFLAGS) $(LDFLAGS) -c -fmessage-length=0 -MMD -MP -MF "$(@:%.o=%.d)" -o "$@" "$<" + +PROGS := pxaa2cdn pxbdsim pxboot pxbp pxcat pxclsq pxcltr pxcolt pxcomp pxconsq pxfqfilt pxlog pxlssq pxlstr pxmono pxmrca pxmrcacut pxmrcaname pxnw pxpoly pxrecode pxrevcomp pxrls pxrlt pxrmk pxrms pxrmt pxrr pxs2fa pxs2nex pxs2phy pxseqgen pxssort pxsstat pxsw pxt2new pxt2nex pxtcol pxtcomb pxtgen pxtlate pxtrt pxtscale pxvcf2fa $(NLOPT_PROGRAMS) + +# default all target +all: $(PROGS) + +## Sequence-oriented programs ## + +pxlssq: $(CPP_OBJS) $(SEQ_OBJS) $(LS_SQ_OBJ) + @echo 'bulding pxlssq' + $(CXX) -o "pxlssq" $(OPT_FLAGS) $(LS_SQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + +pxconsq: $(CPP_OBJS) $(SEQ_OBJS) $(CONSEQ_OBJ) + @echo 'building pxconsq' + $(CXX) -o "pxconsq" $(OPT_FLAGS) $(CONSEQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + +pxclsq: $(CPP_OBJS) $(SEQ_OBJS) $(CLSQ_OBJ) + @echo 'building pxclsq' + $(CXX) -o "pxclsq" $(OPT_FLAGS) $(CLSQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + +pxrms: $(CPP_OBJS) $(SEQ_OBJS) $(RMS_OBJ) + @echo 'building pxrms' + $(CXX) -o "pxrms" $(OPT_FLAGS) $(RMS_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + +pxaa2cdn: $(CPP_OBJS) $(SEQ_OBJS) $(AA2C_OBJ) + @echo 'building pxaa2cdn' + $(CXX) -o "pxaa2cdn" $(OPT_FLAGS) $(AA2C_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + +pxs2fa: $(CPP_OBJS) $(SEQ_OBJS) $(2FA_OBJ) + @echo 'building pxs2fa' + $(CXX) -o "pxs2fa" $(OPT_FLAGS) $(2FA_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + +pxs2phy: $(CPP_OBJS) $(SEQ_OBJS) $(2PHY_OBJ) + @echo 'building pxs2phy' + $(CXX) -o "pxs2phy" $(OPT_FLAGS) $(2PHY_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + +pxs2nex: $(CPP_OBJS) $(SEQ_OBJS) $(2NEX_OBJ) + @echo 'building pxs2nex' + $(CXX) -o "pxs2nex" $(OPT_FLAGS) $(2NEX_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + +pxfqfilt: $(CPP_OBJS) $(SEQ_OBJS) $(FQFILT_OBJ) + @echo 'building pxfqfilt' + $(CXX) -o "pxfqfilt" $(OPT_FLAGS) $(FQFILT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + +pxrevcomp: $(CPP_OBJS) $(SEQ_OBJS) $(REVCOMP_OBJ) + @echo 'building pxrevcomp' + $(CXX) -o "pxrevcomp" $(OPT_FLAGS) $(REVCOMP_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + +pxnw: $(CPP_OBJS) $(SEQ_OBJS) $(NW_OBJ) + @echo 'building pxnw' + $(CXX) -o "pxnw" $(OPT_FLAGS) $(NW_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + +pxsw: $(CPP_OBJS) $(SEQ_OBJS) $(SW_OBJ) + @echo 'building pxsw' + $(CXX) -o "pxsw" $(OPT_FLAGS) $(SW_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + +pxboot: $(CPP_OBJS) $(SEQ_OBJS) $(SEQSAMP_OBJ) + @echo 'building pxboot' + $(CXX) -o "pxboot" $(OPT_FLAGS) $(SEQSAMP_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + +pxtlate: $(CPP_OBJS) $(SEQ_OBJS) $(TLATE_OBJ) + @echo 'building pxtlate' + $(CXX) -o "pxtlate" $(OPT_FLAGS) $(TLATE_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + +pxcat: $(CPP_OBJS) $(SEQ_OBJS) $(CONCAT_OBJ) + @echo 'building pxcat' + $(CXX) -o "pxcat" $(OPT_FLAGS) $(CONCAT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + +pxsstat: $(CPP_OBJS) $(SEQ_OBJS) $(SSTAT_OBJ) + @echo 'building pxsstat' + $(CXX) -o "pxsstat" $(OPT_FLAGS) $(SSTAT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + +pxrecode: $(CPP_OBJS) $(SEQ_OBJS) $(SEQRECODE_OBJ) + @echo 'building pxrecode' + $(CXX) -o "pxrecode" $(OPT_FLAGS) $(SEQRECODE_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + +pxssort: $(CPP_OBJS) $(SEQ_OBJS) $(SSORT_OBJ) + @echo 'building pxssort' + $(CXX) -o "pxssort" $(OPT_FLAGS) $(SSORT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + +pxcomp: $(CPP_OBJS) $(SEQ_OBJS) $(COMPTEST_OBJ) + @echo 'building pxcomp' + $(CXX) -o "pxcomp" $(OPT_FLAGS) $(COMPTEST_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + +pxvcf2fa: $(CPP_OBJS) $(SEQ_OBJS) $(VCF2FA_OBJ) + @echo 'building pxvcf2fa' + $(CXX) -o "pxvcf2fa" $(OPT_FLAGS) $(VCF2FA_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + cat man/$@.1.in > man/$@.1 + + +## Tree-oriented programs ## + +pxbdsim: $(CPP_OBJS) $(TREE_OBJS) $(BD_SIM_OBJ) + @echo 'building pxbdsim' + $(CXX) -o "pxbdsim" $(OPT_FLAGS) $(BD_SIM_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxbdfit: $(CPP_OBJS) $(TREE_OBJS) $(BD_FIT_OBJ) + @echo 'building pxbdfit' + $(CXX) -o "pxbdfit" $(OPT_FLAGS) $(BD_FIT_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) + cat man/$@.1.in > man/$@.1 + +pxnni: $(CPP_OBJS) $(TREE_OBJS) $(NNI_OBJ) + @echo 'building pxnni' + $(CXX) -o "pxnni" $(OPT_FLAGS) $(NNI_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) + cat man/$@.1.in > man/$@.1 + +pxlstr: $(CPP_OBJS) $(TREE_OBJS) $(LS_TR_OBJ) + @echo 'building pxlstr' + $(CXX) -o "pxlstr" $(OPT_FLAGS) $(LS_TR_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxmrca: $(CPP_OBJS) $(TREE_OBJS) $(MRCA_OBJ) + @echo 'building pxmrca' + $(CXX) -o "pxmrca" $(OPT_FLAGS) $(MRCA_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxmrcacut: $(CPP_OBJS) $(TREE_OBJS) $(MRCACUT_OBJ) + @echo 'building pxmrcacut' + $(CXX) -o "pxmrcacut" $(OPT_FLAGS) $(MRCACUT_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxmrcaname: $(CPP_OBJS) $(TREE_OBJS) $(MRCANAME_OBJ) + @echo 'building pxmrcaname' + $(CXX) -o "pxmrcaname" $(OPT_FLAGS) $(MRCANAME_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxcltr: $(CPP_OBJS) $(TREE_OBJS) $(CLTR_OBJ) + @echo 'building pxcltr' + $(CXX) -o "pxcltr" $(OPT_FLAGS) $(CLTR_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxt2new: $(CPP_OBJS) $(TREE_OBJS) $(T2NEW_OBJ) + @echo 'building pxt2new' + $(CXX) -o "pxt2new" $(OPT_FLAGS) $(T2NEW_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxt2nex: $(CPP_OBJS) $(TREE_OBJS) $(T2NEX_OBJ) + @echo 'building pxt2nex' + $(CXX) -o "pxt2nex" $(OPT_FLAGS) $(T2NEX_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxrr: $(CPP_OBJS) $(TREE_OBJS) $(RR_OBJ) + @echo 'building pxrr' + $(CXX) -o "pxrr" $(OPT_FLAGS) $(RR_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxmono: $(CPP_OBJS) $(TREE_OBJS) $(MONO_OBJ) + @echo 'building pxmono' + $(CXX) -o "pxmono" $(OPT_FLAGS) $(MONO_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxrmt: $(CPP_OBJS) $(TREE_OBJS) $(RMT_OBJ) + @echo 'building pxrmt' + $(CXX) -o "pxrmt" $(OPT_FLAGS) $(RMT_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxtrt: $(CPP_OBJS) $(TREE_OBJS) $(TRT_OBJ) + @echo 'building pxtrt' + $(CXX) -o "pxtrt" $(OPT_FLAGS) $(TRT_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxrmk: $(CPP_OBJS) $(TREE_OBJS) $(RMK_OBJ) + @echo 'building pxrmk' + $(CXX) -o "pxrmk" $(OPT_FLAGS) $(RMK_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxlog: $(CPP_OBJS) $(TREE_OBJS) $(LOGMANIP_OBJ) + @echo 'building pxlog' + $(CXX) -o "pxlog" $(OPT_FLAGS) $(LOGMANIP_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxtscale: $(CPP_OBJS) $(TREE_OBJS) $(RESCALE_TREE_OBJ) + @echo 'building pxtscale' + $(CXX) -o "pxtscale" $(OPT_FLAGS) $(RESCALE_TREE_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxtcol: $(CPP_OBJS) $(TREE_OBJS) $(TCOL_OBJ) + @echo 'building pxtcol' + $(CXX) -o "pxtcol" $(OPT_FLAGS) $(TCOL_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxtcomb: $(CPP_OBJS) $(TREE_OBJS) $(TCOMB_OBJ) + @echo 'building pxtcomb' + $(CXX) -o "pxtcomb" $(OPT_FLAGS) $(TCOMB_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxtgen: $(CPP_OBJS) $(TREE_OBJS) $(TGEN_OBJ) + @echo 'building pxtgen' + $(CXX) -o "pxtgen" $(OPT_FLAGS) $(TGEN_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxpoly: $(CPP_OBJS) $(TREE_OBJS) $(POLY_OBJ) + @echo 'building pxpoly' + $(CXX) -o "pxpoly" $(OPT_FLAGS) $(POLY_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxcolt: $(CPP_OBJS) $(TREE_OBJS) $(COLLAPSE_TREE_OBJ) + @echo 'building pxcolt' + $(CXX) -o "pxcolt" $(OPT_FLAGS) $(COLLAPSE_TREE_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxbp: $(CPP_OBJS) $(TREE_OBJS) $(BP_OBJ) + @echo 'building pxbp' + $(CXX) -o "pxbp" $(OPT_FLAGS) $(BP_OBJ) $(CPP_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + + +## Mixed tree + sequences ## + +pxrls: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RELABEL_SEQ_OBJ) + @echo 'building pxrls' + $(CXX) -o "pxrls" $(OPT_FLAGS) $(RELABEL_SEQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxrlt: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RELABEL_TREE_OBJ) + @echo 'building pxrlt' + $(CXX) -o "pxrlt" $(OPT_FLAGS) $(RELABEL_TREE_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxupgma: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(UPGMA_OBJ) + @echo 'building pxupgma' + $(CXX) -o "pxupgma" $(OPT_FLAGS) $(UPGMA_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + +pxnj: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(NJ_OBJ) + @echo 'building pxnj' + $(CXX) -o "pxnj" $(OPT_FLAGS) $(NJ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) + cat man/$@.1.in > man/$@.1 + + +## ... + rates ## + +pxseqgen: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RATE_OBJS) $(SEQGEN_OBJ) $(FORT_OBJS) + @echo 'building pxseqgen' + $(CXX) -o "pxseqgen" $(OPT_FLAGS) $(SEQGEN_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RATE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) + cat man/$@.1.in > man/$@.1 + +pxcontrates: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(CONTRATES_OBJ) $(RATE_OBJS) + @echo 'building pxcontrates' + $(CXX) -o "pxcontrates" $(OPT_FLAGS) $(CONTRATES_OBJ) $(RATE_OBJS) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) + cat man/$@.1.in > man/$@.1 + +pxstrec: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RATE_OBJS) $(STREC_OBJ) #$(FORT_OBJS) + @echo 'building pxstrec' + $(CXX) -o "pxstrec" $(OPT_FLAGS) $(STREC_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RATE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) #$(FORT_OBJS) -lgfortran + cat man/$@.1.in > man/$@.1 + + + +#removing until fortran update +#pxsm0: $(CPP_OBJS) $(RATE_OBJS) $(SM0_OBJ) $(FORT_OBJS) +# @echo 'building pxsm0' +# $(CXX) -o "pxsm0" $(OPT_FLAGS) $(SM0_OBJ) $(CPP_OBJS) $(RATE_OBJS) $(FORT_OBJS) $(CPP_LIBS) -lgfortran + +#pxsm2a: $(CPP_OBJS) $(RATE_OBJS) $(SM2A_OBJ) $(FORT_OBJS) +# @echo 'building pxsm2a' +# $(CXX) -o "pxsm2a" $(OPT_FLAGS) $(SM2A_OBJ) $(CPP_OBJS) $(RATE_OBJS) $(FORT_OBJS) $(CPP_LIBS) -lgfortran + + + +install: + mkdir -p $(PREFIX)/bin && install -m 0755 px* $(PREFIX)/bin + mkdir -p $(MANDIR)/man1 && install -m 0755 man/px*.1 $(MANDIR)/man1 + +uninstall: + -$(RM) $(addprefix $(PREFIX)/bin/, $(PROGS)) + -$(RM) $(addprefix $(MANDIR)/man1/, $(addsuffix .1, $(PROGS))) + +# Other Targets +clean: + -$(RM) *.o *.d px* man/px*.1 + +distclean: + -$(RM) *.o *.d px* man/px*.1 configure config.log config.h config.status Makefile + +check: + python3 run_tests.py + +test: + python3 run_tests.py + +installcheck: + python3 run_tests.py $(PREFIX)/bin diff --git a/src/TEST/AA.fa b/src/TEST/AA.fa new file mode 100644 index 0000000..65cf7a0 --- /dev/null +++ b/src/TEST/AA.fa @@ -0,0 +1,8 @@ +>Sequence5 +MMMMM +>Sequence1 +M-K-K +>Sequence2 +M---- +>Sequence3 +MMMMM diff --git a/src/TEST/AA_interleave.NEX b/src/TEST/AA_interleave.NEX new file mode 100644 index 0000000..19b5f58 --- /dev/null +++ b/src/TEST/AA_interleave.NEX @@ -0,0 +1,31 @@ +#NEXUS + +Begin data; + Dimensions ntax=5 nchar=250; + Format datatype=protein interleave gap=-; + Matrix +TaxonE AWWYHNTLNCRGWGEFRYLTHEFCCHWGNAFYHICHNYDNGPTTERFLTIQTWTARDRWCCKHSVHWNFQENFST +TaxonD HWPYHNEWNQRGWGVFRYLTHEFMCHQHRLFYHICHNYDHGPTTERFKAITTWTAQDRWKSGHSVHGDFQENFCT +TaxonC QVFYATEVNFRDIGSEGFLTCEFLDHFDAHEEKLLHNYVEKPWIEEPLWWRTRKRDDMYFSYHWDFLDFQENFDM +TaxonB QVFYHNEVNCRWINEKGILTHEPLDHFDAHNQHILANNVETPVIYRPLWWRTRKAMDRWFYKTSVHWDFQERFDT +TaxonA QVFTHNEVNCRWHIEKGILTHEPLDHFDAHNHHILANNVETPVIYRPLWWRTRKAMDMWFLKSSMHWDFQENFDT + +TaxonE YGLKQRFQNQHSCNRHIVRQLWNNLRFFICICQIKRGKGNKCQFCILHYFIHLPSLACRLSYAFGYLRHNWFGTL +TaxonD YGMKMRFQNQHSCNRHIGRRLQNNLRFNYCYCQIKRYKGNKCQFVQLKVDIHDKSLAANLIAASMYLRHMWFGPL +TaxonC HAYSMVMPQQHSYRFGEYRQVVNNLYYFNAGPMGHRQKMNNKQGCRMHYFIAYAQAQFNSGYHAEYLKMLSTGGL +TaxonB HGYSMVAPQQQSCNRAEYRQVVNNLRRFIQPQDGHGRKMNVKQGCRMHYFIARASLEFNSGYHAEYLKQLWLGGL +TaxonA MAYSMHAPQQQSKHSAHYRQQVNNLRRFIQPQMGHGRKMNNKQGCRMHYFIAYASLQFNSLYHAEMLKQLWTGGL + +TaxonE TPYGFASPPNWYMRSEPSFGNSWNMAIQIANAFRTWKYRECGYSIKQSCDSTLMWPHRYWMIAQYTFQVTDSRTY +TaxonD TPYGFAVPPNWMMVSGPSFGKSWHMQIQIRNAYVTWKYRGKGYSICQSPQNKLMWPNRYWMIEIYTFIVTDIRTA +TaxonC DLSGESSDPNWAKMSGESEGWSHWVAMLMRNYYRHGKSHGCKMFKHAYESEKLRCIGISSSGDQYCFTVRDSSGY +TaxonB DFSGEKSMLNWAKMSGESEGWSHWVYMLMRNYYRHGKLHGCSHRKEALESEKLRCIGIMRWWKQYAFKVRDISGY +TaxonA DFSGEKSMPNWAKMSGESEGWSHWVLMLMRNYYRHGKLHGCSHRKEILESEKLRRIGIMRWWKQYAFKVRDISGY + +TaxonE DFITSSLVVYAFLCDAQARADCIDQ +TaxonD LFIQISLSEYAFSCDFIPRQDMNWQ +TaxonC RFDACVLECKTSLAACGHNANCGWP +TaxonB RFDRCYLICKTLLYDDGCKANCNWP +TaxonA RFDRGYFGCKTLLNDAGCKVNCNWP + ; +End; diff --git a/src/TEST/Alignment b/src/TEST/Alignment new file mode 100644 index 0000000..ad64086 --- /dev/null +++ b/src/TEST/Alignment @@ -0,0 +1,16 @@ +>Sequence1 +AAATTTCCCTTTCCCTTTAAAAATTTCCCTTTCCCTTTAAAAAATTTCCCTTTCCCTTTAAAAATTTCCCTTTCCCTTTAAA +>Sequence2 +GGGGGGGGGGCCCCCCCCCCGGGGGGGGGGCCCCCCCCCCAGGGGGGGGGGCCCCCCCCCCGGGGGGGGGGCCCCCCCCCCA +>Sequence3 +CCCCCCCCCCCCAAAAAAAACCCCCCCCCCCCAAAAAAAAACCCCCCCCCCCCAAAAAAAACCCCCCCCCCCCAAAAAAAAA +>Sequence4 +TTTTTTTTCCCCCCCGGGGGNNNNNNNNNNNNNNNNNNNNNTTTTTTTTCCCCCCCGGGGGNNNNNNNNNNNNNNNNNNNNN +>Sequence9 +NNNNNNNNNNNNNNNNNNNNAAATTTCCCTTTCCCTTTAAANNNNNNNNNNNNNNNNNNNNAAATTTCCCTTTCCCTTTAAA +>Sequence10 +NNNNNNNNNNNNNNNNNNNNGGGGGGGGGGCCCCCCCCCCANNNNNNNNNNNNNNNNNNNNGGGGGGGGGGCCCCCCCCCCA +>Sequence11 +NNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCAAAAAAAAANNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCAAAAAAAAA +>Sequence8 +NNNNNNNNNNNNNNNNNNNNTTTTTTTTCCCCCCCGGGGGANNNNNNNNNNNNNNNNNNNNTTTTTTTTCCCCCCCGGGGGA diff --git a/src/TEST/Binary_5tax.fa b/src/TEST/Binary_5tax.fa new file mode 100644 index 0000000..c933cbe --- /dev/null +++ b/src/TEST/Binary_5tax.fa @@ -0,0 +1,10 @@ +>TaxonE +0100100100010111001011100101101011010000111110110100000000001110010011101100111001001101001100110001011101011101111101101110111100100010001101010011010001100010001001000100001010101010001000010011100000110110001101001000000000110001000011100100000101 +>TaxonD +1110101101010101001011110101011011010001111010110100000100010110011011111000111101101101001110011001010000011100111101101110011010100011000101011011111001100010011001001110011110100000001001110010100101110100001111001100010001111101010010101100101001 +>TaxonC +0010001001001101111001110110011111110001111111010000011001011010011011101011000101111100011100100001001001011101110011100110110000011001010101111101110111100010001101101100100011100000111011011111001011110111000111001000000100100001101001001110000100 +>TaxonB +0010101000001011111011010110010011100001010100010000010100010101010011101001100100111000000100100001101111101110110011100110110000111001010101101011110111110110001101101100100011100000111111011011011011110111100011001100010100100001101011001111000000 +>TaxonA +0011101000001111111011010110010111100001010100010000010101011101110011101001000110111001100100100001101111111110110011100110110000111001010111101001110111110110001101101100100111100000111111011011111011110111100011001100010100100100101011000101000000 diff --git a/src/TEST/Bollback_2002_MBE.fa b/src/TEST/Bollback_2002_MBE.fa new file mode 100644 index 0000000..dc9b43c --- /dev/null +++ b/src/TEST/Bollback_2002_MBE.fa @@ -0,0 +1,8 @@ +>Seq1 +AAATCCAGGG +>Seq2 +AAACCCAACA +>Seq3 +AATCGGTTCA +>Seq4 +AATCGGTATT \ No newline at end of file diff --git a/src/TEST/Codon.fa b/src/TEST/Codon.fa new file mode 100644 index 0000000..8e63b51 --- /dev/null +++ b/src/TEST/Codon.fa @@ -0,0 +1,8 @@ +>Sequence3 +AAATTTAAATTTAAA +>Sequence1 +ATGAAAAAAATATAT +>Sequence2 +ATGAAATTTAATATA +>Sequence4 +AAATTTAAATTTATA diff --git a/src/TEST/Concat_Sequence1.fas b/src/TEST/Concat_Sequence1.fas new file mode 100644 index 0000000..8ae81a7 --- /dev/null +++ b/src/TEST/Concat_Sequence1.fas @@ -0,0 +1,8 @@ +>Sequence1 +AAATTTCCCTTTCCCTTTAA +>Sequence2 +GGGGGGGGGGCCCCCCCCCC +>Sequence3 +CCCCCCCCCCCCAAAAAAAA +>Sequence4 +TTTTTTTTCCCCCCCGGGGG diff --git a/src/TEST/Concat_Sequence1.phy b/src/TEST/Concat_Sequence1.phy new file mode 100644 index 0000000..7ef0df7 --- /dev/null +++ b/src/TEST/Concat_Sequence1.phy @@ -0,0 +1,5 @@ +4 20 +Sequence1 AAATTTCCCTTTCCCTTTAA +Sequence2 GGGGGGGGGGCCCCCCCCCC +Sequence3 CCCCCCCCCCCCAAAAAAAA +Sequence4 TTTTTTTTCCCCCCCGGGGG diff --git a/src/TEST/Concat_Sequence2.NEX b/src/TEST/Concat_Sequence2.NEX new file mode 100644 index 0000000..9e41ebf --- /dev/null +++ b/src/TEST/Concat_Sequence2.NEX @@ -0,0 +1,16 @@ +#NEXUS +BEGIN DATA; + DIMENSIONS NTAX=7 NCHAR=21; + FORMAT DATATYPE=DNA INTERLEAVE=NO GAP=-; + MATRIX + +Sequence1 AAATTTCCCTTTCCCTTTAAA +Sequence2 GGGGGGGGGGCCCCCCCCCCA +Sequence3 CCCCCCCCCCCCAAAAAAAAA +Sequence9 AAATTTCCCTTTCCCTTTAAA +Sequence10 GGGGGGGGGGCCCCCCCCCCA +Sequence11 CCCCCCCCCCCCAAAAAAAAA +Sequence8 TTTTTTTTCCCCCCCGGGGGA +; +end; + diff --git a/src/TEST/Concat_Sequence2.fas b/src/TEST/Concat_Sequence2.fas new file mode 100644 index 0000000..ca81deb --- /dev/null +++ b/src/TEST/Concat_Sequence2.fas @@ -0,0 +1,14 @@ +>Sequence1 +AAATTTCCCTTTCCCTTTAAA +>Sequence2 +GGGGGGGGGGCCCCCCCCCCA +>Sequence3 +CCCCCCCCCCCCAAAAAAAAA +>Sequence9 +AAATTTCCCTTTCCCTTTAAA +>Sequence10 +GGGGGGGGGGCCCCCCCCCCA +>Sequence11 +CCCCCCCCCCCCAAAAAAAAA +>Sequence8 +TTTTTTTTCCCCCCCGGGGGA diff --git a/src/TEST/Concat_Sequence2.phy b/src/TEST/Concat_Sequence2.phy new file mode 100644 index 0000000..89e5871 --- /dev/null +++ b/src/TEST/Concat_Sequence2.phy @@ -0,0 +1,8 @@ +7 21 +Sequence1 AAATTTCCCTTTCCCTTTAAA +Sequence2 GGGGGGGGGGCCCCCCCCCCA +Sequence3 CCCCCCCCCCCCAAAAAAAAA +Sequence9 AAATTTCCCTTTCCCTTTAAA +Sequence10 GGGGGGGGGGCCCCCCCCCCA +Sequence11 CCCCCCCCCCCCAAAAAAAAA +Sequence8 TTTTTTTTCCCCCCCGGGGGA diff --git a/src/TEST/Concatenated.fa b/src/TEST/Concatenated.fa new file mode 100644 index 0000000..6c3f9f4 --- /dev/null +++ b/src/TEST/Concatenated.fa @@ -0,0 +1,16 @@ +>Sequence1 +ACGTACGTACGTACGTACGTACGTACGTACGTACGTACGTA +>Sequence2 +AAAACCCCGGGGTTTTAAAACCCCGGGGTTTTAAAACCCCG +>Sequence3 +ACGTTGCAACGTTGCAACGTTGCACGTGCAACGTACGTACG +>Sequence4 +TTTTTTTTCCCCCCCGGGGGNNNNNNNNNNNNNNNNNNNNN +>Sequence9 +NNNNNNNNNNNNNNNNNNNNAAATTTCCCTTTCCCTTTAAA +>Sequence10 +NNNNNNNNNNNNNNNNNNNNGGGGGGGGGGCCCCCGCGCGA +>Sequence11 +NNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCAAAAAAAAA +>Sequence8 +NNNNNNNNNNNNNNNNNNNNTTTCAGCACCCTGTGGGGGGA diff --git a/src/TEST/DistMatTest.fa b/src/TEST/DistMatTest.fa new file mode 100644 index 0000000..813dd87 --- /dev/null +++ b/src/TEST/DistMatTest.fa @@ -0,0 +1,16 @@ +>Seq1 +ATATATATATATATCCCATATA +>Seq2 +A---TAATTAAATATACCTATA +>Seq3 +CTATATATTTTCCCCCATATAT +>Seq4 +ATATATATATATATCCCCCCCC +>Seq5 +ATATATATTTTCCCCCATATAT +>Seq6 +ATATATATTTTCGGGCATATAT +>Seq7 +ATATATATTTTCCCCCATAGGG +>Seq8 +ATATATATATATATATATATAT diff --git a/src/TEST/Full_Mito_Sci_Names.fa b/src/TEST/Full_Mito_Sci_Names.fa new file mode 100644 index 0000000..3c4cf45 --- /dev/null +++ b/src/TEST/Full_Mito_Sci_Names.fa @@ -0,0 +1,1444 @@ +>Neofelis_nebulosa_Clouded_leopard +----MNENLFASFTTPT-MMGLPIVVLIIMFPSILFPSPN-RLVNNRLVSLQQWLVQLTSKQMLAIHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRRKTKASLAHFLPQGTPGPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGAALALMN-ISTPVALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFVTIVSMI-MTLFIVFQLKISKHLYLS-NPEPK-PMAMLKQ-PNP-W-EKKWTKIYSP-LS-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKVHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFMVWEAFASKREVAMVELTSTNLEWLHGCPPPYHTFEEPTYVLS-K--------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAIPSLGLKTDAIPGRLNQTTLMGTRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFDKWSMSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHHNSMLLLTLGMTTNLLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALLITISLGIYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLVVCFLRQLKYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYMHVGRGMYYGSYTFSETWNIGIVLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGADLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGMVSDSDKIPFHPYYTIKDILGLLVLILALTLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLAIIPALHTSKQRGMMFRPMSQCLFWFLVADLLTLTWIGGQPVEHPFTTIGQLASILYFFTLLVLMPISGMIENRLL---KW--------MF--------MIYILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSMFMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLATLITTQEYIWLIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMLTTMLFFGAFHSPYMPELHTINFTVKTLLLTTTFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPIITASI-P-PQT--MKP-PIFIIIMLTVISGTMIVLTTSHWLMVWIGLEMNLLAIIPVLMKKHNPR-ATEAATKYFLTQATASMLLMMGIIINLLHSGQW--AMSKNLNPVASAMMTAALAMKLGLAPFHFWVPEVTQGISMSSGLILLTWQKIAPLSVLYQISPTINPDLLLTM-ATMSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMVYSPTMMILNLMIYITMTLATFMLFMHNSTTTVSSL---SQTWNKTPLVTLLILTLMMSLGGLPPLSGFIPKWMIIQELTKNEMIMMPTLLAMTALLNLYFYMRLTYTTTLTMFPSSNNMKMKW-RFEHTKKMIFL-------PPLIVISTMLLPLTPMLSILD---MN-VMLALLTNTLLSTLLVLIAFWLPQSNIYAEKVSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLPTMLSMALLLISLLAASLAYEWTQKG--LEWTE-MSTVYINIFLAFTMSLMGLLMYRSHLMSSLLCLEGMMLSLFIMMTVAILNNHFTLASMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTAMLMPMTWLSKPNMIWINSTIYSLLISLISL-SYLNQLGDNSLNFS-LLFFSDPLSAPLLVLTTWLLPLMLMASQSHLSKETLTRKKLYITMLTTLQLLLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALLYIQNTTGTLNFLIIQYWAKPIS-TTW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-TTNQMAYPFMMLSLWGMVMTS--SVCLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTILPLMAAWWLLASLANLALPPTINLIGELFVVMASFSWSNMTIILMGTNIIITALYTLYMLITTQRGKHTHHIKNINPSFTRENALMTLHLLPLLLLSLNPKTVLGPIY------MNLFTSL-TLTAMFILLLPIIMS---NTQLYKN-SLYPHYVKTT-ISYAFTISMVPTMMFISSGQETIISNWHWLSIQTLKLSLSFKLDYFSIIFIPVALFVTWSIMEFSMWYMHMDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFITAMAWFLANLNAWDFQQIFIVQHE-NLNIPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLTEQNKTMQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKPMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-LTAAYSTRIMFFTLLGQPRFNPLSPINENNPYLINSIKRLLIGSIFAGYLISYNIPPTTIPQMTMPYYLKLTALAVTITGFILALELNLATKNLK--FKYPSNLFKFSSLLGYFPIVMHRLPSTMSLTMSQKSASMLLDMIWLENVLPKSISYFQMKMST--IVSNQKGLVKLYFLS---FMITL--TLSLLLL----------NFHA---- +>Chiropotes_albinasus_ +----MNQNLFASFNIPI-ILGIPMVTLVILFPAMLLAPPN-NLINNRLSSLQQWLIQLTLKQMMITHTTKGRTWSLMLLTLITFIALNNLLGLTPYAFTPTTQLSMNLGMAIPLWTATVLVGLRFKTKSSLAHLLPQGTPTPLIPILIIIETISLFIQPVALAVRLTANITAGHLLMHLLGSTSLTLLS-IYLSSSLVTIIVIILLITLELGVALIQAYVFTLLVSLYLHNNTMPQLEISSWPMVILSMV-VALFYFIQMKMLNFTFYI-NPPSN-NMKNHKH-KTT-W-QLKWTKIYSP-LS-TSLLS---MFMNRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRAELGQPGSLMEDDHIYNVIVTSHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTTMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIISSVGSFISLTAVILMIFMIWEAFSSKRKVLTVEQPHTNLEWLYGCPPPYHTFEEATYVKSLSEKG-----MAHPAQLGLQNAASPIMEELIAFHDHALMIIFLISSLVLYTISLMLTTKLTHTSTMNAQEIEMIWTILPAIILVMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYEDLAFDSYIVPTYFLEPGEFRLLEVDNRTTLPMEADIRMLISSQDVLHSWAVPSLGIKTDAIPGRLNQAMVASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWASYLYIV--------MTHQSHAYHMVNPSPWPLTGALSAFLLTSGLIMWFHFYHTLLLYTGLLASAMTMFQWWRDIVREGTYQGHHTPPVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPQTGGHWPPTGILPLNPMEVPLLNTAVLLASGVTITWAHHSLMESDQEESAQALSLTIALGAYFTYLQMSEYSEASFTISDGIYGSTFFMATGFHGLHVIIGTTFLITCYFRLQMDHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTATRKTHPLMKIVNTSFIDLPTPPNISSWWNFGSLLGICLITQIITGLFLAMHYTSDSSTAFSSVAHITRDVNYGWMVRYLHANGASLFFMCLFLHIGRGLYYGSFLFLNTWNIGIILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPDLVQWIWGGFSVDKATLTRFFTFHFILPFIIAALASIHLLFLHDTGSNNPSGLTSDPDKVSFHPYYTIKDILGLIFLLLLLMSLTLFMPDLLTDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLIHLSKQQSMAFRPISQGLFWTLVADLFTLTWIGGQPVEHPFIYIGQTASTLYFFII-TTIPLLTLIENKLL---KW--------MP--------MINLLLLTIPILIAMAFLTLMERKILGYMQLRKGPNIVGPYGLLQPIADAMKLFTKESLLPTTSTMTMYIMAPALALSIALLLWTPLPMPYPLVNLNLGLLFMLAMSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLHSLITTQEHSWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFLATPYTPTMPELYSIYFVTKTLMLTALFLWIRTAYPRLRYDQLMHLLWKKFLPLTLALCMWYISMPTLTASI-P-PQT--MNP-LAHLITSLTILMGTMIAILSSHWFLIWMGLELNMLSIIPMLAKSMNPR-STEAATKYFLIQATASMILLMAIILNNLLYGQW--TINPSLNQTLSTMMLVAITMKLGMAPLHFWLPEVVQGIPLIPAMLILTWQKLAPMSIIIQIFPSINTNIILMT-SILSIMIGSWGGLNQTQLRKILAYSSITHMGWMMAILYYNPNITILSLFIYLLLTTSTFMIFYLNSNVTTLSM---SHTWNKLTWMMPTITLIMLSLGGLPPLTGFSPKWAIMQELTKNNNLIIPLIMAMLTLMNLYFYMRLTYSISMTMFPTSNSTKINW-QLKHMKLSPLL-------PPLTVSSLSLLPLTPLMLVS----MN-LALTLITNILLAVLLTTIAFWLPQLNTYTEKYNPYECGFDPTTSAHLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNLMLTINMVLTLIIVLVVGLAYEWTQKG--LDWIE-MHFIYINTALAYFMSLLGLLIYRSHLMSSLLCLEGMMLSLFIMTTLMILNLHSTLMFITPIALLVFAACEAAVGLALLVLISNLYGLDYVQNLNLLQCMLKIIFPMMMLLPMMWLSKNYMAWINMMTWSLLISALTL-LPLYLPN-NSHYLS-SVFFLDSLASPLLALTAWLLPLMVLATQQHLYNNPPPRKKLYISMLIFLQMSLIMTFTATELILFYVLFETTLIPTLIIITRWGYQPERLNAGSYFLFYTLAGSLPLLITLLYYSNSLGSLNILTTMITTKEML-LSW-----TNSATWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITPILNP-LTEKMNYPFLILSLWGMTMTS--AMCLRQADLKSLIAYSSVSHMALVILAILIQTPWSFAGAMILMIAHGLTSSLLFCLANSNYERIHSRTMMFTRGLQTLFPLLALWWLLANLANLALPPTMNLMGELLTIMASFSWSNFTIMFTGLNMLITALYSLHMFTSTQRGPLTYSTNNIKPLFTRENTLMLMHVTPMFLITLNPKVIMGLML--------MHSSM-ILMTLIPLLTPVIIS---LIKPYKI-FLYPHYVKLA-IIYALIISILSTTMYVFTGQEHMISNWHWTTIQTIKLSISFKLDFFSMMFTPVALFVTWSIVEFSMWYMSSDPDINKFLKYLLIFLVTMLILVTANNLFQLFIGWEGIGIMSFLLISWWYGRADANTAALQAILYNRIGDIGLIMAMTWFLLHSNSWELQQMFMLDPA-PNSLPLVGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLIIRLHPLFEKNLSVQTLMLSIGAITTLFTAICALTQNDMKKIVAFSTSSQLG--LMMVTVGINQPHLAFLHICTHAFFKAMLFLASGSIIHSLNNEQDIRKMGGLFKTLPFTSSSIIIGSLALMGMPFLTGFYSKDLIIETANTSYTNAWALMITLVATS-LTAMYSIRIIFFTLTEHPRFNNLILINENNPLLMKPINRLAMGSIFAGFLISNCAPPMTHPQVTMPQYLKLTALGVTISGLLMAMELSLMTNNMK--LSLPVKTYYFSNMLGFYSTTTHRSNPYSSLAMSQNVTSALLDMFWLEKSMPKMTATTQTSISV--TTSTQKGLIKLYFLS---FLIPP--AFALLLTI----------------- +>Anomalurus_sp__GP_2005_scaly-tailed_squirrel +----MNENLFSSFIAPS-MMGLPIIILIILFPIILFKTPT-RLMNNRLISLQMWLIKLVTKQMMTIHNKKGQTWSLLLMSLITFISSTNLLGLLPYSFTPTTQLSTNLAMAIPLWAGTVLVGFRHKTKSSLAHFLPQGTPTPLIPMLIVIETVSLLIQPMALAVRLTANITAGHLLMHLIGSATLGLMT-ISLPTATITLILLILLTVLELAVAFIQAYVFTLLVSLYLHDNTMPQLDTSTWLITIISTI-ITLFIFFQMKIITFNFLQ-KPEIK-NLKIYTT-KTP-W-ENKWTKTYSP-PS-LPPQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTIGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDMWAKIQFIVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNMVSSMGSFISLTAVILAVFMVWEAFASKREVATVELSSTNLEWMYGCPPPYHTFEEPAYVKI-N--------MAQPSQLGMQDASTPIMEELSFFHDHTLMIIILISAMVLYIITLMLTTKLTHTNVTDAQEVEIIWTILPAIILIAIALPSLRILYVMDEVYDPSMTMKALGHQWYWSYEYTDFEKLCFDSYMTPSSDLLPGEYRLLEVDNRVVLPMEVPIRLLVTSEDVLHSWAVPSLGLKIDAIPGRLNQITLLATRPGLYYGQCSEICGSNHSFMPIVLELVPYHHFQAWTVTLLMPQLDTSTWLMTHQTHPYHMVNPSPWPLTGALSALLLTSGLALWFHFNLTTVLIMGMLANLMTMYQWWRDVVRESTYQGHHTFNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTHDLGGSWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMQGNRTQMIQALSITIILGLYFTLLQTSEYFETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLTYHFTSQHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGSY-MTNTRKTHPLTKIINNSFIDLPTPSNISSWWNFGSLLGLCLITQIITGLFLSMHYTPDTSTAFSSVAHICRDVNYGWLIRYLHANGASMFFICLFVHAGRGLYYGSYMLKETWNIGVILLLITMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNIVEWIWGGFSVDKATLNRFFAFHFILPFIIAALAMIHLLFLHETGSNNPSGLSSDSDKIPFHPYFTIKDILGVIVLATILMLLVLFSPDILGDPDNYIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVIALAASILILMTMPIIHNSKQRSLMFRPFSQFTFWILVADLLTLTWIGGQPIEYPFMTIGQLASTLYFSSILILMPTTSMLENKLL---KW--------ML--------IFNLLLVIVPVLLAMAFLTLAERKMLGYMQLRKGPNIIGPFGLLQPFADALKLFLKEPLRPLTSSMFLFMLSPTLALTIATTMWTPLPTPMPLANINMGMLFILATSSLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVLSILMFNGSFNLTTLMITQEFMWMITFSWPLAMMWYTSTLAETNRTPFDLMEGESELVSGFNVEYAAGPFALFFMAEYTNIITMNALTSSLFLGSSYQLFKSEYFTMTFSSKITCLTMTFLWVRASYPRFRYDQLMHLLWKNFLPMTLAMCAWHTIVPIILSCI-P-PQT--MNP-LTHSTILFTLMSGTAIVMTSSHWLLTWAGLEMSMLSIIPLMANNNNPR-STEASAKYFLIQATASMVLMMAIISNFYLTGHW--MITTDMNFTTSTMVTMALLMKLGLAPFHFWMPEVTQGTSLPSGMLLLTWQKIAPMTILVQISPSINQNLILTS-ALLSILLGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNPTLAMLNLLIYVMLTATLFMLFMLNSNTTILSL---TLLWNKKPAILLISSIALMSLGGLPPLMGFLPKWLIIQELVKNQNIILPTVMSMMALLNLYFYMRLMYSMSMTMFPSINNLKMSW-QHSNKKNNSLL-------PLLFVLSTMSIPLAPILYIMD---MN-MILILLTNTSIMMILVTMAFWLPQLYSSQEKLSPYECGFDPMGSARLPFSMKFFMVAITFLLFDLEIALLLPLPWASQTNYLNLMALTALALISILALGLAYEWYQKG--LEWNEYMSLIYINMILAFTVTLLGVMIYRSHLMSSLLCLEGMMLSVFTFGTLVILNSFHILSFMLPITLLVFAACEAAIGLALLVMVSGSYGLDHVKNLSLLKCMLKIIIPTIMLIPMTWCSKNNMIWINSSMYSLVISLTCM-LTLSQNQLYGLNFS-QTFSSDHLSTPLLMLTTWLLPLMIMASQNHLSKESSIRKKLYITMLILLQAFLIMTFSATELTLFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLIALTYLYNSLYSLNFLLFFYQYKLTY-LSW-----SHSMLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLNLGGYGMMRISLILDP-MTESMSYPFILLSLWGMVMTS--AICLRQTDLKSLIAYSSVSHMALVIVAIMIHTPLSYMGAPALMIAHGLTSSMLFCLANSTYERTHSRTMILARGLQTMLPLMASWWAMASLSNLALPPSINLMGELLVMLASFSWSKPTIILTGLNMTITALYTLYMFITTQRGKLTYNTNNMTPSFTRENSLMLMHLLPLLLLSINPKLILGTMY------MNLFFSS-ILMTLTLLVTPITLI---PTPIYKS-TSYPAYTTSL-IKLAFTLSLVPMMIFLNSGQETIISNWHWVSMQNTKLMLSFKLDYFSMVFIPVALFVTWSIMEYSLWYMNSDPNINRFFMYLLTFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAAMQAILYNRIGDIGLVLSMAWFLTNLNSWELQQMFMLNEK-ISTLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHHLTTNNITILNMMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGMNQPHLAFMHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLAKSMPITTSSLITGSLALTGMPFLTGFYSKDLIIESINTSYTNAWALMITLIATS-MTAAYSTRMIFFALLGQPHFPPLIIINENSTPLINPIKRLLMGSILAGYLITNNLNPMNIPQLTMPIYLKFTALTITLIGFTIAMELAMLSFTLK--TNSTSKLFNFSTMLGYYPSIMHRSQPQLNLNISQNVSSILIDSTWLEKLIPKNISTNHMHAST--YTSNQKGLIKLYFLS---FLTSS--TLSTIMII----------------- +>Ovis_vignei_urial +----MNENLFASFITPM-MFGLPLVTLIVLFPSLLFPTSN-RLVSNRLISLQQWMLQLVSKQMMSIHNTKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-INTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYH-NPELV-TTKTPKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRYHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTPDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGAILLILILMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVMMPVASIIENNLL---KW--------MF--------MINVLTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IILIIILMTVMLGTIIVMISTHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPMASMLMTTALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTL-SILSITIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKAPTMTVLVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPTTKRMTLL-------PTMTVLSTMLLPLTPILSILE---MN-LMITLLTNFTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFILATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINTTLHSLLISLTSL-LLLNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLARKKLFISMLILLQLFLIMTFTATELIFFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTMGSLNFLILQYWVQPMP-NSW-----SNTFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITLLLNP-ITDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKHTHHINNILPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-TLVTLILLTAPIAAI---NFNIHKS-TNYPLYVKTT-ISCAFITSMIPTMMFIHTGQEMVISNWHWLTIQTLKLSLSFKMDFFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLINLNTWDLQQIFMLNPN-DSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLAQSIMLCLGAMTTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLININENNPFLINSIKRLLIGSLFAGFIISNNIPPMTIPQMTMPHYLKMTALTVTILGFILALEISNTTHYLK--FDYPSNTFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLETILPKTISLAQMKMST--TITSQKGLIKLYFLS---FLITI--LISTTLL----------NFHE---- +>Macaca_thibetana_Pere_Davids_macaque +----MNENLFTSFSTPT-ILNQPATIPIILLPTLLILTSK-HPANNRLATIQQNLIQLALKQMMATHNAKGQTWSLMLMSLVTFIAMTNLLGLLPYSFTPTTQLSMNLAMAIPLWAGTVMLGFRFKAKNSLAHLLPQGTPTPLIPMLVVVETMSLLIQPMALAVRLTANITAGHLLMHLVGNAVLALST-TNFPMTLLTSTLLVLLTALEIAVALIQAYVFTLLISLYLRNNTMPQLDTSTWFTTIMTTL-PTLYLIMQLKLLNMNHYQ-PPLAK-NSNLQPR-NTH-W-QPKWTKTCLP-LS-QPQQS---MLINRWLFSTNHKDIGTLYLLFGAWAGVMGTALSLLIRAELGQPGNLLGNDHIYNVVVTAHAFIMIFFTVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASAVVEAGAGTGWTVYPPLAGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPALSQYQTPLFVWSILITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGMVSHIVAHHSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMFWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTCAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSFISLVAVILMIYMIWEAFASKRKVLLIEQPLTSLEWLNGCPPPYHTFEEPTYIKL----------MAHPVQLSLQDATSPIMEELITFHDHAFMAMSLISFLVLYALLSTLTTKLTNTNITDAQEMETIWTILPAIILILIALPSLRILYLTDEVNDPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHAYHMVKPSPWPLTGALSAFLMTSGLVMWFHFYSTTLLMLGLLTTMLTLYQWWRDIVRESTYQGHHTMPVQKSLRYGMTLFIISEVFFFIGFFWAFYHSSLAPTPCLGGHWPPTGIIPLNPLEVPLLNTSVLLASGVTITWAHHSLMNNDRKQTIQALLITILLGTYFTLLQISEYFEAPFTISDGIYGSTFYITTGFHGLHVIIGSTFLSTCLIRQLLYHFTSSHHFGFEAAAWYWHFVDVVWLLLYVSIYWWGS--MTPMRKSNPIMKMINRSLIDLPTPPNLSMWWNFGSLIAACLVLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWVTRYLHANGASMLFICLFLHVGRGLYYGSYLLLETWNIGIMLLLLTMTTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWIWGGYAIDSPTLTRFFTLHFILPFIIVALTTVHLLFLHETGSNNPCGISSNSDKIAFHPYYTIKDALGLILLLFVLATLTLLSPNLLNDPDNYIPADPLNTPPHIKPEWYFLFAYTILRSVPNKLGGVLALFLSIFILAAIPMLHKSKQQSMMFRPLSQFLFWLLITILLTLTWIGSEPVTQPLITIGQMASMMYFATILILMPLVSLIENNLL---KWT-------MT--------TVNLLLLTASTLTAMAFLTLVERKLLGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPSTSTTTLYIIAPALAFFITLLLWTPLPMPNALINFNLGLLFTLAMLSLIVYSILWSGWASNSNYALIGALRAVAQTISYEVTLTIILLSTLLTSGSFNLNTLITTQEHLWLLLPSWPLAMMWFASTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFLGTFYPIHSPELFTACFTIKTLFLTSLFLWIRAAYPRFRYDQLMYLLWKNFLPLTLALLMWSISTPIAISSI-P-PQT--MNP-LAQPIIYTTMITGTLITMLSSHWFLAWAGLEMNMLAFIPILMKKTNPR-SAEAATKYFLMQSTASMILMMAIISNNLLSGCW--TTTSYIDQPSSLMMTIALAMKLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQIHPSINTHTLLTL-SILSIAVGSWGGLNQTQLRKILGYSSITHMGWMMMTLVYNPTTTILYLTIYIILTTTMFLTLNLNSSTTTLML---SRTWNKSAHLAPLTAPILMSLGGLPPLTGFLPKWIIIQELTMNNNFLIPSIMTIMTLLNLYFYMRLIYTTSLTLLPTPNNTKMTW-QLENTKPTPLI-------PLLIITSTLLLPISPLMLTTH---MN-LALALTINTLLTLLLMIIMFWLPQLNSYTEKTSPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLSLPWAIQTTNLPTMIKSTIAFIIILILSLAYEWTQKG--LDWVE-MTPTYMNVMLAFAISLLGMLTYRSHLVASLLCLEGMMMSLFIMTALIASNTHSPLINIMPIILLVFAACETAVGLALLISISNTYGLDYVHNLSLLQCMLKMITPMAMLLPMTWLSKNDTIWINLTMHSLAISLIPL-LFLNQTNTNLLNYS-TYLSSDPLTTPLLTLTIWLLPLMIMASQYHLCNEPPSQKKLFLFMMILLQITLILTFMATELIMFYILFEATLIPTLIIITKWGSQAKRLDASTYFLFYTLTGSLPLLIMLSHTYNNTGSLNITLLTLTNQKLT-TTW-----SHSFTWLACMMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTPILDP-LTEYMAYPFLMLSLWGMIMTS--LTCLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFSGAVILMIAHGLTSSMYFCLANSNYERTHSRTMLLSRGLQILLPLMTFWWFTASLTNLALPPTINLLGELFVITTSFSWSHITIMLTGLNMLITALYSLHMFTTMQRGALTHHMINMKPPFTRENMLMFMHLAPIILLSLNPNIILGFTS------MTMYSPI-MMTTLISLTLPIFAA---LINPYKK-RPYPDYVKMT-VMYAFITSLSSTTLFIFLNQEMTIWSWHWVMTQTLNLTLSFKLDYFSMTFIPIALFITWSIMEFSLWYMNSDPNINQFFKYLLIFLTAMLILVTANNLFQFLIGWEGVGIMSFLLISWWHARTDANTAAIQAILYNRIGDIGLILAMAWFLLHYNSWDLQQVLALNSN-SSSLPLAGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMETNTLIQNLTLCLGAITTLFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKAMPLTSTSLIIGNLALTGMPFLTGFYSKDLIIEATNTSYTNAWALFITLIATS-LTSAYSTRTILLTLTGQPRFPALTNINENNPALLNPIKRLTMGSMITGFLITNSIPPTSLPQPMMPLYLKLSALCTTALGFLAALDLTLMTNKLK--MKNPTQMFKFSNMLGYFPTTIHRTIPYQNLLMGQNLALLLLDSAWLEKSMPKMISQTHITASM--TVTTQKGMIKLYSLS---FLIPL--TLALFLMM----------------- +>Neophocaena_asiaeorientalis_ +----MNENLFAPFVVPV-MLGIPITTLIIMFPALLFPTPN-RLITNRMVAIQQWLTKLTSKQLMITHNLKGQTWSLMLISLFLFIASTNLLGMMPHSFTPTTQLSMNLGMAVPLWAGTVVMGFRNKMETSLAHLLPLGTPTFLIPMLVMIETISLFIQPLALAVRLTANITAGHLLLHLIGSATLALTS-ISLPTALITFIILTLLVILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMI-FTLFALLQLKISKHLYSP-TPKPT-PTKMQEQ-QAP-W-NHTWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGSLIGDDQIYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSVVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDVILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWTKTQFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFITWEAFTSKREVLTVDLTSTNLEWLNGCPPPSHTFEEPTYVNP-NDQE-----MAYPFHLGFQDATSPIMEELLHFHDHTLMIIFLISSLVLYIITMMLTTKLTHTSTMDAQEVEMVWTILPDTILILIALPSLWILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMVLPMQMTIQMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYEQCSEICGSNHSFMPIVLELVPLENFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLVMWFHFNSAILLTLGLLTNTLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPAGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHTLQALLITIMLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIICFMRQLTFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNALIDLPAPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTSTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYIHIGRGLYYGSYMFQETWNIGVLLLLMVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGSTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALMIVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGILLLILTLLTLTLFSPDLLGDPDNYVPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILVLVPMLQTSKQRSMMFRPFSQLLFWTLIADLLTLTWIGGQPVEHPYIIVGQLASILYFLLILVLMPTASIIENKLL---KW--------MF--------MINILMLILPILLAVAFLTLVERKILGYMQLRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPVLALTLALTMWAPLPMPHSLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLSTTQEKLWLLFPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGTSHNPHMPELCTMNLIIKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMTAGI-P-PQA--MNP-LISITLLMTLILSTMIVMISSHWLFAWIGLEMNMMAIIPIMMKKPSPR-ATEASTKYFLTQATASTLLMLAVILNLMHSGQW--TIMKLFDPTASALMTMALAIKLGLSPFHFWVPEVTQGIPLTTGLILLTWQKIAPISILYQISPSINLHLMITM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTSILLYNSTLTLLNLLIYIIMTFTMFMLLIQNTTTTTLLL---SQTWNTTPVMTTFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPTLMAVTALLNLYFYMRLAYSTALTLFPSTNNMKMKW-QFHPTKQMTLL-------PTAIVLSTMLLPLTPTYYILL---MN-FLLTLLTNTTLALLLMLIAFWLPQLNTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLKTMLLMTLFLISLLAASLAYEWTQKG--LEWDK-MSLVHINILMAFTMSLTGLLMYRSHLMSALLCLEGMVLSLFILMTLTILNSHFTLANMAPIILLVFAACEAAIGLALLVMISNTYGTDHVQNLNLLQCMLKFIIPTIMLMPLTWLSKNSFIWINTTTHSLLISFTSL-LLLNQFNDNSLNYS-SMFFSDPLSTPLLMLTMWLLPLMLMASQSHLLKEPLTRKKLYITMLIVLQTLLIMTFTAMELIMFYIMFEATLIPTLIIITRWGSQAERLNAGLYFLFYTLMGSLPLLVTLTYLQNTLGTLNFLLLQYWTQPLP-TSW-----SNIFMWLACMVAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTGHMAYPFLALSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVIAAILIQTPWSYMGASALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQIFFPLMAAWWLLASLTNLALPPTINLIGELLVIMSTFSWSNLTIILMGTNVVITALYSLYMLIMTQRGKHTHHINNLTPSFTREHALMALHIIPLLLLSLSPKIILGPLY------MDLFTSS-TLLTLLMLITPIMAS---STNLYKN-SNYQHYVKNM-TLSAFIISLIPMTMFIHTNQEMLISNWHWITIHTFKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPNINQFFKYLLIFLITMLILVTANNLFQLLVGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLSNTNSWDLQQIFVLSQN-PSNLPLMGLTLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFSPLMENNKPIQTMMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTVGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALITGCLALTGVPFLTGFYSKDPIIEAATSSYTNAWALLLTLIATS-LTAVYSTRIIFYTLLEQPRFSPLMNINETNPALINPIKRLLVGSIFAGFILSNNMPPMTTPLMTMPLHLKLTALMVTTLGFIIALEINTYSKNLK--YPHLSNFTNFSTLLGYFPTIMHRLPPHLILTMGQKLATSLLDLTWTEIILPKTMTSIQLKASL--LTSNQKGLIKLYFLS---FLITM--TLVMLLF----------NYPE---- +>Monodon_monoceros_narwhal +----MNENLFTPFTIPM-MLGIPITTLIIMFPTMLFPTPN-QLINNRMITIQQWLTKLTSKQLMNTHNPKGQTWSLMFISLFLFITSTNLLGMLPHSFTPTAQLSMNLGMAIPLWAGTVVMGFRNKTKISLAHLLPLGTPTFLIPMLVMIETISLFIQPLALAVRLTANITAGHLLLHLIGSATLALVN-ISLFTALITFTILTLLTILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMI-LTLFALLQLKISKHFYPP-SPKPT-PTKLQKR-QTP-W-NCTWTKIYLP-LS-QSQ-----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGSLIGDDQIYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDVILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNSTWTKIQFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVDLTSTNLEWLNGCPPPYHTFEEPAYINS-KGS------MAYPFQLGLQDATSPVMEELLQFHDHALMIVFLISSLVLYIITLMLTTKLTHTNTMDAQEVETIWTVLPAIILITIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMVLPMQMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLGDFEKWSMSTL----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSLILLALSLLTNTLTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFILSEALFFMGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHTLQALLITIMLGLYFTLLQASEYYEASFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFMRQLTFHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTNIRKTHPLMKILNSTFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLYTHIGRSLYYGSHTSQETWNIGVLLLLMIMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVEWIWGGFSVDKATLTRFFTFHFILPFIITALVAVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDMLGAFLLILVLLAMTLLTPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILLLIPMLQTSKQRSMMFRPFSQLLFWTLIADFLTLTWIGGQPVEHPYIIVGQLASILYFLLILVLMPMASLIENKLL---KW--------MF--------MINILMLILPILLAVAFLTLVERKILGHMQLRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPVLALTLALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGGLRAVAQPISYEGTLAIILLSVLLMNGSFTLSTLNTTQEKLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYTNIIMMNMFTTILFLGAFHDPHMPELCTMNLIAKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHVSLPIMTASI-P-PQT--MNP-FISIMLLSTLILSTMIVTISSHWLFAWIGLEMNMMAIIPIMMKKPTPR-ATEASTKYFLTQATASALLMLAIIINLMYSSQW--TIMKLFNPTASILMTMALAIKLGLAPFHFWVPEVTQGIPLTTGLILLTWQKLAPISILYQISPSINLHLMVTM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILLYNPSLTMLNLLIYIIMTFTMFTLLAQNSTTTTLLL---SQTWNTMPIMTTFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNESLLLPTLMAITALLNLYFYMRLAYSTALTLFPSTNNMKMKW-QFYPTKQMTLL-------PTAIVLSTMLLPLTPMFFILL---MN-FLLTLLTNTTLALLLMSIAFWLPQLNTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLTNMLPTTLLLISLLVASLAYEWSQKG--LEWDK-MSLVHINILMAFTMSLTGLLMYRSHLMSALLCLEGMVLSLFILATLTILNSHFTLANMMPIILLVFAACEAAIGLALLIMISNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKNNFIWVNTTTHSLLISFTSL-LLLNQFNDNSLNYS-LTFFSDSLSAPLLMLTMWLLPLTLMASQSHLTKEPLTRKKLYITMLITLQTLLIMTFTATELIMFYITFESTLIPTLIIITRWGNQPERLNAGLYFLFYTLMGSLPLLVALTYLQNTLGSLNFLLLQYWAQPLP-ISW-----SNTLMWLAYMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILSP-MTEHMAHPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAALIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQIFLPLMTTWWLLACLANLALPPTINLIGELLVITSTFSWSNLTIILMAMNILITALYSLYMLITTQRGKHSHHINNLTPSFTREHTLMALHIIPLLLLSLNPKIILGFLY------MNLFTSS-ILLTLFMLTTPIMAS---STNFYKS-NKYQHYVKNM-TLLAFIISLIPTTMFIHTNQETLISNWHWITIHTLKLSLSFKMDYFSLMFMPVALFITWSIMEFSIWYMHSDPNINQFFKYLLIFLITMLILTTANNLFQLFIGWEGVGIMSFLLIGWWFGRSDANTAALQAILYNRIGDIGFLLSMTWFLSNMNTWDLQQIFMLDQN-SSNIPLMGLTPAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNKPVQTMVLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALITGCLALTGMPFLTGFYSKDLIIEAATSSYTNAWALLLTLIATS-LTAIYSTRIISLTLLEQPRFPPLMSINETNPLLINPIKRLLIGSIFAGFILSNNMPPMTTPLMTMPLHLKLTALMMTILGFILAFEINTYSKNLK--YPHPSNATNFSTLLGYFPTIMHRLPPHLVLTMSQKLATSMLDLTWTEAILPKTTAYIQLKASL--LTSNQKGLIKLYFLS---FLITM--TLTLLSF----------NYLE---- +>Macaca_silenus_liontail_macaque +----MNENLFTPFSTPT-ILNQPATIPIILFPTLLVLTSK-HPINNRLTTIQQNLIQLALKQMMMTHNAKGLTWSLMLMSLITFITTTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVIMGLRFKTKNSLAHLLPQSTPAPLIPMLVMIETISLLIQPMALAVRLTANITAGHLLMHLVGNAVLALST-ISFPLTLLTSMLLTLLTILEIAVALIQAYIFTLLISLYLHNNTMPQLDTSTWFTTIMTML-LTLYLIMQLKLLNMNPYQ-LPLTK-NPSLQTH-STR-W-QPKWTKTCLP-HS-QPQQF---MLINRWLFSTNHKDIGTLYLLFGAWAGVMGTALSLLIRAELGQPGSLLGNDHIYNVIVTAHAFIMIFFTVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASAVVEAGAGTGWTVYPPLAGNFSHPGASVDLIIFSLHLAGISSILGAINFITTIVNMKPPAMSLYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGVVSHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGLVHWFPLFSGYTLNQTCAKAHFIVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSFISLVAVILMIYMIWEALASKRKVLLIEQPLTSLEWLNGCPPPYHTFEEPTYIKL-NEKGESRTPMAHPAQLNLQDATSPIMEELATFHDHAFMAMLLISSLVLYALLSTLTTKLTNTNTTDAQEMETIWTILPAIILILIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWAIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHAYHMVKPSPWPLTGALSAFLMTSGLIMWFHFYSTTLLMLGLLTNTLTLYQWWRDIVRESTYQGHHTTPVQKSLRYGMALFIISEVFFFAGFFWAFYHSSLAPTPCLGSHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMNNDRKQTIQALSITILLGTYFTLLQISEYFEAPFTISDGIYGSTFFITTGFHGLHVIIGSTFLFICLIRQLLYHFTSNHHFGFEAAAWYWHFVDVVWLLLYISIYWWGS--MIPMRKSNPIMKTINHSLIDLPTPPNLSMWWNFGSLLTACLILQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWITRYLHANGASALFICLFLHMGRGLYYGSYLLQKTWNIGIMLFLMTMTTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNIVQWIWGGYAIGNPTLTRFFTLHFILPFIIVALTTVHLLFLHETGSNNPCGISSDSDKITFHPYYTIKDILGLILLLFALAMLTLFLPNFLNDPDNYIPADPLNTPPHIKPEWYFLFAYTILRSVPNKLGGVLALFLSISILAAIPMLHKSKQQSMMFRPLSQFLFWLLITILLTLTWVGSEPMTQPFITIGQMASMMYFTTILILMPLASLIENNLL---KWT-------MT--------AVNLLLLIMPTLAAMAFLTLVERKLLGYMQLRKGPNVVGPYGLLQPFADAVKLFTKEPLKPSTSTTTLYIIAPALAFFITLLLWTPLPMPNALINFNLGLLFTLAMLSMIAHSILWSGWASNSSYALIGALRAVAQTISYEVTLTIILLSILLSSGSFNLNTLITTQEHLWLLLPSWPLAMMWFTSTLAETNRTPFDLLEGESELVSGFNIEYAAGPFALFFMAEYTNIIMMNALTATIFLGTFYPTHSPELFTTCFTIKTLLLTSLFLWIRATHPRFRYDQLMHLLWKSFLPLTLALLMWYTSTPIAISSI-P-PQT--MNP-LAQLIIYTTMITGTLITMLSSHWFLAWTGLEMNMLAFIPILMKKTNLR-STEAAIKYFLTQTTASMILMMATISNNLLSGCW--ATTSHINQTPSLMMTTALAMKLGMAPFHFWVPEVTQGTSLTSGLFLLTWQKLAPISIMYQIHPSINTHILLIL-STLSITVGSWGGLNQTQLRKILGYSSITHMGWMMMTLVYNPTTTILYLTTYIILTTTMFLTLNLNTSTTTLML---SRTWNKSTHLTPLTALILMSLGGLPPLTGFLPKWIIIQELTMNNNFLIPSIMTTMTMLNLYFYMRLIYTTSLTLLPTSNNTKMTW-QLENTKPMPLI-------PSLTIISTLLLPISPLVLTTH---MN-LVLALTVNTLLTSLLMIIMFWLPQLNSYAEKTSPYECGFDPLNPARTPFSMKFFLIAITFLLFDMEIALLLSLPWAVQTTNLPMMIKSTITFIIILILSLTYEWTQKG--LDWVE-MTPTYMNIMLAFTISLLGMLTYRSHLMASLLCLEGMMMSLFIMTTLIALNTHSPLINIMPIILLVFAACEAAVGLALLVSISNTYGLDYIHNLSLLQCMLKMIIPTTMLLPMTWLSKNDMIWINLTVHSLTISLIPL-LFFNQTNTNLLNHS-TYLSSDPLTTPLLTLTIWLLPLMIMASQYHLCNKPPSQKKLFLSMMILLQITLILTFMTTELIMFYILFETTLIPTLIIITKWGNQAERLNASTYFLFYTLAGSLPLLIMLSHTYNNTGSLNITLLTLTNQKLT-TTW-----SHGFTWLACTMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTPILNP-LTEYMAYPFLMLSLWGMIMTS--LTCLRQTDLKSLIAYSSVSHMALVIVSSLIQTPWSFSGATILMIAHGLTSSMYFCLANSNYERTHSRIMFLSRGLQILLPLTAFWWLMASLTNLALPPTINLLGELFAITTSFSWSHITIMLTGLNMLITALYSLHMFITMQRGALTHHMINMKPPFTRENTLMLMHLAPIILLSFNPNIILGFTP--------MCASI-MMTTLTSLTLPIFAS---LISPNKK-RSYPNYVKMT-VMYAFITSLIPTTLFIFLNQETTIWTWHWMVTQTLSLTLSFKLDYFSMMFIPIALFITWSIMEFSLWYMNSDPNINQFFKYLLIFLTTMLILVTANNLFQFFIGWEGVGIMSFLLISWWHARTDANTAAIQAILYNRIGDIGLILAMAWFLLHYNSWDFQQMLALNSN-PSSLPLMGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVTGVFLLIRFHPLMETNMLVQNLTLCLGAITTLFMAICALAQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLTIGSLALTGMPFLTGFYSKDLIIEATNTSYTNAWALFITLIATS-LTSAYTTRTILLTLTGQPRFPALTSINENNPALLNPIKRLTMGSMVTGFLITNSIPPTSPLQPTMPLYLKLSALCATALGFLAALDLTLMTNKLK--MKNPSQMFKFSSMLGYFPTTIHRMIPYQNLLMSQNLALLLLDLTWLEKSMPKMISQAHTTASM--AVTPQKGMIKLYSLS---FLIPL--TLALFLMM----------------- +>Ailurus_fulgens_styani_red_panda +----MNENLFASFTTPT-LMGLPIVILIIMFPSILFPSSN-RLTNNRLISIQQWLLKLTSKQMLSTHNYKGQSWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVVTGFRYKTKASLAHFLPQGTPIFLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLMN-ISTVTALITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIMSVM-LTLFIMFQLKILKSSFPN-NPEPK-PTPMLKT-SMS-W-EKKWTKIYLP-LS-LPQH----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQIPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDVWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVMTVELTSTNIEWLHGCPPPYHTFEEPTYVIS-K--------MAYPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTQELKPGELRLLEVDNRVVLPMELTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASLL----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLALGLTTNTLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALLITILLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKVINNSFIDLPTPSNISTWWNFGSLLGICLILQILTGLFLAMHYTSDTATAFSSITHICRDVNYGWIIRYMHANGASLFFICLYMHVGRGLYYGSYMFLETWNIGIILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIATLATIHLLFLHETGSNNPSGIPSNSDKIPFHPYYTIKDILGALLLILILMTLVLFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIIPLLHTSKQRGMMFRPLSQCLFWLLVADLLILTWIGGQPVEHPFIIIGQLASITYFTILLILMPITSIIENNLL---KW--------MF--------MINIISLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAMKLFTKEPLRPLTSSMTMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTTLFFGAFHSPYMPELYTVNFTIKTLFLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIITAGI-P-PQS--MKP-PIFIIIMTTVISGTMMVLISSHWLLIWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMILMLGIIINLLYSGQW--TMLHTPNPMASNMMTIALTMKLGLSPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQMAPSINPNLLMSM-AIMSMLVAGWGGLNQTQLRKILAYSSIGHMGWMASITVYNPTLMHLNLVMYIMMTLGTFMLFMYNSSLTTLSL---SFSWNKFPLTTLLILMLMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTFMAITALLSLYFYMRLTYTTALTMFPSMNNMKMKW-QFENTKKITLL-------PPLIIMSTMLLPMTPMMLILH---MN-LIMTLFINITLTSLLVLIAFWLPQLNIYTEKTSPYECGFDPMGSARMPFSMKFFLVAITFLLFDLEIALLLPLPWATQTVNLTTMLTTALLLISLLAVSLAYEWTEKG--LEWTE-MSMVYINIFLAFAISFVGLLMYRSHLMSSLLCLEGMMLSLFVMLTITILSNHFTLASMIPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIFPTIMLIPLTWMSKPNLIWINTTAYSLLISLISL-SYLSQLADNSLNFS-LLFFTDSLSAPLLTLTTWLLPLMLMASQFHLSKETFTRKKLYITMLIMLQAFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQAERLNAGLYFLFYTLMGSLPLLIALLYIQNDMGTLNFLAIQYLYQPLL-NSW-----SNALLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLSP-LTNLMAYPFMMLSLWGMIMTS--SICLRQTDLKALIAYSSVSHMALVIMAILIQTPWSYMGATALMIAHGLTSSMMFCLANSNYERIHSRTMILARGLQTLLPLMAMWWLLASLTNLALPPSINLIGELFVIMASFSWSNFTIILMGINIIITALYSLYMLTTTQRGKYSYHIKNIKPSFTRENALMTLHLLPLLLLSLNPKIILGPIY---MKVINSFAPL-TMMMLFMLTLPIIMT---STPMYKS-KFFPQYVKTT-ISYAFTISMIPAMMFIFLGQEMIISNWHWMTIQTLKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFIMAMAWFLFNLNTWDLQQIFMINHE-NLTLPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMELSKTVQTITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHSLNNEQDIRKMGGLFKLLPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-MTAAYSTRILFFTLLGQPRFNPTTTTNENNPLLINSIKRLLFGSIFAGYLITYNITPTSTPQMTMPCYLKMMALAVTIMGFILTLELNFITQNLK--FKYPSNSFKFSNQLGYFPTVIHRLLPMMSLTMSQKSASTLLDLTWLENVLPKSISHFQMNLST--TISNQKGLIKLYFLS---FMITL--ILAMLML----------NSHE---- +>Canis_lupus_laniger_Tibetan_wolf +----MNENLFASFAAPS-MMGLPIVVLIVMFPSILFPAPN-RLINNRLISIQQWLIQLTSKQMLAIHNQKGRTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALIN-ISATTAFITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFIMILSMF-LTLFILFQLKISNHHYPE-NPMTK-STKITGQ-HNP-W-ENKWTKIYSP-LS-LPPQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAMVELTTTNIEWLHGCPPPYHTFEEPTYVIQ-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLEMVPLSYFETWSALMV----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHYNSMSLLTLGLTTNLLTMYQWWRDVIREGTFQGHHTPIVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLHYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIVNNSFIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYVFMETWNIGIVLLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFSLILPFIIAALAMVHLLFLHETGSNNPSGITSDSDKIPFHPYYTIKDILGALLLLLVLMSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILAFIPFLHTSKQRSMMFRPLSQCLFWLLVTDLLTLTWIGGQPVEHPFIIIGQIASILYFTILLILMPTISVIENNLL---KW--------MF--------FINIISLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSMSMFILAPILALSLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHMWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHNPFMPELYSINFTMKTLLLTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVALPIITASI-P-PQT--MKP-PILIIIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYSPR-AMEASTKYFLTQATASMLLMMGVTINLLYSGQW--VISKISNPIASIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPSINTNLLMLM-ALASVLVGGWGGLNQTQLRKIMAYSSIAHMGWMTAIITYNPTMMILNLTLYILMTLSTFMLFMLNSSTTTLSL---SHMWNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMILIPTLMAITALLNLYFYLRLTYSTALTMFPSTNNMKMKW-QFEYTKKATLL-------APLIITSTMLLPLTPMLSVLD---MN-VMLTLVTNVTLASLLVLIAFWLPQLNIYTDKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLTTMLIMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYINIFLAFILSLMGMLVYRSHLMSSLLCLEGMMLSLFVMMSVTILNNHLTLASMMPIVLLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTIMLIPLTWMSKPNMIWINTTTYGLLISLISL-FYLNQPNDNALNSS-LMFFSDSLSAPLLALTTWLLPLMLMASQHHLSKEPLTRKKLYISMLILLQLFLIMTFTASELIFFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALLYIHNFMGSLNFLMIQYWIQPLP-NSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLNP-LTNFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVVSSFSWSNITIILMGINITITALYSLYMLITTQRGKYSHHIKNIKPSFTRENALMTLHLLPLLLLSLNPKIILGPIY------MNMFTSC-MITALVILTLPIIMT---STKLYKN-KLYPYYVKTA-TSYAFMISMIPTMMFIYSGQETIVSNWHWMTIQTMKLSMSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLLFLITMMVLVTANNMFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAVLYNRIGDVGFIMAMAWFLLNLNTWNLQQIFITTND-SFNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNQTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKVLPFTTTSLIIGSLALTGMPFLTGFYSKDLIIESANTSNTNAWALLITLVATS-LTAAYSTRIMFFALLGQPRFSPMILINENNPLLINSIKRLLIGSVFAGYIISHSITPTTIPQMTMPHYLKMMALAVTILGFILALELNLTVQGLK--FNYPSNYFKFSNLLGYYPTIMHRLTPKTSLTISQKSASMLLDSTWLESILPKSISYFQMKSSA--LISNQKGLIKLYFLS---FMLTM--ILSLLIL----------NYHG---- +>Caenolestes_fuliginosus_silky_shrew_opossum +----MNENLFAPFITPT-ILGITTLPMVMLLPCLILSSPK-RWLPNRIQILQIWLIRLITKQMMIMHNTQGRSWSLMLMSLILFIASTNLLGLLPYSFTPTTQLSMNIGMAIPLWMGTVITGFRNKPKASLAHFLPQGTPTPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALSS-INMAVSMITFIILFLLTILELAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWSMTIILMI-IGLFCIYQLKMLNQPMINLDLQNKQIMI-KKE-NLP-W-EKKWTKIYLP-HS-SPLQS---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYMLNEMWAKIHFLIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSIGSFISMTAVILMIFIIWEAFASKREVATVELTTTNIEWLYGCPPPYHTFEQPVYVKS----------MPYPFQLGFQDATSPIMEELTYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETIWTILPAVILVLIALPSLRILYMMDEIYNPHLTVKAMGHQWYWTYEYTDYEDLTFDSYMIPTQELCPGQFRLLEVDNRIVLPMELPIRMLISSEDVIHAWAIPSLGLKTDAIPGRLNQATLTSTRPGVYYGQCSEICGSNHSFMPIVLEMTTLKYFEKWSSMMQS---------MTHQTHAYHMVNPSPWPLTGALSALLITSGMIMWFHSNSMVLFLIGMTSMLLTMYQWWRDIVREGTFQGHHTPVVQKGLRYGMILFILSEVFFFIGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQMIQALTITILLGVYFTILQAMEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGTTFLIVCLIRQFNFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKTHPLMKIMNDAFIDLPAPSNISAWWNFGSLLGACLMIQILTGLFLAMHYISDTMTAFSSVAHICRDVNYGWLIRNMHANGASMFFMCLYLHIGRGIYYGSYLYKETWNIGVVLLFAVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIVLALVIVHLLFLHETGSNNPSGINPDSDKIPFHPYYTIKDILGLFMMTLTLLMLALFSPDMLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLIIPLLHTSTQRSLMFRPISQSLFWILTANLFILTWIGGQPVEQPYIIIGQTASILYFMIIIILMPMAGLFENHMLK-PKW--------MF--------MVNLLMYILPILLAVAFLTLIERKILGYMQFRKGPNVVGPHGLLQPFADAVKLFTKEPLRPLTSSISMFILAPILALTLALTIWIPLPMPSSLIDLNLGLLFILALSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKTLMITQENTWMILMTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMSMNALTTILFLGTSLF-NSPPMNTLLFMLKTTALTILFLWIRASYPRFRYDQLMYLLWKNFLPLTLALCLWFISIPIALSCI-P-PQL--MSP-YVTLIMSISLLLGTSLTLSSSHWLTAWMGLEINTLAIIPMITYTHHPR-TTESAIKYFLTQATASMIIMFAIIYNAWMTNQW--TLFQISNQWASTLMTIALAMKLGLVPFHFWVPEVTQGIPLTSGMILLTWQKIAPISILYQISPTLNMNILMSL-AMLSTILGGWGGLNQTQLRKILAYSSIAHMGWMTVVIMIYPTLTLLNLILYILTTLTMFLTLNFSSMTTIKTL---SNLWNKSTPMTMITFLMLLSLGGLPPLTGFLPKWLTLQELVTTNNISSATILALSALLNLFFYTRIIYSSSLTMCPSTNNSKMQW-MNSPTKPLSLI-------PTLAILSSMLLPLAPLFITLN--MIN-LIYSLIINSSLSIIIVMIAFWIPQLYLYLDKSSPYECGFDPLGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWAIQLSSPMTMLVLAYSLILLLTGGLAYEWLQKG--LEWTE-MASIYLNLMMAFLLALSGVLIYRSHLMSTLLCLEGMMLSLFIMMTLTISHFQMFSLSMAPLILLVFSACEAGIGLALLVKTSNAHGNDHVQNLNLLQCMLKILMPTFMLIPLTWYSKKPWLWMNLTAHSLMISIFSL-TFIHQYMDLGYNFN-PSFSMDSLSGPLLILSCWLLPLMIIASQNHLNKESLNRKKTYLTMLIILQLSLIMAFTSSELIMFYIMFETTLIPTLVIITRWGNQNERLNAGLYFLFYTLVGSLPLLIALLYLYNNLGTLHIL-----TTTLK-YNVAELTFSSTLLWYACMLAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITIFSEP-LTSYLFYPFIILSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIIAALMQSTLSFMGASILMIAHGITSSMLFCLANTNYERIHSRTMILARGLQTMLPLMCTWWLLASLANLALPPSINLLGELMVIIASFSWSNFSIILLGINTVITAIYSLYMLITSQRGKFTHHMHPIIPSFTREHMLMILHLLPLILLSINPKYILGLTY------MNLLFTSSMILSISMLLFPLVLN---IILPNKT-TQFPKYCKNM-IKMAFFTSLPTTMMFIYSGQETIITNWQWFSVHTFNISMSFKLDYFSITFIPIALFVTWSILEFSMWYMHADPNIHRFFKYLITFLFTMIILVSANNLFQLFIGWEGVGVMSFMLIGWWYGRTDANTAALQAILYNRIGDIGFMLTLAHLMINNNSWDFQHIFSTNMN---TLALMGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMMENNPTILTLALCLGSITTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLNIMPITSSATMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNAWALTITLIATA-LTAMYSMRIIFYALLNQPRFLPISPINENNPNLINPILRLALGSIFAGFLLTMNMPPTSSITMTMPLTIKLSALIITILGLVVATELNSLTTQLT--TTSSLHTHNFSNSLGYFTHIFHRALPMVNLHLGQHIATMLIDLNWYEKLGPKGQTKFHSIMSS-SMSLIHKGMIKLYFMS---FIISI--LIIILVI------------------ +>Trichechus_manatus_West_Indian_manatee +----MNENLFASFITPT-MMGLPIVILIIALPAMLYPSPN-RLVDNRLISIQQWLVQLILKQMLLIHNVKGRTWSLMLISLILFIGSTNLLGLIPYSFTPTTQLSMNLGMAIPLWAGTVITGFRYKTKSSLAHFLPQGTPTLLIPMLVVIETISLFIQPMALAVRLTANITAGHLLMRLIGGATLALTA-ISPATASITFIVLLLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTTTWFVTIVSMY-VTLFILFQIKLSNFTYPL-NMTPI-SPSTSNF-TTP-W-ETKWTKTYLP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALLWALGFIFLFTVGGLTGIVLANSSLDVILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFLIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVILMVFMVWEAFASKREVSTVELTTTNLEWLNGCPPSYHTFEEPAYVKV----------MPYPLQLGLQDATSPIMEELTHFHDHTLMIVFLISSLVLYIISSMLTTKLTHTSTMDAQEVETIWTILPAMILILIALPSLRILYMMDEINDPLLTVKTMGHQWYWSYEYTDYEDLAFDSYMIPTNDLEPGQLRLLEVDNRVVLPMEMPIRMLISSEDVLHSWAIPSMGLKTDAIPGRLNQATLMSSRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEDWSASLL----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLVMWFHYHSTILVSLGLLTNVLTMYQWWRDVIREGTFQGHHTPIVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPMEVPLLNTSVLLASGVTITWAHHSLMEGNRKQMLQALFITISLGAYFTLLQASEYYEASFSISDGIYGSTFFVATGFHGLHVIIGSTFLAVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKILNDSFIDLPTPTNISSWWNFGSLLGACLIIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWIIRYLHANGASMFFLCLYAHIGRGIYYGSYLYSETWNIGIILLLTIMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWVWGGFSVDKATLTRFFALHFTLPFVVTALVTVHLLFLHETGSNNPTGLISDSDKIPFHPYYSIKDLLGLFLLILILLLPTLFSPDMLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALLPLLHTSKQRSLLFRPLSQCLFWILVTDLITLTWIGGQPVEHPYIVIGQLASILYFSIILIFMPIAGLIENHLL---KW--------MF--------MINLFSLIIPILVAMAFLTLIERKILGYMQLRKGPNVVGPYGLLQPFADAIKLFIKEPIRPSTSSKLMFTIAPVLALTLALTMWIPLPTPYPLINMNLSMLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVSLVIILLPAMLMNGSFTLFSLTTTQEHLWLIFPLWPLAMMWFVSTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFMAEYTNIMMMNTLTAILFLGALHNPFLPETYTISLALKTSLLTICFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSIPIMLACI-P-PQT--MNP-LIFSMILMTLMLGTMATMLSSNWLLAWMGLEMNMLAMIPILTMNSNPR-STEAATKYFLAQSTASMLLMMAILINFMLSGQW--TITKLPNVVTSSMALAALMMKLGLAPFHFWVPEVTQGTSLISGAILLTWQKLAPLSILYQIIPSIDINLLIIS-GLLSILVGGWGGLNQTQLRKILAYSSIAHMGWMLIIMPYNPSLTILNLVIYILMTLSIFMILMNNYSTSTSTL---SLLWNNTPMMMIMLMITLLSLGGLPPLSGFMPKWLIIYELTKNDNIILPASMAMFALLNLYFYMRLIYSSSLTMFPSTNNMKMKW-QFTNPKYLTLL-------SPLIILSTLILPLTPTLSILE---MN-LMITMFTNTALASLLILIAFWLPQLYTYAEKVSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTTNLNLMLFMALTLISLLALSLAYEWTQKG--LEWAE-MPFIYINLLLAFSISFIGLLMYRSHLMSSLLCLEGMMLSLFILGSLLCLNMHSTLSMMAPMILLVFAACEAAVGLALLVMVSNTYGRDHVQNLNLLQCMLKIIMPTAMLIPLTWLSNSSTMWINITMHGFIISLISL-PLLNQPLDTGLNFS-LLFFSDQLSTPLLILTTWLFPLMLMASQHHLSQESVTRKKSYVTMLILLQLFLIMTFTATELILLYIMFEATLIPTMIIITRWGNQSERLNAGLYFLFYTLLGSIPLLVTLVYIQNVLGTLNLMITSYWIQHLP-HSW-----STSILWLACMMAFMVKMPLYGIHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITTLLDP-LTKSMAYPFLMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLACLTNMALPPSINLIGELFIILTSLSWSNFTIMFTGLNMLLTASYTLYMLITTQRGKASHHAKIIKPSFTRENALMALHVIPLLLLSINPQLILGPTF------MNLFSSF-TLITLTILILPITLT---PSQIYNS-TNFPHYVKTT-VSYAFMTSMVPAMMFMHLGHEAVISNWHWMTIHTLKLSLSFKLDYFSLVFMPVALFVTWSIMEFSLWYMHSDPYINRFFKYLLLFLITMMILVTANNLFQLFIGWEGVGMMSFLLIGWWYGRADANTAALQAMIYNRIGDVGFVAAMAWFLLHSNSWELQQIFLASPK-NDTLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMETNPLTLTLTLCIGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLGDEQDIRKMGGLYKTLPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAMSTSYTNAWALLITLAATS-MTAVYSTRIVFFVLLGQPRYPMLIQINENNPFLINAIKRLILGSIFAGFMISSNLTPTTVPHMTMPHHLKFAALAITLLGFALAMELSLFTYHLK--FDFPLYTHKFSNMLGYYPTIIHRSPPFHVLNTSQNLASTIMDLAWLEKAIPKGLASMQKFAST--SISNQKGMIKLYSLS---FLISL--TLGLLLTI----------------- +>Cervus_elaphus_red_deer +----MNENLFASFITPM-IMGLPLATLIVMFPSLLFPTSN-RLVNNRLISLQQWMLQLVSKQMMGIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGAALALMS-ISTTMALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LALFIIFQLKISKHNFHF-NPELM-LTKTQKQ-NTP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKAMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMVLLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGVCLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVVLLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGILLLVLFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILVLILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIIIGQLASVLYFFIILVLMPITSTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFTKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPVLPELYTINFIMKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFMSSI-P-PQT--MNP-IIFILILSTMMMGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEAATKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMFMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTILVLITLLSMGGLPPLSGFMPKWMIIQELTKNDSLILPTLMAIMALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPMLSILE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVALAGLLMYRSHLMSSLLCLEGMMLSLFVMASLTILNSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFNDNSLNFS-LVFFSDSLSAPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNITGSLNFLVLQYWVQPLP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNITPSFTRENTLMSLHMLPLLLLSLNPKIILGSLY------MNLFSSF-TLVTLLLLTIPIIIT---SSDNYKT-SNYPLYVKTT-ISYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLVTMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLNPN-DSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITVNENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTIPQLTMPYYLKMMALMVTILGFILALEISNMTQNLK--FNYSTNVFKFSNMLGYFPTIMHRLTPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQTKMSI--MVTNQKGLIKLYFLS---FLVTI--TVSMILF----------NFHE---- +>Trachypithecus_germaini_Indochinese_lutung +----MNENLFTPFTTPT-LLSLPAVVPIILFPTLLFPTSK-HLVNNRLVTIQQNLTQLILKQMMMIHNTKGRAWSLMLMSLIIFIATTNLLGLLPHSFTPTAQLSMNLAMAIPLWAGTVITGLRFKTKSSLAHFLPQGTPTLLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGSAVLALLT-INFFATSLTFMLLLLLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTSSWFITIMTML-PALYLIMQLKLLNMNYYL-SPPQK-IPNMQMF-NNP-W-QLKWTKIYLP-HL-QPQHS---MLINRWLFSTNHKDIGTLYLLFGAWAGTVGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNLSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSAAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQACAKAHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSTGSFMSLVAMLLMIYMIWEAFASKRKVLSIEQPAYNLEWLHGSPPPYHTFDEPTFIKV-K--------MAHPVQLGLQDATSPIMEELIAFHDHAFMIVSLISFLVLYILLSVLTTKLTSTNITDAQEMETIWTILPAIILVLIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAIPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGAFSALLMTSGLIMWFHFYSMTLLMLGLLTNMLTMYQWWRDIVRESTYQGHHTMPVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPHLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKQMIQALLITILLGIYFTLLQMSEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTVCLIRQLLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MAPLRKSNPIMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLTETWNIGIALLLMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGANLVQWVWGGYSIDNPTLTRFFTLHFTLPFIIATLTALHLLFLHETGSNNPCGIPSNSDKIPFHPYYTIKDILGLIFLLLILMTLVLFSPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPTLHKSKQQSMAFRPLSQFLLWLLITTLLTLTWIGGQPVNQPFIMIGQMASMMYFTTILILMPLASLIENNLL---K---------MF--------TTNILLVTLPAIVAMAFLTLTERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTTLYVIAPALAFTIALLLWVPLPMPNSLINLNLGLLFILATSSLAVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSILLMSGSFNLHSLIMTQEHLWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNTEYAAGPFALFFMAEYMNIIMMNALTATIFLGTLYPVHSPELFTTCFITKTLLLTSLFLWIRATYPRFRYDQLMYLLWKNFLPLTLAFLMWYISVSIMTSGI-P-PQI--MNP-LAQLIIYFTMFMGTIITLLSSHWFLAWAGLEMNMLAFTSILIKKTSSR-STEAATKYFLVQSTASMILMMAIMYNNLFPEQW--TMLNNINQPSSLAMTMALAMKLGMAPFHFWVPEVTQGTPLISGLLLLTWQKLAPISIMYQICSSINTSALLIL-SILSIMVGSWGGLNQTQLRKILAYSSITHMGWMMTTLTYNPNITIFYLLTYIILTTTAFLALNLNSNTTTLML---SHTWNKLTWLLPLMSSTLLSMGGLPPLTGFLPKWVTIQELTKNNNFIMPTIMIIMTLLNLYFYLRLIYITSMTLLPVSNNTKMKW-QFENTKTTLLI-------PPLIILTTFLLPMSPTILTIP---MN-LVLALTINIFLTLLLMIIMFWLPLLNTYAEKADPYECGFDPLNSARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPVMIKSSMMLIIILTLGLAYEWTQKG--LDWTE-MPVIYMNIMLAFLISLLGMLIYRSHLMSSLLCLEGMMLSLFIMSTLMALNMHFPLANIVPIALLVFAACEAAVGLALLVSISNMYGLDYIHNLSLLQCMLKMILPTIMLLPTTWFSKNSMLWINLTMHSLVISLIPL-MFFNQASNNLTSYS-TYLSSDPLSTPLLTLTAWLLPLMIMASQYHLHNESPLWKKLYLSMMIFLQISLIMTFMSTELILFYISFETTLVPTLIIITRWGNQAERLNASTYFLFYTLAGSLPLLIMLVFMYNNTGSLNIVLLTLTAQELT-NTW-----SHNLIWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIMASLIQTPWSFTGAIILMIAHGLTSSMLFCLANSNYERTHSRIMLLSRGLQILLPLMAFWWFAANLTNLALPPTINLIGELLVVTVSFSWSHVTIMLTGLNMLITALYSLHMFITTQRGMLTPHIMNMKPSFTRENMLMFMHISPIILLSLNPNIIMGFTS--------MHASI-VMLTLTYLMLPIITT---LIKPNKN-HLYPNYVKTT-MMFAFIFSLFPMTLYILLDQDMIISNWHWTTIQSLELTLSFKLDYFSVLFTPIALFITWCIMEFSLWYMSSDPNINQFFKYLLIFLITMLILITANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAATQAILYNRIGDIGFILTMAWFLLHYNSWDLQQMFILDSN-PNLLPLMGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNMLIQSLTLCLGAITTLFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKMMPLTSTSLTIGNLALTGMPFLTGFYSKDLIIETANTSYTNAWALSTTLIATS-LTSAYSTRTIILALTGQPRFSTSVHINENNPALLNPIKRLTLGSLLAGFLITNNIFPTTPPQLTMPHYLKLLALCVTILGFLMALDLTLMTNNLK--MSTPSHMFKFSNMLGYFPITIHRMIPYQNLIMSQNLAFILLDSIWLEKLMPKTISHVHTTTSI--TITTQKGMIKLYFLS---FLIPL--ILVTLLTM----------------- +>Uropsilus_soricipes_ +----MNENLFASFITPT-MMGLPIVVLIIMFPSIMFPSPN-RLINNRMISLQQWLIQLTSKQMMGIHNIKGQTWSLMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISPITAAITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSITILATI-ITLFILFQLKISKHIYYS-SPETK-SMKSLKY-NTP-W-ETKWTKIYSP-LS-LPLQ----MFINRWLFSTNHKDIGTLYMLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFIMIFFMVMPILLGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLPSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIGGFVHWFPLFTGYTISSTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFASKREVSTVELTTTNIEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQFGFQDATSPIMEELLHFHDHALMIAFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTIMPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKYFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSMVLLSLGLLTNTLTMYQWWRDVVREGTFQGHHTPIVQKGMRYGMILFIISEVFFFAGFFWAFYHSSLAPTHELGGFWPPAGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMNQALFITIALGVYFTVLQAAEYYEAPFTISDGVYGSTFFMATGFHGLHVIIGTTFLTVCLFRQLKYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MANLRKTHPLMKIINNSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHIGRGLYYGSYMFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAGVHLIFLHETGSNNPSGLVSDADKIPFHPYYTIKDILGVLILLLVLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIIPMLHTSKQRSMMFRPVSQCLFWILVADLFTLTWIGGQPVEHPFIIIGQLASILYFLLILVLMPLASIMENNFL---KW--------MF--------MINLLTLIVPILLAVAFLTLIERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSISMFIIAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFSLSNLIITQQYTWLIFSSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNVLTTILFLGAFHSPYFPELYSINFMLKTLVLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSFPIFLSGV-P-PQS--MNP-MVMWMICFTMITGTMIVMTSSHWLMVWIGFEMNMLAVIPILMKNFNPR-SMEAATKYFLTQATASMLLMLAIIVNLMYSGQW--SVIKMSNSITSMMMTSAMIMKLGMAPFHFWVPEVTQGISLTSGMILLTWQKLAPLSILMQMAHTLNTNMMLTT-AILSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMAAVLTYNPSMTMLNLLLYIMMTLTTFLLLQYNSTTTTLSL---SMLWNKMPLMSILILVTMLSLGGLPPLSGFMPKWMIINELTKNYSIMLPTLMAIMALLNLYFYMRLTYSTSLTLFPTANNMKMKW-QFENPKKTPFL-------PTLTVLSTMLLPMTPMLTIMLD--MN-MLISMITNISLSSILVLIAFWLPQLNSYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDNVKIVLVMALTLISMLALSLAYEWTQKG--LEWNE-MTLVHVNIMIAFLVSLLGLLLYRSHLMSTLLCLEGMMLSLFILSTILILNLHFTLASMAPIILLVFAACEAAVGLSLLVMVSNTYGVDYVQNLNLLQCMLKIIIPTMMLIPLTWLSNNNMIWINTTMYSLLISLLSL-SLLNYSDNNV--FS-ILLFSDSLSTPLLILTAWLLPLMLMASQNHLANEFITRKKLYISMLILLQIFLLMTFTATEMILFYILFEATLVPTLILITRWGNQTERLNAGYYFLFYTLIGSLPLLVALTYLQNTTGSLNIMIMQLMASHLQ-DAW-----SSTLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTVLSP-QTNFMAYPFMALSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVIVAIMIQTPWSYMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMAAWWLMASLTNLALPPTINLIGELIIMLTSFSWSNFTMILMGLNMVITALYSLYMLIQTQRGKHTHHVNNIYPSFTREHALMALHIFPLLLLSLNPKIILGMTW------MNLFSSS-LLLLLLILTLPVMAS---MTDTYKK-TTFPSYVKDT-IACAFMISMIPYIMFSYSGQEAVISNWHWMTINTMKLSISLKFDYFSLIFMPVALFVTWSIMEFSTWYMHSDPNINRFFKYLLMFLITMLILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLSMAWFMYNSNSWELQQIFLIPTE-QTNIPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLLENNKTAQTLILCLGAITTLFTALCALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKTMPFTTTALITGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-LTAVYSTRIMFFALLEQPRFPPVVLINENNPSLINPIKRLLMGSIFAGFIISNNLTPMNIPTMTMPAYLKLTALFVTFVGFMLAIELNNMTRNLK--FSSSNNMYKFSNQLGFFPIIMHRLMPKMNLIMSQKMASMLLDLTWLENALPKTLAQIQMNYST--LVTNQKGLVKLYFLS---FLISM--LLGLMIF----------SFHE---- +>Capra_nubiana_Nubian_ibex +----MNENLFTSFITPM-ALGLPLVTLIILFPSLLFPSSN-RLINNRLISLQQWALQLMSKQMMSIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKTSLAHFLPQGTPTPLIPVLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTS-ISPATALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTTILSMF-LALFIIFQLKISKYNFYH-NPELT--AKALKQ-NTP-W-ETKWTKIYLP-LL-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNMAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVSL-K--------MAYPVQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSTALLALGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITITLGXYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPTPPNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGIMLLILVLMLLVLFTPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLVPFLHTSKQRSMMFRPISQCMFWILAADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVMMPAASTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEQMWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINFIIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILMTVMLGTTIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVTKLFHPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILPYNPTMTLLNLIIYITMTSTMFLLFMANSTTTTLSL---SHTWNKMPIMTILVLITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLAYSTTLTMFPSTNNMKMKW-QFSITKRMTLL-------PTLTVLSTMLLPLTPILSILE---MN-LMITLLTNFTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNSMIWINSTLHSLLISFTSL-LLMNQFGDSSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESPTRKKTFISTLVLLQLFLIMTFTATELIFFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIHIQNTVGSLNFLILQYWAQPVP-NSW-----SNVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITLLLNP-ITDYMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKHTHHINNILPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSL-ALTTLALLTTPIMMT---NLNIYKS-TNYPLYVKTV-VSCAFITSMVPTMMFIHTGQEMIISNWHWLSIQTLKLSLSFKMDYFSVMFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLINLNTWDFQQIFMLKPE-DSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGVPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAVYSTRIIFFALLGQPRFPALININENNPFLINPIKRLLIGSLFAGFIISNNISPMTIPQITMPHYLKMTALTVTTLGFILALETTNMTHHLK--FNYPSNTFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLEAILPKTISQAQMKMAT--TTTNQKGLIKLYFLS---FLITI--LVSTILF----------NFHE---- +>Capra_ibex_Alpine_ibex +----MNENLFTSFITPM-VLGLPLITLIILFPSLLFPSSN-RLINNRLISLQQWALQLVSKQMMSIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKTSFAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTS-ISPTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTTILSMF-LALFIIFQLKISKHNFYH-NPELT--TKVLKQ-NTP-W-ETKWTKIYLP-LL-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTATNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMVPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSTALLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPPVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRSHMLQALFITITLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPTPPNISSWWNFGSLLGTCLILQILTGLFLAMHYTSDTMTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGAMLLILVLMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILVLVPFLHTSKQRSMMFRPISQCMFWVLVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLTILVMMPAASTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINFIIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-TIFIIILMTVMLGTAIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVTKLFHPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYQILPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILPYNPTMMLLNLIIYITMTSTMFLLFMANSTTTTLSL---SHTWNKMPIMTTLALVTLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFSTTKRMTLL-------PTLTVLSTMLLPLTPILSILE---MN-LMIALLTNFTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTANLNTMLTMALLLISLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMTAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNSMIWINSTLHSLLISFTSL-LLMNQFGDSSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENPTRKKLFISMLVLLQLFLIMTFTATELIFFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIHIQNTVGSLNFLILQYWAQPVP-NSW-----SNVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITLLLNP-ITDYMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSAFSWSNITIILMGLNMVITALYSLYMLITTQRGKHTHHINNILPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSL-ALTTLTLLTAPIMMT---NLNIYKS-TNYPLYVKTV-VSCAFITSMVPTTMFIYTGQEMVISNWHWLSIQTLKLSLSFKMDYFSVMFIPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILTMAWFLINLNTWDLQQIFMLKPE-NSNLPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKLAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAVYSTRIIFFALLGQPRFPALININENNPFLINSIKRLLIGSLFAGFIISNNIPPMTIPQITMPHYLKMTALAVTTLGFILALETANMTHHLK--FNYSSNTFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLETILPKTISQAQMKMAT--TTTNQKGLIKLYFLS---FLITI--LVSTILF----------NFHE---- +>Balaenoptera_musculus_Blue_whale +----MNENLFAPFMIPV-MLGIPITTLIIILPSILFPAPN-RLINNRTISIQQWLTKLTSKQLMSVHSPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNVGMAIPLWAGTVATGFRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGETTLVLMS-TSLFTAIITFTILALLTILEFRVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLLTILSML-LTLFVLFQLKISKHSYSP-NPKLV-PTKTQKQ-QTP-W-NITWTKIYLP-LL---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMIWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFLIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFTSKREVLAVDLTYTNLEWLNGCPPPYHTFEEPAFVNP-KWS------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEVNNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLEFFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLSTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIALGLYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSNHHFGFERAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINDAFIDLPTPSNISSWWNFGSLLGLCLIVQILTGLFLAMHYTPDTMTAFSSVTHICRDVNYGWVIRYLHANGASMFFICLYAHMGRGLYYGSHAFRETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAIVHLIFLHETGSNNPTGIPSDMDKIPFHPYYTIKDILGALLLILTLLMLTLFAPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLALIPMLHTSKQRSMMFRPFSQFLFWVLVADLLTLTWIGGQPVEHPYVIVGQLASILYFLLILVLMPVTSLIENKLM---KW--------MF--------MINILTLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPVLALALALTMWSPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLATTQEQLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTAILFLGTFHNPCNPELYTTNLIIKTLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI-P-PQT--MNP-SIFIILLTTLILGTMMVITSSHWLLAWIGFEMNMMAFIPIMMKNPSPR-ATEASTKYLLTQATASALLMMAVIINLMYSGQW--TITKLFNPTASTLMTVALAIKLGLAPFHFWVPEVTQGIPLTTGLILLTWQKLAPLSILYQISPSINLYLMLTM-SLLSILVGGWGGLNQTQLRKIMAYSSIAHMGWMTTILPYNPTLTLLNLLIYITMTFTMFMLFIQNSTTTTLSL---SQTWNKTPIITTLTMLTLLSMGGLPPLSGFMPKWMIIQELTKNDILIMPTFMAITALLNLYFYMRLTYSTALTLFPSTNNMKMKW-QFSPTKRAPLL-------PTAIVISTMLLPLTPMLSILL---MN-LLLTLLTNTTLALLLVFIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQSNNLNTMLTMALFLISLLAASLAYEWTQEG--LEWAE-MTLIHMNVLMAFSMSLVGLLMYRSHLMSALLCLEGMMLSLFVLAALTILNSHFTLANMMPIILLVFAAYVAAIGLALLVMVSNTYGTDYVQSLNLLQCMLKFIIPTIMLMPLTWLSKNNLIWINSTAHSLLISFSSL-LLLNQLNDNSLNYS-LIFFSDPLSTPLLMLTMWLLPLMLMASQSHLIKEPPVRKKLYITMLIMLQALLIMTFTATELILFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALVYLQNTTGSLNFLLLQHWAKPLS-ASW-----SNIFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSMLNP-LTEHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQVLLPLMATWWLLASLTNLALPPTINLVGELLVVMSVFSWSNPTILLMGANIVITALYTLYMLIMTQRGKHTHHINNIIPSFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSF-VLLTLLILFTPIMVS---NTDPHKN-NKYQSYVKNI-VFCAFITSLIPAMMYLHTNQETLISNWHWITIQTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLLASMAWFLSNMNTWDLQQIFMLNQN-PLNFPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLMENNKLIQTVTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPFTTTALIIGCLALTGMPFLTGFYSKDPIIEAATSSYTNAWALLLTLTATS-LTAVYSTRIIFFALLGQPRFPPSTTINENNPLLINPIKRLLIGSIFAGFILSNSIPPVITPLMTMPLHLKLTALTMTTLGFIIAFEINLDTQNLK--YTHPSNPFKFSTLLGYFPTIMHRLPPHLDLSMSQKLATSLLDLTWLETTLPKTTALIQLKAST--LTSNQQGLIKLYFLS---FLITI--TLSMILF----------NCPE---- +>Capra_sibirica_Siberian_ibex +----MNENLFTSFITPM-ILGLPLVTLIILFPSLLFPTXS-RLINNRLISLQQWALQLVSKQMMSIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPXLLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALTS-ISATTALMTFIILILLTILEFAVAMIQAYVFTLLVSLYLHDXTMPQLDTSAWLTTILSMF-LALFIIFQLKISKHDFHH-NPELT--TKMLNQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLTMWFHFNSIILLTLGLTTNMLTMYQWWRDVIRESTFQGHHTLAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAATWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHXGRGLYYGSYTFLETWNIGVLLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAMVHLLFLHETGSNNPTGIPSNTDKIPFHPYYTIKDILGATLLILALMLLVLFMPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALALSILILVLVPFLHTSKQRSMMFRPISQCMFWVLVADLLTLTWIGGQPVEHPYVIIGQLASIMYFLIILVIMPTASIIENNLL---KWK-------MF--------MINILMLIVPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLAEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINFIIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILMTVVLGTVIVMISSHWLFVWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVTKLFHPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILLYNPTMMLLNLIIYIIMTSTMFSLFMANSTTTTLSL---SHTWNKMPIMTTLVLITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAIAALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKRMNLL-------PTMTVLSTMLLPLTPILSILE---MN-LMITLLTNFTLATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTANLSTMLTMALLLISLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMTAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIVPTMMLMPLTWLSKNSMIWINSTLHSLLISFTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESPARKKLFISMLVLLQLFLIMTFTATELIFFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALTHIQNTVGSLNFLILQYWAQPMS-NSW-----SNAFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITLLLNP-ITDYMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLIMTQRGKHTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSS-ALTTLTLLTAPIMMT---NLNIHKS-TNYPLYVKTV-VSCAFITSMIPTTMFIYTGQEMIISNWHWLSIQTLKLSLSFKMDYFSVMFIPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILTMAWFLINLNTWDLQQIFMLKPE-NSNLPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNEFAQSIMLCLGAITTLFTALCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAXYSTRIIFFALLGQPRFPTLININENNPFLINSIKRLL-GSLFAGFIISNNIPPMXIPQMTMPHYLKMTALTITALGFILALETTNMTHHLK--FXYSSNTFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLEAILPKTISLAQMKMAI--TMTNQKGLIKLYFLS---FLVTI--LVSTILX----------NFHE---- +>Megaptera_novaeangliae_humpback_whale +----MNENLFAPFMIPI-MLGIPITTLIIILPSILFPAPN-RLINNRTISIQQWLTKLTSKQLMNVHSPKGQTWALMLISLFLFIASTNLLGMLPHSFTPTTQLSMNVGMAIPLWAGTVATGFRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGETTLTLMN-TSLFTALITFTILALLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLLTILSML-LTLFVLFQLKISKHSYSP-SPKLT-PTKTQKQ-QAP-W-NTTWTKIYLP-LL---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWTKIHFMIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFTSKREVLAVDLTSTNLEWLNGCPPPYHTFEEPAFVNP-KWS------MAYPFQLGFQDAASPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEVNNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTPDLKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLETFEKWSVSML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMVLLTLGLSTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMVLFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIALGLYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINDTFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYAHMGRGLYYGSYAFRETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAIVHLIFLHETGSNNPTGIPSNMDKIPFHPYYTIKDTLGALLLILTLLMLTLFAPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAFIPMLHTSKQRSMMFRPFSQFLFWMLVADLLTLTWIGGQPVEHPYMIVGQLASILYFLLILVLMPMTSLIENKLM---KW--------MF--------MINILMLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPVLALTLALTMWSPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLATTQEQLWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMLTAILFLGTFYNPHNPELYTTNLIIKTLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI-P-PQT--MNP-SIFIILLTTLILSTVMVATSSHWLLAWIGFEMNMMAFIPIMMKTPSPR-ATEASTKYLLTQATASALLMMAVIINLMYSGQW--TITKLFNPTASTLMTVALAIKLGLAPFHFWVPEVTQGIPLTTGLILLTWQKLAPLSILYQISPSINLHLMLTM-SLLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILLYNPTLTLLNLLIYITMTFTMFMLFIQNSTTTTLSL---SQTWNKMPIITTLTMLTLLSMGGLPPLSGFMPKWMIIQELTKNDMLIMPTFMAITALLNLYFYMRLTYSTALTLFPSVNNMKMKW-QFYSTKRTTLL-------PTAIVISTMLLPLTPMLSILL---MN-LLLTLLTNTTLALLLVFIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSLKFFLVAITFLLFDLEIALLLPLPWAIQSNNLNTMLTMALFLMSLLAASLAYEWTQEG--LEWAE-MTLIHMNILMAFSMSLVGLLMYRSHLMSALLCLEGMMLSLFVLATLTILSSHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIIPTMMLVPLTWLSKNNLIWINSTAHSLLISFSSL-LLLNQLNDNSLNYS-LIFFSDPLSTPLLMLTMWLLPLMLMASQSHLIKEPPIRKKLYITMLITLQALLIMTFTATELILFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALLYLQNTTGSLNFLLLQHWAQPLS-TSW-----SNIFLWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSMLNP-LTEHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQVFLPLMATWWLLASLTNLALPPTINLIGELLVVMSVFSWSNPTIILMGTNIVITALYTLYMLIMTQRGKHTHHINNITPSFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSF-TLLTLLILTTPIMTS---YTNSHMN-NKYQSYVKNI-VLCAFVTSLIPAMMYLHTNQETLISNWHWVTIQTLKLTLSFKMDYFSLMFMPVALFVTWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLLASMAWFLSNMNTWDLQQIFMLNQN-PLNFPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLMENNKLIQTVTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFLCSGCIIHNLNNEQDIRKMGGLFKALPFTTTALIIGCLALTGMPFLTGFYSKDPIIEAATSSYTNAWALLLTLTATS-LTAVYSTRIIFFALLGQPRFPPSTTINENNPLLINPIKRLLIGSIFTGFILFNSIPPMTTPLMTMPLHLKMTALAMTTLGFIIAFEINLNTQNLM--YTHPSNSYKFSTLLGYFPTIMHRLPPHLDLSMSQKLATSLLDLTWLETILPKTTALIQLKAST--LISKQQGLIKLYFLS---FLITI--TLSMILF----------NYPE---- +>Varecia_variegata_variegata_ +----MNENLFASFTTPT-IVEIPIVIIIMMIPSILFPSPA-RLINNRLTSLQQWLIQLVLKQLMTIHNAKGRTWSLMLVSLILFIASTNLLGLLPYSFTPTTQLSMNLGMAIPLWAAAVIKGLRHKTKASLAHFLPQGTPIPLIPVMVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLELIS-IFPSTAPVTLIILILLMILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLITILSMI-LTLLIVFQLKILKFNYPL-SPMLN-LINKHLY-THP-W-ETKWTKIYLP-HS-LPQQS---MFTNRWFYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAMSQYQTPLFVWSVMITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSIGSFISLMAVMLMIFMIWEAFASKREVLMVELTSTNLEWLHGCPPPYHTFEEPTYVKA----------MAHPVQLGFQDAASPIMEELLYFHDHTLMIMFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAAILILIALPSLRILYMMDEITSPSLTLKTMGHQWYWSYEYTDYENLCFDSYMTPCSDLKPGELRLLEVDNRVVLPTELSIRTLISSEDVLHSWAVPSLGMKTDAIPGRLNQATLMASRPGVYYGQCSEICGANHSFMPIVLELIPLKHFEEWLLSML----------MTHQTHTYHMVNPSPWPLTGALSALLMTSGLTVWFHFNSNLLLSLGMMTNLLTMFQWWRDIVREGTFQGHHTLTVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPELGGYWPPMGINPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGDRMHMIQALFITIALGIYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTICFLRQLKYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNTRKNHPLMKIMNNSLIDLPAPSNISSWWNFGSLLGACLTLQIITGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFLCLFIHIGRGLYYGSFTLLETWNVGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGINLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALVMVHLLFLHETGSNNPLGIPSNSDKIPFHPYYTIKDFLGLLLLILLTLALVLFSPDLLTDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALFFSILILAIIPLLHTAKQQSMIFRPLSQYLFWILIANLFTLTWIGGQPVEHPYIVIGQTASILYFSLILIIMPLVNLIENKML---KW--------MF--------LINLLLLIIPILLAMAFLTLIERKILGYMQFRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPMLALTIALTMWIPLPLPYPLINMNMGLLFVLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLITTQEYLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNSYSPETYTMNFIIKTLLLIILFLWVRASYPRFRYDQLMHLLWKNFLPLTLAMCMWYISLPILTSCI-P-PQV--MKP-IILMLIMFTIFMGTMLTMISSHWLLMWIGLEINMLAIIPVLMKKASPR-STEAATKYFLTQATASMLLMFTIIINMLYSGQW--GIINMHNQLISFMIIMALTMKLGMTPFHLWVPEVTQGVPLTSGMLLLTWQKLAPISIMLQTHPSMNLNTLLLI-ALLSILAGGWGGLNQTQLRKILAYSSIAHMGWMVAILMYCPSMTILNLMIYLMLTIIMFTMLNMYTNTTTLTL---SNLWNKTPITTLMILISLLSLGGLPPLTGFLPKWAIIQELTKNNDITLAVTMAILALLNLYFYMRLMYSTSLTLFPTLNNTKMKW-QFQQMKHMPLL-------SPLIILSTLTLPLSPTLLILN---MN-LPLTLTINITLTLILVTIAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLKLTLTMALILIFILAAGLAYEWLQKG--LEWTE-MPSIFINIILAFIIALLGMLIFRSHLMSSLLCLESMMLSMFILSTLTILSLHLTMSFMMPILLLVFAACEAAVGLALLVTVSNTYGLDYIQNLNLLQCMLKIIMPMIMMLPMTWYSNKPMIWINTTLHSLTISLVGL-SFLNQLNDNSNNFS-STFFSDPLSSPLMMLTMWLLPLMILASQHHLAKESWTLKKSYLSMLIFLQMLLVMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLTGSMPLLVALIYVQNYSGSLNLLMMNLCFQELP-NSW-----SNNLLWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITVILDS-LTKFMAYPFFMLCLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATILMIAHGLTSSMLFCLANSNYERIHSRTMLLARGVQAFLPLMSTWWLLASLTNLALPPSINLIGELFVTMTSFSWSNITIILMGLNMLITALYSLYMLTMTQRGKPTYHMYNLNPSLTRENTLMTMHMFPLLLFILNPNTILGPTY------MNMLTSF-TLITLMILTLPVIMN---MTDIHKN-FPYTLYVKSS-IVCAFTTSLIPTMLFIFSGQETTISNWHWMTIQTMKLSMSFKLDHFSMLFMPVALFVTWSIMEFSMWYMHSDPKINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYSRTDANTAALQAILYNRIGDIGFILAMAWFLMYSNSWELQQMMMPNYD-SNMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNKIIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMATIGINQPHLAFLHICNHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKSMPLTASSLVIGSLALTGMPFLTGFYSKDSIIEFTSTSNTNAWALTITLIATS-MTAIYSTRIIFYALLNQPRFTTSVTINENNPLLTNSIKRLTLGSIFAGFFLINYTLPMNTPQTTMPFYLKTLALMMTITGFALAMELNLMTNNLK--FKPSSHMFKFSSSLGFYPMTMHRLIPLFNLHLSQNTASLLLDLIWLEKIMPKSISKLQMLSSI--SVSTQKGMIKLYFLS---FLMSM--LFIPLLIM----------------- +>Equus_ovodovi_ +----MNENLFASFATPT-VMGLPIVILIIMFPSILFPSSN-RLINNRLISIQQWLVQLTSKQMMAIHNNKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVFMGFRHKTKAALAHFLPQGTPIFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISPSTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFINIVSMI-LTLFIVFQLKISKHSYPT-HPEAK-TTKMTKH-FTP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLALPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMIWEAFASKREVSTVELTSTNLEWLHGCPPPYHTFEEPAYVNL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISSMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLVASRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEEWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTLLLALGLLTNILTMYQWWRDIIRESTFQGHHTLIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMLQGLFITISLGVYFTLLQASEYYEASFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVVVHLLFLHETGSNNPSGIPSDMDKIPFHPYYTIKDILGLLLLILLLLTLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALIPTLHMSKQRSMMFRPLSQCVFWLLVADLLTLTWIGGQPVEHPYVIIGQLASILYFSLILIFMPLASTIENNLL---KW--------MF--------MINILLLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADALKLFIKEPLQPLTSSTSMFIIAPILALTLALTMWIPLPMXXXXINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLITTQEYLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNIFTTTLFLGAFHNPYLPELYSINFTIKALLLTCSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMLSSI-P-PQT--MNP-LILTIILMTVFLGTMIVMMSSHWLMIWIGFEMNLLAIIPILMKKYSPR-AMEASTKYFLTQATASMLLMMAIIINLMHSGQW--TITKIFNPTASIIMTSALAMKLGLTPFHFWVPEVTQGISLTSGLILLTWQKLAPMSILYQISPSINLNILLTM-AVLSILVGGWGGLNQTQLRKIMAYSSIAHMGWMXXXLXYNPTLTMLNMLIYIVMTLTMFMLFIHSSSTTTLSL---SHTWNKTPLTTTLILITLLSMGGLPPLSGFMPKWMIIQELTKNSSIILPTLMAIMALLNLYFYMRLTYSTSLTMFPSTNNMKMKW-QFE-AKQITLL-------PPLIVASSLLLPLTPMLSILD---MN-LMLTLLTNTLLASLLVLIAFWLPQLNIYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNIMLIMALILISLLAISLAYEWTQKG--LEWTE-MSLVHINIFLAFTVSLVGLLMYRSHLMSSLLCLEGMMLSLFVMATMMVLNTHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGVDHVQNLNLLQCMLKIIIPTIMLMPLTWLSKKNMIWINTTTYSLLISLISL-SLLNQPSNNSLNFS-LMFFSDPLSAPLLVLTTWLLPLMLMASQHHLSKEPLIRKKLYITMLTMLQTFLIMTFTATELISFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALISIQNLTGSLNFLLIQYWNQTLP-NSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTMLNP-XXXXXXXXXXXXXLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSNITIILMGTNITITALYSLYMLITTQRGKYTHHINNIKPSFTRENALMALHMTPLLLLSLNPKIILGFTY--------MFSSL-MLVSLSVLTLPIMSS---ILNTHXX-XXXXXHVKNI-ISYAFITSLIPTMMFIHSGQETIISNWHWVTMQTLKLSLSFKLDYFSMIFVPVALFVTWSIMEFSLWYMHSDPYITRFFKYLLTFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFIMAMAWFLFNTNTWDLQQIFMLDPN-LTNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQSLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFNAMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-LTAVYSTRIIFFALLGQPRFLPLTSINENNPFLINSIKRLLIGSIFAGFFISNNIYPTTVPEMTMPTYMKLTALAVTILGFTLALELSLITHXXX--XXHPTNMFKFSNLLGYYPTIMHRLPPLANLSMSQKSASLLLDSIWLESILPKSISQFQMKTSI--LISTQKGQIKLYFLS---FLITL--TLSMLLF----------NLHE---- +>Dasyurus_hallucatus_northern_quoll +----MNENLFAPFICPT-IMGISTLPIIMIFPCLLFTTPK-RWLPNRIQILQIWLIRLITKQMMTMHNNLGRTWTLMLMTLILFIATTNLLGLLPYSFTPTTQLSMNISMAIPLWMGTVVLGFRNKPKASFAHFLPQGTPTPLVPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLISSAALTLIS-INILLTSITFIVLFLLTILELAVAMIQAYVFTLLVSLYLHNNTMPQLNTSAWFYVAGLTI-INIFCLFQLQLVGIEMIYIYPPEE-VLKLPEI-PFP-W-EKKWTKIYLP-LS-SALLL---MFVTRWLFSTNHKDIGTLYLLFGAWAGMTGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYAGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDVWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNVLSSIGSFISLTAVILMVFIIWEAFASKREVSSVELTTTNIEWLYGCPPPYHTFEQPVLIKA----------MPYPMQLGFQDATSPIMEELTYFHDHTLMIVFLISSLVLYVLMLMLTTKLTHTSTMDAQEIETIWTIMPAIILVLIALPSLRILYMMDEIFNPYLTVKAMGHQWYWSYEYTDYEDLSFDSYMVPTQDLNPGQLRLLEVDNRVVLPMELPIRMLISSEDVLHAWAVPSLGLKADAVPGRLNQSTLTSTRPGVYFGQCSEICGSNHSFMPIVLEMTTLKYFENWSHMMQT---------MTHQTHAYHMVNPSPWPLTGAMSAFLLTSGMIMWFHFHSSLLLLMGLSTMLLTMYQWWRDIVREGTYQGHHTPVVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLSPALELGGCWPPVGIHPLNPLEVPLLNTAILLASGVSITWAHHSLMEGSRKQMIQALMITIALGLYFTILQATEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSLFLIVCLIRQLFYHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNMRKNHPILKIINHSFIDLPAPSNISAWWNFGSLLGLCLIIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNHGWLLRNLHANGASMFFMCLFLHVGRGIYYGSYLYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLAEWIWGGFAVDKATLTRFFAFHFILPFIIMALTIVHLLFLHETGSNNPSGINPDSDKIPFHPYYTIKDTLGFMFLILMLLLLALFSPDSLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVIALLMSILILLIIPLLHTANQRSMMFRPVSQTLFWILTANLITLTWIGGQPVEEPFIIIGQLASMSYFMLILVMMPLAGLFENYMLK-PEW--------MF--------TINLLIYIIPILLAVAFLTLIERKMLGYMQFRKGPNIVGPYGLLQPFADAVKLFTKEPLRPLTSSISIFIIAPILALTIALTIWTPLPMPNTLLDLNLGLIFILSLSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVSLAIILLSIMLINGSFTLKTLSITQENLWLIITTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIAMNAITTILFLGPSLTPNLSHLNTLSFMLKTLLLTMVFLWVRASYPRFRYDQLMHLLWKNFLPMTLAMCLWFISLPIALSCI-P-PQL--MSP-YVLMILTLSLFIGTCLTIFSNHWFTAWMGLEINTLAIIPLMTAPNNPR-STEAATKYFLTQATASMLMMFAIIYNAWSTNQW--ALPQLSDDWISLLMTVALAIKLGLAPFHFWVPEVTQGIPLLTGMILLTWQKIAPTAILFQIAPYLNMKFLVIL-AILSTLVGGWGGLNQTHLRKILAYSSIAHMGWMIIIVQINPTLSIFTLTIYVMATLTTFLTLNLSNSTKIKSL---GNLWNKSATATIIIFLTLLSLGGLPPLTGFMPKWLILQELINNGNIITATMMALSALLNLFFYMRLIYASSLTMFPSINNSKMQW-YNNSMKTTTLI-------PTATVISSLLLPLTPLFVTLY---MN-LMLTLIINTALATLVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQLPTTNTMLILSYSIIILLTGGLAYEWFQKG--LEWTE-MLAINLNLTVAFMLALTGVLVYRSHLMSTLLCLEGMMLSLFILMTLLIVHFHMFSMSMAPLILLVFSACEAGVGLALLVKISSTHGNDYVQNLNLLQCMLKILTSTFMLIPLTWFSKKSWLWINTTTHSFIISIWSL-TLFYHSSDLGYNYN-NSFSLDSLSGPLLILSCWLLPLMIIASQSHLAHEPLVRKKIYLTMLIILQLSLIMAFTASELIMFYVLFETTLIPTLIMITRWGNQNERLNAGLYFLFYTLVGSLPLLVALLYMHNNLGSLHMLTMTLMSPPLE-TSM-----STSLLWYACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITAFTEP-TTSTMCYPFMILSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPMGFMGATTLMIAHGLTSSMLFCLANTNYERIHSRTLILIRGLQMILPLMCAWWLLASLANLAQPPSINLLGELLVIMTSFSWSNFSLILLGTNTVITAMYSLYMLITSQRGKFTNHTYPMKPTFTREHILMILHLFPLLMISISPKFILGITY---MKVINYLLNTFLLLTIIMITFPLMYN---MLLPHKT-NNFPLLCKSM-IKLAFFTSLMPLIFFICSGQESTITNWQWFSMNTFNLTMSFKLDYFSVIFIPVALYVTWSILEFSIWYMHSDPNIHRFFKYLIIFLFTMIILVSANNLLQLFVGWEGVGIMSFMLIGWWFGRTDANTAALQAVLYNRIGDIGFMLAMACLMINNNSWEIQHIFMTNVD---TLTLIGMILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFNPTMHNNQTALTTMLCLGGITTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVALGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLLMILPITSSTIMLGSLALMGTPFLAGFYSKDAIIETMNASYVNTWALCMTLIATM-LTAFYSLRVIHFVLLNEPRFLPLSTMTENNPNMINPIMRLALGSILAGFLLTTSIPPTTTTPMTMPTISKMSALAVTITGILISTELNSLTNKMP--IIPLIHTHNFSNMLGYFTYIFHRLNPLANLQMGQHIATMLIDLGWYEKTGPKGQASLHASMSS-SITLTQKGLIKYYFLS---FMISM--TLVLLIL------------------ +>Macrotis_lagotis_bilby +----MNENLFAPFITPS-IMGITTLPIIMFFPCLILSTPK-RWLPNRIQTLQIWLIRLITKQMMTMHNKRGRSWTLMLMSLILFIASTNLLGLLPYSFTPTTQLSMNIGMAIPLWMGTVVMGFRNKPKTSLAHFLPQGTPTPLVPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLSLAS-ISIMVSTITFIILFLLTILELAVAMIQAYVFTLLVSLYLHDNSMPQLDTSTWLLVILLMI-VALFCVYQLKMMNQTMLSIYQQNDKNIL-VTQ-QLP-W-EKKWTKIYLP-HS-SPLLS---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYMLSDMWAKIHFLIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIMSSIGSFISLTAVILMIYIIWEAFASKREVSSVELTTTNIEWLYGCPPPYHTFEQPVYIKS----------MPYPAQLGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETIWTIMPAVILVLIALPSLRILYMMDEIYNPYLTVKAMGHQWYWSYEYTDYEDLTFDSYMIPTNDLNPGQLRLLEVDNRLVLPMELPIRMLISSEDVLHAWAVPSLGLKADAIPGRLNQVTLTSSRPGVFYGQCSEICGSNHSFMPIVLEMTTLKYFEKWSSMMQ----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGMIMWFHFNSTLLLTIGLTCLMLTMYQWWRDIVREGTFQGHHTPVVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLAPTPELGGCWPPVGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQMIQALSITIALGLYFTALQAMEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCLMRQFYFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKTHPLMKIINHAFIDLPAPSNISAWWNFGSLLGICLIIQMLTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNMHANGASMFFMCLFIHVGRGIYYGSYMYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIVTALVIVHLLFLHETGSNNPTGLNPDSDKIPFHPYYTIKDTLGFIMMILALLLLTMFSPDMLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLIIPLLHTSKQRSLMFRPISQTLFWLLTSDLLILTWIGGQPVEQPFIIIGQIASITYFLIIIAFMPMAGLFENYMLK-PKW--------MF--------IMNLLLYIVPVLLAVAFLTLIERKVLGYMQFRKGPNIVGPYGLLQPFADAVKLFTKEPLRPLTSSVSMFIIAPILALTLALTIWVPLPMPQTLIDMNMGLLFILALSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSFTLKSLITTQENMWLIMPAWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIVMNAMTAILFLGSSIVENFKYLNTASFMTKTMLLTILFLWIRASYPRFRYDQLMHLLWKNFLPITLACCLWFISIPIALSCI-P-PQI--MSP-YILMIISLSLLLGTSLTIFSTHWLMAWMGLEINTLAVIPMMTYPNNMR-NTESAIKYFLMQATASMIIMFAIIYNSWMTNQW--TLFQVSDNLAITLMTLALAMKLGLAPFHFWVPEVTQGIPLMSGMILLTWQKIAPTSIMFQISPSMNMNILITL-AILSTMLGGWGGLNQTHLRKILAYSSIAHMGWMTIIVMINPSLTILNLIIYIITTLTTFLSLNFTSMTKINML---SNTWNKSTSITIILLLTLLSLGGLPPLTGFMPKWLIIQELATTNNITIATLLALSALLNLFFYMRLIYVSTLTIFPSNNSSKFQW-FHQPTKHNYMI-------PSLTILSTMLLPLSPLMILLT--MMN-LIITLMINSFLATIIVIIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWAIQLPNLNTMLILSYCLILLLTAGLAYEWLQKG--LEWTE-MNSINLNLIMAFSLALLGVLIYRTHLMSTLLCLEGMMLSLFILMALVISYFHMSSASMAPLILLVFSACEAGVGLALLVKISASHGNDYVQNLNLLQCMLKIIIPTAMLVPLTWYSNNKWVWINSTSHSLLISTISL-TYMYHYSDLGYNYN-SSFSIDSLSGPLIVLSCWLLPLMIIASQNHLNKETYSRKKTYITMLIILQLSLIMAFSSSELIMFYILFETTLVPTLIIITRWGNQNERLNAGLYFLFYTLVGSLPLLVALLYLHNQLGSLHMLHTLINSYNMN-LSF-----SNSMLWYACMIAFMVKMPLYGVHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITMFTNP-STMFLAYPFIILSMWGMVMTS--SICLRQTDLKSLIAYSSVSHMGLVIIAALMQSTLSFMGATTLMIAHGLTSSMLFCLANTNYERIHSRILILARGLQMILPLMCTWWLLASLANLALPPSINLLGELTVIVSSFSWSNFSIILLGVNTVITALYSLHMLTTSQRGKLTHHITPIYPTHTREHLIMALHMIPLITITLSPKFILGLTY------MNNLINSTLLMSIMLLTLPIMLN---LIYPYKT-DKFPQYCKNM-IKMSFLTSLAPMLMFMYQGLESTVTNWQWFSIASMPINMSFKLDYFSIIFIPIALYVTWSILEFSMWYMHSDPNIHRFFKYLIMFLFTMIILVSANNLIQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDIGFILSMAWLMINNNSWDLQHIFMTDMN---TLALMGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPMTKNNPTILTMAMCLGAITTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLLPILPITTSALTVGSLALMGTPFLAGFYSKDSIIEAMNTSYVNSWALLMTMVATS-LTAMYSMRIIYFALLNQPRFLPLSPLNENHPNLINPILRLAIGSIFAGYILTMNMPPMYITPTTMPMSTKLSALIVTIMGLLLALELNALTNKLP--LKNVIHTHNFSNMLGYFTHLFHRSYPMANLHLGQHIATMLIDLNWFEKTGPKGQANLHSHLSS-SITSLQKGMIKTYFLS---FIISI--IMVMLII------------------ +>Myrmecobius_fasciatus_numbat +----MNENLFASFICPS-IMGVSTLPIIIMFPCLLLTTPK-RLLPNRIQTLQIWLIRLITKQMMTTHNKLGRTWSLMLISLILFIATTNLLGLLPYSFTPTTQLSMNITMAIPLWMGTVVMGFRNKPKASLAHFLPQGTPTPLIPMLVMIETISLFIQPLALAVRLTANITAGHLLIHLIGSAALALLS-ISITLSCLTFVILLLLTILELAVAIIQAYVFTLLVSLYLQENTMPQLETSTWFYVSCFTV-LGLFCAFQLKIVGIEMIYIYPPEE-VLKLPEI-PFP-W-EKKWTKIYLP-LS-SALLS---MFITRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAVSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIVSHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYLLNDLWAKIQFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNVLSSIGSFISLTAVILMIFIVWEAFASKREVSTVELSTTNIEWLYGCPPPYHTFEHPAFVK-----------MPYPMQLGFQDATSPIMEELMHFHDHTLMIVFLISSLVLYVLILMLTTKLTHTSTMDAQEVETIWTIMPAVILVMIALPSLRILYMMDEILNPYLTVKAMGHQWYWSYEYTDYEDLTFDSYMIPTQDLLPGQFRLLEVDNRLVLPMELPIRMLISSEDVLHAWAVPSLGLKADAVPGRLNQATLTSTRPGVYYGQCSEICGSNHSFMPIVLEMTTLKYFENWSCAMQQM--------MTHQTHAYHMVNPSPWPLTGAISALLLTSGLTMWFHFHSFTLLMMGLMTMLMTMFQWWRDIVREGTFQGHHTPVVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLSPAHDLGGCWPPTGIHPLNPLEVPLLNTAILLASGVSITWAHHSLMEGNRKQMIQALSITILLGLYFTILQATEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSLFLIVCLLRQLYYHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKTHPLMKIINHSFIDLPAPSNISAWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNLHANGASMFFMCLFLHVGRGIYYGSYLYKETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKPTLTRFFALHFILPFIITALVIVHLLFLHETGSNNPSGINPNSDKIPFHPYYTIKDALGLVLMLVPLLTLALFTPDLLGDPDNFSPANQLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLLIIPFLHTSKQRSMMFRPVSQTLFWILAANLLTLTWIGGQPVEHPFIIIGQLASILYFTLILILMPLAGLFENYMLK-PKW--------MF--------FLNLLLYIIPILLAVAFLTLIERKMLGYMQFRKGPNIVGPYGLLQPFADAVKLFTKEPLRPLTSSISMFIMAPILALTIALTIWTPLPMPNTLMDLNLGLLLILSLSSLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKTLVITQENMWLIITTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIAMNAMTAILFLGSSLSSSLTNIDTLSFVTKTLMLTMAFLWIRASYPRFRYDQLMHLLWKSFLPMTLALCLWFISMPITMACV-P-PQM--MSP-YILMAISISLFTGTCLTLFSTHWLTAWIGLEINTLAIIPMMTYPNNPR-STEAAIKYFLTQATASMLMMFAIIYNAWSTNQW--TLFQLSDQWASTTMTIALSIKLGLAPFHLWVPEVTQGIPLLSGMMLLTWQKIAPTAILYQIAPCLNMNIMITL-ATLSTILGGWGGLNQTHLRKILAYSSIAHMGWMAIIVHINPTMTILNLIIYIFATLTIFLTLNYSTVTKIKSL---ANLWNKSAPSTIVILLTLLSLGGLPPLTGFMPKWLILQELIISTDITMATLMAMSALLNLFFYMRIIYASSLTMFPTTNNSKMQW-YFSSSKPFTMI-------PTITIISSMLLPMTPLFTTLT---MN-LILMLLTNSLLATVVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQFTTTSTMLTLSFSLIILLTAGLAYEWFQKG--LEWTE-MLTINLNLIMAFLLALMGVLIYRTHLMSTLLCLEGMMLSLFIMMCLLMSHFHMFSMAIAPLILLVFSACEAGIGLALLVKISGTHGNDHIHNLNLLQCMLKILMPTLMLIPLTWCSKKSWMWVNATTHSFLISIWSL-TLLHHSTDLGYNYN-SSFSLDPLSGPLLVLSCWLLPLMMIASQNHLMHEPLTRKKVYLTALITLQLSLIMAFSSSELIMFYILFETTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALLYLHHNLGSLHILTVTLKAPALN-TTM-----STSLLWLACMMAFMVKLPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITTLTEP-VTTNMCYPFIVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMGLVIVAALMQSPVSFMGATVLMIAHGLTSSMLFCLANTNYERTHSRTLILTRGLQAILPLMCTWWLLASLANLAMPPSINLLGELMVIITSFSWSNFSIILLGVNTVITAIYSLHMLITSQRGKFTHHMKPIKPTFTREHALMILHLLPLLIISTNPKFILGLTY---MKVINHLFNSTLSLSILMLALPLVYG---IVFPHKT-QNFPMLCKNT-VMISFFISLIPLTLFIYSNQETTITNWQWFSMNTFNMTMSFKLDYFSIIFIPIALYVTWAILEFSMWYMHSDPYIHRFFKYLTTFLFTMIILVSANNLFQLFIGWEGVGVMSFMLIGWWYGRTDANTAALQAILYNRIGDIGLMLSMAWLMINANSWDMQHILMMDIN---TLALLGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNQTALTSMLCLGAITTLFTAICAMTQNDIKKIVAFSTSSQLG--LMMVTLGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLTHLPITSSAIMLGNLALMGTPFLAGFYSKDSIIEAMNMSNINSWALLMTMVATV-LTAAYSTRMIYFTLLKEPRFMPTSPLNEDNPNLTNPITRLALGSVFVGFLLTMNIPPTTMIPTTMPTMTKLSAIVATITGIMVAMELSSLTNKLP--NKHLISTHNFSNMLGYFTHIFHRLTPLTNLQMGQHIATMLIDLNWYEKTGPKSQANIHSHLAS-KITSNQKGLIKVYFLS---FMVSM--LIIFITL------------------ +>Simias_concolor_Simakobou +----MNENLFTPFTTPT-LLELPVVVPIVLFPTLLLPTSK-YLINNRLITIQQKLVQLVLKQMMAIHNTKGQAWSLMLMSLIIFIASTNFLGLLPYSFTATTQLSMNLAMAIPLWAGTVIMGLRFKTKSSLAHFLPQGTPTPLIPALVVIETISLFIQPMALAVRLTANITAGHLLMHLIGSATLALLT-ISLFATSLTLVLLVLLTILEMAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWLITIMAML-PALYLIMQLKLLNTTYHF-SPSQK-VLDMQMI-NNS-W-QLKWTKIYLP-LS-QLQHS---MLINRWLFSTNHKDIGTLYLLFGAWAGTAGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNFSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDEVCAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSMGSFISLVAMLLMIYMIWEAFASKRKVLLIEQPTSNLEWLHGSPPPYHTFDEPAFIKV-K--------MPHPVQLGLQDATSPIMEELIAFHDHAFMIVSLISFLVLYVLSSVLTTKLTNTNITDAQEMETIWTILPAIILVLIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAIPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGALSALLMTSGLIMWFHFHSTTLLMLGLLTNMLTMYQWWRDIIRESTYQGHHTMPVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPHLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKEMIQALLTTILLGIYFTLLQMSEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLAVCLVRQLFYHFTSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTPTRKSNLIMKLINHSLIDLPTPSNISTWWNFGSLLATCLILQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGITLLLMIMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNIVQWVWGGYSIDSPTLTRFFTFHFTLPFIITALTILHLLFLHETGSNNPCGIPSNPDKIPFHPYYTIKDILGLTLFLLILMMLVLFLPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLMSILILMIIPLLHKSKQQSMMFRPLSQLVLWFLVTILLTLTWIGSQPVNQPFIMIGQAASMMYFTTILILMPLASMIENNLL---K---------MF--------TMNLLLIILPIIAAMAFLTLTERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYIIAPALAFSIALLLWMPLPMPDSLINLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIIMLSVLLMSGSFNLHTLITTQEHLWLLLPSWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIILMNALTVTIFLGTLYPTHSPELFTTCFIIKTLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLALLMWYISTPIMISGI-P-PQS--MNP-LAQLVIYSTMIMGTLITSLSSHWFLAWAGLEMNMLAFTSILIKKANSR-STEAATKYFLTQSTASMILMMAIMYNNLYPGQW--TLLSNPDQLSALIMTTALAMKLGMAPFHFWVPEVTQGTSLTSGLLLLTWQKLAPISIMYQMYPSINTTILMTL-STLSIMAGSWGGLNQTQLRKILAYSSITHMGWMMMTLTYNPNITTFYLLMYIIMTSTAFLALNLNSNTTTLML---SRTWNKLTWLMPLMASTLLSMGGLPPLTGFLPKWITIQELTKNNNFIMPSIMIIMALINLYFYLRLIYIISMTLLPTSNNTKMKW-QFENTKPTPFI-------PSLIILTTLLLPVSPTTLTTL---MN-LALALTINTLLTLLLMIIMFWLPQLNSYTEKTNPYECGFDPLNSARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPVMIKSSIMLIIILTLSLAYEWTQKG--LDWTE-MPIIYMNIVLAFMISLLGMLIYRSHLMSSLLCLEGMMLSLFMMSTLMALNMHFPLANIVPVTLLVFAACEAAVGLALLISISNTYGLDHIHNLNLLQCMLKMIIPTMMLLPTTWFSKNNLIWINLTTHSLIISLIPL-LFFNQINNNLTSHS-THLSSDPLTTPLLTLTAWLLPLMIMASQYHMYNESPLRKKLYLSMMIFLQISLIMTFMATELILFYILFETTLIPTLIIITRWGNQAERLNASTYFLFYTLAGSLPLLIMLMFTHNNLGSLNIPLLTLMAQNMT-TTW-----SHNLIWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIMASLIQTPWSFTGAIILMIAHGLTSSMLFCLANSNYERTHSRIMMLSRGLQTLLPLMAFWWFVANLTNLALPPTINLIGELLVVMTSFSWSHITIVLTGLNMLVTALYSIYMFITTQRGVLTPHIISMKPSFTRENMLMFMHISPIILLSLNPSIIMGFTP--------MYTST-VMLTLTSLTFPIIIA---LTKPNKS-HLYPNYVKTI-MMFTFIINLLPTTLYVFLDQDTIISNWHWMTIQSLEITLSLKLDYFSMMFTPIALFITWCIMEFSLWYMSSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAALQAILYNRIGDVGFILAMAWFILHYNSWDFQQMFALNSS-PDMLPLVGLLLAAMGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNMLIQSLTLCLGAITTVFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKMMPLTSTSLTIGSLALAGMPFLTGFYSKDLIIETANTSYTNAWALSITLIATS-LTSAYSTRTIILTLTGRPRFSTSMYVNENNLALLNPMKRLTMGSLLAGFLIINNISPTTLPQLTMPYYLKLLALCVTALGFLMALDLTLMTNNLK--MKNPSHMFNFSNMLGYFPITIHRMIPYQNLIMSQNLAFLLLDLIWLEKSMPKTISYTHITTAI--TTTTQKGMIKLYFLS---FLIPL--ALISLLMM----------------- +>Damaliscus_pygargus_ +----MNENLFASFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWLLQLVSKQMMSIHNTKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLALMN-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTTILSMF-LVLFIIFQLKISKHNFYH-NPELV-PTKTLKQ-NTP-W-EMKWTKICLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPAYVNL-K--------MAYPMQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAVPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDIIRESTFQGHHTSAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCVFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVVMPTASTIENNLL---KW--------MF--------MLNILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTVKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILMTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGISLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SMLSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYITMTSTMFTLFMANSTTTTLSL---SHTWNKAPIMTALILVTLLSMGGLPPLSGFMPKWMIIQEMTKNSSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTFL-------PTMIVMSTMLLPLTPILSILE---MN-LMMALLTNLTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLTTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMTAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINPTLHSLLISLTSL-LLMNQFGDSSLNFS-LTFFSDSLSMPLLILTMWLLPLMLMASQHHLSKENLTRKKLFISMLILLQLFLIMTFTAAELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYIQNTVGSLNFLILQYWVQPVA-NSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTDFMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLHTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMSIFSWSNTTIILVGINMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGTLY--------MFSSL-TLMTLLLLTIPIAMT---NSNTYKT-PNYPYYVKTT-ISYAFIISMIPTMMFIHTGQETIISNWHWLTVQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLEPA-NSNLPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSIMLCLGAITTLFTALCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLVGSLFAGFILSNNIPPMTVPQMTMPCYLKMMALAVTILGFILALEINNMTYHLK--FNYSSSPFKFSNQLGYYPTIMHRLAPRINLTMSQKSASSLLDLIWLENILPKTTSLIQMKAST--MITNQKGLIKLYFLS---FLVTI--LISMTLL----------NFHE---- +>Madoqua_saltiana_Salts_dikdik +----MNENLFASFITPM-VLGLPLVTLIVLFPSLLFPTSN-RLLNNRLISLQQWALQLVSKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISPTTAFITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYY-NPELT-LTKTPKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVILISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLALGLTTNMLTMYQWWRDVIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITIALGIYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGVCLVLQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGILLLIMGLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCLFWVLVADLLTLTWIGGQPVEHPYIIIGQLASILYFTLILVLMPVASTIENNLL---KW--------MF--------MINILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYVPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPVLLSSI-P-PQT--MNP-IIFTIILMTVLSGTLIVMISSHWLLIWMGFEMNMLTIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVANLFNPTASALMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYQISQSINLNLILIL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLTIYIIMTSTMFVLFMINSTTTTLSL---SHTWNKTPVITVLILVTLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAMTALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTFL-------PTMVVMSTMLLPLTPMLSTLE---MN-LMLALLTNVTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLATSLAYEWAQKG--LEWTE-MSLVYMNIMVAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKSSMLWINSTTHSLLISFTSL-LLMNQFNDSSLNFS-LIFFSDPLSTPLLILTMWLLPLMFMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTATELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYMQNTTGSLNFLILQYWVQLMP-SSW-----SNILMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLFLNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNILPSFTRENTLMSLHILPLLLLSLNPKIILGPLF------MNMYSSF-TLTTLLLLTVPILAT---SFNTHKT-PNYPLYVKTT-ISCAFLTSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGLILAMAWFLTNLNTWDLQQIFILNPA-NSNLPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPLLINSIKRLLIGSLFAGFIISNNIPPMTVPQMTMPSYLKMMAMGVTVLGFILALEISNMTYNLK--FKFPSNMFKFSNLLGYYPMIMHRLTPYINLTMSQKSASSLMDLIWLENILPKTTSLIQMKMSI--TITNQKGLIKLYFLS---FLITI--LISIMLL----------NFHE---- +>Hylomys_suillus_short-tailed_gymnure +----MNENLFTSFITPM-FLGIPIFTLIIMFPTLFFPSPS-RLINNRVITIQQWLIKSISKQMMLIHNPKGQSWTLMLLSLILFIGSTNLLGLLPHSFTPTTQLSTNLGMAIPLWAGAVILGFRFKTKASLAHFLPQGTPLALIPMLILIETISLFIQPMALAVRLTANITAGHLLIHLIGGATMVLTS-ISTPTATLSFLILLLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFWTIIFTL-ITLFMIFQLKLSNYKIFH-VPETK-KIKNFIY-NNP-W-ETKWTKICSP-HS-LPLYS---MFINRWMFSTNHKDIGTLYMIFGAWAGMVGTSLSLLIRAELGQPGALLGDDQIYNVIVTAHAFIMIFFMVMPIMLGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALTQYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGPINWAPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIGGFVHWFPLFSGYTLDATWAKIHFVVMFIGVNITFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSIGSFISLTAVMMMVFMVWEAFASKREVEKVELTSTNIEWLYGCPPPYHTFEEPTFINS-K--------MAYPFEFGLQDASSPIMEELMYFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEMDNPSLTVKTMGHQWYWSYEYSDYEDLCFDSYMIPTSDLSPGQLRLLEVDNRMVIPMETTIRILISSEDVLHSWAIPSLGLKTDAIPGRLNQMTLLATRPGVYYGQCSEICGANHSFMPIVLESVPMEAFEKWSCSMT----------MTHQTHAFHMVNPSPWPLTGALSALLLTSGLIMWFHFNSYFLLLLGITTNLLTVFQWWRDIIREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGYWPPAGIQPLNPLEVPLLNTTVLLASGVSITWAHHSLMEGKRMNTIQALAMTILLGVYFTVLQAMEYYEAPFTISDGVYGSTFFMATGFHGFHVIIGSSFLTVCFIRQLLYHFTNKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKSHPLLKMINNTFIDLPTPSNISSWWNFGSLLGLCLIIQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFIHIGRGMYYGSFLMLETWNIGVILLLSVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDLVQWIWGGFSVDKATLTRFFAFHFILPFIVSALAAIHLLFLHETGSNNPSGLNSDSDKIPFHPYYSYKDILGGAFLILLFLTLVLFFPDLLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVMALILSILILMLFPLLHTAKQRSMMFRPISQCLFWLLVADLLTLTWIGGQPVEYPFILIGQLASIIYFLIILIFIPVAGLIENYFL---TWN-------MF--------FVNILCLIAPILVAVAFLTLVERKVLGYMQLRKGPNVVGPFGLLQPIADAIKLFTKEPLRPTTSSSLLFILAPILALTLALTMWLPITLPMPLLNLNLGLLFLLAVSSFSVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSILLFSGSFNLSSLIISQEYIWLIFPSWPMAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIILMNTLTAILFFGPFHNPYYPEMFSTFIIPKILLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHSSMTLCFSNV-P-PLI--MNP-IIFTSMILMIFLGTMIVLFSSHWFLSWVGFEMNLFAMIPLITIKKSPR-STEAAVKYFMTQASASMIFMLAISINYYLSGQW--TINNMTDPASLTLLIMSMLMKLGTAPFHFWVPEVTQGIPLKIGMILLTWQKIAPLFILYQSTQCTKNYTIIMSLALLSILVGGWGGLNQLQLRKILAYSSIAHMGWTLMIMTLNPTLMVFNLIIYMIITLALMTLLNHLNTTSTSML---SQTWNSNFVITSIILIILLSLGGLPPLSGFSPKWLIIQEMTKSYNIILTTIMAMTALLNLMFYLRIIYASSMTLFPSTSQTKMKW-MYKKQKINIFT-------SPLISMSILLIPLTPMYIILT---MN-MLISIFINFSLSLFLISLAFWLPQLNLYYEKASPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWAVQNYNLLFSVTIALLLISILALSLAYEWINKG--LEWSE-MQFTTLNVILAYIMALVGLFMYRSHLMSSLLCLEGMMLSIFILLSITMLPFNDTSTMMLPLTLLVFAACEAAIGLSLLVMVSNNYGVDYVQNLNLLQCMLKILIPTFMLLPLTWLSPNKLIWINPTIYSLLISSISL-LFIYQQDMPNLNFS-SMFFSDSLSSPLLILTTWLLPLTLIASQNHLKSENPNSMKIFISLLISLQFILIMTFSATEMILFFILFEATLIPTLIIITRWGNQPARLNAGTYFLFYTLMGSLPLLIALTYLQNYYGSLNFLLFHFWPNLYLLDNW-----SSPLFWLACIMAFMVKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMIRITLFIQP-SMEMMTYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIIAIMIQTPWSFMGATALMLAHGLTSSLLFCLANTNYERTHSRTMILARGLQSILPLMMLWWLLAGLTNLALPPSINLLGELMILTSTFSWSNLTMPLLGLNILITALYTLYMLISTQRGHLTSHLKSIYPTFTREHALMMLHIMPILLLTFNPKIILGTTF------MNLTYLF-FTLTLIILILPIIFP---TK-LSNS-FSFPYYIKNS-VASAFFLSLIPLFNFITSNQESVVIYWNWMTIHNICFSINLKLDYFSIFFIPVALYVTWSILEFSMWYMHSDPNVNKFFKFLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILTMAWFVINLNTWELSQIFLLTTN--HITPLFGLLLAASAKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLVRFHSIIQDNKAIQSMILCIGALTTLYAALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKLLPFTSSSLIIGSLALTGTPFLTGFFSKDLIIESLNTSLTNAWALMTTLIATS-LTAVYSTRMIFFSLLGHPRFHTFNLINENNPSLINPIKRLLLGSIFAGFILSNCIPPSSIPQMTMPTLLKLCALIITIIGFTLALELSMYTHKFK--TPSPSTSMLFSNQLGYFSTVLHRFPVFLNLSLCQKLMTTRTDLTLLEMTMPKLISNTQVKMAL--MITNQKGMIKLYFMS---FLLSL--SLAFITYLYL--------------- +>Rhyncholestes_raphanurus_Chilean_shrew_opossum +----MNENLFAPFITPT-ILGITTLPIIMLLPCLILTSPK-RWLPNRIQTLQIWLIRLITKQMMAMHNKLGQSWTLMLMSLILFIASTNLLGLLPYSFTPTTQLSMNIGMALPLWMGTVLLGFRNKPKVSLAHFFPQGTPTPLIPMLIVIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALSS-ISMAVSTITFAVLFLLTILELAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFMTITLMI-IGLFCIFQLKMLNQTMINITPQDKQIFT-KKE-TLP-W-ENKWTKIYLP-HL-LPLQS---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYMLNDMWAKIHFLIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVLSSIGSFISLTAVILMIFIIWEAFASKREVSAVELTTTNIEWLYGCPPPFHTFEQPVYVKS----------MPYPFQLGFQDATSPIMEELTYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETIWTILPAVILVLIALPSLRILYMMDEIYNPHLTVKAMGHQWYWTYEYTDYEDLTFDSYMIPTQDLNPGQFRLLEVDNRIVLPMELPIRMLISSEDVIHAWAVPSLGLKTDAIPGRLNQATLTSTRPGVYYGQCSEICGSNHSFMPIVLEMATLKYFEKWSSMMQS---------MTHQTHAYHMVNPSPWPLTGALSALLITSGIIMWFHFNSMTLFYIGMTSMLLTMYQWWRDIIREGTFQGHHTPVVQKGLRYGMILFILSEVFFFIGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSILLASGVSITWAHHSLMEGDRKQMIQAMTITILLGIYFTVLQAMEYYEASFTISDGIYGSTFFVATGFHGLHVIIGTTFLIVCLIRQFNFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKNHPLMKIVNDAFIDLPAPSNISAWWNFGSLLGICLVLQILTGLFLAMHYISDTTMAFSSVAHICRDVNYGWLIRNMHANGASMFFMCLYLHIGRGIYYGSYLYKETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKSTLTRFFAFHFILPFVILALAIVHLLFLHETGSNNPSGINPDSDKIPFHPYYTIKDILGLSLMILVLLLLAMFSPDMLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLAIPLLHTSNQRSLMFRPISQTLFWILTADLFVLTWIGGQPVEQPYIIIGQTASILYFMIIIILMPMAGLFEKYMLK-PKW--------MF--------MMNLLLFIVPILLAVAFLTLIERKVLGYMQLRKGPNVVGPYGLLQPFADAVKLFTKEPLHPLTSSISMFILAPILALTLALTIWTPLPMPSNLIDLNLGLLFILALSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKTLTTTQENSWMIFTTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMSMNALTAIIFLGTSIS-NIPHLNTLLFMMKTAALTMLFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCLWFISMPIALSCI-P-PQL--MSP-YVTLIMSISLLLGTSLTLSSNHWLTAWMGLEINTLAIIPMMTTTHHMR-STESAIKYFLTQATASMILMFAIILNAWSTNQW--TLLQISNQWASTLMTIALAMKLGLVPFHFWVPEVTQGIPLTSGMIMLTWQKIAPISILYQISPTLNMNILVSL-AMLSTILGGWGGLNQTQLRKILAYSSIAHMGWMTVVIMIYPTMTLLNLLLYILATLTLFLTLNFSSMTTIKAL---SSMWNKSTPMTLIMFLMLLSLGGLPPLTGFMPKWLILQELVSNNNISSATILALSALLNLFFYMRIIYSSTLTMFPSTNNCKTQW-MYCPTKSLTLI-------PTLAIVSSMLLPLTPLFIILD--MMN-LLITLLTNSLLSIIIVTIAFWLPQLYIYLEKSSPYECGFDPLGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWAIQLSSPTTMLILAYSLILLLTGGLAYEWLQKG--LEWSE-MTTIYLNLILAFTLALSGVLIYRSHLLSTLLCLEGMMLSLFILMALTISHFHMFSLSMAPLILLVFSACEAGVGLALLVKTSNAHGNDHVQSLNLLQCMLKILIPTFMLIPLTWHSKKSWLWINSTAHSMLISSFSL-TYFYQNMDLGYNFN-SSFSMDSMSSPLIILSCWLLPLMMIASQNHLSKESLYRKKMYLTMLIILQLSLIMAFSSSELVMFYILFETTLIPTLVIITRWGNQNERLNAGLYFLFYTLVGSLPLLVALLYLHDNLGTLHIL-----TTTLK-YNTSELTFSSTMLWYACMLAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITIFTEP-ISSYLFYPFIILSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMGLVIIAALMQSTLSFMGASTLMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQMMLPLMCTWWLFASLANLALPPSINLLGELMVIVSSFSWSNFSIILLGINTVITALYSLHMLITSQRGKFTHHLYPINPSFTREHMLMTLHLIPLMLLTMNPKYILGLTY------MNTLLIPSIMLSISMLLFPLLLN---LILPHKT-EHFPKYCKNM-IMMAFFMSLPSTLLFIYSGQETIVTNWQWFSIHTFNISMNFKLDYFSIIFIPIALFVTWSILEFSMWYMHSDPNIHRFFKYLITFLFTMIILVTANNLFQLFIGWEGVGIMSFMLIGWWYGRTDANTAALQAILYNRIGDIGFMLTMACFMINNNTWDFQQILSTNAS---TLALVGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPMMENNPTILTLALCLGSMTTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTIGLNQPHLAFLHISTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLNILPITSSAMMTGSLALMGTPFLAGFYSKDSIIEAMNVSYTNAWALTITLIATT-LTAVYSMRIVFYALLNQPRFLPLSPINENNPNLINPILRLALGSIFAGFILTMNIPPTSSVTMTMPTIIKLSALIVTLMGLAISIELNSLTNQLT--MPYSIHTHNFSNMLGYFTHIFHRASPMVNLHLGQHIATMLIDLNWYEKMGPKGQANFHSLMSS-SMSSLHKGMIKTYFMS---FIISI--LIITFII------------------ +>Blarinella_quadraticauda_Asiatic_short-tailed_shrew +----MNENLFASFATPT-MMGLPIVILIILFPSIMFPAPN-RLINNRLVALQQWLIQLTSKQMMAIHNQKGQTWTLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLMS-INPVTAFITFIILVMLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIMSMI-MTLFIVFQLKLSKYIYPM-NPELK-SLTMLKH-KNP-W-ETKWTKIYSP-LS-LPQQ----MFVTRWLFSTNHKDIGTLYMVFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMLGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGSINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIAGFVHWFPLFTGYTLSSTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVVVMVFMIWEAFASKREVTSVELTTTNIEWLYGCPPPFHTFEEPVYVNS-K--------MAYPFQMGLQDATSPIMEELMSFHDHALMIVFLISSLVLYIISSMLTTKLTHTSTMDAQAVETIWTILPAIILILIALPSLRILYMMDEINNPTLTVKTVGHQWYWSYEYTDYDELNFDSYMIPTTDLKPGDLRLLEVDNRAVLPMEMTVRVLITSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICGSNHSFMPIVLELVPLKVFEKWSSSML----------MTHQTHAYHMVNPSPWPLMGALSALLLTSGLVMWFHFNSMLLMSIGLLANTLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTHELGGYWPPAGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHTIQALFITIALGVYFTFLQAAEYYEAPFTISDGIYGSTFFMATGFHGFHVIVGSTFLMVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMFLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFAFHFILPFIIAALAGVHLLFLHETGSNNPSGLSSDADKIPFHPYYTIKDILGVLLLILVLTSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAFIPLLHTSKQRSMMFRPFSQCLFWILVADLVTLTWIGGQPVEHPFIIIGQLASILYFLLILVIMPITSLFENNLL---KW--------MF--------IINLFTTIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLKPLTSSISMFIMAPILALTLALTMWIPLPMPYSLINMNLGVLFLLAMSSLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLNNLIITQEYSWLLLSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNVLTTTLFLGAFHTMYFPQLYSINFSTKAILLTITFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFSSSI-P-PQT--MNP-LILIMISLTILMGTMIVMMSSHWFMIWLGFEMNMMAIIPMLMKNYNPR-SMEASTKYFMTQATASMILMLAILINLLYTGQW--TIMNITNPMASMLMTLALVMKLGLSPFHFWVPEVTQGVSLYPGMILLTWQKIAPLSILFQIQSSINLQMLLTM-SLLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILAYNPSIMLLNLLVYITMTISTFMLFIHSSATTTLSL---SHTWNKSPIIAILILTTMMSLGGLPPLTGFMPKWIIIQELTKNNSIILPTMMAILSLLNLFFYMRLAYSTSLTMFPTTNNNKLKW-QFENTNQTPLM-------APMIIISTMLLPLTPALILLY---MN-VLLTLIINTILSSILVLIAFWLPQLNVYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDYLNTMITMSLALIILLALSLAYEWSQKG--LEWTE-MSLVHMNIMLAFMIAMVGLLMYRSHLMSSLLCLEGMMLTLFIMGTIMVLNFNFTLANMLPIILLVFAACEAAVGLSLLVMVSNTYGVDYVQNLNLLQCMLKIIISTMMLMPLTWLSNNKFLWINITSYSLLISLTTL-PLFNQPNNNPIYFS-PMFFSDSLSAPLLALTTWLLPLMIMASQHHLMNETEIRKKLYISMLILLQTFLIMTFSATELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIFIQNTMGTLNFTMTQMWTQNIT-DSW-----SNDFLWLACMMAFLVKMPMYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITILLDP-ITKTMAYPFLLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMATWWFLASLTNLALPPTINLIGELFIMLSSFSWSNFTMILMGLNVVITALYSLYMLILTQRGKYSYHINTTKPSFTRENSLMALHMIPLLLLSINPKLILGTMY------MNLYSSA-LLASLLMLILPVIMS---LSNIYKT-NQYPYYVKTI-ISYAFLISLIPTLIFINSGHETVISNWHWMTIQTMKLSLSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPYMNRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMAWFLTNSNSWELQQIFMLDLK-QNNLALLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLLENNTFIQPLILCMGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKALPFTTTSLIVGSLALTGTPFLTGFYSKDLIIEAANTSYTNAWALLITLIATS-LTAIYSTRILYFSLLGQPRCSTLIMVNENNPLLINSIKRLLIGSIFAGFIISYNITPMTTPQMTMPFYLKLTALIVTLTGFILAMELNLMTQNLK--LSKPHNYFMFSNMLGHFPVTMHRLLPSTSLLISQKLSSMLLDLTWMEIILPKSISNFQATSSI--MVSNQKGLIKLYFLS---FLVTF--LTALIMF----------SFHA---- +>Balaenoptera_bonaerensis_Antarctic_minke_whale +----MNENLFAPFMIPM-MLGLPITTLIIILPSILFPTPN-RLVNNRTISIQQWLTKLTSKQLMNVHSPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNVGMAIPLWAGAVITGFRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGETTLVLMS-TSLLTALITFTILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLLTILSMF-LALFVLLQLKISNHSYSP-NPKPT-YTKTQKQ-QTP-W-NTTWTKIYLP-LL---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTGGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWTKIHFMIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTTTNLEWLNGCPPPYHTFEEPAFVNP-KWS------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEVNNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLEIFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLSTNVLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIRPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIALGLYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINDAFVDLPTPSNISSWWNFGSLLGLCLIVQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYAHMGRGLYYGSHAFRETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAIVHLIFLHETGSNNPTGIPSDMDKIPFHPYYTIKDILGALLLILTLLTLTLFAPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAFIPMLHTSKQRSMMFRPFSQFLFWVLVADLLTLTWIGGQPVEHPYMIVGQLASILYFLLILVLMPVASLIENKLM---KW--------MF--------MINILTLILPILLAVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPMLALTLALTMWSPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLATTQEQLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTAILFLGTYYDPHNPELYTTNLIIKTLLLTTSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI-P-PQT--MNP-FIFILLLTTLILGTMMVITSSHWLLAWIGFEMNMMAFIPIMMKNPSPR-ATEASTKYLLTQATASALLMMAVIINLMYSGQW--TITKLFNPTASMLMTVALAIKLGLAPFHFWVPEVTQGIPLATGLILLTWQKLAPLSILYQISPSINLHLMLTM-SLLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILLYNPTLTLLNLLIYITMTFTMFMLFIQNSTTTTLSL---SQAWNKTPIITTLTMLTLLSMGGLPPLSGFMPKWMIIQELTKNDILIMPTFMAITALLNLYFYMRLTYSTALTLFPSTNNMKMKW-QFNSTKRAILL-------PTAIVMSTMLLPLTPMFSILL---MN-LLLTLLTNTTLAMLLVFIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQSNNLNTMLTMALFLISLLAASLAYEWTQEG--LEWAE-MTLIHMNILMAFSMSLVGLLMYRSHLMSALLCLEGMMLSLFVLATLTILSSHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQSLNLLQCMLKFIIPTIMLMPLTWLSKNNLIWINSTTHSLLISFSSL-LLLNQLNDSSLNYS-LIFFSDPLSTPLLILTMWLLPLMLMASQSHLIKEPPVRKKLYITMLITLQALLIMTFTATELILFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNTTGTLNFLLLQHWVQPLS-TSW-----SNIFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSMLNP-LTEHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQVFLPLMATWWLLASLTNLALPPTINLIGELLVVMSIFSWSNPTILLMGTNIVITALYSLYMLIMTQRGKHTHHINNITPSFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLLTSF-ALLTLLILTTPIMVP---NTNSHKN-NKYQSYVKNI-VFCAFLTSLIPAMIYLHTNQETLISNWHWVTIQTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLLASMAWFLFNMNTWDLQQIFMLNQN-PLNFPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLMENSKPIQTVTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPFTTTALIIGCLALTGMPFLAGFYSKDPIIEAATSSYTNAWALLLTLIATS-LTAVYSTRIIFFALLGQPRFPPSTTINENNPLLINPIKRLLIGSIFAGFILSNSIPPMTTPLMTMPLHLKLTALAMTTLGFIIAFEINLDTQNLK--YTHPSNSSKFSTLLGYFPTIMHRLPPYFDLLMSQKLATSLLDLIWLETILPKTTALIQLKAST--LTSNQQGLIKLYFLS---FLITI--ILIMILF----------SYPE---- +>Myotis_formosus_Hodgsons_bat +----MNENLFASFITPT-MMGLPIVALIIMFPSLLFPSTA-RLINNRLISIQQWLIRMTTKQMMAIHSKKGQTWALMLISLIMFIGSTNLVGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISMTTAFITFIILVLLTVLEFAVALIQAYVFTLLVSLYLHDNAMPQLDTSTWFITIISMI-ITLFIVFQLKISKHYYYN-NPEPL-ITKSQKY-LIP-W-ENKWTKIYLP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNINWSPAMLWALGFIFLFTVGGLTGIVLANSSLDVVLHDTYYVVAHFHYVLSMGAVFAIMAGFIHWFPLFSGYTISATWAKIQFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAIMLMIFMIWEAFASKREVLTVELTSTNLEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLSFHDHALMIVFLISSLVLYIISSMLTTKLTHTNTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPSLTIKTLGHQWYWSYEYTDYEDLLFDSYMIPTSELNPGQLRLLEVDNRVVLPTELTIRMLISSEDVLHSWAVPSMGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICGSNHSFMPIVLEMIPFKYFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNTSLLLLMGLTTNMLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVLFFSGFFWAFYHSSLAPTPELGGCWPPTGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRIHMMQALLITILLGLYFTFLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQMNYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLLKIINNSFIDLPAPSSISSWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHLCRDVNYGWVLRYLHANGASMFFICLYLHVGRGLYYGSYMYTETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNTDMIPFHPYYTIKDILGLLLMIMVLLMLVLFSPDMLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAIMPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVENPYIIIGQLASILYFSIIIILMPLISLVENHLL---KW--------MY--------FINLLMMIVPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFIKEPTQPLTSSLMLFIIAPTLALTLALMMWVPLPMPHPLINMNLSMLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSILLMNGSFTLTTLITTQEHTWLIMPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTIILFLGAYNNPLFPELYTTNFATKTLLFTMFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVTLPIILASI-P-PST--MNP-LTLSLVLTTMISGTLIVMTSSNWFMIWVGFEMNMLAIIPLLTKEHNPR-STEAATKYFLTQATASMLLMMAAITNLLHTGHW--SIMKLTNPMASIMMTTALTMKLGLAPFHFWVPEVTQGIPLMSGLILLTWQKLAPLSILYMITPLINMNLLLLM-SIMSVAIGGWGGLNQTQLRKIMAYSSIAHMGWMMAVLTYNPTTMLLNLYIYIPMNITTFMLLMLTSATTTTSL---SHMWNKLPLITVLILTTMLSLGGLPPLTGFLPKWVIIQELTKNNNVIAPTLMTLLALLNLYFYTRIAYTTSLTMFPTMNNMKMKW-QFKNPKQTIQL-------PLMTTISTLILPLAPIMMILE---MN-FILTLIINTLLASLLVVIAFWLPQTNTYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDKLTTMLFMSLFLISLLIISLAYEWVQKG--LEWSE-MSLTHMNILLAFTTSLLGLLMYRSHLMSSLLCLEGMMLSLFVLTTVTILITHTTLASMMPIILLVFAACEAAIGLSLLVVVSNTYGIDYVQNLNLLQCMLKIIIPTIMLIPLTWLSKSNMLWINSTIYSLMISMTCL-PLMNQSCDNSLNMS-MLFFSDSLSTPLLMLTTWLLPLMIIASQHHMAKESPTRKKLYITMMILLQIFLIMTFSATELIMFYILFEATLVPTLIIITRWGGQTERLSAGIYFLFYTLAGSLPLLVALIYTQITLGSLNMLLAQYLTEPPT-CIW-----SDSLLWLAFMLAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMMLSP-TVNFMMYPFMMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIMAILIQSPWSFMGATALMIAHGLTSSLLFCLANSNYERTHSRTMILTRGLQTILPLMAAWWLLASLTNLALPPSINLIGELFVTVSMFSWSNFSIILLGINIIITALYTLYMLITTQRGKYTYHIHNIKPSYTRENTLMSLHLTPLLLLMINPKIILGSVY------MNLMSNF-MLLSLTILVLPLLFS---PNKTSKY-HYYPEYVKTM-ISYSFMISLPPTIMFIQSGQEMMISNWHWITIQTMKLSLSFKLDFFSMTFVPVALFITWSIMEFSMWYMHLDPNINRFFKYLLMFLITMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMTNSNSWELQQIFTLNLN-NTTFPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNKLVQSLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-LTAVYSTRIIFFALLGKPRFPSLILINENNPLLMNPITRLLIGSIFAGFFISNNITPMTIPQMTMPLYLKLTALFVTLMGFTMALELNYMTQNLK--YKHPMNTFKFSTMLGYFPLIMHRLSPLTSLTTSQKSATMLLDLIWLENALPKLITKIQQNTST--MVSSQKGLIKLYFLS---FLITM--ITTLIMF----------NFHV---- +>Myotis_davidii_ +----MNENLFASFITPT-MMGLPIVVLIIMFPSMLFPSTA-RLVNNRLVSIQQWLIRITAKQMMTIHNKKGQTWTLMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISMTTAFITFVILVLLTVLEFAVALIQAYVFTLLVSLYLHDNAMPQLDTSTWFITIVSMI-ITLFIMFQLKISKHHYYN-NPEPL-TTKSQKH-STP-W-ETKWTKIYLP-LS-LPQR----MFINRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTMSQTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMIFMVWEAFASKREVSVVELPSTNLEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLSFHDHALMIVFLISSLVLYIISSMLTTTLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTIKTLGHQWYWSYEYTDYEDLMFDSYMVPTSELSPGQLRLLEVDNRVVLPAELTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICGSNHSFMPIVLEMIPLKHFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNTSLLLLMGLTTNMLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRMHMMQALLITILLGLYFTFLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCYLRQLNYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIINSSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFNSVTHICRDVNYGWILRYLHANGASMFFICLYLHVGRGLYYGSYMYTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLLMIMALLMLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIIIPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPYVIIGQLASILYFSIIIILMPLTSLVENHLL---KW--------MY--------FINLLTMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPMQPLTSSLTLFIIAPTLALTLALMMWIPLPMPYPLINMNLSMLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSILLMNGSFTLTTLITTQEYVWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTIILFLGAYNNPMFSELYTTNFTTKTLLLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVTLPIILASI-P-PLT--MNP-AILSLVLTTMISGTLIVMTSSHWFMIWVGFEMNMLAMIPLLTKQHNPR-STEAATKYFLTQATASMLLMMAAITNLLYTGHW--SIMKLNNPTASIMMTMALTMKLGLSPFHFWVPEVTQGIPLMSGLILLTWQKLAPLSVLYMITPLINMNLLLIM-SLMSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMLAILTYNPTMTLLNLYLYIPMTITTFMLLMLNSATTTTSL---SHMWNKLPLITTLILTTMLSLGGLPPLTGFLPKWAIIQEMTKNNSILMPTLMALLALLNLYFYTRITYTTSLTMFPTANNMKMKW-QFKNPKQMMYL-------PIMTTISTLTLPLAPIMMTLE---MN-FILTLVVNTLLASLLVTIAFWLPQMNVYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDKLVTMLFMSLFLISLLIISLAYEWVQKG--LEWSE-MSLTHVNILMAFTTSLLGLLMYRSHLMSSLLCLEGMMLSLFVLVTVTILITHTTLASMMPIILLVFAACEAALGLSLLVVVSNTYGIDYVQNLNLLQCMLKIIIPTIMLIPLTWLSKSNMVWINSTIYSLVISMVCL-PLMNQFCDNSLNLS-MLFFSDSLSTPLLMLTTWLLPLMIIASQYHMNKESLARKKLYITMMILLQIFLIMTFSATELIMFYILFEATLVPTLIIITRWGGQTERLNAGIYFLFYTLAGSLPLLVALVYTQTTLGSLNMLLIQYLAEPTV-HIW-----GDSLLWLAFMLAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITAMLNP-TINFMMYPFMMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSFMGATALMVAHGLTSSLLFCLANSNYERTHSRTMILARGLQTILPLMTAWWLLASLTNLALPPSINLIGELFVTVSMFSWSNFSIILLGINIVITALYTLYMLITTQRGKYTYHIHNIKPSYTRENTLMLLHLAPLLLLMIKPKIILGTMY------MNLFSTL-MLLSLIILVLPLTLA---PNKMSNH-YSYPEYVKTM-IFYSFMTSMPPTIMFIQSGQEMVISNWHWMTIQTMELSISFKLDFFSMVFVPVALFITWSIMEFSMWYMHTDPNINRFFKYLLMFLITMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILSMAWFMANSNSWELQQIFMMNLD-NTTLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPIMENNKMVQSLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLFKPLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-LTAVYSTRIIFFALLGKPRFPSLILINENNPLLMNSITRLLVGSIFAGFLISNNINPSTVPQMTMPLYLKLTALVVTLMGFTMALELNYMTHKLK--YKHPSTMFKFSTMLGYFPLTMHRLNPLTSLAISQKSATMLLDLVWLENALPKLITKVQQNSSI--MVSSQKGLIKLYFLS---FLITI--TTALIMF----------NFPA---- +>Uropsilus_sp__1_FT_2014_ +----MNENLFASFITPT-MMGLPIVVLIIMFPSIMFPTPN-RLINNRVISLQQWLIQLTSKQMMSIHNIKGQTWSLMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISPTTAAITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIVATT-ITLFILFQLKISKHVYYS-SPETK-SMKSLKH-NTP-W-ETKWTKIYSP-LS-LPLQ----MFINRWLFSTNHKDIGTLYMLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFIMIFFMVMPILLGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIGGFVHWFPLFTGYTISSTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFASKREVSTVELTTTNIEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLHFHDHALMIAFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTIMPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKYFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSMILLSLGLLTNTLTMYQWWRDVVREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGFWPPAGISPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMNQALFITITLGVYFTVLQAAEYYEAPFTISDGVYGSTFFMATGFHGLHVIIGTTFLTVCLFRQLKYHFTSKHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTNLRKTHPLMKIINDSFVDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMFMETWNIGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAGVHLIFLHETGSNNPSGLVSDADKIPFHPYYTIKDILGVLILLLVLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLAIIPMLHTSKQRSMMFRPISQCLFWILVADLLVLTWIGGQPVEHPFIIIGQLASILYFLLILVLMPLTSIMENNFL---KW--------MY--------IINLLALIVPILLAVAFLTLIERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLRPLTSSISMFIIAPILALTLALMMWIPLPMPYPLINMNLGVLFMLAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFSLSNLIITQQYTWLIFSSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNVLTTILFLGAFHSPYFPELYAINFMVKTLVLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSFPIFLSGV-P-PQS--MNP-MVMWTICFTMIMGTVIVMMSSHWLMVWIGFEMNMLAVIPILMKNFNPR-SMEAATKYFLTQATASMLLMLAIIINLMYSGQW--SVMKMSNPTTSMMMTSAMIMKLGMAPFHFWVPEVTQGISLTSGMILLTWQKFAPLSILMQMAHTIDTNMMLMA-ATLSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMAAILTYNPSITMLNLLLYIMMTLTTFLLLQYNSTTTTLSL---SMLWNKTPLMSILILLTMLSLGGLPPLSGFMPKWMIINELTKNHSIMLPTLMAITALLNLYFYMRLTYSTSLTLFPTTNNMKMKW-QFENPKKIPFL-------PPLTILSTMLLPMTPMFTILWD--MN-MLITMIINVSLSSILVLIAFWLPQLNSYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAAQTNDVKTVLIMALTLIFMLALSLAYEWSQKG--LEWNE-MTLVHVNIMIAFLVSLLGLLLYRSHLMSTLLCLEGMMLSLFILSTILILNLHFTLASMAPIILLVFAACEAAVGLSLLVMVSNTYGVDYVQNLNLLQCMLKIIIPTMMLIPLTWLSNNNMIWINTTMYSLLISLLSL-SLLNYPDSNV--FS-ILLFSDPLSSPLLILTSWLLPLMLMASQNHLTNEPVTRKKLYISMLILLQIFLLMTFTATEMILFYILFEATLVPTLILITRWGNQTERLNAGYYFLFYTLIGSLPLLVALTYLQNTSGSLNIMMMQLMSPHLQ-NSW-----SSMLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTILSP-QTTLMAYPFMALSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSYMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMAAWWLMASLTNLALPPTINLIGELIIMLTSFSWSNLTMILMGLNMVVTALYSLYMLIQTQRGKHTHHVNNIHPSFTREHALMALHIFPLLLLSLNPKIILGMTY------MNLFSSS-LLMMLSILTLPVVAS---MTNTYKK-SSFPLYVKDT-IACAFMISMIPYIMFSYSGQETVISNWHWMTINTMKLSISLKFDYFSLIFMPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLMFLITMLILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFVLSMAWFMFNSNSWELQQIFMNTTE-QTNMPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNKTIQTLILCLGAITTLFTALCALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKTMPFTTTALITGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-LTAVYSTRIMFFALLEQPRFPPVILINENNPSLIKPIKRLLLGSIFAGFIISNNLVPMTIPAMTMPYYLKLTALFVTFIGFMMAIELNNMTRNLK--FSTPNNMYKFSNQLGFFPLIVHRLIPKMNLKMSQKMASMLLDLTWLENALPKTLAKIQMTYST--LVADQKGLVKLYFLS---FLISM--SLGLMIF----------NSHE---- +>Berardius_bairdii_Bairds_beaked_whale +----MNENLFTSFTVPV-VLGIPITTLIIMFPTILFPSPN-RLINNRVISLQQWLTKLTSKQLMNTHSPKGQTWSLMLISLLLFIASTNLLGMLPHSFTPTTQLSMNIGMAVPLWAGTVITGFRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGKTTLVLMS-INLPMAFITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLLAILSML-LALFTLLQLKISKHLYCP-DPKTV-VTKTQKQ-QTP-W-NITWTKIYLP-LS-LSQ-----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRTELGQPGTLIGDDQLYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGSPDMAFPRMNNMSFWLLPPSFLLLMASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGASSILGAINFITTIINMKPPAMTQYQMPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNSTWAKIHFVIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLISTNLEWLNGCPPPYHTFEEPAFVNP-KWP------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTNTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMTPTSDLKPGELRLLEVDNRMVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQWSEICGSNHSFMPIVLELVPLENFEKWSTSML----------MAHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSILLLILGLLTITLTVSQWWRDVIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEIPLLNTSVLLASGVSITWAHHSLMEGSRKHMLQALFITIMLGIYFTLLQASEYHEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQMKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKTINNAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLYAHVGRSLYYGSYTFQETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIILTLAAVHLLFLHETGSNNPTGIPSNMDKIPFHPYYTIKDILGALLLILALLTLTLFAPDLLGEPDNYTPANPLSTPTHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILLFIPLLHTSKQRSMMFRPFSQFFFWLLIADFLTLTWIGSQPVEYPYMTVGQLASILYFLLILVLMPMAGLIENKLL---KW--------MF--------MINILTLMLPTLLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPILALTLALTMWCPLPMPYPLINMNLGVLFMLAMSSLTVHSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLATTQEQLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIVMNMFTAILFLGASYDPLAPELFTTNLILKTLSLTMLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTAGI-P-PLT--MNP-PVFIIILTTLILSTTIVITSSHWLFAWIGFEMNMMTIIPIMMKNPNPR-ATEASTKYFLTQATASTLLMMAVIINLTYSGQW--TIMKLFNPTASMLMTLALAIKLGLSPFHFWVPEVTQGVPLTTGLISLTWQMLAPLLILYQISPSINLNLMLTM-SLLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILLYNPALTLLNLLIYIMMTFTMFMLFIQNSTTTTLLL---SQTWNKMPVTTTLTMLTLLSMGGLPPLSGFMPKWMIIQELTKNDTLAMPTFMAITSLLNLYFYMRLTYATALTLFPSMNNMKMKW-QFHSTKRMTLL-------PTAIVLSTMLLPLTPMLSTLL---MN-LLLTLSTNMALSLLLMTIAFWLPQLNTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLLDLEIALLLPLPWAIQTNDLNTMIIMALFLISLLAASLAYEWTQKG--LEWAK-MSLIYMNVMMAFTMSLTGLLMYRSHLMSALLCMEGMMLSLFILAALTILNSHFTLANMAPIILLVFAACEAAIGLALLVMISNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKSNFIWINSTIHSLLISFTSF-LLLNQSNDNSLNYS-PTFFSDSLSTPLLMLTMWLLPLMLMASQFHLLKEPLTRKKLYITMLIVLQTLLIMTFTAMELILFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALTYLQNTMGTLNFLLLQHWAQPLS-SSW-----SNTLMWLACMMAFLAKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITPLLNP-LTEHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQISLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNPTIILMGTNILITALYSLYMLIMTQHGKHTHHINNLTPSFTREHALMALHIMPLLLLSLNPKIILGPLY------MGLFTSS-ALLTLLILTSPILMS---TTNLYKS-NKYQHYVKNT-ILCAFIISLIPATMHLHTNQEVLISNWHWITIQTLKLTLSFKMDYFSLMFMPVALFVTWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLSNTNTWDLQQIFLLNKN-PLNLPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNKFIQTMTLSLGALTTLFTAFCALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKTLPFTTTALIVGSLALTGMPFLAGFYSKDPIIEAATSSYTNAWALLLTLIATS-LTAIYSTRIIFFALLGQPRFPPLININENNPLLINPIKRLLIGSIFAGFILTNNIPPMTTPLMTMPLHLKLTALMVTTLGFILAFEINLNTQYLT--HTHASNFSKFSTLLGYFPTIMHRLPPHLNLSMSQKLATSLLDLTWLETILPKTTASIQLKASM--LTSNQQGLIKLYFLS---FLITI--ILSLILL----------NYPE---- +>Orcaella_brevirostris_Irrawaddy_dolphin +----MNENLFTSFMIPI-VLGVPITTLIIMFPTMLFPTPN-RLINNRTIAIQQWLTKLTSKQLMTTHNPKGQTWSLMLTSLFLFIASTNLLGMLPHSFTPTTQLSMNLGMAIPLWAGTIFIGFRNKTKMSLAHLLPLGTPTFLIPMLVMIETISLFIQPLALAVRLTANITAGHLLLHLIGSTTLALMN-ISLL-ALITFIILTLLIILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMI-FTLFTLLQLKISKHFHLP-SPKPV-GTKLQKQ-QTP-W-NHTWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQLYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMISIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNVKWSPALMWALGFIFLFTVGGLTGIILANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWAKIQFMIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFEEPAYVNL-KYS------MAXPFQLGLQDAASPVMEELLQFHDHALMIVFLISTLVLYIITLMLTTKLTHTSTMDAQEVETIWTVLPALILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMVLPMQMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVSLENFEKWSTSML----------MAHQTHSYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSMILLLLSFLTNALTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALLITIMLGLYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFMRQVMFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKILNDAFIDLPTPSNISSWWNFGSLLGLCLITQILTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWFIRYLHANGASMFFICLYAHIGRGLYYGSYMFQETWNIGVLLLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHETGSNNPTGIPSNMDMIPFHPYHTFKDILGALLLILVLLTLTLFTPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILIFIPMLQTSKQRSMMFRPFSQLLFWTLIADLLTLTWIGGQPVEHPYIIVGQLASILYFLLILVLMPTVSLIENKLL---KW--------MF--------MINILTLTLPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFMIAPVLALTLALTMWTPLPMPHPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLNTTQEKLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGAFHDPHMPELCTTNLIAKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISLPITTASI-P-PQT--MNP-FISTTLLTTLILSTAIVTISSHWLFAWIGLEMNMMAIIPIMMKKHNPR-ATEASTKYFLTQATASSLLMLAIIINLMHSSQW--TIMKLFDPTASILMTMALAIKLGLSPFHFWVPEVTQGIPLSTGLILLTWQKLAPISVLYQISPSINLHLMITM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILLYNPTLTLLNLLIYIVMTFTMFMLLIQNSTTTTLLL---SQTWNTMPIMTTFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPTLMAITALLNLYFYMRLTYSTALTLFPSTNNMKMKW-QFYPTKQMTLL-------PTAIVLSTMLLPLTPMLFILL---MN-FLLTLLTNTTLALLLMLIAFWLPQLNIYAEKISPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQMNNLTTMLLMALFLISLLAASLAYEWTQKG--LEWDK-MSLVHINILIAFTMSLTGLLMYRSHLMSSLLCLEGMMLSLFILAALTILNTHFTLANMMPIILLVFAACEAAIGLALLVMISNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKSNFIWINTTAHSLLISFTSL-LLLNQFNDNSLNYS-LTFFSDPLSTPLLMLTMWLLPLMLMASQSHLLKEPLARKKLYITMLIMLQTLLIMTFTAMELIMFYITFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALTYLQNTVGSLNFLLLQYWTQPLS-TSW-----SNTFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTEHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVIAAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFFPLMTTWWLLACLTNLALPPTINLIGELLVIMSTFSWSNLTIILMGVNIVITALYSLYMLIMTQRGKHTHHINNLTPISTREHTLMALHIIPLLLLSLNPKIILGLPY------MNLFISS-TLLTLLMLIAPIMAS---STDFYKN-SKYQHYVKNM-TLSAFITSLLPMMMFIHTNQEMLISNWHWITIHTFKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLHNTNAWDLQQIFTLNQN-PPILPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKFIQTTMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMTTLGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALITGCFALTGMPFLTGFYSKDPIIEAATSSYTNAWALLLTLIATS-MTAIYSTRIIFFTLLEQPRFPPLMNINETNPMLINPIKRLLIGSIFAGFILTNSMPPMNTPLMTMPLYLKLTALMVTTLGFILAFEINIYSKNLK--YPYSSDPTKFSTLLGYFPTIMHRLPPHLILTMSQKLATSLLDLTWTEMILPKTTALIQLKAST--LTSNQKGLIKLYFLS---FLITM--TLSMLLF----------NYPE---- +>Hyperoodon_ampullatus_northern_bottlenose_whale +----MNENLFASFTIPM-MLGIPIVTLIIVFPTILFPTPN-RLINNRTISLQQWLTKLTSKQLMNMHNPKGQTWSLMLISLLLFIASTNLLGMLPHSFTPTTQLSMNIGMAIPLWAGTVIMGFRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGKTTLALMN-ISLSVAFITFMILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLPVILSML-LALFTLFQLKISKHLYHS-NPK-M-ITKPQKQ-QTP-W-NITWTKIYLP-LL-QSQ-----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGMLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGSPDMAFPRMNNMSFWLLPPSFLLLMASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGASSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRDLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNSTWAKSSFVIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTSTNLEWLNGCPPPYHTFEEPAFVNP-KWS------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTNTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSTSML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSILLLTLGLLTIILTVSQWWRDIIRESTFQGHHTPMVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGIYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLLVCFLRQMKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIINNTFIDLPTPSNISSWWNFGSLLGLCLITQILTGLFLAMHYTPDTTTAFSSIAHICRDVNYGWVIRYLHANGASMFFICLYAHIGRGLYYGSYIFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFALHFILPFIILALAIVHLLFLHETGSNNPTGIPSDMDKIPFHPYYTIKDTLGALLLILVLLTLTLFAPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILLFIPLLHTSKQRSMMFRPFSQLLFWLLIADFLTLTWIGGQPVEHPYMIMGQLASMLYFLLILVLMPMASLIENKLL---KW--------MF--------MINTLMLMLPILLAVAFLTLVERKILGYMQLRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPILALTLALTMWCPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLTTTQEQLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGAFHDPYTPELYTTNLILKTLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMTAGI-P-PQT--MNP-PVSIIILSTLILSTTIVITSSHWLFAWIGFEMNMMTIIPIMMKNPNPR-ATEASTKYFLTQATASTLLMMAIIINSMYSGQW--TITKLFNPTASMLMTMALAIKLGLSPFHFWVPEVTQGIPLTTGLILLTWQKLAPLLILYQISPSINLNLMLTM-SLLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILLYNPTLTLLNLLIYITTTFTMFMLLIQNSTTTTLSL---SLTWNKMPITTTFTMLTLLSMGGLPPLSGFMPKWMIIQELTKNDTLAMPTFMAITALLNLYFYMRLTYSTALTLFPSMNNMKMKW-QFHSTKRMTLL-------PTTIVLSTMLLPLTPMLSTLL---MN-LLLTLTTNMTLALLLVIIAFWLPQLNTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLNTMLIMALFLISLLAASLAYEWTQKG--LEWAE-MSLIHMNIIMAFTLSLVGLLMYRSHLMSALLCMEGMMLSLFILATLTALNLHFTLANMMPIILLVFAACEAAIGLALLVKISNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKSNHIWINSTAYSLLISFTSL-LLLNQFNDNSLNYS-LTFFSDSLSTPLLMLTMWLLPLMLMASQSHLLKETLIRKKLYITMLIMLQTLLIMTFTATELILFYITFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALTYLQNTMGTLNFLLLQHWTQPLS-PSW-----SNTLMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITPLLNP-LTEHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNDERTHSRTMILARGLQIFLPLMATWWLLASLTNLALPPTINLIGELLVVMSTFSWSNPTIILMGTNIVITALYSLYMLIMTQRGKHTHHINNLTPSFTREHALMALHILPLLLLSLNPKIILGPLY------MNLFTSF-TLLTLLILTTPLLMS---NTNFYES-NKYQHYVKNI-TLCAFIISLVPATMYLHTNQEALISNWHWVTIQTLKLTLSFKMDYFSLTFMPVALFITWSIMEFSIWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRADANTAALQAILYNRIGDIGFLLSMAWFLSNTNTWDLQQIFMLSQN-PPNLPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNKLVQTTALSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKTLPFTTTALIVGCLALTGMPFLAGFYSKDPIIEAATSSYTNAWALLLTLIATS-LTTIYSARIIFFALLGQPRFPPLTNINENNPLLINPIKRLLIGSISAGFILTNNIPPMTTPLMTMPLHLKLTALMVTTLGFILALEINLNTQYLK--HTHTSNFSNFSTLLGYFPTIMHRLPPHLNLSMSQKLSTSLLDLTWLEIILPKITVFVQMKAST--LTSNQQGLIKLYFLS---FLITI--TLSLMLF----------NYPE---- +>Callicebus_donacophilus_Bolivian_titi +----MNQNLFTSFNIPT-ILGIPLITLIILFPTLMMTPPN-KLISNRTSSLQQWLIQLTLKQLMLNHSTKGRTWSLMLLTLITFIALNNLLGLTPYAFTPTTQLSMNIGMAIPLWTATVLMGFRFKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLLGDTALTLAS-IYFSSSMITVIVIILLITLELAVALIQAYVFTLLVSLYLHDNSMPQLDISPWPLVIMSMV-VALFYTTQLKMLNFIFCP-TPMSK-LIKMQKH-NTT-W-ELKWTKICLP-HS-TSQQF---MFMNRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRAELGQPGSLMEDDHVYNVIVTSHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSVGSFISLTAVILMIFMIWEAFSSKRKVMIVEQLSSNLEWLYGCPPPYHTFEEATYVKTLN--------MAHPAQLGLQNAASPIMEELIAFHDHALMIIFLISSLVLYIISLMLTTKLTHTSTMNAQEIEIIWTILPAIILIMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYEDLAFDSYIMPTYFLEPGEFRLLEVDNRTTLPMEADIRMLISSQDVLHSWAVPSLGVKADAIPGRLNQAMVASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWAS-------------MTHQAHAYHMVNPSPWPLTGALSAFLLTSGLIMWFHFYHSLLLMAGLLASAMTMFQWWRDVVREGTYQGHHTTPVQKGLRYGMILFIISEIFFFAGFFWAFYHSSLAPTPQTGGHWPPTGIFPLNPMEVPLLNTAVLLASGVTITWAHHSLMEADQEESAQALFMTIALGVYFTYLQMSEYSEAPFTISDGIYGSTFFMATGFHGLHVIIGTTFLITCYIRLQMDHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTITRKTHPLAKIINNSFIDLPTPSNISSWWNFGSLLGICLITQIATGLFLAMHYTPDTSTAFSSVAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYYGSFLFLKTWNVGIILLLASMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFTFHFILPFIIAALAAIHLLFLHDTGSNNPSGLVSNSDKIVFHPYYTIKDILGLIFLLLLLMSLTLFTPDLLTDPDNYTLANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAVIPMTHLSKQQSMMFRPIGQSLFWTLVATLLTLTWIGGQPVEYPFVAIGQMASIMYFLTIITLIPLSSLIENKLL---KW------------------MINLLLLIVPALIAMAFLTLTERKILGYMQFRKGPNIVGPYGVLQPIADAMKLFTKEPLLPTASTTILYVIAPTLALSIALLLWAPLPMPLPLINFNLGLLFMLAISSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAIILLSVLLMSGSFNLHSLITTQEHLWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFLATPHTLLTPELYTANFMTKTLLLTALFLWIRTAYPRFRYDQLMYLLWKKFLPLTLALCMWYISMPIFTSAV-P-PQT--MNP-PAQLVILFTILTGTMITILSSHWFLIWVGLELNMLAIVPVLAKSTNPR-STEAATKYFLVQATASMLLLMTIFMNYMFSGQW--SINPPTSQFLSTTMLIALTMKLGMAPLHFWLPEVTQGIPLIPAMIILTWQKLAPISIMFQIFPSINMNILMAI-SMMSIMIGSWGGLNQTQLRKILAYSSITHMGWMMAVLHYNPNITILSLFIYLLLTISIFMTFYLNSNTTTLSM---SHTWNKFTWTMPVMPLMMLSLGGLPPLTGFSPKWVILQEFTNNNSLAIPLTMAMLTLVNLYFYLRLTYSISVTMFPTSNNAKINW-QLKYMKPAPLL-------TPLMVSSTLLLPLTPLMLLT--------MLTLTTSIIVALLLITITFWIPQPNAYTEKHNPYECGFDPTTSAHLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNKLMLTTNMILILIIILVAGLAYEWTQKG--LDWIE-MPFMYINTMLAYSMSLLGLLIYRSHLMSSLLCLEGMMLSLFILITLMTLNMHLTLMFMMPIALLVFAACEAAVGLALLILISNLYGLDYVQNLNLLQCMLKIILPTIMLLPTVWLSNSRTMWINMMTWSLLISALAL-VPLYLPN-MLCYLS-LAFFSDPLTSPLLALTAWLLPLMILATQQHLYNNPLPRKKLYMSMLILLQISLIMTFTATELILFYILFETTLIPTLIVITRWGYQPERLNAGSYFLFYTLAGSLPLLITLLYYLTNLGSLSILTMLFTTKEMV-LSW-----TNSITWLGCMLAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGSYGMMRITPMLNP-LTEKMSYPFIILSLWGMVMTS--SICLRQADLKSLIAYSSVSHMALVILAILIQTPWSFTGAIILMIAHGLTSSLLFCLANSNYERIHSRTMMFTRGLQSLFPLLALWWLMANLTNLALPPTINLMGELFTIVASFSWSNFTIMFTGLNMLVTALYSLHMFTSTQRGPLTYSTSNSKPLFTRENTLMLMHLGPIILLTLNPKVIMGLTP-------MMFSSM-ALMTLIPLLVPIMIT---LINPRNN-PLYPHYVKLA-IMYSLFISLLATTVFIFTGQEFMISNWHWTTIQTIKLFMSFKMDFFSMVFTPVALLVTWSIVEFSMWYMSSDPNINQFLKYLLIFLVTMIILITANNLFQLFIGWEGMGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFILAMAWFFLYANSWDFQQMFIINST-PSSLPLISLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLIIRFHPLFENNLPMQTLMLALGAITTLFTAICALTQNDMKKIIAFSTSSQLG--LMMVTVGLNQPFLAFLHICTHAFFKAMLFLSAGSIIHSLNNEQDIRKMGGLFNTLPFTASSLIIGNLALMGTPFLTGFYSKDLIIETANMSYTNAWALMTTLVATS-LTAAYSIRMIFFTLTNYPRSTSLILINENNPLLTNPISRLAIGSIFAGFLISNCIPPTYHPQTTMPLYLKLAALGVTILGLLLAMELSLMSNNTK--LKTPTKTYYFSNMLGFYSTTTHRLNPHSSLTSSQNLTSMLLDMFWLEKMMPKMASMTQISIST--STSTQKGLIKLYFLS---FFIPP--TLMLLLTI----------------- +>Vulpes_lagopus_Arctic_fox +----MNENLFASFATPT-MMGLPIAVLIVMFPSILFPSPN-RLINNRLISIQQWLIQLTSKQMLMIHNQKGRTWALMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALIN-ISATTALITFTILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTMILSMT-LTLFILFQLKVSKHYYPE-NPGPK-SVKSTSK-HIP-W-EDKWTKIYSP-LS-LPPQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAMVELTTTNIEWLHGCPPPYHTFEEPTYVIQ-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLEMVPLSYFETWSALMV----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHYNSMSLLTLGLTTNMLTMYQWWRDVVREGTFQGHHTSIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLDVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFMRQLHYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIVNDSFIDLPAPSNISAWWNFGSLLGVCLILQIVTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYVFMETWNVGIILLFATMATAFMGYVLPWGQMSLWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPSGITSDSDKIPFHPYYTIKDILGILLLLSVLMSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILALIPHLHTSKQRGMMFRPLSQCLFWLLTADLLTLTWIGGQPVEHPFIIIGQIASILYFAILLILMPTISIIENNLL---KW--------MF--------FVNIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSMSMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEHMWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHNPFLPELYSINFTIKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVALPIITASI-P-PQT--MKP-PILITILTTVMAGTMIVLLSSHWLLIWIGFEMNMLAVIPILMKKFNPR-AMEASTKYFLTQATASMLLMMGVTINLLYSGQW--AISKISNPAASTMMTIALTMKLGLSPFHFWVPEVTQGISLLSGMILLTWQKIAPMSVLYQISPSINTNLMMLM-ALTSVLIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIIIYSPTMMFLNLSLYIFMTLSTFMLFMLSTSTTTLSL---SHTWNKVPLIASTILTLMLSLGGLPPLSGFIPKWMIIQELTKNDMIIIPTLMAITALLNLYFYMRLTYSTALTMFPSANNMKMKW-QFEHTKKTTLL-------PPLIIISTMLLPITPMMSILD---MN-IMLTLVTNVTLASLLVMIAFWLPQLNIYADKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLTTMLTMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYINIFLAFILSLMGMLVYRSHLMSSLLCLEGMMLSLFVMMSVTILNNHLTLASMMPIVLLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTAMLIPLTWMSKPNMIWINTTMYSLLISLISL-SYLNQPNDNTLNSS-LLFFSDSLSAPLLALTTWLLPLMLMASQFHLSKEPLIRKKLYISMLTLLQLFLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALLYIQNNMGSLNFLMIQYWIQPLP-SSW-----SNVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLNP-LTNLMAYPFMLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNITIILMGTNIIITALYSLYMLITTQRGKHTHHIKNIKPSFTRENALMTLHLLPLLLLSINPKIILGPIY------MNMFASC-MITALILLTLPIIMT---STKFYKD-KLYPYYVKTA-TSYAFMISMIPAMMFIYSGQEMVISNWHWMTIKTMKLSMSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMAMAWFLLYLNAWDLQQIFMSTND-NLNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQNLTIQTLTLCLGAVTTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSVIHSLNDEQDIRKMGGLFKALPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSNTNAWALLITLVATS-MTAAYSTRILFFALLGQPRFNPMISINENNPHLINSIKRLLLGSVFAGYIISHSITPTTVPQMTMPHHLKMTALAVTILGFILALELNLTMQGLK--LNRSSHHFKFSNLLGYYPTIMHRLTPKMSLSMSQKSASMLLDHIWLESALPKSISFFQMKSST--LISNQKGLIKLYFLS---FMITM--ALSLLIL----------NYHV---- +>Hippotragus_niger_sable_antelope +----MNENLFASFITPM-ILGLPLATLIVLFPSLLFPTSD-RLINNRLISLQQWILQLVSKQMMNIHNTKGQTWTLMLMSLILFIASTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRSKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-INTATALITFIILILLTVLEFAVAIIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYH-NPEPT-WMKMPKQ-DNP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNMTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLEYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNTLTMYQWWRDIIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNNMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIVNNAFIDLPTPPNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLKTWNIGVILLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILVLMPALHTSKQRSMMFRPISQCIFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPMAGSIENKLL---KW--------MF--------MINTLMLIIPILLAVAFLTLVERKILGYMQFRKGPNVVGPYGLLQPIADAIKLFTKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQMWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNVFTTTLFLGAFHSPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPILLSGI-P-PQT--MNP-IISIIILTTIMFGTIIVMISSHWLLIWIGFEMNTLAIIPIMMKKYNPR-ATEASTKYFLTQSTASMLLMMAVIINLMSSGQW--TVMKLFNPTASMLMTMALTMKLGMAPFHFWVPEVTQGISLHSGLILLTWQKLAPMSVLYQISPSINLNLIMTL-SILSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTTAMFTLFMANSTTTTLSL---SHTWNKAPIMTALALITLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSITKQMTLL-------PTMVVLSTMLLPLTPILSVLE---MN-LVVALLTNLTLTTLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAASLAYEWTQKG--LEWTE-MSLVHMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMLWINPTLHSLLISLTSL-LLMNQFNDNSLNFS-LIFFSDPLSMPLLILTMWLLPLMLMASQHHLSKENLTRKKLYISMLILLQLFLIMTFTATELIFFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLIALIYVQNTMGSLNFLILQYWVQPMF-NSW-----SNVFTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLILSP-MTNFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPLSYTGAIALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNATIILVGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNMFSSF-TLTTLFLLTMPIMMA---SPNTHKT-SNYPFYVKTT-ISYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLANLNTWDLQQIFMLKPN-DSNLPLMGLVLAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSVMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFSTLISINENNPFLLNSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPYYLKMTALAITILGFILALEINNMTHNLK--FNHPSNAFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLEAILPKTISSIQMKASV--MITNQKGLIKLYFLS---FLITI--LISMILL----------NFHE---- +>Hippotragus_equinus_roan_antelope +----MNENLFTSFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLTNNRLISLQQWMLQLVSKQMMNIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLTLMS-ISTMAALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMILSMF-LTLFIIFQLKISKHNFYH-NPELT-STKMSEQ-NTP-W-ETKWTKICLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLSTTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPAYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISSMLTTKLTHTSTMNAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKHFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGSRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPALHTSKQRSMMFRPISQCIFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILILMPMASTIENNLL---KW--------MF--------LINTLMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFTKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEQMWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPILLSSI-P-PQT--MNP-IIFIIILMTIMFGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINPNLIMTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLYLIIYIIMTSTMFTLFMANSTTTTLSL---AHTWNKAPIMTVLTLITLLSMGGLPPLSGFMPKWMVIQEMTKNDNIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPITKQMTLL-------PTMVVLSTMLLPLTPILSILE---MN-LMVALLTNLTLTTLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLILLLAVSLAYEWTQKG--LEWTE-MSLVHMNIMVAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNLHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTAMLMPLTWLSKNNMIWINPTLHSLLISLTSL-LLMNQFNDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQHHLSKEILTRKKLFISMLILLQLFLIMTFTAAELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIHIQNTMGSLNFLILQYWVQPMS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLILNP-MTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMVAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGEMFVVMPTFSWSNITIILMGLNMLITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNMFSSF-TLTTLLLLTMPIMMT---SFSTHKT-SNYPYYVKTT-ISYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLKPD-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTESNKSAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNNEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFTLLEQPRFSTLITISENNPLLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPYYLKMTALAVTILGFILALEINNMTRNLK--FNYPSNTFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLENILPKTISSIQMKMST--VITSQKGLIKLYFLS---FLVTI--LVSTILL----------NFHE---- +>Ochotona_collaris_collared_pika +----MNENLFSSFITPS-IMGLPIVIIIIMFPIILFPTPT-RLINNRLITIQQWLVQLILKQMMLIHNPKGRTWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLALTS-ISPPTATITFIILLLLTGLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSML-VSLFSLIQLKFHKYTFPT-NPSPT-GLKTTKQ-ITP-W-ETKWTKIYSP-LS-LPHQL---MFINRWLFSTNHKDIGTLYMLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGVGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGVISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDPVWAKIHFAVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNMVSSMGSFISLTAVMIMIFMIWEAFASKREVSTVELTTTNLEWLHGCPPPYHTFEEPAYVKA----------MAYPSQMGFQDASSPIMEELMHFHDHTLMIVFLISTLVLYIIALMLSTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMVPTSDLKPGELRLLEVDNRVVLPMEMPVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKHFEAWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLVMWFHFHSLLLLSIGLLTNTLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPVGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMQQALLITILLGAYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCLLRQFNYHFTSNHHFGFEAAAWYWHFVDVIWLFLYVSIYWWGS--MTNMRKNHPLMKIINHSFIDLPTPSNISTWWNFGSLLGLCLGIQIITGLFLAMHYTSDTLTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGIYYGSYTYSETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFILPFIIAALVMVHLLFLHETGSNNPTGIIPDADKIPFHPYYTIKDALGFLLLISLLLTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSIAILAIMPLLHTSKQRSMMFRPISQTLFWILVADLLTLTWIGGQPVEHPFTIIGQLASFLYFFLILVLMPACSLIENKLL---KW--------MF--------LANIILLILPVLLAMAFLTLVERKILGYMQLRKGPNVVGPYGLLQPFADAVKLFVKEPLRPLTSSPFLFTIAPTLALTLALTMWIPIPMPYPLINMNMGILFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLCILLMNGSFTLSSLIDTQEYMWILIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYTNIIMMNALTVTLFLGAYHDTHNPQLFTINFAIKTLLLTMVFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPVFLASI-P-PYA--MNP-LVLTLITFTLMSGTAIATLSSHWLLIWVGLEMNMLSIIPMLTYKSNPR-STEAATKYFLTQATASMILMMAIILNLMYSGHW--TVLNSNNHIPPLLMMTALTMKLGMAPFHFWVPEVTQGVNLKSALLLLTWQKIAPLCILYQIHNSLNTTLLTLM-GLLSIMIGGWGGLNQTQLRKILAYSSIAHMGWMGVILTYNPDIMLLNLIIYIILTIPMFMLLIINSSTTALSL---AQTWNKNPLMTATMLTILMSLGGLPPLTGFMPKWAIINELTKNDSIILPTLMAMLALLNLYFYMRLIYSTSLTMFPTTNNMKMKW-QFEFKNQAYFL-------SPLVILSTLSLPLLPLFTTWY---MN-LILALFINTLIPMILITIAFWLPQTYAYSEKASPYECGFDPMGSARLPFSLKFFLVAITFLLFDLEIALLLPLPWAAQTNNLLLMLIIALLLISVLAMGLAYEWMQKG--LEWVE-MSITTLNIMVAFTMALLGMFTYRSHLMSSLLCLEGMMLSLFMLATIVSLNMNFTISFMFPVILLVFAACEAAVGLALLVMVSNTYGMDYIHNLNLLQCMLKLIIPTTMLLPLTWWSINKMLWINTTTHSLLISLVAL-FLMYQPNVHNLNFS-LMFSSDPLSTPLLILTFWLLPLMLIASQNHLSKESLTRKKLFISMLVLLQIFLVMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLYIHNTSGTLNFLVIQILARPLT-DSW-----SNSLLWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNP-VTEYMAYPFLLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMAAWWLLASLANLALPPSINLIGELFVIISSFSWSNLTIILAGANMLITALYTLYMLSTTQRGKLTYHINNMTPSFTREHTLILLHLLPLILLSINPKIILGITY------MNLFSTL-STLTMLILTLPIFMS---LTSFYFH-PTFPTYVKNS-VSLAFMISLVPTIMFLHTNQEMVLSNWHWTTIHSIKLSINLKLDFFSMLFTPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFVLSMAWFLIHMNSWELQQIFMLQQN-NLTLPLMGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRFYPILESNKPAQTLILCLGALTTLFTALCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTLPFTSSTLTIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLLTLIATS-MTAIYSTRVIFFALLNQPRFPPMITINENNPYLINSIKRLALGSIFAGFLISNNIPPFTAPPMTMPLYTKMAALTVTVLGFLLAMELNQLTLNLK--LSPRSKSFYFSNLLGFFPTTMHRLIPHASLLFSLNAATTTLDMTWTEKAIPKTIATIQMSMSS--LVSTQKGLIKLYSLT---FLISI--TLAILILI----------------- +>Budorcas_taxicolor_takin +----MNENLFTSFITPV-ILGLPLVTLVILFPSLLFPTSN-RLINNRLISLQQWALQLMSKQMMSTHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALLN-INTTTALITFTILALLTILEFAVAMIQAYVFTLLVSLYVHDNTMPQLDTSTWLTMILSMF-LVLFIVLQLKISKHDFYY-NPKLM-TTKTPKQ-DAP-W-ETKWTKIYLP-LS-LPL-----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNTTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMTFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYINL-K--------MAYPVQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIILLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRAVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLEYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKSLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGSCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIVNNALIDLPTPSNISSWWNFGSLLGTCLALQILTGLFLAMHYTSDTTMAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIVALTMIHLIFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGIMLLILILMSLVLFTPDLLGDPDNYTPANPLNTPSHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILTLVPFLHTSKQRSMMFRPISQCMFWLLMADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILAMMPLASTIENNLL---KW--------MF--------MLNILTLIIPILLAVAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGASHSPYMPELYAINFIIKSLLLTMTFLWIRASYPRFRYDQLMHLSWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-ITLIIILMTIMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWIPEVTQGIPLSSGLILLTWQKLAPMSVLYQVSQSINLNMILTL-SILSIMIGGWGGLNQNQLRKIMAYSSIAHMGWMTAILPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKTPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLAYSTTLTMFPSTNNMKMKW-QFSTMKRMTLL-------PTMTVLSTMLLPLTPILSILE---MN-LMITLLTNFTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMSLLLIFLLATSLAYEWTQKG--LEWTE-MSLVYMNIMMAFMVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIISTMMLMPLTWLSKNNMIWINSTLHSLLISLTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENPARKKFFISMLILLQLFLIMTFSATELILFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTMGSLNFLILQYWVQPMP-SSW-----SNTFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-ITDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYTLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFPSL-TLTTLILLTVPIMTT---SLSTHKS-TNYPLYVKTT-ISYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSTMFIPVSLFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLINLNTWDLQQIFLLKPE-NSNLPLMGLILAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLIQSTMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLALLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKTMPFTATALIIGNLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFTLLGQPRFPTLISINENNPFLINPIKRLLIGSLFAGFIISNNIPPTTIPQTTMPYYLKITALTITILGFILALEINNMTHYLK--FNYPSNMFKFSNLLGYYPTVMHRLTPYMNLTMSQKSASSLLDLTWLEIIMPKTISLTQMKTSI--MITNQKGLIKLYFLS---FLITI--LISTILL----------NFHE---- +>Rhinopithecus_strykeri_Burmese_snub-nosed_monkey +----MNENLFTPFMTPT-LLGLPAVVPIILFPTLLFPTSK-HLISNRLITTQQNLIQLIMKQMMMIHNAKGQTWSLMLMSLIIFIATTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVITGLRFKTKNSLAHFLPQGTPTPLIPMLVVIETISLFIQPMALAVRLTANITAGHLLMHLIGSAMLALLT-TSFLATLLTLVLLLLLTILEMAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFITIMTML-PALYLIMQLKLLNTNYHF-SPLQKEVSNTQVF-NNS-W-QLKWTKIYLP-HL---------MLINRWLFSTNHKDIGTLYLLFGAWAGTMGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLIASAMVEAGAGTGWTVYPPLAGNFSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQVCAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSMGSFISLVAMLLMVYMIWEAFASKRKVLLIEQPTSNLEWLHGSPPPYHTFDEPTFIKV-K--------MPHPVQLGLQDATSPIMEELIAFHDHAFMIVSLISFLVLYVLSSVLTTKLTNTNITDAQEMETIWTILPAIILILIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPSLGLKTDAIPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGALSALLMTSGLIMWFHFYSSTLLVLGLLTNTLTMYQWWRDIVRESTYQGHHTMPVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPYLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKQMIQALLITILLGVYFTLLQISEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTVCLVRQLLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTPMRKSNLIMKMINHSLIDLPTPSNISAWWNFGSLLATCLMLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNHGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNIVQWVWGGYSIDNPTLTRFFTLHFTLPFIIAAFTTLHLLFLHETGSNNPCGIPSNPDKIPFHPYYTIKDILGLTLLLLTLMVLVLFLPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLMSILILAIIPMLHKSKQQSMMFRPFSQFLLWLLITILLTLTWIGSQPVNQPFIMIGQMASMMYFTTILILMPLVSLTENNLL---K---------MF--------TVNLLLITLPIIAAMAFLTLTERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTTLYIIAPALAFSIALLLWVPLPMPNSLINLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIIMLSVLLMSGSFNLHALITTQEYIWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTMIFLGTLYPIHSPELFTVCFVTKTLLLTSMFLWIRATYPRFRYDQLMHLLWKNFLPLTLALLMWYISTPIVISGI-P-PQN--MNP-LAQLVIYSTMIMGTLVTSLSSHWFLAWAGLEMNMLAFTSILIKKANPR-STEAATKYFLMQSTASMILMMAITLNNLFPGQW--IMMNNPNQLMSLIMMMALAMKLGMTPFHFWLPEVTQGTPLIPGLLLLTWQKLAPIMIMYQIYPSINTNILMTL-STLSIMAGSWGGLNQTQLRKILAYSSITHMGWMMMTLVYNPNITVFYLLMYIIMTSTAFMALNLSSDTTTLML---SRAWNKLTWLMPLMSITLLSMGGLPPLTGFLPKWITIQELTKNNNFIMPSVMVIMTLLNLYFYLRLIYTTSMTLLPTSNNTKMKW-QFENTKPMPLM-------PPLIILTTLLLPMSPTILTMF---MN-LVLALTINTLLTLLLMIIMFWLPQLNPYAEKINPYECGFDPLNSARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTSLPMMFKSSIMLIIILTLSLAYEWTQKG--LEWIE-MPIIYMNIMLAFIISLLGMLIYRSHLMSSLLCLEGMMLSLFIMNTLMALNMHFPLANIMPIALLVFAACEAAVGLALLISISNTYGLDYIHNLNLLQCMLKMVLPTMMLLPTTWFSKNNLIWINLTTHSLIISLIPI-LFFHQTNNNLISYS-TYLSSDPLTTPLLMLTAWLLPLMIMASQYHLHNESPLRKKLYLSMMIFLQISLIMTFMATELILFYILFETTLIPTLIIITRWGNQAERLNASTYFLFYTLAGSLPLLIMLLFVHNNLGSLNIPLLTLTAQKLM-TTW-----SHNLTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIMASLIQTPWSFTGAIILMIAHGLTSSMLFCLANSNYERTHSRIMLLSRGLQTLLPLMAFWWFAANLTNLALPPTINLIGELLVMMTSFSWSHVTIMLTGLNMLITALYSLYMLVTTQRGTLTSHIINMKPSFTRENMLMFMHMSPIILLSLNPSIIMGFTT------MMMHTSI-VMLTLTSLIFPIIIT---LIKPNKN-YMYPNYVKTI-MMTTFIISLFPMTLYVLLDQDTIISNWHWMTIQSLEIMLSFKLDYFSMMFTPIALFITWCIMEFSVWYMSSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAAIQAILYNRIGDIGLILAMTWFFLHYNSWDFQQMFILDSS-PNLLPLMGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPMMENNMLIQSLTLCLGAVTTMFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLTIGSLALAGMPFLTGFYSKDLIIETANTSYTNAWALSITLIATS-LTSAYSTRTIILTLTGQPRFPTSTYINENNPALLNPMKRLTVGSLLAGFLIVNNVSPTTLPQLTMPYYLKLLALSVTTLGFLMALDLTLMTNNLK--MNTPSHVFKFSNMLGYFPTTIHRMIPCQNLIMSQNLAFILLDSIWLEKSMPKTISHTHTTTSI--TTTTQKGMIKLYFLS---FLIPL--TLIPFLMA----------------- +>Rhinopithecus_bieti_2_RL_2012_ +----MNENLFTPFMTPT-LLGLPAVVPIILFPTLLFPTSK-HLISNRLITTQQNLIQLIMKQMMMIHNAKGQTWSLMLMSLIIFIATTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVITGLRFKTKNSLAHFLPQGTPTPLIPMLVVIETISLFIQPMALAVRLTANITAGHLLMHLIGSATLALLT-TSFLATLLTLVLLLLLTILEMAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFITIMTML-PALYLIMQLKLLNTNYHF-SPLQKEVSNTQVF-NNS-W-QLKWTKIYLP-HL---------MLINRWLFSTNHKDIGTLYLLFGAWAGTMGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLIASAMVEAGAGTGWTVYPPLAGNFSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQVCAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSMGSFISLVAMLLMVYMIWEAFASKRKVLLIEQPTSNLEWLHGSPPPYHTFDEPTFIKV-K--------MPHPVQLGLQDATSPIMEELIAFHDHAFMIVSLISFLVLYVLSSVLTTKLTNTNITDAQEMETIWTILPAIILILIALPSLRILYLTDEVNNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPSLGLKTDAIPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGALSALLMTSGLIMWFHFYSSTLLVLGLLTNTLTMYQWWRDIVRESTYQGHHTMPVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPYLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKQMIQALLITILLGVYFTLLQISEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTVCLVRQLLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTPMRKSNLIMKMINHSLVDLPTPSNISAWWNFGSLLATCLMLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNHGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNIVQWVWGGYSIDNPTLTRFFTLHFTLPFIIAAFTTLHLLFLHETGSNNPCGIPSNPDKIPFHPYYTIKDILGLTLLLLALMVLVLFSPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLMSILILAMIPMLHKSKQQSMMFRPFSQFLLWLLITILLTLTWIGSQPVNQPFIMIGQMASMMYFTTILILMPLVSLTENNLL---K---------MF--------TVNLLLITLPIIAAMAFLTLTERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTTLYIIAPALAFSIALLLWVPLPMPNSLINLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLTIIMLSVLLMSGSFNLHALITTQEYIWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTMIFLGTLYPIHSPELFTVCFVTKTLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLALLMWYISTPIVISGI-P-PQN--MNP-LAQLVIYSTMIMGTLVTSLSSHWFLAWAGLEMNMLAFTSILIKKANPR-STEAATKYFLMQSTASMILMMAITLNNLFPGQW--IMMNNPNQLMSLIMMMALAMKLGMTPFHFWLPEVTQGTPLIPGLLLLTWQKLAPIMIMYQIYPSINTNILMTL-STLSIMAGSWGGLNQTQLRKILAYSSITHMGWMMMTLVYNPNITVFYLLMYIIMTSTAFMALNLSSNTTTLML---SRAWNKLTWLMPLMSITLLSMGGLPPLTGFLPKWITIQELTKNNNFIMPSVMVIMTLLNLYFYLRLIYTTSMTLLPTSNNTKMKW-QFENTKPMPLM-------PPLIILTTLLLPMSPTILTMF---MN-LVLALTINTLLTLLLMIIMFWLPQLNPYAEKINPYECGFDPLNSARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTSLPMMFKSSIMLIIILTLSLAYEWTQKG--LEWIE-MPIIYMNIMLAFIISLLGMLIYRSHLMSSLLCLEGMMLSLFIMNTLMALNMHFPLANIMPIALLVFAACEAAVGLALLISISNTYGLDYIHNLNLLQCMLKMVLPTMMLLPTTWFSKNNLIWINLTTHSLIISLIPI-LFFHQTNNNLISYS-TYLSSDPLTTPLLMLTAWLLPLMIMASQYHLHNESPLRKKLYLSMMISLQISLIMTFMATELILFYILFETTLIPTLIIITRWGNQAERLNASTYFLFYTLAGSLPLLIMLLFVHNNLGSLNIPLLTLTAQKLM-TTW-----SHNLTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIMASLIQTPWSFTGAIILMIAHGLTSSMLFCLANSNYERTHSRIMLLSRGLQTLLPLMAFWWFTANLTNLALPPTINLIGELLVMMTSFSWSHVTIMLTGLNMLITALYSLYMLVTTQRGTLTSHIINMKPSFTRENMLMFMHMSPIILLSLNPSIIMGFTT------MMMHTSI-VMLTLTSLIFPIIIT---LIKPNKN-YMYPNYVKTI-MMTTFIISLFPMTLYVLLDQDTIISNWHWMTIQSLEIMLSFKLDYFSMMFTPIALFITWCIMEFSVWYMSSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAAIQAILYNRIGDIGLILAMTWFFLHYNSWDFQQMFILDSS-PNLLPLMGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPMMENNMLIQSLTLCLGAVTTMFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFICSGSIIHNLDNEQDIRKMGGLFKTMPLTSTSLTIGSLALAGMPFLTGFYSKDLIIETANTSYTNAWALSITLIATS-LTSAYSTRTIILTLTGQPRFSTSTYINENNPALLNPMKRLTVGSLLAGFLIVNNVSPTTLPQLTMPYYLKLLALSVTTLGFLMALDLTLMTNNLK--MNTPSHVFKFSNMLGYFPTTIHRMIPCQNLIMSQNLAFILLDSIWLEKSMPKTISHTHITTSI--TTTTQKGMIKLYFLS---FLIPL--TLIPFLMA----------------- +>Chiropotes_israelita_ +----MNQNLFASFNIPV-ILGIPMVTLVILFPVMLLMPSN-NLINNRLYSLQQWLIQLTLKQMMITHTTKGRTWSLMLLTLITFIALNNLLGLTPYAFTPTTQLSMNLGMAIPLWTATVLVGLRFKTKSSLAHLLPQGTPTPLIPILIIIETISLFIQPVALAVRLTANITAGHLLMHLLGSTSLTLLS-IYLSSSLVTIIVIILLITLELGVALIQAYVFTLLVSLYLHNNTMPQLEISSWPMVILSMV-VALFYFIQMKMLNFTFHI-NPPLN-SMKNHKH-KMT-W-QLKWTKIYSP-LS-TSPSS---MFMNRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRAELGQPGSLMEDDHVYNVIVTSHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDETYAKIHFATMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIISSVGSFISLAAVILMIFMIWEAFSSKRKVLTVEQPHTNLEWLYGCPPPYHTFEEATYVKSLSEKG-----MAHPAQLGLQNAASPIMEELIAFHDHALMIIFLISSLVLYTISLMLTTKLTHTSTMNAQEIEMIWTILPAIILVMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYEDLAFDSYIVPTYFLEPGEFRLLEVDNRTTLPMEADIRMLISSQDVLHSWAVPSLGIKADAIPGRLNQAMVASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWASYLYIV--------MTHQSHAYHMVNPSPWPLTGALSAFLLTSGLIMWFHFYHTLLLYAGLLASAMTMFQWWRDIVREGTYQGHHTPPVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPQTGGHWPPTGIFPLNPMEVPLLNTAVLLASGVTITWAHHSLMESDQEESAQALSLTIALGAYFTYLQMSEYSEASFTISDGIYGSTFFMATGFHGLHVIIGTTFLITCYFRLQMDHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MSATRKTHPLMKIVNTSFIDLPTPPNISSWWNFGSLLGICLIIQIITGLFLAMHYTSDSSTAFSSVAHITRDVNYGWMVRYLHANGASLFFMCLFLHIGRGLYYGSFLFLNTWNIGIILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPDLVQWIWGGFSVDKATLTRFFTFHFILPFIIAALASIHLLFLHDTGSNNPSGLTSDPDKVSFHPYYTIKDILGSIFLLLLLMSLTLFTPDLLTDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLMHLSKQQSMAFRPISQSLFWALVADLFTLTWIGGQPVEHPFINIGQTASTLYFLII-TTIPLLTPIENKLL---KW--------MP--------MINLLLLIIPILIAMAFLTLMERKILGYMQLRKGPNIVGPYGLLQPIADAMKLFTKESLLPTTSTITLYVMAPALALSIALLLWTPLPMPYPLVNLNLGLLFMLAMSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLHSLITTQEHSWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFLATPHTPTMPELYSIHFMTKTLMLTALFLWIRTAYPRLRYDQLMHLLWKKFLPLTLALCMWYISMPTLTASI-P-PQT--MNP-LAHLIISLTILMGTMLAVLSSHWFLIWMGLELNMLSIIPMLAKNMNPR-STEAATKYFLIQATASMILLMAIILNNLLYGQW--TINPSLNQILSTMMLVAITMKLGMAPLHFWLPEVVQGIPLIPAMLILTWQKLAPMSIVIQISPSINTNIILTI-SILSIMIGSWGGLNQTQLRKILAYSSITHMGWMTAILYYNPNITILSLLIYLLLTISTFMIFYLNSNVTTLSM---SHTWNKLTWMMPTITLIMLSLGGLPPLTGFSPKWAIMQELTKNNNLIIPLIMAMLTLMNLYFYMRLTYSISMTMFPTSNSTKINW-QLKYMKSSPLL-------PPLMVSSLSLLPLTPLMLVS----MN-LALTLITNILLAMLLTTIAFWLPQLNTYTEKYNPYECGFDPTTSAHLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNLMLTINMVLTLIIILVAGLAYEWTQKG--LDWIE-MHFIYINTALAYFMSLLGLLIYRSHLMSSLLCLEGMMLSLFIMTTLMVLNLHSTLMFITPIALLVFAACEAAVGLALLVLISNLYGLDYVQNLNLLQCMLKIILPMMMLLPMMWLSKNYMAWINMMTWSLLISALTL-LPLYLPN-NLHYLS-SVFFLDSLASPLLVLTAWLLPLMVLATQQHLYNNPPPRKKLYISMLIFLQTSLIMTFTATELILFYVLFETTLIPTLIIITRWGYQPERLNAGSYFLFYTLAGSLPLLITLLYYSNNLGSLNILTTMITTKEML-LSW-----TNSATWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILNP-LTEKMNYPFLILSLWGMAMTS--AMCLRQADLKSLIAYSSVSHMALVILAILIQTPWSFTGAMVLMIAHGLTSSLLFCLANSNYERIHSRTMMFTRGLQTLFPLLALWWLLANLANLALPPTMNLVGELLTIMASFSWSNFTIMFTGLNMLITALYSLHMFTSTQRGPLTYSTSNIKPLFTRENTLMLMHVTPMFLITLNPKVIMGLML--------MHSSM-ILMTLIPLLTPIIIT---LIKPYKI-FLYPHYVKLA-IIYALIISILSTTMYVFTGQEHMISNWHWTTIQTIKLSISFKLDFFSMIFTPVALFVTWSIVEFSMWYMSSDPNINKFLKYLLIFLVTMLILVTANNLFQLFIGWEGIGIMSFLLISWWYGRADANTAALQAILYNRIGDIGLILAMTWFLLYSNSWELQQMFMLDPA-PNSLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLIIRLHPLFEKNLSVQTLMLSVGAITTLFTAICALTQNDMKKIVAFSTSSQLG--LMMVTVGINQPHLAFLHICTHAFFKAMLFLASGSIIHSLNNEQDIRKMGGLFKTMPFTSSSIIIGSLALMGMPFLTGFYSKDLIIETANTSYTNAWALMITLVATS-LTAMYSIRIIFFTLTEHPRFNNLILINENNPLLMKPINRLAMGSIFAGFLISNCTPPMTHPQVTMPQYLKLTALGITTLGLLIAMELSLMTNNMK--LNMPVKTYYFSNMLGFYSTTTHRSNPHSSLAMSQNITSILLDMFWLEKSMPKMTATTQTSIST--TTSAQKGLIKLYFLS---FLIPP--AFALLLTI----------------- +>Perameles_gunnii_eastern_barred_bandicoot +----MNENLFAPFITPT-IMGITTLPIVMFFPCLILSTPK-RWLPNRIQTLQMWLIRLITKQMMIMHNERGRSWTLMLMSLILFIASTNLLGLMPYSFTPTTQLSMNIGMALPLWMGTVLMGFRNKPKASLAHFLPQGTPTPLVPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALAS-ISITISTITFIILLLLTILEFAVAMIQAYVFTLLVSLYLHDNSMPQLDTSTWLLVIFLMI-MALFCMYQLKMLNQKLISISPQNNNITI-TKP-QLP-W-EKKWTKIYLP-HS-SPLQL---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDMWAKIHFLIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVISSIGSFISLTAVILMIFIIWEAFASKREVSSVDLTTTNIEWLYGCPPPYHTFEQPVYIKL----------MPYPAQLGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYIIIVMLTTKLTHTSTMDAQEVETIWTIMPAVILVLIALPSLRILYMMDEIFNPYLTVKAMGHQWYWSYEYTDYEDLTFDSYMIPTNELSPGQLRLLEVDNRVVLPMELPIRMLISSEDVLHAWAVPSLGLKADAVPGRLNQITLTSTRPGVYYGQCSEICGSNHSFMPIVLEMTTLKYFEKWSSMMQ----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGMIMWFHFNSSTLMLIGLTCLLLTMYQWWRDIIREGTFQGHHTPVVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLAPTPELGGCWPPVGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQMIQALSITIALGLYFTALQAMEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCLLRQFHFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKTHPLMKIINDAFIDLPTPSNISAWWNFGSLLGVCLVIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNLHANRSLNILYMLISTRGRGIYYGSYLFKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIVTAMVIVHLLFLHETGSNNPSGLNPDADKIPFHPYYTIKDALGLLLMILLLLLLAMFSPDMLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILILLVIPFLHTSKQRSLMFRPISQTLFWLLTADLFTLTWIGGQPVEQPFIIIGQVASILYFLIIIALMPLAGLLENYMLK-PKW--------MF--------IINLLLYIVPILLAVAFLTLIERKVLGYMQFRKGPNVVGPYGLLQPFADAVKLFTKEPLRPLTSSISMFIIAPILALTLALTIWVPLPMPYSLIDLNMGLLFILALSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKTLITTQENMWLIVSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIVMNAMTTILFLGTSMNHNFTHLNTLSFMMKTMTLTIVFLWIRASYPRFRYDQLMHLLWKNFLPITLACCLWFISIPIALSCI-P-PQI--MSP-YIVMIISFSLFLGTSLTLMSNHWLMAWMGLEINTLAIIPMMTYPNNMR-NTESAIKYFLMQATASMIIMFAIIYNAWMTNQW--TLLQVSNEWATTIMTLALAMKLGLAPFHFWVPEVTQGIPLTSGMILLTWQKIAPTSILYQISPSLNMNLLVLL-AVSSALLGGWGGLNQTHLRKILAYSSIAHMGWMTVIVSIDPSLTILNLLIYIAATMAMFLCLNFTSTTKINAL---SNLWNKSTPMTITMMIILLSLGGLPPLTGFMPKWLILQELIVYNNIATAMLLALSALLNLFFYMRIIYTSTLTMFPSNNTSKFQW-FYTSPKSTSLI-------PSMTIISAMLLPLSPLVINLT--MMN-LMITLIINSSLATIIVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQLPSTNTTLILSYCLILLLTAGLAYEWLQKG--LEWTE-MAPINLNLILAFSLALLGVLIYRTHLMSTLLCLEGMMLSLFILMTLLISHFHMYSMAMAPLILLVFSACEAGVGLALLVKISTSYGNDYVQNLNLLQCMLKILIPTAMLIPTTLYSNKKWVWINPTLHSLVISIASL-TMLYHYADLGWNFN-SSFSTDSLSSPLIVLSCWLLPLMMIASQNHLNKETLMRKKTYLTMLIILQLSLIMAFSSSELIMFYILFETTLIPTLIIITRWGNQNERLNAGLYFLFYTLVGSLPLLIALLYMHNKLGSLHILTMTLLSNNMN-PTL-----SNSVLWYACMVAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTVFTHP-STSTLCYPFIILSLWGMIMTS--SICLRQTDMKSLIAYSSVSHMGLVIIAALMQSTLSFMGATTLMIAHGLTSSMLFCLANTNYERIHSRILIMARGLQMILPLMCIWWLLASLANLALPPSINLLGELMVIVSSFSWSNFSIILLGINTVITAMYSLHMLITSQRGKFTHHMYPINPSFTREHLLMTLHMLPLLIIIISPKFILGPTY------MNYLINSLLMLSITTLMFPLILN---IYAPHKT-DQFPMYCKNM-IKTAFFISIPALLLFMYSGLESTITNWQWFSITSINMNMSFKLDYFSIVFIPVALYVTWSILEFSMWYMHSDPNIHRFFKYLITFLFTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWYGRTDANTAALQAVLYNRIGDIGFMLTMAWLMINNNSWDLQQIFMTNMD---TLALMGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPMTKTNPTILTTALCLGAITTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLTLLPITSSALMIGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALLMTMIATS-LTAIYSMRIIFFALLNQPRFLPISPLNENNPNLINPIMRLALGSIFAGFLLTMNIPPTSTITMTMPTTMKLSAILVTVTGLLIAMELNSLTNKLP--IPNLIHTHNFSNMLGYFTHLFHRLYPLANLYMGQHIATMLIDLNWFEKMGPKGQANMHSSLSS-FITSTQKGMIKTYFLS---FIIST--LLIMLII------------------ +>Balaenoptera_omurai_Omuras_baleen_whale +----MNENLFTPFMTPV-MLGIPITTLIIMLPSILFPTPN-RLINNRMISIQQWLTKLTSKQLMNVHSPKGQTWSLMLISLLLFIASTNLLGMLPHSFTPTTQLSMNVGMAIPLWAGAVAAGFRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGETTLALMS-TSLFTALITFTILALLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLLTISSML-LTLFVLFQLKISKHSYLP-SPKLM-STKTQKQ-QTP-W-DTAWTKIYLP-LL---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWTKIHFMIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFTSKREVLAVDLTSTNLEWLNGCPPPYHTFEEPAFVNP-KWS------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEVNNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLEIFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMFLLTLGLSTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMGGNRKHMLQALFITIALGLYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKVVNNAFVDLPTPSNISSWWNFGSLLGLCLITQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYAHMGRGLYYGSHVFRETWNIGIILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIILALTMVHLIFLHETGSNNPTGILSDMDKIPFHPYYTIKDILGALLLILALLTLTLFAPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILALVPMLHTSKQRSMMFRPFSQFLFWVLVADLLTLTWIGGQPVEHPYVIVGQLASILYFLLILVLMPLASLIENKLT---KW--------MF--------MINTLMLILPVLLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPVLALTLALTMWSPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSYTLSTLTTTQEQLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGTFHNPYNPELYTTNLTIKTLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLALALCMWHISLPIMTASI-P-PQT--MNP-SIFIILLTTLILGTMMVITSSHWLFAWIGFEMNMMAFIPIMMKNPNPR-ATEASTKYLLTQATASALLMMAIIINLLYSGQW--TITKLFNPTASTLMTTALAIKLGLAPFHFWVPEVTQGIPLSTGLILLTWQKLAPLSILYQISPSINLHLMLTM-SLLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILPYNPTLMLLNLLIYVTMTFTMFMLFIQNSTTTTLSL---SQTWNNTPIITTLTMLTLLSMGGLPPLSGFMPKWMIIHELTKNDILIMPTFMAITALLNLYFYMRLTYSTALTLFPSMNNMKMKW-QFNPTKRATLL-------PTAIVISTMLLPLTPMLSILL---MN-LLLTLLTNTALALLLMTIALWLPQLNMYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQSNNLGTMLTMALFLISLLAASLAYEWTQEG--LEWAE-MTLIHMNILMAFSMSLVGLLMYRSHLMSALLCLEGMMLSLFILAALTILNSHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQSLNLLQCMLKFIIPTIMLMPLTWLSKNSLIWINSTTHSLLVSLSSL-LLLNQLNDNSLNYS-LTFFSDSLSTPLLMLTMWLLPLMLMASQSHLIKEPPVRKKLYITMLIMLQALLIMTFTATELILFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALVYLQNTTGSLNFLLLQHWAEPLS-PSW-----SNIFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSMLNP-LTEHMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSISHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFLPLMATWWLLASLTNLALPPTINLIGELLVVMSIFSWSNPTILLMGANIVITALYTLYMLIMTQRGKHTHHINNINPSFTREHALMTLHIIPLLLLSLNPKIILGPLY------MNLFTSF-TLLTLLILFTPIMMP---YTNSHKN-NKYQLYVKNV-VFYAFITSLIPAMMYLHTNQETLISNWHWITIQTLKLTLSFKMDYFSLMFMPMALFITWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLLASMAWFLSNMNTWDLQQIFILYQN-PLNFPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNSLIQTMTLCLGATTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPFTTTALIIGCLALTGMPFLTGFYSKDPIIEATTSSYTNAWALLLTLTATS-LTAVYSTRIIFFALLGQPRFPPSMTINENNPLLINPIKRLLIGSIFAGFILFNSIPPMTTPLMTMPLHLKLTALAMTTLGFIIAFEINLDTQNLK--YTHPSNSFKFSTLLGYFPTIMHRLPPHLDLLMSQKLATSLLDLIWLETILPKTTALLQLKAST--LTSNQQGLIKLYFLS---FLITI--TLSMILF----------NSPE---- +>Cuon_alpinus_dhole +----MNENLFASFAAPS-MMGLPIAMLIVMFPSILFPSPN-RLINNRLISIQQWLIQLTSKQMLAIHNQKGRTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALIS-ISTTTAFVTFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFIMILSMF-LTLFILFQLKISKHHYPE-NPAAK-STKTTGQ-STP-W-ENKWTKIYSP-LS-LPPQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAMVELTTTNIEWLHGCPPPYHTFEEPTYVIQ-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMATRPGLYYGQCSEICGSNHSFMPIVLEMVPLSYFEAWSTLML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHYNSMSLLMLGLTTNLLTMYQWWRDVVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLYYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKAHPLAKIVNNSFIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVIRYMHANGASMFFICLFMHVGRGLYYGSYVFMETWNIGIVLLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPSGITSDSDKIPFHPYYTIKDILGVLLLLLVLMSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILAFIPFLHMSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPYIIIGQIASVLYFIILLILMPMISVIENNLL---KW--------MF--------FINIISLILPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSMSMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHMWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHSPLMPELYSINFTMKTLLLTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVALPIITASI-P-PQT--MKP-PILIIIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAVIPVLMKKYNPR-TMEASTKYFLTQATASMLLMMGVTINLLYSGQW--VVSKISNPAASIMMTIALTMKLGLSPFHFWVPEVTQGITLTSGMILLTWQKIAPMSVLYQISPSINTNLLMLV-ALVSVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIIIYNPTMMILNLVL--LHSNNTINLHIIYTKLIYHNLIFISHV--KFPLITSIILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAITALLNLYFYLRLTYSTALTMFPSANNMKMKW-QFEHTKKTILL-------PPLIITSTMLLPLTPMLSVLD---MN-MMLTLMTNVILASLLVLIAFWLPQLNIYTDKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLMTMLIMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYINIFLAFILSLMGMLVYRSHLMSSLLCLEGMMLSLFVMMSVTILNNHLTLASMMPIVLLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTIMLIPLVWMSKPSMIWINTTTYGLLISLISL-SYLSQPNDNTLTSS-LTFFSDSLSAPLLALTTWLLPLMLMASQSHLSKEPLTRKKLYISMLILLQLFLIMTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALLYIHSLMGSLNFLIIQYWIQPLP-NSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLNP-LTNFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNITVILMGVNIIITALYSLYMLITTQRGKYSHHIKNIKPSFTRENTLMTLHLLPLLLLSLNPKIILGPIY------MNMFSSC-MITALTILTLPVILT---FTKLYKN-KLYPYYVKTT-TSYAFMISTIPMMMFIYSGQETVVSNWHWMTIQTMKLSMSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMAMAWFLLNLNTWDLQQIFITTSN-NFNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNQTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLSDEQDIRKMGGLFKILPFTTTSLIIGSLALTGMPFLTGFYSKDLIIESANTSNTNAWALLITLVATS-LTAAYSTRIMFFTLLGQPRFSPVILINENNPLLINSIKRLLIGSVFAGYIISHSITPTTIPQMTMPHYLKMMALAVTLLGFILALELNLTTQGLK--FNYSSNYFKFSSLLGYYPTIMHRLTPKTGLIISQKSASTLLDSIWLENILPKSISYFQMKSSI--LVSNQKGLIKLYFLS---FMLTM--FLSLLIL----------NYHE---- +>Vulpes_zerda_fennec_fox +----MNENLFASFTTPT-MMGLPIAVLIVMFPSILFPSPN-RLINNRLISIQQWLIQLTSKQMLTIHNQKGRTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLVVIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALIN-ISATTALITFMILILLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLVMILSMI-LTLFILFQLKVSKHYYPE-SPGPK-SIKSISK-HTP-W-ENKWTKIYSP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAMVELTTTNIEWLHGCPPPYHTFEEPTYVIQ-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILVLIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLEMVPLSYFETWSAVMV----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHYNSMSLLTLGLTTNMLTMYQWWRDVVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFMRQLHYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIVNDSFIDLPAPSNISAWWNFGSLLGVCLILQIATGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYVFMETWNIGIILLFATMTTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPSGITSDSDKIPFHPYYTIKDILGVLLLLSVLMSLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILALIPHLHTSKQRGMMFRPLSQCLFWLLTADLLTLTWIGGQPVEHPFIIIGQIASILYFAILLILMPTISIIENNLL---KW--------MF--------LINIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSMSMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHMWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHNPFLPELYSINFTIKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVALPIITASI-P-PQT--MKP-PILIAILATVMTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMMGVTINLLYSGQW--MISKVSNPAASTMMTIALTMKLGLSPFHFWVPEVTQGISLSSGMILLTWQKIAPMSVLYQISPSINTDLMTLV-ALASVLIGGWGGLNQTQLRKIMAYSSIAHMGWMAAIIIYNPTMMFLNLSLYILMTLSTFMLFMLSASTTTLSL---SHTWNKIPLIASTILTLMLSLGGLPPLSGFIPKWMIIQELTKNDMIVVPTLMAITALLNLYFYMRLTYSTALTMFPSANNMKMKW-QFEHTKKMTLL-------PPLIIISTMLLPIMPMMSILD---MN-MMLTLMTNITLASLLVMIAFWLPQLNIYADKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLTTMLIMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYINIFLAFILSLMGMLVYRSHLMSSLLCLEGMMLSLFVMMSVTILNNHLTLASMMPIVLLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTAMLIPLTWTSKPNMIWINSTMYSLLISLISL-SYLNQPNDNTLNSS-LLFFSDSLSAPLLALTTWLLPLMLMASQSHLSKEPLIRKKLYISMLILLQLFLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALLYIQNSMGSLNFLMIQYWIQPLP-SSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLNP-LTDLMAYPFMLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMAAWWLLASLANLALPPTINLIGELFVVMASFSWSNITIILMGMNIIITALYTLYMLITTQRGKHTHHIKNIKPSFTRENALMTLHLLPLLLLSIDPKVVLGPIY------MNMFASC-MITALILLTLPIIMT---STKLYKD-KLYPYYVKTA-TSHAFMISMIPAMMFIYSGQEMVVSNWHWMTIQTMKLSMSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMAMAWFLLHLNAWDLQQIFMSTND-NLNLPLFGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQNTTIQTLTLCLGAVTTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSNTNAWALLITLVATS-MTAAYSTRILFFALLGQPRFTPIISINENNPYLINSIKRLLLGSVFAGYVISHSITPTTIPQMTMPHHLKMAALAVTILGFILALELNLTMQGLK--FNHSSHYFKFSNLLGYYPTIMHRLAPKTSLSMSQKSASMLLDHIWLESVLPKSIAFFQMKSST--LVSNQKGLIKLYFFS---FMITM--ALSLSIL----------NYHV---- +>Mus_cookii_Cooks_mouse +----MNENLFASFITPT-MMGLPIVVTIIMFPSILFPSSK-RLINNRLYSFQHWLIKLIIKQMMLIHTPKGRTWALMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVIMGFRHKLKSSLAHFLPQGTPITLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTIVSSL-ITLFVLFQLKISSQTFPL-PPSPK-SLTTMKV-KNP-W-ELKWTKIYLP-HS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLVMIFMIWEAFASKREVSSVSYASTNLEWLHGCPPPYHTFEEPTYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTTDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHFHSTTLLTLGLLTNILTMYQWWRDVIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGIFPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITIMLGLYFTVLQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIICLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLFKIINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGMYYGSYTFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAAMVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGVIIMFLFLMTLVLFFPDMLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQRSLMFRPITQILYWILVANLLILTWIGGQPVEHPFIIIGQLASISYFTIILILMPISGIIEDKML---KLYP------MY--------FINILTLLVPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSISLFIIAPTLSLTLALSLWVPLPMPHPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSYSLQTLITTQEHMWLIIPAWPMAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTTIIFLGPLHYINLPELYSITFMTEALLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIFLAGT-P-PYV--MNP-ITLTIIYSTIFLGPMITMSSTNLLLMWVGLEFSLLAIVPLLISKKNPR-STEATTKYFVTQATASMIILLAIVLNYKQLGTW--MFQQQTNSTILNMTLMALSMKLGLAPFHFWLPEVTQGIPLHMGLILLTWQKIAPLSILIQIYHLLDTTIILIL-AITSIFMGAWGGLNQTQMRKIMAYSSIAHMGWMLAILPYNPSLTLLNLAIYILLTIPMFMALMLNSSMTINSI---SLLWSKTPTVLTMTSLILLSLGGLPPLTGFLPKWAIITELMKNNCLIMATLMAMMALLNLFFYTRLIYSTSLTMFPTNNNSKMMN-HQPKIKSNLMF-------STLAILSTMSLPLSPQLII-----MN-LFIVIFINTMLSLALISIAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTINIPTMMTMAFILVTILSLGLMYEWMQKG--LEWTE-MTSAFFNLTLAFTLSLLGTLMFRSHLMSTLLCLEGMMLSLFIMTSMTTLNSNSMGSMPIPITILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLVWLSTPKKTWVNVTSYSFLISLISL-SLLWQTDENYKNFS-NIFSSDPLSTPLIILTTWLLPLMLMASQNHLKKENLQLQKLYISLLVSLQILLTMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALIFIQNYIGTLNFTILMLTTHTMD-ISW-----SNNLLWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGSYGMMRISIILDP-LTKYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSFMGATMLMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMAACWLMASLANLALPPSINLIGELYITISLFSWSNFSIILMGANIIITGMYSMYMIITTQRGKFTSHMINLQPSHTRESTLMILHLIPLILLTINPKLITGLTM------MNIFTSS-ILLIFIILLSPILIS---MSNLIKH-INFPLYTTMS-IKFSFIVSLIPLMFFLYNNMEYMITTWQWITMNSMKLTMSFKIDFFSILFMSVALFVTWSIMQFSSWYMHSDPHINRFIKYLTLFLITMLILTSANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMTWFSLNMNSWELQQIMFSNNN-NNLIPLIGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTSNNNTILTIMLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGMNQPYMAFLHICTHAFFKAMLFMCSGSIIHSLADEQDIRKMGNITKTMPFTSSCLIIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALLITLIATS-MTAMYSMRIIYFVTMTNPRFPPLISINETNPDLINPIKRLAFGSIFAGFLISYNIPPTNIQILTMPWFLKTTALMISVLGFLIALELNNLTMKFT--SNKKNTLSSFSTSLGYFPSIIHRIIPMESLNTSLKTSLTLLDLVWLEKSIPKSTSTIHMNMTA--LTTSQKGLIKLYFMS---FLVSM--TLIIILHTV---------NPEWSQ- +>Myotis_brandtii_Brandts_bat +----MNENLFASFITPT-MMGLPIVVLIIMFPGMLFPSTT-RLINNRLVSIQQWLIRMTTKQMMSIHNKKGQTWALMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISMTTAFITFVILVLLTVLEFAVALIQAYVFTLLVSLYLHDNAMPQLDTSTWFITIISMI-ITLFIMFQLKISKHCYYY-NPEPL-ATKSQKH-PTP-W-EMKWTKIYLP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLMFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTMSATWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMIFMVWEAFASKREVLAVELPSTNLEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLSFHDHALMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSVTIKTLGHQWYWSYEYTDYDDLMFDSYMIPTSELSPGQLRLLEVDNRVVLPAELTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICGSNHSFMPIVLEMVPLKYFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSSLLLLLGLTTNMLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFILSEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRTHMMQALLITILLGLYFTFLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIINSSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFNSVTHICRDVNYGWVLRYLHANGASMFFICLYLHVGRGLYYGSYMYTETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIIAAMVMVHLLFLHETGSNNPTGIPSNADMIPFHPYYTIKDILGLLLMITVLLMLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIIIPLLHTSKQRSMTFRPLSQCLFWLLTADLFTLTWIGGQPVEHPYVIIGQLASILYFSIIIILMPLISLMENHLL---KW--------MY--------FINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPVLFIIAPTLALTLALMMWVPLPMPHPLINMNLSMLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSILLMNGSFTLTTLITTQEYMWLMIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTIILFLGAYHSPMFSELYTINFATKALLFTMFFLWIRASYPRFRYDQLMHLLWKNFF-TSYPSNMYMTCNPADHPSKHPTPNM--MNP-LTLSLVLTTMISGTLVVMTSSHWFTTWVGFEMNMLAIIPLLTKEHNPR-STEAATKYFLTQATASMLLMMAAITNLLYTGHW--SIMKLVNPTASIMMTMALTMKLGLSPFHFWVPEVTQGVPLMSGLILLTWQKLAPLSVLYTITPLINTNILLIM-ALMSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMAVLAYNPTMTLLNLYLYIPMTITTFMLLMINSTTTTTSL---SHTWNKLPLITTLILTTMLSLGGLPPLTGFLPKWAIIQEMTKNSSIIMPTLMTLLALLNLYFYTRITYTTALTMFPTMNNMKIKW-QFKTPKQMMNL-------PLMITISTLILPLAPMMMILD---MN-FMLTLIINTLLASLLVTIAFWLPQMNVYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDKLTTMLFMSLFLISLLIISLAYEWMQKG--LEWSE-MSLTHMNILLAFITSLLGLLMYRSHLMSSLLCLEGMMLSLFVLITMTILIAHTTLASMIPIILLVFAACEAALGLSLLVVVSNTYGIDYVQNLNLLQCMLKIIIPTTMLIPLTWLSKSNMLWINSTIYSLMISMTCL-PLMNQFCDNSLNMS-LLFFSDSLSTPLLMLTTWLLPLMIIASQYHMAKEPLARKKLYITMMILLQVFLIMTFSATELIMFYILFEATLVPTLIMITRWGGQTERLNAGIYFLFYTLAGSLPLLVALIYTQTTLGSLNLLLAQYWIEPST-PVW-----SDSLLWLAYMLAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLMLSP-TANFMAYPFLMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIMAILIQSPWSFMGATALMIAHGLTSSLLFCLANSNYERTHSRTMILARGLQMILPLMAAWWLLASLTNLALPPSINLIGELFVTASMFSWSNFSIILLGINIVITALYTLYMLIMTQRGKYTYHVHNIKPSFTRENTLMSLHLTPLLLLMISPKIILGTMY------MNLFSTL-MMLSLIILTLPIM-------SATNN-HSYPQYAKTM-IFYSFMASLPPTIMFTQSGQEMMISNWYWMTIQTMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIFMLNLN-NTTLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-LTAVYSTRIIFFALLGKPRFPSLILINENNPLLTNPITRLLIGSIFAGFLISNNITPSTVPQMTMPLYIKLTALFVTLAGFAMALELSYMTQSLK--YKHPSTMFKFSTMLGYFPLTMHRLSPLTSLTMSQKSATMLLDLIWLENTLPKLISKIQQNTSV--MVSNQKGLIKLYFLS---FLITM--VLALIIF----------NFHV---- +>Sus_cebifrons_Visayan_warty_pig +----MNENLFASFIAPT-MMGLPIVTLIIMFPSLLFPTPK-RLINNRTISIQQWLIQLTSKQMMAIHNQKGQTWSLMLMSLIMFIGSTNILGLLPHSFTPTTQLSMNLGMAIPLWSATVLTGFRHKTKASLAHLLPQGTPAPLIPMLVIIETISLFIQPTALAVRLTANITAGHLLIHLIGGATLALLN-ISTMTAFITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIMSMI-MTLFILFQLKISNYSYPA-SPESI-ELKTQKH-STP-W-EMKWTKIYLP-LS-LPLR----MFVNRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQAWAKVHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSAVELTSTNLEWLHGCPPPYHTFEEPTYINL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPTLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGEMRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSTSMLTG--------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMLLLSLGLLTNTLTMYQWWRDIIRESTFQGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGDRKHMIQALSITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIINNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFIHVGRGLYYGSYMFRETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAAVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGALFMMLILLTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVASILILILMPMLHTSKQRSMMFRPLSQCLFWMLVADLIALTWIGGQPVEHPFIIIGQLASILYFLIILVLMPITSIIENNLL---KW--------MF--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADALKLFTKEPLRPATSSTSMFIMAPILALSLALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLITTQEHIWMIFTSWPLAMMWFISTLAETNRAPFDLAEGESELVSGFNVEYAAGPFAMFFMAEYANIIMMNAFTAILFLGAFHDPHTSELYTINFVLKTLALTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHISLPIMTASI-P-PQL--MNP-IIYTTLIMTVMSGTMLVMISSHWLLIWIGFEMNLLAMIPVLMKNFNPR-AMEAATKYFLTQATASMMLMMAIIINLLYSGQW--TITKMFNPVAMTMMTMALAMKLGLSPFHFWVPEVTQGISLQAGLLLLTWQKLAPLSVLCQISQSINPSLMLTM-AMLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNTTMTILNLLIYITMTLAMFMLLIHSSATTTLSL---SHTWNKMPIITSLMMVTLLSMGGLPPLSGFMPKWMIIQEMTKNESIIMPTLMAMTALLNLYFYMRLAYSSSLTMFPSTNNMKMKW-QFEHTKQMKLL-------PTMIVLSTLILPMTPALSSLN---MN-IMLTLFTNVALASLLVLIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLKTMLTMALFLLTLLAASLAYEWTQKG--LEWTE-MPLVYMNIITAFAIALAGLLMYRSHLMSSLLCLEGMMLSLFIMSTLIVLNMHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTTMLLPMTWMSKHNMIWINTTMHSLLISLV---SLLNQLSENSLNFS-LTFFSDPLSTPLLVLTTWLLPLMLMASQSHLSKETTTRKKLYITMLILLQLFLIMTFTATELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYTQNTTGSLNFLIIHYWSQPLP-NSW-----SNIFMWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTILNP-LTNYMAYPFLMLSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERVHSRTMILARGLQTLLPLMATWWLMASLTNLALPPSINLIGELFIITASFSWSNITIILMGMNMMITALYSLYMLITTQRGKYTHHINNIKPSFTRENALMALHILPLLLLTLNPKMILGPLY------MNPFTSL-TLTTLTILTIPIMMS---NSNIYKT-NLYPNYVKTT-VSYAFTLSLVPLLMFTHTGQEMIISNWHWMTLQTVELSLSFKMDYFSVMFIPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFVLSMAWFLSHSNAWDFQQIFMLNNE-CPNMPLIGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMETNKPVQTMTLCLGAITTLFTALCAITQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICMHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKTMPFTTTALIIGSLALTGMPYLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-LTAAYSTRIIFFALLGQPRFPPLVLINENNPLLINSIKRLLIGSIFAGFIISNNIPPMTVPNMTMPLYMKMTALIVTITGFMLALELNNTTYYLK--FKYPSQTYKFSNMLGYYPSIMHRLPTYHNLSMSQKSASSLLDLIWLETILPKTTSYIQMKMSI--MVSNQKGLIKLYFLS---FLITI--MISMMLF----------NYHE---- +>Nomascus_leucogenys_northern_white-cheeked_gibbon +----MNENLFASFAAPT-ILDLPAAVPIILFPSLLIPTSK-YLINNRLVTTQRWLIQLTLKQMMTMHNAKGRTWSLMLISLITFIATTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVATGFRLKAKNTFAHLLPQGTPTPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGAATLALST-ISLSATPIIFTVLALLTILEVAVALIQAYVFTLLVSLYLHDNTMPQLNTTVWPTIIMSML-LALFLLIQLKTLNMHYHP-PASPK-LTDTKPH-NNP-W-EHKWTKIYSL-HS-LPPQS---MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSDTKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDQTYAKIHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGSFISLTAVMLMIFMVWEAFASKRKILMIEQPSTNLEWLYGCPPPYHTFEEPVYMKP-KQK------MAHATQVGLQDATSPIMEELISFHDHALMIIFLISFLVLYALFLTLTTKLTNTNITDAQEMETIWTILPAIILVLIALPSLRILYLTDEINDPSLTIKAIGHQWYWAYEYTDYGGLVFNSYMLPPLFLEPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTVPSLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPVFTL----------MTHQSHAYHMVKPSPWPLTGALSALLLTSGLAMWFHFHTTTLLTLSMLTNALTMFQWWRDVVREGTYQGHHTMPVQKGLRYGMILFITSEIFFFAGFFWAFYHSSLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALFITILLGIYFTLLQISEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIICLIRQLLFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTPLRKTNPLMKLINHSLVDLPAPSNISMWWNLGSLLGTCLILQIITGLFLAMHYTPDASMAFSSVAHITRDVNYGWVIRYLHANGASMFFICLFLHIGRGMYYGSFLYLETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTDLVQWVWGGYSVDNATLTRFFTFHFILPFIITALVTLHLLFLHETGSNNPLGISSQPDKITFHPYYTTKDILGLFLLLLTLMSLVLFSPDLLGDPDNYIQANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMTIPMLHTAKQQSMMFRPLSQLTYWLWAANLLTLTWIGGQPVSYPFITIGQVTSVLYFITILILMPTASLIENKML---KWT-------MP--------ATNLLLLILPTLIAMAFLMLTERKILGYTQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPSTSTTTLYIIAPTLALTIALLLWTPLPMPNPLINLNLGLLFILATSSLTVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFNLSTLITTQEHIWLLLPTWPLAMMWFISTLAETNRTPFDLTEGESELVSGFNTEYAAGPFALFFMAEYMNIIMMNALTNMIFLGTTYDAHLPELYTTCFAVKTLLLTSLFLWIRTTYPRFRYDQLMYLLWKNFLPLTLALLMWHLSLSAMIASI-P-PQT--MNP-LAQPIIYSAVFAGTLIAASSSHWFLTWVGLEMNMLAFIPILTKKTNPR-STEAAIKYFLVQATASMILMMAILSNNLLSGQW--TMTSTTNQYSSLMILTALAMKLGMAPFHFWVPEVTQGTTLTSGLLLLTWQKLAPISIMYQIFPVVNTNILLTF-STLSIMVGSWGGLNQTQLRKILAYSSITHMGWMMAILPYNPNITIFNLTIYIVLTTTAFLALNLNSSTTTLLL---SRSWNKLTWLLPLIPSTLLSLGGLPPLSGFLPKWLVIEELTKNGSLVIPTIMAIITLANLYFYTRLIYSTSITLFPASNNVKMKW-QFENTKPTLLL-------PTLTVLTTLLLPIAPLMSPTP---MN-LALAMTISTLLALLLMIITFWLPQLNTYMEKSNPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNPSLTITSSLTLIIILILSLAYEWSQKG--LDWVE-MPLIYMNIMLAFTISLLGMLIYRSHLMSSLLCLEGMMLSLFIMSTLMALNTHSLLINIMPIVLLVFAACEAAVGLALLVSISNTYGLDHIHNLNLLQCMLKLIIPTIMLLPLTWLSKKHMIWINTTTHSLIISPIPL-LFLSQA-NNLFIHS-PSFSSDPLTTPLLMLTTWLLPLMIMASQHHLSNESLLRKKLYLSMLITLQVSLIMTFTATELMMFYILFETTLIPTLIIITRWGNQPERLNAGSYFLFYTLVGSLPLLIALIHTHNTLGSLNIMLLTLSSPSLA-NSW-----SNNIMWLACVMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILSP-LTKHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSFTGATVLMIAHGLTSSLLFCLANSNYERTHSRTMILSRGLQILLPLMAFWWLTASLANLALPPTINLLGELFVLMASFSWANTTIALTGLNMLITALYSLYMFITTQRGTLTHHIKNMKPSLTRENMLMFMHLFPLLLLSLNPNIITGPTP--------MYTTM-TILTLISLIPPVATA---LTNTNKK-SSYPHYVKTI-IASTFMISLLPTTMFMCTDQEAIISNWHWTAAQTLELSLSFKLDYFSMMFIPVALFVTWSIMEFSLWYMHSDPNINQFFKYLLIFLTTMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYAREEANTAAIQAILYNRIGDIGFILALAWFLFHTNSWEPQQMLLLSTS-SNFLPLAGLLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNQPIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTLPLTSTSLTIGSLALTGMPFLTGFYSKDPIIETANMSYTNAWALSMTLIATS-LTSAYSTRMILLTLTNQPRFPTLININENDPSLLNPIKRLTAGSLLAGFLIINSIPPISPSQTTVPLYLKLTALSVTLLGFLTAFDLYLLANKLK--MKNPSHTFRFSNMLGFYPSTIHRTIPYTSLLMSQNLASLLLDLAWLEKSMPKAISHHQISAST--TISSQKGMIKLYSLS---LLIPL--SLALLLIV----------------- +>Nomascus_gabriellae_Red-cheeked_gibbon +----MNENLFASFAAPT-ILGLPAAVPIILFPSLLIPTSK-YLINNRLVTAQQWLIQLTLKQMMTMHNAKGRTWSLMLISLITFIATTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVTTGFRLKAKNTFAHLLPQGTXXPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGAATLALST-ISLSATPIIFTVLALLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTTVWPTIIMSML-LALFLLIQLKTLNMHYHP-PASPK-LTNTKPH-NNP-W-EHKWTKIYSL-HS-LPPQS---MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSDTKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDQTYAKIHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGSFISLTAVMLMIFMVWEAFASKRKILMVEQPSTNLEWLYGCPPPYHTFEEPVYMKP----------MAHATQVGLQDATSPIMEELISFHDHALMIIFLISFLVLYALFLTLTTKLTNTNITDAQEMETVWTILPAIILVLIALPSLRILYLTDEINDPSLTIKAIGHQWYWAYEYTDYGGLVFNSYMLPPLFLEPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTVPSLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPVFTL----------MTHQSHAYHMVKPSPWPLTGALSALLLTSGLAMWFHFHTTTLLTLSMLTNALTMFQWWRDVVREGTYQGHHTMPVQKGLRYGMILFITSEIFFFAGFFWAFYHSSLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALFITILLGIYFTLLQISEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIICLIRQLLFHFTSKHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTPLRKTNPLMKLINHSLIDLPTPSNISMWWNLGSLLGTCLILQIVTGLFLAMHYAPDASMAFSSVAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYYGSFLYLETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTDLVQWVWGGYSVDNATLTRFFTFHFILPFIITALVALHLLFLHETGSNNPLGISSQPDKITFHPYYTTKDILGLFLLLLTLMSLVLFSPDLLGDPDNYIQANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMTIPMLHTAKQQSMMFRPLSQLTYWLWAANLLTLTWIGGQPVNYPFITIGQVTSVLYFITILILMPTASLIENKML---KWT-------MP--------TTNLLLLILPTLIAMAFLMLTERKILGYTQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPSTSTTTLYIIAPTLALTIALLLWTPLPMPNPLINLNLGLLFILATSSLTVYSILWSGWASNSNYALIGALRAVAQTISYEITLAIILLSVLLMNGSFNLSTLITTQEHIWLLLPTWPLTMMWFISTLAETNRTPFDLTEGESELVSGFNTEYAAGPFALFFMAEYMNIIMMNALTNMIFLGTTYDAHLPELYTTCFTIKTLLLTSLFLWIRTTYPRFRYDQLMYLLWKNFLPLTLALLMWHLSLSTMIASI-P-PQT--MNP-LAQPIIYSAVFAGTLIAASSSHWFLTWVGLEMNMLAFIPILTKKTNPR-STEAAIKYFLVQATASMILMMAILSNNLLSGQW--TMTNTTNQYSSLMILTALTMKLGMAPFHFWVPEVTQGTTLTSGLLLLTWQKLAPISIMYQVSPTVNTNILLTF-STLSIMVGSWGGLNQTQLRKILAYSSITHMGWMMAILPYNPNITIFNLTVYIVLTTTAFLALNLNSSTTTLLL---SRSWNKLTWLLLLIPSTLLSLGGLPPLSGFLPKWFVIEELTKNGSLVIPTIMATITLVNLYFYTRLIYSTSITLFPASNNVKMKW-QFENMKPTLLL-------PTLTVLTTLLLPIAPLMSPTL---MN-LALAMMVSTLLALLLMIITFWLPQLNTYMEKSNPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNPSLTIASSLTLIIILILSLAYEWSQKG--LDWVE-MLLIYMNIMLAFTISLLGMLIYRSHLMSSLLCLEGMMLSLFIMSTLMALNTHSLLINIMPIVLLVFAACEAAVGLALLVSISNTYGLDHIHNLNLLQCMLKLIIPTIMLLPLTWLSKKHMIWINTTTHSLIISPIPL-LFLSQA-NSLFIYS-PSFSSDPLTTPLLMLTTWLLPLMIMASQHHLSNESLLRKKLYLSMLITLQISLIMTFTATELMMFYILFETTLIPTLIIITRWGNQPERLNAGSYFLFYTLVGSLPLLIALIHTHNTLGSLNIMLLTLSSPSLT-NSW-----SNNIMWLACVMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILSP-LTKHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSFTGATVLMVAHGLTSSLLFCLANSNYERTHSRTMILSRGLQILLPLMAFWWLTASLANLALPPTINLLGELFVLMASFSWANTTITLTGLNMLITALYSLYMFITTQRGTLTHHIKNMKPSLTRENMLMFMHLFPLLLLSLNPNIITGPTP------MIMYTTM-TILTLISLIPPVATA---LTNTNKK-SSYPHYVKTI-IASTFMISLLPTTMFMCTDQEAIISNWHWTATQTLELSLSFKLDYFSMMFIPVALFVTWSIMEFSLWYMHSDPNINQFFKYLLIFLTTMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYAREEANTAAIQAILYNRIGDIGFILALAWFLFHTNSWEPQQMLLLNTS-SNFLPLAGLLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNQPIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTLPLTSTSLTIGSLALTGMPFLTGFYSKDPIIETANMSYTNAWALSMTLIATS-LTSAYSTRMILLTLTNQPRFPTLTNINENDPSLLNPIKRLTAGSLLAGFLIINSIPPISPSQTTVPLYLKLTALSVTLLGFLTAFDLYLLANKLK--MKSPSHTFRFSNMLGFYPNTIHRTVPYTSLLMSQNLASLLLDLAWLEKSMPKAISHHQISAST--TISSQKGMIKLYSLS---LLIPL--SLALLLIA----------------- +>Hoolock_hoolock_hoolock_gibbon +----MNENLFASFTTPT-ILGLPAAVPIILFPSLLIPTSK-YLINNRLITTQQWLIQLTLKQMMAMHNAKGRTWSLMLISLITFIATTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVAMGFRLKTKNTLAHLLPQGTPTPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGAATLALST-INLLTTPVTFTILTLLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTTAWPTIIMSML-LALFLLMQLKTLSTHYHP-PASPK-LMNIKPH-SNS-W-EHKWTKIYSP-HS-LPLQS---MFANRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASATVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNTKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNETYAKIHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGSFISLTAVMLMIFMIWEAFASKRKILMIEQPSTSLEWLYGCPPPYHTFEEPVYMKP-KQK------MAHAAQVGLQDATSPIMEELISFHDHALMIIFLISFLVLYALFLTLTTKLTNTNITDAQEMETVWTILPAIILVLIALPSLRILYLTDEINDPSFTIKAIGHQWYWAYEYTDYGGLIFNSYMLPPLFLEPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTVPSLGLKTDAIPGRLNQATFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPVFAL----------MTHQSHAYHMVKPSPWPLTGALSALLLTSGLAMWFHFHTTTLLTLSMLTNALTMFQWWRDVVRESTYQGHHTMPVQKGLRYGMILFITSEIFFFAGFFWAFYHSSLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALFITILLGIYFTLLQISEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICLIRQLLFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTPLRKTNPLMKLINHSLIDLPAPSNISMWWNFGSLLGTCLILQIITGLFLAMHYAPDASTAFSSVAHITRDVNYGWIIRHLHANGASMFFICLFLHIGRGLYYGSFLYLETWNIGIILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTDLVQWVWGGYSVDNATLTRFFTFHFILPFIITTLVTLHLLFLHETGSNNPLGISSQPDKITFHPYYTIKDILGLFLLLLILMSLVLFAPDLLGDPDNYIQANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAAIPTLHMAKQQSMTFRPLSQLTYWLLVTDLLTLTWIGGQPVSYPFTTIGQVASVLYFTTILILMPIASLIENKML---KWT-------MP--------TTNLLLLILPTLIAMAFLMLTERKILGYTQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTATLYTIAPTLALTIALLLWTPLPMPNPLINLNLGLLFILATSSLTVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFNLSTLITTQEHIWLLLPTWPLAMMWFVSTLAETNRTPFDLTEGESELVSGFNTEYAAGPFALFFMAEYVNIILMNALTTTIFLGTTYDAHLPELYTTCFTIKTLLLTSLFLWIRTTYPRFRYDQLMYLLWKNFLPLTLALLMWYISLSAMIASI-P-PQT--MNP-LAQPIIYSTIFAGTLIAASSSHWFLTWMGLEMNMLAFIPVLTKKMNPR-STEAAIKYFLVQATASMILMMAILSNNLLSGQW--TMTNITNQYPSLMILTALAMKLGMAPFHFWVPEVTQGTTLTSGLLLLTWQKLAPISIMYQIFPAMNVNILLTF-SILSIMVGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNITIFNLTIYIVLTTTAFLALNLNSSTTTLLL---SRSWNKLAWLLPLIPSTLLSLGGLPPLTGFLPKWLVIEELAKNGNLIIPTIMAIITLINLYFYMRLIYSTSITLFPTSNNVKMKW-QFENMKPTFLL-------PTFIILATLLLPITPLTFPAP---MN-LALALTINTLLALLLMTITFWLPQLNTYMEKTNPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTSPPLTIMSSLTLITILILSLAYEWSQKG--LDWVE-MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMNTLMASNTHSLLINIMPIVLLVFAACEAAVGLALLVSISNTYGLDHVHNLNLLQCMLKLIIPTTMLLPLTWLSKKHMIWINTTTHSLIISPIPL-LFFSQANNNLFTYS-PSFSSDPLTSPLLMLTTWLLPLMIMASQHHLSNESLLRKKLYLSMLITLQISLIMTFTATELMMFYILFETTLIPTLIIITRWGNQPERLNAGSYFLFYTLVGSLPLLIALIHTHNTLGSLNIMLLTLSSQSLT-DSW-----SNNLMWLAYMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILSP-LTKHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSFTGATVLMIAHGLTSSLLFCLANSNYERTHSRIMILSRGLQTLLPLMAFWWLAASLANLALPPTINLLGELSVLMASFSWANTTIMLTGLNMLITALYSLYMFTMTQRGTLTHHIKNMKPSLTRENMLMFMHLSPLLLLSLNPNIITGFTP--------MYTTM-TILTLTSLIPPIAAT---LVNPNEK-TSYPHYVKTI-IATTFMISLLPTMTFMCTDQEAIISNWHWTATQTLELSLSFKLDYFSMMFIPIALFVTWSIMEFSLWYMHSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYAREEANTAAIQAILYNRIGDIGFILALAWFLLHTNSWEPQQMLLLNTN-SNFLPLAGLLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLTENNQPIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTLPFTSTSLTIGSLALTGMPFLTGFYSKDLIIETANMSYTNAWALSMTLIATS-LTSAYSTRMILLTLTNQPRFPALTNINENNPTLLNPIKRLTTGSLLAGFLIINSIPPTSPSQTTIPLYLKLTALSITLLGFLAAFDLYLLTNKLK--TKNPSHMFRFSNMLGFYPNTIHRTIPHASLLMSQNLASLLLDLAWLEKSMPKAISHHQISASI--TISSQKGMIKLYSLS---LLIPL--FLALLLIM----------------- +>Dactylopsila_trivirgata_striped_possum +----MNENLFAPFVTPT-ILGITTLPIIMLFPCLILSSPK-RWLPSRIQTLQIWLIRLITKQMMTMHNKQGRSWSLMLMSLILFIASTNLLGLLPYSFTPTTQLSMNIGMAIPLWMGTVVMGFRNKPKSSLAHFLPQGTPTALIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALSS-INMTVSTITITILFLLTILELAVGMIQAYVFTLLVSLYLHDKSMPQLDTSTWSLTITLML-ISLFCIYQLKMLNQTMTSISSQEDKILY-PKP-QLP-W-EKKWTKTYLL-HS-SHLLS---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTVINMKPPALSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPGGGGDPILYQHLFWFFGHPEVYILILPGVGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNELWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNVLSSIGSFISLTAVILMVFIIWEAFAAKREVTTVELTTTNIEWLYGCPPPYHTFEQPVFVKS----------MPYPMQLGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETIWTILPAAILVLIALPSLRILYMMDEIYNPYLTVKAMGHQWYWSYEYTDYEDLAFDSYMIPTQDLNPGQLRLLEVDNRVVLPMELPIRMLISSEDVLHAWAVPSLGLKTDAIPGRLNQATLTSTRPGVYYGQCSEICGSNHSFMPIVLEMTTLKYFEKWSSMMQA---------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHYNSIMLLSIGLACMLLTMYQWWRDIVREGTFQGHHTPVVQKGLRYGMVLFIISEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQMIQALTITIFLGLYFTILQAMEYYESSFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCLLRQFKFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINLRKTHPLMKIINHSFIDLPTPSNISAWWNFGSLLGVCLIIQILTGLFLSMHYTSDTLTAFSSVVHICRDVNYGWLIRNLHANGASMFFMCLFLHVGRGIYYGSYLYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHETGSNNPSGIDPNADKIPFHPYYTIKDIMGLTIMILALLTLALFHPDVLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVIALLASILILLVMPFLHTSKQRSMMFRPISQTLFWLLTANLATLTWIGGQPVEEPYIIIGQAASITYFLIILVLMPMAGLLENHMLK-PKW--------MF--------IINLLFYIIPILLAVAFLTLVERKVLGYMQFRKGPNIVGPYGLLQPFADAVKLFTKEPLQPLTSSTPMFIIAPILALTLALTIWTPLPMPHSLLDLNLGLLFILALSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKNLITTQENMWLIISTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIMMMNAMTTILFLGSSFNHNLTHLNTLSFTIKTMALTLMFLWIRASYPRFRYDQLMYLLWKNFLPMTLALCLWFISIPIALSCI-P-PQI--MSP-YVLLIILTSLLLGTSLTMLSNHWLMAWMGLEINTLAIIPLMTYPNHPR-ATESAIKYFLTQATASMMVMFSIIHNAWMTNQW--TLSQISNHNACTLMTIALAIKLGLAPFHFWVPEVTQGIPLLSGMTLLTWQKIAPMSLLYQISPSLNMKILTTL-AILSTLLGGWGGLNQTHLRKILAYSSIAHMGWMTIIITINPTMTLLNLIIYIMATLTLFFMLNLTSITKIKSI---TNLWNKATPMAIIIFLTLLSLGGLPPLTGFLPKWLILQELVANNNAIMAIFMALSALLNLFLYMRIIYATTLTMFPTSNNSKLQW-FQTQTKPTTLI-------PTLTIISSLLLPLSPLFIILHY-MINHLIVTIIINTTLSTIIVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQLPTTKSMLILSYCLILLLTAGLTYEWTQKG--LEWTE-MTSINLNLTMAFSLALTGVLVYRSHLMSTLLCLEGMMLSLFILMALLISHSHMFSVSMAPLILLVFSACEAGVGLALLVKISTNYGNDYVQNLNLLQCMLKILIPTFMLIPLTWYSKKSWVWINPTSYSLLISTISL-PLLYHNTDLGHNYN-SSFCMDSLSSPLVVLSCWLLPLMMIASQGHMTKEPTNRKKTYLTMLIILQLSLIMAFTSSELIMFYILFETTLIPTLILITRWGNQNERLNAGLYFLFYTLVGSLPLLIALLHMHHNLGSLHILTNSIYSHPLD-SSI-----PNSILWYACMTAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITIFTEP-ITAHLHYPFIVLSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIIAALMQSILSFMGATALMVAHGLTSSMLFCLANTNYERIHSRTMILARGLQMILPLMCTWWLLASLANLALPPTINFLSELMVIVSSFSWSNMSIILLGTNTVITALYSLHMFITSQRGKLTHHLHTMKPTYTREHALMTLHLIPLLITSINPKFILGLTY------MNYLLNSIIMLSITMLTLPLIYN---LMFPNST-KHFPIYCKNT-VKTAFFTSLPALLLYINSGQESSITNWQWFSMGPLNISMSFKLDYFSMIFIPIALYVTWSILEFSLWYMHSDPYIHRFFKYLITFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWYGRTDANTAALQAVLYNRIGDIGFFLSMAWLMTNNNSWDLQHISMTNMN---TLALLGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLVRFHPMLETNTTALTITLCLGALTTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTIGLNHPHLAFLHICTHAFFKAMLFLCSGSIIHSLNNEQDIRKMGGLLMILPITSSALMTGSLALMGMPFLTGFHSKDLIIEAMNTSYTNTWALTITLIATA-MTAIYSMRIIFFALLNEPRFPSLSPINENNPNLINPIIRLGLGSIFAGFILTMNIPPTSMVTMTMPPMLKVMALTITVLGITIAMELNSLTNKSQ--AMSTIHTHHFSNMLGYFTYLFHRTYPLANLQMGQHIATMLIDLNWYEKIGPKGQANIHSSTSA-FITSTQKGLIKTYFLS---FIISI--PMIMMIN------------------ +>Cephalophus_silvicultor_yellow-backed_duiker +----MNENLFASFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWLLQLISKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYL-NPELT-SMKMSKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNATWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLLKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYAYTETWNVGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILALMILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPMASTIENNLL---KW--------MF--------MINILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLITTQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTVNFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFFIILMTVMFGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASIKYFLTQSTASMLLMLAVIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLDLILIL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTVLVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLSYSTALTMFPSTNNMKMKW-QFHTTKQMTLL-------PTMVVLSTMLLPLTPILSILE---MN-LMLALLTNLALATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLAVSLAYEWTQKG--LEWTE-MSLVFMNIMVAFTVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNSMIWINSTMHSLLISLTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQNHLSKESLTRKKLFITMLILLQLFLIMTFTATELILFYVLFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIHIQNTTGSLNFLILQYWTQPMS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLLLNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLLLLTIPIMMT---GSPTYKT-PNYPLYVKTT-ISYAFLISMIPTMMFIYTGQEAIISNWHWLTMQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRIGDIGFILAMAWFLANLNTWDLQQIFMLNPN-NSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSTMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKMMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMXLIATS-FTAIYSTRIIFFALLGQPRFPALIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPYYLKTTALAVTILGFVLALEVSNMTRNLK--FNYPSDTFKFSNLLGYYPMIMHRLTPYLNLTMSQKSASSLLDLIWLENILPKTTSLIQMKMST--MITSQKGLIKLYFLS---FLVTI--LISTILF----------NFHE---- +>Tamias_sibiricus_Siberian_chipmunk +----MNENLFASFITPT-MMGLPIVVLIIMFPNILFPSSN-RLINNRLISFQQWLIQLVLKQMMTMHNQKGRTWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATMVLTS-ISPPTAMITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFVTILSMI-IALFIMFQLKISNHLYPT-NPLFK-DTKLIEH-KSP-W-ETKWTKIYLP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLDDMWAKIHFTVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNTVSSMGSFISLTAVMIMIFMIWEAFASKREVLIVELTTTNLEWLHGCPPPYHTFEEPTYVKA----------MAYPFELGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINDPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMVPTSDLNPGELRLLEVDNRVVLPMELPVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFENWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSSTLLTLGMLTNMLTMYQWWRDVVREGTFQGHHTMIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGSCWPPIGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMVQALSITIALGLYFTLLQASEYLETSFTISDGIYGSTFFMATGFHGLHVIIGSTFLLVCLARQLNFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLIKIINHSFIDLPTPSNISAWWNFGSLLGICLIIQIITGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGLYYGSYTYFETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMIHLLFLHETGSNNPSGLISDSDKIPFHPYYTIKDILGMLLLLLFLMILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILMLFPILHTSKQRSMMFRPLSQCMFWILVADLLTLTWIGGQPVEHPFIIIGQLASILYFSIILLIMPTISLFENKLL---KW--------MF--------LMNLLLLIIPILVAMAFLTLVERKMLGYMQLRKGPNIVGPYGLLQPFADAMKLFMKEPLKPLTSSISLFIIAPSLALTLAFTMWIPIPMPQPLINMNMGMLFILATSSLAVYTILWSGWASNSKYALFGALRAVAQTISYEVTLAIILLSVLLLSGSFTLSSLITTQQFTWLLLPTWPLAMMWFISTLAETNRAPFDLAEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTIFMGALLNPLDPEMFTFSFTLKTLLLTSIFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPVIMACI-P-PLT--MNP-LTSSTIYLTLISGTLITLFSSHWLMIWVGLEMSMLAIIPILINKANPR-STEAASKYFLVQATASMILMMGSIINFMNMGQW--TLMNPFNQVSSIMFTIALSMKMGLAPFHMWVPEVTQGIPLMSGLILLTWQKIAPISIMLQISPSINPTLIMMM-ALLSIILGGWGGLNQTQLRKIMAYSSIAHMGWMMMIITFNPTLTMFNLIIYILLTFNMFILLYHDKNTTTLSL---SNLWNKSPILTSMTLIVLMSLGGLPPLTGFTPKWMIIKELVSNNNIILSTLMAMIALLNLFFYMRLVYSTSLTMFPSSNNMKMKW-QFENSNPTPFL-------PTFITLSTMTLPLMPLLLCII---MN-LIISLLMNIFIPLLLILVAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNIKLMLTMALILILILTLGLAYEWTQKG--LEWVE-MPAIIFNTFLAYTVSLLGMFIYRSHLMSSLLCLEGMMLSMFILCSLLALNFHFSLSFIIPIILLVFAACEAAVGLALLVMVSNTYGMDYVQNLNILQCMLKIILPTILLAPLTWFSKNSMIWINPSIHSLLISLMVL-MMLNQADDVGLTYS-QTFFSDTLSTPLLILTSWLLPLMIMASQKHLSKEPLMRKKLYILMLISLQSFLILTFSATELIMFYILFEATLIPTLIIITRWGSQTERLNAGTYFLFYTLVGSLPLLVALIYIQKSYGSLNFIVSMYQTSNLP-FLW-----SNNILWLACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMIRISTLLHP-ITTFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQSILPLMAMWWTLATLTNLALPPSINLIGEMFIILSTFTWSNYTIILTGMNMLITALYSLYMLISTQRGKFTYHASNIHPSFTRENMLMLLHLFPLLALSIKPTIILGQLY------MNMFPSL-IFMSLITLTFPIIMT---LTDLNKN-NKFPNYVKTS-IVLALLLCLIPTMMFINHNYEFIISNWHWMTIQTFKLSMSFKLDYFSILFMPVALFVTWSIMEFSMWYMHSDPYINQFFKYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLTNSNSWEFQQLFML--N-STFLPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLEQNKTIQTLILCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKALPFTSSSLMVGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALSITLIATS-LTAIYSTRIIFFALMGQPRFSPLIIINENNPQMINSIKRLLIGSIIAGFLLTFNIPPMNVPIMTMPLYLKITALFVTLMGFTIAMELNQLTLNLK--MTFYSNMPMFSTLLGYFPSITHRIYPYLNLTASQKLASTLLDLIWMEKTIPKLTANFHSTAST--MTSNQKGLIKLYFLS---FLISI--ILMTIIMI---------YLHE---- +>Trachypithecus_vetulus_purple-faced_leaf_monkey +----MNENLFAPFTTPS-FLGLPAVIPIILFPMLLIPTSK-DLINNRLVTIQQNLIQAVLKQMMMTQNTKGQSWSLMLMSLFIFIAMTNLLGLLPHSFTPTAQLSMNLAMAIPLWAGTVITGLRFKTKSSLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGNAALALSV-NNFLATPLILALLMALTILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFITIITML-PALYLIMQLKLLKMTYYF-APSQK-TFDVQPF-NNP-W-QLKWTKIYLP-PS-QLHHS---MLINRWLFSTNHKDIGTLYLLFGAWAGTAGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNLSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQVCAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSVGSFISLVAMLLMIYMIWEAFASKRKVLLIEQSTSNLEWLYGSPPPYHTFVEPAFIKT-K--------MAHPVQLGLQDATSPIMEELIAFHDHAFMIVALISFLVLYVLSSVLTTKLTNTNITDAQEMETIWTVLPAVILVLIALPSLRILYLTDEVNNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAIPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGALSALLMTSGLIMWFHFYSMTLLMLGLLTNMLTMYQWWRDIIRESTYQGHHTAPVQKGLRYGMVLFIISEAFLFAGFFWAFYHSSLAPTPHLGGHWPPTGIIPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKQMIQALFITILLGIYFTLLQISEYYEAPFTISDGIYGSTFFIATGFHGFHVIIGSTFLTVCFIRQLLYHFTSKHHFGFEAAAWYWHFVDVVWLLLYLSIYWWGS--MTAARKSNLIMKMINHSLIDLPAPSNISAWWNFGSLLATCLMLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWTLRYLHANGASMFFICLFLHVGRGMYYGSFLLLETWNIGIALLLMTMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGSNLVQWLWGGYSIDNPTLTRFFTLHFTLPFIIATFTILHLLFLHETGSNNPCGIPSESDKIPFHPYYTIKDILGMSLLLLILMMLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILTIMPMLHKSKQQSMMFRPLSQFLLWFLITILLTLTWIGSQPVNQPFIMIGQVASVMYFITILILMPLASLIENNLL---K---------MF--------TMNLLLITLPILAAMAFLTLTERKLLGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPSTSTTTLYIIAPALAFFIALLLWMPLPMPNSLINLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNIYTLITTQEHLWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTATIFLGTLYPIYSPELFTTCFVTKTLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLAFLMWYISVPITTSGI-P-PQN--MNP-LAQLIIYFTMTMGTFITSLSSHWFLAWAGLEMNMLAFTSVLIKKANSR-STEAATKYFLVQSTASMILMMAITYNNLFPGQW--TMMNNLNQPSALIMMMALAMKLGMAPFHFWVPEVTQGTPLIPGLLLLTWQKLAPISIMYQMYSSINTSALLAL-STLSIMAGSWGGLNQTQLRKILAYSSITHMGWMTMTLTYNPNITIFYLSMYIILTTTAFLALSLNSNTTTLML---SRTWNKLTWLMPLMSSTLLSMGGLPPLTGFLPKWITIQELTKNNNFIMPSIMVAMALLNLYFYLRLIYTTSMTLLPTSNNTKMKW-QFENTKSMPLI-------STLIILTTFLLPLSPTTLTIF---MN-LVFALTINALLTLLLMIIMFWLPQLSSYAEKANPYECGFDPLNPARIPFSMKFFLIAITFLLFDLEIALLLPLPWALQTTNIPTMAKSSIMLITILTLSLAYEWTQKG--LDWTE-MSIVYMNIMLSFAISLLGMLIYRSHLMSSLLCLEGMMLSLFIMNTLMALNMHFPLANIMPIALLVFAACEAAVGLALLISISNTYGLDHIHNLSLLQCMLKMVCPTIMLLPMTWLSKNNMIWINLTTHSLMISLIPI-LFFNQTNNNLISYS-TYLSSDPLSTPLLTLTAWLLPLMIMASQYHLHNESPLRKKLYLSMMIFLQTSLIMTFMATELILFYILFETTLIPTLIIITRWGNQAERLNASTYFLFYTLAGSLPLLIMLMYTQNSLGSLNIMLLTLTAQKLT-TTW-----SHNLAWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMIRLTSILNP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIMASLIQTSWSFTGAIILMIAHGLTSSMLFCLANSNYERTHSRIMMLSRGLQTLLPLMAFWWFMANLTNLALPPTINLIGELLTVVTSFSWSHVTIMFTGLNMLITALYSLHMFITTQRGVLTFHIISMKPSFTRENMLMFLHISPIILLSLNPNIIMGFTP--------MHTSI-VMLTLISLVFPAIMT---LIKPNKN-YLYPNYVKTT-MMYAFIISLLPTALYILLDQDTIISNWHWTTIQSLELTLSFKLDYFSMMFTPIALFVTWCIMEFSLWYMKSDPNINQFFKYLLIFLITMLILITANNLLQFFIGWEGVGIMSFLLISWWHARTDANTAAIQAILYNRIGDIGFVLAMAWFLLHYNSWDFQQMFILDSN-PNSLPLMGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPMTENNMLVQSLTLCLGAITTIFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLTIGSLALAGMPFLTGFYSKDLIIETANTSYINAWALSITLIATS-LTSAYGTRTIILTLTGQPRFSTSIYINENNPALLNPMKRLTMGSLLAGFLITNNITPTMLPPLTMPLYLKLLALCVTTLGFLMALDLTLMTNNLK--MDTPSHVFKFSNMLGYYPATVHRMIPYQNLIMSQNMAFLLLDLIWLEKSMPKTISHTHTIIST--ITTTQKGMIKLYFLS---FLISL--ILIPLLVV----------------- +>Pteronotus_parnellii_Parnells_mustached_bat +----MNENLFASFITPT-MMGLPIVVLVIMFPTILFPSTN-RLINNRLVAIQQWLIHLTSKQMLSIHNRKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLSMAIPLWAGTVILGFRHKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMD-ISMTTAFITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNAMPQLDTSTWFITIVSTL-LTLFIIMQLKVSSHHYHS-TPEPT-LTKTTKP-STP-W-ETKWTKIYSL-LS-LPLR----MFVTRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNMTWAKIHFLVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMVWEAFAAKREVSLVELTTTNLEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISSMLTTTLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPSMTIKTMGHQWYWSYEYTDYSDLCFDSYMIPTPDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLFYGQCSEICGSNHSFMPIVLEVVPLEYFEKWSASML----------MTHQAHAYHMVNPSPWPLTGALSALLLTSGLVMWFHYNSTLLLILGLITNTLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLDPLDVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQSLFITICLGLYFTFLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNESLVDLPVPSSVSSWWNFGSLLAACLAVQILTGLFLAMHYTSDTATAFNSVTHICRDVNYGWILRYLHANGASMFFICLYIHIGRGMYYGSYMYSETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFLLPFIIAALVVVHLLFLHETGSSNPTGIPSDPDMVPFHPYHTIKDILGILTMLTLLSMLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLAVIPLLHTSKQRTMMFRPISQCLFWLLIADLLTLTWIGGQPVEHPYIIIGQMASIMYFTIILILMPATSTMENHLL---KW--------MF--------LINLLSMIVPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFIIAPILALTLALTMWVPLPMPHPLINMNLSVLFMLAMSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLIITQEYMWLIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTTILFLGAYNNPIMPELYTTNFMVKTLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTMPIIMAGI-P-PQT--MNP-IIFSMIMSTIILGTLIVMTSSHWLSVWMGFEMNMLAIIPVLMKNHHPR-STEAATKYFLTQATASMLLMLAVIINLMHSGQW--STTKIFNPMASIIMTLALTMKLGLSPFHFWVPEVTQGVPLSAGLILLTWQKLAPLAVLYTIAPSINLELLTTL-SLISVMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILAYNPTMTILNLIIYILMTTTMFMLLIHTSATTTLSL---SHMWNKMPLITIMILTVLLSLGGLPPLTGFVPKWMIIQELTKNESLILPTMMAITALLNLYFYMRLTYATSLTMFPTTNNTKIKW-HFETTKRTVGL-------PPLVIISTMIIPLTPMMATLY---MN-MALTLLINTLLASLLVAIAFWLPQTNVYTEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTGNLKTMLPVALLLISILAISLAYEWFQKG--LEWSE-MSLTYMNMLLAFMISLTGLLMYRSHMMSSLLCLEGMMLSLFVMMSMTILSTHMTLASMLPIILLVFAACEAALGLSLLVMVSNTYGVDYVQNLNLLQCMLKIIVPTIMLIPLTWLSKTKLIWINTTAHSLMISLLCF-PLINQFSDNSLNFS-LMFFSDSLSTPLLMLTMWLLPLMIIASQFHLTNETPTRKKLYITMLVLLQVFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQA-RLNAGLYFLFYTLVGSLPLLVALVYIQNSTGSLNFLLIQYWAKSMS-PSW-----ANTTLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITVLLNP-MTNHMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLVQTPWSHMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTILPLMAAWWLLASLTNLALPPTINLIGELFVITSTFSWSNLSIILMGFNIILTALYSLYMLIMTQRGKHTHHINNITPSYTRENTLMAMHMLPLLLLSINPKIIMGTLY------MNMYSST-MLVSLIILTIPIMMT---ASNRHNH-PTYPNYVKTM-ISYSFMISIIPTMIFIYTGQETVVTNWNWMTIQTMKISLSFKLDFFSMLFMPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILSMAWFLTNSNTWELQQIFILNTT-STTLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNQMMQTMTLCLGAITTLFTAVCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKMMPFTTTALTVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATS-LTAVYSTRIIFFALLSQPRLPTLIVVNENNPLLMNSIKRLMVGSIFAGFLISNNIPPMTIPQMTMPPYLKLMALIVTLTGFALALELNMAALNLK--FNPPSNPTKFSTLLGYFPTIMHRLPPMTSLSISQKSASLLLDLAWLEAALPKLVAHLQLKSST--LITNQKGMIKLYFLS---FLITL--MLATTMF----------NFHG---- +>Isoodon_macrourus_northern_brown_bandicoot +----MNENLFAPFITPT-IMGITTLPIVMFFPCLILSTPK-RWLPNRIQTLQMWLIRLITKQMMVMHNERGRSWTLMLMSLILFIASTNLLGLLPYSFTPTTQLSMNIGMALPLWMGTVLMGFRNKPKASLAHFLPQGTPTPLVPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALAS-ISITISTITFIILLLLTVLELAVAMIQAYVFTLLVSLYLHDNSMPQLDTSTWLLVIFLMI-MALFCMYQLKMLNQKLISISPQNNDVII-TKP-QLP-W-EKKWTKIYLP-HS-SPLQL---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNEMWAKIHFLIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIISSIGSFISLTAVILMIFIIWEAFASKREVSSVDLTTTNIEWLYGCPPPYHTFEQPVFIKL----------MPYPAQLGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYIIIVMLTTKLTHTSTMDAQEVETIWTIMPAVILVLIALPSLRILYMMDEIFNPYLTVKAMGHQWYWSYEYTDYEDLTFDSYMIPTNELLPGQLRLLEVDNRVVLPMELPIRMLISSEDVLHAWAVPSLGLKADAVPGRLNQVTLTSTRPGVYYGQCSEICGSNHSFMPIVLEMTTLKYFEKWSSMMQS---------MTHQTHAYHMVNPSPWPLTGALSALLLTSGMIMWFHFNSTILMMIGLTCLFLTMYQWWRDIIREGTFQGHHTPVVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLAPTPELGGCWPPVGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQMIQALSITIALGLYFTILQAMEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCLLRQFYFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKTHPLMKIINDAFIDLPAPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNLHANGASMFFMCLFLHVGRGIYYGSYLFKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIVTAMVIVHLLFLHETGSNNPSGLNPDSDKIPFHPYYTIKDALGLLLMVLLLLLLAMFSPDMLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLLIIPLLHTSKQRSLMFRPISQILFWLLAADLFTLTWIGGQPVEQPFIIIGQVASILYFLLIIALMPLAGLLENYMLK-PKW--------MF--------IINLLLYIVPILLAVAFLTLIERKVLGYMQFRKGPNIVGPYGLLQPFADAVKLFTKEPLRPLTSSISMFIIAPILALTLALTIWVPLPMPYSLIDLNMGLLFILALSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKTLITTQENMWLIISTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIVMNAMTTILFLGTSINQNFTHLNTLSFMMKTLTLTIMFLWIRASYPRFRYDQLMYLLWKNFLPITLACCLWFISIPIALSCV-P-PQI--MSP-YIILIISFSLLLGTSLTLISNHWLMAWMGLEINTLAIIPMMTYPNNMR-NTESAIKYFLMQATASMIIMFAIIYNAWMTNQW--TLLQVSNEWAATLMTLALAMKLGLAPFHFWVPEVTQGIPLTSGMILLTWQKIAPTSILYQISPSLNMNLLILL-AVSSTLLGGWGGLNQTHLRKILAYSSIAHMGWMTVIVLINPSLTILNLLIYIAATLAIFLCLNLTSITKINAL---SNLWNKSTPMTITLMIILLSLGGLPPLTGFMPKWLILQELIVYNNITTAMLLALSALLNLFFYMRIIYTSTLTMFPSNNSSKFQW-FHTSPKPTSLI-------PSMTIISAMLLPLSPLVINLT---MN-LMITLIINSTLATIIVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQLPSTNTMLILSYCLILLLTAGLAYEWLQKG--LEWTE-MAPINLNLILAFSLALLGVLIYRTHLMSTLLCLEGMMLSLFILMTLLISHFHMYSMSMAPLILLVFSACEAGVGLALLVKISTSHGNDYVQNLNLLQCMLKILIPTAMLIPTTLYSNKKWVWINPTMYSLLISIASL-TMLYHYADLGWNFN-SSFSTDSLSSPLIVLSCWLLPLMMIASQNHLNKETLTRKKTYLTMLIILQLSLIMAFSSSELIMFYILFETTLIPTLIIITRWGNQNERLNAGLYFLFYTLVGSLPLLIALLYMHNKLGSLHILTMTLLSNNMH-PTL-----SNSVLWYACMVAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRLTVFTHP-STMTLCYPFIILSMWGMIMTS--SICLRQTDMKSLIAYSSVSHMGLVIIAALMQSTLSFMGATTLMIAHGLTSSMLFCLANTNYERIHSRILILARGLQMILPLMCIWWLMASLANLALPPSINLLGELMVIVSSFSWSNFSIILLGINTVITAMYSLHMLITSQRGKFTHHMYPINPSFTREHLLMTLHMLPLLIIIISPKFILGPTY---MKVINYMINSLLMLSITILAFPLILN---MYAPHKT-NQFPTYCKNA-IKTAFFISLPALLLFVYSGLESTITNWQWFSIASINMNMSFKLDHFSIIFIPIALYVTWSILEFSLWYMHSDPNIHRFFKYLITFLFTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWYGRTDANTAALQAVLYNRIGDIGFMLTMAWLMINNNSWDLQQIFMTNMN---TLALLGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPATKTNPTILTTALCLGAITTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLTLLPITSSALMIGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALLMTMVATS-LTAMYSMRIIYFALLNQPRFLPMSPLNENNPNLINPIIRLALGSIFAGFILTMNIPPTSIIPMTMPTTMKLSAIMVTILGLLIAMELNSLTNKLP--IPNLIHTHNFSNMLGYFTHLFHRLYPLANLHLGQHIATMLIDLNWFEKMGPKGQANMHSSLSS-FITSTQKGMIKTYFLS---FIISA--LLIMLII------------------ +>Pygathrix_nemaeus_Red_shanked_douc_langur +----MNENLFTSFTHPT-LLGLPAVVPIILFPTLLLPTSK-YLINNRLITIQQNLIQLIVKQMMMIHNIKGQTWSLMLMSLIIFIATTNLLGLLPHSFTPTAQLSMNLAMAIPLWAGTVITGLRFKTKSSLAHFLPQGTPTLLIPMLVVIETISLFIQPVALAVRLTANITAGHLLMHLIGSATLVLST-ISLSMTSLTLVLLVLLTILEMAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWLITIMTML-PALYLIMQLKLLNMVYYF-PPSQK-VSSTQMF-NNP-W-QLKWTKIYLP-HL-HTQHS---MLINRWLFSTNHKDIGTLYLLFGAWAGTTGMAMSLLIRAELGQPGSLLGNDHIYNVIITAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNFSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDEICAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVVSSMGSFISLVAMLLMIYMIWEAFASKRKVLFIEQPTYNLEWLHGSPPPYHTFDEPTFIKV-K--------MPHPVQLGLQDATSPIMEELIAFHDHAFMIVAMISFLVLYVLSSVLTTKLTNTNITDAQEMETIWTILPAIILILIALPSLRILYLTDEVNNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGALSALLMTSGLVMWFHFYSTTLLTLGLLTNMLTMYQWWRDIIRESTYQGHHTTPVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPHLGGHWPPTGIIPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKQMIQALSTTILLGIYFTLLQMSEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTTCLIRQLSYHFTSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MIPMRKSNPIMKLINHSLIDLPTPSNISAWWNFGSLLAICLILQIITGLFLAMHYSPSTSSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGIALLLMVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSIDNPTLTRFFTLHFTLPFIITAFTVLHLLFLHETGSNNPCGIPSNSDKIPFHPYYTIKDMLGLVLLILLLMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLMSILILMIIPMLHKSKQQSMMFRPFSQFTLWLLITVLLTLTWIGSQPVNQPFIMIGQVASMMYFTTILILMPLASMIENNLL---K---------MF--------TMNLLLIILPTMAAMAFLTLTERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTTLYIIAPALAFSIALLLWVPLPMPNSLINLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIIMLSVLLMSGSFNLHALITTQEHLWLLLPSWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTATIFLGTLYPIHSPELFTTCFVTKTLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLALLMWYISTLIMTSGI-P-PQS--MNP-LAQLVIYSTMIMGTLITSLSSHWFLAWTGLEMNMLAFTSILIKKANIR-STEAATKYFLTQATASMILMMAIMYNNLFSGQW--TLMNNPNQLSSLIMTMALAMKLGMTPFHFWVPEVTQGTPLMSGLLLLTWQKLAPISIMYQIYPSINTSILMTL-SALSIMAGSWGGLNQTQLRKILAYSSITHMGWMMMTMTYNPNITIFYLLMYIIMTSTAFLALNLNSNTTTLML---SRTWNKLTWLMPLMLLTLLSMGGLPPLTGFLPKWMTIQELTKNSNFIMPSIMITMTLLNLYFYLRLTYITSMTLLPTSNNTKMKW-QFENTKPTPLF-------PPLIIFTTLLLPMSPTVLTLF---MN-LMLTLMINTSLTILLMIIMFWLPQLNSYVEKANPYECGFDPLNSARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPVMIKSSITLIIILTLSLAYEWTQKG--LDWTE-MSIIYMNIMLAFTTSLLGMLIYRSHLMSSLLCLEGMMLSLFIMSTLTALNTHFPLANMVPIALLVFAACEAAVGLALLISISNTYGLDHIQNLNLLQCMLKMIFPTMMLLPTTWFSKNNLVWINLTTHSLMISLIPL-MFFNQINNNLISHS-TYLSSDPLTTPLLMLTAWLLPLMIMASQYHLHNESPLRKKLYLSMMIFLQISLIMTFMATELILFYILFETTLIPTLIIITRWGNQAERLNASTYFLFYTLAGSLPLLIMLIYTHNKLGSLNIPLLTLMAQKLT-TSW-----SHNLAWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTPILNP-LTEHMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIMASLIQTPWSFTGAIILMIAHGLTSSMLFCLANSNYERTHSRIMLLSRGLQSLLPLMAFWWFVANLTNLALPPSINLIGELLVVTSSFSWSHITIIFTGLNMLITALYSLHMFITTQRGTLTSHIINMKPSFTRENMLMFMHMSPIILLTLNPSIIMGFTP------MMMHTSI-FMLALTPLIFPIIIT---LISPNKN-NMYPNYVKTT-MMFTFTISLIPTTMYTFLGQDTIMSTWHWMTIQSLEITLSFKLDYYSVMFTPIALFITWCIMEFSLWYMDSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYARTDANTAAIQAILYNRIGDIGFILAMMWFLLHYNSWDLQQMFILDPN-PDLLPLVGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPPMENNTTIQSLTLCLGAITTMFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFICSGSMIHNLNNEQDIRKMGGLFKTMPLTSTSLMIGSLALTGMPFLTGYYSKDLIIETANTSYTNAWALCITLIATS-MTSAYSTRTIILTLTGSPRFSTSVYINENNPTLLNPMKRLAAGSLLAGFFIVNNISPTTVPQLTMPYHLKLLALCVTTLGFLTALDLTLMTNSLK--MNTPSHMFKFSNMLGYFTITIHRTVPYQNLTMSQNLAFLLLDLLWLEKSMPKTISHTHIITAI--TSTTQKGMIKLYFLS---FLISL--TLIPLLIM----------------- +>Rhinolophus_luctus_Woolly_horseshoe_bat +----MNENLFASFITPT-MMGLPIVILIIMFPTMLFPSTN-RLINNRLIAIQQWLIHMTSKQMMTIHNHKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALLS-ISTATAFITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITIFSMI-ITLFIMMQLKVSKHTFHS-NPEPL-EVKSSKH-STP-W-EAKWTKIYSP-LS-LPQR----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLDTTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMVFMVWEAFASKREVSTVELTTTNLEWMHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLHFHDHALMIVFLISSLVLYIISLMLTTNLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRVVLPMELTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKHFEKWSSTMV----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSTLLLTLGLLANVLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIFLGLYFTLLQASEYHETSFTIADGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLFKIINDSFVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTSDTTTAFYSVTHICRDVNYGWVLRYLHANGASMFFICLFLHVGRGIYYGSYTFSETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTTLVEWVWGGFSVDKATLTRFFALHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSDMDMIPFHPYYTIKDILGLILMLTALMSLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAAIPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPLASIVENRLL---KW--------MF--------MINLLLLIVPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFTKEPLRPLTSSISMFIIAPVLALTLALTMWTPLPMPHPLINLNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLLSGSFSLSTLITTQEFTWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNIFTVTLFLGAFHNPLMPELYTTNFMLKSLILTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVAMPVITAGI-P-PQT--MNP-LILAMILSTVALGTLIVMTSSHWLLVWIGFEMNMLAIIPMMMKRSNPR-STEASTKYFLTQATASMLLMLAIIINLFHSGQW--TVTSTLSPTASTIMTLALTMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSILYQISHSINLNILLTM-SMLSILVGGWGGLNQTQLRKILAYSSIAHMGWMTAIMAYNPTMALLNLVLYILMTTTTFTLFMANSSTTTLAL---SHSWNKTPVLTASILAIMLSLGGLPPLTGFLPKWMIIQELTKNDSIILPTMMAMTALLNLYFYMRLTYTTSLTMFPSTNNMKIKW-QFVNTKWTTYM-------APMIILSTLTLPLAPMLSTLY---MN-FMLTLLTNTFLALLLVTIAFWLPQTNVYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQASNLKTMLTTALFLISLLAISLAYEWSQKG--LEWTE-MALIYMNTLLAFTISLLGLLLYRSHLMSSLLCLEGMMLSMFVMVTVIILNTHLTTSSMMPIVLLVFAACEAALGLSLLVMVSNNYGVDYVQNLNLLQCMLKIIIPTTMLIPLVWLSKRTMIWINPTMYSLMISLLSL-PMLNQFTDNSLNIS-LVFFSDSLSTPLLMLTTWLLPLMLIASQHHLANESLNQKKLFMTMLILLQVFLIMTFTATELILFYILFEATLLPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNITGTLNFLLSTYWLQPLS-PSW-----SNAFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMLLNP-VTDFMAYPFLMLSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTILPLMAAWWLLASLTNLALPPTINLIGELFVVMATFSWSSVSIILMGTNIVITALYSLYMLITTQRGKHTYHINNLTPSFTRENTLMTMHLTPLLLLSINPKIILGTLY------MNLFTPL-MLTSLLVLTIPIIMT---TLNLHKT-NTYPHYVKTT-IVWAFTISLIPTMMFLQSGQEMILMNWHWMSIQTLKISMSFKLDYFSMIFTPVALFVTWSIMEFSLWYMHSDPYIDRFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFLMAMAWFLFNTNTWELQQIFSLNLN-NTNLPLAGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLIENNKTIQSMVLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLYKTLPFTTSALTVGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLITLIATS-LTAVYSTRIIFFALLGQPRFPTLVLINENNPYLMNSIKRLLIGSIFAGFLITNTIPTMTVPQMTMPWYLKITALLVTIMGFTIALDLSSATQNLK--FSHPSNPFKFSNLLGYFPTIMHRFMPLMNLSLSQKTASLLLDLTWMEKALPKSVSLLQMKTST--LVSNQKGQIKLYFLS---FFLTL--TLSLITL----------NLHE---- +>Notoryctes_typhlops_marsupial_mole +----MNENLFAPFITPS-IMGITTLPIIIMFPCLILSTPK-RWIPNRIQTLQMWLIRLITKQMMTMHNKLGRTWTLMLMSLILFIASTNLLGLLPYSFTPTTQLSMNIGMAIPLWMGTVLMGFRNKPKASLAHFLPQGTPTPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALSS-ISMTVSSITFMILFLLTILEFAVAMIQAYVFTLLVSLYLHDNSMPQLDTSTWLLVIFLMT-ISLFCAYQLKMKNQDMTSITALDT-RPDYPKT-LLP-W-EAKWTKIYLP-PS-SPLQS---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLLTGYSLNDLWAKIHFFIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVLSSIGSFISLTAVILMIFIIWEAFASKREIASVELTTTNIEWLYGCPPPYHTFEQPVFVKS----------MPHPAQLGFQDATSPIMEELTYFHDHTLMIVFLISTLVLYIIVLMLTTKLTHTSTMDAQEVETIWTILPAIILVLIALPSLRILYMMDEIYNPHLTVKAMGHQWYWSYEYTDYEDLSFDSYMIPTKDLTPGQLRLLEVDNRVVLPMELPIRMLISSEDVLHAWAVPSLGLKADAIPGRLNQVTLTSTRPGLYYGQCSEICGSNHSFMPITLEMTTLKYFEKWSHTMQ----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSMLLMTVGLVCTLLTMFQWWRDVIRESTFQGHHTPVVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLAPTPELGNCWPPVGIFPMNPLEVPLLNTAILLTSGVSITWAHHSLMEGDRKQMIQALFITIVLGAYFTVLQAMEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLVVCLLRQLHFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKNHPLMKIINHMFIDLPAPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWLIRNLHANGASMFFMCLFLHVGRGIYYGSYLYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALALVHLIFLHETGSNNPSGINPDADKIPFHPYYTIKDALGLVFLLLLLSSLALFTPDILGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASIMILLIIPLLHTSKQRSMAFRPVSQTLFWMLTANLLVLTWIGGQPVEQPYIIIGQLASILYFLLIIVLMPLAGMLENYMLK-PNG--------MF--------IMNLLLYIIPILLAVAFLTLIERKVLGYMQFRKGPNVVGPYGLLQPFADAVKLFTKEPLHPLSSSVLMYTLAPTLALTLALTIWTPLPMPYSLVDLNLGLLFILALSSLSVYSILWSGWASNSKYALAGALRAVAQTISYEVTLAIILLSIMMINGSFTLKNLIITQENMWLIVPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYTAGPFAMFFLAEYANIIIMNALTTMLFLGPSFNQDFTHVNTFTFMTKMMILTLTFLWVRASYPRFRYDQLMQLLWKNFLPMTLALCLWFISIPMALACV-P-PQI--MSP-YILTVIILSMLLGTSLTLISNHWFLAWMGLEINTLAIIPLMTHSSNMR-STESAIKYFLMQASASMLMLLAVVHNAWTNNQW--TIMQLSDQWSSTLLTTSLAMKLGLAPFHFWVPEVTQGIPLLSGMLLLTWQKIAPTSIMYQVSSSLNMEMIITL-AISSALLGGWGGLNQTHLRKILAYSSISHMGWMTIIIVINPTMTLINLFIYIIATLTMFITLNLSSTTKIKSL---ASLWHKSAPMTIIIMLTLLSLGGLPPLTGFLPKWLILQELIYNDNIFTATFMALSALLNLFFYMRIIYASSLTMFPAINSSKFHW-FHKPMKSLIII-------PTLTIISALLLPLSPLFILFN--MIN-LMITLLINSSLAMVIVMIAFWLPQLQLYLEKSNPYECGFDPMASARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQLTSLNYTITFAFSLIFLLTLGLAYEWSQKG--LEWTE-MTAIYLNLTMAFSLALMGVLVYRSHLMSTLLCLEGMMLSLFILMTLLITHYRMSSISMLPLTLLVFSACEAAIGLALLVKMFTSYGNDHVQNLNLLKCMLKIIIPTFMLIPLTWLSNKKWLWINPTIHSFMISFISL-TLLNNNMDLGYNYN-NSFSTDSLSSPLLTLSCWLLPLMIIASQNHLTKDSLTRKKTYLTMLFILQLSLIATFSSSELIMFYILFETTLIPTLIIITRWGNQNERLNAGLYFLFYTLMGSLPLLVALLFMHHNLGSLHILTMTILCNPMN-PSI-----SNSLLWFACTLAFMVKMPMYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITVFTEP-STTQLAYPFIILSMWGMIMTS--SICLRQTDMKSLIAYSSVSHMGLVILGAVMQSPLSFMGATVLMIAHGLTSSMMFCLANTNYERIHSRTMILARGLQMILPLMCSWWLLACLANLALPPSINLLGELTVIISSFSWSSFSIILLGLNTVITAMYSLYMLIMSQRGKFTHHASPIKPSLTREHILMTLHILPLIIISINPKFILGLTY------MNLLLNSSAMLTIIILTLPLLHN---AIFPNKT-HDFPLHCKNM-ITLAFTMSLTTLMTFILTGQETTITNWQWLSINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQIFMTDMS---TLALLGLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALTTTLIATS-LTAVYSLRIIYFALLNQPRSLPLSPLNENNPHLINSITRLALGSIFAGFILTMNISPSSMVPLTMPAIAKFSALLVSLLGLLMAMELNYMTTSLP--VLSTMNLHNFSNMLGHFTLIFHRLNPLASLHAGRQTATMLIDLNWYEKTGPQGLASTHSTISS-YITATQKGLLKTYFLS---FVISI--LIIMMII------------------ +>Phoca_vitulina_harbor_seal +----MNENLFASFATPT-MMGLPIVILIVLFPSILFPSPD-RLINNRLASIQQWLIQLTSKQMLSIHNRKGQTWALMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMD-ISTATAFITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLIMILSMI-LTLFITFQLKVSKHYFPT-NPEPK-HTPLLKN-SAP-W-EEKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYMLDDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFASKREVAAVELTTTNIEWLHGCPPPYHTFEEPTYVVL-K--------MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMTMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMYLLMLGLTTNTLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGIYFTLLQASEYYETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFVRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNSFIDLPTPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYMHVGRGLYYGSYTFTETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDLVQWIWGGFSVDKATLTRFFAFHFILPFVVLALDAVHLLFLHETGSNNPSGIMSDSDKIPFHPYYTIKDILGALLLILVLTLLVLFSPDLLGDPDNYIPPNPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLAIMPLLHTSKQRGMMFRPISQCLFWFLVADLLTLTWIGGQPVEHPYITVGQLASILYFTILLVLMPIASIIENNIL---KW--------MF--------MINIISLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSTTMFIMAPILALALALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIMMNIFTTLLFFGAFHNPYMPELYVINFTVKTLALTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPITSASI-P-PQT--MKP-PILIIIMSTVMSGTMIVLTSSHWLLTWIGFEMNMLAIIPILMKNHTPR-ATEASTKYFLTQATASMLLMMGIIINLMFSGEW--TISKIPNPIASGLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSINPKLLITM-AIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMTVILTYNPTLMVLNLTIYITMTLSTFMLFMHNSSTTTLSL---SNTWNKLPLMTSLILMLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYSTALTMFPSVNNMKMKW-QFESAKKIILL-------PPLIIISTMLLPMTPMMSILE---MN-MALTLFTNTALASLLVLIAFWLPQLNTYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHTDNLTTMLTMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYANIFLAFIMSLMGLLMYRSHLMSSLLCLEGMMLSLFVMMTVTILNNHFTLASMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTMMLMPLTWMSKPNMIWINTTAYSLLISLISL-SFLNQLGDNCMSLS-LLFFTDSLSAPLLALTTWLLPLMLMASQFHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLFIQNNMGTLNFLMIQLWAQPLP-SSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITVLLSP-LTNFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQVLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNITIILMGTNIIITALYSLYMLTTTQRGKYTYHIKNIKPSFTRENALMTLHLMPLLLLSLNPKIILGPIY---MKVINLFASS-IITTLSMLTLPIVLT---STSIYKN-KLYPQYVKTT-ISYAFMISMIPTTMFIYSGQEMIISNWHWMTIQTMKLTLSFKLDHFSMIFVPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAVLYNRIGDVGFIMAMAWFLINLNTWELQQIFISHHN-NLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNTMMQTTTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLYKVLPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLLTLVATS-MTAAYSTRIMFFTLLGQPRFNPMITINENSPLLINSIKRLLLGSIFAGYLISYNITPTSTPQMTMPYYLKLTALTVTLLGFILALELNLTSQSLK--LKYPSNLFKFSSLLGYFPTIIHRYMPMVNLSASQKLASTLLDAIWLESALPKSISYFHMKSSV--TISNQKGLIKLYFLS---FIITL--ILALMMI----------NSHE---- +>Dugong_dugon_dugong +----MNENLFTSFITPT-MMGLPIVILVIVFPAMLYPSPN-RLINNRLISIQQWLVQLILKQMLLIHNSKGRTWALMLISLILFIGSTNLLGLVPYTFTPTTQLSMNLGMAIPLWAGAVITGFRHKAKASLAHFLPQGTPITLIPMLVVIETISLFIQPMALAIRLTANITAGHLLMHLIGGAVLALTS-ISPAAATITFIILLLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTTTWFITILSML-ITLFILFQTKLLNYTYPL-NALPI-SPNVTNH-LTP-W-KMKWTKTYLP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHGGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALLWALGFIFLFTVGGLTGIVLANSSLDVVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFLIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVILMVFMVWEAFASKREVSTVELTTTNLEWLNGCPPSYHTFEEPAYVKI----------MPYPLQLGLQDATSPIMEELTHFHDHTLMIVFLISSLVLYIISSMLTTKLTHTSTMDAQEVETIWTILPAMILILIALPSLRILYMMDEINDPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTNDLEPGQLRLLEVDNRVVLPMEMPIRMLISSEDVLHSWAIPSMGLKTDAIPGRLNQATLMSSRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEDWSASLL----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLVMWFHYHSTILVLLGLLTNILTMYQWWRDVVREGTFQGHHTPTVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIHPLDPMEVPLLNTSVLLASGVTITWAHHSLMEGNRKQMLQALFITISLGIYFTLLQASEYHEASFSISDGIYGSTFFMATGFHGLHVIIGSTFLAVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKILNNSFIDLPTPVNISSWWNFGSLLGACLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWIIRYLHANGASMFFLCLYAHIGRGIYYGSYLYPETWNIGIVLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWVWGGFSVDKATLTRFFALHFILPFIVTALVMVHLLFLHETGSNNPTGLISDSDKIPFHPYYSVKDLLGLFLLILVLLLLTLFSPDMLGDPDNYTPANPLNTPPHIKPEWYFLFRYAILRSIPNKLGGVLALVLSILILALLPLLHTSKQRSLSFRPLSQCLFWILVADLITLTWIGGQPVEHPYIIIGQLASILYFSIILIFMPIAGLIENHLL---KW--------MF--------MINLFSLIIPILLAVAFLTLVERKTLGYMQLRKGPNVVGPYGLLQPFADAIKLFTKEPLRPLTSSKFMFTIAPALALTLALTMWVPLPMPYPLINMNLSMLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVSLAIILLPTMLMNGSFTLSTLTTTQEHLWLIFPLWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMTEYANIIMMNALTAILFLGTFHNPLLPEAHTINLILKTSLLTICFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMSIPIMLACI-P-PQT--MNP-LILSMILTTLAMGTMATMLSSNWLLAWMGLEMNMLAMIPILTMNPNPR-STEAATKYFLTQATASMLLMMAIMINFMLSGQW--SITKLPNTTVSSMALAALMMKLGLAPFHFWVPEVTQGTSLTSGMILLTWQKLAPLSILYQIDTSVDITILTVS-GLLSILVGGWGGLNQTQLRKILAYSSIAHMGWMLIIMPYNPSLTILNLLIYILMTLSIFMIMMNNHSTSTLTL---ALLWNKAPMMMILLTITLLSLGGLPPLSGFMPKWLIIHELTKNDSIILPMSMAMFALLNLYFYMRLIYSSSLTMFPSTNNMKMKW-HFTNRSHLTLL-------PPLIILSTLTLPLTPFLSILE---MN-LMLTLFTNATLASLLILIAFWLPQSYAYAEKVTPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQATNLNLVLFMALALITLLALSLAYEWIQKG--LEWVE-MPFIYINILLAFFISFIGLLMYRSHLMSSLLCLEGMMLSLYILGTLLCLNMHFTLSAMIPMILLVFAACEAAVGLALLVMVSNTYGLDHVQNLNLLQCMLKIIMPTAMLIPLTWLSSNSTMWVNITMHSFIISLISL-SLLNQPLDTGLNFS-LLFFSDHLSTPLLILTTWLLPLMLMASQHHLSQESNTRKKSYITMLILLQLFLIMTFAATELILLYIMFEATLIPTMVIITRWGNQPERLNAGLYFLFYTLLGSIPLLITLVSIQNTLGTLNLLIAPYWTQHLP-DSW-----SMNLLWLTCMMAFMVKMPLYGIHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITILLDP-LTKSMAYPFLMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLACLTNLALPPTINLIGELFIILASFSWSNYTILFMGFNMLLTASYTLYMLITTQRGKASHHAKTMKPSFTRENALMALHIIPLLLLSINPKIILGLMY------MNMLPTL-TLISLIILTSPIMLS---PLRIHET-RNFPHYVKMA-VSYAFMVSMVPAMIFMHSGHEAVISNWHWMTIHTLKLSLSFKLDYFSLIFMPVALFVTWSIMEFSLWYMNSDPYINRFFKYLLLFLITMIILITANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAMIYNRIGDVGFVAAMAWFLLHSNSWELQQIFLTVPK-GNTLPLTGLLLAAMGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEMNPSILTLTLCVGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLGDEQDIRKMGGLYKTLPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAMSSSYTNAWALLITFIATS-MTAVYSTRIIFFTLLGQPRYPTLIQINENNPLLTNAIKRLMLGSIFAGFLISSNLPPTTVPPMTMPHHLKFMALAVTLLGFALAIELSSFTYHLK--FDYPSHTYKFSNMLGYYPTIIHRSPPHYLLNTSQNLTSTIMDLAWLEKSIPKSLALMQKSAST--TISNQKGMIKLYFLS---FLISL--TLGLLLII----------------- +>Crocuta_crocuta_spotted_hyena +----MNENLFSSFTTPT-MMGLPIVVLITMFPSILFPSPN-RLINNRLVSLQQWLVQLTAKQMLTTHNHKGQTWALMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAATVMVGFRHKTKACLAHFLPQGTPFPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLALMK-ISTSTALIAFTVLVLLTILEFAVALIQGYVFTLLVSLYLHDNTMPQLDTSTWFITIMSMI-ITLFIMFQLKISKHTHPW-NPEPK-PPMTLKQ-PSP-W-EKKWTKIYSP-LS-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGSLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLTSSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMIWEAFASKREVAVVELTTTNLEWLHGCPPPYHTFEEPTYVSL-K--------MPYPFQLGFQDATSPIMEELLHFHDHTLMIVFLVSSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVILPVEMTIRMLISSEDVLHSWTVPSLGLKTDAIPGRLNQTTLMGVRPGLYYGQCSEICGSNHSFMPIVLELVPLTYFEKWSVTML----------MTHQTHTYHMVNPSPWPLTGALSALLMTSGLVMWFHFNSMLLLMLGMTTNLLTMLQWWRDIIRESTFQGHHTPTVQKGLRYGMVLFIISEVFFFTGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALSITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFIRQLKYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINKSFIDLPTPSNISAWWNFGSLLGICLVLQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHIGRGMYYGSYTLPETWNTGILLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWVWGGFSVDKATLTRFFALHFILPFIVLALVTVHLLFLHETGSNNPSGMTSDTDKIPFHPYYTTKDILGLLLLILMLLLLTLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILVLTMVPLLHTSKQRGMTFRPISQCLFWLLVVDLLTLTWIGGQPVEHPYTIIGQLASITYFSIILILMPISGIIENHLL---KW--------ML--------TLNILSLTIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADALKLFTKEPLRPLTSSTSMFIMAPILALSLALIMWVPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLATLITTQEHTWLILPAWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIIMMNSLTTILFFGAFHNPYMPELYTVNFTTKTLLLTAMFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIITASI-P-PQT--MKP-PILITIMFTVVAGTTIVLTSSHWLTIWIGFEMNLLAIIPILMKKHNPR-ATEAATKYFLMQATASMLLMMGIIINLLHSGQW--TMSKNTNPMASTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAPLSILYQISPTLNPNLLMPM-AIASVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAITPYNPTMMILNLMIYIIMTLTTFMLFMHSSSTTTSSL---SQTWNKTPLTTALILALMMSLGGLPPLSGFTPKWMIIQELTKNEMITTPTLLATTALLNLYFYMRLAYATALTMFPSTNNMKMKW-QFNTTKKMILL-------PPLTVLSTLLLPLTPLMSILD---MN-MMMALLINTALSTLLALIAFWLPQLNVYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNDLSTMLTMALLLISLLAASLAYEWTQKG--LEWAE-MSIVYINILLAFVTSLLGLLIYRSHLMSSLLCLEGMMLSLFIMMTVVILNNHFTLASMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTTMLIPLTWLSKSNMIWINSTTHSLLISLISL-SYLNQFSDNSLNFS-LLFFSDPLSAPLLALTTWLLPLMLTASQNHLSKETIARKKLYITMLTLLQLFLIMTFTATELIMFYILFEATLAPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLYIQNTTGSLNFLIAQYWVKPIS-TTW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITVLLNP-LTGQMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLANLALPPTINLLGELFVMMASFSWSNTTIALMGTNIIITALYSLYMLITTLRGKQTDHVKNIKPSFTRENALMALHLLPLLLLSLNPKIVLGPIH------MNLFNSL-TMTAMFILLLPIIMT---STQMYKS-SLYPSYVKTT-TSYAFAIVMIPALMFIYSGQEAIISNWHWMTVQTLKLSMSFKLDYFSIMFMPVALFVTRSIMEFSIWYMHADPYINRFFKYLLMFLITMIILVTANNLFQLFVGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLTNSNTWEFQQIFATKHE-SLNTPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQSKTAQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKSMPFTTTALIVGSLALTGMPFLTGFYSKDLIIETASTSHTNAWALLMTLIATS-LTAAYSTRIMFFTLLEQPRFNSLSPINENNPLLINSIKHLLIGSIFAGYLISHNIPPTTTPQTTMPHYLKLIALMATITGFVLALELSLVTKNLK--LNPASNMFKFSNLLGYFPTIIHRSLPLANLTMSQKSASTLLDLIWLENVLPKSISYFQMKSST--IVSNQKGLIKLYFLS---FMITL--TISLLLL----------NYHE---- +>Semnopithecus_entellus_ +----MNENLFAPFTAPS-LLGLPAVMPIILFPTLLISTSK-GLINNRLVTIQQNLIQVVLKQMMMTQSTKGQAWSLMLMSLFIFIATTNLLGLLPHSFTPTAQLSMNLAMAIPLWAGTVITGLRFKTKNSLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGNAALALSI-NNFFASSLILAPLMALMILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFITIITML-PTLYLIMQLKLLKTTYYF-SPSQK-ASDMQSF-NNP-W-QLKWTKICLP-LS-QLHHS---MLINRWLFSTNHKDIGTLYLLFGAWAGTAGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNLSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNITWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQICAKAHFIIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSVGSFISLVAMLLMVYMIWEAFASKRKVLLIEQPTSNLEWLYGSPPPYHTFDEPTFIKT-K--------MAHPVQLGLQDATSPIMEELIAFHDHAFMIVTLISFLVLYVLSSVLTTKLTNTNITDAQEMETIWTVLPAVILVLIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAIPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGAFSALLMTSGLIMWFHFYSTILLMLGLLTSMLTMYQWWRDIIRESTYQGHHTAPVQKGLRYGMILFIISEAFLFAGFFWAFYHSSLAPTPHLGGHWPPTGIIPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKQTIQALFITILLGIYFTLLQISEYYEAPFTISDGIYGSTFFIATGFHGFHVIIGSTFLTVCFIRQLLYHFTSKHHFGFEAAAWYWHFVDVVWLLLYISIYWWGS--MTATRKANLIMKMINHSLTDLPTPSNISAWWNFGSLLATCLMLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGIILLLMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWLWGGYSIDNPTLTRFFTLHFILPFIIATFTILHLLFLHETGSNNPCGIPSDSDKIPFHPYYTTKDILGIALLLLILMTLVLFSPDLLSDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILTIVPMLHKSKQQSMMFRPLSQFLLWFLIMILLILTWIGSQPVNQPFIAIGQAASMMYFITILILMPLASLIENNLL---K---------MF--------TMNLLLITLPILAAMAFLTLTERKLLGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYIIAPALAFFIALLLWMPLPMPNSLINLNLGLLFILAASSLTVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSILLTSGSFNIYTLITTQEHLWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTAMIFLGTLYPIYSPELFTTCFVSKTLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLAFLMWYISVPIMISGI-P-PQN--MNP-LAQLVIYFTMIMGTFITSLSSHWFLAWAGLEMNMLAFTSILIKKANSR-STEAATKYFLVQSTASMILMMAIMCNNLFPGQW--AMMNNPNQLSTMVMMMALAMKLGMAPFHFWIPEVTQGTPLIPGLLLLTWQKLAPISIMYQMHSSINTNALMAL-SALSIMTGSWGGLNQTQLRKILAYSSITHMGWMMMTLTYNPNITTFYLFTYIILTTTAFLALNLNSNTTTLML---SRTWNKLTWLMPLMSSTLLSMGGLPPLTGFLPKWITIQELTKNNNFIMPTIMITMTLLNLYFYLRLIYIISMTLLPTSNNTKMKW-QFENTKPMPLI-------PLLIILTTFLLPLSPTTLTIF---MN-LMFALTINTLLTLFLMIIMFWLPQLSSYAEKANPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNIPAMAKSSITLITILTLSLAYEWTQKG--LDWTE-MPIIYMNIMLSFIISLLGMLIYRSHLMSSLLCLEGMMLSLFIMSTLMALNMHFPLANIVPVALLVFAACEAAVGLALLVSISNTYGLDYVHNLSLLQCMLKMICPTIMLMPMTWFSKNSMIWINLTMHSLIISIIPI-LFFNQTSNNLIGYS-TYFSSDPLSTPLLTLTAWLLPLMVMASQYHLHNESPSRKKLYLSMMILLQISLIMTFMATELILFYILFETTLIPTLIIITRWGNQAERLNASTYFLFYTLAGSLPLLIMLMYTQNSLGSLNIMLLTLTAQKLT-ITW-----SHSLTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMIRLTSILNP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVTMASLIQTPWSFTGAVILMIAHGLTSSMLFCLANSNYERTHSRIMMLSRGLQTLLPLMAFWWFMANLTNLALPPTINLIGELLVVVTSFSWSHVTIMFTGLNMLITALYSLHMFTTTQRGVLTFHIISMKPSFTRENMLMFMHMSPIILLSLNPSIIMGFTP--------MHTSI-VMLTLTSLVFPAIMA---LIKPNKN-YLYPNYVKTT-MMYAFIISLLPTALYILLDQDTIISNWHWTTIQSLELVMSFKLDYFSMLFTPIALFVTWCIMEFSLWYMNSDPNINQFFKYLLIFLITMLILITANNLFQFFIGWEGVGIMSFLLISWWHARTDANTAAIQAILYNRIGDIGLVLAMAWFFLNYNSWDFQQMFILNSG-LNSLPLMGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPMTENNILIQSLTLCLGAITTIFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLTIGSLALTGMPFLTGFYSKDLIIETASTSYTNAWALSITLIATS-LTSAYSTRTIILTLTGQPRFSASVYINENNPALLNPMKRLTMGSLFAGFVIINNITPTMYPPLTMPLYLKFLALCVVTLGFLMALDLTLMTNKLK--MDAPSHMFKFSNMLGYYPTTIHRMIPYQNLIMSQNLAFLLLDLIWLEKSMPKTISHTHTVASM--ITTTQKGMIKLYFLS---FLIPL--LMIPLLMM----------------- +>Saimiri_oerstedii_citrinellus_ +----MTQNLFTIFNIPV-VLGMPLTVLIIMFPSMLILPPN-NTINNRFSSIQQWLIQLTLKQMMITHSTTGRTWSLMLLTLITFISLNNLLGLTPYAFTPTTQLSMNIGMAIPLWMATVLMGLRLKMKTSLAHLLPQGTPTLLIPMLIIIETISLFIQPVALAVRLTANITAGHLLMHLLGTASLTLLS-IYLSSSLVTIIVIILLITLELGVALIQAYVFTLLVSLYLHNNSMPQLDTSPWPMVILSMI-VTLFYITQLKMLNFISHT-NPLFK-SIKTKEY-KTA-W-KPKWPKTYSP-SL-MSQ-----MFMNRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRAELGQPGSLMEDDHIFNVIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGPSVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVFITAVLLLLSLPVLAAGITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSAAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIISSVGSFISLVAVILMIFMIWEAFSSKRKVLVIEQTSTNLEWLYGCPPPYHTFEESTYVKL----------MATPAQLGLQNATSPIMEELIAFHDHALMIIFLISSLVLYIMSLMLTTKLTHTSTMNAQEIEMIWTILPAIILIMIALPSLRILYMTDEFIKPYLTLKAIGHQWYWSYEYSDYEDLAFDSYIMPTYFLEPGEFRLLEVDNRTTLPMEADIRMLVSSHDVLHSWAVPSLGVKTDAIPGRLNQIMLASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWAS-------------MTHQTHPYHMVSPSPWPLTGALSAFLLTSGLIMWFHFYLTLLLTAGLLASMATMFQWWRDVVRESTYQGHHTPPVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPQTGGHWPPTGILPLDPMEVPLLNTAVLLASGVTITWTHHSLMESNQKKSTQALAMTIALGVYFTLLQMSEYSETPFTISDGIYGSTFFMATGFHGLHVIIGTTFLTMCYIRQQLHHFTPSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTSPRKTHPLTKIINNSFIDLPTPSNISFWWNLGSLLGACLIIQITTGLFLAMHYIPDTQTAFSSVAHIARDVNHGWTIRYMHTNGASMFFMCLFLHIGRGLYYGSFLSRETWNIGTILLLTTMATAFMGYVLPWGQMSLWGATVITNLLSAIPYVGYSLVEWVWGGFSVDKATLTRFFTFHFVLPFIIAALATIHLLFLHETGSNNPSGMTSNPDKITFHPYYTIKDILGLILLLLLLMSLTLFMPDLLTDPDNYTLANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLMTIPTMHLSNQQSMTFRPITQIMFWVLTANLLTLTWIGGQPVEYPFTIIGQIASIMYFLIITALIPLSALIENKLL---KW--------MF--------MINLLLLIVPALIAMAFLTLTERKILGYMQLRKGPNTIGPYGMLQPIADAMKLFTKEPLLPTTSTTTLYVTAPVLALSVALILWTPLPMPHPLVNFNLGLLFVLATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNIHSLITTQEHSWLLLPAWPLTTMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTITIFMATPHNTALPESYTANFMIKTLLLTALFLWIRTAYPRLRYDQLMHLLWKKFLPLTLALCMWYISLPTLTSSI-P-PQT--MNP-IAHLFISLTILMGTMIAMFSSHWFLIWMGLELNMLAIVPTLAKSTNPR-STEASTKYFLVQATASMIFLMITLLNYLSSGQW--TINPFLHQTLSTTMLIALMMKLGMAPLHFWLPEVTQGIPLTPTMLILTWQKLAPMSIITQIYPSMNLNILLTI-SILSIMAGSWGGLNQTQLRKILAYSSITHMGWMMAVLFHDPNITVLNLLIYILLTIPTLLIFNLNSNMTILSL---SHTWNKFTWVMPMFPMMMMSLGGLPPLTGFSPKWAIMQELTKNSNPTLPLTIAMLTLMNLYFYMRLTYSISMTMFPSSNNTKINW-QLKHMKLTPLM-------APLMISSMFLLPTMPLMLLT----MY-LTLSLLTSISLTLLLIIITFWIPQLNLYVEKYNPYECGFDPTTSAHLPFSMKFFLVAITFLLFDLEIALLLPLPWTMQTNNLMLTINVILILLIILALGLAYEWTQEG--LDWAK-MPFMYINVTLAYLMSLLGLSIYRSHLMSSLLCLEGMMLSLFIMTTLMTLNLHLVLMYMMPIALLVFAACEAAVGLALLFLISNLYGLDYVQNLNLLQCMLKIILPTTMLFPMTWLSKDHMLWINMMLWSLMISILTL-MLLYMPN-NPYNLS-LISFSDSLTAPLLTLTTWLLPLMTLATQHHLYHNSPSRKKVYISMLILLQISLIMTFTATELILFYILFETTLVPTLIIISRWGYQPERLHASSYFLFYTLAGSLPLLITLLFHLDNLGSLNMLTMMIKTKELL-PSW-----TNNIMWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRIIPILNS-LTEKMNYPFLILSLWGMTMTS--LICLRQTDLKSLIAYSSVSHMALVILAILIQTPWSFTGAMILMIAHGFTSSMLFCLANSNYERIHSRTMAFTRGLQTLFPLLGLWWLLANLANLALPPAINLVGELLTIVSSFSWSNFTIMFTGLNMLITALYSLHMYASTQRGPLTYSTSNMKPMFTRENVLMFMHMTPILLLTLSPKVIMGPSP-------MMHFSI-TLMTLITLLAPILAT---FINPNKS-TLYPHYVKLA-IIYALITSTLSMMLFILTGQESMISNWHWMTIQTIKLSLSFKMDFFSIMFTPVALFVTWSIVEFSMWYMSSDPNMNQFLKYLLIFLITMLILISSNNLFQLFIGWEGMGIMSFLLISWWYGRMDANTAALQAILYNRIGDIGFILAMTWSILYSNSWDFQQMFILNPT-SNTFPLMSLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLIIRFYPMTENSPLIQTLALSLGAITTLFTAICALTQNDMKKIVAFSTSSQLG--LMMVTVGINQPHLAFLHICTHAFFKAMMFLCAGSIIHSLNNEQDIRKMGGLLKALPLTTSSLAIGSLALMGTPFLAGFYSKDLIIEAANTSYTNAWALTTTLVATS-LTAMYSIRIMFYTLTGHPRFTTLISINENNPLLKNPISRLAVGSIFAGFLISNCVLPASCPQITMPYYIKLMALGTTTLGLLLAMELSLMTNNVK--SSTPVKTYYFSNMLGFYSTTTHRLKPYSSLATSQNFASALLDLLWLEKSMPKMTAQTQSSISM--ATSAQKGLIKLYFLS---LLITP--ALALLLTI----------------- +>Phacochoerus_africanus_Common_warthog +----MNENLFASFITPT-MMGLPIVTLIIMFPSLLFPTPK-RLINNRMISIQQWLTQLTSKQMMAIHNQKGQTWSLMLMSLIMFIGSTNILGLLPHSFTPTTQLSMNLGMAIPLWAATVFTGFRHKTKASLAHFLPQGTPVPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALLN-INTMVASITFIILIMLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFLTIMSMT-MTLFILFQLKISNYSYPL-NPEPT-EMKTQKH-STP-W-EMKWTKIYLP-LS-LPLR----MFVNRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQAWAKVHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSAVELTSTNLEWLHGCPPPYHTFEEPTYINL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGEMRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSTSMLTG--------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSIFLLSLGLLTNTLTMYQWWRDIIRESTFQGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALGITIALGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIINNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFICLFIHVGRGLYYGSYMFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALATVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGALFMMLILLILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVASILILILMPMLHTSKQRSMMFRPLSQCLFWVLVADLITLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPITSIIENNLL---KW--------MF--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADALKLFTKEPLRPATSSTSMFIIAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLITTQEHIWMIFTSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNAFTAILFLGAFHDPHTSELYTINFVLKTLTLTIIFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHISLPIMTAGI-P-PQT--MNP-MIYATLVMTLMSGTMLVMISSHWLLIWMGFEMNLLAITPVLMKNFNPR-AMEAATKYFLTQATASMMLMMAIIINLLYSGQW--TITKMFNPTAMMIMTMALAMKLGLSPFHFWVPEVTQGISLQAGLLLLTWQKLAPLSVLCQISQSINPNLMLTM-AMLSILVGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNTTMTILNLLIYITMTLAMFMLLIHNSTTTILSL---SHTWNKTPIITSLMMMTLLSMGGLPPLSGFMPKWMIIQEMTKNESIIMPTLMAMTALLNLYFYMRLAYSSSLTMFPSTNNMKMKW-QFEYTKQMKLL-------PTMIVLSTLILPMTPALSSLN---MN-IMLTLLMNVTLASLLVLIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNDLKTMLTMALFLLTLLAASLAYEWTQKG--LEWTE-MPLVYMNIIMAFAIALMGLLMYRSHLMSSLLCLEGMMLSLFIMSTLIVLNTHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGNDYVQNLNLLQCMLKIIVPTTMLLPMTWMSKHNMIWINATVHSLLISLISL-SLLNQLSDNSLNFS-LMFFSDSLSTPLLILTTWLLPLMLMASQSHLSKETTTRKKLYITMLILLQLFLIMTFTATELILFYILFEATLVPTLIIITRWGNQTERLSAGLYFLFYTLAGSLPLLVALVYIQNTMGSLNFLIIHYWSHPLS-NTW-----SNIFMWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTILNP-LTNYMAYPFLMLSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERVHSRTMILARGLQTFLPLMATWWLMASLTNLALPPSINLIGELLIIMSSFSWSNITIILMGANMMITALYSLYMLIMTQRGKYSHHINNIKPSFTRENTLMALHMLPLLLLTLNPKMILGPLY------MNSFAPL-TLTTLTILTMPIMMS---NSNIYKT-NLYPNYVKNT-VSCAFILSLIPLLMFIHTGQETIISNWHWMTLQTMKLSLSFKMDYFSVMFIPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLLFLITMMILVTANNLFQLFIGWEGVGVMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFVLSMAWFMSHSNAWDFQQIFMLNSK-CPNMPLMGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMETNKLVQTITLCLGAITTLFTALCAITQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICMHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLYKAMPLTTTALIIGSLALTGMPYLTGFYSKDLIIEAANVSHTNAWALLMTLIATS-LTAAYSTRIIFFALLGQPRFSPLVLINENNPLLINSIMRLLTGSIFAGFIISNSIPPMTMPNMTMPLYMKMTALVATIMGFMLALELNNMTYYLK--FNYSSQTYKFSNMLGYYPSIMHRLPTYHNLSMSQKSASSLLDLIWLETILPKTTSYIQTKMSI--MVSNQKGLVKLYFLS---FLITI--MMSMMLF----------NYHE---- +>Balaenoptera_physalus_Fin_whale +----MNENLFAPFMIPV-MLGIPITTLIIILPSMLFPAPN-RLINNRTIAIQQWLTKLTSKQLMNVHSPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNVGMAIPLWAGTVTTGFRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPVAWAVRLTANITAGHLLMHLIGETTLALMN-INLFSAFITFTILALLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSMWLLTILSML-LTLFVLFQLKISKHSYSP-NPKLA-HTKTQKQ-QAP-W-NTTWTKIYLP-LL---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFMIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFTSKREVLAVDLTSTNLEWLNGCPPPYHTFEEPAFVNP-KWS------MAYPFQLGFQDAASPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEVNNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLEVFEKWSVSML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMLLLTLGLSTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIRPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIALGLYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSNHHFGFERAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNDAFVDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYAHMGRGLYYGSYAFRETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAIVHLIFLHETGSNNPTGIPSDMDKIPFHPYHTIKDILGALLLILILLMLTLFAPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAFIPMLHTSNQRSMMFRPFSQFLFWVLVADLLTLTWIGGQPVEHPYMIVGQLASILYFLLILVLMPVTSLIENKLM---KW--------MF--------MINILTLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPVLALTLALTMWSPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLATTQEQLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMLTAILFLGTFHNPHNPELYTANLIIKTLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI-P-PQT--MNP-LILIILLTTLILGTMMVVTSSHWLLAWIGFEMNMMAFIPIMMKNPTPR-ATEASTKYLLTQATASALLMMAVIINLMHSGQW--TITKLFNPTASTLMTVALAIKLGLAPFHFWVPEVTQGIPLTTGLILLTWQKLAPLSILYQISPSINLHLMLIM-SLLSILMGGWGGLNQTQLRKIMAYSSIAHMGWMTAILLYNPTLTLLNLLIYITMTFTMFMLFIQNSTTTTLSL---SQTWNKMPVITTLTMLTLLSMGGLPPLSGFMPKWMIIQELTKNDMLIVPTFMAITALLNLYFYMRLTYSTALTLFPSTNNMKMKW-QFNSTKRTPLL-------PTAIVISTMLLPLTPMLSILL---MN-LLLTLLTNTTLALLLVFIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQSNNLNTMLTMALFLISLLAASLAYEWTQEG--LEWAE-MTLIHMNILMAFSMSLMGLLMYRSHLMSALLCLEGMMLSLFVLAALTILSSHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKNNLIWINSTAHSLLISFSSL-LLLNQLNDNSLNYS-LMFFSDPLSTPLLILTMWLLPLMLMASQSHLIKEPPVRKKLYITMLITLQALLIMTFTATELILFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNTTGSLNFLLLQHWAQPLS-TSW-----SNIFMWLACMMAFLVKMPLYGLYLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSMLNP-LTEHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILPGGLQVFLPLMASWWLLASLTNLALPPTINLIGELLVVMSVFSWSNPTILLMGTNIVITALYSLYMLIMTQRGKHTHHINNITPSFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSF-TLLTLLILTTPIMMS---HTGSHVN-NKYQSYVKNI-VFCAFITSLVPAMVYLHTNQETLISNWHWITIQTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLLASMAWFLSNMNTWDLEQIFMLNQN-PLNFPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLMENNKLIQTVTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPFTTTALIIGCLALTGMPFLTGFYSKDPIIEAATSSYTNAWALLLTLIATS-LTAVYSTRIIFFALLGQPRFPPSTTINENNPLLINPIKRLLVGSIFAGFILSNSIPPMTTPLMTMPLHLKLTALAMTTLGFIIAFEINLDTQNLK--HKHPSNSFKFSTLLGYFPTIMHRLPPHLDLLMSQKLATSLLDLTWLETILPKTTALIQLKAST--LTSNQQGLIKLYFLS---FLITI--TLSMILF----------NYPE---- +>Lasiurus_borealis_red_bat +----MNENLFASFITPT-MMGLPIVVLIVMFPSILFPSTN-RLINNRLITVQQWLVRLVTKQMMSIHNKKGQTWALMLISLIMFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVILGFRHKLKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGSATLALMD-ISMTTALITFIILVMLTMLEFAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFITIVSMI-ITLFIMFQLKVSNHYYYL-NPEPL-ATKLQEH-TTP-W-ETKWTKIYLP-LS-SHQR----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTMSTTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVVLMVFMVWEAFASKREVLVVELPSTNLEWLHGCPPPYHTFEEPTYVVP-K--------MAYPFQLGFQDATSPIMEELLSFHDHALMIVFLISSLVLYIISLMLTTSLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPAMTIKTMGHQWYWSYEYTDYEDLMFDSYMVPTHELNPGQLRLLEVDNRVVLPAELTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKYFEKWSLSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSTTLLLIGLTTNSLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLAPTPELGGFWPPAGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMMQGLLITIILGLYFTILQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLAKIVNSSFIDLPAPSNISSWWNFGSLLGVCLGLQILTGLFLAMHYTADIETAFTSVSHICRNVNYGWLLRYLHANGASMFFICLYLHIGRGLYYGSYMYKETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGKTIVEWIWGSYSVDKPTLTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPMGIPSNMDMIPFHPYYTIKDILGFGFFLMAFLAITLFYPDMLGEPDNYMPADPMVTPPHIKPEWYFLFAYAILRSVPNKLGGVLALAFSILILVIMPLIHTSKQRSMSFRPISQCMFWLLVINLVTLTWIGGQPIDHPYTIIGQVASITYFFIIIVMMPLTSLVENHLL---KW--------MY--------FVNLLTTIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSPALFIIAPTLALTLALMMWTPLPMPYPLINMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVMSVLLMSGTFTLATLIITQEYIWLVIPAWPLMMMWFISTLAETNRAPFDLMEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNTLTTILFMGAYNNPMLPELYSVNLVIKTLLLTVLFLWVRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHITLPIILASI-P-PQT--MNP-MTFSLILMTMISGTMMVMISSHWFMVWVGFEMNMLAMIPLLTKQHNPR-STEAATKYFLTQATASMVLMLSAIINLLYTGHW--SIMKLMNPMASTMMTIALTMKLGLAPFHFWVPEVTQGIPLLSGMILLTWQKLAPLSILYMISPLVNTTLLMFM-SLLSIAIGGWGGLNQTQLRKIMAYSSITHLGWMVSILTYNPTMMLLNLYIYIPMTVTTFMLLMVSSATTTTSL---SRTWNKLPIITMIILITMLSLGGLPPLTGFLPKWLIIQEMTKNSNTLVSTLMALMALLNLYFYTRITYTTSLTMFPTTNNLKINW-QVMNSKQSPYL-------PIMTTISTLILPLSPMILVLD---MN-FMLTLFINTVLALLLVTISFWLPQMNTYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDKLTNMLFMSLLLILLLVISLAYEWTQKG--LEWTE-MSFMYVNIMLAFTISLTGLLMYRSHLMSSLLCLEGLVLSLFVLMTATILVTHTTLANMLPIIMLVFAACEAALGLSLLVAVSNTYGVDHVQNLNLLQCMLKIIIPTMMLIPLTWLSKNNMLWINSTVYSLMISMTCL-PLMNQPCDNNLNLS-LLFFSDSLSTPLLMLTTWLLPLMIIASQHHLSNEPIAQKKIYITMMILLQIFLIMTFSATELIMFYILFEATLVPTLIMITRWGGQAERLNAGIYFLFYTLAGSLPLLVALTYTQSTTGSLNLLLSPYWTDLST-LIW-----SSSALWLAYMLAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLMLSP-SSSFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAVLIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQMILPLMAAWWMLASLTNLALPPSINLIGELFVTMAMFSWSNLSMILLGINITITALYTLYMLIMTQRGKNTYHIQNIKPTFTRENTLMTLHLTPLVLLMINPKIILGTPY------MNMYSTM-MLLSLLILILPLLGT---LNKPAND-KSYPEYVKTM-VSYSFMTSLPPAILFIQLGQEMMISNWHWMTVQTMKLSLSFKFDFFSMIFVPVALFITWSIMEFSMWYMHSDPNINSFFKYLLMFLVTMMILVTSNNIFQLFIGWEGVGIMSFLLIGWWYGRTEANTAALQAILYNRIGDIGFILSMAWFMANTNSWEIQQITMLSLD-NNTLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPMMENNKFAQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFFHICTHAFFKAMLFLCSGSIIHSLDNEQDIRKMGGLFKPMPFTTTALIVGSLALTGTPFLTGFYSKDLIIETANTSYTNAWALLLTLIATS-LTAVYSTRIIFYALLGKPRFPSLILINENNPLLINPITRLLVGSIFAGFILSNNMTPSTVPQMTMPMHLKLTALIITLAGFMLALELSLMTLDLK--YKYPASPMKFSAQFGYFPSIMHRIHPMIGLSIGQKSATMLLDQVWLENSLPKLIAKTQQVSST--IVSNQKGMIKFYSLS---FLVSI--TIAIMTL----------NFLG---- +>Eulemur_macaco_macaco_black_lemur +----MNENLFASFITPT-IVGIPIVIFIIMIPSILFPSPT-RLINNRLTSLQQWLIQLILKQLMLIHNIKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAAAVIKGFRHKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLIS-ISPATASITFIILTLLTILELAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITILSMI-LTLLTIFQLKISKFNYPL-SLTLK-DTNKHSY-TNP-W-ETKWTKICLP-LS-LPQQL---MFINRWFYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDTWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSIGSFISLTAVMLMVFMIWEAFASKREVLMVELTPTNLEWLHGCPPPYHTFEEPTYVKA----------MAYPVQLGFQDAASPIMEELLYFHDHTLMIMFLISSLVLYIISLMLTTELIHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEISTPSLTLKTMGHQWYWSYEYTDYENLCFDSYMTPPSDLKPGELRLLEVDNRVVLPTELPIRMLISSEDVLHSWTIPSLGVKTDAIPGRLNQATLMASRPGVYYGQCSEICGANHSFMPIVLELVPLKHFEEWLLSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNTTMLLSMGMLTNLLTMYQWWRDIVREGTFQGHHTSIVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGDRTHMLQALLITITLGIYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MNNIRKNHPLMKIMNNSFIDLPAPSNISSWWNFGSLLGACLALQIITGLFLAMHYTADTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFLCLFIHIGRGLYYGSFTLTETWNMGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVLVHLLFLHETGSNNPLGTSSDSDKIPFHPYYTIKDLLGLLLLILLVMMLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILAIIPTLHMAKQRSMLFRPLSQCLFWTLTADLFVLTWIGGQPVEYPFITIGQAASILYFALILILMPMVSLIENKML---KW--------MF--------MVNLLLLIVPILLAMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPLPHPLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLIISSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHTPEMYTMSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLMSCI-P-PQM--MKP-TILMLIMLTIFTGTTLTMISSHWLLMWIGLEINMLAIVPILMKKANPR-STEAATKYFLTQATASMLLMFTIVMNAMYSGQW--GTTNMYSQLVSSTIILALTMKLGMTPFHFWVPEVTQGIPLMPGMLLLTWQKLAPISIMLQIYPSMNPNILLLI-TMLSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMMAILMYCPSMTILNLLIYLMLTIAMFTMLNVNTSTTTLAL---SNLWNKAPAMTITILISLLSLGGLPPLTGFLPKWIIVQELTKNNNITLATTMAILALLNLYFYLRLIYSTSLTMFPTLNNLKMKW-QFQQTKQMFLL-------PPLITLTTLTLPLSPALLILN---MN-LPLALTTNIVLTLLLVTIAFWLPQLNIYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAAQTTKPNLMLTVALILISILAAGLAYEWLQKG--LEWVE-MPSISTNIILAFITALLGMLIFRSHLMSSLLCLEGMMLSMFILSTLTILNLHFTTSFMMPILLLVFAACEAAVGLALLVTVSNTYGLDYIQNLNLLQCMLKIIIPTIMLFPVTWYSNNNMIWINTTSHSLLISLASL-SFLNQSNDNSNNFS-LTFFSDPLSSPLVILTMWLLPLMILASQYHLTKESWTLKKLYLSMLISLQMFLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYIQNYLGSLNMLTMKLYFQEMP-NSW-----SNNILWMACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMILDP-LTNHMAYPFLMLCLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVVVGILIQTPWSFMGATILMVAHGLTSSMLFCLANSNYERIHSRTMLLARGIQALLPLMATWWLLASLTNLALPPSINLIGELFVTMASFSWSNITIILVGLNMVITALYSLYMLIITQRGKLTYHMHNLNPSLTRENTLMSMHMLPLLLLTLNPKIILGFMY------MNMYTSF-TLVTLMILMLPIIMN---TMNAYKD-YPYTLHVKSS-IACAFTTSLIPTTLFISSGQEAIIFHWHWMTIQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFIMAMAWFLMYSNTWEFQQMFMLNYD-PSMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKTIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNMNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWALAITLIATS-MTAIYSTRIIFYALLGQPRFATSTPINENNPLLINSIKRLTLGSIFAGFFLTNNILPMNVPQMTMPLHLKLAALAVTTMGFALAMELNLMTKNLS--LKLPSHSFKFSNSLGYYPTTTHRLIPSYNLTLSQNTASLLLDLIWLEKTMPKNLSHLQMLSST--IISNQTGLIKFYFLS---FLMSL--LFILLLFM----------------- +>Macaca_tonkeana_Tonkean_macaque +----MNENLFAPFSSPT-ILNQPATIPIILFPTLLVLTSK-HPINNRLITIQQNLTQLALKQMMVTHNAKGLTWSLMLMSLITFITMTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVVMGLRFKTKDSLAHLLPQGTPTPLIPMLVMIETISLLIQPVALAVRLTANITAGHLLMHLIGNAVLALST-TNFFMTLPTSMLLMLLTILEIAVALIQAYVFTLLVSLYLHNNTMPQLDTSTWFTTIMTML-LTLYLIMQLKLLNMNHYQ-PPLTK-NPNLQVH-NIR-W-QPKWTKTCLP-HS-QAQQF---MLTNRWLFSTNHKDIGTLYLLFGAWAGVMGTALSLLIRAELGQPGSLLGNDHIYNVIVTAHAFIMIFFTVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASAVVEAGAGTGWTVYPPLAGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIVNMKPPAMSQYQTPLFVWSILITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGMVSHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFMHWFPLFSGYTLNQTCAKAHFIVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSFISLVAVVLMIYMIWEAFASKRKALPIEQPLTSLEWLNGCPPPYHTFEEPAYIKL-NEKGGSRTPMAHPVQLNLQDATSPIMEELITFHDHAFMAMLLISFLVLYALLSTLTTKLTNTNITDAQEMETIWTILPAIILILIALPSLRILYLTDEINDPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHAYHMVKPSPWPLTGALSAFLMTSGLIMWFHFYSTTLLMLGLLTNTLTLYQWWRDIVRESTYQGHHTTPVQKSLRYGMTLFIISEVFFFIGFFWAFYHSSLAPTPCLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMNNNRNQTIQALFITILLGTYFTLLQISEYFEAPFTISDGIYGSTFFITTGFHGLHVIIGSTFLFICLIRQLLYHFTSNHHFGFEAAAWYWHFVDVIWLLLYISIYWWGS--MTPMRKSNPIMKMINHSLIDLPTPPNLSMWWNFGSLLAACLILQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWTTRYLHANGASMLFICLFLHVGRGLYYGSYLLLETWNIGIMLLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDIVQWIWGGYAIGNPTLTRFFTLHFILPFIIVALTTVHLLFLHETGSNNPCGISSNSDKIAFHPYYTVKDILGLVLLLFVLATLTLFSPDLLNDPNNYIPADPLNTPPHIKPEWYFLFAYTILRSVPNKLGGVLALFLSILILAAIPMLHKSKQQSMMFRPLSQSLFWLLITILLTLTWVGSEPMTQPLVTIGQVASTMYFITILILMPLASLIENNLL---KWT-------MT--------TMNLLLLIMPTLAAMAFLTLVERKLLGCMQLRKGPNVVGPYGLLQPFADAVKLFTKEPLKPSTSSTTLYIIAPALAFFVTLLLWTPLPMPNALINFNLGLLFTLAMLSLIVYSILWSGWASNSNYALIGALRAVAQTISYEVTLTIILLSVLLMSGSFNLNTLITTQEHLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNTEYAAGPFALFFMAEYTNIIMMNALTTTIFLGTFYPIRWPELFTTCFIIKTLSLTSLFLWIRATYPRFRYDQLMHLLWKSFLPLTLALLMWSTSTPIAISSI-P-PQT--MNP-LAQLIIYTTMITGTLITALSSHWFLAWTGLEMNMLAFIPILMKKTNLR-STEAATKYFLMQSTASMILMMAIISNNLLSGCW--TMTSYINQLPSMMMTTALAMKLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQIHPSINTHILLTL-STLSIMVGSWGGLNQTQLRKILGYSSITHVGWMMMTLVYNPTTTTLYLTMYIILTTTMFQILNLSMSTTTLML---ARTWNKSTHLTPLTALTLMSLGGLPPLTGFLPKWVIIQELTMNNNFLIPSIMTIMTLLNLYFYMRLIYTTSLTLLPTPNNMKMTW-RLENTKPTLLI-------SSLTTISTLLLPISPLILTTH---MN-LVLALMINTLLTLLLMIIMFWLPQLNPYAEKTSPYECGFDPSNSARTPFSMKFFLIAITFLLFDLEIALLLSLPWAIQTTSLPMMIKSTIAFIIILILSLAYEWTQKG--LDWDE-MTPTHMNIMLAFTISLLGMLIYRSHLMASLLCLEGMMMSLFIMTTLIALNTCSPLINIMPIILLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQCMLKMIIPTTMLLPTTWLSKNNTIWINLTMHSLIISLIPL-LYFNQTNTNLLNHS-TYLSSDPLTTPLLMLTVWLLPLMIMASQYHLCNEPPSQKKLFLSMMILLQITLILTFMATELIMFYILFETTLIPTLIIITKWGSQAERLNASTYFLFYTLTGSLPLLIMLSYTYNNTGTLNITLLTLTNQKLT-TTW-----SHNFAWLACMMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTPILNP-LTEYMAYPFLMLSLWGMIMTS--LTCLRQTDLKSLIAYSSVSHMALVIVAALIQTPWSFSGATILMIAHGLTSSMYFCLANSNYERTHSRIMLLSRGLQILLPLAAFWWLTASLTNLALPPTINLLGELFVITTSFSWSQITIVLTGLNMLITALYSLHMFVTTQRGTLTHHMINMKPPFTRENTLMFMHLAPIVLLSLNPNIILGFTS-------MMHIPI-MMTTLISLTLPIFAS---LVSPNKK-RPYPNYVKTT-VMYAFITSLTSTTLYTFLNQETTIWSWHWMMTQTLNLTLSFKLDYFSMMFIPIALFITWSIMEFSLWYMSSDPNIDRFFKYLLIFLITMLILVTANNLFQFFVGWEGVGIMSFLLISWWHARTDANTAAIQAILYNRIGDIGLILAMAWFLLHYNSWDFQQMLALNSN-SSSLPLMGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLHPLMEANMLIQNLTLCLGAITTLFMAICALAQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLTIGSLALTGMPFLTGFYSKDLIIEATNMSYTNAWALFITTIATS-LTSAYTTRTILLTLTGQPRFPALTSINENNPALLNPIKRLTMGSMITGFLITNSIPPTSPLQPTMPLYLKLSALYATALGFLAALDLTLMTNKLK--MKNPSQTFKFSSMLGYFPTTIHRMIPYQNLLMSQNLALLLLDLTWLEKSMPKMISQTHTTASM--AMTPQKGMIKLYSLS---FLIPL--TLTLFLMM----------------- +>Galago_moholi_Moholi_bushbaby +----MNQNLFASFITPT-MMGLPIVILIIMFPLILFPAPT-RLVNNRLTSMQQWLTQLILKQLMTTHNTKGRTWSLMLISLIMFIGSTNLLGLLPHTFTPTTQLSMNLGMALPLWTATVLTGFRHKTKASLAHFLPQGTPPPLIPMLVLIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALTS-ISPATASITFTILILLSALELAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWTISIISMA-LTLFTLFQLKFSKFLYPL-NPVQK-TMKTMKQ-DNP-W-EKKWTKTYLP-LS-LPLQ----MFVNRWLYSTNHKDIGTLYLIFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVIITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVSYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNINWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFTLDPTWAKIHFAIMFAGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSIGSFISLTAVMLMIFMVWEAFASKREVLMVDLTTTNLEWLHGCPPPYHTFEEPTYVKA----------MAHAVQYGFQDAAAPIMEELLYFHDHTLMIVFMISSLVLYIISLMLSTELTHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEIETPSLTLKTVGHQWYWSYEYTDYDKLCFDSYMTPTPDLEPGDLRLLEVDNRVVLPTEMSIRMLITSEDVLHSWTVPALGIKTDAIPGRLNQATLMTSRVGIYYGQCSEICGANHSYMPIVLELVPLKYFEEWLLKTL----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNNTTLLSLGFLANTLTMLQWWRDIIREGTFQGHHTPTVQKGLRYGMILFIISEVFFFAGFFWSFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGHRKHMTQALTTTIILGLYFTFLQASEYFETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLLICLLRQLNFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKQHPLAKMINHSFIDLPAPSNISSWWNFGSLLGLCLMIQIITGLFLAMHYTSDTSTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFTHIGRGLYYGSFTFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTGLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMIHLLFLHETGSNNPSGISSDSDKIPFHPYYTIKDLLGAILLLLSLFSLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILALIPYLHTAKQRSMMFRPLSQCLYWMLVADLFTLTWIGGQPVENPFITIGQTASIIYFLIVLILMPLTNLLENKLL---KW--------MF--------MMNLLLLIMPIILAMAFLTLLERKVLGYMQLRKGPNVVGPNGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALSIALIMWAPIPIPLPLINMNLGVLFILASSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIIMMSGSFTLSTLILTQEHSWLFLSSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTIFLSTIHNSYSPEYFSINFTLKTLILTIAFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPIILASI-P-PQT--MKP-SISPLIYLTLFTGTILTTISSHWLLIWIGLEMNMLAIIPILIKKAMPR-STEAATKYFLTQATASMLLMMAVIINTMQTGQW--T-TKIDNPTTSLIILLALTMKLGMAPFHFWLPEVTQGVTLVSGMILLTWQKLAPITIFLQLHQSMNTSILMPM-ALLSILIGGWGGLNQTQLRKILAFSSIAHMGWMAAVLTFNPSLTILNLLIYLILTFSMFMMLISNSNTTTLSL---THLWNKTPVFISMMLIILLSLGGLPPLSGFLPKWTIIQDLSKNYNIAMPTLMAILALLNLFFYMRLVYSSSLTMFPTTNSTKMKW-QFETLTPITIT-------APLITMSSMLIPLSPMISTLN---MN-TMLLLLVNTTLASIMVMVAFWLPQLNIYTEKYNPYECGFDPTGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWALQSHTLILTLVMTLLLIMILALGLAYEWTQKG--LEWEE-MPSISTNIILAFTTALLGVLIYRSHLMSSLLCLEGMMLSMFILVSLTILNLHFSLATVTPIILLVFAACEAAIGLALLVMVSNTYGMDYIQNLNLLQCMLKIIIPTIMLIPVTWLSNFQTLWTNITIYSFMISSISL-YLLYQPNSY-LNFS-TMYSSDTLSTPLLILTTWLLPLMTMASQHHLTKEPLTRKKLYITMLISLQVFLIVTFSASELILFYILFETTLIPTLIIITRWGNQTERLNAGLYFLFYTLLGSLPLLVILIHTQNLMGSLNLPILSFYFQDMSIFPW-----SNNLTWLACMLAFLVKMPLYGTHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITYILNP-ITDLMSYPFLILSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMMFCLANSNYERIHSRTMTLARGLQSLLPLMAIWWLTASLANLALPPTINLIGELIIIITTFSWSKLTILLTGLNTLITAIYSLYMFITTQRGKPTYHTHNIKPSHTRENILMSLHILPLLSLSLNPKIVLGLTL------MNMLLPTTTFTTLIVLTLPILFT---ITNNHND-TPFPNLVKSS-ISAAFMISLIPALLFIYLGQDSTITNWHWTTMQTLNLSTSLKLDYFSILFMPVALFVTWSIMEFSMWYMHSDPQINRFLKYLLLFLITMMILVTSNNFFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILFNRIGDIGFILSMTWFLLYSNSWDIQQMLILNPN-TNILPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLLENNKTIQTMTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLFKPMPFTASSLTIGNLALTGTPFLTGFYSKDLIIETANTSYTNAWALLLTLMATS-LTAVYSTRIIFFALLGQPRFLATTNINENNPLLINPIKRLATGSIVAGYIISNNIPPMSTPQMTMPIYLKLTAMAMTILGFYLAMEINLLTSNLK--LKHTYSPYLFSNSLGFFPTTIHRLLPNLDLKLSQNMSSLLLDLSWLEKTMPKNLSQLNMIASK--TISNQKGLIKLYFTS---FLTSV--LLTMALMT----------------- +>Lasiopodomys_mandarinus_Mandarin_vole +----MNQNLFASFITPT-MMGLPIVVLIIMLPSLLLTSSK-RLISNRLHSLQQWLVKLITKQMMLIHSPKGRTWSLMLVSLTLFIGSTNLLGLLPYTFTPTTQLSTNLGMAIPLWAGTVILGFRHKLKPSLAHFLPQGTPISLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTT-INLPTATITFIILTLLTTLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSTT-ATLFILMQLKTSLHNFPQ-TPSIK-SIKPVKT-NNP-W-EPKWTKIYLP-LS-LPPQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGPSVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLDEMWAKTHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLIMVFMIWEAFASKREVLNVDYTSTNLEWLHGCPPPYHTFEEPTFIKV-G--------MAYPFQLGLQDASSPIMEELMNFHDHTLMIVFLISSLVLYIITLMLTTKLTHTNTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLSFDSYMTPTSDLKPGELRLLEVDNRMVLPMELPIRMLTSSEDVLHSWAVPSLGLKTDAIPGRLNQMTISSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKVFEDWSLSMT----------MTHQTHAFHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSTTLLSLGLLSSLLTTYQWWRDVVREGTYQGHHTPIVQKGLRYGMVLFILSEVFFFAGFFWAFYHSSLAPTHDLGGCWPPTGISPLNPLEVPLLNTSVLLASGVSITWAHHSLTEGKRNNMNQALTITILLGIYFTLLQASEYFETPFSISDGIYGSTFFMATGFHGLHVIIGSTFLIICLLRQLKYHFTSNHHFGFEAAAWYWHFVDVVWLFLYLSIYWWGS--MTIIRKAHPLVKMINHSFIDLPTPSNISSWWNLGSLLGLCLFIQILTGLFLAMHYSPDTSTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGIYYGSYNMIETWNMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVLVHLLFLHESGSNNPTGLNSDADKIPFHPYYTTKDLLGAFMLLMTFMTLVLFFPDILGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRTLTFRPITQTVYWILTANLLILTWVGGQPVEHPFIIIGQTASITYFTIIIILMPIAGLIENNIL---NLD-------MY--------LINILTLLVPVLIAMAFLTLVERKMLGYMQLRKGPNIVGPYGILQPFADAMKLFIKEPLRPLTTSTTLFILAPTLSLSLALSLWIPLPMPHPLINLNLGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAMILLSVILMNGSFSIQSLIFTQEPLWLLIPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFMAEYMNIILMNALSTIVFMGPLHKTLIPELYTTDFMLKTLILTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLVLCMWHISIPIFMASI-P-PYA--MNP-ITLTIIYMTIMTGPVITLLSSNLFVMWVGLEMNLLALIPLMTKDSNPR-STEAATKYFLTQATASMILLLSILINFKQLGLW--VFQPETDSTVMTMVFISLAIKLGLAPFHSWLPEVTQGINLSAGLILLTWQKIAPLSILLQFHMLINPHLLTLS-AIISVLMGAWNGLNQTQTRKIMAYSSIAHMGWMISILSYNPTLTVLNLLIYITMTTPMFFIFNTHSFTSISSM---SLMWAKMPMAMPMVSLILLSTGGLPPLTGFLPKWAIITELMMNNNLPLASLMAMAALINLFFYTRMIYSTSLTTFPSNNNSKMYI-HQPHTKTNNTL-------PPMMIISTLMLPLSPLLL------MN-MMFILMINSALSTMLISLAFWLPHLNIYTEKANPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQFPDMSLLTTTAFMLITILALGLVYEWTHKG--LEWTE-MLPATLNIGLAFTFSLLGTLVFRSHLMSTLLCLEGMMLSLFVLATITPLNTHSMIMLPIPIIILVFAACEAAVGLALLAKISNTYGSDFVHNLNLLQCMLKIIFPLFMLLPLTWLSDSKKVWVNVTAYSFLINLVSI-SLLWQNNENSLSFS-TMFSTDPLSAPLLVLTTWLLPLMLLASQNHIKKEPEHSKKSYISLLICLQTMLVMTFSANELIMFYILFEATLIPTLVIITRWGNQTERLNAGIYFLFYTLGGSIPLLIALIFIQNSTGTLNFMLMMMSSSSTN-QTW-----SNNILWLASIMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRVSMMLDP-MTKYMAFPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAIMIQTPWSFMGATTLMIAHGLTSSLLFCLANTNYERIHSRTMIMTRGLQTVLPLMATWWIVASLANLALPPSINLVGELIITISLFSWSSPSIILLGMNILITSLYSMHMIIVTQRGKLTNHMINLQPSHTRESTLMTLHTLPLILLTTNPKLTMGPTL------MNTLSSS-ILLIITLLVLPMAIS---FTNMTKH-MDFPKYVTSC-IKCAFFISLVPLSSFFNSSTKLIITNWQWVSIGSIKFSLSLQFDFFSIIFLPVALYVTWSIMEFSMWYMHSDPNLTRFIKYLLMFLITMIILTTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFIAAMAWYCTKTNSWDFQQIFLM-DN-SNTPPLAGLLLAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLISNNSTILTAMLCLGAMTTLFTAICALTQNDIKKIVAFSTSSQLG--FMMVTLGINQPYLAFLHICTHAFFKAMLFLCAGSIIHNLNDEQDIRKMGGMAKTMPLTSSCLTIASLALTGVPFLTGFYSKDLIIETANTCYTNAWALLITLMATS-MTAVYSMRIIYFVLMTKPRFPPTITTNESNPLMINPIKRLALGSILAGFFISYNIPPTTIQVMTMPWYLKIMALLITMTGFAIALDLNHSTNNLK--PTKPSPMSLFSTSLGYFPTTMHRLLPLKMLNTSIKTALTMLDLIWLEKAIPKATSTIHTLASS--ILSGQKGKVKLYFLS---FLVTL--IAIPMILLI---------------- +>Panthera_tigris_amoyensis_Amoy_tiger +----MNENLFTSFTTPT-MMGLPVVVLIIMFPSILVPSPN-RLINNRLVSLRQWLVQLTSKQMLAIHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTAIPLIPMLVIIETISLFIQPVALAVRLTANITAGHLFMHLLGGAALALTN-ISTSIALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDDTMPQLDTSTWFITIISMI-MTLFIMFQLKISKHLYPS-SPEPK-STAALKQ-PNP-G-EKKWTKIYSP-LS-LPQQ----MFMNRWVFSTNHKDIVTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKVHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNAISSMGSFISLTAVMLMVFMMWEAFASKREVATVELTTTNLEWLHGCPPPYHTFEEPAYVLL-K--------MAYPFQLGFQDATSPIMEELSHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTQELKPGELRLLEVDNRVVLPMEVTIRVLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMGTRPGLYYGRCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALVMTSGLAMWFHYNSMLLLTLGMTTNLLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLKYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPTPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYMHVGRGMYYGSYTFSETWNIGIVLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIVSALAAVHLLFLHETGSNNPSGMVSDSDKIPFHPYYTIKDILGLLVLILTLMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILATIPALHTSKQRGMMFRPLSQCLFWLLVTDLLTLTWIGGQPVEHPFIAIGQLASILYFFILLVLMPISGIIENRLL---KW--------MF--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAMKLFTKEPLRPLTSSTFMFITAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLAALITTQEYIWLIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHSPYMPELYTINFTVKTLILTTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIITASI-P-PQT--MKP-PILTIIMLTVISGTMIVMTTSHWLMVWIGFEMNLLAIIPILMKKYNPR-AMEAATKYFLTQATASMLLMMGIIINLLHSGQW--TVSKDLNPMASIMMTTALAVKLGLAPFHFWVPEVTQGISLSSGLILLTWQKIAPLSILYQISPTINPNLLLAM-AIMSVMIGGWGGLNQTQLRKIMAYSSIAHMGWTTAIMMYSPTMMILNLTIYIIMTLTTFMLLMYNSTTTTLSL---SQTWNKTPLITSLILLLMMSLGGLPPLSGFIPKWMIIQELTKNEMIMMPTLLAMTALLNLYFYMRLTYTTALTMFPSNNCMKMKW-RFKCTKKMIFL-------PPLIVMSTMLLPLTPMLSVLD---MN-MMLALLTNTLLSTLLVLIAFWLPQLNIYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLSTMLITALLLISLLAASLAYEWTQKG--LEWTE-MSMVYVNIFLAFIVSLMGLLMYRSHLMSSLLCLEGMMLSLFIMMTMAVLSNHFTLASMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTAMLMPMTWLSKPSMIWINSTTYSFLISLVSL-SYLNQLGDNSLNLS-LLFFSDSLSAPLLVLTTWLLPLMLMASQSHLSKETLARKKLYITMLIILQLLLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNTTGTLNFLIIQYWAKPIS-ATW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-TTNQMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTILPLMAAWWLLASLANLALPPTINLIAELFVVVASFSWSNMTITLMGTNIIITALYTLYMLITTQRGKYTHHIKNINPSFTRENALMTLHLLPLFLLSLNPKIVLGPIY------MNLLTSS-MLTAMFILLLPIITS---NTQLYKS-NLYPHYVKTT-ISYAFTISMIPVMMFISSGQEMTISNWCWLSIQTLKLSLSFKLDYFSIIFIPVALFVTWSIMEFSMWYMHTDPYINQFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFIMAMAWFLTNLNAWNLQQIFITQHE-SLNMPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQNKAMQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKPMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLVTLIATS-LTAAYSTRIMFFALLGQPRFNSLSPINENNPHLINSIKRLLIGSIFAGYLISHNIPPTTIPQMTMPCHLKLTALAMTIMGFILALELNLVAKNLK--FKYPSNLFKFSNLLGYFPIVIHRLPSMMSLTMSQKSASMLLDMIWLENVLPKSISHFQMKMSI--AVSNQKGLVKLYFLS---FMITL--TLSLLLL----------SFHE---- +>Castor_canadensis_American_beaver +----MNENLFASFITPT-MMGLPIVTLIILFPSITLPTPN-RLINNRLVSIQQWAVKLITKQMMTMHNSKGRTWSLMLMSLIIFIGSTNLLGLFPYSFTPTTQLSMNLGMAIPLWAGAVILGFRHKMKSSLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAIRLTANITAGHLLMHLISGATLALLT-INPTTAFVTFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTITSMI-LTLFIIFQLKVKTFTFTP-NPTPK-NVESMKQ-KNP-W-EKKWTKIYLP-LL-LPLL----MFINRWLFSTNHKDIGTLYLMFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDQTWAKIHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTAWNTVSSMGSFISLTAVIIMVFMIWEAFASKREVGVIELTTTNLEWLHGCPPPYHTFEEPTYVKT-H--------MAYPLQLGLQDATSPIMEELLNFHDHTLMIVYLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINSPTLTVKTMGHQWYWSYEYTDYEDLAFDSYMIPTSELKPGELRLLEVDNRVVLPMEMPIRMLISSEDVLHSWAIPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKYFENWSLSML----------MTHQVHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSISLLTLGLLTNSLTMYQWWRDVVREGTFQGHHTPIVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGINPLDPLDVPLLNTSVLLASGVSITWAHHSLMEGSRKNMIQALSITILLGIYFTLLQASEYFETSFTISDGIYGSTFFMATGFHGLHVIIGSTFLLVCLTRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINHSFIDLPTPSNISAWWNFGSLLGICLILQIATGLFLAMHYTSDTATAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFMHVGRGIYYGSYTFTETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALATVHLLFLHETGSNNPSGINSDSDKIPFHPYFTIKDSLGVLLLLTPLLTLTLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILMAFPLLHTSKQRSLMFRPISQCLFWALAADLLTLTWIGGQPVEPPFIIIGQTASILYFFIILILMPTASLIENKML---KW--------MF--------IMNVLTLTIPILLAMAFLTLVERKILGYMQLRKGPNVVGPYGILQPFADALKLFIKEPMRPSTSSPLLFSIAPTLALTLALIMWIPLPMPQPLVNMNFGILFILATSSLSVYAILWSGWSSNSKYALIGALRAVAQTISYEVSLAIIVLSVMLMNGSFTMSSLITTQEHIWLIIPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIIMMNALTTIMFLGAFHNPLIPELYTINFAIKTLCLTMLFLWIRASYPRFRYDQLMHLLWKNFLPITLAACMLYTSIPVATSSI-P-PQM--MNP-TAKLIILPTVIMGTTITMMSSHWLVMWAGLEINMLAFIPLLINKGSPR-STEAATKYFMTQATASMLLLMAIVINTLDSGQW--SITHTQNYITSFMALMALTMKLGLAPFHLWVPEVTQGTTLMSGMLLLTWQKLAPISILYQLMPSINHQLLMLM-ALLSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMMAIIPYSPMAFMLNLTIYILLTITMFTMINHNTNTSTLTL---AHSWNVTPMITPMLLISLLSLGGLPPLTGFLPKWIIIDELTKNDLILMPTTMAMMALLNLYFYVRLVYSTTLTLFPTTSTTKMKW-RHPNNKPSILL-------PPLFIITTMTLPLTPLMFTLS---MN-LIIALTLNSFLATLLVTIAFWIPQINIYNEKSNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWALQTNNLYPVILMALALIVILSLGLAYEWSQKG--LEWNE-MSPILINLFLAFLASLLGALIYRSHLMSSLLCLEGMMLSIFITTTLIVLNYNITLSFMFPIIILVFAACEAAVGLALLVTMSNAYGTDYVQNLNLLQCMLKIIMPTIMLIPMTWFSKNNMIWINSTAHSLLISMLCL-FTLNQSNENSLNFS-LLFSSDALSAPLLILTAWLLPLMIMASQQHMNKEPVGRKKMYITMLVLLQTLLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYLQNSLGSLNLHILNNYSEQLN-LSW-----SNDLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLSP-ITNHMMYPFMLLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQSPWSFMGATALMVAHGLTSSVLFCLANTNYERVHSRTMLLTRGLQTMLPLMALWWLTASLTNLALPPTINLIGELMIITSSFSWSNFTILLMGINTLITALYTLYMLTTTQRGKPTYHMNNIHPSFTRENSLVFLHLLPLLLLSLNPKIILGTMF------MNMLALS-MIMTFIILMYPILMS---LTDFYKN-KSYSEHTKTS-VKLAFITSTIPMIMFIHLGNETIVSNWHWLTIHTTKLSLSLKLDYFSLLFVPVALFVTWSIMEFSLWYMHSDPNINQFLKYLLFFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTSALQAILYNRIGDIGFILSMAWFLVYSNSWDLQQLFM-DPK-MTTIPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLETNKLIMSTMLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGINQPYLSFLHICNHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLAKAMPFTTSSLVVGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLITLIATS-LTAVYSTRIIFFALLGQPRFHPLININENNPQLTNSIKRLLVGSIFAGFIISNNIIPMNNPTLTMPLYLKLMALAITMLGFTIAMELNNMTYNLK--LNLTSNTNSFSTMLGFFPAIMHRTSPKHTLMLSQKTASTLLDTTWTEKITPKLLAHVQIKASI--TVSNQKGMIKLYFLS---FLLSA--ALALTIII----------------- +>Muntiacus_crinifrons_black_muntjac +----MNENLFASFITPM-VLGLPLATLIVMFPSMLFPTSN-RLVNNRLISLQQWALQLVSKQMMGIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMIMSMF-LVLFIIFQLKISKHNFYF-NPEIL-LTKTQKQ-NTP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLEIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSIIVLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSDLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADEIPFHPYYTIKDILGILLLILFLMSLVLFVPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKVGGVLALISSILILILMPLLHTSKQRSMIFRPLSQCLFWVLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPITSSIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASILNYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLTTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILSTLMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFSLFMANSATTTLSL---SHTWNKMPVMSILILVTLLSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTLMAITALLNLYFYMRLTYSTALTMFPSVNNMKMKW-QFSTTKQMVLL-------PTMVILSTMLLPLTPILSVLE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVSLAGLLMYRSHLMSSLLCLEGMMLSLFVLATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWLSKGSMIWINSTTHSLLISLTGL-LLMNQLSDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLTASQHHLSKESLTRKKLYITMLILLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNITGSLNFLMLQYWMQPLP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNIPPSFTRENALMSLHILPLLLLSLNPKIILGTLY------MNLFSSF-TLTTLLLLIIPILIT---SSENYKT-SNYPFYVKTT-ISCAFLTSMIPTMMFIHTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLNPN-DSNMPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKNIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANMSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPALITINENNPFLMNSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPHYLKMMALAVTILGFILALEISNMTQNLK--LSYPTNIFKFSNMLGYFPTIMHRLAPYMNLTMSQKSASSLLDLIWLENILPKTTSLAQTKLSI--MVTSQKGLIKLYFLS---FLVTM--IISMILF----------NFHE---- +>Ornithorhynchus_anatinus_platypus +----MNENLFAPFITPT-VLGISVLPLIMIFPCLLFSTSN-RWVPNRLIALQLWLVRLITKQMMMMHNKQGRMWTLMLITLIIFIASTNLLGLLPYTFTPTTQLSMNMGMAIPLWMGTVLMGFRNKPKASLAHFLPQGTPTPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALSS-ISLTVSTITFTILFLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWYTTILLMI-LAIFCIFQLKMIKHLYMNVPLILNQELF-IKH-QTP-W-HSKWTKIYLP-PS-LLLQS---MFINRWLFSTNHKDIGTLYLLFGAWAGMAGTALSILIRSELGQPGSLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLVSSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGDIKWTPPMLWALGFIFLFTVGGLTGIVLANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLLSGFTLHPTWAKVHFTLMFVGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNALSSLGSFVSLTAVMVMIFMIWEAFASKREVLSVELTTTNIEWLHGCPPPYHTFEQPVYIKA----------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISTMLTTKLTHTNTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPNLTIKTLGHQWYWSYEYSDYEDLSFDSYMIPTQDLLPGQLRLLEVDNHLVLPIELPIRMLISSEDVLHSWALPSMGLKTDAIPGRLNQATITSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWTSSMMSTS-------MTHQTHAYHMVNPSPWPLTGAMSALLLTSGLIMWFHFNSYTLLLLGLLTNLISSYQWWRDIVREGTYQGHHTKIVQKGLRYGMILFIISEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGISPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQMLQALTITIALGLYFTALQAMEYYEASFTISDGVYGSTFFVATGFHGLHVIIGTTFLITCLVRQTLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MNNLRKTHPLIKIVNHSFIDLPTPSNISSWWNFGSLLGLCLIIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYMHANGASLFFMCIFLHIGRGLYYGSYTQTETWNIGVVLLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFVIAALAVIHLLFLHETGSNNPSGLNSDPDKIPFHPYYSVKDLVGFFMTILVLLTLVLFTPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVASILILILVPLLHTSYQRGLAFRPLTQMLFWILVTDLLTLTWIGGQPVEQPFIIIGQLASILYFLLITTLIPLTGLLENDLL---KW--------MF--------LVNLLILIIPVLLAVAFLTLLERKILGYMQFRKGPNIVGAHGLLQPIADAVKLFTKEPLRPLTSSIYMFILAPILALSLALTIWIPLPMPLPLIDLNLGLLFVLSVSGLSVYSILWSGWASNSKYALTGALRAVAQTISYEVTLAIILLSIMLINGSFTLTTLNLTQEYMWLIVPTWPLMLMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIIMNALTVILFFGTYHLIFLPEMSTTTFMIKTMLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPITLVTCLWYIMLPTTLSGL-P-PQM--MTP-MTTLIMLFSLLLGTTLTLTSSHWLLMWMGLEVSTLAIIPLLTYTNHPR-SIESAIKYFLTQATASMLLMFAASLNTWMTGHW--TLMQIDNTISSGIMTFALAMKLGLAPFHYWVPEVLQGSSLMSGMILLTWQKLAPISIIYQISPTLNMDILLTL-AISSTLLGGWNGLNQTQLRKVMAYSSIAHMGWMVLIIIYFPTLTTLNLTLYIMSTVALFTVFHTTNITKTKPL---SLMWNKAPIMTLAIILLLLSLGGLPPLTGFAPKWLVIQELIKHDNMIMATVLAITALLNLFFYMRIIYSSTLTTFPTTNNNKFHW-YSKSTKNPLSL-------PTLVILSTTLLPLTPMFITLS---MN-LVIALLINTGLATILVMVAFWLPQLYTYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIAILLPIPWASQTSSPYSLLSLSGVLLALLTLGLAYEWLQKG--LEWTE-MTTMFLNLLLAFTVALVGVFIYREHLMSTLLCLEGMMLSIFIMVALILLHHHLNSTMMLPLILLVFSACEAGVGLALLVKTSNSYGTDHINNLNLLQCMLKILIPTMMLLPLISYSKKEWVWINSSIYSLLISSFSL-LTLNQHMDLGLNFN-MSFSADSLSSPLLILSCWLLPLMILASQFHLMKEPMAHKRTYLMLLVILQIALLMAFSAVELIMYYILFETTLIPTLIVIARWGNQTERLNAGLYFLFYTLLGSLPLLVALIFIQTQLGSLHILLLTLTPNPLQ-DNW-----SNDILWLACMLAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEP-ISKFMAYPFIIMATWGMIMTS--SICLRQTDLKSMIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSSMLFCLANTNYERIHSRTMLLVRGLQMVLPLMSSWWLLASLANLGLPPTINLIGELMVIITTFSWSNFTLILLGLNTVITAIYSFYMLITVQRGKLTSHSLSINPSFTREHMIMTLHLLPLILLTLNPKLILGLTY------MNLLFFSSLLTALIILCIPLLLS---FTPYYKL-ENYPHHVKTM-IMWSFIISLVPMLSFLNGGVEATVTNWHWFTTQTFNLSMNFKLDLYTIMFLPIALLITWSIMEFSIWYMSSDPKINQFMKYLLIFLITMLTLISANNLFQLFIGWEGVGIMSFMLIGWWHARTDANTAALQAILYNRIGDIGFILAMAWFLIHTNSWEFQQMFLLHTN---LLPLLGLILAATGKSAQFGLHPWLPFAMEGPTPVSALLHSSTMVVAGIFLLVRFSPLLEQNSTALTMALCLGAITTLFTAACALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPFLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLINILPITSSALIIGSLALTGMPFLAGFYSKDLIIESLNTSNTNAWALSLTLVATT-FTAVYSTRVIFLALLNQPRFSPASSINENNPLLINPIKRLAIGSILAGFLLTSYINPTTLTPTTMPPFIKVTALVITILGFILALELYLTTNNLT--LKPHSQLHTFSNLLGYFPLIMHRKPTAQNFFLGQNMATMLIDLTWFEKSGPKGISSHQLTILT-SVTEAQKGLMKIYFLS---FLITP--PIIITLLLF---------------- +>Cercopithecus_albogularis_Sykes_monkey +----MNENLFTLFTTPT-ILNQPATIPIILSPMLLIPTSK-HLINNRLITIQHNLIQLTLKQMMINHNAKGQTWSLMLASLITFIIMTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVITGLRFKTKNSLAHLLPQGTPTLLIPMLVLIETTSLFIQPVTLAVRLTANITASHLLMHLIGNAMLALLT-INLPIALLTSMLLMLLTTLEIAVALIQAYVFTLLVSLYLHNNTMPQLDTSTWFITITTML-PTLYLIMQLKLLNTSYYK-PPSQK-NSNKQTP-NNH-W-QLKWTKIYLL-YS-RPQQ----MFINRWLFSTNHKDIGTLYLLFGTWAGIMGTALSLLIRAELGQPGSLLGSDHVYNVIVTAHAFIMIFFMVMPIMIGGSGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMTSAVVEAGAGTGWTVYPPLAGNLSHPGASVDLVIFSLHLAGISSILGAINFITTIVNMKPPAMSQYQTPLFVWSVLITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPTGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNINWSPAMLWALGFIFLFTMGGLTGIILANSSLDIMLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKAQFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSFISLVAVVLMIYMIWEAFASKRKALATKQPSTNLEWLNGCPPPYHTFEEPAYIKL-NEKGESRTPMAHPVQLGLQDATSPVMEELITFHDYALMTISLISFLVLYALSSTLTTKLTNTNITDAQEMETIWTILPAIILILIALPSLRILYLADEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQSHAYHMVKPSPWPLTGALSALLVTSGLIMWFHFYSTILLMLGLLTTSLTLHQWWRDIVRESTYQGHHTMPVQKNLRYGMALFIISEIFFFTGFFWAFYHSSLAPTPNLGGLWPPTGIVPLNPLEVPLLNTSVLLASGVTITWAHHNLMNNNRKQMTQALLITTLLGIYFTMLQISEYFEAPFTISDGIYGSTFFIATGFHGLHVIIGSTFLLICLIRQLLYHFTSSHHFGFEAAAWYWHFVDVVWLLLYISIYWWGS--MIPTRKSNPIMKMINHSLIDLPSPSNISMWWNFGSLLGFCLILQIITGLFLAMHYSPNTSSAFSSIAHITRDVNYGWIIHYLHANGASMFFICLFLHLGRGFYYGSFLLPKTWNTGIMLLLMTMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTNLVQWIWGGYSIGNPTLSRFFTLHFIMPFIITTLTIVHLLFLHETGSNNPCGISSDSDKITFHPYHTTKDILGLVLLLFILATLTLLSPDLLNDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALFLSILILAIVPMLHKSKQQSMMFRPLSQLLFWLLVTTLLTLTWIGSQPVSQPFIIIGQMASTIYFTTILILMPLTSLIENELL---KWT-------MV--------TTNLLLLIMSALAAMAFLTLVERKLLGYMQLRKGPNVVGPYGLLQPFADAVKLFTKEPLKPSTSTTTLYTIAPSLAFSIALLLWTPFPMPNPLINFNLGLLFILAMSSLIVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAMILLSVLLMSGSFNLTMLITTQEHLWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNIEYAAGPFAFIFMAEYMNIIMMNALTTTIFLGTFYPTHSPELFTACFVTKTLLLTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLTLLMWNISAPITTSSI-P-PQT--MNP-LAQLIIYITMIAGTLTTLLSSHWFLAWAGLETNMLAFIPILIKKTNLR-STEAATKYFLTQSTASMILMVAIIFNNLSSGHW--TMTNNIHQFPSLMMTTALAMKLGMAPFHFWIPEVTQGTPLIPGLLLLTWQKLAPTSIMYQIHPSINTHALLTL-STLSIIMGSWGGLNQTQLRKIMGYSSITHMGWTMMTLTYNPTITILYLTIYVTLTTTMFLILNLNSNTTTLTL---SLTWNKSAQLMPLTTSTLMSLGGLPPLTGFLPKWITIQELTMNNNFIIPSIAVTMTLLNLYFYMRLIYTTSVTLLPTPNNTKMEW-QLENTKPTLFI-------PTLITISTLLLPISPLILTTP---MN-LMLALTINTLLTSLLMIIMFWLPQLNSYAEKTNPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWALQTTNIPTTIKSSIALIIILALSLAYEWTQKG--LDWVE-MSPIFMNTTLAFTISLLGMLVYRSHLMASLLCLEGMMMAIFIMTTLMASNMHSSLTNIMPIMLLVFAACETAVGLALLISISNMHGLDHIHNLSLLQCMLKMIIPTTMLLPMTWFSKNGMIWINLTTHSLIISLIPL-LFFNQTNNNLLNYS-AYLSSDPLTTPLLTMTAWLLPLMTMASQYHLHNKTPMQKKLYLSTMISLQITLILTFMATELILFYILFETTLIPTLIIITKWGNQAERLNASTYFLFYMLTGSLPLLIMLTHTYNSAGSLNITLLTLTGQKLT-TTW-----SHNLAWLACMMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSIINP-LTEHMAYPFLTLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMSLVIMASLIQTPWSFSGATALMIAHGLTSPMLFCLANSNYERTHSRVMMLSRGLQTLLPLMTFWWFAANLTNLALPPTINLVGELFVIAASFSWSHTTIVLTGLNMLITALYSLHMFTTMQRGKLTHPTINMKPSFTRENTLMFMHLAPIILLSLKPNIILGFTP------MIMCTPI-MMTTLTSLTLPIIAT---LISPNKK-QSYPNYVKTT-TMYAFITSLLPTTLYLSLNQETTIWSWHWVMTQTLDLTLSFKLDYFSVMFTPVALFITWSIMEFSLWYMNSDPNINQFFKYLLIFLIAMLTLTTANNLFQLFIGWEGVGIMSFLLISWWYSRTDTNTAAIQAILYNRIGDIGLVLAMVWFLLHYNSWDIQQMLTLNSN-SNLLPLAGLLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVYLLIRFHPLMENNALIQNLTLCLGAITTIFTATCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLSKTMPLTSTSLLVGNLALTGMPFLTGFYSKDLIIEATNTSYTNAWALLITLIATS-LTSAYSTRTTLLTITGPPRFPVLVGINENNPTLLNPIKRLTMGSIIIGFLITNNIPPASLPQPTMPHYLKFSALYATTLGFLMALDLTLMTNKLK--MNNPSQMFKFSNLLGYFPATIHRMIPYQNLLMSQNLALLLLDSMWLEKSMPKMVTHTHTTASK--TVTTQKGMIKLYSLS---FLIPL--TLTLLLMV----------------- +>Saimiri_sciureus_common_squirrel_monkey +----MTQNLFTIFNIPV-VLGMPLAVLIIMFPSMLILPPN-NTINNRFSSIQQWLVQLTLKQMMITHSTTGRTWSLMLLTLITFISLNNLLGLTPYAFTPTTQLSMNIGMAIPLWMATVLMGLRLKTKTSLAHFLPQGTPTLLIPMLIIIETISLFIQPVALAVRLTANITAGHLLMHLLGTASLTLLS-IYLSSSLATIIVIILLITLELGVALIQAYVFTLLVSLYLHNNSMPQLDTSPWPMVILSMI-VTLFYITQLKMLNFISYT-NPLFK-SIKTKEH-KTT-W-KSKWPKTYSP-SL-MSQ-----MFMSRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRAELGQPGSLMEDDHIFNVIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGPSVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVFITAVLLLLSLPVLAAGITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSAAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIISSVGSFISLVAVILMIFMIWEAFSSKRKVLVIEQTSTNLEWLYGCPPPYHTFEESTYVKL----------MATPAQLGLQNATSPIMEELIAFHDHALMIIFLISSLVLYIMSLMLTTKLTHTSTMNAQEIEMIWTILPAIILIMIALPSLRILYMTDEFIKPYLTLKAIGHQWYWSYEYSDYEDLAFDSYIMPTYFLEPGEFRLLEVDNRTTLPMEADIRMLVSSHDVLHSWAVPSLGVKTDAIPGRLNQITLASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWASYLYIV--------MTHQTHPYHMVNPSPWPLTGALSAFLLTSGLIMWFHFYLTLLLTAGLLASMATMFQWWRDVVRESTYQGHHTPPVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPQTGGHWPPTGILPLDPMEVPLLNTAVLLASGVTITWTHHSLMEANQKESTQALAMTIALGIYFTLLQMSEYSETPFTISDGIYGSTFFMATGFHGLHVIIGTTFLTMCYIRQQLHHFTPNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTSPRKTHPLKKMINNSFIDLPTPSNISFWWNLGSLLGACLIIQITTGLFLAMHYTPDTQTAFSSVAHITRDVNHGWTIRYMHANGASMFFTCLFLHIGRGLYYGSFLSRETWNIGTILLLTTMATAFMGYVLPWGQMSLWGATVITNLLSAIPYIGSNLVEWVWGGFSVDKATLTRFFTFHFVLPFIIAALATIHLLFLHETGSNNPSGMTSNPDKITFHPYYTIKDILGLILLLLLLMSLTLFMPDLLTDPDNYTLANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLMIIPTTHLSNQQSMTFRPITQIMFWMLTANLLTLTWIGGQPVEYPFIIIGQIASIMYFLIITTLIPLSALIENKLL---KW--------MF--------MINLLLLIIPALIAMAFLTLTERKILGYMQLRKGPNTIGPYGMLQPIADAMKLFTKEPLLPTTSTTTLYVIAPILALSVALILWTPLPMPHPLVNFNLGLLFVLATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNIHSLITTQEHSWLLLPAWPLTTMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFMATPHNTALPESYTTNFMIKTLLLTALFLWIRTAYPRLRYDQLMHLLWKKFLPLTLALCMWYISLPTLTSSI-P-PQT--MNP-IAHLFISLTILMGTMIAMFSSHWFLIWMGLELNMLAIVPTLAKSTNPR-STEASTKYFLVQATASMIFLMTTLLNYLSSGQW--TINPFLHQTLSTTMLIALMMKLGMAPLHFWLPEVTQGIPLAPTMLILTWQKLAPMSIITQIYPSMNLNILLTI-SILSIMVGSWGGLNQTQLRKILAYSSITHMGWMMAVLFHDPNITMLNLLIYILLTIPMLLIFNLNSNMTALSL---SHTWNKFTWMMPMFPMMMMSLGGLPPLTGFSPKWAIMQELTKNSNPTLPLTIAMLTLMNLYFYMRLTYSISMTMFPTSNNTKINW-QLKHMKLTPLM-------APLMVSSMFLLPTMPLMLLM----MY-LTLSLLTSISLTLLLIIITFWIPQFNLYLEKYNPYECGFDPTTSAHLPFSMKFFLVAITFLLFDLEIALLLPLPWTMQTNNLMLTINVILILLIILALGLAYEWTQEG--LDWTQ-MPFMYINVTLAYLMSLLGLSIYRSHLMSSLLCLEGMMLSLFIMTTLMTLNLHLVLMYMMPIALLVFAACEAAVGLALLVLISNLYGLDYVQNLNLLQCMLKIILPTTMLFPMMWLSKDHMLWINMMLWSLLISTLTL-MLLYMPN-NPYNLS-LISFSDPLTAPLLVLTTWLLPLMTLATQHHLYHNSPSRKKVYISMLILLQISLIMTFTATELILFYILFETTLVPTLIIISRWGYQPERLHASSYFLFYTLMGSLPLLITLLFYLDNLGSLNMLTMMIKTKELL-PSW-----TNNIMWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRIIPILNS-LTEKMNYPFLILSLWGMTMTS--LICLRQADLKSLIAYSSVSHMALVILAILIQTPWSFTGAMILMIAHGFTSSMLFCLANSNYERIHSRTMTFTRGLQTLFPLMGLWWLLANLANLALPPAINLVGELLTIVSSFSWSNFTIMFTGLNMLITALYSLHMYASTQRGPLTYSTSNMKPMFTRENTLMFMHMTPILLLTLSPKVIMGPSP-------MMHFSI-TLMTLISLLAPILAT---LINPNKS-TLYPYYVKLA-IIYALITSTLSMMFFILTGQESMISNWHWMTIQTIKLSLSFKMDFFSIMFTPVALFVTWSIVEFSMWYMSSDPNMNQFLKYLLIFLITMLILISSNNLFQLFIGWEGMGIMSFLLISWWYGRTDANTAALQAILYNRIGDIGLILAMTWSILYSNSWDFQQMFILNST-PNTFPLMSLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLIIRFYPMTENNPLIQTLTLSLGAITTLFTAICALTQNDMKKIVAFSTSSQLG--LMMVTVGINQPHLAFLHICTHAFFKAMMFLCAGSIIHSLNNEQDIRKMGGLLKTLPLTTSSLTIGSLALMGTPFLAGFYSKDLIIEAANTSYTNAWALTTTLVATS-LTAMYSIRIMFYTLTGYPRFTTLISINENNPLLKNPINRLAVGSIFAGFLISNCVLPASCPQITMPYYIKLTALGTTTLGLLLAMELSLMTNNVK--LSTPVKTYYFSNMLGFYSTTTHRLKPHSSLATSQNFASALLDLLWLEKSMPKMTAQTQSSIST--ATSTQKGLIKLYFLS---FLITP--TLALLLTI----------------- +>Ochotona_curzoniae_black-lipped_pika +----MNENLFSSFITPS-TMGLPVVIIIIMFPIILFPTPT-RLINNRLIAIQQWLVQLILKQMMLIHNPKGRTWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAVPLWAGAVIMGFRYKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLALTS-ISPATATITFIILLLLTGLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILAML-ISLFALIQLKFYKYTFPT-NPSPA-GLKTEKQ-ITP-W-ESKWTKIYSP-LS-LPPQP---MFVNRWLFSTNHKDIGTLYMLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGVGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGVISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDPVWAKIHFAVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMIMVFMIWEAFASKREVSTVELTTTNLEWLHGCPPPYHTFEEPAYVKA----------MAYPFQMGFQDASSPIMEELMHFHDHTLMIVFLISTLVLYIIALMLSTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMELPVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKHFEAWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLMMWFHFHSFTLLSIGLLTNTLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFILSEVFFFAGFFWAFYHSSLAPTPELGGCWPPVGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMQQALLITILLGAYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCLLRQFNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIVNHSLIDLPAPSNISAWWNFGSLLGLCLGIQIITGLFLAMHYTSDTLTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGIYYGSYTYSETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFILPFIIAALVMVHLLFLHETGSNNPTGIISDADKIPFHPYYTIKDALGFLLLIALLLTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSIAILAVMPLLHTSKQRSMMFRPISQCLFWVLVADLLTLTWIGGQPVEHPFIIIGQLASFLYFSLILILMPTCSLIENKLL---KW--------MF--------LANIILLILPVLLAMAFLTLVERKILGYMQLRKGPNVVGPYGLLQPFADAVKLFIKEPLRPLTSSPFLFIIAPTLALTLALTMWIPIPMPYPLINMNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSSLIDTQEYMWILIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYTNIIMMNALTVTLFLGAFHDTLNPQLFTINFAAKTLLLTMAFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPVSLAGI-P-PYA--MNP-MVLAMITFTLATGTAIATFSSHWLLIWVGLEMNMLSIIPILTYKSNPR-STEAATKYFLTQATASMILMMAILLNLMYSGHW--TILNPNNHIPPFLLTIALTMKLGVAPFHFWLPEVAQGVNLKSSLLLLTWQKIAPLSILHQIHNSLNTPLLTLM-GLLSIMIGGWGGLNQTQLRKILAYSSIAHMGWMTTILVYNPDIMLLNLIIYITLTIPMFMLLIINSSTTALSL---AQTWNKTPLMTAAMLTILMSLGGLPPLTGFMPKWAIINELTKNNSIILPTLMAMLALLNLYFYMRLVYSTSLTMFPTTNNMKMKW-QFEFKNQAYLL-------SPLITVSTMSLPLLPLFISWY---MN-LILALFVNTLIPMILMIIAFWLPQTYTYSEKASPYECGFDPMGSARLPFSLKFFLVAITFLLFDLEIALLLPLPWASQTNNLTLMLTIALLLISILAMGLAYEWLQKG--LEWVE-MSITTLNIMVAFMMALLGMLVYRSHLMSSLLCLEGMMLSLFMLATIISLNMSFTNSFMFPVVLLVFAACEAAVGLALLVMVSNTYGMDYVHNLNLLQCMLKLIIPTMMLLPLTWWSSNKLLWINTTIHSLLITLMAL-LLMNQPNVHNLNFS-LMFSSDPLSTPLLILTFWLLPLMLIASQNHLSKESLLRKKLFISMLVLLQIFLIMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLYIHNTTGTLNFLVIQTLTTPLT-DSW-----SNSLLWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNP-VTEYMAYPFLLLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMAAWWLLASLANLALPPSINLIGELFVIISSFSWSNLTIILAGTNMLITALYTLYMLSTTQRGKLTYHINNMTPSFTREHTLMLLHLLPLILLSINPKIILGITY------MNLFSTL-STLTMLILTLPIIMS---LTNFFTH-PNFPLYVKNS-ISLAFTISLIPTILFLYTNQEMMLSNWHWTTINTMKLSISLKLDFFSMLFIPVALFVTWSIMEFSLWYMHSDPNINRFFKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLSMAWFLIHMNTWELQQIFMLEPN-NLTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLLESNKVAQSLILCLGATTTLFTALCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTLPFTSSALTIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLVATS-LTAIYSTRIIFFALLNQPRFPPVVTINENSPPLINSIKRLALGSIFAGFLISNNIQPLTIPPMTMPLYMKMTALTVTIMGFLLAMELNQLTLNLK--LTPRSKPFYFSNLLGFFPSTMHRLVPYTGLLFSLNIATSTLDMTWTEKAIPKTTANLQMNMSS--LVSTQKGLIKLYSLT---FLISL--LLAAFIL------------------ +>Vicugna_vicugna_vicugna +----MNENLFASFITPT-MMGLPIVTLVVMFPSMLFPTPA-RLINNRLISFQHWLIRLTSKQMMTIHNHKGQTWSLMLMSLIMFIGATNLLGLLPHSFTPTTQLSMNLGMAVPLWAGTVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLALMN-ISTLTALLTFVVLVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSML-MTLFILFQLKLSKHIYYS-TPEPK-FSKTHNQ-NTP-W-ETKWTKIYLP-LL-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGLIHWFPLFSGYTIDDTWAKIQFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSVGSFISLTAVMLMVFIVWEAFASKREVMTVELTATNLEWLHGCPPPYHTFEEPTYINL-K--------MPYPFQLGFQDATSPIMEELLYFHDHALMVVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPVLTVKTIGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLVTSEDVLHSWAVPSLGVKTDAVPGRLNQVTLMSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFEEWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHYNSSLLLSLGLITNMLTMYQWWRDIIRESTFQGHHTPSVQKGLRYGMVLFIVSEVLFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRTHMLQALFITIALGLYFTLLQASEYYEAPFTISDSVYGSTFFVATGFHGLHVIIGSTFLAVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLLKIVNNAFIDLPAPSNISSWWNFGSLLGICLIMQIMTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLYIHVGRGLYYGSYAFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAGVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGALLLILILLLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFIPLLHTSKQRSMMFRPISQCLFWTLVADLLTLTWIGGQPVEPPFIMIGQVASILYFSLILILMPVAGIIENHIL---KW--------MF--------MINILTLIVPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFTKEPLRPATSSITMFILAPILALTLALTMWIPLPMPQPLVDMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHMWMIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFMAEYANIIMMNAFTTILFFGAFHNPYMPELYTANFVLKTLLLTVTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPISTAGI-P-PQT--MNP-LIFSIILLTVMAGTLIVMISSHWLFIWIGFEMNMLAIIPILMKNFSPR-SMEASTKYFLTQATASMLLMLGVIINLMYSGQW--TTTKIFNQTSSIMITTALTMKLGLAPFHFWVPEVTQGIPLASGLILLTWQKLAPLSVLYQIAPSINSNMLLTM-SILSIMIGGWGGLNQTQLRKIMAYSSIGHMGWMTAVMVYSPTMTMLYLLVYLTMTITMFMLFMINSTTTLLSL---SQTWNKTPVITTLILTVMMSMGGLPPLSGFAPKWMIIQELTKNDSIILPTMMAMMALLNLYFYMRLTYSTALTMFPSSNNMKMKW-QFENTKRMPSL-------PIMVVLSTMMLPLTPMMSVLY---MN-LLLALLTNITLASLLVLIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWATQTNYLHTMLIMALLLISLLAISLAYEWTQKG--LEWTE-MSMVYMNIMLAFTMSLIGLLMYRSHLMSSLLCLEGMMLSLFVMASLMILSTHFTLASMMPIILLVFAACEAALGLALLVMISNTYGTDYVQNLNLLQCMLKIIFPSIMLIPLTWLSKNSMIWINPTMYSLLISLISL-SLLSQYSDNSTNFS-LLFFSDALSAPLLVLTTWLLPLMLIASQSHLSKEPLTRKKLYITMLILLQVLLIMTFTASELIMFYILFEATLVPTLIIITRWGNQTERLNAGSYFLFYTLAGSLPLLVALVYIQNTVGSLNFLIMQYWNQPLM-DSW-----SNALLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTAMLNP-LTEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATTLMVAHGLTSSMLFCLANTNYERTHSRTMILARGLQTLLPLMAMWWLLASLTNLALPPTINLLGELFVIMASFSWSNITIILMGANMMITALYSLYMLIMTQRGNYTHHINNIKPTYTRENSLMALHMLPLLMLSLNPKVIMGFTY------MNMFTTF-ALLTLLLLTLPIMMS---TSDIYKS-KQYPLYVKNT-IACAFTVSLIPTMMFIHLNQEVIISNWHWITIHTLKLSLSFKMDYFSMMFVPIALFVTWSIVEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVASMAWFLSNLNTWEMQQIFILSQD-CPTAPLMGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSAVLHSSTMVVAGVFLLIRFYPLMENNKTAQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKTMPFTTTALIIGSLALTGIPFLTGFYSKDMIIEAANTSYTNAWALLITLIATS-LTAIYSTRIIFYALLNQPRFPPLILINENNPLLINSIKRLLIGSIFAGFFISYNIPPMTVPQMTMPSHLKLTALLVTILGFTLAMEINTMTKNLK--FTQPSKSFKFSNLLGFFPIIMHRLVPYLNLLMSQKSASVLLDLVWLETALPKTLALMQVKAST--LVSDQKGLIKLYFLS---FLITL--TLIMILF----------NYPV---- +>Propithecus_coquereli_Coquerels_sifaka +----MNENLFASFITPT-IVGIPIVILIIAIPSILFPSPT-RLITSRLTSLQQWLIQLVLKQLMMMHSIKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTS-ISPATASITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITILSMI-LTLFIIFQLKVSKFNYPL-NPELK-TISMNKH-VSP-W-ETKWTKIYLP-LS-LPQQL---MFINRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSIGSFISLTAVMLMIFMIWEAFASKREVLMVELTPTNLEWLHGCPPPYHTFEEPAYVKM-P--------MAYPVQLGFQDAASPIMEELLYFHDHTLMIVFLISSLVLYIISLMLTTKLMHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEITTPSLTLKTMGHQWYWSYEYTDYEDLSFDSYMVPSSDLKPGELRLLEVDNRVVLPTELSIRMLISSEDVLHSWAVPSLGVKTDAIPGRLNQATLMTSRPGIYYGQCSEICGANHSFMPIVLELVPLKHFEEWLLSMF----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHHNSNTLLTLGLLTNLLTMYQWWRDVVREGTFQGHHTQAVQKGLRYGMILFIISEIFFFAGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTAVLLASGVSITWAHHDLMEGNRTHMLQALLITISLGIYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKNHPLIKIMNSSFIDLPAPSNISSWWNFGSLLGACLALQIITGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFLCLFIHVGRGLYYGSFVLSETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMVHLLFLHETGSNNPLGIPSNPDKIPFHPYYTIKDLLGLILLILPLMTLVFFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILAIIPLLQTAKQQSMMFRPLSQCLFWILVADLFTLTWIGGQPVEHPFITIGQAASILYFSLILIAMPTVSLMENKML---KW--------MF--------TLNLLLLIIPILLAMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPLINMNMGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEFTWLIIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPYMPQAYSTMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGI-P-PQM--MNP-TALMPITLTIFTGTMLTMISSHWLLIWMGLEMNMLAIIPVLAKKTNPR-STEAATKYFLTQATASMLLMMTIVINAMHTGQW--NITNTHNPLTSLTIIIALTMKLGMTPFHFWVPEVTQGVTLMAGMLLLTWQKLAPISIMMQIYPSMNMNILLAF-ALLSVLVGGWGGLNQTQLRKILAYSSIAHMGWMMAVLMFCPSLTILNLLIYLMLTITLFTMLNINTNTTTLTL---SILWNKSPTITLMILTSLLSLGGLPPLTGFLPKWVIVQELTKNNNIIMATIMVIMALLNLYFYMRLIYSTSLTMFPTFNNMKMKW-QFQTTKYTLFL-------PPLIALSTLSLPLSPILLTLS---MN-LSLTLMIDIFLALLLVVIAFWLPQLNVYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTINLNLMLTVALLLISILAAGLAYEWSQKG--LEWEE-MPSIFINIILAFATALLGTLVFRSHLMSSLLCLEGMMLSMFILSTLIILNMHFTMSFMMPILLLVFAACEAAVGLALLVMVSNTYGLDYIQNLNLLQCMLKIIVPTIMLFPVTWYSNNSKIWINTTSYSLLISFMGL-SFLNQPNNNSNNFS-MNFFSDPLSSPLLILTMWLLPLMIMASQYHLKKEPWLRKKSYLSMLISLQMFLVMTFTANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNSMGSLNLLTMNFWLKELP-NSW-----SSNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDP-TTKAMAYPFLMLCLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMASFSWSNISIILMGLNMLITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTILGPTLC-----MNLFSSL-TLITLTILALPIAMN---LT-NYKN-APFALHVKSS-IACAFITSLIPTTLFMFSGQEMIISNWHWMTIQTLKLSLSFKLDHFSILFVPVALFVTWSIMEFSMWYMNTDPNINQFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLYSNTWEFQQMFMLNQD-PNIIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPMMENNKTIQTMALCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKAMPFTSSSLIIGSLALTGMPFLTGFYSKDLIIESANTSNTNAWALVITLIATS-LTAIYSTRIIFYVLTNQPRFTTTININENNPLLINSIKRLAFGSIFAGFFLSYNTPPMNLPQMTMPTYLKLTALMVTITGFALAMELNLMTKNLK--FKLPSNMFKFSEQLGYFPTTMHRLMPSLNLNMSQKTASLLLDLIWLEKTMPKNLSHLQMTTSI--VVSNQKGLIKLYFFT---FLTSI--LLTTLLII----------------- +>Lama_guanicoe_guanaco +----MNENLFASFITPT-MMGLPIVTLVVMFPSMLFPTPA-RLINNRLISFQHWLIRLTSKQMMTIHNYKGQTWSLMLMSLIMFIGATNLLGLLPHSFTPTTQLSMNLGMAVPLWAGTVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLALMN-ISTLTALLTFVVLVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSML-MTLFILFQLKLSKHIYYS-TPEPK-FSKTHKQ-NTP-W-ETKWTKIYLP-LL-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGLIHWFPLFSGYTIDDTWAKIQFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSVGSFISLTAVMLMVFIVWEAFASKREVMTVELTATNLEWLHGCPPPYHTFEEPTYINL-K--------MPYPFQLGFQDATSPIMEELLYFHDHALMVVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPVLTVKTIGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLVTSEDVLHSWAVPSLGVKTDAVPGRLNQVTLMSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFEEWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHYNSSLLLSLGLITNMLTMYQWWRDIIRESTFQGHHTPSVQKGLRYGMVLFIVSEVLFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRTHMLQALFITIALGLYFTLLQASEYYEAPFTISDSVYGSTFFVATGFHGLHVIIGSTFLAVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLLKIVNNAFIDLPAPSNISSWWNFGSLLGICLIMQIMTGLFLAMHYTSDTATAFSSVAHICRDVNYGWIIRYLHANGASMFFICLYIHVGRGLYYGSYAFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTTLVEWIWGGFSVDKATLTRFFAFHFILPFVIAALAGVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGVLLLILTLLLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALIPLLHTSKQRSMMFRPISQCLFWTLVADLLTLTWIGGQPVEPPFIMIGQVASILYFSLILILMPVAGIIENHIL---KW--------MF--------MINILTLIVPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFTKEPLRPATSSITMFILAPILALTLALTMWIPLPMPQPLVDMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHMWMIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFMAEYANIIMMNAFTTILFFGAFHNPYMPELYTANFVLKTLLLTVTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPISTAGI-P-PQT--MNP-LIFSIILLTIMAGTLIVMISSHWLFIWIGFEMNMLAIIPVLMKNFSPR-SMEASTKYFLTQATASMLLMLGVIINLLYSGQW--TTTKIFNQTSSIMITTALTMKLGLAPFHFWVPEVTQGIPLASGLILLTWQKLAPLSVLYQIAPSINSNMLLTM-SVLSIMIGGWGGLNQTQLRKIMAYSSIGHMGWMTAVMVYNPTMTVLYLLMYLTMTITMFMLFMINSTTTLLSL---SQTWNKTPVITTLILTVMMSMGGLPPLSGFAPKWMIIQELTKNDSIILPTMMAMMALLNLYFYMRLTYSTALTMFPSSNNMKMKW-QFENTKRMPSL-------PIMVVLSTMMLPLTPMMSVLY---MN-LLLALLTNTTLASLLVLIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWATQTNHLHTMLTMALLLISLLAISLAYEWTQKG--LEWTE-MSMVYMNIMLAFTMSLIGLLMYRSHLMSSLLCLEGMMLSLFVMASLMILSTHFTLASMMPIILLVFAACEAALGLALLVMISNTYGTDYVQNLNLLQCMLKIIFPSIMLIPLTWLSKNSMIWINPTMYSLLISLISL-SLLSQYSDNSTNFS-LLFFSDALSAPLLVLTTWLLPLMLIASQSHLSKEPLTRKKLYITMLILLQVLLIMTFTASELIMFYILFEATLVPTLIIITRWGNQTERLNAGSYFLFYTLAGSLPLLVALVYIQNTVGSLNFLIMQYWNQPLM-DSW-----SNALLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTAMLNP-LTEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATTLMVAHGLTSSMLFCLANTNYERTHSRTMILARGLQTLLPLMAMWWLLASLTNLALPPTINLLGELFVIMASFSWSNITIILMGANMMITALYSLYMLIMTQRGNHTYHINNIKPTYTRENSLMALHMLPLLMLSLNPKVIMGFTY------MNMFTTF-ALLTLLLLTLPIMMS---TSDIYKS-KQYPLYVKNT-IACAFTVSLIPTMMFIHLNQEVIISNWHWITIHTLKLSLSFKMDYFSMMFVPIALFVTWSIVEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVASMAWFLSNLNTWEMQQIFILTQD-CPTAPLMGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNKTAQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKTMPFTTTALIIGSLALTGIPFLTGFYSKDMIIEAANTSYTNAWALFITLVATS-LTAIYSTRIIFYALLNQPRFPPLILINENNPLLISSIKRLLIGSIFAGFFISYNIPPMTVPQMTMPSHLKLAALLVTILGFILAMEINTMTKNLK--FTQPSKSFKFSNLLGFFPIIMHRLVPYLNLLMSQKSASVLLDLVWLEAALPKTLALMQVKAST--LVSDQKGLIKLYFLS---FLITL--TLIMILF----------NYPV---- +>Lama_glama_llama +----MNENLFASFITPT-MMGLPIVTLVVMFPSMLFPTPT-RLINNRLISFQHWLIRLTSKQMMTIHNYKGQTWSLMLMSLIMFIGATNLLGLLPHSFTPTTQLSMNLGMAVPLWAGTVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLALMN-ISTLTALITFVVLILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSML-MTLFILFQLKLSKHIYYP-TPEPK-FSKTHKQ-NTP-W-ETKWTKIYLP-LL-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGLIHWFPLFSGYTIDDTWAKIQFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSVGSFISLTAVILMVFIVWEAFASKREVMTVELTATNLEWLHGCPPPYHTFEEPTYINL-K--------MPYPFQLGFQDATSPIMEELLYFHDHALMVVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPVLTVKTIGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLVTSEDVLHSWAVPSLGVKTDAVPGRLNQVTLMSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFEEWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHYNSSLLLSLGLITNMLTMYQWWRDIIRESTFQGHHTPSVQKGLRYGMVLFIVSEVLFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRTHMLQALFITIALGLYFTLLQASEYYEAPFTISDSVYGSTFFVATGFHGLHVIIGSTFLAVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLLKIVNNAFIDLPAPSNISSWWNFGSLLGICLIMQIMTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLYIHVGRGLYYGSYAFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTTLVEWIWGGFSVDKATLTRFFAFHFILPFVIAALAGVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGALLLILTLLLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALIPLLHTSKQRSMMFRPISQCLFWTLVADLLTLTWIGGQPVEPPFIMIGQVASILYFSLILILMPVAGIIENHIL---KW--------MF--------MINILTLIVPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFTKEPLRPATSSITMFILAPILALTLALTMWIPLPMPQPLVDMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHMWMIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFMAEYANIIMMNAFTTILFFGAFHNPYMPELYTANFVLKTLLLTVTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPISTAGI-P-PQT--MNP-LIFSIILLTIMAGTLIVMISSHWLFIWIGFEMNMLAIIPVLMKNFSPR-SMEASTKYFLTQATASMLLMLGVIINLLYSGQW--TTTKIFNQTSSIMITTALTMKLGLAPFHFWVPEVTQGIPLASGLILLTWQKLAPLSVLYQIAPSINSNMLLTM-SVLSIMIGGWGGLNQTQLRKIMAYSSIGHMGWMTAVTVYNPTMTVLYLLMYLTMTITMFMLFMINSTTTLLSL---SQTWNKTPVITTLILTVMMSMGGLPPLSGFAPKWMIIQELTKNDSIILPTMMAMMALLNLYFYMRLAYSTALTMFPSSNNMKMKW-QFENTKRMPSL-------PIMVVLSTMMLPLTPMMSVLY--MIN-LLLALLTNTTLASLLVLIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWATQTNHLYTMLIMALLLISLLAISLAYEWTQKG--LEWTE-MSMVYMNIMLAFTMSLIGLLMYRSHLMSSLLCLEGMMLSLFVMASLMILSTHFTLASMMPIILLVFAACEAALGLALLVMISNTYGTDYVQNLNLLQCMLKIIFPSIMLIPLTWLSKNSMIWINPTMYSLLISLISL-SLLSQYSDNSTNFS-LLFFSDALSAPLLVLTTWLLPLMLIASQSHLSKEPLTRKKLYITMLILLQVLLIMTFTASELIMFYILFEATLVPTLIIITRWGNQTERLNAGSYFLFYTLAGSLPLLVALVYIQNTVGSLNFLIMQYWNQPLM-DSW-----SNALLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTAMLNP-LTEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATTLMVAHGLTSSMLFCLANTNYERTHSRTMILARGLQTLLPLMAMWWLLASLTNLALPPTINLLGELFVIMASFSWSNITIILMGANMMITALYSLYMLIMTQRGNHTYHINNIKPTYTRENSLMALHMLPLLMLSLNPKIIMGFTY------MNMFTTF-ALLTLLLLTLPIMMS---TSDIYKS-KQYPLYVKNT-IACAFTVSLIPTMMFIHLNQEVIISNWHWITIHTLKLSLSFKMDYFSMMFVPIALFVTWSIVEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVASMAWFLSNLNTWEMQQIFILTQD-CPTAPLMGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNKTAQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKTMPFTTTALIIGSLALTGIPFLTGFYSKDMIIETANTSYTNAWALFITLVATS-LTAIYSTRIIFYALLNQPRFPPLILINENNPLLINSIKRLLIGSIFAGFFISYNIPPMTVPQMTMPSHLKLAALLVTILGFILAMEINTMTKNLK--FTQPSKSFKFSNLLGFFPIIMHRLVPYLNLLMSQKSASVLLDLVWLEAALPKTLALMQVKAST--LVSDQKGLIKLYFLS---FLITL--TLIMILF----------NYPV---- +>Callithrix_jacchus_white-tufted-ear_marmoset +----MNQNLFASFNIPA-ILGIPLVILIIMLPATFITPTN-NLINNRFSSLQQWLIQLMLKQMMITHSTKGRTWSLMLMALITFIALNNLLGLTPYAFTPTTQLSMNLGMAIPLWAATVLMGLRFKTKLALAHFLPQGTPVPLIPMLIIIETISLFIQPVALAVRLTANITAGHLLMHLLGDTTLTLMS-IYLSSSTITIIIIILLITLELGVALIQAYVFTLLVSLYLHDNSMPQLNISPWPMVILSMI-VTLFFITQLKLLNFTFYT-TPTSK-LTKTQKH-KST-W-ELKWTKIYSL-PS-MSQQS---MFMNRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRAELGQPGSLMEDDHVYNVIVTSHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKVHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSVGSFISLTAVILMIFMIWEAFSSKRKVSTIEQLSTNLEWLYGCPPPYHTFEEATYVKT----------MAAPAQLGLQNAASPIMEELIAFHDHALMIIFLISSLVLYIISLMLTTKLTHTSTMNAQEIEMIWTILPAMILIMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYEDLAFDSYIMPTYFLEPGEFRLLEVDNRTTLPMEADIRVLISSQDVLHSWAVPSLGVKTDAIPGRLNQAMVASMRPGLYYGQCSEICGSNHSFMPIVLEFIYFQDFEVWASYLYIV--------MTHQTHAYHMVNPSPWPLTGALSAFLLTSGMIMWFHFYYTTLLTAGLLASTMTMFQWWRDIVREGTYQGHHTSPVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPQTGGHWPPTGIFPLNPMEVPLLNTAVLLASGVTITWAHHSLMEANRKESAQALSMTIALGIYFTYLQMSEYSETSFTISDGIYGSTFFMATGFHGLHVIIGTTFLTTCYFRQQLYHFTSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTSPRKTHPLAKIINESFVDLPTPSNISSWWNFGSLLGTCLIIQITTGLFLAMHYTPDTATAFSSVAHITRDVNYGWMIRYLHANGASMFFICLFLHVGRGLYYGSFLFLKTWNIGTILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFTFHFILPFIIAALATIHLLFLHETGSSNPSGITSEPDKVPFHPYYTTKDILGLTFLLLALTSLTLFTPDLLTDPDNYTLANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAMSILVLMIIPMTHMSKQQSMAFRPITQIMFWTLVADLLTLTWIGGQPVEHPFIAIGQTASIMYFLIIITLIPLSALIENKLL---KW--------MF--------MVNLILLIVPALIAMAFLTLMERKVLGYMQLRKGPNIVGPYGTLQPIADAMKLFTKEPLLPTTSTTTLYLTAPTLALSIALLLWTPLPMPYPLINLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLQSLITTQEHYWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFLATSFNTTMPEMYTINFMTKTLLLTTLFLWIRTAYPRFRYDQLMYLLWKNFLPLTLALCMWYISVPILMSGI-P-PQT--MNP-LAHLIISLTILTGTTITILSSHWFLAWMGLELNMLAIVPILAKNTNPR-STEASTKYFLIQATASMILLMAIFLNNLTSGQW--TINPPHNQTLSTMMLIALVMKMGMAPLHFWLPEVTQGTPLIPAMIVLTWQKLAPLSIMFQIFPSTNTSIILMI-SILSIMAGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYDPNITILTLIIYIFLTISTFMIFYLNSNMTTLSL---SHTWNKLTWMMPMVPLMMMSLGGLPPLTGFSPKWAIMQELTKNNNLIIPLTMAMLTLMNLYFYMRLTYSISMTMFPTSNNTKINW-QLKHTKPMPLL-------PPLMTLSTLMLPLTPLMLTN----MN-LALALTTSILLALLLITITFWLPQLNTYTEKHNPYECGFDPTTSAHLPFSMKFFLIAITFLLFDLEIALLLPLPWATQTNNLMLTINMIFTLLIILALGLAYEWSQKG--LDWTE-MPFIYTNVTLAYFMSLLGLLIYRSHLMSSLLCLEGMMLSLFIMTTLTTLNMHTMLMYMVPITLLVFAACEAAVGLALLILISNLYGLDYVQNLNLLQCMLKIILPTIMMLPTMWLSKTHMMWINTMTCSLLISIFTL-MMLYLPN-NSCNLS-LNFFSDPLTSPLLMLTAWLLPLMILATQQHLHNNSAPRKKLYISMLVFLQISLIMTFSATELILFYILFETTLIPTLIIITRWGYQPERLNAGSYFLFYTLAGSLPLLITLLHYFSSLGSLNILTMTINTKEMM-LSW-----TNNIMWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGSYGMMRVTPMLNP-LTEKMSYPFIVLSLWGMVMTS--SICLRQADLKSLIAYSSVSHMALVILAILIQTPWSLTGAMILMIAHGLTSSLLFCLANSNYERVHSRTMMFTRGLQALFPLLALWWLLANLTNLALPPTINLMGELLTILASFSWSNFTIMFTGFNMLITALYSLHMFTSTQRGPLTYSTSNVKPLFTRENTLMLMHMAPILLLTLNPKTIMCLTP--------MHSSM-ILMTMIPLLTPIIIT---LIKPNNN-LLYPHYVKLA-IIYAFTVSMLSMTMFIFTGQESMISNWHWMTIQTIELSLNFKMDFFSMMFTPVALFVTWSIVEFSMWYMSSDPNINQFLKYLLIFLVTMLILITANNLFQLFIGWEGMGIMSFLLISWWHGRTDANTAALQAILYNRIGDIGFILAMTWFFLYSNSWDFQQMFILDRT-PNSFPLMSLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLIIRFHPMMENNSLIQTLTLSMGAITTLFTAICALTQNDLKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLSAGSIIHSLNNEQDIRKMGGLFKTLPFTSSSLIIGSFALMGMPFLTGFYSKDLIIETANTSYTNAWALTTTLVATS-LTAMYSIRIIFFALAGYPRFTTLILINENNPKLMNPINRLALGSIFAGFLISNCVPPTSHPQVTMPWHLKLTALGVTILGLLVATELSLMTNSMK--LSTPLKTFYFSNMLGFYSATTHRLNPHSSLTMSQNLTSALLDLFWLEKSMPKMTTQTQISAST--TSSTQKGLIKLYFLS---FFIPP--MLALLLTI----------------- +>Cricetulus_kamensis_Tibetan_dwarf_hamster +----MNENLFASFITPT-LMGLPIVIAIIMFPTMMFTSSK-RLVNNRFITLQQWLTKLVTKQMMMIHSPKGRTWSLMLVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPLWAGAVLMGFRHKMKDSLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTT-ISPPTAMITFIILVLLTMLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIMATL-TTLFAIMQLKVSTHEFPL-NPSNK-NMKHTKQ-NNP-W-ETKWTKIYLP-LS-SPLH----MFINRWLFSTNHKDIGTLYIMFGAWAGMVGTALSILIRAELCQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDTWAKAHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSLGSFISLIAVLVMIFMIWEAFASKREVLTVTHTSTNLEWLHGCPPPYHTFEEPAFVKV-K--------MAYPSQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLCFDSYMTPTIDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEVVPLKHFENWSMSMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSHTLLMLGLMTNMLTMYQWWRDIVREGTYQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNNMNQALLITIILGAYFTALQASEYMETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLLVCLIRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKKHPLMKIINHSFIDLPAPSNISSWWNFGSLIGLCLIMQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGIYYGSYTMVETWNIGVVLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDFLGVLLLLMVLAILVLFFPDVLGDPDNYTPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAVLPLLHTSKHRAMTFRPLTQMMYWILVADLFLLTWIGGQPVEYPFVVIGQLGSIIYFATIVIFMPIASMVEDDML---NYTH------MH--------LINTLTLLVPILIAMAFLTLIERKMLGYMQLRKGPNIVGPYGILQPFADAMKLFIKEPLRPLTTSTSLFIIAPTLSLTLAFSLWIPLPLPYPLINMNMGILFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQSLLYTQEPIWLLMTSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTIVFLAPLNNPHNPEMFTINFMMKTLALTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCTWHISTPIFMASI-P-PFT--MNP-ITLLIIYFTILSGPMVTMLSTNFFLMWIGLEMNLLAIIPLMANTNNPR-ATEAATKYFLTQATASLILLLSIALNYKQTGMW--TPQPQTNETIMTLTLISLAIKLGLAPFHSWLPEVTQGITLNTGLLLLTWQKLAPMSIMFQIHELLDFHTLILL-ATISVLIGAWNGLNQTQTRKIMAYSSITHMGWMISIMPYNPPLSMMYLFIYILLTSTTFMILHSHTFSSIKSI---SLLWNKLPAMLPLLALTLLSTGGLPPLTGFLPKWLIITELSKNNNLILATLMAITALMNLFFYTRLIYSTSLTIFPTNNNSKMFS-YQTHTKTYPTL-------SPLIILSTLALPLSPLMV------MN-MITTALINTLLPLALIMVAFWIPQLNIYTEKASPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWTMQLVNLKTAMILALSFLSILALGLAYEWKQKG--LEWTE-MTAAVFNITLAFLFSLMGTLMFRTHLMSTLLCLEGMMLSLFTITAVTALNSHSMIMYPIPIVILVFAACEAAVGLALLAKVSTTYGTDYVQNLNLLQCMLKIIMPSLMLIPLTWLSSDKKMWINITSHSFLINIITL-TTIWQNNNNCSNMS-SLFSMDALSTPLTLLTTWLLPLMLLASQNHIKKETTLNKKLYISMLISLQILLIMTFSANELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALIHIQNTLGTLNIMLMSLITSPLN-QTW-----SNQVLWLACIMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRLCTILSP-STKTMSYPFILLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIAAIMIQTPWSFMGASTLMIAHGLTSSLLFCLANTNYERTHSRTMIMTRGLQTALPLMATFWLLGSLTNLALPPSINLMGELMITISLFSWSYMSITLVGTNILITALYSLYMVITTQRGKPTFHTNNLQPSHTRELTLMTLHITPLMLLTINPKLIMGPTL------MNTTTST-IILIFFLLLTPILIT---MI-YSKP-LDLSSYVTTL-IKYSFMMSLVPLLTLFHSNTEFLITNWHWLTINTMKLTINLKFDYFCIMFLPVALFVTWSITEFSSWYMNSDPNLNRFIKYLLMFLITMIILTSANNMFQLFIGWEGVGIMSFLLIGWWYGRSDANTAALQAILYNRIGDIGFIATMSWLCLTSNSWELQQILML-ND-HSTIPLLGLLIAAMGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTSNNNLIMTTMLCLGSITTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLLKPLPFTASCLTIGSLALTGTPFLTGFYSKDLIIETANTCYTNAWALLITLLATS-LTAAYSLRIIYFALMTKPRFSPLINLNESNPKLINPITRLALGSIFAGFIISQNIPITFTQTMTMPWYLKTMAMMVTMTGLIISIELANLTYNLK--LNKPTPTKYFTTLLGYFTLIIHRSVPSKSLTTSLNTASNTLDLTWLEKAIPKTISTSNLKMSQ--TLSNQKGLIKLYFLS---FLITL--LTLPILLIN---------FHE---- +>Martes_melampus_Japanese_marten +----MNENLFSSFITPT-MMGLPIVIAITMFPSIMFPSPT-RLINNRLISIQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLVVIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTVTAMVTFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-ITLFFMFQLKVAKYNFPE-NPEPK-LMSVSKS-TTP-W-EKKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDIWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVLTVELTSTNIEWLHGCPPPYHTFEEPTYVLS-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLVMWFHFNSMALLTLGMTTNLLTMSQWWRDVVREGTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGLYFTLLQASEYYETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSFIDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYMYPETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIVSALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALFLILVLMMLVLFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILVLAIIPLLHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFAILLILMPTISIIENNLL---KW--------MF--------MINIISLIVPVLLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFVMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNALTTILFFGAFHTPYLPELYSVNFTMKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASI-P-PQT--MKP-PILAIIMSTVISGTIMVLISSHWLTIWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMLGIIINLLLTGQW--TVLNMPNPIASNMMTVALAMKLGLSPFHFWVPEVTQGVPMSSGMILLTWQKIAPLSILYQIAPSMNPNLLTTM-AIMSVLVGGWGGLNQTQLRKILAYSSIAHMGWMIAVTTYNPTLMLLNLTIYIAMTLGTFMLFMLNSSTTTLSL---SHTWNKLPLIASLILMIMLSLGGLPPLSGFVPKWMIIHELTKNDMTIVATFMAMTALLNLYFYMRLTYATALTMFPSTNTMKMKW-QFGSTKNTTLL-------PPLIVISTMLLPLTPMMLTLF---MN-MVLTLLINASLASLLVLIAFWLPQLNIYAEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSVNLKTTLTMALALISLLALSLAYEWTEEG--LEWNK-MSMVYINIFLAFILSFMGLLIYRSHLMSSLLCLEGMMLSLFVMMTVTILTNHLTLASMTPIILLVFAACEAALGLSLLVMISNTYGTDYVQNLNLLQCMLKIIVPTMMLIPLTWLSKPNMIWINTTAYSMLISLIGL-TYLNQFTDNNLNFS-LLFFTDSLSAPLLMLTTWLLPLMLMASQHHLSKETLTRKKLYITMLVMLQLLLIMTFTATELIMFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLWLQSNLGTLNLLVIQYWTQPLL-SSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-LTDSMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQSPWSYMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLVGELFVVMASFSWSNITIILMGINITITALYSLYMLITTQRGKYTHHIKNIKPSFTRENSLMTLHLLPLLLLSLNPKVILGPIY---MKVINLFTSS-ILVTLFMLTLPIMMT---NTSMYTS-KLYPRYVKTT-ISYAFMISLIPTMMFLHLGQDTMISNWHWITIQTMKLSLSFKFDYFSMIFMPVALFVTWSIMEFSIWYMHSDPYINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMAMAWFLTNLNTWDLQQIFMANHE-NLNIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTLQTITLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLVATS-MTAAYSTRIMFFALLGQPRFSPIITINENDPHLINSIKRLLFGSIFAGFLISYNITPTTTPQMTMPHYLKMMALIVTILGFILALELNLMMQSLK--FKYPSGLFKFSNMLGYFPTIIHRLMPKANLLMGQKSASTLLDMTWMEKILPKSISHFQMKSSI--TVSNQKGLIKLYFMS---FMLTL--TLSLLTL----------NFHG---- +>Apodemus_latronum_Sichuan_field_mouse +----MNENLFASFITPS-VMGLPIVITIIMFPSILFPSSE-RLINNRLHSFQHWLIKLIIKQMMLIHTPKGRTWTLMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVLLGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISSM-ATLFILFQLKISSQSFPT-PPSPK-MFSTQKT-KNP-W-ESKWTKIYLP-LS-LPLQ----MLINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLDDMWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLLMIFMIWEAFASKREVLTVSYSSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISTLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSTSMI----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMLFHYNSSMLLSLGLLANTLTMYQWWRDIIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITILLGLYFTMLQASEYFETPFSISDGIYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTRPLIKIINHSFIDLPAPSNISSWWNFGSLLGICLIVQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGMYYGSYTFMETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAVVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGIFMMVVFLMTLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWILVANLFTLTWIGGQPVEHPFVIIGQLASISYFSIILILMPISGIIEDKML---KWNL------MY--------FINILTLLVPILIAMAFLTLVERKILGYMQLRKGPNVVGPYGILQPFADAMKLFIKEPMRPLTTSISLFIIAPTLSLTLALSLWVPLPMPHPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQMLIYTQEHTWLIIPAWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTSIIFLGPIHIIDYPEFYSLNFMTETLILSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIFMASI-P-PYM--MNP-ITLIIIYSTIFLGPIITMLSSNLLLMWVGLEFSLLAITPLLIDKKNPR-STEAATKYFVTQATASMMILLAIVLNYKQLGLW--TFHQQTNFITLNLTLIALSMKLGLAPFHFWLPEVTQGIKLHTGLLLLTWQKIAPLSILFQIYNLLDHTMILLM-ATLSIFMGAWGGLNQTQMRKIMAYSSIAHMGWMLAILPYNPTMTLLNLTIYILLTIPMFILLILNSSTTINSM---SLLWNKTPTILTIIPLILLSLGGLPPLTGFLPKWAIITELLKNNCLILTTLMAMMALLNLFFYTRLIYSSTLTMFPTNNNSKMLT-HHTNYKHNIIL-------PSLTVMSTLILPLSPQLII-----MN-LMIIMFINITLSLILISVAFLLPQMNLYSEKANPYECGFDPSSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTTKITVMMTSAMILVTILSLGLTYEWTQKG--LEWTE-MSSAFINLTLAFMFSLLGTLTFRSHLMSTLLCLEGMMLSLFIMTSMASLNSNAMASMPIPITILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIIIPSFMLLPLTWLSKPKKTWTNVTSYSFLISLISL-STLWQMDENSLNFS-LMFSSDPLSTPLIILTTWLLPLMLMASQNHLKKEKLALQKLYISMLITLQILLIMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALIFIQNSMGTLNFNIMSLTTNTLN-LLW-----SNNILWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGSYGMMRIAIILDP-LTKNMAYPFILLSLWGMIMTS--SICMRQTDLKSLIAYSSVSHMALVIASIMIQTPWSYMGATMLMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMATWWLMASLANLALPPSINLIGELFITMSLFSWSNLSIILMGINIIITGMYSMYMIITTQRGKLTNHMNNLQPSHTRELTLMVLHIIPLILLTVNPKFITGLTM------MNSMTSS-IMAIFLTLLMPVLIS---STNLSKY-INFPSYATLS-IKLSFFMSLLPLMLLFHYNAEYMITTWHWITMNSIELSMSFKMDYFSIMFMSVALFVTWSIMQFSSWYMHSDPHINRFIKYLLLFLITMLILTSANNMFQLFIGWEGVGIMSFLLIGWWFGRADANTAALQAILYNRIGDIGFILTMTWFCLNSNSWELQQIMST-DN-NNLIPLTGLLIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPMTSNNTSILTMMLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGNMMKTMPFTSSCLTIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALLITLIATS-MTAVYSMRIIYFVVMTKPRYPPLISINENNPDLINPIKRLAFGSILAGFFISYNIPPTNISILTMPWYLKTTALLISILGFLLALELNNLTLNLS--TDKKNPYSSFSTSLGYYPSIIHRLIPKKMLNLSFKMSLNLLDLYWLEKSIPKSISTTHSYMST--LLTNQKGLVKLYFLS---FMFSI--LLMTTLYII---------NLEWSQ- +>Martes_zibellina_sable +----MNENLFSSFITPT-MMGLPIVIAITMFPSIMFPSPS-RLINNRLISIQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLVVIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTITAMVTFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-ITLFFMFQLKVAKYNFPE-NPEPK-LMPMSKS-TTP-W-EKKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDIWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVLTVELTSTNIEWLHGCPPPYHTFEEPTYVLS-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEVTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLVMWFHFNSMALLTLGMTTNLLTMFQWWRDVVREGTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGLYFTLLQASEYYEAPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSFIDLPTPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYMYPETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIVSALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALFLILVLMMLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILAIVPLLHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFAILLILMPAVSIIENNLL---KW--------MF--------MINIISLIVPILLAMAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFVMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYTNIIMMNVLTTILFFGAFHTPYLPELYSVNFTMKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASI-P-PQT--MKP-PILAVVMSTVISGTIMVLISSHWLTIWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMLGIIINLLLTGQW--TVLNMPSPIASNMMTAALAMKLGLSPFHFWVPEVTQGVPMSSGMILLTWQKIAPLSILYQIAPSMNPNLLMAM-AIMSVLVGGWGGLNQTQLRKILAYSSIAHMGWMIAVTTYNPTLMLLNLTIYITMTLGTFMLFMLNSSTTTLSL---SHTWNKLPLIASLILMTMLSLGGLPPLSGFIPKWMIIHELTKNDMAIMATFMAMTALLNLYFYMRLTYATALTMFPSTNIMKMKW-QFESTKNTTLL-------PPLIMISTMLLPLTPMVLTLF---MN-MVLTLLINASLASLLVLIAFWLPQLNIYAEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSVNLKTTLTMALALISLLALSLAYEWTEEG--LEWNE-MSMVYINIFLAFILSFMGLLIYRSHLMSSLLCLEGMMLSLFVMMTVTILTNHLTLASMTSIILLVFAACEAALGLSLLVMISNTYGTDYVQNLNLLQCMLKIIVPTMMLIPLTWLSKPSMIWINTTAYSMLISLIGL-TYLNQFTDNNLNFS-LLFFTDSLSAPLLVLTTWLLPLMLMASQHHLSKETLTRKKLYITMLVTLQLLLIMTFTATELIMFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLWLQNNLGTLNLLVIQYWTQPLL-SSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-LTDFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLVGELFVVMASFSWSNITIILMGINITITALYSLYMLITTQRGKYTHHVKNIKPSFTRENSLMSLHLLPLLLLSLNPKVILGPIY---MKVINLFTSS-ILVTLFMLTLPIMMA---NTSMYIS-KLYPRYVKTT-ISYAFMISLIPTMMFLHLGQDTMISNWHWITIQTMKLSLSFKFDYFSMIFVPVALFVTWSIMEFSIWYMHSDPYINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMAMAWFLTNLNTWDLQQIFMTNHE-NLNIPLIGLMLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTLQTITLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLVATS-MTAAYSTRIMFFALLGQPRFSPIITINENDPHLINSIKRLLFGSIFAGFLISYNITPTTTPQMTMPHYLKMMALIVTILGFILALELNLMMQSLK--FKYPSGLFKFSNMLGYFPTIIHRLMPKTNLLMGQKSASTLLDMTWMEKILPKSISHFQMKSSI--AVSNQKGLIKLYFMS---FMLTL--TLSLLTL----------SFHG---- +>Crocidura_attenuata_ +----MNENLFASFATPT-MMGLPIVILIIMFPSIMFPIPN-RLITNRLTAIQQWLIQLTSKQMMIIHNQKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLSN-ISPITALITFIILMMLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISML-LTLFILFQLKISKFMYPN-MPEPK-LLKTFKQ-NTP-W-DFKWTKIYSP-LS-LPQQ----MFMTRWLFSTNHKDIGTLYMVFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMMGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGSINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIAGFVHWFPLFTGYSLSSTWAKIHFAIMFIGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVIIMVFMIWEAFASKREICSVELTTTNIEWMYGCPPPYHTFEEPVYINI-K--------MAYPFQMGLQDATSPIMEELMNFHDHALMIVFLISSLVLYIISAMLTTKLTHTSTMDAQAVETIWTILPAIILVMIALPSLRILYMMDEINNPTLTIKTVGHQWYWSYEYTDYDELNFDSYMIPTSELKPGDLRLLEVDNRAVLPMEMTIRVLVTSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICGSNHSFMPIVLELVPLKTFEKWSTSMI----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSTNLMMMGLLGNMLTMYQWWRDVVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTHELGGYWPPAGIKPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHTIQALLITIALGVYFTLLQAAEYYEAPFTISDGIYGSTFFMFTGFHGFHVIIGFTFLMVCLLRQLNFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MNNIRKTHPLMKIVNSSFIDLPAPSNISSWWNFGSLLGICLIAQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMYLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIVAALAGVHLLFLHETGSNNPSGLNSDTDKIPFHPYYTIKDILGALIMITALTSLVLFSPDMLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSIAILAIIPLLHTAKQRSMMFRPMSQCLFWILVADLLTLTWIGGQPVEHPFVVIGQLASVIYFTLILLIMPITSMIENQLL---KW--------MF--------MINLLILIVPVLLAVAFLTLVERKVLGYMQMRKGPNIVGPYGLLQPIADAVKLFIKEPLRPLTSSVSMFIAAPILALTLALTMWLPLPMPYSLINMNLGILFLLAVSSLSVYSILWSGWSSNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSYSLSNLITTQEYVWLLLTTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFLGALHDPHWPELYSINFTTKALLLTTSFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVAFPIFSSSI-P-PQS--MNP-VIFTILLGTVMLGTSIVMTSSHWFMTWLGFEMNMMAIVPILMKKYSPR-SMEAATKYFLTQATASMILMLAIVINLMYSGQW--TITNMENYTASMLITIALTMKLGLAPFHFWVPEVTQGVPLNSGLILLTWQKIAPLSLLYQTYSSLNTNMLLLM-SLASITIGGWGGLNQTQLRKIMAYSSIAHMGWMMMILTYNPNLSLLNLLIYILMTSSMFMLLIFTSTTSTLSL---SLTWNKTPIITVSSLITLLSLGGLPPLTGFMPKWMIIQELTKNNSVILPTLMAILALLNLFFYMRLTYSTALTMFPTMNNTKLTW-QFQNMNILPMM-------SPLIMISALILPLTPLFILLN---MN-LFLALSTNILLASLLVTIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWASQTNNLNMMAIMALALIFLLAMSLAYEWLHQG--LEWTE-MSLVYMNTALAFSISMLGLLMYRTHLMSSLLCLEGMMLALFTLGAMTILTTHFTLANMLPIVLLVFAACEAAVGLSLLVMVSNTYGADFVQNLNLLQCMLKLIIPSIMMIPLTWLSNKKTIWINTTSYSLLIALMTL-NLFNQPDNNALYFS-TTFYSDSLSTPLLALTTWLLPLMIMASQNHLMNDTEMRKKTYISMLILLQIFLIMTFSATELILFYILFEATLVPTLILITRWGNQTERLNAGLYFLFYTLIGSLPLLVALLYIQNLLGTLNISTTHIWTQNIL-NSW-----SNDFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPVAGSMVLAAVLLKLGSYGMMRITTLLDP-LTELMLFPFLILSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPIMAAWWLLGTLTNLALPPTINLIGELFVILSSFSWSYTTMLLTGLNVVITALYSLYMLIMTQRGKYPQHIQTINPSFTRENALMALHMLPLLLLTFNPKLILGPTF------MNCFLTF-MLTTLLVLLLPVAMT---LLPIYKT-DKYPYYVKMA-ISYAFFISLVPALLFINFGHEAIISSYHWMTLQTIKLSMSFKLDYFSLLFVPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMAWFMTYSNSWELHQIFLTDSN-HNNLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLVENNDLAKTLILSLGALTTLFAAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTSLIIGSLALTGTPFLTGFYSKDLIIETANTSYTNAWALLITLIATT-LTAVYSTRILYYVLLGQPRFNTLTSINENNPLLINPIKRLLIGSIFAGFLISLNLPPMTTPQMTMPTYLKLTALLVTLTGFILALELSMLTQNLK--LSPTQNYYNFSNMLGYFPNTIHRLIPFTSLLMSQTLASMVLDSTWMEMSLPKLISNIQKIYST--AVSSQKGLIKSYFLS---FSVTL--SISLTIF----------NFLA---- +>Apodemus_agrarius_Eurasian_field_mouse +----MNENLFASFITPS-VMGLPIVITIIMFPSILFPSSE-RLISNRLHSFQHWLIKLIIKQMMLIHTPKGRTWTLMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVLLGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISSM-ATLFILFQLKISSQSFPT-PPSPK-TFTAQET-KTP-W-ESKWTKIYLPLLS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLDDMWAKTHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLLMIFMIWEAFASKREVLTVSYSSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISTLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTTDLKPGDLRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYSSTILLSLGLLANTLTMYQWWRDIIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITILLGLYFTMLQASEYFETPFSISDGIYGSTFFMATGFHGLHVIIGTTFLVVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLFKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGMYYGSYAFMETWNIGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGIFIMIMFLMTLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALLPLLHTSKQRSLMFRPITQMLYWILVANLLVLTWIGGQPVEYPFVIIGQLASISYFSIILIFMPISGIIENNML---KWNL------MY--------FINILMLLVPILIAMAFLTLVERKILGYMQLRKGPNVVGPYGVLQPFADAMKLFIKEPMRPLTTSISLFIIAPTLSLTLALSLWIPLPMPHPLINLNLGVLFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQMLIYTQEHTWLILPAWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTSIVFLGPIHMINYPELYSINFMTETLLLSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCTWHISLPIFMASV-P-PYI--MNP-ITIIIIYFTILIGPVITMSSSNLLLMWVGLELSLLAIIPLLINKKNPR-STEAATKYFITQATASMIILLAIILNFKQLGLW--TFQQQTNSLLLNITLIALSMKLGLAPFHFWLPEVTQGIPLHMGLILLTWQKIAPLSILFQFYQLLNPTIIMIL-AISSILIGAWGGLNQTQMRKIMAYSSIAHMGWMLAILPYNPTMTLLNLLIYIILTVPMFLMLMLNASTTINSI---SLLWNKAPTTLVLIPLILLSLGGLPPLTGFLPKWAIITELLKNNCLIITTMMAIMALLNLFFYTRLIYSTSLTMFPTNNNSKMLA-HHLNYKNNIIL-------PSLTIISTLILPLSPQLII-----MN-LMIIMFINTILSLILISVAFWLPQMNLYTEKANPYECGFDPSSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTTNTNMMVISALILVTILSLGLTYEWTQKG--LEWTE-MSSAFINLTLAFMLSLLGTLTFRSHLMSTLLCLEGMMLSLFIMTSLASLNSNSMASMPIPITILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLTWLSKPKKTWMNVTSYSFMISLISL-SILWQTDGSPLNFS-TMFSSDPLSSPLIILTTWLLPLMLMASQNHLKKENFTYQKLYISMLVSLQILLVMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALIFIQNSMGTLNFTMLSLTTNPLN-PLW-----SNNILWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGSYGMMRIAIILDP-LTKYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSFMGATMLMVAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMATCWLVASLANLALPPSINLMGELFITMSLFSWSNFSIILMGVNIIITGMYSMYMIITTQRGKLTSHMNNLQPSHTRELTLMILHIIPLVLLTINPKLITGLTM------MNIITSF-IMAIFLILMSPILIS---STSLFKH-INFPMYATLS-IKLSFFLSLLPLMMLFYHNTEYMITTWHWITINSIELTMSFKMDYFSTMFLSVALFVTWSIMQFSSWYMHSDPHINRFIKYLLLFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWFGRADANTAALQAILYNRIGDIGFILAMTWFCLNMNSWELQQILLT-NN-NNLIPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPMTSNNPSILTMMLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGNMMKTMPFTSSCLTIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALLITLIATS-MTAIYSMRIIYFVVMTKPRFPPLISINENNPNLTNPIKRLAFGSILAGFFITYNIPPTNIQVLTMPWYLKTTALLISILGFLLALELNNLTLNLS--MSKKNSYSSFSTSLGYFPSIIHRIIPNKTLNLSFKTSLSLLDLYWLEKSIPKSTSTMHSYMSK--LLTNQKGLVKLYFMS---FLLSI--LLTTTLFII---------NLE---- +>Coendou_insidiosus_ +----MNENLFTSFIPPT-MIGLPVVTAIILFPNILFPSSD-RLINNRFITFQQWLIKLILKQMMLIHNIKGQSWSLMLISLILFIGSSNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKASLAHFLPQGTPMALTPMLVIIETISLFIQPMALAIRLTANITAGHLLIHLIGGATLALTT-ISPITALIPSTILILLMILELAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTIILSMF-ISLFMLLQLKISTHLHPP-NPQTS-HPTIMKP-KTP-W-ETKWTKTYLP-LL-FHQQ----MLINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNMAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWTPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDPTWAKIHFFTMFIGVNMTFFPQHFLGLSGMPRRYSDYPDAYTLWNTLSSMGSFISLVAVMVMIFMIWEAFASKREISTIELTTTNLEWLHGCPPPYHTFEEPTFIKA----------MAHPHQLGFQDATSPIMEELLYFHDHTLMIMFLISTLVLYIISLMLTTKLTHTSTMDAQEIETIWTILPAIILILIALPSLRILYMMDEINNPSLTIKTMGHQWYWSYEYTDYEELNFDSYMIPTADLKPGELRLLEVDNRVILPMELPVRMLISSEDVLHSWAIPSLGLKSDAIPGRLNQMTLMSSRPGLFYGQCSEICGSNHSFMPIVLEMVPLKTFENWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTTGLAMWFHFNSTMLLSIGLITNMLTMYQWWRDIVRESTYQGHHTTIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGIKPLNPLEVPLLNTSVLLASGVSITWSHHSLMEGNRKQMIQALIITIMLGVYFTLLQISEYLEAPFTISDSIYGSTFFVATGFHGLHVIIGSTFLIVCLLRQLHYHFTSNHHFGFEAAAWYWHFVDVIWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPTPSNISAWWNFGSLLGVCLLLQIITGLFLAMHYTADTSTAFWSVTHICRDVNYGWLIRYLHANGASMFFILLYLHVGRGIYYGSYTYTETWNVGILLLFVTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTTVVEWIWGGYSVDKATLTRFFTFHFIMPFVITALIMIHLLFLHETGSNNPSGLNSDSDKIPFHPYYSIKDILGLILMLLTLLILTLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPLLHSSKQRNMSFRPISQCLLWMLAADLFILTWIGGQPVEYPFILIGQLASVTYFFIILILMPLTSMMENKFL---KW--------MF--------MINLLSLIIPILLAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADALKLFIKEPLRPSTSSIFLFIIAPSLSLTLALSMWIPLPMPYPLINMNMGILFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLLNGSFTLTTLMITQKNIWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGYNVEYAAGCFALFFMAEYMNIIMMNALTTIIFFNTTYTTAFPTAFTMKFVLKTLALTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISMPISTASI-P-PQTT-MNL-IAINLIYFTLFLGTMIVLLSPHWLLMWIGLEMNMLAIIPILMNKTNPR-STEAATKYFLIQATASMMLLMSIMITMMYSGQW--SIFNPQDKMITFFLTLSLMMKLGLAPFHFWVPEVTQGVNLLSGMILLTWQKIAPLSILFQLSPMINQPLILSS-AILSVLLGGWGGLNQTQLRKILAYSSIAHLGWMLAILNYKPSIMLLNLLIYITLTISMFLTLHINNNKTTLSL---SHTWNMSPLLTSTILITLLSLGGLPPLTGFVPKWIIIQEMVKNNNIIMPTLLSMAALLNLYFYMRLVYSSSLTLFPSMNNMKIKW-HFQNTKKIFLL-------SPIIILSTMSLPLTPLMMILD---MN-MMVSIFTNYFLTSILVTVAFWLPQLNTYTEKISPYECGFDPVESARLPFSMKFFLIAITFLLFDLEIALLLPLPWAIQTNNLKSMITVALMLILILALGLAYEWMQKG--LEWTE-MSLIQFNLTVAFVISFLGMMIYRSHMMSSLLCLEGMMLLSFIMGTLIMLNSHYSSSLSLPIILLVFAACEAAVGLALLVMISNTYGMDYVQNLNLLQCMLKIILPSLMLIPVTWLSKNSTVWINSTLHSLIIALLNI-TTLNKLDVVGQNYS-LKFSSDSISSPLLVLTSWLLPLMIIASQHHLNNETEVRKKTYISLLIILQILLIMTFSTTEMIMFYILFEATLIPTLIIITRWGNQTERMKAGLYFLFYTLTGSLPLLVVLIYLYNQLGSLNFLLFNYYSMSMT-STW-----YNNLAWLACTMAFMVKLPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRTLQLLEP-LTKFMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERTHSRTMILTRGLQTMMPLMATWWFLSSLTNLALPPTINLIGELFIIMATFSWCNFTIILTGLNMLITALYSLYMLISTQRGKLPHHIINMMPSFTRENSLMTLHIIPLILLTLNPKIILGNLY------MNLFIST-FTLTLIILMLPIMTS---TTNLHKD-LPYPSYVKSI-TFTSFVLSLIPTLMLFNSNYEMTMYNWNWLTIQNINLNMSIKLDYFCILFTSVALFVTWSIMEFSLWYMYSDPYIDKFFKYLLLFLITMMILISANNLFQLFIGWEGVGIMSFLLIGWWSGRTDANTAALQAILYNRIGDIGLIMSMSWFILYTNTWDFQQLFMMHNE-LSTIPLVGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFSPLIQNNQIILTTSLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGIGQPHLAFLHICMHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLYKILPFTSSSLIIGSLTLTGMPFLTGFYSKDLIIESATTSYTNAWALLLTLLATS-LTAIYSTRIIFYSLLNNPRFFPPSNMNENNMMLINPIKRLAIGSIFAGFIISNNVIPSDIPQMTMPNYLKISALMMTITGFTIAMELNSMTYNLK--TNFPSKTFNFSNSLGYFPTLVHRLLPHTNLTMSQNMATSLIDLIWFEKLVPKSITASLVSAST--YTSNQMGLIKYYFLS---FLTSI--IMAMILIS----------------- +>Artibeus_jamaicensis_Jamaican_fruit-eating_bat +----MNENLFASFITPT-MMGLPIVILIIMFPTIMFPSTN-RLVNNRLVAIQQWLVYLTSKQMLSIHNRKGQTWALMLMSLILFIGCTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTATALITFMILVLLTILEFAVALIQAYVFTLLVSLYLHDNAMPQLDTSTWFITILATI-LTLFIIMQLKISTYYYHS-NPEPK-TTKMTKS-LIP-W-EIKWTKIYSP-LS-LPLR----MFISRWFFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGVGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGRINFIATIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNTTWAKIHFLVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFAAKREVSVAELTTTNLEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFMISSLVLYIISSMLTTHLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPLMTVKTMGHQWYWSYEYTDYADLCFDSYMIPTSDLKAGDLRLLEVDNRVVLPMETTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVSLKYFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSMTLLTLGLLANTLTMYQWWRDIIREGTFQGHHTPVVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLNPLDVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQSLFITICLGLYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIINSSFVDLPAPSSLSSWWNFGSLLGVCLGVQILTGLFLAMHYTSDTATAFNSVTHICRDVNYGWLLRYLHANGASMFFICLYLHVGRGLYYGSYTYSETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFLLPFIVTALVMVHLLFLHETGSNNPTGIPSDPDMIPFHPYYTIKDILGFLVMLTALATLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIVPILHMSKQRSMMFRPLSQCLFWLLVAVLFTLTWIGGQPVEHPYIIIGQTASVLYFLIILFLMPMISLVENYLL---KW--------MY--------LMNLLTTIVPVLLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFIKEPLRPLTSSITMFIIAPILALTLALTMWAPLPMPHPLINMNLSILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSYSLSTLITTQEYMWLIYPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTTTLFLGAYHNPIFPELYTINFAIKTLLLTTTFLWIRASYPRFRYDQLMHILWKNFLPLTLALCMWYVTMPIMTAGI-P-PQT--MNP-IIFSMIMTTVILGTTIVMTSSHWLMVWIGFEMNMLAIIPLLMKTSPPSASTEAATKYFLTQATASMLLMLAVIINLLYSGQW--TITNMMNPTASTILTLAMTMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYMISPNINSDLLLTM-SILSVLIGGWGGLNQTQLAKIMAYSSIAHMGWMSTILIYNPTMTLLNLTIYIMMTLTMFMLLITTTTTTTLSL---AHTWNKTPLITIIIMAVLLSLGGLPPLAGFMPKWMIIQELTKNESIILPTFMAITALLNLYFYMRLMYATSLTMFPTANNIKIKW-HFNNTKRMMLL-------SPLTIMSTMTLPLTPLLTILY---MN-MAITLLTNTFLASLLVMIAFWLPQTNSYTEKVSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLQNMLPMSLMLISLLALSLAYEWLQEG--LEWSE-MSLTYMNMFMAFTISLLGLLMYRSHMMSSLLCLEGMMLSLFVMMTITILNTHLTLASMLPIILLVFAACEAALGLSLLVMVSTTYGMDYVQNLNLLQCMLKIIIPTIMLMPLTWLSNPKMIWINSTAHSLIISLLWI-PLANQFTDNTLNLS-VMFFSDALSTPLLMLTLWLLPLMIIASQSHLANEHPTRKKSYITMLILLQIFLIMTFTATELIMFYILFEATLIPTLVIITRWGNQAERLNAGLYFLFYTLVGSLPLLIALTHIQNLTGTLNFLLIQYWTTLLP-TSW-----NTTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITVLLDP-LTDFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQMLLPLMAAWWLLASLTNLALPPTINLIGELFIVMSMFSWSNLSITLLGLNIILTALYSLYMLIMTQRGKHTQHINNISPSYTRENTLMTMHILPLLLLSISPKIILGTPY------MNLVSSM-MLLSLMILSMPIMTT---MLYPQNH-PNFPHYVKTM-VSYSFFISIIPMMVFIYSNQEMMISNWHWITIQTLKLSLSFKLDFFSILFMPVALFVTWSILEFSMWYMHSDPNINRFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRRDANTAALQAILYNRIGDIGFILSMAWFLTYLNTWELQQIFSLNTT-PNSLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNTMIQTTALCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLGDEQDIRKMGGLYKTMPFTSTAMTVGSLALTGTPFLTGFYSKDLIIEAINTSYTNAWALLMTLIATT-LTAVYSTRIIFFALLGQPRLPSLILINENNPLLLNAIKRLLIGSIFAGFLISKNIPPMTILPMTMPPYLKLTALFVTLTGFILALELNLAALNLK--FKTPSNMFKFSNLLGYFPTIMHRLPPLTSLTMSQKSASLLLDLTWLEIFLPKTISLIQLKTST--LVSNQKGLIKLYFLS---FLITL--LLALSLF----------THHV---- +>Macaca_assamensis_Assam_macaque +----MNENLFTSFSTPT-ILNQPATIPIIPFPTLLILTSK-HPRYNRLATIQQNLTQLALKQMMATHNATGQTWSLMLMSLVTFIAMTNPLGLLPYSFTPTTQLSMNLAMAIPLWAGTVMLGFRFKAKNSLAHLLPQGTPTPLIPMLVVIETMSLLIQPMALAVRLTANITAGHLLMHLVGNAALALST-TNFSMTLLTSMLLVLLTALEIAVALIQAYVFTLLISLYLRNNTMPQLDTSAWFTTIMTTL-PTLYLIMQLKLLNMNHYQ-PPLAK-NSNLQPR-NTR-W-QPKWTKICLP-LS-QPQQS---MLINRWLFSTNHKDIGTLYLLFGAWAGVMGTALSLLIRAELGQPGNLLGNDHIYNVVVTAHAFIMIFFTVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASAVVEAGAGTGWTVYPPLAGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPALSQYQTPLFVWSILITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGMVSHIVAHHSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTCAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSFISLVAVILMIYMIWEAFASKRKVLLIEQPLTSLEWLNGCPPPYHTFEEPAYIKL-SEKGESRTPMAHPVQLSLQDATSPIMEELITFHDHAFMAMSLISFLVLYALLSTLTTKLTNTNITDAQEMETIWTILPAIILILIALPSLRILYLTDEVNDPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHAYHMVKPSPWPLMGALSAFLMTSGLVMWFHFYSTTLLMLGLLTTMLTLYQWWRDIVRESTYQGHHTMPVQKSLRYGMTLFIISEVFFFIGFFWAFYHSSLAPTPCLGGHWPPTGIIPLNPLEVPLLNTSVLLASGVTITWAHHSLMNNDRKQTIQALLITILLGTYFTLLQISEYFEAPFTISDGIYGSTFYITTGFHGLHVIIGSTFLSTCLIRQLLYHFTSSHHFGFEAAAWYWHFVDVVWLLLYVSIYWWGS--MTPMRKSNPIMKMINRSLIDLPTPPNLSMWWNFGSLIAACLILQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWVTRYLHANGASMLFICLFLHVGRGLYYGSYLLLETWSIGIMLLLLTMTTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWIWGGYAIDSPTLTRFFTLHFILPFIIVALTTVHLLFLHETGSNNPCGISSNSDKIAFHPYYTIKDALGLILLLFVLATLTLLSPNLLNDPDNYIPADPLNTPPHIKPEWYFLFAYTILRSVPNKLGGVLALFLSIFILAAIPMLHKSKQQSMMFRPLSQFLFWLLITILLTLTWIGSEPVTQPLITIGQMASMMYFATILILMPLVSLIENNLL---KWT-------MT--------TVNLLLLTASTLTAMAFLTLVERKLLGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPSTSTTTLYIVAPALAFFITLLLWTPLPMPNALINFNLGLLFTLAMLSLIVYSILWSGWASNSNYALIGALRAVAQTISYEVTLTIILLSTLLTSGSFNLNTLITTQEHLWLLLPSWPLAMMWFASTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFLGTFYPIHSPELFTACFTIKTLFLTSLFLWIRAAYPRFRYDQLMYLLWKNFLPLTLALLMWSISTPIAISSI-P-PQT--MNP-LAQPIIYTTMITGTLITMLSSHWFLAWAGLEMNMLAFIPILMKKTNPR-SAEAATKYFLMQSTASMILMMAIISNNLLSGCW--TTTSYIDQPSSLMMTIALAMKLGMTPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQIHPSINTHTLLTL-SILSIAVGSWGGLNQTQLRKILGYSSITHMGWMMMTLVYNPTTTILYLTIYIILTTTMFLTLNLNSSTTTLML---SRTWNKSAHLAPLTAPILMSLGGLPPLTGFLPKWIIIQELTMNNNFLIPSIMTIMTLLNLYFYMRLIYTTSLTLLPTSNNTKMTW-QLENTKPTPLI-------PLLIITSTLLLPISPLMLTTH---MN-LALALTINTLLTLLLMIIMFWLPQLSSYTEKTSPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLSLPWAIQTANLPTMIKSTIAFIIILVLSLAYEWTQKG--LDWVE-MIPTYMNVMLAFAISLLGMLTYRSHLVASLLCLEGMMMSLFIMAALIASNTHSSLINIMPIVLLVFAACETAVGLALLISISNTYGLDYVHNLSLLQCMLKMIIPMATLLPMTWLSKNDTIWINLTMHSLAISLVPL-LFFNQTNTNLLNYS-TYLSSDPLTTPLLTLTIWLLPLMIMASQYHLCNEPPSQKKLFLFMMILLQITLILTFMTTELIMFYILFETTLIPTLIIITKWGSQAKRLNASTYFLFYTLTSSLPLLIMLSHTYNNTGSLNITLLTLTNQKLT-TTW-----SHSFTWLACMMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTPILDP-LTEYMAYPFLMLSLWGMIMTS--LTCLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSFSGATILMIAHGLTSSMYFCLANSNYERTHSRTMLLSRGLQILLPLMTFWWLTASLTNLALPPTINLLGELFVITTSFSWSHITIMLTGLNMLITALYSLHMFTTMQRGTLTHHMINMKPPFTRENMLMFMHLAPIILLSLNPNIILGFTS------MTMYSPI-MMTTLISLTLPIFAA---LINPYKK-RPYPDYVKMT-VMYAFITSLSSTTLFIFLNQETTIWSWHWVMTQTLNLTLSFKLDYFSMMFIPIALFITWSIMEFSLWYMNSDPNINQFFKYLLIFLTAMLILVTANNLFQFLIGWEGVGIMSFLLISWWHARTDANTAAIQAILYNRIGDIGLILAMAWFLLHYNSWDLQQVLALNSN-SSSLPLAGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMETNTLIQNLTLCLGAITTLFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLSNEQDIRKMGGLLKAMPLTSTSLTIGNLALTGMPFLTGFYSKDLIIEATNTSYTNAWALFITLIAIS-LTSAYSTRTILLTLTGQPRFPALTNINENNPALLNPIKRLTMGSMITGFLITNSIPPTSLPQPMMPLYLKLSALCTTTLGFLAALDLTLMTNKLK--MKNPTQMFKFSNMLGYFPTTIHRTIPYQNLLMGQNLALLLLDSAWLEKSMPKMISQAHITASM--TVTTQKGMIKLYSLS---FLIPL--TLALFLMM----------------- +>Papio_anubis_olive_baboon +----MNENLFTSFSAPT-ILGQPATIPIIMFPTLLIPTSK-HLINNQLTTVQQNLIKLILKQMMAPHNAKGQSWSLMLMSLITFITMTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTIITGLRFKTKNFLAHMLPQGTPTPLIPMLVMIETVSLLIQPMALAVRLTANITAGHLLMHLIGNTMLTLST-INLSTTLLTSVLLMLLTILEIAVALIQAYVFTLLVNLYLHNNTMPQLDTSTWFTIIMAML-PTLYLITQLKLLSMNYYQ-PPLTK-NPNLQTH-NTC-W-RPKWTKTYLP-HS-QPQQS---MLINRWLFSTNHKDIGTLYLLFGAWAGVTGMALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTAVEAGAGTGWTVYPPLSGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTMGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTCAKAHFIITFMGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSFISLTATILMIYMIWEAFASKRKVLLTEHPSTSLEWLNGCPPPHHTFEEPAYIKL-SEKGGSRTPMAHPVQLGLQDATSPVMEELITFHDQALMAMFLISFLILYALSSTLTTKLTNTNITDAQEMETIWTILPAVILILIALPSLRILYMTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQLHAYHMVKPSPWPLTGALSAFLLTSGLIMWFHFYSTALLTLGLLTNVLTMYQWWRDIIRESTYQGHHTMPVQKSLRYGMTLFIISEVFFFAGFFWAFYHSSLAPTPRLGCHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMNGNRKQTIQALLITILLGTYFTLLQISEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLLICLIRQLFYHFTPSHHFGFEAAAWYWHFVDVIWLFLYISIYWWGS--MTPMRKSNPIMKMINHSFIDLPTPSNISIWWNFGSLLATCLILQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWTIRYLHANGASMLFICLFLHVGRGLYYGSYLLLKTWNIGIMLLLMTMTTAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTNLVQWVWGGPAIDNPTLMRFFTLHFILPFGIVALTIVHLLFLHETGSNNPCGISSDPDKITFHPYYTTKDILGVALLLLALMTLTLFSPDLLNDPDNYTPADPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALFLSILILAAIPMLHKSKQQSMMFRPLSQFLFWLLATTLLTLTWIGSQPVIQPLTTIGQVASMVYFLTTLVLMPLAAQVENNLL---KWT-------MT--------TMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSSTILYITAPALAFSIALLLWTPLPMPNPLINFNLGLLFILATSSLTVYSILWSGWASNSNYALIGALRAVAQMISYEVTLSIILLSILLTSGSFNLNMLITTQEHLWLILPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYSAGPFALFFMAEYMNIIMMNALTTTIFLGTFYPTHSPELFTTSFTIKTLLLTSLFLWIRAAYPRFRYDQLMHLLWKSFLPLTLALLMWSTSMPIAISSI-P-PQT--MNP-LAQLIIYTTVITGTLITMLSSHWFLAWAGLEMNMLAFIPTLIKKTNAR-STEAATKYFLAQSTASMILMMAIISNNLLSGHWTTTTTNYTNQFPPLAMTIALTMKLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQIHPSINTHILLIL-STLSIAVGSWGGLNQTQLRKILGYSSITHTGWMMMTLTYNPTITTLYLITYITLTTTMFLTLNLNSSTTTLTL---SNTWNKSTHLMPLMTSTLLSLGGLPPLTGFLPKWVTIQELTMNNNFIIPTIMITMTLLNLYFYMRLIYTISLTLLPTSNNTKMTW-QFENTKPTLFI-------PALITISTLLLPISPLILSIP---MN-LMLALTVNTLLTALLTIIMFWLPQLNSYAEKANPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWALQTANLPTMIKTSIMFIIILALSLAYEWTQKG--LDWTE-MTPTHMNITLAFTISLLGMLIYRSHLMASLLCLEGMMMSLFIMTAVMASNAHSPLINIMPIIMLVFAACEAAVGLALLVSISNTYGLDHINNLSLLQCMLKMVIPTTMLLPTTWLSKDSTIWINLTTHSLTISLIPL-LFFNQTDNNLLSHS-IHLSSDPLTTPLLTLTAWLLPLMIMASQYHLHNEPPSQKKLYLSMMIFLQITLILTFMATELIMFYILFETTLIPTLIIITKWGNQAERLNAGSYFLFYTLTGSLPLLIMLIYTYNKTGSLNTTLLTLTDQKLT-TTW-----SHNLTWLACMMAFMTKLPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRFTSILNP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIVASLIQTPWSFSGATILMVAHGLTSSMYFCLANSNYERTHSRIMLLSRGLQILLPLMTFWWFMASLTNLALPPTINLIGELFVIAASFSWSKITMILTGLNMLITALYSLHMFTTMQRGALTHHMTNMKPPFTRENTLMFLHLAPTILLSLNPNTILGLTP--------MYTSI-MLMTLASLALPIFAT---LVNPNKT-HSYPDYVKTT-MMYAFITSLIPTTLYIFSNQETTIWSWHWMMTQTLDLTLSFKLDYFSMMFIPIALFITWSIMEFSLWYMSSDPNINQFFKYLLIFLITMLILITANNLFQLFIGWEGVGIMSFLLISWWHARTDANTAAIQAVLYNRIGDIGLILAMVWFLLHYNSWDFQQMLALNPH-PSPLPLMGLLLAAVGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENDTLTQNLTLCLGAITTLFMAMCALTQNDIKKIVAFSTSSQLG--LMMITIGINQPYLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLIIGNLALTGMPFLTGFYSKDLIIEATSTSYTNAWALSITLIATS-LTSAYSTRTILLTLTGQPRFPTLTNINENNPALLNPIKRLTTASMITGFLITNNIPPTSLPQPTMPLHLKLLALYMTALGFIITLDLTLMTNKLK--VKTPPQAFKFSNMLGYFPTIAHRMIPHQNLLMSQNLALLLLDSMWLEKSMPKMISQTHITAST--TVTAQKSMIKLYFLS---FLIPL--ALTLLLMV----------------- +>Proedromys_liangshanensis_vole +----MNENLFASFITPT-MMGLPIVVLIIMLPPMLMTSSK-RLISNRFHSFQQWLIKTIMKQMMLIHSPKGRTWSLMLVSLIMFIGSTNLLGLLPHTFTPTTQLSTNLGMAIPLWAGAVILGFRHKLKASLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLTS-ISPPTATITFIILALLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITVLSTT-ITLFVLMQLKISLHLFPQ-TPSIK-SVKLMKT-NNP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLDDMWAKTHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLVMVFMIWEAFASKREVLYVEHTSTNLEWLHGCPPPYHTFEEPTFVKV-K--------MAYPLQLGLQDASSPIMEELMNFHDHTLMIVFLISTLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTSDLKPGDLRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKNFEDWSVSMI----------MTHQTHAFHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSITLLSLGLLGNALTMYQWWRDVIREGTYQGHHTPVVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNNMNQALFITIALGIYFTVLQASEYFEAPFSISDGIYGSTFFMATGFHGLHVIIGSTFLTICFMRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTIVRKNHPLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLIIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGVYYGSYNMIETWNMGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVLVHLLFLHETGSNNPIGLNSDADKIPFHPYYTIKDLLGVLILLMAFMILTLFFPDILGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRTLTFRPITQTMYWILVADLLILTWIGGQPVEYPFIIIGQAASVAYFAIIVILMPIAGMIENNIL---NLD------MVY--------FINILTLLVPVLIAMAFLTLVERKILGYMQLRKGPNIVGPYGVLQPFADAMKLFIKEPLRPLTTSTTLFIIAPTLSLSLALSLWIPLPMPHPLVNLNLGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSFSIQSLIHTQEPLWLLIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIILMNALSTIVFMGPFHDPTNPELYTTNFMLKTMMLTTAFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISTPMFMASI-P-PYT--MNP-ITLTIIYSTIIMGPMITMLSPNLFVMWIGLEMNLLALIPLMMNNSNPR-STEAATKYFLTQATASMILLLSILMNFKQLGIW--TFQPETNNTIMTMTFVSLAIKLGLAPFHSWLPEVTQGVKLSVGFILLTWQKVAPLSILFQFHELISPNLLITS-AIISVLIGAWNGLNQTQTRKILAYSSIAHMGWMISILPYNPSLTTLNLIIYIIMTTPLFIIFHAHSFTSISSM---SLMWNKMPMALPMVSLILLSTGGLPPLTGFLPKWAIITELMKNNGLPLATLMAMTALINLFFYTRLIYSTSLTTFPSNNNSKMYM-HQNHTKNNSVL-------SPTMIISTLMLPLSPLLL------MN-MALILMVNTTLAMVLISVAFWLPHLNMYTEKANPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQYPNMNTPTIIAFTLITILALGLAYEWTQKG--LEWTE-MTPAVINITLAFTFSLLGTLMFRSHLMSTLLCLEGMMLSLFIMATITPLNTHSMIMFPIPITILVFAACEAAVGLALLAKISNTYGSDMVHNLNLLQCMLKIIFPSLMLLPLTWFSNHKKVWINVTTYSLLINLISI-NLLWQNSENSMNFS-IMFSADPLSAPLLVLTTWLLPLMLLASQNHIKKEPDHSKKLYISLLVTLQALLIMTFSANELIMFYVLFEATLIPTLVIITRWGNQTERLNAGIYFLFYTLVGSIPLLIALFFFQNSTGTLNFPLMTLNTLPMD-QTW-----SNNILWLACMMAFMVKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRVSMTLDP-MTKYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAIMIQTPWSFMGATALMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQTVFPLMATWWIMASLANLALPPTINLIGELMITVSLFSWSSPSIVLLGSNILITSIYSIYMIVTTQRGKLTNHMNNLQPSHTRESTLMTLHILPLILLTINPKLILGPTL------MNTITSS-ILLILTLLLLPMILS---FTNMVKH-NNFPNYVTSC-IKYAFFISLIPLFYFFNSGAELVITNWHWVSIGPIKLSMSLKFDFFSIIFLPVALYVTWSIMEFSTWYMHSEPNLPRFIKYLLTFLITMIILTTANNLFQLFIGWKGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLMLAMAWFCTKTNSWELQQIFIL-ND-SNTIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLISNNNTILTAMLCLGATTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCAGSIIHSLNDEQDIRKMGGLAKPMPFTSSCLTIGSLALTGAPFLTGFYSKDLIIEAANTCYTNAWALLITLVATS-MTAVYSMRIIYFVLMTKPRFPSMIIINENNTMLTNPIKRLALGSILAGFFISYNIPPSTVQVMTMPWYLKTTALMITITGFAIALELNNLTNNFT--PTKPSITNSFSTSLGYFPTIIHRLLPLKTLSTSFKTALTMLDLTWLEKAIPKATSTIHTLTSS--SLSNQKGMVKLYFLS---FLITL--TCIPMMFLT---------------- +>Papio_hamadryas_hamadryas_baboon +----MNENLFTSFSAPT-ILGQPATIPIIMFPTLLIPTSK-HLINNQLTTVQQNLIKLTLKQMMAPHNAKGQSWSLMLMSLITFITMTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTIITGLRFKTKNFLAHMLPQGTPTPLIPMLVMIETISLLIQPMALAVRLTANITAGHLLMHLIGNTMLTLST-INLSTTLLTSVLLMLLTILEIAVALIQAYVFTLLVNLYLHNNTMPQLDTSTWFTIIMAML-PTLYLITQLKLLSMNYYQ-PPLTK-NPNLQTH-NTC-W-RPKWTKTYLP-HS-QPQQS---MLINRWLFSTNHKDIGTLYLLFGAWAGVTGMALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTAVEAGAGTGWTVYPPLSGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTMGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTCAKAHFIITFMGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSFISLTATILMIYMIWEAFASKRKVLLTEHPSTSLEWLNGCPPPHHTFEEPAYIKL----------MAHPVQLGLQDATSPVMEELITFLDQALMAMFLISFLILYALSSTLTTKLTNTNITDAQEMETIWTILPAVILILIALPSLRILYMTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDFRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQLHAYHMVKPSPWPLTGALSAFLLTSGLIMWFHFYSTALLTLGLLTNVLTMYQWWRDIIRESTYQGHHTTPVQKSLRYGMTLFIISEVFFFAGFFWAFYHSSLAPTPRLGCHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMNGNRKQTIQALLITILLGTYFTLVQISEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLLICLIRQLFYHFTPSHHFGFEAAAWYWHFVDVIWLFLYISIYWWGS--MTPMRKSNPIMKMINHSFIDLPTPSNISIWWNFGSLLATCLILQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWTIRYLHANGASMLFICLFLHVGRGLYYGSYLLLKTWNIGIMLLLMTMTTAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTNLVQWVWGGPAIDNPTLMRFFTLHFILPFGIVALTIVHLLFLHETGSNNPCGISSDPDKITFHPYYTTKDILGVAPLLLALMTLTLFSPDLLNDPDNYTPADPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALFLSILILAAIPMLHKSKQQSMMFRPLSQFLFWLLATTLLTLTWIGSQPVIQPLTTIGQVASMVYFLTTLVLMPLAAQVENNLL---KWT-------MT--------TMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSSTILYITAPALAFSIALLLWTPLPMPNPLINFNLGLLFILATSSLTVYSILWSGWASNSNYALIGALRAVAQMISYEVTLSIILLSILLTSGSFNLNMLITTQEHLWLILPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYSAGPFALFFMAEYMNIIMMNALTTTIFLGTFYPTHSPELFTTSFTIKTLLLTSLFLWIRAAYPRFRYDQLMHLLWKSFLPLTLALLMWSTSMPIAISSI-P-PQT--MNP-LAQLIIYTTVITGTLITMLSSHWFLAWAGLEMNMLAFIPTLIKKTNAR-STEAATKYFLAQSTASMILMMAIISNNLLSGHW-TTTTNYTNQFPPLAMTIALTMKLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQIHPSINTHILLIL-STLSIAVGSWGGLNQTQLRKILGYSSITHTGWMMMTLTYNPTITTLYLITYITLTTTMFLTLNLNSSTTTLTL---SNTWNKSTHLMPLMTSTLLSLGGLPPLTGFLPKWVTIQELTMNNNFIIPTIMITMTLLNLYFYMRLIYTISLTLLPTSNNTKMTW-QFENTKPTLFI-------PALITISTLLLPISPLILSIP---MN-LMLALTVNTLLTALLTIIMFWLPQLNSYAEKANPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWALQTANLPTMIKTSIMFITILALSLAYEWTQKG--LDWT--MTPTHMNITLAFTISLLGMLIYRSHLMASLLCLEGMMMSLFIMTAVMASNAHSPLINIMPIIMLVFAACEAAVGLALLVSISNTYGLDHINNLSLLQCMLKMVIPTTMLLPTTWLSKDSTIWINLTTHSLTISLIPL-LFFNQTDNNLLSHS-IHLSSDPLTTPLLTLTAWLLPLMIMASQYHLHNEPPSQKKLYLSMMIFLQITLILTFMATELIMFYILFETTLIPTLIIITKWGNQAERLNAGSYFLFYTLTGSLPLLIMLIYTYNKTGSLNTTLLTLTDQKLT-TTW-----SHNLTWLACMMAFMTKLPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRFTSILNP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIVASLIQTPWSFSGATILMVAHGLTSSMYFCLANSNYERTHSRIMLLSRGLQILLPLMTFWWFMASLTNLALPPTINLIGELFVIAASFSWSKITMVLTGLNMLITALYSLHMFTTMQRGALTHHMTNMKPPFTRENTLMFLHLAPTILLSLNPNTILGLTP------MAMYTSI-MLMTLASLALPIFAT---LVNPNKT-HSYPNYVKTT-MMYAFITSLIPTTLYIFSNQETTIWSWHWMMTQTLDLTLSFKLDYFSMMFIPIALFITWSIMEFSLWYMSSDPNINQFFKYLLIFLITMLILITANNLFQLFIGWEGVGIMSFLLISWWHARTDANTAAIQAVLYNRIGDIGLILAMVWFLLHYNSWDFQQMLALNPH-PSPLPLMGLLLAAVGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENDTLTQNLTLCLGAITTLFMAMCALTQNDIKKIVAFSTSSQLG--LMMITIGINQPYLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLIIGNLALTGIPFLTGFYSKDLIIEATSTSYTNAWALSITLIATS-LTSAYSTRTILLTLTGQPRFPTLTNINENNPALLNPIKRLTTASMITGFLITNNIPPTSLPQPTMPLHLKLLALYMTALGFIITLDLTLMTNKLK--VKTPPQTFKFSNMLGYFPTIAHRMIPHQNLLMSQNLALLLLDSMWLEKSMPKMISQTHITAST--TVTAQKSMIKLYFLS---FLIPL--ALALLLMV----------------- +>Papio_cynocephalus_Yellow_baboon +----MNENLFTSFSAPT-ILGQPATIPIIMFPTLLIPTSK-HLINNQLTTVQQNLIKLTLKQMMAPHNAKGQSWSLMLMSLITFITMTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTIITGLRFKTKNSLAHMLPQGTPTPLIPMLVMIETISLLIQPTALAVRLTANITAGHLLMHLIGNTMLTLST-INLSTTLLTSVLLMLLTILEIAVALIQAYVFTLLVNLYLHNNTMPQLDTSTWFTIIMAML-PTLYLITQLKLLNMNYYQ-PPLTK-NPNLQAH-NTC-W-RPKWTKTYLP-HS-QPQQS---MLINRWLFSTNHKDIGTLYLLFGAWAGVTGMALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTVVEAGAGTGWTVYPPLSGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTMGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTCAKAHFIITFMGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSFISLTATILMIYMIWEAFASKRKVLLTEHSSTSLEWLNGCPPPHHTFEEPAYIKL-SEKGGSRTPMAHPVQLGLQDATSPVMEELITFHDQALMAMFLISFLILYALSSTLTTKLTNTNITDAQEMETIWTILPAVILILIALPSLRILYMTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQLHAYHMVKPSPWPLTGALSAFLLTSGLIMWFHFYSTALLTLGLLTNVLTMYQWWRVIIRESTYQGHHTTPVQKSLRYGMTLFIISEVFFFAGFFWAFYHSSLAPTPRLGCHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMNGNRKQTIQALLITILLGTYFTLLQISEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLLICLIRQLFYHFTPSHHFGFEAAAWYWHFVDVIWLFLYISIYWWGS--MTPMRKSNPIMKMINHSFIDLPTPPNISIWWNFGSLLATCLILQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWTIRYLHANGASMLFICLFLHVGRGLYYGSYLLLKTWNIGIMLLLMTMTTAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTNLVQWVWGGPAIDNPTLMRFFTLHFILPFGIVALTIVHLLFLHETGSNNPCGISSDPDKITFHPYYTTKDILGVALLLLALMTLTLFSPDLLNDPDNYTPADPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALFLSILILAAIPMLHKSKQQSMMFRPLSQFLFWLLATTLLTLTWVGSQPVIQPLTTIGQAASMVYFLTILVLMPLAAQVENNLL---KWT-------MT--------TMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSSTILYITAPALAFSIALLLWTPLPMPNPLINFNLGLLFILATSSLTVYSILWSGWASNSNYALIGALRAVAQMISYEVTLSIILLSILLTSGSFNLNMLITTQEHLWLILPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYSAGPFALFFMAEYMNIIMMNALTTTIFLGTFYPTHSPELFTTSFTIKTLLLTSLFLWIRAAYPRFRYDQLMHLLWKSFLPLTLALLMWSTSMPIAISSI-P-PQT--MNP-LAQLIIYTTVITGTLITMLSSHWFLTWAGLEMNMLAFIPTLIKKTNAR-STEAATKYFLAQSTASMILMMAIISNNLLSGHW-TTTTNYTNQFPPLAMTIALTMKLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQIHPSINTHILLIL-STLSIAVGSWGGLNQTQLRKILGYSSITHTGWMMMTLTYNPTITTLYLITYITLTTTMFLTLNLNSSTTTLTL---SNTWNKSTHLMPLMTSTLLSLGGLPPLTGFLPKWATIQELTMNNNFIIPTIMITMTLLNLYFYMRLIYTISLTLLPTSNNTKMTW-QFENTKPTLLI-------PALTTISTLLLPISPLILSIP---MN-LMLALTVNTLLTALLTIIMFWLPQLNSYAEKANPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWALQTANLPTMIKTSIMLIIILTLSLAYEWTQKG--LDWTE-MTPIHMNITLAFTISLLGMLIYRSHLMASLLCLEGMMMSLFIMTAVMASNAHSPLINIMPIIMLVFAACEAAVGLALLISISNTYGLDHINNLSLLQCMLKMVIPTTMLLPTTWLSKDSTIWINLTTHSLTISLIPL-LFFNQTDNNLLSHS-IHLSSDPLTTPLLTLTAWLLPLMIMASQYHLHNEPPSQKKLYLSMMIFLQITLILTFMATELIMFYILFETTLIPTLIIITKWGNQAERLNAGSYFLFYTLTGSLPLLIMLIYTYNKTGSLNTTLLTLTDQKLT-TTW-----SHNLTWLACMMAFMTKLPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRFTSILNP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIVASLIQTPWSFSGATILMIAHGLTSSMYFCLANSNYERTHSRIMLLSRGLQILLPLMTFWWFTASLTNLALPPTINLIGELFVIAASFSWSKITMILTGLNMLITALYSLHMFTTMQRGTLTHHMTNMKPPFTRENTLMFLHLAPTILLSLNPNTILGLTP------MTMYTSI-MLMTLASLALPIFAT---FVNPNKT-HSYPNYVKTT-MMYAFITSLIPTTLYIFSNQETTIWSWHWMMTQTLDLTLSFKLDYFSMMFIPIALFITWSIMEFSLWYMSSDPNINQFFKYLLIFLITMLILITANNLFQLFIGWEGVGIMSFLLISWWHARTDANTAAIQAVLYNRIGDIGLILAMVWFLLHYNSWDFQQMLALNPH-PSPLPLMGLLLAAVGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENDTLTQNLTLCLGAITTLFMAMCALTQNDIKKIVAFSTSSQLG--LMMITIGINQPYLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLIIGNLALTGMPFLTGFYSKDLIIEATSTSYTNAWALSITLIATS-LTSAYSTRTILLTLTGQPRFPTLTNINENNPALLNPIKRLTTASMITGFLITNNIPPTSLPQPTMPLHLKLLALYMTALGFIITLDLILMTNKLK--VKTPPQTFKFSNMLGYFPTIAHRMIPHQNLLMSQNLALLLLDSMWLEKSMPKMISQTHITAST--TVTAQKSMIKLYFLS---FLIPL--ALTLLLMV----------------- +>Cavia_porcellus_domestic_guinea_pig +----MNENLFASFITPT-LMGLPIVTIIIMFPIILFPSPT-HLINNRLITIQQWLVKLVLKQMMSMHNIKGRTWSLMLTSLILFIGSTNLLGLLPHSFTPTTQLSMNLAMAIPLWAATVILGFRYKMKASLAHFLPQGTPGPLIPMLILIETISLFIQPIALAVRLTANITAGHLLMHLIGGATLVLTT-ISTPTALITFIILLLLTMLEIAVAMIQAYVFTLLVSLYLHDNSMPQLDTSTWFTVILSMI-ISLFMLLQLKISSHSFYL-DPKTM-SLKTTKH-NLP-W-ENKWTKTYLP-LS-LHLH----MLINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLSSSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFTGYTLNDTWAKVHFFVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTLWNTVSSMGSFISLTAVMVMVFMIWEAFASKREVMDIELTSVNLEWLHGCPPPYHTFEEPAYIKS----------MAYPYELGFQDASSPIMEELLHFHDHTLMIVFLISTLVLYLITIMLTTKLTHTSTMDAQEIETIWTVLPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEELNFDSYMVPTMDLKPGELRLLEVDNRVVLPMETPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLMSSRPGLYYGQCSEICGSNHSFMPIVLEMVPLKNFEIWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGMIMWFHFNSKTLLMLSFLANALTMYQWWRDIVREGTYQGHHTTVVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGFWPPAGINPLNPMEVPLLNTSVLLASGVSITWSHHSLMEGSRKQMIQALTITIALGIYFTLLQASEYYEASFSISDGVYGSTFFVATGFHGLHVIIGSSFLAVCLLRQLLYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTHLRKSHPLIKIINHSLIDLPAPSSISTWWNFGSLLGICLGLQIITGLFLAMHYTADTSTAFSSVAHICRDVNYGWLIRYLHANGASMFFIFLYLHIGRGIYYGSYTFLETWNIGIALLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMVHLLFLHETGSNNPSGLNSDSDKIPFHPYYTIKDILGALFMMLALLCLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALFPMLHTSKQRSMAFRPLSQCLLWLLAANLLILTWIGGQPVEHPYITIGQLASISYFFIILILFPLTSLLENKML---KW--------MF--------MINLLLLIIPILLAMAFLTLTERKILGYMQLRKGPNIVGPYGILQPIADALKLFIKEPLRPSTSSVFLFVLAPTLALTLALSMWIPIPMPYPLINMNLGVLFILATSSLAVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIIFLSVLLLNGSFSLVGLMETQKNTWLLLSTWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIIMMNALTTIIFFNAMPTINSPEIFTMNFMLKTLALTVLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMLSGI-P-PQTT-MNF-LSKPIIYSTLIMGTLITLFSSHWLLMWIGLEMSMLAMIPIMMPNFTPR-STEAATKYFLTQASASMLLLFSIMLTMTYSGQW--AIMQHQNQMASFMLTISLMMKLGLAPFHFWVPEVLQGIPLLPGLILLTWQKMAPLAILFQSFSTINKPLMLTS-AILSVLLGGWGGLNQTQLRKIMAYSSIAHMGWMAAILIYNPSIMMMNYIIYTFLTTSMFSMFIMYNNTTTSSL---SHTWNISPLLTAMMMITLLSLGGLPPLTGFAPKWLIIQEMMKNNNIILPTAMAMVTLLNLYFYMRLVYSTSLTLFPSKNNTKIKW-LYQHTKHIPLL-------PVTLVLSAFLLPLTPMTNILF---MN-IAISLLTNCSLTLLLITIAFWLPQMNTYTEKTSPYECGFDPTESARLPFSMKFFLIAITFLLFDLEIALLLPLPWASQISNLNLMLLVALMLILVLSLGLAYEWTQKG--LEWAE-MSSIHFNLIMAFTISFLGTMLYRSHMMSTLLCLEGMMLSTFIFGSLVMLNSHYLLSFAIPIIMLVFAACEAAVGLALLVMISNTYGIDYVQNLNLLQCMLKIILPTVMLIPTIWLSSKPTMWINTTSHSLLITLIAL-TTINKLDTTGQNYS-ANFSSDSLSSPLLILTTWLLPLMIIASQHHLNNETEMRKKLYLTLMVLLQISLIMTFSATEMIMFYILFETTLIPTLIIITRWGNQAERMKAGLYFLFYTLVGSLPLLIALVYLQNLLGTMNFLLFDYTNKIPP-TTW-----SANMMWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRILQLLEP-LTSYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVIVAIMIQTPLSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTVLPLMMVWWLLSSLTNLALPPTINLVGELYIILSTFSWSNLTIILTGLNMLITALYTLYMFITTQRGKLPYHITDMTPSFTRENSLMVLHIIPLILLSLNPKIILGNMY------MNMSITF-FVLTLSTLLLPILTS---MTNIHNK-LPFPMYVKSL-TSLSFLLSLIPTLSYLNSNHEAVVTTWNWLTIQSLNLCMSFKLDYFSILFMSVALFVTWSIMEFSLWYMYSDPNIDKFFKYLLLFLITMMVLVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFVLSMAWFTMYFNSWDLQQLFSMQNK-ISLLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFSPLMQDNYLFQTCILCTGAITTLFAAICAITQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKVMPMTSSCLTIGSLALTGMPFLTGFYSKDLIIEAATTSYTNAWALTLTLIATS-LTAAYSVRILFFTMIETPRFHSSASINENNPMLINSISRLAAGSIFAGFFISNSIPPTTMYQMTMPTYLKTSALLVTIIGLTIAMELASMAYNLK--LNYSTKTFNFSNMLGYHSVIMHRSVPYKNLLMSQNLSSVLLDLIWLEKVAPKGISSMQVSAAI--SSSTQTGLVKLYFLS---FLISI--TLAIFMVI----------------- +>Orcinus_orca_killer_whale +----MNKNLFTSFMIPV-VLGIPITTLIIMFPTMLFPTPN-RLTNNRVITIQQWLTKLTSKQLMITHGLKGQTWSLMLTSLFLFIASTNLLGMLPHSFTPTTQLSMNLGMAIPLWAGTIFIGFRNKTKMSLAHLLPLGTPAFLIPMLVMIETISLFIQPLALAVRLTANITASHLLLHLIGSATLALMG-INLPTALITFIILTLLVILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWPLTILSMI-FTLFALLQLKISKHFYSP-SPKPA-DTKLQKQ-QTP-W-NCMWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGXSLLIRAELGQPGTLIGDDQLYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFFLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTATLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMISIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWTKIQFMIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLISTNLEWLNGCPPPYHTFKEPVYVNL-KHS------MAYPFQLGLQDAASPVMEELLQFHDHALMIIFLISSLVLYIITLMLTTKLTHTSTMNAQEVETIWTILPAAILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTPDLKPGELRLLEVDNRMVLPLQMTIRMLVSSEDVLHSWAIPSLGLKTDAIPGRLNQTTLTSTRPGLFYGQCSEVCGSNHSFMPIVLELVPLESFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSMILLTLSFLTNTLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMVLFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPLELPLLNTSVLLASGVSITWAHHSLMEGDRKHVLQALLITIMLGLYFTLLQVSEYYEAPFTISDGIYGSTFFVTTGFHGLHVIIGSTFLIICFMRQMMFHFTSGHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKILNNAFIDLPTPSNISSWWNFGSLLGLCLITQILTGLLLAMHYTPDTSTAFSSVAHICRDVNYGWFIRYLHANGASMFFICLYAHIGRGLYYGSYMFQETWNVGVLLLLAVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALTAVHLLFLHETGSNNPTGIPSNMDMIPFHPYHTIKDTLGALLLILTLLALTLFAPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILIFIPMLQTSKQRSMMFRPFSQLLFWTLIADLLTLTWIGGQPVEHPYIMVGQLASILYFLLILVLMPTISLIENKLL---KW--------MF--------MINILTLTLPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFMIAPVLALTLALTMWTPLPMPYPLINMNLGVLFMLAMSSLTVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLNTTQEKLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGAFHNPYTPELCTTNLITKSLLLTMSFLWIRASYPRFRYDQLMQLLWKNFLPLTLALCMWHISLPIMTASI-P-PQT--MNP-FVSITLLTTLILSTTIVTISSHWFFAWIGLEMNMMAIIPIMMKKPNPR-ATEASTKYFLTQATASSLLMLAIIINLMHSSQW--TIMKLFHPTASTLMTMALAIKLGLSPFHFWVPEVTQGIPLSTGLILLTWQKLAPISILYQISPSINLHLMTTM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHVGWMTTILPYNPTFTLLNLSIYIMMTFTMFMLLIQNSTTTTLML---SQTWNTMPIMTTLTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPTLMAITALLNLYFYMRLTYSTALTLFPSINNTKMKW-QFYPTKQMTLL-------PTAIVLSTMLLPLTPTLFILL---MN-LLSTLLTNTTLALLLMLIAFWLPQLNAYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEITLLLPLPWAIQTNNLTTMLLMALFLISLLATSLAYEWTQKG--LEWNK-MSLVHINILIAFAVSLTGLLMHRSHLMSALLCLEGMMLSLFILATLTILSTHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIIPTVMLMPLTWLSKSNFIWINTTAHSLLISFTSL-LLLNQFNDNSLNYS-LTFFSDPLSAPLLMLTMWLLPLMLMASQSHLLKEPLARKKLYITMLVTLQTLLIMTFTAMELIMFYITFEATLIPTLILITRWGNQTERLNAGLYFLFYTLMGSLPLLVALTYLQNTVGSLNFLLLQYWTQPLS-TSW-----SNTFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTEHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALIIAAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQIFFPLMTTWWLLACLTNLALPPTINLIGELLVIMSTFSWSNLTIILMGVNIVITALYSLHMLIMTQRGKHTHHINNLTPTFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSS-TLLTLLMLITPVMVS---STDFYKN-NKYQHYVKNM-TLLAFITSLVPMTMFIHTNQEMLISNWHWTTIHTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPHINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLHNTNTWSLQQIFMLSQN-PPTLPLLGLTLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKLIQTMMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMTTLGLNQPHLTFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALIIGCFALTGMPFLTGFYSKDLIIETATSSYTNAWALLLTLTATS-MTAIYSTRIIFFTLLEQPRFPPLMNINETDPMLINPIKRLLIGSIFAGFILSNSMPPMNTPLMTMPLHLKLTALTVTTLGFVLAFEINTYSKNLK--YPYSSDSIKFSTLLGYFPTIMHRLSPHLVLTMSQKLATSLLDLTWMETALPKTTALIQLKAST--LTSNQKGLIKLYFLS---FLITM--TLSMLLF----------NYPE---- +>Lynx_rufus_bobcat +----MNENLFASFTTPT-MMGLPIVILIIMFPSILFPSPN-RLINNRLISLQQWLVQLTSKQMLAIHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLALAN-ISTSVALITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIMSMI-MTLFIVFQLKISKYLYPL-NPEPK-STTTPNQ-LSP-W-EKKWTKIYSP-LS-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDTWAKIHFTIMFMGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFMVWEAFASKREVAMVELTTTNLEWLHGCPPPYHTFEEPTYVLL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMGTRPGLYYGQCSEICGSNHSFMPIVLELVPLAYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHYNSTLLLALGMTTNLLTMYQWWRDIIRESTFQGHHTSIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGIYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLKYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPTPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGMYYGSYTFSETWNIGIMLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGITSNSDKIPFHPYYTIKDILGLLVLILALMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLAIIPILHTSKQRGMMFRPLGQCLFWLLVADLLTLTWIGGQPVEYPFITIGQLASILYFLTLLILMPISGIIENRLL---KW--------MF--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSMLMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLATLITTQEYMWLIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAYHNPYMPELHTINFTVKTLFLTTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIITASI-P-PQT--MKP-PIFIIIMSTVISGTMIVVSTSHWLMVWIGFEMNLLAITPILMKKYNPR-AMEAATKYFLTQATASMILMMGIIINLLHSGQW--TVSKDLNPMASIMMTTALAMKLGLAPFHFWVPEVTQGVPMSSGLILLTWQKIAPLSILYQISPTINPNLLLTM-SIMSVMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMMYNPTVMILNLTIYIIMTLTTFMLFMHNSTTTTSAL---SQSWNKTPLITSLILVLMMSLGGLPPLSGFIPKWMIIQELTKNEMIMMPTLLAMTALLNLYFYMRLTYTTALTMFPSNNNMKMKW-RFECTKKTILL-------PPLIVMSTMLLPLTPMLSILD---MN-VMLALLTNTLLSALLVLIAFWLPQLNIYAEKVSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLSTMLIMALLLISLLAASLAYEWTQKG--LEWTE-MSMVYINIFLAFAMSLMGLLMYRSHLMSSLLCLEGMMLSLFVMMTVAILNNHFTLASMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTAMLMPTTWLSKPNMIWINSTAYSLLISLISL-SYLNQLGDNSLNFS-LLFFSDSLSAPLLVLTTWLLPLMLMASQSHLSKETLVRKKLYITMLILLQLLLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNTMGTLNFLIIQYWAKPIS-ITW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-ATNQMAYPFMMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTILPLMAAWWLLASLANLALPPTINLIGELFVVMASFSWSNMTIILMGTNIIITALYSLYMLITTQRGKYTHHIKNINPSFTRENALMTLHLLPLLLLSLNPKIVLGPIY------MNLFTSF-ILTAMFILLLPIIMS---NTQLYKN-SLYPHYVKTT-ISYAFTISMIPTMMFISSGQEAVISNWHWLSIQTLKLSLSFKMDYFSIVFIPVALFVTWSIMEFSMWYMYSDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMAMAWFLTNLNAWDFQQIFITQHE-NLNVPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQNKTMQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKPMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-LTAAYSTRILFFVLLGQPRFNALNLINENNAHLINSIKRLLIGSIFAGYLISYNIPPTTIPQMTMPHYLKLTALAVTITGFILALELNLAAKNLK--FKYPSNLFKFSNLLGYFPIVMHRLPPKMSLTMSQKSASMLLDMIWLENVLPKSVSYFQMKMST--TVSNQKGLIKLYFLS---FMITL--TLGLLLL----------NFHE---- +>Stenella_attenuata_bridled_dolphin +----MNENLFASFMIPI-VLGIPITTLIIMFPTMLFPTPN-RLINNRMVAIQQWLTKLTSKQLMITHSPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNLGMAIPLWAGTVFIGFRNKTKMSLAHLLPLGTPTFLIPMLVMIETISLFIQPLALAVRLTANITAGHLLLHLIGSATLALMS-ISLFTALITFIILTLLIILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMI-FTLFALLQLKISKHFYSP-SPKPV-DTKLQKQ-QTP-W-NHTWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQLYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWTKIQFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFEEPVYVNL-KYS------MAYPFQLGLQDAASPVMEELLQFHDHALMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTVLPAVILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMVPTSDLKPGELRLLEVDNRMVLPMQMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSMILLTLSFLTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIMLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKILNDAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWFIRYLHANGASMFFICLYAHIGRGLYYGSYMFQETWNIGVLLLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALSAVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGALLLILTLLALTLFTPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLIFIPMLQTSKQRSMMFRPFSQLLFWTLIADLLTLTWIGGQPVEHPYIIVGQLASILYFLLILVLMPTAGLIENKLL---KW--------MF--------MINILTLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFMIAPVLALALALTMWAPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLNTTQEKLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGAFHNPYMPELCTTNLIVKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMTASI-P-PQT--MNP-FVSITLLTTLILSTTIVTISSHWLFAWIGLEMNMMAIIPIMMKKPNPR-ATEASAKYFLTQATASSLLMLAIIINLMHSSQW--TIMKLFDPTASILMTMALAIKLGLSPFHFWVPEVTQGIPLSTGLILLTWQKLAPISILYQISPSINLHLMITM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILLYNPTLTLLNLLIYIVMTFTMFMLLIQNSTTTTLLL---SQTWNTMPVMTTFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPTLMAITALLNLYFYMRLTYSTALTLFPSINNMKMKW-QFYPVKQMTLL-------PTAIVLSTMLLPLTPALFILL---MN-LLLTLLTNTTLALLLMLIAFWLPQLNTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLTTMLLMALFLISLLAASLAYEWTQKG--LEWDK-MSLVHINILVAFTVSLTGLLMYRSHLMSALLCLEGMVLSLFILATLTILNTHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKSNFIWINTTTHSLLISFTSL-LLLNQFNDNSLNYS-LMFFSDPLSAPLLMLTMWLLPLMLMASQSHLLKEPLARKKLYITMLVMLQVLLIMTFTAMELIMFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALTYLQNTVGSLNFLLLQYWAQPLS-TSW-----SNTFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTEHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFFPLMATWWLLACLTNIALPPTINLIGELLVIMSTFSWSNLTIILMGVNIVITALYSLYMLIMTQRGKHTHHINNLTPTFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSS-TLLTLLMLMAPIMAS---NTDFYKN-NKYQHYVKNM-TLLAFITSLIPMTMFIHTNQEMLISNWHWITIHTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYVNQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLHNTNAWDLQQIFTLNQN-PPILPLVGVTLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLIQTMMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALIIGCFALTGMPFLTGFYSKDLIIEAATSSYTNAWALLLTLIATS-MTAIYSTRIIFFTLLEEPRFPPLTNINENNPLLINPIKRLLIGSIFAGFILSNSMPPMNIPLMTMPLYLKLTALTVTILGFILAFEINNYSKNLK--YPYSSDSTKFSTLLGYFPTIMHRLPPHLVLTMSQKFATSLLDLTWTETILPKTTALIQLKAST--LTSNQKGLIKLYFLS---FLITL--ILSMLLF----------NYPE---- +>Macropus_robustus_wallaroo +----MNENLFATFITPT-ILGITTLPIIMLFPCLLLTSPK-RWLPNRIQILQVWLIRLITKQMLTIHNKQGRSWALMLMSLILFIASTNLLGLLPYSFTPTTQLSMNIGMAIPLWLATVLMGFRNKPKISLAHFLPQGTPTPLVPMLIIIETISLFIQPVALAVRLTANITAGHLLIHLIGSATLALCS-ISVTVSTITFIILFLLTILELAVAMIQAYVFTLLVSLYLHDNSMPQLDTSTWLLTITLMI-LALFCIYQSKMINQTMISIPPQDKKVIK-PTT-QLP-W-ESKWTKIYLP-HS-SPLLS---MFITRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALTQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDLWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIISSIGSFISLTAVILMVFIIWEAFASKREVATVELTTTNIEWLYGCPPPYHTFEQPVFVKV----------MPYPMQLGFQDATSPIMEELTYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETIWTILPAVILVLIALPSLRILYMMDEIYNPYLTIKAMGHQWYWSYEYTDYEDLTFDSYMIPTQELTPGQLRLLEVDNRVVLPMELPIRVLISSEDVIHAWTVPSLGLKADAIPGRLNQATLTSTRPGVYYGQCSEICGSNHSFMPIVLEMTTLKYFEKWSSMMQ----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSFLLVIIGLTCMLLTMYQWWRDIVREGTFQGHHTPVVQKGLRYGMVLFIVSEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQMIQALSITILLGIYFTILQASEYYESSFTISDGVYGSTFFVATGFHGLHVIIGTTFLIVCLLRQFNFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKSHPLIKIVNHSFIDLPAPSNISAWWNFGSLLGACLIIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNLHANGASMFFMCLFLHVGRGIYYGSYLYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVLVHLLFLHETGSNNPSGINPDSDKIPFHPYYTIKDALGLMLMLFILLMLALFSPDMLGDPDNFSPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLIIPLLHTSKQRSLMFRPISQTLFWILTANLITLTWIGGQPVEQPFIIIGQLASISYFLLIIILMPLAGLFENYMLE-PKW--------MF--------VINLLLYIVPILLAVAFLTLVERKVLGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSVSMFIIAPILALTLALTIWTPLPMPHALIDLNLGLLFILSLSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKNLIITQENMWLIVATWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIMAMNAMTAILFLGSSLNHNLSHLNTLSFMLKTLFLTFMFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWFISIPIALSCI-P-PQI--MSP-YVFLIISISLFLGTSLTLFSNHWLMAWMGLEINTLAIIPMMTYPNHPR-STEAAIKYFLTQATASMLVMFAIIHNAWMTNQW--TLFQMANSAASVLMTLALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKIAPTALLYQISPTLNMKVLITL-AFLSTMLGGWGGLNQTHLRKILAYSSIAHMGWMTIVMMINPSLALLNLLIYIIATLTLFLMLNFASVTKIKSL---TNLWNKSAPMTTAILLTLLSLGGLPPLTGFMPKWLILQELVSNNNIIMATLMALSALLNLFFYMRIIYASTLTMFPTTNNSKIQW-PYPQTKTINII-------PTLTIISSLLLPLTPLLTTLMY-MIN-LIITLIINTALSTIIVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWAMQLPTPNLTLILAYCLIILLTAGLAYEWIQKG--LEWSE-MMSISLNLTMAFLLALAGVLIYRSHLMSTLLCLEGMMLSLFILMALLISHFHMFSASMAPLILLVFSACEAGVGLALLVKTSNNYGNDYVQNLNLLQCMLKILVPTIMLIPLTWYSKKQWVWINPTAHSFLISIASL-TLLYHSTDLGYSYS-SSFYMDSLSGPLLVLSCWLLPLMMIASQNHLMKEPLNRKKTFLTTLIILQTSLIMAFSSSELIMFYIMFEATLIPTLIIITRWGNQNERLNAGLYFLFYTLTGSLPLLVALLYLHSKIGTLHILTLIMNPKPME-LSM-----PNSILWYACTVAFMVKMPMYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITILTQP-ITAHVYYPFIVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMGLVIVAALMQSTLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQLILPLMCTWWLLASLANLALPPTINLLGELAVIISSFSWSHFSIILLGANTVITALYSLHMLITSQRGKFTHHLYPMKPSFTREHILMMLHMIPLLIISMNPKFILGITY------MNFIFNSSMLLAITMLTFPLIYN---LAFPDKT-NNFPLYCKTT-VKMAFFTSLPALLLFINTGQESTITNWQWFSIESLNMTMSFKLDYFSIIFIPIALYVTWSILEFSLWYMHSDPYIHRFFKYLITFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWFGRTDANTAALQAVLYNRIGDIGFMLAMAWLMINNSSWDLQHIFMTNMD---TLALMGLVIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIKDNPTILTTTLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLLNIMPITSSALITGSLALMGTPFLAGFYSKDSIIEAMNTSHTNTWALIITLIATA-LTAIYSLRIIYFALLNQPRFLPMSPINENHPNLTNPIIRLAMGSIFAGFILTMNIPPTSMVPLTMPPISKLSALIVTITGLLIAMELNSATNKSL--MMSYIHTHNFSNMLGYFTYLFHRMYPLANLYLGQHIATMLIDLNWYEKTGPKGQANLHSTISS-YISSTQKGLIKTYFLS---FIISI--PMIMLII------------------ +>Stenella_coeruleoalba_striped_dolphin +----MNENLFASFMIPV-MLGIPITTLIIMFPTMLFPTPN-RLINNRMVAIQQWLTKLTSKQLMITHSPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNLGMAIPLWAGTVFIGFRNKTKMSLAHLLPLGTPTFLIPMLVMIETISLFIQPMALAVRLTANITAGHLLLHLIGSATLALMN-ISLFTALITFIILTLLIILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMI-FTLFALLQLKISKHFYPP-SPKPM-DTKLQKQ-QTP-W-NHTWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQLYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYHNLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWTKIQFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFEEPVYVNL-KYS------MAYPFQLGLQDAASPVMEELLQFHDHALMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTVLPAVILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMVLPMQMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSMILLTLSFLTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIMLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKILNDAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWFIRYLHANGASMFFICLYAHIGRGLYYGSYMFQETWNIGVLLLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAAVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGALLLILTLLALTLFTPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLIFIPMLQTSKQRSMMFRPFSQLLFWTLIADLLTLTWIGGQPVEHPYIIVGQLASILYFLLILVLMPTAGLIENKLL---KW--------MF--------MINILTLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFMIAPVLALALALTMWAPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLNTTQEKLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGAFHDPYMPELCTTNLIVKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTAGI-P-PQT--MNP-FVSITLLTTLILSTTIVTISSHWLFAWIGLEMNMMAIIPIMMKKPNPR-ATEASAKYFLTQATASSLLMLAIIINLMHSSQW--TIMKLFDPTASILMTMALAIKLGLSPFHFWVPEVTQGIPLSTGLILLTWQKLAPISILYQISPSINLHLMITM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILLYNPALTLLNLLIYIVMTFTMFMLLIQNSTTTTLLL---SQTWNTMPIMTTFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPTLMAITALLNLYFYMRLTYSTALTLFPSTNNMKMKW-QFYPTKQMTLL-------PTAIVLSTMLLPLTPAFFILL---MN-LLLTLLTNTTLALLLMLVAFWLPQLNTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLTTMLLMALFLISLLAASLAYEWTQKG--LEWDK-MSLVHINILIAFTVSLTGLLMYRSHLMSALLCLEGMVLSLFILATLTILNTHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKSNFIWINTTTHSLLISFTSL-LLLNQFNDNSLNYS-LMFFSDPLSAPLLMLTMWLLPLMLMASQSHLLKEPLARKKLYITMLVMLQVLLIMTFTAMELIMFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALTYLQNTVGSLNFLLLQYWAQPLS-TSW-----SNTFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTEHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFFPLMATWWLLACLTNLALPPTINLIGELLVIMSTFSWSNLTIILMGVNIVITALYSLYMLIMTQRGKHTHHINNLTPTFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSS-TLLMLLMLMAPIMAS---STDFYKN-NKYQHYVKNM-TLFAFITSLIPMTMFIHTNQEMLISNWHWITIHTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFILSMAWFLHNTNAWDLQQIFTLNQN-PPILPLMGITLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQTMMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALIIGCFALTGMPFLTGFYSKDLIIEAATSSYTNAWALLLTLIATS-MTAIYSTRIIFFTLLEQPRFPPLMNINENNPMLINPIKRLLIGSIFTGFILSNSMPPMNIPLMTMPLYLKLTALMVTILGFILAFEINNYSKNLK--YPYSSDSTKFSTLLGYFPTIMHRLPPHLVLTMSQKFATSLLDLTWTETILPKTTALIQLKAST--LTSNQKGLIKLYFLS---FLITM--ILSMLLF----------NYPE---- +>Tursiops_truncatus_bottlenosed_dolphin +----MNENLFASFMIPV-VLGIPITTLIIMFPTMLFPTPN-RLINNRMVAIQQWLTKLTSKQLMITHSPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNLGMAIPLWAGTVFIGFRNKTKMSLAHLLPLGTPTFLIPMLVMIETISLFIQPLALAVRLTANITAGHLLLHLIGSATLALMS-INLFTALITFIILTLLIILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMI-FTLFALLQLKISKHFYSP-SPKPV-DTKLQKQ-QTP-W-NHTWTKIYLP-LS---------MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQLYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWTKIQFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFEEPVYVNL-KHS------MAYPFQLGLQDAASPVMEELLQFHDHALMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTVLPAVILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMVLPMQMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSMILLTLSFLTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIMLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKILNDAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWFIRYLHANGASMFFICLYAHIGRGLYYGSYMFQETWNIGVLLLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAAVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGALLLILTLLALTLFTPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLIFIPMLQTSKQRSMMFRPFSQLLFWTLIADLLTLTWIGGQPVEHPYIIVGQLASILYFLLILVLMPMAGLIENKLL---KW--------MF--------MINILMLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFMIAPVLALALALTMWAPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLNTTQEKLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGAFHDPYMPELCTTNLIVKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTAGI-P-PQT--MNP-FVSITLLTTLILSTTIVTISSHWLFAWIGLEMNMMAIIPIMMKKPNPR-ATEASAKYFLTQATASSLLMLAIIINLMHSSQW--TIMKLFDPTASILMTMALAIKLGLSPFHFWVPEVTQGVPLSTGLILLTWQKLAPISILYQISPSINLPLMITM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILLYNPALTLLNLLIYIVMTFTMFMLLIQNSTTTTLLL---SQTWNTTPVMTTFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPTLMAITALLNLYFYMRLTYSTALTLFPSTNNMKMKW-QFYPTKRMTLL-------PTAIVLSTMLLPLTPAFFILL---MN-LLLTLLTNTTLALLLMLIAFWLPQLNTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLTTMLLMALFLISLLAASLAYEWTQKG--LEWDK-MSLVHINILVAFTVSLTGLLMYRSHLMSALLCLEGMVLSLFILAALTILNTHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKSNFIWINTTTHSLLISFTSL-LLLNQFNDNSLNYS-LMFFSDPLSAPLLMLTMWLLPLMLMASQSHLLKEPLARKKLYITMLVMLQVLLIMTFTAMELIMFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALTYLQNTVGSLNFLLLQYWAQPLS-TSW-----SNTFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTEHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFFPLMATWWLLACLTNLALPPTINLIGELLVIMSTFSWSNLTIILMGMNIVITALYSLYMLIMTQRGKHTHHINNLTPTFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSS-TLLTLLMLMAPIMAS---STDFYKN-NKYQHYVKNM-TLFAFITSLIPMTMFIHTNQEMLVSNWHWITIHTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLHNTNAWDLQQIFMLNQN-PPILPLVGITLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQTTMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALIIGCFALTGMPFLTGFYSKDLIIEAATSSYTNAWALLLTLIATS-MTAIYSTRIIFFTLLEQPRFPPLMNINENNPMLINPIKRLLIGSIFAGFILSNSMPPMNIPLMTMPLYLKLTALMVTILGFILAFEINNYSKNLK--YPYSSDSTKFSTLLGYFPTIMHRLSPHLILTMSQKFATSLLDLTWTETILPKTTALIQLKAST--LTSNQKGLIKLYFLS---FLITM--ILSMLLF----------NYPE---- +>Crocodylus_acutus_American_crocodile +MTLATNLNLFDQFLVPK-LFGMSLLIPAMLLTTLLIYNPQDRWLSNPLTTLQAWLIAKTTKQIMTPVNKPGHKWSLMLISLLTMLILNNLLGLLPYTFTPTTQLSMNMALALPLWLATVLIGLRNKPTSSLAHLLPEGTPTPLIPILILIETISLLIRPIALAVRLTANLTAGHLLMHLISTAVLNLVT-TSTLLAGLTLSILALLMLLEIAVAMIQAYVFTLLLSLYLQENVMPQLNPEPWLMILSTTW-LVFVITLQPKIASMKFMN-NPSNP----NQKT-TKT-W-PWPQI-----------------MNINRWLFSTNHKDIGTLYFIFGAWAGMVGTAMSLLIRTELSQPGPFMGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLLPLMIGAPDMAFPRMNNMSFWLLPPSFTLLLFSAFIETGAGTGWTVYPPLAGNLAHAGPSVDLTIFSLHLAGVSSILGAINFITTAINMKPPAMSQQQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVITFYSSKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATIYGGVVKWQAPMLWALGFIFLFTVGGLTGIVLANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMSGFTHWFPLFTGFTLHSTWTKIQFMIMFTGVNLTFFPQHFLGLSGMPRRYSDYPDAYAFWNMISSIGSLISMVSVILLTFIVWEAFSSKRKVQVPEMASTNVEWLNNCPPSYHTYEEPVFVQV-QPKLT----MANPMHLGLQDAMSPLMEELLYFHDHTLMIIFLISMFVLYTISVLLLTNLYHTNATDVQEMEMIWTILPALILITIALPSLRTLYLMDETTNPCLTIKVIGHQWYWTYEYTDFSQLEFDSYMLPTQDLPQGHFRLLEVDHRMVVPTNSSTRTLITAEDVLHSWAVPSLGIKMDAVPGRLNQTSLTSPNPGVFYGQCSEICGANHSFMPIVVEAVPMQHFQSWLKTNS----------MTHQMHLFHMVNPSPWPILGAMAAMMLTAGLVLWFHCNLSLILLMGLISTLLIMFQWWRDVVRESTYLGHHTPPVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLAPTPELGGQWPPTGITTLDPFEVPLLNTAVLLASGVTVTWAHHSLMEANRTPAIHALTLTIILGLYFTALQAMEYYEAPFTIADSSYGSTFFVATGFHGLHVIIGSTFLMTCLYRQIMHHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS-MAHQLRKSHPLLKLVNHSLIDLPTPSNISYWWNFGSLLGLTLLIQLASGILLMMHFLADDSLAFMSVAYTSREVWYGWLIRSLHANGASLFFLCIFLHIGRGVYYGSYLNENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYVGDTIVTWTWGGPSVNSATLTRFTTLHFLIPFILMAAVITHLIFLHERGSFNPLGLASNADKIPFHPYFSAKDAMGMAMATVLLMTLTFYFPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLTGVLAMFASILVLLLLPALHTSKRQSMSLRPLSQLLFWTLIADFFVLTWIGGQPVQDPYTLIGQMASFTYFFIILILLPLAGMIENLLIKPLRYRPYGP---MS---FLT--ITPILIYIISVLIAVAFLTGLERKIIGYMQLRKGPNIVGPLGLLQPFADGLKLIIKELTLPLLATPALFILSPAVALVLSLIMWTPLPVPFSIANLNLGMLFLLAMSSLAVYSLLWSGWASNSKYALMGALRAVAQTISYEVTLAIIVLSVILLSGGFSLHALAVTQEPIYLALTTWPLLMMWYTSTLAETNRAPFDLTEGESELVSGFNVEYSAGLFTLFFLAEYANILLMNILTTILFLNTTMNLPTQTLFTTALMSKSILLTIGFLWIRASYPRFRYDQLMHLLWKNFLPATLAICLWHSSFPVSTFGL-PVA-----MP-IFQPVILTTLTITTLIFLSSTHLVLMWVALELSTLVVLPLIANKSHPR-SIEASTKYFLTQATASALIIFAWTLNYITTGGG--QITEMTNQTLTTITALALFIKIGLVPFHFWVPETIQGMTPTASIFLLTWQKLGPLIMLYLMSPLINLGVLSAV-SILSATIAGWLGLNQTQIRKLVAFSSIAQMAWTLVIIKYAPPLTILAFYLYSITISTTLLTLEKLSTTSINSL---LLSFQKAPITSLLLMVSLLSLSGLPPLAGFLPKWLTIDQLVAEGAIWVAFTMLMASLLSLFFYLRLWYNSASTLPPNTANTQRLW-RKPVQQTNLTINSMAMATLTLILAATMMKAITKQEAY-----MNLLTAFMLATAT-AVAVITLNLLMSEMTPDPEKLSPYECGFDPLGSARLPLSIRFFMVAILFLLFDLEIAILLPLAWALQLTSLTKSVTWAIIIFLLMFAGLTYEWLQGG--LEWAE-TSPTNLLFTLSFMIFTIGFTFRHTHLLSALLCLEGMMLSVFLLMATWSLNSNIS-SFILPLTVLTLSACEAGIGLALLIASARTHNTANLKNLNLLQCMLKIIVPTMMLIPSTCLTATKNTWLLPTAYSTVIIILGM-LILN-PGDILVNTSGLLLGSDQISTPLLMLSCWLLPLMFMASQSSMSHDPTQQKRLFITALALLQLALMLVFMALDLMLFYTAFEATLIPTLMVIARWGSQTERLGAGLYFLLYTITSSMPLLIALLWVYNMKGTTSITLLQSLPQMTL-MFW-----TSTLLWTSLMLAFLVKIPIYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGLLRVTNLLTEQTTSSYILP-LTVALWGALMTG--MICLRQTDLKSLIAYSSVSHMGLMTSSILTRNQLAPSGSMTMMVAHGLTSSMLFCLANITYERTHSRTLLLTQGVQLTTPVMTSWWLLACLTNMALPPTINFIGELTLMVSLFDWADITIFLTGLSAFITSIYTLHMFSSTQQGTLPNHIITMSPTQTREHLLMMLHSAPSIALIITPQLMYYQ----MTQPSALIIML-FLLPLAVLTLPMLIPSSKLTSPLKT--------KVLTAKLAFLTSLIPLTYLIYNDLTITTYETQWSTISTTTIRISFTLDIYSTFFLPILLFVVWSIMEFTVQYMESDMKISTFFNQLTTFTLMMMILVTAENLFQFFIGWEGVGIMSFMLINWWSFRSNSNKAAMQAVIYNRLADIGLVIALAWMSINNLSLSIKGM-QTTPD-MALIPALGLLLAAAGKSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSNETATTACLLLGAFTSMLAASCALTQNDLKKIIAYSTTSQLG--LMMTSIGLKQPELAFMHISTHAFFKAMLFLCAGTIIHSLDNEQDIRKMGGLKKALPTTSSCLIVGSLALSGMPFMAGFYSKDAIIESINTSNVNSLSLAMTLMATV-FTTLYSLRMIYYVALSTPRILPLSAISET-PQTTNPILRLAIGSITAGLMISTTILPPNIPQLTMPTSAKLAALSILILGLLVGSILITVADQLPSPTKGTQNPLIYKIIHSYF--ILHHTLSSLILQISQKLSTHLMDQTHYEALGPKTMTYLQMLMAK-LLTNIHKARINPYLKI---IILST--TLISLFYSTSMNAEPLDVAHELEP- +>Caretta_caretta_Loggerhead_turtle +----MNLTFFDQFMSPQ-ILGIPLTTLALLMPSTLFPTQNTRWLTNRLSTLQSWTINSFTKQLMLPINKTGHQWSIILTSLMTMLLMINLLGLLPYTFTPTTQLSLNMGLAIPMWLATVLTGLRNQPTTSLGHLLPEGTPILLTPILIIIETISLFIRPLALGVRLTANLTAGHLLIQLTSTAVLTLLP-MMPTLSLLTMVILLLLTILELAVAMIQAYVFVLLLSLYLQENTMPQLNPNPWLMILLSAW-LIYTIILQPKISSYLPTN-NPTNK----NNKTNTNP-W-TWPWT-----------------MFLTRWFFSTNHKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGTLLGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTAINMKSPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYAGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGMIKWDAAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFTHWFPLFTGYSLHQTWTKVHFGVMFTGVNMTFFPQHFLGLAGMPRRYSDYPDAYTLWNSISSIGSLISMVAVVMMMFIIWEAFSSKRKVSTVELTTTNVEWLHGCPPPYHTYEEPAHVQT-QE-------MAHPLQLGFQDAMSPIMEELLHFHDHTLMIVFLISTLVLYIITLMMTTKLTYTNTMNAQEVEMIWTILPAIVLITIALPSLRVLYLMDEINNPHLTIKAMGHQWYWTYEYTDYENLEFDSYMIPTQDLPNGHFRLLEVDHRMVMPMESPIRMLISAEDVLHSWAVPSLGVKTDAIPGRLNQATFIITRPGVFFGQCSEICGANHSFMPIVVESVPLSHFEDWSSLMLS---------MAHQMHAYHMVDPSPWPLTGAAAALLMTSGLATWFHYNSTLLMTLGLLTMLLTMFQWWRDIIREGTFQGHHTPPVQKGLRYGMILFITSEVFFFIGFFWAFYHSSLAPTPELGGCWPPTGITPLNPFEVPLLNTAVLLASGVTITWAHHSLMEMNRNQTTQALTITILLGLYFTALQAMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLIVCLLRQIKFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS-MATNLRKTHPMMKIINNSLIDLPSPSNISAWWNFGSLLATCLALQIITGIFLAMHYSPDISMAFSSITHITRDVQYGWLIRNMHANGASLFFICIYLHIGRGIYYGSYLYKETWNTGIILLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNATLTRFFTLHFLLPFAITGLTMVHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLTFLLTLTLFSPYLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLLLMPTLHTSKQRTASFRPLTQILFWSLVADLLVLTWIGGQPVEDPFITIGQMASSLYFLILLLLMPTAGMIENKML---KLK-------MK--TLLSN-LMSPLMYMVPILIAVAFFTLIERKILGYMQLRKGPNIVGPYGLLQPVADGVKLFIKEPIYPSNSSIMLFTMSPMLALLLALSIWLPLPLPFPLADLNLGLLFLISMSSFMVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLTLFSGGFNMQTFMTTQEPMYLMFSSWPLMMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILMMNTLTTILFLNSTYTNNP-ELFSVLLMSKVMLLSGGFLWIRASYPRFRYDQLMHLLWKNFLPITLALCLWHTSMPITFSGL-P-PMP--MNP-YANTIIISSLIMGPLLTISSNHWILAWTGLEISTLAIIPLIAKQHHPR-ATEAATKYFLTQATASTLILFSSIINAWTLGQW--DITQMSNNTSCTILTTALAIKLGLAPFHFWLPEVMQGTSTMTALILATWQKLAPLSLLTMTAQSLNTPLLLML-GLTSALIGGWNGLNQTQLRKIMAFSSIAHLGWMATILTLSPKLMLLTFYTYTIMTSTMFLMMKLLKTNKISMM---MTSWTKLPTMNTLMMLTLMSLAGMPPLTGFMPKWLILQELTKQHMLIMATMMAMLSLLTLFFYLRISYYATITLPPNSTNYSQQW-RHKMNQKPPYL-------ALLTTLSTIMLPIMPTLLTIP---MNVTTSIITMASILSMILMMLNYQLTLTKPDNEKLSPYECGFDPLESARLPFSIRFFLSAILFLLFDLEIALLLPLPWATQLPSPTSTLTWTIIILLLLTLGLIYEWIQGG--LEWAE-MTPLHFSYHSAFIISIMGLSLHRTHLISTLLCLESMMLSLFIALAMWPTQLQTPSLMITPMLMLSFSACEAGMGLSLLVASSRTHGSDQLQNLNLLQCMLKILLPTIMLLPTITLCKPKQLWPSTLIHSLTIATLSL-QWFKPSMEPTMNFSNSYLGMDQTSAPLLILSCWLTPMMILASQNHLATEPTSRKRTFTFTIISLQISLMLAFSTMELIMFFIAFETTLIPTLMIITRWGNQMERLNAGTYFLFYTLIGSLPLLIALLSLNTENGSSSMYTMQLNQPIMP-NSW-----THTTWWFALLMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMMLNP-LSKTLSYPFMVLALWGVIMTS--SICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWAYTGAITLMIAHGLTSSMLFCLANTNYERTHSRTLLLARNMQLLLPLMSLWWLLASLTNMALPPTINLMGELTIITSLFNWSNITILMTGLGTLITATYTLYMLSTTQWGETPSYIKTIPPTHTREHLLMSLHILPMILLMTKPELIWGSFY------MTTLMNSTFLLALITLMFPLTTT-------YPK-TWTPLKTKTA-VKMAFFITLIPLIAFIYTDIESVITNLHWSTTSTFTMNMSFKLDKYSIMFVPIALYVTWSILEFTHWYMATDPYITKFFKYLLIFLVAMMILVTANNMFQFFIGWEGVGIMSFLLIGWWSGRTEANSSALQAIIYNRIGDIGLILSMAWLSMNLNTWELQQIFTHTNL-TPLLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVIAGIFLLIRMHPILTTNNTALSTCLCLGAITTLFTAFCALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPQLAFLHISMHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLHKSLPITSSCLTIGSMALTGMPFMTGFYSKDIIIETMNTSYMNAWALLLTLTATS-FTAIYSFRILIFVQTGHPRYPSTLLLNENNPTIINPITRLAMGSIVAGLLISLNITPLKTPPTTMPTYIKITALTVTILGLLLALELITMVNKTQ----KPSNTHNFSNSLAYFNTLMHRSLPMVNLKFSQNIATHLIDQSWYENVGPKGLSKSQITPIT-TSSASQKGLIKIYMTS---FILSM--TLLLLIT------------------ +>Cricetulus_griseus_Chinese_hamster +----MNENLFSSFITPT-LMGLPIIILIIMFPLVIMTSSK-RLVNNRFHTFQQWLIKLITKQMMAIHSPKGRTWSLMLASLIIFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPLWAGAVILGFRHKMKDSLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTS-ISLPTAMITFIILIMLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTVLASS-ITLFILMQLKISFHDLHK-KPSNK-YLKLFKP-TNP-W-EQKWTKIYSP-LS-LPQP----MFINRWLFSTNHKDIGTLYLMFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAVTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDTWAKAHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLIAVLIMIFMIWEAFASKREVMTVDHTSTNLEWLHGCPPPYHTFEEPTFVKV-K--------MAYPSQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPIITVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGDLRLLEVDNRMVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEMVPMKCFETWSVSMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSFTILYIGLLTNMLTMYQWWRDIVREGTYQGHHTPIVQKGLRYGMILFIVSEIFFFAGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNSMNQALLITIILGVYFTALQTSEYLETSFSISDGIYGSTFFMATGFHGLHVIIGTSFLTVCLLRQFKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTIMRKKHPLMKIINHAFIDLPAPSNISSWWNFGSLIGLCLITQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGVYYGSYTMVETWNVGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGLDSDADKIPFHPYYTIKDLLGAFMLLIALMTLVLFFPDILGDPDNYTPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILATLPLLHTSKLRTMIFRPITQTMYWLLVADLLLLTWIGGQPVEYPFVIIGQIASIMYFSIIVIFMPIASMIEDSVL---KFT-------MH--------MINILMLLVPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFIKEPLRPLATSTTLFILAPTLSLTLAFSLWVPIPMPHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQTLITTQEHMWLLLASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTIVFLGPYNNPTHPEMFTTNFMLKTLMLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCTWYISMPVFMASI-P-PYT--MNP-FTLLIIYFTIFSGPMVTMLSSSFFLMWIGLEMNLLAMIPLMINKSNPR-SMEASTKYFITQATASMIFLMSVILNYKQMGLW--TFQPQTNNLTTTLIFISLSIKLGLSPFHAWLPEVTQGIPLKMGLLLLTWQKVAPMTILLQIYQSIDINILIPS-ALISVLVGAWGGLNQTQTRKIMAYSSISHMGWMISILPYNPSLTIINLIIYIMLTLAVFLILHTHSFSSIKTM---SLLWNKAPVLLPIMAMILLSTGGLPPLTGFMPKWLIITELLKNNNPIMASIMAIAALINLFFYTRLIYSTSLTTFPTNNNSKMYI-QQTSNKMYLTL-------PSMIILSTLTLPLSSLAL------MN-LIMAISTNIILSLVLISVAFWLPQLNTYTEKAGPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQSMTINMMLTISFLFLSILGLGLAYEWKQKG--LEWTE-MTTTVLNIVLAYIFSLLGTVLFRSHLMSTLLCLEGMMLSLFIMTAMTSLNTHSMGMYSNPIVILVFAACEAAVGLALLVVVSNTYGTDYVKNLNLLQCMLKIIIPSLMLLPLTWLSSNKNVWINVTAHSFLINTLAM-ATLWQMNETGMGLS-QTFYIDPLSSSLIMLVIWLLPLMLLASQNHIKKETDYNKKLYISMLIILQTLLIPTFSANELMLFYILFEATLIPTLVIITRWGNQTERLSAGLYFLFYTLVGSIPLLIALISINSSLGSLNTLLLTLSNYMLN-QSW-----SNHILWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRLSVILDP-LTKSMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAIMIQTPWSFMGASALMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQTAFPLMALFWFLGSLTNLALPPSINLIGELLISISLFSWSNFTILLVGTNILITALYSLYMLITTQRGTLTPHMINLQPSHTRELTLMMLHITPLSLLMINPKFIMGNTL------MNTTTSI-IFLIFILLTLPVMMT---MFNFYKT-INFPAHVTST-IKLTFMLSLVPLCTLFYSNTEFLITNWHWMTINTIKLSVNLKFDLFCIMFLPVALFVTWSIMEFSSWYMHSDPNLNRFIKYLLMFLITMIILTSANNMFQLFIGWEGVGIMSFLLIGWWHGRQDANTAALQAILYNRIGDIGFVMTMAWLCLNNNSWEFQQIFMS-EN-KSLIPLLGLLVAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMISNNNTALTIMLCLGSMTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLLKPLPFTSSCLMIGSLALTGMPFLTGFYSKDLIIEAANTCYTNAWALLITLVATS-LTAVYSLRIIFFALMSKPRFPPLIIMNENNKMLMNPIKRLALGSIFAGFIISHNIPISSIQVMTMPWYMKTTAILVTIIGLSIALELNNLTYNLK--LNLQSPQNLFSTSLGYFTLIMHRLLPMKYLTMSFNTAMATLDLTWLEKAIPKTISLSNYKAFT--SYHKPKGLIKLYFMS---FLISL--VSIPILLFN---------FHE---- +>Ursus_thibetanus_ussuricus_Manchurian_black_bear +----MNENLFTSFITPM-MMGVPIVVLIVMFPSVLFPSPS-RLIDNRLVSIQQWLVWLTSKQMLSIHNRKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVATGFRYKTKASLAHFLPQGTPFPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTS-ISTITALITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSITILSMV-LALFIMFQLKISKYKYPE-TPEPK-SPSPSKK-LMP-W-EEKWTKIYSP-LL-LPRW----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFMIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAVVELTSTNIEWLHGCPPPYHTFEEPAYVML-K--------MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISIMLTAKLTHTNTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMTPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMFLLSLGLTTNMLTMYQWWRDIIRESTFQGHHTPVVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGACWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGSRKHMLQALFITISLGVYFTLLQASEYYEASFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFLRQLHFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSLIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDATTAFSSVAHICRDVHYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYLLSETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYAIKDALGALLLILALATLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILAIIPLLHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFTIIGQLASILYFTILLVLMPIAGIIENNLS---K---------MF--------MINTISLVVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPVADAVKLFTKEPLRPLTSSATMFIMAPILALTLALTMWIPLPMPYPLVNMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILPSVLLMNGSFALSTLITTQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLAEGESELVSGFNVEYAAGPFALFFLAEYTNIIMMNALTTILFFGAFHNPYMPELYTVNFTVKTLLLTASFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIITASI-P-PQM--MKP-PILIIITSTIVLGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMLGIIINLLHSGHW--TVSMIPNPIASTVITIALAMKLGLSPFHFWVPEVTQGVPLSSGMILLTWQKIAPLSVLYQISPSINPNLLVAM-AATSVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMHSLSTTTLSL---SHTWNKLPLIASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYATALTMFPSANNMKMKW-QFESTKKMILL-------PPLIVASTMLLPLTPLLSIMD---MN-LILALFTNMLLASLLVLIAFWLPQLNIYAEKASPYECGFDPVGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDNLMTMLIMALLLISLLAASLAYEWAEKG--LEWAE-MPVVYVNIFLAFIVSLMGLLIYRSHLMSSLLCLEGMMLSLFVMLTVTVLNNHFTLANMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIFPTMMLVPLTWASKPSMIWINTTAYSLLICLISL-TYFNQLSDNSLNFS-LLFFTDSLSAPLLALTTWLLPLMLMASQSHLSKETLTRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLHTQNNLGTLNLLMMQYWIQPLP-NSW-----SSVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLDP-LTSFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMVAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVVATFSWSNITITLMGANIIITALYSLYMLITTQRGKCTDHIKSIKPSFTRENALMALHLLPLLLLSLNPKVILGPIY------MNLFASS-IITTLLMLTMPIILT---GASTHKN-KFYPQYVKTT-ISYAFAVSTVPMMMFLYSGQEMIISNWHWMTIQTLKLTLSFKLDYFSMIFMPVALFVTWSIMEFSIWYMHTDPNINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVVYNRIGDVGFIMAMAWFLLNTNARDFQQIFAIEHD-NLNIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTIQTAALCLGAMTTLFTAACALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICMHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKVLPLTTTALIIGTLALTGMPFLTGFYSKDLIIETANTLYTNAWALLMTLVATS-MTAAYSTRIVFFALLGQPRFNPAIIINENNPLLVNSIKRLLLGSIFAGYLISHNITPTTIPQMTMPYYLKTTALAVTMLGFILALELNTTMQSLK--FNYPQNVFKFSNQLGYFPIIIHRFLPTMSLSMSQKMASMLLDTIWLENVLPKTISYFQMKSSI--TVSNQKGLIKLYFLS---FMITL--TLSFLVL----------NFHEWLP- +>Helarctos_malayanus_Malayan_sun_bear +----MNENLFTSFITPT-MMGIPVVVLIVMSPSILFPSPS-RLIDNRLVSIQQWLVRLTSKQMLSTHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVAIGFRYKTKASLAHFLPQGTPFPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALIN-ISTITALITFTILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSVTILSMV-LALFIVFQLKVSKYKYPE-TPTPK-SFSLSKK-LMP-W-EEKWTKICSP-LL-LPQR----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKVHFMIMFIGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAVVELTSTNIEWLHGCPPPYHTFEEPTYITL-K--------MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISTMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLGFDSYMTPTQELKPGELRLLEVDNRVVLPVEMTIRILISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMFLLSLGLTTNMLTMYQWWRDIIRESTFQGHHTPVVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGACWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGSRKHMLQALFITISLGVYFTLLQASEYYEASFTISDGVYGSTFFMATGFHGLHVIIGSTFLTICFLRQLHFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSLIDLPAPSNISAWWNFGSLLGVCLILQIMTGLFLAMHYTSDTTTAFSSITHICRDVHYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYLFSETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWVWGGFSVDKATLTRFFAFHFILPFIILALTAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALLLTLALTTLVLFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILAIIPLLHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFTIIGQLASILYFMIFLVFMPIAGIIENNLS---KW--------MF--------MINIISLVVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPVADAVKLFTKEPLRPLTSSTTMFIMAPILALTLALTMWVPLPMPYPLVNMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFALSTLITTQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNAFTTILFFGAFHNPYMPELYTVNFTVKTLLLTASFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIITASV-P-PQM--MKP-PIFIIITSTIVLGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKSNPR-AMEASTKYFLTQATASMLLMLGIIINLLYSGHW--TISMIPNPIASTVITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIAPLSVLYQISPSINPNLLVTL-AATSVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMHNLSTTTLSL---SHTWNKSPLIASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYATALTMFPSANNMKMKW-QFESTKKMILL-------PPLIVASTMLLPLAPMLSIMD---MN-LILALFTNMLLASLLVLIAFWLPQSNIYMEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDNLMTMLTMALLLISLLAVSLAYEWAEKG--LEWAE-MPVVYVNIFLAFIVSLTGLLIYRSHLMSSLLCLEGMMLSLFVMLTVTVLNNHFTLANMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIFPTMMLVPLTWASKPNMIWINTTAYSLLISLISL-TYLNQLSDNSLNFS-LLFFTDSLSAPLLALTTWLLPLMLMASQFHLSKETLTRKKLYITMLILLQLFLIMTFSAMELILFYILFEATLMPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLVMQYWAQPLP-NSW-----SSMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLHP-LTSFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVMVATFSWSNITITLMGTNIIITALYSLYMLITTQRGKYTDHVKSIKPSFTRENALMALHLLPLLLLSLNPKMILGPIY------MNLLTSS-IITTLLMLTVPIILT---NASTHKN-KFYPQYVKTT-ISYAFMISTIPMMMFLYSGQEVIISNWHWMTIQTLKLTLSFKLDYFSMIFMPVALFVTWSIMEFSIWYMHTDPNINQFFKYLLMFLVTMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFIMAMAWFLLNANAWDFQQIFAIEHD-NLNIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTIQTAALCLGAMTTLFTAVCALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPFTTTALIIGTLALTGMPFLTGFYSKDLIIETANTSYTNAWALLTTLIATS-MTAAYSTRIVFFALLGQPRFNPAVVINENNPLLINSIKRLLLGSIFAGYLISHNITPTTIPQMTMPHYLKTTALAVTMLGFILALELNSTMQGLK--FNYPQNPFKFSNQLGYFPTIIHRLLPMMSLSMSQKMASMLLDSTWLESVLPKSISYFQMKSSI--TVSNQKGLIKLYFLS---FMITL--ILSFFVL----------NFHE---- +>Trachypithecus_cristatus_Silvery_lutung +----MNENLFTPFTTPT-LLSLPAVVPIILFPTLLFPTSK-HLVNNRLVTIQQNLTQLILKQIMMIHNTKGRAWSLMLMSLIIFIATTNLLGLLPHSFTPTAQLSMNLAMAIPLWAGTVITGLRFKTKNSLAHFLPQGTPTLLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGSAVLALST-INFLATSLTFMLLLLLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTSSWFITIMTVL-PALYLIMQLKLLNTNYYL-SPPQK-IPNMQMF-NNP-W-QLKWTKIYLP-HL-QPQHS---MLINRWLFSTNHKDIGTLYLLFGALAGTVGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNLSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWARHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSAAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQACAKAHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSTGSFMSLVAMLLMIYMIWEAFASKRKVLSIEQPAYNLEWLHGSPPPYHTFDEPTFIKV-K--------MAHPVQLGLQDATSPIMEELIAFHDHAFMIVSLISFLVLYILLSVLTTKLTSTNITDAQEMETIWTILPAIILVLIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVPPIEAPVRMMITSQDVLHSWTIPTLGLKTDAIPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGAFSALLMTSGLIMWFHFYSMTLLMLGLLTNMLTMYQWWRDIVRESTYQGHHTTPVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPHLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKQMIQALLITILLGIYFTLLQMSEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTVCLICQLLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MAPLRKSNPIMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLTETWNIGIALLLMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGANLVQWVWGGYSIDNPTLTRFFTLHFTLPFIIATLTALHLLFLHETGSNNPCGIPSNSDKIPFHPYYTIKDILGLIFLLLILMTLVLFSPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLSSILVLTIMRMLHKTKQQSMAFRPLSQFLLWSLTAILLTLTWIGSQPVSQPFIIIGQMASIMYFTTILILMPLASLTENNLL---KWT-------MF--------TMNILLVTLPAIAAMAFLTLTERKLLGYMQLRKGPNIVGPYGLLQPFADAVKLFTKEPLKPSTSTITLYIIAPALAFIIALLLWMPLPMPNSLINLNLGLLFILATSSLAVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSILLMSGSFNLHMLITTQEHLWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNTEYAAGPFALFFMAEYMNIIMMNAQTTTIFLGTLYPIHSPELFTACFITKTLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLAFLMWYISVSIMTSGI-P-PQI--MNP-LAQLIIYFTMFMGTIITLLSSHWFLAWAGLEMNMLAFTSILIKKTSSR-STEAATKYFLVQSTASMILMMAIMYNNLFPEQW--TMLNNINQPSSLAMTMALAMKLGMAPFHFWVPEVTQGTPLIPGLLLLTWQKLAPISIMYQIHSSINTNILLIL-SILSIMVGSWGGLNQTQLRKILAYSSITHMGWMMTTLTYNPDITIFYLLTYIVLVTTAFLALNLNSNTTTLTL---SHTWNKLTWLMPLMSSTLLSMGGLPPLTGFLTKWITIQELTKNNNFIMPTIMIIMTLLNLYFYLRLIYITSMTLLPVSNNTKMKW-QFENTKTTLLI-------PPLIILTTFLLPMSPTILTIP---MN-LVLALTISTLLTLLLMIIMFWLPQLSSYTEKTNTYECGFDPLNSACIPFSMKFFLVAITFLLFDLEIALLLPLPWALKTTNLPMMIKSSIMLITILTLSLAYEWTQKG--LDWTE-MPVIYMNIMLAFTISLLGMLTYRSHLMSFLLCLEGMMLSLFIMSTLMALNMHFPLANIVPIALLVFAACEAAVGLALLISISNTYGLDHIHNLSLLQCMLKMIFPTIMLLPTTWFSKNNMIWINLTMHSLIISLIPL-MFFNQASDNLTSYS-TYLSSDPLSTPLLTLTAWLLPLMIMASQYHLHNENPLWKKLYLSMMIFLQISLIMTFMTTELILFYISFETTLIPTLIIITRWGNQAERLNASTYFLFYTLAGSLPLLIMLLFMYNNTGSLNIVLLTLTAQELT-NTW-----SPNLTWLACMMAFMVKMPLYGLHLWLPKAHVDAPIAGSMVLAAVLLKLGGYGMMRLTSILSP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIMASLIQTPWSFTGAIILMIAHGLTSSMLFCLANSNYERTHSRIMLLSRGLQILLPLMAFWWFAANLTNLALPPTINLIGELLVVTTSFSWSHVTIMLTGLNMLITALYSLHMFITTQRGMLTPHIMNMKPSFTRENMLMFMHISPIILLSLNPNIIMGFTS--------MHASI-VMLTLTYLMLPIITT---LIKPNKN-HLYPNYVKTT-MMFAFIFSLFPMTLYILLDQDMIISNWHWTTIQSLELTLSFKLDYFSMLFTPIALFITWCIMEFSLWYMSSDPNINQFFKYLLIFLITMLILITANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAATQAILYNRIGDIGFILTMAWFLLHYNSWDLQQMFILDSN-PNLLPLMGLLLAAMGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNMLIQSLTLCLGAITTLFMAICALTQNDIKKIVAFSTSSHLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKMMPLTSTSLTIGNLALTGMPFLTGFYSKDLIIETANTSYTNAWALSTTLIATS-LTSAYSTRTIILALTGQPRFSTSVHINENNPALLNPMKRLTLGSLLVGFLITNNIFPTTPPQLTMPHYLKLLALCVTILGFLMALDLTLMTNNLK--MSTPSHMFKFSNMLGYFPITIHRMIPYQNLIMSQNLAFILLDSIWLEKLMPKTISHVHTTTSI--TITTQKGMIKLYFLS---FLIPL--ILVTLLTM----------------- +>Melursus_ursinus_sloth_bear +----MNENLFTSFTTPT-MMGIPIVVLIVMFPSLLFPSPS-RLINNRLVSIQQWLVRLTSKQMLSTHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLVLTS-ISTITALIAFTILVLLTILEFAVALIQAYVFTLLVGLYLHDNTMPQLDTSTWSITILSMV-LTLFIMFQLKISKHKCPE-APEPK-SPLPPKK-LMP-W-EEKWTKIYSP-LS-LPPR----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAVAELTSTNIEWLHGCPPPYHTFEEPAYVML-K--------MAYPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISIMLTTKLTHTSTMDAQEVETVWTVLPAVILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMTPTQELKPGELRLLEVDNRVVLPMEVTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMFLLLLGLTTNMLTMYQWWRDVIRESTFQGHHTPVVQKGLRCGMVLFIVSEVFFFAGFFWAFYHSSLAPTPQLGACWPPTGITPLNPLKVPLLNTSVLLASGVSITWAHHSLMEGSRKHMLQALFITISLGVYFTLLQASEYYEASFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFLRQLHFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSLIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVHYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYLFSETWNTGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIILALVMVHLLFLHETGSNNPSGIPSNSDKIPFHPYYTIKDIMGALLLILALATLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIIPLLHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEYPFITIGQLASILYFMILLVLMPIAGIIENNLS---KW--------MF--------MINIISLVVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPVADAMKLFTKEPLRPLTSSATMFIMAPILALTLALTMWIPLPMPYPLANMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFALPALMPTQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYTSIIMMNALTTILFFGAFHNPCMPELYTVNFTVKTLLLTASFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIITASI-P-PQM--MKP-PILIIIMSTVILGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKFNPR-ATEASTKYFLTQATASMLLMLGIIINLLYSGHW--TVSTISNPVASTVITIALAMKLGLSPFHFWVPEVAQGISLSSGVILLTWQKIAPLSVLYQISPSINPNLLVTM-AATSVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMHNLSTTTLSL---SHTWNKSPLIASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYVRLTYATALTMFPSANNMKMKW-QFESTKKMILL-------PPLIVASTMLLPLTPMLSIMD---MN-LILALLTNMLLASLLTLIAFWLPQLNIYAEKVSPYECGFDPVGSARLPFSMKFFLVATTFLLFDLEIALLLPLPWASQTDNLMTMLTMALLLISLLAASLAYEWTEKG--LEWAE-MPAVYVNIFLAFIVSLTGLLVYRSHLMSSLLCLEGMMLSLFIMLAVTVLNNHFTLANMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIILPTMMLMPLTWASKPNMIWINATAYSLLISLISL-TYLNQLSDNSLNFS-LLFFTDSLSAPLLALTTWLLPLMLMASQFHLSKETLTRKKLYITMLILLQLLLIMTFSAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLMMQYWTQPLP-NSW-----SSIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGP-LTSSMAYPFMMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLMGELFVVVATFSWSNITITLMGTNIIITALYSLYMLITTQRGKYTDHVKSIKPSFTRENALMALHLLPLLLLSLNPKMILGPIY------MNLFTSS-IITTLLMLTMPIILT---STSTYKN-KFYPQYVKTT-VSYAFMVSTIPMTMFLYSGQEMIISNWHWMTIQTLKLTLNFKLDYFSMIFMPVALFVTWSIMEFSIWYMRTDPNINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFIMAMAWFLLNTNAWDFQQIFAVEHK-NLNIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLVRFHPLMEHNKIIQTATLCLGAMTTLFTAACALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICMHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTLPLTATALIIGTLALTGMPFLTGFYSKDLIIETANTSYTNAWALLTTLVATS-MTAAYSTRIVFFTLLGQPRSNPIIIINENNPLLINSIKRLLLGSIFAGYLISHNITPTTIPQMTMPFHLKMTALAVTMLGFILALELNSTMQSLK--FNYPQNPFKFSNQLGYFPIITHRLLPMMSLSMSQKMASTLLDAIWLENVLPKSISYFQMKSSI--TVSNQKGLIKLYFLS---FMITL--ALSFLVL----------NFHE---- +>Ailuropoda_melanoleuca_giant_panda +----MNENLFASFTTPM-MMGVPIVVLIIIFPSILFPSPN-RLINNRLATVQQWLIQLVSKHMLSIHNYKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVVMGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLVLMN-INPVTALITFIILILLTILELAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-LTLFIMFQLKVSKHNYPE-FPELK-TTPLSKK-PMP-W-EEKWTKICSP-LL-LPQW----MFINRWLFSTNHKDIGTLYLLFGAWAGMTGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAVIELTTTNIEWLHGCPPPYHTFEEPAHVML-K--------MAHPFQTGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISIMLTTKLTHTNTMDAQEVETVWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMTPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLEMVPLSYFEKWSASML----------MIHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSVYLLMLGLTTNMLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGACWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFLRQLHFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLVKIINNSFIDLPTPSNISTWWNFGSLLGVCLILQILTGLFLAMHYTSDTATAFSSVAHICRDVNYGWFIRYMHANGASMFFICLFMHVGRGLYYGSYLFPETWNIGIILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWVWGGFSVDKATLTRFFAFHFILPFIISALAMVHLLFLHETGSNNPSGIPSDPDKIPFYPYHTIKDILGVLFLVLALMTLALFSPDLLGDPDNYTPANPLSAPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILTIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFTILLVLMPITSIIENSLS---KW--------MF--------MINIFSLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSMTMFIMAPILALTLALTMWVPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNALTTILFFGAFHSPYMPELYIVNFTVKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIITASI-P-PQT--MKP-AILITITSTVVLGTMIVLFSSHWFMIWVGFEMNMLAIIPILMKKYNPR-AMEASTKYFLTQATASMLLMLSIIINLLCSGHW--TVSTIPNPVASTMITIALTMKLGLSPFHFWVPEVTQGISLSSGMILLTWQKIAPLSILYQISPSVNSNLLLMM-AITSMLVGGWGGLNQTQLRKILAYSSITHMGWMAAIMVYNPTLAILNLTIYIMMTLGTFMLFMHSSSTTTLSL---SYTWNKFPLMAPLILMLMLSLGGLPPLSGFIPKWMIIQELTKNDMIIMPTLMAITALLNLYFYTRLTYTTALTMFPATNNMKMKW-QFETTKKTTLL-------APLIVTSTMLLPLTPMLAALD---MN-LILALLTNVLLASLLVLIAFWLPQLNIYAEKVSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWALQTNNLMTMLIMALLLISLLAASLAYEWTEKG--LEWAE-MSVVYINLFLAFTMSLMGLLIYRSHLMSSLLCLEGMMLSLFVMLAVTILSNHFTLASMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIILPTMMLVPLTWMSKPNMIWINTTTYSLLISLISL-TYLNQLSDNSLNFS-LTFFTDSLSAPLLVLTTWLLPLMLMASQFHLSKETLTRKKLYITMLILLQLFLIMTFSATELIMFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYAQNSLGSLNFLMVQYWTQPLP-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTMLNP-LTNFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMAAWWLLAGLTNLALPPTINLIGELFVVMATFSWSNITILLMGVNITITALYSLYMLISTQRGKYTDHIKNIKPSYTRENALMALHLLPLLLLSLNPKVVLGFIY------MNLLTSF-TITTLFMLIMPIILT---CTPAYEN-KLYPQYVKTT-VSYAFTISMIPMVMFIHSGQEAIISNWHWMTIQTLKLSLSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHADPNINRFFKYLLMFLVTMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFIMAMAWFLLNTNAWDFQQIFMIEHK-NLNIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLVRFHPLMEHNKTIQTVTLCLGAMTTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNNEQDIRKMGGLFKSLPFTTTALIIGTLALTGMPFLTGFYSKDLIIETANTSYTNAWALLTTLIATS-MTAAYSTRIVFFTLLGQPRYSPIITINENNQFLTNSVKRLLLGSIFAGFLISHNITPTTVPQMTMPCHLKMMALTVTILGFILALELNLAMQNLK--FDYPLSTFKFSNQLGYFPTTLHRLAPMMGLSMSQKTASMLLDAIWLENVLPKSISYFQMKSSI--TVSNQKGLIKLYFLS---FMITL--ILSLFML----------NFHEWLP- +>Delphinus_capensis_Longbeaked_common_dolphin +----MNENLFTSFMIPV-MLGIPITTLIIMFPTMLFPTPN-RLINNRMIAIQQWLTKLTSKQLMVTHSPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNLGMAIPLWAGTVFIGFRNKTKMSLAHLLPLGTPTFLIPMLVMIETISLFIQPMALAVRLTANITAGHLLLHLIGSATLALMS-ISLFTALITFIILTLLIILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMI-FTLFALLQLKISKHFYSP-SPKPV-DTKLQKQ-QTP-W-NHTWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQLYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWTKIQFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFEEPVYVNL-KYS------MAYPFQLGLQDAASPVMEELLQFHDHALMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTVLPAVILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMVLPMQMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSMILLTLSFLTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIMLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKILNDAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWFIRYLHANGASMFFICLYAHIGRGLYYGSYMFQETWNIGVLLLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAAVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGALLLILTLLALTLFTPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILIFIPMLQTSKQRSMMFRPFSQLLFWTLIADLLTLTWIGGQPVEHPYIIVGQLASILYFLLILVLMPTAGLIENKLL---KW--------MF--------MINILTLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFMIAPVLALALALTMWAPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLNTTQEKLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGAFHDPYMPELCTTNLIIKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTAGI-P-PQT--MNP-FVSITLLTTLILSTTIVTISSHWLFAWIGLEMNMMAIIPIMMKKPNPR-ATEASTKYFLTQATASSLLMLAIIINLMHSSQW--TIMKLFDPTASILMTMALAIKLGLSPFHFWVPEVTQGIPLSTGLILLTWQKLAPISILYQISPSINLHLMITM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILLYNPALTLLNLLIYIVMTFTMFMLLIQNSTTTTLLL---SQTWNTMPIMTTFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPTLMAITALLNLYFYMRLTYSTALTLFPSTNNMKMKW-QFYPTKQMTLL-------PTAIVLSTMLLPLTPAFFILL---MN-LLLTLLTNTTLALLLMLVAFWLPQLNTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLTTMLLMALFLISLLAASLAYEWTQKG--LEWDK-MSLVHINILIAFTVSLTGLLMYRSHLMSALLCLEGMVLSLFILATLTILNTHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKSSFIWINTTTHSLLISFTSL-LLLNQFNDNSLNYS-LMFFSDPLSAPLLMLTMWLLPLMLMASQSHLLKEPLARKKLYITMLVMLQVLLIMTFTAMELIMFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALTYLQNTVGSLNFLLLQYWAQPLS-TSW-----SNTFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTEHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFFPLMATWWLLACLTNLALPPTINLIGELLVIMSTFSWSNLTIILMGVNIVITALYSLYMLIMTQRGKHTHHINNLTPTFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSS-TLLTLLMLMAPIVAS---STNFYKN-NKYQHYVKNM-TLFAFITSLIPMTMFIHTNQEMLISNWHWITIHTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLHNTNAWDLQQIFTLNQN-PPILPLMGITLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQTMMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALIIGCFALTGMPFLTGFYSKDLIIEAATSSYTNAWALLLTLIATS-MTAIYSTRIIFFTLLEQPRFPPLMNINENNPMLINPIKRLLIGSIFAGFILSNSMPPMNIPLMTMPLYLKLTALMVTILGFILAFEINNYSKNLK--YPYSSDSTKFSTLLGYFPTIMHRLPPHLVLTMSQKFATSLLDLTWTETILPKTTALIQLKAST--LTSNQKGLIKLYFLS---FLITM--TLSMLLF----------NYPE---- +>Cervus_nippon_taiouanus_Formosan_sika_deer +----MNENLFASFITPM-MLGLPLATLIVMFPSLLFPTSN-RLVNNRLISLQQWMLQLVSKQMMGIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGAALALVS-ISTTMALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LALFIIFQLKILKHNFHF-NPELT-LTKTQKQ-NTP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDATPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGILLLMLFLMLLVLFAPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPFLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIIIGQLASILYFFIILVLMPITSTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTIGVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPVLPELYTINFIMKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFTSSI-P-PQT--MNP-IIFILILSTMMMGTIIVMISSNWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEAATKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMFMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWIKMPVMTILVLITLLSMGGLPPLSGFMPKWMIIQELTKNDSLILPTIMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSILE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVALAGLLMYRSHLMSSLLCLEGMMLSLFVMASLTILNSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFSDNSLNFS-VMFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNITGSLNFLVLQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLINLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-TLVTLLLLTIPIMTT---SSDNHKT-SNYPLYVKTT-ISYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFALTPN-NSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTIPQLTMPHYLKMMALTVTVLGFILALEISNMTQNLK--FNYSTNIFKFSNMLGYFPTIMHRLAPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQTKMSI--MVTNQKGLIKLYFLS---FLVTI--TISMIL------------------- +>Tamandua_tetradactyla_southern_tamandua +----MNENLFASFISPT-MMGLPIVMLIIMFPTILFPAPN-RLINNRMISMQQWLTNLVLKQMMMIHNPKGRTWALMLTSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVIMGFRHKTKSALAHFLPQGTPMSLIPMLIIIETISLFIQPIALAVRLTANITAGHLLMHLIGGATLALMS-ISPTTALITFIILVLLTMLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLVTITSMI-LTLFILMQLKFTKHYFHQ-TPMPD-TPNSTKQ-QTP-W-ETKWTKIYLP-PS-SLQR----MFISRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSILIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLTHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMNQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDTWAKVHFVIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVIIMIFMIWEAFASKREVSTVELTTTNVEWLHGCPPPYHTFEEPAFVKN----------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISTLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEIDNPLLTVKTMGHQWYWSYEYTDYEDLGFDSYMIPTTDLKPGELRLLEVDNRVVLPMELTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLMATRPGLFYGQCSEICGSNHSFMPIVLELVPLKHFEAWTMSLI----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLAMWFNFNSMNLLALGLLTNFLTMYQWWRDVIRESTFQGHHTSTVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGILALNPLEVPLLNTAVLLASGVSITWAHHSLMEGNRTHMLQALFITISLGVYFTLLQASEYFEAPFTISDGVYGSTFFMATGFHGLHVIIGSSFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTHIRKTHPLFKIINQSFIDLPTPSNISAWWNFGSLLGVCLVIQTLTGLFLAMHYTSDTITAFSSVTHICRDVNYGWLIRYIHANGASMFFMCLYLHVGRGLYYGSYLYLETWNIGVILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMTHLLFLHETGSNNPLGLSSDMDKIPFHPYYTIKDILGLLIMIATLVTLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVCSILVLMIMPLLHTAKQRSMMFRPLSQLLFRLLVANLLILTWIGGQPVEHPFIIIGQVASISYFSIILILMPLAGILENHLM---KL--------MF--------MINIACLIVPILLAMAFLTLVERKTLGYMQLRKGPNIVGPHGLLQPFADAVKLFTKEPLRPLTSSKLLFMVAPTLALTLALTMWAPLPMPYSLINLNLGVLFILAISSLAVYSILWSGWASNSKYALIGAIRAVAQTVSYEVTLAIILLSILLMSGSFTLTNLITTQEQMWLIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNALTTLLFLGAHHTPFVPEAYTANFVLKTLMLTATFLWIRASYPRFRYDQLMHLLWKNFLPITLAMLMWHVSLPMSLASI-P-PQT--MNP-LVLMMIMVTLLSGTMITMCSSHWLLIWMGLELNMFAMIPILLMKANPR-STEAATKYFLVQTTASMLLMLAVLVNLINSGQW--TIMKAHNQMALSIMTISLAMKLGLSPFHFWLPEVCQGVPLIQGMILLTWQKLAPITILYQISPYMDITLILTI-AILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMAAIIVFNPTLTMLNLIMYLIMTTPMFMLLSYCSATTILSL---SHMWNNTPLMTTLLTLVLMSMGGLPPLSGFLPKWMIIQEMTKNNLLMVPTLMAILALLNLFFYMRLIYSSSLTMFPSNNSTKMKW-QLKQQTIMPAM-------PALITLSILVIPMSPMLTTLS---MN-MVLTLLTNITLALLLVTIAFWLPQLNNYSEKSSPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWATQNNQLEPVLITALFLISLLGLGLAYEWIQKG--LEWTE-MSSIYMNILLAFTMALLGLLMYRSHLMSSLLCLEGMMLSLFILSTVTMLNTSFTLSSMMPVMLMVFAACEAAVGLALLVTVSNTYGLDYVQNLNLLQCMLKLIIPTMMLLPLTWLSKKETLWINSTIHSLLISLIGL-HLFYQPFDLSLNFS-TTFFADPLSTPLLALTMWLLPLMLLASQSHLSKETITRKKLYISMLIMLQMLLIMTFTATELLLFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLMGSLPLLVALTYIQNNTGSLNLLTMKYLTQLLP-MQW-----ASNFLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITVMLDP-LTEYMAYPFIMLSLWGMIMTS--SILLRQTDLKSLIAYSSVSHMALVIMAIMIQTPLSFIGASVLMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTIIPLMASWWLLASLTNLALPPSINLIGELFVMIPSFAWSNFTMLLMGLNVVITALYSLYMLIMTQRGKPTSHAYMIKPTFTRENSLMLMHLLPLILLSIHPKLILGLSY------MNAFTLF-TMTTIMILMLPIMTP---I-LTDNK-TMYPYHVKTS-IMYAFTTSMIPTTMFLMSDQETIISNWHWITVQTMKLSMSFKMDYFSLMFVPVALFVTWSIMEFSMWYMHSDPYINQFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGLIMALAWFMLNSNSWDMQQIFMLNPN-MTPIPLMGLLLAAMGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLVRFHPLLQTNQLILTMALCLGAMTTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHSLNNEQDIRKMGGLFNALPLTTSSLIIGSLALTGMPLLTGFYSKDIIIETANTSNTNAWALLITLIATT-LTAVYSTRIIFFSLLSQPRFQTTISINENNPCLLNPIKRLAMGSIFAGFMITNNIPPMSVQQMTMPSYIKLTALAVTITGFILAMELNNTTHNLQ--YNYPSQHHSFSTMLGYFPNIIHRLYPHSVLKTSQNLATSALDLIWLEKIAPKSLSKMSISVSL--TMSNQKGLIKLYFLS---FMLSI--MLALATL----------TFYYE--- +>Tarsius_wallacei_ +----MNENLFASFITPT-MMGLPVVVLIIMFPTMLYPTSN-RLINNRLISLQQWLIQLVTKQMMMMHNNKGQTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRHKTKASLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLSS-INSIAASTTFIILILLTILEMAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTILSTT-LTLFILFQLKISKTMYPL-NPSLK-NIKMQTH-KTP-W-ELKWTKIYSP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFTLHPTWAKTHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFMVWEAFASKREVLAVELPNTNLEWLHGCPPPYHTFEEPAYVKA-Y--------MSYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINSPSLTIKTMGHQWYWSYEYTDYEDLNFDSYMVPTVDLKPGELRLLEVDNRVVLPMEIPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLMSTRPGLYYGQCSEICGANHSFMPIVLELVPLKHFEDWLTSMI----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSSLLLTLGLITNTLTMYQWWRDIIREGTFQGHHTSIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKQMLQALLITIILGTYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNTRKTHPIMKIINHAFIDLPAPSNISAWWNFGSLLGICLGVQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFVVTALVMVHLLFLHETGSNNPSGITSDSDKIPFHPYFTIKDILGLAILILALMLLTLFTPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIIPLLHMSKQRSMMFRPLSQCLFWILVADLLTLTWIGGQPVEHPFIIIGQTASILYFTIILILMPLTNLMENKML---KW--------MF--------MINLLTLIIPVILAMAFLTLAERKVLGYMQLRKGPNIIGPYGLLQPFADAMKLFIKEPLQPLTSASLLYIIAPTLALALALIMWIPMPMPYPLLNMNLSVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTVSYEVTLAIILLAVLLMNGSFTLVSLILTQEYTWLIMPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIIMMNALTTTIFLGALHNIIMPQMYTINFMVKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISMPILMCSI-P-PHQ--MKP-IIFSSIFLTLFSGTLITMLSSHWLLVWIGLEMSMLAITPLLIKKANPR-STEAATKYFLIQATASMILIMSVIINMSYSGQW--TILNKYNNLSSMMILIALMMKLGLAPFHFWVPEVTQGVSLVSGLLLLTWQKLAPISILYQINMILDLTPLLLI-TLTSITLGGWGGLNQTQMRKIMAYSSIAHMGWMVAILKYNPSIMILNLLIYIILTVSLFSMLYTLSSTTILTM---SHSWNKTPLMPSLMLLTLLSLGGLPPLTGFLPKWAVIQELIKNNSILIPTLMAITALLNLYFYMRLIYSTTLTMFPTNNNTKMKW-QFEKMKPMLMM-------STLTILSTLLLPLSPVMLPMG---MN-LIISLVTNTTLALLLVTIAFWLPQLNMYTEKSSPYECGFDPTESARLPFSMKFFLVAITFLLFDLEIALLLPIPWATQTMNLSLVLTVAMALITILALGLTYEWLQKG--LEWNE-MPSIYMNLIIAFLSSLLGMLMYRSHLMSSLLCLEGMMLSMFIMTSLTILNLHFTLANMIPIILLVFAACEAAIGLALLVMVSNTYGLDYVQNLNLLQCMLKIILPTLMILPLTWYSKKHNIWINTTTHSLTISAITL-YLLNCPYANTMNFS-LTFFTDSLSTPLIILTTWLFPLMLLASQNHLSKESLARKKLYISMLTLLQMFLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLIALIYLQKFLGSLNLMINPLIIQHTL-NSW-----SNNTLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMTIILEP-MTKYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFIGATALMIAHGLTSSLLFCLANTNYERVHSRTMTLARGLQTLLPLAATWWLLASLANLALPPTINLIGELVVMMASFSWSHLTIILVGMNMIITALYSLYMLTTTQRGKYTYHINYINPSFTRENTLMIMHILPIILLSINPKLIMGYMY------MNLFPSL-ILLSLMLLIIPFMLS---ATKKYNH-NTYPNYVKNS-IACAFMTSLIPTIMFLHTGKEMIISNWHWMTIQTMKFSMSFKMDYFSMIFMPVALFVTWSIMEFSMWYMHSDPLIHRFLKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVVAMAWFLTYSNSWDFQQMFNLYSN-SHTLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLLEMNETIQTITLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLLKPMPFTASSLLIGSLALTGMPFLTGFYSKDLIIEAANMSYTNAWALSVTLIATS-LTAVYSIRIIFFALLGQPRFLPSTNINENNPLLMNPIKRLALGSIFAGFIISNNISPTTIPQMTMPWYLKLSAVIVTILGFTLAMELNTLSSYLK--LKYPTQPILFSNQLGFFPTTTHRLYPLLNLNISQKTASSLLDLAWIEKSMPKSMTKTHMTAST--TTSNQMGLIKLYFMS---FLITL--VLGMYLVL----------------- +>Rhinoceros_sondaicus_Javan_rhinoceros +----MNENLFASFTTPT-MMGLPIVILIIMFPCIMFPSSN-RLVNNRLISIQQWLLQLTSKQMMSIHNNKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWTGTVLVGFRYKTKASLAHFLPQGTPIFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLALMN-ISPTTALITFIILVLLIILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFIIITSMT-ITLFIMLQLKLSKHSYPS-NPAPK-PTKASMY-TTP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLSPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASINLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLALPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTIGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYSLNQTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMMFMVWEAFASKREVSTVELTSSNLEWLHGCPPPYHTFEEPVYVNL-K--------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDKINNPSLTIKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLISTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLVMWFHYNSTFLLTLGLTTNLLTMYQWWRDIIRESTFQGHHTSAVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGIYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTPDTTTAFSSVAHICRDVNYGWMIRYLHANGASMFFICLFIHVGRGLYYGSHTFLETWNIGIILLLTLMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAITHLLFLHETGSNNPSGIPSNTDKIPFHPYYTIKDILGALLLIMVLLTLVLFFPDILGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTFSILILLLIPSLHTSKQRSMMFRPLSQCMFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFSLILVLMPLAGIIENSLL---KW--------MF--------TINILLLVIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPATSSTTMFIVAPIMALTLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNAFTTILFLGAFHNPYMPELYTVNFTIKTLLLTTSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPITMLSI-P-PQT--MNP-IVFSTILTTAIMGTMIVMMSSHWLMIWIGFEMNLLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMLAIIINLMYSGQW--TIMKIFNPTASTIMTSALIMKLGLSPFHFWVPEVTQGISLMSGLILLTWQKLAPMSILYQIAPSTNLNMLMTS-ALLSILVGGWGGLNQTQLRKIMAYSSIAHMGWMTAILAYNPTMTVLNMLIYIMMTLTTFMLLMLNSSTTTLSL---SHTWNKTPLITSLILITMLSLGGLPPLSGFMPKWMIIQELTKNNSIILPTSMAIMALLNLYFYLRLTYSTSLTMFPSTNNMKMKW-QFENSKRMNLL-------PTLTIMSTLLLPLTPTMFILN---MN-LMLTLLINTLLSSVLVLIAFWLPQLNIYTEKSSPYECGFDPMVSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTDLKTMLTMALILISLLAASLAYEWTQKG--LEWTE-MSLIHINIFLAFTVSLMGLLMYRSHLMSSLLCLEGMMLSLFIMATTMVLNSHFTLAIMMPIILLVFAACEAALGLSLLVMISNTYGTDYVQNLNLLQCMLKIIIPTLMLMPLTWLSKNNMIWINTTTYSLLISLISL-SFLNQFNEDSLNVS-LAFFSDPLSAPLLVLTTWLLPLMIMASQHHLSKEPLSRKKLYITMLIMLQLLLIMTFTATELIFFYILFEATLIPTLIIITRWGNQTERLNAGFYFLFYTLTGSLPLLIALIHIQNITGSLNLLLIQYSTQTLP-NSW-----SSIFLWLACMMGFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMILNP-LTSHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATTLMIAHGLTSSVLFCLANSNYERTHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLVGELFVVVASFSWSNLTIILMGTNIIITALYSLYMLITTQRGKYTYHINNIKPSFTRENTLMALHLLPLLLRSLNPKIIMGAMY------MNMFSSL-MLTSLFILTLPIITS---TLNTHKN-NNTPYHMKNT-ISLAFITSLIPAMMFIYSGQEMIVSNWHWMTTQTLELSLSFKLDYFSMIFVPVALFVTWSIMEFSIWYMHSDPHITQFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFIMSMAWFLSNMNSWDLQQIFTLDHN-HTNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKMIQTFTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPFTATSLTIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-LTAAYSTRMVFFTLLGQPRFPTLITINENNPHLTSSIKRLMIGSIFAGFFISNNIYPTTTPKMTMPPYLKLMALIVTILGFALALELSLTTYNLK--FKHPSNPLKFSSLLGYFPTIFHRLPTSMSLLASQKSASLLLDSTWLENILPKSISLFQMKTST--LVSNQKGLIKLYFLS---FLITL--TLSLLLL----------TPHG---- +>Pteromys_volans_Siberian_flying_squirrel +----MNENLFASFITPT-LMGLPVIILIISFPNILFPSPN-RLVNNRLVSFQQWLIQLVLKQMMAMHNLKGRTWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRHKTKASLAHFLPQGTPVPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTS-ISPPTAMITFIILILLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTIISMI-LALFILFQSKMSNHSYYS-NPSLK-TMKLTAH-STP-W-EKKWTKIYLP-HS-LPLH----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDSTWAKIHFTVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMIMIFMIWEAFASKREVLTVEMTTTNLEWLHGCPPPYHTFEEPTYVKA----------MAYPLELGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINDPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSELKPGELRLLEVDNRVVLPMELPVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKHFENWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLVMWFHFNSSSLLTLGLLTNLLTMYQWWRDIVREGTFQGHHTTIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPIGINPLNPLDVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALAITIALGLYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLLVCLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLIKIVNHSFIDLPAPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGLYYGSYTYFETWNMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPSGLTSDSDKIPFHPYYTIKDILGALLLGLLFMILVLFTPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILMLFPILHLSKQRSMMFRPLSQCLFWILTADLFTLTWIGGQPVEYPFIIIGQLASILYFAIILILLPLTSLLENKLL---KW--------MF--------LINLLLLIIPIMLAMAFLTLVERKMLGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPSTSSIILFIIAPSLALTLAITMWIPLPMPQPLINLNMGVLFILATSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQQFMWLLLPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTATLFLGAFLNPPITETFTLSFTIKTLILTSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIITACI-P-PQT--MNP-LTSSTIYLTLFSGTFIVLISSHWLLIWIGLEMSLLSIIPILIFKANPR-STEAASKYFLVQATASMIMMMAVILNFMNSGQW--TIINPMNQLSSLMLTIALSMKMGLAPFHLWVPEVTQGVSLMSGLILLTWQKIAPISIMLQIAPSINSPLIMTM-AFLSIILGGWGGLNQTQLRKILAYSSIAHMGWMMAIITFNPMLTIFNLIIYIMLTICMFLTLHYNKKTNTLSL---SNSWNTSPLLVSIILIILMSLGGLPPLTGFSPKWMIIKELVSNNNIIISTLMAMTALLNLYFYMRLIYSTSLTLFPSSNNMKIKW-QFENTKMTLFT-------PTLIILSTMTLPLMPILSTLY---MN-LFLTLIINTTLALLLISVAFWLPQINTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLTLMLTMALMLITILTLGLAYEWIQKG--LEWIE-MPLIILNMFLAYLASLLGMFIYRSHLMSSLLCLEGMMLSMFILSTLITLNFHFSLSFMLPILLLVFAACEAAVGLALLVMVSNTYGLDYVQNLNLLQCMLKIILPTTLLAPLMWFSKNSLIWINSSIHSLIISMIVL-LTLFHEDDNSLTFS-TTFFSDSLSTPLLMLTAWLLPLMIMASQNHLAKEPIVRKKLYILMLIFLQLFLIMTFSASELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALISIQNSSGTLNFMISLYSSNNIL-SSW-----TNDILWLACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMIRITTILHP-ITSTMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPFMATWWLLASLTNLALPPSINLIGEIFIILSSFSWSNFTIILMGLNMLITALYSLYMLITTQRGKFTYHMSNINPTFTRENTLMFMHIFPLALLSLNPMIILGQLY------MNLMSSL-TLLSLIALTIPIFLT---FTSLYES-NKYPNYVKLS-IMCALASCLPPMLMFINSNYELIITNWHWMTIQTVNLSMSFKLDYFSMVFMPVALFVTWSIMEFSIWYMHSDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLTMAWFLMNSNSWEFQQLFMT--D-TQLLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLLENNETAKTIALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLYNAMPFTSSSLMIGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALIITLIATS-LTAVYSTRIIFFALLGQPRFSALTPINENNPQLLNSIKRLLIGSIFAGFILSYNIPPMNVPLLTMPTYLKMTALLVTIIGFMIAMELNLLTLNLK--TTYYSHLSKFSNMLGYFPTTMHRLNPYFSLITSQKTATTLLDLIWMEKSIPKLIANIHASASI--MTSSQKGLIKLYFMS---FLIST--TLTLLFMA---------YYLV---- +>Mus_terricolor_Earth-colored_mouse +----MNENLFASFITPT-MMGLPIVVAIIMFPSILFPSSK-RLINNRLHSFQHWLIKLIIKQMMLIHTPKGRTWTLMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVITGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMS-ISPPTATITFIILLLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISSM-ITLFILFQLKISSQTFTL-PPSPK-SLMTLKT-KTP-W-ESKWTKIYLP-HS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLVMIFMIWEAFASKREVASVSYASTNLEWLHGCPPPYHTFEEPTYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSITLLSIGLLTNVLTMYQWWRDVIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGIFPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITILLGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNMRKTHPLFKIINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGMYYGSYTFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITAMVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILIMFLFLMTLVLFFPDMLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSLMFRPITQILYWILVANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIEDKML---KLYP------MY--------FINILTLLVPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPTLSLTLALSLWVPLPMPHPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSYSLQTFITTQEHMWLIIPAWPMAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTTIIFLGPLYYINMPELYSTSFMTEALLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIFLAGV-P-PHM--MNP-MTLTIIYSTIFLGPVITMSSTNLLLMWVGLEFNLLAIVPLLMNKKNPR-STEAAMKYFITQATASMIILLAIVLNYKQLGTW--MFQQQTNSLILNMTLMALSMKLGLAPFHFWLPEVTQGIPLHMGLILLTWQKIAPLSILIQIYPLLNPTIILTM-AIMSIFMGAWGGLNQTQMRKIMAYSSIAHMGWMLAILPYNPSLTLLNLAIYIILTIPMFMALMLNSSLTINSI---SLLWNKTPAVLMMTSLILLSLGGLPPLTGFLPKWIIITELMKNNCLIMATLMAMMALLNLFFYTRLIYSTSLTMFPTNNSSKMMI-HQTKIKPNLMF-------STLAIISTMTLPLSPQMII-----MN-LYIVIFINTLLSLALILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTIKTTTMMTMAFILVTILSLGLAYEWTQKG--LEWTE-MSSVFFNLTLAFALSLLGTLMFRSHLMSTLLCLEGMMLSLFIMTSVISLNSNSMSSMPIPITILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIIFPSFMLLPLIWLSSPKKTWTNVTSYSFLISLTSL-TLLWQTDENYKTFS-IMFSSDPLSTPLIILTTWLLPLMLMASQNHLKKESLILQKLYISMLVSLQILLTMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALILIQNYIGTLNFTILSLTAHTMD-TSW-----SNNLLWLACMMAFLIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGSYGMIRISIILDP-LTKYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSFMGATMLMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMATWWLMASLANLALPPSINLMGELFIAISLFSWSNFSIILMGMNIIITGMYSMYMIITTQRGKLTNHMINLQPSHTRELTLMALHMIPIILLTINPKLITGLTM------MNIFTAS-ILLIFILLISPILIS---MSNLTKY-INFPLYTTMS-IKFSFIISLIPLLLFFYSNMEYMITTWHWMTMNSMKLTMSFKLDFFSILFTSVALFVTWSIMQFSSWYMHSDPNINRFIKYLTLFLITMLILTSANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMIWFSLNMNSWELQQIMFSNNN-DNLIPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPLTANNSNILTIMLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGMNQPHLAFLHICTHAFFKAMLFMCSGSIIHSLADEQDIRKMGSMTKAMPFTSSCLVIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALLITLIATS-MTAMYSMRIIYFVTMTKPRFPPLISINENNPDLMNPIKRLAFGSIFAGFIISYNIPPTNVQILTMPWFLKTTALIISVLGFLIALELNNLTMKFS--TNKTNPYSSFSTLLGFFPSIIHRIMPMMSLNPSLKTSLTLLDLIWLEKVIPKSTSTLHTNMTT--LTTNQKGLIKLYFMS---FLINI--ILIIILYTI---------NPEWSQ- +>Aotus_nancymaae_Mas_night_monkey +----MNQNLFTSFNVPV-ILGIPLVVLIILFPTTLIMPSN-KLINNRLSSLQQWLVQLTLKQMMMVHTNKGRTWSLMLLALISFIALNNLLGLTPYAFTPTTQLSMNLGMAIPLWAATVFMGLRFKTKASLAHFLPQGTPVPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLLGDTALTLMS-IYMSSSTITIIIIILLITLELGVALIQAYVFTLLVSLYLHDNSMPQLDISPWPMVILSMI-VALFYFIQLKLLNFTFHN-IPSSK-PMKTQKH-KMT-W-ELKWTKIYLP-LS-TYQ-----MFMNRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRAELGQPGSLMEDDHVYNVIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIISSVGSFISLTAVILMIFMIWEAFSSKRKVSTIEQLSTNLEWLYGCPPPYHTFEESTYVKTLAEKG-----MATPAQLGLQNATSPIMEELIAFHDHALMIIFLISSLVLYIISLMLTTKLTHTSTMNAQEIEMIWTILPAIILIMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYEDLAFDSYITPTYFLEPGEFRLLEVDNRTTLPMEADIRMLITSQDVLHSWAVPSLGVKTDAIPGRLNQAMLASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWASYLYIV--------MTHQTHAYHMVNPSPWPLTGALSAFLLTSGLIMWFHFYYTLLLATGLLASAMTMFQWWRDVVREGTYQGHHTPPVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPQTGGHWPPTGILPLNPMEVPLLNTAVLLASGVTITWAHHSLMEANRKESAQALLMTIALGAYFTYLQMSEYSETSFTISDGIYGSTFFMATGFHGLHVIIGTTFLATCYIRQQMYHFTSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTSPRKTHPLMKIINESFIDLPTPSNISSWWNFGSLLGICLIIQITTGLFLAMHYTPDTSTAFSSVAHITRDVNYGWMIRYMHANGASMFFVCLFLHIGRGLYYGSFLFLKTWNIGTILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFTFHFILPFIIAALATIHLLFLHETGSSNPSGMMSDPDKITFHPYYTAKDILGLIFLLLSLMSLTLFMPDLLTDPDNYTLANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALMLSILILMVIPMLHLSKQQSMMFRPITQTLFWTLVADLLTLTWIGGQPVEYPFVTIGQTASIMYFFIIITLMPLSALIENKLL---KW--------MF--------MINLLLLVIPALIAMAFLTLMERKILGYMQFRKGPNIVGPYGLLQPIADAMKLFTKEPLLPTTSATTLYVTAPTLALSIALLMWTPLPMPHPLNNFNLGLLFMLATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLHSLIVTQEHSWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFLATSHNITMPELYTINFVTKTVLLTSLFLWIRTAYPRFRYDQLMHLLWKKFLPLTLALCMWYISMPTLTSGI-P-PQT--MNP-LAYLIISFTILMGTMITILSSHWFLIWMGLELNMLAIVPILAKNTSPR-STEASTKYFLMQATASMVLLMAIFLNTLFSGQW--TINPSFNKILSTMMLIALVMKLGMAPLHFWLPEVTQGVPLTPAMLILTWQKLAPMSIILQIFPPMNLNTLLMI-SILSIMIGSWGGLNQTQLRKIMAYSSITHMGWMMAVLYYDPNITILSLIIYIFLTISTFMMFFMNSNLTTLSL---SHSWNKLTWMMPMIPLMMMSLGGLPPLTGFSPKWAIMQELTKNDNLIFPLTMAMLTLMNLYFYMRLSYSISMTMFPTSNNTKINW-QLKYMKPTPLL-------PPLMVASIFLLPVTPLMLMM----MN-LALTLATNILLALLLITITFWLPQLNMYAEKHNPYECGFDPTTSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQMNNLMLTVNMILTLLVILALGLAYEWTQKG--LEWIE-MPFIFINILLAYFMSLLGLLVYRSHLMSSLLCLEGMMLSLFIMATLTTLNMHLTLMYMMPVVLLVFAACEAAVGLALLVLISNLYGLDYVQNLNLLQCMLKIILPTIMMLPMMWLSKTHMMWINMMISSLLISAFTL-MSLYMPN-ISCNLS-LNFFSDPLTSPLLTLTAWLLPLMVLATQQHLYNNPLPRKKLYMSMLILLQISLIMTFTATELILFYILFETTLIPTLIIITRWGYQPERLNAGSYFLFYTLAGSLPLLITLLYHLSNLGSLNMLTMMMSIKETP-LSW-----TNNIMWLGCMMAFMVKLPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIIPILNP-LTEKMSYPFLILSLWGMVMTS--SICLRQADLKSLIAYSSVSHMALVILAILIQTPWSFTGAMILMIAHGLTSSLLFCLANSNYERIHSRTMMFTRGLQTLFPLLALWWLLANLANLALPPTINLMGELFTILASFSWSNFTIMFTGFNMLITALYSLHMFTSTQRGPLTYSTSNVKPLFTRENTLMIMHMAPILLLTLDPKTIMGLTP--------MHSSL-ILMTLIPLLAPITIT---LINPHKN-SLYPHYVKLA-IIYALTISILSTTIFIFTGQESMISNWHWMTIQTIKLSMSFKLDFFSMMFTPVALFVTWSIVEFSMWYMSSDPNINQFLKYLLIFLITMLILITANNLFQLFIGWEGMGIMSFLLISWWHGRTDANTAALQAILYNRIGDIGFILAMAWFFLYSNSWDFQQMFILDST-SNSFPLMSLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLIIRFHPLIENNLLTQTLILSLGAITTLFTAICAITQNDLKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLSAGSIIHSLNNEQDIRKMGGLFKTLPFTASSLVIGSLALMGTPFLTGFYSKDLIIETANTSYTNAWALTTTLVATS-LTAMYSIRIISHTMTGHPRFSTLISINENNPQLMNPINRLALGSIFAGFLISSCIPPTSQPQVTMPHYLKLMALSVTILGLFLAMELSLMTNNMK--LSTPVKTFYFSNMLGFYSITTHRINPHSSLATSQNFTSTLLDLFWFEKTMPKLTMQTQISIST--TASTQKGLIKLYFLS---FFIPP--TLALILTI----------------- +>Petaurista_hainana_ +----MNENLFASFITPT-LMGLPIIVLIISFPNILFPSPN-RLVNNRLVSFQQWLVQLVLKQMMAMHNLKGRTWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRHKTKASLAHFLPQGTPIPLIPLLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTS-ISPPTAMITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIMSMF-LALFILFQSKISNHLYPS-NPSPK-NIKLMTQ-NTP-W-EKKWTKIYSP-LS-LPPH----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDSTWAKIHFTVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMIMIFMIWEAFASKREVLTVELTTTNLEWLHGCPPPYHTFEEPTYVKA----------MAYPFELGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINDPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMGLPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFENWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSNSLLMLGLLTNTLTMYQWWRDIIREGTFQGHHTTIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPVGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALTITIALGLYFTLLQASGYFETSFTISDGIYGSTFFMATGFHGLHVIIGSTFLSVCLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKAHPLIKIVNHSFIDLPTPSNISAWWNFGSLLGLCLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYIHANGASMFFICLYLHVGRGLYYGSYTYFETWNIGVILLFTIMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIVAALVMVHLLFLHETGSNNPSGLISDSDKVPFHPYFTIKDILGALLLTLSLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILMLFPILHMSKQRGMMFRPLSQCLFWILAADLFTLTWIGGQPVEHPFIIIGQTASILYFTIILIILPLASMLENKLL---KW--------MF--------LINLLLLIVPVMLAMAFLTLVERKMLGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPSTSSTALFIIAPSLALTLAITMWIPLPMPQPLINMNLGVLFILATSSLAVYGILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQQYMWLLLPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFMGALLNPPIPETYTFSFTIKTLILTSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPITMACV-P-PQT--MNP-LTSSTIYFTLFLGTLITLISSHWLTIWVGLEMSLLSIIPILINKANPR-STEAASKYFLVQATASMILMMAVIINFMNSGQW--TITNPINQVSSLMITMALSMKMGLAPFHLWVPEVTQGVPLMSGLILLTWQKIAPISIMFQIAPSINSSLIMTM-AMLSIMLGGWGGLNQTQLRKILAYSSIAHMGWMMAIITFNPMLTIFNLVIYILLTFNMFLLFYYNKKTTTLSL---SNSWNKSPLLISMTHAVLMSLGGLPPLTGFSPKWMIIKELVSNNNVIISTLMAVTALLNLYFYMRLIYSTSLTLFPSYNNTKIKW-QFENTKMMPFM-------STVTILSSLALPLMPMLSILN---MN-LLITLTVNITIALLLVSVAFWLPQVNTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLMLMLTVALMLILVLTLGLAYEWIQKG--LEWIE-MPLITLNVFLAYLTSLLGMFIYRSHLMSSLLCLEGMMLSMFILSTLMILNSHFTLSFMLPIILLVFAACEAAIGLALLVMVSNTYGLDYVQNLNVLQCMLKIILPTILLAPTMWFSKNSLIWINSSIHSLMISFIVL-LSLSHVDDNNLILS-PSFFSDPLSTPLLILTAWLLPLMIMASQNHLAKEPLVRKKLYILMLISLQLFLIMTFSASELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLAALIYIQKSLGSLNFLISFYEPNSLP-FSW-----TNNILWLACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITTILHP-ITSTMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFMGATALMIAHGLTSSMLFCLTNTNYERIHSRTMILARGLQSILPMMAMWWTLASLTNLALPPTINLIGELFIISSSFSWSNITIILMGMNMLITALYSLYMLITSQRGKFTYHMSNINPSFTRENTLMLMHILPLILLSINPKVILGQLY------MNLMSSL-TLMSLITLTFPILLA---PTKLYET-NKYPNYVKTS-TMWALMFCFLPTLMFINSNCELIISNWHWMTIQTINLTMSFKLDYFSMMFMPIALFVTWSTMEFSMWYMHSDPHINRFFKYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILTMAWFLMNSNSWELNQLFML--D-TPLLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALPHSSTMVVAGIFLLVRFYPMIENNETAKTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGVNQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKAMPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALAITLIATS-LTAIYSTRIIFFALMGQPRFSTLTPINENNPLLINSIKRLLIGSIFAGFLLSHNIPPMNIPLLTMPTYLKTTALSMTILGFTLAMELNQLTLNLK--TNFYSHPSKFSNMLGYFTTTIHRTYPYLNLHLSQKTASTLLDLIWMEKSIPKLIANFQSAASI--TTSNQKGLIKLYFLS---FLISI--ILALTFLT---------YFPE---- +>Monachus_schauinslandi_Hawaiian_monk_seal +----MNENLFASFATPT-MMGLPIVILITLFPSILLPSPD-RLINNRLISIQQWLIQLTSKQMLSVHNYKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVIMGFRHKMKTSLAHFLPQGTPLLLIPMLVIIETISLLIQPMALAVRLTANITAGHLLIHLIGGATLILMD-INTATASITFIILMLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSTMILSMI-LTLFIMFQLKISKHYFPM-NPKLK-QMSPLKS-NTP-W-EEKWTKIYSL-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQIPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFTLDDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFASKREVATVELTTTNIEWLHGCPPPYHTFEEPTYVVL-K--------MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMYLLLLGLTTNTLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGIYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFMRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSLIDLPAPSNISMWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSITHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFTETWNIGIILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFIMPFMVLALAAVHLLFLHETGSNNPSGIPSNSDKIPFHPYYTIKDILGALLLILILMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIIPLLHTSKQRGMTFRPMSQCLFWLLAADLITLTWIGGQPVEYPYTTIGQLASILYFTIPLVLMPITSIIENNIL---KW--------MF--------MINIMSLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAMKLFTKEPLRPLTSSTFMFIMAPILALALALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIMMNIFTTLLFFGAFHTPYMPELYTINFTMKTLALTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIITASI-P-PQT--MKP-HILAIIMTTVMSGTMIVLMSSHWLLTWIGFEMNMLAIIPILMKNYNPR-AMEASTKYFLTQATASMLLMMGIILNLMFSGQW--TMSKIPNPIASSLMTIALAMKLGVAPFHFWVPEVTQGISLPSGMILLTWQKIAPLSILYQISPSINPKLMIPM-AIASVLVGGWGGLNQTQLRKILAYSSIAHMGWMAVILTYNPTLMLLNLLIYIMMTLSTFMLFIYNSSTTTLSL---SQTWNKLPLMTSLILMLMLSLGGLPPLSGFMPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTTLTMFPSTNNTKMKW-QFESTKKIILL-------PPLIITSTMLLPMTPMMLILE---MN-MMLALFTNTALASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHTNNLTTMLTMALLLISLLAASLAYEWTEKG--LEWTE-MTMVYANIFLAFTTSLMGLLMYRSHLMSSLLCLEGMMLSLFVMMTVTILNNHFTLASMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIILPTLMLMPLTWMSKPNMIWINTTTYSLLISLISL-SFLNQLNDNYMNPS-LLFFTDSLSTPLLALTTWLLPLMLMASQFHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLVPTLVIITRWGNQTERLNAGMYFLFYTLVGSLPLLVALLSIQNNMGTLNFLMLQLWAQPTL-NSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMLLNP-LTSSTAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQGLLPLMATWWLMASLTNLALPPTINLIGELFVVMASFSWSNITIILMGTNIIITAMYSLYMLITTQRGKYTHHIKNIKPSFTRENALMTLHLMPLLL-------------------MNLFTSS-LITSLLMLTLPIVLT---STPIYKN-KLYPQYVKTT-ISYTLMISMIPTTMFIYSGKEMIISNWHWMTIQTMKLTLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFIMAMAWFLINLNTWELQQIFITYHD-NLNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNMTVQTTTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLYKALPFTTTSLITGNLALTGMPFLTGFYSKDLIIETANTSYTNAWALLLTLIATS-MTAAYSTRIMFFALLGQPRFNPMIMINENNPLLINPIKRLLLGSIFAGYLILHNITPTTIPQTTMPYYLKLMALIMTLLGFILALELNLMSQSFK--LKYPSNLFKFSSLLGYFPTITHRYMPEMNLSASQKLASTLLDMTWLENVLPKSISHFHMKWST--IISNQKGLIKLYFLS---FVITL--ILALMMI----------NFHE---- +>Mustela_nigripes_black-footed_ferret +----MNENLFSSFTTPT-MMGLPIVILITMFPGIMFPSPN-RLINNRLISIQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTVTAMITFSILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-VTLFFMFQLKLSKYNFPE-NPEPK-LVAASKS-TTP-W-EKKWTKIYFP-HS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMLGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGSINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDVWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVLTVELTSTNIEWLHGCPPPYHTFEEPTYVLS-K--------MAYPFQMGLQDAASPIMEELLHFHDHTLMIVFLISSLVLYIISVMLTTKLTHTSTMDAQAVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTIMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLTTSGLVMWFHYNSLSLLTLGTTTNVLTMYQWWRDVVREGTFQGHHTPTVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITISLGLYFTVLQASEYYEAPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLSYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLTKIINNSFIDLPAPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYTFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGAMLLILMLMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFMILLVLMPTISIIENNML---KW--------MF--------MINTISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFVMAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYTNIIMMNILTTILFFGAFHTPYLPELYSINFTMKTLLLTTSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASI-P-PQT--MKP-PILTIIMFTIISGTIMVLMSSHWLTIWIGFEMNMLAIIPILMKKFSPR-AIEAATKYFLTQATASMLLMLGIIMNLLLTGQW--TALNILNPIVSNMMTVALSMKLGLSPFHFWVPEVTQGVPLMSGMILLTWQKIAPLSVLYQMAPSMNTHLLMIM-AFMSVLIGGWGGLNQTQLRKILAYSSIAHMGWMIAVTTCNPTLMLLNLTIYIMMTLGTFMLFTFSSSTTTLSL---SLTWNKLPLITSLILIIMLSLGGLPPLSGFMPKWMIIHELTKNNMITAAMFMAITALLNLYFYMRLTYATALTLFPSTNNMKMKW-QFESTKNTTLL-------PPLIVMSTMLLPLTPMMPTLF---MN-MMLTMLINVSLASLLILIAFWLPQLNIYTEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSINLKTTLTMALALISLLAASLAYEWTEEG--LEWSE-MSVVYINIFLAFTLSFMGLLIYRSHLMSSLLCLEGMMLSLFIMMTVTILANHFTLASMTPIILLVFAACEAALGLSLLVMISSTYGTDYVQNLNLLQCMLKIIIPTTMLIPLTWLSKPNMIWINTTAHSMLISLISL-TYLNQLTDNSLNFS-LLFFADSLSTPLLVLTTWLLPLMLMASQHHLSKETLTRKKLYITMLVMLQLFLIMTFTATELIMFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLWLQNNLGTLNLLIMQYWAQPLP-NSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMLLNP-LTSYMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAVLIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLVGELFVVMASFSWSNITIALMGVNITITALYSLYMLITTQRGKCTHHIKNIKPSFTRENSLMALHLLPLLLLSLNPKIILGYIY------MNLLTSS-VLVTLLMLTFPIMMT---STTMYAN-KSYPQYVKTA-TSYAFMISLIPTMMFLHLGQDTMISNWHWITIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGLILAMAWFLMNLNTWDLQQIFMTNNE-NLTIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEYNKTIQTITLCLGAITTLFTTICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSCTNAWALLLTLVATS-MTAAYSTRIMFFALLGQPRFNPIITINENNPLLINSIKRLLFGSIFAGFLISHNLTPTTTPQMTMPHYLKMMAIAVTILGFILALELNLTMQSLK--FKYPTNLFKFSSMLGYFPTIIHRLMTKTNLLMSQKSASTLLDMIWLEKILPKSISHFQMKSSM--IISSQKGLIKLYFMS---FMLTL--ALSLLTL----------NFHE---- +>Phocoena_phocoena_harbor_porpoise +----MNENLFAPFMVPV-MLGIPITTLIIMFPTLLFPTPN-RLISNRTVAIQQWLTKLTSKQLMITHNPKGQTWSLMLISLFLFIASTNLLGMMPHSFTPTTQLSMNLGMAIPLWAGAVVMGFRNKTKMSLAHLLPLGTPTFLIPMLVMIETISLFIQPLALAVRLTANITAGHLLLHLIGSATLVLTS-ISPPMALITFTILTLLVILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMM-FTLFALLQLKISKHLYSP-SPKPM-FTKTQEQ-QAP-W-NHTWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGSLIGDDQIYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSVVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDVILHDTYYVVAHFHFVLSMGAVFAIMGGFVHWFPLFSGYTLNSTWTKIQFAILFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSAVDLTSTNLEWLNGCPPPYHTFEEPAYVNP-NIQE-----MAYPFQLGLQDATSPVMEELLQFHDHALMIVFLISSLVLYIITLMLTTKLTHTNTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRVVLPMQMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSMILLTLGLLTNTLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPAGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHTLQALLITIMLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIICFMRQLTFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNALIDLPAPSNISSWWNFGSLLGLCLITQILTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLYIHIGRGLYYGSYMFQETWNIGVLLLLTVMATAFVGYVLPWGQMSFWGATVITNLLYAIPYIGSTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALMIVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGALLFILTLLALTLFSPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLVLIPMLQTSKQRSMIFRPFSQLLFWTLVADLLTLTWIGGQPVEHPYIIVGQLASVLYFLLILVLMPTASIIENKLL---KW--------MF--------MINILMLILPILLAVAFLTLVERKILGYMQLRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPVLALTLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLNTAQEKLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGAFHNPHMPELCTMNLIIKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHVSLPIMTAGI-P-PQT--MNP-LIFITLLTTLILSTMIVMISSHWLFAWIGLEMNMMAIIPIMMKKPSPR-ATEASAKYFLTQATASTLLMLAVTINLTHSGQW--TIMKLFDPTASILMTMALAIKLGLSPFHFWVPEVTQGIPLTTGLILLTWQKIAPISILYQISPSINLHLMITM-SFLSILIGGWGGLNQTQLRKVMAYSSIAHMGWMTTILLYNSTLTLLNLLVYIIMTFTMFMLLIQNSTTTTLLL---SQTWNTMPVMTTFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPTLMAITALLNLYFYMRLAYSTALTLFPSTNNMKMKW-QFHPTKQMTLL-------PTAIVLSTMLLPLTPTYFILL---MN-FLLALLTNTTLALLLMLIAFWLPQLNTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLKTMLLMTLFLISLLAASLAYEWTQKG--LEWDK-MSLIHINILMAFTMSLVGLLMYRSHLMSALLCLEGMVLSLFILMTLTILNSHFTLANMVPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKSSFIWINTTAHSLLISFTSL-LLLNQFNDNTLNYS-LMFFSDPLSTPLLMLTMWLLPLMLMASQSHLLKEPLTRKKLYITMLVMLQALLIMTFTAMELIMFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALTYLQNTLGTLNFLLLQYWTQPLP-TSW-----SNIFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTGHMAYPFLALSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFFPLMATWWLLASLTNLALPPTINLIGELLVIMSTFSWSNLTIILMGANIVITALYSLYMLIMTQRGKYTHHINNLIPSFTREHTLMALHMIPLLLLSLNPKIILGPLY------MNLFTSS-TLLMLLMLIAPVMAS---STNLYKT-NDYQHYVKNM-TMSAFIISLIPTTMFIHTNQDVLISNWHWITIHTFKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMYSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGVMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLSNTNSWDLQQMFMLNQN-PSNLPLMGLTLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFSPLMENNKLIQTMMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTMGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALITGCLALTGTPFLTGFYSKDPIIEAATSSYTNAWALLLTLLATS-LTAIYSTRIIFFTLLEQPRFPPLMNINETNPMLINPIKRLLIGSIFAGFILSNNMPPMTTPLMTMPLHLKLTALMVTILGFTIAFEINTYSKNLK--YPRLSSATNFSALLGYFPAIMHRLPPHLILTMSQKLATSLLDLAWTEIILPKTMTFIQLKASL--LTSNQKGLIKLYFLS---FLITM--ALAMLLF----------NYPG---- +>Macroscelides_proboscideus_ +----MNENLFTSFITPT-LVGLPMTVIIIAFPSILFPQPK-RLINNRWTTIQQWMINLILKQMMSMHNIKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVIMGFRNKPKTSLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLILMS-ISTTTATITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTTPWFTVIMSML-ITLFILFQTNTSKFITPL-DPINK-NPKSTTK-TNP-W-DTKWTKIYLP-HS-LHQH----MFINRWLFSTNHKDIGTLYLIFGTWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHSGASVDMTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGLVHWFPLFTGYTLNETWAKTQFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTLSSTGSFISMVAVILMVFIVWEAFASKREVKTVELTMTNIEWINGCPPPYHTFEEPAFIMN-PDKKG----MAYPLQLGLQDALSPIMEELIYFHDHTLMIVYSISSLVLYLISSMLTTNLTHTITMDSQEVEMIWTVLPALILILIALPSLRILYMMDEIYSPVMTVKTMGHQWYWSYEYTDFTDLSFDSYMIPTNELTPGGLRLLEVDNRVVLPADVPIRMLISSEDVLHSWAVPALAVKTDAIPGRLNQATLSSTRPGLFYGQCSEICGSNHSFMPIVLEIVPLKYFDNWTSTL-----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLVMWFHYNSLLLLSTGLFCNTLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGTCWPPMGIHPLNPLDIPLLNTAILLSSGVTITWAHHSLMEGKRSHMIQALFITILLGVYFTLLQASEYYESSFTISDGIYGSTFFMATGFHGLHVIIGSTFLTVCFMRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLLKILNHSFVDLPAPSNISSWWNFGSLLGMCLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYVHANGASLFFICLFIHAGRGIYYGSYLYSETWNIGVVLLFITMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGSTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPLGLISDSDKIPFHPYYTIKDLLGMLLTILLLTGLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVMSILILAIMPLLHTSKHRSLMFRPISQCLFWILVADMLTLTWIGGQPVEDPFITIGQVASILYFLLILVLMPIAGLIENHLI---KL--------MY--------LINLATLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPIGLLQPIADAIKLFIKEPLYPATSSTLLFITAPMLALTLALIMWMPIPLPISLINMNLGLLFMLAMSSLAVYSLLWSGWASNSKYALIGALRAVAQTISYEVSLAMILLPIIIMSGSFTLSTLITTQQQMWLIIPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTALFLCPHFIPSMPEYFSFNFMIKTLTLTTCFLWVRASYPRFRYDQLMHLLWKNFLPLTLSLCMLYIAMPIMFACL-P-PQT--MNP-ITFALITFTLIMGSVLTMFSSHWLTAWLGLEMNLFAMVPLMIKPHNPR-SIEGSTKYFLTQATASMLLMVSVMINFMNSGQW--SITHMTNQFSSFLMVLALLTKLGMSPFHFWVPEVLQSTSLMTGTILLTWQKLAPLSIMYQIAPSVDFYILMTS-ATASIMLGGWGGLNQTQLRKIMAYSSITHMGWMTAIITFNPSITLLNLIIYIIMTTTLFMLFITNQSTTLISL---ATKWNKTPILMSMVFITLMSTGGLPPFSGFIPKWLIIQELTKNNNLIIPLIMSILTLLNLYFYMRLAYSTTLTMFPTSNNAKLSW-LYANTNHKTTL-------STLFMISNLLLPITPMLTFMN---MN-LLLSLLTSLSLAILLVIIAFWLPQLHTYSEKSTPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAVQMSDLKLMLTMALLLIIILALGLAYEWTQKG--LEWTE-MSLMTMNILLAFFISLMGMMMYRSHIMSSLLCLESMMLSLFMLATVLTLDMSFITMTIIPMTLLVFAACEAAIGLSLLVMVSNTYGLDYVQNLNLLQCMLKIMIPTIMLLPLTWLSSKQFLWINTTMHSFMISLISL-SLLTLMSEPLNAHS-TLFFSDALSTPLLILTTWLLPLMLMASQYHLASDSLTRKKLYISMLILLQLFLIMTFTSSELILFYIMFEATLIPTLVIITRWGNQNERLNAGVYFLFYTLMGSLPLLIALISIQNSMGSLNIMMLQYWNKPLD-STW-----SPNFLWLACMMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTIILEP-ATKTMAYPFIMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVMIQTPWSFMGATTLMIAHGLTSSVLFCLANSNYERTHSRTMILARGLQTILPLMATWWIMASLANLALPPSINLIGELLIMTSSFTWSNLTILLLGLNMFITALYSLYMLIMTQRGNTPYHTLTMKPSYTRENALMTLHLIPLLLLILNPTIILGTTY------MNMFHTF-ILLTLLILMIPLIMS---FSNLYKT-TSYPNYVKMT-IQYAFLTSTIPIMTMLISGQESIISNWHWMTIQSLNLSMSFKMDYFSLMFIPVALFVTWSIMEFSMWYMHSDPNINRFMKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRSDANTAALQAVLYNRIGDIGLILSMAWFMSNCNSWELTQIFSHN-D-ISITPLLGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPILTNNPLMQTLILCTGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKSLPFTTSALTIGSLALTGMPFLTGFYSKDLIIETANLSHTNAWALMITLMATS-MTAIYSTRIIFFVFLGQPRFQTMITSNENNTNLTNPIKRLALGSLFAGYLLSNLIPPMSTPELTMPFGLKTTAALVTIMGFTLAMELNSFTLNLK--LNQPHSTYNFSNQLGYFPTTIHRLPTSTGLNTSLNLATTTLDLSWLENIIPKNIATMHKAAST--KTSNQKGLIKLYFMS---FLITI--TLGLILVI----------------- +>Octodon_degus_degu +----MNENLFSSFITPT-MLGMPIAIIIIMFPAMLYPNPK-RLINNRVVALQQWLIKLILKQMMLIHSTKGRTWSLMLISLILFIGTTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVILGFRHKTKMSLAHFLPQGTPILLIPMLIVIETISLFIQPMALAVRLTANITAGHLLMHLIGGATSALLT-ISPPAALMTFIILLLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITILSMI-ITLFVMFQTKTSMHSFFT-NPQQS-HLKMMKQ-KTP-W-EKKWTKIYSP-LL-SHQQY---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLHSTWAKIHFFIMFTGVNITFFPQHFLGLSGMPRRYSDYPDAYTFWNTVSSMGSFISLMAVMIMIFMVWEAFASKREVMTTELTSINLEWLHGCPPPYHTFEEPTYIKT-L--------MAYPYQLGFQDATSPIMEELLHFHDHTLMIVFLISTLVLYLISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEVNNPALTVKTMGHQWYWSYEYTDYEELNFDSYMTPTTDLKPGELRLLEVDNRVVLPMGMPVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQAILTSSRPGLFYGQCSEICGSNHSFMPIVIEMVPLKTFENWCSSML----------MTHQTHAYHMVNPSPWPLTGALSAILLTSGLIMWFHFNSTTLLSLSMLTNLMTMYQWWRDVVREGTYQGHHTSIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGYWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKQMTQALAITIILGAYFTLLQVSEYFEASFTISDGIYGSTFFVATGFHGLHVIIGSTFLMTCLLRQLYFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYRWGS--MTNIRKSHPLIKIINHSFIDLPAPSNISAWWNFGSLLGVCLMLQIITGLFLAMHYTADTTTAFSSVTHICRDVNYGWLIRYLHANGASMFFILLYLHIGRGIYYGSFTFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPNLVEWIWGGFSVDKATLTRFFAFHFILPFIITAMVMIHLLFLHETGSNNPSGLNSDSDKIPFHPYYTIKDILGFLFMLLTLMTLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILMLFPMLHLSKQRSMSFRPLSQCLLWALVGNLIILTWIGGQPVEHPFITIGQLASAIYFFIILILMPTTSLMENKLL---KW--------MY--------MINFLLLIVPILLAMAFLTLMERKMLGYMQLRKGPNIVGPYGILQPMADALKLFIKEPLHPSTSSILLFTIAPSLALTLALSMWIPMPMPHPLINMNLGALFILATSSLAVYSILWSGWASNSKYALFGALRAVAQTISYEVTLAIILLSILILNGSFTLSTLMTTQKNIWLILPTWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNILMMNALTTIIFLNSLPTSSNPEIHSTNFMIKTLILTALFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISMPIFMCSI-P-PQSM-MKI-MLMTIIYTTLIMGTLITLISSHWLLMWIGLEMSMLAIIPILMNKSNPR-STQPATKYSLMQPTASMILLLSIILTMMYSGQW--SIFYSNNTTISLILTTSLIMKLGLAPFHFWVTEVTQGTSLLTGMVLLTWQKIAPLSILLQNFPTINQPLILAS-AVLSTLLGGWGGLNQTQLRKILAYSSIAHMGWMMAVLFYNPSISILNLVIYIMLTISTFSILHTNNNLTTLAL---SHMWSTSPPTIIIILMNLLSLGGLPPLTGFAPKWITIQEMVKNNNITISIIMTMMALLSLYFYMRLTYSTTLTLFPSTNSSKFKW-FFHNNKKMIML-------APLITLSTMLLPMTPLLTTLS---MN-IVMSLITNYTLTMILITIAFWLPQLNIYTEKANPYEFWFNPPXXXXXPFSMKFFLIAITFLLFDLGNALLLPLPWALQTLTLNLTTWPAICLILILSLGLTYEWLQKG--LKWAE-MTSILFNIITAFIISFMGIMIYRSHMMSSLLCLEGMMLSMFILGVTIMLNSHYILAFSTPIILLVFAACEAAVGLALLVMISNTYGIDYVQNLNLLQCMLKIIMPTIMLIPTVWLSNTSSMWINTTSYSMLIALISL-SYLNNMDTTNMNHS-LTLSSDPLSTPLLILTTWLLPLMIIASQHHLKNETETRKKTYISLLISLQTFLILTFSATEMIMFYILFETTLIPTLIIITRWGNQTERMNAGLYFLFYTLIGSLPLLITLIYIQNQMGTLNFLLFNYYKPMLD-STW-----SNNLMWLACTMAFMIKLPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGLMRILQLLEP-LTNNMAYPFLLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIWIQPPWSLMGATSLMIAHGLTSSLLFCVANSNYERVHSRTLLLTRGLQMLFPLMGMWWIIASLTNLALPPSINLFGELLIVMSTFSWCNLTIILTGLNILITALYSLYMLISTQRGKLPYHIHNMPPTFTRENILMSLHIIPLLLLTLNPKIVLGNLY------MNLFNSS-FIMTLTILTFPIITP---LTNLYKK-SHYPGYIKTI-ISISFFLSLIPTLTMFYSGQEATMYNWSWLNIQTFHLNINIKLDYFSILFMSVALFVTWSIMEFSLWYMHSDPNMDKFFKYLLLFLITMMILVTANNLFQLFIGWESVGIMSFLLIGWWHGRSDANTAAMQAVLYNRIGDIGFILSMTWFLLYSNSWDLQQIFITQEG-TDIIPMLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMQNNQSLQTLCLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLHKTLPITSSSLMIGSMALTGIPFLTGFYSKDLIIESATTSYTNAWALVITLIATS-LTAVYSTRIIFFALLNNPRFNFSPSMNENDPTMINPIKRLAISSILAGFFISYNIPITNIPQMTMPPYMKFAAILSTVLGFMIALELNVMTKNLK--SNYSTKLTNFSNMLGYFPPLIHRTSPFINLSTGQNLASLMIDLIWLEKSLPKTISQTQAMASM--YTSTQTGLLKLYFLS---FLISM--TLALTLLF----------------- +>Arctocephalus_forsteri_New_Zealand_fur_seal +----MNENLFTSFASPT-MMGLPIVTLIILFPSMLFPSPG-RLINNRFTSIQQWLIQLTSKQMMLIHNHKGQTWTLMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVAMGLRHKTKASLAHFLPQGTPSPLIPMLVIIESISLLIQPMALAVRLTANITAGHLLIHLIGGATLALTN-ISMITALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSTTIVSMI-LTLFIIFQLKISKHHFPM-SPELK-PLSTSKT-NTP-W-EKKWTKIYLP-LS-LPLQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSLVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFMLDSTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFMIWEAFASKREVETIELTSTNMEWLHGCPPPYHTFEEPTYIVS-K--------MAYPFQMGLQDATSPIMEELTHFHDHTLMIVFLISSLVLYIISTMLTTKLTHTSTMDAQEVETVWTILPAIILIMIALPSLRILYIMDEINNPSLTVKTMGHQWYWTYEYTDYEDLSFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVIESIPLSCFEKWSASMLQ---------MTHQTHTYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTHLLLLGLMTNTLTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITILLGLYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKMHPLAKIINNSLIDLPAPSNISAWWNFGSLLAVCLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTLMETWNIGIILLFTIMATAFMGYVLPWGQMSFWGATVITNLLSAVPYVGTNLVEWIWGGFSVDKATLTRFFAFHFILPFVASALVMVHLLFLHETGSNNPSGVSSDSDKIPFHPYYTIKDILGALLLILILMLLVMFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRGMMFRPISQFLFWLLVADLLTLTWIGGQPVEHPFIAIGQLASILYFTILLILMPIAGIIENHIL---KW--------MI--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSASMFITAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTTLFLGAFHSPYMPELYTINFTLKTLMLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPVITASI-P-PQT--MKP-PIFIMIMTTVVLGTMIVLTSSHWLMIWIGFEMNMLAIIPILMKNFSPR-ATEASTKYFLIQATASMLLMLGIIINLTTSGQW--AILKLPSPTASNLLTIALAMKLGMAPFHFWVPEVTQGTPLSSGMILLTWQKIAPLSVLYQITPSTNPNLLITM-AIASMLVGGWGGLNQTQLRKILAYSSIAHMGWITIIVMYNPTLMLLNLMIYITMTLGTFMLFMYNSSTTTLSL---SHTWNKLPFMTSLILVLMLSLGGLPPLSGFVPKWLIIQELTKNDMIILPTFMTITALLNLYFYMRLSYTTALTLFPSTNNMKMKW-QFENTKKMTLL-------SPLIIISTMLLPMAPMMSILD---MN-MILALLTNTILASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHANNLMTTLTMALVLISLLAASLAYEWTEKG--LEWTE-MSMVYFNIFMAFTVSFVGLLMYRSHLMSSLLCLEGMMLSLFVMMSMTILNNHFTLASMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTIMLMPVAWMSKPHMIWINTTTYSLLISLTSL-PLLSQLNDNSLNSS-LLFFTDSLSAPLLTLTTWLLPLMLMASQLHLSKEPLARKKLYITMLILLQLLLIMTFAATELIMFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYMQNNMGTLNFLVAQYWTQTLP-NSW-----SNILLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-LTSFMAYPFMMLSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPLSYMGATALMIAHGLTSSMLFCLANSNYERTHSRIMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELLVVMASFSWSNATIILMGVNIIITALYSLYMLITTQRGKHTHHIKNIKPSFTRENTLMMLHLVPLLLLSLNPKMILGPLY------MNLFAPF-TIMTLFMLTMPIILT---STPIYES-KLYPQYVKTT-ISYAFMTSMIPTMMFISSGQEMIISNWHWMTIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSIWYMSSDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRSDANTAALQAILYNRIGDVGFIMAMAWFLTNLNTWDLQQIFMIHHN-DLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNTVMQTTTLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMIVTIGIGQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKPMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSNTNAWALLLTLMATS-MTAAYSTRMMFSTLLGQPRFNPTISVNENNPLLINPIKRLLLGSIFAGYLMTLNIPPTMIPQLTMPHHLKLTALTVTLLGFTLALELSTTSLNLK--FKYASNLSKFSNLLGYFPTIIHRLVPTMNLAAGQKLASTLMDMIWLEYLLPKSISHLNMKSSI--TISNQKGLIKLYFLS---FMITL--TLALILTT--------TSFHE---- +>Hydrurga_leptonyx_leopard_seal +----MNENLFASFTTPT-MMGLPIVILIILFPSILFPSPN-RLVNNRLISIQQWLIQLTSKQLLSIHNYKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLMD-ISTATASITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFIVILSMI-LTLFIMFQLKLSKHHFLT-NPEPK-QTLPPKS-NTP-W-EEKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQIPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFTLDDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFASKREVATVELTTTNIEWLHGCPPPYHTFEEPTYVVL-K--------MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVILPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMYLLLLGLTTNTLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFMRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSFIDLPTPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFTETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFILPFVVSALAAVHLLFLHETGSNNPSGIPSNSDKIPFHPYYTIKDILGALFLILTLMLLVLFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIIPLLHTSKQRGMMFRPISQCLFWLLVADLLTLTWIGGQPVEHPYITIGQLASILYFTILLVLMPITSIIENNIL---KW--------MF--------MINIMSLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSTSMFIMAPILALALALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASDSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIMMNIFTTLLFFGAFHAPYMPELYTINFTVKTLMLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIISASI-P-PQT--MKP-YILVIIMMTVMSGTMIVLTSSHWLLTWIGFEMNMLAIIPILMKNYNPR-AMEASTKYFLTQATASMLLMMGIIINLMFSGQW--TISKIPNPIAAGLITIALAMKLGMAPFHFWVPEVTQGISLPSGMILLTWQKIAPLSVLYQISPSINPKLMITM-AIASVLVGGWGGLNQTQLRKILAYSSITHMGWMAVILTYNPTLMLLNLMIYIMMTLSTFMLFIHNSSTTMSSL---SQTWNKLPLVTSLILMLMLSLGGLPPLSGFTPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTTLTMFPSANNMKMKW-QFESTKKIILL-------PPLIITSTMLLPMTPMMSILE---MN-MVLALFTNTILASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHTNNLTTMLTMALLLISLLAASLAYEWTEKG--LEWTE-MTMVYANIFLAFITSLMGLLMYRSHLMSSLLCLEGMMLSLFVMMTVTILNNHFTLASMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIILPTMMLMPLTWMSKPNMIWINTTTYSLLISLISL-PFLNQLNDNCMNLS-LLFFTDSLSAPLLTLTTWLLPLMLMASQSHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLFIQNNMGTLNFLMLQLWTQPMS-NSW-----SNALLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMLLNP-LTNSMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQVLLPLMAAWWLLASLANLALPPTINLIGELFVVMASFSWSNITIILMGINIIITALYSLYMLITTQRGKYTHHIKNIKPSFTRENALMTLHLMPLLLLSLNPKIILGPIY------MNLFTSS-IIMSLSMLTFPVILT---STPIYKS-KLYPQYVKTT-ISYAFMISMIPTTMFIYSGKEMIISNWHWMTIQTMKLTLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPHINQFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTASLQAVLYNRIGDVGFIMAMAWFLINLNTWEFQQIFITHHD-NLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNTTVQTATLCLGATTTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLSDEQDIRKMGGLYKVLPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-MTAAYSTRILFFALLGQPRFNPMITTNENNPHLINSIKRLLLGSIFAGYLISQNITPTTIPQMTMPYYLKLTALTVTLLGFTLALELNLTSQSLK--LKYPSNLFKFSNLLGYFPIIIHRYVPKMNLSASQKLASTLLDMIWLESVLPKSISYFHMKSST--TVSNQKGLIKLYFLS---FVITL--ILALTMT----------NFHE---- +>Mus_musculus_domesticus_ +----MNENLFASFITPT-MMGFPIVVAIIMFPSILFPSSK-RLINNRLHSFQHWLVKLIIKQMMLIHTPKGRTWTLMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVITGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISSM-ITLFILFQLKVSSQTFPL-APSPK-SLTTMKV-KTP-W-ELKWTKIYLP-HS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGFTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLIMIFMIWEAFASKREVMSVSYASTNLEWLHGCPPPYHTFEEPTYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSITLLTLGLLTNILTMYQWWRDVIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGISPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITIMLGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNMRKTHPLFKIINHSFIDLPAPSNISSWWNFGSLLGVCLMVQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGLYYGSYTFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILIMFLILMTLVLFFPDMLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWILVANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIEDKML---KLYP------MF--------FINILTLLVPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPTLSLTLALSLWVPLPMPHPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMNGSYSLQTLITTQEHMWLLLPAWPMAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTTIIFLGPLYYINLPELYSTNFMMEALLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIFTAGV-P-PYM--MNP-ITLAIIYFTIFLGPVITMSSTNLMLMWVGLEFSLLAIIPMLINKKNPR-STEAATKYFVTQATASMIILLAIVLNYKQLGTW--MFQQQTNGLILNMTLMALSMKLGLAPFHFWLPEVTQGIPLHMGLILLTWQKIAPLSILIQIYPLLNSTIILML-AITSIFMGAWGGLNQTQMRKIMAYSSIAHMGWMLAILPYNPSLTLLNLMIYIILTAPMFMALMLNNSMTINSI---SLLWNKTPAMLTMISLMLLSLGGLPPLTGFLPKWIIITELMKNNCLIMATLMAMMALLNLFFYTRLIYSTSLTMFPTNNNSKMMT-HQTKTKPNLMF-------STLAIMSTMTLPLAPQLIT-----MN-LYTVIFINILLSLTLILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTIKTSTMMIMAFILVTILSLGLAYEWTQKG--LEWTE-MPSTFFNLTMAFSLSLLGTLMFRSHLMSTLLCLEGMVLSLFIMTSVTSLNSNSMSSMPIPITILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIILPSLMLLPLTWLSSPKKTWTNVTSYSFLISLTSL-TLLWQTDENYKNFS-NMFSSDPLSTPLIILTAWLLPLMLMASQNHLKKDNNVLQKLYISMLISLQILLIMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALILIQNHVGTLNLMILSFTTHTLD-ASW-----SNNLLWLACMMAFLIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGSYGMIRISIILDP-LTKYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSFMGATMLMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMVFPLMATWWLMASLANLALPPSINLMGELFITMSLFSWSNFTIILMGINIIITGMYSMYMIITTQRGKLTNHMINLQPSHTRELTLMALHMIPLILLTTSPKLITGLTM------MNIFTTS-ILLIFILLLSPILIS---MSNLIKH-INFPLYTTTS-IKFSFIISLLPLLMFFHNNMEYMITTWHWVTMNSMELKMSFKTDFFSILFTSVALFVTWSIMQFSSWYMHSDPNINRFIKYLTLFLITMLILTSANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMVWFSLNMNSWELQQIMFSNNN-DNLIPLMGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPLTTNNNFILTTMLCLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGMNQPHLAFLHICTHAFFKAMLFMCSGSIIHSLADEQDIRKMGNITKIMPFTSSCLVIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALLITLIATS-MTAMYSMRIIYFVTMTKPRFPPLISINENDPDLMNPIKRLAFGSIFAGFVISYNIPPTSIPVLTMPWFLKTTALIISVLGFLIALELNNLTMKLS--MNKANPYSSFSTLLGFFPSIIHRITPMKSLNLSLKTSLTLLDLIWLEKTIPKSTSTLHTNMTT--LTTNQKGLIKLYFMS---FLINI--ILIIILYSI---------NLE---- +>Mus_musculus_castaneus_ +----MNENLFASFITPT-MMGFPIVVAIIMFPSILFPSSK-RLINNRLHSFQHWLIKLIIKQMMLIHTPKGRTWTLMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVITGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISSM-ITLFILFQLKVSSQTFPL-APSPK-SLTTMKV-KTP-W-ELKWTKIYLP-HS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGFTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLIMIFMIWEAFASKREVMSVSYASTNLEWLHGCPPPYHTFEEPTYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYSSITLLTLGLLTNILTMYQWWRDVIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGISPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITIMLGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNMRKTHPLFKIINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGLYYGSYTFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILIMFLILMTLVLFFPDMLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWILVANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIEDKML---KLYP------MF--------FINILTLLVPILIAMAFLTLVERKILGYMQLRKGPNVVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPTLSLTLALSLWVPLPMPHPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSYSLQTLITTQEHMWLLLPAWPMAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTTIIFLGPLYYINLPELYSTNFMMETLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIFTAGV-P-PYM--MNP-ITLGIIYFTIFLGPVITMSSTNLMLMWVGLEFSLLAIIPMLINKKNPR-STEAATKYFVTQATASMIILLAIVLNYKQLGTW--MFQQQTNGLILNMTLMALSMKLGLAPFHFWLPEVTQGIPLHMGLILLTWQKIAPLSILIQIYPLLNSTIILML-AITSIFMGAWGGLNQTQMRKIMAYSSIAHMGWMLAILPYNPSLTLLNLMIYIILTVPMFMALMLNSSMTINSI---SLLWNKTPAMLTMISLMLLSLGGLPPLTGFLPKWIIITELMKNNCLIMATLMAMMALLNLFFYTRLIYSTSLTMFPTNNNSKMMT-HQTKTKPNPMF-------STLTIMSTMTLPLAPQLII-----MN-LYTVIFINILLSLALILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTIKTSTMMIMAFILVTILSLGLAYEWTQKG--LEWTE-MPSTFFNLTMAFSLSLLGTLMFRSHLMSTLLCLEGMMLSLFIMTSVTSLNSNSMSSMPIPITILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIILPSLMLLPLTWLSSPKKTWTNVTSYSFLISLTSL-TLLWQTDENYKNFS-NMFSSDPLSTPLIILTAWLLPLMLMASQNHLKKDNNVLQKLYISMLISLQILLIMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALILIQKHVGTLNLMILSFTTHTLD-TSW-----SNNLLWLACMMAFLIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGSYGMIRISIILDP-LTKYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSFMGATMLMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMVFPLMATWWLMASLANLALPPSINLMGELFITMSLFSWSNFTIILMGLNIIITGMYSMYMIITTQRGKLTNHMINLQPSHTRELTLMALHMIPLILLTASPKLITGLTM------MNIFTTS-ILLIFILLLSPILIS---MSNLIKY-INFPLYTTTS-IKLSFIISLLPLLMFFYNNMEYMITTWHWVTMNSMELKMSFKTDFFSILFTSVALFVTWSIMQFSSWYMHSDPNINRFIKYLTLFLITMLILTSANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMVWFSLNTNSWELQQIMFSNNN-DNLIPLMGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPLTTNNNFILTTMLCLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGMNQPHLAFLHICTHAFFKAMLFMCSGSIIHSLADEQDIRKMGNITKTMPFTSSCLVIGSLALTGMPFLTGFYSKDLIMEAINTCNTNAWALLITLIATS-MTAMYSMRIIYFVTMTKPRFPPLISINENDPDLMNPIKRLAFGSIFAGFIISYNIPPTNIPVLTMPWFLKTTALIISVLGFLIALELNNLTMKLS--MNKANPYSSFSTLLGFFPSIIHRITPMKSLNLSLKTSLTLLDLIWLEKTIPKSTSTLHTNMTT--LTTNQKGLIKLYFTS---FLINI--ILIIILYSI---------NLE---- +>Mus_musculus_house_mouse +----MNENLFASFITPT-MMGFPIVVAIIMFPSILFPSSK-RLINNRLHSFQHWLVKLIIKQMMLIHTPKGRTWTLMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVITGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISSM-ITLFILFQLKVSSQTFPL-APSPK-SLTTMKV-KTP-W-ELKWTKIYLP-HS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGFTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLIMIFMIWEAFASKREVMSVSYASTNLEWLHGCPPPYHTFEEPTYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSITLLTLGLLTNILTMYQWWRDVIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGISPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITIMLGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNMRKTHPLFKIINHSFIDLPAPSNISSWWNFGSLLGVCLMVQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGLYYGSYTFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILIMFLILMTLVLFFPDMLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWILVANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIEDKML---KLYP------MF--------FINILTLLVPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPTLSLTLALSLWVPLPMPHPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMNGSYSLQTLITTQEHMWLLLPAWPMAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTTIIFLGPLYYINLPELYSTNFMMEALLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIFTAGV-P-PYM--MNP-ITLAIIYFTIFLGPVITMSSTNLMLMWVGLEFSLLAIIPMLINKKNPR-STEAATKYFVTQATASMIILLAIVLNYKQLGTW--MFQQQTNGLILNMTLMALSMKLGLAPFHFWLPEVTQGIPLHMGLILLTWQKIAPLSILIQIYPLLNSTIILML-AITSIFMGAWGGLNQTQMRKIMAYSSIAHMGWMLAILPYNPSLTLLNLMIYIILTAPMFMALMLNNSMTINSI---SLLWNKTPAMLTMISLMLLSLGGLPPLTGFLPKWIIITELMKNNCLIMATLMAMMALLNLFFYTRLIYSTSLTMFPTNNNSKMMT-HQTKTKPNLMF-------STLAIMSTMTLPLAPQLIT-----MN-LYTVIFINILLSLTLILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTIKTSTMMIMAFILVTILSLGLAYEWTQKG--LEWTE-MPSTFFNLTMAFSLSLLGTLMFRSHLMSTLLCLEGMVLSLFIMTSVTSLNSNSMSSMPIPITILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIILPSLMLLPLTWLSSPKKTWTNVTSYSFLISLTSL-TLLWQTDENYKNFS-NMFSSDPLSTPLIILTAWLLPLMLMASQNHLKKDNNVLQKLYISMLISLQILLIMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALILIQNHVGTLNLMILSFTTHTLD-ASW-----SNNLLWLACMMAFLIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGSYGMIRISIILDP-LTKYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSFMGATMLMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMVFPLMATWWLMASLANLALPPSINLMGELFITMSLFSWSNFTIILMGINIIITGMYSMYMIITTQRGKLTNHMINLQPSHTRELTLMALHMIPLILLTTSPKLITGLTM------MNIFTTS-ILLIFILLLSPILIS---MSNLIKH-INFPLYTTTS-IKFSFIISLLPLLMFFHNNMEYMITTWHWVTMNSMELKMSFKTDFFSILFTSVALFVTWSIMQFSSWYMHSDPNINRFIKYLTLFLITMLILTSANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMVWFSLNMNSWELQQIMFSNNN-DNLIPLMGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPLTTNNNFILTTMLCLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGMNQPHLAFLHICTHAFFKAMLFMCSGSIIHSLADEQDIRKMGNITKIMPFTSSCLVIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALLITLIATS-MTAMYSMRIIYFVTMTKPRFPPLISINENDPDLMNPIKRLAFGSIFAGFVISYNIPPTSIPVLTMPWFLKTTALIISVLGFLIALELNNLTMKLS--MNKANPYSSFSTLLGFFPSIIHRITPMKSLNLSLKTSLTLLDLIWLEKTIPKSTSTLHTNMTT--LTTNQKGLIKLYFMS---FLINI--ILIIILYSI---------NLE---- +>Mus_cervicolor_fawn-colored_mouse +----MNENLFASFITPT-MMGLPIVVTIIMFPSILFPSSK-RLINNRLYSFQHWLIKLIIKQMMLIHTPKGRTWTLMIVSLMMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVIMGFRHKLKSSLAHFLPQGTPFTLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIVSSM-ITLFILFQLKISSQTFPL-PPSPK-SLTAMKV-KNP-W-ELKWTKIYLP-HS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLVMIFMIWEAFASKREVSSVSYASTNLEWLHGCPPPYHTFEEPTYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSITLLTLGLLTNILTMYQWWRDVIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGIFPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITIMLGLYFTVLQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIICLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLFKIINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGMYYGSYTFMETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAAMVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGVLIMLSFLMTLVLFFPDMLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLAFLPFLHTSKQRSLMFRPITQILYWILVANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIEDKML---KLYP------MY--------FINILTLLVPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSISLFIIAPTLSLTLALSLWVPLPMPHPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSYSLQTLITTQENMWLIIPAWPMAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTTIIFLGPLHYIYIPELYSITFMTEALLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIFLAGT-P-PYM--MNP-ITLITIYSTIFLGPMITMSSTNLLLMWVGLEFSLLAIVPLLINKKNPR-STEAATKYFVTQATASMIILLAIILNYKQLGTW--MFQQQTNNIILNMTLMALSMKLGLAPFHFWLPEVTQGIPLHMGLILLTWQKIAPLSILIQIYHLLDTTIILLL-AISSIFLGAWGGLNQTQMRKIMAYSSIAHMGWMLAILPYNPSLTLLNLAIYILLTTPMFMALMLNNSMTINSI---SLLWNKTPAVLTMTSLILLSLGGLPPLTGFLPKWITITELMKNNCLIMATLMAMMALLNLFFYTRLIYSTSLTMFPTNNNSKMMN-YYPKMKSYLMF-------STLAILSTMTLPLSPQLIM-----MN-LFIVILINTLLSLALISIAFWLPQMNVYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTINTTVMMTMAFILVTILSLGLMYEWMQKG--LEWTE-MTSAFFNLILAFTLSLLGTLMFRSHLMSTLLCLEGMMLSLFIMTSMTTLNSNSMSSMPIPITILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLTWLSNYKKTWVNVTSYSFLISLISL-SLLWQTDENYKNFS-NIFSSDPLSTPLIILTTWLLPLMLMASQNHLKKESLPLQKLYISLLTSLQILLIMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALILIQNHIGTLNFTILSLTTHTMD-TSW-----SNNLMWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGSYGMMRISIILDP-LTKYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSYMGATMLMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMATCWLMASLANLALPPSINLMGELYITISLFSWSNFSIILMGTNIIITGMYSMYMIITTQRGKFTSHMINLQPSHTRESTLMILHLIPLILLTINPKLITGLTM------MNIFTTS-ILLIFTILLSPILIS---MSNLIKH-VNFPLYTTTS-IKFSFFVSLAPLLLFLYNNMEYMITTWQWITMNSMKLTMSFKIDFFSILFMSVALFVTWSIMQFSSWYMHSDPHINRFIKYLTLFLITMLILTSANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMTWFSLNMNSWELQQIMFSNNN-DNLIPLMGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTSNNNNILTIMLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGMNQPYLAFLHICTHAFFKAMLFMCSGSIIHSLADEQDIRKMGNMMKTMPFTSSCLVIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALLITLIATS-MTAMYSMRIIYFVTMTKPRFPPLISINENDPDLINPIKRLAFGSIFAGFLISYNIPPTNIQILTMPWFLKTTALIISVLGFLIALELNNLTMKFS--TNKTNPFLSFSTLLGYFPSIIHRITPNTSLNMSLKTSLTLLDLIWLEKLIPKSTSTIHTNMTA--LTTSQKGLIKLYFMS---FLISI--ILIVILYII---------NPEWSQ- +>Mus_spretus_western_wild_mouse +----MNENLFASFITPT-MMGFPIVVAIIMFPSILFPSSK-RLINNRLHSFQHWLIKLIIKQMMLIHTPKGRTWTLMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVITGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISSM-ITLFILFQLKVSSQTFPL-APSPK-LLTTMKV-KTP-W-ESKWTKIYLP-HS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLIMIFMIWEAFASKREVMSVSYASTNLEWLHGCPPPYHTFEEPTYVKV-K--------MAYPFQLGLQDATSPIMEELTNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYSSITLLTLGLLTNILTMYQWWRDVIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGISPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITIILGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNMRKTHPLFKIINHSFIDLPTPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGMYYGSYTFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILIMFLLLMTLVLFFPDMLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWILVANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIEDKML---KLYP------MF--------FINILTLLLPILIAMAYLTLVERKILGYMQLRKGPNVVGPYGILQPFADAMKLFIKEPMRPLTTSMSLFIIAPTLSLTLALSLWVPLPMPYPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSYSLQTLITTQEHMWLVLPAWPMAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTTIIFLGPLYYINLPELYSTNFMTEALLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIFTAGT-P-PYM--MNP-MTLAIIYLTIFLGPVITMSSTNLMLMWVGLEFSLLAIIPMLINKKNPR-STEAATKYFVTQATASMIILLAIVLNYKQLGTW--VFQQQTNGLILNMTLMALSMKLGLAPFHFWLPEVTQGIPLHMGLILLTWQKIAPLSILIQIYPLLNPTIILML-AITSIFMGAWGGLNQTQMRKIMAYSSIAHMGWMLAILPYNPSLTLLNLMIYIILTIPMFMALMLNNSMTINSI---SLLWNKTPAMLTMISLMLLSLGGLPPLTGFLPKWIIITELMKNNCLIMATLMAMMALLNLFFYTRLIYSTSLTMFPTNNNSKMMT-HQTKTKPNLMF-------STLAVMSTMTLPLAPQLIT-----MN-LYIIIFINILLSLTLILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTIKTSTMMTMAFILVTILSLGLAYEWTQKG--LEWTE-MPSAFFNLTMAFSLSLLGTLMFRSHLMSTLLCLEGMMLSLFIMTSVACLNSNSMSSMPIPITILVFAACEAAVGLALLVKISNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLTWLSNPKKTWTNVTSYSFLISLVSL-SLLWQTDENYKNFS-NMFSSDPLSTPLIILTAWLLPLMLMASQNHLKKDNNVLQKLYISMLVSLQALLIMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALILIQNHIGTLNLMILSFTTHALN-TSW-----SNNLLWLACMMAFLIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGSYGMIRISIILDP-LTKYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSFMGATMLMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMVFPLMATWWLMASLANLALPPSINLMGELYITMSLFSWSNFTIILMGINIIITGMYSMYMIITTQRGKLTNHMINLQPSHTRELTLMALHMIPLILLTISPKLITGLTI------MNIFTSS-ILLIFILLLSPILIS---MSNLIKH-INFPLYTTTS-IKFSFLISLLPLLMFFHNNMEYMITTWHWITVNSMELKMSFKIDFFSILFMSVALFVTWSIMQFSSWYMHSDPNINRFIKYLTLFLITMLILTSANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMVWFSLNMNSWELQQIMFSNNN-DNLLPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPLTTNNNYILTTMLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGMNQPYLAFLHICTHAFFKAMLFMCSGSIIHSLADEQDIRKMGNITKTMPFTSSCLVIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALLITLIATS-MTAMYSMRIIYFVTMTKPRFPPLISINENDPDLMNPIKRLAFGSIFAGFVISYNIPPTNIPILTMPWLLKTTALIISVLGFLIALELNNLTMKLS--MSKANPYSSFSTLLGFFPSIIHRITPMKSLNLSLKTSLTLLDLIWLEKTIPKSTSTLHTNMTT--LTTNQKGLIKLYFLT---FLINI--TLIIILYSI---------NPE---- +>Oreamnos_americanus_mountain_goat +----MNENLFASFITPM-MLGLPLATLIVLFPSLLFPSSN-RLINNRFISLQQWVLQLTSKQMMSTHSTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVVMGFRNKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALTS-ISNMAALIMFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LALFIVFQLKISKHNFYH-NPELM-TTKTLKQ-DTP-W-KTKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMTFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSNMDAQEVETIWTVLPAIILIMIALPSLRILYMMDEINNPFLTVKAMGHQWYWSYEYTDYEDLSFDSYMIPTPELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMTLLFLGLTTNMLTMYQWWRDVIRESTFQGHHTPVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLTSGVSITWAHHSLMEGDRKHMLQALFITIALGLYFTLLQVSEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGILSDADKIPFHPYYTIKDILGAMLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALALSILVLMLVPFLHMSKQRSMMFRPISQCVFWTLVADLLALTWIGGQPVEHPYMVIGQLASIMYFLIILVMMPVASTIENNLL---KW--------MF--------MVNILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSTSMFILAPILALTLALTMWTPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINLIVKSLLLTITFLWIRASYPRFRYDQLMYLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-VVFTIILMTIMLGTIIVMISSHWLLIWIGFEMNMLAMIPIMTKKHNPR-ATEASIKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPMASMLVTMALAMKLGMAPFHFWVPEVTQGIPLSSGMVLLTWQKLAPMSVLYQILPSINLNLILTL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILPYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPILTVLVLITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMSITALLNLYFYMRLAYSTALTMFPSTNNMKMKW-QFSTTKRMTLL-------PTMTVLSTMLLPLTPMLSILE---MN-LMITLLTNFMLATLLMTIAFWLPQLNAYSEKTSPYECGFDPMMSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLIMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMTAFTVSLMGLLMYRSHLMSSLLCLEGMMLSLFVMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIVPTMMLMPLTWLSKNNMIWINSTLHSFLISFTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESPARKKLFISMLVLLQLFLIMTFTATELIFFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLIALTYIQNTMGSLNFLILQYWVQPMS-NSW-----SNTFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTLLLYP-ITDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVIVAILVQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQMFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKHTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSL-TLTTLILLTAPIMMT---SINTHKS-TNYPFYVKTT-VLYAFITSMIPTMMFIYTGQEMIISNWHWLTIQTLKLTLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILTMAWFLINLNTWDLQQIFMLKPD-NSNLPLMGLILAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFVQSTMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLLKTMPFTTTALIIGSLALTGIPFLTGFYSKDLIIEATNTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPLLVNPIKRLLLGSLFAGFIISNNIPPMTIPQMTMPYYLKMTALAVTILGFILALEISNMTYYLK--FNYPSNMFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLETILPKTISLIQMKMST--SITSQKGLLKLYFLS---FLITI--LISMILF----------NFHE---- +>Pteropus_vampyrus_large_flying_fox +----MNENLFSSFITPT-MMGLPIVTLIIMFPSMLFPSTN-RLINNRLVAIQQWIIHLTSKQMMAIHNQTGQKWSLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVALGFRHKTKASLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTMTALITFVILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-LTLYIIMQLKISKHLYHQ-NPEPT-IAESTKH-STP-W-EDKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNETWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMVFMIWEAFASKREVSTVELTTTNLEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLHFHDHALMIVFLISSLVLYLISVMLTTTLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPYLTVKTMGHQWYWSYEYTDYEDLTFDSYMVPTQDLKPGELRLLEVDNRVVLPMELTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLAMWFHFNTPSILLLGLLTNLLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFIGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKPMLHALLTTILLGGYFTLLQASEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLFVCFVRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLFKIINDSLIDLPAPSNISSWWNFGSLLGICLAIQILTGLFLAMHYTSDTTTAFQSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGLYYGSYMYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALVLVHLLFLHETGSNNPTGVPSDSDMIPFHPYYTIKDMLGALVMILALLMLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPLSQCMFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLLILVLMPITSIVENHLL---KW--------MF--------MVNLLTMIVPILLAVAFLTLIERKVLGYMQLRKGPNVVGPYGLLQPMADALKLFIKEPLRPLTSSPSMFIIAPILALTLALTMWIPLPMPHPLINMNLAVLFMLAMSSLAVYSILWSGWASNSKYALIGAMRAVAQTISYEVTLAIILLSVLLLSGSFSLSTLIITQEHTWLMLSSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFMAEYANIIMMNTLTAILFTGAFHNPLMPELYTINLIIKTLLLTVFFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVAMPITMAGI-P-PQT--MNP-LVFTMIMSTVMLGTAIVATSSHWLMAWIGFEMNMLAVIPILMKKYNPR-SMEASTKYFLTQATASMLLMLAVTVNLVYSGQW--AITKPLSPTASTIMTLAMAMKLGLSPFHFWVPEVTQGISLPSGLILLTWQKLAPMSILYQISPTINLDLLMVL-SILSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILTYNPTMTLLNLTIYILLTTTTFMMFMLTSTTTTLSL---SHTWNKMPLLTTAILLTMLSLGGLPPLSGFMPKWMIIQELTKNDSVIMPTTMAVMALLNLYFYMRLTYSTSLTMFPSTNNMKMKW-QFNYTKSTTHL-------SPLIILSTLILPLSPMLALLE---MN-LMVTLLTNTLLASLLVLIAFWMPQMNTYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLTIMLTMSLTLISLLAISLAYEWFNKG--LEWAE-MALTYMNMALAFTVSLLGLLMYRSHLMSSLLCLEGMMLSLFVTMSLTILNSNLVLASMIPIILLVFAACEAALGLSLLVMVSNTYGVDYVQNLNLLQCMLKIIMPTIMLIPLTWLSKNNMIWINTTAHSLIITLLSL-PLLNQFNDNSLNLS-LMYFSDSLSTPLLMLTMWLLPLMIIASQFHLTKETYTRKKLYITMLISLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGAQTERLNAGLYFLFYTLVGSLPLLVALIYMQNITGSLNILLTQYWSEPLT-NSW-----GNSFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTVLNP-TTSFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTVLPLMAAWWLLASLTNLALPPSINLIGELFVVMSTFSWSSMSIILMGINIVITALYSLYMLIMTQRGKQTYHINNIPPSYTRENTLMAMHLLPLLLLSINPKIILGTLY------MNLFTSS-MLLSMLILTAPIVLS---NSNFYSN-KLYPNYVKTM-VSYSFMMSLIPMMIFIQSGQETMVSNWHWMTIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFLVAMAWFLLNLNTWELQQIFALNPT-NTNLPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKTIQTAMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTVGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKTMPFTTTALITGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALMLTLIATS-LTAVYSTRIIYFALLGQPRYPTLILINENNPLLINPIKRLLVGSIFAGFIISNNITPTTIPQMTMPMYLKMTALFVTLLGFTVALELNMATQNLK--LNSQSNSLKFSNLLGYFPTIMHRLQPLVNLLMSQKVASMLLDMIWLESVLPKSISFFQAKTST--LISSQKGQIKLYFLS---FLITL--TLSLIMT----------NYI----- +>Naemorhedus_goral_ +----MNENLFTSFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWVLQLVSKQMMSIHNIKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHLLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMVILSMF-LTLFIIFQLKISKHNFYY-NPELT-AMKTPKQ-NNP-W-ETTWTKIYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIIALMLTTKLTHVSTMDAQEVETIWTIMPAIILITIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLEYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMILLALGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWG---MTNTRKTHPLMKIVNNAFIDLPTPPNISLWWNFGSLLGICLILQILTGLFLAMHYSSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFSETWNIGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPTGIPSDMDKIPFHPYYTIKDILGAMLLILTLMLLVLFTPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVIVPLLHTSKQRSMMFRPISQCLFWTLVADLLALTWIGGQPVEYPYIIIGQLASIMYFFIILVLMPVAGTIENNLL---KW--------ML--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSVSMFILAPILALGLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINLTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IISIIILMTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPTASMFMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQTLPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIVYIMMTSTMFMLFMANSTTTTLSL---SRTWNKAPVMTVLILITLLSMGGLPPLSGFMPKWMIIQEMTKNNNIILPTFMAITALLNLYFYMRLTYSTALTMFPSTNNLKMKW-QFSTTKRMTLL-------PTMTVLSTMLLPLSPILSILE---MN-LMITLLTNFTLATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLCTMLTTALLLILLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFAMSLMGMLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWLSKNNMIWINPTLHSLLISLTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFISMLILLQLLLIMTFTATELIFFYITFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVHIQNVIGSLNFLVLQYWVQPMS-NSW-----SNTFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRISLLLNP-MTDFMSYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVMMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMALHMLPLLLLSLNPKVILGPLY------MNLFSSF-TLTTLILLTAPIMAT---NLNIYKS-SNYPLYVKTT-ISYAFITSMVPTMMFIHTGQETVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLKPD-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKSIQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFTLLGQPRFPTLITINENNPLLINSIKRLLIGSLFAGFIISNNIPPMTTPQMTMPYYLKMTALAVTALGFVLALETNNMTYNLK--FNYPSNIFKFSNLLGYYPTIMHRLAPYTSLTMSQKSASSLLDLIWLETILPKTISTAQVKMAT--MITNQKGLIKLYFLS---FLITI--FISMILF----------NFHE---- +>Propithecus_edwardsi_Milne-Edwards_sifaka +----MNENLFASFITPT-IVGIPIVILIIAVPSILFPSPT-RLISNRLTSLQQWLIQLVLKQLMMMHSIKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTS-ISPTTASITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITILSMV-LTLFIIFQLKVSKFNYPL-NPESK-TINVNKY-VSP-W-ETKWTKIYLP-LS-LPQQL---MFINRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTLWNTVSSIGSFISLTAVMLMIFMIWEAFASKREVLMVELTPTNLEWLHGCPPPYHTFEEPAYVKM-P--------MAYPVQLGFQDAASPIMEELLYFHDHTLMIVFLISSLVLYIISLMLTTKLMHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEITSPSLTLKTMGHQWYWSYEYTDYEDLSFDSYMTPSSDLKPGELRLLEVDNRVVLPTEMSIRMLISSEDVLHSWTVPSLGVKTDAIPGRLNQATLMTSRPGIYYGQCSEICGANHSFMPIVLELIPLKHFEEWLLSMF----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHHNSNTLLTLGLLTNLLTMYQWWRDVVREGTFQGHHTQAVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTAVLLASGVSITWAHHDLMEGNRTHMLQALLITISLGIYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKNHPLIKIMNNSFIDLPAPSNISSWWNFGSLLGACLVLQIITGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFLCLFIHVGRGLYYGSFVLSETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMVHLLFLHETGSNNPLGIPSNPDKIPFHPYYTIKDLLGLLLLILPLMTLVFFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIIPFLQTAKQQSMTFRPLSQCLFWILVADLYTLTWIGGQPVEHPFITIGQTASILYFTLILIAMPTMGLIENKML---KW--------MF--------TLNLLLLIIPILLAMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPLINMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEYTWLMIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPYTPQAYSTMFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGI-P-PQM--MNP-IALMPIITTIFTGTMLTMISSHWLLIWMGLEMNMLAIIPILAKKTNPR-STEAATKYFLTQATASMLLMMTIVINAMYTGQW--NVTNIHNLLTTLTIIIALTMKLGMTPFHFWIPEVTQGVTLTAGMLLLTWQKLAPISIMLQIYPSMNTNILLTF-ALLSALVGGWGGLNQTQLRKILAYSSIAHMGWMVAVLTFCPSLTILNLLIYLMLTITLFTMLNVNTSTTTLTL---SILWNKNPTITLMILTSLLSLGGLPPLTGFLPKWVIVQELTKNNNITMATIMVITALLNLYFYMRLIYSTSLTMFPTSNNMKMKW-QLQPTKFTLFL-------SPLITLSTLSLPLSPILLTLS---MN-LSLTLMIDITLALLLVVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNLMLTMALLLISVLAAGLAYEWSQKG--LEWEE-MPSIFTNIILAFATALLGTLVFRSHLMSSLLCLEGMMLSMFVLSTLIILNMHFTMSFMMPILLLVFAACEAAVGLALLVMVSNTYGLDYIQNLNLLQCMLKIIVPTIMLFPVTWYSSNSKIWINTTLYSLMISFVSL-SFLNQSNNNSNNFS-LNFFSDPLSSPLLMLTMWLLPLMIMASQYHLKKEPWLRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTMNFWLKELP-NSW-----SSNLLWTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDP-TTKSMAYPFLMLCLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMMATFSWSNISIILMGLNMLITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTILGPTFC-----MNLFPSL-TLTTLTILALPIAMN---LT-NHKN-TSFAPHVKSS-IACAFITSLIPTMLFMFSGQEMIISNWHWMTIQTLKLSLSFKLDHFSILFVPVALFVTWSIMEFSMWYMNTDPNINQFFKYLLTFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLYSNTWEFQQMFMLNQD-PNIIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPMMENNKTIQTMALCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKAMPFTSSSLIIGSLALTGMPFLTGFYSKDLIIESTNTSNTNAWALMITLIATS-LTAIYSTRIIFYVLTNQPRFTTTITINENNPLLINSIKRLAFGSIFAGFFLSYNIPPMNLPQMTMPTYLKMTALMVTITGFILAMELNLMTKNLK--LKPSSNMFKFSEQLGYFPTTMHRLMPSLNLTMSQKTASLLLDLVWLEKTMPKNLSHLQMTTSI--VVSNQKGLIKLYFIT---FLTSI--LLTTLLII----------------- +>Taxidea_taxus_American_badger +----MNENLFSSFITPT-MMGLPIVVIITMFPSILFPSPN-RLVPNRLISIQQWLVQLTSKQMLSIHSSKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVIIGFRHKTKASLAHFLPQGTPLPLIPMLVVIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLTN-MSTIAAMVTFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITIISMI-ITLFILFQLKLSKYNFPE-NPESK-LTSKLKP-TVP-W-EKKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFTGYTLNDVWAKAHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVLMVELTSTNIEWLHGCPPPYHTFEEPTYVLS-K--------MAYPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSMILLALGMTTNMLTMYQWWRDIIREGTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGILPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQGLFITISLGLYFTLLQASEYYETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLVVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSFIDLPAPSNISTWWNFGSLLGVCLIIQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYMFPETWNIGIILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAAIHLLFLHETGSNNPSGIPSNSDKIPFHPYYTIKDILGALLMALLLMVLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILAIIPLLHTSKQRSMMFRPLSQCMFWLLVADLLILTWIGGQPVEHPYITIGQLASILYFTILLALMPTISIIENNLL---KW--------MF--------MINIISLIVPILLAVAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFMMAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHTPYLPELYSVNFIMKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMTASI-P-PQT--MKP-PILITIMSTVISGTIMVLMSSHWLTIWIGFEMNMLAVIPILMKNFNPR-ATEASTKYFLTQATASMLLMLGIITNLLLTGQW--TALSTPNPIASNMMTVALAMKLGLSPFHFWVPEVTQGISLSSGMILLTWQKIAPLSILYQISPSTNPNLLTIM-AIMSILTGGWGGLNQTQLRKIMAYSSIAHMGWMVAVTTYNPTLMTLNLMIYIMMTLGTFMLFMLNSSTTTLSL---SNMWNKSPLIASLVLTIMLSLGGLPPLSGFIPKWMIIHELTKNDMIIMPVFMAMTALLNLFFYMRLTYTTALTMFPSTNITKMKW-QFENTKTMTLL-------PPLIVISTMMLPLTPMMLTIS---MN-MVLTLFTNMALASLLVLIAFWLPQLNIYSEKAGPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSINLNTMLTMALLLISLLAISLAYEWTEEG--LEWNE-MSMVYINIFLAFTLSFMGLLIYRSHLMSSLLCLEGMMLSLFVLMTVTILSNHFTLASMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTLTLIPLTWLSKPNMIWINTTAYSMLISLISL-MYLNQLTDNSLNFS-LLFFTDSLSAPLLMLTTWLLPLMLMASQHHLSKETLIRKKLYITMLITLQLFLMMTFAATELVMFYIMFEATLMPTLIIITRWGNQAERLNAGLYFLFYTLTGSLPLLIALLWAQNNSGTLNLLVLQHWTQPLS-DSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMMLNP-LTSFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAVLIQSPWSYMGATALMIAHGLTSSVLFCLANSNYERTHSRTMILARGLQMLLPLMASWWLLASLTNLALPPTINLMGELFVVVASFSWSNITIILMGLNITITALYSLYMLITTQRGKHTHHIKNIKPTYTRENCLMALHLLPLLLLSLNPKIILGAIY---MKVINPFSPL-ILVTLFMLTLPVMMT---STTIYTS-KLYPQYVKTT-ISYAFMTSLIPTMMFLHSGQDMMISNWHWITIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMTMAWFLTNLNTWDLQQIFMTNNE-NLNIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTMQTATLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKALPFTTTSLTVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLVATS-LTAAYSTRIMFFALLGQPRFNPTAMINENNPFLINSIKRLLFGSIFAGYFITYNITPTTVPQMTMPHYLKTTALIVTILGFILALELILTMQSLK--FKYPNNLTKFSSMLGYYPIIIHRLMPKMNLLMSQKSASTLMDLIWLEKILPKSISHFQMKSSI--TVSNQKGLIKLYFMS---FMFTL--TFTLLML----------NFHE---- +>Saiga_tatarica_ +----MNENLFASFITPM-MLGLPIVTLIVLFPSLLFPTSN-RLVNNRLISLQQWMLQLVSKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYY-NPEPT-LTKTLKQ-TTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTILLMLGLTTNMLTMYQWWRDVIRESTFQGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNQMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTATAFHSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDSDKIPFHPYYTIKDILGALLLILILMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCLFWVLVADLLTLTWIGGQPVEYPYITIGQLASIMYFLLILVLMPVASTIENNLL---KWK-------MF--------MVNILTLIIPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPLMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILMTVLLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLIFSGQW--TVTKLFNPMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKMPIMTILVLVTLMSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSSMKQMTLL-------PTMITLSTMLLPLTPILSILE---MN-LMLALMTNLTLATLLVTIAFWLPQLNTYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLAISLAYEWTQKG--LEWTE-MSLVHMNIMVAFMVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKFNMIWINSTMHSLMISFTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQHHLLKENLTRKKLFITMLVLLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGSQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLILQFWTQPMS-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTLLLNP-MTDLMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLIMTQRGKYTHHINNISPSFTRENSLMSLHMLPLLLLSLNPKIILGPLY------MNMFSSF-TLVTLLLLTVPIMMT---NFNIYKT-SNYPMYVKTT-ISCAFLTSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLANLNTWDFQQIFLLNPD-NSNLPLLGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPALIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPTTVPQMTMPYYLKMMAMAVTILGFILALEISNTTYNLK--FNYPSNVFKFSNLLGYYPTIMHRLTPYANLTMSQKSASSLLDLIWLENILPKTTSLIQMKMST--MVTNQKGLIKLYFLS---FLITI--LVSMLLF----------NFHE---- +>Distoechurus_pennatus_ +----MNENLFAPFITPT-IMGISTLPIIMMFPCLILTSPK-RWLPNRIQTLQIWLIRMITKQMMMMHNKQGRSWTLMLMSLILFIASTNLLGLLPYSFTPTTQLSMNIGMAIPLWMGTVTMGFRNKPKMSLAHFLPQGTPTPLIPMLIVIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALSS-ISMTISSITFTILFLLTILELAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFFTITLML-ISLFCMYQLKMLNQTMTSISPQNNKNPK-TNI-NMP-W-EKKWTKIYLP-HS-SPLQS---MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPALSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYMLNDMWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSIGSFISLTAVILMLFIIWEAFASKREVSSVELTSTNIEWLYGCPPPYHTFEQPVFVKS----------MPYPMQLGFQDATSPIMEELVYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETIWTILPAVILVMIALPSLRILYMMDEIYNPYLTVKAMGHQWYWSYEYTDYEDLTFDSYMIPTPDLNPGQLRLLEVDNRVVLPMELPIRMLISSEDVLHAWAVPSLGLKTDAIPGRLNQATLTSTRPGVYYGQCSEICGSNHSFMPIVLEMTTLKYFEKWSSMMQ----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSIMLLSIGLMTMLLTMFQWWRDIVREGTFQGHHTPVVQKGLRYGMILFILSEVFFFLGFFWAFYHSSLAPTHELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMESNRKQMIQALMITILLGLYFTILQALEYYESSFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCLLRQFNFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKTHPLMKIINHSFIDLPAPSNISAWWNFGSLLGICLTIQIMTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRNLHANGASMFFMCLFLHVGRGLYYGSYMYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHETGSNNPSGINSNSDKIPFHPYYTIKDMLGLVLMLLSLLTLSLFSPDLLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLIIPLLHTSKQRSLMFRPISQTLFWLLTANLLTLTWIGGQPVEQPFIIIGQLASIIYFLLIMVFMPLAGLLENYMLK-PKW--------MY--------VINLFLYIIPILLAVAFLTLVERKVLGYMQFRKGPNIVGPYGLLQPFADAVKLFTKEPLRPLTSSVSMFIIAPILALTLALTIWTPLPMPHALIDLNLGLLFILSLSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKNLIITQENMWLIVSTWPLAMMWYISTLAETNRAPFDLADGESELVSGFNVEYAAGPFAMFFLAEYANIMAMNAMTAILFFGSTANNNFTYFNTLAFMTKTLILTFLFLWIRASYPRFRYDQLMYLLWKNFLPMTLALCLWFISMPIALSCI-P-PQI--MSP-HTLMIVMASLLLGTSLTLFSNHWLLAWMGLEINTLAIIPMLTYPKHSR-ATESAIKYFLTQATASMVVMFAIILNAWMTNQW--SLIQMFYQPASILMTLALAIKLGLAPFHFWVPEVTQGIPLLSGMTLLTWQKIAPTSLLYQMSPTLDMKILITL-AILSTILGGWGGLSQTQLRKILAYSSIAHMGWSVIIILINPTFTLLNLLIYILTTLTLFLLLNLTSMTKMKAI---TNLWNKSTPLIIIIFLILLSLGGLPPLTGFTPKWLIIQELTSNNNITTAILMALSALLNLFFYMRIIYSSTLTIFPTSNNSKFHW-FHPQSKTTNII-------PFLTIISSFLLPLSPMYIILSP-MIN-LILTLMINTLLATIIVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWATQLTSLNSTLTLAFCLILLLTIGLAYEWTQKG--LEWTE-MMPINLNLIMAFSLALIGALVYRSHLMSTLLCLEGMMLSLFIQMALLISHFHMFSMSMAPLILLVFSACEAGLGLALLVKTSSNYGNDYVQNLNLLQCMLKILVPTLMLIPLTWLSKKPWLWINSTTHSFFISLMSL-SLLHHNPDINSNFN-NSFFSDSLSSPLLALSCWLLPLMMIASQNHLSKESLNRKKSYLTMLITLQLSLIMAFTASELIMFYIMFESTLIPTLIIITRWGNQNERLNAGMYFLFYTLIGSLPLLVALLYLHSNLGSLH-FSITMITNHSS-LSI-----SNSILWYACMLAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRLTVFMDP-LTSFLYYPFIILSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMGLVIIAALMQSTLSFMGATTLMIAHGLTSSMLFCLANTNYERIHSRIMILARGLQTILPMMSTWWLLASLANLALPPSINLLGELAVIISSFSWSQFSIILLGINTVITALYSLHMLITSQRGKFTYHLYPIKPSFTREHTLMILHLIPLIMFSINPKFILGMTL------MNFLHNSTNILTITLLTLPLLYN---FMYPNKT-SNYPLFCKNI-IKLAFLTSLPTLFTFLNLGQESTITNWQWFSINSFNISMSFKLDYFSIIFIPIALYVTWSILEFSMWYMHSDPSIHQFFKYLTTFLLTMIILVSANNLFQLFIGWEGVGIMSFMLISWWYGRSDANTAALQAVLYNRIGDIGFMMTMAWLMTNNNSWDLQNIFTMHTD---TLALMGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPIMENNQTILTTTLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFPCSGSIIHSLNDEQDVRKMGGLLTIMPITSSALTTGSLALMGMPFLAGFYSKDSILEAMNTSHTNSWALMITLMATS-LTAMYSFRIIFFVLLNQPRYLPLSPINENNPNLINPILRLALGSIFAGFLLTLNLPPSSTITMTMPQTMKLLALIVTTTGFLVAMELNSLTNKLP--TIKLIHTHNFSNMLGYFTYLHHRIYPLVNLQMGQHIATMLIDLNWYEKSGPKGQMNLHSSMSA-SITSSQKGLIKTYFLS---FIISM--SVILMII------------------ +>Ovis_aries_sheep +----MNENLFASFITPM-MFGLPLVTLIVLFPSLLFPTSN-RLVNNRLISLQQWMLQLVSKQMMSIHNTKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWGGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-INTTTALITFIILILLTVLEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYH-NPELM-TTKTPKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLPSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRYHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYMSIYWWGS--MINIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGAILLILILMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVMMPVASIIENNLL---KW--------MF--------MINVLTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLSITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IILIIILMTVMLGTIIVMISTHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLDLILTL-SILSITIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKAPIMTILVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPTTKRMTLL-------PTMTVLSTMLLPLTPILSILE---MN-LMITLLTNFTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFILATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNSMIWINTTLHSLLISLTSL-LLLNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLARKKLFISMLILLQLFLIMTFTATELIFFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTMGSLNFLILQYWVQPMP-NSW-----SNTFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITLLLNP-ITDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKHTHHINNILPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSL-TLVTLILLTMPIAAI---NFNTHKF-TNYPLYVKTT-ISCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDFFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLINLNTWDLQQIFMLNPN-DSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFGQSIMLCLGAMTTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLVATS-FTAIYSTRIIFFALLGQPRFPTLININENNPFLINSIKRLLIGSLFAGFIISNNIPPMTIPQMTMPHYLKMTALTVTILGFILALEISNTTHYLK--FNYPSNTFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLETILPKTISLAQMKMST--TITSQKGLIKLYFLS---FLITI--LISTTLL----------NFHE---- +>Melogale_moschata_Chinese_ferret-badger +----MNENLFSSFITPT-MMGIPIVIAIVMFPSIMFPSPN-RLINNRLVSIQQWLVQLTSKQMLSIHNQKGQTWALMLMSLIMFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVVMGFRYKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTITAVVTFVILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-ITLFFVFQLKMSKYSFPE-NPEPK-LVATSKS-ITP-W-EEKWTKIYFP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDVWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFIIWEAFASKREVLTVELTPTNIEWLHGCPPPYHTFEEPTYVLS-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISSMLTTKLTHTSTMDAQAVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLITSGLVMWFHFNSMFLLTLGMTTNTLTMYQWWRDVIREGTFQGHHTPPVQKGLRYGMVLFITSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIALGLYFTLLQASEYYEAPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLSYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLTKIINNSFIDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYSSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYMFPETWNIGIILLLAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIVSALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALLLILTLMVLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILAVVPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFTILLVFMPVISIIENNLL---KW--------MF--------LINIISLIVPVLLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFVMAPILALALALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILMSVLLMNGSFTLSTLIITQEHVWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHMPYFPELYSINFATKTLLLTASFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASI-P-PQT--MKP-PILITIMSTVILGTIMVLMSSHWMMVWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMLGVIINLLLTGQW--TMLNTPNTIATNMMTVALAMKLGLSPFHFWVPEVTQGVPLSSGMILLTWQKIAPLSVLYQISPSMNSNLLMTM-AAMSVLTGGWGGLNQTQLRKILAYSSIAHMGWMIAVTTYNPTLMTLNLMIYIMMTLGTFMLFALNSSTTTLSL---SHTWNKLPLVTSLILAIMLSLGGLPPLSGFIPKWMIIHELTKNDMVTMAMFMAITALLNLYFYMRLTYATALTMFPSANSMKMKW-QFENTKNMTLL-------PPLIVTSTMLLPLTPMVSTLL---MN-MALTLLINALLASLLVLIAFWLPQLNIYTEKAGPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSINLKTTLTMALALISLLAVSLAYEWTEEG--LEWNE-MSMVYINIFLAFTLSFMGLLIYRSHLMSSLLCLEGMMLSLFVMMTVTILVNHFTLASMAPIILLVFAACEAALGLSLLVMISNTYGTDYVQNLNLLQCMLKIIIPTMMLIPLTWLSKPNMIWINTTAHSMLISLIGL-TYLNQPTDNSLNFS-LLFFADPLSAPLLALTMWLLPLMLMASQHHLSKETLPRKKLYITMLAMLQLLLIVTFTATELIMFYILFEATLLPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLWLQNKLGTLNLLVIQYWAQPLP-DSW-----SNILLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMLLNP-LTNFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQMLLPLMAAWWLLASLTNLALPPTINLVGELFVVMASFSWSNITIILMGINIIITALYSLYMLITTQRGKYTHHIKNIKPSFTRENSLMALHLLPLLLLSLNPKIILGPIY---MKVINLFTSS-ILVTLFMLTLPIMMT---NTTMYTS-KLYPQYVKTT-ISYAFMTSLIPTMMFIHSGQDMMISNWHWITIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMAMAWFLANLNTWDFQQIFMTNHE-NLNVPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTIQTITLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMVVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPFTTTSLIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLVATS-MTAAYSTRIMFFALLGQPRFNPIITINENSPLLINSIKRLLLGSIFAGFLISYNITPTTTPQMTMPHYLKTTALTVTILGFILALELNLMMQNLK--FKYPSDLFKFSNMLGYFPTTIHRLTPKMNLLMSQKSASTLLDMIWLEKVLPKSISHFQMKSSI--TTSSQKGLIKLYFMS---FMLTL--ILSLLTL----------NFHE---- +>Tragelaphus_strepsiceros_greater_kudu +----MNENLFTSFITPM-ILGLPLVTLIVLFPSLLFPTST-RLVNNRLVSLQQWAIQLVSKQMMAIHNTKGQTWALMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTMMAFITFTVLILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMIMSMF-MTLFIIFQLKVSKHNFYH-NPKPI-TTKVSKQ-NTP-W-ETKWTKTYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPVYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTPELKPGELRLLEVDNRVVLPMEVTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLEYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSTILLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGHRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYVHVGRGMYYGSYTFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGALLLVLALMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIFLPLLHTSKQRSMMFRPLSQCLFWILVADLLTLTWIGGQPVEHPYMIIGQLASIMYXLLILVLMPVTSMIENNFL---KW--------MF--------MINVLMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSVSMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTVKSLLLTISFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSMPILLASI-P-PQT--MNP-IIFTIILLTTMLGTIIVMISSHWLFIWIGFEMNMLAIIPIMMKNHTPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPVASMIMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKAPIMTVLVLVTLLSMGGLPPLSGFIPKWMIIQEMTKNDSVILPTLMAITALLNLYFYMRLAYTTALTMFPSTNNMKMKW-QFSSTKRMTLL-------PTMIVLSTMLLPLTPMLSILE---MN-LMLALLTNFSLATLLVIIAFWLPQLNSYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSLTGLLMYRSHLMSSLLCIEGMMLSLFVMAALTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLKCMLKYIIPTTMLMPLTWLSKNNMIWINPTMHALLISLTSL-LLMNQFGDNSLNFS-PTFFSDSLSTPLLILTMWLLPLTLMASQHHLSKENMTRKKLFITMLILLQLFLIMTFTAMELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALLYIQKTVGTLNFLVLQYWVQPVP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-TTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLVGELFVVVSTFSWSNMTIILMGMNMVITALYSLYMLIMTQRGKHTHHINNISPSFTRENALMALHIIPLLLLSLNPKIILGPLY------MNMFSSF-TLITLLLLTMPMMMN---S-NTHKT-SNYPLYVKTT-ISYAFFTSTIPMMMFIHTGQETIISNWHWLTIQTLKLSLSFKMDYFSTMFVPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDLQQIFMLNPE-NSNMPLLGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTATCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGVPFLTGFYSKDLIIETANTSYTNAWALLLTLIATS-FTAIYSTRIIFFALLGQPRFPTLVTINENNPLLINSIKRLLIGSIFAGFIISNSMPPMTIPQMTMPLYLKTTALAVTILGFILALEVSNMTQNLK--LHYPSNSFKFSNMLGYFPTIMHRLIPYANLTMSQKSASLLLDLIWLESILPKTTSHIQMKMSI--MVTNQKGLIKLYFLS---FLVTF--LISMILF----------NFHE---- +>Tragelaphus_imberbis_lesser_kudu +----MNENLFASFITPM-ILGLPLATLIIMFPSLLFPTSN-RLVNNRLISLQQWALQLVSKQMMTMHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTATAFITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTTIVSMF-LTLFIIFQLKISKHNFCH-NPELT--VKTPKL-NAP-W-KTKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAVSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTSTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAVILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHYNSTILLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIALGIYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG---MINIRKSHPLMKIVNNAFIDLPTPPNISSWWNFGSLLGICLVLQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALALVHLLFLHETGSNNPTGISSDTDKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHASKQRSMMFRPLSQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPAISMIENNLL---KW--------MF--------MINTLMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFTKEPLRPATSSTSMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPILLSGI-P-PQT--MNP-IISIIILSTVMLGTIIVMISSHWLFIWIGFEMNMLAIIPIMMKNHNPR-ATEASTKYFLAQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMVMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SSTWNKTPVMTVLVLVTLLSMGGLPPLSGFIPKWMIIQEMTKNDSVILPTLMAMTALLNLYFYMRLTYTTTLTMFPSTNNMKMKW-QFSTTKRMTLL-------PTMIVLSTMLLPLTPMLVILE---MN-LMLALLTNFSLASLLVIIAFWLPQLNSYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTKLNTMLTMALLLITLLAASLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMAALTTLNLHFTLANMMPMILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTAMLMPLTWLSKNNMIWINPTMYSLLISLTSL-LLMNQFGDNSLNFS-PMFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELILFYVLFEATLLPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALLYIQNTVGSLNFLVLQYWAQPMS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-TTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPLSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLMASLTNLALPPTINLIGELFVVMSTFSWSNMTIILMGINMVITALYSLYMLITTQRGKHTHHINNISPSFTRENALMSLHIIPLLLLSLNPKIILGPLY------MNMFSSF-TLITLLLLTMPVMVT---SFNIHKT-LNYPLYVKTT-IAYAFITSTIPMMMFIHTGQDMVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFILAMAWFLANLNTWDLQQIFMLNPD-NSNIPLLGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKLAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGVPFLTGFYSKDLIIEAANTSYTNAWALLLTLIATS-FTAVYSARIIFSALLGQPRFPALVTINENNPLLMNSIKRLLIGSLFAGFIISNSIPPMTVPQMTMPYYLKTAALAVTILGFISALEINNMTQNLK--LYHPSNSFKFSNMLGYFPTIMHRLIPYANLSMSQKSASTLLDLIWLENILPKTTSLVQMKMSI--MVTNQKGLIKLYFLS---FLVTI--LVSMILF----------NFHE---- +>Tragelaphus_oryx_eland +----MNENLFASFATPM-ILGLPLVTLIVLFPSLLFPTSN-RLVNNRLISLQQWALQLVSKQMMAIHNTKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTAFITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMITSMF-LTLFIIFQLKISKHNFYH-NPEPT-TTKMLKQ-NTP-W-EMKWTKTYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPVYVNL-K--------MAYPMQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTPELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSTILLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGHRYHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGMYYGSYTFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDTDKIPFHPYHTIKDILGALLLILTLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPLSQCLFWVLAADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPVTSMIENNFL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSASMFILAPILALSLALTMWIPLPMPYPLVNMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPILLASI-P-PQT--MNP-IISIIILSTIMLGTIIVMISSHWLFIWIGFEMNMLAIIPIMMKTHTPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLSNPVASMIMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLDLILTL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLTIYIIMTSTMFMLFMANSTTTTLTL---SHTWNKAPVMTILVLVTLLSMGGLPPLSGFIPKWMIIQEMTKNDSVILPTLMAITALLNLYFYMRLAYTTALTMFPSTNNMKMKW-QFSTTKRMTLL-------PTMVVLSTMMLPLTPMLLILE---MN-LMLALLTNFSLATLLVIIAFWLPQLNSYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLAASLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMAALTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTTMLMPLTWLSKNNMIWINPTMYSLLISLSSL-LLMNQFGDNSLNFS-PMFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELILFYILFEATLIPTLIIITRWGNQTERLSAGLYFLFYTLTGSLPLLVALLYIQKTVGTLNFLVLQYWVQPVP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-TTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNMTIILMGTNMVITALYSLYMLIMTQRGKHTYHINNISPSFTRENALMSLHIIPLLLLSLNPKIILGPLY------MNMFSSF-TLITLLLLTMPVMMT---SSNIHKT-PNYPLYVKTT-ISYAFFTSTIPTMMFIHTGQETIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLANLNAWDLQQIFMLNPD-NSNIPLLGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGVPFLTGFYSKDLIIEAANTSYTNAWALLLTLIATS-FTAIYSTRIIFFALLGQPRFPTLVTINENNPLLINSIKRLLIGSLFAGFIISNSMPPMTVPQMTMPFHLKTTALTVTILGFILALEINNMTQNLK--LYHPSNSFKFSNMLGYFPTIMHRLIPYANLTMSQKSASSLLDLIWLENILPKTISLTQMKMSI--MVTNQKGLIKLYFLS---FLVTI--LVSMILF----------NFHE---- +>Jaculus_jaculus_lesser_Egyptian_jerboa +----MNENLFASFITPT-LMGLPVIILIVAMPNIFIPSSN-RLLTNRVLTLQRWLIQLILKQMMAMHNNKGRSWSLMLISLIIFIGSTNLLGLSPHTFTPTTQLSMNLGMAIPLWAGAVILGFRHKTKSSLAHFLPQGTPVPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALLS-ISVPTALVTLIILILLTILEFAVALIQAYVFTLLVSLYLHDNAMPQLDTSTWFITIVSMF-LSLFVLLQTKISSFIFPP-IPSPK-FLVSQKL-ENP-W-NSKWTKIYLP-LS-LPQHS---MFVTRWLFSTNHKDIGTLYMIFAAWAGMIGTALSILIRAELGQPGALMGDDQIYNVVVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLDDTWAKIHFSVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMIMIFMIWEAFASKREVTSVELTSTNLEWLHGCPPPYHTFEEPTYVKA-Y--------MAYPFQLGLQDASSPIMEELTNFHDHTLMIVFLISSLVLYIISAMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTTDLKSGDLRLLEVDNRVVLPMELPIRMLISSEDVLHSWAMPSLGIKTDAIPGRLNQATLTSTRPGLFYGQCSEICGSNHSFMPIVLEIVPLKHFENWSLSMT----------MTHQVHPYHMVNPSPWPLTGALSALLLTSGMIMWFHFNSSTLLLIGLLTNLLTVFQWWRDVVREGTFQGHHTPMVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTHDLGGCWPPTGIIPLNPLDVPLLNTSVLLASGVSITWAHHSLMEGNRNHMIQALFITIALGLYFTILQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGTTFLLVCFFRQLNFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNESFIDLPTPSNISAWWNFGSLLGMCLIIQIATGLFLAMHYTSDTTTAFSSVAHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYTFIETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIVAALAVVHLLFLHETGSNNPIGLNSDADKNPLHPYYTIKTALGFLLMFLVLLSLVLFCPDMLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAIVPFLHNSKQRSMIFRPISQCMYWLLMADLLTLTWIGGQPVEHPFIIIGQIASILYFTIILILMPLSSMLENKIL---KW--------MH--------LLNILTLIVPILIAMAFLTLIERKILGYMQLRKGPNVVGPYGLLQPFSDAMKLFIKEPLRPNFSSTALFMIAPTLALTLALSLWIPLPMPYPLMDLNLGILFILALSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVSLAIILLSVLLLSGSYSLTSLIYSQEATWFILPTWPLAMMWFISTLAETNRAPFDLTEGESELCSGFNVEYAAGPFALFFMAEYMNIILMNALTAIIFLGSLSTLSMPEMFTLEFMTKTLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHTSLPISMSFI-P-PYS--MKI-ITNLSIILTVLSGTFIALFSSHLLLIWIGLEMSMLAIIPILTKKPSPR-STEAATKYFLTQATASMIFLASITLNFISPGLW--SFSTSSNQLCLNLATLALLMKLGLAPFHFWMPEVTQGVPLTAGLMILTWQKLAPISILYQLTPLTSTPLLLSS-GFLSIMIGGWGGLNQTHVRKILAYSSIAHMGWMIVIMPYNPSIMLINLLIYILLTLTLFISFNLHSNFTISSL---SHTWSKSPIMITSMLTVLLSLGGLPPLTGFMPKWLIINELTMNNNTYMATMMAILALLNLYFYLRLVYSSSLTLFPTSNNNKMMW-QFNSLKHSTFL-------PPLIIFSTLTLPLTSLFILPN---MN-MLLSLIINISLASILVIVAFWLPHINIYSEKIGPYECGFDPIESARLPFSMKFFLIAITFLLFDLEIALLLPLPWASQSNKLMTALAVALLLVSILALGLAYEWTQKG--LEWEE-MPLIYTSLFLAFSLSLLGTLMFRSHLMSTLLCLEGMMLAIFVSISISTLTTHNNLSFMLPIIILVFAACEAAVGLALLVTISNSHGNDYVQNLNLLQCMLKIIIPTIMLLPLTWWSKPSMLWINTTSYSFLISIITL-FSLHNHNDATHNFS-TLFFTDQLSTPLLILTSWLLPLMLIASQNHMSKETVVRKKLFISMLVTLQVSLIMTFSAAELMFFYILFEATLIPTLIIITRWGNQTERLNAGVYFLFYTLVGSLPLLVALMVKRNQLGSLNIMLLMFNSPPLN-PSL-----TNQLMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRLTIILNP-TSIDMAYPFILLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIAAIMIQTPWSFMGATALMMAHGLTSSLLFCLANTNYERIHSRTMLLARGLQSILPLMATWWLLASLTNLALPPSINFIGELYIIISSFSWSNFSIILTGINMLVTALYTLYMLIMTQRGSMSHHMKTLLPTFTRESTLMTLHLIPLILLTMNPKFIMGHLY------MNMVTSI-SILYLLILTIPTFWS---LTNPNIS--NLASYVSRT-IKYAFFLSLIPLLVYLNSGYESTITNWHWISIQPTNLMMSFKLDLYSLLFMPVALYVTWSIVEFSTWYMHADPNLNRFIKYLLIFLITMMILVSANNLMQLFIGWEGVGIMSFLLIGWWFGRSDANTAALQAVLYNRIGDIGLVLTMSWFMWKLNSWDLKYILDSNIP-IPLLPLMGLILAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVWAGVFLLVRFYPILDT-ETTKTLMLCLGSLTTLFTAICALTQNDIKKIIAFSTSSQLG--LMVVTLGIGHPYLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLAKAMPFTSTALTIGSLALVGTPFLTGFYSKDLIIESMNTSYTNAWALIITLIATS-MTAMYSLRIIFFAFMGNPRFLPVVLISESTPTMINPIKRLAAGSIFAGYLMTNLIPPLTTQQMTMPTSLKMAALVVTISGLALALELNNLTLNFT--MKISNISHNFSNQLGFYPTIIHRLLPLKNLSTSQKMAFKSLDLVWLEHSLPKLLSYFNSLASS--TTSDQKGMVKLYFLS---FLLTL--PLPLAMTLF---------------- +>Mazama_rufina_Ecuador_red_brocket +----MNENLFASFITPM-VLGLPLATLIVIFPSLLFPTSN-RLVNNRLISLQQWMIQLVSKQMMGIHNIKGQTWTLMLMSLIMFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPLWAGTVIMGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTMALTTFIILVLLTVLEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFMMITSMF-MTLFIIFQLKVSKHSFFF-NPEPK-LTGMQKQ-ITP-W-EMKWTKIYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVELTTTNLEWLNGCPPPYHTFEEPTYINL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIXWGGS--MTNIRKTHPLMKIVNNALIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLFTIMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDSDKIPFHPYYTIKDILGILLLILFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPLFHMSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFITIGQLASILYFFIILVLMPVISTIENNLL---KWT-------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLMMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IISILILSTMMLGTIIVMISSHWLFVWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPVASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYVIMTSTMFMLFMANSTTTTLSL---SHMWNKMPVMTILILVTLLSMGGLPPLSGFMPKWMIIQEMTKNNNLILPIFMAITALLNLYFYMRLTYSTTLTMFPSMNNMKMKW-QFSTMKQMTLL-------PTMVVLSTMLLPLTPILSVLE---MN-LIMALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWACQTNNLITMLTMALFLILLLAMSLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNSYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSMPLLILTMWLLPLMLMASQHHLSKETLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALVYLQNIIGSLNFLILQYWMQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGAMALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNLLSSF-MLATLLLLVIPIMAT---SSNIYKT-YNYPLYVKTA-ISYAFVTSMIPTMVFIHTGQETIISNWHWLTIQTIKLSMSFKMDYFSMMFIPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLINLNTWDFQQIFMLNPN-NSNMPMMGLALAATGKSAQFGLHPWLPSAMEGPTPVSTLLHSSTMVVAGIFLLIRFYPLTENNKFAQSTLLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPFLTNSIKRLMIGSLFAGFIISNNIPPTTIPQMTMPPYLKMMALTVTILGFILALEISNMTQNLK--FNYPSNAFKFSNMLGYFPTIIHRLTPYMNLTMSQKSASSLLDLIWLENILPKTTSLMQMKMSI--MVTSQKGLIKLYFLS---FLITI--IISMILL----------NFHE---- +>Ourebia_ourebi_oribi +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLMNNRLISLQQWVLQLVSKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKISKHKFYH-SPEMT-STKTSKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNETWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYINL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDVIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGIYYGSYTFLETWNIGVVLLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALATVHLLFLHETGSNNPTGISSDADKVPFHPYYTIKDILGAFLLILALMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPVSQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPAASTIENNLL---KW--------MF--------MINILTLIIPILLAVAFLTLVERKILGYMQFRKGPNVVGPYGLLQPFADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLTTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSGI-P-PQT--MNP-IIFIIILMTVMLGTTIVMISSHWLLIWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLVIYIIMTSTMFMLFMTNSTTTTLSL---SHTWNKAPIMTVLVLVTLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPITKRMTLL-------PTMVTLSTMMLPLTPILSILE---MN-LMLTLLINFTLATLLVTIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNMMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVFMNIMMAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWVNSTMHSLLISLTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLVLTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIFIQNTMGSLNFLILQYWVEPTP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-TTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSAFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLATLFLLTMPI-MT---SLNTHKT-YKYPLYVKTT-ISCAFLTSMIPTMMFIHTGQEMVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSLWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTSLNTWDLQQIFMLNPN-DSNMPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAMTTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKPMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLVATS-FTAIYSTRIIFFALLGQPRFPALIIINENNPFLMNSIKRLMIGSLFAGFIISNSIPPMTTPQMTMPYYLKTTAMAVTILGFILALEMSNMTYNLK--FNYPSNTFKFSNLLGYYPTVMHRLTPYMNLMMSQKSASSLLDLIWLENILPKTTSLIQMKMST--MITSQKGLIKLYFLS---FLITI--LISTVLL----------NFHE---- +>Oryx_dammah_scimitar-horned_oryx +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLSPTSN-RLINNRLISLQQWMLQLVSKQMMSIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVITETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTAFITFIVLILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQMKIAKHNFYY-NPELA-SMGTPKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNMTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTIPSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPAYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSSWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDVIQESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTIFMATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNVGVILLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDTDKIPFHPYYTIKDILGALLLILVLMLLVLFTPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSIPILVLVPALHTSKQRSMMFRPISQCIFWILVADLLTLTWIGGQPVEHPYIIIGQLASITYFLLILVLMPVASTIENNLL---KW--------MF--------MVNILMLIIPILLAVAFLTLVERKILGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQTWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPILLSSI-P-PQT--MNP-IIFTIILTTIMFGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKYNPR-ATEASTNYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLVTAALTMKLGMAPFHFWVPEGTQGISLSSGLILLTWQKPAPVSVLYQISPPINLNLILSL-SILSIMIGGWGGLNQTQLQKIMAYSSIARMGCMTAALRPNPTTMPLNPVTCVIKTSPMSTLFMAHSATATRSL---SHPRTKAPMITALVPGTLLSTGGLPPLSGFMPKWVIIQEMTKNDNSILPTLMAITALLSLYFYMRLTYSTTLTMFPSTNNMKMKW-QFSTMKQMTLL-------PTTGVLSTKLLPLTPILSILE---MN-LMMALLTNLTLTTLLVTIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLILLLAVSLAYEWTQEG--LEWTE-MSLMHMNIMMAFAVSVTGLLMYRSQLMSSLLCLEGMMLPLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYMQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTLHSLLISLTSL-LLMNQFNDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFISMLILLQLFLIMTFTAAELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALMHVQNTVGSLNFLILQYWVQPMP-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLILNP-VTDFMAYPFIMLSLWGMIVTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKHTHHINSISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-ALMTLLLLTVPIMMT---SSSTRKT-PNYPFYVKTT-VSCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSILEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLEPN-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLIQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFMTLININENNPFLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPHYLKLTALMVTILGFILALEISNMTHNLK--FNYPSNTFKFSNLLGYYPTIMHRLTPHMSLTMSQKSASSLLDLIWLENILPKTISSTQMKMST--MITNQKGLIKLYFLS---FLITI--LTSTVLL----------NFHE---- +>Kobus_leche_lechwe +----MNENLFASFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLVNNRLISLQQWALQLVSKQMMNIHNPKGQTWTLMLMSLILFIGSTNLMGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASFAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTVILSMF-LTLFIIFQLKISKHNFYH-NPEST-SMKTLKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPTYVNP-K--------MAYPMQFGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLELVPLEYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNTTTLLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNMRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYIFLETWNIGVILLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAAITMVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGALLLVSTLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPTASTIENNLL---KW--------MF--------MINILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSVSMFILAPILALGLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIVTQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYVPELYTINFIIKTLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILTSSI-P-PQT--MNP-IIFIIILMTVMLGTVIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPVASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNMILTM-SMLSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKTPIMTVLVLITLLSMGGLPPLSGFMPKWLIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPSMKQMTLL-------PTMTVLSTMLLPLTPILSILE---MN-LMLALLTNFTLATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTSLKTMLTMALFLIILLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLAGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILSSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWLSKSNMIWINSTMYSLLISLTSL-LLMNQFIDNSLNFS-MVFFSDALSTPLLILTMWLLPLMLMASQHHLSKENLVRKKLFITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIHVQNTVGTLNFLILQYWVQPMP-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLIMTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MKMFSSF-TLVTLLLLTVPIMMT---NSNIYKS-PKYPLYVKTT-ISYAFITSMIPTMMFIYTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHADPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLMNLNTWDLQQIFTLESN-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSTMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFSALILINENNPFLINSIKRLLIGSLFAGFIISSNIPPITIPQMTMPHYLKMTALMVTILGFILALEISNMTHNLK--FNYPSNTFKFSSLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLMWLESILPKTTALFQMKMST--TVTNQKGLIKLYFLS---FLVTI--LVSTLLL----------NFHE---- +>Cervus_nippon_sichuanicus_Sichuan_sika_deer +----MNENLFASFITPM-MLGLPLATLIVMFPSLLFPTSN-RLVNNRLISLQQWMLQLVSKQMMGIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLMHLIGGAALALMN-ISTTMAFITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LALFIIFQLKISKHNFHF-NPELT-LTKTQKQ-NTP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPSLTVKAMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGILLLMLFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPFLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIIIGQLASILYFFIILVLMPITSTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPVLPELYTINFTMKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFTSSI-P-PQT--MNP-IIFILILSTMMMGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEAATKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMFMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTILVLMTLLSMGGLPPLSGFMPKWMIIQELTKNDSLILPTIMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSILE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVALAGLLMYRSHLMSSLLCLEGMMLSLFVMASLTILNSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNITGSLNFLVLQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSFYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-TLVTLLLLTIPIMTT---SSDNYKT-SNYPLYVKTT-ISYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFALTPN-NSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTIPQLTMPHYLKMMALTVTVLGFILALEISNMTQNLK--FNYSTNIFKFSNMLGYFPTIMHRLAPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQTKMSI--MVTNQKGLIKLYFLS---FLVTI--TISMILF----------NFHE---- +>Nannospalax_ehrenbergi_Ehrenbergs_mole-rat +----MNENLFASFATPT-LMGLPIVIPIIMLPTLFFKTTN-KLINNRVTTAQQWLIKLITKQMMFTHSPKGRTWSLMLTSLIIFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPMWAGAVILGFRHKTKASLAHFLPQGTPIILIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLTT-ISPSTASITFLILTMLTILELAVAMIQAYVFTLLVSLYLQDNTMPQLDTSTWSTVIMASL-VTLFIILQLKLSLFSLTP-APSLK-QTKLNKT-HNP-W-DKKWTKIYLP-LS-LPLH----MFITRWLFSTNHKDIGTLYLMFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVVVTRHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAVTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFIHWFPLFTGFSLSETWAKIHFAVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNVISSMGSFISLTAVMIMVFMVWEAFASKREVEAVELASTNLEWLHGCPPPYHTFEEPTYVKV-N--------MAYPLQYGLQDATSPIMEELMNFHDHTLMIVFLISSMVLYVITAMLTTRLTHTNTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPALTVKAMGHQWYWSYEYTDYEDLNFDSYMIPTSELKPGELRLLEVDNRVVLPVELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATITSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSSTMV----------MTHQTHAFHMVNPSPWPLTGALSAFLLTSGLIMWFHFNSFILLTIATAGNILTMYQWWRDVVREGTFQGHHTPPVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGINPLNPIEVPLLNTAVLLASGVSITWAHHSLMEGKRNHMIQALLITIILGLYFTLLQASEYLEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLLTCLLRQLNFHFTSKHHFGFEAAAWYWHFVDVIWLFLYVSIYWWGS--MTNLRKSHPLIKIINHSLIDLPTPSSISTWWNFGSLLGVCLGLQIITGLFLAMHYTSDTLTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGIYYGSYHFKETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMVHLLFLHETGSNNPSGLDSNADKIPFHPYFTIKDTLGALMLTIILMSLVLFYPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPMLHTSTQRSLTFRPISQLLFWMLVADLITLTWIGGQPVEHPFIIIGQVASILYFSIILILMPLAGLVENTIM---KL-------------------MNMLALLLPILVAMAFLTLVERKTLGYMQLRKGPNVVGPYGVLQPFADAMKLFTKEPLKPLTASLTLFIIAPTLALTLALSLWIPLPMPYPLLNLNLGTLFILATSSLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLLSGSFSLLSVISSQELTWFLLPTWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFLGTVYNPHNPELFTLNFMLKTLILTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISMPMTMASI-P-PYT--MNI-LALTIILLTIFVGSIITILSNHLILMWAGLEMSMLAIIPVLMFNSNPR-STEAATKYFLIQATASMILLLAIILNYHDLGIW--QFHHNTQFYIYSLVLIALMMKLGLAPFHFWVPEVTQGVPILSGLLLLTWQKIAPLAIMFHISYYLNTTMVPLS-ALMSVFIGGWGGLNQTQLRKILAYSSIAHMGWMVAVTMYNPTMMLLNLVIYMFLTTSMFITVYICTSTSISSF---TKMWNKSPLLISTTLIILMSLGGLPPLTGFLPKWMIIIELTKNNCIFMALSMTMMALLNLYFYTRLIYASSMTAFPTSNNMKTNT-HHQNNKKHPLL-------SPLIIISSLALPLSPLVSSLY---MN-LLITMMTNISLSMVLVSVAFWLPQLNLYSDKASPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPIPWAIQYGNLTGVVLTTLGLLIILALGLMYEWFNKG--LEWTE-MTPVFFNLLLTFILSLLGALMFRSHLMSTLLCLEGMILSLFTMTSLITLNTNSMLSFIIPIIILVFAACEAAVGLALLVMVSNTYGTDYVQNLNLLQCMLKIILPSIMLLPLTWFTNNKMVWTNTTCYSLMISLISL-SLLHQDSTNSYNFS-TTFFSDPLSTPLVILTTWLLPLTLLASQNHLSKEQENYKKMYISLLTLLQVFLIMTFTATELMLFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLISLINFNNTFGTLNLVLLSLKQPALS-QSW-----SNHILWLAFMLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISILLDM-VNKTMAYPFIMLSLWGMVMTS--SICMRQTDLKSLIAYSSVSHMALVIVAVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERTHSRTMMLAQGLQTIFPLMGVWWMLGSLANLALPPSINLIGELLIITSSFSWSNLSILMMGTNMIMTAAYTFYMLITSQRGKLTNHTKFLPPTQTRESTIMSLHIIPIILISINPKLILGLP-------MNINVSM-NLLILTTLTTPLLLS---LTNKYNS-NSYPKHVVNS-IKLSFLFSLLPLLTFLSNNNELITSNWHWMTINSIKLAMSFKFDYFSYLFIPVALFVTWSITEFSSWYMHSDPNLNRFMKYLLMFLMTMIILVSANNLFQLFIGWEGWGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLILSMAWFTIHTNSWELQQIFILTTN-TDILPLLGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLMTRFYPLTQNNQTILTLTLCLGAMTTLFTAMCALTQNDIKKIVAFSTSSQLG--LMFVTLGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPFTSSCLTIGSLALTGMPFLTGFYSKDLIIETLNTSNTNAWALLITLIATS-MTAVYSTRIIFFVVMSKPHFTPTITINENNPQLINPISRLALGSILAGFMITSNLPPTNIPTMTMPLPLKSMAITISILGFTIAMDLNNLTSTLT--HKSPTTTHKFTTLLGFFPSIIHRLLPIKSLTMSQNMASNLMDLIWLEKAIPKMIANTQMTASI--ITSNQKGLIKLYSLS---FLMNI--TIISLLTLT--------YYLE---- +>Pantholops_hodgsonii_chiru +----MNENLFTSFITPM-MLGLPLATLIVLFPSLLFPTSN-RLINNRLISLQQWMLQLVSKQMMSIHNIKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKISKHNFYY-NPEPS-LTKMLKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTVWNTISSMGSFISLTAVMVMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPVYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTIGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLTTNTLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRIPMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFVDLPAPSNISSWWNFGSLLGICLVLQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYIFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGAMLLILILMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLVPFLHMSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVLMPVASTIENNLL---KW--------MF--------MINILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALGLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQMWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTVNFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSGI-P-PQT--MNP-IISIIILMTVMFGTIIVLISSHWLFIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVTKLFNSTASMLMTMALAIKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLDLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKMPIMTVLVLTTLLSMGGLPPLTGFMPKWMIIQEMTKNNSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQTIFL-------PTMTVLSTMLLPLTPILSILE---MN-LMLTLLTNFTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMTAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTTMLMPLTWLSKGNMIWINSTLHSLLISLTSL-LLLNQFSDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFISMLILLQLFLIMTFTATELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIHIQNTIGSLNFLILQYWVQPMP-NSW-----SSTFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSTITIILMGLNMVITALYSLYMLITTQRGKFTHHINNIPPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLFLLTMPIMMT---GFNTHKT-INYPLYVKTT-ISCAFITSMVPTMLFIHTGQEMVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLKPN-NSNLPLMGLVLAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTPNDIKKIIAFSTSSQLG--LIMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPLLINSIKRLLIGSLFAGFFISNNIPPMTIPQMTMPHYLKLTALMVTILGFILALEINSMTHNLK--FNYPSNIFKFSNLLGYYPTIMHRLAPYMNLTMSQKSASSLLDLIWLETILPKTISQAQMKMST--MLTNQKGLIKLYFLS---FLVTI--LISMLLL----------NFHE---- +>Equus_zebra_hartmannae_Hartmanns_mountain_zebra +----MNENLFASFATPT-MMGLPIVILIVMFPSILFPSSN-RLINNRLTSIQQWLVQLTSKQMMAIHNSKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVFMGFRHKTKAALAHFLPQGTPIFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISPSTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFINIVSMI-LTLFIVFQLKISKHSYPT-HPEAK-TTKMTKH-LTP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLALPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMIWEAFASKREVSTVELTSTNLEWLHGCPPPYHTFEEPAYVNL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISSMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLVASRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEEWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTLLLALGLLTNILTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMLQGLFITISLGVYFTLLQASEYYEASFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHETGSNNPSGIPSDMDKIPFHPYYTIKDILGLLLLILLLLTLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALIPTLHMSKQRSMMFRPLSQCVFWLLVADLLTLTWIGGQPVEHPYVIIGQLASILYFSLILIFMPLASTIENNLL---KW--------MF--------MINVLLLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADALKLFIKEPLRPLTSSTSMFIIAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLITTQEYLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNIFTTTLFLGAFHNPYLPELYSINFTIKALLLTCSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMLSSI-P-PQT--MNP-LIFTIILMTVFLGTMIVMTSSHWLMIWIGFEMNLLAVIPILMKKYNPR-AMEASTKYFLTQATASMLLMMAIIINLMYSGQW--TITKIFNPTASIIMTSALAMKLGLTPFHFWVPEVTQGISLTSGLILLTWQKLAPMSILYQISPSINLNILLTM-AALSILVGGWGGLNQTQLRKIMAYSSIAHLGWMTAVLAYNPTLTMLNMLIYITMTLTMFMLFTHSSSTTALSL---SHTWNKTPLTTTLILITLLSMGGLPPLSGFMPKWMIIQELTKNSSIILPTLMAIMALLNLYFYMRLTYSTSLTMFPSMNNMKMKW-QFE-TKQITLL-------PPLIIASSLLLPLTPMLSILD---MN-LMLTLLTNTLLASLLVLIAFWLPQLNIYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLIMALILISLLAISLAYEWTQKG--LEWTE-MSLVHINIFLAFTVSLMGLLMYRSHLMSSLLCLEGMMLSLFVMATMMVLNTHFTLANMMPIILLVFAACEAALGLSLLVMVSNTYGVDHVQNLNLLQCMLKIIIPTIMLMPLTWLSKKNMIWINTTTYSLLISLISL-SLLNQPNNNSLNFS-LMFFSDPLSAPLLVLTTWLLPLMLMASQHHLSKEPLIRKKLYITMLVTLQTFLIMTFTATELISFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALISIQNLTGSLNFLLIQYWNQALP-NSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTMLNP-QTNFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSNITIILMGANITITALYSLYMLITTQRGKYTHHINNIKPSFTRENALMALHMTPLLLLSLNPKIILGFTY--------MFSSL-MLISLSVLTLPIMSS---ILSTHKN-STYPHHVKNI-ISYAFITSLIPTMMFIHSGQETIISNWHWMTMQTLKLSLSFKLDYFSMVFVPVALFVTWSIMEFSLWYMHSDPYITRFFKYLLTFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYSRTDANTAALQAILYNRIGDIGFIMAMAWFLFNTNTWDLQQIFMLNPD-LTNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQSLTLCLGAITTLFTATCALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFNAMPFTTTSLIIGSFALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-LTAVYSTRIIFFALLGQPRFLPLTPINENNPFLINSIKRLLIGSIFAGFFISNNIYPTTVPEMTMPAYMKLTALAVTILGFALALELSLITHNLK--LEYPTNMFKFSNLLGYYPTIMHRLPPLANLSMSQKSASLLLDSIWLESILPKSISQFQMKTSI--LISTQKGQIKLYFLS---FLITL--TLSMLLF----------NLHE---- +>Equus_hemionus_kulan_kulan +----MNENLFASFATPT-MMGLPIVILIIMFPSILFPSSN-RLINNRLISIQQWLIQLTSKQMMAIHNNKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVFMGFRHKTKAALAHFLPQGTPIFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISPSTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFINIVSMF-LTLFIVFQLKISKHSYPT-HPEAK-TTKMTKH-LTP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLALPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMIWEAFASKREVSTVELTSTNLEWLHGCPPPYHTFEEPAYVNL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISSMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLVASRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEEWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTLLLALGLLTNILTMYQWWRDIIRESTFQGHHTSIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMLQGLFITISLGLYFTLLQASEYYEASFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHETGSNNPSGIPSDMDKIPFHPYYTIKDILGLLLLILLLLTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALIPTLHMSKQRSMMFRPLSQCVFWLLVADLLTLTWIGGQPVEHPYVIIGQLASILYFSLILIFMPLASTIENNLL---KW--------MF--------MINVLLLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADALKLFIKEPLQPLTSSTSMFIIAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLIITQEYLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNIFTTTLFLGAFHNPYLPELYSINFTIKALLLTCSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMLSSI-P-PQT--MNP-LILTIILMTVFLGTMIVMMSSHWLMIWIGFEMNLLAIIPILMKKYSPR-AMEASTKYFLTQATASMLLMMAIIINLMHSGQW--TITKVFNPTASIIMTSALAMKLGLTPFHFWVPEVTQGISLTSGLILLTWQKLAPMSILYQISPSINLNILLTM-AMLSILVGGWGGLNQTQLRKIMAYSSIAHMGWMTAILAYNPTLTMLNMLIYIMMTLTMFMLFIHSSSTTTLSL---SHTWNKTPLTTTLILITLLSMGGLPPLSGFMPKWMIIQELTKNSSIILPTLMAIMALLNLYFYMRLTYSTSLTMFPSMNNMKMKW-QFE-TKQITLL-------PPLIVASSLLLPLTPMLSILD---MN-LMLTLLTNTLLASLLVLIAFWLPQLNIYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLIMALILISLLAISLAYEWTQKG--LEWTE-MSLVHINIFLAFTISLVGLLMYRSHLMSSLLCLEGMMLSLFVMATMMVLNTHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGVDHVQNLNLLQCMLKIIIPTIMLMPLTWLSKKNMIWINATTYSLLISLISL-SLLNQPNNNSLNFS-LMFFSDPLSAPLLVLTTWLLPLMLMASQHHLSKEPLIRKKLYITMLAMLQTFLIMTFTTTELISFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALISIQNLTGSLNFLLIQYWNQALP-DSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTLLNP-QTNFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVVSSFSWSNITIILMGANITITALYSLYMLITTQRGKYTHHINSIKPSFTRENALMALHMTPLLLLSLNPKIILGFTY--------MFSSL-MLVSLSMLILPIMSS---ILNTHKN-SAYPHHVKNI-ISYAFITSLIPTMMFIHSGQETIISNWHWVTMQTLKLSLSFKLDYFSMVFVPVALFVTWSIMEFSLWYMHSDPYITRFFKYLLTFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFIMAMAWFLFNTNTWDLQQIFMLDPS-LTNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQSLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFNAMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-LTAVYSTRIIFFALLGQPRFLPLTSINENNPLLINSIKRLLIGSIFAGFFISNNIYPTTVPEMTMPTYMKLTALAVTILGFTLALELSLTTHNLK--MERPTDMFKFSNLLGYYPTIMHRLPPLTNLSMSQKSASLLLDSIWLESILPKSISQFQMKTSI--LISTQKGQIKLYFLS---FLITL--TLSMLLF----------NLHE---- +>Thylacinus_cynocephalus_Tasmanian_wolf +----MNKNLFASFICPN-IMGLSTLPIIIMLPCLMFTAPK-RWLPNRIQILQIWLIRLITKQMMSMHSKLGRTWSLMLISLILFIASTNLLGLLPYSFTPTTQLSMNLGMAIPLWMGTVILGLRKKPKASLAHFLPQGTPTPLIPMLIIIETISLFIQPIALAVRLTANITAGHLLMHLIGSATLALAS-INIMISSITFTILLLLTILELAVAIIQAYVFTLLVSLYLHDNSMPQLNTTSWFFVISIAT-LSLFCIFQLNLVGIEMIYIYPPEE-VLKLPEI-PFP-W-EKKWTKIYLP-LS-SVLTS---MFINRWLFSTNHKDIGTLYLLFGAWAGMIGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTIEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPALSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYAGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWSLGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNEMWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNVLSSIGSFISLTAVILMIFIVWEAFASKREVSKVEMTMTNIEWLYGCPPPYHTFEQPVFIKI----------MPYPTQLGLQDATSPIMEELMYFHDHTLMIVFLISSLVLYVLLLMLTTKLTHTSTMDAQEVETIWTIMPAVILVLIALPSLRILYMMDEIFNPYITVKAIGHQWYWSYEYTDYDNLSFDSYMVPTQDLLPGQFRLLEVDNRMVLPMELPIRMLISSEDVLHAWAVPSLGLKADAVPGRLNQATLTSTRPGVYYGQCSEICGSNHSFMPIVLEMTTLKYFVKWSWLMQ----------MAHQTHAYHMVNPSPWPLTGALSALLLTSGLAMWFHFHSLTLIMFGLTSMLLTMFQWWRDIVREGTYQGHHTPVVQKGLRYGMILFITSEIFFFLGFFWAFYHSSLSPALELGGCWPPTGVRPLNPLEVPLLNTAILLASGVSITWAHHSLMESNRKQTIQALSVTIILGLYFTILQATEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSLFLMVCLMRQLFYHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MKILRKTHPILKTINHSFIDLPTPSNISAWWNFGSLLGICLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRNLHANGASMFFMCMFLHVGRGIYYGSYLYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLIFLHETGSNNPSGINPNSDKIPFHPYYTIKDILGLMIMLFILISLALFSPDMLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALITSILILLIIPMLHTSNQRSMMFRPFSQTLFWILTANLLTLTWIGGQPVEQPFIIIGQLASIMYFLTIIILMPLAGLLENYMLE-PK---------MF--------TLNLFLYIIPILLAVAFLTLIERKVLGYMQFRKGPNIVGPYGLLQPFADAIKLFTKEPLQPLTSSWSMFILAPILALTIALTIWTPLPMPNALLDLNLGLLFILSMSGLSVYSILWSGWASNSKYALVGALRAVAQTISYEVTLAIILLSVMLINGSYTMKTLSITQENLWLIFTTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYASGPFAMFFLAEYANIIAMNALTTILFLGSSMSLLTPNINTLIFVIKTLLLTITFLWIRASYPRFRYDQLMYLLWKNFLPLTLALCLWFISMPISMSCI-A-PQM--MSP-YTLTMVSLSLFLGTCLTLSSNHWFTAWMGLEINTLAIMPVMTSPNNPR-STEATTKYFLTQATASMIMMFAIVYNAWTTDQW--TMFNLSDDWASTFMTIALAMKLGLAPFHLWVPEVTQGIPLLSGMILLTWQKIAPTSILYQISPCLNMEIMMSL-AILSAILGGWGGLNQTHLRKILAYSSITHMGWMTIIVNINPTLTVVALIIYMAATITLFMTLNYSTITKIKSL---ANLWNKSAPIAFIIMLTLLSLGGLPPLSGFSPKWLILHELASNNNAVAAIVMALSALLNLFFYMRIMYVSTLTIFPYTNTCKMQW-YFNSTKPTCTI-------PTMTIISFLLLPLTPMFSIFM---MN-LILMLIINFSLATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQLTSTKTTLILSYSLIILLTSGLAYEWFQKG--LEWTE-MLPIYFNLTMTFSLALMGVLIYRSHMMSTLLCLEGMMLSLFIMMALLITQFHMFSISMIPLILLVFSACEAGVGLALLVKISGTHGNDHIHNLNLLQCMLKILIPTLMLIPLTWLSKKPWLWTNLTVHSLLISVWSL-TLLNNSMDLGYNYN-NSMFIDSLSSPLIVLSCWLLPLMIIASQNHLMDEPSNRKKTYLTMLIILQLSLIMAFSSSELIMFYIMFESTLIPTLIIITRWGNQNERLNAGIYFIFYTLTGSLPLLVALIYLYHKMGSLHMPMMSIMNMTLD-SSM-----SSSLLWYACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGIMRMTAFTEP-LTTNLCYPFMTLSMWGMVMTS--SICMRQTDLKALIAYSSVSHMALVIVAALMQTPMSFMAATTLMIAHGLTSSMLFCLANSNYERIHSRTLLLARGLQTVLPLMCTWWLIASLANLALPPSINLIGELMVIMTSFSWSNMTIILLGINTVITALYSMYMFTTSQRGKLSQHLYSTKPTLTREHLLMVLHLIPLLIMSINPKFILGPTY---MKVINHIFNSMLIMSIITLMSPLAYN---MINPNKT-TNFPSLCKNA-VKSAFFMSLIPLTLFIHMDQESMVTNWQWLSLGTLTINMSFKMDYFSVVFLPIALYITWSIMEFSMWYMHSDPDIHRFSKYLIMFLLTMTILVSANNLFQLFIGWEGVGIMSFMLIGWWYGRTDANTAAMQAILYNRIGDIGFMLSMAWFMMNNNSWNLQHIFMTDID---SLALMGLIIAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLLEKNQMALTMTLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTMGLNQPHLAFLHICTHAFFKALLFMCSGSIIHSLNNEQDIRKMGGLLKLLPITSSATILGSMALTGMPFLSGFYSKDSIIEALNTSYINSWALSITLIATM-TTAMYSMRMISLALLEEPRFTTMSPINENNPNLIKPIMRLTLGSIFAGFFITMNIPPTIVIPMAMPMSTKLCALTVSILGIVIMLELSYLANNMH--NISIKHSYYFSNSLGYFSFIFHRLNPMMSLLLGQHIATLLIDLNWFEKTGPKGQTNLHTYSSS-SITSTQKGMMKTYFLS---FLISM--ILMLPITLL---------------- +>Ovibos_moschatus_muskox +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWMLQLVSKQMMSIHNIKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTAFITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKISKHNFYY-SPELT-TTKTPKQ-NTP-W-EMTWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGPSVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIIALMLTTKLTHVSTMDAQEVETIWTIMPAIILITIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLEYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMILLALGLTTNMLTMFQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIMLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTNIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNMGVILLLMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIVALAMVHLLFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGAMLLILTLMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILALVPFLHTSKQRSMMFRPISQCMFWMLVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVLMPMASTIENNLL---KW--------ML--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTVTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFSTMLMTVMLGTIIVMTSSHWLFIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVVINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKAPIMTVLILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKRMTLL-------PTMTVLSTMLLPLTPILSILE---MN-LMITLLTNFMLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFAMSLMGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTLHSLLISLTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESLARKKLFISMLILLQLFLIMTFAAAELIFFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYIQNTMGSLNFLILQYWVQPMP-NSW-----SNTFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTDFMSYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELLVMMSTLSWSNITIILMGFNMVLTALYSLYMLITTQRGKYTHHINNISPSFTRENALMALHMLPLLLLSLNPKIILGPLY------MNLFSSF-TLMTLILLTAPLMAT---NLNTYKP-SNYPLYVKTT-ISYAFIISMIPTMMFIHTGQETVISNWHWLTIQTLKLSMSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFALKPE-NSNLPLLGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFSTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFTLLGQPRFPALITINENNPFLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPHYLKMTALAITALGFILALEISNMTYLLK--FNYPSNIFKFSNLLGYYPTIMHRLTPYTNLTMSQKSASSLLDLIWLETILPKTISMTQTKMST--VVTNQKGLIKLYFLS---FLITI--LISMILF----------NFHE---- +>Ovis_canadensis_bighorn_sheep +----MNENLFASFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWILQLVSKQMMSIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-INITTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMIMSMF-LVLFIIFQLKISKHNFYH-NPELM-TTKAPKQ-NTP-W-ETKWTKIYLP-LL-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELQPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLILGLTTNMLTMYQWWRDVIRESTFQGHHTPVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRYHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFMIAALAMVHLLFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGAILLILVLMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVMMPVASIIENNLL---KW--------MF--------MINVLTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSTSMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-TIFIIILMTVMLGTIIVMISTHWLLIWIGFEMNMLAIIPIMMKKHSPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPMASMLMTTALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTL-SILSITIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTFTMFTLFMANSTTTTLSL---SHTWNKAPIMTILVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPTTKRMTLL-------PTMTVLSTMLLPLTPILSILE---MN-LMITLLTNFTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFILATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLRCMLKYIIPTMMLMPLTWLSKNNMIWINTTLHSLLISLTSL-LLLNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLARKKLFISMLVLLQLFLIMTFTATELIFFYIMFEATLIPTLIIITRWGNQTERLNVGFYFLFYTLTGSLPLLVALIYIQNTTGSLNFLILQYWVQPMP-NSW-----SSTFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITLLLNP-ITDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKHTHHINNVLPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSL-TLVTLILLTVPIMTI---NFNTHKS-TNYPLYVKTT-ISCAFITSMIPSMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPN-NSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAMTTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFVLLGQPRFPTLININENNPFLINSIKRLLIGSLFAGFIISNNIPPMTIPQMTMPHYLKMTALTVTILGFILALEISNTTHYLK--FNYPSNMFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLETILPKTISLAQMKMST--TITNQKGLIKLYFLS---FLITI--LISTTLL----------NFHE---- +>Naemorhedus_caudatus_Long-tailed_goral +----MNENLFTSFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWVLQLVSKQMMSIHNIKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHLLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTVILSMF-LTLLIIFQLKISKHNFHY-TPELT-TTKTPKQ-NNP-W-EMTWTKIYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLTTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIIALMLTTKLTHVSTMDAQEVETIWTIMPAIILITIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMILLALGLTTNMLTMYQWWRDIIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSGLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWG---MINIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGLSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGAMLLILTLMLLVLFTPDLLGDPDNYTPANPLSTPPHIKPGWYFLFAYAILRSIPNKLGGVLALVLSILILAIVPLLHTSKQRSMMFRPISQCLFWTLMADLLTLTWIGGQPVEYPYIIIGQLASIMYFFIILVLMPVASTIENNLL---KW--------ML--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSVSMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINLTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILMTVMFGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMFMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQTLPSINLDLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIMMTSTMFMLFMANSTTTTLSL---SRTWNKAPIMTVLILITLLSMGGLPPLSGFMPKWMIIQEMTKNNNIILPTFMAITALLNLYFYMRLTYSTALTMFPSTNNLKMKW-QFSTTKRXTLL-------PTMTVLSTMLLPLSPILSILE---MN-LMITLLTNFTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLCTMLTTALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFAMSLMGMLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWLSKNNMIWINPTLHSLLISLTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFISMLILLQLLLIMTFTATELIFFYITFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIHIQNVIGSLNFLILQYWVQPMY-NSW-----SNTFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRISLLLNP-MTDFMSYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVMASTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMALHMLPLLLLSLNPKVILGPLY------MNLFSSF-TLTTLILLTAPIMAT---NLNTYKS-SNYPLYVKTT-ISYAFITSMIPTMMFIHTGQETIISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLANLNTWDLQQIFMLKPD-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLMQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFTLLGQPRFPTLITINENNPLLINSIKRLLIGSLFAGFIISNSIPPMMIPQMTMPYYLKMAALAVTALGFILALETSNMTYNLK--FNYPSNIFKFSNLLGYYPTIMHRLAPYTSLTMSQKSASSLLDLIWLETILPKTISTAQVKMAT--MITNQKGLIKLYFLS---FLITI--LISMILF----------NFHE---- +>Leopoldamys_edwardsi_ +----MNENLFASFITPT-MMGLPIVVTIIMFPSILFPSSE-RLISNRLHSFQHWLIKLIIKQMMLIHTPKGRTWALMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVILGFRHKLKNSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMD-ISPPTATITFIILLLLTMLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIVSSM-ITLFILFQLKVSSQTFPA-APSPK-IMATEKT-KTP-W-ESKWTKIYLP-PS-SLQQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDTWAKAHFIVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVLIMIFMIWEAFASKREVLSISYPSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAHPFQLGLQDATSPIMEELTNFHDHTLMIVFLISTLVLYIISLMLTTKLTHTNTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTNDLKPGELRLLEVDNRVVLPVELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFEDWSASMI----------MTHQTHAFHMVNPSPWPLTGALSALLLTSGLVMWFHYNSSILLSLGLLANMLTVYQWWRDIIREGTYQGHHTPVVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTHDLGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITILLGLYFTVLQASEYFETSFSISDGVYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLFKIINDSFIDLPTPSNISSWWNFGSLLGVCLMVQIITGLFLAMHYTPDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGMYYGSYTFMETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWLWGGFSVDKATLTRFFAFHFILPFIIAALVIVHLLFLHETGSNNPTGLDSNADKIPFHPYYTIKDLLGVLILLMFLMSLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAFLPFLHTSKQRTLIFRPITQALYWILVANLFILTWIGSQPVEHPFIIIGQLASISYFSIILILMPISGIIEDKML---KWN-------MY--------FINILTLLLPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFVKEPTRPLTTSISLFIIAPTLSLTLALSLWIPLPMPHPLINLNLGMLFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQMLITTQEHTWLLLPTWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFMAEYTNIILMNALSSIVFMGPLYYTNYPELYSISFMVETLFLSTVFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISVPIFLAGI-P-PYM--MNP-ITLIIIYFTIFMGPVITMSSTNLLLMWVGLELSLLAIIPLLINKKNPR-STEAATKYFITQATASMIILLTMVLNYKQLGMW--EFQQQTNNILLSLVLISLSMKLGLAPFHYWLPEVTQGVPTHIGLILLTWQKIAPLSILFQISHLLNPTITSIL-AISSILIGAWGGLNQTQTRKIMAYSSIAHMGWMMAILPYNPNLMLLNLIIYIFLTVPMFLTLMMSSSTSINSI---SLSWNKTPTILVMTSLVLLSLGGLPPLTGFLPKWVIISELLKNDSSTMPTLMAMMALLNLFFYMRLIYSTSLTMFPINNNSKMIT-HHPIQKYTFIM-------PTLTVISTLTLPLSPQLIM-----MN-LLIIITTNILLASILVSIAFWLPQMNLYCEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTTNILTMTTTAFILITILALGLSYEWTQKG--LEWTE-MTSIFFNLTLAFTLSLLGTLVFRSHLMSTLLCLEGMMLSLFIMTSMSTLNFNSMISMPIPITILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLTWLSPNKKTWTNVTSYSFLVSLLSL-SLLWQNDENHLNFS-ITFSSDPLSTPLIILTTWLLPLMILASQNHMKKESLIYQKLYISMLISLQILLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLVGSIPLLIALLSIQNSMGTLNSLILSLMAHPLN-STW-----SNNILWLACMMAFLIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRVSIILDP-LTKSMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAIMIQTPWSFMGATMLMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMIFPLMATWWLLASLANLALPPLINLMGELFIVMSMFSWSNPSIILMAINIIITAMYTMYMIITTQRGKPANHMNNLQPSHTRELTLMALHIIPLILLTINPKLITGLTL------MNMMTSS-ILMILLLLTTPIIMT---LTNLIKF-INYPSYATSS-IKISFFLSLLPLLLFFHHNTEYTIITWHWITINSVKLTMSFKIDYFSILFLSVALFVTWSIMQFSSWYMHSDPHINRFIKYLMLFLITMLILTTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQIFLT-KS-NDLVPLSGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFHPLTSNNSTVLTAMLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGNMMKTMPFTSSCFIIGSLALTGMPFLTGFYSKDLIIESINTCNTNAWALMVTLIATS-MTAMYSMRIIYFVTMTKPRYPPLINMNENIPDLINPIKRLALGSIFAGFLISLNIPPTNIPVLTMPWYIKTTALFITILGFAIALELNNLTLKLS--MKTTSKISSFSTSLGYFPSIIHRIIPQKTLNSSYKVSSNLLDLIWLEKSIPKSTSITHAHLSK--MMTNQKGLVKLYFLS---FLITI--SLNFALYIL---------NPEWFQ- +>Microtus_fortis_calamorum_Yangtze_vole +----MNENLFSSFITPT-MMGLPIVVLIIMLPSALLTSSK-RLIPNRFHSFQLWLIKLITKQMMLIHSPKGRTWSLMLASLIMFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPLWAGAVILGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLTS-ISPPAATITFIILALLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITVLSAT-ITLFILMQLKISLYIFPQ-TPSIK-SMKHTKT-NNP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLDDMWAKTHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLIMIFMIWEAFSSKREVLYVEHTSTNLEWLHGCPPPYHTFEEPTFVKV-K--------MAYPSQLGLQDASSPIMEELMNFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYENLCFDSYMVPTSDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGVKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEVVPLKNFEDWSLSMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTTGLVMWFHYSSTTLLSLGLLGNSLTMYQWWRDVIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGISPLNPLEVPLLNTSVLLASGVTITWAHHSLMENKRSSMNQALFATIMLGAYFTILQASEYLETPFSISDGIYGSTFFMATGFHGLHVIIGSSFLIICLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTVIRKTHPLIKMINHSFIDLPAPSNISSWWNFGSLLGLCLIIQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGIYYGSYNMTETWNMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVLVHLLFLHETGSNNPTGLNSDTDKIPFHPYYTIKDFLGILILLMVFMILALFFPDILGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPILHTSKQRALTFRPITQTMYWILVADLLILTWIGGQPVEYPFIIIGQTASIAYFTIIMILMPIAGMIENNIL---DLD-------MY--------FTNILMLLVPVLIAMAFLTLIERKILGYMQLRKGPNIVGPYGILQPFADAMKLFIKEPLRPLATSTTLFVLAPALSLSLALSLWIPLPMPHPLVNLNLGILFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSFSIQSLIYTQEPLWLLIPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIILMNALSTIVFMNPFHDLNNPELFTTNFMIKTLMLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISIPIFMASI-P-PYT--MNP-TTLTIIYFTIMTGPIITMLSSNLFLMWIGLEMNLLALIPLMNNSPNPR-STEAATKYFLTQATASMILLFSILMNFKQLGLW--TFQPETDSTIMAATFISLAIKLGLAPFHSWLPEVTQGIKLNVGLILLTWQKIAPLSILFQFYTLVNPALLILS-AITSVLIGAWNGLNQTQTRKILAYSSIAHMGWMVSILPYNPSLTILNLLIYIAMTVPMFFVFHMHSFTSITSM---SLMWNKMPMALPMISLILLSTGGLPPLTGFLPKWIIITELMKNNNLSLATLMAMTALINLFFYTRLIFSTSLTTFPSNNNSKMYT-HQNYKKNNNIL-------PPMMIASTLMLPLSPLLL------MN-LMLILLTNITLTIALISVAFWLPHLNMYTEKANPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQFPNTNMLLTMAFILITILALGLAYEWTQKG--LEWTE-MSHAVFNITLAFTFSFLGALMFRSHLMSTLLCLEGMMLSLFILATITPLSTHSMVMFPIPIAILVFAACEAAVGLALLAMISNIYGSDFVQNLNLLQCMLKIILPSLMLIPLTWLSDNKKVWVNVTTYSLMINLISI-SLLWQNNEIYPSFS-TLFSADLLSAPLLVLTTWLLPLTLLASQNHIKKEPEHSKKLYISLLISLQILLVMSFSANELIMFYILFEATLVPTLIVITRWGNQTERLNAGIYFLFYTLVGSIPLLIALIFIQTSTGTLNFILMTLSSSPIN-QTW-----SNNILWLACIMAFMVKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRVSTLLDP-VTKYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAIMIQTPWSFMGAMTLMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMVFPLMATWWIMASLANLALPPTINLVGELVITISTFSWSSPSIILLGTNILITSIYSIYMIITTQRGKLTNHMNNLQPSHTRESTLMTLHILPLVLLTANPKLIMGPAP------MNAITTS-ILLIFTFLLLPMVIS---LTNMTKH-MNFPNYVTSC-IKCAFFISLIPLSSFFNSGTEFIVTDWQWLSIGPVKLWLSLKFDFFSTIFMPVALYVSWSIMEYSVWYMHSDPNLNRFIKYLLMFLITMIILTTANNLLQLFIGWEGVGIMSFLLISWWHGRADANTAALQAILYNRVGDIGFILAMTWYCLKTSSMEFQQIFLM-DN-SNTLPLAGLLLAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTSNNSTILTAMLCLGAMTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGLNQPHLAFLHICTHAFFKAMLFLCAGSIIHSLNDEQDIRKMGGVAKSMPLTSSCLTIGSLALTGMPFLTGFYSKDLIIEAANTCHTNAWALLMTLMATS-MTAVYSTRIIYFVLMTKPRFPPTITINENNPLMVNPIKRLALGSILAGFFISYNIPPTTVQVMTMPWYLKMMALAVTIMGFMIALDLNITTNNLK--PSESTLKNYFSTHLGYFPTIMHRLLPLKSLNTSFKTALTMLDLVWLEKAIPKVTSTIHTLTSS--AMSTQKGMLKLYFLS---FLITL--ICIPVVLLI---------------- +>Hemitragus_jemlahicus_Himalayan_tahr +----MNENLFASFITPM-MMGLPLVTLIILFPSLLFPTSN-RLINNRLISLQQWTLQLVSKQMMNIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTLLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTS-INTTTALITFTILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTTILSMF-LALFITFQLKISKHNFHH-NPELT--VKMPKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTVLPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEVTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLTMWFHFNSTALLALGLMTNMLTMFQWWRDVIRESTFQGHHTPAVQKGLRYGMILFITSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHIGRGLYYGSYTFLETWNIGVILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGAMLLILVLMLLVLFMPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILTLVPFLHTSKQRSMMFRPISQCMFWILAADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVMMPAASTIENNLL---KW--------MF--------MINILTLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTVNFIIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILTTVMLGTTIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAITINLMFSGQW--TVTKLFHPMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTL-SVLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILPYNPTMTMLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKTPIMTTLVLITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLSYSTALTMFPSTNNMKMKW-QFSTTKRMTLL-------PTMTVLSTMLLPLTPILSILE---MN-LMITLLTNFTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLISLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMTAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLVILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNSMIWINSTLHSLLISLTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESPTRKKLFISMLALLQLFLIMTFTATELIFFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIHIQNTVGSLNFLVLQYWAQPMP-NSW-----SNVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITLLLNP-TTDYMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLIMTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSL-ALTTLILLTTPIMMT---SLNIHKS-INYPLYVKTV-VSYAFITSMIPMTMFIHTGQEMVISNWHWLSIQTLKLSLSFKMDYFSVMFVPVALFITWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGVMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILTMAWFLVNLNTWDLQQIFMLKPE-NSNLPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFALSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLININENNPFLTNSIKRLLIGSLFAGFIISNNIPPMTIPQMTMPYYLKITALAVTILGFILALEITNMTHHLK--FNYSSNMFKFSNLLGYYPTIMHRLAPYMNLTMSQKSASSLLDLIWLEAILPKTISLAQMKMAI--TTTNQKGLIKLYFLS---FLITI--LVSMILF----------NFHE---- +>Apodemus_chejuensis_Jeju_striped_field_mouse +----MNENLFASFITPS-VMGLPIVITIIMFPSILFPSSE-RLISNRLHSFQHWLIKLIIKQMMLIHTPKGRTWTLMIVSLIMFISSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVLLGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISSM-ATLFILFQLKISSQSFPT-PPSPK-TFTAQET-KTP-W-ESKWTKIYLPLLS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGKPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVPSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLDDMWAKTHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLLMIFMIWEAFASKREVLTVSYSSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISTLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTTDLKPGDLRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYSSTILLSLGLLANTLTMYQWWRDIIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITILLGLYFTMLQASEYFETPFSISDGIYGSTFFMATGFHGLHVIIGTTFLVVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLFKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGMYYGSYAFMETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGIFIMIMFLMVLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALLPLLHTSKQRSLMFRPITQMLYWILVANLLVLTWIGGQPVEYPFVIIGQLASISYFSIILIFMPISGIIENNML---KWNL------MY--------FINILMLLVPILIAMAFLTLVERKILGYMQLRKGPNVVGPYGVLQPFADAMKLFIKEPMRPLTTSISLFIIAPTLSLTLALSLWIPLPMPHPLINLNLGVLFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQMLIYTQEHMWLILPAWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTSIVFLGPIHMINYPELYSINFMTETLLLSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCTWHISLPIFMASI-P-PYI--MNP-ITIIIIYFTILIGPVITMSSSNLLLMWVGLELSLLAIIPLLINKKNPR-STEAATKYFITQATASMIILLAIILNFKQLGLW--TFQQQTNSLLLNITLIALSMKLGLAPFHFWLPEVTQGIPLHMGLILLTWQKIAPLSILFQFYQLLNPTIIMIL-AISSILIGAWGGLNQTQMRKIVAYSSIAHMGWMLAILPYNPTMTLLNLLIYIILTVPMFLMLMLNASTTINSI---SLLWNKAPTTLVLTPLILLSLGGLPPLTGFLPKWAIITELLKNNCLIITTMMAIMALLNLFFYTRLIYSTSLTMFPTNNNSKMLT-HHLNYKNNIIL-------PSLTIISTLILPLSPQLII-----MN-LMIIMFINTILSLILISVAFWLPQMNLYTEKANPYECGFDPSSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTTNTNVMMISALILVTILSLGLTYEWTQKG--LEWTE-MSSAFINLTLAFMLSLLGTLTFRSHLMSTLLCLEGMMLSLFIMTSLASLNSNSMASMPIPITILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLTWLSKPKKTWMNVTSYSFMISLISL-SILWQTDGSPLNFS-TMFSSDPLSSPLIILTTWLLPLMLMASQNHLKKENFTYQKLYISMLVSLQILLVMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALIFIQNSMGTLNFTMLSLTTNPLN-PLW-----SNNILWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGSYGMMRIAIILDP-LTKYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSFMGATMLMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMATCWLVASLANLALPPSINLMGELFITMSLFSWSNFSIILMGVNIIITGMYSMYMIITTQRGKLTSHMNNLQPSHTRELTLMILHIIPLVLLTINPKLITGLTM------MNIITSF-IMAIFLILMSPILIS---STSLFKH-INFPMYATLS-IKLSFFLSLLPLMMLFYHNTEYMITTWHWITINSIELTMSFKMDYFSTMFLSVALFVTWSIMQFSSWYMHSDPHINRFIKYLLLFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWFGRADANTAALQAILYNRIGDIGFILAMTWFCLNMNSWELQQILLT-NN-NNLIPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALQHSSTMVVAGIFLLVRFHPMTSNNPSILTMMLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGNMMKTMPFTSSCLTIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALLITLIATS-MTAIYSMRIIYFVVMTKPRFPPLISINENNPDLTNPIKRLAFGSILAGFFITYNIPPTNIQVLTMPWYLKTTALLISILGFLLALELNNLTLNLS--MSKKNSYSSFSTSLGYFPSIIHRIIPNKTLNLSFKTSLNLLDLYWLEKSIPKSTSTMHSYMSK--LLTNQKGLVKLYFMS---FLLSI--LLTTTLFII---------NLEWFQ- +>Ozotoceros_bezoarticus_pampas_deer +----MNENLFASFITPM-ILGLPLATFIVIFPSLLFPTSN-RLVNNRLISLQQWALQLVSKQMMGTHNTKGQTWTLMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMN-ISNTMALITFIILVLLTVLEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFMMITSMF-LTLFIIFQLKVSKHNFFF-NPESM-SIKTQKQ-NTP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMNAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLMIGLTTNFLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITISLGIYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYSSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGALFLILFLMLLVMFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEHPFIMIGQLASILYFLIILVLMPVISTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLMMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHSPIMPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-IIFIIILSTMMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMMKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALTMKLGMAPFHFWVPEVTQGIPLLSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFMLFMTNSTTTTLSL---SHTWNKMPVMTVLILMTLLSMGGLPPLSGFMPKWMIIQEMTKNNSLILPTFMAITALLNLYFYMRLTYSTALTMFPSVNNMKMKW-QFSTTKKMILL-------PTMTVLSTMLLPLTPILSVLE---MN-LVLAILTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWACQTNNLNTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNLHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWLSKGNMIWINSTTYSLLISLTSL-LLMNQFNDNSLNFS-LMFFSDSLSAPLLILTMWLLPLMLMASQYHLSKENLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGIYFLFYTLVGSLPLLVALIYLQNITGSLNFLILQYWVQPLP-NSW-----SNVFMWMACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMFLNP-LTEFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFIVMATFSWSNMTIILMGLNMVITALYSLYMLITTQRGKYTYHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGSLY------MNLFSTF-TLITLLLLTIPIMTT---SSNNYKS-YNYPLHVKTT-IMYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLINLNAWDFQQIFMLNTN-NSNMPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIETINTSYTNAWALLITLIATS-FTAIYSTRIIFFTLLGQPRFPTLVTINENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTIPQMTMPNYLKMMALAVTVLGFILALEISSMTQNLK--FNYPSNAFKFSNMLGYFPMIMHRLTPYMNLTMSQKSASSLLDLIWLENVLPKTISLMQMKMST--TVTNQKGLIKLYFLS---FLITI--IISIILL----------NFHE---- +>Nasalis_larvatus_proboscis_monkey +----MNENLFTPFTTPT-LLELPVVVPIILFPTLLLPTSK-YLINNRLITIQQKLVQLILKQMMVIHNTKGQTWSLMLMSLIIFIASTNFLGLLPYSFTATTQLSMNLAMAIPLWAGTVITGLRFKTKSSLAHFLPQGTPTPLIPALVIIETISLFIQPMALAVRLTANITAGHLLMHLIGSATLALLT-ISLLATSLTLVLLVMLTILEMAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFITIMAML-PALYLIMQLKLLNTTYHF-SPSQK-VLSMQTT-NNS-W-QLKWTKIYLP-HS-QPQHS---MLINRWLFSTNHKDIGTLYLLFGAWAGTAGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNFSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQVCAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSMGSFISLVAMLLMIYMIWEAFASKRKVMLIEQPTSNLEWLHGSPPPYHTFDEPAFIKV-K--------MPHPVQLGLQDATSPIMEELIAFHDHAFMIVSLISFLVLYVLSSVLTTKLTNTNITDAQEMETIWTILPAIILILIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAIPGRLNQTAFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQAHPYHMVKPSPWPLTGALSALLMTSGLIMWFHFYSTTLLMLGLLTNMLTMYQWWRDIIRESTYQGHHTMPVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPHLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKEMIQALLTTILLGIYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTVCLTRQLFYHFTSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTPTRKSNLIMKMINHSLIDLPTPSNISMWWNFGSLLATCLILQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGVTLLLMIMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNIVQWVWGGYSIDSPTLTRFFTFHFTLPFIIAALTTLHLLFLHETGSNNPCGIPSNPDKIPFHPYYTIKDILGLILLLLILMVLVLFLPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLMSILILMIIPMLHKSKQQSMMFRPLSQLVLWFLITILLTLTWIGSQPVNQPFIMIGQTASMMYFITILILMPLASSIENNLL---K---------MF--------TMNLLLTILPVIAAMAFLTLTERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTTLYIIAPALAFSIALLLWMPLPMPNSLINLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIIVLSVLLMSGSFNLYTLITTQEHLWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIILMNALTVTIFLGTLYPTHSPELFTTCFITKTLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLALLMWYISTPIMTSGI-P-PQN--MNP-LAQLIIYSTMIMGTLITSLSSHWFLAWAGLEMNMLAFTSILIKKANSR-STEAATKYFLTQSTASMILMMAIMYNNLYPGQW--TLLSNPDQLSALIMTVALAMKLGMAPFHFWIPEVTQGTSLTSGLLLLTWQKLAPMSIMYQMYPSINMTILMTL-STLSIMAGSWGGLNQTQLRKILAYSSITHMGWMMMTLTYNPNITTFYLLTYIIMTSTAFLALNLNSNTTTLML---SRTWNKLTWLMPLTASTLLSMGGLPPLTGFLPKWITIQELTKNNNFIMPSIMIVMALINLYFYLRLIYIISMTLLPTTNNTKMKW-QFENTKPTPFI-------PSLIILTTLLLPVSPTTLMTF---MN-LVLALTINTFLTLLLMTIMFWLPQLNSYTEKANPYECGFDPLNSARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPMMIKSSIMLIIILTLSLAYEWTQKG--LDWTE-MPIIYTNIVLAFMISLLGMLIYRSHLMSSLLCLEGMMLSLFMMSTLMALNMHFPLANIVPIALLVFAACEAAVGLALLISISNTYGLDHIHNLNLLQCMLKMIIPTMMLLPTTWFSKNNLIWINLTTHSLIISLIPL-LFFNQINNNLTSHS-THLSSDPLTTPLLTLTAWLLPLMIMASQYHMYNESPLRKKLYLSMMIFLQISLIMTFMATELILFYILFETTLIPTLIIITRWGNQAERLNASTYFLFYTLAGSLPLLIMLMFTHNNLGSLNIPLLTLMTQNMT-TTW-----SHNLIWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIMASLIQTPWSFTGAIILMIAHGLTSSMLFCLANSNYERTHSRIMMLSRGLQTLLPLMAFWWFVANLTNLALPPTINLIGELLVVVTSFSWSYITIALTGLNMLITALYSIYMFITTQRGALTSHIISMKPSFTRENMLMFMHISPIILLSLNPSIIMGFTP------MMMYTST-VMLTLTSLTFPIIIA---LTKPNKN-HLYPNYVKTI-MMFTFIISLLPTTLYIFLDQDTIISNWHWMTIQSLEITLSLKLDYFSMMFTPIALFITWCIMEFSLWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAALQAILYNRIGDIGFILAMAWFILHYNSWDFQQMFTLNSS-PDMLPLVGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNMLIQSLTLCLGAITTVFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKMMPLTSTSLTIGSLALAGMPFLTGFYSKDLIIETASTSYTNAWALSITLIATS-LTSAYSTRTIILTLTGRPRFSTSTCINENNLALLNPMKRLTMGSLLAGFLIINNILPTTLPQSTMPYYLKLLALCVTALGFLMALDLALMTNNLK--TKTSSHMFKFSNMLGYFPITIHRMIPYQNLIMSQNLAFLLLDLIWLEKSMPKTISHTHIITAI--TTTTQKGMIKLYFLS---FLIPL--ALISLLMM----------------- +>Mus_fragilicauda_ +----MNENLFASFITPT-MMGLPIVVAIIMFPSILFPSSK-RLINNRLHSFQHWLIKLIIKQMMLIHTPKGRTWALMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVITGFRYKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISSM-ITLFILFQLKISSQTFPL-PPSPK-SLTTLKV-KTP-W-ESKWTKIYLP-HS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDTWAKAHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYSTWNTVSSMGSFISLTAVLVMIFMIWEAFASKREVASVSYASTNLEWLHGCPPPYHTFEEPTYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSITLLTIGLLTNVLTMYQWWRDVIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGILPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITIMLGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSSFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNMRKTHPLFKIINHSFIDLPAPSNISSWWNFGSLLGVCLMIQIITGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGMYYGSYTFLETWNIGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAAMVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILIMFLFLMTLVLFFPDMLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSLMFRPITQTLYWILVANLLILTWIGGQPVEHPFIIIGQMASISYFLIILVLMPISGIIEDKLL---KLYS------MY--------FINILTLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIVAPTLSLTLALSLWVPLPMPHPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSYSLQMLITTQEHMWLLVPAWPMAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTTIIFLGPLYYINLPELYSTNFMAEALMLSSAFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCTWHISLPIFLAGT-P-PYM--MNP-ITLTIIYSTIFLGPIITMSSTNLMLMWVGLEFSLLAIVPLLINKKNPR-STEAATKYFVTQATASMIILLAIVLNYKQLGTW--MFQQQTNNLILNMTLMALSMKLGLAPFHFWLPEVTQGISLHTGLILLTWQKIAPLSMLIQIYPLLNSSIILIL-AITSIFMGAWGGLNQTQMRKIMAYSSIAHMGWMLAILPYNPSLTLLNLTIYIILTIPMFMALTLNNSTTINSI---SLLWNKTPAVLTMTSLILLSLGGLPPLTGFLPKWAIISELMKNNCLIMATLMAMMALLNLFFYTRLIYSTSLTTFPTNNNSKMTI-HQTKIKPNLMF-------STLAIMSTMTLPLSPQMIM-----MN-LHIAIIINTLLSLALILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTIKTTIMMTMAFILVTILSLGLAYEWTQKG--LEWTE-MTSAFFNLTLAFTLSLLGTLMFRSHLMSTLLCLEGMMLSLFIMTSITSLNSNSMSSMPIPIIILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLIWLSNPKKTWTNVTSYSFLISLISL-TLLWQTDESHKNFS-NMFFSDPLSTPLIILTTWLLPLMLMASQNHLKKENPTLQKLYISMLVSLQILLTMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLVGSIPLLIALILIQNYMGSLNFTILSLTTHTMD-TSW-----SNNLLWLACMMAFLIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGSYGMMRISIILDP-LTKYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSFMGATMLMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQTMFPLMATWWLMASLANLALPPSINLMGELYITISLFSWSNFSILLTGINIIITGMYSMYMIITTQRGKLTNHMINLQPSHTRESTLMTLHMIPIILLTINPKLITGLTM------MNIFTTS-TLLIFILLLSPILIS---MSNLIKY-INFPLYTTMS-IKFSFIISLIPLLMFFYNNMEYMITTWHWITMNSMKLTMSFKLDFFSILFTSVALFVTWSIMQFSSWYMHSDPNINRFIKYLTLFLITMLILTSANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMIWFSLNMNSWELQQIMFSNNN-NNLIPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPLTANNNNILTIMLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGMNQPYLAFLHICTHAFFKAMLFMCSGSIIHSLGDEQDIRKMGNITKTMPFTSSCLIIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALLITLIATS-MTAMYSMRIIYFVTMTKPRFPPLISINENDPDLMNPIKRLALGSIFAGFIISYNIPPTNIQILTMPLFLKTTALIISVLGFLIALELNNLTMKFS--MNKTNLHSSFSTLLGYFPSIVHRITPMKSLNLSLKTSLTLLDLIWLEKTIPKSTSMLHTNMTT--LTTNQKGLIKLYFMS---FLINI--ILIIILYII---------NPE---- +>Bos_grunniens_domestic_yak +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLVNNRFVTLQQWMLQLVSKQMMSIHNPKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISATTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKISKHNFYY-NPELT-STKMLKQ-NTP-W-ETKWTKIYLP-LL-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKAMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTALLMIGLTTNMLTMYQWWRDIIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG---MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGVCLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITAIAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILALMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILALIPLLHTSKQRSMIFRPLSQCLFWTLVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPTAGTIENKLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSTSMFILAPILALGLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLIITQEQTWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNMFTAILFLGTSHNPHMPELYTINFIIKSLLLTMLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILTSGI-P-PQT--MNP-IIFTTILLTIMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKNHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNLILTL-SILSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYITMTSTMFTMFMANSTTTTLSL---SHTWNKTPIMTILILATLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPLMKKMTFL-------PTMVVLSTMTLPLTPMLSVLE---MN-LMLALLTNFTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIILLAVSLAYEWTQKG--LEWTE-MSMVHMNIMMAFAVSLVGLLMYRSHLMSSLLCLEGMMLSLFVMAALTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWMSKGNMIWINSTTHSLLISFTSL-LLMNQFGDNSLNFS-LMFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNMVGSLNFLMLQYWVQPMH-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLILNP-MTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVMMSTFSWSNITIILMGMNMVITALYSLYMLIMTQRGKYTYHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-SLVTLLLLTVPIMTT---SLNTYKS-SNYPLYVKTT-ISYAFITSMIPTMMFIYSGQELVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLDPN-NSNTPLIGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKHIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSMIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGVPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFSTLININENNPLLINSIKRLLIGSLFAGYIISNNIPPTTVPQMTMPYYLKTTALIVTILGFTLALEISNMTKNLK--FHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKAST--LVTNQKGLIKLYFLS---FLITI--LISMILF----------NFHE---- +>Equus_caballus_horse +----MNENLFASFATPT-MVGLPIVILIIMFPSILFPSPN-RLINNRLISIQQWLVQLTSKQMMAIHNSKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVFMGFRHKTKAALAHFLPQGTPIFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLALMS-ISPSTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFINIVSMI-LTLFIVFQLKISKHSYPT-HPEVK-TTKMTKH-SAP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLALPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMIWEAFASKREVSTVELTSTNLEWLHGCPPPYHTFEEPTYVNL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISSMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLVASRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEEWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTLLLAMGLLTNILTMYQWWRDIIRESTFQGHHTSIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMLQGLFITISLGVYFTLLQASEYYEASFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVVVHLLFLHETGSNNPSGIPSDMDKIPFHPYYTIKDILGLLLLILLLLTLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALIPTLHMSKQRSMMFRPLSQCVFWLLVADLLTLTWIGGQPVEHPYVIIGQLASILYFSLILIFMPLASTIENNLL---KW--------MF--------MINVLLLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADALKLFIKEPLQPLTSSTSMFIIAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLIITQEYLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNIFTTTLFLGAFHNPYLPELYSINFTIKALLLTCSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMLSSI-P-PQT--MNP-LIFTTILMTVLLGTMIVMMSSHWLMIWIGFEMNLLAIIPILMKKYNPR-TMEASTKYFLTQATASMLLMMAIIINLMHSGQW--TITKVFNPTASIIMTSALAMKLGLTPFHFWVPEVTQGISLTSGLILLTWQKLAPMSILYQISPSINLNILLTM-AVLSILVGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLVYNPTLTMLNMLIYIMMTLTMFMLFIHSSSTTTLSL---SHTWNKMPLTTTLILITLLSMGGLPPLSGFMPKWMIIQELTKNSSIILPTLMAIMALLNLYFYMRLTYSTSLTMFPSTNNMKMKW-QFE-TKRITLL-------PPLIVMSSLLLPLTPMLSILD---MN-LMLTLLTNTLLASLLVLIAFWLPQLNIYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLIMALVLISLLAISLAYEWTQKG--LEWTE-MSLVHINIFLAFTVSLVGLLMYRSHLMSSLLCLEGMMLSLFVMATMMVLNTHFTLASMMPIILLVFAACERALGLSLLVMVSNTYGVDHVQNLNLLQCMLKIIIPTIMLMPLTWLSKKNMIWINTTTYSLLISLISL-SLLNQPSNNSLNFS-LMFFSDPLSAPLLVLTTWLLPLMLMASQHHLSKEPLIRKKLYITMLTMLQTFLIMTFTATELISFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALISIQNLTGSLNFLLIQYWNQALP-DSW-----SNIFLWLACMMAFMVKMPVYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTMLNP-QTSFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSNITIILMGANITITALYSLYMLITTQRGKYTHHINSIKPSFTRENALMALHMTPLLLLSLNPKIILGFTY--------MFSSL-MLVSLLVLTLPIMLS---IFNTYKN-STFPHHVKNT-ISYAFITSLIPTMMFIHSGQETIISNWHWMTMQTLKLSLSFKLDYFSMIFVPVALFVTWSIMEFSLWYMHSDPYITRFFKYLLTFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFIMAMAWFLFNTNTWDLQQIFMLDPN-LTNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQSLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFNAMPFTTTSLIIGSLALTGIPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-LTAVYSTRIIFFALLGQPRFLPLTSINENNPFLINSIKRLLIGSIFAGFFISNNIYPTTVPEMTMPTYMKLTALAVTILGFTLALELSLMTHNLK--LEHSTNVFKFSNLLGYYPTIMHRLPPLANLSMSQKSASLLLDSIWLENILPKSISQFQMKTSI--LISTQKGQIKLYFLS---FLITL--TLSMLLF----------NLHE---- +>Lophostoma_silvicolum_ +----MNENLFASFITPT-MMGLPIVTLIIMFPTMLFPSTN-RLINNRLVAIQQWLIYLTSKQMLSIHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLIVIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTATALLTFMVLILLTILEFAVALIQAYVFTLLVSLYLHDNAMPQLDTSTWFITILSTI-ITLFIIMQLKISSHQYYT-NPEPK-TTKTTKS-LTP-W-ETKWTKIYSP-LS-LPQR----MFISRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGVGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLLTGYTLNTVWAKIHFLVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMVWEAFAAKREVSVTELTTTNLEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFMISSLVLYLISSMLTTRLTHTSTMDAQEVETIWTVLPAVILITIALPSLRILYMMDEINNPSMTIKTMGHQWYWSYEYTDYSDLCFDSYMIPTSDLKSGDLRLLEVDNRVVIPMEMTVRMLISSEDVLHSWAVPSLGLKTDAVPGRLNQTTLLATRPGLYYGQCSEICGSNHSFMPIVLEMVTLNCFEKWSASMT----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSTILLTLGLLTNTLTMYQWWRDIIREGTFQGHHTPVVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLNPLDVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQALSITIALGLYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIINNSLVDLPAPSSLSSWWNFGSLLGVCLMVQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWLLRYLHANGASMFFICLYLHVGRGLYYGSYLFSETWNVGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFLLPFLVTALVMVHLLFLHETGSNNPTGIPSDPDLIPFHPYYTIKDALGFLIMLTALSTLVLFSPDLLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILVLAIIPMLHTSKQRSMMFRPLSQCLFWLLVAVLLTLTWIGGQPVEHPYIIIGQLASILYFLILLVFMPLVSMMENYLL---KW--------MY--------LITLLSTIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPHGLLQPIADAVKLFTKEPLRPLASSISMFIIAPILALTLALTMWTPLPMPHPLINMNLGVLFMLAMSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSYSLSTLITTQEYTWLILPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTTVLFLGAHNNPITPELYTINFAIKTLMLTMTFLWIRASYPRFRYDQLMHLLWKNFLPMTLALCMWHVAMPIMTAGI-P-PQT--MNP-MIFSLIMSTIILGTMIVMTSSHWLTVWMGFEMNMLAIIPMLTKTHHPR-STEAATKYFLTQATASMLLLLAIIINLLHSGQW--TITSMTNPTASIILTLSLTMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSILYTISPSINTDLLLTL-SYLSVMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILAYNPTLTLLNLTLYIMMTLTMFMLLITTATTTTSSL---SHTWNKMPLITTIMLTTLLSLGGLPPLTGFMPKWMIIQELTKNDNIILPTLMAITALLNLYFYMRLTYATSLTMFPTTNTTKIKW-HFKTTKQMICL-------PPLIIISTMILPLTPITMILN---MN-MAITLLTNTTLASLLVTIAFWLPQTSSYAEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLQTMLPMALILITLLAASLAYEWLQEG--LEWSE-MSLTYINMFLAFTISLMGLLMYRSHMMSSLLCLEGMMLSLFVMMTITILNTQLTLASMLPIILLVFAACEAALGLSLLVMVSTTYGTDYVQNLNLLQCMLKIIIPTTMLIPLIWLSKPKMIWINTTTHSLIINILWF-PLINQFIDNSLNLS-TTFFSDALSTPLLMLTMWLFSPMVITHPIHPSTETLTRKKLYLTMLVLLQVFLIMTFTVTELIMFYILFEATLLPTLIIITRWGNQAERLNAGLYFLFYTLVGSLPLLIALVHIQNITGSLNFLLMQHWLTPLP-TSW-----STSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITILLDP-LTEFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTILPLMAAWWLLASLTNLALPPTINLIGELFVVMSMFSWSNLSLILLGLNIVITALYSLYMLITTQRGNHTPHINNIPPSYTRENTLMTMHILPLLLLSINPTIILGTPY------MNLFHST-MIMSLTILTLPILMT---ILNPQNN-SKFPYHVKTM-VSYSFFISMIPTIIFIYSGQEAVISNWHWITLHTLKLSLSFKLDFFSMLFMPIALFVTWSILEFSMWYMHSDPNINRFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILSMAWFLINSNTWELQQIFLLNPS-TPPLPLAGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNAIIQTTTLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMVVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKSMPYTATAMTVGSLALTGTPFLTGFYSKDLIIEAANISYTNAWALLMTLIATT-LTAVYSTRIIFFALLGQPRLPTLILINENNPLLLNAIKRLLIGSIFAGFLISKNIPPMTAPPMTMPPYLKLTALTITLIGFILALELNLATLNLK--YKTPSHLFKFSNLLGYFPTIMHRLPPMTNLTLSQKSASSLLDLAWLEILLPKSISTIQLKTSN--LVSTQKGLIKLYFLS---FLVTF--LLTLMML----------NPHA---- +>Tursiops_aduncus_Indo-pacific_bottlenose_dolphin +----MNENLFASFMIPV-MLGIPITTLIIMFPTMLFPTPN-RLINNRMVAIQQWLTKLTSKQLMITHSPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNLGMAIPLWAGTIFIGFRNKTKMSLAHLLPLGTPTFLIPMLVMIETISLFIQPMALAVRLTANITAGHLLLHLIGSATLALMS-ISLFTALITFIILTLLIILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMI-FTLFALLQLKISKHFYSP-SPKPV-DTKLQKQ-QTP-W-NYTWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQLYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWTKIQFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFEEPVYVNL-KYS------MAYPFQLGLQDAASPVMEELLQFHDHALMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTVLPAVILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTPDLKPGELRLLEVDNRMVLPMQMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSTSML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGVIMWFHFNSMILLTLSFLTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIMLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKILNDAFIDLPTPPNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWFIRYLHANGASMFFICLYAHIGRGLYYGSYMFQETWNIGVLLLLAVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAAVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGALLLILTLLALTLFTPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLIFIPMLQTSKQRSMMFRPFSQLLFWTLIADLLTLTWIGGQPVEHPYIIVGQLASILYFLLILVLMPTAGLIENKLL---KW--------MF--------VINILTLILPVLLAVAFLTLVESKILGYMQFRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFMIAPVLALALALTMWAPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLNTTQEKLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGAFHDPYMPELCTTNLIVKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI-P-PQT--MNP-FVSITLLTTLILSTTIVTISSHWLFAWIGLEMNMMAIIPIMMKKPNPR-ATEASAKYFLTQATASSLLMLAIIINLMHSSQW--TIMKLFDPTASILMTMALAIKLGLSPFHFWVPEVTQGIPLSTGLILLTWQKLAPISILYQISPSINLHLMITM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILLYNPALTLLNLLIYIVMTFTMFMLLIQNSTTTTLLL---SQTWNTMPIMTTFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPTLMAITALLNLYFYMRLTYSTALTLFPSTNNMKMKW-QFYPTKQMTLL-------PTAIVLSTMLLPLTPAFFILL---MN-LLLTLLTNTTLALLLMLVAFWLPQLNTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEVALLLPLPWAIQTNNLTTMLLMALFLISLLAASLAYEWTQKG--LEWDK-MSLVHINILVAFTVSLTGLLMYRSHLMSALLCLEGMVLSLFILATLTILNTHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKSNFIWINTTTHSLLISFTSL-LLLNQFNDNSLNYS-LMFFSDPLSAPLLMLTMWLLPLMLMASQSHLMKEPLARKKLYITMLVLLQVLLIMTFTAMELIMFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALTYLQNTVGSLNFLLLQYWAQPLS-TSW-----SNTFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTEHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFFPLMATWWLLACLTNLALPPTINLIGELLVIMSTFSWSNLTIILMGVNIVITALYSLYMLIMTQRGKHTHHINNLTPTFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSS-TLLTLLMLMAPIMAS---STDFYKN-NKYQHYVKNM-TLFAFITSLIPMTMFIHTNQEMLISNWHWITIHTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLHNTNAWDLQQIFTLNQN-PPILPLMGITLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQTMMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALIIGCFALTGMPFLTGFYSKDLIIEAATSSYTNAWALLLTLIATS-MTAIYSTRIIFFTLLEQPRFPPLMNINENNPMLINPIKRLLIGSIFAGFILSNSMPPMNTPLVTMPLYLKLTALMVTILGFILAFEINNYSKNLK--YPYSSDSTKFSTLLGYFPTIMHRLPPHLVLTMSQKFATSLLDLTWTETILPKTTALIQLKAST--LTSNQKGLIKLYFLS---FLITM--ILSMLLF----------NYPE---- +>Myodes_glareolus_Bank_vole +----MNENLFASFVTPT-MMGLPIVILIIMLPPMLLTSSK-RLISNRFHSFQQWLIKLIIKQMMLIHSPKGRTWSLMLVSLIMFIGSTNLLGLLPHTFTPTTQLSTNLCMAIPLWAGAVILGFRHKLKASLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLTS-ISPPTATITFIILALLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITVLSTI-ITLFTLMQLKISLHIFPQ-TPSAK-SIELMKT-DNP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGTSVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLDDMWAKTHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLIMIFMIWEAFASKREVLHVEHSSTNLEWLHGCPPPYHTFEEPTFVKV-K--------MAYPSQLGLQDASSPIMEELMNFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLCFDSYMVPTSDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKNFEDWSLSMI----------MTHQTHAFHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSATLLSLGLLANTLTMYQWWRDVIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNNMNQALLITILLGVYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIICLLRQLNFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTIIRKKHPLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGMYYGSYNMIETWNMGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVFVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDFLGVLILLMGLMILVLFFPDVLGDPDNYTPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPLLHTSKQRGLTFRPITQTMYWILVADLLILTWIGGQPVEYPFIIIGQMASIAYFAIIVILMPMAGMIENNIL---DLD-------MY--------FINILTLLVPVLIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFIKEPLRPLATSTTLFIIAPTLSLSLALSLWIPLPMPHPLVNLNLGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSFSIQTLIYTQEPMWLLIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIILMNALSTIVFLGPFHDLYDPELYTTNFMLKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISIPIFMASI-P-PYT--MNP-ITLLIIYFTILMGPMITMFGSNLFTMWIGLEMNLLALIPLMMSNSNPR-STEAATKYFLTQATASMILLMSIIMNFKQLGLW--TFQPETSSFIMTMSFISLAIKLGLAPFHSWLPEVTQGIELKVGLVLLTWQKIAPLSILSQFYELMDSKMLISS-AIASVLIGAWNGLNQTQVRKIMAYSSIAHMGWMISILPYNPSLTTLNLLIYIIMTIPMFLVFHAHSFTSITSM---SLMWNKMPMAIPMISLILLSTGGLPPLTGFLPKWAIITELLKNNNLILATLMAMTALINLFFYTRLIYSTSLTTFPTNNNSNMYI-QHTHTKTNNIL-------PPLMILSTMLLPLSPLLL------MN-MMLVLLINITLSMILISVAFWLPHLNSYTEKANPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQFPNMSPPTIMAFILITILAAGLAYEWTQKG--LEWTE-MTPAVVNITLAFTFSFLGTLMFRSHLMSTLLCLEGMMLSLFILATITPLNTHSMIMFPIPIVILVFAACEAAVGLALLAKISNTYGSDFVQNLNLLQCMLKIIFPSLMLLPLTWLSSNKKVWINVTTYSLLINLISI-SLLWQNNESSLNFS-TTFSADPLSAPLLVLTTWLLPLMLLASQNHIKKEHEHNKKLYISLLVTLQILLIMTFSANELIMFYVLFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALIFIQNSTGTLNFILMSLNYTPMN-HTW-----ANNILWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRISMILDP-MTKSMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAIMIQTPWSFMGATALMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMVFPLMATWWIMASLANLALPPTINLIGELMITVSLFSWSNPSIILLGTNILITSLYSIYMIVTTQRGKLVSHMNNLQPSHTRESTLMALHILPLILLTINPKLILGFTT------MNTITSS-ILLIFMLLMFPMIIS---FTNLTKQ-INFPNYVTSC-IKYAFFISLIPLFSFFNYNTEVMITNWHWMTIGSMKLSLSLKFDFFSIIFLPVALFVTWSIMEFSMWYMHSDPNLDRFIKYLLLFLITMVILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRSDANTAALQAILYNRIGDIGFILAMAWFCTKVNSWDLQQIFIT-NE-PNIIPLSGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLISNNNTILTIMLCLGAVTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLAKAMPFTSSCLTIGSLALTGTPFLTGFYSKDLIIEAANTCYTNAWALLITLVATS-MTAIYSMRIIYFVLMTKPRFPSTIIMNEDNPLLINPIKRLALGSIMAGFFISYNIPPTTIQVMTMPWYLKTTALMVTITGFVIALDLNNLTNNLT--PTKPSPTSSFSTSLGYFPTIMHRLLPSKSLNTSFNTALTLLDLTWLEKAIPKMMSAMHMITSS--TLSNQKGMIKLYFLS---FLITL--LSIPIVLMT---------------- +>Lemur_catta_Ring-tailed_lemur +----MNENLFASFITPT-IVGIPIVILIIMTPYIIFPSPT-RLINNRLTSLQQWLVQLILKQLMSIHNTKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAATVIKGFRHKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTS-ISPATASITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITILSMI-LTLLIVFQLKISKFNYPL-NPTMK-NINKDLY-TNP-W-ETKWTKIYLP-LS-LPQQS---MFINRWFYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGSLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSIGSFISLTAVMLMIFMIWEAFASKREVLMVELTPTNLEWLHGCPPPYHTFEEPAYVKV----------MAYPVQLGFQDAASPIMEELLYFHDHTLMIMFLISSLVLYIISLMLTTELMHTNTMDAQEVETVWTILPAAILILIALPSLRILYMMDEITTPSLTLKTMGHQWYWSYEYTDYEDLCFDSYMTPSSDLKPGELRLLEVDNRVVLPTELAVRMLISSEDVLHSWTVPSLGVKTDAIPGRLNQATLMASRPGVYYGQCSEICGANHSFMPIVLELVPLKHFEEWLLSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSSMLLSLGMLTNLLTMYQWWRDIVREGTFQGHHTSIVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGNRVQMLQALLITITLGLYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFFRQLSFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKNHPLMKIMNSSFIDLPTPSNISSWWNFGSLLGACLALQIITGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFLCLFIHIGRGLYYGSFTLSETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMVHLLFLHETGSNNPLGTSSDSDKIPFHPYYTIKDLLGLMLLILLTMTLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILAIIPMLHTAKQRSMVFRPLSQYLFWILTADLFILTWIGGQPVEHPFITIGQMASILYFSLILIMMPVVSLIENKML---KW--------MF--------MINLFLLIIPILLAMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVTWIPLPLPYPLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEFTLAIILLSLLLMNGSFTLSTLITTQEYLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHMPETYTTSFAIKTLLLTILFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLASCI-P-PQA--MKP-IILMFIMLTIFMGTMLTMISSHWLLMWVGLEINMLAIIPILMKKISPR-STEAATKYFLTQATASMLLMFSIVINTANSGQW--GITNMHNQLTSLVTMAALMMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQIFPSMNPNIILLI-AILSILVGGWGGLNQTQLRKILAYSSIAHMGWMMAILMYWPSLTMLNLLIYLMLTITLFSVLNINTNTTTLTL---SNTWNKTPMITLTILISLLSLGGLPPLTGFLPKWTIIQELTKNSNIMLATIMAIMALLNLYFYMRLIYSTSLTMFPTLNNMKMKW-QFQQTKQIFLL-------SPLVILATLTLPLSPALLTLN---MN-LPLALTTSITLTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLKLMLTVALVLITILAAGLAYEWLQKG--LEWVE-MPSISTNIILAFITALLGMLIFRSHLMSSLLCLEGMMLSMFILSTLTILSLHFTTSFMMPILLLVFAACEAAVGLALLVTVSNTYGLDYIQNLNLLQCMLKIIIPTIMLFPVTWCSSSPMIWINTTLHSLLISLAGL-LFLNQFNDSNNNFS-LTFFSDSLSSPLVVLTMWLLPLMIMASQHHLKKEPWTLKKLYISMLIFLQMFLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHIQNYLGSLNMLTMSFCFQELS-NSW-----SSNLLWMACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLPPVLLKLGGYGMMRITMILNP-MTKYMAYPFLMLCLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATILMIAHGLTSSMLFCLANSNYERIHSRTMLLARGIQTILPLMATWWLLASLTNLALPPSINLIGELFVTMASFSWSNITIILMGLNMLITALYSLYMLTTTQRGKLTYHSHNLNPSFTRENTLMSMHMLPLLLFTLNPKIILGPTY------MNLLSSF-TLVTLIILTLPIIMN---VTNMYKN-YPYAPYVKSS-IACAFITSLIPTMLFISSGQETIISNWHWMTIQTLKLSISFKLDYFSMLFMPVALFVTWSIMEFSMWYMHSDPNMNQFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLMYSNTWEFQQMFMLNYH-PDMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNKTIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTMGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTSSSLMIGSLALTGMPFLTGFYSKDLIIESVNTSNTNAWALTITLIATS-MTAIYSIRIIFYALLGQPRFTTSTPINENNPLLINSIKRLALGSILAGFFLTNNILPMNVPQMTMPLYLKLTALMVTITGFALAMELNLMTNNLK--FKLPSDIYKFSNSLGFYPMTMHRLIPSHNLIMSQNTASLLLDLIWMEKTMPKNLSQLQMTSST--AISNQMGLVKFYFLS---FLMSL--LFTLLLII----------------- +>Homo_sapiens_ssp__Denisova_Denisova_hominin +----MNENLFTSFIAPT-ILGLPAAVLIILFPPLLIPTSK-YLINNRLITTQQWLIQLTSKQMMAMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTANITAGHLLMHLIGSATLAMST-ISLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTTVWPTMIIPML-LTLFLITQLKMLNTNYHL-PPSPK-PMKMKNY-NKP-W-EPKWTKICSL-HS-LPPQS---MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGSLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSAGSFISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS----------MAHAAQVGLQDATSPIMEELIIFHDHTLMIIFLICFLVLYALFLTLTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPVEAPIRMMITSQDVLHSWAVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPVFTL----------MTHQSHAYHMVKPSPWPLTGALSALLMTSGLTMWFHFHSTTLLMLGLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQLMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTPTRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQITTGLFLAMHYSPDASTAFSSIAHIARDVNYGWIIRYLHANGASMFFICLFLHIGRGLYYGSFLYSETWNIGIILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHPYYTIKDALGLFLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTILRSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGGQPVSYPFTIIGQVASVLYFTTILILMPTISLIENKML---KWA-------MP--------MANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSMLLMSGSFNLSTLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFALFFMAEYTNIIMMNTLTTTIFLGTTYNALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFRYDQLMHLLWKNFLPLTLALLMWYVSMPITISSI-P-PQT--MNP-LAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLTKKMNPR-STEAAIKYFLTQTTASMILLMAILFNNMLSGQW--TMTNTTNQYSSLMIMMAMAMKLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTL-SILSIVTGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLNSSTTTLLL---SRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTIMATITLLNLYFYLRLIYSTSITLLPMSNNVKMKW-QFEHTKPTPFL-------PTLIALTTLLLPISPFMLMIL---MN-FALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMSPARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVTSSLLLIIILALSLAYEWLQKG--LDWAE-MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMATLMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLSLLQCMLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPL-LFFNQINNNLFSCS-PTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSNEPLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLTLTAQELS-NSW-----ANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNP-LTKHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFSS------MTMYTTM-TTLTLTSLIPPILTT---LINPNKK-NSYPHYVKSI-VASTFIISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFSLWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARADANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNAN-PSLTPLLGLLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLGAITTLFAAVCALTQNDIKKIVAFSTSSQLG--LMVVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIEAANMSYTNAWALSITLIATS-LTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLAAGSLFAGFLITNNISPASPFQTTIPLYLKLTALAVTLLGLLTALDLNYLTNKLK--MKPPLYTFYFSNMLGFYPNITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISASI--ITSTQKGMIKLYFLS---FFFPL--ILTLLLIT----------------- +>Mesoplodon_europaeus_Gervais_beaked_whale +----MNENLFASFTVPV-MLGIPIVTLIIVFPTILFPTPN-RLVTNRTISLQQWLTKLTSKQLMNTHNPKGQTWSLMLISLLLFIASTNLLGMLPHSFTPTTQLSMNIGMAIPLWAGTVITGFRNKTKATLAHLLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGKTTLVLMS-INPSVAFITFTILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLLVILSML-LALFTLFQLKISKHFYYP-NPK-T-TTKLQKQ-QTP-W-NITWTKIYLP-LS-QSQ-----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGSPDMAFPRMNNMSFWLLPPSFLLLMASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGASSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNSTWAKIHFVIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTSTNLEWLNGCPPPYHTFEEPAFVNP-KWS------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTPDLKPGDLRLLEVDNRMVLPMEMTIRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSTSML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSILLLILGLLTIILTISQWWRDVIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIMLGIYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCLLRQMKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKVINNAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYAHIGRGLYYGSYIFQETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIILALTIVHLLFLHETGSNNPTGIPSDMDKIPFHPYYTIKDILGALLLILALLTLTLFAPDLLGDPDNYTPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILLFIPLLHTSKQRSMMFRPFSQFLFWLLIADFLTLTWIGGQPVEHPYMIVGQLASILYFLLILVLMPIASLIENKLL---KW--------MF--------MINILMLMLPILLAVAFLTLVERKILGYMQLRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPILALTLALTMWCPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLTMTQEQLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGAFHDPYTPELYTTNIILKTLLLTMLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMTAGI-P-PQTY-MNP-LTFTIILTTLILGTTIVMTSSHWLFAWIGFEMNMMAMIPIMMKNPNPR-ATEASTKYFLTQATASTLLMMAVIINSMYSGQW--TITNLFNPTASMLMTMALAIKLGLSPFHFWVPEVTQGIPLTTGLVLLTWQKLAPLSILYQISPSINLSLMLTM-SLLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILLYNPTLTLLNLLIYITMTFTMFMLLIQNSTTTTLSL---SQTWNKMPITTTLMMLTLLSMGGLPPLSGFMPKWMIIQELTKNDTLIMPTLMAIMALLNLYFYMRLTYSTALTLFPSMNNMKMKW-QFYSTKRMMFL-------PTAIVMSTMLLPLTPMISTLL---MN-LLLTLTTNMALALLLVIIAFWLPQLNTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLNMMLTMALFLISLLAASLTYEWTQKG--LEWAE-MSLVHMNIIMAFTLSLVGLLMYRSHLMSALLCMEGMMLSLFILATLMILNSHFTLASMMPIILLVFAACEAAIGLALLVMISNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKSNHIWINSTTHSLLISLTSL-LLLNQFNDNSLNYS-LTFFSDSLSTPLLMLTMWLLPLMLMASQYHLLKEPLTRKKLYITMLIMLQALLIMTFTATELILFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALTYLQNTTGTLNFLLLQYWTQPLS-PTW-----SNTLMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITPLLDP-LTKHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYTGAITLMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFLPLMATWWLLASLTNLALPPTINLIGELLVVMSTFSWSNLTIILMGTNIVITALYSLYMLTMTQRGKHTHHINNLTPSFTREHALMALHIMPLLLLSLNPKIIMGLLY------MNLFTSF-TLLMLLILMTPILMS---GTNFYKS-NKYQQYVKNT-TLCAFTISLIPMMVHLHTNQETLISNWHWITIQTLKLTLSFKMDYFSLMFIPVALFITWSIMEFSMWYMHSDPYISQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLSNTNTWDLQQIFMLNQN-PLNLPLMGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNKFAQTMALSLGALTTLFTAICAITQNDIKKIIAFSTSSQLG--LMMVTIGLNQPHLAFLHICMHAFFKAMLFLCSGSIIHSLNNEQDIRKMGGLYKILPFTTTALIVGCLALTGMPFLAGFYSKDPIIEAATSSYTNAWALLLTLIATA-LTAIYSTRIIFFALLGQPRFPPLININENNPLLINPIKRLLIGSIFAGFILTNNIPPMTTPLMTMPLYLKLTALMVTALGFILAFEINLNTQYLK--HTHASNFSKFSTLLGYFPTIMHRLPPHLNLSMSQKLSTSLLDLAWLEIILPKTTSLIQVKAST--LTSNQQGLIKLYFLS---FLITI--TLSLILL----------NYPE---- +>Kogia_breviceps_pygmy_sperm_whale +----MNQNLFASFTTPV-VLGIPIITLIIMFPIILFPTST-RLINNRMISIQQWLTKLTSKQLMGMHNSKGQTWSLMITSLILFIASTNLLGMLPHSFTPTTQLSMNLGMAIPLWAGTVIMGFRNKTKASLAHFLPQGTPTFLIPMLVIIETISLLIQPMALAVRLTANITAGHLLMHLIGMATLALTN-MSLLTALITFVILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFLTILSMY-TTLFILLQLKISNHLYSP-NPKLT-PVKVQKQ-QAP-W-NTTWTKIYLP-LS-QPQ-----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMISIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWAKIHFLIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTSTNLEWLNGCPPPYHTFEEPTYINP-KWS------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINSPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMVLPMEMTIRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKSFEKWSTSML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTVLLILSFLTNALTMCQWWRDVVRESTFQGHHTPTVQKGLRYGMVLFILSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPFEVPLLNTSVLLASGVSITWAHHSLMQGDRKHMLQALLVTILLGLYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCLLRQMKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGLCLITQILTGLFLAMHYTPDTTTAFSSITHICRDVNYGWVIRYLHANGASMFFICLYAHVGRGLYYGSYTFQETWNIGVVLLFTVMATAFVGYVLPWGQMSFWGATVITNLMSAIPYIGTTLVEWVWGGFSVDKATLTRFFAFHFILPFIILALAMVHLLFLHETGSNNPMGIPSDMDKIPFHPYYTIKDILGALLLISALLTLTLFAPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILMLIPMLHTSKQRSMMFRPFSQFLFWTLVADLLTLTWIGGQPVEHPYVTLGQLASILYFLLILVLMPLTSLIENKLL---KW--------MF--------MINILTLILPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTAMFITAPALALTLALTMWSPLPTPYPLINMNLGVLFMLTMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLTTTQEQLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNTLTTILFLGPFHNPHMPETYTTNLVLKTLLLTMSFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHISMPIMTAGI-P-PQT--MNP-FVSIITMTTLILGTMIVITSSHWLFAWIGFEMNTMAMIPIMMKVFNPR-AMEASTKYFLTQATASMLLMMAVVINLLYSGQW--TITKMFNPTASVLMTMALAIKLGLSPFHFWVPEVTQGIPLTTGLILLTWQKLAPLSILYQISPSINVNLMLTM-SLLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILLYNPTMTTLNLLIYITMTYTMFTLLIQNSTTTTLSL---SQTWNKMPITTTFTMLTLLSMGGLPPLSGFTPKWMIIQELTKNEMLIVPTFMAITALLNLYFYMRLTYSTALTLFPSTNNMKMKW-QFYSTKRTTLL-------PTAIVMSTMLLPLTPMLSILL---MN-LLLTLLTNTTLALLLVLIAFWLPQLNTYAEKTSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTSNLKTMLTTALLLISLLAISLAYEWAQGG--LEWAE-MPLIHINIMMAFIMSLVGLLMYRSHLMSALLCLEGMMLSLFILTALLALDSHFILASMIPIILLVFAACEAAIGLALLVMISSTYGTDYVQNLNLLRCMLKFIIPTIMLLPLTWLSKNNLVWINPTTHGLMISLTSL-LLLNQFNDNSLNYS-LTFFSDSLSTPLLMLTMWLFPLMLMASQSHLLKEPPIRKKLYITMLIMLQTSLIMTFTATELILFYIMFETTLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALTYLQNTTGTLNFLLLQYWAEPLP-ASW-----SNTLMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLLLNP-LTELMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITGILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFLPLMASWWLLASLTNLALPPTINLIGELFVVMSTFSWSNFTIVLMGTNILITALYSLYMLITTQRGKYTHHINNLTPSFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSF-ALLTLLILTAPIMMS---NTSLYKN-NNYQLYVKNI-VLCAFTISLIPMTMYLHTNQEALISNWHWITIQTFKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLVSMAWFLSNTNTWDLQQIFALNQN-TPNLPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLMENNKPTQTLALSLGALTTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHSLNNEQDIRKMGGLFKALPFTTTALIVGCLALTGTPFLTGFYSKDPIIEAATSSYTNAWALLLTLIATS-LTAVYSTRIISFALLGQPRFPPHASINENNPLLINPIKRLLLGSLFAGFILSNSIPPMTTPLTTMPPYLKLTALAVTILGFIIALEINLNTQNLK--HTHPSNYTKFSTLLGYFPTTLHRLLPALNLTMAQKLATSSLDTTWLETILPKTTALIQLKAST--LTSNQQGLIKTYFLS---FLTTI--TLSMLLL----------NYPE---- +>Cystophora_cristata_hooded_seal +----MNENLFTSFAAPT-MMGLPIVLLITLFPSILFPSPD-RLINNRLASIQQWLIQLTSKQMLSIHNHKGQTWALMLMSLILFIGSTNLLGLMPHSFTPTTQLSMNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMD-ISTTTAFITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLIVILSMI-LTLFITFQLKISKHLFPM-NPEPK-HTLLLKN-STP-W-EEKWTKIYSP-LS-LPPQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMVWEAFASKREVAAVELTSTNIEWLHGCPPPYHTFEEPTYVVL-K--------MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMYLLMLGLTTNTLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFMRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNSFIDLPTPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYMHVGRGLYYGSYTFTETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGADLVEWIWGGFSVDKATLTRFFAFHFILPFVVSALATVHLLFLHETGSNNPSGITSDSDKIPFHPYYTIKDILGALLLILVLTLLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIMPLLHTSKQRGMMFRPISQCLFWLLVADLLTLTWIGGQPVEHPYITIGQLASILYFMILLVLMPIASIIENNIL---KW--------MF--------MINIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSTTMFIMAPILALALALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIMMNILTTLLFFGAFHNPYMPELYTVNFTMKTLMLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIISASI-P-PQT--MKP-HILIIIMSTVMSGTMIVLTSSHWLLTWIGFEMNMLAIIPILMKNHNPR-ATEASTKYFLAQATASMLLMMGIIINLMFSGQW--TISKIPNPIASGLMTIALAMKLGMAPFHFWVPEVAQGIPLSSGMILLTWQKIAPLSILYQISPSINPKLLVTM-AIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMTTILTYNPTLMTLNLMIYITMTLSTFMLFMHNSSTTTLSL---SNTWNKLPLMTSLILVLMMSLGGLPPLSGFMPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYATTLTMFPSMNNMKMKW-QFESTKKITLL-------PPLIIISTMLLPMTPMTSILE---MN-MTLTLFTNTALASLLVLIAFWLPQLNTYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHTDNLTTMLTMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYANIFLAFIMSLMGLLMYRSHLMSSLLCLEGMMLSLFVMMTVTILSNHFTLASMAPIVLLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIILPTMMLMPLTWMSKPNMIWINTTAYSLLISLISL-SFLNQLGDNCMNLS-LLFFTDSLSAPLLALTTWLLPLMIMASQSHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLVPTLIVITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLFIQNNMGTLNFLMIQLWTQPLS-SSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITALLNP-LTSFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQVLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNITIILTGTNIIITALYSLYMLITTQRGKYTSHIKNIKPSFTRENTLMTLHLMPLLLLSLNPKIILGPIY------MNLFASS-IITTLSMLTLPIILT---STPMYKN-KLYPLYVKTT-ISYAFMISMIPTTMFIFSGQDMIISNWHWMTIQTMKLTLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMNSDPFINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAVLYNRIGDVGFIMAMAWFLINLNTWEFQQIFITHHD-NLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNTMMQTTTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDVRKMGGLYKVLPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETASTSYTNAWALLLTLVATS-MTAAYSTRIMFFALLGQPRFNPMITINENNPLLINSIKRLLLGSIFAGYLISHNISPTSTPQMTMPHYLKLTALIVTLLGFILALELNLTSQNLK--LKYPSNLFKFSNLLGYFPTIIHRYMPVTNLLMSQKLASTLLDMIWLESALPKSISYFHMKSST--TVSNQKGLIKLYSLS---FIITL--VLALMMI----------NFHE---- +>Lagenorhynchus_albirostris_white-beaked_dolphin +----MNENLFAPFMIPI-MLGIPITTLIIMFPTMLFPTPN-RLINNRVIAIQQWLTKLTSKQLMITHSPKGQTWSLMLTSLLLFIASTNLLGMLPHSFTPTTQLSMNLGMAIPLWAGTVFIGFRNKTKMSLAHLLPLGTPTFLIPMLVIIETISLFIQPLALAVRLTANITAGHLLLHLIGSATLALMN-ISLFTALITFIILTLLVILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMI-FTLFALLQLKISKHFYSH-SPKPV-DTKLQKQ-QTP-W-NHTWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQLYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAILLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWTKIQFMIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFEEPVYVNL-KYS------MAYPFQLGLQDAASPVMEELLQFHDHALMIVFLISSLVLYIITSMLTTKLTHTSTMDAQEVETIWTVLPAVILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMVLPMQMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSTSML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSIILLTLSFFTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALLITIMLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIICFVRQMMFHFTSNHHFGLEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKILNDAFIDLPTPSSISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWLIRYLHANGASMFFICLYAHIGRGLYYGSYMFQETWNIGVLLLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVAVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGALLLILTLLALTLFTPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILIFIPMLQTSKQRSMMFRPFSQLLFWTLVADLLTLTWIGGQPVEHPYIIVGQLASILYFLLILVLMPTISLIENKLL---KW--------MF--------MINILMLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTLFMIAPVLALTLALTMWAPLPMPHPLINMNLGVLFMLAMSSLAVYSIMWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLNTTQEKLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGAFHDPYTPELCTTNLIVKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISLPIMTASI-P-PQT--MNP-FISITLLTTLILSTTIVTISSHWLFAWIGLEMNMMAIIPIMMKKPNPR-ATEASAKYFLTQATASSLLMLAIIINLMHSSQW--TIMKLFDPTASILMTMALAIKLGLSPFHFWVPEVTQGIPLSTGLILLTWQKLAPISILYQISPSINLHLMITM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILLYNPALTLLNLLIYIIMNFSMFMLLIQNSTTTTLLL---SQTWNTMPVMTTFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPILMAITALLNLYFYMRLTYSTALTLFPTTNNMKMKW-QFYPTKQMTLL-------PTAIVLSTMLLPLTPALFILL---MN-LLLTLLTNTTLALLLMLIAFWLPQLNIYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLTTMLLTALFLISLLAASLAYEWTQKG--LEWDK-MSLVHINVLIAFTVSLTGLLMYRSHLMSALLCLEGMVLSLFILAALTILNTHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKSNFIWINTTAHSLLISFTSL-LLLNQFNDNSLNYS-LTFFSDPLSAPLLMLTMWLLPLMLMASQFHLLKEPLTRKKLYITMLIILQILLIMTFTATELTMFYITFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALMYLQNTVGSLNFLLLQYWAQPLS-TSW-----SNTFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTEDMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFFPLMTTWWLLACLTNLALPPTINLIGELLVIMSTFSWSNLTIILMGVNIVITALYSLYMLIMTQRGKHTHHINNLTPTFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSS-TLLTLLMLIAPVMAS---STDFYKN-NNYQRYVKNM-TLSAFITSLIPMMMFIHTNQEMLISNWHWITIHTFKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLHNTNAWDLQQIFTLNQN-PPTLPLMGLTLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENSNFIQTMMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALIIGCFALTGMPFLTGFYSKDLIIEAATSSYTNAWALLLTLIATS-MTAIYSTRIIFFTLLGQPRFPPLTNINETNPMLINPIKRLLIGSIFAGFILSNSMPPMNVPLMTMPLYLKLTALMVTILGFIIAFEINTYSKNLK--YSYSSDSTKFSTLLGYFPTIMHRLPPHLVLTMSQKLATSLLDLTWTETVLPKTTALIQLKAST--LTSNQKGLIKLYFLS---FLITM--TLSMLLF----------NYPE---- +>Cephalophus_spadix_Abbotts_duiker +----MNENLFASFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWLLQLISKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYL-DPELM-SMKTSKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNATWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGIYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLLKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYAYTETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYHTIKDILGALLLILALMILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPMASTIENNLL---KW--------MF--------MINILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTVNFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFFIILMTVMFGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASIKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLDLILIL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTVLVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFYTTKQMILL-------PTMVVLSTMLLPLTPILSILE---MN-LMLALLTNLALATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLAVSLAYEWTQKG--LEWTE-MSLVFMNIMVAFTVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTMHSLLISLTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQNHLSKENLTRKKLFITMLILLQLFLIMTFTATELILFYVLFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIHIQNTTGSLNFLILQYWTQPMP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLLLNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLVGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLLLLTIPIMMT---GSPTYKT-PNYPLYVKTT-ISYAFLVSMIPTMMFIYTGQEAIISNWHWLTMQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRIGDIGFILAMAWFLANLNTWDLQQIFMLNPN-NSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSTMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKMMPFTTTALIIGSLALTGVPFLTGFYSKDLIIEAANTSYTNAWALLMTLVATS-FTAIYSTRIIFFALLGQPRFPALIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPYYLKTTALAVTILGFVLALEVSNMTRNLK--FSYPSDTFKFSNLLGYYPMIMHRLTPYLNLTMSQKSASSLLDLIWLENILPKTTSLIQMKMST--MITSQKGLIKLYFLS---FLVTI--LISTILF----------NFHE---- +>Cephalophus_rufilatus_red-flanked_duiker +----MNENLFASFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWLLQLISKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILVLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYL-SPELA-LVKTSKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLMLGLTTNMLTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTYMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGISSDTDKIPFHPYYTIKDILGALLLVLALMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPFLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPMASTIENNLL---KW--------MF--------MVNILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTVNFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFFIILLTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLSNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLDLILIL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMMLLNLIIYIIMTSTMFALFMANSTTTTLSL---SHTWNKMPVMTALILVTLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSILE---MN-LMLALLTNLALATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLILLLAVSLAYEWTQKG--LEWTE-MSLVFMNIMLAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINPTMHSLLISLTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQNHLSKESLTRKKLFITMLILLQLFLIMTFTATELILFYVLFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIHIQNTTGSLNFLVLQYWAQPMP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRVTLLLNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLLLLTIPIMMT---SSPTYKT-SNYPLYVKTT-VSYAFLISMVPTMMFIYTGQEAIISNWHWLTMQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLDSN-NTNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMXLVATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPYYLKMTALAVTILGFILALEISNMTHNLK--FNYPSNTFKFSNLLGYYPMIMHRLTPYLNLTMSQKSASSLLDLIWLESILPKTTSLIQMKMST--MITSQKGLIKLYFLS---FLITI--LVSTILF----------NFHE---- +>Arctocephalus_townsendi_Guadalupe_fur_seal +----MNENLFTSFASPT-MMGLPVVTLIILFPSMLFPSPG-RLINNRLTSIQQWLIQLTSKQMMSIHNRKGQTWTLMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVAMGLRHKTKASLAHFLPQGTPSPLVPMLVIIESISLLIQPMALAVRLTANITAGHLLIHLIGGATLALTN-ISMITALVTFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTIVSMI-LTLFIIFQLKISKHHFPM-SPELK-PLSTSKT-NIP-W-EEKWTKIYLP-LL-LPLQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSLVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFTLDNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFMIWEAFASKREVETIELTSTNMEWLHGCPPPYHTFEEPTYIVS-K--------MAYPFQMGLQDATSPIMEELTHFHDHTLMIVFLISSLVLYIISTMLTTKLTHTSTMDAQEVETVWTILPAIILIMIALPSLRILYIMDEINNPSLTVKTMGHQWYWTYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVIESVPLSYFEKWSASMLQ---------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTHLLLLGLMTNTLTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPMGIMPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALLITILLGLYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSLIDLPAPSNISTWWNFGSLLAACLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTLAETWNIGIILLFTIMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFVASALVMVHLLFLHETGSNNPSGVSSDSDKIPFHPYYTIKDILGALLLILILMLLVMFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLAIIPLLHTSKQRGMMFRPISQFLFWLLVADLLTLTWIGGQPVEYPFITIGQLASILYFTILLILMPVAGIIENNIL---KW--------MI--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSASMFITAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTTLFLGAFHSPYMPELYTINFTLKTLALTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMTLPVITASV-P-PQT--MKP-PIFIMIMTTVVLGTVIVLTSSHWLMIWIGFEMNMLAIIPILMKNFSPR-ATEASTKYFLVQATASMLLMLSIIINLTTSGQW--TVLKLPNPTASNLLTIALAMKLGMAPFHFWVPEVTQGTPLSSGMILLTWQKIAPLSVLYQVAPSINPNLLITM-AIASVLVGGWGGLNQTQLRKILAYSSIAHMGWITIIVMYNPTLMLLNLTIYITMTLGTFMLFMYNSSTTTLSL---SHTWNKLPLMTSLILVLMLSLGGLPPLSGFVPKWLIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTLFPSTNNMKMKW-QFENTKKMALL-------SPLIIISTMLLPMTPMMSILD---MN-MILALLTNTILASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHANNLTTTLTMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYFNIFMAFTVSFVGLLMYRSHLMSSLLCLEGMMLSLFVMMSMTILNNHFTLASMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIVPTIMLMPVTWMSKPHMIWINTTTYSLLISLASL-PLLSQLNDNSLNSS-LLFFTDSLSAPLLTLTTWLLPLMLMASQSHLSKEPLTRKKLYITMLILLQLFLIMTFAATELIMFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYMQNNMGTLNFLMTQYWTQTLP-NSW-----SSILLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-LTSFMAYPFMMLSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPLSYMGATALMIAHGLTSSMLFCLANSNYERTHSRIMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELLVVMASFSWSNATIILMGVNIIITALYSLYMLITTQRGKHTHHIKNIKPSFTRENTLMMLHLMPLLLLSLNPKMILGPLY------MNLFASF-TIMTLFMLMMPIILA---STPIYES-KFYPQYVKTT-ISYAFMTSMIPAMMFISSGQEMIISNWHWMTIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMSSDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRSDANTAALQAILYNRIGDVGFIMAMAWFLTNLNTWDLQQIFMVHHN-DLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNMMMQTTTLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMIVTIGIGQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKPMPFTTTSLIVGNLALTGMPFLTGFYSKDLIIETANTSNTNAWALLLTLVATS-MTAAYSTRMMFSTLLGQPRFNSTISVNENNPLLINPIKRLLLGSIFAGYLMTLNIPPMMIPQLTMPHHLKLTALTVTLLGFTLALELSTTSLDLK--FQHASNLSKFSNLLGYFPTIIHRLVPATNLTASQKLASTLMDMIWLEYLLPKSISHLNVKSSI--TISNQKGLIKLYFLS---FMITL--ILALILTT--------ANSHE---- +>Pteropus_dasymallus_Ryukyu_flying_fox +----MNENLFSSFITPT-MMGLPIVTLIIMFPSMLFPSTN-RLINNRLIAIQQWIIHLTSKQMMAIHNQTGQKWSLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVALGFRHKTKASLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTMTALITFAILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-LTLYIIMQLKVSKHLYHQ-NPEPT-IAKSTKH-STP-W-EDKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNETWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMVFMIWEAFASKREVSAVELTTTNLEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLHFHDHALMIEFLISSLVLYLISVMLTTTLTHTSTMDAQEVETIWTILPAMILIMIALPSLRILYMMDEINNPYLTVKTMGHQWYWSYEYTDYEDLTFDSYMVPTQDLKPGELRLLEVDNRVVLPMELTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLAMWFHFNTPSILLLGLLTNMLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIISEVFFFIGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKPMLHALLTTILLGGYFTLLQASEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLSVCFVRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLFKIINDSLIDLPAPSNISSWWNFGSLLGICLAIQILTGLFLAMHYTSDTTTAFQSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGLYYGSYMYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALVLVHLLFLHETGSNNPTGIPSDSDMIPFHPYYTIKDMLGALVMILALLMLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPLSQCMFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPITSIVENHLL---KW--------MF--------MINLLTMIVPILLAVAFLTLIERKVLGYMQLRKGPNVVGPYGLLQPMADALKLFTKEPLRPLASSPSMFIIAPIMALTLALTMWIPLPMPHPLINMNLAVLFMLAMSSLAVYSILWSGWASNSKYALIGAMRAVAQTISYEVTLAIILLSVLLLSGSFSLSTLIITQEHAWLMLSSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFMAEYANIIMMNTLTAILFTGAFHNPLTPELYTINLIIKTLLLTVFFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVAMPITMAGI-P-PQT--MNP-LVFTMIMSTVMLGTAIVATSSHWLMAWIGFEMNMLAVIPILMKNYNPR-SMEASTKYFLTQATASMLLMLAVTMNLVYSGQW--SITKPLSPTASTIMTLAMAMKLGLSPFHFWVPEVAQGISLPSGLILLTWQKLAPMSILYQISSTIDLDLLMML-SILSIATGGWGGLNQTQLRKIMAYSSIAHMGWMTAILTYNPTMTLLNLVIYILLTTTTFMMFMLNSTTTTLSL---SHTWNKMPLLTTAILLTMLSLGGLPPLSGFMPKWMIIQELTKNDSVIMPTAMAVVALLNLYFYMRLTYSTSLTMFPSTNNMKMKW-QFNYIKSTTHL-------SPLIILSTLILPLSPMLALLE---MN-LMVTLLTNTLLASLLVLIAFWMPQMNTYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLTIMLTMSLTLVSLLAVSLAYEWFNKG--LEWAE-MALTYMNMALAFTVSLLGLLMYRSHLMSSLLCLEGMMLSLFVTMSLTILNSNLVLASMIPIILLVFAACEAALGLSLLVMVSNTYGVDYVQNLNLLQCMLKIIMPTIMLIPLTWLSKNNMIWINTTAHSLIITLLSL-PLLNQFNDNSLNLS-LMYFSDSLSTPLLMLTMWLLPLMIIASQFHLTKETYTRKKLYITMLISLQIFLIMTFTATELIFFYILFEATLVPTLIIITRWGAQTERLNAGLYFLFYTLVGSLPLLVALIYMQNTMGSLNILLTQYWSEPLT-NSW-----GNSFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTVLNP-TTNFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTVLPLMAAWWLLASLTNLALPPSINLIGELFVVMSTFSWSSMSIILMGTNIVITALYSLYMLIMTQRGKQTYHINNIPPSYTRENTLMAMHLLPLLLLSINPKIILGTLY------MNLFTSS-MLLSMLILMAPIVLS---NSNFYSN-KLYPNYVKTM-VSYSFMISLIPMMIFIQSGQETMVSNWHWMTIQTMKLSLSLKLDYFSMIFMPVALFVTWSIMEFSMWYMYSDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFLAAMAWFLLNLNTWELQQIFVLNPT-NTNLPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKTIQTAMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTVGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKTMPFTTTALVTGSLALTGMPFLTGFYSKDLIIEAANTSYANAWALMLTLIATS-LTAVYSTRIIYFALLGQPRYPTLILINENNPLLINPIKRLLVGSIFAGFIISNNITPTTIPQMTMPMYLKMTALFVTLLGFTVALELNMATQNLK--LNNQSNSLKFSNLLGYFPTIMHRLQPLVNLLMSQKVASMLLDMIWLENVLPKSISFFQAKTST--LISSQKGQIKLYFLS---FLITL--TLSLIMT----------NYI----- +>Martes_pennanti_fisher +----MNENLFSSFTTPT-MMGLPIIIAITMFPGIMFPSPN-RLINNRLISIQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTITAAVTFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-ITLFFMFQLKVSKHSFPE-NPEPK-SVSMSKP-TTP-W-EKKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVLTVELTSTNIEWLHGCPPPYHTFEEPTYVLT-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLVMWFHFNSMSLLTLGMTTNLLTMYQWWRDIVREGTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPFEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGLYFTLLQASEYYETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSFIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYMYPETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGGLFLVLVLMMLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILAIIPLLHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFAILLVFMPIISIIENNLL---KW--------MF--------MINIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFMMAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLILPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHTPYLPELYSVNFTMKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASI-P-PQT--MKP-PILTIIMSTVISGTMMVLISSHWLTIWIGFEMNMLAVIPILMKKFSPR-AMEASTKYFLTQATASMLLMLGIIINLLLTGQW--TMLSTPNPIASNVMTVALAMKLGLSPFHFWVPEVTQGIPLSSGMILLTWQKIAPLSVLYQISPSMNPNLLMTM-AVMSVLMGGWGGLNQTQLRKILAYSSIAHMGWMIAVTTYNPTLMMLNLGIYIMMTLGTFSLFMLNSSTTTLSL---SHMWNKLPLITSFILMIMLSLGGLPPLSGFIPKWMIVHELTKNNMIAMATFMAITALLNLYFYMRLTYATALTMFPSTNSMKMKW-QFENTKNATFL-------PPLIITSTMLLPLTPMMLALF---MN-MVLTLFINVSLASLLILIAFWLPQLNIYTEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSINLKTTLTMALALVSLLAVSLAYEWTEEG--LEWNE-MSVVYINIFLAFTLSFMGLLIYRSHLMSSLLCLEGMMLSLFVMMTMAILTNHFTLASMTPIILLVFAACEAALGLSLLVMISNTYGTDHVQNLNLLQCMLKIIIPTMMLIPLTWLSKSNMIWINTTAYSMLISLVSL-TYLNQFTDNNLNSS-LLFFTDSLSAPLLVLTTWLLPLMLVASQHHLSKETLTRKKLYITMLTTLQLFLIMTFTASELIMFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLWMQNNLGTLNLLVIQYWAQPLL-DSW-----SNALLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-LTNYMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLVGELFVVMASFSWSNLTIIMMGINITLTALYSLYMLITTQRGKHTHHVKNIKPSFTRENSLMTLHLLPLLLLSLNPKVILGPL----MEVINLFTSS-ILVTLLMLTFPIMMT---YTTMYTN-KLYPQYVKTT-ISYAFMTSLIPMMMFLHLGQDTMISNWHWVTIQTMKLSLSFKIDYFSAIFVPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMMVLVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMAMAWFLTNLNTWDLQQIFMTNHE-NLNIPLTGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQNMTMQTVTLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLVATS-MTAAYSTRIMFFALLGQPRFNPIITINENNPLLINSIKRLLFGSIFAGFLISYNITPTTTPQMTMPHYLKMMALTVTILGFILALELNLMMQNLK--FKYPSNLFKFSNMLGYFPTVMHRLMPKTNLLMSQKSASTLLDMTWMEKILPKSISHFQMKSSI--TVSSQKGLIKLYFMS---FMLTL--ALSLFAL----------NFHE---- +>Uncia_uncia_snow_leopard +----MNENLFTSFTTPT-MMGLPIVVLIIMFPSILFPSPN-RLINNRLVSLQQWLVQLTSKQMLAIHNRKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRHKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGAALALAN-INASIALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITITSMI-MTLFIMFQLKISKHLYPS-SPELK-STAALKQ-PSP-W-EKKWTKIYSP-LS-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMVWEAFASKREVATVELTTTNLEWLHACPPPYHTFEEPTYVLL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMGTRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEEWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHHNSMLLLTLGMTTNLLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITLLNPLEVPLLNTSVLLASGVATTWAHHSLMKGNRKHMLQALFTTISLGMYLTLLQASEYCEASFTISDGVYGSTFFMATGFHGLHVIIGSIFLIVCFLHQLKYHFMSNYHFGYEAAAWYWHFVGVVWLFL-----------MTNIRKSHPLIKIINHSFIDLPTPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYMHVGRGMYYGSYTFSETWNIGAVLLLAVMATAFMGYVLPWGQMSFWGATVITNLLSSIPYIGSNLVEWIWGGFSVDKASLTRFFAFHFILPFIISALAEIHLLFLHETGSNNPSGMVSDSDKIPFHPHYTVKDILGLLTLTLTLMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILTIIPALHTSKQRGMMFRPLSQCLFWFLVADLLTLTWIGGQPVEYPFITIGQLASILYFSILLVLMPISGIIENRLL---KW--------MF--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAMKLFTKEPLRPLTSSTFMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLATLITTQEYIWLIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHSPYMPELYTTNFTVKTLILTTTFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPIITASI-P-PQT--MKP-PIFIIIMLTVISGTMIVMTTSHWLMVWIGFEMNLLAIIPILMKKYNPR-AMEAATKYFLTQATASMLLMMGIIINLLHSGQW--TVSKDLNPMASIMMTTALAMKLGLAPFHFWLPEVTQGISMSSGLILLTWQKIAPLSILYQISPTINPNLLLTM-AIMSVMIGGWGGLNQTQLRKIMAYSSIAHMGWMAAIMMYSPTMMILNLIIYITMTLTTFMLFMYNSTTTTSSL---SQTWNKTPLITSFILVLMMSLSGLPPLSGFIPKWMIIQELTKNEMIMMPTLLAMTALLNLYFYMRLTYTTALTMFPSNNCMKMKW-RFERTKKTILL-------PPLIVMSTMLLPLAPMLSVLD---MH-VMLTLLTNTLLSTLPVLIAFWLPQLNTYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLSTMLIMALLLISLLAASLAYEWTQKG--LEWTE-MSMVYINMFLAFIMSLMGLLMYRSHLMSSLLCLEGMMLSLFIMMTVAILNNHFTLASMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTAMLMPMTWLSKPNMIWINSTTYSLLISLISL-SYLNQLGDNSLNLS-LLFFSDSLSAPLLVLTTWLLPLMLVASQSHLSKETLARKKLYITMLITLQLLLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLLYTLVGSLPLLVALLYIQNTTGTLNFLIIQYWTKPIS-TTW-----SNIFLWLACMMAFVVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-TTNQMAYPFMMLSLWGMVMTS--SICLRQTDLKSVIAYSSVSHMALVIVAVLIQTPWSYMGATALMIARGLTSSMLFCLANSNDERVHSRTMILARVLQAILPLMAAWWLLASLANLALPPTINLIGELFVVMASFSWSNMTIVLMGTNIIITALYTLYMLTTTQRGKYTHHIKNINPSFTRENTLMALHLLPLLLLSLNPKIALGPIY------MNLFTFS-MLTTVSILFLPIIMS---NTQLYKN-NLYPHYVKTT-ISYAFTISTIPAMMFISSGQETIVSNWHWLSVQTLKLSLSFKLDYFSIIFIPVALFVTWSIMEFSMWYMHTDPHINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFITAMAWFLANMNAWDFQQIFITQHE-NLNVPLLSLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQNKTMQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKPMPFTTSSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALSVTLIATS-LTAAYSTRIMFFALLGQPRFNSLSPINENNPHLINSIKRLLIGSIFAGYLISHNIPPMTTPQMTMPHYLKLTALAVTITGFILALELNLATKNLK--FKYPSNLFKFSSFLGYFPIVMHRLPSTMGLTMSQKSASMLLDMIWLENVLPKSISHFQMKMST--IVSNQKGLVKLYFLS---FMITL--TLSLLLL----------NFHE---- +>Martes_martes_European_pine_marten +----MNENLFSSFITPT-MMGLPIVIAITMFPSIMFPSPN-RLINNRLISIQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFTGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLVVIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTITAMVTFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-ITLFFMFQLKVAKYNFPE-NPEPK-LMSMPKS-TTP-W-EKKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDIWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVLTVELTSTNIEWLHGCPPPYHTFEEPTYVLS-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLVMWFHFNSMALLTLGMMTNLLTMFQWWRDVVREGTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGLYFTLLQASEYYEAPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSFIDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYMYPETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIVSALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALFLILVLMMLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILVLAIVPLLHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFAILLILMPAISIIENNLL---KW--------MF--------MINIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFVMAPILALTLALTMWIPLPMPYPLINMNLGALFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNVLTTILFFGAFHTPYLPELYSVNFTMKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPTMTASI-P-PQT--MKP-PILAVIMSTVISGTIMVLISSHWLTIWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMLGIIINLLLTGQW--AVLNMPSPIASNMMTVALAMKLGLSPFHFWVPEVTQGVPMSSGMILLTWQKIAPLSILYQIAPSMNPNLLMAM-AIMSVLVGGWGGLNQTQLRKILAYSSIAHMGWMIVVTTYNPTLMLLNLTIYIMMTLGTFMLFMLNSSTTTLSL---SHTWNKLPLIASLILMTMLSLGGLPPLSGFIPKWMIIHELTKNDMAIMATFMAMTALLNLYFYMRLTYATALTMFPSTNIMKMKW-QFESTKNTTLL-------PPLIMISTMLLPLTPMMLTLF---MN-MILTLLINASLASLLVLIAFWLPQLNIYAEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSVNLKTTLTMALALISLLALSLAYEWAEEG--LEWNE-MSMVYINIFLAFILSFMGLLIYRSHLMSSLLCLEGMMLSLFVMMAVTILTNHLTLASMTPIILLVFAACEAALGLSLLVMISNTYGTDYVQNLNLLQCMLKIIVPTMMLIPLTWLSKPSMIWINTTAYSMLISLIGL-TYLNQFTDNNLNFS-LLFFADSLSAPLLVLTTWLLPLMLMASQHHLSKETLTRKKLYITMLVTLQLLLIMTFTATELIMFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLWLQSNLGTLNLLVIQYWTQPLL-SSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-LTDFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLVGELFVVMASFSWSNITIILMGINITITALYSLYMLITTQRGKYTHHVKNIKPSFTRENSLMTLHLLPLLLLSLNPKVILGPIY---MKVINLFTSS-ILVTLFMLTLPIMMT---NTSMYIS-KLYPRYVKTT-ISYAFMISLIPTMMFLHLGQDTMISNWHWITIQTMKLSLSFKFDYFSMIFVPVALFVTWSIMEFSIWYMHSDPYINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMAMAWFLTNLNTWDLQQIFMTNHE-NLNIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTLQTITLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLVATS-MTAAYSTRIMFFALLGQPRFSPIITINENDPHLINSIKRLLFGSIFAGFLISYNITPTTTPQMTMPHYLKMMALIVTILGFILALELNLMMQSLK--FKYPSGLFKFSNMLGYFPTIIHRLMPKTNLLMGQKSASTLLDMTWMEKILPKSISHFQMKSSI--AVSNQKGLIKLYFMS---FMLTL--TLSLLTL----------SFHG---- +>Cephalophus_dorsalis_bay_duiker +----MNENLFASFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLVNNRLISLQQWLLQLISKQMMSIHNSKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYL-NPELM-SMKTSKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNATWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLMLGLTTNMLTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTYTETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGVSSDADKIPFHPYYTIKDILGALLLILALMILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPMASTIENNLL---KW--------MF--------MINILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFFIILTTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASIKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLDLILIL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTVLVLITLLSMGGLPPLSGFLPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFHTTKQMTLL-------PTMVVLSTMLLPLTPILSILE---MN-LMLALLTNLALATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLAVSLAYEWTQKG--LEWTE-MSLVFMNIMVAFTVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTMHSLLISLTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQNHLSKENLTRKKLFITMLILLQLFLIMTFTATELILFYVLFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIHIQNTXGSLNFLILQYWAQPMP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLLLNP-VTDFMAYPFIVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINIISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLLLLTIPIMMT---GSPTYKT-SNYPLYVKTT-ISYAFLMSMIPTMMFIYTGQEAIISNWHWLTMQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPN-NSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFVLLGQPRFPALIIINENNPFLTNSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPHYLKMTALAVTILGFILALEISNMTRNLK--FNYPSNTFKFSNLLGYYPTIMHRLTPYLNLTMSQKSASSLLDLIWLENILPKTTSLIQMKMST--MITSQKGLIKLYFLS---FLVTI--LTSTILF----------NFHE---- +>Spilogale_putorius_eastern_spotted_skunk +----MNENLFTSFTTPT-MIGLPIVVIIIMFPSIFFPSPN-RLVNNRLISIQQWLVQLMSKQMLSIHNNKGQIWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVLTGLRHKTKASLAHFLPQGTPVLLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISMI-ITLFIVFQLKISKYNFPK-GPEPN-LTKLTST-TSP-W-EKKWTKIYSP-LS-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVLTVSYTSTNIEWLHGCPPPYHTFEEPAYVTL-K--------MAYPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTNTMDAQEVETGWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEITIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSISML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTHLLLLGLTTNMLTMYQWWRDVIRESTFQGHHTPIVQKGLRYGMVLFILSEVFSFAGFFWAFYHSSLAPTPDLGGCWPPTGILPLNPLDVPLLNTSVLLASGVTITWAHHSLMEGNRKHMLQALFITISLGLYFTALQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIICFLRQLNYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLAKIINNAFIDLPAPSNISTWWNFGSLLGICLILQIATGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYLHVGRGLYYGSYMFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAMVHLLFLHETGSNNPSGMVSDSDKIPFHPYYTIKDILGILLLTLILMALVLFSPDMLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILVLAIIPLLNTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPYIIIGQLASLLYFTILLILMPITSIIENNML---KW--------MF--------IMNIASMIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSLSMFILAPILALTLALTMWVPLPMPYPLINMNLSILFMLAMSSLAVYSILWSGWSSNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIIMMNILTIILFFGAFHNPFMPELYTVNFTIKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVALPIITASV-P-PQT--MKP-PVMIIILSTVIMGTIMVMTSSHWLLVWIGFEMNMLAIIPIFMKKFNPR-AVEASTKYFLTQATASMLLMLGIATNLMLTGQW--TMSNILNPAASNTITIALSMKLGLSPFHFWVPEVTQGIPMLSGMILLTWQKIAPLSIMYQISPSINPNLIITM-ATTSVLVGGWGGLNQTQLRKILAYSSISHMGWMASVLMYSPTLMTLNLLIYMTMTLGTFMLFMYNSSTTTSSL---SHMWNKLPLATSLVLLIMLSIGGLPPLSGFMPKWMIIQELTKNDLIIIPTLLAMTALLNLYFYTRLAYNTALTMFPSSSNMKMKW-QLENLKTMMFL-------SPLIILSIMLLPLSPMMSTLY---MN-IITALFINISLSSLLVTIAFWLPQLNIYTEKASPYECGFDPTGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQSTDLKTVLTMSLMLILLLAASLMYEWTEKG--LEWTE-MPMVYANIFLAFIMSLLGLLVYRSHLMSSLLCLEGMMLSLFIMITITILSNHFTLASMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIFPTMMLIPLTWLSKPSMLWINSTSYSLLIGLISL-IYLNQLTDNNSNLS-LLFFTDSLSAPLLALTTWLLPLMLTASQSHLSKETNTRKKLYITTLVLLQLLLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGSYFLFYTLTGSLPLLVALSYIQNNLNTLNFTTIQLLSQPMS-NSS-----SNMLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITVLLNP-ITNFMAYPFMMLPLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWKFAGATALMIAHGLTSSMLFCLANSNYERVHSRTMILVRGLQTLLPLMAAWWLLASLANLALPPTINLIGELFVIMSSFSWSNITIILMGANVVITALYSLYMLIMTQRGKYTHHIKNIKPSFTRENTLMMMHLLPLLLLSLNPKIIMGPIY------MNLLAPS-IMMILSMLTLPVLLT---CTNLYKN-KQYPQYVKTT-ISYAFMISMIPMMVFLYSGQEAIISNWHWMTIQTMKLSLSLKLDYFSMMFMPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDVGFITAMAWFLLNLNTWDFQQMFMTNHN-NLNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTIQTTTLCLGAMTTLFTAMCALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKLMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETINTSYTNAWALLMTLVATS-MTAAYSTRIMFFALLDQPRFNPTIMINESNPLLMNSIKRLLLGSIFAGFLISHNITPTTIPQMTMPHYLKMTALAVTITGFILALELNLTTQNLK--LKYLSNLFKFSSSLGYFPIIMHRLTPASNLIMSQKLAFMLLDTTWLENIMPKSISNFQVKSSI--LISNQKGMIKLYFMS---FIVTL--VVSMLML----------NFHE---- +>Pseudoryx_nghetinhensis_saola +----MNENLFTSFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLVNNRLISLQQWMLQLVSKQMMSIHNVKGQTWTLMLTSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTFLIPMLIIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTAFITFTILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTTILSMF-LALFIIFQLKISKHDFYC-NPELM-LTKAPKQ-SIP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDMTTTNLEWLNGCPPPYHTFEEPTYVSL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISSMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLMLGLTTNTLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGIYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLVVCFLRQLMFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG---MTNIRKSHPLVKIMNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSITHICRDVNYGWMIRYIHANGASMFFICLYMHVGRGLYYGSYTFMETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAMIHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLTLALMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILTLMPLLHMSKQRSMMFRPFSQCLFWILTADLLTLTWIGGQPVEHPYIIIGQLASITYFLLILVLMPMTSMIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSVSMFILAPILALSLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLIITQEQMWLIFPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTAILFLGTSHNPHMPELYTINFIVKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-ITFIIILLTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKNHSPR-ATEASTKYFLTQSTASMLLMLAVIINLMFSGQW--TVTKLFNPTASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIHPSINPNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMAAVLPYNPTMTLLNLIIYIMMTSTMFMLFMANSTTTILSL---SHTWNKMPIMTILVLTTLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFPLTKKTTLL-------PTMTVLSTMLLPLTPMLSVLE---MN-LMLALLTNFALATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLNTMLTMALLLIILLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFTASLVGLLMYRSHLMSSLLCLEGMMLSLFIMAALTILNLHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTVMLMPLTWLSKNNMVWINPTMHSLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLLKESLTRKKLFITMLILLQVFLIMTFTATELILFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLIALVYMQNMTGSLNFLMVQYWTQPMS-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLFLNP-MTNFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGTNMVITALYSLYMLITTQRGKYTHHINNIPPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNMFSSF-SLTTLLLLTIPIMMT---SPNTHKT-PNYPLYVKTT-ISCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGLILAMAWFLMNLNTWNLQQIFVLNPN-NSNIPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGMFLLIRFHPLTENNESIRSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALITGSLALTGIPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRILFFTLLGQPRFPTLIIINENNPLLINPIKRLLIGSLFAGFIISNNIPPMTVPQMTMPYYLKMAALTITILSFILALEISNMTQNLK--FHYPSNAFKFSNQLGYFPTIMHRLTPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQMKAST--MVTNQKGLIKLYFLS---FLVTI--LISMILF----------NFHE---- +>Hydropotes_inermis_argyropus_Korean_water_deer +----MNENLFASFITPM-ILGLPLVTLIVIFPSLLFPTSN-RLISNRLISLQQWVLQLVSKQMMGIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISTTMAFITFIILVLLTVLEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLVMILSMF-MVLFIIFQLKASKHNFHF-NPEPK-STKMQKQ-NTP-W-EVKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTHYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSIILLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNMRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGVLLLILFLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILVLILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIIIGQLASILYFLIILVFMPIISSIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTLWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-IIFIIILSTMMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKMPVMTVLVLTTLLSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVILSTMLLPLTPMLSVLE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDNLYTMLIMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFTVSLAGLLMYRSHLMSSLLCLEGMMLALFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIMPTMMLMPLTWLSKSSMIWINSTTHSLMISFTGL-LLMNQFSDNSLNFS-LLFFSDSLSMPLLILTMWLLPLMLMASQHHLSKENLTRKKLYISMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALVYLQNINGSLNFMLIQYWVEPLS-NSW-----SNVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITTLLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-TFITLFLLTIPIIIT---SSDNYKT-SNYPLYVKTT-ISCAFITSMIPTMMFIYTGQEMIISNWHWLTIQTVKLSMSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLMNLNAWDFQQIFMLNPN-DSNVPLLGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLNQPRFPTLVIINENNPFLMNSIKRLMIGSLFAGFIISNSIPPMTIPQMTMPYYLKMMALMVTIMGFILALEISNMTQNLK--FNYSSNIFKFSNMLGYFPTILHRLTPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQTKMSI--MVTSQKGLIKLYFLS---FLVTI--VISMILF----------NFHE---- +>Gazella_erlangeri_Neumanns_gazelle +----MNENLFTSFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLMNNRLISLQQWVLQLVSKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYH-NPEPT-SAKTLKQ-STP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMLGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSARPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDVIRESTFQGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINTRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTWISSDADKIPFHPYYTIKDILGALLLILVLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPAASTIENSLL---KW--------MF--------MVNVLMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWMIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFIIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILTTVLLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMGLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISTSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPIMTTLVLTTLLSMGGLPPLSGFMPKWMIIQEMTKNENIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPITKQMTLL-------PTMVTLSTMLLPLTPILSVLE---MN-LMLALLTNLTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLSTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIFPTMMLMPLTWLSKSSMIWINSTSHSLMISFTSL-LLMNQFSDNSLNFS-LIFFSDALSTPLLILTMWLLPLMLMASQHHLLKENLTRKKLFITMLVLLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYIQNTAGSLNFLILQYWVQPMS-NSW-----SNVFTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTLFLNP-VTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPSINLIGELFVVMSTFSWSNITIVLMGLNMVITALYSLYMLITTQRGKYTYHINNILPSFTRENMLMSLHILPLMLLSLNPKIILGPLY------MNMFSSF-TLVTLLLLTIPIMMT---SSNIYKT-FNYPLYVKTT-ISCAFLTSTIPTMMFIHTGQEMVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPHINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLMNLNTWDLQQIFMLNPN-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPALIIINENNPFLINSIKRLLIGSLFAGFVISNNIPPMTVPQMTMPYYLKTMALAVTILGFMLALEISNTTYNLK--FKYPSNAFKFSNLLGYYPMIMHRLTPYMNLTMSQKSATSILDLMWLENILPKTTSLIQMKMST--AVTNQKGLIKLYFLS---FLITI--LVSTILF----------NFHE---- +>Loxodonta_cyclotis_African_forest_elephant +----MNEELSAFFDVPV-----GTMMLAIAFPAILLPTPN-RLITNRWITIQQWLIQLIMKQLLSIHNTKGLSWSLMLITLTLFIGLTNLLGLLPYSFAPTTQLTVNLSMAIPLWTGTVVLGFRYKTKMSLAHLLPQGTPTFLIPMIIIIETISLLIRPVTLAVRLTANITAGHLLIHLTGTATLTLLS-IHSTTITVTFVTVILLTILELAVALIQAYVFALLISLYLHESAMERMDIIIWLLAVVIVL-TTLMIFLHLKTLKIIRLL-FPISK-ELSKKSC-VFP-W-KKKWTKNYPP-SSMYP------MFANRWLYSTNHKDIGTLYLLFGAWAGMVGTAFSILIRAELGQPGSLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILSAINFITTIINMKPPAMSQYHMPLFVWSILITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMVSHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLNYTWAKIQFLVMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTAWNTASSMGSFISLVAVILMVFMIWEAFASKREVSVTELTTTNVEWLNGCPPPHHTFEEPAYVKS-NS-------MAYPLQLGFQDATSPVMEELLHFHDHTLMIIFLISSLVLYIIMLMLTSKLIHTNMMNVQEMEMIWTILPAIILILIALPSLHTLYMMDEINNPLLTIKTMGHQWFWSYEYTDYEDLAFDSYMITTDSLKFGELRLLEVDNRMVLPTDLPVRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQVTLTSMRPGLFYGQCSEICGANHSFMPIVLELVPLKYFESWSASLA----------MTHQTHAYHMVDPSPWPLTGALSALLMTSGLTMWFHYHSVTLLLLGLMTNMLTMFQWWRDVVREGTFQGHHTPVVQESLRYGMILFITSEVLFFTGFFWAFYHSSLAPTPELGSYWPPVGVYPLNPLEVPLLNTSVLLASGVTITWAHHSLMEGNRKNMLQALLITILLGVYFTLLQMFEYYEASFTISDGIYGSTFFVTTGFHGLHVIIGSTFLLTCFIRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYLSIYWWGS--MTHIRKSHPLLKIINKSFIDLPTPSNISAWWNFGSLLGACLITQILTGLFLAMHYTPDTMTAFSSMSHICRDVNYGWIIRQLHSNGASIFFLCLYTHIGRNIYYGSYLYSETWNTGIMLLLITMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGTSLVEWIWGGFSVDKATLNRFFALHFILPFTMIALAGVHLTFLHETGSSNPLGLISDSDKIPFHPYYTIKDFLGLLILILLLLLLALLSPDMLGDPDNYMPADPLNTPLHIKPEWYFLFAYAILRSVPNKLGGVLALFLSILILGLMPLLHTSKYRSMMLRPLSQILFWTLTMDLLMLTWIGSQPVEYPYIIIGQMASILYFSIILAFLPIAGMIENYLI---K---------MF--------LINVLTVTLPILLAVAFLTLVERKALGYMQLRKGPNVVGPYGLLQPIADAIKLFTKEPVYPQTSSKFLFTVAPILALTLALTVWAPLPMPYPLINLNLSLLFILAMSSLMVYSILWSGWASNSKYALMGALRAVAQTISYEVSMTTIILSMVLMNGSFTLTAFATTQERLWLIFPMWPLMMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFMAEYANIIMMNALTVILFMGTSCDPQTPEISTINFVMKTIILTICFLWVRASYPRFRYDQLMYLLWKNFLPLTLALCMWHISILISLACI-P-PQV--MNP-LALSLILTTLLAGTLITMMSSHWLTAWMGLEMNMLTMIPILMKTTNPR-STEAATKYFMTQAMASMMLMMALTINLMYSGQW--SITKMTNPVASNMALMALMTKLGSAPFHFWVPEVTQGVELAPGMILLTWQKLAPLSLLYQMATYTNTSLIYLS-GLLSILIGGWGGLNQTQLRKILAYSSVSHMGWMLIILPFNPTLTLLNLAIYITLTLSIFMILANTFTTSMSSL---TLMWNKTPAMTIMLMATLLSLGGLPPLSGFMPKWLMIHELTKNNSIIMPLTMAIMTLLNMYFYMRLIYYSSLTILPSTNNMKMTW-QFTNTKHTMTL-------PTLIILSNMLLPLTPMISMLE---MN-LMTTLLTNTMLTSLMVLIAFWLPQTYTYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQANDTNLTLLMSFMLIILLAIGLAYEWLQKG--LEWTK-MPYIYMNIMLAFVISLIGTLMYRSHLMSSLLCLEGMMLSLFTLNALLSLNMNFTLSTTVPLILLVFAACEAAVGLALLIMISNTYGLDYVQNLNLLQCMLKTILPTIMLIPLTWFTSNNMVWINTTLYSFAISLTSL-HLLYQPLDNSLSLS-PKFFLDSLSTPLLILTIWLLPLMLIASQSHLSSESTFQKKSYITMIVFLQVSLIMTFAATDLILLYIMFETTLIPTMIIITRWGNQLERLDAGSYFLFYTLMGSLPLLVTLMLIQNTLGSLNLMMLPYLIKSID-NLW-----STNMLWLTCTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITILLDP-LTTHMYYPFLMLSLWGMVMSS--SICLRQTDMKSLIAYSSVSHMALVIIAIMLQTPWSFMGALTLMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLINMAPPPTINLIGELLIITTSFSWSNLTIFPMGLNVLITTMYTLHMMTTTQRGKTSHHAKSIKPSFTRENTLMALHFLPLLLLSLNPKIILGLTY------MNLIPTL-TLTSLIILTLPITAT---LLQNNKT-NCFLYTTKTA-VTYAFAISLIPTLLFVQSNQEAYISNWHWMTIYTLKLSLSFKLDFFSLTFMPIALFITWSIMEFSLWYMHSDPHINRFFKYLLLFLITMLILVSANNLLQLFMGWEGVGIMSFLLISWWHGRTDANTAALQAMLYNRIGDMGFIMMMAWFIIHLNSWEFQQIFLTNPK-NTTLPLLGLLLASAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVMAGVFTLIRFYPLMENNLTIQTLTLCLGAITTLFTAICALTQNDIKKIIALSTSSQLG--LMMVTIGINQPHLAFTHMCTHAFFKAMLFLSSGSIIHNLNNEQDIRKMGGLYKTMPITSTAIIIGSLALTGMPFLTGFYSKDPIIETANMSYINTWALLVTLIAVS-MTASYSTRIIFFALLGQPRYPSLTQINENNPYLINPIKRLILGSIFMGFFISMNTIPHTTPQMTMPLHLKLMALAVTLLGFTVATELNNMTHNLM--FKQPSRMHTFSTTLGYYPTTTHRILPYLSLTMSQNLATTIMDSIWLEKMIPKNLMTMQKTAAS--LVSNQKGLMKLYFLS---FLLSI--TLGLLIAL----------------- +>Acomys_cahirinus_Egyptian_spiny_mouse +----MNENLFSSFITPT-LMGLPVVIIIITLPFIMFPNSK-RLFNNRLISLQQWLIKLIMKQMMLIHTPKGRTWSLMIISLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVIMGFRHKLKDSLAHFLPQGTPITLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMS-ISPPTALITFIILLLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITALSST-ATLFILLQLKLSNIYYFN-APTPK-TLKSLKT-ENP-W-EMKWTKIYSP-HS-LPPH----MFINRWLFSTNHKDIGTLYLIFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYSLNDMWAKAHFIVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNMVSSMGSFISLTAVIIMIFIIWEAFASKREILSVPYTATNLEWLHGCPPPYHTFEEPTYVKV-K--------MAYPFQLGLQDATSPIMEELTSFHDHTLMIVFLISSLVLYIISSMLSTKMTHTSTMDAQGVETIWTILPAAILVLIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMTPTSDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHAWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSASMI----------MNHQTHAFHMVNPSPWPLTGALSALLLTSGLIMWFHYNSTILLTTGLLTNLLTMYQWWRDVIREGTFQGHHTPIVQKGLRYGMILFIVSEIFFFAGFFWAFYHSSLVPTHDLGGFWPPAGISPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRMHMNQALSITIALGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGTTFLMICLLRQMKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MKIMRKTHPLLKIINHAFVDLPAPSNISSWWNFGSLLGVCLVMQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFVCLFMHVGRGIYYGSYTFTETWNLGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGVNSDADKIPFHPYYTIKDLLGVFLMLLILLLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLIHTSKQRSLMFRPISQAMFWILTANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGLIENKML---KLN-------MP--------LINTLTLLIPILMAMAFLTLVERKMLGYMQLRKGPNIVGPYGILQPFADAMKLIIKEPLRPLSTSVVLFIIAPTLSLTLALSLWIPMPMPHPLANMNLSTLFILALSSLSVYSILWSGWASNSKYSLFGAIRAVAQTISYEVTMAIILLSVLLMNGSFSLQTLIITQEHMWLIIPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFMAEYTNIILMNALSSIMFMAPLYYADHPETFTTNFMLKTLMLTSLFLWVRASYPRFRYDHLMHLLWKNFLPLTLALCMWYVSLPIFLSSI-P-PYS--MNP-LTLLTVSLTILMGPIVTMMSSNLLLMWVGLEMSLLAMIPLLTHKKSPR-STEAATKYFMTQATASMIMLLAIILNHIQLGSW--NMHPQTNKLTLTIMFIALVIKLGLAPFHTWLPEVTQGVPLSSGLILLTWQKIAPLSILYQIHELLDPLLTTTI-SIISVFTGAWGGLNQTQMRKIMAYSSIAHMGWMLAILPYNPSLTLLNLTIYILMTISMFLMLMTSSYTTINSI---SMAWNKHPIMIPLMATVLLSLGGLPPLSGFMPKWLIITELLKNNSTPAASLIALMALLNLFFYTRLIYSTSLTIFPTNNNSKLIP-QQLASKHFPMM-------PLLMTLSTMILPLTPLLIL-----MN-MLLAVTINITLSLLLITVAFWMPQTNIYTEKANPYECGFDPINSARLPFSMKFFLVAITFLLFDLEIALLLPIPWAIQTPKVHYMMLYAFLLISILSLGLAYEWMHKG--LEWTE-MSPIYINLTLAFSLSLLGTLMFRSHLMSSLLCLEGMMLSLFIMTSASSLNTNSMTFFPIPITILVFAACEAAVGLALLVKVSSTYGTDYVQNLNALQCMLKIIMASTMLLPLTWLSKNKYMWINVTSHSFMISLTSL-TLLWQ-NENCTTFS-ISLFSDHISTPLIILTTWLLPLMLLASQNHMKKENPTHKKLYITMLILLQILLILTFSATEMIMFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSIPLLIALIMTQNSTGTLNFMLMTLNSQTMN-TTW-----SNNILWLTCMLAFLIKMPLYGVHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRISIMLDP-MTKSMSYPFIILSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSFMGAMALMIAHGLTSSLMFCLANSNYERTHSRTMILARSLQTIFPLMAIWWVLASLANLALPPSINLIGELLITMSLFSWSNPSIILLGVNIIITALYSLYMIIMTQRGKLNYHINNLHPSHTRELTLMSLHIMPLILLTVKPELILGYM-------MNLITPL-TLLTLLTLLLPTLLS---LTHLMKH-TKFPHYATLS-IKNAFLISLVPLATLLHYNIESMISSWHWMTINTINLSISFKIDFFSILFLSVALFVTWSIMEFSSWYMHSDPDLNRFIKYLLLFLITMIILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRTEANTAALQAILYNRIGDIGLILAMTWFCLNYNSWEMQQILMH-NN-NNTIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLMIRFFPLTSNNSTILTLMLCLGSITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICMHAFFKAMLFMCSGSIIHNLNDEQDIRKMGSTTQTLPFTTSCLTIGSLALTGMPFLTGFYSKDLIIEAVNTSNTNAWALLITLIATS-LTAAYSMRIIYFVTMTKPRYPPMMSMSENNPKLINPIKRLALGSIFAGYIISHNIPPINTQTMTMPWQLKMTALFITITGLLVALELNNLTSNLT--PNKTSPYSTFSALLGYFPTITHRLIPAKTLNLGMKISLNTLDQTWLETAIPKSTSTLHTMMSK--HISNQKGLIKIYFLS---FLVSM--TLIPLLLLP--------SYLEWSQ- +>Erinaceus_europaeus_western_European_hedgehog +----MNENLFTPFIAPT-LLGIPVAILIIMFPSLLFIKHT-RLFSNRIMILQQWMIKKTTKQMMSNHNPKGQTWALLLMSLMMFISSSNILGLLPHSFTPTTQLSMNLGMAIPLWAGAVIMGFRLKLKNSLAHFLPQGTPLPLIPMLIIIETISLLIQPMALAIRLTANITAGHLLIHLIGSAVLNLLA-INPSVAMLTLIILLLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSSWFTMILAMF-LTLFIIMQLKINSYKTYN-MMETK-KQTLNHS-LKP-W-EHKWTKIYLP-LL-LPLHY---MFISRWLFSTNHKDIGTLYLLFGAWAGMVGTSLSLLIRMELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMLGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFILLLTSSMVEAGVGTGWTVYPPLAGNMAHAGSSVDLAIFSLHLAGVSSILGAINFITTIINMKPPAVSQYQTPLFVWSILITAILLLLALPVLAAGITMLLTDRNLNTTFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVAYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGHIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIGGFIHWFPLFTGYTLNDTWAKIHFIIMFMGVNVTFFPQHFLGLAGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFLIWERFAAKREILKIEFTNTNIEWLHGCPPPYHTFEEPTYVLT-K--------MPYPLELGLQDASSPIMEELLYFHDHTLMIVFLISSLVLYIISAMLTTNLMHTSTVDAQEIETVWTILPAIILILIALPSLRILYLMDEMNNPSLTMKTLGHQWYWSYEYSDFEDLSLDSYMIPTSDLNLGMFRLLEVDNRIILPTNTTTRILVSSEDVLHSWAIPSLGIKTDAIPGRLNQATLMITRPGVYYGQCSEICGANHSFMPITIEAVPLTYFEKWTSSIT----------MTHQMHAYHMVNPSPWPLTGALSALLITSGLMMWFHSNSIFLLVLGLITNILTMFQWWRDIIREGTFQGHHTPIVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLVPTTELGGYWPPAGIKPLNPLEVPLLNTAVLLASGVSVTWAHHSILEKDRINAIQALIVTISLGLYFTLLQIMEYYESPFTIADSVYGSTFFMATGFHGFHVIIGSSFLFICLMRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MMNMRKTHPLMKIINNSFIDLPTPSNISSWWNFGSLLGLCLITQIITGLFLAMHYTSDTLTAFSSITHICRDVNYGWLIRYTHANGASMFFMCLFLHIGRGLYYGSYLFYETWNIGIILLIITMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGSFSVDKATLTRFFAFHFIFPFIIVAMVMIHLLFLHEAGSNNPTGITSESDKISFHPYYTLKDMLGMMFMFLILMSLVLFYPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALFMSILILFLLPYLHTSKHRSMVFRPVSQCIFWLLVSDLLILTWIGSQPVENPFITIGQLASIYYFLSILILIPLAGLIENYMF---KW--------ML--------MINILCLIIPILLAVAFLTLIERKVLGYMQLRKGPNIVGSFGLLQPIADAVKLFTKEPILPITSSLFLFVAAPILAITLALMLWVPMPMPQPLININLNLLFILALSSLAVYSILWSGWASNSKYALIGGLRAVAQTISYEVTLAIILLSLLMFNGSFSLNNFIYTQENLWLLVSTWPLMMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNALTVILFLAPSNSMYLPEMFTMKFMPMIILMTMLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYTSLPITLASF-P-PQ---MNP-ILALFIYFMLTMGTIMVLISSHWLLIWMGFEMNLMAMIPIMMIKQNSR-STESAIKYFLVQTTASIMLMMSVSINLMMTGQW--TVTCTNN-MLSSIITISMLMKLGAAPFHMWLPEVAQGLSLSSSMILLTWQKIAPMSVLYLLSPSLNIYIMFIS-AFLSIALGGWGGLNQTQLRKMMAFSSIAHMGWMMAILCYNPNIMIINLIIYLMMTITLFYIFKNNSTTNIANL---SLIWNKSPLMALLLALILLSLGGLPPLTGFLPKWMVAQELVNNDNTIMALIMLMLALINLFFYLRLIYSSSLTMFPSMNNVKLNW-QYTKSNKYTLI------IIILSVISILMLPLSPMFINFY---MT-LMIMIFTNTTLAIMLVIIAFYWPQLNAHVEKISPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPIPWLMNSSNTTTSIMIVLILIMALASSLAYEWMKEG--LEWK--MSIMFMNVMMAFSIALIGMLLYRHHLMSSLLCLEGMMLATYIFISLVSLNMHFTMTYMIPLVILVFAACEAALGLALLVKMYNYHGNDYVQNLNLLKCMLKVIMSTIMLIPLTWLSKSKHLWINTTLYSFLIALTSL-MYLNKQYYMWTSSS-ITYFSDHISTPLLILTTWLLPLMIIASQYHLQKENLNQKKFYISMLIFLQILLIMTFTASEMFLFYILFEATLIPTLVIITRWGNQIERLNAGSYFLFYTLTGSLPLLVALLYLKKMNYSTHFVFMSLISDHYT-MDW-----SNSLLWLSCMMAFMVKMPLYGIHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRINMLTAP-ITSTMYYPFIILSLWGMIMTS--CICLRQTDLKSLIAYSSVSHMALVIAAIMIQTPLSYMGATTLMIAHGLTSSLMFCLANTNYERTHSRTMFLTRGLLIILPLMATWWLIASLNNLALPPTINLIGELFILMSLYSWSKFTIILTGLNMMITVSYTLYMLIITQRGLPSHHIISIKPSFTRENLLMTLHIIPLVLLIIKPHIILGNTL--------MMAST-TLITLVIMNMPILLS---ISPNYNM-QNFPTHVKLS-VKIAFMMSLVSLISFIMSEHEAVIFNWHWMTIQSMEIFMSFKLDYFSILFLPTALFVTWSILEFSMWYMYSDPNIHKFFKFLLIFLSTMLILVTANNLLQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAMLYNRIGDIGFILMMTWFLLNSNSLDLQQIMLIKET--SNTPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFHPMLIYNSMILTMTMCLGAMTTLFAAMCALTQNDIKKIIAFSTSSQLG--LMMVAIGINQPYMAFFHICTHAFFKAMLFLCSGSIIHNMKDEQDIRKMGSIYKTMPLTSSALIVGNLALMGMPYLSGFYSKDLIIEAINTSYTNAWALTMTIIATS-MTAVYSIRMIIMILLKNPRYNTMVSINENNMYMTNSIKRLMIGSIFTGFMFTYSINPLFIPPTTMPQYMKLLTLIATFIGLMVALDLSLMAQFLK--MPYNSYSFKFSNLLGYFTYITHRYPIITSLKNSQNMSFFLLDQSWYEHNLPIMLINSHKQMSK--YLSKQTGLVKFYFLS---FFISLSILLPLLLFIV---------------- +>Dasypus_novemcinctus_nine-banded_armadillo +----MNENLFASFATPT-MMGLPIIMLIIMFPSILFPTPK-RMITNRVVSVQQWLINMIMKQMMNIHNNKGRTWTLMLISLITFIGTTNLLGLLPHTFTPTTQLSMNLGMAIPLWAGAVVTGFRHKTKASLAHFLPQGTPIPLIPMLIIIQTISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISPTTASITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIVSML-LSLFILMQLKFIKFSSFS-TPCPT-TMEKTKH-LTP-W-EMKWTKTYLP-HS-LPLP----MFITRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGMLLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNLTWAKIHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVDVVELTPTNLEWLHGCPPPYHTFEEPAFVKV----------MPYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEINNPLLTIKAMGHQWYWSYEYTDYEDLNFDSYMVPTSDLKPGELRLLEVDNRLVLPMELSIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLMATRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEDWSTSML----------MTHQTHAYHTVNPSPWPLTGALSALLMTSGLIMWFHFNSPLLLVLGLTTNFLTMYQWWRDIIRESTFQGHHTTIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGHRKHMLQALFITIALGVYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSSFLIVCFMRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKNHPLLKIVNQSFIDLPTPTSISAWWNFGSLLGICLAMQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASLFFMCLYLHIGRGLYYGSYTFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVVVHLLFLHETGSNNPTGISSNMDTIPFHPYYTIKDILGLILMILLLMTLVLFYPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVCSILVLAIIPLLHTAKQRSLMFRPISQCLFWLLAANLMILTWIGGQPVEHPFIIIGQVASISYFTIILVLMPIAGLIENKLM---KW--------MY--------LINVLSLIIPILLAVAFLTLLERKILGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSKLMFTLAPTLALTLALSLWIPIPMPYPLVNLNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMMTNGSFTLSTLTTTQEHMWLIFPLWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNALTAILFFGAMHNPMFPELHTLNLITKTLILTMMFLWVRASYPRFRYDQLMHLLWKSFLPLTLALCMLHVSAPATFAGV-P-PHM--MNP-LIFIIIMFTLILGTVITMISSHWLLIWMGLEMNMFSMIPIIMMKSHPR-STEAATKYFMTQATASMLLMMGVIINLYYSGQW--TIMNSLNPVTSYMMTIALAMKLGLAPFHFWVPEVTQGTQLTSGMILLTWQKLAPMTILYQIHSSLNLNLMLTL-AILSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIIMYNTSLMMLNLVIYLMMTITMFALFINSTTTTTLSL---SLTWNSTPILTTMLLTTLLSLGGLPPLSGFAPKWMIIQEMTKNNMLLLPTTMAIMALLNLYFYMRLIYSTSLTMFPTTNNNKMKW-KYKTQNFIPLS-------PTLITLSTMLIPLTPMMLILN---MN-IMITLFINMSLASLLVLIAFWLPQLNTYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQANTMTPMLTTALVLILLLALGLAYEWLQKG--LEWNE-MPSIYLNIIMAFSIAMVGVLVYRSHMMSSLLCLEGMMLSLFILSTLMILSMHFTMAMMMPIILMVFAACEAAVGLALLVMVSNTYGLDHVQNLNLLQCMLKLIMPTIMLIPLTWLSKKNMVWINSTTHSILISLISL-SMLFQTTDSNMNFS-LMFFADPLSTPLIILTTWLLPLMIIASQSHLIKETTTRKKLYISMLITLQALLIMTFSATELILFYILFEATLIPTLILITRWGNQTERLNAGFYFLFYTLAGSLPLLVILLYMQNTMGSLNMLLIQYFPQTLT-HTW-----TAKLMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITMILEP-TTTSMSYPFMMLSLWGMVMTT--RICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSYMGATALMIAHGLTSSMLFCLANTNYERTHSRTMILARGLQTLLPLMASWWLLASLTNLALPPTINLIGELLVTMTTFKWSNLTILALGLNMLITALYSLYMLITTQRGKFTYHTYSIKPTFTRESTLMLMHLLPIMLLSINPKIILGPLY------MNLIMPF-SIITLTILTIPIMMS---YTNKYKT-KSYPYHVTSS-VSYAFMTSMIPTMMFLLSNQDSYISNWHWMTMQTMKLSLSFKLDFFSIIFVSVALFVTWSIMEFSLWYMHSDPYINQFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILTMAWLLLHLNSWDLQQIFMLKPT--NLLPLLGLLVAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLMQNNPTILTMTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNNEQDIRKMGGLLKAMPFTSSCLMIGSLALTGMPFLTGFYSKDLIIESANTSYSNAWALLITLLATS-FTASYSTRLIYFSSLGPPRYLPLITINENNPNLLKPIKRLALGSIFAGFLISNYIPPLITPQTTMPLYMKLSALAVTIMGFMVAMGLNNITLNLK--PERPNPLHSFSSLLGYYPNIIHRTTPYYILMMSQNLA-SLTDILWLEKLAPKSLSQMQLSASM--ITSNQKGLIKLYFMS---FIISM--TLATMLI----------I------- +>Pseudorca_crassidens_false_killer_whale +----MNENLFASFMTPI-MLGIPITTLIIMFPTMLFPTPN-RLINNRVITIQHWLIKLMSKQLMVMHNPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNLGMAIPLWAGTVFIGFRNKTKMSLAHLLPLGTPTFLTPMLVMIETISLLIQPLALAVRLTANITAGHLLLHLIGNATIALMSIITLFTALITFIILTLLVILEFTVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMT-FTLFALLQLKISKHFYSP-SPEPV-NTKLQKQ-QTP-W-NHTWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQLYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAILLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMVSHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWAKIQFMIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFEEPVYVNL-KYS------MAYPFQLGLQDAASPVMEELLQFHDHALMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTVLPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMVLPMQMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQMTLTSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSMILLTLSLLTNILTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIRPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALLITIVLGLYFTLLQASEYYEAPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWFIRYLHANGASMFFICLYAHIGRGLYYGSYMFQETWNIGVLLLLAVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFTLHFILPFIITALTATHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGALLLILTLLTLTLFTPDLLGDPDNYIPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILIFIPMLQTSKQRSMMFRPFSQLLFWTLIADLLTLTWIGGQPVEHPYIILGQLASILYFLLILVLMPTVSLIENKLL---KW--------MF--------MINILTLTLPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFMIAPVLALTLALTMWTPLPMPHPLINMNLGALFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLNTTQEKLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYTAGPFALFFLAEYANIIMMNMFTTILFLGASHDPHMPELCTTNLIIKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTAGI-P-PQT--MNP-FISITLLTTLVLSTTIVTISSHWLFAWIGLEMNMMAIIPIMMKKPNPR-ATEASTKYFLTQTTASSLLMLAIIINLMHSSQW--TIMKLFDPTASILMTMALAIKLGLSPFHFWLPEVTQGIPLSTGLILLTWQKLAPISILYQISPSINLHLMITM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILLYNPTLTLLNLLIYIVMTFTMFMLLIQNSTTTTLLL---AQMWNTMPTMTIFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPILMATTALLNLYFYMRLAYSTALTLFPSTNNMKMKW-QFYPTKQMTLL-------PTAIVLSTMLLPLTPTLFMLL---MN-FLLTLLTNTTLALLLMLIAFWLPQLNIYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLTTMLPMALFLISLLAASLTYEWTQKG--LEWDK-MSLVHINILIAFTVSLTGLLMYRSHLMSALLCLEGMVLSLFILATLTILNMHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKSNFIWINTTTHSLLISFTSL-LLLNQFNDNSLNYS-LTFFSDPLSAPLLMLTMWLLPLMLMASQSHLLKEPLARKKLYITMLIMLQTLLIMTFTAMELIMFYITFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALTYLQNTVGSLNFLLLQYWAQPLS-TSW-----SNTFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTEHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFFPLMTTWWLLACLTNLALPPTINLIGELLVIMSTFSWSNLTIILMGMNIVITALYSLYMLIMTQRGKHTHHINNLTPTFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFISS-TLLTLLMLIAPLMAS---STDLYKN-NKYQHYVKNM-TLFAFITSLIPMMMFIHTNQEMIISNWHWTTIHTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLIFLITMLILVTANNLFQLLIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLHNTNAWDLQQIFTLNQN-PPILPLMGLTLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNKFIQTTMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALIIGCFALTGMPFLTGFYSKDLIIETATSSYTNAWALLLTLIATS-MTAIYSTRIIFFTLLEQPRFSPLMNINETNPMLINPIKRLLIGSILAGFILSNSMPPMNTPLMTMPLYLKLTALMVTILGFILAFEINTYSKNLK--YPYSSDYTKFSTLLGYFPMIMHRLTPHLILTMSQKFATSLLDLTWTEMILPKTTALIQLKAST--LTSNQKGLIKPYFLS---FLITM--TLSMLLF----------NYPE---- +>Bubalus_bubalis_Swamp_buffalo +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTPN-RLMSNRLISLQQWMLQLVSKQMMSIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISMTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LALFIIFQLKISKHSFHH-NPEPT-PTKMPKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLMLGLTTNMLTMYQWWRDIIRESTFQGHHTSAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGSRNHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG---MTNIRKSHPLMKILNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGMYYGSYTFLETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDTDKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPFSQCLFWILVANLLTLTWIGGQPVEHPYIIIGQLASITYFLLILVLMPTASMIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSASMFILAPILALGLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLIITQEQTWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTAILFLGTSHNPYMPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSLPILLSSI-P-PQT--MNP-IIFFIILSTVMMGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKNHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTM-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLTIYIIMTSTMFMLFMANSTTTTLSL---SHTWNMMPIMTVLILMTLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLAYSTTLTMFPSTNNMKMKW-QFSLTKQTTLL-------PTMVVLSTMLLPLTPMLSLLE---MN-LMLALLTNFTLATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIILLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSLVGLLMYRSHLMSSLLCLEGMMLSLFVMAALTILNLHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLKCMLKYIIPTMMLMPLTWLSKNNMIWINSTAHSLLISLTSL-LLMNQFGDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALVYIQSTMGSLNFLMLQYWTQPMS-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELLVVMSTFSWSNTTIILMGANMVITALYSLYMLIMTQRGKHTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFPSL-MLTTLFLLTLPIMMT---SLNTHKN-PNYPFYVKTA-ISCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRIGDIGFILAMAWFLANLNTWDLQQIFMLNPD-NSNVPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLSKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPLLINSIKRLLIGSVFAGFIISNSIPPMTIPQMTMPYYLKTTALMVTVLGFILALEVSNMTQNLK--FNYPSNAFKFSNMLGYFPVIMHRLASYTNLTMSQKLASSLLDLIWLENILPKTTSLIQMKASI--TVTNQKGLIKLYFLS---FLITI--IISMALF----------NFHE---- +>Nanger_granti_Grants_gazelle +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLMNNRLITLQQWALQLVSKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYH-NPEPT-PTKTLKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSVALLMLGLTTNTLTMYQWWRDVIRESTFQGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINTRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNVGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILALMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPLSQCLFWLLVADLLTXTWIGGQPVEHPYIIIGQLASITYFLLILVLMPVASTIENKLL---KW--------MF--------MMNILTLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWMIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILTTVLLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKMPIMTVLILATLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSITKQMTLL-------PTMVTLSTMLLPLTPILSILE---MN-LMLALLTNLTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMVAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIFSTMMLMPLTWLSKSSLIWVNSTTHSLLISFTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLVLLQTFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALTYVQNTAGSLNFLILQYWVQPLS-NSW-----SNVFTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQMFLPLMATWWLLASLANLALPPTINLIGELFVVMSAFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTYHINNILPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLVTLLLLTVPIMMT---SSDTYKT-SNYPLYVKTT-ISCAFLTSMIPTMMFIHTGQEMVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGVMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLMNLNTWDLQQIFMLNPS-NSNLPLIGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPMTVPQMTMPCYLKMMALAVTILGFILALEISNTTYNLK--FKYPSNAFKFSNLLGYYPTIMHRLTPYANLTMSQKSASSILDLIWLENILPKTTSLIQMKMST--VVTNQKGLIKLYFLS---FLITI--LVSTILL----------NFHE---- +>Eulemur_fulvus_mayottensis_brown_lemur +----MNENLFASFITPT-IVGIPIVIFIVMIPSILFPSPT-RLINNRLTSLQQWLIQLILKQLMLIHSIKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAAAVIKGFRHKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLSS-ISPTTASITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITIFSMI-LTLLIVFQLKVSKFNYPL-SPTLK-DINKYSH-TNP-W-ETKWTKIYLP-LS-LPQQL---MFINRWFYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDTWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSIGSFISLTAVMLMVFMIWEAFASKREVLMVELTPTNLEWLHGCPPPYHTFEEPAYVKA----------MAYPVQLGFQDAASPIMEELLYFHDHTLMIMFLISSLVLYIISLMLTTELIHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEITTPSLTLKTMGHQWYWSYEYTDYENLCFDSYMTPPSDLKPGELRLLEVDNRVVLPTELPIRMLISSEDVLHSWTIPSLGVKTDAIPGRLNQATLMASRPGVYYGQCSEICGANHSFMPIVLELVPLKHFEEWLLSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNNTTLLSMGMLTNLLTMYQWWRDIVREGTFQGHHTSIVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGDRTHMLQALLITITLGIYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MNNIRKNHPLMKIMNNSFIDLPAPSNISSWWNFGSLLGACLALQIITGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFLCLFIHIGRGLYYGSFTLTETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVLVHLLFLHETGSNNPLGTSSDSDKIPFHPYYTIKDLLGLLLLILLTMMLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILAIIPILHTAKQRSMLFRPLSQCLFWTLTADLFILTWIGGQPVEYPFITIGQAASILYFTLILILMPMVSLIENKML---KW--------MF--------MLNLLLLIVPILLAMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPLPYPLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHTPETYTTSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYMSLPVLTSCI-P-PQM--MKP-IVLMPIMLTIFMGTTLTMISSHWLLMWIGLEINMLAIIPILMEKANPR-STEAATKYFLTQATASMLLMFTIVINAMYSGQW--GITNMCNQLISFSIILALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISIMLQIYPSINPNILLLI-TTLSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMMAILMYCPSMTMLNLLIYLMLTIAMFTMLNINTSTTTLAL---SNLWNKAPTMTITILISLLSLGGLPPLTGFLPKWIIAQELTKNNNIMLATTMTILALLNLYFYLRLIYSTSLTMFPTLNNLKMKW-QFQQTKQMFLL-------PPLIILTTLTLPLSPALLILN---MN-LPLALTTNIVLTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNPKLMLAVALILVSILAAGLAYEWLQKG--LEWVE-MPSISTNIILAFITALLGMLIFRSHLMSSLLCLEGMMLSMFILSTLTILNLHFTASFMMPILLLVFAACEAAVGLALLVTVSNTYGLDYIQNLNLLQCMLKIIIPTIMLFPVTWYSNKTMIWINTTSHSLLISLAGL-SFLNQFSDNSNNFS-LTFFSDPLSSPLVILTMWLLPLMIMASQYHLTKESWILKKLYLSMLISLQMFLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYIQNYMGSLNMLTMKFYLQEMP-NSW-----SNSILWMACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTILDP-LTKHMAYPFLMLCLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVVVGILIQTPWSFMGATILMVAHGLTSSMLFCLANSNYERIHSRTMLLARGIQALLPLMATWWLLASLTNLALPPSINLIGELFVTMASFSWSNITIILVGLNMLITALYSLYMLTITQRGKLTYHTYNLNPSLTRENTLMSMHMLPLLLLTLNPKIILGLTY------MNLLTSF-TLVTLMILTLPVIMN---IMNAYKD-YSFTLHVKSS-IACAFTTSLIPTALFISSGQEAIIFHWHWMTIQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLMYSNTWEFQQMFMLNHN-PSMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMESNQSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANLSNVNAWALTITLIATS-MTAIYSTRIIFYALLGQPRFTTSTPINENNPLLINSIKRLTLGSIFAGFFLTNNILPMNTPQMTMPLHLKLTALTVTIMGFALAMELNLMTKNLS--LKLPSHLFNFSNSLGYYPTTTHRLIPSHNLNLSQNTASLLLDLIWLEKAMPKNLSHLQMLSST--IISNQTGLIKFYFLS---FLMSL--LFTLLLFM----------------- +>Camelus_dromedarius_Arabian_camel +----MNENLFASFITPT-VMGLPIAILIIMFPSMLFPAPL-RLVNNRLISLQHWLIQLTSKQMMTIHNHKGQTWSLMLMSLIMFIGTTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLALMS-INMPTALITFIVLILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSML-VTLFVLFQLKISKHIYPS-DPSPK-SNKTRKQ-KAP-W-ETKWTKIYLP-LL-LPLQ----MFITRWLFSTNHKDIGTLYLLFGAWAGMVGMGLSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFMHWFPLFSGYTIDDTWAKIQFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSVGSFISLTAVVLMVFIVWEAFASKREVTTVELTATNLEWLHGCPPPYHTFEEPTYINL-K--------MPYPFQLGFQDATSPIMEELLYFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPVLTVKTIGHQWYWSYEYTDYETLSFDSYMIPTPDLKPGELRLLEVDNRVVLPMEMTIRMLVTSEDVLHSWAVPSLGLKTDAVPGRLNQITLMSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFEEWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSSILLVLGLVTNMLTMYQWWRDVVRESTFQGHHTPAVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRAHMLQALFITIALGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLTVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLLKIMNDAFIDLPAPSNISSWWNFGSLLGVCLIMQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLYIHVGRGLYYGSYTFSETWNVGIVLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVAVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGALLLMLALLILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAFIPALHTSKQRSMTFRPISQCLFWVLVADLLTLTWIGGQPVEPPFIMIGQVASILYFSLILILMPVAGIIENRIL---KW--------MF--------MVNILTLTIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAIKLFTKEPLRPATSSVTMFIIAPVLALTLALTMWIPLPMPHPLINMNLGVLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLITTQEHMWMIVPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFMAEYANIIMMNAFTTILFFGAFHNPYMPELYTVNFVAKTLLLTATFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPISTAGI-P-PQT--MNP-LILSVILLTIMTGTLIVMISSHWLFIWIGFEMNMLATIPILMKNFSPR-SIEASTKYFLTQATASMLLMLGVIINLLYSGQW--TTTKMFNQTSSIIVTTALTMKLGLAPFHFWVPEVTQGIPLVSGLILLTWQKLAPLSVLYQIAPSINPNMLLTM-SLLSIMVGGWGGLNQTQLRKIMAYSSIGHMGWMTAILVYNPTMTMLYLLMYLTMTLTMFMLLMINSTTTLLSL---SHTWNKTPITTMLVLTVMMSMGGLPPLSGFMPKWMVIQELTKNDSIILPTLMAMMALLNLYFYMRLAYSTALTMFPSSNNMKMKW-QFESTKRMTSL-------PVMIVLSTMILPLTPMLSVLY--MIN-LMLALLTNTTLASLLVLIAFWLPQLYTYAEKTGPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWATQTNYLYTMLTMALLLILLLAASLAYEWTQGG--LEWTE-MSMVYMNIILAFTMSLAGLLMYRSHLMSSLLCLEGMMLSLFVMASLMILNNHFTLASVMPIILLVFAACEAALGLALLVMVSNTYGTDYVQNLNLLQCMLKIIFPSIMLMPLTWLSKNSMVWINPTMYSLLISLISL-STLNQYSDNSTNFS-LLFFSDALSAPLLVLTTWLLPLMLIASQSHLSKEPLTRKKVYITMLILLQILLIMTFTASELIMFYVLFEATLVPTLIIITRWGSQAERLNAGSYFLFYTLSGSLPLLVALVYIQNTTGSLNFLIMQYWNQPLM-DSW-----SNALLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTTMLNP-LTEYMAYPFLMLSLWGMIMTS--SICLRQTDLKALIAYSSVSHMALVIVAILIQTPWSYMGATTLMVAHGLTSSMLFCLANTNYERTHSRTMILARGLQTLLPLMAMWWLLASLANLALPPTINLLGELFVVMSAFSWSNITIILMGANMMITALYSLYMLIMTQRGKHTHHINSIKPTYTRENSLMALHMLPLLMLSLNPKIIMGFTY------MNMFATF-TLLTLFMLTLPILMT---APNTY-N-NQYPVYVKNI-IACSFAVSLVPTMMFIHSNQEMVISNWHWITVHTLKISLSFKMDYFSMMFMPIALFVTWSIVEFSMWYMHSDPDINKFFKYLLLFLITMLVLVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFVASMAWFLSNLNTWELQQIFALTQN-CPTAPLIGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMESNKMAQTLTLCLGAITTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGIPFLTGFYSKDTIIEAANTSYTNAWALFTTLVATS-LTAVYSTRIIFYALLNQPRFPPLIMINENNPLLINSIKRLLVGSIFAGFFISYNIPPMTLPQMTMPLHLKLTALTVTILGFMLAMEINTMTQNLK--LTRPSKTFKFSNSLGFFPTIMHRLVPYLSLLTSQKSASMLLDLLWLEAALPKTIALIQVKAST--LVSDQKGLIKLYFLS---FLITL--ILIIILF----------NYPA---- +>Nasua_nasua_ring-tailed_coati +----MNENLFASFTTPT-LMGLPLVMLIIMAPSMLFPSPN-RLINNQLVSMQQWLVQLVLKQMLSTHNNKGQTWALMLTSLILFIGSTNLLGLLPYSFTPTTQLSMNLGMAIPLWAGTVVIGFRYKTKSSLAHFLPQGTPAPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLTLAN-ISTPVAMTTFITLILLTILEFAVALIQAYVFTLLVSLYLHDSTMPQLDTSTWFITIMSMI-LTLFLIFQLKLSKHNFSN-SPEPK-TMPLSKT-MIP-W-EKKWTKIYSP-PS-LPLR----MFVDRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGTLLGDDQVYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLNDVWAKVHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLAAVMLMTFMIWEAFASKREVMMVELTSTNVEWLHGCPPSYHTFEEPAYVLM-K--------MAYPFQTGLQDATSPIMEELLHFHDHTLMIVFLISTLILYIISSMLTTKLMHTNTTDAQEVETVWTVLPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGDLRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLTAVRPGLYYGQCSEICGSNHSFMPIVLELVPYSHFEEWSITLL----------MAHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSTTLLMLGLTTNMLTMYQWWRDVIRESTFQGHHTPIVQKGLRYGMALFIVSEVFFFAGFFWAFYHSSLAPTHELGGCWPPMGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEENRKHMLQALFATISLGVYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLSYHFTSDHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLTKMINNSFIDLPTPSNISSWWNFGSLLGICLILQMATGLFLAMHYTPDTTTAFSSITHICRDVNYGWIIRYMHTNGASMFFICLFLHVGRGMYYGSYAFSETWNIGIMLLFMVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFTFHFILPFIIASLAMIHLLFLHETGSNNPSGIPPNADKIPFHPYYTIKDTLGALAMIFILMMLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLTADLLTLTWIGGQPVEHPFITIGQLASILYFTIPLILLPTAGAIENNLL---KW--------MF--------MINIISLIIPILIAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAMKLFIKEPLQPLTSSTTMFITAPILALALALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLTITQERMWMIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHSPCMPEMYTVNFTIKTAFLTSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWYVALPIMTASI-P-PQT--MKP-QILIIIMFTVISSTMMVLMSSHWLTIWIGFEMNMLAMVPILMKKLNPR-TIEASTKYFLTQTTASMIMMLGIIINLLLTGQW--TMLNINNQITSDMMTIALSMKLGLSPFHFWVPEVTQGVSLTSGAILLTWQKIAPLSVLYQISPSINPDLLTTM-AMMSILIGGWGGLNQTQLRKILAYSSISHMGWMTSVTVYNPTLMMLNLAIYIFMTLATFMLFTYSTSTTTLSL---SHTWNKYPLITSLILVLMMSLGGLPPLSGFIPKWMIIQELTKNDMIIMPTLMSMATLLNLYFYMRLTYSTALTMFPSTNNIKMKW-QFENSKKPALL-------SPLIVTSTMLLPLTPMTSILY---MN-MILALLINTLLASLLALIAFFMPQLNIYAEKASPYECGFDPMKSARLPFSMKFFLVAITFLLFDLEIALLLPLPWACQTTNLKTMLIMALMLISLLAISLAYEWSEKG--LEWTK-MSMVYINISLAFALSFMGLLMYRSHLLSSLLCLEGMMLSLFVMMTITILNDHFTLSSMAPIILLVFAACEAALGLSLLAMISNTYGTDYVQNLNLLQCMLKIIIPTIMLIPLTWLSKPNMMWINTTMYSMLISLISL-TYLNQFTDNTLNLS-PLFFTDSLSAPLLVLTTWLLPLMLMASQFHLMKETPTRKKLYITMLITLQLLLIMTFTATELIMFYILFEATLLPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLIALLWAQNNLGTLNFLMAQYWIKPMS-TSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVTIMLNP-TTGFMAYPFMMLSLWGMIMTS--SMCLRQTDLKSLIAYSSVSHMALVIAAVLIQTPWSYAGATALMIAHGLTSSMLFCLANSNYERIHSRTMIIARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNFTIILMGTNIIITALYTLYMLITTQHGKPTYHIKNIKPSFTRENTLMALHMLPLLLLSLNPKIILGPIY---MKVINLFASS-TITTLLLLTMPIMAT---NTKIYKS-KSFPQYVKTS-VSYAFMTSLIPMTMFLHSGKEMIISNWHWITIQTLKLSLSFKLDYFSTIFVPTALLITWSIMEFSMWYMHSDPCINQFFKYLLMFLITMMILVTANNMFQLFVGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRVGDVGFILAMAWFLMNLNTWDLQQILMTNHN-NLNMPTMGLLLAAMGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLVRFHPLTEHNKMAQTATLCLGAMTTLFAALCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKLLPFTTTSLTIGNLALTGMPFLTGFYSKDLIIETASTSHTNAWALLITLIATS-MTAAYSTRILFFTLTGQPRFNPTITINENNPFLMNSIKRLLLGSIFAGYLITHYTTPNTMPQMTMPPYLKTTALTITILGLMLALELNNTTQNLK--LKYYSNMFKFSNLLGYYPTTAHRLVTKMNLYSSQKSATMLLDSMWLEKILPKSISRFQVKCSI--TVSSQKGLIKLYFLS---FMITL--IVSLIML----------NFHE---- +>Pteronotus_rubiginosus_ +----MNENLFASFITPT-MMGLPIVVLIIMFPTILFPSTN-RLINNRLVAIQQWLIHLTSKQMLSIHNRKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLSMAIPLWAGTVILGFRHKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMD-ISMTTAFITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNAMPQLDTSTWFITIVSTL-LTLFIIMQLKVSSHHYHS-TPEPT-LTKTTKL-STP-W-ETKWTKIYSL-LS-LPLR----MFVTRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNMTWAKIHFLVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFAAKREVSLVELTTTNLEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISSMLTTTLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPSMTIKTMGHQWYWSYEYTDYSDLCFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLFYGQCSEICGSNHSFMPIVLEVVPLEYFEKWSTSML----------MTHQAHAYHMVNPSPWPLTGALSALLLTSGLVMWFHYNSTLLLILGLITNTLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLDPLDVPLLNTSVLLASGVSITWAHHSLMEGNRKHTIQSLFITICLGLYFTFLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIINESLVDLPVPSSVSSWWNFGSLLAACLAVQILTGLFLAMHYTSDTATAFNSVTHICRDVSYGWVLRYLHANGASMFFICLYIHIGRGMYYGSYMYSETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFLLPFIIAALVVVHLLFLHETGSSNPTGIPSDPDMVPFHPYHTIKDILGILAMLTLLSMLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLAVIPLLHTSKQRTMMFRPISQCLFWLLVADLLTLTWIGGQPVEHPYIIIGQMASIMYFTIILVLMPATSMMENHLL---KW--------MF--------LINLLSMIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPHGLLQPIADAVKLFTKEPLRPLTSSITMFIIAPILALTLALTMWVPLPMPHPLINMNLSVLFMLAMSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLITTQEYMWLIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTTILFLGAYNNPIMPELYTTNFMVKTLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTVPIITAGI-P-PQT--MNP-IIFSMIMSTIILGTLIVMTSSHWLSVWMGFEMNMLAIIPILMKNHHPR-STEAATKYFLTQATASMLLMLAVIINLMYSGQW--STTKIFNPMASTIMTLALTMKLGLSPFHFWVPEVTQGVPLSAGLILLTWQKLAPLAVLYTIAPSINPELLITL-SMISVMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILTYNPTMTILNLIIYILMTTTMFMLLIHTSATTTLSL---SHMWNKTPLITTMILTVLLSLGGLPPLTGFMPKWMIIQELTKNESLILPTMMAITALLNLYFYMRLTYATSLTMFPTTNNTKIKW-HFETTKRTACL-------PPLIIISTMILPLTPMMAVLY---MN-MALTLLINTLLASLLVAIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTGNLKTMLPVALLLISILAISLAYEWSQKG--LEWSE-MSLTYMNMFLAFMISLTGLLMYRSHMMSSLLCLEGMMLSLFVMMSMTILSTHMTLASMLPIILLVFAACEAALGLSLLVMVSNTYGVDYVQNLNLLQCMLKIIMPTIMLIPLTWLSKPKLIWINTTAHSLMISLLCF-PLINQFSDNSLNFS-LMFFSDSLSTPLLMLTMWLLPLMIIASQFHLTNETPTRKKLYITMLTLLQVFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQAERLNAGLYFLFYTLVGSLPLLVALVYIQNSTGSLNFLLTQYWAKPMS-PSW-----ANTTLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITILLNP-ITNHMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSHMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTILPLMAAWWLLASLTNLALPPTINLIGELFVITSTFSWSNLSIILMGLNIILTALYSLYMLIMTQRGKHTHHINNITPSYTRENTLMAMHMLPLLLLSINPKIIMGTLY------MNMFSST-MLMSLIILTIPIMMT---ASNRHNH-PTYPNYVKTM-ISYSFMISIIPTMIFIYTGQEAVVTNWNWMTIQTMKISLSFKLDFFSMLFMPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFLTNSNTWELQQIFMLNTM-STNLPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNQTMQTATLCLGAMTTLFTAVCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKTMPFTTTALTVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALFITLIATS-LTAVYSTRIIFFALLSQPRFPTLVVINENNPLLMNSIKRLMIGSIFAGFLISNNIPPMTIPQMTMPLYLKLTALIVTLTGFALALELNTAALNLK--FNPPSHSTKFSTLLGYFPTIMHRLPPMTSLSMSQKSASLLLDLTWLEATLPKLIAHLQLKSST--LITNQKGMIKLYFLS---FLITL--TLATTMF----------NFHG---- +>Hippopotamus_amphibius_hippopotamus +----MNENLFASFITPT-ILGLPLVTLIIMFPSMLFPAPT-LLITNRLVSIQQWLIQLVSKQMMNIHNHKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVIMGFRNKTKISLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLALMN-ISMTTALITFIILVLLTALEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTILSMF-LTLFIIFQLKISKHTYHP-NPETT-LPMTQKQ-PTP-W-ETKWTKIYSP-LS-LPLQS---MFMNRWLFSTNHKDIGTLYLLFGAWAGMAGTGLSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVVLMVFIIWEAFVSKREVLAVDLTTTNLEWLNGCPPPYHTFEEPAYVNL-TS-------MAYPLQLGFQDAVSPIMEELLYFHDHTLMIVFLISSLVLYIITLMLTTKLTHTNTMNAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMVPTSDLKPGDLRLLEVDNRVVLPMDVTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLQTFEKWTASLL----------MTHQTHAYHMVNPSPWPLTGALSALLMSSGLTMWFHFNSLILLTTGLVTNILTMYQWWRDVIRESTFQGHHTPVVQKGLRYGMVLFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKQMLQALFITIALGVYFTLLQASEYHEASFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSDHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIINDAFVDLPAPSNISSWWNFGSLLGVCLILQILTGLFLAMHYTPDTLTAFSSVTHICRDVNYGWVIRYMHANGASIFFICLFTHVGRGLYYGSHTFLETWNIGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFVITALAIVHLLFLHETGSNNPTGIPSNADKIPFHPYYTIKDILGILLLMTTLLTLTLFAPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALALSILILALIPMLHTSKQRSLMFRPLSQCLFWALIADLLTLTWIGGQPVEHPFIIIGQVASILYFLLILVLMPVAGIIENKLL---KW--------MF--------IINTLMLVAPILLAMAFLTLVERKILGYMQLRKGPNIVGPYGLLQPFADAIKLFTKEPLRPSTSSVSMFIIAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEKLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFMAEYINIIMMNAFTTVLFLGTCYNPYLPELYTINFTIKTLLLTMSFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPIMTSSI-P-PQT--MNP-FVSVIIYTTIILGTMIVMTSSHWLLTWTGFEMNMLAIIPIMMKSPNPR-ATEASVKYFMTQATASMLLMLAVIINLLYSGQW--TVMKMLNPTASMIMTMALAMKLGLSPFHFWVPEVTQGVPLTAGLILLTWQKLAPLSILYQISPSINPNLILTM-SMLSILVGGWGGLNQTQLRKIMAYSSIAHMGWMAAILIYNPTMTILNLTIYLMTTFTMFTMFALNSTTTTLSL---SHTWNKTPIITTLMLTILLSMGGLPPLTGFVPKWMIIQEMTKNDSIILPTLMAIMALLNLYFYMRLTYSTTLTMFPSSNNMKMKW-QFEASKHKTLL-------PTMIILSTMLLPLTPMLVVLD---MN-LVMALLTNTALASLLVLIAFWLPQLNSYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEVALLLPLPWATQTTNLKTMLIMALTLISLLAISLAYEWTQKG--LEWTE-MSLVYMNIIMAFTTSLVGLLMYRSHLMSSLLCLEGMMLSLFIMATLIILNAHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQSLNLLQCMLKYIIPTIMLMPLTWMSKNSMIWTNTTAHSLLISLTSL-LLLNQFNDNSLNFS-PMFFSDPLSTPLLILTMWLLPLMLMASQSHLLKEPPTRKKLFITMLITLQTFLIMTFSAMELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALIYIQNITGSLNFLMLQYWTQAVS-NSW-----SNVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTILNP-LTEMMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLVGELLVIMSSFSWSNITIILMGTNIMITTLYSLYMLTTTQRGKYTHHINNITPSFTRENALMALHILPLLLLSLNPKIILGPLY------MNLFSST-TLTMLFVLTLPIMMT---NTNIYKS-DKYPTYVKNT-VSSAFLISLVPMIAFTNTGQEMIISNWHWITIQTLKLTLSFKADYFSIVFAPVALFVTWSIMEFSMWYMHSDPHINQFFKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAAIQAILYNRIGDVGFIMAMAWFLSNLNTWDMQQIFMINPT-HSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPMMENNNLMQTITMCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPFTTTTLIVGSMALTGVPFLTGFYSKDLIIEAANTSYSNAWALLITLVATS-LTAVYSTRIIFFALLGHPRFPTSTLIHENNPLLLNSLKRLMAGSIFAGFILSHNLPPMTTPLMTMPPYLKMTALAVTMLGFTLAFEITLNTQNLK--YKHPTNSFKFSTLLGYFPTIMHRLPPHLSLTASQKLASSLLDSAWLENILPKSMAHAQLKLST--LVSNQKGLMKMYF--------------SIIPY----------H------- +>Pteropus_scapulatus_little_red_flying_fox +----MNENLFSSFITPT-MMGLPIVTLIIMFPSMLFPSTN-RLVNNRLVAIQQWIIHLTSKQMMAIHNQTGQKWSLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVALGFRHKTKASLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMD-ISTMTALVTFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-LTLYIIMQLKISKHTYYQ-NPEPT-TTKSTKH-LTP-W-ENKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMVFMIWEAFASKREVSTVELTTTNLEWLHGCPPPYHTFEEPTYVNP-K--------MAYPSQLGFQDATSPIMEELLHFHDHALMIVFLISSLVLYLISVMLTTSLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPYLTVKTMGHQWYWSYEYTDYEDLTFDSYMVPTQDLKPGELRLLEVDNRVVLPMELTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLAMWFHFNTPSILLLGLLTNMLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFIGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKPMLHALLTTILLGAYFTLLQASEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLFVCFVRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLFKIINDSLIDLPAPSSISSWWNFGSLLGICLAIQILTGLFLAMHYTSDTTTAFQSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGLYYGSYIYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALVMVHLLFLHETGSNNPTGIPSDSDMIPFHPYYTIKDMLGALAMILVLMTLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIVMPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLLILVLMPITSIVENHLL---KW--------MF--------MINLLTVIVPILLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPMADALKLFIKEPLRPLTSSPSMFIIAPILALTLALTMWIPLPMPHPLINMNLAVLFMLAMSSLAVYSILWSGWASNSKYALIGAMRAVAQTISYEVTLAIILLSVLLLSGSFSLSTLIITQEHAWLLLSSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFMAEYANIIMMNTLTAILFMGAFHDPTMPELYTTNLITKTLLLTVFFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVAMPITMAGI-P-PQT--MNP-MIFAMIMMTVILGTTIVATSSHWLMVWIGFEMNMLAVIPILMKKYNPR-SMEASTKYFLTQATASMLLMLAVTVNLVYSGQW--SVTKPLNPTASTIMTLAMAMKLGLSPFHFWVPEVTQGISLPSGLILLTWQKLAPMSILYQISPTINLNLLMML-SILSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILMYNPTMTLLNLTIYILLTSTTFVMFMLTSTTTTLAL---SHTWNKMPLLTTAILLTMLSLGGLPPLSGFMPKWMIIQELTKNDSVIMPTVMAIMALLNLYFYMRLTYSTSLTMFPSTNNMKMKW-QFNHIKPTTYL-------SPLIIMSTLILPLSPMLALLE---MN-LMITLLTNTLLASLLVLIAFWMPQMNTYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNLMIMLIMSLTLISLLAISLAYEWFNKG--LEWAE-MALTYMNMALAFTVSLLGLLMYRSHLMSSLLCLEGMMLSLFVTMALTILNSNLVLASMIPIILLVFAACEAALGLSLLVMVSNTYGVDHVQNLNLLQCMLKIIMPTIMLIPLTWLSKNNMIWINTTAHSLVITLLSL-PLLNQFNDNSLNLS-LMYFSDSLSTPLLMLTMWLLPLMIIASQFHLTKETYTRKKLYITMLISLQIFLIMTFTATELILFYILFEATLVPTLIIITRWGAQTERLNAGLYFLFYTLVGSLPLLVALIYMQNIAGSLNILLTQYWSEPLT-NSW-----GNSFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTVLSP-TTSFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTVLPLMAAWWLLASLTNLALPPSINLIGELFVVMSTFSWSSISIILMGINIVITALYSLYMLIMTQRGKQTYHINNIPPSYTRENTLMAMHLLPLLLLSINPKIILGTLY------MNLFTSS-MLLSMLILMAPIASS---NSNFYFN-KSFPNYVKTM-VSYSFAMSLIPMVIFIQSGQETMLSNWHWMSIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFLVAMAWFLSNLNTWELQQIFALNPT-NTNLPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKTIQTAMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTVGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKTMPFTTTALITGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALMLTLIATS-LTAVYSTRIIYFALLGQPRFPTLILINENNPLLINPIKRLLMGSIFAGFIISNNIPPTTIPQMTMPMYLKMTALFVTLLGFTVALELNMATQNLK--LNKQSSSLKFSNLLGYFPTIMHRLQPLANLLMSQKVASMLLDMIWLESVLPKSISLFQAKTST--LISSQKGQIKLYFMS---FLVTL--ALSMIVT----------SHA----- +>Apodemus_chevrieri_Chevriers_field_mouse +----MNENLFASFIIPS-VMGLPIVITIIMFPSILFPSSE-RLISNRLHSFQHWLIKLIIKQMMLIHTPKGRTWTLMIVSLIMFIGSTHLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVLLGFRHKLKTSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVWLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISSM-ATLFILFQLKISSQSFPT-PPSPK-TFTAQET-KTP-W-ESKWTKIYLPLLS-FPQ-----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLLMIFMIWEAFASKREVLTVSYSSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISTLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAMILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTTDLKPGDLRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSASMI----------MTHQTHAYHMVNPSPWPLTGTFSALLLTSGLVMWFHYNSTVLLSLGLLANILTMYQWWWDIIREGTYQGHHTPIVQKGLRYGMILFIVSEVFLFAGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITILLGLYFTMLQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGTTFLMVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MMNIRKTHPLLKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGMYYGSYTFMETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGIFIMVMFLMTLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPLLHTSKQRSLMFRPITQTLYWILVANLLILTWIGGQPVEHPFVIIGQLASISYFSIILIFMPISGIIENNML---KWNS------MY--------FINILMFLIPILIAMAFLTLVERKILGYMQLRKGPNVVGPYGVLQPFADAMKLFIKEPMRPLTTSISLFIIAPTLSLTLALSLWIPLPMPHPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQMLIYTQEHMWLILPAWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTSIVFLGPIHMINHPELYSINFMTETLLLSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCTWHISLPIFMASV-P-PYI--MNP-ITIIIIYFTILIGPVITMSSSNLLLMWVGLELSLLAIIPLLIDKKNPR-STEAATKYFITQATASMIILLAIILNFKQLGLW--TFQQQTNSLLLNMTLIALSMKLGLAPFHFWLPEVTQGIQLHMGLILLTWQKIAPLSILFQFYHLLSPTIIMIL-AILSILTGAWGGLNQTQMRKIMAYSSIAHMGWMLAILPYNPTMTLLNLLIYIILTVPMFLMLMLNSSTTINSI---SLLWNKAPTTLVMIPLILLSLGGLPPLTGFLPKWAIIMELLKNNCLIITTMMAIMALLNLFFYTRLIYSTSLTMFPTNNNSKMLT-HHSNYKNNIIL-------PSLTIISTLILPLSPQLII-----MN-LVIIMFINIILSLILISVAFWLPQMNLYTEKANPYECGFDPSSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTTNTNVMMISALILVTILSLGLTYEWTQKG--LEWTE-MSSAFINLTLAFMLSLLGTLTFRSHLMSTLLCLEGMMLSLFIMTSLASLNSNSMASMPIPIAILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLTWLSKPKKTWINVTSYSFMISLISL-SILWQTDESSLNFS-TMFFSDPLSSPLIILTTWLLPLMLMASQNHLKKENSTYQKLYISMLVSLQILLVMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALIFIQNSMGTLNFTILSLTTNPLN-PLW-----SNNILWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGSYGMMRIAIILDP-LTKYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSFMGATMLMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMVFPLMATCWLVASLANLALPPSINLMGELFITMSLFSWSNFSIILMGINIIITGMYSMYMIITTQRGKLTSHMNNLQPSHTRELTLMVLHIIPLILLTIDPKLITGLTM------MNTITSF-IMAIFLILLSPILIS---STSLSKH-INFPMYAMLS-IKLSFFLSLLPLMMLFYHNTEYMITTWHWITINSIELTMSFKMDYFSTMFLSVALFVTWSIMQFSSWYMHSDPHINRFIKYLLLFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWFGRADANTAALQAILYNRIGDIGFILAMTWFCLNMNSWELQQILLT-NN-NNLIPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPMTSSNPSILTIMLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGNMMKTMPFTSSCLTIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALLITLIATS-MTAIYSMRIIYFVVMTKPRFPPLFSINEKDPNLINPIKRLAFGSILAGFFISYNIPPTNIQILTMPWYLKTTALLISILGFLLALELNNLTQNLS--MSKKNPYSSFSTSLGYFPSIIHRIIPNKTLNLSFKTSLNLLDLYWLEKSIPKSTSTMHSYMSK--LLTNQKGLVKLYFMS---FLLSI--LLTTTLFFI---------NLEMFQ- +>Apodemus_draco_South_China_field_mouse +----MNENLFASFITPS-VMGLPIVITIIMFPSILFPSSE-RLISNRLHSFQHWLIKLIIKQMMLIHTPKGRTWTLMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVLLGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITVLSTT-ITLFILMQLKISSQSFPT-PPSPK-TFTTQMT-KNP-W-ESKWTKIYLP-LL-LPPQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLDDMWAKTHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLIMVFMIWEAFASKREVLSVEHTSTNLEWLHGCPPPYHTFEEPTFVKV-K--------MAYPSQLGLQDASSPIMEELMNFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLCFDSYMVPTSELKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKNFENWSLSMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSTTLLSLGLLANTLTMYQWWRDIIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITILLGLYFTMLQASEYFETPFSISDGIYGSTFFMATGFHGLHVIIGTTFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLIKIVNHSFIDLPAPSNISSWWNFGSLLGICLIVQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGVYYGSYTFMETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGIFMMIMFLMTLVLFFPDMLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSLMFRPITQTLYWILVANLFILTWIGGQPVEYPFVIIGQLASISYFSIILILMPISGMIEDKML---KWNL------MY--------FINILTLLVPILIAMAFLTLVERKILGYMQLRKGPNVVGPYGVLQPFADAMKLFIKEPMRPLTTSISLFIIAPTLSLTLALSLWIPLPMPHPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLLGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQTLIYTQEHMWLLLPAWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTSIIFLGPIFTINFPELYSLNFMTETLILSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCTWHISLPIFMASI-P-PYM--MNP-ITLTIIYFTIFLGPIITMLSTNLLLMWVGLEFSLLAIIPLLINKKNPR-STEAATKYFVTQATASMIILLAIVLNYKQLGLW--AFQQQTNFIFINMTLIALSMKLGLAPFHFWLPEVTQGIQLHTGLLLLTWQKIAPLSILFQIYNLLDHTMIMIL-AISSILIGAWGGLNQTQMRKIMAYSSIAHMGWMMAILPYNPTMTLLNLMIYIVLTIPMFIMLMLNSSTTINSI---SLLWNKTPTMLTMIPLILLSLGGLPPLTGFLPKWTIMTELLKNNCLILTTLMAMMALLNLFFYTRLIYSSTLTMFPTNNNSKMLT-HHTNYKHNIIL-------PSLTVISTLMLPLSPQLII-----MN-LMIILLINITLSLILISVAFWLPQMNLYSEKANPYECGFDPSSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTTKITMMMSSAMILVTILSLGLTYEWTQKG--LEWTE-MSSTFINLTLAFTFSLLGTLMFRSHLMSTLLCLEGMMLSLFIMTSVASLNSNSMTSMPIPITILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIIIPSIMLLPLTWLSKSKKTWTNVTSYSFLISLISL-SILWQTDENTLNFS-TMFSSDPLSTPLIILTTWLLPLMLMASQNHLKKEKLTFQKLYISMLVSLQILLVMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALIYIQNSMGTLNFNMMLLTTNTLN-SLW-----SNNILWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGSYGMMRIAIILDP-LTKNMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSYMGATMLMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMVFPLMATWWLVASLANLALPPSINLIGELFITMSLFSWSNFSIILMGINIIITGMYSMYMIITTQRGKLTSHMNNLQPSHTRELALMILHIIPLILLTMNPKFITGLTM------MNSITSS-ILAIFFTLMSPILIN---STSLSKY-INFPSYATLS-IKLSFFLSLLPLMLLFHHNAEYMISTWHWMTINSIELSVSFKMDYFSIMFMSVALFVTWSIMQFSSWYMHSDPHIDRFIKYLLLFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWFGRADANTAALQAILYNRIGDIGFILTMTWFCLNSNSWELQQILST-NN-NDLIPLIGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPMTSSNPQILTMMLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGNMMKTMPFTSSCLTIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALLITLIATS-MTAVYSMRIIYFVVMTKPRFPPMISINENNPNLINPIKRLAFGSILAGFFISYNIPPTNVPILTMPWYLKTTALLISILGFLLALELNNLTLNLS--MNKKKPYSSFSTSLGYFPLIVHRLIPNKMLNMSFKTSLNLLDLYWLEKSIPKSTSTIHSYVST--LLTSQKGLVKLYFMS---FLLSI--SLMATLYIV---------NLEWSQ- +>Neotragus_moschatus_suni +----MNENLFASFITPM-ILGLPLVILIVMFPSLLFPTSN-RLMNNRLISLQQWMLQLVSKQMMSIHNPKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKPKVSLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTAFITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKISKHNFYH-NPELT-STKMLKH-NTP-W-EKKWTKIYLP-LS-LPL-----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIQFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPVYINL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSVILLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGISPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLVLQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFVTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGAILLILVLTLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPMLHTSKQRSMMFRPISQCLFWVLVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPVAGSIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSVSMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLITTQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPILLSSI-P-PQT--MNP-IIFIIILMTIMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLDLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILLYNPTMTLLNLTIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKAPIMTILALITLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTLMAITALLNLYFYVRLTYSTALTMFPSTNNMKMKW-QFSTTKKMTLL-------PTMVVLSTMLLPLTPILSVLE---MN-LMLALLTNCTLATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAAQTTNLYTMLTMALFLIFLLAASLAYEWTQKG--LEWTE-MSIVFLNIMVAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNTHFTLASMMPIILLVFAACEAALGLSLLVTVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINPTMYSLLISLTSL-LLMNQFCDNSLNFS-PTFFSDSLSMPLLILTMWLLPLMLMASQHHLLKESLIRKKLFITMLILLQLFLIMTFTAMELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYIQNTVGSLNFLILQYWVQPMS-NSW-----SNAFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-MTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTYHINNISPSFTRENALMLLHMLPLLLLSLNPKVILGSLY------MNMFSSL-TLTTLSLLMVPIMMT---SSKTYKT-SNYPLYVKTT-ISCAFIISMIPTMMFINTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFILNPN-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLIQSLMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTSALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLLTLIATS-FTAIYSTRILFFALLGQPRFPTLIIINENNPLLINSIKRLLVGSLFAGFFISNNIPPMTIPQMTMPHYLKLTALAVTILGFILALEMSNMTYYLK--FKYPSNAFKFSNMLGYYPTIMHRLTPYMNLTMSQKSASSLLDMIWLENILPKTTALIQMQAST--MVTSQKGLIKLYFLS---FLVTI--LISMILF----------NFHE---- +>Theropithecus_gelada_gelada +----MNENLFTPFSTPT-ILGQSATIPITMFPTLLIPTSK-HLINNQLVTIQQNLTKLTLKQMMAPHNAKGQSWSLMLMSLITFITMTNLLGLLPYSFTPTTQLSMNLAMAIPLWTGTIITGLRFKTKNSLAHILPQGTPTPLIPMLVMIETISLLIQPMALAVRLTANITAGHLLIHLIGNTVLTLST-VSLSTTLLISMLLALLTILEVAVALIQAYVFTLLVSLYLHNNTMPQLDTSTWFITIMSML-PTLYLITQLKLLSTNYYQ-PPSQK-NPNLQAH-NMY-W-QPKWTKIYLP-HS-QPQQS---MLINRWLFSTNHKDIGTLYLLFGAWAGVMGMALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTVVEAGAGTGWTVYPPLSGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLNQTYAKAHFIVTFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGSFISLTATILMIYMIWEAFASKRKVLLTEQPSTSLEWLNGCPPPHHTFEEPAYIKL-S--------MAHPVQLGLQDATSPVMEELVTFHDHALMAMFLISFLILYALSATLTTKLTNTNITDAQEMETIWTILPAVILVLIALPSLRILYMTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQLHAYHMVKPSPWPLTGALSAFLLTSGLIMWFHFYSITLLTLGLLTNALTMYQWWRDIIRESTYQGHHTVPVQKGLRYGMALFIISEVFFFAGFFWAFYHSSLAPTPHLGCHWPPTGITPLNPLEVPLLNTSVLLASGITITWAHHSLMTNSRKQTIQALLITILLGIYFTLLQISEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLLICFIRQLLYHFTSSHHFGFEAAAWYWHFVDVIWLFLYISIYWWGS--MTPVRKSNPIMKMINHSFIDLPTPSNISIWWNFGSLLATCLVLQIITGLFLAMHYSPDTSSAFSSIAHIIRDVNYGWTIRYLHANGASMLFICLFLHVGRGLYYGSYLLLQTWNIGIMLLLMTMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTNLVQWVWGGPAIDNPTLMRFFTLHFTLPFGIVALTTVHLLFLHETGSNNPCGISSDPDKITFHPYYTIKDILGLILLLFALMMLTLLSPDLLSDPDNYIPADPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALFLSILILAVIPMLHKSKQQSMMFRPLSQSLFWLLVTTLLTLTWIGSQPVIQPFITIGQVASVLYFTTILILMPLAAQIENNLL---K---------MT--------TMNLLLLIMPTLAAMAFLTLVERKLLGCMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSSTILYITAPTLAFSIALLLWTPLPMPNPLINFNLGLLFILAMSSLTVYSILWSGWASNSNYALIGALRAVAQMISYEVTLTIILLSVLLTSGSFNLNMLITTQEHLWLILPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYSAGPFALFFMAEYMNIIMMNALTTTIFLGTSYPVHSPELFTTCFTIKTLLLTSLFLWIRAAYPRFRYDQLMHLLWKNFLPLTLALLMWSTSMPIAISSI-P-PQT--MNP-LAQLIIYTTVITGTLITMLSSHWFLTWTGLEMNMLAFIPTLIKKTNPR-STEAATKYFLTQSTASMILMMAIISNNLLSGYW--TMTNYTDQFPPLMMTIALTMKLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQIHPSTNTYILLTL-STLSIAVGSWGGLNQTQLRKILGYSSITHTGWMTMTLAYNPTITTLYLTIYITLTTTMFLTLNLNSSTTTLML---SNTWNKSAYLMPLMTSTLLSLGGLPPLTGFLPKWITIQELTMNNNFIIPTIMIAMTLLNLYFYMRLVYAISLTLLPTPNNTKMTW-QLENTKPTLLI-------PALTTISTLLLPISPLILSIP---MN-LMLALMINTLLTSLLTIIMFWLPQLNSYAEKTDPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWALQTTNLSTMIKTSIMFITILILSLAYEWTQKG--LDWTE-MTPTYMNIMLAFTISLLGMLIYRSHLMASLLCLEGMMMSLFIMTALMASNAHSPLINIMPIIMLVFAACEAAVGLALLISISNTYGLDHINNLSLLQCMLKMIIPTTMLLPTTWLSKNNTIWINLTTHSLTISLIPL-LFFNQTDNNLLNHS-TYLSSDPLTTPLLMLTAWLLPLMIMASQYHLCNEPPSQKKLYLSMMIFLQITLILTFMATELIMFYILFETTLIPTLIIITKWGNQAERLNAGTYFLFYTLTGSLPLLIMLMYTHNKTGSLNITLLTLTDQKLT-TTW-----SHNLTWLACMMAFMTKLPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVASLIQTPWSFSGATILMIAHGLTSSMYFCLANSNYERTHSRIMLLSRGLQILLPLMTFWWFMANLTNLALPPTINLIGELFVITASFSWSKITMILMGLNMLITALYSLHMFVTMQRGALTHHMINMKPPFTRENTLMFMHLAPTILLSLNPNTILGLTA------MTMCTSI-MMMTLTSLTFPIFAT---FINPNKT-HSYPNYVKTT-MMYTFITSLIPTTLYIFSNQETTIWSWHWMMTQTLDLTLSFKLDYFSMMFIPIALFITWSIMEFSLWYMSSDPNINQFFKYLLTFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWHARTDANTAAIQAVLYNRIGDIGLILAMAWFLLHYNSWDFQQMLALNPS-PSSLPLMGLLLAAVGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNMLIQNLTLCLGAITTLFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLVIGNLALTGMPFLTGFYSKDLIIEATNTSYTNAWALSITLIATS-LTSAYSTRTILLTLTGQPRFPALTNINENNPALLNPIKRLAMASMIVGFLITNNIPPTSLPQPAMPPYLKLSALYMTTLGFITALDLTLMANKLK--VKTPSRTFKFSNMLGYFPTTTHRTIPYQNLLMSQNLALLLLDSMWLEKSMPKAISQTHITIST--TATTQKGMIKLYFLS---FLIPL--TLTLLLMM----------------- +>Crocidura_russula_white-toothed_shrew +----MNENLFASFATPT-MMGLPIVVLIILFPSVMFPTPN-RLITNRLTALQQWMIQLTSKQMMTIHNQKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLSN-ISPTTALITFIILMMLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISML-LTLFITFQLKISKFIYPN-TPEPK-SLKALKQ-NTP-W-ETKWTKIYSP-LS-LPPQ----MFMTRWLFSTNHKDIGTLYMVFGAWAGMAGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFIMIFFMVMPVMMGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGSINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIAGFVHWFPLFTGYSLSSTWAKIHFAIMFIGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVIVMVFMIWEAFASKREVSSIELTTTNIEWMYGCPPPYHTFEEPVYINA-K--------MAYPFQMGLQDATSPIMEELMNFHDHALMIVFLISSLVLYVISAMLTTKLTHTSTMDAQAVETIWTILPAIILVMIALPSLRILYMMDEINNPTLTIKTVGHQWYWSYEYTDYDELNFDSYMIPTTELKPGDLRLLEVDNRAVLPMEMTIRVLVTSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICGSNHSFMPIVLELVPLSIFEKWSSSMI----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSTNLVMMGLLGNMLTMYQWWRDVIREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHELGGYWPPAGIKPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQALLITIALGLYFTLLQAAEYYEAPFTISDGIYGSTFFMSTGFHGFHVIIGSTFLVICLLRQLQFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINSSFIDLPAPSNISSWWNFGSLLGICLIAQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMFLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIVAALAGVHLLFLHETGSNNPSGLNSDTDKIPFHPYYTIKDILGALIMITMLSSLVLFSPDMLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLAVIPLLHTAKQRSMMFRPMSQCMFWILVADLFTLTWIGGQPVEHPFVVIGQLASVVYFLLILLIMPVTSMIENRL--------------MF--------MINLLILIVPVLLAVAFLTLVERKVLXYMQMRKGPNIVGPYGLLQPIADAVKLFIKEPLRPLTSSASMFIMAPILALTLALTMWLPLPMPYPLINMNLGVLFLLAVSSLSVYSILWSGWSSNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSYSLGNLIITQEHMWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFLGTFHNPYWPELYSINFMMKALLLTSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVALPIFTSSI-P-PQL--MNP-MIFIILLGTIMLGTSIVMTSSHWFMTWLGFEMNMMAIVPVLMKKYSPR-SMEAATKYFLTQATASMMLMLAIIINLMYSGQW--TITNMENYMASMLVTIALVMKLGLAPFHFWVPEVTQGVPLTSGLILLTWQKIAPLSLLYQIHPSVNTNLLLTM-SLLSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMMAIMIYNPNLSLLNLFLYILMTSSMFMLLIFTSTTSTLSL---SLTWNKAPIITTMSLTTLLSLGGLPPLTGFMPKWMIIQELTKNNSVILPTLMAILALLNLFFYMRLTYSTTLTMFPTMNNMKLTW-QFQNTNILPMM-------LPLITTSTLTLPLTPLFILLN---MN-LLLALMTNISLASLLVMIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWASQTNSLNMMTIMALALIFLLAMSLAYEWLHEG--LEWTE-MSLVYMNTALAFSISMLGLLMYRAHLMSSLLCLEGMMLSLFTLGAITILTTHFTLANMLPIVLLVFAACEAAVGLSLLVMVSNTYGADFVQNLNLLQCMLKLIIPSIMMIPLTWLSDKKNIWINPTLYALLIALVTL-NLFNQPDNNAYHFS-TTFYSDSLSAPLLALTTWLLPLMIMASQNHLMNETETRKKTYITMLILLQIFLIMTFSATELILFYILFEATLVPTLILITRWGNQTERLNAGLYFLFYTLIGSLPLLVALVYIQNFLGTLNMPITHIWTQNIM-NSW-----SNDFLWLACMMAFLVKMPLYGLHLWLPKAHVEAPVAGSMVLAAVLLKLGSYGMMRITTLLDP-LTESMLFPFLTLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTLLPIMAAWWLLGSLANLALPPTINLIGELFVIISSFSWSYITMLLTGLNVVITALYSLYMLIMTQRGKYTQHIQMINPSFTRENALMALHMLPLLLLTLNPQLILGPTF------MNYFSTF-MLITLLVLTLPVVMT---FLPIYKS-NKYPYYVKTI-TSYAFFTSLIPALLFINSGHEAIISNWHWMTLQTMKLTLSFKLDYFSLLFVPVALYVTWSIMEFSIWYMHSDPNINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFILAMAWFLTYSNSWELHQIFMTNTN-YNNLPLFGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLIIRFYPLVENNDLAKTLILSSGALTTLFAAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKIMPFTTTSLIIGSLALTGTPFLTGFYSKDLIIETANTSYTNAWALLITLIATT-LTAVYSTRILYYALLGQPRFNSLILINENQPLLINPIKRLLIGSIFAGFLISLNLPPMTTPQMTMPAYLKLTALLITLTGFILALELSMATQNLK--LPPIQNYFNFSNMLGYFPITIHRLIPLTSLLMSQTLASMVLDLTWTEMSLPKLISNIQKIYST--AVSSQKGLIKSYFLS---FTITL--LISLTIL----------NFPV---- +>Felis_catus_domestic_cat +----MNENLFASFTTPT-MMGLPIVILIIMFPSILFPSPN-RLINNRLVSLQQWLVQLTSKQMLAIHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPVPLIPMLVVIETISLFIQPMALAVRLTANITAGHLLMHLIGGAALALMN-ISTSIALITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSITIMSMI-MTLFIVFQLKISKYLYPS-NPEPK-SMTTLKQ-RNP-W-EKKWTKIYSP-LS-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFMVWEAFASKREVAMVELTTTNLEWLHGCPPPYHTFEEPTYVLL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMATRPGLYYGQCSEICGSNHSFMPIVLELVPLTYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHYNLTLLLTLGMTTNLLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLKYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPAPSNISAWWNFGSLLGVCLTLQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYMHVGRGMYYGSYTFSETWNIGIMLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTELVEWIWGGFSVDKATLTRFFGFHFILPFIISALAGVHLLFLHETGSNNPSGITSDSDKIPFHPYYTIKDILGLLVLVLTLMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLAIIPILHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFSTLLILMPISGIIENRLL---KW--------MF--------MINVLSLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSMLMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLAMLITTQEYMWLIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFDVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHSPYMPELYTINFTVKTLLLTTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIITASI-P-PQT--MNP-PIFIIIMLTVISGTMIVVTTSHWLLVWIGFEMNLLAIIPILMKKYNPR-AMEAATKYFLTQAAASMILMMWIIINLLHSGQW--TVLKDLNPMASIMMTTALAMKLGLAPFHFWVPEVTQGISMSSGLILLTWQKIAPLSILYQISSTINPNLILTM-SILSVMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMMYSPTMMILNLTIYIIMTLTTFMLFMHNSTTTTASL---SQTWNKTPLITSLILVLMMSLGGLPPLSGFIPKWMIIQELTKNELIMMPTLLAMTALLNLYFYMRLTYTTALTMFPSNNSMKMKW-RFECTKKMTFL-------PPLVVMSTMLLPLAPMLSILD---MN-VMLALLTNTLLSTLLVLIAFWLPQLNIYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDKLPTMLTMALLLISLLAASLAYEWTQKG--LEWTE-MSMVYINIFLAFIMSLMGLLMYRSHLMSSLLCLEGMMLSLFIMMAVAILNNHLTLASMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTAMLMPMTCLSKPNMIWINSTTYSLLISLISL-SYLNQLGGHSLNFS-LLFFSDSLSAPLLVLTTWLLPLMLMASQSHLSKETPSRKKLYITMLTLLQLLLIMTFTATELIMFYILFEATLIPTLIIITRWGDQTERLNAGLYFLFYTLVGSLPLLVALLYIQNTTGTLNFLIIQYWAKPIS-TTW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITVLLNP-ATNQMAYPFMMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTILPLMAAWWLLASLANLALPPTINLIGELFVVMASFSWSNMTIILMGTNIIITALYSLYMLIMTQRGKYTHHIKNINPSFTRENALMALHLLPLLLLSLNPKIVLGPIY------MNLFTPL-MLTAMFILLLPIIMS---NTQLYKN-SLYPHYVKTT-ISYAFIISMIPTMMFISSGQEAIISNWHWLSIQTLKLSLSFKMDYFSTIFIPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFIMAMAWFLTNSNAWDFQQIFITQHE-NLNIPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEQNKTMQTLTLCLGAITTLFTAICALTQNDIKKVVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKPMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-LTAAYSTRIMFFVLLGQPRFNTLNLINENNTHLINSIKRLLIGSIFAGYLISYNIPPTTIPQMTMPYYLKLTALAVTIAGFILALELNLAAKNLK--FMYPSNLFKFSNLLGYFPIVMHRLPSKMSLTMSQKSASMLLDMIWLENVLPKSISLFQMKMST--TVSNQKGLVKLYFLS---FMITL--ALSLILL----------NSHE---- +>Manis_pentadactyla_Chinese_pangolin +----MNENLFTSFITPV-MMGIPIVTIIIMFPVILFPTSN-RLINNRIVSMQQWLLKQTSKQMMSIHNYKGQTWTLMLMTLIIFIASTNLLGLLPHSFTPTAQLSMNLSMAVPLWAATVVTGFRHNTKTSLAHFLPQGTPTPLIPVLVIIETISLLIQPMALAVRLTANITAGHLLMHLIGSATLALMS-INPTVATTTFIVLVLLTILEFAVALIQAYVFTLLISLYLHDNTMPQLDTTTWSITIMSMI-LTLFVLFQLKISKHYYPH-DAETS-TKAHHKT-LTP-W-EKKWTKIYSP-LS-LPQ-----MFTNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVKAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMNQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNVKWAPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKVHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMLMAFMIWEAFASKREVLMVESTNTNLEWLHGCPPPYHTFEEPAFVNL-VKT------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTQDLKPGELRLLEVDNRLVLPMDTTIRMLISSEDVLHSWAIPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKTFENWTTSLL----------MTHQTHSYHMVNPSPWPLTGALSALLMTSDLAMWFHFNSTMLLLLGLTTNLLTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGSRNHMTQALLITILLGIYFTLLQVSEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGTSFLTVCLLRQLKYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIINNSFIDLPTPSNISAWWNFGSLLGICLVLQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASLFFICLFAHIGRGIYYGSFAYKETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAMPYIGSSLVEWVWGGFSVDKATLTRFFALHFILPFVILALVLVHLLFLHETGSNNPMGIVSNPDVIPFHPYYTAKDTLGLFIMLTALMSLALFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILVLALIPLLHTSKQRTMMFRPLSQTIFWLLVADLLVLTWIGGQPVEHPFILIGQVASILYFTLILAAMPIAGIIENNLM---K---------MY--------TINMMMMIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPWGLLQPIADAVKLFTKEPLRPLTSSITMFIMAPILALTLALTMWVPLPMPHPLVNMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMSGSFTLSTLITTQEKLWLLVPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILSVTLFMGAFHDPHTPSLYTVNFVVKTLALTALFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPIALSSI-P-PQS--MN--LTMLAILTTLFLGTMLVLISSHWLMIWIGFEMNMLAMVPILMKNFSPR-AMEAATKYFLIQATASMLLMLAITLDLMSSGQW--TITKTHNTLPSAIITVSMAMKLGMAPFHFWVPEVTQGSPLSSGMLLLTWQKVAPMSILYQMTPTINTDMLTTM-AALSILIGGWGGLNQTQLRKIMAYSSIAHMDWMAIIMTYNPDIAILNLLVYIMMTLSMFAILLYNSSTTTLSL---SHLSNKTPLITALALLILLSLGGLPPLTGFMPKWMIIQELTKNNMVMMPTVMAMTALLNLYFYVRLAYSTALTMLPTTNNMKMKW-QFETTKIMKLT-------PPLIILSTMALPLTPMMSILN---MN-LLLAMTTNTMLACLLMLIAFWLPQLNTYSEKITPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWASQTNNLGTMITVALALILLLAISLTYEWTQKG--LEWTE-MSLIYINTTLAFTISLMGMLMYRSHLMSSLLCLEGMMLSLFVMITITILTNHFTLANMAPIILLVLAACEAALGLSLLVLVSNTYGTDYVQNLNLLQCMLKLIVPTAMLIPLTWLSNKNMVWINVTSHSMLISLTSL-GILGQHDHNNMSLS-AIFFSDPLSAPLIVLTTWLLPLMLTASQAHLSNEPLGLKKLYITMLITLQALLIMTFASSEFIMFYILFEATLVPTLIIITRWGNQAERLNAGSYFLFYTMVGSLPLLVVLTYTQNMTGTLNMLVLQYWAKPMN-DSW-----SNMLMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITIMLEP-MTTFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANTNYERTHSRTMMLARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVVSTFSWSNTTIILTGTNIIITATYSLYMLMSTQRGKYTHHINNICPSFTRENALMALHMLPLLMLSTNPKIILGCLY------MNTLTCT-SLMTLTTLIMPIMIT---PTNAYTS-KNYPHHVKNM-VALAFAVSMIPAMAFIYSNEEMTIFNWHWTTIQTMKMTMSFKLDYFSTTFMPVALFVTWSIMEFSLWYMKSDPHINRFFKYQLIFLITMMILVSANNMFQLFIGWEGVGIMSFLLIGWWHGRTDANTAAMQAILYNRIGDIGLILSMAWFLTNLNSWDLQQILMLNPE-NTNIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTTTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFMHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFHALPTTTSALIIGSLALTGTPFLTGFYSKDLIIETANMSHTNAWALLITLVATS-LTAAYSTRIIFFTLLGQPRSNTLININENNPSLTNPIKRLMLGSIFAGFLLYNNIPPTTMPQTTMPQYLKYTALATTILGLIMALELCNLSLNLS--HKPPSSAFKFSTLLGYFPTIIHRSGPLWSLTTSQKLASLILDLIWLENIMPKSISHFHMKASL--MTSNQKGSIKLYFLS---FAVTM--ILALLMF----------YSPE---- +>Callicebus_cupreus_coppery_titi +----MNQNLFASFNIPT-ILGIPLITLIILFPTLLMTPPN-KLIGNRISLLQQWLIQLTLKQLMLNHSTKGRTWSLMLLTLITFIALNNLLGLMPYAFTPTTQLSMNIGMAIPLWAATVLMGFRFKTKASLAHFLPQGTPISLIPMLVIIETISLFIQPMALAVRLTANITAGHLLVHLLGDTALTLMS-IYFSSSMITVIVIILLITLELGVALIQAYVFTLLVSLYLHDNSMPQLDISPWPLVIMSMV-VALFYTIQLKMLNFTFYA-SPMSK-LIKMQKH-NAT-W-ELKWTKIYLP-HS-MSQQF---MFMNRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRAELGQPGSLMEDDHVYNVIVTSHAFIMILFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSVGSFISLTAVILMIFMIWEAFSSKRKVMTVEQLSSNLEWLYGCPPPYHTFEEATYVKILNEKG-----MAHPAQLGLQNAASPIMEELIAFHDHALMIIFLISSLVLYIISLMLTTKLTHTSTMNAQEIEIIWTILPAIILIMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYEDLAFDSYIMPTYFLEPGEFRLLEVDNRTTLPMEADIRMLISSQDVLHSWAVPSLGVKADAIPGRLNQAMVASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWAS-------------MTHQAHAYHMVNPSPWPLTGALSAFLLTSGLIMWFHFYHSLLLMTGLLASAMTMFQWWRDVVREGTYQGHHTTPVQKGLRYGMILFIISEIFFFAGFFWAFYHSSLAPTPQTGGHWPPTGIFPLNPMEVPLLNTAVLLASGVTITWAHHSLMEADQEESTQALFMTIALGMYFTYLQMSEYSEAPFTISDGIYGSTFFMATGFHGLHVIIGTTFLITCYLRLQMDHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTITRKTHPLAKIINNSFIDLPTPSNISSWWNFGSLLGICLITQIATGLFLAMHYTPDTSSAFSSVAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYYGSFLFLKTWNVGIILLLASMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFTFHFILPFIIAALAAIHLLFLHDTGSNNPSGLVSSSDKIVFHPYYTIKDILGLIFLLLLLMSLTLFAPDLLTDPDNYTLANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIIPMIHLSKQQSMMFRPIGQSLFWTLVAILLTLTWIGGQPVEYPFVTIGQMASIMYFLTIITLIPLSSLIENKLL---KW------------------MINLLLLIIPALIAMAFLTLTERKILGYMQFRKGPNIVGPYGVLQPIADAMKLFTKEPLLPTASTTTLYVIAPTLALSIALLLWVPLPMPLPLINFNLGLLFMLAISSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAIILLSVLLMSGSFNLHSLITTQEHLWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFLAAPHTLLTPELYTANFMTKTLLLTALFLWIRTAYPRFRYDQLMHLLWKKFLPLTLALCMWYISMPIFTSAV-P-PQM--MNP-LAQLIIFFTILTGTMITMLSSHWFLIWVGMELNMLAIVPVLAKTTNPR-STEAATKYFLVQATASMLLLMTILMNNLFSGQW--TINPPTNQFLATTMLIALTMKLGMAPLHFWLPEVTQGIPLIPAMIILTWQKLAPISIMFQIFPSINMNILMTI-SMMSIMIGSWGGLNQTQLRKIMAYSSITHMGWMMAVLHYNPSITILSLLIYLFLTITIFMTFYLNSNTTTLSM---SHTWNKFTWAMPVIPLMMLSLGGLPPLTGFSPKWIIMQEFTNNSNLIIPLTMAMLTLVNLYFYLRLTYSISVTMFPTSNNAKINW-QLKSTKPTPLL-------TPLMISSTLLLPLTPLMLMT----MN-MALTLITSIILALLLITITFWIPQPNAYAEKHNPYECGFDPTTSAHLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNKLMLTTNMILALIIILVVGLAYEWSQKG--LDWVE-MPFIYINTMLAYSMSLLGLLIYRSHLMSSLLCLEGMMLSLFILITLTTLNLHMTLMFMMPITLLVFAACEAAVGLALLILISNLYGLDYVQNLNLLQCMLKIILPTIMLLPTVWLSNNRTMWINTMAWSLLISALAL-VPLYLPN-MLCYLS-LIFFSDPLTSPLLALTAWLLPLMILATQQHLYNNPLPRKKLYMSMLILLQISLIMTFTATELILFYILFETTLIPTLIVITRWGYQPERLNAGSYFLFYTLAGSLPLLITLLYYLANLGSLNLLTMLFTTKEML-LSW-----TNSITWLGCMLAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGSYGMMRITPMLNP-LTEKMSYPFIILSLWGMVMTS--SICLRQADLKSLIAYSSVSHMALVILAILIQTPWSFTGAIILMIAHGLTSSLLFCLANSNYERIHSRTMMFTRGLQTLFPLLALWWLMANLTNLALPPTINLMGELLTIVASFSWSNFTIVFTGLNMLITALYSLHMFTSTQRGPLTYSTSNFKPLFTRENTLMLMHLGPIILLTLNPKVIMGLTP--------MFSSM-ALMMLVPLLVPIMIT---LINPRNN-PLYPHYVKLA-IVFSLSISLLATTMFIFTGQEFMISNWHWTTIQTIELFLSFKMDFFSMVFTPVALLVTWSIIEFSMWYMHSDPNINQFLKYLLIFLITMIILITANNLFQLFIGWEGMGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFILAMAWFFLYANSWDFQQMFIINST-PSSLPLISLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLIIRLHPLFENNLLLQTLMLTLGAMTTLFTAICALTQNDMKKIIAFSTSSQLG--LMMVTVGLNQPFLAFLHICTHAFFKAMLFLSAGSIIHSLNNEQDIRKMGGLFYTLPFTTSSLIIGNLALMGTPFLTGFYSKDLIIEAANMSYANAWALMITLMATS-LTAAYSIRMIFFTLTNYPRSTSLILINENSPLLMNPINRLAIGSIFAGFLISNCIPPTHHPQTTMPLYLKLAALGVTILGLLLAMELSLMTNNTK--LKTPVKTYYFSNMLGFYSTTTHRLSPHSGLTSSQNLMSMLLDLLWLEKTMPKMMSMTQVSIST--STSTQKGLIKLYFLS---FFIPP--TLMLLLAI----------------- +>Eothenomys_chinensis_Sichuan_red-backed_vole +----MNENLFASFITPT-VMGLPIVILIIMLPSMLLTPSK-RLISNRFHSLQQWLVKLIIKQMMLIHSPKGRTWSLMLVSLIMFIGSTNLLGLLPHTFTPTTQLSTNLGMAIPLWAGAVILGFRHKLKASLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLTS-ISPPTATITFIILALLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTVLATT-ITLFALMQLKVSLYTFPQ-TPSVK-SIELMKT-NNP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLDDMWAKTHFAVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLIMVFMIWEAFASKREVLQVEHTTTNLEWLHGCPPPYHTFEEPAFVKV-K--------MAYPFQLGLQDASSPIMEELMNFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTSDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKNFENWSLSMI----------MTHQTHAFHMVNPSPWPLTGALSALLLTSGLVMWFHYNSIILLSMGLLANTLTMYQWWRDVIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNNMNQALLITILLGVYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIICLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTIIRKKHPLIKILNHSFIDLPAPSNISSWWNFGSLLGLCLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGIYYGSYNMIETWNMGIVLLLAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDFLGVLILLTALMILVLFFPDILGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAAMPYLHTSKQRGLTFRPITQTMYWILVADLLILTWIGGQPVEYPFIIIGQIASIAYFAIIVIFMPIAGMIENDIL---DLN------MVY--------FINILTLLVPVLIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFIKEPLRPLATSTTLFIIAPTLSLTLALSLWIPLPMPHPLVNLNLGILFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMSGSFSIQALIYTQEPLWLLIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIILMNALSTIVFLGPFHNLHNPEFYTTNFMLKTLILTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISIPIFMASI-P-PYT--MNP-ITLLIIYFTIFMGPMITMLSSNLFIMWIGLEMNLLALIPLMINNSNPR-STEAATKYFLTQATASMILLLSIIMNFKQLGLW--TFQSETNNLIMTMTFISLAIKLGLAPFHSWLPEVTQGIKLKVGLILLTWQKVAPLSIMSQFHELMNPKMLILS-AMISVLIGAWNGLNQTQVRKIMAYSSIAHMGWMVSILSYNPSLTLLNFLIYILMTIPMFMIFHAHSFTSITSM---SLMWNKMPMALPMISLILLSTGGLPPLTGFLPKWAIITELLKNNNPILATLMAMAALINLFFYTRLIYSTSLTTFPTNNNSKMYI-HHNHTKTNNIL-------APLMILSTSMLPLSPLLL------MN-MMLVLLINITLSMILISVAFWLPHLNMYTEKANPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQYPNMSLPTIMAFTLITILALGLAYEWTQKG--LEWTE-MTPAVFNITLAFTFSLLGTLMFRSHLMSTLLCLEGMMLSLFILATITPLNTHSMIMFPIPIVILVFAACEAAVGLALLAKISNTYGTDFVQNLNLLQCMLKIIIPSLMLLPLTWLSNNKKVWINVTTHSLLINLISI-NLLWQNNESSLNFS-IVFSADPLSAPLLVLTTWLLPLMLLASQNHMKKEHEYNKKLYISLLVTLQILLIMTFSANELIMFYVLFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALIYIQNSTGTLNFILMSLNYLSIS-QTW-----SNNILWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRISMILDP-VTKSMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAIMIQTPWSFMGATALMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMVFPLMATWWIMASLANLALPPTINLIGELMITTSLFSWSNPSIILLGTNILITSLYSIYMIVTTQRGKLTNHMNNLQPSHTRESTLMALHIIPLILLSINPKLIMGLTM------MNTITSS-ILLIFMLLLLPMAIS---FTNLPKQ-MNFPSYVTLC-IKYAFFISLIPLSSFFNTGTEVMITNWHWITIGSMKLSLSLKFDFFSIIFLPVALFVTWSIMEFSMWYMHSDPNLDRFIKYLLLFLITMVILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRSDANTAALQAILYNRIGDIGFILAMAWFCTKTNSWDLQQIFIM-DK-PNIIPLMGLVIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLISNNSTILTAMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNNEQDVRKMGGLAKAMPFTSSCLTIGSLALTGTPFLTGFYSKDLIIEAANTCYTNAWALLITLVATS-MTAVYSMRIIYFVLMSKPRFPPTIIINENNPLLINPIKRLALGSILAGFFISYNIPPTTIQVMTMPWYLKTMALMVTIAGFTIALDLNNLTNNLT--PTKPSSSNSFSTSLGYFPTIMHRLLPLKTLNMSFKTALTLLDLIWLEKAIPKMTSTMHMITSS--TLSNQKGMIKLYFLS---FLMTL--LFIPIMLII---------------- +>Trachypithecus_shortridgei_Shortridges_langur +----MNENLFTPFTTPT-LLNLPAVVPIILFPMLLFPTSK-HLVNNRLIAIQQNLTQLILKQMMMIHNTKGRTWSLMLVSLITFIATTNLLGLLPHTFTPTTQLSMNLAMAIPLWAGTVITGLRFKTKSSLAHFLPQGTPTLLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGSAVLALST-INFLATSLTFVLLLLLMILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFIIIMTML-PALYLMMQLKLLNMNYYL-PPSQK-TPNTQVF-NNP-W-QLKWTKIYLP-HL-QPPHS---MLINRWLFSTNHKDIGTLYLLFGAWAGTVGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNLSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQVCAKAHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSTGSFMSLVAMLLMIYMIWEAFASKRKVLSIEQPTYNLEWLHGSPPPYHTFDEPTFIKA-K--------MAHPVQLGLQDATSPIMEELIAFHDHAFMIISLISFLVLYVLLSVLTTKLTSTNITDAQEMETIWTILPAIILVLIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAIPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGAFSALLMTSGLIMWFHFYSTTLLTLGLLTNMLTMYQWWRDIVRESTYQGHHTMPVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPHLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKQMIQALFITILLGIYFTLLQMSEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTVCLIRQLLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTPLRKSNPIMKIINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWTIRYLHANGASMFFICLFLHVGRGLYYGSFLLTETWNIGIALLLMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSIDNPTLTRFFTLHFTLPFIIATLTAIHLLFLHETGSNNPCGIPSNSDKIPFHPYYTIKDILGLIFLLLILMTLVLFSPDLLSDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPMLHKSKQQSMAFRPLSQFLLWFLITILLTLTWIGSQPVSQPFIMIGQVASTMYFTTILILMPLASLIENNLL---K---------MF--------TMNILLVTLPAIAAMAFLTLTERKLLGYMQLRKGPNIVGPYGLLQPFADAVKLFTKEPLKPSTSTTTLYVIAPALAFTIALLLWMPLPMPNPLIDLNLGLLFILATSSLAVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSILLMSGSFNLRTLITTQEHLWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNTEYAAGPFALFFMAEYMNIIMMNALTTTIFLGTLYPIHSPELFTTCFITKTLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLAFLMWHISISITTSGI-P-PQI--MNP-LAQLVIYSTMLMGTIITLLSSHWFLAWAGLEMNMLAFTSILIKKTNPR-STEAATKYFLVQSTASMILMMAIMYNSLFPEQW--TMMNNINQLSSLLMTMALAMKLGMAPFHFWIPEVTQGTPLISGLLLLTWQKLAPISIMYQIYSSINTSILLVL-SILSIMAGSWGGLNQTQLRKILAYSSITHMGWMMTTLTYNPNITIFYLLTYIILTTTAFLALSLNSNTTALML---SHTWNKLTWLMPLMSSTLLSMGGLPPLTGFLPKWITIQELTKNNNFIIPTIMIIMTLLNLYFYLRLIYITSMTLLPTSNNTKMKW-QFENTKPTLLI-------PPLIILTTLLLPMSPTILTIP---MN-LVLVLTTNTFLTLLLTIIMFWLPLLNPYAEKANPYECGFDPLNSARIPFSMKFFLIAITFLLFDLEIALLLPLPWALQTTNLPMMIKSSMTLIIILTLGLAYEWTQKG--LDWNE-MPIIYMNIMLAFLISLLGMLTYRSHLMSSLLCLEGMMLSLFIMSTLMALNTHFPLANVVPIALLVFAACEAAVGLALLISISNTYGLDHIHNLNLLQCMLKMILPTIMLLPTTWFSKNSMLWINLTMHSLVISLIPL-MFFNQTSSNLTSCS-TYLSSDPLSTPLLTLTAWLLPLMIMASQYHLHNESPSRKKLYLSMMIFLQISLIMTFMATELILFYILFETTLIPTLIIITRWGNQAERLNASTYFLFYTLTGSLPLLIMLTFTYNNMGSLNIMLLTLTAQKLT-TTW-----SHSLTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRFTSILSP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKALIAYSSVSHMALVIMASLIQTPWSFTGATILMIAHGLTSSMLFCLANSNYERTHSRIMMLSRGLQTLLPLVAFWWFAANLTNLALPPTINLIGELLVVATSFSWSHVTIMLTGLNMLITALYSLHMFITTQRGLLTFHIINMKPSFTRENMLMFMHISPIILLSLNPNIIMGFTS--------MYASI-IMLMLTYLMLPIIMT---LIKPSKN-HLYPNYVKTI-MMFAFIFSLFPVTLYILLDQDVIISNWHWVTIQSLELTLSFKLDYFSMMFIPIALFVTWCIMEFSLWYMSSDPNINQFFKYLLIFLITMLILITANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAATQAILYNRIGDIGFVLAMAWFLLHCNSWDLQQMFILDSN-PNLLPLMGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNMLIQSLMLCLGAITTLFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKALLFICSGSIIHNLNNEQDIRKMGGLFKMMPLTSTSLTIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALSTTLIATS-LTSAYSTRTIILALTGQPRFSTSIYINENNPALLNPMKRLTLGSLLAGFLITNNIFPTTPPQLTMPLYLKLLALCVTTLGFLMALDLTLMTNNLK--MNIPSHMFKFSNMLGYFPTTIHRVIPYQNLIMSQNLAFILLDSIWLEKSMPKMISHIHITTSI--IMTTQKGMIKLYFLS---FLITL--TLIMLLMV----------------- +>Lepus_coreanus_Korean_hare +----MNENLFSSFITPT-MMGLPIVILIIMFPTLLFPAPT-RLINNRLVSAQQWLAQLILKQMMMMHSPKGRTWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKTSLAHFLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGAALALIS-ISPTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLVTIIAMI-LTLFALIQLKFHKYSYPL-SPTPK-TLKPTSF-PSP-W-ETKWTKIYSP-LL-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDQTWAKIHFTVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMVMIFMIWEAFASKREVETVELTTTNLEWLHGCPPPYHTFEEPAYVKA----------MAYPFQLGFQDASSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLNPGDLRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLISTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSLSMI----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSPSLLLIGLLTNTLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIKPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMQQALAITILLGIYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCLLRQLHFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNHSLIDLPAPSNISVWWNFGSLLGLCLMIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWLIRYLHANGASMFFICLYMHVGRGIYYGSYTYLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMIHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDLLGFLVLILLLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIIPFLHMSKQRSMMFRPISQVLFWILVADLLTLTWIGGQPVEHPFITIGQVASILYFSIILILMPLASLIENKIL---KW--------MF--------LINTFLLILPVLLAMAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLRPLTSSSLLFIIAPTLALTLALSMWLPIPMPYPLINLNMGVLFILATSSLAVYSILWSGWASNSKYALFGALRAVAQTISYEVTLAIILLCVLLMNGSFTLSSLITTQEYMWILFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNIIMMNALTAILFLGSFHSHTNPEMFTINFATKTLLLTMTFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWYISMPIMLSSI-P-PHM--MNP-LIFSIILFTLFLGTMITMFSSHWLTMWIGLEMNMLAIIPILINKATPR-STEAATKYFLTQATASMILMMAITLNILDSGQW--TLINPQNNFTPIMIMLALIIKLGMAPFHFWVPEVTQGVPLKSGLILLTWQKLAPLSILYQISPSIDSTMMMLV-AILSIMVGGWGGLNQTQLRKILAYSSIAHMGWMAAIITFNPNTMILNLIIYILLTIPMFMMFIQHTNTTTLSL---SQMWNKTPLMVTAILITLMSLGGLPPLTGFIPKWIIIQELTKNGNIIMPTMMAILALLNLYFYLRLIYSSSLTMFPTTNNLKMKW-QFEPMKRMTFI-------APLIILSTMFLPLTPMLSVLN---MN-LILVLLTNMSISLILVTIAFWLPQLNIYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAAQFNNLNLVLIMALMLISILALGLAYEWIQKG--LEWVE-MPSIYVNIFLAFIFALLGMLVYRSHLMSSLLCLEGMMLSLFILITLTALNMHYTLSFMFPIVLLVFAACEAAIGLALLVMVSNTYGMDYVQNLNLLQCMLKTIIPTIMLIPTVWWSKNHMIWINATIYSLLISLTTF-LLLNQPNDTNLNLS-TTFFSDALSTPLLMLTVWLLPLMILASQHHLSKESLLRKKTYISLLISLQIFLVMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLLVALIHLQNSMGSLNFLLIQLSNESLP-TSW-----SNSLMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITILLNP-ITEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERVHSRTMLLARGLQMILPLMAAWWLLASLTNLALPPTINLLGELLIVMASFSWSNLTIILMGTNVLITALYSLYMLSTTQRGKFTYHTNNISPTFTRENTLMMLHLAPLLLLSINPKIILGPML------MNLFSTS-MAVSIIILVLPIMAS---FTNIFNH-NNYPYYVKTS-VSYAFMISLIPTLIFIISNQETMVSNWHWMTIHTLKLTTSFKLDYFSMLFTPIALFVTWSIMEFSMWYMHSDPKINQFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFIMAMAWFAINLNTWEFQQMFMSDNN-VTILPLIGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLLENNKTAQTLILCLGAITTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKTLPFTSSALTIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALIITLIATS-LTAVYSTRIIFFALLGQPRYPTLIIINENNPSLINSIKRLALGSIFAGFLITNLVTPNSIPQMTMPLYMKLTALFVTILGFTIAMELNQLSLHLK--MSTQSNSFNFSNMLGFFPATMHRLLPYVNLSASQNVATLLLDMTWTEKAIPKNISDIQILAST--SVSSQKGLIKFYSLS---FLISM--LLALFILA----------------- +>Herpestes_javanicus_small_Indian_mongoose +----MNENLFASFTTPT-MMGLPVVILIIMFPSIMFPAPN-RLINNRLISLQQWLIQLTSKQMLAIHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVIMGFRHKTKSSLAHFLPQGTPLPLIPMLVVIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLMN-ISTSIAFITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIVSMI-TTLFIVFQLKLSKHLYPS-NPELK-STISLKQ-PTP-W-EKKWTKIYSP-LS-LPQQ----MFMDRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGSLFGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGRNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDTWAKAHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNAISSMGSFISLTAVMLMVFMVWEAFASKREVAMIEMINTNLEWLHGCPPPYHTFEEPTYVVS-K--------MAYPFQLGFQDASSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINSPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMVPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMGTRPGLYYGQCSEICGSNHSFMPIVLELIPLKHFEKWSTSML----------MTHQTHTYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTVLLILGMITNTLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALLITISLGVYFTLLQASEYYETTFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIVNESFIDLPTPSNISAWWNFGSLLGVCLILQILTGLFLAMYYTSDTSTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGMYYGSYTFMETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGISSDSDKIPFHPYYTIKDILGLLIMLMMLMMLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSIMILAIAPLLHTSNQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIAIGQLASILYFSIILILMPVFGTIENQLL---KW--------MF--------MLNILSLSIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADALKLFTKEPLRPLTSSVSMFIMAPILALTLALIMWIPLPMPHPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLATLITTQEHMWLIFPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNSLTTVLFFGASHNPYMPELYTTNFMVKTLILTIIFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMTASI-P-PLT--MKP-SILLTIMMTVISGTMIVLTSSHWLMVWIGFEMNTLAIIPILMKKSNPR-AIEASTKYFLTQATASMILMMGIAINLLYSGQW--TLSKTLHPAASAMMTIALAMKLGLAPFHFWVPEVTQGIHMSSGLILLTWQKIAPLSILYQISPAINPNLLLPM-AIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAITLYNPTMMVLNLTIYIIMTLTTFMLFMYSSSTTTLSL---SQTWNKTPLITSLILMLMLSLGGLPPLSGFIPKWMIILELTKNEMIIMPTLLAITALLNLFFYMRLTYTTTLTMFPSTNNMMMKW-KFDSTKKMIFL-------PPLTVISTMLLPITPLLSILD---MN-MMLALSVNTMLSALLVLIAFWLPQLNPYAEKASPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWASQTNNLSTMLTMALLLILLLAASLAYEWTQKG--LEWTE-MSIVYINIFLAFIMSLLGMLIYRSHLMSSLLCLEGMMLSLFVMITLIILNNHFTLASMTPIILLVFAACEAALGLSLLVMVSNTYGNDYVQNLNLLQCMLKIILPTIMLIPLTWLSKPNMIWINSTAYSLLISLISL-TYLNQLNDNSLNFS-LLFFSDSLSAPLLALTTWLLPLMITASQSHLSKETLTRKKLYITMLITLQLFLIMTFTSTELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLYIQNTSGSLNFLIMQYWNKPMS-TTW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLNP-LTNQMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLANLALPPSINLVGELFVIMASFSWSNTTIILMGTNIIITALYSLYMLITTQRGKNTYHTKSIKPSFTRENALMALHMLPLVLLSLKPKIILGPPY------MNMFTSL-TLTAMFMLLLPIMMI---STKAYKN-DLYPNYVKTT-VSYAFITSMIPAMMXINSGQEAIISNWHWLTIQTLKLSMSFKLDYFSVIFVPVALFVTWSIMEFSMWYMHADPYINRFFKYLLMFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMSMAWFLSNTNTWDFQQIFVTQYE-NLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQNKMIQTSTLCLGAITTLFTAVCALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKSMPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-LTAVYSTRIMFFALLGQPRFNSMVLINENNPLLVNSIKRLLIGSIFAGYLISYNIPPMNIPQMTMPNYLKLMALTVTIMGFILALELNLATKNLK--FNYSSNFFKFSNLLGYFPTIMHRSLPLANLNMSQKSASMLLDTIWLENVMPKTISHFQMKSSS--IVSNQKGLIKLYFLS---FMITM--TLSILLI----------NFHG---- +>Meles_meles_Eurasian_badger +----MNENLFSSFITPT-MMGLPIVVMIIMFPSILFPSPN-RLINNRLISIQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVIVGFRHKTKASLAHFLPQGTPLLLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGSATLALMN-ISTATAMVTFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWPITILSMI-ITLFIMFQLKVSKYNFPE-NPEQK-LVSVPKT-ITP-W-EKKWTKIYFP-LS-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQIPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDVWAKIHFTIMFVGVNTTFFPQHFLGLSGMPRRYSDYPDAYTAWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVLTVELTSTNVEWLHGCPPPYHTFEEPTYVLS-K--------MAYPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASML----------MTHQAHSYHMVNPSPWPLTGALSALLMTSGLVMWFHFNSIYLLTLGMTTNLLTMYQWWRDIIREGTFQGHHTPTVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGYRKHMLQALFITISLGLYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINNSFIDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYMFPETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAVIHLLFLHETGSNNPSGIPSNSDKIPFHPYYTIKDILGVLLLMLMLMILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLFTLTWIGGQPVEYPYIAIGQLASILYFTILLILMPATSIIENNLL---KW--------MF--------MINIISLIVPILLAVAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAVKLFIKEPLRPLTSSITMFVMAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGAFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHTPYLPELYSINFIMKALLLTIFFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYMALPVMTASI-P-PQT--MKP-PIFIIIMSTVILGTIMVLTSSHWLMIWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMLGIITNLLLSGQW--TMLNTPNLITSNMMTIALAMKLGLSPFHFWVPEVTQGIPLSSGMVLLTWQKIAPLSVLYQISPSINPNLLTIM-AMTSVLVGGWGGLNQTQLRKILAYSSIAHMGWMIAVTAYSPTLMALNLAIYITMTLGTFMLFMLSTSTTTLSL---SHTWNKFPLITSLILMVMLSLGGLPPLSGFIPKWMIIHELTKNNMIIAPMFMAMTALLNLYFYMRLTYATALTMFPSTNIMKMKW-QFENTKNMTFL-------PPLIVISTMLLPLTPMALALL---MN-MLLTLLINVSLASLLVLIAFWLPQLNIYTEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSSNLNTTLATALLLILLLATSLAYEWAEEG--LEWNE-MSMVYINILLAFSLSFMGLLIYRSHLMSSLLCLEGMMLSLFTMMAVTILVNHLTLASMAPIILLVFAACEAALGLSLLVMISNTYGTDYVQNLNLLQCMLKIIVPTMMLIPLAWLSKPNMIWINTTAHSMLISLISL-TYLNQLADNNLNFS-LLFFVDSLSAPLLMLTTWLLPLMLMASQHHLSKETLTRKKLYITMLIMLQLFLIMTFTATELIMFYILFEATLMPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLWAQNNLGTLNLLVIQYWAQPLS-NSW-----SNALLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMLLNP-LTNLMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAVLIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLVGELFVVIASFSWSNITILLMGINITITALYSLYMLITTQRGKYTHHIKNIKPSFTRENSLMALHLLPLLLLSLNPKLILGPIY------MNLFSSS-ILVTLFMLTIPIMMT---NTTVYTN-KLYPQYVKTT-VSYAFMISLIPTMIFLHMGQDMMISNWHWITIQTMKMSLSFKLDYFSMIFIPVALFDTWSIMEFSMWYMHSDPYINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLSNLNTWDLQQIFMTNHE-NLNIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKAMQSITLCLGAMTTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLFKVLPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLVATS-MTAAYSTRIMFFALLGQPRFSPTIMINENNPLLINSIKRLLLGSILAGFLISHNITPTTIPQMTMPHYLKTTALTVTILGFILALELSLTMQSLK--FKHPSNLFTFSNMLGYFPTIFHRLMPKMNLLMSQKSATMLLDMIWLEKTLPKSISQFQMKSSM--TISNQKGLIKLYFMS---FILTL--VLSLLVL----------NFHE---- +>Chinchilla_lanigera_long-tailed_chinchilla +----MNENLFASFATPT-LAGLPIVTLIILFPSIFFPSPN-RLTNNRLATFQQWLIKLVLKQMMLIHNNKGRAWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAATVVLGFRHKTKASLAHFLPQGTPAMLIPMLVAIETISLFIQPVALAVRLTANITAGHLLMHLIGGATSVLIP-ISPTAALTTFTILFLLTILEFAVALIQAYVFTLLVNLYLHDNTMPQLNTATWFITILSML-ISLFIIFQLKISTYSYNP-NPQTL-PLKYKKQ-EMP-W-EKKWTKTYLP-LL-PHQH----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLTSSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTFYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNYAWAKTHFFIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTFWNAISSSGSFISLTAVMVMIFMIWEAFASKRVVTKTELTSMNLEWLHGCPPPYHTFEEPTFIKT-P--------MAYPYQLGFQDATSPVMEELLHFHDHTLMIVFLISTLVLYLISLMLSTKLTHTNTMDAQEIETIWTVLPAIILIMIALPSLRILYMMDEMNNPLLTVKTMGHQWYWSYEYTDYEELNFDSYMIPTTELKPGELRLLEVDNRLILPMETPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSLRPGLFYGQCSEICGSNHSFMPIVLEMVPLKSFESWSSSML----------MTHQSHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSKTLLLLSMLSNLLTMYQWWRDIVREGTYQGHHTTIVQKGLRYGMVLFIISEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGVFTINPLEVPLLNTSVLLASGVSITWSHHSLMEGDRKQMIQALTITILLGIYFTLLQISEYFEASFAISDGVYGSTFFVATGFHGLHVIIGSTFLLVCLLRQFNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTNTRKSHPLLKMINHSFIDLPTPSNISTWWNFGSLLGVCLILQIITGLFLAMHYTADTTTAFSSVTHICRDVNYGWLIRYLHANGASMFFIFLYFHVGRGIYYGSYLFLETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPTLVEWIWGGFAVDKATLTRFFAFHFILPFIITALVLVHLLFLHETGSNNPSGLNPNSDKIPFHPYYTIKDILGMLLMMLALLTLTLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALISSILILLLFPTLHLSNQRSMMFRPISQCFMWILVANLLILTWIGGQPVEYPFIAIGQLASISYFLTILILLPLTNMLENKLL---KW--------MF--------MINFLTLIIPILLAMAFLTLMERKILGYMQLRKGPNIVGPYGILQPIADALKLFIKEPVHPSTSSIVLFTIAPTLALTLALSLWIPMPMPHPLINMNLGALFILATSSLAVYSILWSGWASNSKYALFGALRAVAQTISYEVTLAIILLSILLLNGSFNLSTLSYTQKNIWLLLPTWPLATMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIILMNALTTIIFINTMPNPLHPEMFTMNFMLKTLSLTALFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISMPMITSSI-P-PQTI-MNL-ATTLVIYPTLFMGTIITLLSSHWLLMWIGLEMSMLAVIPILMGKANPR-STEAATKYFMTQATASMALLMSILLTVMHSGQW--TIIYTNNQTTSLIMTLALLMKLGLAPFHFWVPEVTQGVCLKSGMILLTWQKIAPLSILFQISPVINQSLTLTS-AIMSILLGGWGGLNQTQLRKILAYSSIAHMGWMLAALIYNPSIMLFNLIIYIVLTLSMFLTLSINNNSTTLSL---SLAWSSSPLIIIIILLPLLSLGGLPPLTGFSPKWVIIQEMVKNNNIILPTFMSITALLSLYFYLQLTYSTSLTLFPSTNNTKTKW-HFQPTKKIIAL-------PSLITLSTLLIPLTPSMIILN---MN-TLISLLSNYLLTTLLITIAFWLPQLNTYTEKTSPYECGFDPTESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSPNLKLTILMSLGLILILALGLAYEWSQKG--LEWDE-MSSISLNLITAFTISFLGAMIYRSHIMSSLLCLEGMMLSMFILSSTIILNLHYMSFFPMPMILLVFAACEAAIGLALLVMISNTYGLDYVQNLNLLQCMLKIIIPSIMLIPMTWLSKNTMMWINPTIHSLMIALMSL-SYLNKLDITNQNHS-LKFASDPLTSPLLILTTWLLPLMIMASQHHLSKETEIRKKTYISLLILLQISLIMTFTATEMIMFYILFEATLIPTLIIITRWGNQTERMKAGLYFLFYTLAGSLPLLIALIYLQNSLGSMNFLLFPYNKHMLN-STW-----SNSLLWIACAMAFMIKLPMYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRISQLLEP-MTNYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERTHSRTMLLARGLQMTLPLMSTWWILSSLTNLALPPTINLVGELFIILSTFSWSNFTIILTGLNMLITALYTLFMLITTQRGKPPYHISNITPTFTRENSLMALHIIPLLLLTLNPKIILGNLY------MNLSTSS-FILTLIILTLPIFTP---MTNLHKT-LPYPNYVKLI-ISTSFFLSLIPTLMLFNSNQETLTTNWNWIIAPTIHMNLNLKMDHFSILFTSVALFVTWSIMEFSLWYMHSDPHMSKFFKYLLMFLITMMILVSANNLLQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGMVMSMCWLLLHSNTWDLQQIFITQNH-PHLLPLMGLLVAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMQNNQNILTASLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLYKTLPITTSSLIIGSLALTGMPFMTGFYSKDLIIESACTSNTNAWALLTTLIATS-LTAAYSTRMIYFTLLNNPRSTPQLNMNENNPLMVNPIKRLSIGSIFAGFILSYNITPTDIPQMTMPLYLKFSAILTTILGFTIAMELSSMTLNLK--IHYSNKLSNFSNLLGYFTTLTHRIQPHKNLLTSQNLATSMIDMIWLEKLIPKSISNSQMTASS--LTSNQTGLIKFYFLS---FLLTI--TLAIMTTTY--------LFE----- +>Martes_americana_American_marten +----MNENLFSSFITPT-MMGLPIVIAITMFPSIMFPSPN-RLINNRLISIQQWLVHLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVVTGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTITAMVTFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-ITLFFMFQLKVAKYNFPE-NPEPK-LMSVSKS-TTP-W-EKKWTKIYSP-LS-LPLQ----MFTNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDIWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVLTVELTSTNIEWLHGCPPPYHTFEEPTYVLS-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLVMWFHFNSMALLTLGMTTNLLTMFQWWRDVVREGTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGLYFTLLQASEYYEAPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSFIDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYMYPETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALFLILALMMLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILVLAIVPLLHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFAILLILMPAISIIENNLL---KW--------MF--------MINIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFVMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHTPYLPELYSVNFTMKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASI-P-PQT--MKP-PILAIIMSTVISGTIMVLISSHWLTIWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMLGVVINLLLTGQW--TVLNKPNPIASNMMTVALAMKLGLSPFHFWVPEVTQGVPMPSGMILLTWQKIAPLSILYQITPSMNPNLLVAM-AIMSVLVGGWGGLNQTQLRKILAYSSIAHMGWMIAVTTYNPTLMLLNLTIYITMTLGTFMLFMLSTSTTTLSL---SHTWNKLPLIASLILMTMLSLGGLPPLSGFIPKWMIIHELTKNDMTTMATFMAMTALLNLYFYMRLTYATALTMFPSTNIMKMKW-QFESTKNTTLL-------PPLIVISTMLLPLTPMMLTLF---MN-MVLTLLINASLASLLVLIAFWLPQLNIYAEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSVNLKTTLTMALALISLLALSLAYEWTEEG--LEWNE-MSMVYINIFLAFILSFMGLLIYRSHLMSSLLCLEGMMLSLFVMMTVTILTNHLTLASMTPIILLVFAACEAALGLSLLVMISNTYGTDYVQNLNLLQCMLKIIVPTMMLIPLTWLSKPNMIWINTTAYSMLISLIGL-TYLNQFTDNNLNFS-LLFFVDSLSAPLLMLTTWLLPLMLMASQHHLSKETLTRKKLYITMLVMLQLLLIMTLTATELIMFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLWLQSNLGTLNLLVVQYWTQPLL-SSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-LTDFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMVLARGLQTLLPLMAAWWLLASLTNLALPPTINLLGELFVAMASFSWSNITIILMGINITITALYSLYMLITTQRGKYTHHVKNIKPSFTRENSLMALHLLPLLLLSLNPKVILGPIY---MKVINLFTSS-ILMTLFMLTLPIMMT---NTSMYTN-KLYPQYVKTT-ISYAFMISLIPTMMFLHLGQDTMISNWHWITIQTMKLSLSFKFDYFSMIFMPVSLFVTWSIMEFSIWYMHSDPYINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDVGFIMAMAWFLTNLNTWDLQQIFMTNHK-NLNIPLIGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTLQTITLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLVATS-MTAAYSTRIMFFALLGQPRFNPIITINENDPHLINSIKRLMFGSIFAGFLISYNITPTTTPQMTMPHYLKMMALIVTILGFILALELNLMMQNLK--FKYPSGLFKFSNMLGYFPTIIHRLMPKTNLLMGQKSASTLLDMTWMEMILPKSISHFQMKSSI--TISNQKGLIKLYFMS---FMLTL--TLSLLTF----------NFHG---- +>Proechimys_longicaudatus_long-tailed_spiny_rat +----MNENLFASFMTPN-LMGIPVAVFIIMFPALLFPNPN-RLINNRTVTIQQWLIKLILQQMMSIHSIKGRTWSLMLITLILFIGTTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVLLGFRHKTQTSLAHFLPQGTPLVLIPMLVVIETISLFIQPMALAVRLTANITAGHLLMHLIGGAASVLFS-INTPAALTTFIILLLLTMLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTITSTL-LTLFIIFQLKTLTHQFPI-NPQST-YLKQTKQ-STP-W-EKKWTKTYLP-LS---------MLINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDQTWAKIHFFIMFAGVNITFFPQHFLGLSGMPRRYSDYPDAYTFWNTVSSMGSFISLTAVMVMIFMIWEAFASKREVLTTELTSNNLEWLHGCPPPYHTFEEPTYIKI----------MAYPYELGFQDATSPIMEELLHFHDHTLMIVFLISTLVLYLISLMLTTKLTHTSTMDAQEVETIWTILPAMILIMIALPSLRILYMMDEVNNPLLTVKTMGHQWYWSYEYTDYEELNFDSYMTPTTDLNPGELRLLEVDNRVVLPMEIPVRMLISSEDVLHSWAIPSLGLKTDAIPGRLNQTILTSSRPGLFYGQCSEICGSNHSFMPIVIEMVTLKAFENWCSSML----------MTHQTHAYHMVNPSPWPLAGALSALLLTSGLGMWFHFNSTTLLKLSMLTNMLTMYQWWRDVVREGTYQGHHTSTVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGYWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKQMTQALAITIALGAYFTLLQVSEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLLTCLLRQLYFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKSHPLIKIINHSFIDLPTPSNISAWWNFGSLLGVCLILQIVTGLFLAMHYTADTTTAFSSVTHICRDVNYGWLIRYAHANGASMFFIFLYFHIGRGIYYGSYTFMETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPTLVEWIWGGFSVDKATLTRFFAFHFVLPFIISAMVMIHLLFLHETGSNNPSGLNSDSDKIPFHPYYTIKDILGFLFMMLALMTLILFSPDLLGDPDSYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILMLFPMMHVSKQRTMTFRPLSQCLLWILVANLIILTWIGGQPVEHPFITIGQLASISYFCIILILMPTMSFMENKLL---KW--------MY--------LINFILTVVPILLAMAFLTLMERKLLGYMQLRKGPNMVGPYGVLQPMADALKLFIKEPLHPSTSSMLLFTIAPCLALTLAMSMWIPIPMPHSLINMNLGALFILATSSLAVYSILWSGWASNSKYALFGALRAVAQTISYEVTLAIILLSILLLNGTFTLSTLMTTQKNIWLILPTWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNILLMNALTTIIFLNTMSTTAHPELHTMNFMIKTLMLTALFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISMPISLSSI-P-PQSI-MNI-MTMTIIYTTLIMGTLTTLISSHWLLMWVGLELSMMSIIPILMNKTNPR-STEAATKYFLTQATASMILLMSVITTMMYSGQW--SIIYSNNMFISLALTLSLIMKLGLAPFHFWVTEVTQGTSLTSGMILLTWQKIAPLSILMQISPTINQPLIISS-ALLSTLLGGWGGLNQTQLRKILAYSSIAHMGWMLVVMNFMPSISLFNLMLYIILTISVFTALNMSNNLTTLSL---SHVWSTAPPTIIIILMNLLSLGGLPPLAGFAPKWIIIQELVKNNNIMIPVLMTMMALLSLYFYIRLTYSTTLTLFPTTNNTKTKW-HFHNKKAMTIL-------APLTTLSTMTLPLTPLLFTLN---MN-IIMSIMINYLLTIILITIAFWLPQLNIYTEKASPYECGFDPTEITRLPFSMKFFLIAITFLLFDLEIALLLPLPWAFQSIKLNMTLWISMALILILSLGLTYEWLQKG--LEWTE-MTSILFNMTTAFAVSFVGVMIYRSHMMSSLLCLEGMMLSLFILGTTTMLNLQYTSSFSTPILLLVFAACEAAVGLALLVMISNTYGIDYVQNLNLLQCMLKIIIPTAMLIPTVWLSKTSMLWINSTSYSMLIALISL-TYLNKPDTSNTSYS-LISFCDSLSSPLLVLTTWLLPLMIIASQHHLKNETKIRKKLYISLLISLQMFLILTFSATEMIMFYILFETTLIPTLIIITRWGNQTERMKAGLYFLFYTLIGSLPLLISLIYMQNQLGSLNILLFNYCSHYTH-YNW-----SNNLMWLACIMAFMIKLPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRILQLLEP-LTNHMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFTGATALMIAHGLTSSLLFCLANSNYERVHSRTLLLARGLQMLFPLMALWWIIASLTNLALPPTINLIGELLIIMSTFSWSHLTIILTGLNILITALYTLFMLTSTQRGKLPYHIHNLPSTFTRENILMTLHIIPLLLLTLNPKIILGSLY------MNLFTST-FTLTLTLLMLPVLSP---MTNFHKK-VSYPHYVKVI-ISLCFLLSLIPTTIMFYYNHEAVTSNWNWLTIQTMNLNFNIKLDYFSVLFMSVALFVTWSIMEFSLWYMHSDPYMNKFFKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRSEANTAALQAILYNRIGDIGFIMSMAWFILKYNSWELQQIFMTHNE-NYFIPMLGLLMAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPITQNNKTMLTMCLCMGAITTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLYKTMPITSSSLMIGSLALTGTPFLTGFYSKDLIIESAVTSYTNAWALTTTLIATL-LTAVYSTRIIFFALLNNPRFNFTYSMNEKNPSMINPIKRLAVGSIMAGFIMTYNIPITNMPQMTMPQNMKIMALFLTILGFTIAMELNLMTKNLK--TDYSSKLSNFSNMLGYFPVLSHRIFPYTNLSTGQNLAFSTVDSIWLEKITPKHISTAQTKMSM--TTSTQTGMLKLYFMS---FFITM--ALTITLMV----------------- +>Saimiri_boliviensis_Bolivian_squirrel_monkey +----MTQNLFTIFNIPV-VLGMPLAVLIIMFPSMLILPPN-NTINNRFSSIQQWLVQLTLKQMMITHSTTGRTWSLMLLTLITFISLNNLLGLTPYAFTPTTQLSMNIGMAIPLWMATVLMGLRLKTKTSLAHFLPQGTPTLLIPMLIIIETISLFIQPVALAVRLTANITAGHLLMHLLGTASLTLLS-IYLSSSLATIIVIILLITLELGVALIQAYVFTLLVSLYLHNNSMPQLDTSPWPMVILSMI-VTLFYITQLKMLNFISYT-NPLFK-SIKTKEH-KTT-W-KSKWPKTYSP-SL-MSQ-----MFMSRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRAELGQPGSLMEDDHIFNVIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGPSVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVFITAVLLLLSLPVLAAGITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSAAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIISSVGSFISLVAVILMIFMIWEAFSSKRKVLVIEQTSTNLEWLYGCPPPYHTFEESTYVKL----------MATPAQLGLQNATSPIMEELIAFHDHALMIIFLISSLVLYIMSLMLTTKLTHTSTMNAQEIEMIWTILPAIILIMIALPSLRILYMTDEFIKPYLTLKAIGHQWYWSYEYSDYEDLAFDSYIMPTYFLEPGEFRLLEVDNRTTLPMEADIRMLVSSHDVLHSWAVPSLGVKTDAIPGRLNQITLASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWAS-------------MTHQTHPYHMVNPSPWPLTGALSAFLLTSGLIMWFHFYLTLLLTAGLLASMATMFQWWRDVVRESTYQGHHTPPVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPQTGGHWPPTGILPLDPMEVPLLNTAVLLASGVTITWTHHSLTEANQKESTQALAMTIALGIYFTLLQMSEYSETPFTISDGIYGSTFFMATGFHGLHVIIGTTFLTMCYIRQQLHHFTPNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTSPRKTHPLKKMINNSFIDLPTPSNISFWWNLGSLLGACLIIQITTGLFLAMHYTPDTQTAFSSVAHITRDVNHGWTIRYMHANGASMFFTCLFLHIGRGLYYGSFLSRETWNIGTILLLTTMATAFMGYVLPWGQMSLWGATVITNLLSAIPYIGSNLVEWVWGGFSVDKATLTRFFTFHFVLPFIIAALATIHLLFLHETGSNNPSGMTSNPDKITFHPYYTIKDILGLILLLLLLMSLTLFMPDLLTDPDNYTLANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLMIIPTTHLSNQQSMTFRPITQIMFWMLTANLLTLTWIGGQPVEYPFIIIGQIASIMYFLIITTLIPLSALIENKLL---KW--------MF--------MINLLLLIIPALIAMAFLTLTERKILGYMQLRKGPNTIGPYGMLQPIADAMKLFTKEPLLPTTSTTTLYVIAPILALSVALILWTPLPMPHPLVNFNLGLLFVLATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNIHSLITTQEHSWLLLPAWPLTTMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFMATPHNTALPESYTTNFMIKTLLLTALFLWIRTAYPRLRYDQLMHLLWKKFLPLTLALCMWYISLPTLTSSI-P-PQT--MNP-IAHLFISLTILMGTMIAMFSSHWFLIWMGLELNMLAIVPTLAKSTNPR-STEASTKYFLVQATASMIFLMTTLLNYLSSGQW--TINPFLHQTLSTTMLIALMMKLGMAPLHFWLPEVTQGIPLAPTMLILTWQKLAPMSIITQIYPSMNLNILLTI-SILSIMVGSWGGLNQTQLRKILAYSSITHMGWMMAVLFHDPNITMLNLLIYILLTIPMLLIFNLNSNMTALSL---SHTWNKFTWMMPMFPMMMMSLGGLPPLTGFSPKWAIMQELTKNSNPTLPLTIAMLTLMNLYFYMRLTYSISMTMFPTSNNTKINW-QLKHMKLTPLM-------APLMVSSMFLLPTMPLMLLM----MY-LTLSLLTSISLTLLLIIITFWIPQFNLYLEKYNPYECGFDPTTSAHLPFSMKFFLVAITFLLFDLEIALLLPLPWTMQTNNLMLTINVILILLIILALGLAYEWTQEG--LDWTQ-MPFMYINVTLAYLMSLLGLSIYRSHLMSSLLCLEGMMLSLFIMTTLMTLNLHLVLMYMMPIALLVFAACEAAVGLALLVLISNLYGLDYVQNLNLLQCMLKIILPTTMLFPMMWLSKDHMLWINMMLWSLLISTLTL-MLLYMPN-NPYNLS-LISFSDPLTAPLLVLTTWLLPLMTLATQHHLYHNSPSRKKVYISMLILLQISLIMTFTATELILFYILFETTLVPTLIIISRWGYQPERLHASSYFLFYTLMGSLPLLITLLFYLDNLGSLNMLTMMIKTKELL-PSW-----TNNIMWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRIIPILNS-LTEKMNYPFLILSLWGMTMTS--LICLRQADLKSLIAYSSVSHMALVILAILIQTPWSFTGAMILMIAHGFTSSMLFCLANSNYERIHSRTMTFTRGLQTLFPLMGLWWLLANLANLALPPAINLVGELLTIVSSFSWSNFTIMFTGLNMLITALYSLHMYASTQRGPLTYSTSNMKPMFTRENTLMFMHMTPILLLTLSPKVIMGPSP-------MMHFSI-TLMTLISLLAPILAT---LINPNKS-TLYPYYVKLA-IIYALITSTLSMMFFILTGQESMISNWHWMTIQTIKLSLSFKMDFFSIMFTPVALFVTWSIVEFSMWYMSSDPNMNQFLKYLLIFLITMLILISSNNLFQLFIGWEGMGIMSFLLISWWYGRTDANTAALQAILYNRIGDIGLILAMTWSILYSNSWDFQQMFILNST-PNTFPLMSLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLIIRFYPMTENNPLIQTLTLSLGAITTLFTAICALTQNDMKKIVAFSTSSQLG--LMMVTVGINQPHLAFLHICTHAFFKAMMFLCAGSIIHSLNNEQDIRKMGGLLKTLPLTTSSLTIGSLALMGTPFLTGFYSKDLIIEAANTSYTNAWALTTTLVATS-LTAMYSIRIMFYTLTGYPRFTTLISINENNPLLKNPINRLAVGSIFAGFLISNCVLPASCPQITMPYYIKLTALGTTTLGLLLAMELSLMTNNVK--LSTPVKTYYFSNMLGFYSTTTHRLKPHSSLATSQNFASALLDLLWLEKSMPKMTAQTQSSIST--ATSTQKGLIKLYFLS---FLITP--TLALLLTI----------------- +>Rattus_leucopus_mottle-tailed_rat +----MNENLFASFITPT-VMGLPIVVTIIMFPSILFPSSE-RLISNRLHSFQHWLIKLIIKQMMLIHTPKGRTWALMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVILGFRHKLKNSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTMLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIVSSM-ITLFILFQLKISSQTFPA-APSPK-IMATEKT-NNP-W-ESKWTKIYLP-LS-LPQQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVLVMIFMIWEAFASKREVLSVSYSSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAYPFQLGLQDATSPIMEELTNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINSPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTSDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMT----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHYNSTILLSLGLLTNILTMYQWWRDIIREGTFQGHHTPIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMNQALLITILLGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIICLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTNIRKSHPLIKIINHSFIDLPAPSNISSWWNFGSLLGVCLMIQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASTFFICLYLHVGRGMYYGSYTFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLNSNADKIPFHPYYTIKDLLGVFMLLLFLMTLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAFLPFLHTSKQRSLTFRPITQTLYWILAANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIEDKML---KWN-------MY--------FINILTLLAPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPTLSLTLALSLWVPLPMPHPLINLNLGMLFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSYSLQMLITTQEHIWLLFPAWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTSIVFLGPLHYINHPELYSINFMTETLLLSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVFLAGI-P-PYT--MNP-ITLIIIYFTIFMGPVITMSSSNLLLMWIGLEVSLLAIIPLLTNKKSPR-STEAATKYFLTQATASMILLLAIMLNYKQSGVW--MFQQQTNNMLLNMTLISLAMKLGLAPFHYWLPEVTQGIPMHIGLILLTWQKIAPLSILYQIYHLLNPTITTTL-AIASVFIGAWGGLNQTQMRKIMAYSSIAHMGWMMAILPYNPNLTLLNLMIYILLTTPMFISLMMSSATTINSF---SLTWNKTPMILAITSIILLSTGGLPPLTGFLPKWTIISELLKNNCSILSTLMAIMALLNLFFYTRLIYSVSLTMFPTNNNSKMIS-HHTNLKYNLIL-------PVLTVLSTLTLPLSPQLMT-----MN-LFIIITINITLSFILVTIAFWLPQMNIYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAVQTTNITTMMTTAFILITILSLGLSYEWTQKG--LEWTE-MTSAFLNLTLAFTLSLLGTLMFRSHLMSTLLCLEGMMLSLFIMASTSTLNSNSMISMTIPITILVFAACEAAVGLALLAKISNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLTWLSSNKKIWTNVTSYSFLVSLTSL-SLLWQNDENYLNFS-ITFSSDPLSTPLIILTTWLLPLMILASQNHMKKENLLHQKLYISMLISLQILLIMTFSTTELILFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALISIQNSVGTLNFLILSLTTQPLS-PTW-----SNNIMWLACMMAFMVKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRVSIILDP-LTKSLAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAIMIQTPWSFMGATMLMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMIFPLMATWWLLASLANLALPPLINLMGELFIVMATFSWSNPSIILTAMNIVITGMYSMYMIITTQRGKLTNHMNNLQPSHTRELTLMALHIIPLMLLTINPKLITGLTM------MNMMTSS-ILMILALLTAPIIIS---MTNLPKL-IDFPSYATSS-IKFSFYLSLLPLLLFFHYNTEYMITNWHWLTINSIKLNMSFKIDYFSILFLSVALFVTWSIMQFSSWYMHSDPHINRFIKYLMLFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRVGDIGFILAMTWFCLNMNSWELQQIFLT-NN-NSLVPLMGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFHPLTSNNSTIMTAMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGSMMKVMPFTSSCLIIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALMVTLIATS-MTAMYSMRIIYFVTMTKPRYSPLITINENNPNLINPIKRLALGSITAGFLISLNIPPTNIQILTMPWHLKMTALFITILGFTIALELNNLTLNLSSTTTKTTRPSLFSTSLGYFPSIVHRAIPQKTLDSSYKMSLNLLDLIWLEKTIPKSTSITHTHLSK--MMANQKGLIKLYFLS---FLVTI--LLIFILHTL---------NPEWFQ- +>Zalophus_californianus_California_sea_lion +----MNENLFTSFTSPT-MMGLPIVTLIILFPSMLFPSPG-RLINNRLTSIQQWLIQLTSKQMMLIHNHKGQTWTLMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVAMGLRTKTKASLAHFLPQGTPFPLIPMLVIIESISLLIQPMALAVRLTANITAGHLLIHLIGGATLALIN-ISAITALITFIILTLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTIVSMI-LTLFIVFQLKISKHHFPM-SPELK-PLSTSKT-NIP-W-EKKWTKIYSP-LS-LPLQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSLVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFMLDSTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFMIWEAFASKREVETVELTSTNMEWLHGCPPPYHTFEEPTYIML-K--------MAYPFQMGLQDATSPIMEELTHFHDHTLMIVFLISSLVLYIISTMLTTKLTHTNTMDAQEVETVWTILPAIILIMIALPSLRILYIMDEINNPSLTVKTMGHQWYWTYEYTDYEDLSFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVIESVPLSCFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTHLLLLGLMTNTLTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALSITILLGLYFTLLQASEYYETSFTISDGIYGSTFFMATGFHGLHVIIGSTFLTVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKVHPLAKIINSSLIDLPTPSNISAWWNFGSLLAACLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTLTETWNIGIILLFTIMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFMASALVMVHLLFLHETGSNNPSGISSDSDKIPFHPYYTIKDILGTLLLILTLMLLVMFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRGMMFRPISQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFTILLVFMPIAGIIENNIL---KW--------MI--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSTSMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIIMMNILTTTLFLGAFHSPYMPELYTINFTLKTLTLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMTLPVITASI-P-PQT--MKP-PIFIMIMTTVVSGTMIVLTSSHWLMIWIGFEMNMLAIIPILMKNFNPR-ATEASTKYFLIQATASMLLMLGIIINLTTSGQW--TILKPPNPMASNLLTIALAMKLGMSPFHFWVPEVTQGTPLSSGMILLTWQKIAPLSILYQIEPSINPNLLTTM-AIASVLVGGWGGLNQTQLRKILAYSSIAHMGWITIIMVYNPTLTLLNLTIYITMTLGTFMLFMHSSSTTTLSL---SHTWNKLPLMTSLILVLMLSLGGLPPLSGFVPKWLIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTLFPSTNNMKMKW-QFENTKKMALL-------PPLIIISTMLLPMTPMMSILD---MN-MILALLTNTILASLLVLIAFWLPQLNIYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHANNLTNTLTMALMLISLLAASLAYEWTEKG--LEWTE-MSMMYFNIFMAFTVSLVGLLMYRSHLMSSLLCLEGMMLSLFVMMSVTILNNHFTLASMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTIMLMPMTWMSKPHMIWINTTTYSLLISLTSL-PLLSQPNDNSLNSS-LLFFTDSLSAPLLTLTTWLLPLMLMASQFHLSKEPLARKKLYITMLILLQLFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYMQNNMGTLNFLMAQYWTQALP-NSW-----SNILLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-LTSFMAYPFMMLSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILVQTPLSYMGATALMIAHGLTSSMLFCLANSNYERTHSRIMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELLVVMASFSWSNATIILMGVNITITALYSLYMLITTQRGKHTHHIKNIKPSFTRENTLMMLHLMPLLLLSLNPKLILGPLY------MNLFASF-IIMTLSMLTMPIILT---STPIYES-KLYPQYVKTT-IFYAFMTSMIPTTMFISSGQEMVISNWHWMTIQTMKLSLSFKLDYFSMIFVPVALFVTWSIMEFSMWYMTSDPHINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRSDANTAALQAILYNRIGDVGFIMAMAWFLINLNTWDLQQIFMIHHD-NLNMPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNMMMQTITLCLGAITTLFTAVCALTQNDIKKIIAFSTSSQLG--LMIVTIGIGQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKPMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSNTNAWALLLTLMATS-MTAAYSTRMMFSTLLGQPRFNATISVNESNPLLINPIKRLLLGSIFAGYLMTLNIPPTTIPQLTMPHHLKLTALTVTLLGFVLALELSTTSLNLK--FKHASDLSKFSNLLGYFPTIIHRLVPTMNLAASQKLASTLMDMIWLEYLLPKSISHLNMKSSI--TISNQKGLIKLYFLS---FMITL--TLALILTT--------ANFHE---- +>Ovis_ammon_argali +----MNENLFASFITPM-MFGLPLVTLIVLFPSLLFPTSN-RLVSNRLISLQQWMLQLVSKQMMSIHNTKGQTWTLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGLRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-INITTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LALFIIFQLKISKHNFYH-NPELM-MTKAPKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMALLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRYHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGAILLILTLMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLMIMPLLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVMMPVASIIENNLL---KW--------MF--------MINVLTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IILIIILTTVMLGTIIVMISTHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPMASMLMTTALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILIL-SILSITIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKAPIMTILVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPTTKRMTLL-------PTMTVLSTMLLPLTPILSILE---MN-LMITLLTNFTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWIQKG--LEWTE-MSLVYMNIMMAFMVSLTGLLMYRSHLMSSLLCLEGMMLSLFILATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINTTLHSLLISLTSL-LLLNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLARKKLFISMLILLQLFLIMTFTATELIFFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTMGSLNFLILQYWVQPMP-NSW-----SNTFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITLLLNP-ITDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKHTHHINNILPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSL-TLVTLILLTAPIAAI---NFNTHKS-TNYPLYVKTT-ISCAFITSMIPTTMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDFFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLINLNTWDLQQIFMLNPN-DSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAMTTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLININENNPFLINSIKRLLIGSLFAGFIISNNIPPMTIPQMTMPHYLKMTALTVTILGFILALEISNTTHYLK--FNYPSNTFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLETILPKTISLAQMKMST--TITNQKGLIKLYFLS---FLITI--LISTALL----------NFHE---- +>Mustela_putorius_European_polecat +----MNENLFSSFTTPT-MMGLPIVILITMFPSIMFPSPN-RLINNRLISIQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTVTAMITFSILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-VTLFFMFQLKLSKYNFPE-NPEPK-LVATSKS-TTP-W-EKKWTKIYFP-HS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMLGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLVIFSLHLAGVSSILGSINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDVWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVLTVELTSTNIEWLHGCPPPYHTFEEPTYVLS-K--------MAYPFQMGLQDAASPIMEELLHFHDHTLMIVFLISSLVLYIISVMLTTKLTHTSTMDAQAVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTIMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLTTSGLAMWFHYNSLSLLTLGTTANVLTMYQWWRDVVREGTFQGHHTPTVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITISLGLYFTVLQASEYYEAPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLSYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLTKIINNSFIDLPAPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYMFTETWNIGITLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALLLILMLTLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFMILLVLMPIISIIENNML---KW--------ML--------MINIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFVMAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHTPYLPELYSINFTMKTLLLTTSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASI-P-PQT--MKP-PILTIIMFTIISGTIMVLMSSHWLTIWIGFEMNMLAIIPILMKKFSPR-AIEAATKYFLTQATASMLLMLGIIMNLLLTGQW--TALNILNPIVSNMMTVALSMKLGLSPFHFWVPEVTQGIPLMSGMILLTWQKIAPLSVLYQMAPSMNTHLLMIM-AFMSVLIGGWGGLNQTQLRKILAYSSIAHMGWMIAVTTYNPTLMLLNLTIYIMMTLGTFMLFTFSSSTTTLSL---SLTWNKLPLITSLILIIMLSLGGLPPLSGFMPKWMIIHELTKNNMITAAMFMTITALLNLYFYMRLTYATALTLFPSTNNMKMKW-QFESTKYTTLL-------PPLIVMSTMLLPLTPMMPTLF---MN-MMLTMLINVSLASLLILIAFWLPQLNVYTEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSINLKTTLTMALALISLLAASLAYEWTEEG--LEWSE-MSVVYINIFLAFTLSFMGLLIYRSHLMSSLLCLEGMMLSLFVMMTVTILANHFTLASMTPIILLVFAACEAALGLSLLVMISSTYGTDYVQNLNLLQCMLKIIIPTMMLILLTWLSKPNMIWINTTAHSMLISLISL-TYLNQLTDNSLNFS-LLFFADSLSTPLLVLTTWLLPLMLMASQHHLSKETLTRKKLYITMLVMLQLFLIMTFTATELIMFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLWLQNNLGTLNLLIMQYWAQPLP-NSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMLLNP-LTSYMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAVLIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLVGELFVVMASFSWSNITIALMGVNITITALYSLYMLITTQRGKCTHHIKNIKPSFTRENSLMALHLLPLLLLSLNPKIILGYIY---MKVINLLTSS-VLVTLLMLTFPIMMT---STTMYAN-KSYPQYVKTA-TSYAFVISLIPTMMFLHLGQDTMISNWHWITIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGLILAMAWFLMNLNTWDLQQIFMTSNE-NLTIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEYNKTIQTITLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSCTNAWALLLTLVATS-MTAAYSTRIMFFALLGQPRFNPIITINENNPLLINSIKRLLFGSIFAGFLISHNLTPTTTPQMTMPHYLKMMALAVTILGFILALELNLTMQSLK--FKYPTNLFKFSNMLGYFPTIIHRLMPKTNLLMSQKSASTLLDMIWLEKILPKSISHFQMKSSM--IISSQKGLIKLYFMS---FMLTL--TLSLLTL----------NFHE---- +>Bos_javanicus_banteng +----MNENLFTSFITPV-ILGLPLVTLIVLFPSLLFPTSN-RLVSNRFVTLQQWMLQLVSKQMMSIHNSKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFTILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKVSKHNFYH-NPELT-PTKMLKQ-NTP-W-ETKWTKIYLP-LL-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPAYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMTLLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG---MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMAIAMVHLLFLHETGSNNPTGISSDVDKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILALIPLLHTSKQRSMMFRPLSQCLFWALVADLLTLTWIGGQPVEHPYITIGQLASVLYFLLILVLMPTAGTIENKLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSASMFILAPIMALGLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLITTQEQMWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTAILFLGTSHNPHMPELYTINFTIKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILTSGI-P-PQT--MNP-IIFIIILLTIMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKNHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNLILTL-SVLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTMFMANSTTTTLSL---SHTWNKTPIMTVLILATLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFPLMKKMTFL-------PTMVVLSTMMLPLTPMLSVLE---MN-LMLALLTNFTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTANLNTMLTMALFLIILLAVSLAYEWTQKG--LEWTE-MSMVYMNIMMAFTVSLVGLLMYRSHLMSSLLCLEGMMLSLFVMAALTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWLSKNNMIWVNSTAHSLLISFTSL-LLMNQFGDNSLNFS-LLFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVH-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNP-MTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVNMVITALYSLYMLIMTQRGKYTYHINNISPSFTRENALMSLHILPLLLLTLNPKIILGPLY------MNMFSSL-SLVTLLLLTMPIMMM---SFNTYKP-SNYPLYVKTA-ISYAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPS-DSNMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQMTMPYYLKTTALIVTILGFILALEISNMTKNLK--YHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKAST--LVTNQKGLIKLYFLS---FLITI--LISMILF----------NFHE---- +>Bos_gaurus_gaur +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSS-RLMNNRFMTLQQWMLQLMSKQMMSIHNSKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKISKHNFYH-NPELT-SAKMLKQ-NTP-W-ETKWTKIYLP-LL-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSTTLLTIGLTTNMLTMYQWWRDIIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITITLGIYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGVCLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITAIAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGTLLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILILIPLLHTSKQRSMMFRPLSQCLFWTLVADLLTLTWIGGQPVEHPYITIGQLASIMYFLLILVLMPTAGTVENKLL---KW--------MF--------MINILMLVIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSTSMFILAPILALGLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLIITQEQMWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTAILFLGTSHNPHMPELYTINFIIKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILTSGI-P-PQT--MNP-IIFTIILSTIMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKNHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SILSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLTIYIIMTSTMFTMFMANSTTTTLSL---SHTWNKTPIMTVLILATLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFPLMKKMTFL-------PTMVVLSTMTLPLTPMLSVLE---MN-LMLALLTNFTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIILLAVSLAYEWTQKG--LEWTE-MSMVYMNIMMAFTVSLVGLLMYRSHLMSSLLCLEGMMLALFVMAALTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLIWLSKGSMIWVNSTAHSLLISFTSL-LLMNQFGDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYIQNTVGSLNFLMLQYWVQPMH-NSW-----SDVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLILNP-MTDSMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELLVVMSTFSWSNTTIILMGVNMVITALYSLYMLIMTQRGKHTYHINNISPSFTRENALMSLHMLPLLLLTLNPKIILGPLY------MNMFSSF-SLITLLLLTMPIMMM---SFNTYKS-SNYPLYVKKT-ISYAFITSMIPTMMFIHSGQELVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNAWDLQQIFMLNPN-NSNMPLTGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLSNEQDIRKMGGLFKAMPFTTTALIAGSLALTGVPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALMGQPRFPTLININENNPFLINSIKRLLIGSLFAGYIISNNIPPTTVPQMTMPYYLKTTALFVTILGFILALEISNMTKNLK--FSYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLTQMKAST--LVTNQKGLIKLYFLS---FLITI--LISMILF----------NFHE---- +>Echymipera_rufescens_australis_ +----MNENLFAPFITPT-ILGVTTLPIIMFFPCLILTTPK-RWLPNRIQMLQMWLIRLITKQMMMMHNKQGRSWALMLMSLILFIASTNLLGLLPYSFTPTTQLSMNIGMALPLWMGTVLMGFRNKPKASLAHFLPQGTPTPLIPMLIIIETISLFIQPIALAVRLTANITAGHLLIHLIGSATLALTS-ISISISAITFIILFLLTILELAVAMIQAYVFTLLVSLYLHDNSMPQLDTSTWLLVIFLMI-MALFCVYQLKMLNQKMISIIPTTNNMILTTKT-QLP-W-EKKWTKIYLP-HS-SPLQF---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDMWAKIHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIISSIGSFISLTAVILMIFIIWEAFASKREVSSVELTTTNIEWLYGCPPPYHTFEQPVFIKL----------MPYPAQLGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYIIIVMLTTKLTHTSTMDAQEVETIWTIMPAVILVLIALPSLRILYMMDEIFNPYLTVKAMGHQWYWSYEYTDYEDLTFDSYMIPTNELSPGQLRLLEVDNRVVLPMELPIRMLISSEDVLHAWAVPSLGLKADAVPGRLNQVTLTSTRPGVYYGQCSEICGSNHSFMPIVLEMTTLKYFEKWSSMMQS---------MTHQTHAYHMVNPSPWPLTGALSALLLTSGMIMWFHFNSSFLMMIGLTCLFLTMYQWWRDIIREGTFQGHHTPVVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLAPTPELGGCWPPVGIYPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQMIQALTITIILGLYFTILQAMEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCLLRQFHFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKTXPLMKIINNAFIDLPAPSNISTWWNFGSLLGICLVIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNLHANGASMFFXCLFIHVGRGIYYGXYLFKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAAMAIVHLLFLHETGSNNPSGLNPDSDKIPXHPYYTIKDALGFLMMILILLLLAMFTPDMLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLLIIPLLHXXKQRSLMFRPISQMLFWLLTADLFILTWIGGQPVEQPFIIIGQVASIMYFMIILALMPLAGLIENYMLK-PKW--------MF--------IINLLLYIIPILLAVAFLTLIERKVLGYMQFRKGPNVVGPYGLLQPFADAVKLFTKEPLRPLTSSISMFIIAPILALTLALTIWIPLPMPYSLIDLNLGLLFILAMSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKTLITTQENMWLIFTTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIVMNAMTTILFLGTSINQNFTHLHTLSFMMKTMALTMMFLWIRASYPRFRYDQLMHLLWKNFLPITLACCLWFISVPIALSCI-P-PQI--MSP-YIMLIISFSLLLGTSITLLSNHWLMAWMGLEINTLAVIPMMTYPNNMR-NTESAIKYFLMQATASMIIMFAIIYNAWMTNQW--TLFQISNEWATMFMTLALAMKLGLAPFHFWVPEVTQGIPLTSGMILLTWQKIAPTSILYQISPSLNMNLLATM-AISSTLLGGWGGLNQTHLRKILAYSSIAHMGWMTIIALINPTLTILNLLIYFAATLTMFLSLNMMSITKINAL---SNLWNKSTPMTIILLITLLSLGGLPPLTGFMPKWLILQELSMHNNITMATLLALSALLSLFFYMRIIYTSALTMFPSTNLSKFQW-FYPTTKSTFMI-------PSLTIISAMLLPLSPLIIVLT---MN-LMXTLLINTSLATIIVIIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQLPNTNTMLILSYCLILLLTAGLAYEWMQKG--LEWTE-MAPINLNLMLAFSLALLGVLVYRTHLMSTLLCLEGMMLSLFILMALLISHFHMYSLSMAPLILLVFSACEAGVGLALLVKISTNYGNDYVQNLNLLQCMLKILLPTAMLIPTTWYSNKKWVWTNSTLHSLLISIISL-PLLYHYSDLGWNFN-SSFSLDSLSSPLIVLSCWLLPLMIIASQNHLNKETLTRKKLYLTMLIILQLSLIMAFSSSELIMFYILFETTLIPTLIIITRWGNQSERLNAGLYFLFYTLAGSLPLLIALLYLYNKLGSMHILTILLTAKDMN-LTL-----SNSILWYACMLAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITILTHP-STMTLCYPFIILSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMGLVIIAALMQSTLSFMGATTXMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQMMLPLMCTWWLLASLANLALPPSINLLGELMVIVSSFSWSNFSIILLGINTVITAMYSLHMLITSQRGKFTHHMYPINPSFTREHLLMTLHMIPLLIIMISPKFILGPTY---MKVINYLMNSFLILSIIILTFPLIIN---LYAPHKI-NNFPSYCKNM-IKMSFFISLPPLLLFMYSGLESTVTNWQWFSISSFNLNMSFKLDYFSIIFIPIALYVTWSILEFSLWYMHADPNIHRFFKYLITFLFTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWYGRTDANTAALQAILYNRIGDIGFMLSMAWLMINSNSWDLQQIFLTDMN---TLALLGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPVTKTNTTILTIALCLGAITTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLTILPITSSALMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALLITMIATS-LTAVYSMRIIYFALLNQPRFLPLSPLNENNPNLINPIMRLALGSIFAGFILTMNIPPTSMISMTMPTITKLSALLVTITGLLIAMELNSLSNKLP--TTNMIHTHNFSNMLGYFTHIFHRIYPLANLHMGQHIATMLIDLNWFEKTGPKGQANIHSSLSS-SISSTQKGMIKTYFLS---FIVSI--LLILLII------------------ +>Bison_bison_American_bison +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLVNNRFVTLQQWMLQLVSKQMMSIHNPKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIVLILLTVLEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKISKHNFHY-NPELT-STKMLKQ-NTP-W-ETKWTKIYLP-LL-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPFLTVKAMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTALLMIGLTTNMLTMYQWWRDIIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITITLGIYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG---MTNLRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGMCLTLQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMAIAMVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGALLLILALMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILALIPLLHTSKQRSMIFRPLSQCLFWTLVADLLTLTWIGGQPVEHPYIIIGQMASIMYFLLILVLMPTAGTIENKLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSASMFILAPILALGLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLIITQEQMWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNMFTAILFLGTSHNPHMPELHTINFIIKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILTSGI-P-PQT--MNP-IIFTIILLTIMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKNHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNLILTL-SILSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTMFMANSTTTTLSL---SHTWNKTPIMTILILATLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPLTKKMTFL-------PTMVVLSTMTLPLTPMLSVLE---MN-LMLALLTNFTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIILLAVSLAYEWTQKG--LEWTE-MSMVHMNIMMAFAVSLVGLLMYRSHLMSSLLCLEGMMLSLFVMAALTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWLSKGNMIWVNSTAHSLLISFTSL-LLMNQFGDNSLNFS-LMFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNMVGSLNFLMLQYWVQPVH-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLILNP-MTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATTLMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVMMSTFSWSNITIILMGVNMVITALYSLYMLIMTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-SLVTLLLLTVPIMMT---SLNTYKS-SNYPLYVKTT-ISYAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSFKMDYFSVMFVPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLDPD-NSNMPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSMIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFSTLININENNPFLINSIKRLLIGSLFAGYIISNNIPPTTVPQMTMPYYLKTTALIVTILGFTLALEISNMTKNLK--FHYPSNTFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKAST--LVTNQKGLIKLYFLS---FLITI--LISMILF----------NFHE---- +>Urotrichus_talpoides_Japanese_shrew_mole +----MNENLFASFITPT-MMGLPIVILIIMFPTILFPEPN-RLINNRLISMQQWLIQLTSKQMMSIHNSKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISVATAMVTFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILATI-ITLFMVFQLKISKFIYPS-NPELK-SMKSLKH-NTP-W-ETKWTKIYSP-LS-LPLQ----MFINRWLFSTNHKDIGTLYMLFGAWAGMVGTALSLLIRAELGQPGALMGDDQIYNVVVTAHAFVMIFFMVMPILLGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIGGFVHWFPLFTGYSLSETWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFASKREVSTVELTTTNIEWLHGCPPPYHTFEEPTYVNS-K--------MAYPFQFGFQDATSPIMEELLNFHDHALMIAFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMVPTTDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKYFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSSTLLCLGLLANSLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTHELGGFWPPAGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQALFITIALGVYFTILQAAEYYEAPFTISDGVYGSTFFMATGFHGLHVIIGTTFLTVCFIRQLKYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKTHPLMKIINNSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMFMETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFVIAALAGVHLLFLHETGSNNPSGLTSDSDKIPFHPYYTIKDILGVLILILVLSSLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILALMPLLHTSKQRSMMFRPISQCLFWLLVADLFTLTWIGGQPVEHPFIIIGQLASILYFMLILVLMPIASLVENNLL---KW--------MF--------LINLLALIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSISMFIIAPILALTLALTMWIPLPMPYPLINMNLSVLFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMSGSFSLSNLIVTQEYTWLLLSSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNVLTTILFLGAFHSPHMPELYSINFTVKALILIISFLWVRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSFPIFLSGI-P-PQT--MNP-LVFSTISLTVALGTTIVLISSHWLMIWIGFEMNMLAIVPMLMKKFNPR-SMEAATKYFLTQATASMLLMLAIIINLTYSGQW--TTMKMLSPIASTMMTIALIMKLGMAPFHFWVPEVTQGVPLMSGMILLTWQKIAPLSVLIQMAYSLNTNLLLTT-AILSIAVGGWGGLNQTQLRKIMAYSSIAHMGWMAAILTYNTTMTSLNLIIYILLTITVFMLLHFNSSTTTLSL---SHLWNKMPMISTLILTTMLSLGGLPPLSGFIPKWMIIHELTKNNSIILPTVMAIMALLNLYFYMRLTYSTSLTLFPSTNNMKMKW-QFENTKNTPMT-------APLIIFSTMLLPLTPMLALLE---MN-MLLTIIINTLLSSILVLIAFWLPQLNTYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNDVKTVLTMALILISLLALSLAYEWTQKG--LEWTE-MSLVYVNVMIAFLISLLGLLMYRSHLMSSLLCLEGMMLSLFILGTIMILNIHFTLASMIPIILLVFAACEAAIGLSLLVMVSNTYGVDYVQNLNLLQCMLKIIIPTTLLLPLTWLSKNNMIWINTTLYSLLISLSSL-LYLNMPNENNLSFS-IMFFSDPLSTPLVVLTTWLLPLMLMASQFHLSNEHPIRKKTYISMLILLQVFLIMTFTSTELILFYILFEATLVPTLILITRWGNQTERLNAGMYFLFYTLVGSLPLLVALTYLQNSTGSLNITIMQLMANPMP-NKW-----SSSLMWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRISTILAP-HTNTMAYPFMALSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLMASLTNLALPPTINLIGELLVMLTTFSWSNITILLMGLNMVITALYSLYMLIQTQRGKHTHHIINIKPSFTREHALMALHMTPLLLLSINPKIILGPTL------MNMLTSS-LLLSLIILMIPIMMT---LTNKYKE-ANFPLYVKNT-IFYAFMMSMIPALMFIYSGQEAVISNWHWMTIHSMKLMISLKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPNMNRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLSMAWFLFNSNSWELQQIFMTESG-HNMLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLIENNTTILTLTLCLGAMTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTTSALITGSLALTGMPYLTGFYSKDLIIEAVNTSYTNAWALLITLIATS-LTAVYSTRIMFFALLGQPRFSTLILINENNPLLMNPIKRLLMGSIFAGFMISNNILPMTVPQMTMPLYLKLTALAVTILGFLLALELNNMTYYLK--FSTPNHSHKFSNQLGYFPIIMHRLIPKINLTMSQKSASMLLDLVWMENFLPKTVSYCQMMAST--LVSNQKGLIKLYFLS---FMITL--TLSMLLF----------NFHG---- +>Bos_primigenius_aurochs +----MNENLFTSFITPV-ILGLPLVTLIVLFPSLLFPTSN-RLVSNRFVTLQQWMLQLVSKQMMSIHNSKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFTILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKVSKHNFYH-NPELT-PTKMLKQ-NTP-W-ETKWTKIYLP-LL-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMTLLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMAIAMVHLLFLHETGSNNPTGISSDVDKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILALIPLLHTSKQRSMMFRPLSQCLFWALVADLLTLTWIGGQPVEHPYITIGQLASVLYFLLILVLMPTAGTVENKLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSASMFILAPIMALGLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLITTQEQMWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTAILFLGTSHNPHMPELYTINFTIKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILTSGI-P-PQT--MNP-IIFIIILLTIMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKNHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNLILTL-SVLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTMFMANSTTTTLSL---SHTWNKTPIMTVLILATLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFPLMKKMTFL-------PTMVVLSTMMLPLTPMLSVLE---MN-LMLALLTNFTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTANLNTMLTMALFLIILLAVSLAYEWTQKG--LEWTE-MSMVYMNIMMAFTVSLVGLLMYRSHLMSSLLCLEGMMLSLFVMAALTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWLSKNNMIWVNSTAHSLLISFTSL-LLMNQFGDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVH-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNP-MTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVNMVITALYSLYMLIMTQRGKYTYHINNISPSFTRENALMSLHILPLLLLTLNPKIILGPLY------MNMFSSL-SLVTLLLLTMPIMMM---SFNTYKP-SNYPLYVKTA-ISYAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPS-DSNMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQMTMPYYLKTTALIVTILGFILALEISNMTKNLK--YHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKAST--LVTNQKGLIKLYFLS---FLITI--LISMILF----------NFHE---- +>Myospalax_psilurus_ +----MNENLFASFSTPT-LMGIPIAIAIIMIPTILFSHSN-RIHNNRLVALQQWVIKLIIKQMMSIHSQKGRSWTLLLISLIIFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPLWAGTVLLGFRNKTKSALAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALLS-ISTPTALITFSILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFNMIMFSL-ITLFIIFQLKFSKLNFYM-TPISK-TFNFLKK-PNH-W-ELKWTKIYLP-LS-LPLH----MFITRWLFSTNHKDIGTLYLMFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVVVTAHAFIMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFIHWFPLFTGYSLNDTWAKIHFATMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSMGSFISLTAVLIMMFIIWEALASKREVESIELTTTNLEWLHGCPPPYHTFEEPVYVKV-N--------MAYPFQYGLQDATSPIMEELMHFHDHTLMIVFLISSLVLYIISLMLTTNLTHTSTMDAQEVETIWTILPAVILVLIALPSLRILYLMDEINNPVLTVKTLGHQWYWSYEYTDYEDLNFDSYMIPTSELKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKHFEEWSVSMTQ---------MTHQTHAFHMVNPSPWPLTGALSAFLLTSGLVMWFHFNSTILLLMGLTTNLLTMIQWWRDVIREGTFQGHHTPVVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGKRLHMNQALLITILLGLYFTILQASEYFETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLLVCLLRQFNYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLLKIINQSLIDLPAPSNISTWWNFGSLLGICLGLQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGIYYGSYNYLETWNIGIILLFALMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHETGSNNPTGLNSNADMIPFHPYYTIKDILGFIIMFLFLMILVLFTPDMLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILVLILMPLLHTSAQRSLMFRPIGQCLFWILVGDLFILTWIGGQPVEHPFIIIGQLASIMYFLIILVLMPLAGILENKIM---KL--------MP--------LINIMLMLLPILIAMAFLILIERKILGYMQLRKGPNVVGPYGILQPFADAIKLFIKEPLRPLSSSISLFIIAPTLALTLALSLWIPIPMPFPLANLNLGALFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMSGSFSLSSLIMSQEFSWFLLPTWPLAFMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIILMNALSTIIFLSALVLPTQPELFTLNFMTKTLLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISLPIIIASI-P-PYM--MNV-LALIIILLTIFLGSIITILSSHLILMWAGLEMSMLAIIPMLMYNYNPR-SMEAATKYFLTQATASMIFLLAIIMNYNNLGSW--ELHYNTQHYVFTLILLALMMKLGLAPFHFWVPEVTQGIPILSGLLLLTWQKIAPLAILFQIAYSINSTIVPIS-AVLSVFIGGWGGLNQTQMRKILAYSSIAHMGWMVAVTMYNPTMMILNLIIYMFLTTSMFITVYINTSTTISLM---TKTWNKSPLMISTTLIILLSLGGLPPLTGFLPKWMIIIELTKNNCIFMALSMTMMALLNLYFYTRLIYASSMTMFPSMNNMKTDI-HQSKNKNNLFL-------SPLIIISSLALPLSPIISTLY---MN-LIMALLTNITLAITLVTIAFWLPQLNVYSEKAGPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWASQSNNLTVTLMMALILILVLILGLLYEWMNKG--LEWTE-MSPVFLNLLLAFSLALLGTLLFRSHLMSTLLCLEGMMLSLFLMSSLISLNSQFSLAFIIPIIILVFAACEAAVGLALLVMVSNSYGTDYVQNLNLLQCMLKIVIPSIMILPLTWLSKNNMVWINTISYSFIISLASL-FTLNQHNDTSLNFS-TMSFSDSLSSPLIILTTWLLPLMLLASQNHLKKEPETYKKIYISLLSTLQILLILTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGMYFLFYTLIGSIPLLIALIHSYNTMGTMNFIMLNIQQPLNT-SSW-----SNHIMWLAFMMAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRISVLLDP-MNKSMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVMIQTPWSYMGATALMVAHGLTSSLLFCLANTNYERIHSRTMILARGMQTILPLMGTWWMLGSLANLALPPSINLIGELIIISSSFSWANSTIILMGMNILITAMYSLYMLITTQRGKTTHHTKNISPSHTRESTIMTLHILPIILLSLNPMFILGFPY------MNLIHSL-NFLILLTLMSPLLLS---LSNTTKM-INFPKYVTNS-IKMSFLISLMPLMSFLLLNNESTISNWHWITLNSMKLILSFKFDLFSILFIPVALFVTWSITEFSLWYMHSDPNLDRFMKYLLMFLMTMIILVSANNLLQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDVGFILTMVWFCVNSNSWDLQQIFMIHSNSTNILPMLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFFPLTNNNQTILTMMMCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLAKPLPFTSSCLTIGSLALTGIPFLTGFYSKDLIIEAMNTSYTNAWALIITLIATS-LTAVYSTRIIFFVIMSKPRFPPIVSINENNPQLKNSIYRLALGSIFAGFLISKLLPPTNTPIMTMPIYLKLTALFVTIMGFTIAMELNNLTFFLT--SKFSSPTHHFSSLLGFFPSTFHRFLPTKNLNLSQNIASNLMDLIWLEKVLPKTIAHLNISTSI--KISNQKSLIKLYFIS---FLITM--TLILTLYTT--------NYHE---- +>Cervus_elaphus_yarkandensis_Yarkland_deer +----MNENLFASFITPM-ILGLPLATLIVMFPSLLFPTSN-RLMNNRLISLQQWMLQLVSKQMMGIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKATLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGAALALMS-ISATMALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMIMSMF-LALFIIFQLKISKHNFHF-NPELM-LTKTQKQ-NAP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEELSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMTLLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGVCLILQILTGLFLAMRYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGILLLVLFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIIIGQLASVLYFFIILVLMPITSTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPVLPELYTINFTMKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFMSSI-P-PQT--MNP-IIFILILSTMMMGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEAAIKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMFMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFSSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTILVLITLLSMGGLPPLSGFMPKWLIIQELTKNDSLILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKRMTLL-------PTMVILSTMLLPLTPMLSILE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVALAGLLMYRSHLMSSLLCLEGMMLSLFVMASLTILNSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTHGLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNITGSLNFLVLQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVVSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-TLVTLLLLTIPIITT---SSDNHKA-SNYPLYVKTT-ISYAFITSMIPTMMLIYTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFALNPN-DSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNALALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTIPQLTMPYYLKMMALTVTILGFILALEISNMTQNLK--FNYPTNMFKFSNMLGYFPTIMHRLTPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQTKMSI--MVTNQKGLIKLYFLS---FLVTI--TVSMVLF----------NFHE---- +>Acinonyx_jubatus_cheetah +----MNENLFASFITPT-MMGLPIVMLIIMFPSILFPSPN-RLINNRLISLQQWLVQLTSKQMLAIHNYKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPIPLIPMLVVIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLALTN-ITVPAALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIMSMI-MTLFIVFQLKISKHLYPS-NPEPK-SMITLEQ-PNP-W-EKKWTKIYSP-LS-LPQQ----MFMIRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFMVWEAFASKREVAMVELTTTNLEWLHGCPPPYHTFEEPTYVLL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMVPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLMYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHYNSTLLLTLGMTTNLLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALLITISLGVYFTLLQASEYYETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLKYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIVNHSFIDLPTPPNISAWWNFGSLLGVCLVLQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGMYYGSYTFSETWNIGIMLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGITSDSDKIPFHPYYMIKDILGLLMLILMLTLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALMFSILILAIIPIFHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFSTLLVLMPISGIIENRLL---KW--------MF--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSMFMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLATLITTQEHTWLIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHNPYMPELYIVNFTVKTLFLTTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPIITASI-P-PQT--MKP-FIFIIIMTTVISGTIIVMTTSHWLMVWVGFEMNLLAIIPILMKKYNPR-AMEAATKYFLTQATASMILMMGIIINLLHSGQW--TVSKDLNPMASIMMTTALAMKLGLAPFHFWVPEVTQGISMSSGLILLTWQKIAPLSILYQISSTINPSLLLTM-SIMSVMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMMYNPTMMILNLTIYIIMTLTTFMLFMYNSTTTTLSL---SQTWNKTPLITSLILVLMMSLGGLPPLSGFTPKWMIIQELTKNEMIMMPTLLAMTALLNLYFYMRLTYSTALTMFPSNNSMKMKW-RFECTKKMTFL-------PPLIVMSTMMLPLTPMLSILD---MN-IMLALLTNTLLSTLLVLIAFWLPQLNIYAEKVSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLPTMLTMALMLISLLAVSLAYEWTQKG--LEWTE-MSMVYINIFLAFIMSLMGLLMYRSHLMSSLLCLEGMMLSLFIMMTMVVLNNHFTLASMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTAMLMPMMWLSKPNMIWINSTTYSLLISLVSL-SYLNQPGDNSLNSS-LLFFSDSLSAPLLVLTTWLLPLMLMASQSHLSKEILARKKLYITMLILLQLLLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNTMGTLNFLIIQYWAKPIS-TTW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-TTSQMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTILPLMAAWWLLASLANLALPPTINLVGELFVVVASFSWSNMTIILMGTNIIITALYSLYMLITTQRGKYTHHIKNINPSFTRENTLMTLHLLPLLLLSLNPKIVLGPIY------MNLSTSF-TLTAMFILLLPIIMS---NTRLYKG-NLYPHYVKTT-ISYAFTISMIPTMMFISSGQETVISNWHWLSIQTLNLSLSFKMDYFSIIFTPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMAMAWFLTNLNAWNLQQIFITQHD-NLNIPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQNKTMQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKPMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-LTAAYSTRIMFFVLLGQPRFNALNPINENNTYLINSIKRLLIGSIFAGYLISYNIPPMTIPQMTMPHHLKLTALAVTITGFILALELNLVAKNLK--LKYPSNLFKFSNLLGYFPTVMHRLPPKMSLTMSQKSASMLLDMIWLENVLPKSISYFQMKMST--TVSNQKGLVKLYFLS---FMITL--TLSLLLF----------NYHE---- +>Cervus_canadensis_songaricus_Tian_Shan_wapiti +----MNENLFASFITPM-ILGLPLATLIVMFPSLLFPTSN-RLVNNRLISLQQWMLQLVSKQMMGIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGAALALMS-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LALFIIFQLKISKHNFHF-NPELV-PTKTQKQ-NTP-W-ETKWTKIYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEELSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMTLLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINTRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFMETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGILLLVLFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIIIGQLASVLYFFIILVLMPITSTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPVLPELYTINFTMKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFTSSI-P-PQT--MNP-IIFILILSTMMMGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEAATKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMFMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTVLVLITLLSMGGLPPLSGFMPKWMIIQELTKNDSLILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPMLSILE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVALAGLLMYRSHLMSSLLCLEGMMLSLFVMASLTILNSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTHGLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNTTGSLNFLVLQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLVGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-TLITLLLLTIPIMAT---SSDNYKT-SNYPLYVKTT-ISYAFITSMIPTMMFIYTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFALNPN-DSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTVPQLTMPYYLKMMALTVTILGFIFALEISNMTQNLK--FNYSTNIFKFSNMLGYFPTIMHRLTPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQTKMSI--MVTNQKGLIKLYFLS---FLVTI--AVSMILF----------NFHE---- +>Colobus_guereza_mantled_guereza +----MNENLFTPFTTPT-ILGLPAVILIILFPTLLLPTSK-HIISNRLITIQQNLIQLIMKQIMTTHSAKGQAWSLMLMSLIIFITMTNLLGLLPHSFTPTAQLSMNLAMAIPLWAGTVITGLRFKTKSSLAHLLPQGTPTPLIPMLVIVETTSLFIQPVALAVRLTANITAGHLLMHLIGAATLTLST-ISLPAASLTLMLLVLFMILEVAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFTIIMTML-PTLYIIMQLKLLSTTYYP-SPPQK-LAKTKPR-NNP-W-QLKWTKIYLP-HS-QLQQS---MLVNRWLFSTNHKDIGTLYLLFGAWAGMMGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAAVEAGAGTGWTLYPPLAGNFSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTGAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLNQVCAKAHFMIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNIVSSTGSFISLVAMLLMVYMIWEAFASKRKILLIEQPTSNLEWLHGSPPPYHTFDEPVFIKI-K--------MAHPVQLGLQDATSPIMEELIAFHDHALMIVCLISFLVLYVLSSVLMTKLTNTNITDAQEMETIWTILPAIILILIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQAHPYHMVKPSPWPLTGALSALLMTSGLIMWFHFYSITLLALGLLTNLLTMYQWWRDIIRESTYQGHHTTPVQKSLRYGMVLFIISEIFFFTGFFWAFYHSSLAPTPHLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMEGNRKQMNQALFTTILLGVYFTLLQISEYYEAPFTISDGIYGSTFFIATGFHGLHVIIGSTFLIICLIRQLLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTSTRKSNPIMKMVNHAFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWVWGGYSIDKPTLTRFFTIHFTLPFIIVALTTLHLLFLHETGSNNPCGIISNSDKIPFHPYYTTKDILGLTLLLLLLMMLVLFLPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSKQQSMTFRPLSQLMLWLLTTTLITLTWIGSQPVNQPFIMIGQMASMTYFTTILILMPLASLTENKLL---KWT-------MF--------TTNLLLVILPIMAAMAFLTLTERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPSKPATSTTTLYVIAPALAFITALLLWTPLPMPNPLINLNLGLLFILAMSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIIMLSILLMSGSFNLHMLITTQEHLWLLLPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIIMMNALTAAIFLGTLYPIHSPELFTTCFTIKTLLLPSLSLWIRATYPRFRYDQLMHLLWKNFLPLTLALLMWYISMPIMTSGI-P-PQN--MNP-LAQLVIYSTMIMGTFITLLSSHWFLTWAGLEMNMLAFIPILTKKASTR-STEAATKYFLMQSTASMVFILAITYNNMLSGQW--TMTNKLNQLPSLAMTMALAMKLGMTPFHFWVPEVTQGTPLIPGLLLLTWQKLAPISIMYQIYPSINTSTLLIL-STLSIMAGSWGGLNQTQLRKIMAYSSITHMGWMMMTLTYNPNVTILYLATYIILTTTAFLALNLNSNTTTLML---SRTWNKLTWLMPLMAATLLSMGGLPPLTGFMPKWITIQELTKNNNFIIPTTMITMTLLNLYFYMRLIYTTSMTMLPAINNMKMKW-QFENMKPTLFI-------SPLIIFTTLLLPISPTTFTMF---MN-LVLILTINTLLTLMLMVIMFWLPQLNSYTEKTNPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLSTMIKSSMMLVTILTLSLAYEWTQKG--LDWAE-MPIIYMNIMLAFTISLLGMLIYRSHLMSSLLCLEGMMLSLFIMNTLMALNMHSPLTNIVPITLLVFAACEAAVGLALLVSISSTYGLDHIQNLSLLQCMLKMIFPTIMLLPMTWFSKNNMIWINLTTHSLIISLIPL-LFFNQTNSNLINYS-TYLSSDPLTTPLLMLTAWLLPLMIMASQYHLHNESPSRKKLYLSMMVFLQISLIMTFMATELILFYILFETTLIPTLIIITRWGVQAERLNAGTYFLFYTLTGSLPLLIMLLYTYNDLGSLNIMFLTLTTQKLT-STW-----SHNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTPILDP-LTEHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMASLIQTPWSFTGAIILMMAHGLTSSMLFCLANSNYERTHSRIMMLSRGLQTLLPLMAFWWFMANLTNLALPPTINLMGELLVVMASFSWSHVTIMLTGLNMLITALYSLYMYITTQRGSLTHHITNIKPSFTRENMLMFMHLSPIILLSLNPNIIMGLTP--------MHASI-IMLTLTSLTFPIIMA---LISPSKK-LTYPYYVKTT-MMFTFTLSLFPMTLFIFLDQDMIISNWHWTTIQSLELTLSFKLDYLSMMFTPIALFITWCIMEFSLWYMSSDPNIDQFFKYLLIFLITMLILITANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAAVQAVLYNRIGDIGFILAMAWFLLHYNSWDLQQMFILNSN-PSLLPLMGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNMLIQSLTLCLGAITTLFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHVCTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKTMPLTSTCLTVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALSITLIATS-LTSAYSTRTIIFTLTGQPRFSSSININENSLTLLNPLKRLAVGSMLAGFLITNNISPTTLPQLTMPYYLKYLALCGTALGFLMALDLTLMTNKLK--MNTPSHMFKFSNMLGYFPTTIHRMIPYQNLTMSQNMAFLLLDSTWLEKLMPKTITQIHITSST--IMTSQKGMVKLYFLS---FLIPL--ILTPLLMM----------------- +>Zaglossus_bruijni_long-beaked_echidna +----MNENLFASFITPT-ILGISILPLIMIFPCLLFSAPN-RWVPNRLVALQLWLIRMIAKQMMLIHNKQGRMWTLMLITLIMFIASTNLLGLLPYTFTPTTQLSMNMGMAIPLWLGTVLMGFRNKPKSSLAHFLPQGTPTPLIPMLIIIETISLFIQPVALAVRLTANITAGHLLIHLIGSATLALSS-ISLTVSTITFTILFLLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFMTIFLMI-FTIYGIFQLKVVKYLPTVLPTSSTQATP-VTK-LTP-W-NSKWTKIYLP-HS-LLLQS---MFINRWLFSTNHKDIGTLYLLFGAWAGMARTALSILIRSELGQPGSLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLVSSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGDIKWTPPMLWALGFIFLFTVGGLTGIVLANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLLSGFTLHTTWAKVQFTLMFVGVNLTFFPQQFLGLAGMPRRYSDYPDAYTLWNAISSLGSFISLTAVMVMIFMVWEAFASKREVLTVELTSTNVEWLHGWPPPYHTFEQPVYIKI----------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISTMLTTKLTHTNTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPNLTIKTMGHQWYWSYEYSDYEDLSFDSYMIPTQDLTTGQMRLLEVDNHLVLPIELPIRMLISSEDVLHSWALPSMGLKTDAIPGRLNQATITSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSSSMMSTS-------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLMMWFHFNNPTLLVLGLLTNLISSYQWWRDIVREGTYQGHHTKVVQKGLRYGMVLFIISEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGISPLNPLEVPLLNTSILLASGVSITWSHHSLMEGNRKQMIQSLMITIALGLYFTALQAMEYYESSFTISDGVYGSTFFVATGFHGLHVIIGTTFLITCLLRQFLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MHNPRKTHPLIKIVNHTFIDLPTPSNISSWWNFGSLLGMCLIIQILTGLFLAMHYTADTTTAFSSVAHICRDVNYGWLIRYLHANGASLFFICIFLHIGRGLYYGSYMNTETWNIGVLLLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFVVAALTIIHLLFLHETGSNNPSGLNSDSDKIPFHPYYSIKDLLGFFIATLVLMLLVLFTPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVASIMILALIPMLHTSCQRGLTFRPLTQTLFWILVTNLLTLTWIGGQPVEQPFIIIGQLASILYFLLITTFIPLAGLLENNLL---KW--------MF--------LINLLLLIIPILLAVAFLTLIERKILGYMQFRKGPNIVGPHGLLQPIADAVKLFIKEPLRPMTSSIYMFILAPILALSLALTIWVPLPMPLPLIDLNLGLLFVLSVSGLSVYSILWSGWASNSKYALTGALRAVAQTISYEVTLAIILLSIMLINGSFTLTTLNLTQEFMWLVVPTWPLMLMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIIMNALTVILFFGAYHLIFLPELSTINFMIKTMMLTSLFLWIRASYPRFRYDQLMHLLWKNFLPITLVTCLWYIMLPTTLSGT-P-PQM--MTP-VTNLIMMFSLLMGTVITLTSSHWLLMWMGLEINTLAIIPLLTSKKHPR-STESAIKYFLTQATASMLLMFAASLNTWLTGHW--TLMQVNNMVPSMIMTFALAMKLGLAPFHYWVPEVLQGSPLLSGMILLTWQKLAPISIIYQISPTLNMNTLLML-AISSILLGGWNGLNQTQLRKIMAYSSIAHMGWMVVIIIYFPLLTILNLVLYIMSTVALFTVFYHINITKTKPL---SLMWNKSPTLMLTTILVLLSLGGLPPLTGFAPKWLIVQELIMHNNIMMATTLAIMALLNLFFYMRIIYSSTLTTFPTTNNNKYHW-YKQPTKTPLSL-------PPLTVLTTALLPLTPMFITLG---MN-LLISLLINTCLATILVVVAFWLPQLYTYLEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIAILLPLPWASQTSSPYLLLGLSGILLSLLTLGLTYEWLQKG--LEWTE-MTTMFFNLLLAFMVALMGVYIYREHLMSTLLCLEGMMLSIFIMVSLTLLHHHLNSTMMFPLILLVFSACEAGVGLALLVKTSNSYGTDYIDNLNLLQCMLKILLPTVMLLPLISFSKKEWMWINSSAYSILISSLSL-LTLNQHMDLGLNFN-LNFFTDPLSSPLLVLSCWLLPLMILASQFHLMNESINHKRMYLILLVSLQIALLMAFSAVEFMMYYILFETTLIPTLIIIARWGNQTERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGSLHILLLTLTPNPLL-NSW-----SNDILWLACMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEP-ISKFMAYPFIILATWGMIMTS--SICLRQTDLKSLIAYSSISHMGLVVAASLIQTPWGFMGATAMMIAHGLTSSMLFCLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLTNLGLPPTINLISELMIIVSTFSWSNFTLILLGLNTVITAIYSLYMLISVQRGKMTTHSLSINPTFTREHMIMALHLLPLILLTLNPKLILGVAY------MKLMFTSTLLMSLIILLIPLLTS---FTPLYKL-TTYPHHVKNM-IMWSFTISLFPLLLFLNQGFESTVTNWHWFTSQTLGLTMNFKVDLYSIVFLPIALLVTWSIMEFSIWYMGSDPKINQFMKYLLIFLITMLTLISASNLFQLFIGWEGVGVMSFMLIGWWHARTDANTAALQAILYNRIGDIGFILAMAWLIMNSNSWELNQIFLLHMD---LLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFSPMFERNYVALTVALCLGAITTLFTAVCALTQNDIKKIIAFSTSSQLG--LMMVTVGLNQPFLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLVNILPITSSALIIGSLALTGMPFLAGFYSKDSIIESLNTSNANAWALCLTLVATT-FTAVYSTRLIFLALLNQPRFSPMSSINENNPLLINPIKRLAFGSIIAGFLLTSFINPTTLNPTTMPHYIKMAAITITLLGFLLALELYMAANNLT--HKPHSQIYSFSNLLGYFPLIIHRKPTTQNFSLSQGMATMLIDLTWFEKSGPKGISAQQMAFSS-SITETQKGLMKIYFLS---FLITP--LIIIMLFIT---------------- +>Globicephala_melas_long-finned_pilot_whale +----MNENLFASFMVPI-TLGIPITTLIIMFPTMLFPTPN-RLINNRMITIQQWLTKLTSKQLMVTHNPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTAQLSMNLGMAIPLWAGTVFIGFRNKTKMSLAHLLPLGTPIFLIPMLVMIETISLFIQPLALAVRLTANITAGHLLLHLIGSATLALMS-ISLFTALITFIILTLLVILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMI-FTLFALLQLKISKHFYSP-FPKPV-NTKLQKQ-QTP-W-NHTWTKIYLP-LS---------MFANRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQLYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAILLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMVSHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFTHWFPLFSGYTLNPTWAKIQFMIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVLIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFKEPVYVNL-KYS------MAYPFQLGLQDAASPVMEELLQFHDHALMIVFLISSLVLYIITLMLTTKLTHTNTMDAQEVETIWTVLPAVILIMIALPSLRILYMMDEINNPSLTVKAMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMVLPMQMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLTSTRPGLFYGQCSEICGSNHSFMPIVLELVPLEKFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSMILLTLSFLTNTLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEALFFTGFFWAFYHSSLAPTPELGGSWPPTGIRPLNPLEVPLLNTSVLLASGVSITWAHHSLMQGNRKHMLQALLITITLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIICFMRQMLFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINDTFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWFIRYLHANGASMFFICLYAHIGRSLYYGSYMFQETWNIGVLLLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITTLVAVHLLFLHETGSNNPMGIPSNMDMIPFHPYYTIKDILGALLLILALLTLTLFTPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILIFIPMLQTSKQRSMMFRPFSQLLFWTLIADLLTLTWIGGQPVEHPYIIVGQLASILYFLLILVLMPTVSLIENKLL---KW--------MF--------MINILTLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFMIAPVLALTLALTMWAPLPMPHPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLNTTQEKLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGAFHDPYTPELCTTNLIVKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTAGI-P-PQT--MNP-FISITLLTTLVLSTTIVTISSHWLFAWIGLEMNMMAIIPIMMKKPNPR-ATEASAKYFLTQATASSLLMLAIIINLMHSSQW--TIMKLFDPTASILMTMALAIKLGLSPFHFWVPEVTQGIPLSTGLILLTWQKLAPISILYQISPSVNLHLMITM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILPYNPTFTLLNLLIYITMTFTMFMLLIQNSTTTTLLL---SQTWNTMPIMTTFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPTLMAITALLNLYFYMRLVYSTALTLFPSTNNMKMKW-QFYSMKQMTLL-------PTAIVLSTMLLPLTPTLLTLL---MN-LLLTLLTNTTLALLLMLIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIAILLPLPWAVQTNNLTTMLLTALFLISLLAASLAYEWTQKG--LEWDK-MSLVHINILIAFTVSLTGLLMYRSHLMSALLCLEGMVLSLFILATLTILNTHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKSNFIWINTTAHSLLISFTSL-LLLNQFNDNSLNYS-LTFFSDPLSAPLLMLTMWLLPLMLMASQSHLLKEPLARKKLYITMLITLQILLIMTFTATELIMFYITFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALMYLQNTVGSLNFLLLQYWAQPLS-TSW-----SNTFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTEHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFFPLMTTWWLLACLTNLALPPTINLIGELLVIMSTFSWSNLTIILMGMNIVITALYSLYMLIMTQRGKHTHHINNLTPTFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSSTTLLTLLMLIAPIMMS---STDFYKN-NKYQHYVKNM-TLLAFITSLIPMMMFIHTNQEMLISNWHWITIHTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLHNTNAWDLQQIFTLNQN-PPILPLMGLTLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNKFIQTTMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMMTLGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALIIGCFALTGMPFLTGFYSKDLIIEAATSSYTNAWALLLTLIATS-MTATYSTRIIFFTLLEQPRFSPLMNINETNPMLINPIKRLLIGSIFAGFILSNSMPPMNTPLMTMPLYLKLTALMVTTLGFTLAFEINTYSKNLK--YPYPSDSTKFSTLLGYFPTIMHRLTPHLALTMSQKFATSLLDLTWTEMILPKTTALIQLKAST--LTSNQKGLIKLYFLS---LLITM--TLSMLLF----------NYPE---- +>Niviventer_excelsior_large_white-bellied_rat +----MNENLFASFITPT-MMGLPIVMAIIMFPSILFPSSE-RLINNRLHSFQHWLIKLIIKQMMLIHTPKGRTWALMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVILGFRHKLKNSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMD-ISPPTATITFIILLLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIVSSM-ATLFILFQLKISSQTFPA-APTQK-VVTTKET-KNP-W-ETKWTKIYSP-LS-LPQQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDMWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYSTWNTISSMGSFISLTAVLVMIFMIWEAFASKREVLSISYSSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAYPFQLGLQDATSPIMEELTNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMTPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSTTLLSLGLLANILTMYQWWRDIIREGTFQGHHTPIVQKGLRYGMILFIVSEIFFFAGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALFITILLGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIINHAFIDLPAPSNISSWWNFGSLLGMCLIVQIVTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGMYYGSYAFLETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGIFILLLFLMTLVLFFPDLLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILALLPLLHTSKQRSLTFRPITQTLYWILAANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIEDKML---KWNPV-PMV-MY--------FINILTLLVPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPTLSLTLALSLWVPLPMPHPLINLNLGMLFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQMLITTQEYTWLLIPAWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSSIVFLGPLYLINFPELYSINFMTETLFLSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISIPIFLAGI-P-PYT--MNP-ITLIIIYFSILMGPTITMASSNLLLMWVGLELSLLAIIPLLINKKNPR-STEAATKYFITQATASMIMLMTIVLNYKQLGTW--TFQQQTNNILLNLMLISLSMKLGLAPFHYWLPEVTQGIPIHIGLILLTWQKIAPLSILFQIFHLLNPTITTIL-AISSIFVGAWGGLNQTQTRKILAYSSIAHMGWMMAILPYNPNLMLLNLVIYIMLTIPMFIALMMNSTTTINSM---SLLWNKAPMILIMTSLILLSLGGLPPLTGFLPKWIIISELLKNNSSTMATLMAMMALLNLFFYTRLIYSTSLTMFPTNNNSKMMS-HHPNLKHNFIM-------STLTVMSTLTLPLSPQLIP-----MN-LFLIITINILLSLTLVSIAFWLPQMNIYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTTNTLTMTTTAFILVTILALGLSYEWTQKG--LEWTE-MTSALLNLTLAFTLSLLGTLMFRSHLMSTLLCLEGMMLSLFIMTSMSTLNSNSMISMPIPITILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIILPSLMLLPLTWLSKDKKFWTNVTSYSFLVSLLSL-TLLWQNDENHLNFS-ITFSSDPLSTPLIILTTWLLPLMILASQNHMKKEPTTHQKFYISMLVCLQTLLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALISIQNSMGSLNFLLLSLTTHSLH-LTW-----SNNILWLACMMAFLIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIAIILDP-LTKSMAYPFIMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIAAIMIQTPWSFMGATILMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMIFPLMATWWLLASLANLALPPLINLLGELFIVMSMFSWSNPSIILMASNIIITGMYTMYMIITTQRGKLTSHMINLQPSHTRELTLMALHIIPLVLLTINPKLIAGPML------MNMMTSS-ILMILILLATPIIIS---STNLTKI-INYPSYATSS-IKYSFFLSLLPLLLFFHYNTEYMITSWHWITINSVKLTMSFKIDYFSILFLSVALFVTWSIMQFSSWYMHSDPNINRFIKYLMLFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQIFLT-NS-SDLVPLSALLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFHPLTSNNSTILTAMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGNMMKTMPFTSSCFIIGSLALTGMPFLTGFYSKDLIIESINTCNTNAWALMVTLIATT-MTAMYSMRIIYFVTMTKPRYSPLIIMDESNPDLINPIKRLALGSIFAGFLISLNIPPTNIPMLTMPWYLKVTALLISIMGFAMALELNNLTLNFS--MKTTSKPASFSTSLGYFPSIIHRIIPQKTLNPSYKLSSNLLDTIWLEKTIPKSTSITHAYMSK--MMTNQKGLIKLYFLS---FLITI--SLIFTLYII---------SPEWFQ- +>Daubentonia_madagascariensis_aye-aye +----MNENLFASFITPT-IMGLPIVMLITMLPSMLFPTPS-HFINNRLISLQQRFTQLILKQLMATHNTKGRTWSLMLTSLILFIGSTNLLGLLPYSFTPTTQLSMNLGMAIPLWAATVITGFRHKTKSSFAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGSATLILTS-ISPAAASITFIILVSLTTLELAVALIQAYVFTLLISLYLHENTMPQLDTSTWPIIILSMI-LTLFIMLQLKTLKLVFPL-NPAPK-NMTTQKY-NNP-W-EMKWTKIYSP-LS-LPLQS---MFINRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWKPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSIGSFISLTAVMLMIFMTWEAFASKREVLTVELTTTNLEWLHGCPPPYHTFEEPAHVKN-L--------MAYPAQMGFQDATSPIMEELLYFHDHTLMIVFMISSLVLYTISLMLTTSLTHTNTMNAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTIKTMGHQWYWTYEYTDYENMTFDSYMTSTNDLTPGELRLLEVDNRMVLPTELPIRVLVSSEDVLHSWTVPSLGLKTDAIPGRLNQTTLMASRPGLYYGQCSEICGANHSFMPIVLELIPLKYFEKWLLTML----------MTHQTHTYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSSKLLSLGLLTNLLTMYQWWRDIIRESTFQGHHTPAVQKGLRYGMLLFIISEVFFFMGFFWAFYHSSLAPTPELGGCWPPTGVHPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGNRPHMLQALFITITLGIYFTVLQASEYMETSFTISDGIYGSTFFMATGFHGLHVIIGSTFLAICFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLIKIINNSFIDLPTPSNISSWWNFGSLLGTCLILQILTGLFLAMHYTSDTTSAFSSISHICRDVNYGWIIRYLHANGASMFFLCLFIHTGRGLYYGSFTYLETWNIGIILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSATPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIILTLATTHLLFLHESGSNNPSGISSNSDKIPFHPYYTTKDILGLTLLLLFLMTLTLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILTCIPLLHTAKQRSMAFRPMSQCLFWILTTDLLTLTWIGGQPVEHPFILIGQAASILYFSIIIILMPMTSLIENKML---KW--------ML--------MINLLSLIIPIMLAMAFLTLIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFTKEPLRPLTSFTPLYIIAPTLALSIALTMWVPLPLPYPLANMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVSMAIILLSILLMSGSFTLNTLNTAQEHTWMLIPSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTILFLGTTHNTLSPETFTTNFTIKTLLLSMAFLWVRASYPRFRYDQLMHLLWKNFLPMTLAMCMWHISLPISLSTI-P-PHM--MKI-PITTLILISLFMGTMLTMIGSHWFLIWAGLEINMLTIIPLMTKKTNPR-STEAATKYFLTQATASMLLMMAIIINVTNTGQW--SITKNPSQLTSTMMTIALAMKLGLAPFHFWVPEVTQGSPLFSGMILLSWQKLAPISIMLQMYESMNLNMMLAL-ALLSILFGGWGGLNQTQLRKILAYSSIAHMGWMTTILMYNPSATILNLTIYLMLTIATFSMFYLKSNTTTLML---ARLWNKNPMMTTMMFATLLSLGGLPPLTGFLPKWIIIQELTKNDNIIFPALMTMMTLLSLYFYMRLTYSTSLTSFPTTNSMKMMW-RTQTMKKTPFL-------YPLITVSTLALPLSPTFATLS---MN-LMLILTTNTLLALLLITIAFWLPQLNIYTEKYKPYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTTNLKLMFTMAMILIMILALGLTYEWLQKG--LEWAE-MPLISINLSLAFTTALLGVLMFRSHLMSSLLCLEGTMLSMFILTTLSTLNLHYNLSSTLPIILLVFAACEAAAGLALLVTVSNTYGLDYVQNLNLLQCMLKIIVPTIMLLPLTWYSNSLMLWINTTSYSLVISLTTL-LLLNQTNN--TNFS-LTFFSDPLSTPLLILTAWLLPLMIMASQFHLTKEPLPRKKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWGNQMERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKELP-NSW-----SNTLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEP-LTKHMIYPFLMLCIWGMIMTS--SICLRQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPPSINLIGELFVIMTTFSWSNFTIILTGLNVLITALYSMYMLTMTQRGKITYHTHNIKPSFTRENTLMSMHITPLLLLSLNPKTILGPTY------MNPFHTP-SLTSLIILMTPMVLV---MTKTHTK-DYYPYYMKTS-ISYAFTISLIPTLLFINSGQEAIISNWHWVTIQTLKLTMSFKLDYFSVVFIPVALFITWSIMEFSMWYMSNDPYINQFFKYLMLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFILTMAWFLMHSNTWDLQQIFMLNQT-PDTLPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLTENNKTIQTLTLCLGAMTSLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTMGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPLTSSSLIIGSLALSGIPFLTGFYSKDLIIETANTSNTNAWALLITLIATS-LTAIYSSRIIFFVLLGQPRFLITPTINENNNLLINPIKRLAAGSIFAGFLLYNNIPPMTTPQMTMPLYLKILALTMTALGFSLAMELNTITYNLK--LNKPSPLLKFSTQLGFFPMTMHRLMPHYKLTLSQNMASLLLDLTWLEKAMPKALSHLQIASST--TTSNQKGLIKLYFLS---LLTSL--LLTTLLTI----------------- +>Pudu_puda_ +----MNENLFASFITPM-ILGFPLAIFIVIFPSLLFPTSN-RLVNNRLISLQQWVFQLVSKQMMGIHNTKGQTWTLMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVIMGFRNKTKASLAHFLPQGTPTLLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTMALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFMMIMSMF-LTLFIIFQLKVSKHTFLF-NPEPM-STKLQKQ-NTP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMNAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEVTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMALLMIGLTTNFLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTYIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYASDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMIHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDIMGVLLLIFFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLILMPLLHTSKQRSMMFRPFSQCLFWALVADLLTLTWIGGQPVEYPFVVIGQLASILYFLIILVLMPITSTIENNLL---KW--------MF--------MINILMLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLMMNGSFTLSTLITTQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHSPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-IIFIIILSTMMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMISGQW--TVMKLFNPMASMLMTIALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILPYNPTMMLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKMPVMTILILVTLLSMGGLPPLSGFMPKWMIIQEMTKNNSLILPTSMAIMALLNLYFYTRLTYSTALTMFPSVNNMKMKW-QFSTTKKMTLL-------PTMLVLSTMLLPLTPILSVLE---MN-LMLALLTNFTLSSLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWACQTNNLNTMLTMALFLILLLAASLAYEWINKG--LEWTE-MSLVYMNIMTAFMVSLTGLLMYRSHLMSSLLCLEGMMLALFVMATLTILNAHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTYSLLISLTSL-PLMSQFNDNSLNFS-LLFFSDSLSMPLLILTMWLLPLMLMASQHHLSKESLTRKKLYITMLILLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYLQNITGSLNFLILQYWVQPLS-SSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITMFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTYHINNILPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSTF-TLATLLLLTIPIMIT---SSNYYKT-YNYPLYVKTT-ILYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGVMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLTNLNAWDFQQIFMLNPN-NTNVPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNKFAQSTLLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIETVNTSYTNAWALLMTLIATS-FTAIYSTRIIFYALLGQPRFPTLVTINENNPLLTNSIKRLMIGSLFAGFIISNNIPPTTIFQMTMPHYLKMTALAATILGFILALEISNMTQNLK--FNYPSNAFKFSNMLGYFPTIMHRLAPYMNLTMSQKSASSLLDLIWLENVLPKTISLMQTKMSI--MITNQKGLIKLYFLS---FLITI--IISTILL----------NFHE---- +>Panthera_leo_persica_Asiatic_lion +----MNENLFTSFTTPT-MMGLPVVVLIIMFPSILFPSPN-RLINNRLVSLQQWLVQLTSKQMLAIHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVVTGFRHKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLALTN-INASVALITFIILILLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISMI-MTLFIMFQLKISKHLYPS-SPEPK-STAALKQ-PNP-W-EKKWTKIYSP-LS-LPQQ-MLPMFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNVKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLVVFMVWEAFASKREVAMVELTTTNLEWLHGCPPPYHTFEEPTYVLL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINSPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTQELKPGELRLLEVDNRVVLPMEVTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMGTRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSVSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHYNSTLLLTLGMTTNLLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQVSEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLKYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLVKIINHSFIDLPTPPNISAWWNFGSLLGVCLILQILTGLFLAMHYTPDTMTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYMHVGRGMYYGSYTFSETWNIGIVLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGADLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGMVSDSDKIPFHPYYTIKDILGLLVLILTLMLLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIIPALHTSKQRGLMFRPLSQCLFWFLVADLLTLTWIGGQPVEHPFITIGQLASILYFSILLILMPISGIIENRLL---KW--------MF--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAMKLFTKEPLRPLTSSTFMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLATLITTQEYIWLIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHSPYMPELYTTNFTVKTLILTTTFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPIITASI-P-PQT--MKP-SIFIIIMLTVISGTMIVMTASHWLMVWIGFEMNLLAIIPILMKKYNPR-ATEAATKYFLTQATASMLLMMGIIINLLHSEQW--TVSKDLNPMASIVMTTALAMKLGLAPFHFWVPEVTQGISMSSGLILLTWQKIAPLSILYQISPTINPNLLLTM-ATMSVMIGGWGGLNQTQLRKIMAYSSIAHMGWMAAIMMYSPTMMILNLTIYIIMTLTTFMLFMYNSTTTTSSL---SQTWNKTPLITSFILVLMMSLGGLPPLSGFIPKWMIIQELTKNEMIMMPTLLAMTALLNLYFYMRLTYTTALTMFPSNNCMKMKW-RFERTKKTILL-------PPLIVMSTMLLPLTPMLSILD---MN-MMIALLTNTLLSTLLVFIAFWLPQLNIYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLPTMLITALLLISLLAASLAYEWTQKG--LEWTE-MSMVYVNMFLAFIMSLMGLLMYRSHLMSSLLCLEGMMLSLFIMMTVTILNNHFTLASMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTAMLMPMTWLSKPNMIWINSTTYSLLISLISL-PYLNQLGDNSLNLS-LLFFSDSLSAPLLVLTTWLLPLMLMASQSHLSKETLARKKLYITMLIILQLLLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALLYIQNTTGTLNFLIIQYWAKPIS-ATW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-MTNQMAYPFMMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSTLFCLANSNYERVHSRTMILARGLQTILPLMAAWWLLASLANLALPPTINLIGELFVVMASFSWSNMTIVLMGTNIIITALYTLYMLTTTQRGKYTHHIKNINPSFTRENALMALHLLPLLLLSLNPKIVLG---------MNLFASF-MLTSMFMLLLPIIMS---NTQLYKN-NLYPHYVKTT-ISYAFTISMIPAMMFVSSGQETIVSNWHWLSIQTLKLSLSFKLDYFSIIFIPVALFVTWSIMEFSMWYMHTDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFITAMAWFLANMNAWDFQQIFITQHK-NLNIPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQNKTMQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKPMPFTTSSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALSVTLIATS-LTAAYSTRIMFFALLGQPRFNSLSPINENNPHLINSIKRLLVGSIFAGYLISHNIPPTTIPQMTMPHYLKLTALAMTITGFILALELNLAAKNLK--FKYPSNLFKFSNLLGYFPTVMHRLPSTMSLTMSQKSASMLLDMIWLESVLPKSISHFQMKMST--IVSNQKGLVKLYFLS---FMITL--TLSLLLL----------SSHE---- +>Monodelphis_domestica_gray_short-tailed_opossum +----MNENLFAPFVTPT-IMGITTLPIIIMFPCVMLSSPK-RWLPNRIQTLQIWLIRLITKQMMTMHNKQGRTWTLMLISLILFIASTNLLGLLPYSFTPTTQLSMNIGMAIPLWAGTVIMGFRNKPKISLAHFLPQGTPTPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGAATLALSS-INTTVSTITFSILFLLTILELAVAMIQAYVFTLLVSLYLHDNSMPQLDTSTWTLTIMLMI-ISLFCIYQLKMMNQVIIQITPSNEKKKA-TKS-TLP-W-QTKWTKIYLP-HS-SHQQL---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRTNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYMLNDLWTKIHFFIMFVGVNLTFFPQHFLGLAGMPRRYSDYPDAYTMWNVLSSIGSFISLTAVILMVFIIWEAFASKREVLNVELTTTNIEWLYGCPPPYHTFEQPVFIKA----------MPYPMQTGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETIWTIMPAVILVLIALPSLRILYMMDEIYNPYLTVKAMGHQWYWSYEYTDYENLTFDSYMVPTQDLMPGQLRLLEVDNRVVLPMELPIRMLVSSEDVLHAWAVPSLGLKADAIPGRLNQVTLTSSRPGVFYGQCSEICGSNHSFMPIVLEMTSLKYFEKWSSMMQA---------MTHQTHAYHMVNPSPWPLTGALSALLLTSGMIMWFHYNSMFLLMVGLISMLLTMYQWWRDIIREGTFQGHHTPVVQKGLRYGMVLFILSEVFFFIGFFWAFYHSSLAPTHELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQMIQALTITILLGLYFTILQAMEYYESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCLLRQFYFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKNHPLMKIINHSFIDLPAPSNISAWWNFGSLLGMCLIIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNLHANGASMFFMCLFLHVGRGIYYGSYLYKETWNIGVILMLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVEWIWGGFSVDKATLTRFFAFHFILPFIILALVIVHLLFLHETGSNNPTGINPNSDKIPFHPYYTIKDALGLILMLLILMSLAMFSPDMLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLIIPLLHTSKQRSLMFRPISQIMFWSLVANLLTLTWIGGQPVEQPFIIIGQLASILYFSLIIIFMPLAGMYEDHLLE-PKFP-------MF--------LINLLIYIIPILLAVAFLTLIERKVLGYMQLRKGPNVIGPYGILQPFADAVKLFTKEPLRPLTSSISMFIIAPILALTLALTIWTPLPMPHTLIDLNLGLLFILSLSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKNLMITQENMWLIMTAWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIMAMNAMTTILFLGPPLNHNHTYTCTISFMFKTMLLTSAFLWVRASYPRFRYDQLMYLLWKSFLPITLALCLMFISIPIALSSI-P-PQM--MSP-YVLTIVSLSLLTGTSVTLISNHWLTAWMGLEINTLAIIPLMTYPHHTR-NTESAIKYFMTQATASMLLMFSIIYNASFTNQW--TINHSPNQWASLLMTLALAMKLGLAPFHFWVPEVTQGIPLLSGMMLLTWQKIAPISIMYQISPSLNMQVLMTL-SILSTLLGGWGGLNQTHLRKMLAYSSIAHMGWMTIIIIIYPTLTMLNLLIYFTTTITMFLMFNHSSMTKINSL---STLWNKSTPITIIIMLTLLSLGGLPPLTGFMPKWLILQELISYKNMPLATALALSALLNLFFYMRIIYLSTLTMAPSINNSKMQW-TLLPPKTLTLI-------PTLTMISLLFLPLTPMFIVLT--MIN-LMVTLLVNSLLATIVIIIAFWLPQLYLYMEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQLPNPFIMLALSYCLIILLTAGLAYEWLQKG--LEWAE-MEQINLNMITAFTIALMGVLTYRSHLMSTLLCLEGMMLSLFILMVLLISHSHMVSMSMAPLILLVFSACEAGVGLALLVTISHTYGNDYVQNLNLLQCMLKILMPTIMLIPLTWFSKKPWLWVNTTSYSLIIAISSL-MLLYHSMDMGYNFN-GSFSMDTLSGPLLILSCWLLPLMIMASQNHLNKESLLRKKLYITLLITLQLSLIMAFTSSELIMFYILFETTLIPTLIIITRWGNQNERLNAGLYFLFYTLVGSLPLLVALLNLNYSLGSMHMLTNFLLINTLE-HST-----SSTLMWYACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITTFIEP-ITIQLSYPFIILSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMGLVIVAALMQTTLSFMGATVLMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQMILPLMCTWWLLASLANLALPPSINLLGELMVIISSFSWSNWSILLLGLNTVITALYTLYMLITSQRGKFTHHLNPLHPTMTREHMLMTLHMLPLLIISLNPKYILGTTF------MNFTLNSMILLSIIMLVSPLLYN---MLMPHKT-TYFPTYCKNM-IMMAFMTSLPPMIIFMLYGQESVITNWHWFSITTFNISMSFKLDFFSIIFIPIALYDAWSILEFSLWYMHSDIFIHKFFKYLVSFLLTMIILVSANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFMLTMAWLMLNSNSWELQNIFSTNMD---FIALLGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMMENNQMILTTILCLGAMTTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTVGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLFLILPITSSALMTGSLALVGTPFLAGFYSKDSIIEAINTSYTNSWALMMTLIATS-LTAIYSLRIIYYALLGNPRFSSISPINENNPNLINPIMRLAMGSIFAGFLVTMSIPPMTSITMTMPDMIKLSALLITLAGLAIGMELNSFTNKL---MNSMKHTTNFSNMLGYFTYFTHRIYPLMNLYSGQRIATMLIDMNWYEKTGPKGQTNIHSSMSS-LLTSTQKGLIKVYFMS---FLISI--TLALMFASMS-----TNNF------ +>Myotis_ikonnikovi_ +----MNENLFASFITPT-MMGLPIVVLIIMFPSMLFPSTT-RLINNRLVSIQQWLIRMTTKQMMAIHSKKGQTWALMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISMTTAFITFIILVLLTVLEFAVALIQAYVFTLLVSLYLHDNAMPQLDTSTWFITIISMI-ITLFIMFQLKISKHYYYN-NPEPL-TTKLQKH-STP-W-ETKWTKIYLP-LS-LPQR----MFINRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFTGYTMSTTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMIFMVWEAFASKREVLMVELPSTNLEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLSFHDHALMIVFLISSLVLYIISSMLTTNLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTIKTLGHQWYWSYEYTDYEDLMFDSYMVPTSELSPGQLRLLEVDNRVVLPAELTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICGSNHSFMPIVLEMIPLKYFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNTSLLLLLGLTTNMLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFILSEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRAHMMQALLITILLGLYFTVLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLVKIINSSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFNSVTHICRDVNYGWVLRYLHANGASMFFICLYLHVGRGLYYGSYMYTETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLLMIMVLLMLVLFSPDMLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIIIPLLHTSKQRSMAFRPLSQCLFWLLAADLLTLTWIGGQPVEHPYVIIGQLASILYFSIIIIFMPLTSLVENHLL---KW--------MY--------FVNLLMMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPMQPLTSSLTLFIIAPTLALTLALMMWIPLPMPLPLINMNLSMLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSILFMNGSFTLTTLITTQEYTWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTTILFLGAYNSPMLSELYTINFATKTLLFTMIFLWVRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVTLPIILASI-P-PST--MNP-LTLSLVLTTMISGTLIVMTSSHWFMTWVGFEMNMLAIIPLLTKEHNPR-STEAATKYFLTQATASMLLMMAAITNLLYTGHW--SIMKLINPTASIMMTMALTMKLGLSPFHFWVPEVTQGIPLMSGLILLTWQKLAPLSILYMIAPLINMNLLLIM-SLMSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMAILTYNPTMTLLNLYLYIPMTITTFMLLMLSSATTTTSL---SHTWNKLPLITILILTTMLSLGGLPPLTGFLPKWAIIQEMTKNNNILMPTLMTLLALLNLYFYTRITYTTSLTMFPTTNNMKIKW-QFKNPKQTMQL-------PLMITISTLTLPLAPIMMILE---MN-FILTLIINTLLASLLVTIAFWLPQMNVYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDKLVTMLFMSLFLISLLIISLAYEWMQKG--LEWSE-MSLTHLNILLAFTTSLLGLLMYRSHLMSSLLCLEGMMLSLFVLVTVTILITHTTLASMMPIILLVFAACEAALGLSLLVVVSNTYGVDYVQNLNLLQCMLKIIIPTTMLIPLTWLSKSNMMWINSTIYSLMISMACL-PLMNQPCDNSLNLS-LLFFSDSLSTPLLMLTTWLLPLMIIASQYHMTKESPMRKKLYITMMILLQIFLIMTFSATELIMFYILFEATLVPTLIIITRWGGQTERLNAGIYFLFYTLAGSLPLLIALIYTQTTLGSLNMLLTQYLTEPPT-YIW-----SNSLLWLAFMLAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITIMLNP-AVNFMVYPFMMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIMAILIQSPWGFMGATALMIAHGLTSSLLFCLANSNYERTHSRTMILARGLQTILPLMAAWWLLASLTNLALPPSINLIGELFVTVSMFSWSNFSMILLGINITITALYTLYMLITTQRGKYTYHIHNIKPSYTRENTLMVLHLTPLLLLMINPKIILGTMY------MNLFSTL-MLLSLAILMLPLMST---SNKASNH-YSYPQYVKTM-IFYSFMISLPPTIMFIQSGQEMMISNWYWMTIQTMKLSLSFKLDFFSMMFVPVALFITWSIMEFSMWYMHLDPNINRFFKYLLMFLITMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILSMAWFMANSNSWELQQIFMLNLD-NTTFPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNKTVQSLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLFKPLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-LTAVYSTRIIFFALLGKPRFPSLILINENNPLLINPITRLLIGSIFAGFFISNNINPSTVPQMTMPLYLKLTALFVTLMGFTMALELNYMTQYLK--YKHPSNTFKFSTMLGYFPLTMHRLNPLTSLIMSQKSATMLLDLIWLENVLPKLITKIQQNTSI--MVSNQKGLIKLYSLS---FLITM--TMALIMF----------NFHV---- +>Pseudois_schaeferi_dwarf_bharal +----MNENLFTSFITPM-MLGLPLVTLIILFPSLLFPTPN-RLINNRLISLQQWAVQVVSKQVMSIHNTKGQSWTLMLMSLILFIASTNLLGLLPHSFTPTTQLSMNLGMATPLWAGAVITGFRNKTKVSLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTS-ISTTTALITFVILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTVILSMF-LALFIVFQLKISKHNFYH-NPELT-TTEMSKQ-NAP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTPELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNTFIDLPTPSNISSWWNFGSLLGICLTLQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGIILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAMVHLLFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGAALLILALMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLVPFLHTSKQRSMMFRPISQCMFWVLVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVMMPVASSIENNLL---KW--------MF--------MINVLTLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFNLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINFIIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILTTVMLGTAIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEASIKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPTASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKAPIMTVLALITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLTYSTALTMFPSTNNTKMKW-LFSTTKRMSLL-------PTMAVLSTMLLPLTPILSILE---MN-LMITLLTNFSLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMTAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTLHSLLISLTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLARKKLFISMLILLQLFLIMTFTATELIFFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALVYIQNTMGSLNFLVLQYWVQPMP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITLLLNP-TTDSMAYPFIMLSLWGMIMTS--SICLRQTDLKSLVAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLVGELFVIMSTFSWSNITIILMGLNMVITALYSLYMLIMTQRGKYTHHINNIPPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSL-ALTTLILLTAPIMMT---NLNIHKP-TNYPLYVKTT-VSCAFITSMVPTMMFIHTGQEMIISNWHWLSIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDFQQIFMLKPE-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLAENNKLAQSIMLCLGAITTMFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLVATS-FTAIYSTRIIFFALLGQPRFPTLTNINENNPFLTNSIKRLLIGSLFAGFIISNSIPPTTIPQTTMPHYLKMTALTITILGFILALEISNMTHYLK--FNYPSNAFKFSNLLGYYPTIMHRLTSYMNLTMSQKSASSLLDLIWLETILPKTISLTQVKMST--TITSQKGLIKLYFLS---FLITI--LVSTILL----------NFHE---- +>Rangifer_tarandus_reindeer +----MNENLFASFITPV-ILGLPLATLIVMFPSLLFPTSN-RLVNNRLISLQQWALQLVSKQMMGIHNAKGQTWTLMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVVTGFRNKTKASLAHFLPQGTPAPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISTTMALITFIILILLTVLEFAVAMIQAYVFTLLVSLYVHDNTMPQLDTSTWFMMIMSMF-LTLFIIFQLKVSKHNFFF-NPELT-SIETQKQ-NTP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGTGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTILLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDSDKIPFHPYYTIKDILGILLLILFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEHPFITIGQLASILYFFIILVLMPITSMIENNLL---KWG-------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLMMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-IIFIIILSTMMLGTIIVMISSHWLLIWIGFEINMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLQKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMAVLILVTLLSMGGLPPLSGFMPKWMIIQEMTKNNSLILPTFMAITALLNLYFYMRLTYSTALTMFPSMNNMKMKW-QFSTMKQMTLL-------PTMFVLSTMLLPLTPILSVLE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWACQTNNLYTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNLIWINSTTHSLLISLTSL-LLMNQFIDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESLTRKKLYITMLILLQLCLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYFQNITGSLNFLILQYWVQPLP-NSW-----SNVFMWLACMMAFMVAMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTMFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNILPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-TLITLILLTIPIMTT---SSDNYKT-YNYPLHVKTT-ISCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTVKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLVNLNAWDFQQIFMLNPN-ESNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTATCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFLTLTPINENNPFLMNSIKRLMIGSLFAGFIISNNIPPMTIPQMTMPHHLKMTALAVTILGFILALEISNMTKNLK--FNYPSNIFKFSNMLGYFPMIMHRLTPYMNLTMSQKSASSLLDLIWLENILPKTTSLMQTKMSI--MITNQKGLIKLYFLS---FLITI--IVSTILL----------NFHE---- +>Rhinopithecus_brelichi_Gray_snub-nosed_monkey +----MNENLFTPFMTPT-ILGLPAVVPIILFPTLLFPTSK-HLISNRLIIIQQNLIQLIMKQMMTIHNTKGQTWSLMLMSLIIFIATTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVITGLRFKTKNSLAHFLPQGTPTPLIPMLVVIETISLFIQPVALAVRLTANITAGHLLMHLIGSATLALLT-ASFLATSLTLVLLVLLTILEMAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFITIMAML-PALYLIMQLKLLNSNYHF-SPPQKEVYNTQVF-NNP-W-QLKWTKIYLP-HS---------MLINRWLFSTNHKDIGTLYLLFGAWAGTMGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNFSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQVCAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSMGSFISLVAMLLMVYMIWEAFASKRKVLLIEQPTSNLEWLHGSPPPYHTFDEPTFIKV-K--------MPHPVQLGLQDATSPIMEELIAFHDHAFMIVSLISFLVLYVLSSVLTTKLTNTNITDAQEMETIWTILPAVILILIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPSLGLKTDAIPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGALSALLMTSGLIMWFHFYSSTLLVLGLLTNMLTMYQWWRDIVRESTYQGHHTTPVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPYLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKQMIQALSITILLGAYFTLLQISEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTVCLIRQLLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTPMRKSNLIMKMINHSLIDLPTPSNISAWWNFGSLLATCLMLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWTIRYLHANGASMFFICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNIVQWVWGGYSIDNPTLTRFFTLHFTLPFIIAAFTILHLLFLHETGSNNPCGIPSNPDKIPFHPYYTIKDILGLTFLLLTLMVLVLFLPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLMSILILAIIPMLHKSKQQSMMFRPFSQFLLWLLITILLTLTWIGSQPVNQPFIMIGQMMSVMYFTTILILMPLASMTENNLL---K---------MF--------TVNLLLITLPIIAAMAFLTLTERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTTLYIIAPVLAFSIALLLWVPLPMPNSLINLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIIMLSVLLMSGSFNLHALITTQEYIWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNVLTTMIFLGTLYPTHSPELFTVCFVTKTLLLTSMFLWIRATYPRFRYDQLMHLLWKNFLPLTLALLMWYISTPIMISGI-P-PQN--MNP-LAQLVIYSTMIMGTLITSLSSHWFLAWAGLEMNMLAFTSILIKKANPR-STEAATKYFLMQSTASMILMMAITLNNLFPGQW--IMMNNPNQLTSLIMMMALAMKLGMTPFHFWIPEVTQGTPLIPGLLLLTWQKLAPILIMYQIYPSINTNILMTL-STLSIMAGSWGGLNQTQLRKILAYSSITHMGWMMMTLVYNPNITVFYLLMYIIMTSTAFMALNLSSNTTTLML---SRAWNKLTWLMPLMSATLLSMGGLPPLTGFLPKWVTIQELTKNNNFVMPSIMVIMTLLNLYFYLRLIYTTSMTLLPTSNNTKMKW-QFENTKPTPLM-------PPLIILTTLLLPMSPTILTMF---MN-LVLALTINTLLTLLLMTIMFWLPQLNPYAEKINPYECGFDPLNSARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTSLPMMFKSSIMLIIILTLSLAYEWTQKG--LEWIE-MPIIYMNIMLAFIISLLGMLIYRSHLMSSLLCLEGMMLSLFIMNTLMALNMHFPLANIMPIALLVFAACEAAVGLALLISISNTYGLDHIHNLNLLQCMLKMVFPMMMLLPTTWFSKNNLIWINLTTHSLIISLIPI-LFFHQTNNNLISYS-TYLSSDPLTTPLLTLTAWLLPLMIMASQYHLHNESPLRKKLYLSMMISLQISLIMTFMATELILFYILFETTLIPTLIIITRWGNQAERLNASTYFLFYTLAGSLPLLIMLLFMHNNLGSLNIPLLTLTAQKLT-TTW-----SHNLTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIMASLIQTPWSFTGAIVLMIAHGLTSSMLFCLANSNYERTHSRIMLLSRGLQTLLPLMAFWWFTANLTNLALPPTINLIGELLVMVTSFSWSHATIMLTGLNMLITALYSLYMLITTQRGTLTSHIINMKPSFTRENMLMFMHMSPIILLSLNPSIIMGFTT------MTMHTSI-VMLALTSLVFPIIIT---LIKPNKN-FMYPNYVKTT-MMITFIISLFPMTMYVLLDQDTIISNWHWVTIQSLEIMLSFKLDYFSMMFTPIALFITWCIMEFSMWYMSSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAAIQAILYNRIGDIGFILAMTWFLLHYNSWDFQQMFILDSS-PNLLPLMGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPMMENNMLIQSLTLCLGAVTTMFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFICSGSIIHNLDNEQDIRKMGGLFKTMPLTSTSLTVGSLALAGMPFLTGFYSKDLIIETANTSYTNAWALSITLIATS-LTSAYSTRTIILTLTGQPRFSTSTHINENNPALLNPMKRLTVGSLLAGFLIVSNVSPTTLPQLTMPYYLKLLALSVTTLGFLMALDLTLMTNNLK--MNIPSHMFKFSNMLGYFPATIHRMIPYQNLIMSQNLAFTLLDSIWLEKSMPKTISHTHIITSI--TTTTQKGMIKLYFIS---FLIPL--TLIPFLMA----------------- +>Pseudomys_chapmani_western_pebble-mound_mouse +----MNENLFTSFMTPT-VMGLPVVITIIMFPSILFPSSE-RLISNRLHSFQHWLIKLIIKQLMLIHSPKGRTWALMIVSLIMFIGSTNLLGLLPHTFTPTTQLSLNLSMAIPLWAGVVILGLRHQLKNSLAHFLPQGTPIPLIPMLIIIETISLLIQPMALAVRLTANITAGHLLMHLIGGATMVLMD-ISPPTATITFIILLLLTILEFAVALIQAYVFTLLVSLYLHDNSMPQLDTSTWFITIVSSM-ITLFILFQLKISSQTFPM-PPSPK-HMTTLNT-KNP-W-ESKWTKIYLP-LL---------MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLNDTWAKAHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVLVMIFMIWEAFASKREVLSVSYTSTNLEWLHGCPPPYHTFEEPSYVKT-K--------MAYPFQLGLQDATSPIMEELTNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAAILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNELKPGELRLLEVDNRAVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKDFENWSILMS----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSTTLLLIGLLTNMLTMYQWWRDIIREGTYQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTHDLGSCWPPTGILPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALAITIMLGLYFTMLQASEYFETSFSISDGVYGSTFFMATGFHGLHVIIGSSFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHLVDVVWLFLYVSIYWWGS--MTNMRKTHPLMKIINHSFIDLPTPSNISSWWNFGSLLGLCLTIQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHIGRGMYYGSYTFIETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITAMVVVHLLFLHETGSNNPTGLNSDADKIPFHPYHTIKDLLGVFMLVLLFTTLVLFFPDLLGDPDNYSPANPLNTPPHIQPEWYFLFAYAILRSIPNKLGGILALIMSTLILMLLPLLHTSKQRSLIFRPITQTLYWILVANLLILTWIGGQPVEHPFTIIGQLASISYFSIILVFMPISGIIENKML---KWDT------MY--------FINMLAFLLPILVAMAFLTLVERKILGYMQLRKGPNIVGPYGMFQPFADAMKLFMKESTRPLTTSISLFIIAPTLSLTLALSLWIPLPMPHPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQTLMFSQEQMWLIIPTWPLALMWYISTLAETNRSPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTTIVFLGPLYNMFMPELYSINFMTKTLLLSITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFMASI-P-PHM--MNH-ITLIIIYFTILMGPVITMSSTNLLLMWTGLEMSLLAIIPLLINKKNPR-STEAATKYFITQSTASMIMLLAIILNYKQLGLW--TFQQQTNNMLINMTLIALSMKLGVAPFHYWLPEVTQGIPLHTGLIILTWQKIAPLSILIQMYQLLNPTATLIL-AVLSIFTGAWGGMNQTQTRKIMAFSSIAHMGWMLAILPFNPTISLLNLTIYIITTIPMFMVLMTFNSTTINSI---SLLWNKTPMMTTITPLILMSLGGLPPLTGFLPKWITITELLKNNCLILTTMMTIMALLNLFFYTRLIYSTSMTIFPTNSNSKMMS-HTTHQKYNPML-------PLLTMISTLTLPLSPQLIS-----MN-LIMIILTNSLLSLILVSIAFWLPQVNMYTEKVNPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTTNTITMTMSAFILVTILSLGLAYEWLQKG--LEWTE-MTYTLLNLTLAFSLSLMGTLIFRSHLMSTLLCLEGMMLSLFTMTSMATLNSNSMASLPIPITILVFAACEAAVGLALLVKISNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLTWLSKGKKTWTNVTSYSFLISLTSL-TLLLH-DQNYQNHS-ITFFSDNLSTPLIILTTWLLPLMLMASQNHMKKEKNMYQKMYISMLINLQILLILTFSVNELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSIPLLIVLIYIQNSTGTLNFLIISLTNTHID-NTW-----SSNIMWLSCMMAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRISIMLDP-LTKHMAYPFMLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITSIMIQTPWSFMGAMMLMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQTIFPLMTMLWLLASLTNMAIPPTINLIGELFITMSLFSWSNTSIILIGLNIIITALYSMYMIITTQRGKLTNHMNNMHPSHTRELTLMTLHLIPLALLTMSPKLIMGPMT------MNTATSS-MLMTFMVLTFPIMLQ---STNLTKN-TNFPLLAITA-IKFSLILSLMPLLMFLYTNTEHVITNWHWMTMNSIKISMSFKIDYFSLLFMSVALYVTWSIMEFSSWYMHSDPDLNRFIKYLMFFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRSDANTAALQAILYNRIGDIGLILSMTWFCLNNNSWELQQIMLT-NN-NNLIPLMGLLIAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVYLMVRFHQLTSNNTIILTTMLCLGAMTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGNLTKTLPATSSCLTIGCLALTGTPFLTGFYSKDSIIESINTSHTNAWALLITLIATT-MTAMYGMRIIYFTMMSKPRYPPTISMNENNPNIINPIKRLALGSILAGFILSISIPPANTQTLTMPWYLKFTALMVSILGFLISLELNNLTLKLL--QPKNNIYSSFSTALGYYPMIMHRILPKKTLNSSFKTSLNTMDLIWLEKTFPKSISTMNTNMIK--TLTNQKGMVKLYFMS---FLISI--LLFTILCMI---------NLE---- +>Pygathrix_cinerea_2_RL_2012_ +----MNENLFTSFTHPT-LLGLPAVVPIILFPTLLLPTSK-YLINNRLITIQQNLIQLIVKQMMMIHNIKGQTWSLMLMSLIIFIATTNLLGLLPHSFTPTAQLSMNLAMAIPLWAGTVITGLRFKTKSSLAHFLPQGTPTLLIPMLVVIETISLFIQPVALAVRLTANITAGHLLMHLIGSATLVLST-ISLSMTSLTLVLLVLLTILEMAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWLITIMTML-PALYLIMQLKLLNMVYYF-PPSQK-VSSTQMF-NNP-W-QLKWTKIYLP-HL-HTQHS---MLINRWLFSTNHKDIGTLYLLFGAWAGTTGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNFSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDEICAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVVSSMGSFISLVAMLLMIYMIWEAFASKRKVLFIEQPTYNLEWLHGSPPPYHTFDEPTFIKV-K--------MPHPVQLGLQDATSPIMEELIAFHDHAFMIVAMISFLVLYVLSSVLTTKLTNTNITDAQEMETIWTILPAIILILIALPSLRILYLTDEVNNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGALSALLMTSGLIMWFHFYSTTLLTLGLLTNMLTMYQWWRDIIRESTYQGHHTTPVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPHLGGHWPPTGIIPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKQMIQALSTTILLGIYFTLLQMSEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTTCLIRQLSYHFTSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MIPVRKSNPIMKLINHSLIDLPTPSNISAWWNFGSLLATCLILQIITGLFLAMHYSPSTSSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGIALLLMVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSIDNPTLTRFFTLHFTLPFIITAFTVLHLLFLHETGSNNPCGIPSNSDKIPFHPYYTIKDMLGLVLLILLLMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLMSILILMIIPMLHKSKQQSMMFRPFSQFTLWLLITVLLTLTWIGSQPVNQPFIMIGQVASTMYFTTILILMPLASMIENNLL---K---------MF--------TMNLLLIILPTMAAMAFLTLTERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTTLYIIAPALAFSIALLLWVPLPMPNSLINLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIIMLSVLLMSGSFNLHALITTQEHLWLLLPSWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTATIFLGTLYPIHSPELFTTCFVTKTLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLALLMWYISTLIMTSGI-P-PQS--MNP-LAQLVIYSTMIMGTLITSLSSHWFLAWTGLEMNMLAFTSILIKKANIR-STEAATKYFLTQATASMILMMAIMYNNLLSGQW--TLMNNPNQLSSLIMTMALAMKLGMTPFHFWVPEVTQGTPLMSGLLLLTWQKLAPISIMYQIYPSINTSILMTL-STLSIMAGSWGGLNQTQLRKILAYSSITHMGWMMMTMTYNPNITIFYLLMYIIMTSTAFLALNLNSNTTTLML---SRTWNKLTWLMPLMLLTLLSMGGLPPLTGFLPKWMTIQELTKNSNFIMPSIMITMTLLNLYFYLRLTYITSMTLLPTSNNTKMKW-QFENTKPMPLF-------PPLIIFTTLLLPMSPTVLTLF---MN-LMLTLMINTSLTILLMIIMFWLPQLNSYVEKANPYECGFDPLNSARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPVMIKSSITLIIILTLSLAYEWTQKG--LDWTE-MSIIYMNIMLAFTTSLLGMLIYRSHLMSSLLCLEGMMLSLFIMSTLTALNTHFPLANMVPIALLVFAACEAAVGLALLISISNTYGLDHIQNLNLLQCMLKMIFPTMMLLPTTWFSKNNLVWINLTTHSLMISLIPL-MFFNQINNNLISHS-TYLSSDPLTTPLLMLTAWLLPLMIMASQYHLHNESPLRKKLYLSMMIFLQISLIMTFMATELILFYILFETTLIPTLIIITRWGNQAERLNASTYFLFYTLAGSLPLLIMLIYTHNKLGSLNIPLLTLMAQKLT-TSW-----SHNLAWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTPILNP-LTEHMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIMASLIQTPWSFTGAIILMIAHGLTSSMLFCLANSNYERTHSRIMLLSRGLQSLLPLMAFWWFVANLTNLALPPSINLIGELLVVTSSFSWSHITIIFTGLNMLITALYSLHMFITTQRGTLTSHIINMKPSFTRENMLMFMHMSPIILLTLNPSIIMGFTP------MMMHTSI-FMLALTPLIFPIIIT---LISPNKN-NMYPNYVKTT-MMFTFTISLIPTTMYTFLGQDTIMSTWHWMTIQSLEITLSFKLDYYSVMFTPIALFITWCIMEFSLWYMDSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYARTDANTAAIQAILYNRIGDIGFILAMMWFLLHYNSWDLQQMFILDPN-PDLLPLVGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPPMENNTTIQSLTLCLGAITTMFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFICSGSMIHNLNNEQDIRKMGGLFKTMPLTSTSLMIGSLALTGMPFLTGYYSKDLIIETANTSYTNAWALCITLIATS-MTSAYSTRTIILTLTGSPRFSTSVYINENNPTLLNPMKRLAAGSLLAGFFIVNNISPTTVPQLTMPYHLKLLALCVTTLGFLTALDLTLMTNSLK--MNTPSHMFKFSNMLGYFPITIHRTVPYQNLTMSQNLAFLLLDLLWLEKSMPKTISHTHIITAI--TSTTQKGMIKLYFLS---FLISL--TLIPLLIM----------------- +>Giraffa_camelopardalis_angolensis_Angolan_giraffe +----MNENLFASFITPT-FLGLPLVILIVMFPNLLYPTSN-RLTNNRLISLQQWTLQLMSKQMMNIHNTKGQTWTLMLMSLILFIGTTNLLGLFPHSFTPTTQLSMNLGMAIPLWAGAVATGFRNKTKASLAHFLPQGTPTLLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISAMTALITFAVLILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMIMSMI-MALFIVLQLKISKHNLYH-NPKPT-PTEMHKQ-HTP-W-ETKWTKIYLP-LS-SPLHF---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAVSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTLWNTISSMGSFISLTAVVLMIFIIWEAFASKREVLAVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLEYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSTILLLLGLTTNMLTMYQWWRDVIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGTTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIVNNALIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHMGRGLYYGSYTFLETWNVGMILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALTMVHLLFLHETGSNNPMGIPSDMDKIPFHPYYTIKDILGALLLILALMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALISSILILALMPLLHTSKQRSMTFRPLSQCLFWILVADLLTLTWIGGQPVEHPFIIIGQLASIMYFLIILVLMPVTSAIENNLL---KW--------MH--------MINILMLIIPILLAVAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSTSMFILTPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQERTWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNAFTTILFLGAFHSPHMPELYTINFTIKLLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSFPVILSGI-P-PQT--MNP-IIFTIILLTLMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTL-SIISIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMVLNLIMYIITTSTMFMLFMANSTTTTLSL---SHTWNKMPVMTILILTTLLSMGGLPPLSGFMPKWMIIQEMTKNNNIILPTLMAISALLNLYFYTRLMYSTTLTMFPSTNNTKMKW-QFPATKQMTLL-------PTMVTLSTMLLPLTPILSVLE---MN-LMLTLLINLLLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNDLYTMLTMALLLILLLAASLAYEWTQKG--LEWTE-MSLVHMNIMTAFAVSLTGLLMYRSHLMSSLLCLEGMVLSLFVMATLIILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIISTMMLMPLTWLSKNNMIWINPTAHSLLISLTSL-LLTNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALTYIQNMVGSLNFLILQYWTQPVS-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTLLNP-LTDLMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGAMALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELLVMMSAFSWSNATIILMGVNMVITALYSLYMLITTQRGKHTHHINNITPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNLFSSL-SLTTLFLLTIPIMMT---SSSTYKT-SNYPLYVKTA-ISCAFTTSMVPTMMFIHTGQEMVISNWHWLTIQTIKLSLSFKMDYFSMMFIPVALFVTWSIMEFSIWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRIGDIGFILAMAWFLANLNAWDFQQIFMLDPN-NSNLPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKLIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSNTNAWALLMTLIATS-FTAIYSTRTIFFALLGQPRFPTLITINENNPTLTNPIKRLLIGSLFAGFIISNSIPPTTIPQMTMPQYLKMTALAVTILGFILALEISNMTQNLK--FSHPSNSFKFSNQLGYFPTIMHRLIPHVSLTMSQKSASSLLDLIWLENILPKTTSLIQMKMSI--IVTNQKGLIKSYFSS---FLITI--LISMILF----------NFHE---- +>Mazama_gouazoupira_gray_brocket +----MNENLFASFITPV-ILGIPLAIFIVIFPSLLFPTSN-RLVNNRLISLQQWVLQLTSKQMMGNHNIKGQTWTLMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVVIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLTLMN-ISTTMALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFMMITSMF-LTLFIIFQLKVSKHNFPF-NPEPL-LTKTQKQ-STP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYINL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMNAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSIILLMVGLTTNFLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITISLGIYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYSSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFSETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGALLLFLFLMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIFMPLLHMSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPVTSTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLMMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHSPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-IIFALILSTMMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILSI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMVAVLPYNPTMTLLNLIIYIIMTSTMFMLFMTNSTTTTLSL---SHTWNKMPVMTVLILTTLLSMGGLPPLSGFMPKWMIIQEMTKNNSLILPTFMAITALLNLYFYMRLTYSTALTMFPSVNNMKMKW-QFSTMKKMTLL-------PTMIVLSTMLLPLTPILSVLE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWACQTNNLNTMLTMALFLISLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTYSLLISLTSL-LLMNQFSDNSLNFS-LMFFSDSLSAPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIYLQNITGSLNFLILQYWMQPLS-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMLLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQIFLPLMATWWLLASLTNLALPPTINLIGELFIVMSTFSWSNITMILMGLNMVITALYSLYMLITTQRGKYTYHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNLFSTF-TLITLLLLTIPIMTT---SSNSYKT-YNYPLYVKTT-IMYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFIMAMAWFLTNLNAWDLQQIFMLNPS-NSNMPLLGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSTLLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLVTINENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTIPQMTMPHYLKMMALAVTILGFILALEISNMTQNLK--FNYPSNAFKFSNMLGYFPTIMHRLTPYMNLTMSQKSASSLLDLIWLENVLPKTISLVQMKTST--MVTNQKGLIKLYFLS---FLITI--IISTILL----------NFHE---- +>Manis_temminckii_ground_pangolin +----MNENLFASFLTPM-MMGIPIVTIIIMFPIIMFPSPK-RLINNRIESMQQWLLQQTTKQMMSIHSYKGQTWTLMLMSLIIFIASTNLLGLLPYSFTATTQLSMNLGMAVPLWAATVITGFRHKTKMSLAHLLPQGTPTPLIPVLVIIETISLLIQPMALAVRLTANITAGHLLMHLIGSATLALMS-ISLTVATPTFIILVLLTILEFAVALIQAYVFTLLISLYLHDNTMPQLDTSTWFIMITSMF-LTLFILLQLKISKYNYPH-NAEIA-TKLDYKI-STP-W-MKKWTKIYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLIFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSVKWAPALLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKVHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTLWNTVSSMGSFISLTAVMLMVFMIWEAFASKREILMVELTDTNLEWLHGCPPPYHTFEEPAFVNP-MKQE-----MAHPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTNTMDAQEVETIWTVLPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTQDLKPGELRLLEVDNRLVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSHRPGLFFGQCSEICGSNHSFMPIVIEMVPLKTFENWSLSML----------MNHQTHSYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSMILLSLGLITNFLTMYQWWRDIVRESTFQGHHTMTVQKGLRYGMILFIISEIFFFIGFFWAFYHSSLAPTLELGGCWPPTGINPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMIQALLITISLGLYFTLLQISEYYEAPFTISDGVYGSTFFMATGFHGLHVIIGSSFLLVCFMRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNMRKSHPLFKIISNSFIDLPTPSNISAWWNFGSLLGMCLILQIMTGLFLAMHYTADTTTAFSSITHICRDVNYGWIIRYMHANGASMFFICLFIHIGRGLYYGSFTYKETWNIGIILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGPDLVEWIWGGFSVDKATLTRFFAFHFIFPFIITGLAMVHLLFLHETGSNNPMGLISNSDKIPFHPYYTIKDILGLFIMSMALMTLVLFFPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAMSILILAIIPSLQMSKQRTMMFRPLSQIMFWLLVANLLVLTWIGGQPVEHPFILIGQVASISYFTLILVMLPIASTIENKLM---K---------MS--------IINLLLTIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPWGLLQPIADAMKLFTKEPLRPLTSSIMMFIMAPAMALTLALTMWMPLPMPHPLININLGVLFMLAMSSLAVYSILWSGWASNSKYALIGAIRAVAQTISYEVTLAIILLSVLLMNGSFTLPTLIITQEKLWLLVPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNSLSTIIFLGATHSPYSPNLYTANLVTKVLILTMTFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHISVPIATSSI-P-PQT--MNP-LALILIMSTVFFSTTLVLISSNWLTIWVGFEMNMLAMIPILMKKFNPR-ATEAATKYFLIQATASMLLMAAITMNFIHSGEW--TVTKMCNTIPSTIITMAMAMKLGMSPFHFWMPEVTQGIPLSSGMLLLTWQKIAPISVLYQIMPTINLNLMLAM-ALLSILIGGWGGLNQTQLRKIMAYSSIAHLGWMMAIMLYNPNIAILNLLIYILMTLSTFMMLHHNSTTTTLSL---SHLSNKMPLMTIILLLILMSMGGLPPLSGFMPKWMIIQELTKNDMMLLPTLMAMMALLNLYFYLRLTYSTTLTMFPTPNNMKMTW-QFQHNKHMKLV-------SPLIILSTMILPLTPIMSILI---MN-LVMMMMINVLLASLLMLIAFWLPQLYIYSEKVTPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIVLLLPLPWASQTNQLNIMLITALLLLLLLAISLAYEWTQKG--LEWAE-MPSIHINIMLAFVISLAGMLMYRSHLMSSLLCLEGMMLSLFTMIAITSLNINFTLASMAPIILLVFAACEAALGLSLLVLVSNSYGTDYVQNLNLLRCMLKLIMPMLMMIPLTWMSNKNMIWINITSHSMLTSLISL-FVLSQHDNTNMNLS-LTFFLDPLSAPLLVLTTWLLPLMLMASQSHLSNETPNRKKLFISMLIILQTLLIMTFSSSEIMMFYILFEATLMPTLIIITRWGNQIERLNAGSYFLFYTMAGSLPLLVTLIYTQNMMGTLNLMLLQYWAKPMA-NSW-----TSTLMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKMGGYGMLRITPLLEP-TTTFMAYPFLILSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIAAIMIQTPWSYMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVVMSAFSWSNYTITLTGMNIIITAAYSLHMLTSTQRSKHTQYINNIKPSFTRENALMALHLLPILLLSINPKIILGLTY------MNTLMWL-SLTMLMMLSLPTLIN---PTHTLMN-KSYPVYVKNT-VAISFIISIIPMMMFIYLSEEMVIYNWHWMSIQTMKMTMSFKLDYFSVTFMSVALLVTWSIMEFSLWYMNSDPNIDKFFKYLLTFLITMMILVSANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAAMQAILYNRIGDIGFLLAMAWFFTKSNSWDLQQIFIINYE-NTNIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNKTMQTMTLCSGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFIHICTHAFFKAMLFMCSGSIIHNLENEQDIRKMGGLFHALPLTTSALIIGSLALTGMPFLTGFYSKDLIIESINMSYTNAWALSITLLATS-LTAAYSTRMVFLVLTGQPRFTALNAINENNPALTNSLKRLMLGSIFAGFLLLNYIPPTTTPLMTMPYYLKLTTLLVTVLGFIVALELCNLSTNLQ--HNEPSNTFKFSNSLGYFPTIIHRTAPMSTLVMSQKLASLMMDLTWLEKILPKATSHFHLQASS--LTSNHKGLIKLYFLS---FMMTI--TLALLTS----------NYLE---- +>Oryx_leucoryx_Arabian_oryx +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWMLQLVSKQMMSIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIVLILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQMKISKHNFHY-NPELT-SMEMPKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNMTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVDLTSTNLEWLNGCPPPYHTFEEPAYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNVGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGITSDTDKIPFHPYYTIKDILGALLLILVLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLVPALHMSKQRSMMFRPISQCIFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPVASVIENNFL---KW--------MF--------MINTLMLIIPVLLAVAFLTLVERKILGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQTWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPILLSSI-P-PQT--MNP-IIFIIILMTIMFGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALTMKLGMAPFHFWVPEVTQGISLSSGLILLTWQKLAPMSVLYQISPSINLNLIMIL-SVLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---AHTWNKAPIMTALVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFFTTKRMTLL-------PTMVILSTMMLPLTPILSTLE---MN-LMMALLTNLTLTTLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVHMNIMVAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTAMLVPLTWLSKNNMIWINPTLHSLLISLTSL-LLMNQFNDNSLNFS-LIFFSDSLSMPLLILTMWLLPLMLMASQHHLSKENLTRKKLFISMLILLQLFLIMTFTATELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIHIQDMMGSLNFLILQYWVQPVP-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLILNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVASTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINSISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-ALMTLLLLTAPIVMA---SSSTHKT-PNYPLYVKTT-VSCAFITSMIPTVMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSILEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAMLYNRIGDIGFVLAMAWFLTNLNTWDLQQIFMLEPN-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKPVQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLVATS-FTAIYSTRIIFFALLGQPRFMTLITINENNPFLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPHYLKLAALTVTILGFILALEISNMTYNLK--FNYPSNTFKFSNLLGYYPTIMHRLAPYMNLTMSQKSASSLLDLIWLENILPKTISSTQMKMST--VITNQKGLIKLYFLS---FLITI--LTSMILL----------NFHE---- +>Mustela_nivalis_least_weasel +----MNENLFSSFTTPT-MMGLPIVILITMFPGIMFPSPS-RLINNRLISIQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTITAMITFTILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-MTLFFMFQLKVSKYSFPE-NPEPK-LVAMSKS-STP-W-ENKWTKIYFP-HS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQVYNVIVTAHAFVMIFFMVMPIMLGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGSINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDVWAKIHFTIMFVGVNTTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVLTVELTSTNIEWLHGCPPPYHTFEEPTYVLS-K--------MAYPFQMGLQDAASPIMEELLHFHDHTLMIVFLISSLVLYIISVMLTTKLTHTSTMDAQAVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTIMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLTASGLVMWFHYNSMSLLTIGTAANMLTMYQWWRDVVREGTFQGHHTPTVQKGLRYGMILFITSELFFFVGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKYMLQALFITISLGLYFTVLQASEYYEAPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLTKIINNSFIDLPAPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYMFSETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALFLILTLMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILVLAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFVTIGQLASILYFMILLVLMPIISIIENNML---KW--------MF--------MVNIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFVVAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHSPYLPELYSINFTMKTLLLTISFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASI-P-PQT--MKP-PILTIIMFTIISGTIMVLMSSHWLTIWIGFEMNMLAIIPILMKKFNPR-AVEAATKYFLTQATASMLLMLGIIVNLLLTGQW--TVLNTPNPIVSNMMTVALSMKLGLSPFHFWVPEVTQGIPLTSGMILLTWQKIAPLSILYQMSPSMNPHLLTTM-AFMSVLVGGWGGLNQTQLRKILAYSSIAHMGWMIAVTTYNPTLMLLNLTIYIMMTLGTFMLFTLSSSTTTLSL---SIMWNKLPLITALILIIMLSLGGLPPLSGFVPKWMIIHELTKNNMILVPMLMSITALLNLYFYMRLTYATALTMFPSTNNMKMKW-QFESTKNMTLL-------PPLIVISTMLLPLTPMMSTLL---MN-MMLTMLINVSLASLLIMIAFWLPQLNIYTEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSINLKTTLTMALALISLLAASLAYEWTEEG--LEWNE-MSVVYINIFLAFTLSFMGLLIYRSHLMSSLLCLEGMMLSLFVMMTVTILANHFTLASMTPIILLVFAACEAALGLSLLVMISTTYGTDYVQNLNLLQCMLKIIIPTMMLIPLTWLSKPNMIWINTTAYGMLISLISL-TYLNQFTDNNLNFS-LLFFTDSLSTPLLVLTTWLLPLMLMASQHHLSKETLTRKKLYITMLVMLQLFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQTERLNAGMYFLFYTLVGSLPLLIALLWLQNNLGTLNLLIIQYWAQPLP-NSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMTMLLNP-LTSYMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAVLIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLVGELFVVMASFSWSNITIILMGVNIIITALYSLYMLITTQRGKYTHHIKNIKPSFTRENSLMALHLLPLLLLSLNPKIILGSIY---MKVINLFTSA-MLVTLLMLTLPIMMT---STTMYTN-KSYPQYVKTT-ISYAFMISLIPTMMFIHLGQDMMISNWHWITIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGLILAMAWFLTNMNTWDLQQIFMTNHE-NLTIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTIQTFTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSNTNAWALLLTLVATS-MTAAYSTRIMFFALLGQPRFNPIITINENNPLLINSIKRLLFGSIFAGFLISHNLTPTTTPQMTMPHYLKMMALAVTILGFILALELNLTTQSLK--FKYPSDLFKFSNMLGYFPTIIHRLMPKTNLLMSQKSASTLLDMTWLEKILPKSISHFQMKSSI--TISSQKGLIKLYFMS---FMLTL--ALSLLAL----------NFHE---- +>Microtus_kikuchii_Taiwan_vole +----MNENLFASFITPT-MMGLPIVIIIIMLPAMLMTSSK-RLVSNRFHSFQQWLIKLIIKQMMLIHSPKGRTWSLMLVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPLWAGAVILGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLTN-ISPPTATITFIILALLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITTLSAT-ITLFILMQLKISLHNFPQ-TPSIK-SIKHTKT-NNP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLDDMWAKTHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVLIMVFMIWEAFSSKREVLYVDHTSTNLEWLHGCPPPYHTFEEPAFVKV-K--------MAYPFQLGLQDASSPIMEELMNFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINDPALTVKTMGHQWYWSYEYTDYEDLSFDSYMTPTSDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGIKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKNFEDWSLSMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSTILLSLGLLGNSLTMYQWWRDVIREGTYQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLVPTHDLGGCWPTTGISPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNNMNQALFITIMLGVYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIICLLRQLKYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTVIRKKHPLIKMINHSFIDLPAPSNISSWWNFGSLLSLCLAVQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGVYYGSYNMIETWNMGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVLVHLLFLHETGSNNPTGLNSDSDKIPFHPYYTIKDLLGVIILLMVFMILALFFPDILGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPLLHTSKQRTLTFRPITQTMYWILVADLFILTWIGGQPVEYPFIIIGQTASIAYFAIIVILMPIAGMIENNIL---NLD------MVY--------FANILMLLVPVLIAMAFLTLVERKILGYMQLRKGPNIVGPYGVLQPFADAMKLFIKEPLRPLATSTTLFIIAPTLSLSLALSLWIPLPMPHPLVNLNLGILFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSFSIQSLIYTQEPLWLLIPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIILMNALSTIVFMGPLHDFMNPELYTTNFMIKTLTLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLASCMWYISMPIFTASI-P-PYT--MNP-ITLTTIYLTIMTGPMITMLSSNLFLMWIGLEMNLLALIPLMNNNPNPR-STEAATKYFLTQATASMIFLLSILMNFKQLGLW--TFQPETNNTIMVATFISLAIKLGLAPFHSWLPEVTQGIKLNVGLILLTWQKIAPLSILFQFHELINPTLLILS-ATTSVLIGAWNGLNQTQTRKILAYSSIAHMGWMISILPYNPSLTILNLLIYIIMTVPMFFIFHTHSFTSITSM---SLMWSKAPMTLPMISLILLSTGGLPPLTGFLPKWAIITELMKNNNLSLATLMAMTALINLFFYTRLIYSTSLTTFPSNNNSKMYT-HQNHTKNNNIL-------SPMMITSTLALPLSPLLL------MN-LMLILLTNITLTIALISVAFWLPHLNVYTEKANPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQLPNTNMLTIMAFILITILALGLAYEWTQKG--LEWTE-MSPAVLNITMAFTFSLLGTLMFRSHLMSTLLCLEGMMLSLFMLATITPLNTHSMIMFPIPIAILVFAACEAAVGLALLAKISNTYGSDFVQNLNLLQCMLKIILPSLMLLPLTWLSNNKKVWINVTAYSLLINLISI-NLLWQNNENSPSFS-TLFSADPLSAPLLVLTTWLLPLMLLASQNHIKKEPEYSKKLYISLLVCLQTLLIMTFSANELIMFYILFEATLIPTLIVITRWGNQTERLNAGIYFLFYTLVGSIPLLIALIYIQNSAGTLNFILMTLGSSPIN-QTW-----SNNILWLACIMAFMVKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRISVVLDP-VTKYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAIMIQTPWSFMGATALMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMVFPLMATWWIMASLANLALPPTINLIGELVITISMFSWSNPTIILLGTNILITSLYSIYMIVTTQRGKLTNHMNNLQPSHTRESTLMTLHILPIILLTINPKPIMGPSL------MNVITSS-VLLIFALLMFPMIIS---FTNMTKH-MDFPNYVTSC-IKCAFFISLIPLSSFFNSGTEVMLTDWQWLSIGSTKLWLSLKFDFFSIIFLPVALYVTWSIMEYSVWYMHSDPNLNRFIKYLLMFLITMIILTTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFILAMTWYCLKTSSLEFQQIFLM-DN-SNTLPLAGLLLAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLTSNNNTILTAMLCLGAMTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGLNQPHLAFLHMCTHAFFKAMLFLCAGSIIHSLNDEQDIRKMGGVAKSMPFTSSCLTIGSLALTGMPFLTGFYSKDLIIEAANTCYTNAWALLMTLVATS-MTAAYSMRIIYFVLMTKPRFPPTITINENNPLMINPIKRLALGSIMAGFFISYNIPPKILQTMTMPWYLKTMALMITIAGLVVALDLNNTTNNLK--PSKSTPKNSFSTSLGYFPTIMHRVLPLKSLNTSFKTALTTLDLIWLEKAIPKTISTIQTLTSS--AMSNQKGMVKLYFLS---FLVTL--ICIPVVLLI---------------- +>Hipposideros_armiger_great_roundleaf_bat +----MNENLFSSFITPT-MMGLPIVVLIVIFPSMLFPSTN-RLVNNRLIAIQQWLLHMTSKQMMMIHNHKGQSWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVLLGFRYKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALLG-ISTTTAFITFIILIMLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITILPMV-FTLFIIMQLKISNHIFHS-SPEPT-EVKSLKH-STP-W-EAKWTKICSP-LS-LPLL----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNMTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMVFMVWEAFASKREVASVELTTTNLEWMHGCPPPYHTFEEPTYVIP-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISVMLTTSLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPTLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKHFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSMLLLSLGLMTNTLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGLYFTLLQASEYYETPFTIADGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLFKIINDSFIDLPTPSSISSWWNFGSLLGMCLAIQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTYTETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWVWGGFSVDKATLTRFFALHFLLPFIITALVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLMLMLMALMSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAAIPLLHTSKQRSMTFRPISQCLFWLLVADLLTLTWIGGQPVEHPFILIGQLASILYFLIILVLLPLASIAENHLL---KW--------MF--------MINLLMMIVPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFTKEPLRPLTSSISMFIIAPILALTLALTMWTPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLLSGSFTLPTLITTQEHIWLIVPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNIFTTILFLGAFHNPLMPELYTINFVTKSMLLTISFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTMPIITAGV-P-PLT--MNP-FILIMISSTIILGTLIVMVSSHWLLIWIGFEMNMLAVIPMLMKRFNPR-AMEASTKYFLTQATASMLLMLAIIINLLYSGQW--TLTNMLDPTASTIMTLALSMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYQISPSINLDILLTI-SMLSIMVGGWGGLNQTQLRKILAYSSIAHMGWMTAILAYNPTMTLLNLVLYILMTTTTFMLFMYNSSTTTLSL---SHSWNKTPLITASILAMMLSLGGLPPLTGFIPKWMIIQELTKNDSIIMPTLMAITALLNLYFYMRLAYSTSLTMFPSTNNMKIKW-QFTSTKQMPCL-------APMIVISTLALPLAPMLSVLN---MN-LVLTLLTNTLLSSLLVIIAFWLPQTNVYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQANDLKTMLTMSLLLISLLAISLAYEWSQKG--LEWTE-MALIYMNTILAFTVSLLGLLLYRSHLMSSLLCLEGMMLSMFVMATVIILNAHLTLSSMVPIILLVFAACEAALGLSLLVMVSNTYGVDYVQNLSLLQCMLKIIIPTAMLIPLAWLSKHSMIWINSTVYSLLISLLSL-PLLNQFNDNSLNTS-LMFFSDSLSAPLLMLTMWLLPLMLIASQHHLSKESLTRKKLFITMLVLLQVFLIMTFTATELIMFYILFEATLLPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALMYIQNLVGSLNFLLMGYWMKPLS-TTW-----SNVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITIALTP-VTSSMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTIFPLMAAWWLLASLTNLALPPTINLIGELFVVMATFSWSSTSIILMGTNIVITALYSLYMLITTQRGKQTHHINNLPPSFTRENMLMAMHLLPLLLLSINPKIILGPLY------MNMSTPS-VLVSLLMLLAPIIST---TLNLHKN-NSYPHYVKTT-IAYAFTISLIPMMMFIQSGQETILSNWHWITIQTIKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHTDPYINRFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFLAAMAWFLFNSNTWDLQQIFSLNLN-NTNFPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLIENNYPIQSTILCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLFHTLPFTTTALTVGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALTITLIATS-LTAVYSTRIIFFALLGQPRFPTLIIINENNPYLMNSIKRLLIGSIFAGFLLTNNIVPMTIPQMTMPLYLKMTALSVTILGFTIAMDLNTATQNLK--FKRPLAPSKFSTLLGYFPTVMHRSLPLMNLILGQKMASLLLDLAWLEIALPKSISQLQMKTST--LISSQKGQIKLYFLS---FFLTL--ALTLLMF----------NFHE---- +>Macaca_nigra_Celebes_crested_macaque +----MNENLFTPFSAPT-ILNQPATIPIILFPTLLILTPK-HPINNRLATIQQDLTRFTLKQMMMTHNAKGQTWSLMLTSLITFIAMTNLLGLMPYSFTPTTQLSMNLAMAIPLWAATVMMGLRFKTKNSLAHLLPQGTPTPLIPMLVAIETISLLIQPVALAVRLTANITAGHLLMHLIGNAMLALST-TNLSMTLLTSTLLVLLTTLEIAVALIQAYVFALLISLYLHNNTMPQLDTSTWFTTIMAML-PTLYLIMQLKLLNTNHYQ-PPLTK-NPTLQSH-NTR-W-QPKWTKTCLP-LS-QPQQF---MLINRWLFSTNHKDTGTLYLLFGAWAGIMGTALSLLIRAELGQPGSLLGNDHIYNVIVTAHAFIMIFFTVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASAVVEAGAGTGWTVYPPLAGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQSPLFVWSILITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFMHWFPLFSGYTLNQTCAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTLSSMGSFISLVAVILMIYMIWEAFASKRKVLLIEQPLTSLEWLNGCPPPYHTFEEPAYIKL-V--------MAHPVQLSLQDATSPIMEELITFHDHAFMAMSLISFLVLYALLSTLTTKLTNTNITDAQEMETIWTILPAIILILIALPSLRILYLTDEVNDPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHAYHMVKPSPWPLTGALSAFLMTSGLVMWFHFYSTTLLMLGLLTNTLTLYQWWRDIVRESTYQGHHTTPVQKSLRYGMTLFIISEVFFFIGFFWAFYHSSLAPTPCLGGHWPPTGITPLNPMEVPLLNTSVLLASGVTITWAHHSLMNNDRKQTIQALLITILLGTYFTLLQISEYFEAPFTISDGIYGSTFFLTTGFHGLHVIIGSTFLFICFIRQLLHHFTSNHHFGFEAAAWYWHFVDVVWLLLYISVYWWGS--MTPMRKSNPIMKMINRSFIDLPTPPNLSMWWNFGSLLAACLVLQIITGLLLAMHYSPDTSSAFSSIAHITRDVKYGWVTRYLHANGASMLFICLFLHIGRGLYYGSYLLLETWNIGIMLLLMTMTTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGYAIDSPTLTRFFTLHFILPFIIIALTTVHLLFLHETGSNNPCGISSDSDKIVFHPYYTIKDILGLVLLLFILATLTLLSPNLLNDPDNYIPADPLNTPPHIKPEWYFLFAYTILRSIPNKLGGVLALFLSIFILAAIPMLHKSKQQSMMFRPLSQFLFWLLMTILLTLTWIGSEPVTQPLTTIGQVASMMYFITILILMPLASLIENNLL---KWT-------MT--------TVNLLLMIMSTLAAMAFLTLVERKLLGHMQLRKGPNIVGPCGLLQPFADAVKLFTKEPLKPATSTTILYIAAPALAFFIALLLWTPLPMPNALINFNLGLLFTLAMLSLIVYSILWSGWASNSNYALIGALRAVAQTISYEVTLTIILLSVLLMSGSFNLNTLITTQEHLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFLGTFYPIHWPELFTTCFTTKTLFLTSLFLWIRAAHPRFRYDQLMHLLWKNFLPLTLALLMWSTSMPIAISSI-P-PQT--MNP-LAQLIIYTTMITGTLITTLSSHWFLAWTGLEMNMLAFIPILMKKTNLR-STEAATKYFLMQSTASMILMMAIISNNLLSGCW--TTTNYISQPPSLMMTTALAMKLGMAPFHFWIPEVTQGTTLTSGLLLLTWQKLAPISIMYQIHPSINIHILLTL-STLSVAVGSWGGLNQTQLRKILGYSSITHMGWMMMTLVYNPTTTILYLTMYIILTTTMFLILNLSSSTTTLML---SRTWNKSTHLAPLTAPILMSLGGLPPLTGFLPKWIIIQELTMNNNFLIPSIMTIMTLLNLYFYMRLIYTTSLTLFPTSNNAKMTW-QLENTKPTLLI-------PPLIIISTLLLPISPLLLTFH---MN-LVLALMINTLLTSLLMVIMFWLPQLNPYTEKTSPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWAIQTTNLPMMIKSTIAFIIILILSLTYEWTQKG--LDWAE-MTLTYMNITLAFTISLLGMLTYRSHLVASLLCLEGMMMSLFIMAALIASNTHFPLINIMPIILLVFAACETAVGLALLISISNTYGLDYVHNLNLLQCMLKMIIPATMLLPMTWLSKNNTIWINLTMHSLAISLIPL-LFFNQTNTNLLNYS-TYLSSDPLTTPLLTLTIWLLPLMIMASQYHLCNEPPSQKKLFLFMTILLQITLILTFMATELIMFYILFETTLIPTLIIITKWGNQAKRLNASTYFLFYTLTGSLPLLIMLSHTYNNTGSLNITLLTLTDQKLT-TTW-----SHNFTWLACMMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTPILNP-LTEYMAYPFLMLSLWGMIMTS--LTCLQQTDLKSLIAYSSVSHMALVIVASLIQTPWSFSGATILMIAHGLTSSMYFCLANSNYERTHNRTMLLSRGLQILLPLTAFWWFTASLTNLALPPTINLLGELFVIATSFSWSHITIMLTGLNMLITALYSLHMFITMQRGTLTHHMINMKPPFTRENMLMFMHLAPIILLSLNPNIILGFTS--------MHTPI-MMTTLISLTLPIFAT---LINPYKK-RPYPDYVKTT-VMYAFIISLSSTTLFIFSNQETTIWSWHWMMTQTLDLTLSFKLDYFSMMFIPIALFITWSIMEFSLWYMNSDPNINQFFKYLLIFLTAMLILVTANNLFQFFIGWEGVGIMSFLLISWWYARTDANTAAIQAILYNRIGDIGLILAMAWFLLHCNSWDLQQMLALDLN-SNPLPLMGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMETNTMIQNLTLCLGAITTLFAAICALTQNDIKKIVAFSTSSQLG--LMMITIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIQKMGGLFKTMPLTSTSMIIGNLALTGMPFLTGFYSKDLIIEATNTSYTNAWALFITLITTS-LTSAYSTRTILLTLTGQPRFPALTNINENNPTLLNPIKRLTMGSMITGFLITNNIPPTSLPQPAMPLYLKLSALCATALGFLAALDLTLMTNKLK--MKNPSQMFKFSNMLGYFPTTIHRTIPYQNLLMSQNLALLLLDSTWLEKSMPKMISQTHITASM--AVTTQKGMIKLYSLS---FLIPL--TLALILMM----------------- +>Trachypithecus_pileatus_ +----MNENLFTPFTIPT-LLNLPAVVPIILFPMLLFPTSK-HLVNNRLIAIQQNLTQLILKQMMMIHNTKGRTWSLMLVSLITFIATTNLLGLLPHTFTPTTQLSMNLAMAIPLWAGTVITGLRFKTKNSLAHFLPQGTPTLLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGSAVLALST-INFLATSLTFVLLLLLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFIIIMTML-PALYLMMQLKLLNTNYYL-PPSQK-TPNTQVF-NNP-W-QLKWTKIYLP-HL-QSPHS---MLINRWLFSTNHKDIGTLYLLFGAWAGTVGMAMSLLIRAELGQPGSLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNLSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQVCAKAHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSTGSFMSLVAMLLMIYMIWEAFASKRKVLSIEQPTYNLEWLHGSPPPYHTFDEPTFIKA-K--------MAHPVQLGLQDATSPIMEELIAFHDHAFMIISLISFLVLYVLLSVLTTKLTSTNITDAQEMETIWTILPAIILVLIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAIPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGAFSALLMTSGLIMWFHFYSTTLLTLGLLTNMLTMYQWWRDIVRESTYQGHHTMPVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPHLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKQMIQALFITILLGIYFTLLQMSEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCLIRQLLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWDS--MTPLRKSNPIMKIINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWTIRYLHANGASMFFICLFLHVGRGLYYGSFLLTETWNIGIALLLMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSIDNPTLTRFFTLHFTLPFIIATLTALHLLFLHETGSNNPCGIPSNSDKIPFHPYYTIKDILGLIFLLLILTTLVLFSPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPMLHKSKQQSMAFRPLSQFLLWFLITILLTLTWIGSQPVSQPFIMIGQVASTMYFTTILILMPLASLIENNLL---K---------MF--------TMNILLVTLPAIAAMAFLTLTERKLLGYMQLRKGPNIVGPYGLLQPFADAVKLFTKEPLKPSTSTTTLYVIAPALAFTIALLLWMPLPMPNPLVDLNLGLLFILATSSLAVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSILLMSGSFNLRTLITTQEHLWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNTEYAAGPFALFFMAEYMNIIMMNALTTTIFLGTLYPIHSPELFTTCFITKTLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLAFLMWYISISITTSGI-P-PQT--MNP-LAQLVIYSTMLMGTIITLLSSHWFLAWAGLEMNMLAFTSILIKKTNPR-STEAATKYFLVQSTASMILMMAIMYNSLFPEQW--TMMNNINQLSSLLMTMALAMKLGMAPFHFWIPEVTQGTPLTSGLLLLTWQKLAPISIMYQIYSSINTNILLIL-SILSIMAGSWGGLNQTQLRKILAYSSITHMGWMMTTLTYNPNITIFYLLTYIILTTTAFLALSLNSNTTTLML---SHTWNKLTWLMPLMSSTLLSMGGLPPLTGFLPKWITIQELTKNNNFIIPTIMVIMTLLNLYFYLRLIYITSMTLLPTSNNTKMKW-QFENTKPTLLI-------PPLIILTTLLLPMSPTILTIP---MN-LVLVLTINTFLTLLLTIIMFWLPLLNPYAEKANPYECGFDPLNSARIPFSMKFFLIAITFLLFDLEIALLLPLPWALQTTNLPMMIKSSMTLIIILTLGLAYEWTQKG--LDWNE-MPIIYMNIMLAFLISLLGMLTYRSHLMSSLLCLEGMMLSLFIMSTLMALNTHFPLANVVPIALLVFAACEAAVGLALLISISNTYGLDHIHNLNLLQCMLKMILPTIMLLPMTWFSKNSMLWINLTMHSLVISLIPL-MFFNQTSSNLTSCS-TYLSSDPLSTPLLTLTAWLLPLMIMASQYHLHNESPSRKKLYLSMMIFLQISLIMTFMATELILFYILFETTLIPTLIIITRWGNQAERLNASTYFLFYTLTGSLPLLIMLTFTYNNMGSLNIVLLTLTAQKLT-TTW-----SHNLTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRFTSILSP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKALIAYSSVSHMALVIMASLIQTPWSFTGAIILMIAHGLTSSMLFCLANSNYERTHSRIMMLSRGLQTLLPLMAFWWFAANLTNLALPPTINLIGELLVVATSFSWSHVTIVLTGLNMLITALYSLHMFITTQRGLLTFHIINMKPSFTRENMLMFMHISPIILLSLNPNIIMGFTS--------MYASI-IMLMLTYLMLPIIMT---LIKPSKN-HLYPNYVKTI-MMFAFIFSLFPVTLYILLDQDVIISNWHWVTIQSLELTLSFKLDYFSMMFTPIALFVTWCIMEFSLWYMSSDPNINQFFKYLLIFLITMLILITANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAATQAILYNRIGDIGFVLAMAWFLLHYNSWDLQQMFILDSN-PNLLPLMGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNMLIQSLMLCLGAITTLFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKALLFICSGSIIHNLNNEQDIRKMGGLFKMMPLTSTSLTIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALSTTLIATS-LTSAYSTRTIILALTGQPRFSTSIYINENNPALLNPMKRLTLGSLLAGFLITNNIFPTTPPQLTTPLYLKLLALCVTTLGFLMALDLTLMTNNLK--MNIPSHMFKFSNMLGYFPTTIHRVIPYQNLMMSQNLAFILLDSIWLEKSMPKMISHIHITTSI--IMTTQKGMIKLYFLS---FLITL--TLIMLLTM----------------- +>Bos_mutus_ +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLVSNRFVTLQQWMLQLVSKQMMSIHNSKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFTILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKISKHNFYY-NPELT-STKMLKQ-NTP-W-ETKWTKIYLP-LL-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKAMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTALLMIGLTTNMLTMYQWWRDIIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITITLGVYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGVCLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITAIAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILALMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILALIPLLHTSKQRSMIFRPLSQCLFWTLVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPTAGTIENKLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSTSMFILAPILALGLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLIITQEQTWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNMFTAILFLGTSHNPHMPELYTINFIIKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILTSGI-P-PQT--MNP-IIFTTILLTIMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKNHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNLILTL-SILSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYITMTSTMFTMFMANSTTTTLSL---SHTWNKTPIMTILILATLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPLMKKMTFL-------PTMVVLSTMTLPLTPMLSVLE---MN-LMLALLTNFTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIILLAVSLAYEWTQKG--LEWTE-MSMVHMNIMMAFAVSLVGLLMYRSHLMSSLLCLEGMMLSLFVMAALTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWMSKGNMIWINSTTHSLLISFTSL-LLMNQFGDNSLNFS-LMFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNMVGSLNFLMLQYWVQPMH-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLILNP-MTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVMMSTFSWSNITIILMGMNMVITALYSLYMLIMTQRGKYTYHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-SLVTLLLLTVPIMTT---SLNTYKS-SNYPLYVKTT-ISYAFITSMIPTMMFIYSGQELVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLDPN-NSNTPLIGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKHIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSMIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGVPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFSTLININENNPLLINSIKRLLIGSLFAGYIISNNIPPTTVPQMTMPYYLKTTALIVTILGFTLALEISNMTKNLK--FHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKAST--LVTNQKGLIKLYFLS---FLITI--LISMILF----------NFHE---- +>Erignathus_barbatus_bearded_seal +----MNENLFASFTTPT-MMGLPIVILIILFPSILFPSPN-RLVNNRLTSIQQWLIQLTSKQMLSIHNHKGQTWALMLMSLILFIGTTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLLLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMD-ISTTTALITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFIVILSMI-LTLFITFQLKISKHLFPM-NPEPK-QTTPLKN-NTP-W-EEKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMLMAFMIWEAFASKREVAAVELTTTNIEWLHGCPPPYHTFEEPTYVVL-K--------MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSVYLLLLGLTTNTLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFISISLGIYFTLLQASEYYETSFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFMRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLIKIINSSFIDLPTPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFMETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFILPFVVLALAAVHLLFLHETGSNNPSGISSDSDKIPFHPYYTIKDILGALLLILVLMLLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIAPLLHTSKQRGMMFRPISQCLFWLLVADLLTLTWIGGQPVEHPYITIGQLASILYFAILLVFMPIASIIENNIL---KW--------MF--------MINIISLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSTTMFIMAPILALALALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPAWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIMMNIFTTLLFFGAFHNPYMPELYTINFTTKTLTLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIISASV-P-PQT--MKP-PILIIITTTVMSGTMIVLTSSHWLLTWIGFEMNMLAIIPILMKKYNPR-AMEASTKYFLTQATASMILMMGIIINLMFSGQW--TISKIPNPIASSLVTIALTMKLGMAPFHFWVPEVTQGIPLSSGMILLTWQKIAPLSVLYQISPSINPKLLITM-AIASVLIGGWGGLNQTQLRKIMAYSSIAHMGWMAIILTYNPTLMVLNLVIYITMTLSTFMLFMHNSSTTTLSL---SHTWNKLPLMTSLILTLMMSLGGLPPLSGFTPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTTLTMFPSVNNMKMKW-QFESTKKIILL-------PPLIIASTMLLPMTPMMSILE---MN-MVLTLFTNTILASLLMLIAFWLPQLNTYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHTDNLTTMLTMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYANIFLAFIMSLMGLLMYRSHLMSSLLCLEGMMLSLFVMMTVTILNNHFTLASMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLPCMLKIILPTMMLMPLTWMSMSSMIWINTTIYSLLISLISL-SFLNQPGDNCMNLS-LLFFTDSLSAPLLALTTWLLPLMLMASQHHLSKESPTRKKLFITMLILLQLFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQTERLNAGMYFLFYTLTGSLPLLVALLFVQNNMGTLNFLMIQLWTQPMS-NSW-----SNILLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLNP-LTSFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQVLLPLMAAWWLLASLTNLALPPSINLIGELFVVMASFSWSNITVILMGANIIITALYSLYMLITTQRGKYTHHIKNIKPSFTRENALMMLHLMPLLLLSLNPKIILGPIY------MNLFASS-IITSLFMLTLPIILT---STPIYKN-KLYPQYVKTT-ISYAFMVSMIPTTMFIYSGQEMIISNWHWMTIQTTKLTLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAVLYNRIGDVGFIMAMAWFLINLNTWEFQQIFITHHN-NLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNMMMQTITLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLGFLHICTHAFFKAMLFMCSGSIIHSLNDAQDIRKMGGLYKVLPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLLTLIATS-MTAAYSTRIMFFALLGQPRFSPMITTNENSPLLINSIKRLLLGSIFAGYLISYNITPTTTPQMTMPYYWKLTALAVTLLGFMLALELNLASQNLK--LTYPSNLFKFSNLLGYFPTIMHRYMPSINLSMSQKLASTLMDTIWLENTLPKSISYFHMKSSI--TVSNQKGLIKLYFLS---FIITL--ILALMMT----------NFHE---- +>Erythrocebus_patas_red_guenon +----MNENLLTSFTTPM-ILNQPATIPIILFPVLLIPTSK-HIVNNRLVTIQHNLVQLTLKQMMITHNTKGQAWSLMLMSLITFITMTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVITGLRFKTKDSLAHFLPQGTPTPLIPMLVMIETTSLLIQPVALAVRLTANITAGHLLMYLTGSAVLALLT-TSPFIALLTSTLLMLLTILEIAVALIQAYVFTLLINLYLHNNTMPQLDTSTWFTTIMTTL-FTLYIMMQLKLLNTNYYQ-TPLQK-NSNKQTL-NNP-W-QLKWTKIYLP-HS-RPQ-----MFISRWLFSTNHKDIGTLYLLFGAWAGVMGTALSLLIRVELGQPGSLLGNDHIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTVVEAGAGTGWTVYPPLAGNLSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPTMSQYQTPLFVWSILITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPTGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMSIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGIKVFSWLATLHGGNIKWSPAMLWALGFVFLFTIGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLNQTYAKIHFITMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSLGSFISLVATILMIYMIWEAFASKRKVSMIEHSPTNLEWLNGCPPPYHTFEEPTYIKL-NEKGESRTPMAHPVQLGLQDATSPVMEELITFHDYASMTISLISLLILYALFSTLTTKLTNTNITDAQEMETIWTILPAVILILIALPSLRILYLADEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFAL----------MAHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFYFSTLLMLGLLTTTLTLHQWWRDIVRESTYQGHHTMPVQKNLRYGMVLFIISEIFFFTGFFWAFYHSSLAPTPRLGGHWPPTGIIPLNPLEVPLLNTSVLLASGVTITWAHHSLMNNNRKQTIQALLITILLGTYFTLLQVSEYFEAPFTISDGIYGSTFFITTGFHGLHVIIGSVFLSVCLIRQLLYHFTSSHHFGFEAATWYWHFVDVVWLLLYISMYWWGA--MTPMRKSNPIMKMINHSLIDLPTPSNISMWWNFGSLLAFCLVLQITTGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIHYLHANGASMFFICLFLHVGRGLYYGSFLLLKTWNTGIMLLLMTMMTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGADLVQWIWGGYSIGNPTLSRFFTLHFILPFIITAFTIVHLLFLHETGSNNPCGISSDSDKITFHPYYTTKDILGMILLLFILTLLMLLPPDLLNDPDNYTPANPLDTPPHIKPEWYFLFAYAILRSIPNKLGGVLALFLSILILAITPMLHKSKQQSMMFRPLSQFLFWLLAMTLLTLTWVGGQPVSQPFITIGQIASTMYFATILILMPLASLIENKLL---KWI-------MT--------TMNLLLLIMSTLIAMAFLTLVERKLLGCMQLRKGPNIVGPHGLMQPFADAVKLFTKEPLKPWTSASTLYTIAPALAFSIALLLWTPLPMPNPLINFSLGLLFILATSSLIVYSTLWSGWASNSNYALIGALRAVAQMISYEVTLAIILLSILLMSGSFNLTTFITTQEHIWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNIEYSAGPFALFFMAEYMNIMMMNALTTTIFLNTFYDAHSPELFTTYFVTKTLLLTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLTWNISTPITIASI-P-PQT--MNP-LAQLIIYITMVTGTLTTLLSSHWFLAWAGLEMNMLAFIPIMIKKMNPR-STEAATKYFLMQSTASMILIMAIIFNSLLLGHW--TMTSNINHPSSLMMTTAIAMKLGMAPFHFWVPEVTQGTPLIPGLLLLTWQKLAPISIMYQIHPSTNTYILLTF-STLSIMMGSWGGLNQTQLRKIMGYSSITHMGWAMMTLAYNPTITILYLTTYIILTTTMFLTLNLNSSTTTLAL---TLTWNKSIQLMPLMTSTLMSLGGLPPLTGFLPKWITIQELTMNNSLIIPFIMVTMTMLNLYFYMRLIYTASLTLFPSPNNTKMKW-QLENTKLTLPI-------PTLTIISTLLLPIFPLTLNIP---MN-FVLALTTNTLLTLLLMTIMFWLPQLNSYAEKTNPYECGFDPLNPARIPFSMKFFLIAITFLLFDLEIALLLSLPWALQTTSLPTMISSSITLIVILTLSLAYEWTQKG--LDWVE-MSPIFMNIMLAFTISLLGMLAYRSHLMASLLCLEGMMMSLFIMTALMASNTHFSLANMVPIILLVFAACETAVGLALLVSISNTYGLDHIHNLSLLQCMLKMIIPTAMLLPMTWLSKNSMIWVNLTMHSLAISLIPL-LFFNQINSNLLNNS-TYLSSDPLTTPLLALTAWLLPLMTMASQYHMRNELPSQKKLYLSMMIFLQITLIMTFMATELILFYILFETTLIPTLIIITKWGNQAERLNASMYFLFYTLTGSLPLLIMLIYTYNNMGSLNIMLLTLTNQKLT-TTW-----SHNLTWLACTMAFMMKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMSLVIMASLIQTPWSFSGATVLMIAHGLTSSMLFCLANSNYERTHSRVMMLSRGLQALLPLMAFWWFAANLTNLALPPTINLMAELLVITASFSWSHITIMLMGLNMLITALYSLYMFITTQRGKLTHHTTNMKPSFTRENTLMFLHLAPIILLSLNPSIILGFTS--------MYTSI-MMTALVSLILPIIAT---LINPNKK-QSYPNYVKTI-TMYAFITSLIPMTLYLFLNQEATIWSWHWTTTQTLNLTLSFKLDYFSVMFTPIALFVTWSIMEFSLWYMNSDPDINRFFKYLLIFLIAMLILTTANNLFQLLIGWEGVGIMSFLLINWWYSRTDANTAAIQAILYNRIGDIGLILAMAWFLLYCNSWDMQQMLILNSN-SNPLPLMGLLLAAMGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVYLLIRFHPLMENNALIQNLTLCLGAVTTTFMAICALTQNDTKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCTGSIIHNLNNEQDIRKMGGLSKTMPLTSTSLLIGNLALMGMPFLTGFYSKDLIIEATNTSYTNAWALSITLIATS-LTSAYSTRMILFIITGPPRFPTLVNINENNPTMLNPIKRLMMASVITGFLITNNIPPTSLPQPTMPYYLKLSALCATILGFLMALDLTLMTNKLK--MNNPSQMFKFSNMSGYFPTTIHRMISYQNLLMSQNLALLLLDSMWLEKIMPKMTTHMHITASK--TVTTQKGMIKLYSLS---FLIPL--ILTLLLMM----------------- +>Chlorocebus_aethiops_Cercopithecus_aethiops +----MNENLFTLFATPM-ILNQPATIPIIMFPMLLIPTSK-HLINNRLITIQRNLVLFTLKQMMMIHNAKGRTWSLMLMSLITFITTTNLLGLLPHSFTPTTQLSMNLAMAIPLWAATVITGLRFKTKSSLAHLLPQGTPTLLIPMLVMIETISLIIQPVALAVRLTANITAGHLLMHLIGNATLTLLT-ISPPATSLVFTLLTLLTILEIAVALIQAYVFTLLISLYLHNNTMPQLDTSTWFITITTTL-PTLYLITQLKLLNTHYYQ-PPQQK-NSHKQTP-NNH-W-QLKWTKIYLP-YS-QLQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGIMGTALSLLIRAELGQPGSLLGSDHIYNVIXTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMGSTMIEAGAGTGWTVYPPLAGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPTGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMTWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSAAMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKAHFIIMFMGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVLSSIGSFISLVAVILMIYMIWEAFASKRKVSMTEQSPTNLEWLNGCPPPYHTFEEPAYVKL----------MAHPVQLGLQDATSPVMEELITFHDYAFMTISLISFLVLYALSSTLTTKLTNTNITDAQEMETTWTILPAIILILIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQSHAYHMVKSSPWPLAGALSALLTTSGLAMWFHFYSTTLLTLGLLTMTLTLHQWWRDIVRESTYQGHHTTPVQKNLRYGMVLFIISEVFFFTGFFWAFYHSSLAPTPYLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMNNNRKQTTQALLITILLGIYFTLLQISEYFEAPFTISDGIYGSTFFIATGFHGLHVIIGSTFLLICLIRQLLYHFTPNHHFGFEAATWYWHFVDVVWLLLYISIYWWGS--MTPMRKSNPIMKMINHSLIDLPTPSNISMWWNFGSLLAFCLILQIITGLFLAMHYSPDTSSAFSSIAHITRDVNHGWIIRYLHANGASMFFICLFLHVGRSLYYGSFLLLKTWNTGIMLLFLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWVWGGYSIGNPTLSRFFTLHFTLPFIITALTTVHLLFLHETGSNNPCGISSDSDKITFHPYYTIKDILGLILLLFILTALTLLSPDLLNDPDNYTPADPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALFLSILILSIIPMLHNSKQQSMMFRPLSQFLFWLLITTLLTLTWIGSQPVSQPFILIGQLASMTYFTTILILMPLTSLIENNLL---KWT-------MT--------TANLLLLAASTLTAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTMLYTIAPALAFSIALLLWTPLPMPNPLINFNLGLLFILAMSSLTVHSTLWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLTSGSFNLSMLITTQEHLWLLLPSWPLAMMWFTSTLAETNRTPFDXMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFLGTFYPTHSPELFTTCFTTKTLLLTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLAFLMWNILTPITISSI-P-PQT--MNP-LAQLTIYTTMITGTLTTLLSSHWFLAWAGLEMNMLAFIPILIKKTNPR-STEAATKYFLMQSTASMILMMAITLNNLLSGXW--MMASTTNQLSSLMVTAALAMKLGMAPFHFWIPEVTQGTPLIPGLLLLTWQKLAPISIMCQIHPSINTYALMTL-STLSIMAGSWGGLNQTQLRKIMGYSSITHMGWMMMTLTYNPTITTLYLTTYITLTTTMFLFLNLNSNTTTLTL---SLTWNKSPQLMPLTMFTLMSLGGLPPLTGFLPKWMTIQELAMNNNFIIPSIMVTMTLLNLYFYMRLIYTVSVSLFPTPNNTKMNW-QLENTKPTPLT-------PTLTIISTLLLPITPLILTVP---MN-LVLALTINTLLTSLLMITMFWLPQLNSYAEKTSPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWALQTTNLPMMIKSSTTLIIILALSLAYEWSQKG--LDWAE-MSPIFINITLAFTISLLGMLVYRSHLMASLLCLEGMMMSLFITIALMASNTHSPLINIMPITLLVFAACETAVGLALLVSISNTYGLDYIHNLNLLQCMLKMITPTIMLLPMTWFSTNNMIWINLTTHSLIISLIPL-LFFNQTNNNLLNHS-TYLSSDPLTTPLLTLTAWLLPLMMMASQYHLCNEPPSQKKLYLSTMIFLQIILILTFMATELILFYILFETTLIPTLIIITKWGNQAERLNASTYFLFYTLTGSLPLLIMLTYTYNNTGSLNTMLLTLTDQKLT-TTW-----SHNLVWLACTMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEYMAYPFLMLALWGMIMTS--SICLRQTDLKSLIAYSSVSHMSLVIMASLIQTPWSFSGAITLMIAHGLTSSMLFCLANSNYERTHSRIMMLSRGLQTLFPLMTFWWFTANLTNLALPPTINLIGELFVIMASFSWSHITIVLTGLNMLITALYSLHMFITMQRGKLTHHMINMKPPFTRENTLMFMHLTPIILLSLNPNIILGFTS------MTMHTSI-MMATLASLALPIITT---FINPDKN-QSYPNHVKTT-TMYAFITSLLPTTLYISLNQETTIWSWHWMMTQTLNLTLSFKLDYFSVMFTPIALFITWSIMEFSLWYMSSDPNINQFFKYLLIFLMTMLILTTANNLFQLFIGWEGVGIMSFLLIGWWHSRTDANTAAIQAVLYNRIGDIGFILAMAYFLLHYNSWDMQQMLTLN-D-SNPLPLVGLLLAAMGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVYLLIRFHPLMENNTLLQSLTLCLGAITTTFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLLIGNLALTGTPFLTGFYSKDLIIEAANTSYTNAWALFITLIATS-LTSAYSTRVILLTMTGSPRFPALMNINENNPTLLNPIKRLTMGSIITGFLITYNIPPTSLPQPTMPHYLKLSALYATILGFLMTLDLTSMTNKLK--MNNPSQMFKFSNMLGYFPTTIHRMIPHQNLLMSQNLALLLLDSMWLEKSMPKMVAHAHTTTSK--TITTQKGMIKLYSLS---FLVPL--ALTLLLMM----------------- +>Cercocebus_torquatus_collared_mangabey +----MNENLFTLFSTPM-VLGQPATIPIILFPMLLIPTSK-YLIKNRLTTIQQNLTQLTLKQMMTTHNTKGQTWSLMLMSLIIFITMTNLLGLLPYSFTPTTQLSMNLAMAIPLWAGTVIMGLRFKTKNSLAHLLPQGTPTLLIPMLVVIETISLLIQPVALAVRLTANITAGHLLMHLIGNTALALST-VNSSATLLIFTLLMLLTILEIAVALIQAYVFTLLTSLYLHNNTMPQLDTSTWFTTITTTL-PTLYLIMQLKLLNMNYYR-PPLTK-NLNLQTH-NNH-Q-QSKWTKIYLP-YS-QLQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGVMGTALSLLIRAELGQPGSLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTMLEAGAGTGWTVYPPLAGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIMNMKPPAMSQYQTPLFVWSILITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGANIKWSPAMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFIIMFMGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNILSSMGSYISLMAVILMIYMIWEAFASKRKVLLIEQPSTNLEWLNGCPPPYHTFEEPAYIKL-NEKGESRTPMAHPTQLGLQDATSPVMEELITFHDHALMAMSLISLLVLYALFSTLTTKLTNTNITDAQEMEIIWTILPAIILVLIAFPSLRILYLTDEVNNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQLHAYHMVKPSPWPLTGALSALLMTSGLIMWFHFYSTTLLMLGLLTNSLTLYQWWRDIVREGTYQGHHTTSVQKGLRYGMTLFIISEVFFFMGFFWAFYHSSLAPTPHSGGYWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMNSNRKQTIQALLITISLGIYFTLLQASEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLFICLIRQLLYHFTSNHHFGFEAAAWYWHFVDVVWLLLYISIYWWGS--MIPMRKSNPIMKMINRSLIDLPTPSNISMWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWTIRYLHANGASMFFICLFLHVGRGLYYGSYLLLKTWNIGVMLLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTDLVQWIWGGYTIGNPTLTRFFTLHFILPFIIITLTTVHLLFLHETGSNNPCGIPSDSDKIAFHPYFTIKDILGLTLLLLILMTLVLFSPDLLSDPDNYTPANPLNTPLHIKPEWYFLFAYTILRSIPNKLGGVLALFLSIFILAIIPMLHKSKQQSMMFRPLSQLLFWLLTATLLTLTWIGSQPMVQPLITIGQMASATYFITILILMPLTSLIENNLL---KWT-------MT--------TMNLLLLITSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFSIALLLWTPLPMPNALINFNLGLLFILATSSLTVYTILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSILLMSGSFNLNMLITTQEHLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTITIFLGTFYPTHSPELFTACFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMWNISMPIAISSI-P-PQT--MNP-LAQLIIYTTMITGTLITMLSSHWFLAWTGLEMNMLAFIPILIKKTNLR-STEATTKYFLMQSTAAMILMMGIISNTLLSGHW--MMTSYTSQLPSLMMTAALAMKLGMTPFHFWIPEVTQGTPLISGLLLLTWQKLAPISIMYQIHLSINTHVLLTL-SILSIMVGSWGGLNQTQLRKILGYSSITHMGWTMMTLTYNPTITFLYLIMYITLTTTMFLTLNLNSNTTTLML---SHTWNKSTHLMPLMASTLLSLGGLPPLTGFLPKWITIQELTMNDSFLIPSIMIIMTLLNLHFYMRLIYAISLTLFPTSNNTKMTW-QFENMKPTLFI-------PPLIITSTLLLPISPLILAIH---MN-LMLALMINTLLTLSLMIIMLWLPQLNSYAEKTNPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWALQTANLPMMTKSSMAFIIILILSLAYEWTQKG--LDWTE-MTPVHMNIALAFTISLLGMLTYRSHLMTSLLCLEGMMMSLFMMMTLIASNMHSLLINIMPIILLVFAACEAAVGLALLISISNTYGLDYVQNLNLLQCMLKMIIPTIMLLPMTWLSKNNNIWINLTTHSLTISLIPL-LFFNQTNNNLFSHS-THLSSDPLTTPLLMLTAWLLPLMTMASQYHLHNEPPSQKKLYLSMMIFLQITLILTFMATELIMFYILFETTLIPTLVIITKWGNQPKRINASTYFLFYTLTGSLPLLIMLIYTHNNTGSLNIMLLTLMNQKLT-TTW-----SHNFIWLACMMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILDP-LTEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMATLIQTPWSFSGAIILMIAHGLTSSMYFCLANSNYERTHSRIMLLSRGLQILFPLMTFWWFMANLTNLALPPTINLLGEIFTIAASFSWSHITITLMGLNMLITALYSLHMFITMQRGTLTHHLTNMKPPFTRENTLMLMHLAPIILLSLNPSIIMGFTP--------MPASI-MMTTLISLTLPILAT---LINPNKK-YSYPNYVKTT-VMYAFITSLLPTTLYIFSNQETIIWSWHWMATQTLDLTLSFKLDYFSMMFIPIALFITWSIMEFSLWYMNSDPNTNQFFKYLLIFLTAMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAAIQAILYNRIGDIGLILAMVWFLLHYNSWDFQQMLALNSN-SNFLPLTGLLLAAMGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNMLIQSLMLCLGAITTLFAAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLTIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALFTTLIATS-LTSAYSTRTILLTLTGQPRFPASTNINENHPALLNPIKRLTMGSMITGFLITNNIPPASLPQPTTSLYLKLSALYATALGFLMALDLTLMTNNLK--MKNPSQTFKFSNMLGYYPTTIHRMIPYQNLLASQNLALLLLDSMWLEKSMPKTISQMHITAST--TVTSQKGMIKLYFFS---FLIPL--ILTTFLMM----------------- +>Anoura_caudifer_tailed_tailless_bat +----MNENLFASFITPT-MMGLPIVVLIIMFPTMLFPSTN-RLINNRLVAIQQWLLHLTSKQMLSIHNNKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTATALITFIILMLLTILEFAVALIQAYVFTLLISLYLHDNAMPQLDTSTWFITIFSTI-ITLFIIMQLKISSYNYPH-NPEPK-TAKITKS-LTP-W-NTKWTKIYSP-LS-LPLQ----MFISRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGVGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNSTWAKIHFLVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMVWEAFAAKRGVSIAELTTTNIEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFMISSLVLYLISSMLTTRLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPLMTVKTMGHQWYWSYEYTDYAELCFDSYMIPTPDLKMGDLRLLEVDNRVVLPMETTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVTLKCFEKWSASML----------MTHQSHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSVSLLMLGVLTNTLTMYQWWRDIVREGTFQGHHTPVVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLNPLDMPLLNTSVLLASGVTITWAHHSLMEGNRKHMLQALFITICLGLYFTLLQASEYYETPFTIADGIYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIINNSLVDLPAPSNLSAWWNFGSLLGVCLAVQILTGLFLAMHYTPDTTTAFNSVTHICRDVNYGWVLRYFHANGASMFFICLYMHVGRGLYYGSYTYSETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFLFPFIVAALVMVHLLFLHETGSNNPTGIPSDPDMIPFHPYYTIKDILGFLIMLTVLSSLVLFSPDLLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILAIIPILHTSKQRSMMFRPLSQSLFWTLVAVLLTLTWIGGQPVEHPYIIIGQLASLLYFLILLVFMPLVSMLENYLL---KW--------MY--------FINLLTTIVPILLAVAFLTLVERKILGYMQLRKGPNVVGPHGLLQPIADAVKLFTKEPLHPSTSSTTMFITAPILALTLALTMWIPLPMPHPLINMNLSVLFLLAMSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSYSLSTLIITQEYMWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTTILFLGTYNNPAIPELYTINFAAKTLLLTMMFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHITMPITTATI-P-PQT--MNP-IIFSLIMSTVILGTIIVMTSSHWLTVWIGFEMNMLAMIPVLMKNHHPR-STEAATKYFFTQATASMLLMLAVVINLLYSGQW--TITNMINPTALNILTLALGMKLGLSPFHFWVPEVTQGIPLTSGLLLLTWQKLAPLSIMCTISSNINLDMLLTL-SILSVLIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMTYNPTMTLLNLTIYILMTTTMFMLLTMTATTTTLSL---SHTWNKMPLITIIILTTLLSLGGLPPLTGFMPKWMIIQELTKNDSLILPTMMAITALLNLYFYMRLTYATSLTMFPTMNSTKIKW-HFNNMKQTPYL-------PPLIILSTMTLPLTPMMAILH---MN-LAITLLTNTLLASLLVTIAFWLPQTNTYTEKTSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLQTMLPTALVLISLLAISLAYEWSQDG--LEWSE-MSLVYMNMLTAFTISFIGLLMYRSHIMSSLLCLEGMMLSLFVMMTVTILNNHMMLASMLPIILLVFAACEAALGLSLLVMVSTNYGIDYVQNLNLLQCMLKIIIPTIMLIPLTWISPPKMIWINTTTHSLMISILWI-PLINQFTDNSLNLS-PMFFSDSLSTPLLMLTMWLLPLMIIASQFHLINETLTRKKLYITMLILLQIFLIMTFTATELIMFYILFEATLLPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALVHLQNSIGTLNFLLMQYWIKPLP-TSW-----DSTFLWLACMLAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITILLDP-FTKSMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMMFCLANSNYERVHSRTMLLARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVMMSMFTWSSFSLILLGLNIIITALYTLYMLITTQRGKHTPHINNISPSYTRENTLMTMHLLPLLLLSIKPMIILGTPY------MNLMSLM-MFLSLIMLTIPILTT---ILNPQNH-PNFPYYVKTM-VFYSFLISLIPMTMFMYSNQEMMISNWHWTSIQTLKMSLSFKLDFFSALFMPVALFVTWSILEFSMWYMKSDPNIDRFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAIIYNRIGDVGFVLSMAWFLVNFNTWELQQIFLLNSN-VTPLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNPMVQTMTMCLGAITTLFTALCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLLKTMPFTTTAMTVGSLALTGTPFLTGFYSKDLIIEAANTSYTNAWALILTLIATT-FTAIYSTRIIFFALLGQPRLPTLILINENNPLLLNAIKRLLIGSIFAGFLISKNIPPMTIPPMTMPLYLKLTALAVTLMGFILALELNTTTLNLK--FNPPSNMIKFSNLLGYFPTIIHRLTPMMNLTMSQKSASMLLDLSWLEIILPKTISFTQLKSSI--LVSNQKGLIKLYFLS---FLITL--SLALMLL----------IPHA---- +>Odocoileus_virginianus_white-tailed_deer +----MNENLFASFITPM-ILGLPLATLIVIFPSLLFPTSN-RLVNNRLISLQQWVIQLVSKQMMGIHNTKGQTWTLMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTXLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISTTMALTTFIILVLLTVLEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFMMIMSMF-LTLFIIFQLKVSKHNFFF-NPEPT-STKMQKQ-NTP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGVLLLVLFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEHPFITIGQLASILYFLIILVLMPVISTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSVSMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLMMNGSYTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-IIFILILSTMMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIYPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMAILILVTLLSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTFMAITALLNLYFYMRLTYSTALTMFPSMNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSVLE---MN-LILALLTNFTLASLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWACQTDNLSTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNTHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTVMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYLQNITGSLNFLILQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTMFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENAIMSLHILPLLLLSLNPKIILGPLY------MNLFSCF-SLITLLLLIIPIMTT---SSNIYKT-YNYPLHVKTT-ISCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTVKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLNPN-NSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLMNINENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTITQMTMPHYLKMTALAVTILGFILALEVSNMTQNLK--FNYPSNAFKFSNMLGYFPTIMHRLTPYMNLTISQKSASSLLDLIWLESILPKTTSLMQMKMSV--MVTNQKGLIKLYFLS---FLVTI--IISTILL----------NFHE---- +>Odocoileus_hemionus_mule_deer +----MNENLFASFITPM-ILGLPLATLIVIFPSLLFPTSN-RLVNNRLISLQQWAIQLVSKQMMGIHNTKGQTWALMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISTTMALTTFIILVLLTVLEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFMMIMSMF-LTLFIIFQLKVSKHNFFF-NPEPT-SIKMQKQ-NTP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITIALGIYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGVLLLILFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEHPFITIGQLASILYFLIILVLMPVISTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSVSMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLMMNGSYTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-IIFILILSTMMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIYPSINLNMILII-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMAILILVTLLSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTFMAITALLNLYFYMRLTYSTALTMFPSMNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSVLE---MN-LILALLTNFTLASLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWACQTDNLSTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNTHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTVMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFGDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALVYLQNITGSLNFLILQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTMFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNIPPSFTRENAIMSLHILPLLLLSLNPKIILGPLY------MNLFSSF-SLITLLLLIIPIMTT---SSNIYKT-YNYPLHVKTT-ISCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTVKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLNNLNAWDFQQIFMLNPN-NSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFSTLMNINENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTITQMTMPHYLKMTALAVTILGFILALEVSNMTQNLK--FNYPSNAFKFSNMLGYFPTIMHRLTPYMNLTISQKSASSLLDLIWLESILPKTTSLMQMKMSV--MVTNQKGLIKLYFLS---FLVTI--IISTILL----------NFHE---- +>Balaenoptera_borealis_sei_whale +----MNENLFAPFMIPM-MLGIPITTLIIILPSVLFPTPN-RLINNRTISIQQWLTKLTSKQLMNVHSPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNMGMAIPLWAGTVATGFRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGETTLVLMN-TSPFTALITFTILALLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLLTILSMF-LALFMLFQLKISKHSYSP-SPKLV-FTKTQKQ-QTP-W-NTTWTKIYLP-LL---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFMIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFTSKREVLAVDLTSTNLEWLNGCPPPYHTFEEPAFVNP-KWS------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEVNNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVILPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLEIFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMVLLTLGLSTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIALGLYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNDAFVDLPTPSNISSWWNFGSLLGLCLITQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYAHMGRGLYYGSYAFRETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAMVHLIFLHETGSNNPTGIPSDMDKIPFHPYYTVKDILGALLLILTLLMLTLFAPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILALIPMLHTSKQRSMMFRPFSQFLFWVLVADLLTLTWIGGQPVEHPYVIVGQFASILYFLLILVLMPATSLIENKLM---KW--------MF--------MINILMLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPVLALALALTMWSPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLATTQEQLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTAILFLGAFHNPYNPELYTTNLIIKTLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI-P-PQT--MNP-SIFIILLTTLILGTMLVITSSHWLLAWIGFEMNMMAFIPIMMKTPSPR-ATEASTKYLLTQATASALLMMAVIINLMYSGQW--TITKLFNPTASTLMTVALAIKLGLAPFHFWVPEVTQGIPLTTGLILLTWQKLAPLSILYQISPSINLYLMLIM-SLLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILPYSPTLMLLNLLIYIMMTFTMFMLFIQNSTTTTLSL---AQTWNKTPIITTLTMLTLLSMGGLPPLSGFMPKWMIIQELTKNDLLIMPTFMAITALLNLYFYMRLTYSTALTLFPSTNNMKMKW-QFYPTKRATLL-------PTAIVISTMLLPLTPMLSILL---MN-LLLTLLTNTTLALLLVFIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQSNNLNTMLTMALFLISLLAASLAYEWTQEG--LEWAE-MTLIHMNVLMAFSMSLVGLLMYRSHLMSALLCLEGMMLSLFTLAALTILNSHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQSLNLLQCMLKFIIPTIMLMPLTWLSKNNLIWINSTAHSLLISFSSL-LLLNQLNDNSLNYS-LIFFSDPLSTPLLMLTMWLLPLMLMASQSHLIKEPPVRKKLYITMLITLQALLIMTFTATELILFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALVYLQNTTGSLNFLLLQHWAKPLS-ISW-----SNIFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSMLNP-LTEHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQVLLPLMATWWLLASLTNLALPPTINLIGELLVVMSVFSWSNPTILLMGANIVITALYTLYMLIMTQRGKHTHHINNITPSFTREHTLMALHIIPLLLLSLNPKIILGPLY------MNLFTSF-TLLTLLILFAPIMMS---NTDPHKN-NKYQSYVKNT-VFCAFITSLIPAMMYLHTNQEALISNWHWITIQTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLLASMAWFLSNMNTWDLQQIFMLNQN-PLNFPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLMENNSLAQTVALCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPFTTTALIIGCLALTGMPFLTGFYSKDPIIEAATSSYTNAWALLLTLTATS-LTAVYSTRIIFFALLGQPRFPPSTIINENNPLLINPIKRLLIGSIFAGFILSNSIPPTTTPLMTMPLHLKLTALAMTTLGFIIAFEINLDTQNLK--YMYPSNSSKFSTLLGYFPTIMHRLPPHLDLLMSQKLATSLLDLTWLETILPKTTALIQLKAST--LTSNQQGLIKLYFLS---FLITI--TLSMILF----------SYPE---- +>Meles_anakuma_Japanese_badger +----MNENLFSSFITPT-MMGLPIVIIIIMFPSILFPSPN-RLINNRLISIQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVIVGFRHKTKASLAHFLPQGTPLLLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGSATLALMN-ISTTTAMVTFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITILSMI-ITLFLMFQLKVSKYNFPE-NPEQK-SVFVPKT-NTP-W-EKKWTKIYFP-LS-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDIWAKIHFTIMFVGVNTTFFPQHFLGLSGMPRRYSDYPDAYTAWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVLTVELTSTNVEWLHGCPPPYHTFEEPTYVLS-K--------MPYPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKAMGHQWYWSYEYTDYEDLNFDSYMVPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMATRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLVMWFHFNSIYLLTLGITTNLLTMYQWWRDIIREGTFQGHHTPTVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGYRKHMLQALFITISLGLYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLTKILNNSFIDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYMFPKTWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWVWGGFSVDKATLTRFFAFHFILPFIISALAAIHLLFLHETGSNNPSGIPSNSDKIPFHPYYTIKDILGTLLLVLTLMILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPYVAIGQLASILYFMILLILMPATSIIENNLL---KW--------MF--------MINIISLIVPILLAVAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAVKLFIKEPLRPLTSSITMFVMAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLIITQEHLWLVLPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHVPYLPELYSINFTMKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYMALPIMTASI-P-PQT--MKP-PILIIIMSTVILGTIMVLTSSHWLMVWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQTTASMLLMLGIIVSLLLSGQW--TMLNSPNSITSNMMTIALAMKLGLSPFHFWVPEVTQGVPLSSGMILLTWQKIAPLSVLYQISPSINPSLLMTM-AIMSVLVGGWGGLNQTQLRKILAYSSIAHMGWMIAVTTYNPTLMILNLMIYITMTLGTFMLFTLSTSTTTLSL---SRTWNKFPLITSLILMVMLSLGGLPPLSGFIPKWMIIHELTKNDMVITAMLMAMTALLNLYFYMRLTYATALTMFPSTNIMKMKW-QFENMKTMTFL-------PPLIVISTMLLPLTPMTLALL---MN-MLLTLLINASLASLLVLIAFWLPQLNIYTEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSINLNTTLTMALALILLLATSLAYEWTEEG--LEWNE-MSMVYINILLAFSLSFMGLLIYRSHLMSSLLCLEGMMLSLFVMMTVTILVNHLTLASMAPIILLVFAACEAALGLSLLVMISNTYGTDYVQNLNLLQCMLKIIVPTMMLIPLAWLSKPNMIWINTTAHSMLISLISL-TYLNQLVDNNLNFS-LLFFVDSLSAPLLILTTWLLPLMFMASQHHLSKETLTRKKLYITMLTMLQLFLIMTFTATELIMFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLWTQNNLGTLNLLVIQYWAQPLL-NSW-----SNALLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLNP-LTHLMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAILIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQMLLPLMAAWWLLASLTNLALPPTINLVGELFVVMASFSWSNITIALMGINITITALYSLYMLITTQRGKYTHHIKNIKPSFTRENSLMALHLLPLLLLSLNPKIILGPIY------MNLFTSS-ILVTLFMLIIPIMMT---NTTMYTN-KLYPQYVKST-ISYAFMISLIPTMIFLHLGQDMMISNWHWITIQTMKMSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPHINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLSNLNTWDLQQIFMTDHE-NLNIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKLMQTITLCLGAMTTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLFKALPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLVATS-MTAAYSTRIMFFALLGQPRFNPTIMINENNPLLINSIKRLLFGSILAGFLISHNITPTTIPQMTMPYYLKTTALAVTILGFILALELSLTTQSLK--FKHPSSLFMFSNMLGYFPTIIHRLMPKTNLFMSQKSATTLLDMTWLEMMLPKSISQFQMKSSI--TISNQKGLIKLYFMS---FILTL--VLSLLAL----------NFHE---- +>Palaeopropithecus_ingens_large_sloth_lemur +----MNENLFASFITPT-IMGIPIVILIVMIPSIMFPSST-RLITNRLISLQQWLVQLVLKQLMMMHSIKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAATVFTGFRHKTKATLAHLLPQGTPLPLIPMLVVIETISLLIQPMALAVRLTANITAGHLLMHLIGGATLVLTS-ISSTVASITFIILVLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITILSMI-LTLFIIFQLKISKLNYPL-NPELN-ITSEHKH-ANP-W-EMKWTKIYLP-LS-LPQQS---MFINRWFYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSIGSFISLTAVMLMIFMIWEAFASKREVLTVELTPTNLEWLHGCPPPYHTFEEPAYVKA-Y--------MAFPVQLGFQDAASPIMEELLYFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEITTPSLTLKTMGHQWYWSYEYTDYENLCFDSYMTPPSDLKPGELRLLEVDNRVVLPTELSIRMLISSEDVLHSWTVPSLGVKTDAIPGRLNQATLMSSRPGVYYGQCSEICGANHSFMPIVLELVPLKYFEEWLLSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSNTLLSLGLLTNSLTMYQWWRDVVRESTFQGHHTQLVQKGLRYGMILFIISEIFFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPFEVPLLNTAVLLASGVSITWAHHSLMEGNRIHMLQALSITISLGIYFTLLQASEYFETSFTISDGVYGSTFFVATGFHGLHVIIGTTFLIVCLLRQFKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIMNSSFIDLPTPSNISSWWNFGSLLGACLALQIVTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFLCLFVHVARGMYYGSFTLSETWNIGIILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMVHLLFLHETGSNNPLGIPSDSDKIPFHPYYTIKDLLGLIILILLLMTLVFFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTFSILILAIIPLLQTAKQQSMAFRPLSQCMFWTLAADLLILTWIGGQPVEYPFITIGQVASILYFSLILIAMPVVSLIENKML---KW--------MF--------MLNLFLLIIPILLAMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYVIAPTLALFIALTMWVPLPLPHPLINMNMGLLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEYMWLIIPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGTLYNSNMPQAYSTTFATKTLLLVTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLAMCMWYISLPILTSGI-P-PQM--MNP-VALMFIMTTVFMGTIITMISSHWLLIWVGLEINMLAIIPVLTKKTNPR-STEAATKYLLTQATASMLLMMTIVINAMHSGQW--NIINTHNPFNSLMIIIALTMKLGMAPFHFWVPEVTQGIPLTAGMLLLTWQKLAPISIMLQIHPSMNLNILLLL-ALSSILVGGWGGLNQTQLRKILAYSSIAHMGWMTAILMYCPSLTILNLLIYLMLTTAVFTMLNINSDTTTLTL---SSLWNKNPTITLMILISLMSLGGLPPLTGFLPKWVIVQEFTKNNNIIMATIMAIMALLNLYFYMRLIYSTSLTMFPTSNNMKMKW-QLQPVKLTLFL-------SPLITLSALSLPLSPILLTLN---MN-LSLTLVTDIILALLLVTIAFWLPQLNVYTEKHNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLKLMLTVTLVLISVLAAGLAYEWSQKG--LEWQE-MPSISINIILAFTTALLGILMFRSHLMSSLLCLEGMMLSMFILSTLVILSSHLTTSFMMPILLLVFAACEAAVGLALLVMVSNTYGLDYVQNLNLLQCMLKIIIPTIMLLPVAWYSNNSMMWINTTSYSLMISFVGL-SFLNQPNNDNNNFS-LTFFSDPLSSPLLVLTMWLLPLMIMASQHHLTKEPSLRKKSYLSMLIFLQMFLVMTFTANELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALTYTQNSMGSLNLLTMTLWLKELP-TSW-----SNNLLWMACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRIIMILDP-VTKSMAYPFLMLCLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQALLPLMATWWLLASLTNLALPPSINLIGELFVTMASFSWSNITIILIGSNIFITALYSLYMLISTQRGKPTYHTHNLSPSLTRENTLMSMHLLPLMLLSLNPKIILGPTF------MNLFSSF-ALITLMILMLPIILD---LTFNNKD-FPYASYVKSS-IACAFATSLIPTMLFMFSGQEMIISNWHWMTIQTMKLTLSFKLDYFSMLFIPVALFVTWSIMEFSLWYMSTDPNINQFLKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILTMAWFLLYSNTWEFQQMFMLNQN-PSTVPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLIENNKTAQTMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKAMPFTSSSLIIGSLALTGMPFLTGFYSKDLIIESANTSNINAWALTITLIATS-MTASYSTRIIFYALMNQPRFTTTIIINENNPLLINSIKRLTFGSILAGFLLSNNILPMDITQMTMPTYLKLTALTVTITGFILAAELNIMTNNLK--FKLPSDMFKFSELLGFYPMTTHRLIPSLNLSMSQNTASLLLDLIWLEKSMPKNLSQLHMTSSM--AISNQKGMIKSYFIS---FFTSI--LLTILLII----------------- +>Equus_kiang_kiang +----MNENLFASFATPT-MMGLPIVILIIMFPSILFPSSN-RLINNRLISIQQWLIQLTSKQMMAIHNNKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVFMGFRHKTKAALAHFLPQGTPIFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISPSTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFINIVSMF-LTLFIVFQLKISKHSYLT-HPEAK-TTKMTKH-LTP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLALPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMIWEAFASKREVSTVELTSTNLEWLHGCPPPYHTFEEPAYVNL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISSMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAIPSLGLKTDAIPGRLNQTTLVASRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEEWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTLLLALGLLTNILTMYQWWRDIIRESTFQGHHTSTVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMLQGLFITISLGVYFTLLQASEYYEASFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHETGSNNPSGIPSDMDKIPFHPYYTIKDILGLLLLILLLLTLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALIPTLHMSKQRSMMFRPLSQCVFWLLVADLLTLTWIGGQPVEHPYVIIGQLASILYFSLILIFMPLASIIENNLL---KW--------MF--------MINILLLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADALKLFIKEPLQPLTSSTSMFIIAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLIITQEYLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNIFTTTLFLGAFHNPYLPELYSINFTIKALLLTCSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMLSSI-P-PQT--MNP-LILTAILMTVFLGTMIVMMSSHWLMIWIGFEMNLLAIIPILMKKYSPR-AMEASTKYFLTQATASMLLMMAIIINLMHSGQW--TITKVFNPTASIIMTSALAMKLGLTPFHFWVPEVTQGISLTSGLILLTWQKLAPMSILYQISPSINLNILLTM-AVLSILVGGWGGLNQTQLRKIMAYSSIAHMGWMTAILAYNPTLTMLNMLIYIMMTLTMFMLFIHSSSTTTLSL---SHTWNKMPLITTLILITLLSMGGLPPLSGFMPKWMIIQELTKNNSIILPTLMAIMALLNLYFYMRLTYSTSLTMFPSTNNMKMKW-QFE-TKQIILL-------PPLIVASSLLLPLTPMLSILD---MN-LMLTLLTNTLLASLLVLIAFWLPQLNIYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLIMALILISLLAISLAYEWTQKG--LEWTE-MSLVHINIFLAFTVSLVGLLMYRSHLMSSLLCLEGMMLSLFVMATMMVLNTHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGVDHVQNLNLLQCMLKIIIPTIMLMPLTWLSKKNMIWINATTYSLLISLISL-PLLNQPNNNSLNFS-LMFFSDPLSAPLLVLTTWLLPLMLMASQHHLSKEPLIRKKLYITMLTMLQTFLIMTFTATELISFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALISIQNLTGSLNFLLIQYWNQALP-DSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTLLNP-QTNFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSNITIILMGANITITALYSLYMLITTQRGKHTHHINNIKPSFTRENALMALHMTPLLLLSLNPKIILGFTY--------MFSSL-MLVSLSMLILPIMSS---ILNTHKN-SAYPHHVKNI-ISYAFITSLIPTMMFIHSGQETIISNWHWVTMQTLKLSLSFKLDYFSMVFVPVALFVTWSIMEFSLWYMHSDPYITRFFKYLLTFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFIMAMAWFLFNTNTWDLQQIFMLDPS-LTNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQSLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFNAMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-LTAVYSTRIIFFALLGQPRFLPLTSINENNPLLINSIKRLLIGSIFAGFFISNNVYPTTVPEMTMPTYMKLTALAVTILGFTLALELSLTTHNLK--MEHPTDMFKFSNLLGYYPTIMHRLPPLTNLSMSQKSASLLLDSIWLESILPKSISQFQMKTSI--LISTQKGQIKLYFLS---FLITL--TLSMLLF----------NLHE---- +>Rhinopithecus_bieti_black_snub-nosed_monkey +----MNENLFTPFMTPT-LLGLPAVVPIILFPTLLFPTSK-HLISNRLITIQQNLIQLIMKQMMMIHNAKGQTWSLMLMSLIIFIATTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVITGLRFKTKNSLAHFLPQGTPTPLIPMLVVIETISLFIQPMALAVRLTANITAGHLLMHLIGSATLALLT-ASFLATSLTLVLLVLLTILEMAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFITIMTML-PALYLIMQLKLLNTNYHF-SPLQKEVSNTQVF-NNS-W-QLKWTKIYLP-HL---------MLINRWLFSTNHKDIGTLYLLFGAWAGTMGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLIASAMVEAGAGTGWTVYPPLAGNFSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQVCAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSMGSFISLVAMLLMVYMIWEAFASKRKVLLIEQPTSNLEWLHGSPPPYHTFDEPTFIKV-K--------MPHPVQLGLQDATSPIMEELIAFHDHVFMIVSLISFLVLYVLSSVLTTKLTNTNITDAQEMETIWTILPAIILILIALPSLRILYLTDEVNNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPSLGLKTDAIPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGALSALLMTSGLIMWFHFYSSTLLVLGLLTNTLTMYQWWRDIVRESTYQGHHTMPVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPYLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKQMIQALLITILLGVYFTLLQISEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTVCLVRQLLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTPMRKSNLIMKMINHSLVDLPTPSNISAWWNFGSLLATCLMLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLIETWNIGIALLFMVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNIVQWVWGGYSIDNPTLTRFFTLHFTLPFIIAAFTTLHLLFLHETGSNNPCGIPSNPDKIPFHPYYTIKDILGLTLLLLTLMVLVLFLPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLMSILILAIIPMLHKSKQQSMMFRPFSQFLLWLLITILLTLTWIGSQPVNQPFIMIGQVASMMYFTTILVLMPLVSLTENNLL---K---------MF--------TVNLLLITLPIIAAMAFLTLTERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPMKPSTSTTTLYIIAPVLAFSIALLLWVPLPMPNSLINLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLTIIMLSVLLMSGSFNLHALITTQEYIWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTMIFLGTLYPTHSPELFTVCFVTKTLLLTSMFLWIRATYPRFRYDQLMHLLWKNFLPLTLALLMWYISTPIVISGI-P-PQN--MNP-LAQLVIYSTMIMGTLITSLSSHWFLAWAGLEMNMLAFTSILIKKANPR-STEAATKYFLMQSTASMILMMAITLNNLFPGQW--IMMNNPNQLMSLIMMMALAMKLGMTPFHFWLPEVTQGTPLIPGLLLLTWQKLAPIMIMYQIYPSINTNILMTL-STLSIMAGSWGGLNQTQLRKILAYSSITHMGWMMMTLVYNPNITVFYLLVYIIMTSTAFMTLNLSSNTTTLML---SRAWNKLTWLMPLMSITLLSMGGLPPLTGFLPKWITIQELTKNNNFIMPSVMVIMTLLNLYFYLRLIYTTSMTLLPTSNNTKMKW-QFENTKPMPLM-------PPLIILTTLLLPMSPTILTMF---MN-LVLALTINTLLTLLLMIIMFWLPQLNPYAEKINPYECGFDPLNSARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTSLPMMFKSSIMLIVILTLSLAYEWTQKG--LEWIE-MPIIYMNIMLAFITSLLGMLIYRSHLMSSLLCLEGMMLSLFIMNTLMALNMHFPLANIMPIALLVFAACEAAVGLALLISISNTYGLDYIHNLNLLQCMLKMVFPTIMLLPTTWFSKNNLIWINLTTHSLIISLIPI-LFFHQTNNNLISYS-TYLSSDPLTTPLLMLTAWLLPLMIMASQYHLHNESPLRKKLYLSMMISLQISLIMTFMATELILFYILFETTLIPTLIIITRWGNQAERLNASTYFLFYTLTGSLPLLIMLLFVHNNLGSLNIPLLTLTAQKLT-TTW-----SHNLTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIMASLIQTPWSFTGAIVLMIAHGLTSSMLFCLANSNYERTHSRIMLLSRGLQTLLPLMAFWWFAANLTNLALPPTINLIGELLVMMTSFSWSHVTIMLTGLNMLITALYSLYMLVTTQRGTLTSHIINMKPSFTRENMLMFMHMSPIILLSLNPSIIMGFTT------MMMHTSI-VMLALTSLIFPIIIT---LIKPNKN-YMYPNYVKTI-MMTTFIISLFPMTLYVLLDQDTIISNWHWMTIQSLEIMLSFKLDYFSMMFTPIALFITWCIMEFSMWYMSSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAAIQAILYNRIGDIGFILAMTWFFLHYNSWDFQQMFILDSS-PNLLPLMGILLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPMMENNMLIQSLTLCLGAVTTMFMAICALTQNDIKKIVAFSTSSQLG--FMMVTIGINQPYLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLTIGSLALAGMPFLTGFYSKDLIIETANTSYTNAWALSITLIATS-LTSAYSTRTIILTLTGQPRFSTSTYINENNPALLNPMKRLTVGSLLAGFLIVNNISPTTLPQLTMPYYLKLLALSVTTLGFLMALDLTLMTNNLK--MNIPSHVFKFSNMLGYFPTTIHRMIPCQNLIMSQNLAFILLDSIWLEKSMPKTISHTHITTSI--ITTTQKGMIKLYFLS---FLIPL--TLIPFLMA----------------- +>Rhinopithecus_roxellana_golden_snub-nosed_monkey +----MNENLFTPFMVPT-FLGLPAVVPIILFPTLLFPTSK-HLITNRLIIIQRNLVQLIMKQMMTIHSTKGQTWSLMLMSLIIFIAATNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVITGLRFKTKNSLAHFLPQGTPTPLIPMLVVIETISLFIQPVALAVRLTANITAGHLLMHLIGSATLALLT-ASFLATSLTLVLLVLLTILEMAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFITIMAML-PTLYLIMQLKLLSTNYHF-SPPQKEIYSMQAF-NSP-W-QLKWTKIYLP-HS---------MLINRWLFSTNHKDIGTLYLLFGAWAGTMGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNFSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQVCAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSMGSFISLVAMLLMVYMIWEAFASKRKVLLIEQPTSNLEWLHGSPPPYHTFDEPTFIKV-K--------MPHPVQLGLQDATSPIMEELIAFHDHAFMIVSLISFLVLYVLSSVLTTKLTNTNITDAQEMETIWTILPAIILILIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIDAPVRMMITSQDVLHSWTIPSLGLKTDAIPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGALSALLMTSGLIMWFHFYSSTLLVLGLLTNMLTMYQWWRDIVRESTYQGHHTTPVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPYLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKQMIQALSITILLGAYFTLLQISEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTVCLVRQLLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTPMRKSNLIMKMINHSLIDLPTPSNISAWWNFGSLLATCLMLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWTIRYLHANGASMFFICLFLHVGRGLYYGSFLLVETWNIGIALLFMIMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNIVQWVWGGYAIDNPTLTRFFTLHFTLPFIIAAFTTLHLLFLHETGSNNPCGIPSNPDKIPFHPYYTIKDILGLTFLLLTLMVLVLFLPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLMSILILAIIPALHKSKQQSMMFRPFSQFLLWLLVTILLTLTWIGSQPVNQPFIMIGQMMSMMYFTTILILMPLASLTENNLL---K---------MF--------TVNLLLITLPIIAAMAFLTLTERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTTLYIIAPVLAFSIALLLWMPLPMPNPLINLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIIMLSVLLMSGSFSLHALITTQEYTWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTAMIFLGTLYPIHSPELFTTCFVTKTLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLALLMWHISTPIMISGI-P-PQN--MNP-LAQLVIYSTMIMGTLITSLSSHWFLAWAGLEMNMLAFTSILIKKANPR-STEAATKYFLMQSTASMILMMAITLNNLFPGQW--IMMNNPNQLTSLIMMVALVMKLGMTPFHFWIPEVTQGTPLIPGLLLLTWQKLAPILIMYQIYPSINTNILMTL-STLSIMAGSWGGLNQTQLRKILAYSSITHMGWMMMTLVYNPNITAFYLLIYIIMTSTMFMALNLSSNTTTLML---SRAWNKLTWLMPLMSVTLLSMGGLPPLTGFLPKWITIQELTKNNNFIMPSVMIIMTLLNLYFYLRLIYITSMTLLPTSNNTKMKW-QFENTKPTPLM-------SPLIVLTTLLLPMSPTILTMF---MN-LVLALTINTLLTLLLMTIMFWLPQLNPYAEKINPYECGFDPLNSARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPMMLKSSIMLIIILTLSLAYEWTQKG--LEWNE-MPIIYMNITLAFIISLLGMLIYRSHLMSSLLCLEGMMLSLFIMNTLMALNMHFPLANIMPIALLVFAACEAAVGLALLISISNTYGLDHIHNLNLLQCMLKMVFPMMMLLPMTWLSKNNLIWINLTTHSLIISLIPI-LFFHQTNNNLISYS-TYLSSDPLTTPLLTLTAWLLPLMIMASQYHLHNESPLRKKLYLSMMISLQISLIMTFMATELILFYILFETTLIPTLIIITRWGNQAERLNASTYFLFYTLAGSLPLLIMLLFVHNNLGSLNIPLLTLTAQKLT-ATW-----SHNLTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTPILNP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIMASLIQTPWSFTGAIVLMIAHGLTSSMLFCLANSNYERTHSRIMLLSRGLQTLLPLMAFWWFAANLTNLALPPTINLIGELMVMMTSFSWSHVTIMFTGLNMLITALYSLYMLITTQRGTLTSHIINMKPSFTRENMLMFMHLSPIILLSLNPSIIMGFTT------MMMHTSI-VMLALTSLIFPIIIT---LIKPNKN-YMYPNYVKTI-MMITFIISLLPMTMYVLLDQDTIISNWHWMTIQSLEIMLSFKLDYFSMMFTPIALFITWCIMEFSMWYMSSDPNINQFFKYLLIFLITMLILITANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAAIQAILYNRIGDIGFILAMTWFLLHYNSWDFQQMFILDSS-PSLLPLMGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPMMENNMLVQSLTLCLGAVTTMFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKMMPLTSTSLTIGSLALAGMPFLTGFYSKDLIIETANTSYTNAWALSITLIATS-LTSAYSTRTIILTLTGQPRFSTSTYINENNPALLNPMKRLTMGSLLAGFIIVSNISPTTLPQLTMPCYLKLLALSVATLGFLMALDLTLMTNNLK--MNTPSHMFKFSNMLGYFPTTIHRMIPSQNLIMSQNLAFILLDSIWLEKSMPKTISHTHIITSI--TTTTQKGMIKLYFLS---FLIPL--TLIPFLMA----------------- +>Papio_kindae_Kinda_baboon +----MNENLFTSFSAPT-ILGQPAAIPIIMFPTLLIPTSK-HLINNRLTTIQQNLIKLILKQMMAPHNAKGQSWSLMLMSLITFITMTNLLGLLPHSFTPTTQLSMNLAMAIPLWTGTIITGLRFKTKSSLAHMLPQGTPTPLIPMLVVIETISLLIQPMALAVRLTANITAGHLLMHLIGNTMLTLST-INLSTTLLTSVLLTLLTVLEIAVALIQAYVFTLLVNLYLHNNTMPQLDTSTWFTIITAML-PTLYLITQLKLLSMNYYQ-PPLTK-NPNMQAH-NTC-W-RPKWTKTYLP-HS-QPQQS---MLINRWLFSTNHKDIGTLYLLFGAWAGVTGMALSLLIRAELGQPGSLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTVVEAGAGTGWTVYPPLSGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTMGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLNQTCAKAHFIITFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSFISLTATILMIYMIWEAFASKRKVLLTEHPSTSLEWLNGCPPPHHTFEEPAYIKL-SEKGGSRTPMAHPVQLGLQDATSPVMEELITFHDQALMAMFLISFLILYALSSTLTTKLTNTNITDAQEMETIWTILPAIILILIALPSLRILYMTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQLHAYHMVKPSPWPLTGALSAFLLTSGLIMWFHFYSTALLTLGLLTNALTMYQWWRDIIRESTFQGHHTMPVQKSLRYGMALFIISEVFFFAGFFWAFYHSSLAPTPRLGCHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMNSSRKQTIQALLITILLGTYFTLLQISEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLLICLIRQLFYHFTPSHHFGFEAAAWYWHFVDVIWLFLYISIYWWGS--MTSMRKSNPIMKMINRSFIDLPTPSNISIWWNFGSLLATCLILQIVTGLFLAMHYSPDTSSAFSSIAHITRDVNYGWTIRYLHANGASMLFICLFLHVGRSLYYGSYLLLKTWNIGITLLLMTMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTNLVQWVWGGPAIDNPTLMRFFTLHFILPFGIVALTAVHLLFLHETGSNNPCGISSDPDKITFHPYYTTKDILGMALLLLALMTLTLLSPNLLNDPDNYTPADPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALFLSILILAITPVLHKSKQQSMMFRPLSQFLFWLLVTTLLTLTWIGSQPVTQPLTIIGQVASMMYFLTILILMPLAAQIENSLL---KWT-------MT--------TMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPLTSSTTLYITAPALAFSIALLLWTPLPMPNPLINFNLGLLFILATSSLTVYSILWSGWASNSNYALIGALRAVAQMISYEVTLSIILLSILLTSGSFNLNMLITTQEHLWLILPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYSAGPFALFFMAEYMNIIMMNALTTTIFLGTFYPTHSPELFTTCFTIKTLLLTSLFLWIRATYPRFRYDQLMHLLWKSFLPLTLALLMWSTSMPIAISSI-P-PQT--MNP-LAQLIIYTTVITGTLITMLSSHWFLAWAGLEMNMLAFIPTLIKKTNAR-STEAATKYFLAQSTASMILMMAIISNNLLSGHW-TTTS-CTNQLPPLAMTIALTMKLGMTPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISVMYQIHPSINTHILLIL-STLSIAVGSWGGLNQTQLRKILGYSSITHTGWMMMTLTYNPTITTLYLVTYIILTTTMFLTLNLNSSTTTLML---SNTWNKSTHLVPLMTSTLLSLGGLPPLTGFLPKWITIQELTMNNNFITPTIMIALTLLNLYFYMRLIYTISLTLLPTSNNTKMMW-HFENTKPMLLI-------PALTTISTLLLPISPLILSIP---MN-LMLALMINTLLTSLLTIIMFWLPQLNSYAEKANPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWALQTTNLSTMIKTSIMFIIILTLSLAYEWTQKG--LDWTE-MTPIHMNITLAFTISLLGMLIYRSHLMASLLCLEGMMMSLFIMTAIMASNAHSPLINIMPIIMLVFAACEAAVGLALLISISNTYGLDHINNLNLLQCMLKMVIPTTMLLPMTWLSKGNTIWINLTAHSLTISLIPL-LFFNQTDNNLLSYS-THLSSDPLTTPLLTLTAWLLPLMIMASQYHLYNEPSSQKKLYLSMMIFLQITLILTFMATELIMFYILFETTLIPTLIIITKWGNQAERLNAGSYLLFYTLTGSLPLLIMLIYTYNKTGSLNTTLLTLTDQKLT-TTW-----SHNLTWLACMMAFMTKLPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEYMAYPFLMLSLWGMIMTS--LTCLRQTDLKSLIAYSSVSHMALVIVASLIQTPWSFSGATILMIAHGLTSSMCFCLANSNYERTHSRIMLLSRGLQILLPLMTFWWFMASLTNLALPPTINLIGELFVIAASFSWSKVTMILTGLNMLITALYSLHMFTTMQRGTLTHHTINMKPPFTRENTLMFLHLAPTILLSLNPNTILGLTP------MTMCTSI-MLTTLTSLALPIFAT---LVNPNKT-HLYPNYVKTT-MMYAFITSLIPTTLYIFSNQETTIWSWHWMVTQTLDLTLSFKLDYFSMMFIPIALLITWSVMEFSLWYMSSDPNINQFFKYLLIFLITMLILITANNLFQLFIGWEGVGIMSFLLISWWHARTDANTAAIQAVLYNRIGDVGLILAMVWFLLHYNSWDFQQMLALNPR-PNLLPLMGLLLAAVGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNTSIQNLTLCLGAITTLFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHTCTHAFFKAMLFICSGSIIHSLNNEQDIRKMGGLFKTMPLTSTSLIVGNLALTGMPFLTGFYSKDLIIEATSTSYTNAWALSITLIATS-LTSAYSTRTILLTLTGQPRFPTLTNINENNPALLNPIKRLTTASMIAGFLITNNIPPTSLPQPTTPLYLKLLALCMTALGFITALDLTLMTNKLK--VKTPPQTSKFSNMLGYFPTIAHRTIPHQSLLMSQNLALLLLDSMWLEKSMPKMISQTHTTAST--TVTAQKGMIKLYSLS---FLIPL--TLTLLLMV----------------- +>Pteropus_alecto_black_flying_fox +----MNENLFSSFITPT-MMGLPIVTLIIMFPTMLFPSTN-RLVNNRLVAIQQWVIHLTSKQMMAIHNQTGQKWSLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVALGFRHKTKASLAHFLPQGTPIPLIPMLIVIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTMTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-LTLYIIMQLKISKHLYYQ-NPEPT-VTKSTKH-STP-W-EDKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMVFMIWEAFASKREVSTVELTTTNLEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLHFHDHALMIVFLISSLVLYLISVMLTTSLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPYLTVKTMGHQWYWSYEYTDYEDLTFDSYMVPTQDLKPGELRLLEVDNRVVLPMELTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLAMWFHFNTPSILLLGLLTNMLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFIGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKPMLHALLTTILLGGYFTLLQASEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLFVCFVRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLFKIINDSLIDLPAPSSISSWWNFGSLLGICLAIQILTGLFLAMHYTSDTTTAFQSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGLYYGSYIYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALVLVHLLFLHETGSNNPTGIPSDSDMIPFHPYYTIKDMLGALAMVLALLMLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPLSQCMFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLLILVLMPITSIVENHLL---KW--------MF--------MVNLLTMIVPILLAVAFLTLIERKVLGYMQLRKGPNVVGPYGLLQPMADALKLFIKEPLRPLTSSPSMFIIAPILALTLALTMWIPLPMPHPLINMNLAVLFMLAMSSLAVYSILWSGWASNSKYALIGAMRAVAQTISYEVTLAIILLSVLLLSGSFSLSTLIITQEHTWLMLSSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFMAEYANIIMMNTLTAILFMGAFHDPTMPELYTLNLIIKTLLLTVFFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVAMPITMAGI-P-PQT--MNP-LIFTMIMSTVMLGTAIVATSSHWLMAWIGFEMNMLTIIPILMKKYNPR-SMEASTKYFLTQATASMLLMLAVTMNLVYSGQW--SITKPLNPMASTIMTLAMAMKLGLSPFHFWVPEVTQGISLPSGLILLTWQKLAPMSILYQISSTINLDLLMML-SILSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILTYNPTMTLLNLVIYILLTTTTFMMFMLNSTTTTLSL---SHTWNKTPLLTTAILLTMLSLGGLPPLSGFMPKWMIIQELTKNDSVIMPTAMAVMALLNLYFYMRLTYSTSLTMFPSTNSMKMKW-QFNYTKPTTYL-------SPLIILSTLILPLSPMLALLE---MN-LMITLLTNTLLASLLVLIAFWMPQMNSYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAVQTSNLTIMLTMSLTLISLLAVSLAYEWFNKG--LEWAE-MALTYMNMALAFTVSLLGLLMYRSHLMSSLLCLEGMMLSLFVTMALTILNSNLVLASMIPIILLVFAACEAALGLSLLVMVSNTYGVDYVQNLNLLQCMLKIIMPTIMLIPLTWLSKNNMIWINTTAHSLIITLLSL-PLLNQFNDNSLNLS-LMYFSDSLSTPLLMLTMWLLPLMIIASQFHLTKETYTRKKLYITMLISLQIFLIMTFTATELIFFYILFEATLVPTLIIITRWGAQTERLNAGLYFLFYTLVGSLPLLVALIYMQNITGSLNILLTQYWSEPLA-NSW-----GNSFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTVLNP-TTNFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMVAHGLTSSMLFCLANSNYERTHSRTMILARGLQTVLPLMAAWWLLASLTNLALPPSINLIGELFVVMSTFSWSSISIILMGINIVITALYSLYMLIMTQRGKQTYHVNNIPPSYTRENTLMAMHLLPLLLLSINPKIILGTLY------MNLFTSS-MLLSVLILMAPIVSS---NSNFYSN-KLYPNYVKTM-VSYSFLVSLIPMMIFIQSGQETMLSNWHWMSIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLVTMVILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFLVAMAWFLSNLNTWELQQIFALNPT-NTNLPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKTIQTAMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTVGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKTMPFTTTALITGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALTLTLIATS-LTAVYSTRIIYFALLGQPRFPTLILINENNPLLINPIKRLLMGSIFAGFIISNNITPTTIPQMTMPTYLKMTALFVTLLGFTVALELNMATQNLK--L----NSLKFSNLLGYFPTIMH-FKPFMNLFMSQKVASMLLDMIWLENVLPKSISLFQAKTST--LISSQKGQIKLYFLS---FLITL--ALSLIVT----------NYI----- +>Rousettus_aegyptiacus_Egyptian_rousette +----MNENLFASFITPT-MMGLPVVTLIIMFPTILFPSSN-RLINNRLIAIQQWILHLTAKQMMSIHNHTGQKWSLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVALGFRHKTKASLAHFLPQGTPVPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALLN-INMLTSFITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIVSML-LTLYIIMQLKVSKNVYHQ-NPEPT-ITKSTKH-PTP-W-EDKWTKIYSP-LS-LPLR----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNSTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMVFMIWEAFASKREVSTVELSTLNLEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLHFHDHALMIVFLISSLVLYLISVMLTTSLTHTSTMDAQEVETIWTILPAMILIMIALPSLRILYMMDEINNPYLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTQDLKPGELRLLEVDNRVVLPMELTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSTLLLMLGLSANMLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFILSEVFFFIGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKSMLQALLITILLGAYFTLLQASEYYETPFTIADGVYGSTFFMATGFHGLHVIIGSTFLLVCFIRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLFKIINDSLVDLPTPSSISSWWNFGSLLGICLSIQILTGLFLAMHYTSDTATAFQSVTHICRDVNYGWVLRYLHANGASMFFICLFLHVGRGLYYGSYIFTETWNVGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDMDMIPFHPYHTIKDALGTLIMLLVLLTLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALMPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFSLILILMPLISIIENHLL---KW--------MF--------IINLLALIIPILLAVAFLTLIERKVLGYMQLRKGPNVVGPYGLLQPAADAVKLFTKEPLRPLTSSPSMFIIAPILALTLALTMWIPLPMPHPLINMNLAVLFMLALSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLLSGSFSLSTLIITQEYTWLILSSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFMAEYANIIMMNILTATLFMGAYHNPLMPELHSINLTIKVLLLTVLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVAMPITMASI-P-PQT--MNP-LIFTMIMLTVMLGTMIVMTSSHWLMVWIGFEMNMLAIIPILMKKYNPR-SMEASTKYFLTQATASMLLMLALLSNLVYSGQW--SITKPLDPTTSIIMTLALAMKLGLSPFHFWVPEVAQGIKLSSGLILLTWQKLAPMSILYQLSPTLNTNLLLTM-SMMSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMTYNPTMALLNLAIYILLTTTTFVMFMLNSTTTTLSL---SHTWNKTPLLTTAILTTMLSLGGLPPLSGFLPKWMIIQELTKNDSIIMPTTMAITALLNLYFYMRLTYSTSLTMFPSTNNMKIKW-QFGHLNPTTLL-------APLIILSTLILPLSPILALLE---MN-LMLTLFINTLLASLLVLIAFWMPQMNSYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDNLKIMLIMSLTLISLLAISLAYEWSHKG--LEWAE-MTLVYMNMALAFTISLLGLLMYRSHLMSSLLCLEGMMLSLFVTMAVTILNSHLILANMIPIILLVFAACEAALGLSLLVMVSNTYGVDHVQNLNLLQCMLKIIIPTTMLIPLVWLSKNSMIWINTTAYSLMITLIGL-PLLNQFNDNSLNMS-LTYFSDSLSTPLLMLTMWLLPLMIIASQFHLIKESYTRKKLYITMLILLQIFLIMTFSATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPLLVALIYLQNILGSLNILLIQHWSSPLT-NSW-----SNSLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTLLNP-TTNFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTVLPLMAAWWLLASLTNLALPPSINLIGELFVVMSTFSWSPLSIGLMGINIIITALYSLYMLIMTQRGKQTHHISNLTPSYTRENTLMAMHILPLLLLSINPKIILGTLY------MNLFTSS-TLLSLLILTMPIMAS---NFNSYAK-KSYPNYVKTM-VSYSFLVSLIPTMMFIQSGQEMMISNWHWMTIQTLKLNLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFLMAMAWFLFNLNTWELQQIFTLNPT-NTNLPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKTIQTMMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTVGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKSLPFTTTALITGSLALTGMPFLTGFYSKDLIIESINTSYTNAWALTITLIATS-LTAVYSTRIIYFALLGQPRFPALILINENNPLLINPIKRLLIGSIFAGFFISNNITPTTIPQMTMPTYLKITAMLITLLGFIVALELNMATQNLK--LTPPSKYLKFSNLLGYFPTVMHRLQPLINLLASQKVASMLLDLTWLENALPKSISSFQMKTST--LISSQKGQIKLYFLS---FLITL--TLSLITL----------NIN----- +>Metachirus_nudicaudatus_brown_four-eyed_opossum +----MNENLFAPFITPT-IMGITTLPIIIMFPCLILSSPK-RWLPNRIQILQMWLIRLITKQMMTMHNKQGRAWTLMLMSLILFIASTNLLGLLPYSFTPTTQLSMNIGMAIPLWAGTVIMGFRNKPKMSLAHFLPQGTPTPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALSS-ISMTVSTITFSILFLLTLLEIAVAMIQAYVFTLLVSLYLHDNSMPQLDTSTWTLTILLMI-ISLFCIYQLKMMNQALIQITPMTEQSKS-TKY-TMP-W-EKKWTKIYLP-HS-SHPQL---MFINRWLFSTNHKDIGTLYLLFGAWAGMTGTALSILIRAELGQPGTLIGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTIEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYMLNDMWAKIQFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNVVSSIGSFISLTAVILMVFIIWEAFASKREVLDVELTTTNIEWLYGCPPPYHTFEQPVFIKA----------MPYPMQLGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEIYNPYLTVKAMGHQWYWSYEYTDYENLMFDSYMIPTKDLSPGQLRLLEVDNRIVLPMELPIRMLVSSEDVLHAWTMPSLGLKADAIPGRLNQITLTSSRPGVFYGQCSEICGSNHSFMPIVLEMASLKYFEKWSSMMQ----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHYNSSTLMFMGLMTMLLTMYQWWRDIVREGTFQGHHTPVVQKGLRYGMILFILSEVFFFIGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQMIQALLITISLGLYFTILQAMEYYEASFTISDGVYGSTFFVATGFHGLHVIIGSTFLFVCLLRQLFYHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINDSFIDLPTPSNISAWWNFGSLLGMCLIIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNIHANGASMFFMCLFLHVGRGIYYGSYLYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVEWIWGGFSVDKATLTRFFAFHFILPFIILAMVVVHLLFLHETGSNNPTGLDPNSDKIPFHPYYTIKDILGLFLMIIILLSLAMFSPDLLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLIMPLLHTSTQRSMMFRPISQTLFWMLTANLIILTWIGGQPVEQPYISIGQWASISYFTIIIILMPLAGTLENYMLK-PKFP-------MF--------LINLLMYIIPILLAVAFLTLVERKVLGYMQFRKGPNVIGPYGILQPFADALKLFTKEPLRPLTSSISMFTIAPTLALTLALTIWTPLPMPNTLLDLNLGLLFILALSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKNMLITQENMWLIMMTWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIMVMNAITATLFLGSPLSSNIPYINSTTFMIKMLILTMAFLWIRASYPRFRYDQLMYLLWKNFLPITLALCLWYISIPISLSSL-P-PQL--MSP-YVLTIMSLSLLLGTTMTLISDHWLTAWMGLEINTLAVIPLMTKPHHSR-STESAIKYFMIQATASMIILFSAIFNASTTNQW--ITGQISNTSASFMMTIALAMKLGLAPFHFWVPEVTQGIPLLSGMILLTWQKIAPISIFYQISPSLNMSLLMIL-SITSTLLGGWGGLNQTQLRKILAYSSIAHMGWMTIIIMIYPSLTILNLILYLASTITMFMVLNQSSSTKINSL---SILWNKSAPNMIIITLTLLSLGGLPPLTGFMPKWLILQELINFNNIPLAMMLALSTLLNLFFYMRIIYSSTLTMFPSINNTKLQW-ALYSHKTILPI-------PTLTIISSLLLPMTPMFITLS--MIN-LIITLITNSLLATIIIMIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAVQLPSPFVTLILSYCLIMLLTAGLAYEWIQKG--LEWTE-MVLIKLNIIMAFMLALTGVLIYRSHLMSTLLCLEGMMLSLFIFMAAVITHFHMFSISMMPLILLVFSACEAGVGLALLVTISNTYGNDQVQNLNLLQWMVKILLPTLMLIPLTWLSKKKWLWINTTTYSLLISITSL-PMLYHPMDLGYNFN-NSFSLDSLSSPLLVLSCWLLPLMIMASQNHLNKESLLRKKLYLTMMIILQSSLIIAFSSSELIMFYILFETTLIPTLIIITRWGNQNERLNAGIYFLFYTLVGSLPLLVALLTMNKNLGSLHILMNSLLINQLN-NTL-----SSSMLWYACMTAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITSLTEP-MTIHLFYPFIILSMWGMIMTS--SICMRQTDLKSLIAYSSVSHMALVIIAALIQSTTSFMGATTLMVAHGLTSSMLFCLANTNYERIHSRTMILARGLQLILPLMNTWWLTASLANLALPPTINLLGELMIITASFSWSNFSILLLGLNTVITALYSLYMLITSQRGKFTHHMTSLYPSLTREHMLMTLHILPLVLLSLNPKYILGMTY------MNIS-NTTSIMSIILLILPLLYN---LLFPKKI-N-FPLYCKNM-IMLAFMTSLPSLLLFMYKGQESIITNWHWFSIHSFNISMSFKMDFFSIIFIPIALFVTWAILEFSLWYMHSDPNISQFFKYLTIFLLTMIILVSANNLFQLFIGWEGVGIMSFLLIGWWYGRSDANTAALQAILYNRIGDIGFMLTMAWLMLNCNSWDLQHIFSMNMH---PIALLGLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMLENNQMMLTITLCLGALTTLFTAMCAIMQNDIKKIVAFSTSSQLG--LMMVTVGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLLYTLPITSSALMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALTITLIATS-LTAIYSLRIIYYALLGYPRFMTMSPLNENNPNLINPIIRLALGTIFAGFLLTTTIPPSSSIIMTMPSFMKQMALMVTTMGLMVGMELNSLTNNL---MKSNNHTNNFLTMLGFYTQIMHRIQPLISLFMGQRIATMLIDLNWYEKAGPKGQANIHSKLSS-LISASQKGLMKMYFLS---FLVSI--IFIILFT------------------ +>Trichosurus_vulpecula_common_brushtail +----MNENLFATFITPT-IMGITTLPIIMLFPCLILTTPK-RWLPNRIQTLQIWLIRLITKQMMTMHNKQGRTWTLMLMSLILFIASTNLLGLLPYSFTPTTQLSMNIGMAIPLWLGTVIMGFRNKPKTSLAHFLPQGTPTPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALSS-INMTVSTITFTILFLLTILELAVAMIQAYVFTLLVSLYLHDNSMPQLDTSTWFLTISLMI-ISLFCVYQTKMINQTMISITQQNKKDIT-SQT-QLH-W-EKKWTKIYLP-HS-SPLLS---MFITRWLFSTNHKDIGTLYLIFGAWAGMTGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSAVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPALSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYMLNDLWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNVISSIGSFISLTAVILMVFTIWEAFASKREVASVELTTTNLEWLYGCPPPYHTFEQPVFVKS-QL-------MPYPMQLGFQDATSPIMEELTYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETIWTIMPAAILVLIALPSLRILYMMDEIYNPYLTVKAMGHQWYWSYEYTDYEDLMFDSYMVPTQDLAPGQFRLLEVDNRMVLPMELPIRMLISSEDVLHAWTVPSLGLKADAIPGRLNQATLTSTRPGVFYGQCSEICGSNHSFMPIVLEMTTLKYFEKWSSMMQSFL-------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSSLLALIGLTCMLLTMYQWWRDIIREGTFQGHHTPAVQKGLRYGMVLFIISEVFFFLGFFWAFYHSSLAPTHELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQMIQALSITIALGLYFTILQAMEYYESSFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCLLRQFNYHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MFNLRKTHPIMKIINHSFIDLPAPSNISAWWNFGSLLGICLTMQILTGLFLAMHYTADTATAFSSVAHICRDVNYGWLIRNLHANGASMFFMCLFLHIGRGIYYGSYLYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVLVHLLFLHETGSNNPSGINPDSDKIPFHPYYTIKDALGLMLMLLTLLLLTLFSPDMLSDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLAMPLLHTSNQRSMMFRPISQTLFWILTANLLILTWIGGQPVEEPYIIIGQVASISYFLLIIVLMPMAGLFENFMLK-PKW--------MF--------IINLLLYIIPILLAVAFLTLVERKALGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSISMFIIAPILALTLAFTIWTPLPMPHSLIDLNLGLLFILALSGLSVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAIILLSIMLINGSFTLKNLIITQENMWLIMTTWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIMAMNAMTTILFLGSSINHNFTHLNTLSFVIKTALLTFMFLWVRASYPRFRYDQLMYLLWKNFLPLTLAFCLWFISIPVALSCI-P-PQI--MSP-YVLLIISISLLLGTSLTLLSNHWLVAWMGLEINTLAIIPMMTYPNHPR-ATESAIKYFLTQSTASMMLMFAIINNAWMTNQW--TLSQISDQTSSITMTLALAIKLGLAPFHFWVPEVTQGIPLTSGMLLLTWQKIAPMSLMYQISPSLNMKILTIL-AFSSTLLGGWGGLNQTHLRKILAYSSIAHMGWMTIIILINPTLMLLNLIIYIAATLTLFLALNHSSITKIKSL---ANLWNKSTPMTIVILLTLLSLGGLPPLTGFMPKWLILQELVKHNNIPMAMLMALSALLNLFFYMRIIYVSTLTMPPSTNNSKLQW-PYQQTKTINII-------PSLTIISSLLLPLTPMFITLS---MN-LIITLIINTTLSTIIVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQLSEPNTMLILAYCLILLLTAGLAYEWLQKG--LEWAE-MTSINLNLTVAFSLALAGVLIYRSHLMSTLLCLEGMMLSLFVMMALLISHFHMFSTSMAPIILLVFSACEAGVGLALLVKTSNNYGNDYVQNLNLLQCMLKILIPTFMLIPLTWLSKKPWIWLNSTSHSLTISVISL-TLLYYNTDLSHNYN-SSFFTDSLSSPLVVLSCWLLPLMMIASQNHLTKESTNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLPLLVALLYLHNNIGSLHMLTISMMSTSMY-PSL-----SNSILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQP-ITSHLYYPFIILSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTINLLGELMVIVSSFSWSNFSIILLGLNTAITALYSLHMLITSQRGKFTHHLHPIKPSFTREHILMTLHLIPLLIISANPKFILGITY---MKVINFMLNTTILLSITMLTFPLIYN---LIFPNKT-NQFPLYCKNA-VKTAFFISLPSLLMFMNMGHESTITNWQWFSMGSFNISMSFKLDYFSIIFIPIALYVTWSILEFSLWYMHSDPYIHQFFKYLITFLFTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWYGRTDANTAALQAVLYNRIGDIGFMLSMAWLMTNNNSWDLQHIFMTNMD---TLALLGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMLENNTTILTIALCLGAMTTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLLTLLPITSSALITGSLALMGTPFLAGFYSKDSIIEAMNTSYTNTWALTLTLIATM-LTAMYSMRIIFFALLNQPRFLPLSPINENNPNLTNPIMRLAMGSIFAGFTLTTNIPPTSIITMTMPPTTKMSALMVTILGLLIAMELNSSTNKLP--TMPFIHTHNFSNMLGYFTFLFHRLYPLANLQLGQHIATMLIDLNWYEKTGPKGQANLHSNLSS-SITSTHKGLIKTYFLS---FIISI--TMIMLII------------------ +>Pseudocheirus_peregrinus_common_ring-tailed_possum +----MNENLFAPFITPT-IMGITTLPIIMLFPCLILSTPK-RWLPNRIQTLQIWLIRLITKQMMTMHNKQGRSWTLMLISLILFIASTNLLGLLPYSFTPTTQLSMNIGMAIPLWMGTVVMGFRNKPKASLAHFLPQGTPTPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALSS-ISMAVSSITFMILFLLTILELAVAMIQAYVFTLLVSLYLHDNSMPQLDTSTWFMTIILMI-MALFCIYQLKMLNQTMVSIMQQDEKEHH-TKA-QLP-W-EKKWTKIYLP-HS-SPLQS---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNMAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPALSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDLWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNILSSIGSFISLTAVILMMFIIWEAFAAKREVSTVELTTTNIEWLYGCPPPYHTFEQPVFVKL----------MPYPMQLGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETIWTILPAVILVLIALPSLRILYMMDEIYNPYLTVKAMGHQWYWSYEYTDYEDLTFDSYMIPTSDLNPGQLRLLEVDNRVVLPMELPIRMLISSEDVLHAWAVPSLGLKTDAIPGRLNQATLTSTRPGIYYGQCSEICGSNHSFMPIVLEMTSLKYFEKWSSMMQ----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSTVLLTIGLTCTLLTMYQWWRDIVREGTFQGHHTPVVQKGLRYGMVLFIISEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQMIQALTITIMLGLYFTILQAMEYYESSFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCLLRQFNYHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKTHPLMKILNHSFIDLPAPSNITAWWNFGSLLGVCLVIQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWLIRNLHANGASMFFMCLFLHVGRGIYYGSYLYKETWNIGVILLLVVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIVALVIVHLLFLHETGSNNPSGINPDSDKIPFHPYYTIKDILGLMFMILTLLLLTLFSPDMLGDPDNFSPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLIIPLLHTSKQRSLMFRPISQTLFWLLTANLLTLTWIGGQPVEEPYIIIGQVASMTYFLLILILMPAAGLFENFMLK-PKW--------MV--------IMNLLLYIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPQTSSISMFIIAPILALTLALTIWTPLPMPHTLIDLNLGLLFILALSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKNLITTQENMWLIVPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIMAMNAMTAILFLGSCTNHNLNYLNTTSFMIKTLTLTFLFLWIRASYPRFRYDQLMYLLWKNFLPMTLALCLWFISIPIALSCI-P-PQI--MSP-YVFIIISISLFMGTSLTLLSNHWLLAWMGLEINTLAIIPMMTHPNHPR-STESAIKYFLTQATASMMIMFAIIYNAWTTNQW--TLFQMSDISASTLMTIALAMKLGLAPFHFWVPEVTQGIPLLSGMVLLTWQKVAPMSLLYQISPSLNMKILTTL-AITSTLLGGWGGLNQTHLRKILAYSSIAHVGWMTIIILINPTMTLVNLLIYIFSTLTLFLALNLSSTTKIKSI---SNLWTKSTPMTIIIFLTLLSLGGLPPLTGFMPKWLILQELVAHKNVLMATLMALSALLNLFFYMRIIYATTLTMYPTSNNSKFQW-LKPQTKTINII-------PSLTIISSLLLPITPIFIILN--MIN-LIITLLINSILSTIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWAIQLQTPKSMLILSYCLILLLTAGLAYEWVQKG--LEWTE-MMSINLNLIMAFSLALAGVLIYRTHLMSTLLCLEGMMLSLFILMALLISHFHMFSVSMAPLVLLVFSACEAGVGLALLVKTSSDYGNDYVQNLNLLQWMVKILIPTFMLIPLTWLSKSPWVWTNPTSHSLLISIASL-TMLHHANDLGYNFN-SSFNMDSLSSPLVVLSCWLLPLMMIASQNHLSKESLNRKKTFLTTLIILQLSLIMAFTASELIMFYILFETTLIPTLVVITRWGNQNERLNAGLYFLFYTLVGSLPLLVALLYLHTNLGSLHMLMASITSPTLK-YSS-----SNTILWYACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITVFTDP-VTSNLLYPFVILSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMGLVIIAALMQSTLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQVLLPLMCTWWLLASLTNLALPPSINLLGELMVIVASFSWSNFSIILLGINTVITAIYSLHMLITSQRGKFTHHLHPITPSFTREHILMTLHLIPLLIISTNPKFMLGLTY------MNNLLNSMLLLSIVLLTLPIMHN---LIMPNKT-AQFPIYCKDS-VKMAFFISLPALMLFINSGQESSITNWQWFSIGPLNISMSFKLDYFSIIFIPIALYVTWSILEFSLWYMHTDPYIHRFFKYLMTFLLTMIILVSANNLLQLFIGWEGVGIMSFMLIGWWYGRTDANTAALQAILYNRIGDIGFFLTLAWLMINNNSWDLQHIFTTKMS---TLALLGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMMQNNTTALTAALCLGAITTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLTILPITSSAIITGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALTTTMIATI-LTAMYSLRIIYFALLNEPRFSTTSPINENNPNLINPIMRLALGSIFAGFILIMNIPPTTMITMTMPPMTKLSALIVTTIGILLAMELNAMTNKSP--STKTIHTHHFSNMLGYFTHLFHRMSPLANLQMGQHIATMLIDLNWYEKTGPKGQANLHSSTSM-SITSSQKGLIKVYFLS---FIISI--PMITMMN------------------ +>Marmota_himalayana_Himalayan_marmot +----MNENLFASFITPT-LVGFPIVLFIIMFPNLLFPSPT-RLVNNRLVSFQQWLIQLVLKQMMIMHNPKGRTWSLMLVSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAVPLWAGAVITGFRHKTKASLAHFLPQGTPILLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLMLTS-ISPPTAILTFIILVLLTMLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-LALFFMFQLKISNHYYMS-SPSPK-DTKLIEH-KTP-W-EEKWTKIYLP-LS-LPLR----MFINRWFFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYLPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYSLNDMWAKIHFTVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTAWNTVSSMGSFISLTAVMIMIFMIWEAFASKREVLTVELMSTNLEWLHGCPPPYHTFEEPTYIKI----------MAYPLELGFQDATSPIMEELLHLHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINDPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLAPGGLRLLEVDNRVVLPMELPVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFENWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSSFILLLGLTANILTMYQWWRDIVREGTFQGHHTSIVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPELGSCWPPVGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMTQALSITIALGLYFTLLQASEYLETSFTISDSVYGSTFFMATGFHGLHVMIGSTFLLVCLIRQLNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNTRKTHPLIKMINHSFIDLPTPSNISTWWNFGSLLGLCLAIQIFTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYIHANGASMFFICLFLHVGRGVYYGSYTYFETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPSGLISDSDKIPFHPYYTIKDILGAILLISILMILVLLSPDLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILMLFPLLHLSKQRSMMFRPLSQCVFWILVADLITLTWIGGQPVEYPYTIIGQLASILYFTIILLILPIISLIENKLL---KW--------MF--------MINLLLLIIPILVAMAFLTLIERKMLGYMQLRKGPNVVGPYGLLQPFADAMKLFIKEPMKPLTSSIMLFIIAPTLALTLAFTMWIPLPMPQPLINMNMGVLFILATSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFSLSTLIITQQFTWLLLPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTVTLFMGALLNPTSPETFTLSFTLKTLMLTSIFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPITTACV-P-PQT--MNP-LTSTAIYLTLFSGTMITLFSSHWLLAWVGLEMNMLTITPILIHKGNPR-STEATCKYFLIQATASMILMMGTMINFMESGQW--TLSNSYNQISSFMLTIALSMKMGLAPFHLWVPEITQGIPLKSGLIVLTWQKIAPISIAYQIAPSMNSTLMLFM-GALSIMLGGWGGLNQTQLRKILAYSSVAHMGWMMAIITYSPTLTMFNLIIYIMLTINMFMLLLYYKKTTTLSL---SNLWNKFPLLTPTVLIVLMSLGGLPPLSGFMPKWVILKELILNNNIIFSTLMAMLALLNLYFYTRLIYSTSLTLFPSFNNTKMKW-QFENVKLTPLL-------PIFIIISTLSLPLMPMLSLLN---MN-LMVTLLVNSFIALLLISVAFWLPQLNVYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNLMLTMALLLILILTLGLAYEWIQKG--LEWIE-MPIITLNIMLAYFTSLLGMFIYRSHLMSSLLCLEGMMLSMFVLCSLLTTSFHFSLSFMIPITLLVFAACEAAVGLALLVMVSNTYGLDYVQNLNILQCMLKIIIPTILLAPLMWFSKPSMIWINPSIHSLIISLIVL-LTLNHSMNTDLIFS-LVFFTDPLSSPLLILTAWLLPLMIMASQSHLTQEPLIRKKLYILTLILLQFFLIMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIYIQKSTGSLNFIVSTYQSSVLP-MSW-----TNHILWLACTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMIRISTFLYP-VTSNMAYPFILLSLWGMIMTS--SVCLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMTLARGLQSILPLMATWWILATLTNLALPPSINLIGELFIIMASFTWSNTSIILTGLNMLITALYSLYMLITTQQGKLTYHTLNINPSFTRENTLMFLHLFPLIILSTNPTIILGQSY------MNMFSSL-ILTSLMILSFPIFLT---MTNYHKH-INFPNHVKIS-IVCALSFCIVPTLMFINSNYELIISNWHWMTIQTFTLSMSFKLDYFSMLFMPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNSNSWELQQLFTM--D-VPLFPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKTTQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLDNEQDIRKMGGLFKALPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSNTNAWALIITLLATS-LTAVYSTRIIFYVLMGQPRFSTLTSINENNPQLLNSIKRLLIGSIIAGFILSYNIPPMNIPVLTMPIHLKLTALLVTILGFVIAMELNSMTLYLQ--TKMYSNMSKFSTLLGYFPTIIHRLSPHLNLVMSQKLSSILLDLIWLEKTIPKFTANLHSMAST--MSSNQKGLIKLYFLS---FLIST--LLAIISMF---------YFHA---- +>Syncerus_caffer_African_buffalo +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSS-RLVSNRLISLQRWMIQLVSKQMMSIHNTKGQTWTLMLMSLILFIGTTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFMILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFHY-NPELT-PTKTSKQ-NTP-W-EAKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMVPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGSRSHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG---MTHIRKSHPLMKILNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMIHLLFLHETGSNNPTGISSDTDKIPFHPYYTIKDILGALLLILALMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILIIMPLLHTSKQRSMMFRPLSQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPTASTIENNLL---KW--------MF--------MINMLMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSVSMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLIITQEQMWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTAILFLGTSHNPYMPELYTINFTVKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIILSSI-P-PQT--MNP-IIFIIILSTVMMGTIIVMISSHWLLIWIGFEMNMLAIIPILMKNHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLDLILTL-SVLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLTIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKMPIMTVLVLTTLLSMGGLPPLSGFMPKWMIIQEMTKNDNVILPTLMAMTALLNLYFYMRLAYSTTLTMFPSTNNMKMKW-QFSPTKQMTLL-------PTMAVLSAMLLPLTPMLSLLE---MN-LMLALLTNFTLATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIILLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMAALTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLKCMLKYIIPTMMLMPLTWLSKNNMIWINSTAHSLLISLTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLARKKLFITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALVYIQSTVGSLNFLLLQYWVQPMP-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTDFMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELLVVMSTFSWSNTTIILMGVNMVITALYSLYMLIMTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPMVILGSLY------MNMFSSL-MLTTLFLLTMPIMMT---SLNTYKN-PNYPLYVKTT-ISCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLVLVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLANLNTWDLQQIFMLNPE-NSNMPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLIQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFTLLGQPRFPTLITINENNPYLINSIKRLLIGSLFAGFIISNNIPPMTIPQMTMPHYLKTMALMVTVLGFILALEISNMTQNLK--FNYPSNAFKFSNLLGYFPTIMHRLAPYMNLSMSQKLASSILDLIWLENILPKTTSLIQMKTST--MVTNQKGLIKLYFLS---FLVTI--TISMILF----------NFHE---- +>Hylobates_lar_common_gibbon +----MNENLFTSFATPT-ILGLPAAVPIILFPSLLIPTSK-YLINNRLITTQQWLIQLTLKQMMTMHNTKGRTWSLMLISLITFIATTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVATGFRLKAKNTLAHLLPQGTPTPLIPMLIIIETISLFIQPVALAVRLTANITAGHLLMHLIGAATMALST-ISLPATPIIFTVLTLLTTLEIAVALIQAYVFTLLVSLYLHDNTMPQLNTTVWPTIIMSML-LALFLLMQLKTLNTHYHP-PASPK-LTNIKPH-NNP-W-EHKWTKIYSL-HS-LPPQF---MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSDTKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDQTYAKIHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGSFISLTAVMLMIFMIWEAFASKRKILMIEQPSTNLEWLYGCPPPYHTFEEPVYMKP----------MAHATQVGLQDATSPIMEELISFHDHALMIIFLISFLVLYALFLTLTTKLTNTNITDAQEMETVWTILPAIILVLIALPSLRILYLTDEINDPSFTIKAIGHQWYWAYEYTDYGGLIFNSYMLPPLFLEPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTVPSLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPVFTL----------MTHQSHAYHMVKPSPWPLTGALSALLLTSGLAMWFHFHSTTLLTLSMLTNALTMFQWWRDVVREGTYQGHHTMPVQKGLRYGMVLFITSEIFFFAGFFWAFYHSSLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLITILLGIYFTLLQISEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICLIRQLLFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTPLRKTNPLMKLINHSLIDLPAPSNISMWWNFGSLLGACLILQIITGLFLAMHYTPDASTAFSSVAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYYGSFLYLETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTDLVQWVWGGYSVDNATLTRFFTFHFILPFIITALAALHLLFLHETGSNNPLGISSQPDKIAFHPYYTIKDILGLFLLLLMLMSLVLFSPDLLGDPSNYTQANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAMIPALHTAKQQSMMFRPLSQLTYWLLVMNLLILTWIGGQPVSYPFITIGQVASALYFTTILVLMPAASLIENKML---KWT-------MP--------MINLLLLILPTLIAMAFLMLTERKILGYTQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTALYIIAPTLALTIALLLWTPLPMPNPLINLNLGLLFILATSSLTVYSILWSGWASNSNYALIGALRAVAQTISYEVTSAIILLSVLLMSGSFNLSTLITTQEHIWLLLPTWPLAMMWFISTLAETNRTPFDLTEGESELVSGFNTEYAAGPFALFFMAEYVNIIMMNALTTMIFLGTTHNAHRPELYTTCFTIKTLLLTSLFLWIRTTYPRFRYDQLMYLLWKNFLPLTLTLLMWYISLSTMIASI-P-PQT--MNP-LAQPIIYSTIFAGTLITASSSHWFLTWVGLEMNMLAFIPVLTKKMNPR-STEAAIKYFLVQATASMILMMAILSNNLLSGQW--TMANITNQYSSTMMLMALAMKLGMAPFHFWVPEVTQGTTLMSGLLLLTWQKLAPISIMYQIFPVVNVNILLAF-SILSIMVGSWGGLNQTQLRKILAYSSITHVGWMMAVLPYNPDITIFNLIIYIVLTTTAFLALNLNSSTTTLLL---SRSWNKLTWLLPLIPSTLLSLGGLPPLTGFLPKWLVIEELTKNGTLIIPTAMAIITLINLYFYMRLIYSTSITLLPTSNNVKMKW-QFENTKPTFLL-------PTLMTLTTLLLPIAPLTFPTP---MN-LALALMINTLLALLLMTITFWLPQLNTYMEKTNPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNPSLTIASSLTLITILILSLAYEWSQKG--LDWVE-MPLIYMNITLAFAISLLGMLIYRSHLMSSLLCLEGMMLSLFIMSTLMALNTHSLLINIMPVVLLVFAACEAAVGLALLVSISNTYGLDHIHNLNLLQCMLKLIIPTTMLLPLTWLSKKHMIWINTTTHSLIISPIPL-LFFNQANNNLFTYS-LSFSSDPLTTPLLMLTTWLLPLMIMASQHHLSNEPPLRKKLYLSMLIILQVSLIMTFTATELMMFYVLFETTLIPTLVIITRWGNQPERLNAGSYFLFYTLVGSLPLLIALIHTHNTLGSLNIMLLTLSSQNLT-DSW-----SNNLMWLAYMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILSP-LTKHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAILIQTPWSFTGATVLMIAHGLTSSLLFCLANSNYERTHSRIMILSRGLQALLPLMAFWWLAASLANLALPPTINLLGELFVLMASFSWANTTITLTGLNVLITALYSLYMFIMTQRGTLTHHIKNMKPSLTRENMLMLMHLFPLLLLTLNPNIITGFTP------MAMYTTM-AILTLTSLIPPITAT---LINPNKK-NLYPHYVKMT-IASTFMISLFPTMMFMCTDQETIISNWHWTATQTLELSLSFKLDYFSMMFIPIALFVTWSIMEFSLWYMHSDPNINQFFKYLLIFLTTMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHAREEANTAAIQAILYNRIGDIGFILALAWFLLHTNSWEPQQMILLNSN-PNFLPLAGLLLAARGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLTENNQLIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMVVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTLPLTSTSLTIGSLALTGMPFLTGFYSKDLIIETANMSYTNAWALSTTLIATS-LTSAYSTRMILLTLTNRPRFPTLTNINENNPTLLNPIKRLTIGSLLAGFLIINSIPPTSPSQTTIPLYLKLTALSITLLGFLTAFDLHLLTNKLK--MKNPSHTFHFSNMLGFYPNTIHRTIPYASLTMSQNLASLLLDLAWLEKLMPKTISHHQISASV--TISSQKGMIKLYSLS---LLIPL--SLTLLLIM----------------- +>Lobodon_carcinophaga_crabeater_seal +----MNENLFASFTTPT-MMGLPIVILIILFPSILFPSPN-RLINNRLISIQQWLIQLTSKQMLSIHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVIMGFRHKMKASLAHFLPQGTPLLLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLMD-ISTVTASITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSIVILSMI-LTLFIMFQLKISKHHFPT-NPEPK-QTLLSKS-NTP-W-EEKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQIPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFTLDDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFASKREVAVVELTTTNIEWLHGCPPPYHTFEEPTYVVL-K--------MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMYLLLLGLTTNTLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFMRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSFIDLPTPPNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFTETWNIGIILLFTIMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFILPFVASALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALLLILILMLLVLFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALMLSILILAIIPLLHTSKQRGMMFRPISQCLFWLLVADLLTLTWIGGQPVEHPYITIGQLASILYFTILLVLMPITSIIENNIL---KW--------MF--------MINIASLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSTSMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIMMNIFTTLLFFGAFHTPYMPELYTINFIMKTLMLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIISASI-P-PQT--MKP-YILVIIMTTVMSGTTIVLTSSHWLLTWIGFEMNMLAIIPILMKNYNPR-AMEASTKYFLTQATASMLLMMGIIINLMFSGQW--VISKIPNPIASGLITIALAMKLGMAPFHFWVPEVTQGISLPSGMILLTWQKIAPLSVLYQISPSINPKLMIPM-AIASVLVGGWGGLNQTQLRKILAYSSIAHMGWMAVILTYNPTLMLLNLVIYIMMTLSTFMLFMHNSSTTMSSL---SQTWNKLPLLTSLILMLMLSLGGLPPLSGFTPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTTLTMFPSANNMKMKW-QFESTKKIILL-------PPLIITSTMLLPMTPMLSILE---MN-MVLALFTNTALASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHTNNLTTMLTMALLLISLLAASLAYEWTEKG--LEWTE-MTMVYANIFLAFITSLMGLLMYRSHLMSSLLCLEGMMLSLFVMMTVTILNNHFTLASMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIILPTMMLVPLTWMSKPNMIWINTTTYSLLISLISL-PFLNQLNDNCMNLS-LLFFTDSLSAPLLSLTTWLLPLMLMASQFHLSKESLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQTERLNAGMYFLFYTLVGSLPLLVALLFIQNNMGTLNFLMLQLWTQPML-NSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMLLNP-LTNSMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQVLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNITIILMGTNIIITALYSLYMLITTQRGKYTHHIKNIKPSFTRENALMALHLTPLLLLSLNPKIILGPIY------MNLFTSS-IITSLFMLTLPIILT---STPIYKN-KLYPQYVKTT-ISYAFMISMIPTMMFIYSGKEMIISNWHWMTIQTMKLTLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAVLYNRIGDVGFIMAMAWFLINLNTWEFQQIFITHHD-NLNMPLMSLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEYNTTAQTATLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLYKVLPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLLTLVATS-MTAAYSTRILFFALLGQPRFNPMITTNENNPHLINSIKRLLLGSIFAGYLISQNITPTTIPQMTMPYYLKWTALTVTLLGFILALELNLTSQSLK--LKYPSNLFKFSNLLGYFPIIIHRYVPNMNLSASQKLASTLLDTIWLESALPKSISYFHMKSST--TISNQKGLIKLYFLS---FVITL--ILALTMI----------NFHE---- +>Nomascus_siki_southern_white-cheeked_gibbon +----MNENLFASFAAPT-ILGLPAAVPIILFPSLLIPTSK-YLINNRLVTTQRWLIQLTLKQMMTMHNAKGRTWSLMLISLITFIATTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVATGFRLKAKNTFAHLLPQGTPTPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGAATLALST-ISLSATPIIFTVLALLTILEVAVALIQAYVFTLLVSLYLHDNTMPQLNTTVWPTIIMSML-LALFLLIQLKTLNMHYHP-PASPK-LTDTKPH-NNP-W-EHKWTKIYSL-HS-LPPQS---MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSDTKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDQTYAKIHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGSFISLTAVMLMIFMVWEAFASKRKILMIEQPSTNLEWLYGCPPPYHTFEEPVYMKP----------MAHATQVGLQDATSPIMEELISFHDHALMIIFLISFLVLYALFLTLTTKLTNTNITDAQEMETIWTILPAIILVLIALPSLRILYLTDEINDPSLTIKAIGHQWYWAYEYTDYGGLVFNSYMLPPLFLEPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTVPSLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPVFTL----------MTHQSHAYHMVKPSPWPLTGALSALLLTSGLAMWFHFHTTTLLTLSMLTNTLTMFQWWRDVVREGTYQGHHTMPVQKGLRYGMILFITSEIFFFAGFFWAFYHSSLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALFITILLGIYFTLLQISEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIICLIRQLLFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTPLRKTNPLMKLINHSLVDLPAPSNISMWWNLGSLLGTCLVLQIVTGLFLAMHYTPDASMAFSSVAHITRDVNYGWVIRYLHANGASMFFICLFLHIGRGLYYGSFLYLETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTDLVQWVWGGYSVDNATLTRFFTFHFILPFIITALVALHLLFLHETGSNNPLGISSQPDKITFHPYYTTKDILGLFLLLLTLMSLVLFSPDLLGDPDNYIQANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMTIPMLHTAKQQSMMFRPLSQLTYWLWAANLLTLTWIGGQPVSYPFITIGQVTSVLYFITILILVPTASLIENKML---KWT-------MP--------TTNLLLLILPTLIAMAFLMLTERKILGYTQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPSTSTTTLYIIAPTLALTIALLLWTPLPMPNPLINLNLGLLFILATSSLTVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFNLSTLITTQEHIWLLLPTWPLAMMWFISTLAETNRTPFDLTEGESELVSGFNTEYAAGPFALFFMAEYMNIIMMNALTNMIFLGTTYDAHLPELYTTCFAVKTLLLTSLFLWIRTTYPRFRYDQLMYLLWKNFLPLTLALLMWHLSLSAMIASI-P-PQT--MNP-LAQPIIYSAVFAGTLIAASSSHWFLTWVGLEMNMLAFIPILTKKTNPR-STEAAIKYFLVQATASMILMMAILSNNLLSGQW--TMTSTTNQYSSLMILTALAMKLGMAPFHFWVPEVTQGTTLTSGLLLLTWQKLAPISIMYQIFPVVNTNILLTF-STLSIMVGSWGGLNQTQLRKILAYSSITHMGWMMAILPYNPNITIFNLTIYIVLTTTAFLALNLNSSTTTLLL---SRSWNKLTWLLPLIPSTLLSLGGLPPLSGFLPKWLVIEELTKNGSLVIPTIMAIITLANLYFYTRLIYSTSITLFPTSNNVKMKW-QFENTKPTLLL-------PTLTVLTTLLLPIAPLMSPAP---MN-LTLAMTISTLLALLLMIITFWLPQLNTYMEKSNPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNPSLTITSSLTLIIILILSLAYEWSQKG--LDWVE-MPLIYMNIMLAFTISLLGMLIYRSHLMSSLLCLEGMMLSLFIMSTLMALNTHSLLINIMPIVLLVFAACEAAVGLALLVSISNTYGLDHIHNLNLLQCMLKLIIPTIMLLPLTWLSKKHMIWINTTTHSLIISPIPL-LFLSQA-NNLFIHS-PSFSSDPLTTPLLMLTTWLLPLMIMASQHHLSNESLLRKKLYLSMLITLQVSLIMTFTATELMMFYILFETTLIPTLIIITRWGNQPERLNAGSYFLFYTLVGSLPLLIALIHTHNTLGSLNIMLLTLSSPSLA-NSW-----SNNIMWLACVMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILSP-LTKHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSFAGATILMVAHGLTSSLLFCLANSNYERTHSRTMILSRGLQILLPLMAFWWLTASLANLALPPTINLLGELFVLMASFSWANTTIALTGLNMLITALYSLYMFITTQRGTLTHHIKNMKPSLTRENMLMFMHLFPLLLLSLNPNIITGPTP--------MYTAM-TILTLISLIPPVATA---LTNTNKK-SSYPHYVKTI-IASTFMVSLLPTTMFMCTDQETIISNWHWTATQTLELSLSFKLDYFSMMFIPVALFVTWSIMEFSLWYMHSDPNINQFFKYLLIFLTTMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYAREEANTAAIQAILYNRIGDIGFILALAWFLFHTNSWEPQQMLLLNTS-SNFLPLAGLLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNQPIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTLPLTSTSLTIGSLALTGMPFLTGFYSKDPIIETANMSYTNAWALSMTLIATS-LTSAYSTRMILLTLTNQPRFPTLININENDPSLLNPIKRLTAGSLLAGFLIINSIPPISPSQTTVPLYLKLTALSVTLLGFLTAFDLYLLANKLK--MKNPSHTFRFSNMLGFYPNTIHRTIPYTSLLMSQNLASLLLDLAWLEKSMPKAISHHQISAST--TISSQKGMIKLYSLS---LLIPL--SLALLLIV----------------- +>Hylobates_pileatus_pileated_gibbon +----MNENLFAPFATPT-ILGLPAAVPIILFPSLLVPTSK-YLINNRLIATQQWLIQLTLKQMMTVHSTKGRTWSLMLISLITFIATTNLLGLLPHSFTPTTQLSMNLAMAVPLWAGTVATGLRLKTKNTLAHLLPQGTPTPLIPMLIIIETISLFIQPVALAVRLTANITAGHLLMHLIGAATLALST-ISLPATPIIFTILALLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTTVWPTIIMSML-LALFLLMQLKTLNTHYHP-PASPK-LTNIKSR-NNP-W-EHKWTKIYSL-HS-LPPQF---MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSDTKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDQTYAKIHFVIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGSFISLTAVMLMIFMIWEAFASKRKILMIEQPSTNLEWLYGCPPPYHTFEEPVYMKP----------MAHATQVGLQDATSPIMEELISFHDHALMIIFLISFLVLYALFLTLTTKLTNTNITDAQEMETVWTILPAIILVLIALPSLRILYLTDEINDPSFTIKAIGHQWYWAYEYTDYGGLIFNSYMLPPLFLEPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTVPSLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPVFTL----------MTHQSHAYHMVKPSPWPLTGALSALLLTSGLAMWFHFHSTTLLTLSALTNALTMFQWWRDVVREGTYQGHHTTPVQKGLRYGMVLFITSEIFFFAGFFWAFYHSSLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLITILLGTYFTLLQISEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIICLIRQLLFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTPLRKTNPLMKLINHSLIDLPTPSNISTWWNFGSLLGACLILQIITGLFLAMHYTPDASTAFSSVAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYYGSFLYLETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTDLVQWVWGGYSVDNATLTRFFTFHFILPFIITALVTLHLLFLHETGSNNPLGISSQPDKITFHPYYTIKDILGLLLLLFMLMSLVLFSPDLLGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILVMIPALHTAKQQSMMFRPLSQLTYWLLVMNLLTLTWIGGQPVSYPFIIIGQVASVLYFTTILVLMPAASLIENKML---KWT-------MP--------MTNLLLLILPTLIAMAFLMLTERKILGYTQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTTLYIIAPTLALTIALLLWTPLPMPNPLINLNLGLLFILATSSLTVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFNLSTLITTQEHIWLLLPTWPLAMMWFISTLAETNRTPFDLTEGESELVSGFNTEYAAGPFALFFMAEYVNIIMMNALTTMIFLGTTYNAHLPELYTTCFTIKTLLLTSLFLWIRTTYPRFRYDQLMYLLWKNFLPLTLALLMWYTSLSTMIAST-P-PQT--MNP-LAQPIIYSTIFAGTLITASSSHWFLTWVGLEMNMLAFIPVLTKKMNPR-STEAAIKYFLVQATASMIFMMAILSNNLLSGQW--TMTNITNQYSSLMMLTALAMKLGMAPFHFWVPEVTQGTTLTSGLLLLTWQKLAPISIMYQIFPVVNMNVLLTF-SILSILVGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPDITIFNLTIYIVLTTTAFLALNLNSSTTTLLL---SRSWNKLTWLLPLIPSTLLSLGGLPPLTGFLPKWLVIEELTKNGTLIIPTIMAIVTLINLYFYMRLIYSTSITLLPTSNNVKMKW-QFENMKPTFLL-------PTFITLTTLLLPIAPLTFPTP---MN-LALALMVNTLLALLLMTITFWLPQLNTYMEKTNPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTSPSLTIASSLTLITILVLSLAYEWSQKG--LDWVE-MPLIYMNITLAFTISLLGMLVYRTHLMSSLLCLEGMMLSLFIMATLMALNTHSLLINIMPIVLLVFAACEAAVGLALLVSISNTYGLDHIHNLNLLQCMLKLIIPTIMLLPLTWLSKKHMIWINTTTHSLIISPIPL-LFFNQANNNLLTYS-PSFSSDPLTTPLLMLTTWLLPLMIMASQHHLSNEPPLRKKLYLSMLITLQVSLIMTFTATELMMFYVLFETTLIPTLIIITRWGNQPERLNAGSYFLFYTLVGSLPLLIALIHTHNTLGSLNIMLLTLSSQNLT-DSW-----SNNLMWLAYMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNP-LTKHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAILIQTPWSFTGATILMIAHGLTSSLLFCLANSNYERTHSRIMILSRGLQTLLPLMAFWWLAASLANLALPPTINLLGELFVLMASFSWANTTITLTGLNVLITALYSLYMFIMTQRGTLTHHIKNMKPSLTRENMLMLMHLFPLLLLTLNPNIITGFTP--------MYTTT-AILTLTSLIPPITAA---LINPNKK-NSYPHYVKMT-IASTFMISLFPTMMFMCTDQETIISNWHWTTTQTLELSLSFKLDYFSMMFIPIALFVTWSIMEFSLWYMHSDPNINQFFKYLLIFLTTMLILVTANNLFQLFIGWEGVGIMSFLLIGWWCAREEANTAAIQAILYNRIGDIGFILALAWFLLHTNSWEPQQMILLNTN-SNFLPLAGLLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLTENNQLIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTLPLTSTSLTIGSLALTGMPFLTGFYSKDLIIETANMSYTNAWALSTTLIATS-LTSAYSTRMVLLTLTNQPRFPTLTNINENNPTLLNPIKRLTIGSLLAGFLIINSIPPTFPSQTTIPLYLKLTALSITLLGFLAALDLHLLTNKLK--MKNPSQTFYFSNMLGFYPNTIHRIIPYTSLTMSQNLASLLLDLAWLEKLMPKTISHHQISASI--AISSQKGMIKLYSLS---LLIPL--LLVLLLIM----------------- +>Vulpes_vulpes_red_fox +----MNENLFASFATPT-MMGLPIAVLIVMFPSILFPSPN-RLINNRLISIQQWLIQLTSKQMLTIHNQKGRTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALIN-ISATTALITFMILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLVMILSMI-LTLFILFQLKVSKHYYPE-SPGPK-SIKSISK-HTP-W-ENKWTKIYSP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAMVELTTTNIEWLHGCPPPYHTFEEPTYVIQ-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLEMVPLSYFETWSAVMV----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHYNSMSLLTLGLTTNMLTMYQWWRDVVREGTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFMRQLHYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIVNDSFIDLPAPSNISAWWNFGSLLGVCLILQIATGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYVFMETWNIGIILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPSGITSDSDKIPFHPYYTIKDILGVLLLLSVLMSLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILALIPHLHTSKQRGMMFRPLSQCLFWLLTADLLTLTWIGGQPVEHPFIIIGQIASILYFAILLILMPTISIIENNLL---KW--------MF--------FINILSLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSMSMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEHMWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHNPFLPELYSINFTIKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVALPIITASI-P-PQT--MKP-PILIAILATVMTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMMGVTINLLYSGQW--MISKVSNPAASTMMTIALTMKLGLSPFHFWVPEVTQGISLSSGMILLTWQKIAPMSVLYQISPSINTDLMTLV-ALASVLIGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMFLNLSLYILMTLSTFMLFMLSASTTTLSL---SHTWNKIPLIASTILTLMLSLGGLPPLSGFIPKWMIIQELTKNDMIVVPTLMAITALLNLYFYMRLTYSTALTMFPSANNMKMKW-QFEHTKKMTLL-------PPLIIISTMLLPIMPMMSILD---MN-MMLTLMTNITLASLLVMIAFWLPQLNIYADKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLTTMLIMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYINIFLAFILSLMGMLVYRSHLMSSLLCLEGMMLSLFVMMSVTILNNHLTLASMMPIVLLVFAACEAALGLSLLVMVSNTYGTDHVQNLNLLQCMLKIIIPTAMLIPLTWTSKPNMIWINSTMYSLLISLISL-SYLNQPNDNTLNSS-LLFFSDSLSAPLLALTTWLLPLMLMASQSHLSKEPLIRKKLYISMLILLQLFLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYNLTGSLPLLVALLYIQNSMGSLNFLMIQYWIQPLP-SSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLNP-LTDLMVYPFMLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMAAWWLLASLANLALPPTINLIGELFVVMASFSWSNITIILMGMNIIITALYTLYMLITTQRGKHTHHIKNIKPSFTRENALMTLHLLPLLLLSIDPKVVLGPIY------MNMFASC-MITALILLTLPIIMT---STKLYKD-KLYPYYVKTA-TSHAFMISMIPAMMFIYSGQEMVVSNWHWMTIQTMKLSMSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMAMAWFLLHLNAWDLQQIFMSAND-NLNLPLFGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQNPTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSNTNAWALLITLVATS-MTAAYSTRILFFALLGQPRFTPIISINENNPYLINSIKRLLLGSVFAGYVISHSITPTTIPQMTMPHHLKMAALAVTILGFILALELNLTMQGLK--FNHSSHYFKFSNLLGYYPTIMHRLAPKTSLSMSQKSASMLLDHIWLESVLPKSIAFFQMKSST--LVSNQKGLIKLYFFS---FMITM--ALSLSIL----------NYHV---- +>Cynopterus_brachyotis_lesser_short-nosed_fruit_bat +----MNENLFSSFITPT-LMGLPIVTLIIMFPSILFPSTN-RLINNRLIAIQQWLLHLTSKQMMNIHNPTGQKWSLMLMTLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVALGFRHKTKASLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALLN-ISTTTALITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-LTLYIIMQVKISKHSYYQ-SPEPA-ITKTTKH-KSP-W-ESKWTKIYSP-LS-LPQH----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNSTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMVFMIWEAFASKREVSTVELSSLNLEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLHFHDHALMIVFLISSLVLYLISVMLTTSLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPYLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTQDLKPGELRLLEVDNRVVLPMELTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKFFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLAMWFHFNSFSLLSLGLLTNTLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFIGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWSHHSLMEGNRKHMLQALFITILLGSYFTLLQASEYYETPFTIADGVYGSTFFMATGFHGLHVIIGSTFLLVCFIRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLFKLINDALIDLPAPSNISSWWNFGSLLGICLLIQILTGLFLAMHYTSDTATAFQSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGLYYGSYIYTETWNVGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALVVVHLLFLHETGSNNPTGIPSDMDMIPFHPYYTIKDMLGALAMIMALLLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALMPLLHTSKQRSMMFRPLSQCMFWLLVADLLTLTWIGGQPVEHPFIIIGQLASLLYFLLILVLMPLVSIVENHLL---KW--------MF--------LINLLAMIIPIMLAVAFLTLIERKVLGYMQLRKGPNVVGPYGLLQPLADAMKLFIKEPLRPLTSSPSMFIIAPILALTLALMMWIPLPMPYPLINMNLAVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILMSVLLLSGSFSLSTLITTQEHTWLLLSSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFMAEYANILMMNTLTAILFLGAFHNPLTPELYSTNLIIKILLLTVTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVAVPIITASI-P-PQT--MNP-FALIIIMLTVILGTLIVMTSSHWLMVWIGFEMNMLAIIPILMKKYNPR-SMEACTKYFLTQATASMLLMLAITINLVHSGQW--STIKPLNPTASIIMTLAMAMKLGLAPFHFWVPEVAQGIQLSSGLILLTWQKLAPMSILYQISPTINPTLILTL-SILSVAVGGWGGLNQTQLRKIMAYSSIAHMGWMTAAMLFSPMMALLNLAIYIILTTTTLMMFMLNSTTTTLSL---SHTWNKTPLLTTAILTTLLSLGGLPPLSGFLPKWMIIQELTKNDNIILPTFMVITALLNLFFYMRLTYSTSLTTFPSVNNMKLKW-QLSPTKTTIHL-------PPLIILSTLILPLSPMLILLE---MN-LMLTLLIDGLIASLLVLIAFWMPQMNTYAEKSSPYECGFDPMGSARIPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLKSMLMMSLMLISLLAISLAYEWSHKG--LEWAE-MALIYMNMTLAFTVSLLGLLMYRSHLMSSLLCLEGMMLSLFVTMAITILNSHLILASMIPIIMLVFAACEAALGLSLLVMVSNTYGVDHVQNLNLLQCMLKIILPTIMLIPLTWLSKNNMVWINTTAHSLMITLLGL-PLLNQFNDNSLNMS-LTYFSDSLSTPLLMLSMWLLPLMIIASQFHLIKESYTRKKLYITMLIMLQIFLIMTFTATELIFFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLVGSLPLLIALIYTQNMTGSLNILLTQYWSKPLT-ESW-----SNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITVMLNP-TTSSMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTILPLMAAWWLAASLTNLALPPSINLIGEIFVVMSTFSWSSLSIVLMGINITITALYSLYMLIMTQRGKQTPHINNLPPSYTRENTLMAMHLLPLLLLSMNPKVILGTLY------MNLFTSS-MLLTLLILIIPVMTS---NLSIYTK-SSYPNYVKTM-VSYAFMMSLIPTTIFIQSGQDMVISNWHWMTIQTMKLTLSFKLDYFSMIFMPVALFVTWSIMEFSLWYMHSDPNINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFMLIGWWFGRADANTAALQAILYNRIGDVGLLMAMAWFLFNLNTWELQQIFLLNPA-NTNLPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFFPLTENNKTIQTTMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTVGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLSDEQDIRKMGGLYKSLPFTTTALIAGSLALTGMPFLTGFYSKDLIIESINTSYTNAWALMLTLIATS-LTAVYSTRIIYFALMGQPRFPTLILINENNPLLMNPIKRLLVGSIFAGFLISNNITPMTIPQMTMPTHLKMTAIMVTLLGFAVALELNLATQNLK--LESPSNSTKFSTLLGYFPTTMHRLQPFLNLLASQKVASMTLDLTWLENVLPKSISTFQMNTSM--MISTQKGQIKLYFLS---FLITL--ALTLLML----------KYI----- +>Chlorocebus_tantalus_Cercopithecus_tantalus +----MNENLLTLFATPM-ILNQPATIPIIMFPMLLIPTSK-HLINNRLITIQRNLVLFTLKQMMMTHNAKGRTWSLMLMSLITFITTTNLLGLLPHSFTPTTHLSMNLAMAIPLWAATVITGLRFKTKSSLAHLLPQGTPTLLIPMLVMIETISLVIQPVALAVRLTANITAGHLLMHLVGNATLTLLT-ISPPATPLIFTLLTLLTILEIAVALIQAYVFTLLVSLYLHNNTMPQLDTSTWFTTITTTL-LTLYLITQLKLLNMHYYQ-PPQQK-NPHKQTP-NNH-W-QLKWTKICLP-YS-QPQ-----MFISRWLFSTNHKDIGTLYLLFGAWAGIMGTALSLLIRAELGQPGSLLGSDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTMIEAGAGTGWTVYPPLAGNLSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPTGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMTWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSAAMLWALGFIFLFTMGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKAHFIIMFMGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVLSSIGSFISLVAVILMIYMIWEAFASKRKVSMTEQSPTNLEWLNGCPPPYHTFEEPTYVKL----------MAHPVQLGLQDATSPVMEELITFHDYAFMTISLISFLVLYALSSTLTTKLTNTNITDAQEMETTWTILPAVILILIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQSHAYHMVKPSPWPLTGALSALLTTSGLAMWFHFYSTTLLTLGLLTMTLTLHQWWRDIVRESTYQGHHTTPVQKNLRYGMALFIISEVFFFTGFFWAFYHSSLAPTPYLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMNNNRKQTTQALLITILLGIYFTLLQISEYFEAPFTISDGIYGSTFFIATGFHGLHVIIGSTFLLVCLIRQLLYHFTPNHHFGFEAAAWYWHFVDVVWLLLYISIYWWGS--MTPMRKSNPIMKMINHSLIDLPTPSNISMWWNFGSLLAFCLILQIVTGLFLAMHYSPDTSSAFSSIAHITRDVNHGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLLKTWNTGIMLLFLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGYSIGNPTLSRFFTLHFILPFIITTLTTVHLLFLHETGSNNPCGISSDSDKITFHPYYTIKDILGLILLLFILTTLTLLSPDLLNDPDNYTPADPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALFLSILILSIIPMLHNSKQQSMMFRPLSQFLFWLLITTLLTLTWIGSQPVSQPFILIGQLASMTYFATILILMPLTSLIENNLL---KWT-------MT--------TANLLLLVASALTAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTMLYTIAPALAFSIALLLWTPLPMPNPLINFNLGLLFILAMSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLTSGSFNLSMLITTQEHLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFLSTFYPAHSPELFTTCFTTKTLLLTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLAFLMWNILTPITISSI-P-PQT--MNP-LAQLTIYTTMITGTLTTLLSSHWFLAWAGLEMNMLAFIPILIKKTNPR-STEAATKYFLMQSTASMILMMAITLNNLLSGHW--MMTSTTNQLPSLMMTAALAMKLGMAPFHFWIPEVTQGTPLIPGLLLLTWQKLAPISIMYQIYPSINTCTLMTL-STLSIMAGSWGGLNQTQLRKIMGYSSITHMGWMMMTLTYNPTITTLYLTTYIALTTTMFLFLNLNSNTTTLTL---SLTWNKSPQLMPLTMFTLMSLGGLPPLTGFLPKWMTIQELAMNNNFIIPSIMVTMTLLNLYFYMRLIYTVSVSLFPTPNNTKMSW-QLENTKPTPLT-------PTLTIISTLLLPITPLILTVP---MN-LVLALTINTLLTSLLMIIMFWLPQLNSYAEKTNPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWALQTTNLPTMIKSSITLITILTLSLAYEWSQKG--LDWAE-MSPVFINITLAFTISLLGMLVYRSHLMASLLCLEGMMMSLFITIALMASNTHSSLTNIMPITLLVFAACETAVGLALLVSISNTYGLDYIHNLNLLQCMLKMIIPTTMLLPMTWFSTNNMIWINLTTHSLIISLIPL-LFFNQTNNNLLNHS-TYLSSDPLTTPLLTLTAWLLPLMMMASQYHLCNEPPSQKKLYLSTMIFLQTILILTFMATELILFYILFETTLIPTLIIITKWGNQAERLNASTYFLFYTLTGSLPLLIMLTYTYNNAGSLNIMLLTLTDQKLT-TTW-----SHNLVWLACTMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTPILNP-LTEYMAYPFLMLALWGMIMTS--SICLRQTDLKSLIAYSSVSHMSLVTMASLIQTPWSFSGAITLMIAHGLTSSMLFCLANSNYERTHSRIMMLSRGLQTLLPLMTFWWFTANLTNLALPPTINLIGELFVITASFSWSHITIALTGLNMLITALYSLHMFITVQRGKLTHHMINMKPPFTRENTLMFMHLTPIILLSLNPNIILGFTS------MTMHTSI-MMATLASLTLPIITT---FINPNKN-QSYPNHVKTT-TMCAFITSLLPTTLYISLNQETTIWSWHWMMTQTLDLTLSFKLDYFSVMFTPIALFITWSIMEFSLWYMNSDPNINQFFKYLLIFLITMLILTTANNLFQLFIGWEGVGIMSFLLIGWWHSRTDANTAAIQAILYNRIGDIGFILAMAYFLLHYNSWDMQQMLTLNSN-SNPLPLVGLLLAAMGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVYLLIRFHPLMENNTLLQSLTLCLGAITTTFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDVRKMGGLFKTMPLTSTSLLIGNLALTGMPFLTGFYSKDLIIEAANTSYTNAWALFITLIATS-LTSAYSTRVILLTMTGSPRFPTLVNINENNPTLLNPIKRLTMGSIITGFLITYNIPPTSLPQPTMPHYLKLSALYATILGFLMTLDLTSMTNKLK--MNNPSQMFKFSNMLGYFPTTIHRMIPHQNLLMSQNLALLLLDSTWLEKSMPKTIAHAHTTTSK--TITTQKGMIKLYSLS---FLIPL--ALTLLLMM----------------- +>Chlorocebus_sabaeus_green_monkey +----MNENLFTLFATPM-ILNQPATIPIIMFPVLLIPTSK-HLINNRLTTIQRNLVLLALKQMMMTHNAKGRTWSLMLMSLITFITTTNLLGLLPHSFTPTTPTIYKPRYSNPLWAATAITGLRFKTKNSLAHLLPQGTPTLLIPMLVMIETISLIIQPVALAVRLTANITAGHLLMHLIGNTALTLLS-ISPPAALLTFTLLMLLTILEIAVALIQAYVFTLLVSLYLHNNTMPQLDTSTWFITITTML-PTLYLITQLKLLDMCYYQ-SPQQK-NSBKQTP-NNH-W-QLKWTKIYLP-YS-QLQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGIMGTALSLLIRAELGQPGSLLGSDHIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTMIEAGAGTGWTVYPPLAGNLSHPGASVDLVIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPTGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMTWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSAAMLWALGFIFLFTMGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDQTYAKAHFIIMFTGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSIGSFISLVAVILMIYMIWEAFASKRKVSMAEQSPTNLEWLNGCPPPYHTFEEPTYIKL----------MAHPVQLGLQDATSPVMEELITFHDYAFMTISLISFLVLYALSSTLTTKLTNTNITDAQEMETTWTILPAIILILIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQFHAYHMVKPSPWPLTGALSTLLMTSGLVMWFHFYSTTLLTLGLLTMTLTLHQWWRDVVRESTYQGHHTTPVQKNLRYGMVLFIISEIFFFTGFFWAFYHSSLAPTPYLGGHWPPTGITPLDPLEVPLLNTSVLLASGVTITWAHHSLMNNNRKQTTQALLITILLGIYFTLLQISEYFEAPFTISDGIYGSTFFIATGFHGLHVIIGSTFLLICLIRQLLFHFTPNHHFGFEAATWYWHFVDVVWLLLYISIYWWGS--MTPMRKSNPIMKMINHSLIDLPTPSNISMWWNFGSLLAFCLILQIITGLFLAMHYSPDTSSAFSSIAHITRDVNHGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLLKTWNTGIMLLFLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGYSIGNPTLSRFFTLHFILPFIITALTMVHLLFLHETGSNNPCGISSDSDKIPFHPYYTIKDILGLVLLLFILTTLTLLSPNLLNDPDNYIPADPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALFLSILILSIIPTLHNSKQQSMMFRPLSQFLFWFLITTLLTLTWIGSQPVSQPFIFIGQLASTMYFTTVLILMPLTSLIENNLL---KWT-------MT--------TANLMLLVASTLTAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTTLYTIAPALAFSIALLLWTPLPMPNPLINFNLGLLFILAMSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLTSGSFNLNMLITTQEHIWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFLGTFYPTHSPELFTTCFTTKTLLLTSLFLMNSSNMPPIRYDQLMHLLWKNFLPLTLAFLMWNILTPITISSI-P-PQT--MNP-LAQLIIYTTMITGTLTTLLSSHWFLAWAGLEMNMLAFIPILIKKTNPR-STEAATKYFLMQSTASMILMMAITLNNLLSGHW--MMTNTANQLPSLMMTTALAMKLGMAPFHFWIPEVTQGTPLIPGLLLLTWQKLAPISIMCQIHPSINTCALMTL-STLSIMVGSWGGLNQTQLRKIMAYSSITHMGWMMMTLTYNPTITTLYLTMYIALTTTMFLFLNLNSNTTTLTL---SLTWNKSPQLMPLTMFTLMSLGGLPPLTGFLPKWMTIQELXMNXNFVIPSIMVXMTLLNLYFYMRLIYTVSVSLFPTPNNTKMNW-QLENTKPTPLT-------PTLTIISTLLLPITPLILTIP---MN-LVLALTINTLLTSLLMTAMFWLPQLNSYAEKTNPYECGFDPLNPARIPFSMKFFLVALP-LLFDLEIALLCPY-MGSPNNNLPMMIKSSITLIIILTLSLAYEWSQKG--LDWAE-MSPIFMNITLAFTISLLGMLVYRSHLMASLLCLEGMMMSLFIMIALMASNAHSPLTNIMPIILLVFAACETAVGLALLVSISNTYGLDYIHNLNLLQCMLKMIVPTTMLLPMTWFSTNNMIWINLTTHSLIISLIPL-LFFNQTNNNLLNHS-TYLSSDPLTTPLLTLTAWLLPLMMMASQYHLCNQPPSQKKLYLSTMIFLQITLILTFMATELILFYILFETTLIPTLIIITKWGTQAERLNASTYFLFYTLTGSLPLLIMLTYTYNNTGSLNIMLLTLTDQKLT-TTW-----SHNLIWLACMMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEYMAYPFLMLALWGMIMTS--SICLRQTDLKSLIAYSSVSHMSLVIMASLIQTPWSFSGAITLMIAHGLTSSMLFCLANSNYERTHSRIMMLSRGLQTLLPLMTFWWFTANLTNLALPPTINLIGELFVITASFSWSHITIMLTGLNMLITALYSLHMFITMQRGKLTHHMINMKPPFTREXTLMFMHLTPIILLSLNPNIILGFTS------MTMHTSI-MMATLASLTPPIIAT---FINPNKK-QSYPNHVKTT-MMYAFITSLIPTTLYISLNQETTIWSWHWMMTQTLNLTLSFKLDYFSVMFTPIALFITWSIMEFSLWYMSSDPNINQFFKYLLIFLITMLILTTANNLFQLFIGWEGMGIMSFLLIGWWYSRTDANTAAIQAILYNRIGDIGLILAMAYFLLHYNSWDMQQMLTLNPP-KLP-PLMGLLLAAMGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVYLLIRFHPLMESNTLLQSLTLCLGAITTMFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKALLFMCSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLLIGNLALTGMPFLTGFYSKDLIIEATNTSYTNAWALSITFIATS-LTSAYSTRIILLTMTGPPRFSTLMNINENNPTLLNPIKRLTMGSIITGFLITNNIPPTSLPQPTMPHYLKLSALYATILGFLMTLDLTSMTNKLK--MNNPSQMFKFSNMLGYFPTTIHRMVPYQNLLMSQNLALLLLDSMWLEKSMPKMIAHVHTTASK--TVTTQKGMIKLYSLS---FLIPL--TLTLLLMM----------------- +>Chlorocebus_pygerythrus_Cercopithecus_pygerythrus +----MNENLFTSFATPM-ILDQPATIPIIMFPMLLIPTSK-HLINNRLITIQRNLVLFTLKQMMMAHNTKGRTWSLMLVSLITFITTTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVIMGLRFKTESSLAHLLPQGTPTLLIPMLVMIETISLVIQPVALAVRLTANITAGHLLMHLIGNATLTLLT-ISPPATSLIFTLLTLLTILEIAVALIQAYVFTLLVSLYLHNNTMPQLDTSTWFIIITATL-PTLYLITQLKLLNMHYYQ-TPQQK-NSHKQAP-NNH-W-QLKWTKIYLP-HS-QLQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGIMGTALSLLIRAELGQPGSLLGSDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTMIEAGAGTGWTVYPPLAGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPTGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMTWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSAAMLWALGFIFLFTMGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSIGSFISLVAVILMIYMIWEAFASKRKVSMTEQSPTNLEWLNGCPPPYHTFEEPAYVKL----------MAHPVQLGLQDATSPVMEELITFHDYAFMTISLISFLVLYALSSTLTTKLTNTNITDAQEMETTWTILPAVILILIALPSLRILYLTDEVNNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMMPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQSHAYHMVKPSPWPLAGALSALLTTSGLTMWFHFYSTTLLMLGLLTTTLTLHQWWRDVVRESTYQGHHTTPVQKNLRYGMVLFIISEIFFFTGFFWAFYHSSLAPTPYLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHYSLMNNNRKQTTQALLITILLGIYFTLLQISEYFEAPFTISDGIYGSTFFIATGFHGFHVIIGSTFLLICLIRQLLHHFTPNHHFGFEAAAWYWHFVDVVWLLLYISIYWWGS--MTPMRKSNPIMKMINHSLIDLPTPSNISMWWNFGSLLAFCLILQIITGLFLAMHYSPDTSSAFSSIAHITRDVNHGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLLKTWTTGIMLLFLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGYSIGNPTLSRFFTLHFILPFIITALTTVHLLFLHETGSNNPCGISSNSDKIAFHPYYTIKDILGLILLLFTLTTLTLLSPDLPNDPDNYIPADPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALFLSILILSIIPMLHNSKQQSMMFRPLSQFLFWLLIATLLTLTWIGSQPVSQPFILIGQLASMTYFTTILILMPLTSLIENNLL---KWT-------MT--------TANLLLLAASTLIAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTMLYTIAPALAFSIALLLWTPLPMPNPLINFNLGLLFILAMSSLTAHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSILLTSGSFNLNMLITTQEHLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFLGTFYPIHSPELFTTCFTTKTLLLTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLAFLMWNILTPITISSI-P-PQT--MNP-LAQLTIYTTMITGTLTTLLSSHWFLAWAGLEMNMLAFIPILIKKTNPR-STEAATKYFLMQSTASMILMMAITLNNLLSGHW--MMTSTTNQLPSLMMTAALAMKLGMAPFHFWIPEVTQGTPLTPGLLLLTWQKLAPISIMYQIHPSINTSALMTL-STLSIMMGSWGGLNQTQLRKIMGYSSITHMGWMMMTLTYNPTITTLYLTTYIALTTTMFLFLNLNSNTTTLTL---SLTWNKSPQLMPLTMFTLMSLGGLPPLTGFLPKWMTIQELAMNNNFIIPSIMVTMTLLNLYFYMRLIYTVSVSLFPTPNNTKMSW-QLENMKPTPLT-------PTLTVISTLLLPITPLILTVP---MN-LVLALTINTLLTSLLMIIMFWLPQLNSYAEKTNPYECGFDPLNPARIPFSMKFFLIAITFLLFDLEIALLLSLPWALQTTNLPMMTKSSITLIIILTLSLAYEWSQKG--LDWAE-MSPIFINITLAFTISLLGMLVYRSHLMASLLCLEGMMMSLFIMIALMASNTHSSLANITPITLLVFAACETAVGLALLVSISNTYGLDYIHNLSLLQCMLKMIIPTTMLLPMTWFSTNNMIWINLTMHSLIISLIPL-LFFNQTNNNLLNHS-TYLSSDPLTTPLLTLTAWLLPLMMMASQYHLCNEPPSQKKLYLSTMIFLQITLILTFMATELILFYILFETTLIPTLIIITKWGNQAERLNASTYFLFYTLTGSLPLLIMLTYTYNNTGSLNIMLLTLTDQKLT-TTW-----SHNLVWLACTMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEHMAYPFLMLALWGMIMTS--SICLRQTDLKSLIAYSSVSHMSLVIMASLIQTPWSFSGAITLMIAHGLTSSMLFCLANSNYERTHSRIMMLSRGLQTLLPLMTFWWFTANLTNLALPPTINLIGELFVIMASFSWSHITIVLTGLNMLITALYSLHMFITMQRGKLTHHMINMKPPFTRENTLMFMHLAPIILLSLNPNIILGFTS--------MHTSI-MMATLASLTLPIITT---FINPNKK-RSYPNHVKTT-MMYAFITSLLPTTLYISLNQETTIWSWHWMMTQTLDLTLSFKLDYFSVMFTPIALFITWSIMEFSLWYMSSDPNINQFFKYLLIFLITMLILTTANNLFQLFIGWEGVGIMSFLLIGWWHSRTDANTAAIQAILYNRIGDIGFILAMAYFLLHYNSWDMQQMLTLNSN-SNPLPLVGLLLAAMGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVYLLIRFHPLMENNTLLQSLTLCLGAITTTFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLLIGNLALTGMPFLTGFYSKDLIIETTNTSYTNAWALFITLIATS-LTSAYSTRIILLTMTGSPRFPTLMNINENNPTLLNPIKRLTMGSIITGFLITYNIPPTSLPQPTMPHYLKLSALYATILGFLMTLDLISMTNKLK--MNNPSQMFKFSNMLGYFPTTIHRMIPYQNLLMSQNLALLLLDSMWLEKSMPKMVVHAHTTTSK--TITTQKGMIKLYSLS---FLIPL--TLTLLLMM----------------- +>Rhinolophus_formosae_Formosan_woolly_horseshoe_bat +----MNENLFASFITPT-MMGLPIVILIIMFPTILFPTTN-RLISNRLAAIQQWLIHMTSKQMMTIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNPDMAIPLWAGTVILGFRHKTKASLAHFLPQGIPLPLIPMLVIIETISLFIQPMPLAGRLTANVTTGHLLILLIGRAPLALLI-INMATALVTFVILVLLTILKFAVSLIQAYVFTLLVSLYLHDNTMPQLDTSTWLITIFSMI-LTLFIMMQLKVSKHVFHS-SPEPL-EIKSSKH-STP-W-ETKWTKIYSP-LS-LPQR----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLDTTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMVFMVWEAFASKREVLTVELTTTNLEWMHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLHFHDHALMIVFLISSLVLYIISLMLTTNLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRVVLPMELTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKHFEKWSSTMV----------MTHQTHAYHMVNPCPWPLTGALSALLMTSGLVMWFHLNSTLLLTLGLLANMLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFSWIFWAFYHSSLAPTPELGGCWPPASIHPLYPLGVPLLNTSVLLASGVSITWAHHSLMEGNWNHMLQALFITITLGLYFTLLQASEYYETSFTIAEGVYSSTFFMATGFHGLHVIIGSTFLIVCFLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLFKIINDSFVDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTSDTTTAFYSVTHICRDVNYGWVLRYLHANGASMFFICLFLHVGRGIYYGSYTFSETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTTLVEWVWGGFSVDKATLTRFFALHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSDMDMIPFHPYYTIKDILGLVLMLTVLMSLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAAIPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIMIGQLASILYFLIILILMTLASSAENHLL---KW--------MF--------MINLLLLIVPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFTKEPLRPLTSSISMFIIAPVLALTLALTMWTPLPMPHPLINLNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVHLLNGSFSLSTLITTQEFTWLVFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNIFTVTLFLGAFHNPLMPELYTTNFMLKSLILTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVAMPVITAGI-P-PQT--MNP-LILTMILSTVALGTLIVMTSSHWLLVWIGFEMNMLAIIPMMMKRSNPR-STEASTKYFLTQATASMLLMLTIIINLLHSGQW--TVTNTLTPTASTIMTLALTMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYQISHSINLNILLTM-SMLSILMGGWGGLNQTQLRKILAYSSIAHMGWMTAIMAYNPTMALLNLILYILMTTTTFTLFMANSSTTTLAL---SHSWNKTPVLTASILAIMLSLGGLPPLTGFLPKWMIIQELTKNDSIILPTMMAITALLNLYFYMRLTYTTSLTMFPSTNNMKIKW-QFVNTKWTTYM-------APMIILSTLTLPLAPMLSTLN---MN-FMLTLLTNTLLALLLVTIAFWLPQTNVYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQANNLNTMLTTALLLISLLAISLAYEWSQKG--LEWTE-MALIYMNTMMAFTISLLGLLLYRSHLMSSLLCLEGMMLSMFVMVTVIILNTHLTTSSMMPIVLLVFAACEAALGLSLLVMVSNNYGVDYVQNLNLLQCMLKIIFPTIMLIPLVWLSKHTMIWINPTAYSLLISLLSL-PMLNQFTDNSLNSS-LVFFSDSLSTPLLMLTTWLLPLMLIASHYHLAHEPLNQKKLFMTMLILLQVFLIMTFTATELILFYILFEATLLPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNITGTLNFLLSTYWLQPLS-PSW-----SNAFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMFLNP-VTDFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTILPLMAAWWLLASLTNLALPPTINLIGELFVVMSTFSWSSMSIILMGTNIVITALYSLYMLIMTQRGKHTYHINNLTPTFTRENTLMTMHIMPLLLLSINPKIILGALY------MNLFTPL-MLTSLLILIIPIIMT---TLNLHKT-NTYPHYVKTT-IVWAFTISLIPTMMFLQSGQEMILMNWHWMSIQTLKISMSFKLDYFSMIFTPVALFVTWSIMEFSMWYMHSDPYIDRFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFLMAMAWFLFNTNTWELQQIFSLNLD-NTNLPLTGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLIENNKTIQSVVLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLYKTLPFTTTALTVGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLITLIATS-LTAVYSTRIIFFALLGQPRFPSLILINENNPYLMNSIKRLLIGSIFAGFFITNTIPTMTVPQMTMPWYLKITALFVTITGFTIAMDLSSATQNLK--FKHPSTQFKFSNLLGYFPTVMHRLMPLMNLSLSQKTASLLLDLTWMENALPKSISLLQMKTST--LVSNQKGQIKLYFLS---FFLTL--IMSLIML----------NLHE---- +>Madoqua_kirkii_Kirks_dik-dik +----MNENLFASFITPV-VLGLPLVTLIVLFPSLLFPTSN-RLVNNRLISLQQWILQLVSKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISPTTAFITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYY-NPELT-STNKPKQ-NTP-W-EAKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTATNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVILISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITIALGIYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGVCLILQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILGLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIFMPLIHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASILYFTLILVLMPVASTIENNLL---KW--------MF--------MINILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLMTNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPCVPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFTIILMTVLAGTMIVMISSHWLLIWMGFEMNMLTIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMNLFNPTASTLMTMALAMKLGLAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISQSINLNLILTL-SILSMMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLTIYIIMTSTMFMLFMINSTTTTLSL---SHTWNKTPVITALILTTLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAMTALLNLYFYMRLVYSTALTMFPSTNNMKMKW-QFSTTKKMTLL-------PTMVVASTMLLPLTPMLSTLE---MN-LMLALLTNIALATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLATSLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLANMMPIILLVFAACEAALGLSLLVVVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKSNMLWINSTTHSLLISLTSL-LLMNQFNDSSLNFS-LIFFSDPLSTPLSILTMWLLPLMFMASQHHLSKENLVRKKLFITMLILLQLFLIMTFTATELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYMQNTTGSLNFLILQYWVQPMP-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTLFLNP-VTDFMAYPFIILSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNVTIILMGLNMVITALYSLYMLITTQRGKYTHHINNILPSFTRENALMSLHILPLLLLSLNPKIIMGPLL------MNMFSSL-TLTTLLLLTIPILTT---SFDTHKN-PNYPLHVKTT-ISYAFIISMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPYINQFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGLILAMAWFLINLNTWDLQQIFILNPT-NSNLPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLAGFYSKDLIIEAANTSYTNAWALLMTLLATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPLLINSIKRLLIGSLFAGFIISNNIPPTTVPQMTMPYYLKMMALMVTILGFILALEISNMTYNLK--FNFPSSTFKFSNLLGYYPTIMHRLTPYINLTMSQKSASSLMDLIWLENILPKTTSLIQMKMSV--MITSQKGLIKLYFLS---FLITI--LISMILL----------NFHE---- +>Tragelaphus_angasii_nyala +----MNENLFASFITPM-ILGLPLATLIVLFPSLLFPTPN-RLVNNRLISLQQWALQLGSKQMMAIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLTLMN-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LTLFIVFQLKISKHYFYH-NPQLI-AIKLSKQ-NTP-W-ETKWTKTYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNXAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPYLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTTDLKPGELRLLEVDNRVVLPMEVTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSKILLMLGLTTNMLTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGVCLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNVGVILLFMVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGALLLILALMVLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHMSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPYIIIGQLASIIYFLLILVLMPVISTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSVSMFILAPILALSLALTMWIPLPMPYPLININLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSMPILLAGI-P-PQT--MNP-IIFIIILSTITLGTIIVMISSHWLFIWIGFEMNMLAIIPIMMKNHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMIMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNLILTM-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLTIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKMPIMTVLVLVTLLSMGGLPPLSGFIPKWMIIQEMTKNDSVILPTLMAITALLNLYFYMRLAYTTTLTMFPSTNNMKMKW-QFLTTKRMTLL-------PTMVVLSTMLLPLTPMLLILE---MN-LMLALLTNFSLATLLVIIAFWLPQLNPYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLISLLAASLAYEWTQKG--LEWTE-MSLVYMNIMMAFMVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMAALTILNSHYTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINPTTHSLLISLTSL-LLMNQFGDNSLNFS-PMFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALLYIQKTVGTLNFLVLQYWVQPVP-SSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-TTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVVSTFSWSNMTIILMGVNMVITALYSLYMLIMTQRGKYTYHINNISPSFTRENTLMSLHIIPLLLLSLNPKIILGPLY------MNMFSSF-TLITLLLLTMPVMMT---SFNTHKT-LNYPLYVKTT-ISYAFITSTIPMMMFIHTGQEMTISNWHWLTIQTLKLSLSFKMDYFSMTFVPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDLQQIFMLNPS-NSSMPLLGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKLAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLLTLIATS-FTAIYSTRIIFFALLGQPRFPALVTINENNPLLTNSIKRLLVGSLFAGFIISNSMPPMTIPQMTMPFYLKTTALTVTILGFILALEISNMTQNLK--LYHPSNSFKFSNMLGYYPTIMHRLIPYANLTMSQKSASSLLDLIWLEKILPKTISLAQMKMSI--MVTNQKGLIKLYFLS---FLVTI--LVSIILF----------NFHE---- +>Sciurus_vulgaris_Eurasian_red_squirrel +----MNENLFASFITPT-LMGLPIIILIIAFPNILFPSPN-RLINNRLVSFQQWLIQLVLKQMMTMHNLKGRTWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRHKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTS-ISTPTAMITFIILVLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISMI-LALFMLFQSKIANHSYYS-NPSHK-DMKPTTH-STP-W-EKKWTKIYLP-LS-LPLH----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKIHFTVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMIMIFMIWEAFASKREVLTVELTSTNLEWLHGCPPPYHTFEEPTYVKA----------MAYPFELGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINDPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSELKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKHFENWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSSPLLMLGMMTNMLTMYQWWRDIIREGTFQGHHTTIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPVGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKQMLQALAITIALGLYFTLLQASEYLETSFTISDGIYGSTFFMATGFHGLHVIIGSTFLLVCLMRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLIKIVNHSFIDLPAPSNISAWWNFGSLLGLCLLIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASLFFICLFLHVGRGLYYGSYTYFETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIVTALVMVHLLFLHETGSNNPSGLISDSDKIPFHPYYTIKDILGVLLLLLLFMTLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILMLLPILHVSKQRSMMFRPLSQCLFWILVADLFTLTWIGGQPVEYPFIIIGQVASIIYFTIILLALPSISLLENKLL---KW--------MF--------LINLLFLIIPVMIAMAFLTLVERKMLGYMQLRKGPNVVGPYGLLQPFADAMKLFIKEPLKPSTSSVTLFIIAPTLALTLAITMWIPLPMPQPLINMNMGVLFILATSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQQFMWLILPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFMGALLNPPMPETFTFSFALKTLILTSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIIMACV-P-PQT--MNP-LTSSAIYFTLFSGTLITLFSSHWLLIWVGLEMSLLAIIPILMSKPNPR-SIEAASKYFLIQATASMILMMAAIINFYNTGQW--SISNTINQLSSLMLTLALSMKMGLAPFHLWVPEVTQGIPLMSGLILLTWQKIAPISIMYQIAPSINYNLIMFM-ALMSILLGGWGGLNQTQLRKILAYSSIAHMGWMMAIISFNPSLSILNLLIYMMLTINMFMLLYYNKKTSTLAL---SNSWNKSPLLTSIILMVLMSLGGLPPLTGFFPKWMIIKELVSNNNIILPTLMAIMALLNLYFYMRLIYSTSLTLFPSSNNTKIKW-LFENTKITPLI-------SAIAIASTMSLPLTPILSTLY---MN-LLITLLINISISLILVLVAFWLPQTNIYSEKVSSYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWASQTNNLTLMLTMALVLILILTLGLAYEWIQKG--LEWAE-MPMLTLNLFLAYLTSLLGMFIYRSHLMSSLLCLEGMMLSMFIMTTLATLNTHFMVSFSLPVILLVFAACEAAVGLALLVMVSNTYGMDYVQNLNILQCMLKIILPTILLAPTMWYSKKSLMWVNTSIHSFIISLIVL-LSLYHAEDSNLIFS-PTFFSDPLSTPLLILTAWLLPLMIMASQNHLKKESLVRKKLYILMLISLQLFLIMTFSASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVVLVYIQTSTGSLNFITSLYQSNILP-LTW-----TNNMLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITTLLHP-ITSTMSYPFILLSLWGMIMTS--SVCLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFMGATALMVAHGLTSSMLFCLANTNYERIHSRTMILARGLQSILPLMTTWWVLASLTNLALPPSINLIGELFIIVSTFSWSNVTIVLMGLNMLITALYSLYMLISTQRGKFTYHLININPTHTRENTLMMLHIFPLILLSINPKIILGQLY------MNLFSSL-ILMSLIILLFPIFLS---FTNFYNS-HTFPNYVKTS-IMCALTFCTLPSLMFINYNYELVISNWHWMTIQTMNFTMSFKLDYFSLMFMPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLTMAWFMFNSNSWELQQLFMT--E-TSLLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLENNETAKTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKALPFTSSSLMVGSLALTGTPFLTGFYSKDLIIEAANTSNTNAWALMITLLATS-LTAVYSTRIIFFALMGQPRFSSLTSINENNPQLMNSIKRLLFGSIFAGFLLSYNIPPMNTPLLTMPFYLKTTALFVTIAGFIIAMELNQLTLNLK--LNYYSHSTKFSTLLGYFPITMHRLPPKMNLLISQKLATTLLDQIWMEKTVPKLVAITQSSAST--LTSNHKGLIKLYFLS---FLVST--TLALAMVI---------YFPV---- +>Tragulus_kanchil_ +----MNENLFASFITPT-LLGLPIVILIIMFPAIMFPTSN-RLANNRLVSLQQWLIQLTTKQMLGMHNKKGQTWALMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVIMGFRNKTKKSLAHFLPQGTPTPLIPMLIIIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLVLMN-ISTTTALITFIILMLLTMLEFAVAMIQAYVFTLLVSLYLHDNSMPQLNTSTWAITIMSML-LVLFILFQLKLSKHTYFM-NPELI-PTKTQKH-NTP-W-ELKWTKIYLP-LS-LPQHS---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSAVDLTTTNLEWLNGCPPPYHTFEEPAYINS-K--------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISSMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELNPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSSILLMIGLSTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEILFFTGFFWAFYHSSLAPTPELGGCWPPTGIQPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGHRNHMLQALFITISLGIYFTLLQASEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLVVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLLLQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVLVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGVLVLILTLMLLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIASILILLLMPLLHTSKQRSMMFRPISQCLFWLLAADMLTLTWIGGQPVEHPYIVIGQLASISYFSIILVFMPVAGMIENKLL---KW--------MF--------MVNILTLIVPILLAVAFLTLVERKILGYMQFRKGPNVVGPYGLLQPVADAIKLFTKEPLRPATSSVTMFIMAPILALGLALTMWIPLPMPHPLVNMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSYTLSTLITTQEQLWLIVPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNAFTTILFLGAYHNPYMPELYTANFTIKTLLLTTSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPISLSSI-P-PQT--MNP-IIQIIIMFTLISGTTIVMISSHWLFVWIGFEMNMLAIIPILMKNFNPR-SMEAAVKYFLTQSTASMLLMMAVIINLMFSGQW--TIMNMFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGVPLSSGLILLTWQKLAPISVLYQITPSINLNMMLTM-SALSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMMTILLYNPTITLLNLTIYIIMTSTMFMLFMANSTTTMLSL---SHTWNKTPVMTTLVLVTLLSMGGLPPLSGFMPKWIIIQELTKNNSIILPTFMAITALLNLYFYVRLTYSTALTMFPSTNNMKMKW-QFNSTKHMTLL-------PTMIILSTMLLPLTPILSILE---MN-LMLALLTNFSLAALLVTIAFWLPQLNSYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTEDLTTMLTMALFLISLLAASLAYEWSQKG--LEWTE-MSLVYMNIIVAFTVALMGLLMYRSHLMSSLLCLEGMMLSLFVLAALTILNTHFILANMMPIILLVFAACEAALGLSLLVMISNTYGTDYVQNLNLLQCMLKFIVPTMMLLPLTWLSKNNMIWINTTTHSLVISLTSL-ILLNQHGDNSLNFS-LTFFSDSLSTPLLILTTWLLPLMIMASQNHLSKEPLTRKKLYISMLITLQLLLIMTFTAAELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALMYLQNTTGSLNFMILYYWLQPLP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMLLNP-LTNFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSTFSWSNTTIILMGFNMIITALYSLYMLITTQRGKYTHHINNILPSFTRENALMSLHMLPLLLLSLNPKIILGPMY------MNMFSTL-SLMTLFLLLIPIMMS---TTNHYKN-STFPLYVKTM-VSCAFLTSLVPMMMFIHTGQETIISNWHWMTIQTLKLSMSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAVLYNRIGDVGFLVAMAWFLSNLNSWDFQQIFMLAPD-TPNLPMLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLIQTIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKSMPFTTSALIVGSLALTGMPFLTGFYSKDLIIESANTSHINAWALLVTLIATS-LTAIYSTRIIFFALLEQPRFPPMITINENNPLLINSIKRLLIGSIFAGFFMSNNIPPTTIPQMTMPLYLKLTALAVTITGFTIALEISNLTKNLK--LSHPSSMFKFSTLLGYFPVLIHRSAPHLYLSMSQKSASSLLDLIWLENILPKTTSFAQMKLST--MVTDQKGQIKLYFLS---FLVTI--SISMIIF----------NFHE---- +>Lepus_tolai_ +----MNENLFSSFITPT-MMGLPIVILIIMFPTLLFPAPT-RLINNRLVSAQQWLAQLILKQMMMMHSPKGRTWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGAALALIS-ISPTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLVTIIAMI-LTLFALIQLKFHKYSYPL-SPAPK-TLKPTSF-PSP-W-ETKWTKIYSP-LL-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDQTWAKIHFTVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMVMIFMIWEAFASKREVETVELTTTNLEWLHGCPPPYHTFEEPAYVKA----------MAYPFQLGFQDASSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLSPGDLRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLISTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSLSMI----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSPSLLLIGLLTNTLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIKPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMQQALAITILLGIYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCLLRQLHFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNHSLIDLPAPSNISAWWNFGSLLGLCLMIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWLIRYLHANGASMFFICLYMHVGRGIYYGSYTYLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMIHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDLLGFLMLILLLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIIPLLHMSKQRSMMFRPISQVLFWILVADLLTLTWIGGQPVEHPFITIGQVASILYFSIILILMPLASLIENKIL---KW--------MF--------LINTFLLILPVLLAMAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLRPLTSSSLLFIIAPTLALTLALSMWLPIPMPYPLINLNMGVLFILATSSLAVYSILWSGWASNSKYALFGALRAVAQTISYEVTLAIILLCILLMNGSFTLSSLITTQEYMWILLPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNIIMMNALTAILFLGSFHSHTNPEMFTINFAAKTLLLTMTFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWYISMPIMLSSI-P-PHM--MNP-LIFSIILFTLFLGTMITMFSSHWLTMWIGLEMNMLAIIPILINKATPR-STEAATKYFLTQATASMILMMAITLNILDSGQW--TLINPQNNFTPIMIMLALIIKLGMAPFHFWVPEVTQGVPLKSGLILLTWQKLAPLSILYQISPSIDSTMMMLV-AILSIMVGGWGGLNQTQLRKILAYSSIAHMGWMAAIITFNPNTMILNLIIYILLTTPMFMMFIQHTNTTTLSL---SQMWNKTPLMVTAILITLMSLGGLPPLTGFIPKWIIIQELTKNGNIIMPTMMAMLALLNLYFYLRLIYSSSLTMFPTTNNLKMKW-QFEPMKRMTFM-------APLIILSTMFLPLTPMLSVLN---MN-LILVLLINMSISLILVTIAFWLPQLNIYSEKTTPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAAQFNNLNLVLIMALMLISILALGLAYEWIQKG--LEWVE-MPSIYVNIFLAFIFALLGMLVYRSHLMSSLLCLEGMMLSLFILITLTALNMHYTLSFMFPIVLLVFAACEAAIGLALLVMVSNTYGMDYVQNLNLLQCMLKTIIPTIMLIPTVWWSKNHMIWINATIYSLLISLTTF-LLLNQPNDTNLNLS-TTFFSDALSTPLLMLTVWLLPLMILASQHHLSKESLLRKKTYISLLISLQIFLVMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLLVALIHLQNSMGSLNFLLIQLSNESLT-TSW-----SNSLMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITILLNP-ITEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERVHSRTMLLARGLQTILPLMAAWWLLASLTNLALPPTINLLGELLIVMASFSWSNLTIILMGTNVLITALYSLYMLSTTQRGKFTYHTNNISPTFTRENTLMMLHLAPLLLLSINPKIILGPML------MNLFSTS-MAVSIIILVLPIIAS---FTSIFNH-SNYPYYVKTS-VSYAFMISLIPTLIFIISNQETMVSNWHWMTIHTLKLTTSFKLDYFSMLFTPIALFVTWSIMEFSMWYMHSDPKINQFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFIMAMAWFAINLNTWEFQQMFMSDNN-ITILPLIGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLLENNKIAQTLILCLGAITTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKTLPFTSSALTIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALIITLIATS-LTAVYSTRIIFFALLGQPRYPTLIIINENNPSLINSIKRLALGSIFAGFLITNLVTPNNIPQMTMPLYMKLTALFVTILGFSIAMELNQLSLHLK--MSTQSNSFNFSNMLGFFPATMHRLLPYINLSASQNVATLLLDMTWTEKAIPKNISDIQILAST--SVSSQKGLIKFYSLS---FLISM--LLALFILT----------------- +>Hylopetes_phayrei_Indochinese_flying_squirrel +----MNENLFASFITPT-LMGMPIIILIISFPNILLPTPN-RLINNRLVSFQQWLIQLVLKQMMAMHNLKGRTWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTS-ISPPTAMITFIILILLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTIISMI-LALFILFQSKIANHSYHL-NPSPK-DMKLTLY-NTP-W-EKKWTKIYLP-LS-LPQH----MFINHWLFSTNHKDIGTLYLLFGAWASIVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLDTTWAKIHFTVMFVGVNLTLFPQHLLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMIMIFMVWEVFASKWEVLTVELTTTNLEWLHGCPPPYHTFEEPTYVKA----------MAYPFELGFQDATSPVMKELLHFHDHTLTIVFLISSLVLYIISLMLTTKLTHTSTMDAEEVETIWTILPAIILILIALPSLHILYMMDEINDPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSNLKPGELRLLEVDNRVVLPTEVPVCMLISSEDVLHSWAIPSLRLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKHFENWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSNFLLTLGMLTNILTMYQWWRDIVREGTFQGHHTTIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPVGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALAITITLGLYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLLVCLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIVNHSFIDLPTPSNISAWWNFGSLLGFCLIIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHIGRGLYYGSYTYFETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFVLPFIIAALAMIHLLFLHETGSNNPSGLISDSDKIPFHPYYSIKDLLGALFLLLIFMNLVLFTPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILVLMLFPILHMSKQRSMMFRPLSQCFFWILVADLFTLTWIGGQPVEYPFIAIGQVASILYFTIILIILPSISLLENKLL---KW--------MF--------LLDLLLLIIPIMLAMAFLTLVERKMLGYMQLRKGPNVVGPYGLLQPFADAMKLFIKEPLKPSTSSITLFIIAPTLALTLAITLWIPLPMPQPLINLNMGVLFILATSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQQFIWLLLPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFMGALLNPPIPETFTFSFAIKTLILTSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIIMASV-P-PQI--MNP-MTASIIYFTLFSGTLIALISSHWLLIRVGLELSLLAIIPILIHKANPR-STEAASKYFLIQATASMILMMAVIINFTNSGQW--TITSSINQLSSLMLTMALSMKMGLAPFHLWVPEVTQGVPLLSGLIMLTWQKIAPISIMFQIAPSINFSLIMLM-EMLSIMLGGWGGLNQTQLHKILAYSFIAHMGWMMAIITFNPTLTIFNLIIYIMLTINMFLLLYLNKKTTTLSL---STSWNKSPFLNSIILITLMSLGGLPPWTGFSPKWLIIKELVSNNNIIISTLMAITALLNLYFYMGLIYSTSLTLFPSSNNMKIKW-QFENMKTTFFM-------PTIITMSTLTLPLMPILSTLY---MN-LLLTLLINIIIALLLVTIAFWLPNMNAYAEKTSPYECGFDPMGTARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLMLMLTMALLLVLILTLGLTYEWIQKG--LEWIE-MPLITLNLFLAYLTSLLGMFIYRSHLMSSLLCLEGMMLSMFILSTLIILNTHFLLSFMLPVLLLVFAACEAAVGLALLVMVSNTYGLDYVQNLNILQCMLKIILPTILLAPLTWFSKNSQIWINTSIHSLLISLIVL-FSLLQVNDNSQTFS-TTFFSDSLSTPLLILTAWLLPLMIMASQNHLTKEPLIRKKLYILMLISLQFFLIMTFSASELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIYIQKSTGSLNFMISLYQSNNIP-SSW-----ANNMLWLACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITTILHP-ITNSMAYPFIMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERVHSRTMILARGLQSILPMMATWWVLASLTNLALPPTINLIGELFIIISSFSWSNITIFLMGANMLITALYSLYMLITTQRGKFTYHMLNINPSFTRENTLIFMHIFPLILLSINPKIIMGRLY------MNLMTSL-ILVSLLTLMTPILLA---LTNLYEN-NKYPNYVKTS-IMCALMFSLLPMLMFMNSNYELVISNWHWMTIQTIHLSMSFKLDYFSMMFMPIALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMVILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTEANTAALQAILYNRIGDIGFVLTMAWFMMNSSSWELQQLFMM--D-IPLLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNELAKTIALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTSSSLIIGSLALTGTPFLTGFYSKDFIIESANTSYTNAWALTITLIATS-LTAIYSTRIIFFALMGQPRFSTTTPINENNPLLINSIMRLLIGSVFAGFILSYNIPPMNIPILTMPTYLKMTALLITILGFMIAMELNQLTLNLK--TNYYSYPSKFSNMLGYYPTTIHRIHPYLGLNVSQKTASTLLDLIWMEKSIPKFIANLQTTASI--STSNQKGLIKLYFLS---FLAST--MLALTLTS---------YFLE---- +>Eremitalpa_granti_Grants_golden_mole +----MNENLFASFITPT-LMGLPIVLLIIAFPTILYPSSK-RLISNRLVSFQRWLISLILKQMMAIHTSKGRTWSLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVIMGFRHKTKASLAHFLPQGTPIPSIPMLIIIETISLFIQPTALCVRLTANITAGHLLIHLIGGATLVLMS-ISVPTAIITFIILLLLTMLEFAVALIQAYVFTLLVSLHLHDNTMPQLDTNTWFITIISAM-ITLFILFQMNFLKLIFSP-EPEPK-SLKSLKH-KNP-W-ETKWTKIYLP-HS-SLPH----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYDVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNMAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNINTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLHPTWAKIHFIIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMIFIVWEAFASKREVLTVELTTTNIGWINGCPPPYHTFEEPTYIKA----------MAYPFQMGFQDASSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWTYEYTDYNDLTFDSYMIPSTDLKPGELRLLEVDNRVVLPMELSIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKHFENWSSTMS----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGTIMWFHYNSMILMNIGLISMLLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGISPLNPLEVPLLNTSILLASGVTITWAHHSLMEGNRTQMIQALLITILLGVYFTLLQASEYYETPFTIADGVYGSTFFMATGFHGLHVIIGSTFLMVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTNMRKTHPLLKIINHSFIDLPAPSNISAWWNFGSLLGLCLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNNGWLIRYLHANGASMFFICLFTHVGRGIYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIVAALTLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTVKDLLGSLILLLFLLLLTLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILAAFPLLHLSNQRSLMFRPLSQCMFWILVADLLILTWIGGQPVEHPFIIIGQLASILYFSTILILMPISSIIENQLL---KW--------MF--------IINLLSLIIPILLAVAFLTLIERKVLGYMQLRKGPNIVGPYGLLQPIADAMKLFTKEPLRPQTSSILMFILAPILALTLALTMWIPLPMPTSLININLSLLFILATSSLAVYSILWSGWASNSKYALIGALRRVAQTISYEVSLAIILLSVMLLNGSFSLASLIQTQEHIWLIFPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIILMNALTTTLFLGAYHSPLIPEAYTTNFMIKTLLLTISFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMLYVSIPVMMASI-P-PQT--MNP-IIFSIILSTLILGTLITMISSNWLMAWMGLEINMFAIIPMIIKNHNPR-SIEAATKYFLTQATASMILFLAALTNFMESGQW--TIMSFMNSLPSFLALLALIMKLGMAPFHFWVPEVTQGSYLTSAAILLTWQKLAPLSILYQIYPSINYNLLMFS-GLLSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIIIYEPTLMLLYLTIYIIMTLSSFMLLMGSSNTSTATL---AIMSNKAPLIMILFMGILLSMGGLPPLSGFMPKWLVIQEMTKNSSIIMPFIMATLALLNLYFYMRLIYSSALTMFPSTNNMKIKW-KYTNLSYSTLL-------PTLSTLSMLLLPLTPMMHLLF---MN-LIITLFINSSLAMLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQAGNLKLMLTMALILITLLALGLAYEWLQKG--LEWIE-MSPILFNMMLAFIISLIGLLIYRSHMMSSLLCLEGMMLSLFILTSTLALTMHFTLMTMMPIILLVFAACEAAIGLSLLVMVSNTYGLDYVQNLNLLQCMLKIVIPTIMLLPLTWYSKKDMIWINVTTYSFLINLIAL-PLLNQTMDLSLNMS-LLFSSDALSTPLLILTTWLLPLMLMASQFHLNMESIIRKKTYISMLITLQIFLILTFTASELILFYILFEATLIPTLILITRWGNQTERLNAGLYFLFYTLIGSLPLLVALTLLQNNMGSLNILLIQFIIKPLT-PSF-----SSNFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRISIVLEP-LNYSMAFPFMMLSLWGMVMTS--LICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWGFMGATALMIAHGLTSSMMFCLANTNYERIHSRTMILARGLQSILPLMALWWLTISLANLALPPTINFIGELFITLTVFSWSNFSLLLMGLNMLITALYSLYMLITTQRGKPSYHINSIKPSFTRENALMALHILPLLLLTMNPKIILGTMY------MNLIPTF-TLMMFIILIIPTIMS---LMQIYQT-KLYPYYIKMA-TSHAFIISMFPALIFINSNQEIMISNWHWITINSMKIMLSFKLDYFSLIFIPVALFVTWSIMEFSLWYMEADPNINRFFKYLLMFLITMIILVTANNMLQLFIGWEGVGIMSFLLIGWWYSRTDANTAALQAVLYNRIGDIGFILAMAWFFINSNSWDLQQIMMTNSN-MDILPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPILENNNTILTLMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKPLPLTSSALIIGSLALTGTPFLTGFYSKDLIIETANTSYMNAWALTLTLIATS-MTAIYSTRIIFYALLGQPRFTPIILINENNPSLISAIKRLMFGSIFAGFILSNSIYPTTIPQMTMPIYLKLTALFITILGFVLALELNQMTYYLK--FNTPSSTFKFSNMLGFYPQIMHRLNPLHTLSISQNISSNTIDLTWLEKIIPKTLAHSNLLAST--STTNQKGMIKFYFMS---FLVSF--CLALTFLL----------------- +>Oryx_beisa_ +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWMLQLVSKQMMSIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTATALITFIVLILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQMKISKHNFYY-NPELT-PMGTPKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNMTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPAYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLVFGLTTNTLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGVCLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNVGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGITSDTDKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLVPALHTSKQRSMMFRPISQCIFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPVASTIENNLL---KW--------MF--------MVNTLMLIIPILLAVAFLTLVERKILGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQTWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPILLSSI-P-PQT--MNP-IIFIIILMTIMFGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNSTASMLMTMALTMKLGMAPFHFWVPEVTQGISLSSGLILLTWQKLAPMSVLYQISPSINLNLIMTL-SVLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---AHTWNKAPIMTALVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTFMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFFTTKQMTLL-------PTMVILSTMILPLTPILSTLE---MN-LMMALLTNLTLTTLLVTIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLILLLAVSLAYEWTQKG--LEWTE-MSLVHMNIMVAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLANMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTAMLMPLTWLSKNNMIWINPTLHSLLISLTSL-LLMNQFNDNSLNFS-LIFFSDSLSMPLLILTMWLLPLMLMASQHHLSKENLTRKKLFISMLILLQLFLIMTFTATELIFFYILFEATLVPTLIIITRWGNQAERLNAGLYFLFYTLTGSLPLLVALIHIQDMMGSLNFLILQYWVQPMP-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLILNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLLLLTVPIMMA---GSSTHKT-PNYPLYVKTT-VSCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSILEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLEPS-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKPVQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLVATS-FTAIYSTRIIFFALLGQPRFMTLITINENNPFLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPHYLKLTALTVTILGFILALEISNMTYNLK--FNYPSNTFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLENILPKTISSTQMKMST--VITNQKGLIKLYFLS---FLITI--LTSTILL----------NFHE---- +>Lagorchestes_hirsutus_rufous_hare-wallaby +----MNENLFAPFITPT-ILGITTLPIIMLFPCLLLTSPK-RWLPNRIQILQIWLIRLITKQMMTIHNKQGRSWTLMLMSLILFIASTNLLGLLPYSFTPTTQLSMNIGMAIPLWLATVLMGFRNKPKVSLAHFLPQGTPTPLVPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGSATLALSS-ISLTVSTITFTILFLLTILELAVAMIQAYVFTLLVSLYLHDNSMPQLDTSTWLLTITLMI-LSLFCIYQSKMINQTMTSIPPQDKKQTH-PTT-QLP-W-ETKWTKIYLP-HS-SPLLS---MFITRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDLWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNVISSIGSFISLTAVILMVFIIWEAFASKREVSTVELTTTNIEWLYGCPPPYHTFEQPVFVKV----------MPYPMQLGFQDATSPIMEELTYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETIWTILPAVILVLIALPSLRILYMMDEIYNPYLTVKAMGHQWYWSYEYTDYEDLTFDSYMIPTQDLAPGQLRLLEVDNRVVLPMELPIRVLISSEDVIHAWAVPSLGLKADAVPGRLNQATLTSTRPGVYYGQCSEICGSNHSFMPIVLEMTTLKYFEKWSSMMQ----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSSLLLAVGLTCMLLTMYQWWRDIVREGTFQGHHTPVVQKGLRYGMVLFIVSEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKQMIQALSITILLGLYFTILQASEYYESPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCLFRQFNFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MNNLRKTHPLIKIINHSFIDLPAPSNISAWWNFGSLLGACLLIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWFIRNLHANGASMFFMCLFLHVGRGIYYGSYLYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVLVHLLFLHETGSNNPSGIDPNADKIPFHPYYTIKDALGLMLMLFVLLSLALFSPDMLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLIIPLLHTSKQRSLIFRPISQTLFWILTANLITLTWIGGQPVEQPFIIIGQLASISYFLLIIILMPLAGLFENYMLE-PKW--------MF--------VINLLLYIVPILLAVAFLTLVERKVLGYMQFRKGPNIVGPYGLLQPFADAVKLFTKEPLRPLTSSVSMFIIAPILALTLALTIWTPLPMPHALIDLNLGLLFILSLSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKNLIITQENMWLIVSTWPLAMMWYISTLAETNRAPFDLAEGESELVSGFNVEYAAGSFAMFFLAEYANIMAMNAMTAILFLGSSFNHNFSHLNTLSFMLKTLFLTFVFLWIRASYPRFRYDQLMYLLWKNFLPLTLALCLWFVSIPIALSCI-P-PQI--MSP-YVFLIISMSLLLGTSLTLFSNHWLMAWMGLEINTLAIIPMMTYPNHPR-STEAAIKYFLTQATASMVVMFAVIHNAWMTNQW--TLFQMSNSTASTLMTLALAMKLGLAPFHFWVPEVTQGISLSSGMILLTWQKIAPTALLYQISPTLNMKILIIL-AFLSTMLGGWGGLNQTHLRKILAYSSIAHMGWMIIIMSINPTLALLNLFIYIMATLTLFLMLNFASVTKIKSL---TNLWNKSAPMTTAILLTLLSLGGLPPLTGFMPKWLILQELVSNNNVIMATLMALSALLNLFFYMRIIYASTLTMFPTTNNSKIQW-PYPQTKTINII-------PTLTIISSLLLPLTPLFITLMY-MIN-LIITLIINTTLSTIIVLIAFWLPQLYLYLDKSSPYECGFDPLGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWAIQLPSPNSTLILAYCLIILLTAGLAYEWIQKG--LEWTE-MMSINLNLIMAFLLALAGVLIYRSHLMSTLLCLEGMMLSLFILMALLISHFHMFSASMAPLILLVFSACEAGVGLALLVKTSSNYGNDYVQNLNLLQCMLKILVPTIMLIPLTWYSKKPWVWINPTAYSLLISIASL-TLLYHSTDLGYSYS-NSFYMDSLSGPLVVLSCWLLPLMMIASQNHLMKEPLNRKKTFLTMLIILQSSLIMAFSSSELIMFYILFETTLIPTLIIITRWGNQNERLNAGLYFLFYTLVGSLPLLVALLYLHAKIGTLHILTLTLNPKPMQ-FSM-----PNSILWYACTVAFMVKMPMYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITILTQP-ITAHVYYPFIVLSMWGMIMTS--SICLRQTDLKSLIAYSSISHMALVIIAALMQSTLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQLILPLMCTWWLLASLANLALPPTINLLGELTVIISSFSWSHFSIILLGANTVITALYSLHMLITSQRGKFTHHLYPMKPTFTREHILMMLHMIPLLIISTNPKFILGITY------MNFIFNSTMLLTITMLTFPLIYN---LIFPHKT-NNFPLYCKTM-VKTAFFTSLPALLLFINTGQESTITNWQWFTIESLNMTMSFKLDYFSIIFIPIALYVTWSILEFSLWYMHSDPYIHRFFKYLITFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWFGRTDANTAALQAVLYNRIGDIGFMLAMAWLMINNSSWDLQHIFMTNMD---TLALMGLVIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPMIKDNPTILTVTLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLLNIMPITSSALITGSLALMGTPFLAGFYSKDSIIEAMNTSHTNTWALTITLIATT-LTAIYSLRIIYFALLNQPRFLPMSPINENHPNLINPIIRLAMGSIFAGFILTMNIPPTSMLPLTMPPISKLSALIVTITGLLIAMELNSATNKSL--MMSHIHTHNFSNMLGYFTHLFHRLYPLANLYLGQHIATMLIDLNWYEKTGPKGQANLHSTMSS-YISSTQKGLIKTYFLS---FIISI--PMIMMII------------------ +>Rhinolophus_monoceros_Formosan_Lesser_Horseshoe_Bat +----MNENLFASFITPT-MMGLPIVILIIMFPTILFPSTN-RLISNRLVAIQQWLIHMTSKQMMAIHNPKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPLALAMRLTANIAAGHLLIHLIGGATLALLS-ISTAPPSITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITIFSMI-LTLFIMMQLKVSKHSFHS-NPEPL-EVKSSKH-TTP-W-ETKWTKIYSP-LS-LPQR----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLDSTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMVFMVWEAFASKREVSTVELTTTNLEWMHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTSLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSSSMV----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSSLLLTIGLLANMLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIFLGLYFTLLQASEYHETSFTIADGVYGSTFFMATGFHGLHVIIGSTFLVVCFLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLFKIINDSFIDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTPDTATAFYSVTHICRDVNYGWVLRYLHANGASMFFICLFLHVGRGIYYGSYTFSETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTTLVEWVWGGFSVDKATLTRFFALHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSDVDMIPFHPYYTIKDILGLVLMLMALLSLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPLASIAENHLL---KW--------MF--------MINLLLLIVPILLAVAFLTLIERKVLGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSISMFIIAPVLALTLALTMWTPLPMPHPLINLNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLLSGSFSLSTLITTQEHMWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNIFTTTLFLGAFHNPFMPELYTANFVLKSLLLTVSFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVAMPVITAGI-P-PQM--MNP-LIFATISSTIILGTLIVMTSSHWLLVWIGFEMNMLAIIPMMMKRSNPR-STEASTKYFLTQATASMLLMLAIIINLLHSGQW--TVTNILSPTASTIMTLALTMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSILYQISHSINLDILLTM-SILSILIGGWGGLNQTQLRKILAYSSIAHMGWMTAIMVYNPTMALLNLILYILMTATTFMLFMTNSSTTTLSL---SHLWNKMPLLTASILAIMLSLGGLPPLTGFLPKWMIIQELTKNDIIILPTLMAITALLNLFFYMRLTYTTSLTMFPSTNNMKIKW-QFESTKWTTYL-------SPMIILSTLTLPLAPMLSTLN---MN-FMLTLLTNTLLALLLVTIAFWLPQTNVYSEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQANNLEVMLTTALLLISLLAISLAYEWSQKG--LEWTE-MALIYTNTLLAFTISLLGLLLYRSHLMSSLLCLEGMMLSMFVMVAVMILNTHLTTSSMMPIVLLVFAACEAALGLSLLVMVSNTYGIDHVQNLNLLQCMLKIIIPTTMLIPLVWLSKHTMIWINPTVYSLMISLLSL-PMLNQFTDNSLNSS-LVFFSDSLSTPLLMLTTWLLPLMLIASQHHLANESLNQKKLFMTMLILLQVFLIMTFTATELILFYILFEATLLPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNITGTLNFLLSTYWLQPLS-PSW-----SNAFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMLLNP-ITDFMAYPFLILSLWGMIMTS--SICLRQTDVKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTILPLMTAWWLLASLTNLALPPTINLIGELFVVMSTFSWSSMSIILMGTNIVITALYSLYMLITTQRGKHTYHINNLTPSFTRENTLMTMHLMPLLLLSINPKIILGTLY------MNLFTPL-ILISLLILTIPIVTA---TLNLHKT-NAYPYYVKTT-IIWAFMISLIPTMMFIQSGQEVILMNWHWVSIQTLKISMSFKLDYFSMIFMPVALFVTWSIMEFSLWYMHLDPYIDRFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFLMAMAWFLFNTNTWDLQQIFSLNLD-NTNLPLAGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLIENNKTIQSVVLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLYNTLPFTTTALTVGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLITLIATS-LTAVYSTRIIFFALLGQPRFPTLILINENNPYLMNSIKRLLIGSIFAGFFITNTIPPMTGPQMTMPWYLKMTALAVTILGFTIATDLSLATQNLK--FKHPSASFKFSNMLGYFPTVMHRLMPKMNLSLSQKTASLLLDLTWMENALPKSISLIQMKTST--LVSSQKGQIKLYFLS---FLLTL--TLSLIML----------SLHE---- +>Lagostrophus_fasciatus_banded_hare-wallaby +----MNENLFATFVTPT-IMGVTTLPIIILFPCMLLSTPK-RWLPNRIQILQIWLIRLITKQMLTMHNKQGRTWALMLMSLILFIASTNLLGLLPYSFTPTTQLSMNIGMAIPLWLATVLMGFRNKPKVSLAHFLPQGTPTPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALSS-ISMTVSTITFTILFLLTILELAVAMIQAYVFTLLVSLYLHDNSMPQLDTSTWFLTITLMI-ISLFCVFQSKMINQLMTSIPPQDKNHTK-PKA-QLP-W-ETKWTKIYLP-HS-SPLLS---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPALSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYMLNDLWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNVVSSIGSFISLTAVILMVFIIWEAFASKREVPPVELTTTNIEWLYGCPPPYHTFEQPVFVKA----------MPYPMQLGFQDATSPIMEELTYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETIWTILPAVILVLIALPSLRILYMMDEIYNPYLTVKAMGHQWYWSYEYTDYEDLTFDSYMIPTQDLTPGQFRLLEVDNRVVLPMELPIRMLISSEDVIHAWTVPSLGLKADAIPGRLNQATLTSTRPGVYYGQCSEICGSNHSFMPIVLEMTTLKYFEKWSSMMQ----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSSFLVIIGLTCMLLTMYQWWRDIVREGTFQGHHTPVVQKGLRYGMVLFIVSEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQMIQALSITILLGLYFTILQAFEYYESSFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCLLRQFNFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MSNLRKTHPLIKIVNHSFIDLPAPSNISAWWNFGSLLGACLVIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNLHANGASMFFMCLFLHVGRGIYYGSYLYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALALVHLLFLHETGSNNPSGINPDSDKIPFHPYYTIKDALGLLLMLLALLMLALFSPDMLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLIIPLLHTSNQRSLMFRPLSQVLFWILTANLATLTWIGGQPVEQPYIIIGQLASISYFLLIVALMPLAGLFENYMLK-PKW--------MF--------IINLLLYIVPILLAVAFLTLVERKVLGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSISMFIIAPILALTLALTIWTPLPMPHSLIDLNLGLLFILSLSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKNLIITQENMWLIVSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGSFAMFFLAEYANIMVMNAMTAILFLGSSFNHNFSYLNTTSFMLKTLFLTLMFLWIRASYPRFRYDQLMYLLWKNFLPLTLALCLWFISVPIAFSCI-P-PQI--MSP-YVLLIISTSLLLGTSLTLFSNHWLMAWMGLEINTLAIIPMMTYPNHPR-STEAAIKYFLTQATASMLVMFAVIHNAWMTNQW--TLFQISDEVASTLMTLALAMKLGLAPFHFWVPEVTQGIPLTSGMILLTWQKIAPTALLYQISPTLNMKTLITL-AFLSTMLGGWGGLNQTHLRKILAYSSIAHMGWMAIIALINPNLMLLNLLIYIIATLTLFLMLNFASVTKIKSL---TNLWNKSAPMTTAILLTLLSLGGLPPLTGFMPKWLILQELVSNNNTIMATLMALSALLNLFFYMRIIYASTLTMFPTTNNSKLQW-PHPQTKTINII-------PSLTIISSLLLPLSPLFIALTY-MIN-IIVTLFVNTAISTILVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWAIQLPTPNSTLILAYCLIILLTAGLAYEWTQKG--L-----MMSINLNLIMAFSLALAGVLIYRSHLMSTLLCLEGMMLSLFILMALIISHFHMFSTSMAPLILLVFSACEAGVGLALLVKTSSNYGNDYVQNLNLLQCMLKILIPTIMLIPLTWYSKKQWVWINPTAHSLLISITSL-SLLYHHTDLGYSYN-TSFYVDSLSGPLLVLSCWLLPLMIIASQNHLMKEPLNRKKTYLTMMIILQSSLIMAFSSSELIMFYILFETTLIPTLIIITRWGNQNERLNAGLYFLFYTLVGSLPLLVALLYLHTNMGTLHILTVTMNPKTLE-PSM-----PNSILWYACMLAFMVKMPMYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGIMRITLLTQP-ITMHLSYPFIVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIIAALMQSTLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQLILPLMCTWWLLASLANLALPPTINLLGELTVIVSSFSWSHFSIILLGMNTVITALYSLHMLITSQRGKFTHHLYPIKPTFTREHILMMLHMIPLLIISTNPKFILGITY------MNFIFNSTMLLAMSTLTFPLIYN---LVFPNKT-NNFPLYCKTT-VKVAFFISLPALLLFVNTGQESIITNWQWFSIESLNMTMSFKLDYFSVIFIPIALYVTWSILEFSLWYMHSDPHIHRFFKYLITFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWFGRTDANTAALQAVLYNRIGDIGFMLTMAWLMTNNNSWDLQHIFMTNMN---TLALLGLVIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTKDNPTILTITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLLNIMPITSSALITGSLALTGTPFLAGFYSKDSIIEAMNTSYTNTWAMTITLIATM-LTAVYSLRIIYFALLNQPRFLPLSPINENHPNLINPILRLAMGSIFAGFILTTSIPPTSMVPMTMPPISKLSALAVTILGLLIAMELNAMTNKSL--MMSHIHTHNFSNMLGYYTHLFHRLYPLANLYLGQHIATMLIDLNWYEKTGPKGQANLHSTMSS-SISSTQKGLIKTYFLS---FIISI--PVIMMIV------------------ +>Capricornis_sumatraensis_Sumatran_serow +----MNENLFASFVTPM-VLGLPLVTLIVLFPSFLFPTSN-RLINNRLISLQQWALQLISKQMMNIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLALMN-ISTTAASITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKISKHNFYY-NPEL--TTKTPKQ-SNP-W-ETTWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLAVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIIALMLTTKLTHVSTMDAQEVETIWTIMPAIILITIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMILLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTNIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALTMVHLLFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGAMLLILTLMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALVPFLHTSKQRSMMFRPISQCLFWVLAADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVLMPVASTIENNLL---KW--------ML--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYLPELYTINFTIKSLLLTTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILSTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHSPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMMAILLYNPTMTLLNLVIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKAPIMTVLTLVTLMSMGGLPPLSGFMPKWMIIQEMTKNNNIILPTFMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKRMILL-------PTMTVLSTMLLPLTPILSTLN---MN-LMITLLTNFMLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLSTMLTMALLLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMMAFAMSLMGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNSTIWINPTLHSLLISFTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESLARKKLFISMLILLQLLLIMTFTATELIFFYILFEATLIPTLIIITRWGNQADRLNAGLYFLFYTLAGSLPLLVALIHIQNTIGSLNFLILQYWVQPMP-NSW-----SNTFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-MTDFMSYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVMMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMALHMLPLLLLSLNPKVILGPLY------MNLLSSF-TLTTSILLITPIMAT---SLNTYKS-SNYPLYVKTT-VSYAFITSMIPTMMFIHTGQETVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPKINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLKPD-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFTLLGQPRFPTLITINENNPLLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPYYLKMTALAITALGFILALEISNMTHTLK--FSYPSNIFKFSNLLGYYPAIMHRLAPYTNLTMSQKSASSLLDLIWLETILPKTISTTQMKMST--MVTNQKGLIKLYFLS---FLITI--LTSMILF----------NFHE---- +>Capricornis_swinhoei_ +----MNENLFASFVTPM-VLGLPLVTLIVLFPSFLFPTSN-RLINNRLISLQQWALQLISKQMMNIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIYLIGGATLALMN-ISTTAASITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTTILSMF-LTLFIIFQLKISKHNFYY-NPELT-TTKTPKQ-SNP-W-ETTWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLAVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIIALMLTTKLTHVSTMDAQEVETIWTIMPAIILITIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMILLALGLTTNMLTMYQWWRDVIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWG---MTNIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGAMLLILTLMLLVLFMPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALVPLLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVLMPVASTIENNLL---KW--------ML--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYLPELYTINFTIKSLLLTTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILSTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHSPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPTSALYQILPSINLNLILTL-SILSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMMAVLLYNPTMTLLNLVIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKAPIMTVLTLVTLMSMGGLPPLSGFMPKWMIIQEMTKNNNIILPTFMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKRMILL-------PTMTVLSTMLLPLTPILSTLN---MN-LMITLLTNFMLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFAMSLMGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNSTVWINPTLHSLLISFTSL-LLMNQFGDNSLNFS-LNFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESLARKKLFISMLILLQLLLIMTFTATELIFFYILFEATLIPTLIIITRWGNQADRLNAGLYFLFYTLAGSLPLLVALIHIQNTIGSLNFLVLQYWVQPMS-NSW-----SNTFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRVTPFLNP-ITDSMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLC------MNLLSSF-TLMTLILLIAPIMAT---SLNTYKS-SNYPLYVKTT-VSYAFITSMIPTMTFIHTGQETVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHPDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLKPD-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLLKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATA-FTAIYSTRIIFFTLLGQPRFPTLININENNPLLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPYYLKMTALAITALGFILALEISNMTHTLK--FSYPSNTFKFSNLLGYYPTIMHRLAPFTNLTMSQKSASSLLDLIWLETVLPKTISTAQMKMST--VVTNQKGLIKLYFLS---FLITI--LTSMILF----------NFHE---- +>Tarsipes_rostratus_honey_possum +----MNENLFAPFITPT-IMGITTLPIIMTFPCLMLSSPK-RWLPNRIQVLQIWLIRLITKQMMAMHNIQGRSWTLMLMSLILFIGSTNLLGLLPYSFTPTTQLSMNIGMAIPLWMGTVVMGFRNKPKASLAHFLPQGTPTPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALSS-ISMTVSMITFSILLLLTILELAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFLTIILMV-ISLFCIYQLKMLNQPMNSITPTSEKEMCTTPT-TQPHW-NSKWTKIYLP-HS-SPLRS---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLIGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLPGGNIKWAPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYMLNDLWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNVLSSIGSFISLTAVILMMFIIWEAFAAKREVSTVELTTTNIEWLYGCPPPYHTFEQPVFVKL----------MPYPMQFGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETIWTIMPAVILVLIALPSLRILYMMDEIYNPYLTAKAMGHQWYWSYEYTDYEDLMFDSYMIPTQDLTPGQFRLLEVDNRVVLPMELPIRMLISSEDVLHAWAVPSLGLKTDAIPGRLNQATLTSTRPGVYYGQCSEICGSNHSFMPIVLEMTTLKYFEKWSSMMQ----------MSHQTHAYHLGYPSPWPLTGALSALLFTSGMTMWFHFNSISLLIIGITCLLLTMYQWWRDIVREGTFQGHHTPVVQKGLRYGMILFILSEVFFFVGFFWAFYHSSLAPTPELGGCWPPVGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQMIQALSITIILGIYFTALQAMEYYETPFTIADGIYGSTFFMATGFHGLHVIIGTTFLIVCLIRQINFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIINHSFIDLPAPSNISAWWNFGSLLGVCLTIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNLHANGASMFFMCLFLHVGRGIYYGSYLYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIMAMVIVHLLFLHETGSNNPTGIDPNSDKIPFHPYYTIKDILGLMFMLLTLLLLALFSPDMLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLLIIPLLHTSNQRSLIFRPISQMLFWMLTANLFILTWIGGQPVEQPYIIIGQLASIMYFLLIIILIPAASILENYLLN-PK---------MY--------VINLLLYIVPILLAVAFLTLVERKVLGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSISMFVIAPILALTLALTIWTPLPMPNVLLDLNLGLLFILALSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKTLIVTQENLWLIISTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIMIMNAMTAILFLGSSAYHNMQTFSTISFMTKTLALTILFLWIRASYPRFRYDQLMHLLWKSFLPMTLALCLWFISFPIAFSCI-P-PQF--MSP-LIMLIISISMLLGTSMTMFSSHWLTAWMGLEINTLAIIPLLTLPNHPR-ATESAIKYFLTQATASMVMMFAIIHNASMTNQW--TLLQISNPTASTLMTLALATKLGLAPFHFWVPEVAQGIPLFSGMILLTWQKIAPTSIMYQISPTLNMNILILL-AIMSTLLGGWGGLNQTQLRKIMAYSSIAHMGWMTIIILINPIMTLLNLILYIIATLALFLTLNHASVTKIKSI---SNLWNKSTPLTIIIFLSLLSLGGLPPLTGFMPKWMILQELINSNNITIATLMALSALLNLFFYMRIIYAATLTMFPSTSTTKLQW-LIPQNKPVHTI-------PSLTIITTLLLPLSPIFMSLY--MIN-LIITLIINTALSTVLVMIAFWLPQLYLYLEKSTPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQLSSPSSMLALSYCLILLLTAGLAYEWTQKG--LEWTE-MTPLNINLTMAFFLALAGVLIYRSHLMSTLLCLEGMMLSLFILLSLLISHFHMLSSSMAPLILLVFSACEAGVGLALLVKMSSNYGNDYVQNLNLLQCMLKILIPTFMLIPLTWCSKKQWVWIHPTTHSLLISLISL-SFLFHYSDLGLNYN-SSFSMDSLSSPLLVLSCWLLPLMMIASQNHLTNETLNRKKTYLTMLIILQLFLIMAFTASEMIMFYILFEATLIPTLIIITRWGNQNERLNAGLYFLFYTLAGSLPLLVALLYMYNKLGSLHILLMSMYSPTLY-PST-----SNSFLWYACMTAFMVKMPMYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITIFTNP-ITSHIYYPFMILSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMGLVIIASLMQSTLSFMGATTLMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQMILPLMCSWWLLASLANLALPPSINLLGELAVIISSFSWSNLSIILLGVNTVITAIYSLHMLITSQRGKFTHHLYPLKPSFTREHILMTLHLVPLLIISVNPKFILGTTF------MNSLFNTTMMLSISLLTLPLLLN---LLFPNIT-HQFPSYCKTS-VKSAFMISLMPLTIFLYSGQESIITNWQWFSINSFNISMNFKMDYFSIIFIPIALYVTWSILEFSMWYMHSDPNMHRFFKYLITFLLTMIILVSANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDIGFMLTMAWLMLNNNSWDLQHIFMTPMN---SLALLGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMLSNNNLIMTLILCLGALTTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLLMILPITSSALMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALCITLIATT-MTAIYSMRIVYFALLKEPRFPPLSPINENNPSLINPIMRLAMGSIFAGFILTTNIPPTSLIPMTMPAMTKMSALIITLLGILIGMELNSFTNKSP--MMSLIHTHHFSNMLGYYPHLFHRIYPLANLLLGQRIATMLIDLNWYEKTGPKGQANLHNSTSA-WITSAQKGLIKMYFLS---FIISV--PIILLII------------------ +>Allenopithecus_nigroviridis_Allens_swamp_monkey +----MNENLLTPFTAPT-ILNQPATIPIILFPMLLIPTSN-HLINNRLITIQHNLIQLTLKQMMMIHNVKGKTWSLMLTSLIIFITTTNLLGLLPHSFTPTAQLSMNLAMAIPLWAGTVITGLRFKTKSSLAHLLPQGTPMPLIPMLVVIETISLLIQPLALAVRLTANITAGHLLMHLVGSAVMVLST-INFPTTLLIFMLLTLLTILEIAVALIQAYVFTLLISLYLHNNTMPQLDTSTWFITIMTML-PTLYLIMQLKLLNTNYYQ-RPLQK-SPNKQTS-NNY-W-QLKWTKIYLP-RL-QLRQF---MFVNRWLFSTNHKDIGTLYLLFGAWAGIMGTALSLLIRAELGQPGNLLGSDHLYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTVVEAGAGTGWTVYPPLAGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPTGGGDPILYQHLFWFFGHPEVYILILPGFGMVSHIVTYYSGKKEPFGYMGMVWAMMSIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSAAMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDQTYTKAHFIVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTLSSMGSFISLVAVILMIYMIWEAFASKRKVLMIEQPFTNLEWLNGCPPPYHTFEEPVYIKL-NEKGESRTPMAHSAQLGLQDATSPIMEELITFHDYAFMTISLISFLILYALFSTLTTKLTNTNITNAQEMETIWTILPAIILVLIALPSLRILYMMDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTMFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQFHAYHMVKPSPWPLTGALSAFLMTSGLTTWFHFHSATLLMLGLLTTLLTLYQWWRDIVRESTYQGHHTTPVQKGLRYGMMLFIISETFFFIGFFWAFYHSSLAPTPHLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLLYGNRMQTTQALSLTILLGTYFTLLQISEYFEAPFTISDGIYGSTFFVTTGFHGLHVIIGSTFLFVCLIRQLSYHFTSNHHFGFEAATWYWHFVDVIWLLLYISIYWWGS--MIPMRKSNPIMKMINRSFIDLPTPSNISMWWNFGSLLASCLILQIVTGLLLAMHYAPNTSSAFSSIAYITRDVNYGWVIRYLHANGASVFFICLFLHMGRGLYYGSFLLLKTWNTGIMLLLMTMATAFMGYVLPWGQMSFWGATVITNLLSATPYIGTDLVQWVWGGYSIDNPTLMRFFTLHFILPFIIATLTIVHLLFLHETGSNNPCGIPSDSDKIAFHPYYTIKDILGLTLLLLILMTLTLLSPDLLNDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIIPLLHKSKQQSMMFRPLSQFLFWFLATTLLTLTWIGSQPMNQPFIIIGQMASMMYFITILILMPLASLIENYLL---KWT-------MT--------TMNLLLLIMSTLAATAFLTLVERKLLGCMQLRKGPNIVGPCGLLQPFADAVKLFTKEPLKPSTSTTLLYTIAPALAFSIALLLWTPLPMPNPLINLNLGLLFILATSSLITYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSILLMSGSFNLNMLITTQEHLWLLLPSWPLAMMWFTSTLAETNRSPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIMMMNALTTTIFLSTPYPTHSPELFTMCFVIKTLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLTFLMWNISMPITISGI-P-PQT--MNP-LAQLIIYTTTITGTLITLLSSHWFLTWTGLEMNMLAFTPILMKKMNPR-STEAATKYFLTQSTASMILMAAIISNSLLSGHW--TIMSNTNQFPSLMMTTALSMKLGMAPFHFWVPEVTQGTSLTSGLLLLTWQKLAPISIMYQIHPSINTHILLTL-STLSIMVGGWGGFNQTQLRKIMGYSSITHTGWMMMTLVYNPTITIFYLTMYITLTTTMFLILNLNSNTTILTL---SLTWNKSTQLVPLMTTTLLSLGGLPPLSGFLPKWITIQELTMNNNFIIPFTMMTMTLLNLHFYMRLIYAVSMTLFPTSNNTKMNW-QFENTKPTFPI-------PPLIVISTLLLPISPLILTIP---MN-LVLALTINTLLTLLLMIIMFWLPQLNSYMEKTNPYECGFDPLNPARIPFSMKFFLTAITFLLFDLEIALLLSLPWALQTTNLPTMIKSSITLIIILALSLAYEWTQKG--LDWTE-MSPIFMNIMLAFTISLLGMLVYRSHLMASLLCLEGMMMSLFIMTALMALNTQHSLANIMPIILLVFAACETAVGLALLISISNTYGLDYIHNLSLLQCMLKMVIPTIMLLPVTWFSKNNTIWINLTMHSLIISLIPL-LFFNQTDNNLISYS-IHLSSDPLTTPLLMLTAWLLPLMIMASQHHLYDEPPLQKKLYLSMMVFLQIILILTFMATELILFYILFETTLIPTLVIITKWGNQMERLNASTYFLFYTLTGSLPLLIMLIYTYNSTGSLNIMLLTLMNQKLT-PTW-----SHNLTWLACMMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLAGYGMMRLTSILNP-LTEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMSLVIMASLIQTPWSFSGATILMIAHGLTSSMLFCLANSNYERTHSRIMMLSRGLQTLFPLMASWWFMANLTNLALPPTINLVGELFVITASFSWSHITIALTGLNMLITTLYSLHMFVTVQRGKLTHHTTNMKPSFTRENTLMFMHLAPITLLTLNPNIILGFTS------MTMYTSI-MMTTLVSLTLPIVTA---LINPNKK-QSYPNYVKMT-MMYTFIISLLPMTLHIYLNQETTIWSWHWMVTQTLDLTLSFKLDYFSTMFIPITLFITWSIMEFSLWYMSSDPNINQFFKYLLIFLVAMLVLTTANNLFQLFIGWEGVGIMSFLLISWWYSRTDANTAAIQAVLYNRIGDIGFILAMAWFLLHNNSWDIQQMLTLDSN-SNFLPLMGLLLAAMGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVYLLIRFHPLMENNTLIQSFTLCLGAITTMFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLSKTMPLTSTSLFIGNLALTGMPFLTGFYSKDLIIEATNTSYTNAWALSITLIATS-LTSAYSARTILLTLTGPPRFSALVSINENNPTLLNPIKRLTLGSIITGFLITNNISPTSLPQPTMPHYLKLSTLCATILGLLAALDLAFMTNKLK--MNNPSQMFKFSNMLGYFPTTIHRMISYQSLLMSQNLASLLLDSLWLEKATPKMITDAHTAASM--TITTQKGMIKLYSLS---FLISL--MLILLLTM----------------- +>Sus_scrofa_taiwanensis_Taiwan_pig +----MNENLFASFIAPT-MMGLPIVTLIIMFPSLLFPTPK-RLINNRTISIQQWLIQLTSKQMMAIHNQKGQTWSLMLMSLIMFIGSTNILGLLPHSFTPTTQLSMNLGMAIPLWSATVFTGFRHKTKTSLAHFLPQGTPAPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALLN-ISTMTAFITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITITSMI-MTLFILFQLKISNYSYPA-SPEST-ELKTQKH-STP-W-EMKWTKIYLP-LS-LPLR----MFVNRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQAWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSAVELTSTNLEWLHGCPPPYHTFEEPTYINL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGEMRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSTSMLTG--------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMLLLSLGLLTNTLTMYQWWRDIIRESTFQGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGDRKHMIQALSITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIINNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFICLFIHVGRGLYYGSYMFLETWNIGVVLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAAVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGALFMMLILLILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVASILILILMPMLHTSKQRSMMFRPLSQCLFWMLVADLITLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPITSIIENNLL---KW--------MF--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADALKLFTKEPLRPATSSISMFIIAPILALSLALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLITTQEHIWMIFTSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFMAEYANIIMMNAFTAILFLGAFHDPHTSELYTINFVLKTLALTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHISLPIMTASI-P-PQS--MNP-IIYTTLIMTVMSGTMLVMISSHWLLIWIGFEMNLLAMIPVLMKNFNPR-ATEAATKYFLTQATASMMLMMAIIINLLYSGQW--TITKMFNPVAMTMMTLALAMKLGLSPFHFWVPEVTQGISLQAGLLLLTWQKLAPLSVLCQISQSINPNLMLTM-AMLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNTTMTILNLLIYITTTLAMFMLLIHSSATTTLSL---SHTWNKMPIITSLMMVTLLSMGGLPPLSGFMPKWMIIQEMTKNESIIMPTLMAMTALLNLYFYMRLAYSSSLTMFPSTNNMKMKW-QFEHTKQMKLL-------PTMIVLSTLILPMTPALSSLN---MN-IMLTLFTNVTLASLLVLIAFWLPQLNTYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLKTMLTMALFLLTLLAASLAYEWTQKG--LEWTE-MPLVYMNIIMAFTIALAGLLMYRSHLMSSLLCLEGMMLSLFIMSTLIVLNTHFTLANMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTTMLLPMTWMSKHNMIWINATVHSLLISLISL-SLLNQLGENSLNFS-LTFFSDSLSAPLLVLTTWLLPLMLMASQSHLSKETTTRKKLYITMLILLQLFLIMTFTATELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYIQNTTGSLNFLIIHYWSHPLS-NSW-----SNIFMWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTILNP-LTNYMAYPFLMLSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERVHSRTMILARGLQTLLPLMATWWLMASLTNLALPPSINLIGELFIITASFSWSNITIILMGMNMMITALYSLYMLIITQRGKYTHHINNIKPSFTRENALMALHILPLLLLTLNPKMILGPLY------MNPFASL-TLTTLTILTIPIMMS---NSNIYKT-NLYPNYVKTT-MSYAFTLSLVPLLMFMHTGQEMIISNWHWMTLQTVELSLSFKMDYFSVMFIPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFVLSMAWFLTHSNAWDFQQIFMLNNK-CPNMPLIGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMETNKLVQTMTLCLGAITTLFTALCAITQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICMHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKAMPFTTTALIIGSLALTGMPYLTGFYSKDLIIEAANMSYTNAWALLMTLIATS-LTAAYSTRIIFFAFLGQPRFPPLVLINENNPLLINSIKRLLIGSIFAGFIISNNIPPMTVPNTTMPLYMKMTALIVTIMGFMLALELNNTTYYLK--FKYPSQTYKFSNMLGYYPSIMHRLPTYHNLSMSQKSASSLLDLIWLETILPKTTSFIQMKMSI--MVSNQKGLIKLYFLS---FLITI--MISMMLF----------NYHE---- +>Rattus_tunneyi_Tunneys_rat +----MNENLFASFITPT-VMGLPIVVTIIMFPSILFPSSE-RLISNRLHSFQHWLIKLIIKQMMLIHTPKGRTWALMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVILGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTMLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSSM-ITLFILFQLKISSQTFSP-APSPK-IMTTEKT-NNP-W-ELKWTKIYLP-LS-LPQQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLNDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLVMIFMIWEAFASKREVLSVSYSSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHYNSTILLSLGLLTNVLTMYQWWRDIIREGTFQGHHTPIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLVPTHDLGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMNQALLITILLGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIICLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLLKIINHSFIDLPAPSNISSWWNFGSLLGVCLMIQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYLHANGASLFFICLYLHVGRGMYYGSYTFLETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLDSNADKIPFHPYYTIKDLLGVFMLFLFLMILVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAFLPLLHTSKQRSLTFRPITQTLYWILVANLFILTWIGGQPVEHPFTIIGQLASISYFSIILVLMPLSGIIEDKML---KWD-------MY--------FINILTLLVPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPTLSLSLALSLWIPLPMPHPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMNGSFSLQMLITTQEHIWLLIPAWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTSIVFLGPLYYINYPELYSINFMTETLLLSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPIFLAGI-P-PYT--MNP-ITLIIIYFTIFMGPAITMSSSNLLLMWVGLEVSLLAIIPLLTNKKSPR-STEAATKYFLTQATASMIMLLAIVLNFKQSGMW--MFQQQTNNTLLNMMLISLAMKLGLAPFHYWLPEVTQGIPMHIGLILLTWQKIAPLSILYQIYQLLNPTITTIL-AIASVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLMIYILLTIPMFISLMTNSATTINSF---SLAWNKTPMILAMTSIILLSMGGLPPLTGFLPKWAIISELLKNNCSILPTLMAMMALLNLFFYTRLIYSMSLTMFPTNNNSKMIS-HHTNLKHNLIL-------PTLTVLSTLTLPLSPQLIT-----MN-LFIIIMINITLSFILIMIAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAVQTTSTTTMTTTAFILITILALGLSYEWTQKG--LEWTE-MTSAFLNLTLAFTLSLLGTLMFRSHLMSTLLCLEGMMLSLFIMTSTSTLNSNSMASMTIPITILVFAACEAAVGLALLAKISNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLTWLSTNKNIWTNITSYSFLVSLLSL-SLLWQNDENYLNFS-ITFSSDPLSTPLIILTTWLLPLMVLASQNHMKKETLTHQKLYISMLISLQILLTMTFSTTELILFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALLSIQNSMGTLNFLILSLTAQSLS-STW-----SNNIMWLACMMAFMVKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRVSIILDP-LTKSLAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAIMIQTPWSFMGATMLMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMIFPLMATWWLLASLANLALPPLINLMGELFIVMATFSWSNTSIILTATNIVITGMYSMYMIITTQRGKLTSHMNNLQPSHTRELTLMTLHIIPLMLLTINPKLITGLTL------MNMMTSA-ILMILILLTAPIIIS---MTNLPKL-IDFPSYATSS-IKFSFFLSLLPLLLFFHYNTEYMITNWHWLTINSIKLSMSFKIDYFSILFLSVALFVTWSIMQFSSWYMHSDPHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRVGDIGFILAMTWFCLNMNSWELQQIFLT-NN-SNLVPLMGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFHPLTSNNSTIMTAMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGSMMKVMPFTSSCLIIGSLALTGMPFLTGFYSKDLIIEAINTCNANAWALMITLIATS-MTAMYSMRIIYFVTMTKPRYSPLITINENNPNLINPIKRLALGSIAAGFLISLNIPPTNIQVLTMPWYLKMTALFITILGFAIALELNNLTLNLSS-TNKATRPSLFSTSLGYYPSIMHRTVPQKTLDSSYKMSLNLLDLIWLEKTIPKSTSITHTHLSK--MMANQKGLVKLYFLS---FLITI--SLIFILHTL---------SPEWFQ- +>Rattus_sordidus_Australian_dusky_field_rat +----MNENLFASFITPT-VMGLPIVVTIIMFPSILFPSSE-RLISNRLHSFQHWLIKLIIKQMMLIHTPKGRTWALMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVILGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTMLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISSM-ITLFILFQLKISSQTFPA-APSPK-IMTTKKT-NNP-W-ELKWTKIYLP-LS-LPQQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVLVMIFMIWEAFASKREVLSVSYSSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI----------MAHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHYNSTILLSLGLLTNILTMYQWWRDIIREGTFQGHHTPIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLVPTHDLGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMNQALLITILLGLYFTILQASEYYETPFSISDGIYGSTFFMATGFHGLHVIIGSTFLIICLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLLKIINHSFIDLPAPSNISSWWNFGSLLGVCLMIQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYLHANGASTFFICLYLHVGRGMYYGSYTFLETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLNSNSDKIPFHPYYTIKDLLGVFMLLLFLMTLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAFLPLLHTSKQRSLTFRPITQALYWILAANLLILTWIGGQPVEHPFIIIGQLASISYFSIILVLMPISGIIEDKML---KWN-------MY--------FINILTLLVPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFTKEPMRPLTTSMSLFIIAPTLSLTLALSLWIPLPMPHPLINLNLGMLFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQMLITTQEHIWLLIPAWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTSIVFLGPLYYINHPELYSINFMTETLLLSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWYISFPIFLAGI-P-PYT--MNP-ITLIIIYFTILMGPAITMSSSNLLLMWVGLEVSLLAIVPLLTNKKTPR-STEAATKYFLTQATASMIMLLAIILNYKQSGMW--MFQQQTNSMLLNMTLISLAMKLGLAPFHYWLPEVTQGVPMHIGLILLTWQKIAPLSILYQIYQLLNPTITTIL-AITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLAIYILLTIPMFISLMTNSATTINSF---SLAWNKTPMILTMASIILLSMGGLPPLTGFLPKWAIISELLKNDCSILPTLMAIMALLNLFFYTRLIYSVSLTMFPTNNNSKMTS-HHTNLKYNPIL-------PTLTVLSTLTLPLSSQLMT-----MN-LFIIIMINITLSFILITIAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAVQTTNITTMTTTAFILITILALGLSYEWTQKG--LEWTE-MTSAFLNLILAFTLSLLGTLMFRSHLMSTLLCLEGMMLSLFIMTSTSTLNSNSMASMTIPITILVFAACEAAVGLALLAKISNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLTWLSTNKKVWTNVTSYSFLVSLMSL-SLLWQNDENYLNFS-IMFSSDPLSTPLIILTTWLLPLMILASQNHMKKETLTHQKLYISMLISLQILLIMTFSTTELILFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALLSIQNSMGTLNFLILSLTTQPLS-PTW-----SNSIMWLACMMAFMVKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRVSIILDP-LTKSLAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAIMIQTPWSFMGATMLMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMVFPLMATWWLLASLANLALPPLINLMGELFIVMATFSWSNPSIILTATNIIITGMYSMYMIITTQRGKLTSHMNNLQPSHTRELTLMTLHIIPLMLLTINPKLITGLTM------MNMMTSA-ILMILILLTAPIIIS---MTNLPKL-IDFPSYATSS-IKFSFFLSLLPLLLFFHYNTEYMITNWHWLTINSIKLSMSFKIDYFSILFLSVALFVTWSIMQFSSWYMHSDPHINRFIKYLMLFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRVGDIGFILAMTWFCLNMNSWELQQIFLT-NN-SNLVPLTGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFHPLTSNNSTIMTAMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGSMMKVMPFTSSCLIIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALMITLIATS-MTAMYSMRIIYFVTMTKPRYSPLITINEDNPNLINPIKRLALGSIMAGFLISLNIPPTNIQVLTMPWYLKTTALFITIMGFAIALELNNLTLNLSS-TNKATRPSLFSTSLGYFPSIMHRTIPQKTLNSSYKMSLNLLDLIWLEKTIPKSTSITHTHLSK--MMANQKGLIKLYFLS---FLITI--SLIFTLHTL---------NPEWFQ- +>Vampyrum_spectrum_ +----MNENLFASFATPT-MMGLPIVILVIMFPALMFPSTN-RLVNNRLVAIQQWLIRLTSKQMLSIHNSKGQAWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLVGGATLALMD-INATVALLPFTVLVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTILGTI-LTLFTVIQLKISSHHFYS-NPEPK-ATESIKP-HTP-W-ETKWTKIYLP-LS-LPLR----MFISRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGVGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNTTWAKIHFLVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFMVWEAFAAKREVSSTELTVTNLEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGLQDATSPIMEELLYFHDHTLMIVFMISSLVLYLISSMLTTRLTHTSTMDAQEVETIWTILPALILITIALPSLRILYMMDEINNPSMTVKTMGHQWYWSYEYTDYADLRFDSYMTPTSYLKMGDLRLLEVDNRVVLPMETTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVTLPYFEKWSASML----------MAHQAHAYHMVNPSPWPLTGALSALLLTSGLAMWFHFNSMILLTLGLITNTLTMYQWWRDVIREGTFQGHHTPVVQKGLRYGMVLFIISEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLNPLDVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQALSITISLGLYFTLLQASEYYEAPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIICLLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIINHSLVDLPAPSNLSSWWNFGSLLGICLAVQILTGLFLAMHYTSDTATAFNSVTHICRDVHYGWILRYLHANGASMFFICLYLHIGRGLYYGSYMYSETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFLLPFLVSALVMVHLLFLHETGSNNPMGIPSDSDMIPFHPYYTIKDILGLLAMLTALSTLVLFSPDLLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLAIIPLLHTSKQRSMTFRPLSQCLFWLLTAVLLTLTWIGGQPVEHPYIIIGQTASILYFLILLVFMPLVSTVENHLL---KW--------MF--------LTNLLSMIIPVLLAVAFLTLVERKILGYMQLRKGPNTVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFIIAPILALTLALTMWVPLPMPHPLVNMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYSLATLITTQEYLWLIIPSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTTTLFLGAYNNPILPELHTMNFATKTLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHITVPVSMAGI-P-PQT--MNP-LTLSMIISTIMLGTTIVMTSSHWLTIWIGFEMNMLAIIPMLMKTHHPR-STEAAAKYFLIQATASMLLLLAVTTNLLKSGQW--TVTNMMDPLALTILTLSLAMKLGLSPFHFWVPEVTQGIPLLSGLILLTWQKLAPLSILYIMAPTIDPTLILTM-SILSVLVGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLTYNPSMTLLNLVIYIMMTSTTFMLLINSSTTTTLSL---SLTWNKTPLIAIIILTIMLSLGGLPPLTGFMPKWMILQELTKNDSIILPLLMATAALLNLYFYMRLTYTTSLTMLPTMNTIKTNW-HFKHTKQATLL-------SPLIIISTMTLPLTPTMSTLL---MN-MLITLLTNTTLASLLVMIAFWLPQTSAYSEKLSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNLHIMLPMALTLTSLLAISLAYEWTQEG--LEWSE-MTLTYVNTFLAFTISLMGMLMYRSHMMSSLLCLEGMMLSLFVILTMTILNNHLTLASMLPIILLVFAACEAALGLSLLVMVSTTYGTDYVQNLNLLQCMLKIITPTIMLIPLTWASKPKMVWINTTMHSLIISLLWL-PLTNQPLDNSLNLS-TTFFSDPLSTPLLMLTLWLPPPMIIASQSHLSHESPTRKKLYLTMLILLQAFLIMTFTVTELILFYILFEATLLPTLIIITRWGNQAERLNAGLYFLFYTLVGSLPLLIALIHIQNLTGSLNFLLMQHLLDPLP-ISW-----STTLMWVACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITILLNP-LTEFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVSIQSPWSFMGATALMVAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELLVTVSAFSWSNLSIILLGLNIIITALYSLYMLITTQRGIPTHHINNIPPSFTRENTLMTMHILPLLLLSLSPKIILGTPY------MNLTPYL-TLLSLTILTIPILTT---NPTTRNN-PNYPYYVKTA-VLYSFLVSTVPTAIFIYTNQESMISNWHWVSIQTLKLSLSFKMDFFSLLFMPVALFVTWSILEFSMWYMHSDPNVNQFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAILYNRIGDIGFILSMAWFLINSNTWELQQIFVLTPN-TPILPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLLESNSNIQTMILCLGAITTLFTATCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLSDEQDIRKMGGLFKTMPFTTTAMTVGSLALTGTPFLTGFYSKDLIIEAANTSYTNAWALLLTLIATT-LTAIYSTRIIFFALLGQPRLPTTILINENNPLLLNAIKRLLIGSIFAGFLISKNIPPMTIPPMTMPPYLKLTALTVTLMGFILALELNLMALNLK--PKTPSYPLKFSTLLGYFPTIIHRLPPMTNLMFSQKSASSLLDLIWLESILPKTVSLAQLKAST--LVSSQKGLIKLYFLS---FLVTF--LLTLPTL----------ILPV---- +>Mus_caroli_Ryukyu_mouse +----MNENLFASFITPT-VMGLPVVVTIIMFPSILFPSSK-RLINNRLHSFQHWLIKLIIKQMMLIHTPKGRTWALMIISLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVIMGFRHKLKSSLAHFLPQGTPITLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISSM-ITLFILFQLKISSQIFPL-PPSPK-SLTTMKV-KNP-W-ESKWTKIYLP-HS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLVMIFMIWEAFASKREVSSVSYASTNLEWLHGCPPPYHTFEEPTYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMVPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHFNSITLLTLGLLTNILTMYQWWRDVIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGIFPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITIMLGLYFTVLQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIICLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLFKIINHSFVDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGIYYGSYAFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILIMFLFLMTLVLFFPDMLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQRSLMFRPITQILYWVLVANLLILTWIGGQPVEHPFIIIGQLASISYFTIILILMPISGIIEDKML---KLHP------MY--------FINILTLLVPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSISLFIIAPTLSLTLALSLWVPLPMPHPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSYSLQTLITTQEHLWLIIPAWPMAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTTVIFLGPLHYINIPELYSINFMTEALLLSSAFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIFLAGT-P-PLM--MNP-ITLIIIYSTIFLGPVITMSSTNLLLMWVGLEFSLLSIIPLLINKKNPR-STEAATKYFVTQATASMIILLAIVLNYKQLGTW--MFQQQTSSLILNMSLMALSMKLGLAPFHFWLPEVTQGIPLHTGLILLTWQKIAPLSILIQIFHLLDSTIILLM-AISSIFLGAWGGLNQTQTRKIMAYSSIAHMGWMLAILPYNPSLTLLNLAIYILLTIPMFMALMLNNSMNINSI---SLLWNKTPAVLTMISLILLSLGGLPPLTGFLPKWIIITELMKNNCLILATLMAMMALLNLFFYTRLIYSTSLTMFPTNNNSKMMS-FQPKFKSYLTL-------SIMTILSTMTLPLSPQLIM-----MN-LFIVIFINTLLSLALISIAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTTNTTIMMTMAFILVTILSLGLMYEWLQKG--LEWTE-MTSAFFNLTLSFTLSLLGTLMFRSHLMSTLLCLEGMMLSLFIMTSMTTLNSNSMSSMPIPITILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIIFPSFMLLPLVWLSNPKKTWMNTTSYSFMVSLISL-TLLWQTDENYQNFS-NMFSSDPLSTPLIILTTWLLPLMLMASQNHLKKENPLLQKLYISLLVSLQILLIMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALILIQNYIGTLNFTILLLTTHTMD-NSW-----SNSLLWLACMMAFLIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGSYGMIRISVILDP-LTKYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSFMGATMLMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMSTCWLLASLANLALPPSINLMGELFITISLFSWSNFSIILMGTNIIITGMYSMYMVITTQRGKLTSHMINLQPTHTRESTLMALHLIPLILLTVSPKLITGLTM------MNIFTTS-ILLIFILLLSPIFIS---MLNLTKH-INFPLYTTTS-IKFSFILSLFPLLLFLYNNMEYMITTWQWITMNSMKLTMSFKIDYFSILFMSVALFVTWSIMQFSSWYMHSDPHINRFIKYLTLFLITMLILTSANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMTWFSLNMNSWEFQQIMLS-NN-DNLIPLTGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTSNNDNIMTIMLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGMNQPYLAFLHICTHAFFKAMLFMCSGSIIHSLADEQDIRKMGNMMKTMPFTSSCMIIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALLITLIATS-MTAMYSMRIIYFVTMTKPRYPPLISINENDPDLINPIKRLALGSIFAGFIISYNIPPTNIQTLTMPWFLKTTALIISVLGFLIALELNNLTMKFS--TNKSNSFSSFSTLLGYFPPIMHRIMPMKSLNISLKTSLTLLDLIWLEKLIPKSTSTIHTSMTT--LTTNQKGLIKLYFMS---FLVSM--ILIIIIYMI---------NPEWSQ- +>Damaliscus_lunatus_topi +----MNENLFASFITPM-MLGLPIVTLIVLFPSLLFPTSN-RLINNRLISLQQWMLQLVSKQMMSIHNTKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILILLTVLEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LALFIIFQLKISKHNFYH-NPELA-PTKTLKQ-NTP-W-EMKWTKICLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDIIRESTFQGHHTSAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGMCLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHMGRGLYYGSYIFLETWNVGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDALGALLLILALTLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPMAGTIENNLL---KW--------MF--------MLNILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPCMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSGI-P-PQT--MNP-IIFIIILMTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGISLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SMLSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKAPVMTALVLVTLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKKMTLL-------PTMIVMSSMLLPLTPILSVLE---MN-LMMALLTNLTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLTTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKSNMIWINPTLHSLLISLTSL-LLMNQFGDSSLNFS-LTFFSDPLSMPLLILTMWLLPLMLMASQHHLSKENLVRKKLFISMLILLQLFLIMTFTAAELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYIQNMMGSLNFLILQYWVQPMV-NSW-----SNVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTDFMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMVAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMSTFSWSNTTIILMGVNMVITALYSLYMLITTQRGKYTHHINNISPSFTRESALMSLHILPLLLLSLNPKIILGTLY--------MFSSL-TLTTLLLLTIPIAMT---TSNAYKT-PNYPHYVKTT-VSYAFITSMVPTMMFIHTGQETIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLVTMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTSLNTWDLQQIFVLESA-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNMFAQSIMLCLGAITTLFTALCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALLMTLVATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFILSNSIPPMTVPQMTMPHYLKMTALAVTILGFILALEISNMTYNLK--FNYPSNPFKFSNQLGYYPTIMHRLTPHMNLTMSQKSASSLLDLIWLENILPKTTSLIQMKAST--TITNQKGLIKLYFLS---FLITI--LISMTLL----------NFHE---- +>Procapra_gutturosa_ +----MNENLFASFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLMNNRLISLQQWVLQLVSKQMMNIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTAFITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKISKYNFYH-HPELT-STKMPKQ-NTP-W-ETKWTKIYLP-HS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTILLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNQMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNVGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALATVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGGLLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPVASTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIILSSI-P-PQT--MNP-IVFTTILMTVLFGTMIVMISSHWLLIWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLIIYIIMTSTMFSLFMANSTTTTLSL---SNTWNKTPIMTVLVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPITKQMTLL-------PTMVVLSTMLLPLTPILSILD---MN-LMLALLTNFALATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLAASLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLAGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLALLVMVSNTYGTDYVQNLNLLQCMLKYIVPTMMLMPLTWLSKNNMIWINSTTHSLLISLTSL-LLMNQFGDNSLNFS-LIFFSDSLSMPLLILTMWLLPLMLMASQHHLSKENLIRKKLFITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTTGSLNFLMLQYWVQPMS-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTEFMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSL-ALTTLFLLTLPIMMT---SSHIYKT-SNYPLYVKTT-ISCAFLTSMVPTMMFIYTGHEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSLWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPD-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLVATS-FTAIYSTRIIFFALLGQPRFSTLITINENNPSLINSIKRLLIGSLFAGFIISNNIPPMTVPQMTMPYYLKMMAMAVTILGFILALEISNITYNLK--FTYPSNIFKFSNLLGYYPTIIHRLVPYMNLTMSQKSASSLLDLIWLENILPKTTSLAQMKMST--MITNQKGLIKLYFLS---FLVTI--LVSMILF----------NFHE---- +>Procapra_przewalskii_Przewalskis_Gazelle +----MNENLFASFITPM-MLGLPLATLIVLFPSLLFPTSN-RLMNNRLISLQQWVLQLVSKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTAFITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKISKYNFYH-HPELT-STKMPKQ-NTP-W-ETKWTKIYLP-HS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTILLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNQMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNVGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALATVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGGLLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPVASTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIILSSI-P-PQT--MNP-IVFTTILMTVLFGTMIVMISSHWLLIWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLIIYIIMTSTMFSLFMANSTTTTLSL---SNTWNKTPIMTVLVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPITKQMTLL-------PTMVVLSTMLLPLTPILSILD---MN-LMLALLTNFALATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLAGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLALLVMVSNTYGTDYVQNLNLLQCMLKYIVPTMMLMPLTWLSKNNMIWINSTTHSLLISLTSL-LLMNQFGDNSLNFS-LIFFSDSLSMPLLILTMWLLPLMLMASQHHLSKENLIRKKLFITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTTGSLNFLMLQYWVQPMS-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTELMGMPIYQWSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSL-ALTTLFLLTLPIMMT---SSHIYKT-SNYPLYVKTT-ISCAFLTSMVPTMMFIYTGHEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSLWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPD-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLVATS-FTAIYSTRIIFFALLGQPRFSTLITINENNPSLINSIKRLLIGSLFAGFIISNNIPPMTVPQMTMPYYLKMMAMAVTILGFILALEISNITYNLK--FTYPSNIFKFSNLLGYYPTIIHRLAPYMNLTMSQKSASSLLDLIWLENILPKTTSLAQMKMST--MITNQKGLIKLYFLS---FLVTI--LVSMILF----------NFHE---- +>Giraffa_camelopardalis_giraffe +----MNENLFASFIIPT-FLGLPIVILIVMFPNLLFPTSN-RLTNNRLISLQQWTLQLMSKQMMNIHNTKGQTWTLMLMSLILFIGTTNLLGLFPHSFTPTTQLSMNLGMAIPLWAGAVATGFRNKTKASLAHFLPQGTPTLLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTMTALIPFVVLILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMIMSMV-MALFIVLQLKISKHNFYH-NPKPT-PTEMHKQ-HTP-W-ETKWTKIYLP-LS-SSLHF---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAVSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTLWNTISSMGSFISLTAVVLMIFIIWEAFASKREVLAVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLEYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSVILLFLGLTTNMLTMYQWWRDVIRESTFQGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGTTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKSHPLMKIVNNALIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHMGRGLYYGSYTFLETWNVGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALTMVHLLFLHETGSNNPMGIPSDMDKIPFHPYYTIKDILGALLLILVLMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALISSILILALMPLLHTSKQRSMTFRPLSQCLFWILVADLLTLTWIGGQPVEHPFIIIGQLASIMYFLIILVLMPITSAIENNLL---KW--------MH--------MINILMLIIPILLAVAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSTSMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQERTWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNAFTTILFLGAFHNPYMPELYTINFTIKLLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSFPVILSGI-P-PQT--MNP-IIFTTILLTLMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTL-SIISIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMVLNLIMYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPVMTILILTTLLSMGGLPPLSGFMPKWMIIQEMTKNNNIILPTLMAMSALLNLYFYTRLTYSTTLTMFPSTNNTKMKW-QFPTTKQMTLL-------PTMVTLSTMLLPLTPILSVLE---MN-LMLTLLINLLLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNDLYTMLTMALLLILLLAASLAYEWTQKG--LEWTE-MSLVHMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMVLSLFVMATLIILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWVNSTAHSLLISLTSL-LLTNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFAAMELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALTYIQNMVGSLNFLVLQYWAQPVS-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTLLNP-LTDLMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGAMALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELLVMMSAFSWSNATIILMGVNMVITALYSLYMLITTQRGKHTHHINNITPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNLFSSL-SLTTLFLLTIPIMMT---GSSTYKT-SNYPLYVKTA-ISCAFATSMVPTMMFIHTGQEMVISNWHWLTIQTIKLSLSFKMDYFSMMFIPVALFVTWSIMEFSIWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRIGDIGFILAMAWFLANLNAWDFQQIFMLSPN-NSNLPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKLIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSNTNAWALLMTLIATS-FTAIYSTRTIFFALLGQPRFPTLITINENNPTLTNPIKRLLIGSLFAGFIISNSIPPTTIPQMTMPQYLKMTALAVTILGFILALEISNMTQNLK--FSHPSNSFKFSNQLGYFPTIMHRLIPHASLTMSQKSASSLLDLIWLENILPKTTSLIQMKMSI--IITNQKGLIKSYFSS---FLITI--LISMILF----------NFHE---- +>Aepyceros_melampus_impala +----MNENLFASFITPM-LLGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWMLQLVSKQMMSIHNPKGQTWALMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVIMGFRNKTKMSLAHLLPQGTPTALIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKISKYNFYY-NPELT-SIKTPKQ-NTP-W-ETKWTKIYLP-LS-LPPYY---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKTHFVIMFIGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSARPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTILLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIINNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYLFLETWNIGIILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGILSDSDKIPFHPYYTIKDILGILLMILVLMLLVLFMPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALMPMLHMSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFTLILVMMPVASTIENNLL---KWK-------MF--------MVNILTLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLFTLIITQEQMWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGMFALFFMAEYANIIMMNIFTTTLFLGAYHNPYMPELYTINFTIKALLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILATIMFGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVILNLMFSGQW--TVMKLFNPMASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISSSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKAPIMTTLTLVTLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKRMTLL-------PTMIVLSTMLMPLTPILSVLE---MN-LMLALLTNLTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALFLIFLLAASLAYEWTQKG--LEWTE-MSLVYMNIMMAFSVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMAALTILNSHFTLANMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYVIPTAMLMPLTWLSKNNMIWINSTMHSLLISLTSL-LLLNQFGDNSTNFS-LLFFSDSLSMPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALVYIQNSVGSLNFLILQYWVQPVP-NSW-----SSVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLILNP-ITEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSVFSWSNITITLMGLNMIITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGLLY------MNMFASL-TLTTLLLLTVPIMMM---SSNTYKS-SYYPLYVKTT-ISCAFIISLIPTMMFINTGQEMTISNWHWMTIQTLKLTLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILTMAWFLTNLNTWDLQQIFILKPD-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKHIQSIILCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSVIHSLNNEQDIRKMGGLFKALPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLLTLVATS-FTAIYSTRIIFFTLLGQPRFPTLITINENNPLLINSIKRLLIGSLFAGFFISNNIPPTTIPQMTMPQYLKLSALAVTIMGFILALEVSNMTYNLK--FKYPSNFFKFSNLLGYYPTILHRLTPYMNLTMSQKSASSLLDLIWLENILPKTISLIQMKTSI--MITNQKGLIKLYFLS---FLVTI--LISTILF----------NFHE---- +>Oryx_gazella_gemsbok +----MNENLFASFIAPM-ILGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWMLQLVSKQMMSIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTATALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQMKISKHKFYY-NPELT-SMETPKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDSILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNMTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPAYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMTLLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGVCLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGSSSDTDKIPFHPYYTIKDILGALLLILSLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLVPTLHTSKQRSMMFWPISQCVFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPVASAIENNLL---KW--------MF--------MVNTLMLIIPILLAVAFLTLVERKILGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQTWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPILLSSI-P-PQT--MNP-ITFTIILTTIMFGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKYNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLVTAALTMKLGMAPFHFWVPEGTQGISLSSGLILLTWQKPAPVSVLYQISPPINLNLILSL-SILSIMIGGWGGLNQTQLQKIMAYSSIARMGCMTAALRPNPTTMPLNPVTCVIKTSPMSTLFMAHSATATRSL---SHPRTKAPMITALVPGTLLSTGGLPPLSGFMPKWVIIQEMTKNDNSILPTLMAITALLSLYFYMRLTYSTTLTMFPSTNNMKMKW-QFSTMKQMTLL-------PTTGVLSTKLLPLTPILSILE---MN-LMMALLTNLTLTTLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVHMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMAALMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTAMLVPLTWLSKNNMIWINPTLHSLLISLTSL-LLLNQFNDNSLNFS-LIFFSDSLSMPLLILTMWLLPLMLMASQHHLSKENLTRKKLFISMLILLQLFLIMTFTATELIFFYIMFETTLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIHIQDMMGSLNFLILQYWVQPMP-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLILNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITVILMGLNMVITALYSLYMLITTQRGKYTHHINSISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-ALMTLLLLTVPIMMA---SSSTHKT-PNYPLYVKTT-VSCAFITSMIPTVMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSILEFSMWYMHSDPNINQFFKYMLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFVLAMAWFLTNLNTWDLQQIFMLEPN-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKPVQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFMTLITINENNPFLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPHYLKLTALTVTILGFILALEISNMTHNLK--FNYPSNTFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLENILPKTISSTQMKMST--MVTNQKGLIKLYFLS---FLITI--LTSTILL----------NFHE---- +>Lepus_granatensis_Granada_hare +----MNENLFSSFITPT-MMGLPIVILIIMFPTLLFPAPT-RLINNRLVSAQQWLAQLILKQMMMMHSPKGRTWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGAALALIS-ISPTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLVTIIAMI-LTLFALIQLKFHKYSYPL-NPTPK-TLKPTSF-PSP-W-ETKWTKIYSP-LL-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHXTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDQTWAKIHFTVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMVMIFMIWEAFASKREVETVELTTTNLEWLHGCPPPYHTFEEPAYVKA----------MAYPFQLGFQDASSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLNPGDLRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLISTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSLSMI----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSPSLLLIGLLTNTLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIKPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMQQALAITILLGIYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFLRQLHFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNHSLIDLPAPSNISAWWNFGSLLGLCLMIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWLIRYLHANGASMFFICLYMHVGRGIYYGSYTYLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMIHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDLLGFLVLILLLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIIPFLHMSKQRSMMFRPISQVLFWILVADLLTLTWIGGQPVEHPFITIGQVASILYFSIILILMPLASLIENKIL---KW--------MF--------LINTFLLILPVLLAMAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLRPLTSSSLLFIIAPTLALTLALSMWLPIPMPYPLINLNMGVLFILATSSLAVYSILWSGWASNSKYALFGALRAVAQTISYEVTLAIILLCVLLMNGSFTLSSLITTQEYMWILFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNIIMMNALTAILFLGSFHSHTNPEMFTINFATKTLLLTMTFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWYISMPIMLSSI-P-PHM--MNP-LIFSIILFTLFLGTMITMFSSHWLTMWIGLEMNMLAIIPILINKATPR-STEAATKYFLTQATASMILMMAITLNILDSGQW--TLINPQNNFTPIMIMLALIIKLGMAPFHFWVPEVTQGVPLKSGLILLTWQKLAPLSILYQISPSIDSTMMMLV-AILSIMVGGWGGLNQTQLRKILAYSSIAHMGWMAAIITFNPNTMILNLIIYILLTIPMFMMFIQYTNTTTLSL---SQMWNKTPLMVTAILITLMSLGGLPPLTGFIPKWIIIQELTKNGNIIMPTMMAMLALLNLYFYLRLIYSSSLTMFPTTNNLKMKW-QFEPMKRMTFI-------APLIILSTMFLPLTPMLSVLN---MN-LILVLLINMSISLILVTIAFWLPQLNIYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAAQFNNLNLVLIMALMLISILALGLAYEWIQKG--LEWVE-MPSIYVNIFLAFIFALLGMLVYRSHLMSSLLCLEGMMLSLFILITLTALNMHYTLSFMFPIVLLVFAACEAAIGLALLVMVSNTYGMDYVQNLNLLQCMLKTIIPTIMLIPTVWWSKNHMIWINATIYSLLISLTTF-LLLNQPNDTNLNLS-TTFFSDALSTPLLMLTVWLLPLMILASQHHLSKESLLRKKTYISLLISLQIFLVMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLLVALIHLQNSMGSLNFLLIQLSNESLP-TSW-----SNSLMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITILLNP-ITEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERVHSRTMLLARGLQTILPLMAAWWLLASLTNLALPPTINLLGELLIVMASFSWSNLTIILMGTNVLITALYSLYMLSTTQRGKFTYHTNNISPTFTRENTLMMLHLAPLLLLSINPKIILGPML------MNLFSTS-MAVSIIILVLPIMAS---FTNIFNH-NNYPYYVKTS-VSYAFMISLIPTLIFIISNQETMVSNWHWMTIHTLKLTTSFKLDYFSMLFTPIALFVTWSIMEFSMWYMHSDPKINQFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFIMAMAWFAINLNTWEFQQMFMSDNN-VTILPLIGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNKTAQTLILCLGAITTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKTLPFTSSALTIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALIITLIATS-LTAVYSTRIIFFALLGQPRYPTLIIINENNPSLINSIKRLALGSIFAGFLITNLVTPNSIPQMTMPLYMKLTALFVTILGFTIAMELNQLSLHLK--MSTQSNSFNFSNMLGFFPATMHRLLPYVNLSASQNVATLLLDMTWTEKAIPKNISDIQILAST--SVSSQKGLIKFYSLS---FLISM--LLALFILA----------------- +>Pusa_caspica_Caspian_seal +----MNENLFASFATPT-MMGLPIVVLIVLFPSILFPSPD-RLINNRLTSIQQWLIQLTSKQMLSIHNHKGQTWALMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMD-ISTTTAFITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLIMILSMI-LTLFITFQLKVSKHYFPT-NPEPK-HALLLKN-SAP-W-EEKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFASKREVAAVELTTTNIEWLHGCPPPYHTFEEPTYVVL-K--------MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMYLLMLGLTTNTLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEHYETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFMRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINSSFIDLPTPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYMHVGRGLYYGSYTFTETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFILPFVVLALAAVHLLFLHETGSNNPSGITSDSDKIPFHPYYTIKDILGALLLILVLTLLVLFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIMPLLHTSKQRGMMFRPISQCLFWLLVADLLTLTWIGGQPVEHPYITIGQLASILYFMILLVLMPIASIIENNIL---KW--------MF--------MINIISLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSTTMFIMAPILALALALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIMMNILTTLLFFGAFHNPYMPELYVINFTVKTLALTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIISASI-P-PQT--MKP-PILIIIMSTVMSGTMIVLTSSHWLLIWIGFEMNMLAVIPILMKTHTPR-ATEASTKYFLTQATASMLLMMGIIINLTFSGEW--TISKIPNPIASGLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSINPKLLITM-AIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAILTYNPTLMILNLTIYIAMTLSTFMLFMHNSSTTTLSL---SNTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTMFPSVNNMKMKW-QFESAKKIILL-------PPLIIISTMLLPMTPMMSILE---MN-MALTLFTNTALASLLVLIAFWLPQLNTYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHTDNLTTMLTMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYANIFLAFIMSLMGLLMYRSHLMSSLLCLEGMMLSLFVMMTATILNNHFTLASMAPIILLVFAACEAALGLSLLVTVSNTYGTDYVQNLNLLQCMLKIIIPTMMLMPLTWMSKPNMIWINTTTYSLLISLISL-SFLNQLGDNCMSLS-LLFFTDSLSAPLLALTTWLLPLMLMASQFHLSKEPLVRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLFIQNNMGTLNLLMIQLWAQPLP-NSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITALLSP-LTSFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERTHSRTMILARGLQVLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNITIILMGTNIIITALYSLYMLITTQRGKYTYHIKNIKPSFTRENALMTLHLMPLLLLSLNPKIILGPIY------MNLFASS-IITTLFMLTLPIVLT---STSIYKN-KLYPQYVKTT-ISYAFMISMIPTTMFIYSGQEMIISNWHWMTIQTMKLTLSFKLDHFSMIFVPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAVLYNRIGDVGFIMAMAWFLINLNTWELQQIFISHHN-NLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNTMVQTTTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKVLPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLLTLVATS-MTAAYSTRIMFFALLGQPRFNPMITINENSPLLINSIKRLLLGSIFAGYLISYNITPTSTPQMTMPHYLKLTALTVTLLGFILALELNLTSQSLK--LKHPSNLFKFSNLLGYFPTIIHRYMPMVNLSASQKLASTLLDAIWLESALPKSISYFHMKSSV--TISNQKGLIKLYFLS---FTITL--ILALMMI----------NSHE---- +>Myodes_regulus_Korean_red-backed_vole +----MNENLFASFITPT-MMGLPIVILIIMLPSMLLTSSK-RLVSNRFHLFQQWLIKLIIKQMMLIHSPKGRTWSLMLVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPLWAGAVILGFRHKLKASLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLTS-ISLPTATITFIILGLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITVLSTT-ITLFILMQLKISLHNFPQ-TPLMK-SIELMKT-NNP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLDDMWAKTHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLIMIFMIWEAFASKREVLHVEHSATNLEWLHGCPPPYHTFEEPTFVKV-K--------MAYPSQLGLQDASSPIMEELMNFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLSFDSYMVPTSDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKNFEDWSLSMI----------MTHQTHAFHMVNPSPWPLTGAFSAFLLTSGLVMWFHFNSTILLSLGLLANTLTMYQWWRDVIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNNMNQALLITILLGAYFTILQASEYFETPFSISDGIYGSTFFMATGFHGLHVIIGSTFLLICLLRQLNFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTIIRKKHPLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGVYYGSYNMIETWNMGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVFVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDFLGVLFLLMVLMILVLFFPDVLGDPDNYTPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALILSIMILALMPLLHTSKQRGLAFRPITQTMYWTLVADLFILTWIGGQPVEYPFVIIGQTASIAYFAIIVIFMPIAGMIENNIL---DLD-------MH--------FINILTLLVPVLIAMAFLTLVERKILGYMQLRKGPNIVGPYGVLQPFADAMKLFIKEPLRPLATSTTLFIIAPTLSLSLALSLWIPLPMPHPLVNLNLGILFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSFSIQALIYTQEPMWLLIPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIILMNALSTIVFMGPLHNLYNPELYTTNFMLKTLFLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISIPIFMASI-P-PYT--MNP-ITLLIIYFTILMGPMITMLASNLFIMWIGLEMNLLALIPLMMHNSNPR-STEAATKYFLTQATASMILLLSIIMNFKQLGLW--TFQPETHDLIMTMTFISLAIKLGLAPFHSWLPEVTQGIKLKVALILLTWQKIAPLSILAQFYELLNPKMLILS-AIISVLIGAWNGLNQTQVRKIMAYSSIAHMGWMISILSYNPSLTMLNLLIYILMTVPMFLIFHAHSFTSITSM---SLMWNKMPMALPMISLILLSTGGLPPLTGFLPKWAIITELLKNNNLILATLMAMTALINLFFYTRLIYSTSLTTFPTNNNSKMYI-QHNNTKTNNIL-------SPLMILSTMMLPLSPLLL------MN-MTLVLLINLVLSMALILVAFWLPHLNTYTEKANPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQFPNMNFPTLMAFILITILAVGLAYEWSQKG--LEWTE-MTPAVINITLAYTFSFLGTLMFRSHLMSTLLCLEGMMLSLFILASITPLNTHSMMMFPIPIVILVFAACEAAVGLALLAKISNTYGSDFVQNLNLLQCMLKIILPSLMLLPLTWLSNSKKVWINVTAYSLLINLISI-SLLWQNNESSLNFS-TMFSADPLSAPLLVLTTWLLPLMLLASQNHIKKEHEHNKKLYISLLVSLQVLLIMTFSANELIMFYVLFEATLIPTLIIITRWGNQTERLNAGVYFLFYTLIGSIPLLIALIYIQSSTGTLNFILMSLNYTPIN-QTW-----ANNILWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRVSMLLDP-TTKSMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAIMIQTPWSFMGATALMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMVFPLMATWWIMASLANLALPPTINLIGELMITISLFSWSNPSIILLGANILITSLYSIYMIVTTQRGGLTSHMNNLQPSHTRELALMALHILPLILLTINPKLILGPTM------MNTITSS-ILLIFALLLFPMAIS---LTNLTKQ-INFPNYVTLC-IKYAFFISLIPLSSFFNSNTEIMITNWHWITIGSMKLTLSLKFDFFSIIFLPVALFVTWSIMEFSMWYMHSDPNLDRFIKYLLLFLITMVILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRSDANTAALQAILYNRIGDIGFILAMAWFCTKTNSWDLQQIFIT-SE-SNTIPLAGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTSNNETILTAMLCLGAVTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLAKAMPFTSSCLTIGSLALTGTPFLTGFYSKDLIIEAANTCYTNAWALLITLVATS-MTAIYSMRIIYFVLMSKPRFPSTITINENDQLLTNPIKRLALGSILAGFFISYNIPPTTVQVMTMPWYLKTTALMVTIAGFAIALDLNNLTNNLT--PTKPSPTNSFSTSLGYFPTIMHRLLPMKSLNTGFKTALTLLDLIWLEKAIPKIISTMHMMTSS--TLSNQKGMVKLYFLS---FLITF--LSIPIMLII---------------- +>Mazama_nemorivaga_ +----MNENLFASFIAPV-MLGIPLATFIIIFPSLLFPTSN-RLINNRFISLQQWMLQLVSKQMLGNHNAKGQTWALMLIALIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVIMGFRNKTKASLAHFLPQGTPTPLIPMLIIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLTLMS-ISTTMALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFMMIMSMF-LTLFIIFQLKVSKHNFLL-NPEPM-LTKTQKQ-NTP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMNAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAFHMVNPSPWPLTGALSALLMTSGLIMWFHFNSVVLLMIGLTTNFLTMYQWWRDVIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITISLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MANIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYSSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGALLLILFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIFMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEHPFTIIGQLASILYFLIIMVLMPVTSTIENNLL---KW--------MF--------MINMFMLIIPILLAVAFLTLVERKILGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLMMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHSPIMPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-IIFTLILSTMMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFSSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFMLFMTNSTTTTLSL---SHTWNKLPVMTVLILVTLLSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTFMAIMALLNLYFYMRLTYSTALTMFPSVNNMKMKW-QFSTTKKMTLL-------PTMVVLSTMLLPLTPIMSVLE---MN-LMLALLTNFSLSSLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWACQTNNLSTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTYSLLISLTSL-LLMNQFNDNSLNFS-LMFFSDPLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFAAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIYLQNTIGSLNFLILQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMLLSP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTFLPLMAAWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGMNMVITALYSLYMLITTQRGKYTYHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSTF-TLITLLLLTIPIITT---NFNNYKT-YDYPLHVKTT-ISYAFITSMIPTMMFIYTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLNPN-NSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLAQSTLLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLVTINENNPFLMNSIKRLMVGSLFAGYIISNNIPPTTIPQMTMPPYLKMMALVVTILGFILALEVSNMTQNLK--FNYASNTFKFSNMLGYFPTVMHRLTPYMNLTMSQKSASSLLDLIWLENILPKTISLMQMKTST--MVADQKGLIKLYFLS---FLITI--IISTILL----------SFHE---- +>Ammotragus_lervia_aoudad +----MNENLFTSFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWLLQLVSKQMMSIHNTKGQTWTLMLVSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALTA-INTTTALITFIILILLTILEFAVAMIQAYVFTLLVNLYLHDNTMPQLDTSTWLTMILSMF-LTLFIILQLKISKHNFYY-NPELM-ATKTPKQ-NTP-W-ETKWTKTYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMTLLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIALGIYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNVGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFVITALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGAMLLILTLMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILMIVPFLHMSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVENPYIIIGQLASIMYFLIILVMMPVASTIENNLL---KW--------MF--------MVNILMLIIPILLAVAFLTLVERKVLGYMQFRKGPKVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEQVWLIFPAWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYIPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-TIFILILMTVMLGTIIVMISSHWLLIWIGFEMNMLTIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLTFSGQW--TATKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---AHTWNKAPIMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLFFYMRLMYSTTLTMFPSTNNMKMKW-QFSTTKRMTLL-------PTMTVLSTMLLPLTPMLSILE---MN-LMITLLTNFTLATLLVTIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIVPTMMLMPLTWLSKNSTIWINSTLHSLLISLTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLVLTMWLLPLMLMASQHHLSKESLARKKLFISMLILLQLFLIMTFSAAELILFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIHIQNTMGSLNFLILQYWVQPMP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-ITDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVTSTFSWSNITIILMGLNMVITALYSLYMLIMTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSL-TLTTLILLTAPIMTI---TLGTHKY-TNYPLYVKTT-VSCAFITSMIPTMMFIHTGQEMVISNWHWLTIQTLKLSLSFKMDYFSVMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILTMAWFLTNFNTWDLQQIFMLKSD-NSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPLLINSIKRLLIGSLFAGFVISNNIPPMTIPQMTMPFYLKMTALTVTILGFTLALEISNMTHYLK--FNHPSNMFKFSNLLGYYPTIMHRLIPYMNLTASQKSASSLLDLIWLETILPKTISLAQMKMST--TITSQKGLIKLYFLS---FLITM--LVSTILF----------NFHE---- +>Antidorcas_marsupialis_springbok +----MNENLFASFITPM-VLGLPLVTLIVLFPSLLFPTSN-RLVNNRLISLQQWILQLISKQMMSIHNPKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWVTMILSMF-LVLFIIFQLKISKYNFHH-NPEPT-LTKMPKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSTTLLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITISLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINMRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFTHVGRGLYYGSYTFLETWNVGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIMSILILVLMPLLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPFIIIGQLASILYFLLILVLMPVASTIENNLL---KW--------MF--------MVNILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYLPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-MIFVIILTTVLLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNSTASMLMTMALATKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLDLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPIMTVLVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSITKQMTLL-------PTLVTLSTMLLPLTPILSILE---MN-LMLALLTNFTLATLLVTIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIISTTMLMPLTWLSKSNMIWINPTMYSLLISFTSL-PLMNQFNDNSLNFS-LIFFSDSLSMPLLILTMWLLPLMLTASQHHLSKENLIRKKLFITMLILLQLFLIMTFTATELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIHIQNMMGSLNFLILQYWVKPMS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTLLLNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQLFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINIILPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNMFSSF-TLVTLLLLTVPIMMT---NSNIYKT-SNYPSYVKTT-ISCAFLTSMIPTMMFIHTGQEMVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLINLNTWDLQQIFMLNPN-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIILCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNMPPMTVPQMTMPPYLKMMAMAVTILGFILALEISNTTYYLK--FKYPSNIFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQMKMST--TVTDQKGLIKLYFLS---FLITI--LVSTILL----------NFHE---- +>Phalanger_vestitus_Steins_cuscus +----MNENLFATFTTPS-IMGITTLPIIMLFPCLILTSPK-RWLPNRIQTLQMWLIRSVTKQMMTIHNKQGRTWTLMLMSLILFIASTNLLGLLPYSFTPTTQLSMNIGMAIPLWLGTVIMGFRNKPKASLAHFLPQGTPTPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALSS-INMTVSSITFIILLLLTILELAVAMIQAYVFTLLVSLYLHDNSMPQLDTSTWSLTITMML-ISLFCVYQMKMINQTMISITPHDKKNIM--KT-QLP-W-EKKWTKIYLP-HS-LPLPL---MFINRWLFSTNHKDIGTLYLIFGAWAGMVSTALSLLIRTELGQPGTLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLLTGYTLNDLWTKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNVISSIGSFISLTAVILMVFIIWEAFASKREVSSVELTTTNLEWLYGCPPPYHTFEQPVFVKS-QLQE-----MPYPTQLGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYIIISMLTTKLTHTNTMDAQEVETIWTIMPAVILILIALPSLRILYMMDEIYNPYMTVKAIGHQWYWSYEYTDYKDLVFDSYMIPTQDLTPGQLRLLEVDNRMVLPMELPIRMLISSEDVIHAWAIPSLGLKADAIPGRLNQATLTSTRPGIYYGQCSEICGSNHSFMPIVLEMTTLEYFEKWSSMMQP---------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSPLLVLIGLTCMFLTMYQWWRDIIREGTFQGHHTPVVQKSLRYGMILFIVSEAFFFLGFFWAFYHSSLAPTHELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGSREQMIQALSITILLGLYFTALQAMEYYESSFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCLFRQLNYHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MFNLRKTHPLMKILNKAFIDLPTPSNISAWWNFGSLLGFCLTIQILTGLFLSMHYTPDMLTAFSSVAHICRDVNYGWLIRNLHANGASMFFMCLYLHIGRGIYYGSYLYKETWNTGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGTTLVGWIWGGFSVDKATLTGFFAFHFILPFIITAMVLVHLLFLHETGSNNPLGINPDSDKIPFHPYYTIKDTLGLTLMLLTLLLLSLFSPDMLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVMALLASILILLIMPLLHTSNQRSLMFRPISQTVFWMLATNLLILTWIGGQPVEEPYITIGQTASISYFLLIIVLMPLAGLLENHMLK-PKW--------MF--------IINLLMYIIPILLAIAFLTLVERKALGYMQFRKGPNVVGPYGLLQPIADGMKLFSKEPLQPVTSSTTMFIIAPTLALTLSLTMWTPLPMPHSLIDLNLGLLFILALSGLSVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAIILLSIMLINGSFTLKNLITTQENMWLIITTWPLVMMWYVSTLAETNRAPLDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIMLMNAMTTILFLGSSINHNFTHLNTLSFMTKTIALTFLFLWVRASYPRFRYDQLMHLLWKNFLPMTLAMCLWFISIPIALSCI-P-PQI--MSP-YILLIMLTSLLLGTSLTLFSNHWLTAWMGLEINTLAIIPMMTYPNHPR-ATESAIKYFLTQSTASMMLMFAIINNAWMTNQW--TLLQTSDQTSSTIMTLALAMKLGLAPFHFWVPEVTQGIPLTSGMILLTWQKIAPTSLMYQISPSLNMKILVML-ALLSTILGGWGGLNQTHMRKILAYSSIAHMGWMTIIILINPTLTLLNLAIYITTTLTLFLALNHSSITKIKSL---ANLWNKSSSMTIVIALTLLSLGGLPPLTGFMPKWLILQELITYNNIATATMMAMSALLNLFFYMRIIYTTTLTMPPSINNSKLQW-PHPQTKTTNII-------PLLTIISSFLLPLTPLSITLS--MIN-LILTLIINTTLSTIIVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWAIQLSSPNTMLILSYSLILLLTAGLTYEWLQKG--LEWNE-MTSINLNLTVAFSLALAGVLIYRSHLMSTLLCLEGMMLSLFIMMALLISHFHMFSTSMMPIILLVFSACEAGVGLALLVKISNNYGNDYVQNLNLLQCMLKILIPTSMLIPLIWFSKKPWIWPNPTVHSLLISTASL-TLLYHSTDLSHNYN-NSFFTDSLSSPLLVLSCWLLPLMMIASQNHMAKESTNRKKTYLTMLIILQLFLLMAFSSAELIMFYILFEATLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSMPLLVALLYMYINMGSLHILLISMMSTNMN-FSM-----SNSLLWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQP-ITSNLYYPFIILSMWGTIMTS--SMCLRQTDLKSLIAYSSVSHMALVIIAALLQSTLSFMGATALMVAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLIASLANLALPPTINLLGELMIIVSSFSWSNFSIILLGLNTVITALYSLHMLTTSQRGKFTHHLYPIKPTLTREHLLMVLHLIPLLITSINPKFILGITY------MNFMLNTTILLSIIMLTFPLIHN---LTFPNKT-NQFPTYCTNT-VKMSFFTSLPSLLLFMNSGYESTMTNWQWFSIGPLNMTMSFKLDYFSIIFIPIALYVTWSILEFSLWYMHSDPYIHQFFKYLIIFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWYVRTDANTAALQAILYNRIGDIGFMLTMAWLMINNNSWDLQHIFTTNMN---TLAMLGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMLKNNTLILTIALCLGAITTLFTAICAITQNDIKKIIAFSTSSQLG--LMMVTVGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLLTLLPITSSALITGSLALMGTPFLAGFYSKDSIIEAMNTSYTNMWALIITLIATT-LTAMYSMRIIYFALLNQPRFSPLSPINENNKNLINPIMRLATGTILAGFILTTSIPPTSTIPMTMPPTMKLLALIITALGLLIATELNSLTNKYQ--PTPHTHTHNFSNMLGYFTHLFHRLYPLANLQLGQHMATMLIDLNWYEKTGPKGQANLHTNASS-SISSIQKGLIKTYFMS---FMIFI--PMIMLII------------------ +>Antilope_cervicapra_blackbuck +----MNENLFASFIAPM-ILGLPLVTLIVLFPSLLFPTSN-RLVNNRLISLQQWVLQLVSKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHSFYH-NPEPS-PTKTLKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLMFGAWAGMVGTALSLLIHAELGQPGTLLGDNHIYNVVVTAHAFVVIFFMVMPIMIGGFGNWLVPLMIGAPYMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLASNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDVIRESTFQGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINTRKTHPLMKIVNNMFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPMLHTSKQRSMMFRPISQCLFWVLVADLLTLTWIGGQPVEHPYIIIGQLASVMYFSLILVLMPVASTIENNLL---KW--------MF--------MVNILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWMIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPHMPELYTINFTTKSLLLTTTFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILATVLLGTIIVMMSSHWLLIWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISTSINLDLILIL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMMAVLLYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPVMTVLVLATLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAMTALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSITKQMTLL-------PTMVTLSTLLLPLTPILSILD---MN-LMLALLTNLALATLLVTIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLISLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVVMSNTYGTDYVQNLNLLQCMLKYIFPTMMLMPLTWLSKSNMIWINSTTHSLLISLTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLVLTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYIQNTTGSLNFLILQYWVQPMS-NSW-----SNVFTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTLLLNP-VTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQMFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTYHINNISPSFTRENALMSLHIMPLLLLSLNPKIILGPLY---MKVMNMFSSF-TLVTLLLLTIPIMMT---SSDAYKT-SNFPLYVKTT-ISCAFLTSMIPTMMFIHTGQEVVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPHINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLMNLNTWDLQQIFVLNPN-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPMTVPQMTMPYYLKTMALAVTILGFILALEISNTTYNLK--FKYPSNTFKFSNLLGYYPTIMHRLTPHASLTMSQKSASSILDLIWLENILPKTTSLIQMKMST--MVTNQKGLIKLYFLS---FLITI--LVSTALL----------NFHE---- +>Tympanoctomys_barrerae_plains_viscacha_rat +----MNENLFASFITPT-MLGFPIVILIIMFPAMLFPNPK-RLINNRMIALQQWLIKLILKQMMSMHTPKGRTWSLMLISLILFIGTTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVILGFRHKTKMSLAHFLPQGTPILLIPMLIVIETISLFIQPMALAVRLTANITAGHLLMHLIGGATSVLLM-ISPPAALMTFIILLLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-ITLFILFQTNTSTHLFFI-NPQQS-HSMATKQ-KTP-W-EKKWTKIYSP-LL-SHQQY---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGGSDMTFPRMNNMSFWLLPPSFLLLLASSMVKAGAGTGWTVYPPLAGNLAHGGASVDLTIFSLHLAGVSSILGAINGITTMINMKPPAIMQYQTPLCVWSVLITAVLLLLSLTVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLDSAWAKIHFFIMFTGVNITFFPQHFLGLSGMPRRYSDYPNAYTFWNTVSSMGSFISLTAVMVMIFMVWEAFASKREVLTTELTSINLEWLHGCPPPYHTFEEPTYIKT-F--------MAYPYQLGFQDATSPIMEELLHFHDHTLMIVFLISTLVLYLISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEVNNPMLTVKTMGHQWYWSYEYTDYEELNFDSYMIPTTDLKPGDLRLLEVDNRIVLPMEMPVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTILTSSRPGLFYGQCSEICGSNHSFMPIVIEMVPLKTFENWCSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGMIMWFHFNSTTLLTLSMMTNLMTMYQWWRDVVREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLAPTPELGGYWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKQMMQALTITIILGAYFTLLQVSEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLMACLLRQLYYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKSHPLIKIINHSFIDLPAPSNISAWWNFGSLLGVCLMLQIITGLFLAMHYTADTTTAFSSVTHICRDVNYGWLIRYLHANGASMFFIFLYLHIGRGIYYGSFTFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPTLVEWIWGGFSVDKATLTRFFAFHFILPFIITAMVMIHLLFLHETGSNNPSGLNSDSDKIPFHPYYTIKDILGLLFMILTLMTLVLFSPDLLGDPDNYTPANPLNTPPHITPEWYFLFGYAILRSIPNKLGGVLALVFSILILMLFPALHLSKQRSMTFRPLSQCLLWILVANLIILTWIGGQPVEYPFITIGQLASVIYFSIILIFMPATSLMENKLL---KW--------MY--------MINFLLLIIPILLAMAFLTLMERKMLGYMQLRKGPNIVGPYGILQPMADALKLFIKEPLYPSTSSTLLFTIAPSLALTLALSMWIPMPMPHPLINMNLGALFILATSSLAVYSILWSGWASNSKYALFGALRAVAQTISYEVTLAIILLSILILNGSFTLSTLMYTQKNTWLILPTWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNILMMNALTTIIFLNTTPISSNPEIHSTNFMIKTLILTALFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISMPIFMCSI-P-PHSM-MNT-MMTTIIYSTLIMGTLVTLISSHWLLMWIGLEMSMLAIIPILMNKSNPR-STEAATKYFLMQATASMILLLSIMLTMMCSGQW--SIFYSDNLTISLILTTSLIMKLGLAPFHFWVAEVTQGTSLLTGMILLTWQKIAPLSILLQNFPTINQPLILTS-AVLSTLLGGWGGLNQTQLRKILAFSSIAHMGWMLAVLHYNPSASLLNLMIYIMLTISTFSTLHINNNLTTLTL---SHVWSTAPPVIIIILMNLLSLGGLPPLTGFAPKWIIIQEMVKNNNIMISTFMAITALLNLYFYMRLTYSTTLTLFPSTSNTKTKW-HFHNNKNTIML-------PPLITLSTLSLPMTPLLMILN---MN-IIMSLMTNFMLTLLLITIAFWLPQLNTYTEKASPYECGFDPTEITRLPFSMKFFLIAITFLLFDLEIALLLPLPWALQTPSLNTTTWVSICLILILSLGLTYEWLQKG--LEWTE-MTSILFNITTAFIISFMGIMIYRSHMMSSLLCLEGMMLSMFILGAAVMLNFHYTLAFSTPVMLLVFAACEAAVGLALLVMISNTYGIDYVQNLNLLQCMLKIIMPTIMLIPTVWLSKPSSMWINTTSYSMLIALISL-SYLNNTDVIGTNHS-LVLTSDFLSSPLLILTTWLLPLMIIASQHHLKNETEARKKTYISLLVSLQLFLILTFSATEMIMFYILFETTLIPTLIIITRWGNQTERMNAGLYFLFYTLIGSLPLLVTLIYLQNQMGTLNFLLFNYYKPMSD-FTW-----SNSLIWLACTMAFMIKLPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGLMRILQLLEP-LTNSMAYPFLLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSLMGATSLMIAHGLTSSLLFCLANSNYERVHSRTLLLTRGLQMLFPLMGTWWIIATLTNLALPPSINLFGELLIVMSTFSWCNLTIILTGLNILITALYSLYMLISTQRGKLPYHIHNMPSTFTRENILMSLHIIPLLLLTLNPKIVLGNLY------MNLFNSS-FIMTLMILLFPIITP---LTNIYKK-PLYPHYVKKI-ISVAFLLSLIPTLSLFYSNHEAMVCNWNWLNIHSFHLNINLKLDYFSILFMSVALFVTWSIMEFSLWYMHSDPNMDKFFKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRSDANTAAMQAVLYNRIGDIGFILSMTWFLLHSNSWDLQQIFITQEK-TNIIPMLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPMLHNNQPFQTLCLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLHKILPITSSSLMIGSLALTGIPFLTGFYSKDLIIESATTSYTNAWALVITLIATS-LTAVYSTRIIFFALLNNPRFNFSLSMNENDPSMINPIKRLAIGSILAGFFMSHNIPITNTPQMTMPLYVKFAAILTTILGFIIALELNMMTKNLK--SHYSTKLTNFSNMLGYFPSLIHRMPPYINLSMSQNLASLMIDSIWLEKSLPKSISQTPSIASX--TTSTQXGLPKFYFLSFKTFLMSI--TLTFILLF----------------- +>Mammuthus_primigenius_woolly_mammoth +----MNEELSAFFDVPV-----GTMMLAIAFPAILLPTPN-RLITNRWITIQQWLVKLIMKQLLSIHNTKGLSWSLMLITLTLFIGLTNLLGLLPYSFAPTAQLTVNLSMAIPLWTGTVILGFRYKTKISLAHLLPQGTPTFLIPMIIIIETISLLIRPVTLAVRLTANITAGHLLIHLTGTAALTLLS-IHSMTITVTFITVVVLTILELAVALIQAYVFALLISLYLHESAMERMDIIIWLLAVVIVL-TTLMIFLHLKTLKIIRLL-FPVSK-ELSKKSC-VFP-W-KKKWTKNYPP-SSMYP------MFANRWLYSTNHKDIGTLYLLFGAWAGMVGTAFSILIRAELGQPGSLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGTGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILSAINFITTIINMKPPAMSQYHMPLFVWSILVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMVSHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLNHTWAKIQFLVMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTAWNTASSMGSFISLVAVILMVFMIWEAFASKREVSVMELTTTNVEWLNGCPPPHHTFEEPAYVKS-NS-------MAYPLQLGFQDATSPVMEELLHFHDHTLMIIFLISSLVLYIIMLMLTTKLVHTNMMNVQEMEMIWTILPAIILILIALPSLHTLYMMDEINNPLLTIKTMGHQWFWSYEYTDYEDLAFDSYMITTDSLKFGELRLLEVDNRMVLPTDLPVRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQVTLTSMRPGLFYGQCSEICGANHSFMPIVLELVPLKYFESWSASLA----------MTHQTHAYHMVDPSPWPLTGALSALLMTSGLTMWFHYHSVVLLFLGLMTNTLTMFQWWRDVVREGTFQGHHTPVVQEGLRYGMILFITSEVLFFTGFFWAFYHSSLAPTPELGSYWPPVGVYPLNPLEVPLLNTSVLLASGVTITWAHHSLMEGNRKNMLQALLITILLGVYFTLLQMFEYYEASFTISDGIYGSTFFVTTGFHGLHVIIGSTFLLTCFIRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYLSIYWWGS--MTHIRKSHPLLKILNKSFIDLPTPSNISTWWNFGSLLGACLITQILTGLFLAMHYTPDTMTAFSSMSHICRDVNYGWIIRQLHSNGASIFFLCLYTHIGRNIYYGSYLYSETWNTGIMLLLITMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGTDLVEWIWGGFSVDKATLNRFFALHFILPFTMIALAGVHLTFLHETGSNNPLGLTSDSDKIPFHPYYTIKDFLGLLILILFLLLLALLSPDMLGDPDNYMPADPLNTPLHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILGIMPLLHTSKHRSMMLRPLSQVLFWTLATDLLMLTWIGSQPVEYPYIIIGQMASILYFSIILAFLPIAGMIENYLI---K---------MF--------LINVLTVTLPILLAVAFLTLVERKALGYMQLRKGPNVVGPYGLLQPIADAIKLFTKEPVYPQTSSKFLFTIAPILALTLALTVWAPLPMPYPLINLNLSLLFILAMSSLMVYSILWSGWASNSKYALMGALRAVAQTISYEVSMTTIILSMVLMNGSFTLTAFATTQEHLWLIFPMWPLMMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFMAEYANIIMMNALTVILFMGTSCNPQMPEISTINFVVKTMILTICFLWVRASYPRFRYDQLMYLLWKNFLPLTLALCMWHISILISLACI-P-PQA--MNP-LALSLILTTLLAGTLITMMSSHWLTAWMGLEMNMLTMIPILMKTTNPR-STEAATKYFMTQATASMMLMMALTINLMYSGQW--SIMKMTNPVASNVALMALMTKLGSAPFHFWVPEVTQGVELTSGMILLTWQKLAPLSLLYQMATYTNTNLIYLS-GLLSILIGGWGGLNQTQLRKILAYSSISHMGWMLIILPFNPTLTLLNLAIYILLTLSIFMILANTLTTSMSSL---TLMWNKTPAMTIMLMTTLLSLGGLPPLSGFTPKWLMIHELTKNNSIIMPLTMAIMTLLNMYFYMRLIYYSSLTILPSTNNMKMTW-QFTSTKHTMML-------PTLITLSNMLLPLTPMISMLE---MN-LMTTLLTNTMLTSLMVLIAFWLPQTYTYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQANNTNLTLLMSFMLIILLAIGLAYEWLQKG--LEWTK-MPYIYMNITLAFVISLIGTLMYRSHLMSSLLCLEGMMLSLFTLNALLSLNMNFTLSTTVPLILLVFAACEAAVGLALLIMISNTYGLDYVQNLNLLQCMLKTILPTIMLIPLAWLTSNNMVWINTTLYSFAISLTSL-HLLHQPLDNSLNLS-PEFFLDSLSTPLLILTIWLLPLMLIASQSHLSSGSTFQKKSYITTIILLQVSLIMTFAATDLILLYIMFETTLIPTMIIITRWGNQLERLNAGSYFLFYTLVGSLPLLVTLMLIQNTLGSLNLMMLPYLAKSIN-NLW-----STNMLWLTCIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITILLDP-LTTHMYYPFLMLSLWGMVMTS--SICLRQTDMKSLIAYSSVSHMALVIIAIMLQTPWSFMGALALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLINMAPPPTINLIGELLIITTSFSWSNLTIFPMGLNVLITTMYTLHMMTTTQRGKTSHHAKSIKPSFTRENTLMTLHLLPLLLLSLNPNIIL----------MNPISTL-TLASLIILTLPITTT---LLQNNKT-NCFLYITKTA-VTYAFVISLIPTLLFVQSNQEAYISNWHWMTIHTLKLSLSFKLDFFSLTFMPIALFITWSIMEFSLWYMHSDPHINRFFKYLLLFLITMLILVSANNLLQLFMGWEGVGIMSFLLISWWHGRTDANTAALQAMLYNRIGDMGFIMMMAWFIIHLNSWEFQQIFLTNPK-NTTLPLLGLLLASTGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVMAGVFTLIRFYPLMENNLTVQTSTLCLGAITTLFTAICALTQNDIKKIIALSTSSQLG--LMMVTIGINQPHLAFTHMCTHAFFKAMLFLSSGSIIHNLDNEQDIRKMGGLYKTMPITSTAIIIGSLALTGMPFLTGFYSKDPIIETANMSYINTWALLVTLIAVS-MTASYSTRIIFFALLGQPRYPTLTRINENNPHLVNPIKRLILGSIFMGFFISMNTIPHTTPQMTMPPHLKFMALAVTLLGFTVATELNNMTHNLM--FKQPSRMYTFSTTLGYYPTTTHRILPYLSLTMSQNLATTIMDSIWLEKMIPKNLTTMQKTAAS--LVSNQKGLMKLYFLS---FLLSI--TLGLLIAL----------------- +>Connochaetes_gnou_black_wildebeest +----MNENLFASFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLVNNRLISIQQWLLQLVSKQMMSIHNTKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLALMS-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHYFYH-NPELA-PTKMLKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLMLGLTTNMLTMYQWWRDVIRESTFQGHHTSAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYTFLETWNVGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPTGISSDTDKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPAAGTIENNLL---KW--------MF--------MLNILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTATLFLGAFHNPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILMTVMLGTMIVMISSHWLFIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLIMTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKAPIMTALVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTFL-------PTMIVMSTMLLPLTPILSILE---MN-LMMALMTNLTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLTTMLTMALLLILLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIIPTVMLMPLTWLSKNSMIWINPTLHSLLISLTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLIRKKLFISMLILLQLFLIMTFTAAELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYIQNTMGSLNFLILQYWVQPIT-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-MTDFMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNMFSSL-TLMTLLLLIIPIAMT---SSNSHKN-PNYPLYVKTA-ISYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFVLAMAWFLTKLNTWDLQQIFMLEPT-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKLAQSIILCLGAITTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPALIIINENNPLLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPHYLKTTALMVTILGFILALEISNMTYNLK--FNLPSNTFKFSNLLGYYPTIMHRLAPHMNLTMSQKSASSLLDLIWLENILPKTTSLLQMKMSI--TITNQKGLIKLYFLS---FLITI--LVSTILL----------NFHE---- +>Gazella_subgutturosa_goitered_gazelle +----MNENLFTSFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLMNNRLISLQQWVLQLVSKQMMSIHNPKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTMALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYH-NPEST-SAKTLKQ-STP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSARPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDVIRESTFQGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINTRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILALMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPAASTIENSLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWMIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILSTVLLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMELFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISTSINLDLILTL-SILSITIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFVLFMANSTTTTLSL---SHTWNKTPIMTVLVLTTLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPITKQMTLL-------PTMITLSTMLLPLTPILSILE---MN-LMLALLTNLTLATLLVTIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKFIFPTMMLMPLTWLSKSSMIWINSTSHSLMISFTSL-LLMNQFNDNSLNFS-LIFFSDALSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYIQNTAGSLNFLILQYWVQPMS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTLFLNP-VTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQMFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIVLMGLNMVITALYSLYMLITTQRGKYTYHINNISPSFTRENALMSLHILPLLLLSLDPKIILGPLY------MNMFSSF-TLATLLLLTIPIMMT---SSDTYKT-FNYPLYVKTT-ISCAFLTSMIPTMMFIHTGQEMVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLMNLNAWDLQQIFTLNPN-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPALIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPMTVPQMTMPYYLKTMALAVTILGFMLALEISNTTYNLK--FKYPSNAFKFSNLLGYYPTIMHRLTPYMNLTMSQKSATSILDLIWLENILPKTTSLIQMKMST--AITNQKGLIKLYFLS---FLITI--LVSTILL----------NFHE---- +>Leontopithecus_rosalia_golden_lion_tamarin +----MNQNLFASFNIPT-MLGVPLVFLIIALPTTLILSSK-NLFNNRLSSIQQWLIQLTLKQMMLTHTTKGRTWSLMLLALISFIALNNILGLTPYAFTPTTQLSMNLGMAIPLWAATVLMGLRFKTKSSLAHFLPQGTPIPLIPMLIIIETISLFIQPVALAVRLTANITAGHLLMHLLGDTTLTLLS-IYLSTSTITIIIIILLITLELGVALIQAYVFTLLVSLYLHDNSMPQLNIAPWPMVIMSMI-ITLFFIMQLKMLNFTFHY-NPLPK-LVETQKH-KTT-W-ELKWTKIYLP-HS-MFQQY---MFMNRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRTELGQPGSLMEDDHVYNVIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNLSHPGASVDLTIFSLHLAGISSILGAINFITTIVNMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSIGSFISLTAVILMVFMIWEAFSSKRKVLAIEQLYTNLEWLYGCPPPYHTFEEATYVKS----------MATPAQLGLQNATSPIMEELIAFHDHALMIIFLISSLVLYIISLMLTTKLTHTSTMNAQEIEMIWTILPALILITIALPSLRILYMTDEFNKPYLTLKAIGHQWYWTYEYSDYEDLVFDSYIMPTYFLEPGEFRLLEVDNRTTLPMEADIRMLISSQDVLHSWAVPSLGVKTDAIPGRLNQAMLASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWASYLYIV--------MTHQTHAYHMVNPSPWPLTGALSAFLLTSGLVMWFHFYHTLLLTAGLLASSMTMFQWWRDVVRESTYQGHHTAPVQKGLRYGMILFIISEIFFFAGFFWAFYHSSLAPTPQTGGLWPPTGITPLNPMEVPLLNTTVLLASGVTITWAHHSLMEANRKESTQALLLTIMLGIYFTCLQLSEYSEAPFTISDGVYGSTFFMATGFHGLHVIIGTTFLITCYFRQQLYHFTSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTSPRKTHPLAKIINESFIDLPTPSNISSWWNFGSLLGTCLIIQITTGLFLAMHYTPDTSTAFSSVAHIARDVNYGWMIRYLHANGASMFFICLFLHIGRGLYYGSFLSLKTWNVGTILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFTFHFILPFIIAALATIHLLFLHETGSSNPSGMASEPDKITFHPYYTTKDILGLIFLLLFLMSLTLFLPDLLTDPDNYTLANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILMIIPMTHLSKQQSMKFRPISQILFWTLVADVLKLTWTGGQPVEYPFITIGQTASIMYFLIILTLIPLSALVENKLL---KW--------MY--------MINLLLLVVPALIAMAFLTLTERKILGYMQFRKGPNIVGPYGMLQPIADAMKLFTKEPLLPTTSTMTLYLTAPTLALSIALLLWTPLPMPYPLINFNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLQSLITTQEHHWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFLSTPYNMIMPETYTINFMAKTLLLTTLFLWIRTAYPRFRYDQLMFLLWKNFLPLTLALCMWYVSMPILASGI-P-PQT--MNP-LAHLIISFTILTGTMITILSSHWFLAWMGLELNMLAIVPILAKSTNPR-STEASTKYFLIQATASMILLVSIFLNNLLTQQW--TINPPYNQMLSTMMFIALAMKMGMAPLHFWFPEITQGIPLIPAMIILTWQKLAPMSILLQIFPSTNLNLILTI-SVLSVMIGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYDPHITMLTLIIYIFLTISTLMIFYLTSNVTTLSL---SHTWNKLAWTMPIIPLMMMSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLLMALLTLMNLYFYMRLMYSISMTMFPTSNNTKINW-QLNYMKPMPLL-------SPLVVSSTCLLPLTPLMLMI----MN-LILALMTNITLALLLITITFWLPQLNIYTEKHNPYECGFDPTTSAHLPFSMKFFLIAITFLLFDLEIALLLPLPWATQTNNLTLTMNMIFTLLIILALGLAYEWSQKG--LDWAE-MPFIYINVMLAYFMSLLGLLIYRSHLMSSLLCLEGMMLSLFIMITLTTFNMHFMLMYMMPLILLVFAACEAAVGLALLILVSNLYGLDYVQNLNLLQCMLKFIFPTIMMLPTMWLSKNYMMWINTMICSLLISMYAL-MLLHTPN-NSCNLS-LTFSSDSLTSPLLMLTAWLLPLMILATQQHLYNNPTPRKKLYISMLILLQISLIMTFSATELILFYILFETTLIPTLIIITRWGYQPERLNAGSYFLFYTLAGSLPLLITLLYYLNTLGSLSMLTMMINSNEML-ISW-----TNNVMWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMVRITPILNP-LTEMMSYPFIILSLWGMVMTS--SICLRQADLKSLIAYSSVSHMALVILAIMIQTPWSLTGAMMLMISHGLTSSLLFCLANSNYERIHSRTMMFTRGLQTLFPLLALWWLLANLANLALPPTINLMGELLTILASFSWSNFTIMFTGFNMLITALYSLHMFTSTQRGPLTYSTSSIKPLFTRENVLMMMHLMPILLLTMNPKMIMGLTP--------MYSSM-IMLTVIPLLVPILMT---MINLHKS-LLYPYYVKLA-IIYALIASILCMAMYIFTGQELMISNWHWTTIQTIKLSLSFKMDFFSTMFTPVALFVTWSIVEFSTWYMSSDPNINQFLKYLLIFLITMLILITANNLFQLFIGWEGMGIMSFLLISWWYGRTDANTAALQAILYNRIGDIGFILAMTWFFLYHNSWDFQQMFMLDYT-PNSFPLTSLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLIIRFYPLMENNQFIQTMALSLGAITTLFTAICALTQNDLKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLSAGSIIHSLNNEQDIRKMGGLFKMLPFTSSSLVIGSFALMGMPFLTGFYSKDLIIETANTSYTNAWALTTTLVATS-ITAMYSIRIIYFTMTGHPRFMTLTPINENNPMLINPINRLAIGSIFAGFLISNCVAITSHPQVTMPYYLKLTALSVTVLGLMTATELSLMTNNMK--LSTPLKTFYFSNMLGFYTITTHRLNPHSSLNMSQNITSTLLDLFWLEKSMPKMTMQTQISMST--TSTTQKGLIKLYFLS---FFIPP--TLALLLTI----------------- +>Trachypithecus_obscurus_Dusky_leaf-monkey +----MNENLFTPFTTPT-LLSLPAVVPIILFPTLLFPTSK-HLVNNRLITIQQNLTQLILKQMMMIHNTKGRTWSLMLMALIIFIATTNLLGLLPHSFTPTAQLSMNLAMAIPLWAGTVITGLRFKTKSSLAHFLPQGTPTLLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGSAVLALST-INFLVTSLTFVLLLLLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFITIMTML-PALYLIMQLKLLNTNYYL-PPTQK-TPNTQMF-NNS-W-QLKWTKIYLP-HL-QPQHS---MFINRWLFSTNHKDIGTLYLLFGAWAGTVGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNLSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSAAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQACAKAHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSTGSFMSMVAMLLMIYMIWEAFASKRKVLSIEQPAYNLEWLHGSPPPYHTFDEPTFIKV-K--------MAHPVQLGLQDATSPIMEELIAFHDHAFMIVSLISFLVLYILLSVLTTKLTSTNITDAQEMETIWTILPAIILVLIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAIPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGAFSALLMTSGLIMWFHFYSTTLLMLGLLTNMLTMYQWWRDIVRESTYQGHHTTPVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPHLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKQMIQALLITILLGIYFTLLQMSEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTVCLIRQLLYHFTSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTPLRKSNPIMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLTETWNIGIALLLMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSIDNPTLTRFFTLHFTLPFIIATLTALHLLFLHETGSNNPCGIPSNSDKIPFHPYYTIKDILGLIFLLLILMTLVLFSPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPVLHKSKQQSMAFRPLSQFLLWLLITTLLTLTWIGSQPVNQPFIMIGQVASMLYFTTILILMPLASLIENNLL---KWT-------MF--------TMNIMLVTLPVIAAMAFLTLTERKLLGYMQLRKGPNIVGPYGLLQPFADAVKLFTKEPLKPSTSTTTLYVIAPALAFTIALLLWMPLPMPNSLINLNLGLLFILATSSLAVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSILLMSGSFNLHTLITTQEHLWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNTEYAAGPFALFFMAEYMNIIMMNALTATIFLGTLYPIHSPELFTTCFITKTLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLAFLMWYISISIMTSGI-P-PQI--MNP-LAQLIIYSTMFMGTITTLLSSHWFLAWAGLEMNTLAFTSILIKKTNSR-STEAATKYFLVQSTASMILMMAIVHNNLSPEQW--TMMSNINQPSSLAMTMALAMKLGMAPFHFWIPEVTQGTPLIPGLLLLTWQKLAPISIMYQIHSSINTNILLIL-SILSIMVGSWGGLNQTQLRKILAYSSITHMGWMMTTLTYNPDITIFYLLTYIVLVTTAFLALNLNSNTTTLTL---SHTWNKLTWLMPLMSSTLLSMGGLPPLTGFLPKWITIQELTKNSNFIMPTIMVTMTLLNLYFYLRLVYTTSMTLLPASNNTKMKW-QFENTKTTLLI-------PPLFILTTFLLPMSPTILTIP---MN-LVLALTINILLTLLLMIIMFWLPSLNSYAEKANPYECGFDPLNSARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPVMIKSSMMLIIILTLGLAYEWTQKG--LDWTE-MPIIYMNIMLAFLISLLGMLFYRSHLMSSLLCLEGMMLSLFIMSTLMALNMHFPLANIVPIALLVFAACEAAVGLALLVSISNTYGLDYIHNLNLLQCMLKMILPTIMLLPTTWFSKNSMLWINLTMHSLVISLIPL-MFFNQTNNNLTTYS-TYLSSDPLSTPLLTLTAWLLPLMIMASQYHLHNESPLRKKLYLSMMIFLQISLIMTFMSTELILFYISFEATLIPTLIIITRWGNQAERLNASTYFLFYTLAGSLPLLIMLVFTYNNMGSLNIVLLTLTAQELT-TTW-----SHNLTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLASILNP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIMASLIQTPWSFTGAIILMIAHGLTSSMLFCLANSNYERTHSRIMLLSRGLQILLPLMAFWWFAANLTNLALPPTINLIGELLVMTTSFSWSHVTIMFTGLNMLVTALYSLYMFTTTQRGALTSHIMNMKPSFTRENMLMFMHISPILLLSLNPNIIMGFTS--------MHASI-IMLTLTYLMLPIIIT---LIKPNKN-HLYPNYVKTI-MMFAFVFSLFPMTLYILLDQDMIISNWHWTTIQSLELTLSFKLDYFSMMFTPIALFITWCIMEFSLWYMGSDPNINQFFKYLLIFLITMLILITANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAAIQAILYNRIGDIGFVLTMAWFLLHYNSWDLQQMFILNSS-PNLLPLMGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNMLIQSLTLCLGAITTLFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLTIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALSTTLIATS-LTSAYSTRTIILALTGQPRFSTSTHINENNPALLNPMKRLTLGSLLAGFLITNNIFPTTPPQLTMPHYLKLLALCVTILGFLMALDLTLMTNNLK--MNIPSHMFKFSNMLGYFPTTIHRMIPYQNLMMSQNLAFILLDSIWLEKSMPKTISHINIITSI--TMTTQKGMIKLYFLS---FLIPL--ILVALLTV----------------- +>Trachypithecus_francoisi_Francoiss_langur +----MNENLFTPFTTPT-LLTLPAVVPIILFPTLLFPTSK-HLVNNRLITIQQNLIQLILKQMMMIHNTKGRTWSLMLMSLIIFIATTNLLWLLPHSFTPTAQLSMNLAMAIPLWAGTVITGLRFKTKNSLAHFLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGSAVLALLT-INFFATSLTFVLLLLLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFITIMTML-PALYLIMQLKLLNTNYYL-NPSQK-IPNMQTF-NNP-W-QLKWTKIYLL-HL-QPQLS---MLINRWLFSTNHKDIGTLYLLFGAWAGTVGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNLSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSAAMLWALGFIFLFTVGGLTGIVLASSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQICAKVHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSTGSFMSLVAMLLMIYMIWEAFTSKRKVLSIEQPTYNLEWLHGSPPPYHTFDEPAFIKV-K--------MAHPVQLGLQDATSPIMEELIAFHDHAFMIVSLISFLVLYILLSVLTTKLTSINITDAQEMETIWTILPAIILVLIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAIPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGAFSALLMTSGLIMWFHFYSMILLMLGLLTNMLTMYQWWRDIVRESTYQGHHTMPVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPHLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMETNRKQMIQALLITILLGTYFTLLQMSEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTVCLIRQLLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTPLRKSNPIMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSATPYIGTNLVQWVWGGYSIDNPTLTRFFTLTFTPPFIIATLTALHLLLLHETGSNNPCGIPSNSDKIPFHPYYTIKDILGLIFLLLILMTLVLFSADLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAIMRSVPNKLGGVLALLLSILILAIMAVLHNSKQQSMAFRPLSQFLLWLLITTLLTLTWIGSQPVNQPFIMIGQVASMLYFTTILILMPLASLIENNLL---KWT-------MF--------TTNILLVTLPAIVAMAFLTLTERKLLGYMQLRKGPNIVGPCGLLQPFADAMKLFTKEPLKPSTSTTTLYVIAPALAFTIALLLWVPLPMPNSLINLNLGLLFILATSSLAVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSILLMSGSFNLHSLITTQEHLWLLLPSWPLAMMWFTSTLAETNRAPFNLTEGESELVSGFNTEYAAGPFALFFMAEYMNIIMMNALTTTIFLGSLYPIHSPELFTTCFITKTLLLTSLFLWIRATYPRFRYDQLMYLLWKNFLPLTLAFLMWYISISIMSSGI-P-PQI--MNP-LAQLIIYFTMFMGTIITLLSSHWFLAWMGLEMNMLAFTSILIKKTNSR-STEAATKYFLVQSTASMILMMAIMYNSLFPEQW--TMMNNINQSSSLVMMMALAMKLGMAPIHFWVPEVTQGTPLIPGLLLLTWQKLAPISIMYQIHSSINTNILLIL-SSLSIMVGSWGGLNQAQLRKILAYSSITHMGWMMTTLTYNPDITIFYLLTYIVLVTTAFLALNLNSNTTTLTL---SHTWNKHTWLMPLMSSTHLSMGGLPPLTGFLPKWITIQEVTKNSNFIMPTIMVTMTLLNLYFYLRLVYTTSMTLLPASNNTKMKW-QFENTKTTLLI-------PPLFILTTFLLPMAPTILTIP---MN-LVLALTINTLLTLLLMIIMFWLPLLNPYAEKADPYECGFDPLNSARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPVMIKSSMMLIIILTLGLAYEWTQKG--LDWTE-MPIIYMNIMLAFLISLLGMLIYRSHLMSSLLCLEGMMLSLFIMSTLMALNMHFPLANIMPIALLVFAACEAAVGLALLVSISNTYGLDYIHNLNLLQCMLKMILPTIMLLPTTWFSKNSMLWINLTMHSLIISPIPL-LFFNQTNNNLLNHS-TYLSSDPLTMPLLTLTAWLLPLMIMASQYHLHNETPSLKKLSLSTIVSLQISLILTFVATELIMFYILFETTLIPTLIIITRRGSQAERLNASTYFLFYTLAGSLPLLIMLIYTYNNLGSLNTMLVTLMAKKLA-TTW-----SHNLTWLGCMVAFMVKMPLYGLHLWLPKAHVEVPIAGSMALVAVLLKLGGYGMMRLTSILNA-LTEYMAYPFLVLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIMASLIETPWSFTGAIILMIAHGLTSSMLFCPANSNYERTHSRIMLLSRGLQTLLPLMAFWWFAANLTNLALPPTINLIGELLVMATLFSWSHITIMLTGLNMLITALYSLYMFITTQRGTLTSHIMNMKPSFTRENMLMFMHISPIILLSLNPNIIMGFTS--------MHASI-VMLTLTYLTLPIIIT---LIKPNKN-HLYPNYVKTI-MMFTFIFSLFPMTLYILLDQDMVISNWHWTTIQSLELTLSFKLDYFSMMFTPIALFITWCIMEFSLWYMSSDPNINQFFKYLLIFLITMLILITANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAAAQAILYNRIGDIGFVLAMAWFLLHYNSWDLQQMFILDSN-PNLLPLMGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENSMLIQSLTLCLGATTTLFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKMMPITSTSLTIGNLALTGMPFLTGFYSKDLIIETANTSYTNAWALSTTLIATS-LTSAYSTRTIILALTGQPRFSTSTHINENNPALLNPMKRLTLGSLLAGFLITNNIFPTTPPQLTMPHYLKLLALCVTILGFLMALDLTLMTNNLK--MYTPSHMFKFSNMLGYFPTTIHRMIPYQNLIVSQNLAFILLDSIWLEKSMPKTISHIHATTSI--TMTTQKGMIKLYFLS---FLISL--ILVTLLTV----------------- +>Lepus_timidus_Mountain_hare +----MNENLFSSFITPT-MMGLPIVILIIMFPTLLFPAPT-RLINNRLVSAQQWLAQLILKQMMMMHSPKGRTWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGAALALIS-ISPTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLVTIIAMI-LTLFALIQLKFHKYSYPL-NPTPK-TLKPTSF-PSP-W-ETKWTKIYSP-LL-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDQTWAKIHFTVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMVMIFMIWEAFASKREVETVELTTTNLEWLHGCPPPYHTFEEPAYVKA----------MAYPFQLGFQDASSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLNPGDLRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLISTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSLSMI----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSPSLLLIGLLTNTLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIKPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMQQALAITILLGIYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCLLRQLHFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNHSLIDLPAPSNISAWWNFGSLLGLCLMLQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWLIRYLHANGASMFFICLYMHVGRGIYYGSYTYLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMIHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDLLGFLVLILLLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIIPFLHMSKQRSMMFRPISQVLFWILVADLLTLTWIGGQPVEHPFITIGQVASILYFSIILILMPLASLIENKIL---KW--------MF--------LINTFLLILPVLLAMAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLRPLTSSSLLFIIAPTLALTLALSMWLPIPMPYPLINLNMGVLFILATSSLAVYSILWSGWASNSKYALFGALRAVAQTISYEVTLAIILLCVLLMNGSFTLSSLITTQEYMWILFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNIIMMNALTAILFLGSFHSHTNPEMFTINFATKTLLLTMMFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWYISMPIMLSSI-P-PHM--MNP-LIFSIILFTLFLGTMITMFSSHWLTMWIGLEMNMLAIIPILINKATPR-STEAATKYFLTQATASMILMMAITLNILDSGQW--TLINPQNNFTPIMIMLALIIKLGMAPFHFWVPEVTQGVPLKSGLILLTWQKLAPLSILYQISPSIDSTMMMLV-AILSIMVGGWGGLNQTQLRKILAYSSIAHMGWMAAIITFNPNTMILNLIIYILLTIPMFMMFIQHTNTTTLSL---SQMWNKTPLMVTAILITLMSLGGLPPLTGFIPKWIIIQELTKNGNIIMPTMMAMLALLNLYFYLRLIYSSSLTMFPTTNNLKMKW-QFEPMKRMTFI-------APLIILSTMFLPLTPMLSVLN---MN-LILVLLINMSISLILVTIAFWLPQLNIYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAAQFNNLNLVLIMALMLISILALGLAYEWIQKG--LEWVE-MPSIYVNIFLAFIFALLGMLVYRSHLMSSLLCLEGMMLSLFILITLTALNMHYTLSFMFPIVLLVFAACEAAIGLALLVMVSNTYGMDYVQNLNLLQCMLKTIIPTIMLIPTVWWSKNHMIWINATIYSLLISLTTF-LLLNQPNDTNLNLS-TTFFSDALSTPLLMLTVWLLPLMILASQHHLSKESLLRKKTYISLLISLQIFLVMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLLVALIHLQNSMGSLNFLLIQLSNESLP-TSW-----SNSLMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITILLNP-ITEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERVHSRTMLLARGLQTILPLMAAWWLLASLTNLALPPTINLLGELLIVMASFSWSNLTIILMGTNVLITALYSLYMLSTTQRGKFTYHTNNISPTFTRENTLMMLHLAPLLLLSINPKIILGPML------MNLFSTS-MAVSIIILVLPIMAS---FTNIFNH-NNYPYYVKTS-VSYAFMISLIPTLIFIISNQETMVSNWHWMTIHTLKLTTSFKLDYFSMLFTPIALFVTWSIMEFSMWYMHSDPKINQFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFIMAMAWFAINLNTWEFQQMFMSDNN-VTILPLIGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLLENNKTAQTLILCLGAITTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKTLPFTSSALTIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALIITLIATS-LTAVYSTRIIFFALLGQPRYPTLIIINENNSSLINSIKRLALGSIFAGFLITNLVTPNSIPQMTMPLYMKLTALFVTILGFTIAMELNQLSLHLK--MSTQSNSFNFSNMLGFFPATMHRLLPYVNLSASQNVATLLLDMTWTEKAIPKNISDIQILAST--SVSSQKGLIKFYSLS---FLISM--LLALFILA----------------- +>Cercocebus_chrysogaster_Golden-bellied_mangabey +----MNENLFTPFSTPM-VLGQPATIPIILFPMLLIPTSK-HLINNRLTTIQQNLTQFTLKQMMITHNTKGQTWSLMLMSLIIFITMTNLLGLLPYSFTPTTQLSMNLAMAIPLWAGTVITGLRLKTKNSLAHLLPQGTPTPLIPMLVMIETISLLIQPVALAVRLTANITAGHLLMHLTGNAALALST-VSSSATLLTFTLLMLLTILEIAVALIQAYVFTLLTSLYLHNNTMPQLDTSTWFTTITTML-PTLYLIMQLKLLNMNYHR-PPFTK-NPNPQTH-NNY-Q-QSKWTKIYLP-HS-QLQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGVMGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTMLEAGAGTGWTVYPPLAGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGANIKWSPAMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLNQTCAKVHFIIMFMGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSYISLVAVILMIYMIWEAFTSKRKMLLIEQPSTNLEWLNGCPPPYHTFEEPTYIKL-NEKGESRTPMAHPAQLGLQDATSPVMEELITFHDHALMAMSLISLLVLYALFSTLTTKMTNTNITDAQEMEIIWTILPAIILVLIAFPSLRILYLTDEVNNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQLHAYHMVKPSPWPLTGALSALLMTSGLIMWFHFYSTTLLMLGLLTNSLTMYQWWRDIVRESTYQGHHTMSVQKGLRYGMTLFIISEVFFFMGFFWAFYHSSLAPTPHLGGYWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMSSNRKQTTQALLITISLGIYFTLLQASEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLFVCLIRQLLYHFTSNHHFGFEAAAWYWHFVDVIWLFLYISIYWWGS--MIPTRKSNPIMKMINQSLIDLPTPSNISMWWNFGSLLATCLILQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWTIRYLHANGASMLFICLFLHVGRGLYYGSYLLLKTWNIGITLLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGVDIVQWIWGGHAIGNPTLTRFFTLHFTLPFIMVALTVVHLLFLHETGSNNPCGISSNSDKITFHPYFTIKDILGLALLLPILMTLVLFSPDLLSDPDNYTPANPLNTPLHIKPEWYFLFAYAILRSIPNKLGGVLALFLSILILAIIPMLHKSKQQSMMFRPLSQLLFWLLITTLLTLTWIGSQPMVQPLITIGQVASMIYFITILILMPLTSLIENNLL---KWT-------MT--------TMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNVVGPYGLLQPFADATKLFTKEPLKPSTSTTVLYITAPALAFSIALLLWIPLPMPNALVNFNLGLLFILATSSLTVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLNMLITTQEYFWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFLGTFYPIHSPELFTTCFTTKTLLMTSLFLWTRATYPRFRYDQLMYLLWKNFLPLTLALLMWNTSTPIAISSI-P-PQT--MNP-LAQLIIYTTMIMGTLITMLSSHWFLAWAGLEMNMLAFIPILIKKTNLR-STEAATKYFLMQSTAAMILMMGIISNTLLTGHW--MMTNYTSQLPSLMMTIAIIMKLGMTPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQIHMSVNTHILLTL-STLSIMVGSWGGLNQTQLRKILGYSSITHTGWTMMTLTYNPTITILYLIVYIILTTTMFLTLNLNSNTTTLML---SHTWNKSTHLTPLMASTLLSLGGLPPLTGFLPKWITIQELTMNDNFLVPSIMIAMTLLNLYFYMRLIYAISLTLFPMPNNTKMTW-QFENTKSTLLI-------PPLIITSTLLLPISPSILAIH---MN-LMLALTINTLLTLLLMIIMLWLPQLNSYAEKTNPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWALQTTNLPMMIKSSMAFIIILILSLAYEWTQKG--LDWTE-MTPIYMNIALAFTISLLGMLTYRSHLMTSLLCLEGMMMSLFMMMTLIASNTHSPLINIMPIILLVFAACEAAVGLALLISISNTYGLDYIQNLNLLQCMLKMIIPTTMLLPMTWLSKNNTIWINLTTHSLIISLIPL-LFFNQINNNLFSHS-TYLSSDPLTTPLLTLTAWLLPLMIMASQHHLHNEPHSQKKLYLSMMIFLQITLVLTFMATELIMFYILFETTLIPTLVIITKWGNQAKRINASTYFLFYTLAGSLPLLIMLIYTHNNTGSLNTPLLTLTDQKLT-TTW-----SHSLTWLACMMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEYMAYPFLMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIMATLIQTPWSFSGAIILMIAHGLTSSMYFCLANSNYERTHSRIMLLSRGLQILFPLMTFWWFTANLTNLALPPTINLLGELFTIAASFSWSHITITLTGLNMLITALYSLHMFITMQRGALTHHMTNMKPPFTRENTLMLMHLAPIILLSLNPSIIMGFTP--------MPASI-MMTTLTSLTLPIVAT---LINPNKK-HSYPNYVKTT-VMYAFITSLFPTTLYIFSNQETIIWSWHWMMTQTLDLTLSFKLDYFSMMFIPIALFITWSIMEFALWYMNSDPNINQFFKYLLIFLIAMLVLVTANNLFQLFIGWEGVGIMSFLLISWWYARTDANTAAIQAILYNRIGDIGLILAMAWFLLHYNSWDFQQMLALNSN-SNLLPLTGLLLAAMGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNTLIQNLMLCLGATTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFMHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLTIGNLALTGMPFLTGFYSKDLIIEATNTSYTNAWALSITLIATS-LTSAYSTRTIILTLTGQPRFPALTNINENTPALLNPIKRLTMGSMITGFLITNSIPPTSLPQPTMPLHLKLSALYATALGFLMALDLTLMTNNTK--MKTPSQMFKFSNMLGYYPTTIHRTIPYQNLLTSQNLALLLLDSMWLEKSMPKTISQTHITAST--TVTSQKGMIKLYFLS---FLIPL--VLTMLLMM----------------- +>Lophocebus_aterrimus_Black_crested_mangabey +----MNENLFTPFSTPT-ILGQPATIPIIMFPTLLIPASK-HLIDNRLITIQQNLIKLTLKQMMMPHSAKGQSWSLMLMSLITFITVTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTIIAGLRFKTKSSLAHILPQGTPTPLIPMLVVIETISLLIQPMALAVRLTANITAGHLLMHLIGNTMLTLLT-ISLSATLLTSMLLTLLTILEIAVALIQAYIFTLLVSLYLQNNTMPQLDTSAWFTIIMTML-PTLYLITQLKLLSANYHQ-PPSQK-NPNLQTH-NIH-W-QPKWTKIYSP-HS-QPQQS---MLINRWLFSTNHKDIGTLYLLFGAWAGVMGMALSLLIRAELGQPGNLLGNDHTYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTVVEAGAGTGWTVYPPLSGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLNQTYAKTHFIITFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGAFISLTAMILMIYMIWEAFASKRKVLLMEQPSTSLEWLNGCPPPYHTFEEPVYIKL-NEKGESRTPMAHPVQLGLQDATSPVMEELVTFHDHALMAMFLISFLILYALSATLTTKLTNTNITDAQEMETIWTILPAVILVLIALPSLRILYMADEVNNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTMFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQLHAYHMVKPSPWPLTGALSAFLLTSGLAMWFHFYSSILLTLGLLTNALTMYQWWRDIIRESTYQGHHTAPVQKNLRYGMMLFITSEVFFFAGFFWAFYHSSLTPTPHSGCHWPPTGITPLNPLEVPLLNTSVLLASGITITWAHHSLMNSGRKQTIQALLITILLGTYFTLLQISEYFEAPFTISDGIYGSTFFVTTGFHGLHVIIGSTFLLICLIRQLSYHFTSNHHFGFEAAAWYWHFVDVIWLLLYISIYWWGS--MTPMRKSNPIMKTINRSFIDLPTPSNISVWWNFGSLLATCLILQIITGLFLAMHYSPDTSSAFSSIAQITRDVNYGWIIRYLHANGASMLFICLFLHVGRGLYYGSYLLLKTWNTGIVLLLMTMTTAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTDLVQWIWGGPAIDNPTLMRFFTLHFTLPFGIVALTAVHLLFLHETGSNNPCGISSDSDKITFHPYYTIKDILGLILLLFTLMTLTLLSPDLLSDPDNYTPADPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIIPMLHKSKQQSMMFRPLSQFLFWLLVTTLLTLTWIGSQPVTQPFITIGQVASMMYFTTILILMPLAAQIENNLL---KWA-------MT--------TMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNVVGPCGLLQPFADAMKLFTKEPLKPSTSTTILYITAPALAFSIALLLWTPLPMPNPLINFNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQMISYEVTLAIILLAVLLMSGSFNLNMLIATQEHLWLILPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYSAGPFALFFMAEYMNIIMMNALTTTIFLGTSYPIHSPELFTTCFTIKTLLLTFLFLWIRATYPRFRYDQLMHLLWKNFLPLTLTLLMWSTSMPAATSNI-P-PQT--MNP-LAQLIIYTTVFMGTLITMLSSHWFLAWAGLEMNMLAFIPTLIKKTNPR-STEAATKYFLAQSTASMILMMAIISNNLLSGHW--TMTNHINQFSSLAMMIALAMKLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQIHPSINAYILLTF-STLSIAAGSWGGLNQTQLRKILGYSSITHTGWMMTTLVYNPAVTALYLIIYITLTTTMFLTLNLNASTTTLML---SNTWNKLTCLMPLMTSTLLSLGGLPPLTGFLPKWITIQELTMNNNFIIPTIMVTMTLLNLYFYTRLIYTISLTLLPTPNNTKMMW-QLENMKPTLLI-------STLTTISTLLLPISPLILSIP---MN-LMLALTTNTLLTLLLTITMFWLPQLNSYAEKASPYECGFDPLNPARIPFSMKFFLIAITFLLFDLEIALLLSLPWALQTTNLPMMIKTSTMFIIILILSLTYEWTQKG--LDWAE-MTPTYMNIMLAFTISFLGMMIYRSHLMASLLCLEGMMMSLFIMITLTTSNTHSPLTNIMPIIMLVFAACETAVGLALLISISNTYGLDYINNLNLLQCMLKMVIPTTMLLLMTWLSKNSMIWINSTLHSLTISLIPL-LFFNQTDNNLLNYS-TYLSSDPLTTPLLMLTAWLLPLMIMASQYHLRNEPPSQKKLYLSMMVFLQIALILTFMATELIMFYILFETTLIPTLIMITKWGNQTERLNAGTYFLFYTLAGSLPLLIMLMYTHNKTGSLNITLLTLMDQKLT-TTW-----SHNLAWLACMMAFMTKLPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRFTSILNP-LTEYMAYPFLMLSLWGMIMTS--LTCLRQTDLKSLIAYSSVSHMALVIMASLIQTPWSFSGATILMIAHGLTSSMYFCLANSNYERTHSRIMLLSRGLQILLPLMTFWWFMANLTNLALPPTINLIGELFVIAASFSWSKITMILTGLNMLITALYSLHMFITMQRGTLTHHMTNMKPPFTRENTLMFMHLAPTILLSLNPNTILGPTA------MAMCTSI-MMMTLTSLTIPIFTT---LISPNKT-HLYPNYVKTA-VMYAFITSLIPTTLYIFSNQETTICSWHWMVTQTLDLTLSFKLDYFSMMFIPIALFITWSIMEFSLWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWHARTDANTAAIQAVLYNRIGDIGLILAMTWFLLHCNSWDFQQMLALNPS-PSLLPLMGLLLAAVGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNMLIQNLTLCLGAITTLFMAICALTQNDLKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFICSGSIIHSLNNEQDIRKMGGLFKTMPLTSTSLVIGNLALTGMPFLTGFYSKDPIIEATSTSYANAWALSTTLIATS-LTSAYSTRTILLTLTGQPRFPTLTNINENNPALLNPIKRLTMASMVVGFLITNNIPPTSPPQPATPLHLKLLALCMTTLGFIIALDLTLMTNKLK--VKTPSQMFKFSNMLGYFPITTHRAIPYQNLLMSQNLALLLLDSMWLEKLMPKTISQTHITAST--TVTAQKGMIKLYFLS---FLIPL--TLTLLLMM----------------- +>Eospalax_cansus_ +----MNENLLSPPPSHT-LMGIPVVIAIIMLPTIMFSHSN-RIYNNRLVVFQQWIVQMIIKQMMSIHSQKGRSWTLLLISLIIFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPLWAGAVILGFRNKTKSALAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLLS-INIPTALITFLILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFNMILFSL-ITLFIIFQLKFSKFNFYT-TPLSK-TIYMTKK-PNP-W-ESKWTKIYYL-LL-LPMH----MFVTRWLFSTNHKDIGTLYLMFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVVVTAHAFIMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFIHWFPLFTGYTLNDTWAKIHFATMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSMGSFISLTAVLIMVFIIWEALASKREVKSVELTTTNLEWLHGCPPPYHTFEEPVYVKV-N--------MAYPFQYGLQDATSPIMEELMHFHDHTLMIVFLISSLVLYIISLMLTTSLTHTSTMDAQEVEIIWTILPAVILVLIALPSLRILYLMDEINNPVLTVKTLGHQWYWSYEYTDYEDLNFDSYMIPTSELKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFEDWSMSMI----------MTHQTHAFHMVNPSPWPLTGAFSAFLLTSGLVMWFHFNSTTLLLMGLTTNLLTMIQWWRDVIREGTFQGHHTPVVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGKRLHMNQALLITILLGLYFTILQASEYFETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLLVCLLRQFNYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNMRKSHPLLKIINHSLIDLPAPSNISVWWNFGSLLGVCLGLQIFTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGMYYGSYNYLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGFIIMFLFLMILVLFSPDMLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILILLPMLHTSAQRSLMFRPISQCLFWILVADLFTLTWIGGQPVEHPFIIIGQLASILYFLIILVMMPLAGILENKIM---KISK------MP--------ILNVLLTLLPILIAMAFLTLAERKILGYMQLRKGPNIVGPYGVLQPFADAMKLFIKEPLRPLSSSMSLFIIAPTLALTLALSLWIPLPMPFPLANLNLGALFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSILLMSGSFSLSSLITSQESSWFLLSTWPLAFMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIILMNALSTIIFLSSLILPTLPELFTLNFMTKTLLLTILILWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISLPIILASI-P-PYM--MNV-LALIIILLTIFLGSLITILSSHLILMWAGLEMSMLAVIPALMYNSNPR-STEAATKYFLTQATASMIFLLAIILNYNNLGSW--EFHYNTEHYIFTLILLALMMKLGLAPFHFWVPEVTQGIPILSGLLLLTWQKIAPLAILFQIAYSINSTIVPLS-AIMSVFIGGWGGLNQTQLRKILAYSSIAHMGWMVAVTMYNPSMMLLNLIIYMFLTTSMFITIYINNSTSIASL---TKMWNKSPLMISTTLIILLSLGGLPPLTGFLPKWMIIIELTKNNCIFMALWMTMMALLNLYFYTRLIYASSMTMFPSTNNMKTNI-HQSNNKNNLFL-------SPLIIISSLALPLSPIINVLY---MN-LILALTTNIILASILVTVAIWLPQLNIYSEKAGPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWASQSNNLMTTLIMALVLIVILILGLLYEWLNKG--LEWTE-MSPVFLNLLLAFSLALLGTLLFRSHMMSTLLCLEGMMLSLFLMSSLISLNSQFPLAFIIPIIILVFAACEAAVGLALLVMVSNSYGTDYVQNLNLLQCMLKIVIPSIMMLPLTWLSKNSMIWINTTSHSFIISLITL-FTLNQHNDTSSNFS-TVFFSDPLSSPLIILTAWLLPLMLLASQNHLKKEPMTYKKTYISLLVTLQILLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALIHSHNLMGTMNFIILNIQQPTNS-SSW-----SNHIMWLAFMMAFMVKMPLYGIHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRISILTDP-INKTMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVMIQTPWSYMGATALMIAHGLTSSLLFCLANTNYERIHSRTMILARGMQTVLPLMGTWWMLGSLANLALPPSINLIGELVIITSSFSWANSTIILMGMNILITALYSLYMLISAQRGKTTCHTKNVSPSHTRESTIMALHILPTILLSLNPKFILGFPY------MNMSHSL-NFFILLTLMFPLLLS---FTKMIKP-VNLPKHVINS-IKLSFLMSLIPLMSFLLLNNEFMISNWHWMTLNSIKLNMSFKFDFFSTLFIPVALFVTWSIMEFSLWYMHSDPNLDRFMKYLLMFLMTMIILVSANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFILSMIWFCTNLNSWELQQIFATSPNPTNNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFFPLTNNNQTILTLMLCLGALTTLFTAICALTQNDIKKMVAFSTSSQLG--LMMVTLGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLAKPMPFTSSCLTIGSLALTGTPFLTGFYSKDLIIEAMNTSYTNAWALIITLIATS-LTAVYSTRIIFFVVMSKPRFPPVISINENNPQLKKAINRLALGSIFAGFLISKLIPPMNNPIMTMPLYLKMTALLVTILGFTIAMELNNLTFFLT--SKYSSSTHHFSSLLGFFPYTLHRLLPNVNLKISQNIISNLMDLIWLEKAIPKTIAHSNMLASM--KITNQKSLIKLYFLS---FLITI--TLIMLFQAT--------SYHEWFQ- +>Sylvicapra_grimmia_bush_duiker +----MNENLFASFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLVNNRLVSLQQWLLQLISKQMMSIHNPKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LALFIIFQLKISKHNFYL-NPELM-SMKASKQ-NTP-W-ETKWTKIYLP-LS-LPLWY---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLMLGLTTNLLTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYAYTETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGVLLLILALMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPTASTIENNLL---KW--------MF--------MINILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYLPELYTVNFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFFIILMTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASIKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLDLILTL-SVLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTVLILITLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMTVLSTMLLPLTPMLSILE---MN-LMLALLTNLALATLLVVIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLAVSLAYEWTQKG--LEWTE-MSLVFMNIMVAFTVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTMHSLLISLTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQNHLSKENLIRKKLFITMLILLQLFLIMTFAATELILFYVLFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIYIQNTTGSLNFLILQYWAQPMS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLLLNP-VTNFMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLLLLTIPIMMT---SSPTHKS-SNYPIYVKTT-ISYAFLISMIPTMMFIYTGQEAIISNWHWLTMQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFILAMAWFLANLNTWDLQQIFALNPN-NSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPYYLKMTALAVTILGFILALEISNMTHNLK--FNYPSSTFKFSNLLGYYPTIMHRLTPYLNLTMSQKSASSLLDLIWLENILPKTTSLIQMKMST--MITSQTGLIKLYFLS---FLVTI--LVSTILF----------SFHE---- +>Pontoporia_blainvillei_franciscana +----MNQNLFAPFMTPM-LLGIPVTLLVIMLPAMLLPTPN-QLINNRMISVQQWMIKLLTKQLMSTHNTKGQTWSLMLTSLFLFIALTNLLGMLPHSFTPTTQLSMNLGMAIPLWAGTVFAGFRNKTKMSLAHLLPQGTPTFLIPMLVMIETISLFIQPMALAVRLTANITAGHLLLHLIGSTVLALTN-INLLAASITFIILTLLTILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTISSMI-LTLFTLFQLKVSKHFHPS-TPKST-QTGLQKQ-QTP-W-NTKWTKIYLP-PS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLLGDDQIYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMVESGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSILITAMLLLLSLPVLAAGITMLLTDRDLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMISIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNSTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVKTVDLASTNLEWLNGCPPPYHTFEEPVYVNS-KRP------MAYPLQLGLQDATSPVMEELLQFHDHALMIVFLISSLILYIITLMLTTKLTHTSTMDAQEVETIWTVLPAFILILIALPSLRILYMMDEINDPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTPDLKPGELRLLEVDNRMVLPMQTTIRVLISSEDVLHSWAVPSLGLKTDAVPGRLNQTTLMSTRPGLFYGQWSEICGSNHSFMPIVLELVPLENFEKWSASMV----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLVMWFHFDSLILLSLSLLTNTLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPVGIQPLNPLEVPLLNTSVLLASGVTITWAHHSLMEGNRKQMLQALSITIALGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGTTFLIICFMRQMKFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKILNNAFIDLPTPSNISSWWNFGSLLGLCLIIQIMTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWLIRYLHANGASMFFICLYMHIGRGLYYGSYAFRETWNIGVLLLLAVMATAFWGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKVTLTRFFAFHFILPFIITALVMVHLLFLHETGSNNPTGISSNMDANPFHPYYTIKDILGALLMILTMLTLTLFTPDLLGDPDNYIPANPMNTPEHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILFLVPMLQTAKQRSMMFRPLSQLLFWILIADLLTLTWIGSQPVEQPYIIVGQLASALYFLLILVLMPTASLIENKLL---NW--------MF--------MVNILTLMLPILLAVAFLTLVERKILGYMQFRKGPNVVGPYGLLQPFADAIKLFTKEPLRPATSSPTMFIIAPMLALTLALTMWAPLPIPEPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLATTQEQMWLIFPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTAILFLGTSYDPQTPELYTTNLIAKTLLLTTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI-P-PSNM-MNP-IIFTTMVTTLIMSTVLVTISSHWLFAWVGLEMNMMAIIPIMMKTPTPR-ATEAATKYFLAQATASALLMLAIIINLICSGQW--TIMKMFNPTASTLMTMALAIKLGLSPFHFWVPEVTQGIPLTTGLILLTWQKIAPISILYQISPSINPNLMLTM-SLLSILVGGWGGLNQTQLRKIMAYSSIAHMGWMTTILLYNPTLTLLNLLVYLTMTLSMFMMMIQNMTTTTLSL---SQTWNMAPTMATLMMLTLLSMGGLPPFTGFMPKWMIIQELTKNKAIILPTFMAITALLNLYFYMRLAYSTALTLFPSMNNMKMKW-QFHTTKQMMFL-------PTLIVLSTMLLPLTPTLLALL---MN-LLLTLMANTTLALLLVLLAFWIPQSSTYPEKISPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTTNLKTTLVVILLLISLLAASLAYEWSQEG--LEWDE-MTLVHMNLLLAFAMSLTGLLMYRSHLMSALLCLEGMVLSLFILATITTLNSHFTLANMMPIILLVFAACEAAIGLALLVKISNTYGTDHVQNLNLLQCMLKFIIPTMMLMPLTWLSKDKFIWINTTMHSLLISFTSL-LLLNQLSDNSINCS-LMFFSDSLSTPLLILTMWLLPLMLMASQSHLMKEPFTRKKLYITMLVLLQTFLIMTFTATELTLFYIMFEATLIPTLIIITRWGSQTERLNAGLYFLFYTLMGSLPLLVVLMYMQNTLGSLNFLLMQYQAQPMA-NSW-----SSVFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILDP-LTKNMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVTTAILIQTPWSYTGAITLMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQMFLPLMVTWWLLASLANLALPPTINLIGELLVAMSTFSWSNPTIFLMGVNTVITALYSLYMLIMTQRGKQTPHINNITPSFTREHTLMALHMIPLLLLSLNPKIVMGLMY------MNLSTSF-TLLTLLVLTFPIMVS---TTNFYKS-NKYQLYVKNM-TFLAFITSLVPMMIFTYTNQEMLISNWHWITIQTLKLTLSFKMDYLSLTFMPVALFITWSIMEFSMWYMHSDPNINQFMKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTEANTAALQAILYNRIGDIGLLMSMAWFLSNSNTWDLQQMVVLNQN-ITNFPLMGLMLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNKLIQTMALSLGALTTSFTALCALTQNDIKKIIAFSTSSQLG--LMMMTIGLNQPHLAFLHICMHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPLTTTALITGCLALTGMPFLTGFYSKDLIIEAATSSYTNAWALLLTLTATS-FTAIYSARIIYFTLLEQPRFPPLMTINETNPMLTKPIKRLLAGSILAGFCLSNIIPPMTTPLMTMPLYLKLTAIATTISGFILALDINTYARNLK--YPYTSNHKNFSTLLGYFPTIMHRLPPYMGLTMSQKLATSLLDLTWTETMLPKTMALIQLKAAM--LTSNQKGLIKLYFLS---TLITI--TLTMVLL----------NYFE---- +>Moschus_anhuiensis_Anhui_musk_deer +----MNENLFASFITPM-ILGLPLATLIVMFPSLLFPTSN-RLINNRLLSLQQWMLQLVSKQMMGIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMILSMF-LTLFIIFQLKISKHNFFH-NPEST-LTKAQKQ-NTP-W-ETKWTKIYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFXVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTTTNLEWLNGCPPPYHTFEEPTYINS-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEIETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDXYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYMFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSSNPTGITSDMDKIPFTPYYTIKDILGVLLLILILMVLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILILMPLLHMSKQRSMMFRPLSQCLFWTLVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVMMPVASMIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSYTLSTLITTQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPYMPELYTINFIIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILSTIMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASIKYFLTQSTASMLLMMAIIINLMFSGQW--AVMKLFNPMATMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSCLILLTWRKLAPMSVFYQIFPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILPYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKAPIMTALALTTLLSMGGLPPLSGFMPKWLIIQEMTKNNSIIMPTFMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFSNTKQMTLL-------PTMTVMSTLLLPLTPILSVLE---MN-LMLALLTNFTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLILLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTTHSLLISLSSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQYHLSKENLTRKKLFITMLILLQLFLIMTFTATELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYIQNTVGSLNFLMLQYWVQPMP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMFLNP-TTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSSITIILMGVNMVITALYSLYMLIMTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNLFSSF-ALITLLLLTVPIMMT---SFNTYKT-INYPLYVKTT-ISYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLANLNTWDLQQIFMLNPE-NSNMPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSTMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGIPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPTTVPQMTMPYYLKMMALTVTILGFILALEINNLTQNLK--FNYPSNMFKFSNLLGYFPTIMHRLAPYLNLTMSQKSASSLLDLIWLENILPKTTSLIQMNMST--MVTNQKGLIKLYFLS---FLITI--LISIILF----------NFHE---- +>Neovison_vison_ +----MNENLFSSFITPT-MMGLPIVIIITMFPSIMFPSPT-RLINNRLISIQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTVTAMVTFTILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFVTILSMI-ITLFFMFQLKVSKYSFPE-NPEPK-SLTTSKS-TTP-W-ESKWTKIYFP-HS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGSINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVSTVELTSTNIEWLHGCPPPYHTFEEPTYVLS-K--------MAYPFQTGLQDAASPIMEELLHFHDHTLMIVFLISSLVLYIISVMLTTKLTHTSTMDAQAVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTIMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLTTSGLVMWFHHNSSFLLTLSMATNMLTMYQWWRDVVREGTFQGHHTPTVQKGLRYGMILFITSEIFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMIQALFITILLGLYFTILQTSEYYEAPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNYHFTSDHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLTKIINNSFIDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFVCLFLHVGRGLYYGSYMFPETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFVISALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALFLILTLTLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILVLAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFMILLVFMPIVSIIENNLL---KW--------MF--------MVNTISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFVMAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLVFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHTPYLPELYSINFTMKALLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASI-P-PQT--MKP-PILIIIMFTVVSGTMMVLMSSHWLMIWIGFEMNMLAIIPILMKKFSPR-AVEASTKYFLTQATASMLLMLGIIVNLLLTGQW--TVSSTLNSTASNMMTVALAMKLGLSPFHFWVPEVTQGVPLPSGMILLTWQKIAPLSILYQIYPSMNSHLLTTM-AITSVLIGGWGGLNQTQLRKILAYSSIAHMGWMIAVTTYNPTLTLLNLLIYITMTLGTFMLFSFNSSTTTLSL---SLMWNKLPLITSLILITMLSLGGLPPLSGFIPKWMIIHELTKNNMITLAMFMAMTALLNLYFYMRLTYATALTLFPSTNTMKMKW-QFENTKNTTLL-------SPLIVISTMLLPLTPMMSTLF---MN-MMLIMLINVSLASLLVTIAFWLPQLNIYTEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSINLKTTLTMALALVSLLAASLAYEWTEEG--LEWNE-MSMVYINIFLAFTLSFMGLLIYRSHLMSSLLCLEGMMLSLFVMMTITILINHLTLASMTPIILLVFAACEAALGLSLLVMISTTYGTDYVQNLNLLQCMLKIIIPTMMLIPLTWLSKPNMIWINMTAHSMLISLISL-TYLNQLTDNNLNFS-LLFFADSLSAPLLALTTWLLPLMIMASQHHLSKETLMRKKLYITMLIMLQLFLIMTFAATELIMFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVWIQNNLGTLNLLIIQYWAQPLL-NSW-----SNALLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLNP-LTNHMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAVLIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLVGELFVVMASFSWSNITIILMGINITITAIYSLYMMITTQRGKYTHHIKSIKPSFTRENSLMALHLLPLLLLSLNPKIILGPIY---MKVMNLFTSS-MLMTLFMLTIPIMMT---NTTMYTN-KLYPQYVKTT-ISYAFIISLIPTTVFLYSGQDTMISNWHWITIQTMKLSLSFKLDYFSMTFMPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFILAMAWFLINLNTWDLQQIFMINHE-NLTMPLMGLMLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTMQTTTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLVATS-MTAAYSTRIMFFALLGQPRFNPIITINENNPLLINSIKRLLFGSIFAGFLISNNITPTTTPQMTMPHYLKMTALTVTILGFILALELNLMMQSLK--FKYPSNLFKFSNMLGYFPTIIHRLVPMTNLLMSQKSASTLLDTIWLEKIMPKSISHFQMKSST--IISTQKGLIKLYFMS---FMLTL--TISLLAL----------NFHE---- +>Hexaprotodon_liberiensis_pygmy_hippopotamus +----MNENLFTSFITPT-MLGLPLAAMIIMFPSMLFPAPT-RLITNRLISIQQWLIQLVSKQMMNIHNHKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVIMGFRNKTKISLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLALMN-ISMATALVTFIILVLLTALEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTILSMF-LTLFVIFQLKISKHTYHP-NPGTT-LPMTQKQ-LTP-W-ETKWTKIYSP-LS-LPLQY---MFMNRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVVLMVFIIWEAFVSKREVLAVDLTTTNLEWLNGCPPPYHTFEEPAYVSL-TNQNK----MAYPLQLGFQDAVSPIMEELLYFHDHTLMIVFLISSLVLYIITLMLTTKLTHTNTMNAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMVPTSDLKPGDLRLLEVDNRVVLPVDLTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLQTFEKWTTSLL----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSLILLTTGLITNTLTMYQWWRDVIRESTFQGHHTPVVQKGLRYGMVLFIISEVLFFSGFFWAFYHSSLAPTPELGGCWPPTGISPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKQMLQALFITITLGVYFTLLQASEYYEASFTISDGVYGSTFFVATGFHGLHVIIGTTFLIVCFLRQLKFHFTSDHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIINDALVDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTPDTLTAFSSVTHICRDVNYGWAIRYMHANGASIFFICLFIHVGRGLYYGSYTFLETWNIGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAAVHLLFLHETGSNNPTGIPSNADKIPFHPYYTIKDILGVLLLMTMLLTLTLFAPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALIPMLHTSKQRSLMFRPLSQCLFWALIADLLTLTWIGGQPVEHPYIIIGQLASILYFLLILVLMPVAGIIENKLL---KW--------MF--------ILNTLMLIAPILLAMAFLTLVERKILGYMQLRKGPNVVGPYGLLQPFADAIKLFTKEPLRPSTSSISMFIIAPILALTLALTMWIPLPMPYPLVNMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEKLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFMAEYINIIMMNAFTTILFLGAYHNPYLPELYTINFTVKTLLLTMSFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPIMTSSI-P-PQT--MNP-FISIIIYTTIILGTMIVMTSSHWLLTWTGFEMNMLAIIPVMMKSPNPR-ATEASVKYFMTQATASMLLMLAVIINLLYSGQW--TVMKLLNPTASMIMTMALAMKLGLSPFHFWVPEVTQGIPLTAGLILLTWQKLAPLSILYQISPSINPNLILTM-SMLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILIYNPTMTILNLTIYLMTTFTMFTMFTLNSTTTTLSL---SHTWNKTPIITTLMLTILLSMGGLPPLTGFVPKWMIIQEMTKNDSIILPTLMAIMALLNLYFYMRLTYSTALTMFPSSNNMKMKW-QFETSKHKTLL-------PTMIILSTMLLPLTPMLVVLD---MN-LMMALLTNTALASLLVLIAFWLPQLNTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTTNLKTMLIMALTLISLLAISLAYEWTQKG--LEWTE-MSLVYMNIIMAFTASLMGLLMYRSHLMSSLLCLEGMMLSLFIMATLIILNAHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWMSKTNMVWTNTTAHSLLISFTSL-LLLNQFNDNSLNFS-PMFFSDPLSTPLLILTMWLLPLMLMASQSHLLKEPPTRKKLFITMLITLQTFLIMTFSAMELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALIYIQNITGSLNFLMLQYWTQAVP-NSW-----SNVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTILNP-LTEMMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELLVVMSSFSWSNITIILMGANITITALYSLYMLTTTQRGKHTHHINNITPSFTRENALMALHILPLLLLSLNPKIILGPLY------MDLFSST-TLTMLFVLTLPIMMT---NTNIYKN-DKYPTYVKNT-VSSAFLISLIPMITFASTGQEMIISNWHWITIQTLKLTLSFKADYFSIVFAPVALFVTWSIMEFSMWYMHSDPHINRFFKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAAIQAILYNRIGDVGFIMAMAWFLSNLNSWDLQQIFMINPT-HSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPMMENNNLMQTITMCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPFTTTALIVGSMALTGVPFLTGFYSKDLIIEAANTSYTNAWALLITLIATS-LTAVYSTRIIFFALLGHPRFPTSTPINENNPLLFNSLKRLLAGSIFAGFILSHNLPPTTTPLMTMPSYLKMTALAVTMLGFTLAFEITLNTQNLK--FKYPTNNFKFSTLLGYFPIIMHRLPPYLSLTASQKLASSLLDSAWLENILPKFTAHAQLKLST--LVSNQKGLMKLYFLS---FLITI--PLSLILF----------NSHA---- +>Rhizomys_sinensis_Chinese_bamboo_rat +----MNENLFSSFSTPT-LMGLPIVILIIFFPSIFLFKSN-RFMNNRLLSLQLWLTQMITKQMMLIHSPKGRSWTLLLTSLIIFIASSNLLGLLPHTFTITTQLSMNLGLAIPLWAGAVLLGLRHKTKTSLAHFLPTGTPIFLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGSATMALTS-INIPIASITFIILVLLTILELAVALIQAYVFTLLVSLYLHDNSMPQLDTSTWATMITFSL-ITLFSIFQPKLSNFNFLP-LPYFK-PKTLLPHPSHP-W-TMKWTKIYSP-LS-LPPHL---MFITRWLFSTNHKDIGTLYLMFGAWAGMVGTALSILIRTELGQPGALLGDDQIYNVVVTAHAFIMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFIHWFPLFSGYTLNDTWAKIHFAVMFVGVNMTFFPQHFLGLAGMPRRYSDYPDAYTTWNIISSMGSFISLTAVLIMVFMIWEAFASKREVQSVNATSTNLEWLHGCPPPYHTFEEPTFVKV-D--------MAYPLQYGLQDATSPIMEELMHFHDHTLMIVFLISFLVLYVIFAMLSTKLTHTSTMNAQEVETIWTILPAVILIMIALPSLRILYMMDEIYNPTLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTNELKPGELRLLEVDNRVVLPMDLPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLSSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKQFENWSAKMI----------MTHQTHAYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSTFLLITGLFTNILTMYQWWRDIIREGTFQGHHTPVVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTHELGGYWPPAGITPLNPFEVPLLNTAVLLASGVTITWAHHSLMEGHRSNMNHALSLTILLGLYFTILQASEYYETPFTISDGIYGSTFFMATGFHGLHVIIGTTFLLTCLFRQLNFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKSHPLMKIINHAFIDLPTPSNISVWWNFGSLLGICLIMQIITGLFLAMHYSSDTYTAFSSVAHICRDVNYGWLIRYIHANGASMFFICLFLHIGRGIYYGSYTFLETWNIGILLVFSIMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGPTLVEWIWGGFSVDKATLSRFFAFHFILPFIITALVMVHLLFLHETGSNNPTGLNSNADKIPFHPYYTIKDILGFIIMGLILVSLTLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLPLLHTSPMRSLTFRPLSQCLFWILVADLITLTWIGGQPVETPFILIGQVASVLYFSTLLIFLPLAGMLENKTM---KF--------MY--------FTNVILVTFPILLAMAFLTLTERKILGYMQLRKGPNIVGPYGILQPFADAMKLFIKEPLRPAASSISLFIFAPTLAITLALSLWIPLPMPHPLTNLNLGALFILALSSLAVYSILWSGWASNSKYSLIGAIRAVAQTISYEVTLAVIILSILTMNGSFSLTTLSYSQEQTWFIIPFWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTTIIFFGPSFYPQNPEFFTLEFITKTLLLTSLFLWIRAAYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPFIMANI-P-PYI------MIYTIIFITIFLGPVITITSTHLLIMWAGLEMSTLAMIPILLKTFNPR-AIEAAAKYFLTQSTASMILLLAIALNYHNLGIW--QLTPNTQQYIFYLILIALMIKLGLAPFHFWVPEVTQAIPILSGLLLLTWQKIAPLTILYNISYLTNPMIIPIT-AMLSILMGGWGGLNQTQMRKILAYSSIAHMGWMTAVSVFNPTMMILNLLIYMLLTISMFFTVHILSTTSITTF---SKMWNKSPLMIFTSLITLLSLGGLPPLTGFLPKWMIIVELTKNNSIFMALSMALMALLNLFFYVRLIYASSMTVFPSNNNIKSQT-HQNKQKYLFLL-------APLTIISSIALPISPLLINLY---MN-FLIALSTNLLLASILVVLAFWLPQLNIYTEKITPYECGFDPLGSARLPFSMKFFLIAITFLLFDLEIALLLPIPWALQSNNLTSTIMIALFLITILSLGFLYEWLYKG--LEWAE-MTPIFLNLILAFFLSLLGTLIFRSHMMSTLLCMEGMMLSLFLMISLASLNSQFTLSLIIPTTILVFAACEAAIGLALLVSISNTYGTDYVQNLNLLQCMLKIILPSLMLLPLAWFSKNKFIWVNTTSYSFLITLVSL-STINLNDNFSQNFS-LIMFTDSLSSPLLILTCWLLPLTLLASQNHLMNQPFNYKKTYICMLILLQNLLILTFSTSDLMLFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALIYTHNLLGTMNFILLNLQQTQIN-NMW-----PNHLLWLMFMLAFLVKMPLYGIHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRISILLDP-VNKNMAYPFILLSLWGMIMSS--SICLRQTDLKSLIAYSSVSHMALVIIAIMIQTPWSYMGATALMIAHGLTSSLLFCLANTNYERIHSRTLILAQGLQTMLPLLGVWWMLGSLANLALPPTINLVGELLIISSSFSWSNFTILFMGVNVLITALYSFYMIISSQRGKTTTHTKHMPPTLTRETMIASLHILPIILISMNPKLILGLPY------MFNIQSI-NFLILFILITPLIIS---IIQPNSP-LNSPKYIIYS-IKISFFLSLIPLLLYFSHNTEYIISNWHWMTINSMKLSLSFKSDYFSILFTPVALIVTWSITEFSLWYMHSDPNLNRFLKYLLMFLLTMIILVSANNLIQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLIISLAWFCMNLNSWDLQQIFLNFNSSPHLLPLCGLLLAAIGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFSPILSNSQTTLSLMLCIGALTTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFLCSGSIIHSLNNEQDIRKMGGLAKSMPFTTSCLIIGTLALTGIPFLTGFYSKDLIIESMNTSNTNAWALLITLIATS-LTAAYSTRIIFLVLTSKPRFPSISPINENNPKLIYPILRLALGSLIAGFLFSISIPPMNNPIMTMPLYIKLTALIITLLGFLIAMELYNFSLFLL--PKQPTPIHNFTSLLGFFPSIFHRLMPSLNLKMSQNIATNTLDLIWLEKAIPKSISSINIYAST--ITSNQKGLIKLYFLS---FLISM--FIPLFFLI----------------- +>Vulpes_corsac_Corsac_fox +----MNENLFASFATPT-MMGLPIVVLIVMFPSILFPSPN-RLINNRLISIQQWLIQLTSKQMLMIHNQKGRTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATMALIN-ISATTALITFTILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLVMILSMI-LTLFILFQLKVSKHYYPE-NPGLK-SIKSTSK-RTP-W-ENKWTKIYSP-LS-LPPQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVEMVELTTTNLEWLHGCPPPYHTFEEPTYVIQ-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLEMVPLSYFETWSAVMV----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHYNSMSLLTLGLTTNMLTMYQWWRDVVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSYTISDGVYGSTFFMATGFHGLHVIIGSTFLVVCFMRQLHYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIVNDSFIDLPAPSNISAWWNFGSLLGVCLILQIMTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYVFMETWNIGIILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPSGMTSDSDKIPFHPYYTIKDILGVLLLLSVLMSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILALIPHLHTSKQRGMMFRPLSQCLFWLLTADLLTLTWIGGQPVEHPFIIIGQIASILYFTILLILMPIISIIENNLL---KW--------MF--------FINIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSMSMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEHMWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFRNPFLPELYSINFTIKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVALPIITASI-P-PQT--MKP-PILIIILATVMTGTMIVMLSSHWLLIWIGFEMNMLAVIPILMKKFNPR-AMEASTKYFLTQATASMLLMMGVTINLLYSGQW--MVSKISNPAASIMMTIALTMKLGLSPFHFWVPEVTQGISLSSGMILLTWQKIAPMSVLYQISPSINTDLMTLV-ALASVLTGGWGGLNQTQLRKIMAYSSIAHMGWMTAIIIYNPTMMFLNLSLYILMTLSTFMLFMLSASTTTLSL---SHTWNKIPLIASIILTLMLSLGGLPPLSGFIPKWMIIQELTKNDMIVVPTLMAITALLNLYFYMRLTYSTALTMFPSANNMKMKW-QFEHTKKTTLL-------PPLIIVSTMLLPITPMMSILD---MN-MMLTLMTNITLASLLVMIAFWLPQLNIYADKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLTTMLIMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYINIFLAFILSLMGMLVYRSHLMSSLLCLEGMMLSLFVMMSVTILNNHLTLASMMPIVLLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTTMLIPLTWTSKPNMIWINTTMYSLLISLISL-SYLNQPNDNTLNSS-LLFFSDSLSAPLLALTTWLLPLMLMASQFHLSKEPLIRKKLYISMLILLQLFLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALLYIQNSMGSLNFLMIQYWIQPLP-NSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-LTNLMAYPFMLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNITIILMGTNIIITALYTLYMLITTQRGKHTHHIKNIKPSFTRENALMILHLLPLLLLSIDPKIILGPIY------MNMFASC-MITALILLILPIIIT---STKLYKD-KSYPHYVKTA-TSYAFMISMIPAMMFIYSGQEMVISNWHWMTIQTMKLSMSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLVTMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMAMAWFLLHLNAWDLQQIFMSASD-NLNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQNLTIQTLTLCLGAVTTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSPNDEQDIRKMGGLFKALPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSNTNAWALLITLIATS-MTAAYSTRILFFALLGQPRFTPVISINENNPHLTNSIKRLLLGSVFAGYVISHSITPTTIPQMTMPHHLKMTALTVTILGFIPALELNLTMQGLK--FNRSSHYFKFSNLLGYYPAIMHRLAPKMSLSMSQKSASTLLDHIWLENVLPKSIALFQMKSST--LISNQKGLIKLYFLS---FMITM--ALSLSIL----------SYHV---- +>Petaurus_breviceps_sugar_glider +----MNENLFAPFITPT-ILGITTLPIIMCFPCLLLSSPK-RWLPNRILIMQIWLIRLVTKQMMVMHNKQGRAWTLMLMSLMLFIASTNLLGLLPYSFTPTTQLSMNIGMAIPLWLGTVVMGFRNKPKMALAHFLPQGTPTPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALSS-ISMTVSTITFTILFLLTILELAVAVIQAYVFTLLVSLYLHDNSMPQLDTSTWYMTISLMV-VALFCIYQLKMLNHSLTSITPQDEKPLH-HKI-QLP-W-DKKWTKIYLP-HS-SPLLS---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLTSSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPALSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNNLWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNVLSSIGSFISLTAVILMMFIIWEAFAAKREVQTVELTTTNIEWLYGCPPPYHTFEQPVYVKA----------MPYPMQLGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETIWTILPAVILVLIALPSLRILYMMDEIYNPYLTVKAMGHQWYWSYEYTDYEDLTFDSYMIPTQELTPGQLRLLEVDNRVVLPMELPIRMLISSEDVLHAWAVPSLGLKTDAIPGRLNQATLTSTRPGVYYGQCSEICGSNHSFMPIVLEMTTLKYFEKWSSMMQ----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNTHILMTIGFTCMLLTMYQWWRDIVREGTFQGHHTPVVQKGLRYGMILFIISEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQMIQALLITILLGLYFTILQAMEYYESSFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCMLRQFNYHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MMNLRKTHPLTKIINHSFIDLPAPSNISAWWNFGSLLGVCLMIQILTGLFLAMHYTSDTSTAFSSVAHICRDVDYGWLIRNLHANGASMFFMCLFLHVGRGIYYGSFLYKETWNIGVILLLTAMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALVIVHLLFLHETGSNNPSGIDPNSDKIPFHPYYTIKDLLGLALMLLTLLLLALFSPDMLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLIIPLLHTSKQRSLMFRPISQTLFWLLTANLLTLTWIGGQPVEQPYIIIGQTASITYFLLIIVLMPAAGLLENYMLK-PKW--------MY--------IMNLLLYIIPILLAVAFLTLIERKVLGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSLSMFILAPILALTLALTIWTPLPMPYTLLDLNLGLLFILALSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKNLITTQENMWLIISTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIMAMNAITTILFLGSSINPNFTHLNTMTFMIKTLILTLLFLWIRASYPRFRYDQLMYLLWKNFLPMTLAMCLWFISIPIALSCI-P-PQM--MSP-YILLIITTSLLLGTSLTLFSNHWLLAWMGLELNTLAIIPMMTHPNHPR-ATESAIKYFLTQATASMMIMFSIIYNAWMTNQW--TLLQMSDHTASTLMTMALAIKLGLAPFHFWVPEVTPGIPLSSGMILLTWQKIAPTALLYQISPSLNMEILILL-AILSTMLGGWGGLNQTQMRKVLAYSSIAHMGWTVIIALINPNLTILSLMIYIMTTLTLFMTLNLSSTTKIKSI---SNLWNKSTPMTMIVFLTMLSLGGLPPLTGFMPKWLILQELIINNNPTMAIIMALSALLNLFFYMRIIYVSSLTMFPTSNNLKHHW-FFSQTKTTNMI-------PTLTTISSMLLPLTPILIIMT--MIN-LMITLLINIALSTIIVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWAIQLPTPKSMLTLSYCLIILLTLGLAYEWTQKG--LEWTE-MMPISLSLTMAFSLALAGTLIYRSHLMSTLLCLEGMMLSLFILMAMLISHFHMFSMSMAPLILLVFSACEAGIGLALLVKISANYGNDYVQNLNLLKCMLKIILPTFMLIPLTWLSNSLWLWINSTSHSLLISLISL-LLLYHYSDLGYNYN-PSFYMDSLSSPLIVLSCWLLPLMMIASQGHLTKESMNRKKIYVTMLILLQLSLIMAFSSSEMIMFYILFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLVGSLPLLVALLQMYTNSGSLHIFMNSMLPQAMN-PSI-----SNSTLWFACMIAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITIFTEP-ITTNLYYPFIILSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMGLVIVAALMQSTLSFMGATTLMIAHGLTSSMLFCLANTNYERIHSRTLMLARGLQTALPLMCIWWLMASLTNLALPPTINLLGELKVIVASFSWSNFSIILLGLNTVITGLYSLYMFVTSQRGKFTHHLHPINPSFTREHTLMSLHLIPLMMLSINPKFILGITY------MKYLMNSTMLLAIFLLTLPLAHN---LMFPGHT-KQFPQYCKNM-VKLAFFTSLPALLLFINSGQESSITNWQWLSIGPLNMSMSFKLDYFSIMFIPIAFYVTWSILEFSLWYMHSDPYIHRFFKYLITFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWYGRTDANTAAIQAILYNRIGDIGLFLSMAWLMINNNSWDLQHIFMSHMN---SLALVGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMLETNSMALSITLCLGAMTTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLKILPITSSALITGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWGLTITMIATT-LTAVYSLRIIYFALLNEPRFTTMSPINENNPNLTNPIMRLAMGSIFAGFILTTNIPPTSMITMTMPPITKLSALLVTILGILISLELNSLTNKSP--MMTLIHTHHFSNMLGYFTHLFHRTTRLANLQMGQHIATMLIDLNWYEKTGPKSQTNLHNYMSK-SIVSTQKGLIKMYFMS---FIISM--LIILTIT------------------ +>Nandinia_binotata_African_palm_civet +----MNENLFSSFITPT-MMGLPIVVLIIMFPSILFPSPT-RLINNRLISLQQWLVQLTSKQMLAIHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVTTGFRHKTKASLAHFLPQGTPILLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTSVASITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLVTIISMI-MTLFIVFQLKISNYNYPW-NPEPK-SATLLKQ-PNP-W-EKKWTKIYSP-LS-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMIWEAFASKREVMTVELTTTNLEWLHGCPPPYHTFEEPTYVLS-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLMHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMATRPGLYYGQCSEICGSNHSFMPIVLELVPLTYFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTLLLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPFVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGVTPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLAKIINESFIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGMYYGSYTFSETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAAIHLLFLHETGSNNPSGIPSNSDKIPFHPYYTIKDILGLLILILMLMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIIPLLHTSKQRGMMFRPLSQCVFWFLVADLLTLTWIGGQPVEYPFIIIGQLASILYFSTLLILMPISGIIENNLL---KW--------MF--------IINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPLTSSMSMFIMAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLATLITTQEHMWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGSFALFFMAEYANIIMMNSLTTILFFGAFHNPYMPELYTTNFITKTLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIITASI-P-PQT--MKP-PILIIILSTVISGTMIVLTSSHWLLTWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMMGIIINLLYSGQW--TVSKNLHPMASTMMTIAMTMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKIAPLSVLYQISPSINTNLLMTM-ATMSVLIGGWGGLNQTQLRKILAYSSIAHMGWMIAIMTYNPTVMILNLMMYIMMTLTSFMLFIHTSATTTLSL---SHTWNKTPLITSFIFVLMLSLGGLPPLSGFIPKWMIIQELTKNEMIILPTLLAITALLNLYFYMRLTYATALTMFPSTNNMKMKW-QFERTKKMTLL-------PPLIIISTMLLPLTPMMSILD---MN-MILALTINTLLSSLLVLIAFWLPQLNIYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNYLSTMLTMALMLILLLATSLAYEWTQKG--LEWTE-MSAVYINIFLAFIMSLMGLLMYRSHLMSSLLCLEGMMLSLFIMMTMAILNNHFTLASMSPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTVMLLPLTWLSKPNMIWINSTAHSLLISLISL-TYLNQFNDNSLNFS-LLFFSDPLSAPLLALTAWLLPLMIMASQSHLSKETTTRKKLYITMLTLLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNTSGTLNFLIVQYWAQPIS-TTW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITVMLNP-LTNQMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLANLALPPTINLIGELFVVVASFSWSNMTIILMGINIIITALYSLYMLITTQRGKYTHHIKNIKPSFTRENALMTLHLLPLMLLSLNPKIILGPIH------MNLFTLS-TLTAMLMLLLPIIMT---NTQLYKN-SLYPYYVKTT-IAYTFTISMIPTALFIHSGQEMIISNWHWLTIQTLKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHADPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMAMAWFLSNLNAWDFQQIFITQHE-NLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGLNQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYAALPFTTSSLITGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLTTLIATS-LTAAYSTRIMFFALLGQPRFNSLILINENNPLLINSIKRLLIGSIFAGYLISYNIPPTTIPQMTMPHYLKLTALAVTIMGFILALELNLATQNLK--FDYPTNLFKFSNLLGYFPTIMHRLPPAMSLTMSQKSASMLLDMIWLENVLPKSISYFQMKTAT--MVSNQKGLIKLYFFS---FMITL--ALSLFAL----------NFHA---- +>Martes_flavigula_yellow-throated_marten +----MNENLFSSFITPT-MMGLPIVIIITMFPSIMFPSPS-RLINNRLISIQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVATGFRYKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTITAMVTFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-MTLFFIFQLKVSKYNFPE-NPESK-SVSTPKP-TTP-W-EKKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDIWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVLTVELTSTNIEWLHGCPPPYHTFEEPTFVLS-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLVMWFHFNSTPLLALGMTTNLLTMFQWWRDVVREGTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFTTISLGLYFTLLQASEYYEAPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSFIDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYTYPETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSRIPSDSDKIPFHPYYTIKDILGALFLILVLMVLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILVLAIIPLLHTSKQRGMMFRPLSQCLFWLLVADLLVLTWIGGQPVEHPFITIGQLASILYFAILLIFMPIISIIENNLL---KW--------MF--------MVNIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFVMAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEQLWLILPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHTPYLPELYSINFTMKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASV-P-PQT--MKP-PILTIIMSTVISGTIMVLISSHWLTVWIGFEMNMLAIVPILMKKFNPR-AMEASTKYFLTQATASMLLMLGIIINLLLTGQW--AVLNMPNPIASNTMTVALAMKLGLSPFHFWVPEVTQGVPLSSGMILLTWQKIAPLSILYQISPSTNPNLLMTM-AALSVLVGGWGGLNQTQLRKILAYSSIAHMGWMIAVTTYNPTLMMLNLAIYTMMTLGTFMLFMLNSSTTTLSL---SHVWNKLPLTTSLILMIMLSLGGLPPLSGFIPKWMIIHELTKNNMIIMATFMAITALLNLYFYMRLTYATALTMFPSTNIMKMKW-QFENTKNTTLL-------PPLIVISTMLLPLTPMMLSLF---MN-MMLTMLINVSLASLLVLIAFWLPQLNIYTEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSINLKTTLIMALALISLLALSLAYEWTEEG--LEWNE-MSMVYINIFLAFTLSFMGLLIYRSHLMSSLLCLEGMMLSLFVMMTVTILSNHLTLASMTPIILLVFAACEAALGLSLLVMISNTYGTDYVQNLNLLQCMLKIIIPTIMLIPLTWLSKPNMIWINTTAYSMLISLIGL-TYLNQFTDNNLNFS-LLFFADSLSAPLLTLTTWLLPLMLMASQHHLSKETLTRKKLYITMLVTLQLLLIMTFTATELIMFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLTALLWMQNNLGTLNLLVLQYWAQPLS-SSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-LTSSMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAY-SWAHMALVIVAVLIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQMLLPLMAAWWLLASLTNLALPPTINLVGELFVVMASFSWSNITIILMGINITITALYSLYMLITTQRGKYTHHIKNIKPSFTRENSLMALHLLPLLLLSLNPKIILGPIY---MKVINLFTSS-ILVTLLMLTLPIAMT---NTSLYIN-KLYPQYVKTT-ISYAFMISLVPMMIFLHLGQDTIISNWHWITIQTMKLSLSFKFDYFSMIFVPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMAMAWFLTNLNTWDLQQIFMTNHE-NLNIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKIMQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTLPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLVATS-MTAAYSTRIMFFALLGQPRFNPTITINENNPHLINSIKRLLFGSIFAGFLISYNITPTTTPQMTMPHYLKITALIVTILGFVLALELNHMMQCLK--FKYPSNLFKFSNMLGYYPIIIHRLMPKTNLLMGQKSASTLLDMTWMEKILPKSISHFQVKSST--TISSQKGLIKLYFMS---FMLTL--TLSLLTL----------NFHG---- +>Vicugna_pacos_alpaca +----MKENLFASFITPT-MMGLPIVTLVVMFPSMLFPTPT-RLINNRLISFQHWLIRLTSKQMMTIHNYKGQTWSLMLMSLIMFIGATNLLGLLPHSFTPTTQLSMNLGMAVPLWAGTVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLALMN-ISTLTALITFVVLILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSML-MTLFILFQLKLSKHIYYP-TPEPK-FSKTHKQ-NTP-W-ETKWKKIYLP-LL-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGLIHWFPLFSGYTIDDTWAKIQFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSVGSFISLTAVILMVFIVWEAFASKREVMTVELTATNLEWLHGCPPPHHTFEEPTYINL-K--------MPYPFQLGFQDATSPIMEELLYFHDHALMVVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPVLTVKTIGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEWDNRVVLTMGITIRMLVTSEDVLHSWAVPSLGVKTDAVPGRLNQVTLMSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFEEWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHYNSSLLLSLGLITNMLTMYQWWRDIIRESTFQGHHTPSVQKGLRYGMVLFIVSEVLFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRTHMLQALFITIALGLYFTLLQASEYYEAPFTIPDSVYGSTFFVATGFHGLHVIIGSTFLAVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLLKIVNNAFIDLPAPSNISSWWNFGSLLGICLIMQIMTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLYIHVGRGLYYGSYAFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTTLVEWIWGGFSVDKATLTRFFAFHFILPFVIAALAGVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGILLLMTTLLTLTLFAPDLLGDPDNYTPANPLSTPPHIKPEWYFLLPYAILRSIPNKLGGVLALALSILILALIPMLHTSKQRSLMFRPLSQCLFWALIADLLTLTWIGGQPVEHPFIIIGQVASILYFLLILVLMPVAGIIENKLL---KW--------MF--------MINILTLIVPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFTKEPLRPATSSITMFILAPILALTLALTMWIPLSMPQPLVDMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHMWMIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFMAEYANIIMMNAFTTILFFGAFHNPYMPELYTANFVLKTLLLTVTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPISTAGIPP-PQT--MNP-LIFSIILLTIMAGTLIVMISSHWLFIWIGFEMNMLATIPVLMKNFSPR-SMEASTKYFLTQATASMLLMLGVIINLLYSGQW--TTTKIFNQTSSIMITTALTMKLGLAPFHFWVPEVTQGIPLASGLILLTWQKLAPLSVLYQIAPSINSNMLLTM-SVLSIMIGGWGGLNQTQLRKIMAYSSIGHMGWMTAVMVYNPTMTVLYLLMYLTMTITMFMLFMINSTTTLLSL---SQTWNKTPVITTLILTVMMSMGGLPPLSGFAPKWMIIQELTKNDSIILPTMMAMMALLNLYFYMRLTYSTALTMFPSSNNMKMKW-QFENTKRMPSL-------PIMVVLSTMMLPLTPMMSVLY--MIN-LLLALLTNTTLASLLVLIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWATQTNYLHTMLIMALLLISLLAISLAYEWTQQG--LEWTE-MSMVYMNIMLAFTMSLIGLLMYRSHLMSSLLCLEGMMLSLFVMASLMILSTHFTLASMMPIILLVFAACEAALGLALLVMISNTYGTDYVQNLNLLQCMLKIIFPSIMLIPLTWLSKNSMIWINPTMYSLLISLISL-SLLSQYSDNSTNFS-LLFFSDALSAPLLVLTTWLLPLMLIASQSHLSKEPLTRKKLYITMLILLQVLLIMTFTASELIMFYILFEATLVPTLIIITRWGNQTERLNAGSYFLFYTLTGSLPLLVALVYIQNTVGSLNFLIMQYWNQPLM-DSW-----SNALLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTAMLNP-LTEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATTLMVAHGLTSSMLFCLANTNYERTHSRTMILARGLQTLLPLMAMWWLLASLTNLALPPTINLLGELFVIMASFSWSNITIILMGANMMITALYSLYMLIMTQRGNHTYHINNIKPTYTRENSLMALHMLPLLMLSLNPKVIMGFTY------MNMFTTL-ALLTLLLLTLPIMMS---TSDIYKS-KQYPLYVKDT-IACAFTVSLIPTMMFIHLNQEVIISNWHWITIHTLKLSLSFKMDYFSMMFVPIALFVTWSIVEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVASMAWFLSNLNTWEMQQIFILTQD-CPTAPLMGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNKTAQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKTMPFTTTALIIGSLALTGIPFLTGFYSKDMIIETANTSYTNAWALFITLVATS-LTAIYSTRIIFYTLLNQPRFPPLILINENNPLLINSIKRLLIGSIFAGYFISYNIPPMTVPQMTMPSHLKLAALLVTILGFILAMEINTMTKNLK--FTQPSKSFKFSNLLGFFPIIMHRLVPYLNLLMSQKSASVLLDLVWLEAALPKTLALMQVKAST--LVSDQKGLIKLYFLS---FLITL--TLIMILF----------NYPV---- +>Vombatus_ursinus_common_wombat +----MNENLFAPFITPT-IMGITTLPIIMIFPCIILSTPK-RWLPNRIQTLQIWLIRQITKQMLSMHNTRGRTWALMLMSLILFIASTNLLGLLPYSFTPTTQLAMNIGMAIPLWLATVIMGFRNKPKVSLAHFLPQGTPTPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALSS-ISMTVSTITFTILFLLTILELAVAMIQAYVFTLLVSLYLHDNSMPQLNTSTWSLTITLMV-ISLFCIFQLKMMNQTMTSIPPQEDKKLP-TKP-QLP-W-DKKWTKIYLP-HS-SLLQS---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLIGDDQIYNVIVSAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNMAHAGASVDLAILSLHLAGISSILGAINFITTIINMKPPALSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGADPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDTWAKIHFSVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTLWNVLSSIGSFISLTAVILMVFIVWEAFASKREVLTVELTTTNIEWLYGCPPPYHTFEQPVFVKT----------MPYPMQLGFQDATSPIMEELTYFHDHTLMIVFLISSLVLYVIILMLTTKLTHTSTMDAQEVETIWTILPAVILVLIALPSLRILYMMDEIYNPYLTVKAMGHQWYWSYEYTDYEDLTFDSYMVPTQDLSPGQFPLLEVDNRLVLPMELPIRMLISSEDVLHAWTVPSLGLKADAIPGRLNQATLTSTRPGVYYGQCSEICGSNHSFMPIVLEMTTLKYFEKWSSMMQS---------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSSLLLITGLTCMLLTMYQWWRDIVREGTFQGHHTPVVQKGLRYGMILFIVSEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQMIQALSITILLGLYFTILQAMEYYESSFTISDGIYGSTFFVATGFHGLHVIIGSTFLMVCLLRQFNYHFTSTHHFGFEAAAWYWHSVDVVWLFLYVSIYWWGS--MINLRKTHPLMKIVNEAFIDLPTPSNISAWWNFGSLLGICLIMQILTGLFLAMHYTSDTLTAFSSVAHICRDVNHGWLIRNLHANGASMFFMCLYLHIGRGIYYGSYLYKETWNIGVFLLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIVTALAIVHLLFLHETGSNNPSGINPDADKIPFHPYYTTKDIMGAILMILALLLLTLFSPDMLGDPDNFSPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLVIPFLHTSKQRSMMFRPISQTLFWILIANLLILTWIGGQPVEQPYIIIGQTASITYFLLILILMPAAGLFENYMLK-PKW--------MF--------IINLLLYIVPILLAVAFLTLVERKVLGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSISMFIIAPILALTIALTIWTPLPMPHTLIDLNLGLLFILALSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKNLIITQENMWLIVTTWPLAMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIMVMNAMTTILFLGSSLNHNFTHLNTLSFMTKTLALTLLFLWIRASYPRFRYDQLMHLLWKNFLPITLALCLWFISIPVALSCI-P-PQI--MSP-YVMLIISASLLLGTSLTLLSNHWFTAWMGLEINTLAIIPMMTYPNHSR-AAESAIKYFLTQATASMIMMFAIIYNAWMTNQW--TLFQISNQVASTLMTLALATKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKVAPTSIMYQISPSLNMKILITL-AILSTLLGGWGGLNQTHLRKILAYSSIAHMGWMVIIISINPTMALLNLLIYISATLTLFLSLNLTSTTKIKSL---ANLWNKSTPMTLIIMLTLLSLGGLPPLTGFMPKWLILQELVAHNNITMAMLMAFSALLNLFFYMRIIYTSALTIFPSTNNSKLQW-CYPQTKKITLI-------PLLTVISSMLLPLSPLFITLS--MIN-LIITLIVNSLLSTIIVLIAFWLPQLYLYMEKSSPYECGFDPLGSARLPFSLKFFLIAITFLLFDLEIALLLPLPWAVQLSNPNTMLILSYGLILLLTAGLAYEWLQKG--LEWTE-MTSISLNLIMAFSLALAGVLIYRSHLMSTLLCLEGMMLSLFILMALLISHFHMLSVSMAPLILLVFSACEAGVGLALLVKTSTDYGNDYVQNLNLLQCMLKILIPTFMLIPLTWWSKNPWLWINPTTHSLLISIFSI-MLLYHNSDLGYYYN-TAFSTDSLSGPLLVLSCWLLPLMMMASQSHLTKENSNRKKTYLTMLITLQLSLIMAFSSSELIMFYILFETTLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALLFMHNNLGSLHILTTTMMPNTLN-FSA-----PNSILWYACMIAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITIFTEP-ITMHLSYPFIILSMWGMVMTS--SICLRQTDLKSLIAYSSVSHMGLVIIAALMQSTLSFMGATTLMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMFAWWLLASLANLALPPTINLLGELTVIISSFSWSNFSIILLGLNTVITALYSLHMLTTSQRGKFTHHTYPIKPSFTREHILMALHLIPLLIISLNPKIILGITY------MNFMLNSMILLSIVILTLPLMIN---LAFPHKT-NHFPAYCKNA-VKLAFLTSLPPLILFVYADTSHHTTWSHHTSINTLNLSMSFKLDHFSIIFIPIAFYVTWSILEFSLWYMHTDPKIHQFFKYLITFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWYGRSDANTAALQAVLYNRIGDIGFMLTMAWLMINNNSWDLQHIFMTNMN---TLALLGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMMENNNTALTTALCLGATTTLFTAMCAITQNDIKKIVAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNNEQDIRKMGGLLHILPITSSALMTGSLALMGTPFLAGFYSKDSIIEAMNTSYINSWAMVMTLIATS-LTAIYSLRIIYFALLNQPRFPPMSPINENNPNLTNPITRLALGSIFAAFILTMNIPPTSMVPMTMPPALKLTALIVTIIGLIIPMELNLLINKLP--TTPMIHTDNFSNMLGYFTHLFHRMYPLANLQMGQHIATMLIDLNWYEKTGPKGQANLHNTTSS-YITSTQKGLIKTYFLS---FIITI--PAIFAMIT----------------- +>Neophocaena_phocaenoides_ +----MNENLFAPFVVPV-MLGIPITTLIIMFPALLFPTPN-RLITNRMVAIQQWLTKLTSKQLMITHNLKGQTWSLMLISLFLFIASTNLLGMMPHSFTPTTQLSMNLGMAVPLWAGTVVMGFRNKMETSLAHLLPLGTPTFLIPMLVMIETISLFIQPLALAVRLTANITAGHLLLHLIGSATLALTS-ISLPTALITFIILTLLVILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMI-FTLFALLQLKISKHLYSP-TPKPT-PTKMQEQ-QAP-W-NHTWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGSLIGDDQIYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSVVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDVILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWTKTQFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSAVDLTSTNLEWLNGCPPPYHTFEEPTYVNP-NIQE-----MAYPFQLGLQDATSPVMEELLQFHDHALMIVFLISSLVLYIITLMLTTKLTHTNTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMVLPMQMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLVMWFHFNSAILLTLGLLTNTLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPAGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHTLQALLITIMLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVVIGSTFLIICFMRQLTFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNALIDLPAPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTSTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYIHIGRGLYYGSYMFQETWNIGVLLLLMVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGSTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALMIVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGILLLILTLLTLTLFSPDLLGDPDNYVPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILVLVPMLQTSKQRSMMFRPFSQLLFWTLIADLLTLTWIGGQPVEHPYIIVGQLASILYFLLILVLMPTASIIENKLL---KW--------MF--------MVNILMLILPILLAVAFLTLVERKILGYMQLRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPVLALTLALTMWAPLPMPHSLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLSTTQEKLWLLFPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGTSHNPHMPELCTMNLIIKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMTAGI-P-PQA--MNP-LISITLLMTLILSTMIVMISSHWLFAWIGLEMNMMAIIPIMMKKPSPR-ATEASTKYFLTQATASTLLMLAVILNLMHSGQW--TIMKLFDPTASALMTMALAIKLGLSPFHFWVPEVTQGIPLTTGLILLTWQKIAPISILYQISPSINLHLMITM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTSILLYNSTLTLLNLLIYIIMTFTMFMLLIQNTTTTTLLL---SQTWNTTPVMTTFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPTLMAVTALLNLYFYMRLAYSTALTLFPSTNNMKMKW-QFHPTKQMTLL-------PTAIVLSTMLLPLTPTYYILL---MN-FLLTLLTNTTLALLLMLIAFWLPQLNTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLKTMLLMTLFLISLLAASLAYEWTQKG--LEWDK-MSLVHINILMAFTMSLTGLLMYRSHLMSALLCLEGMVLSLFILMTLTILNSHFTLANMAPIILLVFAACEAAIGLALLVMISNTYGTDHVQNLNLLQCMLKFIIPTIMLMPLTWLSKNSFIWINTTTHSLLISFTSL-LLLNQFNDNSLNYS-SMFFSDPLSTPLLMLTMWLLPLMLMASQSHLLKEPLTRKKLYITMLIVLQTLLIMTFTAMELIMFYIMFEATLIPTLIIITRWGSQAERLNAGLYFLFYTLMGSLPLLVTLTYLQNTLGTLNFLLLQYWTQPLP-TSW-----SNIFMWLACMVAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTGHMAYPFLALSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVIAAILIQTPWSYMGASALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQIFFPLMAAWWLLASLTNLALPPTINLIGELLVIMSTFSWSNLTIILMGTNVVITALYSLYMLIMTQRGKHTHHINNLTPSFTREHALMALHIIPLLLLSLSPKIILGPLY------MDLFTSS-TLLTLLMLITPIMAS---STNLYKN-SNYQHYVKNM-TLSAFIISLIPMTMFIHTNQEMLISNWHWITIHTFKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPNINQFFKYLLIFLITMLILVTANNLFQLLVGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLSNTNSWDLQQIFVLSQN-PSNLPLMGLTLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFSPLMENNKPIQTMMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTVGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALITGCLALTGVPFLTGFYSKDPIIEAATSSYTNAWALLLTLIATS-LTAVYSTRIIFYTLLEQPRFSPLMNINETNPALINPIKRLLVGSIFAGFILSNNMPPMTTPLMTMPLHLKLTALMVTTLGFIIALEINTYSKNLK--YPHLSNFTNFSTLLGYFPTIMHRLPPHLILTMGQKLATSLLDLTWTEIILPKTMTSIQLKASL--LTSNQKGLIKLYFLS---FLITM--TLVMLLF----------NYPE---- +>Dama_dama_fallow_deer +----MNENLFASFITPM-ILGLPLTTLIVMFPSLLFPTSN-RLVNNRLISLQQWMLQLVSKQMMGIHNIKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISTTMALITFTVLVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LALFIIFQLKISKHSFHL-NPETT-LAKAQKQ-STP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMVLLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGIYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDVDKIPFHPYYTIKDILGILFLFLFLMTLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPFLHTSKQRSMMFRPFSQCLFWVLVADLLTLTWIGGQPVEYPFITIGQLASILYFLIILVLMPATSTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFMSSI-P-PQT--MNP-IIFILILSTMMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEAATKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMLMTMALTMKLGMAPFHFWLPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTVLVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPMLSILE---MN-LMLALLTNFTLASLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVALAGLLMYRSHLMSSLLCLEGMMLSLFVLASLTILTSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIVPTMMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSAPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNITGSLNFLVLQYWMQPLS-NTW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMASFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-ALITLLLLIIPIMTT---SSDNYKT-SNYPLYVKTT-ISCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTIKLTLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLNPN-DSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGVPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLVTINENNPFLMNSIKRLMIGSLFAGFIISNSIPPTTIPQLTMPYYLKMVALTVTILGFILALEISNTTQNLK--FNYSTNIFKFSNMLGYFPMIMHRLTPYVNLMMSQKSASSLLDLIWLENILPKTTSLIQTKMSI--MVTNQKGLIKLYFLS---FLITI--TVSIVLF----------NFHE---- +>Axis_axis_chital +----MNENLFASFITPM-ILGLPLATLIVMFPSLLFPTSN-RLVNNRFISLQQWMLQLVSKQMMGIHNAKGQMWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVVTGFRNKAKASFAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISTTMALITFIVLVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LTLFIIFQLKISKHNFYF-NPEPT-LAKTQKQ-NTP-W-ETKWTKIYLP-LL-LPQ-----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSIVELTTTNLEWLNGCPPPYHTFEEPTYINL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLTTNTLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGIYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGVCLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDTLGIILLIMFLMLLVLFAPDMLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALASSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIIIGQLASILYFLIILILMPIISSIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFMSSI-P-PQT--MNP-IIFILILLTMMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFSLFMANSTTTTLSL---SHTWNKMPVMTVLILITLLSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFFTTKQMPLL-------PTMVVLSTMLLPLTPILSILE---MN-LVLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALLLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVALAGLLMYRSHLMSSLLCLEGMMLSLFVMASLTILNLHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENITRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALVYLQNITGSLNFLVLQYWVQPMS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-ALLTLLLLTIPIMAT---SSDDYKI-SNYPLYVKTT-IFYAFITSMIPMMMFIHTGQEMIISNWHWLTIQTIKLTLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMYSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRSDANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLNPN-DSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLISINENNPFLMNSIKRLMIGSLFAGFIISNNIPPMTIPQLTMPYYLKMTALTVTILGFILALEISNMTQNLK--FNYPTNIFKFSNMLGYFPTIMHRLTPYMNLMMSQKSASSLLDLIWLESILPKTTSLIQMKMSI--MVTNQKGLIKLYFLS---FLITI--IISMTLF----------NFHE---- +>Tarsius_syrichta_Philippine_tarsier +----MNENLFASFITPT-MMGLPVVVLVIMFPIILFPTSA-RLINNRFISLQRWLVQLVLKQMMSTHNNKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRHKTKASLAHFLPQGTPFPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLSS-ISTIAALTTFIILMLLTILELAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTILAMT-LTLFILFQLNISKLTYPF-NLSLA-DIKLQTL-NSP-W-ELKWTKIYLP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYVLILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFTLHSTWAKIHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFMIWEAFASKREVLAVELPATNLEWLHGCPPPYHTFEEPTYVKA----------MTHPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPLLTVKTMGHQWYWSYEYTDYEDLNFDSYMVPTTDLKPGELRLLEVDNRVVLPMEVPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLTSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEDWSVSMT----------MTHQMHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSLMLLILGLATNTLTMYQWWRDIIREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIYPLNPMEVPLLNTSVLLASGVSITWAHHSLLEGNRKQMLQALSITIMLGIYFTLLQMSEYFETSFTISDSVYGSTFFMATGFHGLHVIIGSTFLTICFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MANLRKTHPLMKIINQSFIDLPAPSNISAWWNFGSLLGVCLGLQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFLCLFMHVGRGLYYGSFTFLETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFVVTALVIVHLLFLHETGSNNPSGMSSDTDKIPFHPYFTIKDILGLMILMLLLMILVLFMPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIIPMLHMSKQRSMIFRPLSQCLFWILAADLLTLTWIGGQPVEYPYITIGQAASVLYFLTILILMPMTNLIESKLL---KW--------MF--------LINLLILIIPILLAMAFLTLAERKVLGYMQLRKGPNIIGPYGLLQPFADAMKLFIKEPLHPLTSTSLLYIIAPTLALSLALIMWIPMPMPHPLLNMNLSILFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLAILLMNGSFTLMTLITTQEYSWLFFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTIIFLGALHNILSPEMFTINFMAKTLTLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWYISMPVLMCSI-P-PHL--MKP-LTLSSIFLTLFSGTMITMFSSHWLLIWIGLEMSMLAITPILIEKANPR-STEAATKYFLIQATASMLLMMAVITDSSYSGQW--TAMNKFNQASSMMILIALMMKLGLSPFHFWVPEVAQGVSLTSGMLLLTWQKLAPISILYQINMTLDLTLMTLI-ALTSIALGGWGGLNQTQLRKILAYSSIAHMGWMVAILKYNSAMMILNLLIYIILTITLFSMLILFSSTTILAM---SNSWNKIPLASSMMPLILLSLGGLPPLTGFLPKWAIIQELMKNNNTLIPMLMAITALLNLFFYMRLTYSTTLTMFPVNNTTKMKW-QFENTKLMFIV-------PTLTTLSTLLLPMSPMLLQLE---MN-LILSLIMDMTLALLLVSIAFWLPQLNMYTEKSSPYECGFDPTESARLPFSMKFFLIAITFLLFDLEIALLLPLPWATHTTNLSLMLTMALALITILALGLAYEWIQKG--LEWTE-MPYIYINLVLAFLTSLLGMLMYRSHLMSSLLCLEGMMLSMFIMTSLTILNLHFTLANMIPIMLLVFAACEAAVGLALLVMVSNTYGLDYVQNLSLLQCMLKIILPTLMMIPLTWYSKKHTIWINTTVHSLVISLTTL-SLLNYFLDISTNFS-ATFSTDSLSTPLLILTTWLLPLMIMASQNHLSKEPLTRKKLYISMLITLQAFLIMTFTATELIFFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLIALVYTQNLLGSLNMMINTLIMPSLS-NSW-----SNSILWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNP-PMEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFIGATTLMIAHGLTSSLLFCLANTNYERVHSRTMALARGLQTLLPLAATWWLLASLTNLALPPTINLIGELSVMMAAFSWSHLTIILVGLNTLITALYSLYMLIMTQRGKYTYHINNIMPPFTRENTLMIMHLFPLILLSTNPKLIMGTMY------MNLFSSS-ILLSLTLLITPFIIT---TTKKYET-HAYPYYVKNS-IACAFMTSLVPMLMFLYTNQEMIISNWHWMTIHTMKLCLSFKMDYFSTIFMPVALFVTWSIMEFSMWYMHSDPHINRFFKYLLVFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLTYSNSWEFQQIFITTHN-SDTLPLLGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLLETNKLIQTMTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLLMTLPFTSSSLLIGSLALTGTPFLTGFYSKDLIIEAANTSYTNAWALSITLLATS-LTAVYSTRIIFFALLGKPRFPTSTNINENNPLLVNPIMRLALGSIFAGFLISNSIPPMTIPQMTMPLYLKLSAFAVTITGFTLAMELNNLTYFLK--LKRITQPLLFSNLLGFFPITTHRLCPLMSMYTSQNTASSLLDLLWLEKMMPKTTAMIHMYTST--TTSSQSGMIKLYSLS---FLITM--LLGALLTII---------------- +>Elaphodus_cephalophus_tufted_deer +----MNENLFASFIIPM-VLGLPLVTLIIMFPSLLFPTSN-RLVNNRFISLQQWMLQLVSKQMMGIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMN-ISTTMALITFIILVLLTVLEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFVMIMSMF-LVLFIIFQLKISKHNFHF-NPEPM-LTKTQKQ-NIP-W-ETKWTKIYLP-LL-LSQ-----MFINRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNS-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSLILLTIGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGSRNHTLQALFITIALGIYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDSDKIPFHPYYTIKDILGALLLILFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIIIGQLASVLYFLIILVLMPITSTIENNLL---KWK-------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLTVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTVLFLGAFHNPFLPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-IIFILILSTMMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPFINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFSLFMANSTTTTLSL---SHTWNKMPVMTVLALITLLSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPTTKRMILL-------PTMTVLSTMLLPLTPILSVLE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFTVSLTGLLMYRSHLMSSLLCLEGMMLALFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGKMIWINSTTYSLLITLTSL-LLMNQFSDNSLNFS-LMFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESLTRKKLYITMLILLQLFLIMTFTATELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNITGSLNFLVLQYWVEPLP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGTLY------MNLFASF-TLITLLLLTIPIMTT---SSKNYKT-SNYPLYVKTT-ISCAFLTSMIPTMMFIHSGQEMIISNWHWLTIQTMKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFIMAMAWFLTNLNAWDFQQIFMLSPN-NSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLLTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLMNSIKRLMIGSLFAGFIISNNIPPMTIPQMTMPHYLKMMALAVTVLGFILALEISNMTQNLK--FNYPTNIFKFSNMLGYFPTITHRLTPYVNLTMSQKSASSLLDLIWLENILPKTTSLIQMKMSI--MVTNQKGLIKLYFLS---FLVTI--VISTVLF----------NFHE---- +>Viverricula_indica_small_Indian_civet +----MNENLFASFITPT-MMGLPIVILIVMFPSILFPSPN-RLINNRLISLQQWLIQLTAKQMLSIHNQKGQTWALMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAATVVIGFRHKTKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGAALALMN-ISTSVALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITIMSMI-MTLFIVFQLKISKHLYPG-NPEPK-STVTLKQ-LNP-W-EKKWTKIYSP-PS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMIWEAFASKREVAMVELTTTNLEWLHGCPPPYHTFEEPAYVSL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMGTRPGLYYGQCSEICGSNHSFMPIVLELVPLTYFEKWSVSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTLLLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLVKIVNESFIDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGVYYGSYTFSETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGMVSDSDKIPFHPYYTIKDILGLLFLILMLMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIIPLLHTSKQRSMMFRPLSQCLFWFLVADLFTLTWIGGQPVEHPFITIGQLASIFYFSILLILMPIFGTIENRLL---KW--------MF--------MINILSLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSMSMFIMAPILALSLALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLTTLIITQEHMWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHNPHLPELYTANFTIKTLLLTIAFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIIMASI-P-PLT--MKP-PILIIIMSTIMSGTMIVMTSSHWMLTWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMMGIIINLLHSGQW--TVSNNLDPTTSTLMTIALAMKLGLAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSILYQISPTINPNLLMPM-TILSVLIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILLYNPTMMILNLMIYITMTLTTFMLFMFNSTTTTLSL---SQTWNKTPLITSLILTLMLSLGGLPPLSGFTPKWMIIQELTKNEMIILPTFLAITALLNLYFYMRLTYATALTMFPSTNNMKMKW-QFENTKKMILL-------PPLIITSTMLLPLTPMISILD---MN-MMLTLLTNTTLSTLLVLIAFWLPQLNIYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTENPLTMLTMALLLISLLAASLAYEWTQKG--LEWTE-MSMVYINVFLAFIMSLAGLLIYRSHLMSSLLCLEGMMLSLFVMMSVAILSNHFTLANMAPIVLLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTMMLMPLTWLSKPNMIWINSTTYSLLISFISL-TYLNQPNDNSLNFS-LLFFSDPLSAPLLVLTTWLLPLMLMASQSHLSKESLTRKKLYITMLILLQLFLIMTFTAMELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNMSGTLNFLIMQYWTEPIS-PTW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITLLLNP-LTGQMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTLLPLMAAWWLLASLANLALPPTINLIGELFVVMASFSWSNITIILMGTNIIITALYSLYMLITTQRGKYTYHIMNIKPSFTRENVLMTLHLLPLFLLSLNPKIILGPIY------MNLFTSS-ILTTLFILLLPIITS---NTQMYKN-NLYPYYVKTT-ISYAFIISMIPTMMFIYSGQETIISNWHWLTIQTLKLSLSFKLDYFSIIFISVALFVTWSIMEFSMWYMHADPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAILYNRIGDVGFIMTMAWFLINSNTWDFQQIFITQHN-NLTIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEQNKTVQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKSLPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-LTAAYSTRIMFFALLGQPRFNPLILLNENNPLLINSIKRLLIGSIFAGYLISYNIPPTTIPQMTMPLYLKLTALTVTIMGFILALELNLATKNLK--FNYPKYSFKFSNLLGYFPTIMHRFPPMVNLTMSQKSASMLLDAIWLENVLPKTISYFQMKTST--AISNQKGLIKLYFLS---FLITL--TLSLTLL----------NFHE---- +>Perodicticus_potto_potto +----MNQNLFTSFITPS-MAGLPIITLIIMFPSILFPAPT-RLINNRMTSMQQWLTQLALKQLMITHNTKGRTWSLMLITLMMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAATVLTGFRHKTKASLAHFLPQGTPPLLIPMLVLIETISLFIQPLALAVRLTANITAGHLLMHLIGGATLALSS-ISPTTALITFIILILLSALELAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWTMTILSTA-LTLFILFQLKLLKFTFPT-DPSQK-LMKLPTH-TNP-W-NKKWTKTYLP-LS-SPPQ----MFINRWLYSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIVNMKPPAMTQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVSYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDQTWAKIHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSIGSFISMTAVVLMIFMVWEAFASKREVGTVELTPTNLEWLHGCPPPYHTFEEPTYIKA----------MAHPVQLGFQDAASPIMEELLYFHDHTLMIVFTISSLVLYIISLMLSTELTHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEINTPSLTLKTMGHQWYWSYEYTDYDNLCFDSYMIPTPDLEPGDLRLLEVDNRVILPTEMSIRMLISSEDVLHSWTVPALGIKTDAIPGRLNQATLMTSRAGIYYGQCSEICGSNHSFMPIVLELVPLKYFEEWLLKTL----------MTHQAHSYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSTTLLTLGLMTNTLTMLQWWRDVVRESTFQGHHTPTVQKGLRYGMVLFIISEVLFFAGFFWSFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTAVLLASGVSITWAHHSLMENNRKHMTQALSITIALGLYFTLLQASEYLETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCLLRQLNFHFTPNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTIIRKHHPLAKIINHSFIDLPTPSNISSWWNFGSLLGLCLVIQITTGLFLAMHYTPDTITAFSSVTHVCRDVNYGWLIRYMHANGASMFFICLFIHIGRGLYYGSFNFLETWNIGIALLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMTHLLFLHETGSNNPSGIPSESDKIPFHPYYTTKDLLGAVLLLLSLFTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVMALVLSILILALIPVIHSTKQRSMMFRPLSQCLYWILVADLITLTWIGGQPVENPFIIIGQTASILYFTTILILMPLTNMLENKLL---KW--------MF--------MVNLLLLIIPIILAMAFLTLLERKTLGYMQLRKGPNIVGPNGLLQPFADAMKLFIKEPLRPLTSSSLLYVIAPTLALSIALIMWTPLPIPFPLININLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILMMNGTYILPTFILTQEHTWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTIFLSSLNNLNSPEFFSTSFTLKTLLLTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYASLPIFLASI-P-PQK--MKP-PILLLIYLTLFTGSILTMISSHWLLTWIGLEMNMLAIIPILIKKAPPR-STEAATKYFLTQATASMVLIMAIIINSMHSGQW--AMTKPFDPLPSLMMTLSLTMKLGMSPFHFWVPEVTQGVTLMSGLVLLTWQKLAPIAILLQTHQTINPNMMLAI-ALLSTLVGGWGGLNQTQLRKILAFSSIAHMGWMMAIITFNPSATILNLLVYLALTIPTFSLLMSNSSTTTLTL---THLWNKMPVLTLIIATLLLSLGGLPPLSGFLPKWIIIQELSKNYNIILPILMATLALLNLFFYMRLIYSSSLTMFPTTNNTKMKW-QFEITLPMTAT-------TPMIVLASMLLPLTPMISSLN---MN-TMIMLITNTTLSSILVLVALWLPQLNIYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWALQTHMLNLMLTVTLMLISILALGLTYEWLQKG--LEWQE-MPSISTNIILAFITALLGVLMYRSHLMSSLLCLEGMMLSMFILTSLMALNLQFTLSSITPIILLVFAACEAAVGLALLVMVSNSYGMDHVQNLNLLQCMLKIIIPTIMLFPLTWHSNHRTLWINTTTHSLTISLISF-HLLHQPNNN-LHFS-TTFSSDTLSTPLVMLTTWLLPLMIMASQHHLHKESLTRKKTYISMLISLQLTLIMMFSASELILFYILFETTLIPTLIIITRWGNQTERLNAGLYFLFYTLLGSLPLLVVLIHMQNSLGSLNFNILSLYTQNTTTCSW-----SDDLMWMACMMAFLVKMPLYGTHLWLPKAHVEAPIAGSMVLAAVLLKMGGYGMMRMTSLLNP-LTYDMAYPFLTLSLWGMIMTS--SICLRQTDLKSLVAYSSVSHMALVITAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMILARGLQTILPLMAIWWLLASLTNLALPPSINLIGELLILISTFSWSNLSILLTGLNTLITALYSLHMFISTQRGNLAHHISNIKPSFTRENTLMSMHIFPLLSLSLNPKIILGPTF---MKVINM-FATLTTTSLIILTLPMMLN---LTTTNNN--HFPNTVKSS-ISCAFVISLPPALLFTHMGQESVVTNWHWLTIQTLKLSTSLKLDYFSVLFIPVALFVTWSIMEFSLWYMHSDPKTSQFFKYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWHARNDANTAALQAILFNRIGDIGFILAMTWFLLYSNSWEIQQMMLLKPN-SETLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNKTLQSTTLCLGAITTLFAAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLFKTLPFTASSLMIGSLALTGIPFLTGFYSKDLIIETANTSNTNAWALAITLIATS-LTAIYSTRIIFFALMGQPRFPPSICINENNPLLINSIKRLAIGSVLAGYLISNNIPPMTTPQMTMPYHLKLMAVGMTILGFSLAMELNLLTTNLK--FKPYHSPQIFSTSLGFFPTTLHRTLPDLNLKSSQNMSSLLLDLNWLEELMPKTLTYLQLLGSK--TVSNQKGLIKLYFLS---FLTSA--LLTFILLI----------------- +>Nycticebus_coucang_slow_loris +----MDQNLFASFITPT-MAGLPIVIFIVMFPYIMISAPT-RLISNRMTSMQQWLIQLILKQLMVTHNTKGRTWSLMLISLIIFIGSTNLLGLLPHTFTPTTQLSMNLAMAIPLWAATVITGFRHKTKASLAHFLPQGTPPLLIPMLVLIETISLLIQPMALAVRLTANITAGHLLMHLIGGATLAISS-ISSVAASITFIILILLSILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWTITIMSMI-LTLFILFQLKLSKFMYPT-NPTKK-LTKPHKL-ESP-W-EMKWTKTYLP-HS-LPLQ----MFINRWLYSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTAINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVSFYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLLNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDQTWAKIHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNSISSIGSFISLTAVVLMIFMVWEAFASKREVMMVELTHTNLEWLHGCPPPYHTFEEPTYVKA----------MAHPMQLGFQDAASPIMEELLYFHDHTLMIVFMISSLVLYIISLMLSTELTHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEINTPSMTLKTMGHQWYWSYEYTDYDNLCFDSYMVTTPDLEPGDLRLLEVDNRVILPTEMSIRMLISSEDVLHSWTVPALGIKTDAIPGRLNQATLMTSRPGIYYGQCSEICGSNHSFMPIVLELVPLKYFEEWLLKSL----------MTHQTHTYHMVNPSPWPLTGAISALLMTSGLIMWFHFNSMTLLTLGLLTNTLTMLQWWRDIVREGTFQGHHTPTVQKGLRYGMVLFIISEIFFFAGFFWSFYHSSLAPTPELGGCWPPTGINPLNPLDVPLLNTAVLLASGVSITWAHHSLMEGNRKHMMQALFITIALGLYFTLLQASEYFETPFTISDGVYGSTFFMATGFHGLHVIIGSSFLTVCLIRQLNYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKNHPLMKIINHSFIDLPAPSNISSWWNFGSLLGLCLTIQIVTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYIHANGASMFFFCLFIHIGRGLYYGSFTLLDTWNIGIMLLIAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWVWGGFSVDKATLTRFFAFHFILPFIVAALVVIHLIFLHETGSNNPSGISSDSDKIPFHPYYSLKDLLGVVFLLATLSILVLFSPDLLGDPDNYTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAMSILILALIPHLHTAKQRSMMFRPLSQCLFWVLVANLLTLTWIGGQPVENPFIIIGQTASILYFLTILILMPLTSLFENKLL---KW--------MF--------MVNLLMLVIPVMLAMAFLTLLERKTLGYMQFRKGPNVVGPNGLLQPFADAMKLFIKEPLQPLTSSTSLYIIAPTLALSIALIMWTPLPIPYPLVNINLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLCILLMSGSFTLSTLIKTQEHTWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTATIFMSAIHSMYFPEFFSINFTLKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHTALPIFLANI-P-PQT--MKP-PILLLIYFTLFIGTVLTMISSHWLLIWVGLEMNMLAIIPILTKKTSPR-PMEAATKYFLTQATASMILMMAIIINTMNSGQW--TAMKTVSSLSSPMMLIALTVKLGMTPFHFWVPEVTQGISLTSGLILLTWQKLAPMSILLQMNNSINSNITLLI-ALLSIAIGGWGGLNQTQLRKILAFSSISHMGWMLAIITFNPSATILNLLIYLLLTLSMFIMILSIPSTSTLTM---SHSWNKTPVLTSMLLTTLLSLGGLPPLSGFLPKWIIIQELCNSHNIITPTLMAIMSLLNLFFYMRLVYSSSLTMFPTMNNMKMKW-QLNTPTPPAMM-------TPLITVSSMLLPLSPIISTLN---MN-TMIMLITNTSLASVLVLLAFWLPQLNIYTEKYSPYECGFDPTGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTHMLNLMLTMTFLLILILALGLAYEWIQKG--LEWQE-MPLISTNILLAFITALLGVLIYRSHLMSSLLCLEGMMLSMFILVSLTTMNLHFTLANIAPLILLVFAACEAAVGLALLVMVSNTYGMDYIQNLNLLQCMLKIIIPTIMLVPVTWLSHHRTLWINVTVHSLMISSISL-HLLHQPINN-LNFT-LMYFSDTLSTPLLILTTWLLPLMILASQHHLRKEPLVRKKLYILMLITLQTLLVMTFTASELILFYILFEATLIPTLVIITRWGNQTERLNAGLYFLFYTLLGSLPLLIILLYTQNLAGSLNLSILPLYHQNMLTPSW-----SSDLAWIACMMAFMVKMPLYGTHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITTILTP-LTNMMAYPFITLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILTQTPWSFMGATALMIAHGLTSSMMFCLANSNYERIHSRTMILARGLQTLLPLMALWWLTASLTNLALPPSINLVGELLIIITAFTWSKLTILLTGLNVLITALYSLYMFTMTQHGKSTFHTHNIKPSFTRENTLMSLHVLPLLSLSLNPKIILGLTLCK----MNTLLPTMATTSLIILTLPIILS----TTKMNN-TPFPNLVKLS-ISHAFSVSLIPALLFVFSGQDSVITNWHWMTIQTLKLSTSLKLDYFSILFMPVALFVTWSIMEFSMWYMHSDPQMNKFFKYLLLFLITMTILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILFNRIGDIGFILSMTWFLLHSNSWEIQQMFITYPN-TSILPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLLDNSKTMQTMTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHHAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLLNTLPFTASSLMIGSLALTGMPFLTGFYSKDLIIETANTSNTNAWALLITLTATS-LTAVYSTRIIFFALLGQPRFPPTIVINENNPLLTNPIKRLAIGSISAGYLISNNIPPMTTPQMTMPLYLKLTAMMITILGFSLAMEMNFITTNLK--FKHARAPHTFSNSLGYFPITIHRLLPNLDLKSSQNMSSTLLDLIWLEKSMPKNLAQVQLYASK--TVSNQKGLIKLYFSS---FLIST--LFALTLMI----------------- +>Tarsius_bancanus_Horsfields_tarsier +----MNENLFASFITPT-MMGLPVVILIIMFPTMLFPTPT-RLINNRFISLQQWLIQLVLKQMMTMHNNKGRTWSLMLVSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPILLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLILLS-INTIAASTTFIILTLLTILELAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFITILSMT-LTLFILFQLNISKLTYPL-NLNLK-NINTETF-KLP-W-ELKWTKTYSP-LS-LPPQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFILHPTWAKTHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFMIWEAFASKREVLAIELPTTNLEWLHGCPPPYHTFEEPTYVKA----------MAHSFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYLMDEINTPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTADLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFENWSTSMI----------MTHQMHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSSILLTLGLITNTLTMYQWWRDIIREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIYPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKQMMQALLITIMLGIYFTLLQASEYFETSFTISDSVYGSTFFMATGFHGLHVIIGSTFLSVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKTHPLMKIINHSFIDLPAPSNISAWWNFGSLLGVCLGLQIVTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFMCLFMHVGRGLYYGSYTFLETWNIGILLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGINLVEWIWGGFSVDKATLTRFFAFHFILPFMVTALVMVHLLFLHETGSNNPSGISSDTDKIPFHPYFTIKDILGLAILMLFLMTLVLFMPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALMLSILILAIIPMLHTSKQRSMSFRPLSQCLFWMLVANLLTLTWIGGQPVEHPFIIIGQTASILYFLNILILMPLTNIIENKMI---KW--------MF--------MINLLILIIPVLLAMAFLTLAERKVLGYMQLRKGPNTIGPYGLLQPFADAMKLFIKEPLHPLTSTSLLYIIAPTLALSLALIMWIPVPMPYPLLNMNLSVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLAILLMSGSFTLTKLIMTQEYSWLIAPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTIIFLGALHNIFMPEMFTINFMTKTIILTSLFLWTRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISMPILTCGI-P-PHL--MKP-ITLFSIILTLFSGTMITMFSSHWLLTWIGLEMSMLAITPILIEKANPR-STEAATKYFLTQATASMLLMMAVIMNMTFSGQW--TVMNKLNQMSSLMILIALVMKLGLSPFHFWVPEVTQGVSLMSGMLLLTWQKLAPISILYQINMTLNLTLMIMI-ALASIALGGWGGLNQTQLRKILAYSSIAHMGWMIAILKYNPTIMILNLLIYIILTITLFSTLILFSSTTILMM---SNSWNKTPLASSMMPLILLSLGGLPPLTGFLPKWAIIQELMKNDNILIPMLMAITALLNLYFYMRLTYSTTLTMFPVNNNTKMKW-QFENTKLTLIV-------PTLMILSTLLLPLSPTFLLPE---MN-LIMSLITNMALALLLVSIAFWLPQLNTYTEKSSPYECGFDPTESARLPFSMKFFLIAITFLLFDLEIALLLPLPWATQMTNLSLMMFMALTLISILALGLAYEWTQKG--LEWTE-MPYIYTNLFLAFLTSLLGMLIYRSHLMSSLLCLEGMMLSMFIMTSLTILNLHFTLSNMIPIILLVFAACEAAVGLALLVMVSNTYGLDYVQNLNLLQCMLKIILPTFMLIPLTWHSKKNNIWINTTAHSLMISLITL-SLLNHWYNTNMNFS-LTFFTDSLSTPLLILTTWLLPLMVMASQNHLSKESLGRKKLYISMLVMLQIFLIMTFTATELVLFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLIALIYTQNFMGTLNMASNSLIALNIP-NSW-----SNNILWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRMTIILNP-LTEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFIGATVLMIAHGLTSSLLFCLANTNYERIHSRTMTLARGLQTLLPLMATWWLLASLTNLALPPTINLVGELFIMMASFSWSHLTIILMGLNMLITALYSLYMLTMTQRGKYTYHINNIKPPFTRENTLMIMHLLPLILLSINPKLIMGNMC------MNLFTPS-ILLSLMLLIIPFMAT---TTKKYKN-HLYPHYVKNS-IASAFMTSLIPMTMFLHTNQEAIVSNWHWMTIQTMKLSLSFKMDYFSMIFMPVALFVTWSIMEFSMWYMYSDYNINRFFKYLLLFLITMLILVSANNLFQLFIGWEGVGIMSFLLIGWWHGRTNANTAALQAILYNRIGDIGFILTMAWFLTYSNSWEFQQMFITTTN-SNTLPLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLLEINETIQTTTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLLTTLPFTSSSLLIGSLALTGMPFLTGFYSKDLIIEAANISYTNAWALSITLLATS-LTAVYSTRIIFFALLGQPRFSTTMNINENNPLLIKPIKRLALGSIFAGFLISNSIPPMTTPQMTMPLYLKFSALLITILGFTLAMELNNLTYFLK--LKHYTQPLLFSNLLGFFPTTVHRLSPLTKLYISQNTASSLLDLLWLEKTMPKNMTMIHMRTST--TTSNQSGMIKLYFMS---FLITM--TLGTLLIL----------------- +>Redunca_fulvorufula_mountain_reedbuck +----MNENLFASFITPM-VLGLPLVTLIVLFPSLLFPTSN-RLVSNRLVSLQQWALQLVTKQMMNIHNPKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKSSLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTMALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFHY-SPKLT-STETPKQ-NTP-W-EKEWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYINL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMETTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFHSATLLMLGLTTNILTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITISLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLMLQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYMFLETWNIGVLLLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTXLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAMVHLLFLHETGSNNPTGVSSDMDKIPFHPYYTIKDILGALLLILALTLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLXAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILILMPTASTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKILGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALGLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTVNFIIKTLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIVILMTVMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINPNLILTL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTTTMFTLFMANSTTTTLSL---SHTWNKAPVMTALVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSSTKRMTLL-------PTMTVLSTMLLPLTPILSILE---MN-LMLALLTNFSLATLLVTIAFWLPQLNTYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLSTMLTMALLLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVSLVGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWLSKGNMIWINSTMYSLLISLTSL-LLMNQFIDNSLNFS-LIFFSDALSAPLLILTMWLLPLMLMASQHHLSKESLTRKKLFITMLILLQLFLIMTFTATELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIHIQNMTGSLNFLILQYWVQPMP-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLIMTQRGKYTYHINNILPSFTRENALMALHMLPLLLLSLNPKIILGPLY------MNMFSSF-TLTTLLLLTVPIMMT---SFNTYKS-PKYPPYVKTT-ISCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMHADPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLVNSNTWDLQQIFALELN-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSTMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPALVIINENNPLLINSIKRLLIGSLFAGFIISNHIPPTTIPQMTMPPYLKMTALLVTALGFILALEISNMTHNLK--FNYPSNTFKFSNLLGYYPTIMHRLTPYMSLLMSQKSASSLLDLIWLENVLPKSISLAQMKMAT--TITNQKGLIKLYFLS---FLVTI--LVSTVLL----------SFHE---- +>Redunca_arundinum_southern_reedbuck +----MNENLFASFITPM-VLGLPLVTLIVLFPSLLFPTSN-RLVSNRLISLQQWALQLVTKQMMNIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTMALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFHY-SPKPT-STKASKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNETWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYINL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMETTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFHSTTLLMLGLTTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLMLQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYMFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPTGISSDVDKIPFHPYYTIKDVLGALLLILVLLLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILILMPLLHLSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILILMPTASTIENNLL---KW--------MF--------MVNILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTVNFTIKTLLLTISFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIYIIILMTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMEKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINPNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTTTMFTLFMANSTTTTLSL---SHTWNKTPIMTALVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSSTKRMTLL-------PTMTVLSTMLLPLTPILSILE---MN-LMLALLTNFTLASLLVTIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAASLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLVGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWLSKSNMIWVNSTMYSLLISLTSL-LLMNQFIDNSLNFS-LVFFSDALSTPLLILTMWLLPLMLMASQHHLSKESLIRKKLFITMLVLLQLFLIMTFTATELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIHLQNMVGSLNFLILQYWVQPMP-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLIMTQRGKYTYHINNILPSFTRENALMALHMLPLLLLSLNPKIILGPLY------MNMFSSF-TLTTLLLLTVPIMMT---SSNTYKS-PKYPSYVKTT-ISYAFIISMIPTMMFIHTGQEMMISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMHADPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLMNLNTWDLQQIFMLEPN-HSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFVQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPALININENNPLLINSIKRLLIGSLFAGFVISNNIPPTTIPQMTMPYYLKMMALLVTILGFILALEISNMTYNLK--FNYSSNTFKFSNLLGYYPTIMHRLTPYMSLLMSQKSASSLLDLIWLENILPKSISLAQMKMAT--TITNQKGLIKLYFLS---FLITI--LVSTILL----------NFHE---- +>Pelea_capreolus_common_rhebok +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLVNNRLISLQQWALQLVSKQMMSIHNPKGQTWALMLMSLILFIGSTNLMGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLALMS-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFVIFQLKISKHNFFH-NPEST-STKMPKQ-DSP-W-EAKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYINL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPSVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIALGTYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLVLQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYIFLKTWNIGVILLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALTMVHLLFLHETGSNNPTGIPSDMDKIPFHPYYTIKDILGALLLILILTLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRTMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYVVIGQLASIMYFLLILVLMPTASTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKTLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLIDMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFIIKTLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILMTVMLGTILVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPMASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTM-SLLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKTPVMTVLTLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPSTKQMTLL-------PTMTVLSTMLLPLTPILSILD---MN-LMLALLTNFTLASLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLSTMLTMALLLIFLLALSLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIIVLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKSSMIWINPTMYSLLISLTSL-LLMNQFIDNSLNFS-LIFFSDALSTPLLILTMWLLPLMLMASQHHLSKESLTRKKLFITMLILLQLFLIMTFTATELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTMGSLNFLILQYWVQPVP-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-MTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSTFSWSNITIILMGLNMVITALYSLYMLIMTQRGKYTHHINSIPPSFTRENALMALHMLPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLLLLTMPIMMA---SSNIYKS-PKFPLYVKTT-ISYAFITSMIPTTMFIHTGQEMIISNWHWLTVQTLKLSLSFKMDYFSMMFVPIALFVTWSIMEFSMWYMHADPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLVNLNTWNFQQIFMLELN-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSTMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLDNEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPALVMINENNPLLINSIKRLLIGSLFAGFIISNNIPPMTIPQMTMPFYLKMMALMVTVLGFILALEISNMTYNLK--FNYPSNTFKFSNLLGYYPTVMHRLAPYMNLSMSQKSASSLLDLIWLEVLLPKTTSLIQMKMST--VITNQKGLIKLYFLS---FLITI--LVSIILL----------NFHE---- +>Balaena_mysticetus_bowhead_whale +----MNENLFAPFMAPV-MVGIPITTLIIILPSILFPTPN-RLINNRMISIQQWLTKLTSKQLMNTHSPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNVGMAIPLWAGTVFTGFRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGEATLALMD-ISLFTTLITFTILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLLTILSML-LTLFVLLQLKISKHSHSP-NPKLV-LTKTRKQ-QTP-W-NTTWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNSTWTKIHFMIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFTSKREVSAVDLTSTNLEWLNGCPPPYHTFEEPAYVNP-KWS------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEVNNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSTSML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLLTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIALGLYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQMKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINDAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTTTAFSSITHICRDVNYGWIIRYLHANGASMFFICLYAHMGRGLYYGSHAFQETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAIVHLLFLHETGSNNPTGIPSDMDKIPFHPYYTIKDILGALLLILALLMLTLFAPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAFIPMLHTSKQRSMMFRPFSQFLFWMLVADLLTLTWIGGQPVEHPYVIVGQFASILYFLLILVLMPVASLIENKLM---KW--------MF--------MINILTLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPVLALALALTMWSPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLATTQEQLWLIFPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTAILFLGTFHDPYTPELYTTNLITKTLLLTMSFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHISLPIMTASI-P-PQT--MNP-SILIILLTTLILGTMMVITSSHWLLAWIGFEMNMMAFIPIMMKNPSPR-ATEASTKYLLTQATASALLMMAIIINLMYSGQW--TITKLFNPTASTLMTVALAIKLGLAPFHFWVPEVTQGIPLVTGLILLTWQKLAPLSILYQISPSINMHLMLTM-SLLSILVGGWGGLNQTQLRKIMAYSSIAHMGWMTTILLYSPTLTLLNLLIYITMTFTMFMLFIQNSTTTTLSL---SQTWNKMPIITTLTMLTLLSMGGLPPLSGFMPKWMIIQELTKNEILIMPTFMAITALLNLYFYMRLTYSTALTLFPSMNNMKMKW-QFEPTKQTILL-------PTAIVMSTMLLPLTPMLSTLL---MN-LLLTLLTNTTLALLLVFIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLNTMLTMALFLISLLAASLAYEWTQEG--LEWAE-MTLTHMNIIMAFSMSLVGLLMYRSHLMSALLCLEGMMLSLFVLAALTILNSHFTLANMMPIILLVFAACEAAIGLALLVTISNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKNNLIWINSTTHSLLISFTSL-LLLNQLNDNSLNYS-LIFFSDPLSTPLLMLTMWLLPLMLMASQSHLLKEPPVRKKLYITMLIMLQALLIMTFTATELILFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALTYLQNTTGSLNFLLLQHWAQPLS-TSW-----SNIFLWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSMLNP-LTEHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFLPLMATWWLLASLTNLALPPSINLIGELFVVVSAFSWSNPTILLMGTNIVITALYSLYMLIMTQRGKHTHHINNITPSFTREHTLMALHIIPLLLLSLNPKIILGPLY------MNLFTSF-ALLTLLILITPIMMT---TTNIHKN-NKYQSYVKNV-VFCAFITSLIPAMMYLHTNQEALISNWHWVTIQTLKLTLSFKMDYFSLMFMPVSLFITWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLLASMAWFLSHMNTWDLQKIFLLNQN-SLNFPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLMENSKLIQTTTLCLGAITTLFTAIWPLTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPFTTTALIIGCLALTGMPFLTGFYSKDPIIEAATSSYTNAWALLLTLTATS-LTAIYSTRIIFFTLLGQPRFPPSTTINENNPMLINPIKRLLIGSIFAGFILSNSIPPMNTPLMTMPLHLKLTALAMTALGFILAFEINTHTQNLK--HTYPSDFSKFSTLLGYFPTIMHRLPPHLDLLMSQKLATSLLDLTWLETILPKTTALIQLKAST--LTSNQQGLIKLYFLS---FLITI--TLSMILF----------NYPE---- +>Caperea_marginata_pygmy_right_whale +----MNENLFAPFMIPM-VMGIPITILIIILPSILFPTPN-RLINNRTISIQQWLTKLTSKQLMNVHSPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNVGMAIPLWAGTVATGLRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGETTLTLMN-TSLFTALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLLTILSMF-LALFMLFQLKISKYSYLP-NPKLT-FTNTQKQ-QAP-W-NTTWTKIYLP-PL---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAVGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNSTWTKIHFMVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFTSKREVLAVDLTSTNLEWLNGCPPPYHTFEEPAFVNP-KWS------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEVNNPTLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLETFEKWSMSML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMVLLTLGLLTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIALGLYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFICIYAHMGRGLYYGSHAFRETWNIGVILLFTTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAAVHLLFLHETGSNNPTGIPSNMDKIPFHPYYTIKDILGVLLLILTLLMLTLFTPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILALIPMLHTSKQRSMMFRPFSQFLFWVLVADLLTLTWIGGQPVEHPYVMVGQLASILYFFLILILMPVTSLIENKLM---KW--------MF--------MINILTLILPILLAVAFLTLVERKILGYMQFRKGPNVVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPVLALTLALTMWSPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSMLTVTQEQLWLLFPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYTNIIMMNMLTVILFLGTFYDPYNPELYTMNLTTKTLMLTMLFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISLPIMTASI-P-PQT--MNP-SIFIILLTTLILGTMMVITSSHWLLAWIGFEMNMMAFIPIMMKNPSPR-ATEASTKYLLTQATASTLLMMAIIINLMYSGQW--TIMKLFNPTASTLMTMALAIKLGLAPFHFWVPEVTQGIPLATGLILLTWQKLAPLSILYQISQSINLHLMLTM-SLLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILLYNPTLMLLNLLIYITMTFTMFMLFIQNSTTTTLSL---AQMWNKTPTIMTLTMLTLLSMGGLPPLSGFMPKWMIIQELTKNDMLIMPMFMATTALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSSTKRTTLL-------PTAIVISTMLLPLTPMLSTLL---MN-LLLTLLTNLMLALLLTFIAFWLPQLNMYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLNTMLIMALFLISLLAASLAYEWTQGG--LEWAE-MTLIHMNIIMAFSMSLVGLLMYRSHLMSALLCLESMMLSLFILATLTVLNSHFTLANIMPIILLVFAACEAAIGLALLVMISNTYGTDYVQNLNLLQCMLKFIIPTMMLMPLTWLSKNNLIWINSTTHSLLISFTSL-LLFNQFNDNSLNYS-LTFFSDPLSTPLLILTMWLLPLMLMASQSHLLKESLTRKKLYVTMLIVLQTLLIMTFTATELILFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALTYLQNTTGSLNFLLLQHWTQPLS-PTW-----SNIFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITFMLDP-LTEFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRIMILARGLQISLPLMATWWLLASLTNLALPPTINLIGELLTVMSIFSWSNPTIFLMGTNIVITALYSLYMLIMTQRGKHTHHINNIIPSFTREHALMALHVIPLLLLSLNPKIILGPLY------MNLFTSF-SLLTLLILAAPIMMP---NMNAHES-NKYQHYVKNI-VFCAFIISLIPAMMYLHTNQETLISNWHWLTIQTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLLASMAWFLSNMNTWDLQQIFMLSQI-PLNFPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPLVETNKIIQTVILCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPFTTTALIIGCLALTGMPFLTGFYSKDPIIEAATSSYTNAWALLLTLTATS-LTAIYSTRIIFFALLGQPRFPPSTTINENNPLLINPIKRLLIGSIFAGFILSNSIPPTTTPLMTMPLHLKLTALVVTTLGFIIAFEINLDTQNLK--YMHPSKSSKFSTLLGYFPTIMHRLPPHLDLLMSQKLATSLLDLTWLETILPKTTALIQLKAST--LTSNQQGLIKLYFLS---FLITI--TLSMTMF----------NHLE---- +>Mustela_kathiah_yellow-bellied_weasel +----MNENLFSSFTTPT-MMGLPIIIIITMFPGIMFPSPN-RLINNRLISIQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTITAMITFTILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-ITLFFMFQLKVSKYNFPE-NPEAK-LVATSKS-VAP-W-EKKWTKIYSP-HS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGSINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLLMIFMIWEAFASKREVLTVELTSTNIEWLHGCPPPYHTFEEPTYVLS-K--------MAYPFQMGLQDAASPIMEELLHFHDHTLMIVFLISSLVLYIISAMLTTKLTHTSTMDAQAVETIWTILPAIILIMIALPSLRILYMMDEINSPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTIMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLTASGLVMWFHYNSLVLLTLGTTTNMLTMYQWWRDIVREGTFQGHHTPTVQKGLRYGMILFITSELFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGLYFTLLQASEYYEAPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLTKIINNSFIDLPAPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYMFPETWNIGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALLLILTLMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFMILLILMPITSIIENNLL---KW--------ML--------MINIISLIVPILLAVAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFVMAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHTPYLPELYSINFTMKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASI-P-PQT--MKP-PILIIIMFTVISGTIMVLMSSHWLMIWIGFEMNMLAIIPILMKKYNPR-AVEAATKYFLTQATASMLLMLGIIMNLLLTGQW--AVLSTLNPIVSNTMTVALAMKLGLSPFHFWVPEVTQGIPLLSGMVLLTWQKIAPLSILYQMAPSMNPHLLMTM-ALMSVLVGGWGGLNQTQLRKILAYSSIAHMGWMIAVMTYSPTLMLLNLSIYITMTLGTFMLFMFNSSTTTLSL---SLTWNKLPLITSLILIIMLSLGGLPPLSGFIPKWMIIHELTKNNMIITTMLMTITALLNLYFYMRLTYATALTMFPSTNNMKMKW-QFESTKNMTML-------PPLIVISTMLLPLTPMMSTLF---MN-MILTMLINVSLASLLILIAFWLPQLNIYTEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNNLETTLTMALALISLLAASLAYEWTEEG--LEWNE-MSMVYINIFLAFTLSFMGLLIYRSHLMSSLLCLEGMMLSLFVMMTVTILANHFTLANMAPIILLVFAACEAALGLSLLVMISTTYGTDYVQNLNLLQCMLKIIIPTMMLIPLTWLSKPNMIWINMTAHSMLITLISL-TYLNQLTDNNLNFS-LLFFADSLSAPLLMLTTWLLPLMLMASQYHLSNETLTRKKLYITMLIMLQLFLIVSFTATELIMFYILFEATLVPTLIIVTRWGNQTERLNAGLYFLFYTLVGSLPLLIALLWIQNNMGTLNLLIIQYWVQPLS-NSW-----SNALLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITVLLNP-LTSYMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAVLIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLVGELFVVMSSFSWSNITIVLMGVNITITALYSLYMLITTQRGKYTHHIKNIKPSFTRENSLMALHLLPLLLLSLNPKIILGPIY------MNLFTSS-MLVTLLMLTFPIMMT---STSMYTN-KLYPQYVKTA-ISYAFMTSLIPTMMFLHLGQDTMISNWHWITIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGLILAMAWFLTNLNTWDFQQIFMTNHE-NLSTPLVGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKMMQTITLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPFTTTSLVVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLLTLVATS-MTAAYSTRIMFFALLGQPRFNPIITINENNPLLINSIKRLLFGSIFAGFLISYNITPTTTPQMTMPHYLKMMALAVTILGFILALELNLMMQSLK--FKYPSSLFKFSNMLGYFPTIIHRLMPKTSLLMSQKSASTLLDMAWLEKILPKSISHFQMKSSI--TISSQKGLIKLYFMS---FMLTL--TLSLLAL----------NFHE---- +>Ctenomys_leucodon_white-toothed_tuco-tuco +----MNENLFSFFITPT-LMGMPIIILIIMFPIILFPSPK-QLINNRATTFQQWLLKLILKQMMSMHNIKGRTWALMLISLMLFIGTTNLLGLLPYTFTPTTQLSMNLSMAIPLWAGTVILGFRYKTKMSLAHFLPQGTPTPLIPMLTIIETISLFIQPLALAVRLTANITAGHLLMHLIGGATSALLS-ISFPTAMITFIILLLLTILEFAVALIQAYVFTLLVSLYLYDNTMPQLDTSTWFITILSMI-TTLFILFQIKISMHLFPM-SLQQP-QQMLIKQ-KTP-W-EKKWTKIYSP-FL-SHQL----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLEDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVHLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFTGYTLDPTWAKVHFFIMFAGVNITFFPQHFLGLSGMPRRYSDYPDAYTFWNMISSMGSFISLTAVMVMVFMVWEAFASKREVTTTELTSINLEWLHGCPPPYHTFEEPTYIKT-L--------MAYPYELGFQDATSPIMEELLQFHDHTLMIVFLISTLILYLISLMLTTKLTHTNTMNAQEVETIWTILPAIILIMIALPSLRILYMMDEVNNPLLTVKTMGHQWYWSYEYTDYDELNFDSYMIPTTELKPGELRLLEVDNRVVLPMELPVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTILTSTRPGLFYGQCSEICGSNHSFMPIVIEMVPLKTFENWCTSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSITVLLLSMITNLMTMYQWWRDVVRESTYQGHHTSTVQKSLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGYWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKQMTQALTITIILGVYFTLLQISEYLESSFTISDGIYGSTFFVATGFHGLHVIIGSTFLMTCLLRQLYFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNTRKSHPLIKIVNHSFIDLPAPSNISAWWNFGSLLGMCLGLQILTGLFLAMHYTADTTTAFSSITHICRDVNYGWLIRYMHANGASMFFIFLYFHIGRGIYYGSYTFTDTWNMGVLLLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPTLVEWIWGGFSVDKATLTRFFAFHFILPFIITAMVMIHLLFLHETGSNNPSGMNSNSDKIPFHPYYTIKDILGALFMIITLMSLVMFSPDLLGDPDNYAPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALASSILILMLFPILHLSKQRSMSFRPLSQCLMWMLVTNLLILTWIGGQPVEYPFITIGQMASMTYFFTTLILMPLTALMENKLL---KW--------MY--------MINFMSLIIPILLAMAFLTLLERKTLGYMQLRKGPNIVGPYGILQPMADALKLFTKEPLYPSTSSIFLFTIAPSLALTLALSMWIPLPMPYPLINMNLGALFILATSSLAVYSIIWSGWASNSKYALLGALRAVAQTISYEVTLAIILLSVLLLNGSYNLTNLMMTQKNIWLILPTWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNILMMNALTTIIFFNSMPNLMTPELHSTNFMIKTLTLTALFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISMPIFTCNI-P-PQST-MNM-ALTTTIFTTLIMGTSITLTSSHWLLMWAGLEMNMLAIIPILMNKNNPR-SIEAATKYFLMQATASMIMLLSIILTMMFSGQW--SIMYSTNQMISLILTISLIMKLGLTPFHFWVTEVTQGTSLTSGMILLTWQKIAPLSILIQIYPTINQPLIIAS-ATLSSLLGGWGGLNQTQLRKILAYSSISHMGWMLTIMFYNPSISLFNLLIYIMLTITMFSTLFINNNSAILSL---SHVWSTSPPVIIIILMNLLSLGGLPPMTGFSPKWVTIQELMKNDNIMISLIMTILALLNLYFYTRLTYSTTLTLFPSSNNTKTKW-YFNINKKMIMT-------PPLITLSTLSLPMTPIFMILN---MN-IIISLTTNYILTTILMTIAFWLPQLNIYMEKASPYECGFDPTEITRLPFSMKFFLIAITFLLFDLEIALLLPLPWAFQTSTINMTSWISISLILILSLGLTYEWLQKG--LEWTE-MTLTLLNITIAFIMSFLGIMMYRSHMMSSLLCLEGMMLSLFILSIIIMLNYHYTLAFSTPLILLVFAACEAAVGLALLVMISNTFWIDYVPNLNSLPCMLKIITPTNLPDPTGRLSHSSSMWINTTSYSLLIALISI-SYLNKIDITSINHS-TMFSSDSLSSPLIILTTWLLPLMIIASQYHLKNETEMRKKTYMTLLISLQLSLILTFTATEMILFYILFEMTLIPTLIIITRWGNQTERMTAGLYFLFYTLMGSLPLLITLIYLQNQLGTLNFLLFNYYNSLIN-YSW-----SNNLMWLTCTMAFMIKLPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRILQLLNP-ITDQMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIWIQTPWSFMGATSLMIAHGLTSSLLFCLANSNYERTHSRTMLLARGLQMLFPLMGTWWIIASLTNLALPPTINLFGELLIIMSTFSWCNMTLILTGINILVTALYSLYMLISTQRGKLPYHIHNLSPTFTRENILMSLHIIPLILLTLNPKIILGNLY------MNLLNTL-FIMTLTILTLPILTS---MSNIHKK-LPYAPYTKKI-ISLSFFLSLIPTFMLFYSNNEVTMLNWNWLPIQTFHLNINIKLDYFSILFMSVALFVTWSIMEFSLWYMHSDPYMDKFFKYLLLFLITMMFLVTANNLFQLFIGWEGVGIMSFLLIGWWYGRSDANTAALQAVLYNRIGDIGFILSMMWFLLYSNSWDFQQIFITQNK-INITPMLGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMQNNPTLQTMCLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLHKILPITSSSLMIGSLALTGIPFLTGFYSKDLIIETATTSYTNAWALTITLIATS-LTAMYSMRIIFFTLLNNPRFNFTISMNENNPTMINPIKRLAVGSVLAGFLMTYNIPITNLPQMTMPLQIKLATILSTILGFTIALELNMMTKNLK--MYYPTNYNTFSNLLGYFPTFAHRMAPYLDLSMSQNLASSTIDLIWLEKILPKSISKTQITASM--LSSTQMGLLKIYFLS---FLISM--SIISLLMF----------------- +>Manis_tetradactyla_long-tailed_pangolin +----MNENLFTSFTAPT-IMGIPITLIIIMFPIIMFPTPK-RLINNRIEAIQQWLLQQTTKQMMSIHNYKGQTWTLMLMSLIMFIASTNLLGLLPYSFTATTQLSMNLGMAIPLWAATVITGFRHKTKISLAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTANITAGHLLMHLIGSAIFALMS-INLTVATPTFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFIMITSMI-LTLFILFQLKLSKYEYPH-NTESM-TKFNPKT-SAP-W-TKKWTKIYSP-LS-LPQQL---MFINRWLFSTNHKDIGTLYLIFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSVKWSPALLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTLWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVLMVESTNTNLEWLHGCPPPYHTFEEPTFVNL-MKRE-----MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTNTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLAFDSYMVPTQDLKPGELRLLEVDNRLVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAVPGRLNQTTLMSPRPGLFFGQCSEICGSNHSFMPIVLEMVPLKTFENWSMSML----------MNQQTHSYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSVILLSLGLVTNLLTMYQWWRDIVREGTFQGHHTKTVQKGLRYGMVLFIISEVFFFIGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRSHMIQALFITISLGLYFTLLQISEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGCSFLIVCLLPQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLFKIINDSFIDLPTPSNISAWWNFGSLLGICLILQIMTGLFLAMHYTADTMTAFSSVMHICRDVNYGWIIRYIHANGASMFFICLFIHIGRGLYYGSFMYNETWNIGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPNLVEWVWGGFSVDKATLTRFFAFHFILPFIIAGLALVHLLFLHETGSNNPMGIISDSDKIPFHPYYTTKDILGLFLMIMTLMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVMSILILAIIPILHTSKQRAMMFRPLSQFMFWLLVGDLLTLTWIGGQPVEHPFILIGQVASILYFTLILVIMPVTSIIENKLM---K---------MS--------IINLLTTIIPVLLAVAFLTLAERKVLGYMQLRKGPNIVGPWGLLQPIADAVKLFTKEPLRPLTSSTMMFIMAPILALALALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGAIRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLIITQEKLWLLVPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNALSATLFLGAFHNSYNPSLYTTNFIMKVLILTMTFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWYISMPIAMSSI-P-PQT--MNP-LASTLILLTVFLGTMLILIANHWLMIWIGFEMNMLAMIPILMNKPSPR-AMEAATKYFLVQATASMLLMAAIAINLMYSGEW--VIMNVHNPTSSIIITMAMMMKLGMAPFHFWVPEVTQGTSLPSGMLLLTWQKIAPISVLYQIAPIINLNMVMAA-ALLSILIGGWGGLNQTQLRKIMAYSSIAHLGWMMAIMVYNPDIAILNLLIYILMTLSMFMVLSNNSTTTTLSL---SYLSSKAPLITITLLMILLSMGGLPPLSGFMPKWMIIQELTKNNMMMLPTFMAMTALLNLYFYLRLTYSTTLTMFPSSNNMKMMW-QFQSKKYTKLI-------SPLIILSTMILPLTPIMLTLT---MN-FLMMVMINILLASLLMLIAFWLPQLYVYSEKITPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIVLLLPLPWASQTSQLSTMLPMALFLLSLLAISLAYEWTQKG--LEWAE-MSLVHINVMLAFIISLIGMLMYRSHLMSSLLCLEGMMLSLFTMMAITVLNINFTLASMTPIILLVFAACEAALGLSLLVLVSNTHGTDYVQNLNLLQCMLKLIIPMIMLIPLTWLSNMNMMWINVTTHSMLISLISL-SALYHYDCTNMNFS-LTFFLDPLSAPLLVLTTWLLPLMLMASQSHLYNENLSRKKLFINLLIILQTMLVMTFSSSEMIMFYILKETTLVPTLIIITRWGNQTERLNAGYYFLFYTMVGSLPLLVVLIHTQNTMGTLNLLLLQFWAKSMM-NSW-----SSSLIWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITPLLEP-TTTSMAYPFLILSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIAAIMIQTPWSYMGATALMIAHGLTSSMLFCLANTNYERIHSRTMMLARGLQTLLPLMAAWWLLASLANLALPPSINLIGELLVVVSTFSWSNTTIMLTGMNIIITAIYSLYMLTSTQRSKYTHHINNIKPSFTRENSLMALHMMPLLMLSINPKIIMGFLY------MNTLTCS-LFMMLITLLMPVLTD---IMKLPMN-KNYPVYVKNM-VAISFIMSTIPMLMFIYSNKEVVIYNWHWMTIQTMKLCMSFKLDYFSMTFMPVALLVTWSIMEFSLWYMQSDPYINKFFKYLLIFLITMMILVSANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAAMQAILYNRIGDIGFLVAMAWFLMELNTWDIQQIFILDPK-DTNIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLLENNKAIQSTTLCLGAMTTLFAAICALTQNDIKKIVAFSTSSQLG--LMMTTIGINQPHLAFMHICTHAFFKAMLFMCSGSIIHNLGDEQDIRKMGGLFHALPTTTSALTIGSLALAGMPFLTGFYSKDLIIETINTSYTNAWALSITLLATS-MTAAYSTRMVFLVLLNQPRFAAPSAINENNPALISSLKRLMLGSIFAGFLLFNTIPPMNVLQMTMPHYLKLTALAITIMGLMMALELCKLSMNLQ--HANPSNTFKFSNSLGYFPMVIHRFMPSFTLMASQKLASLLLDLIWLEKVLPKSTSQFHMQTSALELVSNQKGLLKLYFLS---FMVTT--VLALLMF----------NYLE---- +>Chrysocyon_brachyurus_maned_wolf +----MNENLFASFAAPS-MMGLPIVMLIIMFPSILFPSPN-RLINNRLISIQQWLIQLTSKQMLAIHNQKGQTWALMLMSLILFIGSTNLLGLLPYSFTPTTQLSMNLGMAIPLWAGTVVTGFRYKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLVLIN-ISTTTASITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIFSML-LTLFILFQLKVSKHNYPE-NPMTK-TTKTTSQ-HIP-W-ENKWTKIYSP-LS-LPPQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMIWEAFASKREVAMVELTTTNIEWLHGCPPPYHTFEEPTYVIQ-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTVRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLEMVPLSYFETWSALMV----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHYNSMSLLMLGFTTNLLTMYQWWRDVIRESTFQGHHTPIVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFIATGFHGLHVIIGSTFLIVCFLRQLYYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLIKIINNSFIDLPAPSNISTWWNFGSLLGVCLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYMFMETWNIGVVLLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIVALAMVHLLFLHETGSNNPSGITSDSDKIPFHPYYTIKDILGALLLLLILMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILMFVPLLHTSKQRSMMFRPLSQCLFWLLTADLLTLTWIGGQPVEHPFIIIGQIASILYFTILLILMPTISIIENRLL---KW--------MF--------FINIISLIIPILLAVAFLTLIERKTLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSMSMFILAPILALSLALTMWIPLPMPYPLINMNLSVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHMWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNTLTTILFFGAFHNPLMPELYSINFTIKTLLLTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVALPIITAGI-P-PQT--MKP-PILIIIMTTIMTGTMIVMLSSHWLLIWIGLEMNMLAIIPILMKKYNPR-AMEASTKYFLTQATASMLLMMGVTINLLYSGQW--VVSKISNPIASITMTIALTMKLGLSPFHFWVPEVTQGVSLMSGMILLTWQKIAPMSILYQISPSINTKLLMLM-ALTSMLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMILNLILYILMTLSTFMSFMLNSSTTTLSL---SHMWNKFPLFTPIILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIVPTLMAITALLNLYFYLRLTYSTALTMFPSMNNMKMKW-QFEHTKKTTLL-------PPLIIISTMMLPLTPMLSILD---MN-MMLTLMTNVTLASLLVLIAFWLPQLNIYAEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLTTMLIMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYINIFLAFILSLMGMLIYRSHLMSSLLCLEGMMLSLFVMMSMTILNNHFTLASMMPIVLLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTTMLIPLVWMSKSSMIWINTTVYGLLISLISL-SYLNQPTDNTLNFS-LVFFSDSLSAPLLALTTWLLPLMLMASQSHLSKEPLIRKKLYISTLIFLQLFLIMTFTASEFILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALLYIHNSMGSLNFLMVQYWIQALP-NSW-----SNVLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLNP-LTNFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERVHSRTMILTRGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNITIILMGINITLTALYSLYMLITTQRGKYSHHIKNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPI-------MNMLTSC-MITVLIILTLPIFMT---FTKLYKN-KLYPHYVKTA-TSYAFMISMIPTMTFIYSGQETIVSNWHWMTIQTMKLSMSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPHINRFFKYLLMFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMTMAWFLLNLNTWDFQQIFITMNN-NLNLPMLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQNQTIQTLTLCLGAITTLFTAVCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLFKALPFTTTSLIIGSLALTGMPFLTGFYSKDLIIESANTSNTNAWALLITLVATS-LTAAYSTRIMFFALLGQPRFSPMIFINENNPLLINSIKRLLIGSVFAGYIISHSITPTTIPQMTMPHYLKMTALTVTLLGFILALELNLTTQGLK--FNYPSNYFKFSSLLGYYPTIMHRLTPKASLTISQKSASTLLDSIWLESILPKSISYFQIKSSI--LISNQKGLIKLYFLS---FMLTM--ILSLLIL----------SYHE---- +>Gazella_spekei_Spekes_gazelle +----MNENLFTSFITPM-ILGLPLVTLIVLFPSLLFPTSS-RLVNNRLISLQQWVLQLVSKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYH-NPEPT-SAKTLKQ-STP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSARPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDVVRESTFQGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINTRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILVLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHMSKQRSMMFRPISQCLFWILAADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPAASTIENNLL---KW--------MF--------MMNILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWMIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILTTILLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMELFNPTASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISTSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKAPVMTILILTTLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPITKQMTLL-------PTMVTLSTMLLPLTPILSILE---MN-LMLALLTNLTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLSTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIFPTMMLMPLTWLSKSSMIWINSTSHSLMISFTSL-LLMNQFSDNSLNFS-LIFFSDALSTPLLILTMWLLPLMLMASQHHLSKESLTRKKLFITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYIQNTAGSLNFLILQYWVQPMS-NSW-----SNVFTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTLLLNP-VTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQMFLPLMATWWLLASLTNLALPPSINLIGELFVVMSTFSWSNITIVLMGLNMVITALYSLYMLITTQRGKYTYHINNILPSFTRENTLMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLVTLLLLTTPIMMT---SSDTYKT-SNYPLYVKTT-ISCAFLTSMIPTMMFIHTGQEMVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLMNLNTWDLQQIFMLNPN-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPMTVPQMTMPYYLKTMALAVTILGFILALEISNTTYNLK--FKYPSNAFKFSNLLGYYPTIMHRLTPYMNLTMSQKSATSILDLIWLENILPKTTSLIQMKMST--VVTNQKGLIKLYFLS---FLITI--LVSTILL----------NFHE---- +>Nanger_soemmerringii_Soemmerrings_gazelle +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLMSNRLISLQQWALQLVSKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYH-NPEPT-PTKTLKQ-STP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSVALLMLGLTTNMLTMYQWWRDVIRESTFQGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINTRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLVLALMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASITYFLLILVLMPVASTIENNLL---KW--------MF--------MVNILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWMIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILATVLLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPIMTVLVLATLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSITKQMTLL-------PTMVTLSTMLLPLTPILSILE---MN-LMLALLTNLTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMVAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMVPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIFPTMMLMPLTWLSKSSLIWVNSTTHSLLISFTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQTFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYVQNTAGSLNFLILQYWVQPLS-NSW-----SNVFTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQMFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTYHINNILPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLVTLLLLTVPIMMT---SSDTYKT-SNYPLYVKTT-ISCAFLTSMIPTMMFIHTGQEMVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLMNLNTWDLQQIFMLNPS-NSNLPLIGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPMTVPQMTMPHYLKMMALAVTILGFILALEISNTTYNLK--FKYPSNAFKFSNLLGYYPTVMHRLTPYANLMMSQKSASSILDLIWLENILPKTTSLIQMKMST--AVTNQKGLIKLYFLS---FLVTI--LVSTILL----------NFHE---- +>Eudorcas_rufifrons_Red-fronted_gazelle +----MNENLFASFITPV-ILGLPLATLIVLFPSLLFPTSN-RLMNNRLISLQQWALQLVSKQMMSIHNPKGQTWALMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAVPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYH-NPEPT-PTKMLKQ-STP-W-ETKWTKIYLP-LS-LPL-----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTILLMLGLTTNMLTMYQWWRDVIRESTFQGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINTRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYMHANGASMFFICLFMHVGRGLYYGSYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDTDKIPFHPYYTIKDILGALLLIMALMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPVASTIENNLL---KW--------MF--------MVNILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWMIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILTTVLLGTIIVMISSHWLLIWIGFEMNMLTIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLYNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFLLFMANSTTTTLSL---SHTWNKTPVMTVLVLATLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSITKQMTLL-------PTMVTLSTMLLPLTPILSILE---MN-LMLALLTNLILATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIFSTMMLMPLTWLSKSSLIWINSTTHSLLISFTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQHHLLKENLTRKKLFITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYIQNTAGSLNFLIIHYWVQPMS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRVTLLLNP-VTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQMFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTYHINNISPSFTRENALMSLHILPLLLLSMNPKIILGPLY------MNMFSSF-TLVTLLLLTAPIMMT---SSDTYKT-SNYPLYVKTI-ISCAFLTSMIPTMMFIHTGQEMVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLMNLNTWDLQQIFMLNPN-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKSAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPALIIINENNPFLINSIKRLLVGSLFAGFIISNNIPPMTVPQMTMPYYLKTMALAVTILGFILALEISNMTYNLK--FKYSSNAFKFSNLLGYYPTIMHRLTPYANLTMSQKSASSILDLIWLENILPKTTSLIQMKMST--VVTNQKGLIKLYFLS---FLVTI--LVSMILL----------NFHE---- +>Gazella_leptoceros_Rhim_gazelle +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLMNNRLISLQQWVLQLVSKQMMSIHNPKGQTWALMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYH-NPEPT-SAKTLKQ-STP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSARPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDVVRESTFQGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINTRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATALMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILVLTLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPAASTIENSLL---KW--------MF--------MVNILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWMIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-ITFIIILTTVLLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMELFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISTSINLDLILTL-SILSISIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPIMTILVLATLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPITKQMTLL-------PTMVTLSTMLLPLTPILSILE---MN-LMLALLTNLTLATLLVTIAFWLPQMNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTSLSTMLTMALLLIFLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIFPTMMLMPLTWLSKSSMIWINSTSHSLMISFTSL-LLMNQFNDNSLNFS-LIFFSDALSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYIQNTAGSLNFLILQYWVQPML-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTLFLNP-VTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQMFLPLMAAWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIVLMGLNMVITALYSLYMLITTQRGKYTYHINNILPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLLLLTIPIMMT---SSDTYKT-LNYPLYVKTT-ISCAFLTSMIPTMMFIYTGQEMVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMYSDPHINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLVNLNTWDLQQIFMLNPN-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPMTVPQMTMPYYLKTMALAVTILGFMLALEISNTTYNLK--FKYPSNAFKFSNLLGYYPTIMHRLTPYMNLTMSQKSATSILDLIWLENILPKTTSLIQMKMST--TVTNQKGLIKLYFLS---FLITI--LVSTILL----------NFHE---- +>Gazella_gazella_mountain_gazelle +----MNENLFTSFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLMNNRLISLQQWVLQLVSKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYH-NPEPT-SAKTLKR-STP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSARPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDVIRESTFQGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINTRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILVLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPAASTIENSLL---KW--------MF--------MVNVLMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWMIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFIIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILTTVLLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMGLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSILYQISTSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPIMTTLVLTTLLSMGGLPPLSGFMPKWMIIQEMTKNENIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPITKQMTLL-------PTMVTLSTMLLPLTPILSILE---MN-LMLALLTNLTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLSTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIFPTMMLMPLTWLSKSSMIWINSTSHSLMISFTSL-LLMNQFSDNSLNFS-LIFFSDALSTPLLILTMWLLPLMLMASQHHLLKENLTRKKLFITMLVLLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYIQNTAGSLNFLILQYWVQPMS-NSW-----SNVFTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTLFLNP-VTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPSINLIGELFVVMSTFSWSNITIVLMGLNMVITALYSLYMLITTQRGKYTYHINNILPSFTRENMLMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLVTLLLLTIPIMMT---SSNIYKT-FNYPLYVKTT-ISCAFLTSTIPTMMFIHTGQEMVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPHINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLMNLNTWDLQQIFMLNPN-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPALIIINENNPFLINSIKRLLIGSLFAGFVISNNIPPMTVPQMTMPYYLKTMALAVTILGFMLALEISNTTYNLK--FKYPSNAFKFSNLLGYYPMIMHRLTPYMNLTMSQKSATSILDLMWLENILPKTTSLIQMKMST--AVTNQKGLIKLYFLS---FLITI--LVSTILF----------NFHE---- +>Gazella_cuvieri_Cuviers_gazelle +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLMNNRLISLQQWVLQLVSKQMMSIHNPKGQTWALMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYH-NPEPT-SAKTLKQ-STP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPAYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSARPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDVVRESTFQGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINTRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILVLTLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPAASTIENSLL---KW--------MF--------MVNILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWMIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-ITFTIILTTVLLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMELFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQTSTSINLDLILTL-SILSISIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPIMTILVLATLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPITKQMTLL-------PTMVTLSTMLLPLTPILSILE---MN-LMLALLTNLTLATLLVTIAFWLPQMNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTSLSTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMTAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIFPTMMLMPLTWLSKSSMIWINSTSHSLMISFTSL-LLMNQFNDNSLNFS-LIFFSDALSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYIQNTAGSLNFLILQYWVQPML-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTLFLNP-VTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQMFLPLMAAWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIVLMGLNMVITALYSLYMLITTQRGKYTYHINNILPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLLLLTIPIMMT---SSDTYKT-LNYPLYVKTT-ISCAFLTSMIPTMMFIYTGQEMVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPHINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLVNLNTWDLQQIFMLNPN-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPMTVPQMTMPYYLKTMALAVTILGFMLALEISNTTYNLK--FKYPSNAFKFSNLLGYYPTIMHRLTPYMNLTMSQKSATSILDLIWLENILPKTTSLIQMKMST--TVTNQKGLIKLYFLS---FLITI--LVSTILL----------NFHE---- +>Gazella_bennettii_chinkara +----MNENLFTSFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLMNNRLISLQQWVLQLVSKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYH-NPELT-STKTLKQ-STP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFTIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSARPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDVIRESTFQGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINTRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLMLQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHMSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPVASTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWMIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSV-P-PQT--MNP-IIFIIILTTVLLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMELFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISTSINLDLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPIMTVLVLTTLLSMGGLPPLSGFMPKWMIIQEMTKNDNVILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPITKQMTLL-------PTMVTLSTMLLPLTPILSILE---MN-LMLALLTNLTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSSTYGTDYVQNLNLLQCMLKFIFPTMMLMPLTWLSKSSMIWINSTSHSLMISFTSL-LLMNQFNDNSLNFS-LIFFSDALSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELVFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYIQNAAGSLNFLILQYWVQPMS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTLFLNP-VTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQMFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIVLMGLNMVITALYSLYMLITTQRGKYTYHINNILPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLVTLLLLTIPIMMT---SSNTYKT-SNYPLYVKTT-ISCAFFTSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMYSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLMNLNTWDLQQIFMLNPN-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTESNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLVATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPMTVPQMTMPCYLKTMALAVTILGFTLALEISNTTYNLK--FKYPSNAFKFSNLLGYYPTIMHRLTPYMNLTMSQKSATSILDLIWLENILPKTTSLIQMKMST--AITNQKGLIKLYFLS---FLITI--LVSTILL----------NFHE---- +>Suncus_murinus_house_shrew +----MNENLFSSFATPT-MMGLPIVILIVLFPSIMFPMPN-RLITNRLTTLQQWLIQLTSKQMMAIHNHKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLSN-ISPTTALITFIILMMLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTIISML-ITLFIVFQLKISNFLYPN-TPEIK-SLKTLKQ-STP-W-EIKWTKIYSP-LS-LPQQ----MFITRWLFSTNHKDIGTLYMVFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFIMIFFMVMPIMMGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGSINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIAGFVHWFPLFTGYSLSPTWAKIHFAIMFIGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVIVMVFMIWEAFASKREICSVELTSTNIEWMYGCPPPYHTFEEPTYINA-K--------MAYPFQMGLQDATSPIMEELMNFHDHALMIVFLISSLVLYVISAMLTTKLTHTNTMDAQAVETIWTILPAIILIMIALPSLRILYMMDEINNPTLTIKTVGHQWYWSYEYTDYDELNFDSYMIPASELKPGDLRLLEVDNRAVLPMEMTIRVLVTSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLATRPGVYYGQCSEICGSNHSFMPIVLELVPLKIFEKWSSSMI----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSMNLMLMGLLANILTMYQWWRDVVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTHELGGYWPPAGIKPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHTIQALFITIALGVYFTLLQAAEYYEAPFTISDGVYGSTFFMSTGFHGFHVIVGSTFLMICLLRQFKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNSSFIDLPAPSNISSWWNFGSLLGICLIAQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGFYYGSYMFLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIVTALAGVHLLFLHETGSNNPSGLNSDTDKIPFHPYYTIKDILGALIMITALSSLVLFSPDMLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILMVVPLLHTAKQRSMIFRPMSQCMFWMLVADLFTLTWIGGQPVEYPFVVIGQLASVIYFLMILLIMPITSVIENKLL---KW--------MF--------MVNLLILIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFIKEPLRPLTSSVSMFIAAPILALTLALTMWLPLPMPYSLINMNLGVLFLLAVSSLSVYSILWSGWSSNSKYALIGALRAVAQTISYEVTLAIILLSILLMSGSYSLGNLIITQEYVWLFLASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFLGAFHNFHWPELYSINFTMKALLLTASFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVALPIFTSSI-P-PQL--MNP-MIFYILLGTIMLGTSIVMTSTHWFMTWLGFEMNMMAIIPVLMKKYNPR-STEAATKYFLTQATASMILVLAIIINLMYSGQW--TITDIENNTASILITIALMMKLGLAPFHFWVPEVTQGVSLNSGLILLTWQKIAPLSLLYQMYSSMNINLLLMM-SLLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMMTMMIFNPNISLLNLLIYIIMTSSMFLLLIFSSTTSTLSL---SLTWNKSPIIAMSSLIILLSLGGLPPLTGFMPKWLIIQELTKNNNVILPTLMAVLALLNLFFYMRLSYSTTLTMFPTTSNTKLTW-QFQNMNILPMM-------MPLISISTLTLPLTPLFILLN---MN-MLLALTTNILLASLLVTIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWATQTNNLNTMIIMALTLISLLAMSLAYEWLHKG--LEWTE-MSLVHMNTALAFSISMLGLLMYRAHLMSSLLCLEGMMLSLFIMGVMMILITHFTLSNMLPIVLLVFAACEAAVGLSLLVMVSNTYGADFVQNLNLLQCMLKLIIPSIMMIPLTWLSNKKNLWINTTLYSLLIALVTL-NLFYCPNSYTLYFS-PTFSSDSISTPLLALTTWLLPLMIMASQNHLMNETETRKKTYLTMLIMLQIFLMLTFSATELILFYILFEATLVPTLILITRWGNQTERLNAGLYFLFYTLIGSLPLLVALVYIQNLLGTLNISITHLLTQNIM-NSW-----SNNFLWLACMMAFLVKMPLYGLHLWLPKAHVEAPVAGSMVLAAVLLKLGSYGMMRITTLLNP-LTEFMLFPFLTLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGAMTLMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPIMAAWWLLASLTNLALPPTINLIGELFVILSSFSWSYITMLLMGLNVVITALYSLYMLIMTQRGKYSQHIQSINPSFTRENALMALHMLPLLLLTLNPKLILGPTF------MN-FLNS-MLISLSMLILPVGMA---YSPIYNS-NKYPYYVKTI-ISYAFFTSLIPTLLFINSGHEAIISNWHWMTIQTIKLTLSFKLDYFSLLFMPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAILYNRIGDVGFILAMAWFIFHSNSWELHQIFLTNTT-HNNLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLIIRFYPLVENNTLAKTLILMLGALTTLFAAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTTTSLIIGSLALTGTPFLTGFYSKDLIIETANTSNTNAWALLITLIATT-LTAVYSTRILYYTLLGQPRFNSLILINENKPLLINSIKRLLIGSIFAGFIISLNLPLMTTPQMTMPVYLKLTALLITLTGFILALELNLMTQNLK--MPPIQNHYNFSNMLGYFPITMHRIIPSSSLLMSQKLASMILDLTWIEMTLPKLISIVQKVYST--AVSSQKGLIKSYFLS---FMFTL--FISLIML----------NFPV---- +>Grampus_griseus_Rissos_dolphin +----MNENLFASFMIPI-MLGIPITTLIIMFPTMLFPTPN-RLINNRVIAIQQWLTKLTSKQLMITHSPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNLGMAIPLWAGTVFMGFRNKTKMSLAHLLPLGTPTFLIPMLVMIETISLFIQPLALAVRLTANITAGHLLLHLIGSATLALMS-INLFTALITFIILTLLVILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMI-FTLFALLQLKISKHFYSP-SPKPM-DTKLQKQ-QTP-W-NHTWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQLYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWTKVQFMIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFEEPVYINR-KYS------MAYPFQLGLQDAASPVMEELLQFHDHALMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTVLPAVILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMVLPMQMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSMILLTLSFLTNTLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALLITITLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWFIRYLHANGASMFFICLYAHIGRGLYYGSYMFQETWNIGVLLLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVAVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGALLLILTLLTLTLFTPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILIFIPMLQTSKQRSMMFRPFSQLLFWTLIADLLTLTWIGGQPVEHPYIIVGQLASILYFLLILVLMPTISLIENKLL---KW--------MF--------MINILTLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFMIAPVLALTLALTMWAPLPMPHPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLNTTQEKLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGAFHDPLTPELCTTNLIVKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTAGI-P-PQT--MNP-FVSITLLTTLVLSTTIVTISSHWLFAWIGLEMNMMAIIPIMMKKPNPR-ATEASAKYFLTQATASSLLMLAIIINLMHSSQW--TIMKLFDPTASILMTMALAIKLGLSPFHFWVPEVTQGIPLSTGLILLTWQKLAPISILYQISPSINLYLMITM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILLYNPTLTLLNLLIYIMMTFTMFMLLIQNSTTTTLLL---SQTWNTMPIMTTFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPTLMAITALLNLYFYMRLAYSTALTLFPSTNNMKMKW-QFYPTKQMTLL-------PTAIVLSTMLLPLTPTLFVLL---MN-LLLTLLTNTTLALLLMLIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLTTMLLMALFLISLLAASLAYEWTQKG--LEWDK-MSLVHINILIAFTVSLTGLLMYRSHLMSALLCLEGMVLSLFILAALTILNTHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKGNYIWINTTTHSLLISFTSL-LLLNQFNDNSLNYS-LTFFSDPLSAPLLMLTMWLLPLMLMASQSHLLKEPLARKKLYITMLIMLQILLIMTFTAMELIMFYITFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALMYLQNTVGSLNFLLLQYWAQPLS-TSW-----SNTFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTEHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQIFFPLMATWWLLACLTNLALPPTINLIGELLVIMSTFSWSNLTIILMGMNIVITALYSLYMLIMTQRGKHTHHINNLTPTFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSS-TLLTLLMLIAPVMAS---STNFYKN-NKYQHYVKNM-TLLAFITSLIPMMMFTHTNQEMLISNWHWITIHTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLHNTNAWDLQQIFTLNQN-PPILPLMGLTLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQTMMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALIIGCFALTGMPFLTGFYSKDLIIEAATSSYTNAWALLLTLIATS-MTAIYSTRIIFFTLLEQPRFSPLMNINETNPMLINPIKRLLIGSIFAGFILSNSMPPMNTPLMTMPLYLKLTALMVTILGFILAFEINTYSKNLK--YPYSPDSTKFSTLLGYFPTIMHRLPPHLILTMSQKFATSLLDLTWTEMILPKTTALIQLKAST--LTSNQKGLIKLYFLS---FLITM--TLSMLLF----------NYPE---- +>Cervus_nippon_centralis_Hondo_sika_deer +----MNENLFTSFITPM-ILRLPLATLIVMSPSLLFPTSN-RLVNNRLISLQQWMLQLVSKQMMGIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGAALALMS-ISTTMALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LTLFIIFQLKISKHNFHF-NPELM-STKTQKQ-NTP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPAYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPSLTVKAMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGILLLVLFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIIIGQLASVLYFFIILVLMPITSTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYPLIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPVLPELYTINFIMKSLLLTTSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPISTSSI-P-PQT--MNP-AIFILILLTMMMGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEAATKYFLTQSTASTLLMMAVIINLMFSGQW--TVMKLFNPVASMFMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTSHKMPVMTILVLITLLSMGGLPPLSGFVPKWMIIQELTKNDSLILPTIMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSILE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMASARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVALAGLLMYRSHLMSSLLCLEGMMLSLFVMASLTILNSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFSDNSLNFS-LMFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNITGSLNFLVLQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGSLY------MNLFSSF-TLVTLLLLTIPIMTT---SSDNYKT-SNYPLYVKTT-ISYAFITSMIPTMMFIYTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFALTPN-NSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLMATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTIPQLTMPYYLKMMALTVTILSFILALEISNMTQNLK--FNYSTNIFKFSNMLGYFPTIMHRLAPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQTKMSI--MVTNQKGLIKLYFLS---FLVTI--TISMVLF----------NFHE---- +>Echinops_telfairi_small_Madagascar_hedgehog +----MNENLFTSFSTPT-LMGLPIIIMIIAFPALLYPTSN-RLISNRIRTLQQYLINLILKQMMAIHSPKGRTWSLMLMSLIIFIASTNLLGLLPHTFTPTTQLSINLGLAIPLWAGAVILGFRYKFKTSVSHFLPQGTPILLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGAATLALFS-ISTSTALITFIILLLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSPWLISILSMSDLRLYLLMPIKISKILINN-DINCH-PSEITKS-TNP-W-NNKWTKIYLP-HS-LPLH----MFMNRWLFSTNHKDIGTLYLLFGAWAGTVGTALSLLIRAELGQPGALLGDDQIYKLIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAMTQYQMPLFVWSVAITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGDIKWSPAMMWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFTGYTLSEAWAKAHFIIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNSVSSVGSFISLTAVILMIFMTWEAFASKREVTSVNLIHTNLEWIHGSPPPFHTFEEPVYMKS----------MAYPSQLGFQDASSPIMEELLYFHDHALMIVFLISSLVLYVILAMLSTKLMHTNTMDAQVIETIWTILPAVILVLIALPSLRILYMMDEINNPTITVKTLGHQWYWSYEYTDYEDLMFDSYMIPSEELKPGDLRLLEVDNRVVLPMELTIRMLISSEDVLHSWAMPSLGLKTDAIPGRLNQATLSSTRPGLFYGQCSEICGSNHSFMPIILEMVPLKIFESWSSSMV----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLAIWFHYNSPLLLLIGLTTNLLTMYQWWRDIIRESTFQGHHTPFVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTAILLASGVTITWAHHSLMEGNRKQMIQALSITIALGIYFTLLQASEYYETPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCLLRQVMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINSSFIDLPAPTNISSWWNFGSLLGICLVLQIITGLFLAMHYTSDTITAFSSIAHISRDVNYGWLIRYLHANGASLFFICLYLHIGRGIYYGSYMFSETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSNLVEWIWGGFSVDKATLTRFFAFHFILPFIVTALVIIHLLFLHESGSNNPTGIISDSDKIPFHPYYTIKDLLGLMVMIMFLLMLVLFTPDLLGDPDNFTPANPLITPPHIKPEWYFLFAYAILRSIPNKLGGVLALMTSILILALIPLLHTAKQRSLMFRPLSQILFWILTADLLALTWIGGQPVEDPYIIIGQLASITYFTIILVIMPLSGVIENNLL---KW--------MF--------IINLLSLIVPILLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLFQPFADAIKLFTKEPLRPMTSSMTMFLLAPILALSLALTLWVPLPMPHSLVNLNLSLLFILAMSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVSLAIILLSVMLFNGSFSLSSLTITQEHLWLLVPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFSFAEYANIIMMNALTTILFMGAFHNMSVTEIYTLNFITKTLLLTMLFLWVRASYPRFRYDQLMHLLWKNFLPMTLALCMWYISIPVMLASI-P-PQM--MNP-LASIIMSSTLISGTLITLISSHWLMAWMGLEMNMFAIIPMIMKNNSPR-AIEAAMKYFLIQASASMLLLMAASLNFMYSGQW--TLTEMNVSMASLIMLIAMLMKLGMAPFHFWVPEVTQGTVLLTSLIILTWQKLAPLAILFQITPSINVNIILTT-AILSILIGGWGGLNQTQLRKIMAYSSIAHMGWMAAVMIYNPTLMLLNLLLYLIFTFSAFTILIKCSSTSTSML---TMTWNSYPLMVSILLIILLSMGGLPPLTGFVPKWLIIYELIKNTNIAMTLTMSILALLNLFFYLRLIYASSLTLFPTSSNLKFKW-KINTPNKMYFL-------PTMVSISLLFLPVSPMILMLS---MN-LMITVTINVLLASLLVLIAFWLPQLNLYIEKASPYECGFDPMSSARLPFSMKFFLIAITFLIFDLEIALLLPLPWAIQSNNLMLMLSMALFLVVILPLGLAYEWTQKG--LEWME-MPVIYINLIAAFFMAFMGLLIYRSHLMSSLLCLEGMMLSLFILNSTLALSMHFTLYSMMPIILLVFAACEAALGLSLLVMVSNTYGLDYVQNLNLLQCMLKLIIPTLMLIPLTWLSNNKNLWINTLMYSFMLTPISL-LLLNQTSDTSLNMS-ILFFSDPLSTPLIILSSWLLPLMLLASQSHMSKESETRKKYYITMLIVLQLFLFMTFSATEMMLFYILFESTLIPTLIIITRWGNQTERLNAGVYFLFYTLMGSLPLLIVLTYIYNNLGTLNLLILPYYIMPLP-FLW-----SSKLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIFLDP-ITLNMSYPFLMLSLWGMLMTS--SICLRQVDLKSLIAYSSVSHMALVIVAILIQTPWSFMGASTLMIAHGLTSSMLFTLANTNYERTHSRTMILARGLQTMLPVMASWWILASLTNLALPPTINLIGELLIISSSFSWSNITMLLMGLNMLMTASYTLYMLIMTQRGNVNPHIKFVLPSFTRENTLMALHMLPLLLLTLNPKIIMGPTF------MNTLSIF-TLLSLIILLIPIIMS---LLNYPNP-NLLPSYVKHA-VSYSFFLSMIPLLLFTSTYPETMISNWHWMSVHTFNLCLSFKLDYFSLIFIPVALYVTWSIMQFSVWYMHSDPNIDRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWHGRSDANTAALQAIIFNRIGDVGLILAMAWFFNNFNSWEFQQIFLLNP--PNNIPLLGLLLAAMGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLYQNNSTMQTLILCVGALTTLFTAVCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFMHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKLMPFTSSSLTIGSLALTGTPFLTGFYSKDLIIEAMNLSHINAWALILTLIATS-MTAIYSTRIIYFALMNQPRFNSIITINENIMDLINPIKRLVIGSILAGFLISYSIPPTNYPLMTMPTYLKMAALTVTVLGFITATELNMLTTYLK--FSTPNMYYKFSNLLGYYPSIIHRLMPQTNLILSHKLASTAMDLIWLEKLLPKNISLISMTTAS--VISNQKGMIKFYSLT---FLFTL--TLTFLLMI----------------- +>Rattus_tanezumi_Oriental_house_rat +----MNENLFASFITPT-VMGLPIVVTIIMLPSILFPSSE-RLISNRLHTFQHWLIKLILKQMMLIHTPKGRTWALMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVILGFRHKLKSSLAHFLPQGTPISLIPMLIVIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTMLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISSM-ITLFILFQLKISSQTFPA-APSPK-IVATGKT-DNP-W-ESKWTKIYLP-LS-LPQQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLNDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVLVMIFMIWEAFASKREVLSVSYSSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAMSALLLTSGLVMWFHYNSTTLLSLGLLANILTMYQWWRDIIREGTYQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMNQALLITILLGLYFTILQASEYFETPFSISDGIYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLLKIINHSFIDLPAPSNISSWWNFGSLLGVCLMIQIITGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGMYYGSYTFLETWNIGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLNSDADMIPFHPYYTIKDLLGVFMLLLFLMTLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAFLPFLHTSKQRSLTFRPITQTLYWILVANLFILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIEDKML---KWN-------MY--------FINILTLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPTLSLTLALSLWVPLPMPHPLINLNLGMLFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQMLITTQEHIWLLIPAWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTSIVFLGPLYYINHPELYSINFMTETLLLSTAFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCVWYISLPIFLAGI-P-PYT--MNP-ITLIIIYFTIIMGPAITMSSSNLLLMWVGLEMSLLAIIPLLTNKKSPR-STEAATKYFLTQATASMIILLAIVLNYKQSGMW--TFQQQTNSMLFNMMLISLSMKLGLAPFHYWLPEVTQGIPMHIGLILLTWQKIAPLSMLYQIYQFLNPTITTIL-AISSVLIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPHNPNLTLLNLTIYILLTIPMFITLMMSSATSINSL---SLAWNKTPMILAMASIILLSLGGLPPLTGFLPKWAIISELLKNNCSILSTLMAIMALLNLFFYTRLIYSMSLTMFPTNNNSKMIS-HHPILKYNFIL-------PTLTVLSTLTLPLSSQLMT-----MN-LFIIITINITLSLILVSIAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTTNITTMTTTAFILVTILALGLSYEWAQKG--LEWTE-MTSAFLNLTLAFMMSLLGTFMFRSHLMSTLLCLEGMMLSLFIMTSTSTLNSNSMISMTIPITILVFAACEAAVGLALLVKISNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLTWLSNNKKTWTNVTSYSFLVSLASL-SLLRQNDENYLNFS-ITFSSDPLSTPLIILTTWLLPLMMLASQNHMKKENPMHQKLYISMLISLQILLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGVYFLFYTLIGSIPLLIALISIQNSMGTLNFLILSLTTQPLP-PTW-----SNNILWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRISMILDP-LTKSLAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAIMIQTPWSFMGATMLMIAHGLTSSLLFCLANTNYERVHSRTMIMARGLQMIFPLMATWWLLASLANLALPPLINLMGELFIVMATFSWSNPSIALMATNIVITGMYSMYMIITTQRGKLTSHMNNLQPSHTRELTLMALHIIPLMLLTVNPKLITGPTM------MNMMTSS-ILMILILLTAPIIIS---MTNLPKF-INFPSYATSS-IKFSFFLSLLPLLLFFHYNTEYMITNWHWLTINSIKLTMSFKIDYFSILFLSVALFVTWSIMQFSSWYMHSDPYINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRVGDVGFILAMTWFCLNMNSWELQQIFLT-NT-NNLVPLTGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFHPLTSNNSTIMTAMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGNMMKAMPFTSSCLIIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALMITLIATS-MTAVYSMRIIYFVTMTKPRYSPLITINENNPDLINPIKRLALGSIMAGFLISLNIPPTNIQVLTMPWYLKLTALLITILGFAIALELNNLTLNLS--MNKTTKLSSFSTSLGYFPSIMHRVIPQKTLNPSYKVSLNLLDLIWLEKAIPKSTSITQTHLSK--MMANQKGLVKLYFLS---FLITI--SMIFILHML---------NPEWFQ- +>Talpa_europaea_European_mole +----MNENLFASFITPT-MMGLPIVVLIIMFPSIMFPSPN-RLINNRLVSLQQWLIQLTSKQMMTIHNAKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTATALVTFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTILATI-TTLFILFQLKISKYIYPS-SPELK-SMKSLKH-NTP-W-ETKWTKIYSP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPILLGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAILAGFVHWFPLFTGYTLSQTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFASKREVSTVELTTTNIEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQFGFQDATSPIMEELLHFHDHALMIAFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMVPTADLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKHFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSTTLLCMGLLANSLTMYQWWRDIIREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTHELGGFWPPAGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQALFITIALGVYFTVLQAAEYYEAPFTISDGVYGSTFFMATGFHGLHVIIGTTFLTVCFIRQLKYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNSSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAGVHLLFLHETGSNNPSGLSSDTDKIPFHPYYTIKDILGALILIMALSSLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILVLALMPFLHTSKQRSMMFRPISQCLFWLLVADLFTLTWIGGQPVEHPFIIIGQLASILYFALILMLMPLASLMENNLL---KW--------MY--------MINLLTLIVPILLAVAFLTLIERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSISMFIIAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMSGSFSLSNLIITQEYTWLLFSSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNVLTTILFLGAFHNPYFPELYSINFMIKALFLTISFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPVSLSGV-P-PQ---MNP-LVFSLILFTVMLGTVIVLISSHWLMIWIGFEMNMLAITPILMKKFNPR-SMEAATKYFLTQATASMLLMLAIIINLTYSGQW--TTMKMTNDLASMMMTIAMIMKLGMAPFHFWVPEVTQGIPLTSGMILLTWQKIAPLSVLMQTAYSINTNLMLTT-AMLSIAVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIMTYNTTMTTLNLMIYMVLTLTVFMLLYINSSTTTLSL---SHLWNKAPLMSTLILLTMLSLGGLPPLSGFMPKWMIINELTKNGSTILPTIMAITALLNLYFYMRLTYSTSLTMFPSTNNMKMKW-QFENVKKTPML-------SPLVILSTMLLPLTPMLLILE---MN-MLLTITVNTLLSSILVLIAFWLPQLNTYSEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNDVKTVLTMALILISLLALSLAYEWTQKG--LEWTE-MSLVYMNIMIAFSISLLGLLMYRSHLMSSLLCLEGMMLALFILSTIMILNIHFTLASMIPIILLVFAACEAAVGLSLLVMVSNTYGVDYVQNLNLLQCMLKIIVPTIMLLPLTWLSKNNMIWINTTTYSLLISLLSL-THLNQQNDINMNFS-TTFFSDPLSAPLLVLTTWLLPLMLMASQFHLSNEHLTRKKLYISMLILLQVFLVMTFTATELILFYILFEATLVPTLIIITRWGNQTERLNAGMYFLFYTLVGSLPLLVALTYLQNFTGSLNLTIMQLLSVPLP-NEW-----ASILLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITVILSP-HTNFMAYPFMALSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMATWWLMASLTNLALPPTINLIGELLVMLSSFSWSNITMILMGLNMVITALYSLYMLIQTQRGKYTHHIVNINPSFTREHALMALHMIPLLLLTLNPKLIMGTMY------MNLLTSS-LLLSLLILILPIMTT---LTNKYKE-STFPAYVKST-ISYAFMISMIPALLFIHSGQETMISNWHWMTINSVKLSISLKLDYFSMVFMPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFVLSMAWFLFNSNSWELQQIFMTNTG-QNILPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNSTIQTLTLCLGAMTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLFKAMPFTTTALITGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATS-LTAVYSTRIMFFALLGQPRFSTMILINENSPLLMNPIKRLLMGSIFAGFVISNNLPPMTVPQMTMPLYLKLTALMVTILGFVLALELNTMTQYLK--FPHTSNSHKFSNQLGFFPIIVHRLLPTMSLVLSQKSASMLLDLTWMEAAIPKALSNIQMTAST--LVSNQKGLVKLYFLS---FLITL--VLSLALF----------SFHG---- +>Potorous_tridactylus_long-nosed_potoroo +----MNENLFAPFISPT-ILGITTLPIIMLFPCLLLSTPK-RWLPNRIQLLQIWLIRLITKQMMMMHNKQGRSWALMLMSLILFIASTNLLGLLPYSFTPTTQLSMNIGMAIPLWLATVLMGFRNKPKISLAHFLPQGTPTPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALSS-ISMTVSTITFTILFLLTILELTVAMIQAYVFTLLVSLYLHDNSMPQLDTSTWLLTIILMI-ISLFCIYQSKMINQTMTLIPPQDKKPPQ-PKI-QLH-W-EMKWTKIYLP-LS-SPLPS---MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPALSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTPFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYMLNDLWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNVISSIGSFISLTAVILMIFIIWEAFASKREVTSVELTTTNIEWLYGCPPPYHTFEQPVFVKV----------MPYPMQLGFQDATSPIMEELTYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTNTMDAQEVETIWTILPAVILVLIALPSLRILYMMDEIYNPYLTVKAMGHQWYWSYEYTDYEDLTFDSYMIPTQDLAPGQFRLLEVDNRVVLPMELPIRVLISSEDVIHAWTVPSLGLKADAIPGRLNQATLTSTRPGVYYGQCSEICGSNHSFMPIVLEMTTLKYFEKWSSMMQ----------MAHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSYLLLIIGLTCMLLTMYQWWRDIVREGTFQGHHTPVVQKGLRYGMVLFIVSEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRMQMIQALSITILLGLYFTILQAFEYYESSFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCLLRQFNYHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKTHPLIKIINHSFIDLPAPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNLHANGASMFFMCLFLHVGRGIYYGSYLYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIVALVVVHLLFLHETGSSNPSGINPDSDKIPFHPYYTIKDILGLMIMLLTLLALALFSPDMLGDPDNFSPASPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLLIPLLHTSKQRSLMFRPISQTLFWMLTADLITLPWIGGQPVEQPFIIIGQVASILYFSLIIILMPLAGLLENYMLK-PKW--------MF--------IINLLMYIVPILLAVAFLTLVERKVLGYMQFRKGPNIVGPYGLLQPFADAIKLFTKEPLRPLTSSMSMFIIAPILALTLALTIWTPLPMPHTLIDLNLGLLFILALSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKNLITTQENMWLIVSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIMAMNAMTTILFLGSSLNHNFSHLNTLSFMLKTIFLTFMFLWIRASFPRFRYDQLMYLLWKNFLPLTLALCLWFISIPIALSCI-P-PQI--MSP-YVLMIISISLLLGTSLTLFSNHWLLAWMGLEINTLAIIPMMTYPNHPR-STEAAIKYFLTQATASMMIMFSIIHNAWTTNEW--TIFQISNQTASILMTLALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKIAPTSLLYQISPTLNMKILIIL-GLTSTMLGGWGGLNQTHLRKILAYSSIAHMGWMTIIALINPSLMLLNLLIYIIATLTLFLMLNFASVTKIKSL---TNLWNKSTPMTMAILLTLLSLGGLPPLTGFMPKWLILQELVSNNNITIAILMAMSALLSLFFYMRIIYTSTLTMFPTTNNSKLQW-SYPQTKTINII-------PTLTIISSLFLPLTPMFISLTH-MIN-LIITLIINTLLSTIIVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWAIQLSSPNLTLVLAYCLIILLTAGLAYEWIQKG--LEWTE-MSSINLNLIMAFSLALMGVLIYRSHLMSTLLCLEGMMLSLFILMALLISHFHMFSASMAPLILLVFSACEAGVGLALLVKTSNNYGNDYVQNLNLLQCMLKILIPTIMLIPLTWYSKKPWVWINPTSHSLLISIASL-SLLYHSSDLGYSYS-NSFYMDSLSGPLIVLSCWLLPLMMIASQNHLMKEPLSRKKTYLTMLIILQSSLIMAFSSSELIMFYILFETTLIPTLIIITRWGNQNERLNAGLYFLFYTLVGSLPLLVALLYLQNNMGTLHILTVSMNPMTLN-FSM-----PNSILWYACMTAFMVKMPMYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITIFTEP-VTMQLSYPFMILSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMGLVIIAALMQSTLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQMILPLMCTWWLLASLANLALPPTINLLGELMVIISSFSWSNFTIILLGTNTVITAMYSLHMLITSQRGKFTHHLYPIKPTFTREHILMMLHMIPLLMISINPKFILGDHM------MNSIFNSLMLLSITMLTFPLIYN---LIFPHKT-NNFPLYCKTT-VKMAFFTSLPPLLLFINTGQESTITNWQWFSIESLNMTMSFKLDYFSIIFIPIALYVTWSILEFSLWYMHSDPFIHRFFKYLITFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWFGRTDANTAALQAVLYNRIGDIGFMLTMAWLMINNSSWDLQHIFMTDMS---TLALLGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIKNNPTILTIALCLGAITTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLNIMPITSSALLTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNTWALTITLMATT-LTAIYSLRIIYFALLNQPRFLPLSPINENHPNLTNPIIRLAIGSIFAGFILMMNIPPTSMVPMTMPPISKFSTLIVTILGVLIAAELNNMTNKMT--TTSYIHTHNFSNMLGYFTHLFHRSYPLANLYLGQHIATMLIDLNWYEKTGPKGQANLHSTISS-SISSTQKGLIKTYFLS---FIISI--PVIMMLI------------------ +>Aotus_azarai_Azaras_night_monkey +----MNQNLFTSFNIPM-MLGIPLVVLIILFPITLIMPSN-KLINNRLSSLQQWLIQLTLKQMMMVHTNKGRTWSLMLLALISFIALNNLLGLTPYAFTPTTQLSMNLGMAIPLWAATVFMGLRFKTKASLAHFLPQGTPVPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLLGDTALTLMS-IYVSSSTITIIIIILLITLELGVALIQAYVFTLLVSLYLHDNSMPQLDISPWPMVILSMI-AALFYFIQLKLLNFTFYN-TPLSK-PMKTQKH-KTT-W-ELKWTKIYLP-LS-MSQ-----MFMNRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRAELGQPGSLMEDDHVYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLNQTYAKIHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIISSVGSFISLTAVILMIFMIWEAFSSKRKVSTIEQLSTNLEWLYGCPPPYHTFEESTYVKTLVEKG-----MATPAQLGLQNASSPIMEELIAFHDHALMIIFLISSLVLYIISLMLTTKLTHTSTMNAQEIEMIWTILPAIILIMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYEDLAFDSYITPTYFLEPGEFRLLEVDNRTTLPMEADIRMLITSQDVLHSWAVPSLGVKTDAIPGRLNQAMLASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWASYLYIV--------MTHQTHAYHMVNPSPWPLTGALSAFLLTSGLVMWFHFYYTPLLATGLLASAMTMFQWWRDVVREGTYQGHHTPPVQKGLRYGMVLFIISEIFFFTGFFWAFYHSSLAPTPQTGGHWPPTGILPLNPMEVPLLNTAVLLASGVTITWAHHSLMEANRKESAQALFMTIALGAYFTYLQVSEYSETPFTISDGIYGSTFFMATGFHGLHVIIGTTFLATCYIRQQMYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTSPRKTHPLAKIINESFIDLPTPSNISSWWNFGSLLGICLIIQITTGLFLAMHYTPDTSTAFSSVAHITRDVNYGWMIRYMHANGASMFFVCLFLHIGRGLYYGSFLFLKTWNIGIILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFTFHFILPFIIAALATIHLLFLHETGSSNPSGMMSDPDKVAFHPYYTAKDILGLIFLLLSLMSLTLFMPDLLTDPDNYTLANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILMVIPMLHFSKQQSMMFRPITQILFWALVADLLTLTWIGGQPVEYPFVTIGQTASIMYFFIIITLMPLFALIENKLL---KW--------MF--------MINLLLLVIPALIAMAFLTLIERKILGYMQFRKGPNIVGPYGLLQPIADAMKLFTKEPLLPTTSATTLYVTAPTLALSIALLMWTPLPMPHPLINFNLGLLFMLATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFKLHSLIVTQEHSWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFLATSHNITMSELYTMNFVTKTVLLTSLFLWIRTAYPRFRYDQLMHLLWKKFLPLTLALCMWYISMPILMSGI-P-PQT--MNP-LAYLIISFTILMGTLITILSSHWFLIWMGLELNMLAIVPILAKNTSPR-STEASTKYFLMQATASMILLMAIFLNTLFSGQW--TISPSLNKILSTMMLIALVMKLGMAPLHFWLPEVTQGIPLIPAMLILTWQKLAPMSIILQIFPPMNLNILLVI-SILSIMIGSWGGLNQTQLRKILAYSSITHMGWMMAVLHYDPNITILTLIIYIFLTVSTFMMFYTNSNLTTLSL---SHSWNKLTWMMPMIPLMMMSLGGLPPLTGFSPKWAIMQELTKNENLIFPLTMAMLTLMNLYFYMRLMYSISMTMFPTSNNTKIDW-QLKYMKSTPLL-------SPLTVSSTLLLPVTPMMLMM----MN-LALTLATNILLALLLIIITFWLPQLNMYAEKHNPYECGFDPTTSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNLMLTINMIMALLVILALGLAYEWTQKG--LEWIE-MPFIYINVLLAYFMSLLGLLIYRSHLMSSLLCLEGMMLSLFIMATLTTLNMHLTLMYMMPIVLLVFAACEAAVGLALLVLISNLYGLDYVQNLNLLQCMLKIILPTIMMLPMMWLSKTHMMWINMMTSSLLISALTL-MSLYVPN-ISCNLS-LNFFSDPLTSPLLTLTAWLLPLMILATQQHLYNNPLPRKKLYMSMLILLQISLIMTFTATELILFYILFETTLIPTLIIITRWGYQPERLNAGSYFLFYTLAGSLPLLITLLYHLNNLGSLNMLTMMMYTKETL-LSW-----TNNVMWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITPILNP-LTEKMGYPFLILSLWGMIMTS--SICLRQADLKSLIAYSSVSHMALVILAILIQTPWSFTGAMILMIAHGLTSSLLFCLANSNYERIHSRTMMFTRGLQTLFPLLALWWLLANLANLALPPTINLMGELFTILASFSWSNFTIMFTGFNMLITALYSLHMFSSTQRGPLTYSTSNVKPLFTRENTLMIMHMAPILLLTMDPKTIMGLTP--------MHSSL-ILMTLIPLLAPIMIT---LINPHKN-SLYPHYVKLA-IIYALIISILSTTMFIFTGQESTISNWHWMTIQTIKLSMSFKLDFFSMMFTPVALFVTWSIVEFSMWYMSSDPNINQFLKYLLIFLVTMLILITANNLFQLFIGWEGMGIMSFLLISWWHGRTDANTAALQAILYNRIGDIGFILAMAWFFLYSNSWDFQQMFILDST-SNSFPLMSLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLIIRFHPLIENNLLTQTLILSLGAITTLFTAICAITQNDLKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLSAGSIIHSLNNEQDIRKMGGLFKTLPFTASSLVIGSLALMGTPFLTGFYSKDLIIETANTSYTNAWALTTTLVATS-LTAMYSIRIISHTMTEYPRFSTLITINENNPQLMNPINRLALGSIFAGFLISSCIPPTSQPQVTMPHYLKLMALSVTILGLFLAMELSFMTNNMK--LSTPVKTFYFSNMLGFYSITTHRLNPHSSLTASQNFTSTLLDLFWFEKAMPKLTMQTQISIST--TTSTQKGLIKLYFLS---FFIPP--TLALILTI----------------- +>Sus_scrofa_domesticus_domestic_pig +----MNENLFASFIAPT-MMGLPIVTLIIMFPSLLFPTPK-RLINNRTISIQQWLIQLTSKQMMAIHNQKGQTWSLMLMSLIMFIGSTNILGLLPHSFTPTTQLSMNLGMAIPLWSATVFTGFRYKTKTSLAHFLPQGTPALLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALLN-INTMTAFITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITITSMI-MTLFILFQLKISNYSYPA-SPESI-ELKTQKH-STP-W-EMKWTKIYLP-LL-LPPR----MFVNRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQAWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSAVELTSTNLEWLHGCPPPYHTFEEPTYINL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGEMRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSTSMLTG--------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMLLLSLGLLTNTLTMYQWWRDIIRESTFQGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGDRKHMIQALSITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIINNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFICLFIHVGRGLYYGSYMFLETWNIGVVLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAAVHLMFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGALFMMLILLILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVASILILILMPMLHTSKQRGMMFRPLSQCLFWMLVADLITLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPITSIIENNLL---KW--------MF--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADALKLFTKEPLRPATSSISMFIIAPILALSLALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLITTQEHIWMIFTSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFMAEYANIIMMNAFTAILFLGASHDPHTPELYTINFVLKTLALTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHISLPIMTASI-P-PQS--MNP-IIYTTLIMTVMSGTMLVMISSHWLLIWIGFEMNLLAMIPVLMKNFNPR-ATEAATKYFLTQATASMMLMMAIIINLLYSGQW--TITKMFNPVAMTMMTMALAMKLGLSPFHFWVPEVTQGISLQAGLLLLTWQKLAPLSVLCQISQSINPNLMLTM-AMLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNTTMTILNLLIYITMTLAMFMLLIHSSATTTLSL---SHTWNKMPVITSLMMVTLLSMGGLPPLSGFMPKWMIIQEMTKNESIIMPTLMAMTALLNLYFYMRLAYSSSLTMFPSTNNMKMKW-QFEHTKQMKLL-------PTMIVLSTLVLPMTPALSSLN---MN-IMLTLLTNVTLASLLVLIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLKTMLTMALFLLILLAASLAYEWTQKG--LEWAE-MPLVYMNIIMAFAIALAGLLMYRSHLMSSLLCLEGMMLSLFIMSTLIILNTHFTLANMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTTMLLPMTWMSKHNMIWINATVHSLLISLISL-SLLNQLGENSLNFS-LTFFSDSLSAPLLVLTTWLLPLMLMASQSHLSKETTTRKKLYITMLILLQLFLIMTFTATELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYIQNTTGSLNFLIIHYWSHPLS-NSW-----SNIFMWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTILNP-LTNYMAYPFLMLSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERVHSRTMILARGLQTLLPLMATWWLVASLTNLALPPSINLIGELFIITASFSWSNITIILMGMNMMITALYSLYMLITTQRGKYTHHINNIKPSFTRENALMALHILPLLLLTLNPKMILGPLY------MNPFASL-TLTTLTILTIPIMMS---NSNIYKT-NLYPNYVKTT-VSYAFTLSLVPLLMFMHTGQEMIISNWHWMTLQTVELSLSFKMDYFSVMFIPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFVLSMAWFLTHSNAWDLQQIFMLNNE-CPNMPLIGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMETNKLVQTMTLCLGAITTLFTALCAITQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICMHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKAMPFTTTALIIGSLALTGMPYLTGFYSKDLIIEAVNMSYTNAWALLMTLIATS-LTAAYSTRIIFFAFLGKPRFPPLVLINENNPLLINSIKRLLIGSIFAGFIISNNIPPMTVPNTTMPLYMKMTALIVTIMGFMLALELNNTTYYLK--FKYPSQTYKFSNMLGYYPSIMHRLPTYHNLSMSQKSASSLLDLIWLETILPKTTSFIQMKMSI--MVSNQKGLIKLYFLS---FLITI--MISMTLF----------NYHE---- +>Sorex_unguiculatus_Long-clawed_Shrew +----MNENLFASFATPTMMMGLPIVVLIILFPSILFPTPN-RLINNRLVSLQQWLIQLTSKQMMAIHNQKGQTWTLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLMS-ISPITAFITFIILVMLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISMI-MTLFIAFQLKISKYLYPM-SPELK-SLKALKH-NNP-W-ETKWTKIYSP-LS-LPQQ----MFVTRWLFSTNHKDIGTLYMVFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMLGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPSMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIAGFVHWFPLFTGYTLSSTWAKIQFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVVVMVFMIWEAFASKREVSSVELTTTNIEWLYGCPPPFHTFEEPVYVNS-K--------MAYPFQMGLQDATSPIMEELMNFHDHALMIVFLISTLVLYIISSMLTTKLTHTNTMDAQAVETIWTILPAIILILIALPSLRILYMMDEINNPTLTVKTVGHQWYWSYEYTDYDELNFDSYMIPTADLKPGDLRLLEVDNRAVLPMEMTVRVLITSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICGSNHSFMPIVLELVPLKVFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSMILMSIGLLTNTLTMFQWWRDVVREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTHELGGYWPPAGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQALFITIALGAYFTFLQAAEYYEAPFTISDGIYGSTFFMATGFHGFHVIIGSTFLMVCFLRQLKYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKTHPLMKIVNSSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMYLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAGVHLLFLHETGSNNPSGLCSDADKIPFHPYYTIKDILGVLLLILALTSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLAVVPFLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEHPFIIIGQLASILYFLLILVIMPITSLFENNLL---KW--------MF--------MINLLTMIVPVLLAVAFLTLIERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFIKEPLRPLTSSVSMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAVSSLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEYTWLLMSTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFLGAFHSIHLPELYSINFTTKALLLTISFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFTSSI-P-PQT--MNP-MILSIILFTIMTGTMIVLMSSHWFMIWIGFEMNMLAIIPMLMKKYSPR-SMEASTKYFMTQATASMILMLAIIMNLMYSGQW--TITNITNPTASILMTMALVMKLGLSPFHFWVPEVTQGVSLTSGMILLTWQKIAPLSVLYQIFSSINLDMLLSM-SLLSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMIYEPTIMLLNLAVYITMTISTFMLFMHSSSTTTLSL---SHTWNKTPLIATLILTIMLSLGGLPPLTGFLPKWIIIQELTKNNSIILPTTMAILSLLNLFFYMRLTYSTSLTMFPTTNSNKMKW-QFENTKQIPLM-------APLITISTLTLPLAPLLITLN---MN-MLLALSINTLLASILVLIAFWLPQLNVYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTEQLNIMITMSLALITLLAMSLAYEWIQKG--LEWTE-MSLVHMNIALAFTVALLGLLMYRSHLMSSLLCLEGMMLTLFIMGTIMILNTHFTLASMLPIILLVFAACEAAVGLSLLVMVSNTYGVDYVQNLNLLQCMLKIIMPTIMLIPLTWLSNKKTMWINTTIYGMLICLTTL-PLFNQPNNNDIYFS-STFFSDSLSAPLLALTTWLLPLMLMASQHHLMNETETRKKLYISMLILLQTFLIMTFSATELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIYIQNLSGTLNFTITQLWAHNIL-NSW-----SNDFLWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRVTVLLNP-ITDTMAYPFLLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMATWWLLASLTNLALPPTINLIGELFVMLTSFSWSNMTMILMGANVVITALYSLYMLILTQRGKYSFHINTIKPSFTRENTLMALHIIPLLLLSLNPKLILGTMY------MNLYTSA-LLTSLSMLILPVIMS---LFPIYKT-NNYPYYVKSI-ISYAFLTSLIPTLIFINMGHEEVISNWHWMTIQTIKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNVNRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFLFNSNSWELQQIFMLDTQ-QNNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLLENNKTIQTLILCMGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLSDEQDIRKMGGLFKALPFTTTSLIVGSLALTGTPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-LTAVYSTRILYYSLLGQPRYSTLILINENNPLLINSIKRLLIGSIFAGFIISYNLTPMTVPQMTMPPYLKLTALIITLTGFALAYELNLMTQNLK--LSYPHNYHKFSNMLGYFPTIIHRLFPLSTLLMSQKLSSMLLDLTWMENVLPKSVSKFQASSSI--TVSNQKGLIKLYFLS---FLITL--TISILLF----------NYHV---- +>Sus_scrofa_pig +----MNENLFASFIAPT-MMGLPIVTLIIMFPSLLFPTPK-RLINNRTISIQQWLIQLTSKQMMAIHNQKGQTWSLMLMSLIMFIGSTNILGLLPHSFTPTTQLSMNLGMAIPLWSATVFTGFRYKTKTSLAHFLPQGTPALLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALLN-INTMTAFITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITITSMI-MTLFILFQLKISNYSYPA-SPESI-ELKTQKH-STP-W-EMKWTKIYLP-LL-LPPR----MFVNRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQAWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSAVELTSTNLEWLHGCPPPYHTFEEPTYINL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGEMRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSTSMLTG--------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMLLLSLGLLTNTLTMYQWWRDIIRESTFQGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGDRKHMIQALSITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIINNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFICLFIHVGRGLYYGSYMFLETWNIGVVLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAAVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGALFMMLILLILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVASILILILMPMLHTSKQRSMMFRPLSQCLFWMLVADLITLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPITSIIENNLL---KW--------MF--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADALKLVTKEPLRPGTSSISMFIIAPILGLSLALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLITTQEHIWMIFTSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFMAEYANIIMMNAFTAILFLGASHDPHTPELYTINFVLKTLALTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHISLPIMTASI-P-PQS--MNP-IIYTTLIMTVMSGTMLVMISSHWLLIWIGFEMNLLAMIPVLMKNFNPR-ATEAATKYFLTQATASMMLMMAIIINLLYSGQW--TITKMFNPVAMTMMTMALAMKLGLSPFHFWVPEVTQGISLQAGLLLLTWQKLAPLSVLCQISQSINPNLMLTM-AMLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNTTMTILNLLIYITMTLAMFMLLIHSSATTTLSL---SHTWNKMPVITSLMMVTLLSMGGLPPLSGFMPKWMIIQEMTKNESIIMPTLMAMTALLNLYFYMRLAYSSSLTMFPSTNNMKMKW-QFEHTKQMKLL-------PTMIVLSTLVLPMTPALSSLN---MN-IMLTLLTNVTLASLLVLIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLKTMLTMALFLLILLAASLAYEWTQKG--LEWAE-MPLVYMNIIMAFAIALAGLLMYRSHLMSSLLCLEGMMLSLFIMSTLIILNTHFTLANMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTTMLLPMTWMSKHNMIWINATVHSLLISLISL-SLLNQLGENSLNFS-LTFFSDSLSAPLLVLTTWLLPLMLMASQSHLSKETTTRKKLYITMLILLQLFLIMTFTATELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYIQNTTGSLNFLIIHYWSHPLS-NSW-----SNIFMWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTILNP-LTNYMAYPFLMLSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERVHSRTMILARGLQTLLPLMATWWLMASLTNLALPPSINLIGELFIITASFSWSNITIILMGMNMMITALYSLYMLITTQRGKYTHHINNIKASFTRENALMALHILPLLLLTLNPKMILGPLY------MNPFASL-TLTTLIILTIPIMMS---NSNIYKT-NLYPNYVKTT-VSYAFTLSLVPLLMFMHTGQEMIISNWHWMTLQTVELSLSFKMDYFSVMFIPVALFVTWSIMEFSMWYMHSDPFINRFFKYLVLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFVLSMAWFLTHSNAWDLQQIFMLNNE-CPNMPLIGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMETNKLVQTMTLCLGAITTLFTALCAITQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICMHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKAMPFTTTALIIGSLALTGMPYLTGFYSKDLIIEAVNMSYTNAWALLMTLIATS-LTAAYSTRIIFFAFLGKPRFPPLVLINENNPLLINSIKRLLIGSIFAGFIISNNIPPMTVPNTTMPLYMKMTALIVTIMGFMLALELNNTTYYLK--FKYPSQTYKFSNMLGYYPSIMHRLPTYHNLSMSQKSASSLLDLIWLETILPKTTSFIQMKMSI--MVSNQKGLIKLYFLS---FLITI--MISMTLF----------NYHE---- +>Oryctolagus_cuniculus_rabbit +----MNENLFSSFATPT-LMGLPIVALIIMFPTLLFPSPS-RLINNRLVSTQQWLAQLILKQMMLMHSPKGRTWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPIPLIPMLIVIETISLFIQPMALAVRLTANITAGHLLMHLIGGAALALVS-ISPTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTIVAMI-LSLFILMQLKFHKYTYPM-NPVLK-ALESTSF-PCP-W-ETKWTKIYSP-LS-LPQH----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKAPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDPTWAKIHFTVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMVMIFMIWEAFASKREVETIELTTTNLEWLHGCPPPYHTFEEPAFVKA----------MAYPFQLGFQDASSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLNPGDLRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLISTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSLSMI----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSPSLLLIGLVTNTLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMQQALAITILLGIYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCLLRQFNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNHSLIDLPAPSNISAWWNFGSLLGLCLMIQIFTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLYMHVGRGIYYGSYTYLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIATLVLIHLLFLHETGSNNPTGIPSNSDKIPFHPYYTIKDTLGFLVAILLLLILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLAFIPFLHMSKQRSMMFRPISQVLFWVLVADLLTLTWIGGQPVEHPFITIGQVASVLYFTTILILMPLASLIENKIL---KW--------MF--------LINTLLLILPVLLAMAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLRPLTSSPLLFIIAPTLALTLALSMWLPIPMPYPLVNLNMGILFILATSSLAVYSILWSGWASNSKYALFGALRAVAQTISYEVTLAIILLCILLMNGSFTLSSLITTQEYMWILLPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNIILMNALTAILFLGSFHSHTNPEMFTVNFATKTLLLTMTFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHISMPIMLSSI-P-PQM--MNP-LTLIIIMFTLFMGTMITVFSSHWLTMWIGLEMNMLAIIPILINKATPR-STEAATKYFLTQATASMILMMAITLNILDSGQW--TLINPQNQLTPVLITLALIIKLGMAPFHFWVPEVTQGVPLKSGLILLTWQKLAPLSILYQISPSINPTMMMSV-AILSIMVGGWGGLNQTQLRKILAYSSIAHMGWMAAIITFNPNTMVLNLIIYILMTIPMFMMFMQHSSTTTLSL---SQMWNKNPLMVSTILITLMSLGGLPPLTGFIPKWIIIQELTKNGNIILPTAMAMLALLNLYFYMRLIYSSSLTMFPTTNNLKMKW-QFESTKRMPLI-------TPLIILSTMLLPLTPALSVLN---MN-LMLVLLINTTISLVLVTIAFWLPQLNIYSEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAAQFNNLNLVLIMALMLISILALGLAYEWIQKG--LEWVE-MPSIYINIFLAFILALLGMLVYRSHLMSSLLCLEGMMLSLFVLITLTALNTHFTLSFMFPIILLVFAACEAAVGLALLVMVSNTYGMDYVQNLNLLQCMLKTIIPTIMLIPTVWWSKPHMIWINATVYSLLISLTTL-SLLNQPSDTNLNFS-TTFFSDALSTPLLMLTTWLLPLMILASQHHLDKETLTRKKIYISLLISLQVFLVMTFSATEFILFYILFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLLVALIYLQNSMGSLNFLLLQLMNKSIT-TSW-----SNSLMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITILLSP-ITDYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTILPLMAAWWLVASLTNLALPPTINLLGELLIIMASFSWSNLTIILMGTNVLITALYSLYMLSTTQRGKFTYHTNNISPTFTRENTLMVLHLAPLLLLSISPKIILGLMF------MNLFSTS-VAVSIIILVLPIVAS---FTNIFNS-PNYPHYVKTS-VSYAFTISLIPTLIFIATSQEMMVSNWHWMTIHTLKLTTSFKLDYFSMLFTPIALFVTWSIMEFSMWYMHSDPKINQFFKYLLMFLITMLILVTANNMFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFIMALAWFAINLNTWELQQIFILDNN-ITILPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLLENNKTAQTLILCLGAITTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKTMPFTASALTIGSLALTGMPFLTGFYSKDLIIESANTSNTNAWALIITLIATS-LTAVYSTRIIFFALLGQPRYPALIVINENNPLLINSIKRLALGSIFAGFLISNLITPNNVPQMTMPLYMKMTALFVTIMGFTIAMELNQLSLSLK--MTTQSPYFNFSNMLGFFPMTIHRILPYLNLSASQNMATLLLDMTWTEKAIPKNISDIQIFAST--SVSSQKGLIKLYFLS---FLISL--LLVLFILT----------------- +>Glis_glis_Fat_dormouse +----MNEELFASFITPT-LTGLPVVILIILFQGILFPSSN-RLINNRLISFQLCLHNWFLKQMMTMHNNKGRTWSLMLVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPLWAGAVITGFRHKLNQSLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTS-ISPPTAMITFIILILLTILEFAVALIQDYMFNILVSIYLHDNTMPQLDTSTWFTTILSTS-FSIIHRLQLKLTTHIFSP-NPTPK-DLKTLKH-HNP-W-DKKWTKSYLP-LS-LHQH----MFINRWFFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSLWLLPPSFLLLSASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTFFSLHLAGSASILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLIILSLPVLAAGITMLLTDRNLNTTFLYPAGGGDPILYQHLFWFFGHPEVYILLFTWFGIISHRTTYYSGKKEPFGYMGMVGAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIVWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVLAQFHYVLFTGAVFANMVGFAHWFPLFLGYTSNDAWAKIHFAVMFVGMNLTFFPQDFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMIMMFMVWEAFASKREVLTVELPSTNLEWLHGCPPPYHTFEEPTYVKH----------MAYPFELGFQDATSPIMEELLHFHDHALMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEGETIWTILSAIILIMIALPSLRILYMMDELNNPTLTVKTVGHQWYWSYQYTGYEDLSFDSYMVPTTDLKPGELRLLEVDNRVVLPMEMPVRVLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFENWSLSMI----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSSTLLILGLTANSLTMYQWWRDIIREGTFQGHHTMIIQKGLRYGMILFIVSEIFFFAGFFWAFYHSSLAPTPELGGCWPPTGITLFNPLEVPLLNTTVLLASCVSITWAHNSLMEGNRNHMTQALLMTILLGFYFTILQASEYLETSFTISDGVYGSTFFMATGFHGLHVIIGSTSLTVCLMRQLNFHFTSNHHFGFEAAAWYWQFVDVVWLFLYVSIYWWGS--MTIIRKSHPLIKIINHSFIDLPTPSNISAWWIFGSLLGACLGIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGMYYGSYMFIETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMVHLLFLHETGSNNPSGLNSDTDKIPFHPYYTIKDILGLLLLIFLLMTLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILAILPVLQFSKQRSMMFRPLSQCPFWILTADLFTLTWIGGQPVEHPFIIIGQLASILYFSIILFFLPTFSLLENKLL---KW--------MF--------IVNLFSLIIPILLAMAFLTLIDGKVLGYMQLRKGPNIVGPYGLLQPIADAMKLFIKEPLRPLSSSMSLFTIAPTLALTLAFSMWIPLPMPQPLINMNMGMVFILATSSLAVHSVLWSGWASNSKYSLIGALRAVAQTVSYEVTLAIILLSTLMYNGSFTLSTLTQTQERVWVILPTWPLAMVWVISTLAETNRARSDLTKGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNTLTSTLFLSALNNIYFPETFTLNFMMKTLILTSMFLWIRASYPRFRYDHLLHLLWKNFLPLTLALCMWHVTLPIMLSNI-P-PQT--MNP-LTATAIFSTLFMGTFIVLLSSHWLLTWVGLEMSMLSIIPIIINKANPR-STEAATKWFRIQATASMILMMAIISNIMLSGQW--TEFSFTSNFPSILATIALTMKLGLSSFHFWVPEVIQGILLLPGMIILTWQKLAPLLILYQISSSTNPLIILTM-AITSIALGGWGGLNQTQLRKVMAYSSIAHMGWMLAIITFNPSAMVLNLIIYILMTITMFSSFYLNNNTTTFSL---STLWNNTPIMISATLITLMSLGGLPPLSGFLPKWIIIQEVIKNHVTMLALSMAMMALLNLYFYTRLIYSTSLTLFPSSNNMKMKW-KFENTKLMILN-------SFIIFLSISLLPLTPLGINS----MN-MMLTIFINLTLSSILITIAFWLPQLNIYTEKISPYECGFDPLGSARLPFSMKFFLVAITFLLCSLEMALLLPLPWASQINNLLLMLMVALVLISILALGLAYEWIQKG--LEWVE-MPLIFFNVFSAYLLSLLGILIYRSHLMSSLLCLEGMMLSMFIINSAIILNMLFSLSFIMPITLLVFAACEAAIGLAFLVMVSSSYGLDYVQNLNVLQCMLKIIIPTMLLIPITWFSKSSLIWTKITTHSLLISLASL-FLLNQLDSSSLNFS-PLFFTDSLSSPLLILTTWLFPLMMLASQNHLTKETTTRKKLFITILISLQTFLIMTFSATELILGYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLIVLIYIQISSGSLNFLIMSFTSPQLI-FPW-----SNNLMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITVILDP-MTETMTYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMGLVIIAILSQTAWSFMGATGLMIAHGLTSSLLFCLANSNYERTHSRTLLLARGLQMILPLMGTWWILANLTNLALPPTINLIGELLIILSTFSWSNFTIILTGLNMLITALYSIYMLIMTQRGKLSYHIKNISPSFTRENTLMLMHLLPLLLLSLNPKFILGNLL------MNLFSSF-TLMTFSILLYPILLS---FTDQYNN-NLFPNHVKTS-IICAFLFSLIPTLMFINSGYDMIISNWHWMTIQTLNLTMSFKMDMFSMMFVPVALFVTWSIMEFSLWYMHSDPYINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRPDANTAALQAVLYNRIGDIGFVLSMAWFLMHSSSWEFQQRFSSQNS-SNILPLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPFIKNNQLVQSIIMCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFFHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSSELTVGSLTLTGTPYLTGFYSKDLIIESANTSYTNAWALSITLIATS-LTAIYSTRIIFLLIRSKPRFVPLSPINENNPLLNNAIKRLLIGSIFAGFLITNNMTPMSIQQMTMPWYLKLTALIVTILGFMMAMELNNLSLYFK--YKTTSQHVKFSNLLGFFPSTMHRLFPNTNLLISHNSASTLLDLIWLEKSTPKLLSSTQLMDST--LSSNQTGLIKLYFLS---FLLSM--LMVTMLII----------------- +>Pecari_tajacu_collared_peccary +----MNENLFASFITPT-MMGLPIITLIIMLPNMLFPAPK-RLINNRMISIQQWIIQLVTKQMMAIHNQKGQTWSLMLVSLILFIGSTNILGLLPHSFTPTTQLSMNLGMAIPLWAATVLTGLRHKTKSSLAHLLPQGTPTPLIPMLIIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALLN-INTTTAMITLVILVSLTILEFAVALIQAYVFTLLVSLYLHNNTMPQLDTSTWPITIMSMV-LVLFIMFQLKTSSYTYPM-SPELT-NPKPKEQ-KAP-W-EMKWTKIYSP-LS-SPLQ----MFLERWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAVSQYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNVISSMGSFISLTAVMLMVFMIWEAFASKREVSSVELTSTNLEWLHGCPPPYHTFEEPTYINS-K--------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMSAQEIETIWTILPAIILILIALPSLRILYMMDEMNDPSLTVKTMGHQWYWSYEYTDYEDLAFDSYMIPTSDLKPGEMRLLEVDNRVVLPMEMTIRILVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLETFEKWSTSMLMSSL------MTHQAHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSILLLSLGLLTNTLTMYQWWRDIVRESTFQGHHTSAVQKGLRYGMILFIISEVLFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPMEVPLLNTSILLASGVSITWAHHSLMEGDRKHMLQALFITIALGMYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLAVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIINNTFIDLPTPSNISSWWNFGSLLGICLLLQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFIHVGRGLYYGSYLFLETWNIGVILLLTVMATAFMGYVLPWGQMSFWAATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHETGSNNPTGIPSNMDKIPFHPYYTIKDILGATLMILILLLLVLFSPDLLGDPDNYTPANPLNTPSHIKPEWYFLFAYAILRSIPNKLGGVLALALSILILALVPALHTSKQRSMMFRPLSQLLFWMLVADFLTLTWIGSQPVEHPFIIIGQLASILYFLIILVLMPVANIIENNLL---KW--------MF--------LINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADALKLFTKEPLRPATSSTSMFIIAPILALTLALTMWIPLPMPYPLINMNLGVLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQERIWMIFTSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFMAEYANIIMMNAFTAILFLGAFHDMHTSELYTINFVLKTLALTMMFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMSLPIMTASI-P-PQT--MNP-MISIILTMTIMSGTVIVMISSHWLFIWTGFEMNLLAITPMLMKNFNPR-AMEAATKYFLTQATASALLMMAVIINLLYSGQW--TVIKIFNPTASMVMTMALAMKLGLSPFHFWVPGVTQGISLQAGLLLLTWQKLAPMTVLCQISPSINPDMMLTM-AMLSILVGGWGGLNQTQLRKIMAYSSITHMGWMTAILPYNTTMTILNLLIYITMTLTMFMLFIHSSTTTMLSL---SHTWNKTPVITSLMLTILLSMGGLPPLSGFIPKWMIIQELTKNDSIIMPTLMAMATLLNLCFYTRLAYSSSLTMFPSINNMKMKW-QFEHTKQMKLL-------PPLIVLSTLILPLTPAVLTLH---MN-LVLTLLTNTAVASLLMLIAFWLPQLNTYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWVSQSNNLKISLTMALLLIMLLAISLAYEWSQKG--LEWTE-MTLVYMNIIMAFTVALAGLLMYRSHLMSSLLCLEGMMLALFVMSTLIILNTHFTLANMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIFPTIMLLPLTWWSKHNMIWINVTSYSLLISLISL-TTLNQPNDNSTNYS-LTFFSDSLSAPLLILTTWLLPLMLMASQFHLSKEPSARKKLYITMLVLLQLLLVMTFTATELILFYILFESTLVPTLIIITRWGNQAERLNAGLYFLFYTLAGSLPLLVALIYTQNTMGSLNFLILQYWANTLT-DTW-----SNTLMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNP-LTNSMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANTNYERVHSRTMILARGLQTLLPLMAMWWLMAGLTNLALPPSINLIGELFVIMSSFMWSNMTIILMGLNMLITTLYTLYMLITTQRGKYTHHINNIKPSFTRENTLMALHILPLLLLTLNPKTILGPLY------MNPSTSL-TLITLFMLTMPIMMS---GSNIYKT-KSYPQYVKTT-VSYAFIISLVPMLMFIYTGQETTISNWHWITIQTVKLSLSFKMDYFSTMFMPVALFVTWSIMEFSMWYMHSDPHINRFFKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAMLYNRIGDMGFMLSMAWFLSHSNSWDFQQIFMLNYN-CPNTPLLGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNKLIQTTTLCLGATTTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNNEQDIRKMGGLYNTMPFTTTALITGSLALTGMPYLTGFYSKDLIIETANTSYTNAWALLITLIATS-LTAMYSARIIFFALLGQPRFSTLTLINENNPSLINPIKRLLAGSIVAGFLITNNIPPMTVPHMTMPHHLKLTALTITMAGFILALDINNTTYYLK--FKYPSQSFKFSNMLGYYPSVMHRLPPYLNLSMSQKSASSLLDLIWLEVILPKTTSTIQMKMSI--LVSTQKGLIKLYFLS---FFITI--IIMMLLF----------NSHE---- +>Lepus_europaeus_European_hare +----MNENLFSSFITPT-MMGLPIVILIIMFPTLLFPIPT-RLINNRLVSAQQWLAQLILKQMMMMHSPKGRTWALMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGAALALIS-ISPTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLVTIIAMI-LTLFILIQLKFHKYSYPL-SPAPK-TFKSTSF-PTP-W-ETKWTKIYSP-LL-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDQTWAKIHFTVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMVMIFMIWEAFASKREVETVELTTTNLEWLHGCPPPYHTFEEPAYVKA----------MAYPFQLGFQDASSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLNPGDLRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLISTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFESWSLSMI----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSPSLLLIGLLTNTLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIKPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMQQALAITILLGIYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCLLRQLHFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNHSLIDLPAPSNISAWWNFGSLLGLCLMIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWLIRYLHANGASMFFICLYMHVGRGIYYGSYTYLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMIHLLFLHETGSNNPSGIPSNSDKIPFHPYYTIKDALGFLMLILLLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIIPFLHMSKQRSMMFRPISQVLFWILVADLLTLTWIGGQPVEHPFITIGQVASILYFSIILILMPLASLVENKIL---KW--------MF--------LINTFLLILPVLLAMAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPLTSSSLLFIIAPTLALTLALSMWLPIPMPYPLVNLNMGVLFILATSSLAVYSILWSGWASNSKYALFGALRAVAQTISYEVTLAIILLCVLLMNGSFTLSSLITTQEYMWILFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNIIMMNALTTILFLGSFHSHTNPEMFTISFAAKTLLLTMTFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHISMPIMLSSI-P-PHM--MNP-LIFSIILFTLFLGTMITMFSSHWLTMWIGLEMNMLAIIPILINKATPR-STEAATKYFLTQATASMILMMAITLNILDSGQW--TLINPQNHFTPIMIMLALIIKLGMAPFHFWVPEVTQGVPLKSGLILLTWQKLAPLSILYQISSSIDSTMMMLV-AILSIMVGGWGGLNQTQLRKILAYSSIAHMGWMAAIITFNPNTMVLNLIIYILLTIPMFMMFIQHTSTTTLSL---SQMWNKTPLMVTAILITLMSLGGLPPLTGFIPKWIIIQELTKNGNIIMPTMMAMLALLNLFFYLRLIYSSSLTMFPTTNNLKMKW-QFESMKRMTFM-------APLIILSTMFLPLTPMLSVLN---MN-LILVLLINMTISLILVTIAFWLPQLNIYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAAQFNNLNLVLIMALMLISILALGLAYEWIQKG--LEWVE-MPSIYVNIFLAFIFALLGMLIYRSHLMSSLLCLEGMMLSLFILITLTALNMHFTLSFMFPIVLLVFAACEAAIGLALLVMVSNTYGMDYVQNLNLLQCMLKTIIPTIMLIPTVWWSKSRMIWINATVYSLLISLTTF-LLLNQPNDTNLNLS-TTFFSDALSTPLLMLTVWLLPLMILASQHHLSKESLLRKKTYISLLISLQIFLVMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLLVALIHLQNSMGSLNFLLIQLSNESLL-TSW-----SNSLMWLACMMAFLVKMPLYGLLLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVTILLNP-ITEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERVHSRTMLLARGLQTVLPLMAAWWLLASLTNLALPPTINLLGELLIVMASFSWSNLTIILMGTNVLITALYSLYMLSTTQRGKFTYHTNNISPTFTRENTLMMLHLAPLLLLSINPKIILGPM-------MNLFSTS-MAVSIIILVLPIMAS---FTNIFNH-NNYPYYVKTS-VSYAFMISLIPSLIFIISNQETMISNWHWMTIHTLKLTTSFKLDYFSMLFTPIALFVTWSIMEFSMWYMHSDPKINQFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFIMAMAWFAINLNTWEFQQMFMSDNN-ITILPLIGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLLENNKTAQTLILCLGAITTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKTLPFTSSALTIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALIITLIATS-LTAVYSTRIIFFALLGQPRYPTLIIINENNPSLINSIKRLALGSIFAGFLISNLISPNNVPQMTMPLYMKMTALFVTILGFSIAMELNQLSLHLK--MSTQSNSFNFSNMLGFYPATMHRLLPYINLSASQNVATLLLDMTWTEKAIPKNISDIQILAST--SVSSQKGLIKFYSLS---FLISM--LLALFILV----------------- +>Lepus_capensis_brown_hare +----MNENLFSSFITPT-MMGLPIVILIIMFPTLLFPAPT-RLINNRLVSAQQWLAQLILKQMMMMHSPKGRTWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGAALALIS-ISPTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLVTIIAMI-LTLFALIQLKFHKYSYPL-SPTPK-TLKPTSF-PSP-W-ETKWTKIYSP-LL-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDQTWAKIHFTVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMVMIFMIWEAFASKREVETVELTTTNLEWLHGCPPPYHTFEEPAYVKA----------MAYPFQLGFQDASSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLSPGDLRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLISTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSLSMI----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSPLLLLIGLLTNTLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIKPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMQQALAITILLGIYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCLLRQLHFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNHSLIDLPAPSNISAWWNFGSLLGLCLMIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWLIRYLHANGASMFFICLYMHVGRGIYYGSYTYLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMIHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDLLGFLMLILLLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIIPLLHMSKQRSMMFRPISQVLFWILVADLLTLTWIGGQPVEHPFITIGQVASILYFSIILILMPLASLIENKIL---KW--------MF--------LINTFLLILPVLLAMAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLRPLTSSSLLFIIAPTLALTLALSMWLPIPMPYPLINLNMGVLFILATSSLAVYSILWSGWASNSKYALFGALRAVAQTISYEVTLAIILLCILLMNGSFTLSSLITTQEYMWILLPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNIIMMNALTAVLFLGSFHSHTNPEMFTINFAAKTLLLTMTFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWYISMPIMLSSI-P-PHM--MNP-LIFSIILFTLFLGTMITMFSSHWLTMWIGLEMNMLAIIPILINKATPR-STEAATKYFLTQATASMILMMAITLNILDSGQW--TLINPQNNFTPIMIMLALIIKLGMAPFHFWVPEVTQGVPLKSGLILLTWQKLAPLSILYQISPSIDSTMMMLV-AILSIMVGGWGGLNQTQLRKILAYSSIAHMGWMAAIITFNPNTMILNLIIYILLTIPMFMMFIQHTNTTTLSL---SQMWNKTPLMVTAILITLMSLGGLPPLTGFIPKWIIIQELTKNGNIIMPTMMAMLALLNLYFYLRLIYSSSLTMFPTTNNLKMKW-QFEPMKRMTFM-------APLIILSTMFLPLTPMLSVLN---MN-LILVLLINMSISLILVTIAFWLPQLNIYSEKTTPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAAQFNNLNLVLIMALMLISILALGLAYEWIQKG--LEWVE-MPSIYVNIFLAFIFALLGMLVYRSHLMSSLLCLEGMMLSLFILITLTALNMHYTLSFMFPIVLLVFAACEAAIGLALLVMVSNTYGMDYVQNLNLLQCMLKTIIPTIMLIPTVWWSKNHMIWINATIYSLLISLTTF-LLLNQPNDTNLNLS-TTFFSDALSTPLLMLTVWLLPLMILASQHHLSKESLLRKKMYISLLISLQIFLVMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLLVALIHLQNSMGSLNFLLIQLSNESLT-TSW-----SNSLMWLACMMAFLVKMPLYGLHLWLPKAHVEGPIAGSMVLAAILLKLGGYGMMRITILLNP-ITEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQSPWSFMGATALMIAHGLTSSLLFCLANSNYERVHSRTMLLARGLQTILPLMAAWWLLASLTNLALPPTINLLGELLIVMASFSWSNLTIILMGTNVLITALYSLYMLSTTQRGKFTYHTNNISPTFTRENTLMMLHLAPLLLLSINPKIILGPML------MNLFSTS-MAVSIIILVLPIIAS---FTSIFNH-SNYPYYVKTS-VSYAFMISLIPTLIFIISNQETMVSNWHWMTIHTLKLMTSFKLDYFSMLFTPIALFVTWSIMEFSMWYMHSDPKINQFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFIMAMAWFAINLNTWEFQQMFMSDNN-ITILPLIGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLLENNKIAQTLILCLGAITTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKTLPFTSSALTIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALIITLIATS-LTAVYSTRIIFFALLGQPRYPTLIIINENNPSLINSIKRLALGSIFAGFLITNLVTPNNIPQMTMPLYMKLTALFVTILGFSIAMELNQLSLHLK--MSTQSNSFNFSNMLGFFPATMHRLLPYINLSASQNVATLLLDMTWTEKAIPKNISDIQILAST--SVSSQKGLIKFYSLS---FLISM--LLALFILA----------------- +>Murina_leucogaster_Greater_tube-nosed_bat +----MNENLFASFITPT-MMGLPIVMLIIMFPSMLFPSAT-RLINNRLVSIQQWLVRLATKQMMAIHSKKGQTWALMLMSLMMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVILGFRHKTKLSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGSAALALMD-INMATAFITFLILVLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSITILSAI-ITLFIMFQLKISKYYYYP-KPEPA-ATMLQKH-TTP-W-ETKWTKIYLP-LL-LPLQ----MFINRWFFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFIHWFPLFTGYTMNSSWAKVHFLTMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNVVSSMGSFISLIAIMLMVFMIWEAFASKREVLMVELPTTNLEWLHGCPPPYHTFEEPTYINP-K--------MAYPFQLGLQDATSPIMEELTSFHDHALMIVFLISSLVLYVISLMLTTNLTHTSTMDAQVVETIWTILPALILIMIALPSLRILYMMDEINNPSMTIKTIGHQWYWSYEYTDYENLVFDSYMIPTLELGPGQFRLLEVDNRVVLPAELTIRMLITSEDVLHSWAIPSLGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICGSNHSFMPIVLEMVPLKHFEKWSSSMT----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLVMWFHFNSTPLLLLGLAANSLTMYQWWRDIIREGTFQGHHTPAVQKGLRYGMILFIASEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLNPMEVPLLNTSVLLASGVTITWAHHSLMDANRKHMMQALFITIALGLYFTVLQASEYYETPFTISDGICGSTFFMATGFHGLHVIIGSTFLIVCFFRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIINNSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTMTAFNSVTHICRDVNYGWVLRYLHANGASMFFICLYLHIGRGLYYGSYMYKETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLVMMTALLALVLFSPDALGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLVIIPFLHTSKQRSMAFRPLSQCLFWLLAADLLTLTWIGGQPVEHPYIIIGQLASILYFSIIIILMPLAGLVENHLM---KW--------MY--------FTNLLATIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSPMLFIIAPTMALTLALTMWTPLPHTLSPLTKPKHVIYPSPIESSRVYHYV-IGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSFTLSTLITTQEYIWLLVPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTVILFMGAYHNMMIPELHTLDFTIKTLLLTALFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVTLPIILASI-P-PQT--MNP-LTMSLVLMTMILGTLLVMTNSHWFLIWVGFEMNMLAIIPLLTKEHNSR-STEAATKYFLTQTTASMLLMAAVVINLLHTGHW--TVTKPMNSTASTMMTMALTMKLGMSPFHFWVPEVTQGIPLMSGLILLTWQKLAPLSILYIILPHTNMELLVIM-ALMSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMTSILIYNPSMTLLNLYLYIPMTITMFMLMMTNLTTTMSSM---SLAVNKTPLVTIFILVTLMSLGGLPPLTGFMPKWLIVQEMMKNNNILMPAIMTTLALLNLYFYTRIMYTTSLTMFPTTNNMKIKW-QYKITKKMKCL-------PPMIIISTMILPLMPTTMALE---MN-LMWTLAINTTLALALVTIAFWLPQMSVYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLMGMLFTSLFLISLLIVSLAYEWLQKG--LEWSE-MSLTNVNILLAFTTSLLGLLLYRSHLMSSLLCLEGMMLSLFVLITVTILTTHSTMANMMPIIMLVFAACEAALGLSLLVAVSNTYGTDYVQNLNLLQCMLKIITPTIMLIPLVWMSKGNMVWINPTMYSLMINMTCL-PLMNQPNDNSLNLS-TLFFSDPLSTPLLMLTTWLLPLMIIASQSPMKKEPLARKKLYLTMMILLQIFLIMTFSATELMMFYILFEATLLPTLIMITRWGGQTERLNAGIYFLFYTLVGSLPLLIALIYTQHTTGSLNLLLLKYWVEPSA-HTW-----GNSALWLAYMMALMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITMILNP-MVNFMAYPFLMLSLWGMIMTSSCSVCLRQTDLKSLIAYSSVSHMALVIMATLIQSPWGFMGATTLMIAHGLTSSLLFCLANSNYERTHSRTMTLARGLQTILPLMATWWLLASTMNLALPPSINLIGELMVTTAMFSWSNFSIIFLGINITITALYTLYMLITTQRGKYTYHTMSIKPSFTRENTLMLLHLLPLLLLMLSPKIIMGDMY------MTMASTL-LLLSLMILTIPLVYT---PNKLTSN--TYPEYIKTM-ISYSFMMNLPATMMFIQHGQEMMISNWHWLTIQTVNLTLSFKLDYFSIMFMPVALFITWSIMEFSMWYMHSDPEINRFFKYLLTFLITMLILITANNIFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDVGFILSMAWFLTNSNSWELQQIFMLSQK-NTNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLIENNQLMQSLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLFKPMPFTTTALITGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALMITLIATS-LTAIYSTRIIFFVLIGKPRFPSLILINENNPLLINPITRLLIGSIFAGFLISNNITPTTVPQMTMPPHLKLTALLVTLVGFATALELNHMTHNLK--HKNPSSMFKFSIMLGYFPLTMHRLSPLINLIISQKLATMLLDLIWLENALPKLTSNIQQNTSI--MITNQKGLIKLYFSS---FFITI--VVALIMF----------KFHE---- +>Myotis_macrodactylus_ +----MNENLFASFITPT-MMGLPIVMLIIMFPSMLFPSTA-RLVNNRLVSIQQWLIRMTAKQMMAIHSKKGQTWTLMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISMTTAFITFIILVLLTVLEFAVALIQAYVFTLLVSLYLHDNAMPQLDTSTWFITIISMI-ITLFIMFQLKISKHYYYN-NPEPL-TTKLEKH-SNP-W-ETKWTKIYLP-LL-LPQR----MFINRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTISTTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVILMIFMVWEAFASKREVLVVELPSTNLEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLSFHDHALMIVFLISSLVLYIISSMLTTNLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTIKTLGHQWYWSYEYTDYEDLMFDSYMVPTSELSPGQLRLLEVDNRVVLPAELTIRMLITSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICGSNHSFMPIVLEMIPLKHFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNTSVLLLMGLTTNMLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFILSEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRMHMMQALLITILLGLYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIINSSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFNSVTHICRDVNYGWILRYLHANGASMFFICLYLHVGRGLYYGSYMYTETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGMLLMITALLTLVLFSPDMLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIIIPLLHTSKQRSMTFRPLSQCLFWLLAADLLTLTWIGGQPVEHPYVIIGQLASILYFSIIIILMPLTSLVENYLL---KW--------MY--------FINLLMMIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPMQPLTSSLTLFIIAPTLALTLALTMWIPLPMPYPLINMNLSMLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSILLMNGSFTLTTLITTQEYIWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTIILFLGAYNNPMFSELYTTNLTTKTLLLTMMFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVTLPIILASI-P-PLT--MNP-MILSLVLTTMISGTLIVMTSSHWFMTWVGFEMNMLAIIPLLTKEHNPR-STEAATKYFLTQTTASMLLMMAAITNLLHTGHW--SIMKLINPTASVMMTMALAMKLGLSPFHFWVPEVTQGIPLMSGLMLLTWQKLAPLSVLYMITPLINMNLLLAM-SLMSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMLAILTYNPTMTLLNLYLYIPMTITMFMLLMLSSATTTTSL---SHTWNKLPLITMLILTTMLSLGGLPPLTGFLPKWAIIQEMTKNNSIIMPTLMTLLALLNLYFYTRITYTTSLTMFPTSNNMKMKW-QFKTPKQMMYL-------PLMITISTLTLPLAPIMMILE---MN-FMLTLTINTLLASLLVTIAFWLPQMNVYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDKLMTMLFMSLFLISLLIISLAYEWLQKG--LEWSE-MSLIHMNILLAFITSLLGLLMYRSHLMSSLLCLEGMMLSLFVLTTMTILITHATLASMMPIILLVFAACEAALGLSLLVVVSNTYGTDYVQNLNLLQCMLKIIIPTTMLIPLTWLSKSNMMWINSTIHSLMISMACL-PLMNQFCDNSLNLS-MLFFSDSLSTPLLMLTTWLLPLMIIASQYHMTKESLTRKKLYITMMILLQIFLIMTFSATELIMFYILFEATLVPTLIIITRWGGQTERLNAGIYFLFYTLAGSLPLLVALIFTQATLGSLNLLLAQYLAEPPT-HIW-----GSSLLWLAFMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMMLSP-TTNFMMYPFMMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIMAILIQSPWSFMGATALMIAHGLTSSLLFCLANSNYERTHSRTMILARGLQMILPLMAAWWLLASLTNLALPPSINLIGELFVTVSMFSWSNFSIILLGINIIITALYTLYMLIMTQRGKYTYHIYNIKPSYTRENTLMSLHLMPLLLLMINPKIILGTMY------MNLFSTL-MLLSLIILVLPLTLN---FNKMPNY-YSYPEYVKTM-IFYSFMASMPPTIMFIQSNQEMMISNWHWMTIQTMKLSLSFKLDFFSMVFVPVALFITWSIMEFSMWYMHLDPNINRFFKYLLMFLITMLILVTANNIFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRVGDVGFILSMAWFMANSNSWELQQIFMLNLD-NTTLPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLIENNKMIQSLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-LTAVYSTRIIFFALLGKPRFPSLVLINENNPLLMNPITRLLVGSIFAGFVISNNINPSTVPQMTMPLHLKLTALLVTLMGFAMAMELNYMTQNLK--YKHPSTMFKFSTMLGYFPLTMHRLNPLTSLIMSQKSATMLLDLIWLENALPKLITKIQQKSSV--MVSNQKGLIKLYFLS---FLITM--SMALIML----------NFHA---- +>Choloepus_didactylus_southern_two-toed_sloth +----MNENLFASFVVPT-MMGLPIVILIVMFPTLLFPSPG-RLITNRLISIQQQMTNLILKQMMIIHSPKGRTWSLMLISLITFIGSTNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVIMGLRHKTKTSLAHFLPQGTPIPLIPMLVIIETMSLFIQPTALAVRLTANITAGHLIMHLIGNATLALMS-ISPTTAFITFIILIALTALEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSITILSTF-ISLFTLMQLKLTKHNFIT-PPTPK-TPNTTKH-TTP-W-EMKWTKTYSP-LS---------MLVTRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLTSSMVEAGAGTGWTVYPPLAGNLAHAGPSVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNMKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYMLNTTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFMIWEAFASKREVLFVEFTTTNIEWLHGCPPPYHTFEEPAFVKI----------MAHPMQLGFQDATSPIMEELLHFHDHTLMIMFLISTLVLYTISLMLSTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEMNNPLLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVILPMEMSIRMLISSEDVLHSWTIPSLGLKTDAIPGRLNQATLTSSRPGLYYGQCSEICGSNHSFMPIVLELTPLKHFENWSSSTL----------MAHQMHAYHMINPSPWPLTGALSALLLTSGLVMWFHFNSTTLLIIGLTTSLLTMYQWWRDVVRESTFQGHHTVVVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGISPLDPLEVPLLNTSILLASGVSITWAHHSLMEGNRKHMLQALFITIALGVYFTLLQASEYFNAPFTISDGIYGSTFFMATGFHGLHVIIGSSFLIICFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLLLYVSIYWWGS--MTNIRKTHPLFKIINHTFIDLPTPSNISTWWNFGSLLGMCLIMQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYLHTNGASMFFICLYLHIGRSMYYGSYTYLKTWNIGIMLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFTLHFILPFIITALTMTHLLFLHETGSNNPLGISPDSDKIPFHPYYTMKDILGLLPMIFIMMALALFYPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVMALVLSILILAILPMLHTAKQRSLMFRPISQCLFWMLMTNLLVLTWIGGQPVEHPFTIIGQLASISYFSIILILMPMAGLIENNLM---KW--------ML--------TTNILCLIIPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPAADATKLFTKEPLHPLTSSKFMFTIAPTLALTLALTLWIPLPMPYPLIDLNLGILFILAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLVLTNGSFTLSTLTTTQEHMWLVLPTWPLTMMWFTSTLAETNRAPFDLSEGESELVSGFNVEYAAGPFALFFMAEYANIILMNSLTTALFFGAFHNPSLPELHTINFITKTLILTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSTSISFASI-P-PQT--MNP-LTLNIITLTLLSGTMITMFSSHWLPAWIGLEMNMFAMIPILMLKHNPR-STEAATKYFLVQTTASALLMMAVMINFMYSGQW--TIMKISNPLATHIITISITMKMGLAPFHFWVPEVTQGTPLLPGMILLTWQKLAPITIMSQITTSINPTLLLMM-AVLSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMTAIITYNPTLMTLNLTIYLLTTTSMFLLLMPQSSTTTLAL---THTWNTTPLLTTLMTTVLLSMGGLPPLSGFLPKWMIIQEMTKNNLIVMPTMMAILALLNLYFYMRLIYSTSLTLFPTTNNTKIKW-QFKPTTPPPLT-------PTLIILSTTIIPLSPMLCILE---MN-LILTLLINSALALLLMITAFWLPQLNSYTEKLSPYECGFDPVGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNPMLITALTLISLLALGLAYEWSQKG--LEWTE-MPSTYINILLAFTMALLGLLLYRSHMMSSLLCLEGLMLALFILSTLMALNTHHTLSAVLPIVLMVFAACEAALGLALLVMVSNTYGLDYVQNLNLLQCMLKLIIPTIMLIPLTWLSKNNMIWINSTSHSLLISLTSL-SMLYQTTNNSLNFS-PLFFTDPLSTPLLILTTWLLPLMIMASQSHLHKDTTTRKKTYISMLISLQMLLITTFTATELMMFYILFEATLIPTLIIITRWGNQAERLNAGLYFLFYTLIGSLPLLVVLTYIQNSIGSLNILITQYYSQPLP-TTW-----SSNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTLLDP-LTNSMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGASTLMIAHGLTSSLLFCLANTNYERTHSRTMMLTRGLQTLLPLMALWWLLANLSNLALPPTINLIGELFVIMPTISWSNITIALLGLNMTITSMYSLSMFIITQRGNPTNHMHTIKPSFTRENTLMLMHLLPLALLSINPKLILGLPY------MNLLPTL-TLTTFLILIAPVMMY---TSKTHHT-NQYPNYVKTS-IMYSMLTHLAPATMLIWSGQETIISNWHWMTIQTMKLTLSFKLDYFSLTFIPVALFVTWSIAEFSTWYMLSDLNINRFLKYLLLFLITMITLVTANNLLQLFIGWEGVGIMSFLLIGWWYGRADTNTAALQAVLYNRIGDIGFVLAMAWFLTHSNSWELQQIFMLNLN-ENTLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPMLQNNSPILTLTMCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKTLPLTTSSLIIGSLALTGMPFLAGFYSKDLIIESANTSNTNAWALLITLIATS-LTAMYSTRIIFFTLLNQPRFQTLTSINENNPSLLKPIKRLMLGSIFAGFLISNNMTPMTTPQMTMPTHLKLSALTITISGFLVAMELNQLTRNLQ--LKAPSHPYTFSNLLGFFPTIMHRTPPHLTLSISQNLALTLLDLTWLEKTAPKGLSRLNLLASN--NISNQKGLIKLYFIS---FLISL--LLMLLPL----------TYHLA--- +>Plecotus_rafinesquii_Rafinesques_big-eared_bat +----MNENLFASFITPT-MMGLPIVVLIIMFPSILFPSAT-RLINNRLITMQQWLIQLTTKQMMSIHTKKGQTWALMLTSLIMFIGSTNLLGLLPHSFTPTTQLSTNLGMAIPLWAGTVILGFRYKTKASLAHFLPQGTPLPLIPMLIIIETISLLIQPMALAVRLTANITAGHLLIHLIGGATLALMD-ISMTTASITFIILVLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWLITIMSTI-LTLFIMFQLKISKYYFYS-NPEPT-TIKSRKY-TTP-W-ETKWTKIYLP-HS-LPLR----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTMSTTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVVLMIFMVWEAFASKREVMMVELPTTNLEWLHGCPPPYHTFEEPTYVGH-K--------MAYPFQLGFQDATSPIMEELLSFHDHALMIVFLISSLVLYIISLMLTTSLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSVTIKTMGHQWYWSYEYTDYEDLTFDSYMIPTQELAPGQLRLLEVDNRVVLPTELTVRVLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVVWFHLGSTTLLSIGLVTNTLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMMQALLITILLGLYFTALQASEYYETPFTISDGVYGSTFFMATGFHGLHVLIGTTFLIVCFLRQLNFHFTPTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIINDSFIDLPTPSNISSWWNFGSLLGICLVLQISTGIFLAMHYTSDTATAFNSVTHICRDVNYGWVLRYLHANGASMFFICLYLHVGRGLYYGSYLYKETWNVGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPMGIPSNMDMIPFHPYYTIKDLLGLLAMITVLLTLVLFSPDMLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVIIPMLHTSKQRSMIFRPLSQCLFWLLVADLLTLTWIGGQPVEQPYIIIGQLASILYFTIIIALMPLASLAENRLL---KW--------MH--------LVNLMSTIIPILLAVAFLTLLERKILGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPMQPLTSSPTLFIIAPTLALSLALTMWIPLPMPHPLVNMNLGVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSILLMSGSFSLSTLIITQEHTWLVIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNTFTTILLLGAHNNLMFPELFTINLMTKTLLLTMVFLWVRASYPRFRYDQLMHLSWKSFLPLTLMLCMWHVSLPITLASI-P-PMT--MNP-LIFSLVTATMMSGTLMVMMSSHWFMVWVGFEINMLAMIPLLTKQHNPR-STEAATKYFLTQATASMILMMAVITNLLHTGHW--SVTKTIDPATSAMMTMALTMKLGLAPFHFWLPEVAQGIPLSSGLILLTWQKLAPLSVLYMTMPLMNTTLLTTM-SLLSIAVGGWGGLNQTQLRKIMAYSSIAHMGWMTSVLTYNPTMTLLNLYIYILMTLTTFMLLMQSSATTTTLM---SRTWNKAPLITMMLLITMLSLGGLPPLTGFLPKWLIIQEMVKNNSIIMPTLMALLSLLSLYFYMRIAYTTSLTMFPTANNMKINW-QLKPTKQTTCL-------PLMIITSTLMLPMSPLMLILE---MN-FMLTMFVNTLLASLLVTIAFWLPQMNTYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLMVMLSMSMFLITLLTLSLAYEWMQKG--LEWSE-MSLTYTNVMLAFTMSFVGLLMYRSHLMSSLLCLEGLMLSLFVLMTMTTLTTHMTLANMMPIIMLVFAACEAALGLSLLVAVSNTYGTDYVQNLNLLQCMLKTILPTMMLIPLTWLSKNNMLWINSTMHSLMISMTCL-PLMNQFCDNSLNLS-SMFFSDSLSAPLLMLTTWLLPLMIIASQNHLSCEPLVQKKLYITMMVSLQVFLIMTFSATELMLFYILFEATLLPTLVMITRWGNQTERLNAGIYFLFYTLAGSLPLLVALIYMQTTTGSLSLLLTQYWINHSS-NMW-----GNSVLWLAYMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITPILSP-SVNFMTYPFMLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQSPWSFMGATALMIAHGLTSSMLFCLANSNYERTHSRTMLLARGLQMILPLMATWWLMASLMNLALPPSINLIGELFVTMATFSWSNWSIMLLGINIVITALYTFYMLIMTQRGKYTYHIHNIKPSFTRENALMALHLTPLILLMTKPQIILGTLY------MNLFSTT-MLLSLTMLTLPLVTN---NNKTPSH-SNYPEYTKTM-ISYSFAMSLIPTIMYIQSGQETMISNWHWMTIQTMKLSLSFKLDFFSMMFVPTALFITWSIMEFSMWYMHSDPNINRFFKYLLTFLITMLILVTANNIFQLFVGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRVGDIGFLLSMAWFMVNSNSWELQQIFALNME-GTTLPAMGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPILGENKLAQTTALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPQLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLFKPLPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANVSYTNAWALLITLVATS-LTAVYSTRIIFFALLGKPRSSPTMLINENNPLLINPITRLLVGSIFAGFVISNNISPSTVPQMTMPPYLKITALAVTLLGFTLALELSHMTQNLK--HKTPTPPYKFSTLLGYYPLIMHRINPTMNLLLGQKLANMIMDLTWLEKTAPKSISKAQQTSSI--LVSNQKGMIKLYALS---FLLTM--LITTLTL----------NFLE---- +>Chalinolobus_tuberculatus_ +----MNENLFASFITPT-LMGLPIVIAIIMFPSMFFPSTT-RLISNRLIAMQKWIIRLITKQMMVIHTKKGQTWALMLVSLIMFIGSTNLMGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLALIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGAATLALMD-ISMTTALITFNILVLLTMLEFAVALIQAYVFTLLVSLYLHDNAMPQLDTSTWFITIMSMI-ATLFIMFQLKISKHYYYT-YPEPL-AIKTQTH-NTP-W-EAKWTKIYLP-LS-LPQH----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLSTTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVVLMVFMVWEAFASKREVLVVELPSTNLEWLHGCPPPYHTFEEPTYVNH-K--------MAYPFQLGFQDATSPIMEELLNFHDHALMIVFLISSLVLYIISLMLTTSLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSVTIKTMGHQWYWSYEYTDYEDLMFDSYMIPTSELSPGQLRLLEVDNRVVLPAELTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKFFEKWSSSMM----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSLLLLSIGLITNTLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRTHMMQALFITILLGLYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINSSFIDLPTPSSISSWWNFGSLLGTCLALQILTGLFLAMHYTSDTATAFNSVSHMCREVNYGWVLRYLHANGASMFFICLYMHVGRGIYYGSYMFKETWNTGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALVMVHLLFLHETGSNNPTGMPSNTDMIPFHPYHTIKDMLGFFVMMLALLCLVLFSPDMLGDPDNYSPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVIIPLLHTSKQRSMTFRPFSQCLFWLLVADLLTLTWIGGQPVEHPYVIIGQLASILYFLIIIVLMPLTSLMENHLL---KW--------MY--------LMNLLTMIVPILLAVAFLTLLERKMLGYMQLRKGPNVVGTYGLLQPIADAVKLFTKEPLQPLTSSPTLFIIAPTLALTLALTMWIPLPMPHPLINMNLGVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSTLLMNGSFTLSTLITTQEYIWLILPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTVILFLGAYNNPMFPEMYTINFTTKALLFTTFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVTLPIIMAGV-P-PQT--MNP-MTFSLIMVTMISGTLLVMTSSHWFLTWVGFEMNMLAIIPLLTKQHNPR-STEAATKYFLTQATASMLLMMAAIINLLYTGHW--SIQKLINPMASIMMTTALAMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSILYMISPVMNLNLLMMM-ALMSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMTILTYSPTMMLLNLYLYIPMTITTFSLLMLNSTTTTTSL---SYTWNKLPLATMIILITMLSLGGLPPLTGFLPKWLIIQELVKNNNITLSTIMALLALLNLYFYTRITYTTSLTMFPTTNNTKATW-QFKYPKQMPYL-------PPMIIISTLILPMSPLMMILE---MN-FMLTLLINTLLALLLVTIAFWLPHMNIYTEKSSPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWASQTNKLSIMLSMSLFLILLLIISLAYEWMQKG--LEWSE-MSLTYLNIMLAFSTSLLGLLMYRSHLMSSLLCLEGLVLSLFVLTTLMVLTINLTLTNLLPIILLVFAACEAALGLSLLVVVSNTYGVDYVQNLNLLKCMLKIILPTIMLIPLTWLSKGSTMWINSTMYSLLISMTCL-PLMNQSCDNSLNLS-LLFFTDSLSTPLLLLTVWLLPLMIIASQHHLSKEHILQKKLYITMMLLLQIFLIMTFSATELIMFYILFEATLVPTLIIITRWGGQAERLNAGIYFLFYTLAGSLPLLVALVYTQTSLGSLNLLLTQHWDYLSM-QTW-----SSSALWLSYMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLMLDP-ITNSMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAILIQSPWSFMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQMILPLMAAWWLLASLTNLALPPSINLIGELFVTMAMFSWSNFSIILLGINITITALYTLYMLTSTQRGKHTYHIHNIKPSFTRENTIMVLHLAPLMLLMINPQIILGTTY------MNVFSTM-MLLSLTILTLPLMSS---INKTLNP-KSYPDYIKTM-VSYSFMISLPPTIMFIQSGQEMMISNWHWMTIQTMKLTLSFKLDFFSMVFMPIALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLITMLILVTANNMFQLFIGWEGVGIMSFMLIGWWYGRTDANTAALQAILYNRIGDIGFILSMAWFMINSNSWEIQQIFILSTE-NTTLPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNKTIMTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLFKPMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAINTSYTNAWALLLTLIATF-LTAVYSTRIIFYALLGKPRFSSLILINENDPMLMNPITRLLIGSIFAGFIISNNIPPSTVPQMTMPLYLKITALLVTLTGFALAMELNNLTQNLK--YKNPSILFKFSTMLGYFPPIMHRTNPFTTLYISQKSATMLMDLIWLENTLPKLTAKMQQNLST--LISSQKGLIKSYFLS---FFITI--IVVMLLLIPS------SNL------ +>Rusa_unicolor_swinhoei_Formosan_sambar +----MNENLFASFIAPM-ILGLPLATLIVMFPSLLFPTSN-RLVNNRLISLQQWMLQLVSKQMMGIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGAALALMS-ISTTMALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LALFIIFQLKISKHNFHF-NPELT-LTKTQKQ-DNH-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRMVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGILLMVLFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILIFMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIIIGQLASILYFFIILVLMPITSTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPVLPELYTINFIMKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFMSSI-P-PQT--MNP-IIFILILSTMMMGTIMVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEAATKYLLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMFMTMALTMKMGMAPFHFWVPEVTQGIPLSSGLILLTWQKMAPMSVLYQIFPSINLDMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMMLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTILVLITLLSMGGLPPLSGFMPKWMIIQELTKNDSLILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSVLE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVALAGLLMYRSHLMSSLLCLEGMMLSLFVMASLTILNSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNITGSLNFLVLQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMVAHGLTSSMLFCLANFKYERIPSRTMILARGLQTFFPLMAPWWLLASLNNLALPPTINLIGELFVVKSSFSWSNITIILKGVNMVITALYSLYMLITNQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-TLVTLLLLTIPIMTT---SSDNYKT-SNYPLYVKTT-ISCAFITSMIPTMMFIHTGQEMVISNWHWLTIQTIKLSLSFGMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMPFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLNPN-DSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTIPQLTMPYYLKMMALTVTILGFILALEISNMTQNLK--FNYSTNIFKFSNMLGYFPTIMHRLAPYMNLTMSQKLASSLLDLIWLENILPKTTSLIQTKMSI--MVTNQKGLIKLYFLS---FLVTI--T------------------------ +>Potamochoerus_porcus_red_river_hog +----MNENLFTSFITPT-MMGLPIATLIIVFPSLLFPTPK-RLINNRTVSIQQWLIQLASKQMMAIHNQKGQTWSLMLMSLIMFIGSTNILGLLPHSFTPTTQLSMNLGMAIPLWSATVFTGFRHKTKTSLAHFLPQGTPAPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALLS-INTMTAFITFTILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFLTIMSMI-MTLFILFQLKISNYLYPM-NPEPV-EMKVQKH-DTP-W-EMKWTKIYLP-LS-LPLR----MFVNRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDQTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSAVELTSTNLEWLHGCPPPYHTFEEPTYINM-K--------MAYPFQLGFQDAASPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGEMRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSTSMLTG--------MTHQAHAYHMVNPSPWPLTGALSALLMTSGLALWFHFNSVLLLSLGLLTNTLTMYQWWRDIIRESTFQGHHTPVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGDRKHMLQALSITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKVINNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFIHVGRGLYYGSYMFTETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIIALATVHLLFLHETGSNNPTGIPSDMDKIPFHPYYTIKDILGALLMMLILLTLVLYSPDSLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILVLILMPMLHTSKQRSMMFRPLSQCLFWVLVADLIALTWIGGQPVEHPFIIIGQLASILYFLIILVLMPITSIIENSLL---KW--------MF--------VINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADALKLFTKEPLRPATSSTSMFIIAPILALSLALTMWIPLPMPYPLINMNLGVLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLITTQEHIWMIFTSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNAFTAILFLGAFHDMHTSELYTINFVLKTLALTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHISLPIMTASI-P-PQT--MNP-LTYATLIMTVMSGTMLVMISSHWLLIWIGFEMNLLAMIPVLMKNFNPR-AMEAATKYFLTQATASMVLMMAIIINFLYSGQW--TVTKLFNPMAMMMMTMALAMKLGLSPFHFWVPEVTQGISLQAGLLLLTWQKLAPLSVLCQISQSINPNLMLTM-AMLSILVGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNTTMTILNLLIYITMTLTMFMLLIHSSTTTTLSL---SLTWNKTPIITSLMMMILLSMGGLPPLSGFVPKWMIIQEMTKNESIIMPTLMAMTALLNLYFYMRLAYSSSLTMFPSVNNMKMKW-QFEYTKRMKLL-------PTMIVLSTLILPMTPALSSLN---MN-IMLTLLTNVTLASLLVLIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWALQTNDLKTMLTMALFLLTLLAASLAYEWTQKG--LEWTE-MPLVYMNIIMAFAIALMGLLMYRSHLMSSLLCLEGMMLSLFIMSTLIILNTHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGSDYVQNLNLLQCMLKIIIPTTMLLPMTWMSKHNMIWINTTVHSLLISLISL-SLLNQLNDNSLNFS-LMFFSDSLSTPLLILTTWLLPLMLMASQSHLSKETTTRKKLYITMLILLQLFLIMTFTATELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYIQNITGSLNFLIIHYWSHPLS-NTW-----SNVFMWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTILNP-LTDYMAYPFLMLSMWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERVHSRTMILARGLQTFLPLMATWWLMASLANLALPPSINLIGELLIITSSFSWSNITIILMGMNMMITALYSLYMLITTQRGKYTHHINNIKPSFTRENALMALHILPLLLLTLNPKVILGPLY------MNSFAPL-TLTTLTILVMPIMMS---NSNIYKT-NLYPNYVKNI-VSCAFTLSLVPLLMFIHTGQETTISNWHWMTLQTVELSLSFKMDYFSVMFTPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFILSMAWFLSHSNAWDFQQIFMLNDE-CPNMPLMGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMETNKLVQTITLCLGAITTLFTALCAITQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICMHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLYKAMPFTTTALTIGSLALAGMPYLTGFYSKDLIIEAASTSYTNAWALLMTLIATS-LTAAYSTRIIFFTLLGQPRFSPLVLINENNPLLINSIKRLLIGSIFAGFIISNSIPPMMTPNMTMPLYMKTTALVVTIMGFMLALELNNMTYYLK--LDHPSQTYKFSNMLGYYPSIMHRLPTYYNLSMSQKSASSLLDMIWLEIILPKMTSHIQMKMSI--MVSNQKGLIKLYFLS---FLITI--TVSMVLF----------NFHE---- +>Arctonyx_collaris_ +----MNENLFSSFITPT-IMGLPIVIIIIMFPSILFPSPN-RLVNNRLISIQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVIVGFRHKTKASLAHFLPQGTPLFLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGSATLALMN-ISTTTAMVTFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-ITLFFMFQLKVSKYYFPE-NPKQE-LTTMPKT-TTP-W-EEKWTKIYFP-LS-LPQQL---MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLMGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDMTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDVWAKIHFTIMFVGVNTTFFPQHFLGLSGMPRRYSDYPDAYTAWNTISSMGSFISLTAVMLMIFMVWEAFASKREVLTVELTSTNIEWLHGCPPPYHTFEEPAYVLS-K--------MAYPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINSPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLVMWFHFNSIYLLTLGMTTNVLTMYQWWRDIIREGTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGYRKHMLQALFITISLGLYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLTKIINNSFIDLPAPSNISTWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYMFPETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGIPSNSDKIPFHPYYTIKDILGALLLTLTLMILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALISSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEYPYIAIGQLASILYFTILLILMPVTSIIENNLM---KW--------MF--------MINIISLIVPILLAVAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAVKLFIKEPLQPLTSSITMFVMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFLGAFHTPYLPELYSINFTMKTILLTIFFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASI-P-PQT--MKP-PILITIMSTVILGTIMVLTSSHWLMIWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMLGIIINLLLSGQW--TLLNTPNSTTSNMMTIALAMKLGLSPFHFWVPEVTQGVPLSSGMILLTWQKIAPLSILYQISPSINPNLMMAM-AIVSVLVGGWGGLNQTQLRKILAYSSIAHMGWMIAVTTYNPTLMILNLVIYITMTLGTFMLFALNTSTTTLSL---SHMWNKLPLITSLILMIMLSLGGLPPLSGFIPKWMIIHELTKNNMIIAAMFMAMTALLNLYFYMRLTYATALTMFPSTNTMKMKW-QFENMKNTTFL-------SPLIVISTMLLPLTPMTLTLL---MN-MVLTLLINASLASLLILIAFWLPQLNIYTEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSINLNMTLTMALALILLLATSLAYEWTEEG--LEWNK-MSMAYINIFLAFTLSFMGLLIYRSHLMSSLLCLEGMMLSLFVMMTVTILVNHLTLASMAPIILLVFAACEAALGLSLLVMISNSYGTDYVQNLNLLQCMLKIIIPTMMLIPLTWLSKPNMIWINTTTHSMLISLISL-MYLNQSVDNNLNFS-LLFFVDSLSAPLLVLTTWLLPLMLMASQHHLSKETLTRKKLYITMLVMLQMFLIMTFTATELIMFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLWAQNNLGTLNLLMMQYWAQPLL-NSW-----SNALLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITVLLNP-LTNLMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAVLIQSPWSYMGAMALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMAAWWLFASLTNLALPPTINLVGELFVVMASFSWSNITIILMGINITITALYSLYMLITTQRGKYTHHIKNIKPSFTRENSLMALHLLPLLLLSLNPKLILGPLY---MKVINLFTSS-ILVTLFMLTIPIMMT---NTTMYTN-KLYPQYVKTT-ISYAFMISLIPMTIFLHLGQDTMISNWHWISIQTMKLSLSFKLDYFSMTFIPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLSNLNTWDLQQIFMTNHE-NLNIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTMQTITLCLGAMTTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLFKALPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLVATS-MTAAYSTRIMFFALLGQPRFSPTIMINENNPLLINSIKRLLLGSILAGFLISHNITPTTTPQMTMPHYLKLMALTVTILGFILALELSLTMQNLK--FKHPSNLFMFSNMLGHFPTTIHRLMPKVSLLTAQKSATTLLDMIWLEKILPKSISQFQMNSSI--TISNQKGLIKLYFMS---FMFTL--TLSLLML----------NFHE---- +>Hylobates_agilis_agile_gibbon +----MNENLFASFATPT-ILGLPAAVPIILFPSLLIPTSK-YLINNRLITTQQWLIQLTLKQMMAMHNTKGRTWSLMLISLITFIATTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVATGLRLKAKNTLAHLLPQGTPTPLIPMLIIIETISLFIQPVALAVRLTANITAGHLLMHLIGAATMALST-ISPPMTPIIFTVLALLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTTVWPTVIMSML-LALFLLMQLKTLNTRYHP-PASPK-LTNTKPH-NNP-W-EHKWTKIYSL-HS-LPPQS---MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSDTKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDQTYAKIHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVLSSVGSFISLTAVMLMIFMVWEAFASKRKVLMIEQPSTNLEWLYGCPPPHHTFEEPVYMKP----------MAHATQVGLQDATSPIMEELISFHDHALMIIFLISFLVLYALFLTLTTKLTNTNITDAQEMETIWTILPAIILVLIALPSLRILYLTDEINDPSFTIKAIGHQWYWAYEYTDYGGLIFNSYMLPPLFLEPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTVPSLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPVFTL----------MTHQSHAYHMVKPSPWPLTGALSALLLTSGLAMWFHFHSTTLLTLSMLTNALTMFQWWRDVVREGTYQGHHTMPVQKGLRYGMVLFITSEVFFFAGFFWAFYHSSLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLITILLGTYFTLLQVSEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIICLIRQLLFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTPLRKTNPLMKLINHSLIDLPAPPNISMWWNFGSLLGACLILQIITGLFLAMHYTPDASTAFSSVAHITRDVNYGWVIRYLHANGASMFFICLFLHIGRGLYYGSFLYLETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTNLVQWVWGGYSVDNATLTRFFTFHFILPFIITALAALHLLFLHETGSNNPLGISSQSDKITFHPYYTIKDVLGLFLLLLMLMCLVLFSPDLLGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAVIPALHTAKQQSMMFRPLSQLTYWLLVMNLLTLTWIGGQPVSYPFITIGQMASVLYFTTILVLMPAASLIENKML---KWT-------MP--------MTNLLLLILPTLIAMAFLMLTERKILGYTQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTATLYIIAPTLALTIALLLWTPLPMPNPLINLNLGLLFILATSSLTVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFNLSTLITTQEHIWLLLPAWPLAMMWFISTLAETNRTPFDLTEGESELVSGFNTEYAAGPFALFFMAEYVNIIMMNALTTMIFLGTTYNAHHPELYTTCFTIKTLLLTSLFLWIRTTYPRFRYDQLMYLLWKNFLPLTLTLLMWYISLSTMIASI-P-PQT--MNP-LAQPIIYSTIFAGTLITASSSHWLLAWVGLEMNMLAFIPVLTKKMNPR-STEAAIKYFLVQATASMILMMAILSNNLLSGQW--TMTNITNQYSSTMMLTALAMKLGMAPFHFWVPEVTQGTTLTSGLLLLTWQKLAPISIMYQIFPVVNVNILLTF-SILSIMVGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNITIFNLIIYIVLTTTAFLALNLNSSTTTLLL---SRSWNKLTWLLPLIPSTLLSLGGLPPLTGFLPKWLVIEELTKNGTLIIPTTMAIITLINLYFYMRLIYSTSITLLPTSNNVKMKW-QFENVKPTFLL-------PALITLTTLLLPIAPLTFPTP---MN-LALALTINTLLALLLMTITFWLPQLNTYMEKTNPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTSPSLTITSSLTLITILILSLVYEWSQKG--LDWVE-MPLIYMNITLTFTISLLGMLIYRSHLMSSLLCLEGMMLSLFIMSTLMALNTHSLLINIMPVILLVFAACEAAVGLALLVSISNTYGLDHIHNLNLLQCMLKLVIPTIMLLPLTWLSKKHMIWINTTTHSLIISPIPL-LFFNQANNNLFIYS-PSFSSDPLTTPLLMLTTWLLPLMIMASQHHLSNEPLLRKKLYLSMLITLQVSLIMTFTATELMMFYVLFETTLIPTLIIITRWGNQPERLNAGSYFLFYTLVGSLPLLIALVHTHNTLGSLNITLLTLSSQNLT-DSW-----SNNLMWLAYMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILSP-LTKHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAILIQTPWSFTGATVLMIAHGLTSSLLFCLANSNYERTHSRIMILSRGLQALLPLMAFWWLAASLANLALPPTINLLGELFVLVASFSWANTTIMLTGLNVLITALYSLYMLIMTQRGTLTHHIKNMKPSLTRENMLMLMHLFPLLLLTLNPNIITGFTP------MTMYATM-TILTLASLIPPITAA---LVSPNKK-NSYPHYVKMT-IASTFMISLFPTMMFMCTNQETIISNWHWTAAQTLELSLSFKLDYFSMMFIPVALFVTWSIMEFSLWYMHSDPNINQFFKYLLIFLTTMLILVTANNLLQLFIGWEGVGIMSFLLIGWWHAREEANTAAMQAILYNRIGDIGFILALTWFLLHANSWEPQQMILLNTS-PNSLPLAGLLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENNQLIQTLTLCLGAVTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTLPLTSTSLTIGSLALTGMPFLTGFYSKDLIIETANMSYTNAWALSMTLIATS-LTSAYSTRMILLTLTNQPRFPTLTNINENNPTLLNPIKRLTIGSLLAGFLIINSIPPTSPSQTTIPLYLKLTALSITLLGFLAALDLYLLTNKLK--MKTPSYTFHFSNMLGFYPNTIHRTIPYASLIMSQNLASLLLDLTWLEKLMPKTISHHQISASI--TISSQKGMIKLYSLS---LLIPL--SLALLLVM----------------- +>Genetta_servalina_ +----MNENLFASFITPT-VMGLPVVILIIMFPSLLFPAPN-RLINNRLISLQQWLVQLTTKQMLSIHNYKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAATVVIGFRYKTKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTSVALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITILSMV-ITLFIVFQLKISKHEYLW-NPEPK-SASTLKQ-PNP-W-EKKWTKIYSP-LS-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMIWEAFASKREVAMVELTTTNLEWLHGCPPPYHTFEEPAYVSL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMGTRPGLYYGQCSEICGSNHSFMPIVLELVPLTYFEKWSVSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTLLLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLMVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLAKIINESFIDLPAPSNISAWWNFGSLLGVCLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGVYYGSYTFTETWNIGILLMFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGVVSDSDKIPFHPYYTIKDILGLLLLILVLMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFSIFLILMPISGIIENRLL---KW--------MF--------MINIISLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSISMFIMAPILALSLALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLTTLIITQEHMWLVIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHNPYMPELYTINFTIKTLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIITASI-P-PLT--MKP-PIFFLIMSTVISGTLIVMTSSHWMLTWIGFEMNMLAIIPILMKKFNPR-SMEASTKYFLTQATASMLLMMGIIINLLYSGQW--AVPNNPNPMASILMTTALAMKLGLAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPTINPNLLLPM-ATLSVLVGGWGGLNQTQLRKILAYSSIAHMGWMTAILLYNPTMMILNLTIYIIMTLTTFMLFMLNSTTTTLSL---SQTWNKMPLITSLIMMLMLSLGGLPPLSGFMPKWMIIQELTKNEMIIMPTFLAITALLNLYFYMRLTYATTLTMFPSTNNMKMKW-QFESTKKMIFL-------PPLIITSTMLLPLTPMISILD---MN-MLLVLLTNTLLSTLLVLIAFWLPQLNSYAEKVSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTKAPLTMLTMALLLILLLAASLAYEWTQKG--LEWTE-MSIVYINIFLAFTMSLMGLLMYRSHLMSSLLCLEGMMLSLFVMMSVTILSNHFTLANMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKTIIPTVMLIPLTWLSKPNMIWINSTAYSLLISLISL-TYLNQLNDNSLNFS-LLFFSDPLSAPLLVLTTWLLPLMLMASQFHLSKETLSRKKLYITMLVLLQLFLIMTFTAMELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALLYIQNTSGTLNFLIMHYWTKPIS-STW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLNP-LTDQMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNITIILMGTNIIITALYSLYMLITTQRGKYTHHVMNIKPSFTRENALMTLHMLPLLLLSLNPKIILGPVH------MNLFTLS-IMMTMFILLLPVIMS---NTQLYKS-NLYPRYVKTT-ISYAFTISTIPTMMFISSGQEAIISNWHWLTIQTLKLSLSFKLDYLSIIFISVALFVTWSIMEFSMWYMHTDPYINRFFKYLLMFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFIMAMAWFLTNSNTWDFQQIFIIQHN-NLNIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQNKTIQTLTLCLGAMTTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKLMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLTTLIATS-LTAAYSTRIMFFALLGQPRFNSLIMINENNPLLINSIKRLLIGSIFAGYLISYNIPPTMIPQMTMPHYLKLTALAVTIMGFILALELNLATKNLK--FKYPSTLFKFSNLLGYFPTIIHRLPPMMNLTMSQKSASMLLDAIWLENVLPKSISYFQMKSST--IISNQKGLIKLYFLS---FLITL--ILSLTLL----------NFHE---- +>Sapajus_xanthosternos_yellow-breasted_capuchin +----MNQNLFASFNMPM-ILGVPLATLFILFPTMLITPSN-NLNNNRFSSLQQWLIQLTLKQMMMNHTTKGQAWSLMLLTLITFITLNNLLGIMPYTFTPTTQLSMNLGMAIPLWMATVLMGLRFKTKATLAHFLPQGTPTPLIPMLIIIETISLFIQPVALAVRLTANITAGHLLMHLLGDTTLTLLS-IYLSSSVITIIVIILLITLELGVALIQAYVFTLLVSLYLHNNSMPQLDISPWPMVTLSMI-LSLFYAMQLKMLNFTFHT-TMLSK-LTKTQNQ-KTT-W-ELKWTKIYLP-LS-MCQ-----MFMNRWLFSTNHKDIGTLYLMFGAWAGATGTALSLLIRAELGQPGSLMEDDHVYNVIVTSHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGVGTGWTVYPPLAGNMSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPATTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNIISSVGSFISLTAVILMIFMVWEAFSSKRKVRTIEQMTTNLEWLYGCPPPYHTFEEAAYVKLLNEKG-----MATPAQLGLQNATSPIMEELITFHDHTLMIIFLISSLVLYIISLMLTTKLTHTSTMNAQEIEMIWTILPAIILIMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYEDLFFDSYIMPTYYLQPGEFRLLEVDNRTTLPMEADIRMLISSQDVLHSWTVPSLGVKADAIPGRLNQAMLASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWASYLYIV--------MTHQTHAYHMVNPSPWPLTGALSAFLLTSGLIMWFHFYYTTLLNAGLLASVMTMYQWWRDVVRESTYQGHHTTPVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPQTGGHWPPTGILPLDPMEVPLLNTAVLLASGVTITWAHHSLMEADQENSTQALSLTIALGIYFTYLQMSEYSETPFTISDGIYGSTFFMATGFHGLHVIIGTTFLATCYIRQQLCHFTPSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTSSRKTHPLMKIINSSFIDLPTPSNISSWWNFGSLLGACLTIQITTGLFLAMHYTPDTSTAFSSVAHITRDINYGWMIRLLHANGASLFFVCLFLHIGRGLYYGSFLSLKTWNIGTILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYTGHDLVQWIWGGFSVDKPTLTRFFTFHFILPFIIMALTTIHLLFLHETGSNNPSGMTSNPDKITFHPYYTAKDIFGLTLLLLLLMNLTLFTPDLLIDPDNFTLANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILTIIPTTHASKQQSMMFRPITQILFWTLVADLLTLTWIGGQPVEHPFETIGQTASITYFLII-ILIPLSALTENKLL---KW--------MF--------TINLLLLITPALIAMAFLTLMERKILGYMQLRKGPNTVGPYGVLQPIADAMKLFTKEPLLPSVSTTTLYMAAPTLALTIALLLWTPLPMPYSLINFNLGLLFVLATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLHSLITTQEQSWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFTATPYNMLTTELYTMNFMTKTLLLTILFLWIRTAYPRFRYDQLMYLLWKKFLPLTLALCMWYISMPMLLSGV-P-PQT--MNP-LAHLIISLTILMGTMITTLSSHWFLVWVGLELNMLAIVPMLAKNMSPR-STEASTKYFLTQASASMILLMAMFLNNLLYGQW--TINPPSNQILSTMMLIALTLKLGMAPLHFWLPEVTQGVPLIPTMLILTWQKLAPMSIIIQIFPSINSNTLLMI-SLMSIMTGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYNPNITTLSLLIYILLTISTLTTLYLNSNTTTLSL---SHTWNKLTWMLPMIPMMMMSLGGLPPLTGFSPKWAIMQEITKNNSLIFPLTMAMLTLMNLYFYMRLTYSISMTMFPTSNNTKINW-QLKYLKPTPLL-------SPLMTSSSLLLPITPLMLMT----MN-LTLTLMINTLLALLLITITFWVPQLNKYTEKHNPYECGFDPTTSAHLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTDNLMLTTNTVLTLLIILALGLAYEWTQKG--LDWVN-MPFIYINTTLAYSLSLLGLLIYRSHLMSSLLCLEGMMLSLFIMMTTMTLNMHLMLTYMLPITLLVMAACEAAVGLALLILISNLYGLDYVQNLNLLQCMLKIILPTTMMILTTYLSKSHMMWINTMICSLSISALTL-TILYMPN-NPCNLS-LTFFSDPLTSPLLALTTWLLPLMVLATQQHIYNNSFPRKKLYISMLITLQISLIMTFAATELILFYILFETTLIPTLIIITRWGYQPERLNAGSYFLFYTLTGSLPLLITLLYHSNNLGTLNILTMTTNTKELL-TSW-----TNNIMWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGSYGMMRVIPTLNP-LTENMSYPFLILSLWGMIMTS--SICLRQADLKSLIAYSSVSHMALVTLAILIQTPWSITGAMLLMVAHAFTSSLLFCLANSNYERIHSRTMMFTRGLQALFPLLALWWLLANLANLALPPTINLLGELFTILATFSWSNFTIMLTGSNMLITALYSLHMFTSTQRGPLTHSTSNTKPLFTRENTLMLMHTAPILLLTLNPKVMMGLTP--------MHFSI-TLMTLIPLLMPILIT---LVKSNKD-PLYPHHVKLA-IIYALITSTLSMMMFIFTDQESMISNWHWVTIQTIKLSLNFKLDFFSMMFTPVALYVTWSIVEFSVWYMSSDPNINQFLKYLLMFLITMLILITANNLLQLFIGWEGMGIMSFLLISWWYGRTEANTAALQAILYNRIGDIGFILAMAWFFLYSNSWDFQQMFILNST-TSLFPLMSLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLIIRFHPLIENNLLIQTLTLSLGAITTLFTAICALTQNDMKKIVAFSTSSQLG--LMTVTVGINQPHLAFLHICTHAFFKAMLFLSAGSIIHNLNNEQDIRKMGGLFKTMPFTASSLIIGNLALMGTPFLTGFYSKDLIIEAINTSYTNAWALTTTLAATS-LTAMYSIRIMFFTLTGHPRFTTSTSINENNNPLMNPIYRLAVGSVLAGFLISNCIPPTTYPQMTMPLHLKLTALSVTTLGLLMAMELNLLTNNMK--LSTPVKTYYFSNMLGFYSITTHRLNPHLNLTTSQNLIFTLLDLFWLEKSMPKTTMQMQTSMAT--ITSTQKGLVKLYFLT---FFIPP--ILALLLTI----------------- +>Sorex_tundrensis_tundra_shrew +----MNENLFASFATPT-MMGLPIVVLIILFPSIMFPAPN-RLINNRLVSLQQWLIQLTSKQMMAIHNQKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLMS-ISPITAFITFIILVMLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIVSMI-MTLFIVFQLKISKYLYPM-NPELK-SLKALKH-NSP-W-ETKWTKIYSP-LS-LPQQ----MFVTRWLFSTNHKDIGTLYMVFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMLGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGSINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIAGFVHWFPLFTGYTLSSTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVVVMVFMIWEAFASKREVTSVELTTTNIEWLYGCPPPYHTFEEPVYVNS-K--------MAYPFQMGLQDATSPIMEELMNFHDHALMIVFLISTLVLYIISSMLTTKLTHTNTMDAQAVETIWTILPAIILILIALPSLRILYMMDEINNPTLTVKTVGHQWYWSYEYTDYDELNFDSYMIPTTDLKPGDLRLLEVDNRAVLPMEMTVRVLITSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICGSNHSFMPIVLELVPLKVFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSMILMSIGLLANTLTMYQWWRDVVREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTHELGGYWPPAGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQALFITIALGVYFTFLQAAEYYEAPFTISDGIYGSTFFMATGFHGFHVVVGSTFLMVCFLRQLKYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKTHPLMKIVNSSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMYLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAGVHLLFLHETGSNNPSGLSSDADKIPFHPYYTIKDILGVLLLILALTSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAVVPFLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEHPFIIIGQLASILYFLLILVIMPITSLFENNLL---KW--------MF--------MINLLTLIVPVLLAVAFLTLIERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFIKEPLRPLTSSVSMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAVSSLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSYTLSTLIVTQEYTWLLMSTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFLGAFHSINFPELYSINFTIKALLLTISFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFTSSI-P-PQT--MNP-MILSIILFTIMTGTMIVLMSSHWFMIWIGFEMNMLAIIPMLMKNYSPR-SMEASTKYFMTQATASMILMLAIIMNLMYSGQW--TITNITNPTASVLMTMALVMKLGLSPFHFWVPEVTQGISLASGMILLTWQKIAPLSVLYQTFSSINLDMLLSM-SLLSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMIYEPTIMLLNLLVYITMTISTFTLFIFSSSTTTLSL---SHTWNKMPLIATLILTIMLSLGGLPPLTGFLPKWIIIQELTKNNSIILPTTMAILSLLNLFFYMRLSYSTSLTMFPTTNNNKMKW-QFENTKQIPFM-------APLITISTLTLPLAPILITLN---MN-MLMALIVNTLLASILVLIAFWLPQLNVYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTEQLNIMITTSLALITLLAMSLAYEWIQKG--LEWTE-MSLVHMNIALAFTVALLGLLMYRSHLMSSLLCLEGMMLTLFIMGTIMILNTHFTLANMLPIILLVFAACEAAVGLSLLVMVSNTYGVDYVQNLNLLQCMLKIILPTIMLIPLTWLSNKKVMWINTTIYGMLICLTTL-PLFNQPSNNDIYFS-PTFFSDSLSTPLLALTTWLLPLMLMASQYHLMNETETRKKLYISMLILLQIFLIMTFSATELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIYIQNLSGTLNFTITQLGTYNIL-NSW-----SNNFLWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITVMLNP-ITDTMAYPFLLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMATWWLLASLTNLALPPSINLIGELFIMLSSFSWSNMTMILMGVNVVITALYSLYMLILTQRGKYSFHINTIKPSFTRENALMALHIIPLLLLSLNPKLILGTMY------MNLYTST-LLTSLSMLILPVIMS---LFPIYKT-NNYPYYVKSI-ISYAFLTSLIPTFIFINMGHEEVISNWHWMTIQTMKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNVNRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFLFNTNSWELQQIFMLDMQ-HNNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLLENNKTIQTLILCMGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKALPFTTTSLITGSLALTGTPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-LTAVYSTRILYYSLLGQPRCSTLILINENNPLLINPIKRLLVGSIFAGFIISYNLTPMTIPQMTMPSYLKLTALFITLTGFALAYELNLITQNLK--LSHPHNYHKFSNMLGYFPTIIHRLFPQSTLLMSQKLSSMLLDLTWMENVLPKSVSKFQASSSI--TVSNQKGLIKLYFLS---FLITL--TISILLF----------NYHV---- +>Neomys_fodiens_Eurasian_water_shrew +----MNENLFASFATPT-MMGFPIVILIIMFPSIMFPTPN-RLINNRLVAIQQWLIQLISKQMMAIHNQKGQTWTLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVISGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGEATLVLMS-ISPATAFITFIILVMLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSML-ITLFIIFQLKISKYLYPM-NPELK-SLKALKY-NNP-W-ETKWTKIYSP-LS-LPQQ----MFVTRWLFSTNHKDIGTLYMIFGAWAGMAGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMLGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGSINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIAAFVHWFPLFTGYTLSSTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVVVMVFMIWEAFASKREVTSVELTTTNIEWLYGCPPPFHTFEEPVYVNT-K--------MAYPFQMGLQDATSPIMEELMNFHDHALMIVFLISTLVLYIISSMLTTKLTHTSTMDAQAVETIWTILPAIILILIALPSLRILYMMDEINNPALTVKTVGHQWYWSYEYTDYDELNFDSYMIPTTDLKPGDLRLLEVDNRAVLPMETTVRVLITSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICGSNHSFMPIVLELVPLKVFEKWSSSML----------MTHQTHAYHMVNPSPWPLMGALSALLLTSGLVMWFHFNSTILLSLGLLTNILTMYQWWRDVIREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTHELGGYWPPAGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKQMIQALFITIALGVYFTILQAAEYYEAPFTISDGVYGSTFFMATGFHGFHVIVGSTFLTVCFLRQLKYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNFRKTHPLMKILNNSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAGVHLLFLHKTGSNNPSGIPSDADKIPFHPYYTIKDILGVLLLILVLTSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALMPFLHTAKQRSMMFRPFSQCLFWILVADLITLTWIGGQPVEHPYVIIGQLASILYFLLILVLMPITSLLENNML---KW--------MF--------MLNLLTMIVPILLAVAFLTLIERKVLGYMQLRKGPNVVGPYGLLQPIADAMKLFTKEPLRPLTSSITMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAVSSLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQQYSWLLMSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFLGSFHINYLPELYSINFTIKALLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSLPIFTSSI-P-PQS--MNP-IIMTMIMSTVILGTLIVMTSSHWFMIWIGFEMNMLAIIPMLMKNFNPR-SMEASTKYFMTQATASMILMLAIIINLLFSGQW--TILNISNPTASMLMTVALVMKLGMAPFHFWVPEVTQGVPLTSGLILLTWQKIAPLSVLYQIYPSINPEMLLTM-SLLSLLVGGWGGLNQTQLRKIMAYSSIAHMGWMTTITIYNPTLMLLNLIIYIIMTMSTFMLFIYTSSTTTLSL---SHTWNKMPLISIFILTIMLSLGGLPPLTGFLPKWMIIYELTKNSNVILPTAMAILSLLNLYFYMRLTYSTSLTMFPTINNMKMTW-QYENTKQIPLM-------APMIIISTLTLPLAPLLVTLY---MN-MLLALLTNITLASILVMVAFWLPQLNVYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTQLNTMITMALALITLLAMSLAYEWFQKG--LEWAE-MSLVHMNIGLAFMVALLGLLMYRSHLMSSLLCLEGMMLTLFIMGTIMVLNMHFTLASMLPIILLVFAACEAAIGLSLLVMVSNTYGVDYVQNLNLLQCMLKIILPTVMLIPLAWLSNKNFMWINLTLYALLISLTTL-PLFNQYNNNETYFS-TMFFSDSLSTPLLMLTTWLLPLMLLASQNHLMNETETRKKLYVSMLILLQTFLIMTFSATELILFYILFEATLIPTLVLITRWGNQTERLNAGIYFLFYTLVGSLPLLVALVFIQNTSGSLNFTITQFWAENIP-NTW-----TNNFLWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRISVLLNP-ITETMAYPFLLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMATWWLLASLTNLALPPTINLIGELFIMMSTFSWSNITIILMGINVVITALYSLYMLIMTQRGKYSYHINTIKPTFTRENSLMTLHIIPLLLLSLNPKLILGTLY------MNLFSST-LITSLSMLTLPVLLS---MSSIYKT-SQYPYYVKTI-ISYAFLTSLIPTLIFINLGHEEIITNWHWMTIQTVKLSLSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPYMNRFFKYLLMFLITMMILVSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFFLSMAWFLYNSNSWEFQQIFSLDQN-YSTIPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLIENNKMVQSLILCTGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFYALPFTTTSLIVGSLALTGTPFLTGFYSKDLIIEAANTSYTNAWALLITLIATS-LTAVYSTRILYFSLLGQPRFPTLILINENNPLLINSIKRLLIGSIFAGFAISLNLPPMTIPQMTMPAYLKLTALLVTLLGFVLALELSLITQNLK--LPHPHNYHKFSNMLGYFPTVIHRLLPSTSLLMSQKLSSMLLDLTWMENILPKSISKFQISSSI--MVSNQKGLIKLYFLS---FLITL--ITAVMLF----------NFHV---- +>Eulemur_mongoz_mongoose_lemur +----MNENLFASFITPT-IVGIPIVMFIILIPSIFFPSPT-RLINNRLTSLQQWLIQLILKQLMLIHNIKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAAAVIKGFRHKTKMSLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLSS-ISPTTALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWPITILSMI-LTLLIVFQLKISKFNYPL-SLTLK-DTNKYSH-VSP-W-ETKWTKIYLP-LS-LPQQL---MFINRWFYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDTWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSIGSFISLTAVMLMVFMIWEAFASKREVLMVELTPTNLEWLHGCPPPYHTFEEPTYVKA----------MAYPVQLGFQDAASPIMEELLYFHDHTLMIMFLISSLVLYIISLMLTTELIHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEITTPSLTLKTMGHQWYWSYEYTDYENLCFDSYMTPPSDLKPGELRLLEVDNRVVLPTELPIRMLISSEDVLHSWTIPSLGVKTDAIPGRLNQATLMASRPGVYYGQCSEICGANHSFMPIVLELVPLKIFEEWLLSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNTTTLLSVGMLTNLLTMYQWWRDIVREGTFQGHHTSIVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGHRTHMLQALLITITLGIYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MNNIRKNHPLMKIMNSSFIDLPAPSNISSWWNFGSLLGACLALQIITGLFLAMHYTADTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFLCLFIHIGRGLYYGSFTLTETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIVALVLMHLLFLHETGSNNPLGTSSDSDKIPFHPYYTIKDLLGLLLLIILMMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILAIIPILHTAKQRSMLFRPLSQCLFWTLVADLLILTWIGGQPVEYPFIAIGQAASILYFTLILILMPMVSLIENKML---KW--------MF--------MVNLLLLIIPILLAMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPLPYPLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHTPETYTTSFTTKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLTSCI-P-PQM--MKP-IVLTLIMLTIFMGTTLTMISSHWLLMWIGLEINMLAMIPILMKKTSPR-STEAATKYFLTQATASMLLMFTIVTNAMYSGQW--SITNMYNQLISFTIILALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISIMLQIYPSTNPSILLLI-TTLSIMVGGWGGLNQTQLRKILAYSSIAHMGWMMAILMYCPSMTMWNLLIYLMLTIAVFTMLNINTSTTTLAL---SNLWNKTPMMTITILISLLSLGGLPPLTGFLPKWVIVQELTKNNNIMLATTMTILALLNLYFYLRLIYSTSLTMFPTLNNLKMKW-QFQQTKQMFLL-------PPLITLTTLTLPLSPALLILN---MN-LPLALTTTIILTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTINPKLMLTVALILVSILAAGLAYEWLQKG--LEWVE-MPSISTNIILAFITALLGMLIFRSHLMSSLLCLEGMMLSMFILSTLTILNLHFTASFMMPILLLVFAACEAAVGLALLVTVSNTYGLDYIQNLNLLQCMLKIIIPTIMLFPVTWYSNNNMVWINTTSHSLLISLTGL-LFLNQFNDNSNNFS-LTFFSDPLSSPLMILTMWLLPLMIMASQYHLTKESWILKKLYLSMLISLQMFLVMTFTATELIWFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYIQNYLGSLNMLTMKYYLQEMP-NSW-----SNNMLWMACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTILDP-LTKHMAYPFLMLCLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVVVGILIQTPWSFMGATILMVAHGLTSSMLFCLANSNYERIHSRTMLLARGIQALLPLMATWWLLASLTNLALPPSINLIGELFVVMASFSWSNITIILMGLNMLITALYSLYMLTITQRGKLTYHMHNLSPSLTRENTLMSMHMLPLLLLTLNPKIILGLTYC-----MNLLTSF-TLVTLMILTLPIIMN---IMNAYKDYYPFTLHVKSS-IACAFTTSLIPTALFISSGQEATIFNWHWMTIQTLKLFISFKLDHFSMLFMPVALFVTWSIMEFSMWYMHSDPKIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRMGDVGFILAMAWFLMYYITWEFQQMFMLNYD-PSMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKPIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWALTITLIATS-MTAIYSTRIIFYALLGQPRFTTSTPINENNPLLINSIKRLTLGSIFAGFFLTNNILPMNIPQMTMPLYLKFTALAVTITGFALAMELNLMTKNLN--LKLPSHLFKFSNSLGYYPTITHRLIPSHNLNQSQNTASLLLDLIWLEKAMPKNLSHLQMLSST--MISNQTGLIKFYFLS---FLMSL--LFTLLLFM----------------- +>Eulemur_rubriventer_red-bellied_lemur +----MNENLFASFITPT-IVGIPIVIFIIMIPSILFPSPT-RLINNRLTSLQQWLIQLILKQLMLIHNIKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAAAVIKGFRHKTKMSLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLSS-ISPATASITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITILSMI-LTLLIVFQLKISKFNYPL-SLTLK-DINKCPH-ANP-W-ETKWTKIYSP-LS-LPQQL---MFINRWFYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDTWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSIGSFISLTAVMLMVFMIWEAFASKREVLMVELTPTNLEWLHGCPPPYHTFEEPTYVKA----------MAYPVQLGFQDAASPIMEELLYFHDHTLMIMFLISSLVLYIISLMLTTELIHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEITTPSLTLKTMGHQWYWSYEYTDYENLCFDSYMTPPSDLKPGELRLLEVDNRVVLPTELPIRMLISSEDVLHSWTIPSLGVKTDAIPGRLNQATLMASRPGVYYGQCSEICGANHSFMPIVLELVPLKHFEEWLLSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNNTTLLSMGMLTNLLTMYQWWRDIVREGTFQGHHTSIVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGDRTHMLQALLITITLGIYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MNNIRKNHPLMKIMNNSFIDLPAPSNISSWWNFGSLLGACLTLQIITGLFLAMHYTADTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFLCLFIHIGRGLYYGSFTLTETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVLVHLLFLHETGSNNPLGTSSDSDKIPFHPYYTIKDLLGLLLLILLAMMLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALISSILILAIIPILHTAKQRSMLFRPLSQCLFWTLTADLFILTWIGGQPVEHPFITIGQAASILYFTLILILMPMASLIENKML---KW--------MF--------MVNLLLLIIPILLAMAFLTLAERKILGYMQLRKGPNVVGPHGMVQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPLPYPLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSNLITTQEYLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHTPETYTTSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLMSCI-P-PQM--MKP-IILTLIMLTIFMGTMLTMISSHWLLMWIGLEINMLAIIPILMEKANPR-STEAATKYFLTQATASMLLMFTIVTNAMYSGQW--GTTNIYNQLISFTIILALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISIMLQIYPSMNPNILLLI-TTLSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMMAILMYCPSMTMLNLLIYLMLTVAMFTMLNINTSTTTLAL---SNLWNKTPTMTITILISLLSLGGLPPLTGFLPKWIIVQELTKNNNIMLATTMTILALLNLYFYLRLIYSTSLTMFPTLNNLKMKW-QFQQTKQTFLL-------PPLITLTTLTLPLSPALLILN---MN-LPLALTTNIVLTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTDPKLMLTVALILVSILAAGLAYEWLQKG--LEWVE-MPSISTNIVLAFITALLGMLIFRSHLMSSLLCLEGMMLSMFILSTLTILNLHFTTSFMMPILLLVFAACEAAVGLALLVTVSNTYGLDYIQNLNLLQCMLKIIIPTIMLFPVTWYSNNTMIWINTTSHSLLISLAGL-SFLNQFNGNSNNFS-LTFFSDPLSSPLMILTMWLLPLMIMASQYHLTKESWILKKLYLSMLISLQMFLVMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYIQNYLGSLNMLTMKFYLQEMP-NSW-----SNNILWMACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTILDP-LAKHMAYPFLMLCLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVVVGILIQTPWSFMGATILMIAHGLTSSMLFCLANSNYERIHSRTMLLARGIQALLPLMATWWLLASLTNLALPPSINLIGELFVTMASFSWSNITIILVGLNMLITALYSLYMLTITQRGKLTYHTHNLNPSMTRENTLMSMHMLPLILLTLNPKIILGLTY------MNLLTSF-TLVTLMILTMPVIMN---IMNAYKD-YPFAXHVKSSXIACAFTTSLIPTALFISSGQEAIIFHWHWMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQMFMLSYD-PSMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWALTITLIATS-MTAIYSTRIIFYALLGQPRFTTSTPINENNPLLINSIKRLTLGSIFAGFFLTNNILPMNTPQMTMPLHLKLMAMTVTIAGFALAMELNLMTKNLN--LKLPSHLFKFSNSLGYYPTTTHRLIPSHNLNLSQNTASLLLDLIWLEKAMPKNLSHLQMLSST--TISNQTGLIKFYFLS---FLMSL--LFTLLLFM----------------- +>Pusa_sibirica_Baikal_seal +----MNENLFASFAAPT-MMGLPIVILIVLFPSILFPSPD-RLINNRLASIQQWLIQLTSKQMLSIHNHKGQTWALMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMD-ISTATALITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLIMILSMI-LTLFITFQLKVSKHHFPT-NPEPK-HTLLLKN-SAP-W-EEKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFASKREVAAVELTTTNIEWLHGCPPPYHTFEEPTYVVL-K--------MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMYLLMLGLTTNTLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFMRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNSFIDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYMHVGRGLYYGSYTFTETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDLVQWIWGGFSVDKATLTRFFAFHFILPFVVLALAAVHLLFLHETGSNNPSGITSDSDKIPFHPYYTIKDILGALLLILVLTLLVLFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIVPLLHTSKQRGMMFRPISQCLFWLLVADLLTLTWIGGQPVEHPYITIGQLASILYFMILLVLMPIASIIENNIL---KW--------MF--------MINIISLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSTTMFIMAPILALALALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIMMNIFTTLLFFGAFHNPYMPELYVVNFTVKTLALTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIISASI-P-PQT--MKP-PILIIIMSTVMSGTMIVLTSSHWLLIWIGFEMNMLAIIPILMKNHTPR-ATEASTKYFLTQATASMLLMMGIIINLMFSGEW--TISKIPNPIASGLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSINPKLLITM-AIASVLVGGWGGLNQTQLRKILAYSSIAHMGWMAVILTYNPTLMILNLTIYITMTLSTFMLFMHNSSTTTLSL---SNTWNKLPLMTSLILMLMMSLGGLPPLSGFTPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTMFPSVNNMKMKW-QFESAKKIILL-------PPLIIISTMLLPMTPMMSILE---MN-MALTLFTNTALASLLVLIAFWLPQLNTYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHTDNLTTMLTMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYANIFLAFIMSLMGLLMYRSHLMSSLLCLEGMMLSLFVMMTVTILNNHFTLASMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTMMLMPLTWMSKPNMIWINTTAYSLLISLVSL-SFLNQLGDNCMSLS-LLFFTDSLSAPLLALTTWLLPLMLMASQFHLSKEPLARKKLYITMLILLQLFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLFIQNNMGTLNFLMIQLWAQPLP-SSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITALLSP-LTSFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERTHSRTMILARGLQVLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNITIILMGTNIIITALYSLYMLITTQRGKYTYHIKNIKPSFTRENALMTLHLVPLLLLSLNPKIILGPIY------MNLFASS-IMTTMSMLTLPIVLT---STSIYKN-KLYPQYVKTT-ISYAFMISMIPTTMFIYSGQEMIISNWHWMTIQTIKLTLSFKLDHFSMIFVPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAVLYNRIGDVGFIVAMAWFLINLNTWELQQIFISHHN-NLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNTMVQTTTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKVLPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLLTLVATS-MTAAYSTRIMFFALLGQPRFNPMITVNENSPLLINSIKRLLLGSIFAGYLISYNITPTSTPQMTMPHYLKLTALAVTLLGFILALELNLTSQNLK--LKYPSNLFKFSNLLGYFPTIIHRYMPMVNLSASQKLASTLLDAIWLESALPKSISYFHMKSSV--TISNQKGLIKLYFLS---FIITL--ILALMMI----------NSHE---- +>Pusa_hispida_Ringed_seal +----MNENLFASFTTPT-MMGLPVVILIVLFPSILFPSPD-RLINNRLASIQQWLIQLTSKQMLSIHNHKGQTWALMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTAFITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLIMILSMI-LTLFITFQLKVSKHYFPT-NPEPK-HTLLLKN-STP-W-EEKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFASKREVAAVELTTTNIEWLHGCPPPYHTFEEPTYVVL-K--------MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMYLLMLGLTTNTLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFMRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNSFIDLPTPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYMHVGRGLYYGSYTFTETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDLVQWIWGGFSVDKATLTRFFAFHFILPFVVLALAVVHLLFLHETGSNNPSGITSDSDKIPFHPYYTIKDILGALLLILVLTLLVLFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIMPLLHTSKQRGMMFRPISQCLFWLLVADLLTLTWIGGQPVEHPYITIGQLASILYFMILLVLMPIASIIENNIL---KW--------MF--------MINIISLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSTTMFIMAPILALALALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIMMNIFTTLLFFGAFHNPYMPELYVINFTVKTLALTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIISASI-P-PQT--MKP-PILIIIMSTVMSGTMIVLTSSHWLLIWIGFEMNMLAIIPILMKNHTPR-ATEASTKYFLTQATASMLLMMGIIINLMFSGEW--TISKIPNPIASGLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSILYQISPSINPKLLITM-AIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMAVILTYNPTLMILNLTIYITMTLSTFMLFMHNSSTTTLSL---SNTWNKLPLMTSLILMLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTMFPSVNNMKMKW-QFESAKKIILL-------PPLIIISTMLLPMTPMMLILE---MN-MALTLFTNTALASLLVLIAFWLPQLNTYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHTDNLTTMLTMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYANIFLAFIMSLMGLLMYRSHLMSSLLCLEGMMLSLFVMMTVTILNNHFTLANMAPIILLVFAACEAALGLLLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTLMLMPLTWMSKPNMIWINTTAYSLLISLVSL-SFLNQLGDNCMSLS-LLFFTDSLSAPLLALTTWLLPLMLMASQFHLSKEPLARKKLYITMLILLQLFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLFTQNNMGTLNFLMIQLWAQPLP-NSW-----SNTHLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLSP-LTSFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQVLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNITIILMGTNIIITALYSLYMLITTQRGKYTYHIKNIKPSFTRENALMTLHLMPLLLLSLNPKIILGPIY------MNLFASS-IITTLSMLTLPIVLT---STSIYKN-KLYPQYVKTT-ISYAFMISMIPTTMFIYSGQEMIISNWHWMTIQTMKLTLSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAVLYNRIGDVGFIMAMAWFLINLNTWELQQIFISHHN-NLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNTTVQTTTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDVRKMGGLYKVLPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLLTLVATS-MTAAYSTRIMFFALLGQPRFSPMITINENSPLLINSIKRLLLGSIFAGYLISHNITPTSTPQMTMPHYLKLTALTVTLLGFILALELNLTSQSLK--LKYPSNLFKFSNLLGYFPTIIHRYMPMVNLSASQKLASTLLDAIWLESALPKSISHFHMKSSV--TISNQKGLIKLYFLS---FIITL--ILALMMI----------NSHE---- +>Lutra_lutra_Eurasian_river_otter +----MNENLFSSFITPV-MMGLPIVIVIVMFPSIMFPSPN-RLINNRLISIQQWLVQLTSKQMLAIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-INAATAMVTFMILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSITILSMI-ITLFLVFQLKVSKYYFPE-DPKPA-LVATPKP-VTP-W-EKKWTKIYFP-LL-LPL-----MFMDRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLTSSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTTFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLSTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMPMIFMIWEAFASKRGVLTVEHTSTNIEWLHGCPPPYHTFEEPTYVLS-K--------MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQAVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLVMWFHFNSMLLLTLGMATNTLTMYQWWRDIVREGTFQGHHTPTVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGISPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITISLGLYFTLLQASEYYEAPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIICFLRQLNYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSLIDLPAPSNISAWWNFGSLLGTCLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYMFPETWNTGIILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIILALATIHLLFLHETGSNNPSGIPSNSDKIPFHPYYTIKDILGALLLALMLMMLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFTLLLILMPIASIIENNLL---KW--------MF--------MINIISLIVPILLAVAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFVMAPVLALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLTIILLSVLLMNGSFTLSTLITTQEHLWLILPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNIPTTILFLGAFHIPYLPELYTVNFTMKTLLLTALFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASI-P-PQT--MKP-LVLTTIMTTIISGTIVVLMSSHWLTVWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMLGIIINLLLTGQW--TVLNTPNPITSNTMTMALAMKLGLSPFHFWVPEVTQGIPLSSGMILLTWQKIAPLSILYQISPSINPNLLMIM-AAMSVLAGGWGGLNQTQLRKILAYSSIAHMGWMIAVTTYNPTLMLLNLTIYTMMTLGAFMLFTLNSSTTTLSL---SHMWNKLPLTTSLVLMIMLSLGGLPPLSGFIPKWMIIHELTKNDMIIAAMFMVMTALLNLYFYMRLTYATALTMFPSTNTMKMKW-QFENTKNIILL-------PPLIVTSTMLLPLTPMMTTLF---MN-MMLTLLTNVSLASLLILIAFWLPQLNIYTEKAGPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSINLKTTLTTALMLVSLLAVSLAYEWTEEG--LEWNE-MSMVYINIFLAFTLSFMGLLIYRSHLMSSLLCLEGMMLSLFIMMTVTILVNHFTLASMAPIVLLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIMPTMMLIPLTWLSKHNMIWINTTAYSMLISLISL-MYLNQLPDNNLNLS-PLFFVDSLSTPLLMLTTWLLPLMLMASQHHLSKETLTRKKLYITMLVTLQLLLIMTFTATELIMFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLWLQNNLGTLNLLVIQYWAQPLP-NSW-----SNMLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITVLLNP-LTNHMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAVLIQSPWSYAGATALMVAHGLTSSLLFCLANSNYERIHSRTMILARGLQMLLPLMATWWLLASLTNLALPPTINLVGELFVVMSSFSWSNITIILMGVNITITALYSLYMLITTQRGKLTHHIKNIKPSFTRENSLMVLHLLPLLLLSLNPKIILGPIY---MKVINLFTSS-ILVTLLMLTIPIMMT---STTLYTN-KLYPQYVKTT-TSYAFMISLIPMMMFLYSGQDTMISNWHWITIQTMKLSLSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFILAMAWFLANLNTWDLQQIFMTNHK-NLSIPLTGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTMQTITLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDVRKMGGLFKALPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLVATS-MTAAYSTRILFFALLGQPRFNPIITINESNPLLINSIKRLLFGSIFAGFLISYNITPTTTPQVTMPHYLKTMALTVTVLGFILALELNLTTQNLK--FKYPSNLFKFSNMLGYFPTTIHRLMPKANLLMSQKSASTLLDMIWLEKILPKSVSHFQVKSSI--IITSQKGLIKLYFLS---FMLTL--ALSLLML----------NFHE---- +>Procyon_lotor_raccoon +----MNENLFSSFTTPT-MMGLPLIILITMAPSILFPSPA-RLINNRFISIQQWLICLVSKQMLSIHNHKGQTWALMLLSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALIS-INVPTALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-LTLFFVFQLKVSKHYFTN-DPKPK-STLMPKT-STP-W-EKKWTKIYSP-LS-LPLQ----MFMTRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQIPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFTHWFPLFSGYTLNDVWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSVGSFISLTAVMLMIFMVWEAFASKREVMMVELTSTNIEWLHGCPPPYHTFEEPTYVLL-K--------MAYPFQTGLQDATSPIMEELLHFHDHTLMIVFLISTLVLYIISSMLTTKLTHTNTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLDFDSYMIPTQELKPGELRLLEVDNRLILPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQISLMATRPGLYYGQCSEICGSNHSFMPIVLELVPYSHFEEWSITLL----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMSLLMLGLMTNVLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGILPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLSYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIVNNSFIDLPTPSNISAWWNFGSLLGICLLLQIATGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFMCLFLHVGRGLYYGSYTFSETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSNLVEWIWGGFSVDKATLTRFFAFHFILPFIITTLAMIHLLFLHETGSNNPAGITSESDKIPFHPYYTIKDILGILFLIFMLMGLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIIIPLLHTSKQRSMMFRPLSQCLFWFLVADLLVLTWIGGQPVEYPFIIIGQLASIFYFMILLVLMPTMNIIENNLL---KW--------MY--------MINIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLSSSTTMFIMAPVLALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWMIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHSPLMPEMYTINFTVKTLLLTMFFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVALPIITASI-P-PQT--MKP-STLIIIMSTVISGTMMVLISSHWLMVWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMILMLSITMNLMLTGQW--TVLSNNNQITANMMTIALSMKLGMSPFHFWVPEVTQGISLSSGMILLTWQKIAPLSILYQISPSINPDLLAIM-AIMSILIGGWGGLNQTQLRKILAYSSIAHMGWMAAVTTYNPTLMMLNLTIYIMITLGTFMLFTMNSSTTTLSL---SHMWNKFPLITSLVLTLMMSLGGLPPLSGFIPKWLIIQELTKNDMIIMPTLMAMMALLNLYFYMRLTYATALTMFPSMNNMKMKW-QFENTKKVTLL-------PPLIVISTMLIPLTPIMLALH---MN-MMLTLLTNTLLASLLVLIAFWLPQLNIYTEKASPYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSINLKTMLIMSLMLISLLAISLAYEWTEKG--LEWAE-MSMVYVNISLAFTLSLMGLLMYRSHLMSSLLCLEGMMLSLFVMMSITIMSNHFTLASMAPIILLVFAACEAALGLSLLVMISNTYGTDYVQNLNLLQCMLKIIIPTAMLIPLTWLSKPNMLWINTTTYSMLISFISL-IYLNQLIDNTLNLS-LLFFTDSLSAPLLVLTTWLLPLMLTASQFHLAKETLTRKKLYITMLITLQLFLIMTFTATELIMFYILFEATLLPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLWIQNDLGTLNFLIAQYWIQHTS-STW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITVLLNP-TMSFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAVLIQTPWSYTGATVLMVAHGLTSSALFCLANSNYERTHSRTMILTRGLQTLLPLMAAWWLLASMTNLALPPSINLIGELFVVMASFSWSNMTIVLMGTNIIITALYTLYMLIMTQRGKSTQHIKNIKPSFTRENALMALHLLPLLLLSLNPKIIMGAIH------MNLFASS-VIMALFMLTMPIMMT---NTQIYKN-KLYPQYVKTT-ISYAFMISLIPTLMFLYSGQEMIISNWHWITIQTLKLSLSFKLDYFSIIFMPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLIFLITMIILVTANNMFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDVGFILAMAWFLTNLNTWDLQQIFMTNCN-NLNMPMMGLLLAAIGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKHMQTITLCLGAMTTLFTALCALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLYKLLPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLVATS-LTAAYSTRILFFALLGQPRFSPIITINESNPPLINSIKRLLLGSIIAGYLITHNISPTTIPQMTMPHYLKMTALAVTILGFILALELNLTAQSLK--FKHSSNLFKFSNSLGYFPTTTHRLVPKMGLYTSQNSASTLLDAIWLEKVLPKSISHFQMKSST--TVSHQKGLIKLYFLS---FMITL--IISLTLL----------NFHE---- +>Canis_lupus_chanco_Mongolian_wolf +----MNENLFASFAAPS-MMGLPIVVLIVMFPSILFPAPN-RLINNRLISIQQWLIQLTSKQMLAIHNQKGRTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALIN-ISATTAFITFIILILLTILEFAVALXQAYVFTLLVSLYLHDNTMPQLDTSTWFIMILSMF-LTLFILFQLKISNHHYPE-NPMTK-STKITGQ-HNP-W-ENKWTKIYSP-LS-LPPQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAMVELTTTNIEWLHGCPPPYHTFEEPTYVIQ-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLEMVPLSYFETWSALMV----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHYNSMSLLTLGLTTNLLTMYQWWRDVIREGTFQGHHTPIVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGDCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLHYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIVNNSFIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYVFMETWNIGIVLLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPSGITSDSDKIPFHPYYTIKDILGALLLLLVLMSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILAFIPFLHTSKQRSMMFRPLSQCLFWLLVTDLLTLTWIGGQPVEHPFIIIGQIASILYFTILLILMPTIGVIENNLL---KW--------MF--------FINIISLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSMSMFILAPILALSLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHMWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHNPFMPELYSINFTMKTLLLTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVALPIITASI-P-PQT--MKP-PILIIIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYSPR-AMEASTKYFLTQATASMLLMMGVTINLLYSGQW--VISKISNPIASIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPSINTNLLMLM-ALASVLVGGWGGLNQTQLRKIMAYSSIAHMGWMTAIITYNPTMMILNLTLYILMTLSTFMLFMLNSSTTTLSL---SHMWHKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMILIPTLMAITALLNLYFYLRLTYSTALTMFPSTNNMKMKW-QFEYTKKATLL-------APLIITSTMLLPLTPMLSVLD---MN-VMLTLVTNVTLASLLVLIAFWLPQLNIYTDKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLTTMLIMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYINIFLAFILSLMGMLVYRSHLMSSLLCLEGMMLSLFVMMSVTILNNHLTLASMMPIVLLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTIMLIPLTWMSKPNMIWINTTTYGLLISLISL-FYLNQPNDNALNSS-LMFFSDSLSAPLLALTTWLLPLMLMASQHHLSKEPLTRKKLYISMLILLQLFLIMTFTASELIFFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALLYIHNFMGSLNFLMIQYWIQPLP-NSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLNP-LTNFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVVSSFSWSNITIILMGINITITALYSLYMLITTQRGKYSHHIKXIKPSFTRENALMTLHLLPLLLLXLNPKIILGPI-------MNMFTSC-MITALVILTLPIIMT---STKLYKN-KLYPYYVKTA-TSYAFMISMIPTMMFIYSGQETIVSNWHWMTIQTMKLSMSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLLFLITMMVLVTANNMFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAVLYNRIGDVGFIMAMAWFLLNLNTWNLQQIFITTND-SFNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNQTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKVLPFTTTSLIIGSLALTGMPFLTGFYSKDLIIESANTSNTNAWALLITLVATS-LTAAYSTRIMFFALLGQPRFSPMILINENNPLLINSIKRLLIGSVFAGYIISHSITPTTIPQMTMPHYLKMMALAVTILGFILALELNLTVQGLK--FNYPSNYFKFSNLLGYYPTIMHRLTPKTSLTISQKSASMLLDSTWLESILPKSISYFQMKSSA--LISNQKGLIKLYFLS---FMLTM--ILSLLIL----------NYHG---- +>Leptonychotes_weddellii_Weddell_seal +----MNENLFASFTTPT-MMGLPIVILIILFPSILFPSPN-RLINNRLISIQQWLIQLTSKQMLSIHNYKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLLLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLMD-ISTATASITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSIVILSMI-LTLFIMFQLKISKHHFPT-NPEPK-QTLLPKS-NTP-W-EEKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQIPLFVWSVLITAVLLLLSLPVLAAGITMLLSDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFTLDDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFASKREVATVELTTTNIEWLHGCPPPYHTFEEPTYVVL-K--------MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMYLLLLGLTTNTLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGIYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFMRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSFIDLPTPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFTETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFILPFVVSALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALLLILTLMLLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALALSILILAIIPLLHTSKQRGMMFRPISQCLFWLLVADLLTLTWIGGQPVEHPYITIGQLASILYFTILLVLMPITSIIENNIL---KW--------MF--------MINIASLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSTSMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIMMNIFTTLLFFGAFHAPYMPELYTINFTMKTLMLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIISASI-P-PQT--MKP-YILVIIMTTVMSGTMIVLTSSHWLLTWIGFEMNMLAIIPILMKNYNPR-AMEASTKYFLTQATASMLLMMGIIINLMFSGQW--TISKIPNPIASGLITIALAMKLGMAPFHFWVPEVTQGISLPSGMILLTWQKIAPLSVLYQISPSINPKLMIPM-AIASVLVGGWGGLNQTQLRKILAYSSIAHMGWMAVILAYNPTLMLLNFTIYIMMTLSTFMLFIHNSSTTMSSL---SQTWNKLPLVTSLILMLMLSLGGLPPLSGFTPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTTLTMFPSANNMKMKW-QFESTKKIILL-------PPLIITSTMLLPMTPMMSILE---MN-MVLALFTNTILASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHTNNLTTMLTMALLLISLLAASLAYEWTEKG--LEWAE-MTMVYANIFLAFITSLMGLLMYRSHLMSSLLCLEGMMLSLFVMMTVTILNNHFTLASMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIILPTMMLMPLTWMSKPNMIWINTTTYSLLISLISL-LFLNQLNDNCTNLS-LSFFTDSLSAPLLTLTTWLLPLMLMASQFHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLAPTLIIITRWGNQTERLNAGMYFLFYTLVGSLPLLVALLFIQNNMGTLNFLMLQLWSQPMP-NSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-LTNSMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQVLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNITIILMGTNIIITALYSLYMLITTQRGKYTHHIKNIKPSFTRENALMALHLMPLLLLSLNPKIILGPIY------MNLFTSS-IITSLSMLTFPVILT---STSIYKS-KLYPQYVKTT-ISYAFMISMIPTTMFIYSGKEMIISNWHWMTIQTMKLTLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAVLYNRIGDVGFIMAMAWFLINLNTWEFQQIFITHHD-NLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEYNTTVQTTTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLYKVLPFTTTSLIAGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLVATS-MTAAYSTRILFFALLGQPRFNPMITTNENNPHLINSIKRLLLGSIFAGYLISQNITPTTIPQMTMPYYLKLTALSVTLLGFILALELNLTSQSLK--LKYPSNLFKFSNLLGYFPIIIHRYVPKMNLSASQNLASTLLDTIWLESALPKSISYFHMKSST--TISNQKGLIKLYFLS---FMITL--ILALTMI----------NFHE---- +>Rattus_villosissimus_long-haired_rat +----MNENLFASFITPT-VMGLPIVVTIIMFPSILFPSSE-RLISNRLHSFQHWLIKLIIKQMMLIHTPKGRTWALMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVILGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTMLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIVSSM-ITLFILFQLKISSQTFPA-APSPK-IMTTKKT-NNP-W-ELKWTKIYLP-LS-LPQQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLNDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVLVMIFMIWEAFASKREVLSVSYSSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSASMI----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHYSSTILLSLGLLTNILTMYQWWRDIIREGTFQGHHTPIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMNQALLITILLGLYFTILQASEYYETPFSISDGIYGSTFFMATGFHGLHVIIGSTFLIICLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLFKIINHSFIDLPAPSNISSWWNFGSLLGVCLMIQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLYLHVGRGMYYGSYTFLETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFTFHFILPFIIAALAMVHLLFLHETGSNNPTGLNSDADKIPFHPYYTTKDLLGVFMLLLFLMTLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAFLPFLHTSKQRSLTFRPITQALYWILAANLLILTWIGGQPVEHPFIIIGQLASISYFSIILVLMPISGIIEDKML---KWN-------MY--------FINILTLLVPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSISLFIIAPTLSLTLALSLWIPLPMPHPLSNLNLGMLFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQMLITTQEHTWLLVPAWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFTLFFMAEYTNIILMNALTSIVFLGPLYYINHPEFYSINFMTETLLLTTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCTWYISLPIFLAGI-P-PYT--MNP-ITLIIIYFTIFMGPAITMSSSNLLLMWVGLEVSLLAIVPLLTNKKTPR-STEAATKYFLTQATASMIMLLTIILNYKQSGMW--MFQQQTNSMLLNLTLISLAMKLGLAPFHYWLPEVTQGVPMHIGLILLTWQKIAPLSILYQIYQLLNPTITTIL-AIASVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLAIYILLTIPMFISLMTNSATTINSF---SLTWNKTPMILTMASIVLLSMGGLPPLTGFLPKWAIISELLKNDCSILSTLMAMMALLNLFFYTRLIYSVSLTMFPTNNNSKMIS-HHMNLKHNPIL-------PTLTVLSTLTLPLSSQLMT-----MN-LFIVIMINITLSFILITIAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAVQTTSITTMTTTAFILITILALGLSYEWTQKG--LEWTE-MTSAFLNLTLAFTLSLLGTLMFRSHLMSTLLCLEGMMLSLFIMTSTSTLNSNSMASMTIPITILVFAACEAAVGLALLAKISNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLTWLSTNKKVWTNVTSYSFLVSLMSL-SLLWQNDENYLNFS-IMFSSDPLSTPLIILTTWLLPLMILASQNHMKKETSTHQKLYISMLISLQILLIMTFSTTELILFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALLSIQNSMGTLNFLVLSLTTQPLS-STW-----SNSIMWLACMMAFMVKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRVSIILDP-LTKSLAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAIMIQTPWSFMGATVLMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMVFPLMATWWLLASLANLALPPLINLMGELFIVMATFSWSNPSIILTATNIIITGMYSMYMIITTQRGKLTSHMNNLQPSHTRELTLMALHIIPLMLLTINPKLITGLTM------MNMMTSA-ILMILILLTAPIIIS---MTNLPKL-IDFPSYATSS-IKFSFFLSLLPLLLFFHYNTEYMITNWHWLTINSIKLSMSFKIDYFSILFLSVALFVTWSIMQFSSWYMHSDPHINRFIKYLMLFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRVGDIGFILAMTWFCLNMNSWELQQIFLT-NN-SNLVPLTGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFHPLTSNNSTIMTAMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGSMMKVMPFTSSCLIIGSLALTGMPFLTGFYSKDLIIEAINTCNANAWALMITLIATS-MTAMYSMRIIYFVTMTKPRYSPLITINENNPNLINPIKRLALGSIMAGFLISLNIPPTNIQVLTMPWYLKMTALLITILGFAIALELNNLTSNLSS-TNKATRPSLFSTSLGYFPSIMHRTIPQKTLNSSYKMSLNLLDLIWLEKTIPKSTSITHTHLSK--MMANQKGLIKLYFLS---FLITI--SLIFILHTL---------NPEWFQ- +>Halichoerus_grypus_gray_seal +----MNENLFASFTTPT-MMGLPIVILIVLFPSILFPSPD-RLINNRLTSIQQWLIQLTSKQMLSIHNHKGQTWALMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMD-ISTTTAFITFIVLILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLIMISSMI-LTLFITFHLKVSKHYFPT-NPEPK-HTLLLKN-SAP-W-EEKWTKIYSP-LS-LPLQ----MFMDRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFASKREVAAVELTTTNIEWLHGCPPPYHTFEEPTYVVL-K--------MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMYLLMLGLTTNTLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFMRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNSFIDLPTPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYMHVGRGLYYGSYTFTETWNIGIILLFTIMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTGFFAFHFILPFVVLALAAVHLLFLHETGSNNPSGIMPDSDKIPFHPYYTIKDILGALLLILVLTLLVLFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIVPLLHTSKQRGMMFRPISQCLFWLLVADLLTLTWIGGQPVEHPYITIGQLASILYFMILLVLMPIASIIENNIL---KW--------MF--------MINIISLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSTTMFIMAPILALTLALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIMMNIFTTLLFFGAFHNPYMPELYVVNFTVKTLALTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIISASI-P-PQT--MKP-PILIIIMSTVMSGTMIVLTSSHWLLIWIGFEMNMLAIIPILMKNHTPR-ATEASTKYFLTQATASMLLMMGIIINLMFSGEW--SISKIPNPIASGLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSILYQISPSINPKLLITM-AIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMAVILTYNPTLMILNLTIYITMTLSTFMLFMHNSSTTTLSL---SNTWNKLPLMTSLILVLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTMFPSVNNMKMKW-QFESAKKIILL-------PPLIIISTMLLPMTPMMSILE---MN-MALTLFTNTALASLLVLIAFWLPQLNTYSEKVSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHTDNLTTMLTMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYANIFLAFIMSLMGLLMYRSHLMSSLLCLEGMMLSLFVMMTVTILNNHFTLASMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTMMLMPLTWMSKPNMIWINTTAYSLLISLISL-SFLNQLGDNCMSLS-LLFFTDSLSAPLLALTTWLLPLMLMASQFHLSKEPLARKKLYITMLILLQLFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLFIQNNMGTLNFLMIQLWAQPLP-SSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITALLSP-LTSFMAYPFMMLSLWGMTMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERTHSRTMILARGLQVLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNITIILMGTNIIITALYSLYMLITTQRGKYTYHIKNIKPSFTRENALMTLHLMPLLLLSLNPKVILGPIY---MKVINLFASS-IITTLSMLTLPIVLT---STSIYKN-KLYPQYVKTA-ISYAFMISMIPTTMFIYSGQEMIISNWHWMTIQTMKLTLSFKLDHFSMIFVPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAVLYNRIGDVGFIMAMAWFLINLNTWELQQIFISHHN-NLNVPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNTMMQTTTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLYKVLPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLLTLVATS-MTAAYSTRIMFFALLDQPRFNPMITINENSPLLINPIKRLLLGSIFAGYLISYNITPTSTPQMTMPHYLKLMALTVTLLGFILALELNLTSQSLK--LKHPSNLFKFSNLLGYFPTIIHRYMPMVNLSASQKLASTLLDAIWLENALPKSISYFHMKSSV--TISNQKGLIKLYFLS---FIITL--ILALMMI----------NSHE---- +>Martes_foina_beach_marten +----MNENLFSSFITPT-VMGLPIVIVITMFPSIMFPSPN-RLINNRLVSIQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAVPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGTTLALMS-INTITAMVTFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-ITLFFMFQLKVLKYNFPE-NPEPK-LMSVSKS-TTP-W-EKKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDIWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVLTVELTSTNIEWLHGCPPPYHTFEEPTYVLS-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLVMWFHFNSTTLLTLGMTTNLLTMFQWWRDVVREGTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGSCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGLYFTLLQASEYYETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSFIDLPAPPNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYMFSETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALLLILALMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFAILLIFMPAISIIENNLL---KW--------MF--------MINIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFVMAPILALTLALTMWIPLPLPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEYLWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNTLTTILFFGAFHTPYLPELYSVNLTMKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASI-P-PQT--MKP-PILIIIMSTVISGTIMVLISSHWLMIWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMLGIVINLLLTGQW--TVLNMPSPTASSMMTMALAMKLGLSPFHFWVPEVTQGVPMSSGMILLTWQKIAPLSVLYQIAPSMNLNLLMAM-ATMSILVGGWGGLNQTQLRKILAYSSISHMGWMIAVTTYSPTLMMLNLTIYITMTLGTFMLFMLNSSTTTLSL---SHMWNKLPLIASLVLMTMLSLGGLPPLSGFIPKWMIIHELTKNDMVTMAMFMAMTALLNLYFYMRLTYATALTMFPSTNIMKMKW-QFENTKNTTML-------PPLIMISTMLLPLTPMMLTLF---MN-MILTLLINVSLASLLVLIAFWLPQLNIYAEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSINLKTTLIMALALISLLALSLAYEWTEEG--LEWNE-MSMVYINIFLAFILSFMGLLIYRSHLMSSLLCLEGMMLSLFTMMTVTVLTNHLTLASMAPIILLVFAACEAALGLSLLVMISNTYGTDHVQNLNLLQCMLKIIIPTMMLIPLTWLSKPNMIWINTTAYSMLISLIGL-TYLNQFTDNSLNFS-LLFFADSLSAPLLTLTTWLLPLMLMASQHHLSKETLTRKKLYITMLVMLQLLLIMTFTTTELIMFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLWLQNNLGTLNLLVIQYWAQPLL-NSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-LTDFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLVGELFVVMASFSWSNITIILMGINITITALYSLYMLITTQRGKYTHHIKNIKPSFTRENSLMALHLLPLLLLSLNPKIILGPIY---MKVINLFISS-MLITLFMLTLPIMMT---NTSMYIS-KLYPQYVKTT-ISYAFMISLIPAMMFLHLGQDTMISNWHWITIQTMKLSLSFKFDYFSMIFVPVALFVTWSIMEFSIWYMHSDPYINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMAMAWFLTNLNTWDLQQIFMINHE-NLNIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQNKTLQSITLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLVATS-MTAAYSTRIMFFALLGQPRFNPIIMINENDPHLINSIKRLLFGSIFAGFLISYNITPTTTPQMTMPHYLKTMALIVTILGFILALELNLMMQSLK--FKHPSDLFKFSNMLGYFPTIIHRLMPKMNLLMSQKSASTLLDMTWTEKILPKSISHFQMKSSI--AVSNQKGLIKLYFMS---FMLTL--ALSLLTL----------SFHE---- +>Sminthopsis_crassicaudata_fat-tailed_dunnart +----MNENLFTPFICPS-IMGVSTLPIIILFPCLIFSAPK-RWLPNRMQILQIWLIRLITKQMMLMHNKLGRSWTLMLMSLILFIATTNLLGLLPYSFTPTTQLSMNLGMAIPLWMGTVVMGFRNKPKASLAHFLPQGTPTPLIPMLIIIETISLLIQPLALAVRLTANITAGHLLIHLIGSAALALMS-ISLALSSITFIILFLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWLYVIAFTL-FGIFCAFQLQLIGIEMIYIYPPED-MIKLPDI-PFP-W-EKKWTKIYLP-LS-SVLVS---MFITRWLFSTNHKDIGTLYLLFGAWAGMIGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYAGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYMLNDMWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNVLSSIGSFISLTAVILMIFIIWEAFASKREVSSVELTTTNIEWLYGCPPPYHTFEQPVFIKS----------MPYPMQLGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYVLILMLTTKLTHTSTMDAQEVETIWTIMPAVILVLIALPSLRILYMMDEIYNPYLTVKAMGHQWYWSYEYTDYEELAFDSYMIPTQDLAPGQLRLLEVDNRVVLPMELPIRMLISSEDVLHAWAVPSLGLKADAIPGRLNQATLTSTRPGIYYGQCSEICGSNHSFMPIVLEMSTLKYFENWSHMMQ----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLTMWFHFHSILLLLIGITSMLLTMFQWWRDIVREGTFQGHHTPVVQKGLRYGMILFIMSEVFFFVGFFWAFYHSSLSPALELGGCWPPVGISPLNPLEVPLLNTAILLASGVSITWAHHSLMEGSRKQMIQALSITIALGLYFTILQAMEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSLFLTVCLLRQLFYHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKTHPLMKIINHSFIDLPAPSNISAWWNFGSLLGVCLMIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNLHANGASMFFMCLFLHVGRGIYYGSYLYKETWNIGVVLLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLAEWIWGGFSVDKATLTRFFAFHFILPFIIAALVIVHLLFLHETGSNNPSGINPDSDKIPFHPYFTIKDALGVMLLLLVLLSLALFSPDSLGDPDNFSPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLIIPFLHTANQRSMMFRPISQTLFWILTANLMTLTWIGGQPVEQPFIIIGQLASILYFMLILILMPLAGAFENYMLK-PKW--------MF--------ILNLLLYIIPILLAVAFLTLIERKVLGYMQFRKGPNIVGPYGLLQPFADAVKLFTKEPLRPLTSSILMFILAPILALSIALTIWTPLPMPNSLLDLNLGLLFILSLSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVSLAIILLSVMLINGSFTLKTLSTTQENWWLIITTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIAMNAITTILFMGSSLTLNLTHIDSITFMMKTLLLTMAFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLWYISLPIALSCI-P-PQL--MSP-YVLIILSLSLLMGTCLTLFSNHWFTAWMGLEINTLAIIPLMTFPNNPR-TMEAATKYFLTQATASMVMMFAIVYNAWMTNQW--TLFQLSDQWASTSMTLALAMKLGLAPFHFWVPEVTQGISLLSGMILLTWQKIAPTAIIYQIAPCLDMNILITF-ALLSTILGGWGGLNQTHMRKILAYSSIAHMGWMVVIVHINPTMTILNLTIYIIATLTTFLTLNITNTTKVKSL---GSLWNKSTPTTIIIMLTLLSLGGLPPLTGFMPKWLILQELIYNGNIATATIMALSALLNLFFYMRIIYASSLTMFPSTNNSKMQW-FHHSMKPTTII-------PTAAIISSLLLPLTPMFIMLT---MN-MILTLMINSALATIIVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQLPTTKTMLILSFSLIILLTGGLAYEWYQKG--LEWTE-MLSINLNLIVAFLLALMGVLIYRSHLMSTLLCLEGMMLSLFILMTLLITHFHMFSMSMTPLILLVFSACEAAIGLALLVKISATHGSDHIQNLNLLQCMLKVLTATFMLIPLTWCSKKPWIWINTTTHSFLISIWSL-TLLYHNSDLGYNYN-PSFSLDSLSGPLLVLSCWLLPLMMIASQNHLAHEPLTRKKIYLTMLIVLQLSLIMAFASSELIMFYILFETTLIPTLIIITRWGSQNERLNAGLYFLFYTLVGSLPLLVALLYLHTNLGSLHILTMSLMTPTMD-PSM-----STTMLWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITTLTEP-ATTNLCYPFMILSLWGMVMTS--SVCLRQTDLKSLIAYSSVSHMGLVIVAALMQSPLSFMGASVLMIAHGLTSSMLFCLANTNYERIHSRTLILTRGLQMILPLMCAWWLLASLANLAQPPSINLLGELMVIMTTFSWSNFSLILLGVNTVITALYSLHMLITSQRGKFTHHMNPIKPTFTREHVLMALHLLPLLIISISPKLILGPT-------MNYLLNSSLLLSISMLTFPLIYN---ILLPHKS-SNFPALCKNT-VKLAFFISTIPFALFIYSGQEATITNWQWLSMNSFNLTMSFKLDYFSITFIPIALYVTWSILEFSMWYMHSDPNIHRFFKYLITFLFTMIILVTANNLFQLFIGWEGVGIMSFMLIGWWFGRTDANTAALQAVLYNRIGDIGFILTMAWLMINSNSWDIQQILMTNTG---TLALLGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFSPAMASNQMALTIMLCLGGITTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTLGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLTLLPITSAAIMLGSLALMGTPFLAGFYSKDSIIEAMNTSHVNTWALLITMVATT-LTAVYSMRVIHFALLKEPRFLPMSPLNENNPHLINPIMRLALGSIFAGFLLTYNLPPTTMIPMTMPTFTKLSALIVTILGILMAMELNSLTNKMP--NKSLIHTHNFSNLLGYFTHIFHRVNPLVNLHLGQHIATMLIDLSWYEKTGPKGQANIHSSASS-SSTSTQKGMIKTYFLS---FVVSI--VLTLMIVQL---------------- +>Mirounga_leonina_Southern_elephant_seal +----MNENLFTSFATPT-MMGLPIVILVILFPSILFPSPD-RLINNRLTSIQQWLIQLTSKQMLSIHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRYKMKMSLAHFLPQGTPLLLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLMS-ISTATASITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTVILSMI-LTLFIMFQLKISKHHFPM-NPELK-QTSLLKS-NAP-W-EEKWTKIYSP-LS-LPLQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQIPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFTLDDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFASKREVATVELTTTNMEWLHGCPPPYHTFEEPTYVVL-K--------MAYPFQMGLQDATSPIMEELLYFHDHTLMIVFLISSLVLYIISLMLTTKLTHTNTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMYLLLLGLTTNTLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFMRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSFIDLPTPPNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHMGRGLYYGSYTFTETWNIGIILLFTIMATAFMGYVLPWGQMSFWGATVITNLLSAVPYVGDDLVQWIWGGFSIDKATLTRFFALHFILPFVALALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALLLILTLMLLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIIPLLHTSSQRGMMFRPISQCLFWLLVADLLTLTWIGGQPVEHPYIIIGQLASILYFTILLVLMPITSIIENNIL---KW--------MF--------MINIASLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSTSMFIMAPILALTLALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASGSGYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIMMNIFTTLLFFGAFHTPFMPELYTINFTMKTLMLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIISASI-P-PQT--MKP-HILIAIMTTVMSGTVIVLTSSHWLLTWIGFEMNMLAIIPILMKTHNPR-ATEASTKYFLTQATASMLLMMGIIINLMFSGQW--TISKIPNPIASGLMTIALAMKLGMAPFHFWVPEVTQGVPLSSGMILLTWQKIAPLSVLYQISSSINPKLMISM-AIVSVLVGGWGGLNQTQLRKILAYSSITHMGWMAIILTYNPTLMLLNLTIYIMMTLSTFTLLIHNSSTTMSSL---SQSWNKLPLTTSLILMLMLSLGGLPPLSGFMPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTTLTMFPSANNMKMKW-QFESTKKIILL-------PPLIITSTMLLPMTPMMSILE---MN-MVLALFTNTILASLLVLIAFWLPQLNIYSEKVSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHTDNLTTMLTMALLLISLLAASLAYEWTEKG--LEWAE-MTMVYANIFLAFIMSLMGLLMYRSHLMSSLLCLEGMMLSLFVMMTVTILNNHFTLASMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIILPTMMLMPLTWMSKPNMIWINTTTYSLLISLISL-SFLNQLNDNCMNLS-LLFFTDSLSAPLLALTTWLLPLMLMASQFHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQTERLNAGMYFLFYTLVGSLPLLVALLFIQNNMGTLNFLMLQLLTQPML-NSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMTMMLNP-LTNSMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQMLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNITIILTGTNIIITALYSLYMLITTQRGKFTHHVKNIKPSFTRENALMALHLIPLLLLSLNPKIILGPIY------MNLFTSS-IITSLSMLTLPIILT---STSIYKN-KLYPQYVKTT-ISYAFMISMIPTMMFIYSGKEMIISNWHWMTIQTMKLTLSFKFDYFSMIFMPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAVLYNRIGDVGFIMAMAWFLINLNTWELQQIFIIHHD-NLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLTEHNTLMQTATLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKALPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANMSNTNAWALLLTLIATS-MTAAYSTRIMFFTLLGQPRFNPMITTNENNPLLMNSIKRLLLGSIFAGYLISHNITPTTIPQTTMPYYLKLTALTVTLLGFILALELNLTSQSLK--LKHPSTLFKFSNLLGYFPTIIHRYMPEMNLSASQKLASTLLDSIWLENVLPKSISYFHMKTSI--TISNQKGLIKLYFLS---FVITL--ILALMMI----------NSPE---- +>Indri_indri_ +----MNENLFASFITPT-IVGIPIVVLIIMAPSILFPSST-RLITSRLTSLQQWLIQLVLKQLMMMHNIKGRTWALMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAAAVITGFRYKTKVSLAHLLPQGTPALLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLVGGATLVLTS-ISPTTASITLIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-LTLFLIFQLKISNFIYPL-NPESK-TINKHKC-TNP-W-ETKWTKIYLP-LS-LPQQL---MFINRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTVWNTVSSIGSFISLTAVMLMIFMIWEAFASKREVLTVELTPTNLEWLYGCPPPYHTFEEPSYVKA-S--------MAYPVQLGFQDAASPIMEELLYFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEITTPSLTLKTMGHQWYWSYEYTDYEDLYFDSYMTPSSDLKPGELRLLEVDNRVVLPTELSIRMLISSEDVLHSWTVPSLGVKTDAIPGRLNQATLMTSRPGIYYGQCSEICGANHSFMPIVLELVPLKYFEEWLSSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSNTLLLLGLLTNLLTMYQWWRDVVRESTFQGHHTRAVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGISPLNPLEVPLLNTAVLLASGVSITWAHHDLMEGNRTHMLQALLITISLGIYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTICFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLTKIVNSSFIDLPAPSNISSWWNFGSLLGACLILQIITGLFLAMHYTADTTTAFSSVAHICRDVNYGWVIRYLHANGASMFFLCLFIHVGRGLYYGSFTLSETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSATPYVGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITAFVMIHLLFLHETGSNNPLGIPSNSDKIPFHPYYTIKDLVGLILLILPLMTLVFFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIIPLLQTAKQQSMTFRPLSQCLFWILVMDLCTLTWIGGQPVEHPFITIGQMASILYFSLILIFMPTASLIENKML---KW--------MF--------MLNLLLLIIPILLAMAFLILIERKTLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLHPLTSSTLLYTIAPTLALFIALTMWAPLPLPYPLINMNMGLLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSALITTQEYTWLIIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNTLTTILFLGTLYNPHTPQTYTATFTAKALLLVTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPVLSSSI-P-PQM--MNP-ITLPVIMTSILTGTILTMVSSHWLLAWMGLEINMLAIIPILVKKINPR-STEAATKYFLTQATASMLLMMTIVISAMNTGQW--NITNMHNSLISFTIIIALMMKLGMAPFHFWVPEVTQGVTLIVGMLLLTWQKLAPISIMLQIYSSMNLNVLLPF-ALLSILVGGWGGLNQTQLRKILAYSSIAHMGWMMAILMYCPSLTILNLLIYLMLTITMFTMLNINTNTTTLTL---SNLWNKNPMITLAILISLLSLGGLPPLTGFLPKWMIVQEFTKNNNIVMATIMAIMALLNLYFYMRLIYSSSLTMFPTSNNMKMKW-QFQPTKHTLFL-------PPLIILSTLSLPLSPILLTLN---MN-ISLTLTIDISLALLLVTVAFWLPQLNIYTEKYSSYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTSNLKFTLMVALMLISILAAGLAYEWSQKG--LEWKE-MPSISMNIILAFATALLGTLMFRSHLMSSLLCLEGMMLSMFTLSTLIILNMHFTMSFMMPILLLVLAACEAAVGLALLVMVSNTYGLDYIQNLNLLQCMLKIIIPTIMLFPVAWYSNNSMIWINTTSHSLMISFLGL-SFLNQTSNNSNNFS-PNFFSDPLSSPLLMLTMWLLPLMIMASQYHLMKEPSLRKKFYLSMLISLQMFLVMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYMQNSSGSLNLLTMNFWLKELP-NSW-----SNNLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTVLDP-TTKHMAYPFLMLCLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQALLPLMATWWLLASLTNLALPPSINLIGELFVTMASFSWSNITIILMGLNMLITALYSLYMLITTQRGKPTYHMHNLNPSLTRENTLMSMHMLPLLLLTLNPKIILGPTF------MNLFSSF-TLVTLLILMLPILMN---LMNTNKD-SSYGPYVKTS-IACAFTTSLIPTTLFMFSGQEMTISNWHWMTIQTLNITLSFKFDYFSMLFVPVALFVTWSIMEFSMWYMNTDPDINQFFKYLLLFLIAMLTLVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLRLNTWEFQQMFMLNQN-LTTVPLAGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNKLIQTMALCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKIMPFTSSSLVIGSLALTGMPFLTGFYSKDLIIESANISNTNAWALMITLIATS-LTAIYSTRIIFYALVNQPRFPTTITINENNPLLMSSIKRLAFGSILAGFFLSNITLPMNNPQMTMPTYLKMTALAVTITGFILAMELNLLTNSLK--FKLPSQMFKFSEMLGFFPMTMHRLMPSLNLTMSQKTASLLLDLMWLEKTMPKNLSQLQVLSSI--IVSNQKGLIKLYFAS---FLTSI--ILTTLLIS----------------- +>Petaurista_alborufus_ +----MNENLFASFITPT-LMGLPIIILIISFPNVLFPSPN-RLVNNRLVSFQQWLIQLVLKQMMTMHNLKGRTWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRHKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLILTS-ISPPTAMITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIMSMF-LALFILFQSKISNHSYPS-NPSPK-DTKLMTQ-NTP-W-EKKWTKIYSP-LS-LPLH----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDSTWAKIHFTVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMIMIFMIWEAFASKREVLTVELTTTNLEWLHGCPPPYHTFEEPTYVKA----------MAYPFELGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINDPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFENWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSNSLLMLGLLTNTLTMYQWWRDIIREGTFQGHHTTIVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPVGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALTITIALGLYFTLLQASEYFETSFTISDGIYGSTFFMATGFHGLHVIIGSTFLSVCLLRQLKFHFTSGHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLIKIVNHSFIDLPTPSNISAWWNFGSLLGLCLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYIHANGASMFFICLYLHVGRGLYYGSYTYFETWNIGVLLLFTIMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIVTALVMVHLLFLHETGSNNPSGLISDSDKVPFHPYFTIKDILGALLLTLFLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILMLFPILHMSKQRGMMFRPLSQCLFWILAADLFTLTWIGGQPVEHPFIIIGQTASILYFTMYLIILPLVSMLENKLL---KW--------MF--------LINLLLLIVPVMLAMAFLTLVERKMLGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPSTSSTALFIIAPSLALTLAITMWIPLPMPQPLINMNLGVLFILATSSLAVYGILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQQYMWLLLPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFMGALLNPPIPETYTFSFTIKTLILTSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPITMACV-P-PQT--MNP-LTSSTIYFTLFLGTLITLISSHWLMIWVGLEMSLLSIIPILINKANPR-STEAASKYFLIQATASMILMMAVIINFMNSGQW--TIMNPINQVSSLMITMALSMKMGLAPFHLWVPEVTQGVPLMSGLILLTWQKIAPISIMFQIAPSINSPLIMTM-AMLSIMLGGWGGLNQTQLRKILAYSSIAHMGWMMAIITFNPTLTIFNLIIYILLTFNMFLLFYYNKKTTTLSL---SNSWNKSPLLILMTLAVLMSLGGLPPLTGFSPKWMIIKELVSNNNVIISTLMAVTALLNLYFYMRLIYSTSLTLFPSYNNTKIKW-QFENTKTMPFM-------STVTILSTLALPLMPMLSTLN---MN-LLITLTVNITIALLLVSVAFWLPQVNTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLMLMLTVALVLVLVLTLGLAYEWIQKG--LEWIE-MPLIALNVFLAYLTSLLGMFIYRSHLMSSLLCLEGMMLSMFILSTLMILNSHFTLSFMLPIILLVFAACEAAVGLALLVMVSNTYGLDYVQNLNVLQCMLKIILPTILLAPTMWFSKSSLIWINSSIHSLMISFIVL-LSLSHVDDNNLILS-PSFFSDPLSTPLLILTAWLLPLMIMASQNHLAKEPLIRKKLYILMLISLQLFLIMTFSASELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIYIQKSMGSLNFLISFYEPNNLP-SSW-----TSNILWLACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITTILHP-ITSTMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQSILPMMAMWWTLASLTNLALPPTINLIGELFIISSSFSWSNITIILMGMNMLITALYSLYMLITSQRGKFTYHMSNINPSFTRENTLMLMHILPLILLSINPKMILGQLY------MNLMSSL-TLMSLITLTFPILLT---TTKLYET-DKYPNYVKTS-IVWALVFCFLPTLMFINSNCELIISNWHWMTIQTINLTMSFKLDYFSVMFMPIALFVTWSIMEFSMWYMHSDPYINRFFKYLLLFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILTMAWFLMNSNSWELNQLFML--N-TPLLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPMIENNETAKTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKAMPFTSSSLIIGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALTITLIATS-LTAIYSTRIIFFALMGQPRFPTLAPINENNPLLINSIKRLLIGSIFAGFLLSHNIPPMNIPLLTMPTYLKTTALLVTILGFTLAMELNQLTLNLK--TSFYSYPSKFSNMLGYFSTTMHRTYPYLNLHLSQKAASTLLDLIWMEKSIPKLIANFQSAASI--TTSNQKGLIKLYFLS---FLISI--ILALTFLT---------YSPE---- +>Bos_taurus_cattle +----MNENLFTSFITPV-ILGLPLVTLIVLFPSLLFPTSN-RLVSNRFVTLQQWMLQLVSKQMMSIHNSKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFTILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKVSKHNFYH-NPELT-PTKMLKQ-NTP-W-ETKWTKIYLP-LL-LPL-----MFINRWLFSTSHKDIGTLYLLFDAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNAVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMTLLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG---MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMAIAMVHLLFLHETGSNNPTGISSDVDKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILALIPLLHTSKQRSMMFRPLSQCLFWALVADLLTLTWIGGQPVEHPYITIGQLASVLYFLLILVLMPTAGTIENKLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSASMFILAPIMALGLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVVLMSGSFTLSTLITTQEQMWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTAILFLGTSHNPHMPELYTINFTIKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILTSGI-P-PQT--MNP-IIFIIILLTIMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKNHNPR-ATEASTKYFLTQSTASMLLMMAVIINVMFSGQW--TVMKLFSPMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNLILTL-SVLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTMFMANSTTTTLSL---SHTWNKTPIMTVLILATLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFPLMKKMTFL-------PTMVVLSTMMLPLTPMLSVLE---MN-LMLALLTNFTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTANLNTMLTMALFLIILLAVSLAYEWTQKG--LEWTE-MSMVYMNIMMAFTVSLVGLLMYRSHLMSSLLCLEGMMLSLFVMAALTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWLSKNNMIWVNSTAHSLLISFTSL-LLMNQFGDNSLNFS-LLFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVH-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNP-MTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVNMVITALYSLYMLIMTQRGKYTYHINNISPSFTRENALMSLHILPLLLLTLNPKIILGPLY------MNMFSSL-SLVTLLLLTTPIMMM---SFNTYKP-SNYPLYVKTA-ISYAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPS-DSNMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQMTMPYYLKTTALIVTILGFILALEISNMTKNLK--YHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKAST--LVTNQKGLIKLYFLS---FLITI--LISMILF----------NFHE---- +>Phoca_groenlandica_harp_seal +----MNENLFASFAAPT-MMGLPIVILIVLFPSILFPSPD-RLINNRLASIQQWLIQLTSKQMLSIHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRYKTKMSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMD-ISTTTAFITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFIMILSMI-LTLFITFQLKVSKHYFPM-NPEPK-HTLLLKN-STP-W-EEKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFASKREVAAVELTTTNIEWLHGCPPPYHTFEEPTYVVL-K--------MAYPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVEPVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMVPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSTSML----------MAHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMYLLMLGLTTNTLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGIYFTLLQASEYYETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFMRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNSFIDLPAPSNISAWWNFGSLLVICLILQILTGLFLAMHYTSDTITAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYMHVGRGLYYGSYTFTETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFILPFVVLALAAVHLLFLHETGSNNPTGIVSDSDKIPLHPYYTIKDILGALLLILVLMLLVLFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAITPLLHTSKQRGMMFRPISQCLFWLLVADLLTLTWIGGQPVEHPYIIIGQLASVLYFMILLVLIPIASIIENNIL---KW--------MF--------MINIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSTTMFIMAPILALALALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIMMNIFTTLLFFGAFHNPYMPELYVINFTMKTLALTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIISASI-P-PQT--MKP-PILIIIMSTVMSGTMIVLTSSHWLLTWIGFEMNMLAIIPILMKNYTPR-ATEASTKYFLTQATASMLLMMGIIINLMFSGQW--TISKIPNPIASGLVTIALAMKLGMTPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSINPKLLITM-AIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMAVILTYNPTLMILNLTIYITMTLSTFMLFMHNSSTTTLSL---SNTWNKLPLMTSLILMLMMSLGGLPPLSGFVPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTTLTMFPSANNMKMKW-QFESTKKIILL-------PPLIIASTMLLPMTPIMLILE---MN-MALTLFTNTALASLLVLIAFWLPQLNTYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHTNNLTTMLTMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYANIFLAFIMSLMGLLVYRSHLMSSLLCLEGMMLSLFVMMTVTILINHFTLASMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIILPTMMLMPLAWMSKPNMIWINTTAYSLLISFISL-SFLNQLGDNCMNLS-LLFFTDSLSAPLLTLTTWLLPLMLMASQFHLSKEPLARKKLYITMLVLLQLFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLFIQNNMGTLNFLMIQLWAQPLP-NSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITVLLSP-LTSFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQVLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNITIILMGTNIIITALYSLYMLITTQRGKYTYHIKNIKPSFTRENALMMLHLMPLLLLSLNPKIILGPIY------MNLFASS-IITTLSLLTLPIILA---NTPIYEN-KLYPQYVKTT-ISYAFMISMIPTMMFIHSGQEMIVSNWHWMTIQTMKLTLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAVLYNRIGDVGFIMAMAWFLINLNTWELQQIFIIPHN-DLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNTTMQTITLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLYKVLPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLLTLVATS-MTAAYSTRIMFFALLGQPRFNPMIMINENNPLLINSIKRLLLGSIFAGILISYNITPTSTPQMTMPYYLKLTALTVTLLGFILALELNLTSQNLK--LKYPSNMFKFSNLLGYFPTIIHRYMPMVNLSASQKLASTLLDMIWLENMLPKSISYFHMKSSI--SISNQKGLIKLYFLS---FIITL--TLALMMI----------NSHE---- +>Eospalax_baileyi_Plateau_zokor +----MNENLFASFSTPT-LMGIPIVIAIIMLPTIMFSHSN-RIYNNRLVVFQQWIVQMIIKQMMSIHSQKGRSWTLLLISLIIFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPLWAGAVILGFRNKTKSALAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALLS-INIPTALITFLILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFNMILFSL-ITLFIIFQLKFSKFNFYT-TPLPK-TTNMTKN-PNP-W-ESKWTKIYSP-LS-LPLH----MFVTRWLFSTNHKDIGTLYLMFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVVVTAHAFIMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFIHWFPLFTGYTLNDTWAKIHFATMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSMGSFISLTAVLIMVFIIWEALASKREVKSVELTTTNLEWLHGCPPPYHTFEEPVYVKV-N--------MAYPFQYGLQDATSPIMEELMHFHDHTLMIVFLISSLVLYIISLMLTTNLTHTSTMDAQEVETIWTILPAVILVLIALPSLRILYLMDEINNPVLTVKTLGHQWYWSYEYTDYEDLNFDSYMIPTSELKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFEDWSMSMI----------MTHQTHAFHMVNPSPWPLTGAFSAFLLTSGLVMWFHFNSTTLLLMGLTTNLLTMIQWWRDVIREGTFQGHHTPVVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGKRLHMNQALLITILLGLYFTILQASEYFETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLLVCLLRQFNYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNMRKSHPLFKIINHSLIDLPAPSNISVWWNFGSLLGVCLGLQIFTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGMYYGSYNYLETWNVGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVVVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGFIIMFLFLMILVLFSPDMLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILVLLPLLHTSAQRSLMFRPISQCLFWILVADLFTLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPLAGILENKIM---KISK------MP--------FLNVLLTLLPILIAMAFLTLAERKILGYMQLRKGPNIVGPYGVLQPFADAMKLFIKEPLRPLSSSMSLFIIAPTLALTLALSLWIPLPMPFPLANLNLGALFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMSGSFSLSSLITSQESSWFLLSTWPLAFMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIILMNALSTIIFLSSLILPTLPELFTLNFMTKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISLPIILASI-P-PYT--MNV-LALIIILLTIFLGSLITILSSHLILMWAGLEMSMLAVIPALMYNSNPR-STEAATKYFLTQATASMIFLLAIILNYNNLGSW--EFHYNTEYYIFTLVLLALMMKLGLAPFHFWVPEVTQGIPILSGLLLLTWQKIAPLAILFQIAYSINSTIVPLS-AIMSVFIGGWGGLNQTQLRKILAYSSIAHMGWMVAVTMYNPSMMLLNLIIYMFLTTSMFITIYINNSTSIASL---TKMWNKSPLMISTTLIILLSLGGLPPLTGFLPKWMIIIELTKNNCIFMALSMTMMALLNLYFYTRLIYASSMTMFPSTNNMKTNI-HQSNNKNNLFL-------SPLIIISSLALPLSPIINVLY---MN-LILALTTNIILAFILVTVAFWLPQLNIYSEKAGPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWASQSNNLMTTLIMALVLIVILILGLLYEWLNKG--LEWTE-MSPVFLNLLLAFSLALLGTLLFRSHMMSTLLCLEGMMLSLFLMSSLISLNSQFPLAFIIPIIILVFAACEAAVGLALLVMVSNSYGTDYVQNLNLLQCMLKIVIPSIMMLPLIWLSKNSMIWINTTSHSFIIGLITL-FTLNQHNDTSSNFS-TVFFSDPLSSPLIILTAWLLPLMLLASQNHLKKEPMTYKKTYISLLVTLQILLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALIHSHNLMGTMNFIILNIQQPTNS-SSW-----SNHIMWLAFMMAFMVKMPLYGIHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRISILTDP-INKTMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVMIQTPWSYMGATALMIAHGLTSSLLFCLANTNYERIHSRTMILARGMQTILPLMGTWWMLGSLANLALPPSINLIGELVIITSSFSWANSTIILMGMNILITALYSLYMLISAQRGKTTYHTKNVSPSHTRESTIMALHILPTILLSLNPKFILGFPY------MNMSHSL-NFFILLTLMFPLLLS---FTKMIKP-VNLPKHVTNS-IKLSFLMSLIPLMSFLLLNNEFMISNWHWMTLNSIKLNMSFKFDFFSTLFIPVALFVTWSIMEFSLWYMHSDPNLDRFMKYLLMFLMTMIILVSANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFILSMIWFCTNLNSWELQQIFATSPNPTNNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFFPLTNNNQTILTLMLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLAKPMPFTSSCLTIGSLALTGTPFLTGFYSKDLIIEAMNTSYTNAWALIITLIATS-LTAVYSTRIIFFVVMSKPRFPPVISINENNPQLKKAINRLALGSIFAGFLISKLIPPMNNPIMTMPLYLKMTALLVTILGFTIAMELNNLTFFLT--SKYSSSTHHFSSLLGFFPYTLHRLLPNVNLKISQNIVSNLMDLIWLEKAIPKTIAHSNMLASM--KITNQKSLIKLYFLS---FLITI--TLIMLFQAT--------SYHEWFQ- +>Boselaphus_tragocamelus_nilgai +----MNENLFASFIAPM-ILGLPLVTLIVLFPSLLFPTSN-RLTNNRLISLQQWILQLISKQMMSIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIMFQLKISKHNFYH-NPELS-LTKTPKQ-TTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNETWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWTVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTVLLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPPVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG---MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFASVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMIHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILALMMLVLFAPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVMALVLSILILILMPLLHTSKQRSMMFRPLSQCMFWILVANLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPTASMIENNLL---KW--------MF--------MINILTLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKALLLTISFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-IIFIIILSTIMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKYNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALTMKLGMAPFHFWVPEVTQGISLSSGLILLTWQKLAPMSVLYQISPSINLNLMLTL-STLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLVIYIIMTSTMFMLFMANSTTTTLAL---SHTWNKAPVMTVLVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSSTKHMTLL-------PTMAVLSTMLLPLTPMLSVLE---MN-LMLALLTNFSLSTLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNMMLTMALLLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLVGLLMYRSHLMSSLLCLEGMMLSLFVMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTMHSLLISFTSL-LLMNQFGDNSLNFS-PTFFSDSLSTPLLILTMWLLPLMLMASQSHLSKENLTRKKLFITMLILLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVHIQNTMGSLNFLMLQYWVQPMP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGTNMVITALYSLYMLIMTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLTTLLLLMMPIMMT---SSSTYKT-SNYPLYVKTA-ISCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPD-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTVGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIMINENNPLLINSIKRLLIGSLFAGFIISNNIPPTTVPQMTMPPHLKMMALTVTILGFILALEVSNMTQNLK--FHHPSNTFKFSNLLGYFPTIMHRLTPYMNLTMSQKSASSLLDMIWLENILPKTTSLIQMKTST--MITSQKGLIKLYFMS---FLITI--MISMILF----------NFHE---- +>Moschus_berezovskii_Chinese_forest_musk_deer +----MNENLFASFITPM-ILGLPLATLIVMFPSLLFPTSN-RLINNRLLSLQQWMLQLVSKQMMGIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLISLYLHDNTMPQLDTSTWLMMILSMF-LTLFIIFQLKISKHNFFH-NPEST-LTKAQKQ-NTP-W-ETKWTKIYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTTTNLEWLNGCPPPYHTFEEPTYINS-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEIETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFLTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYMFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSSNPTGITSDTDKIPFHPYYTIKDILGILLLILILMVLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILILMPLLHMSKQRSMMFRPLSQCLFWTLVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVMMPVASMIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSYTLSTLITTQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPYMPELYTINFIIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IISIIILSTIMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMYSGQW--TVMKLFNPMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVFYQIFPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILPYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKAPIMTALALTTLLSMGGLPPLSGFMPKWLIIQEMTKNNSIIMPTFMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFSNTKQMTLL-------PTMTVMSTLLLPLTPILSVLE---MN-LMLALLTNFTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLILLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTTHSLLISLSSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQYHLSKENLTRKKLFITMLILLQLFLIMTFTATELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYIQNTVGSLNFLMLQYWVQPMP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMFLNP-TTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNLFSSF-ALITLLLLTMPIMMT---NFNTYKT-INYPLYVKTT-ISYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLANLNTWDLQQIFMLNPE-NSNMPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSTMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGIPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPTTVPQMTMPYYLKMMALTVTILGFILALEINNLTQNLK--FNYPSNTFKFSNLLGYFPTIMHRLAPYLSLTMSQKSASSLLDLIWLENILPKTTSLIQMNMST--MITNQKGLIKLYFLS---FLITI--LISIILF----------NFHE---- +>Akodon_montensis_ +----MNENLFASFATPT-VMGLPIVIPIIMIPSMMITSSS-RILTNRLLTFQHWLIKIITKQMMMIHSAKGRTWSLMLLSLIIFIGTTNLLGLLPHTFTPTTQLSMNLGMAIPLWAGTVVLGFRHKTKSSLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLTS-INFPTALITFIILTMLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITVISSS-ITLFILMQLKISSQNFPP-NPSPK-LIQTTKF-KSP-W-ETAWTKIYSP-LS-LPQQ----MLINRWLFSTNHKDIGTLYLIFGAWAGMVGTALSILIRAELGQPGALMGDDQIYNVVVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGFTLNDTWAKTHFAIMFVGVNLTFFPQHFLGLAGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLLMIFMIWEALASKREVLYVEHTTTNLEWLHGCPPPYHTFEEPTFVKV-K--------MAYPMQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLSFDSYMVPTNELKPGDLRLLEVDNRIVLPMEMPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSSSLI----------MTHQTHAFHMVNPSPWPLTGALSALLLTSGLVIWFHYNSMTLVILGLLANSLTMFQWWRDVVREGTYQGHHTPIVQKGLRYGMILFIISEIFFFAGFFWAFYHSSLAPTHDLGGSWPPTGIIPLNPLDVPLLNTSVLLASGVSITWAHHSLMEGKRKNMNQALLITIILGAYFTLLQASEYLETPFSISDGIYGSTFFMATGFHGLHVIIGSTFLLICLIRQLNFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MKILRKNHPLLKIVNHSFIDLPTPSNISSWWNFGSLLGMCLVIQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWLIRYLHANGASMFFICLFIHVGRGIYYGSYVLSETWNIGIVLFLTTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGSTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAAFALVHLLFLHETGSNNPSGLNSDSDKIPFHPYYTTKDLLGIFLLLLVLMILALFFPDVLGDPDNFTPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAAFPLLNTSKQHGLIFRPVTQVIYWIFIANLLVLTWIGGQPVEYPFTTIGQIASITYFAIIIILIPVSNTIENNII---KL--------MY--------LINILSLLIPILIAMAFLTLLERKFLGYMQLRKGPNIVGPYGILQPFADAMKLFIKEPLRPLNTSATLFIMAPTLSLFLALSLWIPLPMPHPLLNLNMGMLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSALLMNGSFSLQSLIFTQEPLWLLIPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIIMMNALSATLFLGAFHNPQNPELFTMNFVIKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCIWHISLPLFSASV-A-PYI--MNI-LAMIIIYLTIFLGPMITMSSSNLFLMWVGLEMNLLAIIPLMISKHHPR-STEAASKYFITQATASMIFLLSIVLNFKQLGTW--TILPQTNYLTMLTIFISLAIKLGLAPFHSWLPEVTQGIQPHTGLILLTWQKLAPLSILYQFHNLIDPNILMLS-ATTSILVGAWNGLNQTQMRKIMAYSSIAHMGWMIAICSYNPNLTLLNLIVYMLLTTPLLLAINLYSSTSISSL---SLLWNKMPILLPTLSIILMSTGGLPPLTGFLPKWFIIYELLKNNSTVLALLMAMVALINLFFYTRIIYSTALTTFPSNNNSKLIS-QLPTKNTNIMF-------PITATLSTLTLPLTTLLVS-----MN-MILTLLINITLSLCLISIAFWLPQLNAYTEKASPYECGFDPISSARLPFSMKFFLVGITFLLFDLEIALLLPLPWAIHSTNSYLTMTVSFTLVSALALGLAYEWLNKG--LEWTE-MTPTTLNILLAFLFSLLGTLIFRSHFMSTLLCLEGMMLSLFIMTTITALTAQSMIMYTIPIVMLVFAACEAALGLALLTMISSTYGTDHVQNLNLLQCMLKILFPSLMLLPLTWLSSNKKLWVNVTSYSFLINLVAL-TSLWQNNEN-LNFS-SLFFTDYLSTPLLILTTWLLPLMLIASQYHMKKETEQNKKVFVSLLISLQILLIATFSVNEMILFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALTWIQNSMGSLNITLLTINPQSMF-PLW-----SSDILWLACMLAFLVKMPMYGIHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDP-TTKTMASPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAIMIQTPWSFMGATALMIAHGFTSSLLFCLANTNYERIHSRTMIMARGLQTVFPLMATWWILASLANLAIPPSINFIGELLITLSLFSWANTSIILTGLNILITSLYSMYMFIMTQRGKMTNHMLNLQPSQTRELTLMALHLIPLLFLILNPKLILGPTL------MNLITPS-IMLIFLLLITPVFLS---SLTTNKN-INFPNYVTLS-IKFSFIISLIPLTLFLYHDIEMMVSNYHWMTINTIKIYTSFKLDFFCIIFMPVALFVTWSIMEFSSWYMHADPHLNRFMKYLLLFLITMIILTSANNLLQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAILYNRIGDIGLILSMAWFCLNSNSWDLQQIFTI-NH-SNTLPLAGLLIAATGKSAQFMLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLMIRFYPLTSNNPTILTAMLCLGAMTTLFSAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPHLAFLHICTHAFFKAMLFMCSGAIIHNLADEQDIRKMGNLFKTMPFTSSCLIIGSLALTGTPFLTGFYSKDLIIEAANTCYTNAWALTVTLFATS-LTAVYSMRIIYFSLMTKPRFPPLLIMNENNPQLINPIKRLAYGSILAGFLLSQNIPPSNIQVMTMPLYLKTTAIMVTIAGFITALELNKLTNNLT--PVKPSSSLLFSSSLGYFPTIIHRLMPIKFLNSSYNTSLNLMDLIWLEKALPKTITTINTLTSK--TLSNQKGLIKLYFLS---FLITL--LCLPFLVLI---------------- +>Pudu_mephistophiles_northern_pudu +----MNENLFASFITPM-ILGLPLATLIIIFPSLLFPTSN-RLVNNRLISLQQWMIQLVSKQMMGIHNVKGQTWTLMLMSLIMFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPLWAGTVIMGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTMALTTFIILVLLTVLEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFMMIMSMF-MTLFIIFQLKISKHSFFF-NPEPM-LTGMQKQ-ITP-W-EMKWTKIYLP-LS-LLQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVELTTTNLEWLNGCPPPYHTFEEPTYINL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLGYFEKWSTSLL----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDSDKIPFHPYYTIKDILGILLLILFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPLFHMSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFITIGQLASILYFLIILVLMPVISTIENNLL---KWT-------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLMMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IISILILSTMMLGTIIVMISSHWLFVWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPVASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYVIMTSTMFMLFMANSTTTTLSL---SHMWNKMPVMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNNNLILPIFMAITALLNLYFYMRLTYSTTLTMFPSMNNMKMKW-QFSTMKQMTLL-------PTMVVLSTMLLPLTPILSVLE---MN-LIMALLTNFMLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWACQTNNLSTMLTMALFLILLLAMSLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNSYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSMPLLILTMWLLPLMLMASQHHLSKETLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNIIGSLNFLILQYWMQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGAMALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNLLSSF-MLITLLLLVIPIMTT---SSNIYKT-YNYPLYVKTA-ISYAFITSMIPTMMFIHTGQETIISNWHWLTIQTIKLSMSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLINLNTWDFQQIFMLNPN-NSNMPMMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSTLLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIAINENNPFLTNSIKRLMIGSLFAGFIISNNIPPTTIPQMTMPPYLKMMALMVTILGFILALEISNMTQNLK--FNYPSNAFKFSNMLGYFPTIIHRLTPYMNLTMSQKSASSLLDLIWLENILPKTTSLMQMKMSI--MVTSQKGLIKLYFLS---FLITI--TISMILL----------NFHE---- +>Przewalskium_albirostris_white-lipped_deer +----MNENLFASFIAPM-ILGLPLATLIVMFPSLLFPTSN-RLVNNRLISLQQWMLQLVSKQMMGIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGAALALMS-ISTTMALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LALFIIFQLKISKHNFHF-NPELT-LTKTQKQ-DNP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSPNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAVWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGILLMVLFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILIFMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIIIGQLASILYFFIILVLMPITSTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPVLPELYTINFIMKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFMSSI-P-PQT--MNP-IIFILILSTMMMGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEAATKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMFMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLDMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTILVLITLLSMGGLPPLSGFMPKWMIIQELTKNDSLILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSVLE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVALAGLLMYRSHLMSSLLCLEGMMLSLFVMASLTILNSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNITGSLNFLVLQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMVAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-TLVTLLLLTIPIMTT---SSDNYKT-SNYPLYVKTT-ISCAFITSMIPTMMFIHTGQEMVISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLNPN-DSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTIPQLTMPYYLKMMALTVTILGFILALEISNMTQNLK--FNYSTNIFKFSNMLGYFPTIMHRLAPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQTKMSI--MVTNQKGLIKLYFLS---FLVTI--TVSMILF----------NFHE---- +>Tupaia_belangeri_northern_tree_shrew +----MNENLFASFITPT-LMGLPIVVLIIAFPSILFPTTS-RLVSNRLVAIQQWVVKLIMKQMMAMHNTKGRTWALMLTSLIIFIGSTNLLGLLPHSFTPTTQLSMNLGMAVPLWAGAVILGFRHKPKSSLAHFLPQGTPVPLIPMLIMIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTS-ISTPTAMLTFIILVLLTVLEFAVALIQAYVFTLLVSLYLHDNSMPQLDTSTWFITIVSML-ATLFILFQLKLSSYCYYN-LPQTK-TMKTKKQ-DTP-W-NQKWTKTYLP-LS-LPRH----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLDQTWAKIHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTAWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVSSVELTTTNLEWLHGCPPPYHTFEEPAYVKP----------MAYPLQLGFQDASSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEELCFDSYMIPTSDLKPGDIRLLEVDNRVVLPMEVPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLISTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWTTTML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLVMWFHFNSFILLALGLTTNTLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKDMMQALFITIALGAYFTALQASEYFETTFTISDGVYGSTFFMATGFHGLHVIIGSTFLLVCFIRQMKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MANMRKNHPLLKIINHSFIDLPAPSNISSWWNFGSLLGMCLVLQIATGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYMYLETWNIGVILLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHETGSSNPLGIDSDADKIPFHPYYTIKDILGVVVLLAVLSGLVLFSPDLLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALAMSILILLFVPFLHTSKQRSMTFRPISQCLFWILVADLITLTWIGGQPVEHPFILIGQVASVLYFAIIIILMPLAGWLENYLM---KW--------MF--------LINLLLLILPVILAMAFLTLVERKVLGYMQLRKGPNVVGPFGLLQPFADAMKLFIKEPLRPLTSSSMLFVTAPILALSLALSMWIPMPMPHPLINLNMGILFILAMSSLGVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLCVLLMSGSFTLSTLITTQEYMWLIIPTWPLAMMWFISTLAETNRAPFDLAEGESELVSGFNVEYAAGPFALFFMAEYMNIIMMNALTTTIFLGPFHDNLMPELYTINFTVKTLLLTIVFLWIRASYPRFRYDQLMHLLWKSFLPLTLAMCMLYVSMPISLSSI-P-PQT--MNP-LITLAITMTILSGTLITMVSSHWLMAWMGVEMNMLAFIPILMKKPTPR-STEAAVKYFITQATASMILMLAILINAMYSGQW--TISKVSNTPASLLMTIALLMKLGLAPFHFWVPEVTQGIPLKSGMILLTWQKLAPMCILCQITTSLDTKLTTLT-ALASILVGGWGGLNQTQLRKIMAYSSIAHMGWMIAILPYSITATILNLVIYILTTTAVFMILSLNNTTTTLSL---SQLWNSTPFLTTMLMVLLLSLGGLPPLTGFLPKWIIIQEMTKNDSVILPTLMAMMALLNLYFYMRLIYSSTLTMFPSPNNSKMKV-KFDNKKGMFFL-------PTLITLTTMTLPLGPMMSNLF---MN-LILALVINTSLAALLVTIAFWLPQLNVYMEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQSNYPTTMLTMALLLISILALGLAYEWLQKG--LEWAE-MPSIYVNIMLAFATSLLGLLLFRSHLMSALLCLEGMMLSLFVLSSILVLNNHLILTAMLPIILLVFAACEAAVGLALLVMVSNTYGLDYVQNLNLLQCMLKIILPTAMLLPLTWLSKNNMIWINTTIHSLLISLISL-SMLNQMTDTGLIFS-LNFFSDSLSAPLLILTTWLLPLMIMASQNHLSKESPARKKLYISMLVLLQFFLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLIALVYMQNVMGSLNFPLITLTHKSLP-PSW-----SNDLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISIILEP-MTKSMAYPFLILSMWGMIMTS--AICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSYMGATMLMVAHGLTSSVMFCLANSNYERVHSRTMFLARGLQTILPLMALWWLLASLSNLALPPTINLMGEILIVLSSFSWSNMTIILMGLNMLITALYSLYMLITTQRGKFTYHINNIKPSFTRENSLMLMHLLPLFLLMLKPSIIMGPTL------MNAFSPL-IMTTMIILTMPMVAA---LTKTYKS-PSYPHYVKTA-VLYAFMTSLVPTMMFIHSGQETLISNWHWITLHTLKLSLNFKLDYFSVMFIPVALFVTWSIMEFSMWYMHSDPNINRFFLYLLTFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYSRSDANTAALQAILYNRIGDIGFILAMAWFTINLNTWDLQQIFMLDNK-TTLIPLLGLVIAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLVRFYPLLEHNKTIQTIILCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTLPFTSSALLIGSLALTGTPFLTGFYSKDLIIESANTSYINAWALLMTLVATS-LTAVYSTRIIFYALMGQPRFPPTITINENNSPLINSIKRLAMGSIFAGFIISMNITPTATPQMTMPLYMKLTALVVTITGFLIATELNSMTLYLK--HKHPSQLHNFSTMLGYYPTIMHRLLPYSCLKSGQTLSSTLLDMTWLEMALPKSIANTQLMASM--KISNQKGQIKMYFMS---FLISL--IVVILII----------T------- +>Elephas_maximus_Asiatic_elephant +----MNEELSAFFDVPV-----GTMMLAIAFPAILLPTPN-RLITNRWITIQQWLIQLIMKQLLSIHNMKGLSWSLMLITLTLFIGLTNLLGLLPYSFAPTTQLTVNLSMAIPLWTGTVVLGFRYKTKISLAHLLPQGTPTFLIPMIIIIETISLLIRPITLAVRLTANITAGHLLIHLTGSAALTLLS-VHLMTITVTFITVVMLTILELAVALIQAYVFALLISLYLHESAMERMDIIIWLLAVVIVL-TTLMIFLHLKTLKIIRLL-FPISK-ELSKKSC-VFP-W-KKKWTKNYPP-SSMYP------MFANRWLYSTNHKDIGTLYLLFGAWAGMVGTAFSILIRAELGQPGSLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGTGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILSAINFITTIINMKPPAMSQYHMPLFVWSILVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMVSHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLNYTWAKIQFLVMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTAWNTASSMGSFISLVAVILMVFMIWEAFASKREVSMMELMTTNVEWLNGCPPPHHTFEEPAYVKS-NS-------MAYPLQLGFQDATSPVMEELLHFHDHTLMIIFLISSLVLYIIMLMLTTKLIHTNMMNVQEMEMIWTILPAIILILIALPSLHTLYMMDEINNPLLTIKTMGHQWFWSYEYTDYEDLAFDSYMITTDSLKFGELRLLEVDNRMVLPTDLPVRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQVTLTSMRPGLFYGQCSEICGANHSFMPIVLELVPLKYFESWSASLA----------MTHQMHAYHMVDPSPWPLTGALSALLMTSGLTMWFHYHSVILLLLGLTTNILTMFQWWRDVVREGTFQGHHTPIVQESLRYGMILFITSEVLFFTGFFWAFYHSSLAPTPELGSYWPPVGVYPLNPLEVPLLNTSVLLASGVTITWAHHSLMEGSRKNMLQALLITILLGVYFTLLQMFEYYEASFTISDGIYGSTFFVTTGFHGLHVIIGSTFLLICFIRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYLSIYWWGS--MTHTRKSHPLFKIINKSFIDLPTPSNISTWWNFGSLLGACLITQILTGLFLAMHYTPDTMTAFSSMSHICRDVNYGWIIRQLHSNGASIFFLCLYTHIGRNIYYGSYLYSETWNTGIMLLLITMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGTNLVEWIWGGFSVDKATLNRFFAFHFILPFTMVALAGVHLTFLHETGSNNPLGLTSNSDKIPFHPYYTIKDFLGLLILILLLLLLALLSPDMLGDPDNYMPADPLNTPLHIKPEWYFLFAYAILRSVPNKLGGVLALFLSILILGLMPFLHTSKHRSMMLRPLSQVLFWTLTMDLLTLTWIGSQPVEYPYTIIGQMASILYFSIILAFLPIAGMIENYLI---K---------MF--------LINVLTVTLPILPAVAFLTLVERKALGYMQLRKGPNVVGPYGLLQPIADAIKLFTKEPIYPQTSSKFLFTVAPILALTLALTVWAPLPMPYPLINLNLSLLFILAMSSLMVYSILWSGWASNSKYALMGALRAVAQTISYEVSMTTITLSMVLMNGSFTLTAFATTQEHLWLIFPMWPLMMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFMAEYANIIMMNALTVILFMGTSCDPQMPEISTINFVMKTIILTICFLWVRASYPRFRYDQLMYLLWKNFLPLTLALCMWHISILISLACI-P-PQA--MNP-LALSLILTTLFTGTLITMMSSHWLTAWMGLEMNMLTMIPILMKTTNPR-STEAATKYFMTQATASMMLMMALTINLMYSGQW--SITKMTNPVASNVALMALMTKLGSAPFHFWVPEVTQGVELTPGMILLTWQKLAPLSLLYQMATYTNTNLIYLS-GLLSILIGGWGGLNQTQLRKILAYSSISHMGWMLIILPFNPTLTLLNLAIYILLTLSIFMILANTFTTSMSSL---TLMWNKTPAMTIMLMTTLLSLGGLPPLSGFTPKWLMIHELTKNNSIIMPLTMAIMTLLNMYFYTRLIYYSSLTILPSTNNMKMTW-QFTNTKHTMML-------PTLITLSNMLLPLTPMISMLE---MN-LMTTLLTNTMLTSLMVLIAFWLPQTYTYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQANNTNLTLLMSFMLIILLAIGLAYEWLQKG--LEWTK-MPYIYMNITLAFVISLIGTLMYRSHLMSSLLCLEGMLLSLFTLNALLSLNMNFTLSTMVPLILLVFAACEAAVGLALLVMISNTYGLDYVQNLNLLQCMLKTILPTIMLIPLAWFTSNNMVWINTTLYSFAISLASL-HLLHQPLDNSLNLS-PEFFLDSLSTPLLILTIWLLPLMLIASQAHLSSGSTFQKKSYITTIILLQVSLIMTFAATDLILLYIMFEATLIPTMIIITRWGNQLERLNAGSYFLFYTLMGSLPLLVTLMLIQNTLGSLNLMMLPYLTKSID-NLW-----STNMLWLTCTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITILLDP-LTMHMYYPFLMLSLWGMVMTS--SICLRQTDMKSLIAYSSVSHMALVIIAIMLQTPWSFMGALTLMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLINMAPPPTINLIGELLIITTSFSWSNLTIFPMGLNVLITTMYTLHMMTTTQRGKTSHHAKSIKPSFTRENTLMALHLLPLLLLSLNPKIILGLMY------MNLIPTL-TLTSLIILTLPITMT---LLQNNKT-NCFLYITKMA-VTCAFAISLIPTLLFLQSNQEAYISNWHWMTIQTLKLSLSFKLDFFSLTFMPIALFITWSIMEFSLWYMHSDPHINRFFKYLLLFLITMLILVSANNLLQLFMGWEGVGIMSFLLISWWHGRTDANTAALQAMLYNRIGDMGFIMMMAWFIIHLNSWEFQQIFLTNPK-NTTLPLLGLLLASAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVMAGVFTLIRFYPLMENNLTIQTSTLCLGAITTLFTAICALTQNDIKKIIALSTSSQLG--LMMVTIGINQPHLAFTHMCTHAFFKAMLFLSSGSIIHNLDNEQDIRKMGGLYKTMPITSTAIIIGSLALTGMPFLTGFYSKDPIIETANMSYINTWALLITLIAVS-MTASYSTRIIFFALLGQPRYPTLIQVNENNPYLINPIKRLILGSIFMGFFISMNTIPHTTPQMTMPPHLKFMALAVTLLGFTVATELNNMTHNLT--FKQPSRMHTFSTTLGYYPTTTHRILPYLSLTMSQNLATTIMDSIWLEKMIPKNLTTMQKTAAS--LVSNQKGLMKLYFLS---FLLSI--TLGLLITL----------------- +>Loxodonta_africana_African_savanna_elephant +----MNEELSTFFYVPV-----GTMMLAIAFPAILLPTPN-RLITNRWITIQQWLIQLIMKQLLSIHNTKGLSWSLMLITLTLFIGLTNLLGLLPYSFAPTTQLTVNLSMAIPLWTGTVVPGFRYKTKISLAHLLPQGTPMFLIPMIIIIETISLLIRPVTLAVRLTANITAGHSLIHLTGTATLTLSS-IHSMTITVTFVTVILLTILELAVALIQAYVFALLISLYLHENAMERMDIIIWLLAVVIVL-TTLMIFLHLKTLKIIRLL-FPISK-ELSKKSC-VFP-W-KKKWTKNYPP-SSMYP------MFANRWLYSTNHKDIGTLYLLFGAWAGMVGTAFSILIRAELGQPGSLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILSAINFITTIINMKPPAMSQYHMPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMVSHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLNYTWAKIQFLVMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTAWNTASSMGSFISLVAVILMVFMIWEAFASKREVSVMELTTTNVEWLNGCPPPHHTFEEPAYVKS-NS-------MAYPLQLGFQDATSPVMEELLHFHDHTLMIIFLISSLVLYIIMLMLTSKLVHTNMMNVQEMEMIWTILPAIILILIALPSLHTLYMMDEINNPLLTIKTMGHQWFWSYEYTDYEDLAFDSYMITTDSLKFGELRLLEVDNRMVLPTDLPVRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQVTLTSMRPGLFYGQCSEICGANHSFMPIVLELVPLKYFENWSASLAQ---------MTHQTHAYHMVDPSPWPLTGALSALLMTSGLTMWFHYHSVTLLLLGLTTNILTMFQWWRDVVREGTFQGHHTPVVQESLRYGMILFITSEVLFFTGFFWAFYHSSLAPTPELGSYWPPVGVYPLNPLEVPLLNTSVLLASGVTITWAHHSLMEGNRKNMLQALLITILLGVYFTLLQMFEYYEASFTISDGIYGSTFFVTTGFHGLHVIIGSTFLLTCFIRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYLSIYWWGS--MTHIRKSHPLLKIINKSFIDLPTPSNISTWWNFGSLLGACLITQILTGLFLAMHYTPDTMTAFSSMSHICRDVNYGWIIRQLHSNGASIFFLCLYTHIGRNIYYGSYLYSETWNTGIMLLLITMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGTNLVEWIWGGFSVDKATLNRFFALHFILPFTMIALAGVHLTFLHETGSNNPLGLTSDSDKIPFHPYYTIKDFLGLLILILLLLLLALLSPDMLGDPDNYMPADPLNTPLHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILGLMPLLHTSKHRSMMLRPLSQVLFWTLTMDLLTLTWIGSQPVEYPYIIIGQMASILYFSIILAFLPIAGVIENYLI---K---------MF--------LINVLTVTLPILLAVAFLTLVERKALGYMQLRKGPNVVGPYGLLQPIADAIKLFTKEPIYPQTSSKFLFTVAPILALTLALTVWAPLPMPYPLINLNLSLLFILAMSSLMVYSILWSGWASNSKYALMGALRAVAQTISYEVSMTTITLSMVLMNGSFTLTAFAMTQEHLWLILPMWPLMMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFMAEYANIIMMNALTVILFMGTSYDPQMPEISTINFVMKTIILTICFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISVLISLACI-P-PQA--MNP-LALSLILTTLLAGTLITMMSSHWLTAWMGLEMNMLTMIPILMKTTNPR-STEAATKYFMTQAMASMMLMMALTINLMYSGQW--SITKMTNPVASNMALMALMTKLGSAPFHFWVPEVTQGVELTPGMILLTWQKLAPLSLLYQMATYTNTNLIYLS-GLLSILIGGWGGLNQTQLRKILAYSSISHMGWMLIILPFNPTLTLLNLTIYIMLTLSIFMILTNTFTTSMSSL---TLMWNKTPAMTIMLMTTLLSLGGLPPLSGFMPKWLMIHELTKNNSIIMPLTMAIMALLNMYFYMRLIYYSSLTILPSTNNMKMTW-RFTNTKHTMTL-------PTLITLSNMLLPLTPMISMLE--MIN-LMITLLTNTMLTSLMVLIAFWLPQTYNYSEKTSPYECGFDPVGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQANNTSLTLLMSFMLIILLAIGLAYEWLQKG--LEWTKYMPYIYMNITLAFVISLIGTLMYRSHLMSSLLCLEGMMLSLFTLNALLSLNMNFTLSTTVPLILLVFAACEAAVGLALLVMISNTYGLDYVQNLNLLQCMLKTILPTIMLIPLAWFTSNNMVWINTTLYSFAISLTSL-HLLYQPLDNSLNLS-PEFFLDSLSTPLLILTIWLLPLMLIASQSHLSSGSTFQKKSYITTIILLQVSLIMTFAATDLILLYIMFETTLIPTMVIITRWGNQLERLNAGSYFLFYTLMGSLPLLVTLMLIQNTLGSLNLMMLPYLIKPID-NLW-----STNMLWLTCTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITILLDP-LTTHMYYPFLMLSLWGMVMSS--SICLRQTDMKSLIAYSSVSHMALVIIAIMLQTPWSFMGALTLMIAHGLTSSMLFCLANSNYERIHNRTMILARGLQTLLPLMATWWLLASLINMAPPPTINLIGELLIITTSFSWSNLTIFPMGLNVLITTMYTLHMMTTTQRGKTSHHAKSIKPSFTRENTLMALHFLPLLLLSLNPKIILGLTY---MKVINLIPTL-MLTSLIILTLPIITT---LLQNNKT-NCFLYITKTA-VTYAFAISLIPTLLFIQSNQEAYISNWHWMTIHTLKLSMSFKLDFFSLTFMPIALFITWSIMEFSLWYMHSDPHINRFFKYLLLFLITMLILVSANNLLQLFMGWEGVGIMSFLLISWWHGRTDANTAALQAMLYNRIGDMGFIMMMAWFTIHLNSWEFQQIFLTNPK-NTTLPLLGLLLASAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVMAGVFTLIRFYPLMENNLTIQTSTLCLGAITTLFTAICALTQNDIKKIIALSTSSQLG--LMMVTIGINQPQLAFIHMCTHAFFKAMLFLSSGSIIHNLNNEQDIRKMGGLYKTMPITSTAIIIGSLALTGMPFLTGFYSKDPIIETANMSYINTWALLITLIAVS-MTASYSTRIIFFALLGQPRYPPLTQVNENNPYLVNPIKRLILGSIFMGFLISMNTIPHTTPQMTMPPHLKFMALAVTLLGFTVATELNNMTHNLM--FKQPSRMHTFSTMLGYYPTTTHRVLPYPSLTMSQNLATTIMDSIWLEKMIPKNLTTMQKTAAS--LVSNQKGLMKLYFLS---FLLSI--TLGLLIAL----------------- +>Cervus_nippon_yesoensis_Hokkaido_sika_deer +----MNENLFTSFITPM-ILGLPLATLIVMFPSLLFPTSN-RLVNNRLISLQQWMLQLVSKQMMGIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKTSLAHFLPQGTPTPLIPMLVVIETISLFIQPIALAVRLTANITAGHLLIHLIGGAALALMS-ISTTMALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LTLFIIFQLKISKHNFHF-NPELM-STKTQKQ-NTP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLCGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPSLTVKAMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKSLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGILLLVLFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIIIGQLASVLYFFIILVLMPITSTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPVLPELYTINFIMKSLLLTTSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFTSSI-P-PQT--MNP-AIFILILLTMMMGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEAATKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMFMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTILVLITLLSMGGLPPLSGFVPKWMIIQELTKNDSLILPTIMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSILE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMASARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVALAGLLMYRSHLMSSLLCLEGMMLSLFVMASLTILNSHFTLGSMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFNDNSLNFS-LMFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNITGSLNFLVLQYWVQPLS-NSW-----SNVFMWLSCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGSLY------MNLFSSF-TLVTLLLLTIPIMTT---SSDNYKT-SNYPLYVKTT-ISYAFITSMIPTMMFIYTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFALTPN-NSNTPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLMATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTIPQLTMPYYLKMMALTVTILSFILALEISNMTQNLK--FNYSTNIFKFSNMLGYFPTIMHRLAPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQTKMSI--MVTNQKGLIKLYFLS---FLVTI--TISMVLF----------NFHE---- +>Capra_falconeri_markhor +----MNENLFTSFITPM-VLGLPLVTLIILFPSLLFPSPN-RLINNRLISLQQWALQLASKQMMSIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTX-IXPTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTILSMF-LALFIIFQLKISKYNFYH-NPE-S-AAKVLKH-ITP-W-ETKWTKIYLP-LL-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMVPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFSSTVLLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIMLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGAMLLILVLMLLVLFTPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPFLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVMMPAASTIENNLL---KW--------MF--------MINILTFIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINFIIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILMTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVTKLFHPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILPYNPTMMLLNLIIYIIMTSTMFLLFMANSTTTTLSL---SHTWNKMPIMTTLVLITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFSTTKRMTLL-------PTLTVLSTMLLPLTPILSILE---MN-LMITLLTNFTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNSMIWINSTLHSLLISFTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLLKENPTRKKLFISMLVLLQLFLIMTFTATELIFFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIHIQNMVGSLNFLILQYWAQPVP-NSW-----SNVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITLLLNP-ITDYMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKHTHHINNILPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSL-ALTTLTLLTAPIMVA---NLNIYKS-TNYPLYVKTV-VSCAFITSMIPTMMFIYTGQEMVISNWHWLSIQTLKLSLSFKMDYFSVMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILTMAWFLINLNTWDLQQIFMLKPE-DSNLPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAVYSTRIIFFALLGQPRFPALININENNPFLINSIKRLLIGSLFAGFIISNNIPPMTIPQITMPHYLKMTALAVTTLGFILALETANMTHHLK--FNYSSNMFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLETILPKTISQAQMKMAT--TTTNQKGLIKLYFLS---FLVTI--LVSMILF----------NFHE---- +>Wiedomys_cerradensis_cerrado_red-nosed_mouse +----MNENLFASFITPT-MMGLPIVVLIIMFPSMFMLTSK-RVLTNRLVALQLWLTKLTLKQMMMTHSMKARTWSLMLISLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGTVILGFRHKTKASLAHFLPQGTPIALIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTS-ISMTVASISFIILILLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITAISTS-ITLFMIMQLKICSQNFSI-APATK-NISLIKA-SNP-W-EQAWTKIYLP-LS-LPQQ----MLINRWLFSTNHKDIGTLYLIFGAWAGMVGTALSILIRAELGQPGALMGDDQIYNVVVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGPSVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLNDVWAKTHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNMVSSMGSFISLTAVLLMIFMIWEALASKREVAHVDLTSTNLEWLHGCPPPYHTFEEPAFVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTNELKPGDLRLLEVDNRVVIPMEVSIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEVVPLKNFENWSVSMI----------MTHQTHAFHMVNPSPWPLTGALSALLLTSGLVIWFHHGSYNLMMLGLMTNLLTVYQWWRDVVREGTYQGHHTPVVQKGLRYGMILFIISEIFFFAGFFWAFYHSSLAPVHDLGGSWPPTGIIPLNPLDVPLLNTSVLLASGVSITWAHHSLMEGKRKNMNQALFITIMLGLYFTLLQASEYMETSFSISDGIYGSTFFMATGFHGLHVIIGSSFLLICLIRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTIMRKTHPLLKIVNHSFIDLPTPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFIHVGRGIYYGSYMLSETWNIGIILLLTTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVLVHLLFLHETGSNNPSGLNSNSDKIPFHPYYTIKDLLGVLLLLMVLMILVLFFPDALGDPDNYTPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAAFPLLNSSKQQGYIYRPITQLLYWIFISNILILTWIGGQPVEYPFTYIGQISSIMYFMIIVILMPIANMIENDIL---KLHY------MY--------IINIMTLLVPILIAMAFLTLVERKFLGYMQLRKGPNIIGPYGTFQPFADAMKLFIKEPLRPLNISTTLFIIAPTLSLFLALSLWIPLPMPHPLINLNMGVLFILIMSSLAVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSALLINGSFSLQSLIYTQEPLWLLVSTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIIMMNALSTILFMAPLNNPQHPELFTLSFIMKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPMFSASI-P-PYT--MNS-TAMLLIYLTILMGPLIVLFSNNLFLMWIGLEMNLLAMIPIMISQHHMR-ATEAASKYFITQATASMLLLLSIMLNFKQLGLW--IIQPQTNYFITLTMFISLAMKLGLAPFHSWLPEVTQGIQLNIGLLLLTWQKLAPLSMLYQIYEYLDHSILMMS-AMISIFIGAWNGLNQTQVRKIMAYSSISHMGWMISICPYNPNLTMLNYFIYTLLTISMFLMISIYSTMNINSM---SLLWNKMPTLMPIMSAILMSMGGLPPLTGFLPKWLIISELSNNNCTIMATLMAMMALINLFFYMRIIYSTSLTVFPTNNNSKMLM-NLMTKNTNPIL-------PMFIVLSTMTLPLSPLLQ------MN-LVLTLSINMVLSLSLIFIAFWLPHINFYTEKASPYECGFDPMSSARLPFSMKFFLVGITFLLFDLEIALLLPLPWAIQSSDIYFVMMVSFILVTILSLGLAYEWINKG--LEWTE-MPLTTINILLAFLLSFMGTLIFRSHLMSSLLCLEGMMLSLFIFMAITALTANSMIMYTIPIVMLVFAACEAAIGLALLAMISKSYGTDYVQNLNLLQCMLKIIVPSMMLLPLTWFSNNKNLWTNVISYSFLINLISL-ISLWHNNEG-LYFS-PMFFTDYLSSPLLVLTTWLLPLMLIASQNHMKKETEFNKKLFVSMLISLQILLTITFSANDLIMFYILFEATLIPTLIIVTRWGNQTERLNAGLYFLFYTLIGSIPLLIALIWLQNSLGTLNILMLTLNPQPLS-LSW-----SNNILWLACMMAFLVKMPMYGIHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRISLMLDP-ATKSMASPFILLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIAAIMIQTPWSFMGATTLMIAHGLTSSMLFCLANTNYERIHSRTMIMVRGLQTIFPLMATYWLLASLANLALPPSINLMGELMIITSLFSWTNTSIILTGLNIIITSLYSMYMIISTQRGKLTYHATNLQPPQTRELTLMALHVLPLLLLILNPKLIMGCTL------MNLIVSS-TMLILFLLATPALLC---LFNFNKN-TNFPTYVTLS-IKYSFMISLVPLISFIYSNTDTMIANYHWITINTIKISTSFKFDFFCIFFMPVALFVTWSIMEFSSWYMHSDPHINRFIKYLLLFLISMIILTSANNLFQLFIGWEGVGIMSFLLISWWHGRSDANTAALQAIIYNRIGDVGFIMAMTWFCLNMNSWELQQIFMN-TD-LSNIPLAGLLIAATGKSAQFILHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMISNSPAILTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLMDEQDIRKMGNMSKIMPFTTSCLMIGSLALTGMPFLTGFYSKDLIIEAANTCYTNAWALLITLFATS-LTAVYSMRIIYFSLMSKPRFLPLLSINENKPQLMNPIKRLAYGSIMAGYIISHNIPITSTQTMTMPLHLKTTAILVTLAGFITALELNKFTNNFI--FNKMSPSYTFSTSLGYYPTTTHRLIPTLLLKTSSNTALNLMDLFWLEKAIPNTITNIHYLSSK--TLSNQKGLIKLYFLS---FLITL--LCLPLFMFI--------YYLE---- +>Lepus_townsendii_white-tailed_jackrabbit +----MNENLFSSFITPT-MMGLPIVILIIMFPTLLFPAPT-RLINNRLVSAQQWLAQLILKQMMMMHSPKGRTWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGAALALIS-ISPTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLVTIIAMI-LTLFAMIQLKFHKYSYPL-SPTPK-TFKSTSF-PTP-W-ETKWTKIYSP-LL-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDQTWAKIHFTVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMVMIFMIWEAFASKREVETVELTTTNLEWLHGCPPPYHTFEEPAYVKA----------MAYPFQLGFQDASSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLNPGDLRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLISTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSLSMI----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSPSLLLIGLLTNTLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIKPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMQQALAITILLGIYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCLLRQLHFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNHSLIDLPAPSNISAWWNFGSLLGLCLMIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWLIRYLHANGASMFFICLYMHVGRGIYYGSYTYLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMIHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDLLGFLVLILLLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIIPFLHMSKQRSMMFRPISQVLFWILVADLLTLTWIGGQPVEHPFITIGQVASILYFSIILILMPLASLIENKIL---KW--------MF--------LINTFLLILPVLLAMAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLRPLTSSSLLFIIAPTLALTLALSMWLPIPMPYPLINLNMGVLFILATSSLAVYSILWSGWASNSKYALFGALRAVAQTISYEVTLAIILLCVLLMNGSFTLSSLITTQEYMWILFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNIIMMNALTAILFLGSFHSHTNPEMFTINFAAKTLLLTMTFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWYISMPIMLSSI-P-PHM--MNP-LIFSIILLTLFLGTMITMFSSHWLTMWIGLEMNMLAIIPILINKATPR-STEAATKYFLTQATASMILMMAITLNILDSGQW--TLINPQNNFTPIMIMLALIIKLGMAPFHFWVPEVTQGVPLKSGLILLTWQKLAPLSILYQISPSIDSTMMMLV-AILSIMVGGWGGLNQTQLRKILAYSSIAHMGWMAAIITFNPNTMILNLIIYILLTIPMFMMFIQYTNTTTLSL---SQMWNKTPLMVTAILITLMSLGGLPPLTGFIPKWIIIQELTKNGNIIMPTMMAMLALLNLYFYLRLIYSSSLTMFPTTNNLKMKW-QFEPMKRMTFM-------APLIILSTMFLPLTPMLSVLN---MN-LILVLLINMSISLILVTIAFWLPQLNIYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAAQFNNLNLVLIMALMLISILALGLAYEWIQKG--LEWVE-MPSIYINIFLAFIFALLGMLVYRSHLMSSLLCLEGMMLSLFILITLTALNMHYTLSFMFPIVLLVFAACEAAIGLALLVMVSNTYGMDYVQNLNLLQCMLKTIIPTIMLIPTVWWSKNHMIWINATIYSLLISLTTF-LLLNQPNDTNLNLS-TTFFSDALSTPLLMLTVWLLPLMILASQHHLNKESLLRKKTYISLLISLQIFLVMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGNYFLFYTLMGSLPLLVALIHLQNSMGSLNFLLIQLSNESLP-TSW-----SNSLMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITILLNP-ITEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTILPLMAAWWLLASLTNLALPPSINLLGELLIVMASFSWSNLTIILMGTNVLITALYSLYMLSTTQRGKFTYHTNNISPTFTRENTLMMLHLAPLLLLSINPKIILGPML------MNLFSTS-MAVSIIILVLPIMAS---FTNIFNH-NSYPYYVKTS-VSYAFMISLIPTLIFIISNQETMVSNWHWMTIHTLKLMTSFKLDYFSMLFTPIALFVTWSIMEFSMWYMHSDPKINQFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFIMAMAWFAINLNTWEFQQMFMSDNN-ITILPLIGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLLENNKTAQTLILCLGAITTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKTLPFTSSALTIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALIITLIATS-LTAVYSTRIIFFALLGQPRYPTLIIINENNPSLINSIKRLALGSIFAGFLISNLVTPNNIPQMTMPLYMKLTALFVTILGFSIAMELNQLSLHLK--MSTQSNSFNFSNMLGFFPATMHRLLPYINLSASQNVATLLLDMTWTEKAIPKNISDIQILAST--SVSSQKGLIKFYSLS---FLISM--LLALFILA----------------- +>Rucervus_duvaucelii_barasingha +----MNENLFASFITPM-ILGLPLATLIVMFPSLLFPTSN-RLVNNRFISLQQWMLQLVSKQMMGIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVATGFRNKTKASLAHFLPQGTPTPLIPMLVVIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMN-ISTTMALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMILSMF-LALFIIFQLKISKHNFHF-NPELT-LTKTQKQ-DTP-W-ETKWTKIYLP-LL-LPQ-----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSIVELTTTNLEWLNGCPPPYHTFEEPTYINL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGILLLILFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPLLHTSKQRSMMFRPFSQCLFWVLVADLLTLTWIGGQPVEYPFIIIGQLASILYFFIILVLMPITSTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGASHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFMSSI-P-PQT--MNP-IIFILILSTMMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTVLILITLLSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSILD---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVALAGLLMYRSHLMSSLLCLEGMMLSLFVMASLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIVPTMMLMPLTWLSKGNMIWINSTAHSLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENITRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNITGTLNFLVLQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-TLATLLLLIIPIMAT---SSSNHKI-SNYPLYVKTT-ILYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRSDANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLNPN-DSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFVLLGQPRFPALISINENNPFLMNSIKRLMIGSLFAGFIISNNIPPMTTPQLTMPYYLKMMALTVTILGFILALEISNTTQNLK--FNYSTNIFKFSNMLGYFPTIMHRLTPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQTKMSI--MVTNQKGLIKLYFLS---FLITI--IISTVLF----------NFHE---- +>Homo_sapiens_neanderthalensis_Neandertal +----MNENLFASFIAPT-ILGLPAAVLIILFPPLLIPTSK-YLINNRLITTQQWLIKLTSKQMMAMHNTKGRTWSLMLVSLIIFITTTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGAVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPVALAVRLTANITAGHLLMHLIGNATLAMST-INLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTTVWPTMIIPML-LTLFLITQLKMLNTNYHL-PPSPK-PMKMKNY-NKP-W-EPKWTKICSL-HS-LPPQS---MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGSFISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS----------MAHAAQVGLQDATSPIMEELIIFHDHALMIIFLICFLVLYALFLTLTTKLTNTSISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPVEAPIRMMITSQDVLHSWAVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPVFTL----------MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSTTLLMLGLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMVLFITSEVFFFAGFFWAFYHSSLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQLMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG---MTPMRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQITTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYYGSFLYSKTWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGYSVDSPTLTRFFTFHFILPFIIAALAALHLLFLHETGSNNPLGITSHSDKITFHPYYTIKDALGLFLFLLSLMTLTLLSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTILRSVPNKLGGVLALLLSILILAMIPILHVSKQQSMMFRPLSQSLYWLLAADLLILTWIGGQPVSYPFIIIGQVASVLYFTTILILMPTISLIENKML---KWA-----------------MANLLLLVVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLSTLITAQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFALFFMAEYTNIIMMNTLTTTIFLGTTYNALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFRYDQLMHLLWKNFLPLTLALLMWYVSMPITISSI-P-PQT--MNP-LAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLTKKMNPR-STEAAIKYFLTQATASMILLMAILFNNMLSGQW--TMTNTTNQYSSLMIMMAMAMKLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTL-SILSIMAGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLNSSTTTLLL---SRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTIMATITLLNLYFYLRLIYSTSITLLPMSNNVKMKW-QFEHTKPTPFL-------PTLITLTTLLLPISPFMLMVL---MN-FALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMSPARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVTSSLLLIIILALSLAYEWLQKG--LDWAE-MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMATLMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLSLLQCMLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPL-LFFNQINNNLFSCS-PTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLTLTAQELS-NSW-----ANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNP-LTKHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFSS------MTMHTTM-TTLTLTSLIPPILTT---LINPNKK-NSYPHYVKSI-VASTFIISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFSLWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARADANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNAN-PSLTPLLGLLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLGAITTLFAAVCALTQNDIKKIVAFSTSSQLG--LMVVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETANMSYTNAWALSITLIATS-LTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLAAGSLFAGFLITNNISPASPFQTTIPLYLKLAALAVTFLGLLTALDLNYLTNKLK--MKTPLYTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISASI--TTSTQKGMIKLYFLS---FFFPL--ILTLLLIM----------------- +>Pygathrix_nigripes_Black-shanked_douc_langur +----MNENLFTSFTHPT-LLGLPAVVPIILFPTLLLPTSK-YLINNRLVTIQQNLIQLIVKQMMAIHNTKGQTWSLMLMSLIIFIATTNLLGLLPHSFTPTAQLSMNLAMAIPLWAGTVITGLRFKTKSSLAHFLPQGTPTPLIPMLVVIETISLFIQPVALAVRLTANITAGHLLMHLIGSATLVLST-ISFSMTSLTLVLLVLLTILEMAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITIMIMM-PALYLIMQLKLLNTVYYF-PPSQK-VPSTQMF-NNP-W-QLKWTKIYLP-HL-HIQHY---MLINRWLFSTNHKDIGTLYLLFGAWAGTTGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVETGAGTGWTVYPPLAGNFSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDEICAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSMGSFISLVAMLLMIYMIWEAFASKRKVLLVEQPTYNLEWLHGSPPPYHTFDEPTFIKV-K--------MPHPVQLGLQDATSPIMEELIAFHDHAFMIVAMISFLVLYVLSSVLTTKLTNTNITDAQEMETIWTILPAIILILIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGALSALLMTSGLIMWFHFYSMTLLTLGLLTNMLTMYQWWRDIVRESTYQGHHTMSVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPHLGGHWPPTGIIPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKQMIQALSTTILLGIYFTLLQMSEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTVCLIRQLSYHFTSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTSLRKSNPIMKLINHSLIDLPTPSNISAWWNFGSLLATCLILQIITGLFLAMHYSPNTSSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGIALLLMVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSIDNPTLARFFTLHFTLPFIITAFTILHLLFLHETGSNNPCGIPSNSDKIPFHPYYTVKDMLGLVLLIFPLMILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLMSILILMIIPMLHKSKQQSMMFRPLSQFTLWLLTTVLLTLTWIGSQPVNQPFIMIGQMASMLYFITILILMPLASMIENNLL---K---------MF--------TVNLLLIILPTMAAMAFLTLTERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTTTLYIIAPALAFSIALLLWVPLPMPNSLINLNLGLLFILSTSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIIMLSVLLMSGSFNLHMLITTQEHLWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTATIFLGTLYPIHSPELFTTCFITKTLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLALLMWYISTLIMISGI-P-PQN--MNP-LAQLVIYSTMIMGTLITLLSSHWFLAWAGLEMNMLAFTSILIKKANIR-STEAATKYFLMQATASMILMMAITYNNLFSGQW--ALMNNPNPLSSLVMTMALAMKLGMAPFHFWVPEVTQGTPLMSGLLLLTWQKLAPISIMYQIYPSINTSILMTL-STLSIMAGSWGGLNQTQLRKILAYSSITHMGWMMMTMTYNPNITIFYMLMYIIMTSTAFLALNLNSNTTILML---SHTWNKLTWLMPLMLLTLLSMGGLPPLTGFMPKWMTIQELAKNNNFIMPSIMITMTLLNLYFYLRLTYTTSMTLLPTSNNTKMKW-QFENTKPTPLF-------PPLIIFTTLLLPMSPTILTLF---MN-LMLTLMINTSLTLLLTIIMFWLPQLNSYAEKANPYECGFDPLNSARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLSMMIKSSITLIIILTLSLAYEWTQKG--LDWTE-MSIIYMNIMLAFTTSLLGMLIYRSHLMSSLLCLEGMMLSLFIMSTLTALNTHFPLANIVPIALLVFAACEAAVGLALLISISNTYGLDHIQNLNLLQCMLKMIFPTMMLLPTTWFSKNNLIWINLTTHSLIISLIPL-LFFNQINNNLISHS-TYLSSDPLTTPLLMLTAWLLPLMIMASQYHLHNESPLRKKLYLSMMIFLQISLIMTFMATELILFYILFETTLIPTLIIITRWGNQAERLNASTYFLFYTLTGSLPLLIMLIFTYNKLGSLNIPLLTLMAQKLT-TSW-----SHNLAWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTPILYP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIMASLIQTPWSFTGAIILMIAHGLTSSMLFCLANSNYERTHSRIMLLSRGLQSLLPLMTFWWFVANLTNLALPPSINLIGELLVVMSSFSWSHITIIFTGLNMLITALYSLHMFITTQRGMLTSHIINMKPSFTRENMLMFMHMSPIILLTLNPSIIMGFTP------MMMHTSI-FMLTLTPLIFPIIIT---LINPNKN-NMYPNYVKTT-MMFTFTISLLPTTMYIFLDQDMIVSTWHWMTIQSMEITLSFKLDYYSMMFIPIALFITWCIMEFSLWYMNSDPNINQFFKYLLMFLITMLILITANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAAIQAILYNRIGDIGFILTMTWFLLYYNSWDLQQMFILNPN-PNMLPLVGLLLAAMGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMESNTMIQSLTLCLGAITTMFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFICSGSMIHNLNNEQDIRKMGGLFKTMPLTSTSLMIGSLALTGMPFLTGYYSKDLIIETANMSYTNAWALSITLIATS-MTSAYSTRTIILTLTGPPRFSTSVYINENNLALLNPMKRLATGSLLAGFFIVNNISPTTFPQLTMPYYLKLLALCVTTLGFLMALDLTLMTNNLK--MNIPSHMFKFSNMLGFFPMTIHRTVPYQNLTMSQNLAFLLLDLFWLEKSMPKTISHTHITTAI--TSTTQKGMIKLYFLS---FLIPL--TLIPLLMM----------------- +>Rattus_exulans_Polynesian_rat +----MNENLFASFITPT-MMGLPIVVTIIMFPSILFPSSE-RLISNRLHSFQHWLIKLIIKQMMLIHTPKGRTWALMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVILGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMD-ISPPTATITFIILLLLTMLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIVSSM-ITLFILFQLKISSQTFPA-APSPK-IVATEKT-NNP-W-ESKWTKIYLP-LS-LPQQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLNDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLVMIFMIWEAFASKREVLSVSYSSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAYPFQLGLQDATSPIMEELTNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILVLIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAMSALLLTSGLVMWFHYNSTILLSLGLLANTLTMYQWWRDIIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGYRNHMNQALLITILLGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLLKIINHSFIDLPAPSNISSWWNFGSLLGVCLMIQIITGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGMYYGSYTFLETWNIGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGVFMLLLFLMTLVLFFPDLLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILALLPFLHTSKQRSLTFRPITQTLYWILVANLLILTWIGGQPVEHPFIIIGQLASMSYFSIILILMPISGIIEDKML---KWN-------MY--------FINILTLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPTLSLTLALSLWIPLPMPHPLINLNLGMLFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMNGSFSLQMLITTQEHIWLLIPAWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTSIVFLGPLYYINHPELYSINFMMETLLLSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWYISLPIFLAGI-P-PYM--MNP-ITLIIIYFTILVGPVITMSSSNLLLMWVGLEMSLLAIIPLLTNKKTPR-STEAATKYFLTQATASMIILLAIVLNYKQSGMW--MFQQQTNNILLNMMLISLSMKLGLAPFHYWLPEVTQGIPMHIGLILLTWQKIAPLSILYQIHQFLNPTITTIL-AISSVLIGAWGGLNQTQTRKIMAYSSIAHMGWMMAILPYNPNLTLLNLTIYILLTIPMFIMLMMNSATAINSL---SLAWSKTPMILAMASIILLSLGGLPPLTGFLPKWAIISELLKNNYLILPTLMAIMALLNLFFYTRLIYSMSLTMFPTNNNSKMIS-HHPNLKHNFIL-------PTLTVLSTLTLPLSSQLMT-----MN-LFIIIMINTTLSLILISIAFWLPQMNLYSEKATPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTASVTTMTTTAFILVTILALGLSYEWTQKG--LEWTK-MTSAFLNMTLAFMLSLLGTFMFRSHLMSTLLCLEGMMLSLFVMTSTSTLNSNSMISMTIPITILVFAACEAAVGLALLVKISNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLTWLSSNKKTWINVTSYSFLVSLMSL-SLLWQNDENSQNFS-IMFSSDPLSTPLIILTTWLLPLMMLASQNHMKKENSMHQKLYISMLISLQILLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALISIQNSMGTLNFLILSLTTQHLP-PTW-----SNNILWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRISMILDP-LTKSLAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAIMIQTPWSFMGATMLMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMIFPLMATWWLLASLANLALPPLINLMGELFIVMSTFSWSNPSIILMATNIVITGMYSMYMIITTQRGKLTSHMNNLQPSHTRELTLMALHVIPLMLLTINPKLITGLTM------MNMMTSS-ILMILMLLTAPIIIS---MTNLPKF-IDFPSYATSS-IKFSFFLSLLPLLLFFHYNTEYMITNWHWLTINSMKLTMSFKIDYFSTLFLSVALFVTWSIMQFSSWYMHSDPCIDRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQIFLT-NT-NNPVPLTGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFHPLTSNNTSIMTAMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGSMMKVMPFTSSCLIIGSLALTGMPFLTGFYSKDLIIEAINTSNTNAWALMITLIATS-MTAVYSMRIIYFVTMTKPRYSPLITINENNPDLINPIKRLALGSIMAGFLISLNIPPTNIQVLTMPWYMKMTALLITILGFAIALELNNLTLKLS--MDKTTKLSLFSTSLGYFPSIMHRMIPQKTLNSSYKMSLNLLDLIWLEKTIPKSTSITQTHLSK--MMTNQKGLVKLYFLS---FLITI--SLIFILHIL---------NPEWFQ- +>Ctenomys_sociabilis_social_tuco-tuco +----MNENLFSSFITPT-LMGMPIIVLIIMFPIILFPSPK-RLINNRVTTLQQWLVKMILKQMMLMHSAKGRTWSLMLISLILFIGTTNLLGLLPHSFTPTTHLSMNLGMAIPLWAGTVILGFRYKTKMSLAHFLPQGTPILLIPMLIIIETISLFIQPLALAVRLTANITAGHLLMHLIGGATSVLFS-ISPPTAMITFIILLLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-TTLFILFQIKVSTHSFPM-NLQQP-SQMLMKQ-KMP-W-EKKWTKIYSP-LL-LHQL----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVXPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAIDFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNPTWAKIHFFIMFAGVNITFFPQHFLGLSGMPRRYSDYPDAYTFWNMISSMGSFISLTAVMVMIFMVWEAFASKREVMTTELTSINLEWLHGCPPPYHTFEEPTYIKT-L--------MAYPYQLGFQDATSPIMEELLQFHDHTLMIVFLISTLVLYLISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEVNNPLLTVKTMGHQWYWSYEYTDYDELNFDSYMIPTMELKPGDLRLLEVDNRVVLPMEMPVRVLISSEDVLHSWAIPSLGLKTDAIPGRLNQTILTSTRPGLFYGQCSEICGSNHSFMPIVIEMVPLKTFENWCTSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSTTILLLSMITNLMTMYQWWRDVVRESTYQGHHTTTVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGYWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKQMTQALAITIILGAYFTLLQISEYFEASFTISDGIYGSTFFVATGFHGLHVIIGSTFLMTCLLRQLYFHFTSKHHFGFEAAAWYWHFVDVVWVFLYVSIYWWGS--MTIIRKSHPLIKIVNHSFIDLPTPSNISAWWNFGSLLGVCLGLQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFIFLYLHIGRGIYYGSYTFMDTWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPTLVEWIWGGFSVDKATLTRFFAFHFILPFIISAMVMIHLLFLHETGSNNPSGMNSDSDKIPFHPYHTVKDILGVLFMMITLMSLVMFMPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILTLFPIMHLSKQRSMSFRPLSQCLMWMLVANLLILTWIGGQPVEHPFIIIGQLASVNYFFTILILMPSTALMENKLL---KW--------MY--------MINFMLLIIPILLAMAFLTLLERKMLGYMQLRKGPNIVGPYGILQPMADALKLFTKEPLYPSTSSIFLFTIAPSLALTLALSMWIPLPMPYSLINMNLGALFILATSSLAVYSILWSGWASNSKYALFGALRAVAQTISYEVTLAIILLSVLLLNGSYNLNNLMMTQKNIWLILPTWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNILMMNALTTIIFFNSMPNLTTPELHSTNFMIKTLILTALFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISMPIFMCNI-P-PQST-MNM-ALMMTIFTTLIMGTLITLISSHWLLMWVGLEMSMLAIIPILMNKNNPR-SIEAATKYFLMQATASMIMLLSIILTMMFSGQW--SIMYSTNQIISLILTISLIMKLGLAPFHFWVTEVTQGTSLIPGMILLTWQKIAPLSILIQIYPTINQPLIIIS-ATLSTLLGGWGGLNQTQLRKIMAYSSISHMGWMLIIMFYNPSISLFNLLIYIMLTITMFSTLLINNNLATLSL---SHVWSTSPPVIIIILMNLLSLGGLPPMTGFSPKWIIIQELMKNDNIMIPLIMTILALLNLYFYMRLTYSTTLTLFPASNNTKTKW-YFNMNKKMIMT-------PPLITLSIMSLPMTPMFMILN---MN-IIISLSTNYILTMILMTIAFWLPQLNIYTEKASPYECGFDPTEITRLPFPMKFFLIAITFLLFDLEIALLLPLPWAFQISTINMTSWISTSLILILSLGLTYEWLQKG--LEWTE-MTSVLLNITIAFIMSFLGIMLYRSHMMSSLLCLEGMMLSLFILSITIMLNYHYILAFSAPLILLVFAACEAAVGLALLVMISNTYGIDYVQNLNLLQCMLKIILPTIMLIPTVWLSNLPSMWINITSYSLLIALISI-SYLNKIDITSINYS-TMFSSDSLSSPLLILTTWLLPLMIIASQYHLKNETEMRKKTYITLLISLQLSLILTFTATELILFYILFEMTLIPTLIIITRWGNQTERMAAGLYFLFYTLVGSLPLLITLIYLQNQLGTLNFLMFNYYNSPIN-HSW-----SNNLMWLTCTMAFMIKFPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRILQLLDP-ITNQMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSIRCNSFVIVAILIQTPWSFMGATSLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQMLFPLMGTWWIIASLTNLALPPTINLFGELLIIMSTYSWCNMTLLLTGINILITALYSLYMLISTQRGKLPYHIHNLSPTFTRENILMSLHIIPLILLSLNPKIILGNLY------MNLLNTL-FIMTLTTLTLPILTS---MSNIHKK-LPYAPYTKKI-TSLSFFLSLIPTFMLFCSNNEVTMLNWNWLLIQTFHLNVNIKLDYFSILFMSVALFVTWSIMEFSLWYMHSDPYMDKFFKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRSDANTAALQAVLYNRIGDIGFILSMTWFLLYSNSWDFQQIFITHNK-INMIPMLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMQNNLALQTMCLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQHIRQMGGLHKILPITSSSLMIGSLALTGIPFLTGFYSKDLIIEAATTSYTNAWALTITLIATS-LTAIYSMRIIFFTLLNNPRFNFKPLMNENDPTMINPIKRLAMGSILAGFLMTHNIPITNLPQMTMPFQIKLAAILSTILGFTIALELNMLTKKLK--MYHPTKHNNFSNLLGYFPTFTHRMPPYLDLSMSQNLASSTIDLIWLEKILPKSISKMQITASM--FTSTQMGLLKVYFLS---FLISM--SMILLLML----------------- +>Eubalaena_australis_Southern_right_whale +----MNENLFAPFMTPV-MVGIPITTLIIILPSILFPTPN-RLINNRTISIQQWLTKLTSKQLMSAHSPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNVGMAIPLWAGTVFTGFRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGEATLALMN-ISLLTTLITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLLTILSML-LTLFVLLQLKISKHSHSP-NPKLV-LTKTQKQ-QTP-W-DTTWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNSTWTKIHFMIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFEEPAYINP-KWS------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEVNNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSTSML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLLTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITITLGLYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQMKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINDAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTTTAFSSITHICRDVNYGWIIRYLHANGASMFFICLYAHMGRGLYYGSYAFQETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAIVHLLFLHETGSNNPTGIPSNMDKIPFHPYYTIKDILGALLLILTLLMLTLFAPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAFIPMLHTSKQRSMMFRPFSQFLFWVLVADLLTLTWIGGQPVEHPYVIVGQFASILYFLLILVLMPTASLIENKLM---KW--------MF--------MINILTLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPVLALTLALTMWSPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLATTQEHLWLIFPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTAILFLGTFHDPHTPELYTTNLIIKTLLLTMSFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHISLPIMTASI-P-PQT--MNP-SILIILLTTLILGTMMVITSSHWLLAWIGFEMNMMAFIPIMMKNPSPR-ATEASTKYLLTQATASALLMMAIIINLMYSGQW--TVTKLFNPTASTLMTVALAIKLGLAPFHFWVPEVTQGIPLVTGLILLTWQKLAPLSILYQISPSINLHLMLTM-SLLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILLYSPTLTLLNLLIYITMTFTMFMLFIQNSTTTTLSL---SQTWNKMPVITTLTMLTLLSMGGLPPLSGFMPKWMIIQELTKNEILIMPTFMAITALLNLYFYMRLTYSTALTLFPSMNNMKMKW-QFDSTKQTILL-------PTAIVMSTMLLPLTPMLSTLL---MN-LLLTLLTNTTLALLLVFIAFWLPQLNAYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLNTMLTMALFLISLLAASLAYEWTQEG--LEWAE-MTLIHMNIIMAFSMSLVGLLMYRSHLMSALLCLEGMMLSLFVLAALTILNSHFTLANMMPIILLVFAACEAAIGLALLVTISNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKNNLIWINSTTYSLLISFTSL-LLLNQLNDNSLNYS-LIFFSDPLSTPLLMLTMWLLPLMLMASQSHLLKEPPVRKKLYITMLIMLQVLLIMTFTATELILFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIYLQNTTGSLNFLLLQHWAQPLS-TSW-----SNIFLWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSMLNP-LTEHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFLPLMATWWLLASLTNLALPPSINLIGELFVVMSAFSWSNPTILLMGTNIVITALYSLYMLIMTQRGKHTHHINNITPSFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSF-ALLTLLILTTPIVMS---TTSIHKN-NKYQSYVKNI-VFCAFITSLIPAMVYLHTNQEALISNWHWITIQTLKLTLSFKMDYFSLMFMPVSLFITWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLLASMAWFLSNMNTWDLQQIFMLNQN-SPNFPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLMENNKFIQTTTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPFTTTALIIGCLALTGMPFLTGFYSKDPIIETATSSYTNAWALLLTLTATS-LTAIYSTRIIFFTLLGQPRFPPSTTINENNPLLINPIKRLLIGSIFAGFILSNSIPPMNTPLMTMPLHLKLTALAMTTLGFILAFEINTHTQNLK--HTYPSNFSKFSTLLGYFPTIMHRLPPHLDLLMSQKLATSLLDLTWLETILPKTTALIQLKAST--LTSNQQGLIKLYFLS---FLITI--ILSMILF----------NYPE---- +>Capricornis_crispus_Japanese_serow +----MNENLFTSFITPM-VLGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWALQLISKQMMIIHNVKGQAWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTMAASITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKISKHNFYY-NPELT-TTKKPKQ-SSP-W-EATWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFLLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLAVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIIALMLTTKLTHVSTMDAQEVETIWTIMPAIILITIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASVL----------MTHQTHGYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMILLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTNIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPTGISSDTDKIPFHPYYTIKDILGIVLLILTLMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALVPFLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVLMPVASTIENNLL---KW--------ML--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALIMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYLPELYTINFTIKSLLLTTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILLTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSSQW--TVMKLFNPTASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLVIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKAPIMTILTLITLMSMGGLPPLSGFMPKWMIIQEMTKNNNIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKRMILL-------PTMTVLSTMLLPLTPILSILD---MN-LMITLMTNFMLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLSTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFAMSLMGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNTIWINPTLHGLLISFTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESLARKKLFISMLILLQLLLIMTFTATELIFFYVLFEATLIPTLIIITRWGNQADRLNAGLYFLFYTLAGSLPLLVALIHIQNTIGSLNFLILQYWVQPMP-NSW-----SNTFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTDFMSYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLVGELFVMMSTFSWSNITIILMGLNMTITALYSLHMLITTQRGKYTHHINNISPSFTRENALMALHMLPLLLLSLNPKVILGPLY---MKVINLLSSF-TLTTLILLITPIMTT---SLNTYKS-SNYPLYVKTT-VSYAFITSMIPTMMFIHTGQETVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLSFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLKPD-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNEFVQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLLKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFTLLGQPRFPTLITINENNPLLINSIKRLLIGSLFAGFIISNNIPPTTVPQMTMPYYLKMTALVITALGFILALEISNMTYTLK--FNYPSNTFKFSNLLGYYPTIMHRLVPYTNLTMSQKSASSLLDLIWLETILPKTISTTQMKMSI--MVTNQKGLIKLYFLS---FLITI--LTSMILF----------NFHE---- +>Kobus_ellipsiprymnus_waterbuck +----MNENLFASFITPM-VLGLPLVTLIVLFPSLLFPTSN-RLVNNRLISLQQWALQLVSKQMMSIHNPKGQTWTLMLMSLILFIGSTNLMGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMILSMF-LALFIIFQLKISKHNFYY-TPELT-LTKMSKH-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMLMIFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQFGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSARPGLYYGQCSEICGSNHSFMPIVLELVPLEYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNTTTLLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRSHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNVRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLVLQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVIRYMHANGASMFFICLFMHVGRGLYYGSYIFLETWNIGVVLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAAITMVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGALLLILVLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPTASTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSVSMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYIPELYTVNFIIKTLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-ITFTVIMMTVMLGTTIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYLLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPVASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNMILTL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPVMTVLVLITLLSMGGLPPLSGFMPKWLIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPSMKQMTLL-------PTMTVLSTMLLPLTPILSILE---MN-LMLALLTNFTLATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLILLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLAGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIISTMMLIPLTWLSKSNMIWINSTMYSLLISLTSL-LLMNQFIDNSLNFS-LVFFSDALSTPLLILTMWLLPLMLMASQHHLSKESLIRKKLFITMLIMLQLFLIMTFTATELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALTYVQNTVGSLNFLILQYWVQPMP-NSW-----SNILMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTLFLNP-XTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLIMTQRGKFTHHINNITPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MKMFSSF-TLMTLLLLTVPIMMT---NSNIYKS-SKFPLYVKTI-ISYAFITSTIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSVMFVPIALFVTWSIMEFSMWYMHADPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDFQQIFTLDSN-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLVATS-FTAIYSTRIIFFALLGQPRFSTLILINENNPLLINSIKRLLIGSLFAGFIISNNIPPMAIPQMTMPHYLKMTALTVTILGFILALEISNMTHNLK--FNYPSNIFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLENILPKTTALFQTKMSI--TVTNQKGLIKLYFLS---FLVTI--LVSTFLL----------NFHE---- +>Rusa_alfredi_Visayan_spotted_deer +----MNENLFTSFITPM-ILGLPLATLIVMFPSLLFPTSN-RLVNNRLISLQQWMIQLVSKHMMGIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLTLMS-ISTTLALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LALFIIFQLKISKYNFHF-NPELM-STKTQKQ-NIP-W-EMKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGTGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVEMIWTILPAIILILIALPSLRILYMMDEINNPFLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLLLAMHYTPDTTTAFSSVSHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTIMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGILLLVLLLMLLVLFAPDLLGDPDNYTPANPLNTPSHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILTLMPLLHTSKQRSMTFRPFSQCLFWILVADLLTLTWIGGQPVEHPFIIIGQLASILYFSIILVLMPITSTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPIMALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPVLPELYTINFIIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFTSSI-P-PQT--MNP-IIFILILSTMMMGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEAATKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPMASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFTSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTILVLVTLLSMGGLPPLSGFMPKWMIIQELTKNDSLIMPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSILE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNDLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MPLVYMNIMTAFVVALAGLLMYRSHLMSSLLCLEGMMLSLFVMASLTILNSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLVLLQLFLIMTFTAMELIFFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALVYLQNITGSLNFLVLQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVVSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGSLY------MNLFSSF-TLVTLLLLTIPIMAT---SSDNYKT-PNYPLYVKTI-TSCAFITSMIPAMMFIHTGQETVISNWHWLTIQTIKLSLSFKMDYFSTMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLNPS-DSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDVIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTIPQLTMPYHLKTMALTMTILGFILALEISNMTQNLK--FNYSTNIFKFSNMLGYFPTIMHRLAPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQTKMSM--MVTNQKGLIKLYFLS---FLVTI--TVSTVLF----------NFHE---- +>Odobenus_rosmarus_rosmarus_Atlantic_walrus +----MNENLFTSFTSPT-MMGFPVVMLIILFPSIMFPSPD-RLINNRLASIQQWLIQLTSKQMMSIHNHKGQTWTLMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLMHLIGGATLALTN-ISMTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTVIVSTI-LTLFIVFQLKISKHSLQT-SLELK-STLPLKT-NAP-W-DKKWTKIYLP-LS-LPLP----MFMNRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMTGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGPSVDLTIFSLHLAGVSSILGAINFITTIVNMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVVAAGITMLLTDRNLNTTFFHPSGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFTLNNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTVWNTVSSMGSFISLTAVMLMVFMVWEAFASKREVEAVELTSSNIEWLHGCPPPYHTFEEPAYVMS-K--------MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISTMLTTKLTHTNTMDAQEVETVWTILPAIILIMIALPSLRILYMMDEINSPFLTVKTMGHQWYWSYEYTDYEDLSFDSYMVPTQELKPGELRLLEVDNRMVLPMEMTVRMLISSEDVLHSWTVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLESVPLSYFEKWSASILQ---------MTHQTHTYHMVNPSPWPLTGALSTLLMTSGLIMWFHFNSTHLLLLGLMTSVLTMCQWWRDIVRESTFQGHHTPTVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHLCLMEGNRKHMLQALFITILLGLYFTLLQASEYYETSFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNTFIDLPTPSNISAWWNFGSLLATCLILQILTGLFLAMHYTSDTTTAFSSITHICRDVNYGWIIRYMHANGASMFFICLYAHMGRGIYYGSYTLAETWNIGIVLLLTIMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDLVEWVWGGFSVDKATLTRFLALHFVLPFMALALTAVHLLFLHETGSNNPSGILSDSDKIPFHPYYTIKDILGLIILILILMLLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLAIVPSLHTSKQRSMMFRPISQCLFWLLVADLITLTWIGGQPVEHPFIIIGQLASILYFMILLVFMPIAGMIENSIL---KW--------MF--------MINILSLMIPILLAVAFLTLVERKVLGYMQLRKGPNIMGPYGLLQPIADAMKLFTKEPLRPSTSSTSMFIMAPILALSLALTMWAPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFSLTTLITTQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTTLFLGAYHNPCMPELYTINFTLKTLALTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIITASV-P-PQT--MKP-LTYITIMTTMMSGTMIVLMSSHWLMIWIGFEMNMLAFIPILMKNFNPR-TMEASTKYFLTQATASMLLMLGITINLMLSGQW--TVLKPSNLTSSSLMTIALAMKLGMSPFHFWVPEVTQGTSLPSGMILLTWQKIAPLSILYQIAPSINSGLLATM-AIASVLVGGWGGLNQTQLRKILAYSSITHMGWMAIIMMYNPTLTLLNLAIYITMTLGTFMLFIHNSSTTTLSL---SHTWNKLPLMTSMILMLMLSLGGLPPLSGFVPKWMIIQELTKNDMIILPMFMAMSALLNLHFYMRLSYTTTLTMFPSTNNMKMKW-QFESMKKTVLL-------PPLIILSTMLLPVTPMMIILD---MN-MILTLLTNTALASLLMLIAFWLPQLNTYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHANNMTTVLTTALMLISLLAASLAYEWAEKG--LEWTE-MSMVYANIFMAFVVSLMGMLVYRSHLMSSLLCLEGMMLSLFVMMSVTILNNHFTLANMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTIMLMPLTWMSKPNMIWINTTAYSLLINLITL-SFLNQSNDNNLNLS-LLFSTDSLSTPLLALTTWLLPLMLMASQHHLSKEPLTRKKLYITMLISLQLLLIMTFTATELIMFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLIALLHMQNNMGTLNLLVTQYMTQTLL-DSW-----SNIFLWLACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLNP-LTNFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRIMILTRGLQTLLPLMAMWWLLASLTNLALPPTINLIGELLVVITSFSWSNITITLMGANIIITALYSLYMLTMTQRGKYTHHIKNIKPSFTRENALMALHLLPLLLLSLNPKVILGPLC------MNLFTSS-VITTLLMLTMPIMLA---STSIYKS-KLYPEYVKTT-TSYAFVISTVPMMMFIYSGQEMIISNWHWMTIQSVKLSLSFKLDHFSMIFMPVALFITWSIMEFSMWYMNSDPYINKFFKYLLMFLVTMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRSDANTAALQAILYNRIGDVGLIMAMAWFLTNLNTWDLQQIFMADHN-NLNMPLLGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLIEQSAMTQTAILCLGATTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQHIRKMGGLFKMLPLTTTSLVVGSLALTGMPFLTGFYSKDPIIETANTSYTNAWALMLTLTATS-MTAAYSTRIMFFTLLGQPRSNPTVMSSENNPLLINSIKRLLVGSIFAGYLMFYSIPPTTVPQTTMPHYLKLTALVVTLLGFIVALELTTTSHKLK--FKYTSNLFKFSSLLGYFPAIIHRFMPSIGLSTSQKLAFTLMDSTWLENVLPKSISYFHMKSST--IISNQKGLIKLYFLS---FMITL--ALALTMI----------KYHG---- +>Rhinolophus_ferrumequinum_korai_ +----MNENLFASFITPT-MMGLPIVILIIVFPTILFPSTN-RLINNRLIAIQQWLIHMTSKQMMAIHNPKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALLS-ISTATALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITIVSMI-LALFITMQLKVSKHYFHS-NPEPL-EVKSSKH-TTP-W-ETKWTKIYSP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGSLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLDTTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMVFMVWEAFASKREVSTVELTTTNLEWMHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTSLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSSSMV----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSALLLTLGLLANMLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRSHMLQALFITIFLGLYFTLLQASEYHETSFTIADGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLFKIINDSFVDLPAPSSISSWWNFGSLLGICLAIQILTGLFLAMHYTSDTATAFHSVTHICRDVNYGWVLRYLHANGASMFFICLFLHVGRGIYYGSYTFSETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTTLVEWVWGGFSVDKATLTRFFALHFLLPFIIAAMVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLVLMLMALLSLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAAIPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPLASIAENHLL---KW--------MF--------MINLLLLIIPILLAVAFLTLIERKVLGYMQFRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSISMFIIAPVLALTLALTMWTPLPMPHPLINLNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLLNGSFSLSTLIITQEHTWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNIFTTTLFLGAYHNPIMPELYTTNFVLKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTMPVITAGI-P-PQT--MNP-LIFTMISFTIILGTLIVMTSSHWLLIWIGFEMNMLAIIPMMMKRSNPR-STEASTKYFLTQATASMLLMLAIIINLFHSGQW--TVTNIPSPTASVIMTLALTMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYQISHSINLDILLTM-SILSILVGGWGGLNQTQLRKILAYSSIAHMGWMTTIMAYNPTMALLNLILYILMTTTTFMLFMTNASTTTLSL---SHLWNKMPMLATSILVIMLSLGGLPPLTGFLPKWMIIQELTKNDSIILPTLMAITALLNLYFYMRLTYTTSLTMFPSTNNMKIKW-QFENTKWTTLL-------SPMIILSTLTLPLAPMLSTLN---MN-FMLTLLTNTLLALLLVTIAFWLPQTNVYSEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLKIMLTTSLLLISLLAISLAYEWSQKG--LEWTE-MALIYMNTMLAFTMSLLGLLLYRSHLMSSLLCLEGMMLSMFVMVTVMILNTHLMTSSMMPIVLLVFAACEAALGLSLLVMVSNTYGVDHVQNLNLLQCMLKIIIPTTMLIPLVWLSKHTMIWINPTMYSLMISLLSL-PMLNQFTDNSLNPS-LVFFSDSLSTPLLMLTTWLLPLMLIASQHHLSKEPLNQKKLFMTMLILLQVFLIMTFTATELILFYILFEATLLPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTTGTLNFLLSTYWLQPLS-PSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMLLNP-ITDFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTILPLMAAWWLLASLTNLALPPTINLIGELFVVMSTFSWSSMSIILMGTNIVITALYSLYMLITTQRGKHTYHINNLTPSFTRENTLMAMHLTPLLLLSINPKIILGALY------MNLLTPT-ILTTLLILTIPIITA---TLNLHKI-STYPYYVKTT-IVWAFSISLIPTMIFIQSGQEVILMNWHWLSIQTLKISMSFKLDYFSMIFMPVALFVTWSIMEFSLWYMHLDPYIDRFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFLVAMAWFLFNTNTWDLQQIFSLNLN-NTNFPLAGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLIENNKTIQSMVLCMGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLYKTLPFTTTALTVGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLITLIATS-LTAVYSTRIIFFALLGQPRFPTLILINENNPYLMNSIKRLLIGSIFAGFFITNTIPTMTVPQMTMPWYLKMTALAVTILGFTIALDLSSATQNLK--FKYPSASFKFSNLLGYFPTVMHRSMPLTNLSLSQKTASLLLDLTWMENILPKSISMLQMKTST--LVSSQKGQIKLYFLS---FLLTL--TLSLIVL----------ILHE---- +>Eptesicus_serotinus_Common_serotine +----MNENLFASFITPT-LMGLPVVIIIIMFPSIFFPSTT-RLISNRLIAMQKWLIRLTTKQMMAIHSKKGQTWALMLMSLIMFIGSTNLIGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGSATLALMD-ISMTTALITFIILVLLTVLEFAVALIQAYVFTLLVSLYLHDNAMPQLNTSTWSITILSMI-ITLFIIFQLKISKHCYYT-NPEPL-VTKTQEH-KNP-W-ETKWTKIYLP-LS-LPQH----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFIHWFPLFSGYTLSSTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVVLMVFMVWEAFASKREVLTVELPSTNLEWLHGCPPPYHTFEEPTYVNH-K--------MAYPFQLGFQDATSPIMEELLSFHDHALMIVFLISSLVLYVISLMLTTSLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPLVTIKTLGHQWYWSYEYTDYEDLMFDSYMIPTNELSPGQLRLLEVDNRVVLPAELTIRMLITSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGVYYGQCSEICGSNHSFMPIVLEMVPLKHFEKWSLSMM----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSTFLLLIGLTTNMLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFILSEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRSHMMQALLITILLGLYFTVLQASEYYETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCLLRQMSFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINQSFIDLPAPSNISSWWNFGSLLGICLALQIVTGLFLAMHYTSDTATAFNSVSHMCREVNYGWVLRYMHANGASMFFICLYLHIGRGLYYGSYMFKETWNMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLFVMMLTLLCLVLFSPDMLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIIIPFLHTSKQRSMTFRPLSQCLFWLLVADLLTLTWIGGQPVEHPYIIIGQLASILYFLIILVFMPLASIMENHML---KW--------MY--------FINLLTTIVPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPMQPLTSSLTLFIIAPTLALTLALMMWIPLPMPYPLVNMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSILLMNGSFTLSTLITTQEYIWLMMPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTVVLFLGAYNNPLFPGTYTTNFTIKVLLFTTFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVSLPIILASI-P-PQT--MNP-MVFSLIITTMMSGTLLVMTSSHWFMVWVGFEMNMLAIIPLLTKQHNPR-STEAATKYFLTQATASMLLMMAAIINLLYTGHW--SLLKLISPTASTMMTMALAMKLGLSPFHFWVPEVAQGIPLSSGLILLTWQKLAPLSILYMISPIIDLNLLMIM-ALLSIGIGGWGGLNQTQLRKILAYSSIAHMGWMASILTYNPTMMLLNLYIYIMMTITTFLLLMINSTTTMNSL---SYMWNKLPLITMIILIIMMSMGGLPPLTGFLPKWLIIQELVKNNNITISTIMALLALLNLYFYTRITYTTSLTMFPTTNNTKITW-QFKDPKHLIYL-------SPMIIISTLTLPTSPIMMILE---MN-LMLTLITNTLLALLLVTIAFWLPHMNAYAEKSSPYECGFDPMGSARIPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLLLMLFMSLFLILLLIISLAYEWMQKG--LEWSE-MSLTYMNIMMAFITSLLGLLMYRSHLMSSLLCLEGLMLSLFVLVSLMILTTNSTLTNMLPIILLVFAACEAALGLSLLVAVSNTYGVDHVQNLNILKCMLKIILPTIMLIPLTWLSKNNTMWINSTMYSLAISMACL-PLMNQPCDSSLNMS-LLFFSDPLSTPLLLLTTWLLPLMIIASQHHLSKEPTPQKKLYITMMILLQIFLIMTFSATELIMFYILFEATLVPTLIIITRWGGQTERLNAGIYFLFYTLAGSLPLLVALIYTQTTTGSLNLLLAQYWNQNPT-QMW-----ACSALWVAYMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITPVLSP-TANYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAILIQSPWGYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQMILPLMAAWWLLASLMNLALPPSINLIGELFVTMAMFSWSYFSIILLGINIIITALYTLYMLIMTQRGKYTYHIHNIKPSFTRENTLMALHLVPLLLLMIKPQIILGNMY------MNMFSAM-MLLSLIILTLPLIKN---TKTNPNL-KSYPEYVKTM-ISYSFIISLLPAIMFIYSGKEMMISNWHWMTIQTMKLSLSFKLDFFSMMFVPIALFITWSIMEFSMWYMHSDPNINKFFKYLLMFLITMLILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFIMSMAWFMAKVNSWEMQQIFMLSTE-DTTLPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPMMENNNTILTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLFKPMPFTTTALIAGSLALTGMPFLTGFYSKDMIIEAANTSYTNAWALLLTLVATS-LTAIYSSRIIFFALLGKPRFSSLITINENNPLLINPITRLLIGSIFAGFIISNNILPSTVPQMTMPMYLKITALLVTLMGFTLAMELNYFTQNLK--STHSTSSLKFSSLLGYFPSIMHRINPLMTLHTSQKSATMLMDLIWLENMLPKLTAKIQQNLST--TVSAQEGLVKSYFMS---FLITL--TIAITTL----------NFLE---- +>Dicerorhinus_sumatrensis_Sumatran_rhinoceros +----MNENLFASFTTPT-MMGLPIVILIIMFPSIMFPSPN-RLINNRLISMQQWLLQLTSKQMMSAHNSKGQTWALMLMSLILFIASTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVFVGFRHKTKASLAHFLPQGTPVFLIPMLVIIETISLFIQPIALAVRLTANITAGHLLMHLIGGATLALMD-ISPTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIMSMI-ITLFIVFQLKVSNHLHPS-NPELK-PTKTLTH-TTP-W-ESKWTKIYSP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNMAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLALPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYMLNQTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFMVWEAFASKREVSTVELTTSNLEWLHGCPPPYHTFEEPVYVNL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTPDLKPGELRLLEVDNRVVLPMEVTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLVSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLVMWFHYNSMLLLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIISHSFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTPDTTTAFSSVAHICRDVNYGWIIRYTHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGTILLLTLMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAITHLLFLHETGSNNPSGIPSNMDKIPFHPYYTIKDILGALLLILALLTLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILLIVPSLHTSKQRSMMFRPLSQCVFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFSLILVLMPLAGIIENNLL---KW--------MF--------TINMLLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLKPSTSSTTMFIIAPILALTLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNAFTTILFLGAFHNPYMPELYTINFTVKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPITMSSI-P-PQM--MNP-IVFTTILTTVILGTMIVMTSSHWLMIWIGFEMNLLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMMAIIINLMYSGQW--AVTKIFNPTASIIMTLALAMKLGLSPFHFWVPEVTQGISLASGLILLTWQKLAPMSVLYQIAPSINLDLLMTM-AILSILMGGWGGLNQTQLRKIMAYSSIAHMGWMTAILMYNPTMTVLNMLIYITMTLTTFMLFMTNSSTTTLSL---SHMWNKTPLITSLILITMLSLGGLPPLSGFIPKWMIIQELTKNNSIILPTSMAIMALLNLYFYMRLTYSTSLTMFPSTNNMKMKW-QFENSNRMNLL-------PTLTIMSTLLLPLTPIMSILN---MN-LMLALFINTLLASVLVLIAFWLPQLNIYSEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTDLKTMLTMALALISLLAASLAYEWTQKG--LEWTE-MSLVHMNIFLAFTVSLMGLLMYRSHLMSSLLCLEGMMLSLFIMATMMVLNSHFTLASMMPIILLVFAACEAALGLSLLVMISNTYGTDYVQSLNLLQCMLKIIIPTLMLIPLTWLSKNSMIWINTTTYSLLISLISL-SFLNQPNENSLNIS-LTFFSDPLSTPLLILTTWLLPLMIMASQHHLSKEPLTRKKLYITMLVMLQMLLIMTFTSMELISFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLIALIYIQNLTGSLNLLLIQYSAQTLP-DSW-----SNALLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMILNP-LTNYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERTHSRTMILARGLQTLLPLMAMWWLLASLTNLALPPTINLVGELFVVMSSFSWSNITIILMGTNIIITALYSLYMLITTQRGKYTYHINNIKPSFTRENTLMTLHLLPLLLLSLNPKIILGTLY------MNMFSPL-MLTSLFMLTLPIISI---TTNTHKN-ATYPYLVKNT-ISCAFITSLIPAMMFIQSGQEVIISNWHWMTIQTLKLSLSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHSDPYITQFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDIGFIMSMAWFLCNMNSWDLQQIFTLNST-HTNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTVQTFTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPFTATSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLVTLVATS-LTAAYSTRMVFFTLLGQPRFPTLITINENNPFLMNSIKRLLIGSIFAGFLISNSIYPTTIPKMTMPYYLKLTALAVTILGFALALELSLATYNLK--PKHPSNPLKFSYLLGYFPTIFHRLPPSMSLLASQKAASLLLDSIWLENILPKSISQFQMKTSM--LVSNQKGLIKLYFLS---FLITL--ALSLLLL----------MPHE---- +>Callosciurus_erythraeus_Pallass_squirrel +----MNENLFASFTTPT-MMGLPIVILIILFPNILFPSPN-RLINNRLTSLQQWLIQLILKQMMMMHNLKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRHKTKASLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTS-ISPPTAMITFIILILLTMLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLTTIISMF-LALFILFQVKISNHPFPS-NPSSK-DMALTHY-KTP-W-ENKWTKIYLP-LS-LPLQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDMWAKIHFTVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTAWNTVSSMGSFISLTAVMIMIFMIWEAFASKREILMVELTSTNLEWLHGCPPPYHTFEEPTYVKV----------MAYPFELGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINDPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFESWSSSMQ----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSNSILTLGMLTNILTMYQWWRDIVREGTFQGHHTTIVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPELGSCWPPVGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRMHTIQALSITIALGLYFTLLQASEYLETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLLVCLMRQLNFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLIKIINHSFIDLPTPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGLYYGSYLYFETWNIGVVLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPAGLISDSDKIPFHPYYTIKDILGLLALLLIFMMLTLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVIALLFSILILVLMPILHTSKQRSMMFRPLSQCLFWILVADLFTLTWIGGQPVEHPFITIGQLASILYFSLILLMMPIASLIENKLL---KW--------MF--------MINLLLLIIPILLAMAFLTLIERKLLGYMQLRKGPNVVGPYGLLQPFADAMKLFIKEPLKPLTSSTFLFIMAPSLALTLAFTMWIPLPMPQPLINMNMGVLFILATSSLGVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQQSIWLLLPTWPLAMMWFISTLAETNRAPFDLAEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGTLLNPMAPESFTFSFMMKTLLLTSMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHISLPITIACI-P-PQT--MNP-ITSLAIYLTLFSGTLITLLSSHWLLAWVGLEMNMLAMIPILMSKTNPR-STEAASKYFLVQATASMMLMMSAIMNFMKTGQW--LLTNPLAPIPSLMITMALSMKMGLAPFHLWVPEVTQGTTLMSGLILLTWQKIAPISIMTQVIQSINFPLLTAM-AILSILMGGWGGLNQTQLRKILAYSSIAHMGWMMAIIPFNPALTMLNLIIYIILTINMFLLFHLNKNTTTLML---SNTWNKFPLLISITLIILMSLGGLPPLTGFTPKWMIIKELVSNDNIIVPLTMAMMALLNLYFYMRLIYSTSLTLFPSSNNNKMKW-QFENTKMTPLI-------PAIMIMSTLSLPLTPMMSILN---MN-LVVSILTNTFIALLLISVAFWLPQLNIYVEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDNLMLMLIVALLLLLILTLGLAYEWIHKG--LEWTE-MPIIILNITIAYMISLLGVFIYRSHLMSSLLCLEGMMLAMFILSTLMTLNSHFSLSYMMPIILLVFAACEAAVGLALLVMVSNTYGLDYVQNLNILQCMLKIILPTILLAPLTWFSKNSMIWINPSIHSLMISLLVL-LSLNKTSDSDLVFS-PTFFSDPLSSPLLILSAWLLPLMIMASQNHLSNEPLVRKKLYILMLISLQSFLIMTFSAMELIMFYVLFEATLIPTLIIITRWGNQSERLNAGLYFLFYTLAGSLPLLIALIYIQKTMGSLNFMISMYQNFNLL-STW-----TNDILWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMIRISILLHP-ITSSMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERTHSRTMLLARGLQSILPLMAMWWLLASLTNLALPPTINLIGELFIILATFSWSNMTIILTGTNMLITALYSLYMLISTQRGKFTYHLSNINPSLTRENMLMFMHIFPLILLSMNPSIILGQLY------MNMFSSF-ILLSLLALTFPIFLT---LTDLYKS-NKYPNYVKNT-IIYALVFSLTPMLMFIYSDYELIISNWHWMTIQTLNLTMSFKLDYFSMLFMPIALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLANSNSWDLQQLFII--K-PSLLPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLIETNKTIQSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLFKVLPFTSSSLIVGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALTITLIATS-LTAVYSTRIIFFALMGQPRFSSLSPINENNPQLINSIKRLLVGSIFAGYLLSNNIPPMNTPILTMPLYLKLMALFITVMGFTIAMDLNWLSLYFK--TKPYSNLSNFSNMLGYFPLTIHRLYPYINLSASQKSASTLLDMIWIEKTMPKLITSFQSSAST--MTSNHKGLIKLYFLS---FLLSI--TLASVFMI---------YSHE---- +>Okapia_johnstoni_okapi +----MNENLFASFITPT-FLGLPLVTLIIMFPSLLFPTSS-RLVSNRLISLQQWALQLMSKQMMGIHNTKGQTWTLMLMSLILFIGTTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVATGFRNKTKASLAHLLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISAMTALITFIVLVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFTIILSMF-MALFIMFQLKISKHNFYS-DPELI-LTKTHKQ-NTP-W-ETKWTKIYLP-LL-LPQHS---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWTKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLAVDLTTTNLEWLNGCPPPYHTFEEPTYINS-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISSMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAVPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLEYFEKWSTSML----------MTHQTHPYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLFLGLTTNMLTMYQWWRDIIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMTHLLFLHETGSNNPTGIPSDMDKIPFHPYYTIKDILGMLLLILILMLLVLFMPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALALSILVLTLMPLLHTSKQRSMMFRPLSQCLFWILVADLLTLTWIGGQPVEHPFITIGQLASIMYFSLILVLMPAASMIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKTLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSTSMFILAPILALSLALTMWTPLPMPYPLIDMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSYTLSTLIITQEQMWLILPAWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNAFTTTLFLGAFHNPYLPELYTVNFTLKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIYIIILTTIMLGTIIVTISSHWLFIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPTASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPYINLNMILTL-SIASIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPNMMVLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKAPVMTILILVTLMSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTLMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFPITKHMTLL-------PTTVVLSTMLLPLTPILSVLG---MN-LMMALLTNLTLATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTKDLGTMLTTALFLISLLAASLAYEWTQKG--LEWTE-MSLIHMNIMTAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFVLAALTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWVNSTTHSLLISLTSL-LLLNQFGDNTLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESLTRKKLYITMLILLQLFLIMTFTAMELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLITLTYIQNTVGSLNFLMLQYWAQPVP-NTW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMLLNP-LTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGTNMVITALYSLYMLITTQRGKYTHHINNITPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNLFPSF-TLITLFLLTMPILAT---GLNTYKT-PDYPSYVKTT-ISYAFITSMIPTMVFIHTGQETVISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNTWSLQQIFILNPS-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPFLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-FTAIYSTRIIFFTLLGQPRFPTLITINENNTLLINSIKRLLIGSLFAGFIISNNIPPMTIPQMTMPHHLKMTALAVTALGFILALEISNMTQNLK--FKHPSNIFKFSNQLGYFPTIMHRLAPHMSLTMSQKSASSLLDLMWLENILPKTTALAQVKMST--MITNQKGLIKLYFLS---FLITI--LISMILF----------NFHE---- +>Microtus_levis_East_European_vole +----MNENLFASFITPT-MMGLPIVVLIIMLPSMLMTSSK-RLISNRFHSFQQWLVKLIIKQMMLIHSPKGRTWSLMLVSLIMFIGSTNLLGLLPHTFTPTTQLSTNLGMAIPLWAGAVILGFRHKLKASLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLTS-ISPPTATITFIILALLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITVLSTT-ITLFILMQLKISLHNFPQ-TPSVK-SMKLMKT-NNP-W-ESKWTKIYSP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLDDMWAKTHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLIMIFMIWEAFASKREVLNVDHTSTNLEWLHGCPPPYHTFEEPTFVKV-K--------MAYPFQLGLQDASSPIMEELMNFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLCFDSYMVPTSDLKPGELRLLEVDNRVILPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKNFEDWSLSMI----------MTHQTHAFHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSATLLSLGLLGNSLTMYQWWRDVIREGTYQGHHTPIVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNNMNQALLITIMLGVYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIICLLRQLKYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTIIRKKHPLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLITQILTGLFLAMHYTSDTATAFSSVAHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGVYYGSYNMIETWNMGVVLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVLVHLLFLHETGSNNPTGLNSDADKIPFHPYYTVKDFLGVLILLMAFMILTLFFPDILGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSIVILAFMPLLHTSKQRALTFRPITQTMYWILVADLFVLTWIGGQPVEYPFITIGQTASIAYFAIIVIFMPMAGMIENDIL---DLD-------MY--------FINILMLLVPVLIAMTFLTLVERKILGYMQLRKGPNIVGPYGVLQPFADAMKLFIKEPLRPLATSTTLFIIAPTLSLSLALSLWIPLPMPHPLVNLNLGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSFSIQSLIYTQEQLWLLAPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIILMNALSTIVFMGPFHNFNNPELYTVNFMLKTLTLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISTPIFMASI-P-PYT--MNP-TTLMIIYLTIMVGPVITMFSSNLFVMWIGLEMNLLALIPLMLYDSNPR-STEAATKYFLTQATASMMLLLSILINFKQLGLW--TFQPETSDTIMTITFISLAIKLGLAPFHSWLPEVTQGIKLDVGLILLTWQKIAPLSILSQFYELMNPNLLILS-AIISVMVGAWNGLNQTQTRKIMAYSSIAHMGWMISILPYNPSLTTLNLLIYIMMTIPMFFILHTHSFTSITSM---SLMWNKMPMALPMISLILLSTGGLPPLTGFLPKWAIITELMMNNNLSLAALMAMTALINLFFYTRLIYSTSLTTFPSNNNSKMFI-HQNYMKNNNML-------TPMMVISTMVLPLSPLLL------MN-TMLILLVNITLAMALISVAFWLPHLNIYTEKANPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQFPSMKTPVTMAFTLITILALGLAYEWTQKG--LEWTE-MTPAVINVSLAFAFSLLGTLVFRAHLMSTLLCLEGMMLSLFILATITPLNTHSMIMFPIPIIILVFAACEAAVGLALLAKISNTYGSDFVHNLNLLQCMLKIIFPSVMLLPLTWLSNNKKVWMNVTAYSLLINLISI-NILWQNNENNLSFS-TMFSADPLSAPLLVLTTWLLPLMLLASQNHIKKEPEYNKKLYISLLVCLQILLIMTFSANELIMFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLVGSIPLLIALIYIQNLMGTLNFALMTLYNSPMN-QTW-----SNNMLWLACIMAFMVKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRISTILDP-VTKYMAYPFILLSLWGMIMTS--SVCLRQTDLKSLIAYSSVSHMALVITAIMIQTPWSFMGATTLMVAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMVFPLMATWWIMASLANLALPPTINLIGELMITTSMFSWSNPSIILLGTNILITSLYSIYMIVTTQRGKLTNHMNNLQPTHTRESTLMALHILPLILLTINPKLILGPTL------MNIITTS-IFLILALLVFPMAIS---FSNVAKH-MDFPNYVTSC-IKSAFFISLIPLSSFFNSGAELMITNWQWVTIGSIKLSLSLKFDFFSIVFLPVALYVTWSIMEFSVWYMHSDPNLNRFIKYLLTFLITMIILTTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGLIMAMAWFCTKTNSWELQQIFAT-DN-PNTIPLSGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLISNNNTILTAMLCLGAMTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPHLAFLHICTHAFFKAMLFMCAGAIIHSLNDEQDIRKMGGLAKTMPFTSSCLTIGSLALTGMPFLTGFYSKDLIIEAANTCYTNAWALSITLVATS-MTAVYSMRIIYFVVMTKPRFPATIMINENNPLLMNPIKRLALGSILAGFFISYNIPPTTVQVMTMPWYLKITALMITIAGFAIALDLNKITNNLS--PTKPLPTNSFSTSLGYFPTIMHRLLPLKSLNTSFKTALAMLDLIWLEKAIPKATSAMHTFTSS--ALSNQKGMVKLYFLS---FLITL--ICIPLILLT---------------- +>Tragelaphus_spekii_Sitatunga +----MNENLFASFITPM-ILGLPLVILVVLFPSLLFPTSD-RLVNNRLISLQQWALKLVSKQMMTIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTAFITFIILILLTILEFAVAMIQAYVFTLLVSLYLHNNTMPQLDTSTWLTMIMSMF-LTLFIIFQLKISKHNFYH-NPEPT-TTKVLKQ-NTP-W-ETKWTKTYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPVYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTPELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLEYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMILLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLDPLEVPLLNTSVLLASGVSITWAHHSLMEGHRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGTTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG---MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGMYYGSYTFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGALLLILTLMILVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHVSKQRSMMFRPLSQCLFWILAADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVLMPATSMIENNFL---KW--------MF--------MINTLMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSASMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSMPILLAGI-P-PQT--MNP-IIFTTITLTIMLGTIIVMISSHWLFIWIGFEMNMLAIIPIMMKNHTPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPVASMIMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPAMTLLNLTIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPIMTVLVLVTLLSMGGLPPLSGFIPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLAYTTALTMFPSTNNMKMKW-QFPITKRMTLL-------PTMVVLSTMLLPLTPMLLILE---MN-LMMALLTNFSLATLLVIIAFWLPQLNPYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMAALTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTTMLMPLTWLSKNNMIWINPTMHSLLISLTSL-LLMNQFGDNSLNFS-PTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLVLLQLFLIMTFTAMELILFYILFEATLIPTLIIITRWGSQTERLNAGLYFLFYTLAGSLPLLVALLYIQKTVGTLNFLVLQYWVQPVS-SSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRVTLFLNP-TTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVVSAFSWSNMTIILMGTNMVITALYSLYMLTMTQRGKHTHHINNISPSFTRENALMSLHMIPLLLLSLNPKIILGPLY------MNMLSSF-TLITLLLLTMPVVMT---SSNIYKT-PNYPLYVKTT-ISYAFFTSTIPMMMFIHTGQETIISNWHWLTIQTLKLSTSFKMDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLINLNAWDLQQIFMLNPS-NSNMPLLGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSTMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGVPFLTGFYSKDLIIETANTSYTNAWALLLTLIATS-FTAIYSTRIIFFALLGQPRFPTLVVINENNPLLINSIKRLLIGSLFAGFIISNSMPPMTVPQMTMPFYLKTTALMVTILGFILALEISNMTQNLK--LYHPSNSFKFSNMLGYFPTIIHRLIPYANLTMSQKSASSLLDLIWLENILPKTISLTQMKMSI--MVTNQKGLIKLYFLS---FLITI--LISMILF----------NFHE---- +>Camelus_bactrianus_Bactrian_camel +----MNENLFASFITPT-VMGLPIVILIIMFPSMLFPAPF-RLINNRLISLQYWLIRLTSKQMMTIHNHKGQTWSLMLMSLIMFIGTTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLALMS-INTPTALITFIVLILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSML-MTLFVLFQLKISKHMYLS-APSPK-SNKTRKQ-KTP-W-ETKWTKIYLP-LS-LPQQ----MFITRWLFSTNHKDIGTLYLLFGAWAGMVGMGLSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFMHWFPLFSGYTIDDTWAKIQFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSVGSFISLTAVVLMVFIVWEAFASKREVTTVELTATNLEWLHGCPPPYHTFEEPTYINL-K--------MPYPFQLGFQDATSPIMEELLYFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPVLTVKTIGHQWYWSYEYTDYETLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLVTSEDVLHSWAVPSLGLKTDAVPGRLNQITLMSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFEEWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSSVLLLLGLVTNMLTMYQWWRDVVRESTFQGHHTPAVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRAHMLQALFITIALGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLTVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLLKIMNDAFIDLPAPSNISSWWNFGSLLGVCLIMQILTGLFLAMHYTSDTTTAFFSVAHICRDVNYGWIIRYLHANGASMFFICLYIHVGRGLYYGSYTFLETWNVGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVAVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGALLLMLILLILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALIPMLHTSKQRSMMFRPISQCLFWVLVADLLTLTWIGGQPVEPPFIMIGQVASILYFSLILILMPVAGIIENRIL---KW--------MF--------MVNTLTLIVPILLAMAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAIKLFTKEPLRPATSSVTMFIIAPVLALTLALTMWIPLPMPHPLINMNLGVLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHMWMIVPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFMAEYANIIMMNAFTTILFFGAFHNPYMPELYTVNFVAKTLLLTATFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPISTAGI-P-PQT--MNP-LILGIILLTIMAGTLIVMISSHWLFIWIGFEMNMLATIPILMKNFSPR-SIEASTKYFLTQATASMLLMLGVIINLLYSGQW--TTTKMFNQTSSIIITTALTMKLGLAPFHFWVPEVTQGIPLMSGLILLTWQKLAPLSVLYQIAPSINLNMLLTM-SLLSIMVGGWGGLNQTQLRKIMAYSSIGHMGWMTAIMVYNPTMAMLYLLMYLTMTLTMFMLFMINSTTTLLSL---SHTWNKTPIITMIVLTVMMSMGGLPPLSGFMPKWMIIQELTKNDNIILPTLMAMMALLNLYFYMRLAYSTALTMFPSSNNMKMKW-QFEGTKRMTSL-------PIMIVLSTMILPLTPMLSVLY--MIN-LMLALFTNTALASLLVLIAFWLPQLYIYAEKTGPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWATQTNYLYIMLTMALLLILLLAASLAYEWTQGG--LEWTE-MSMVYMNIILAFTMSLAGLLMYRSHLMSSLLCLEGMMLSLFVMASLMILNNHFTLASVMPIILLVFAACEAALGLALLVMVSNTYGTDYVQNLNLLQCMLKIIFPSIMLMPLTWLSKNNMIWINPTVYSLLISLISL-STLNQYSDNSTNFS-LLFFSDSLSAPLLVLTTWLLPLMLIASQSHLSKEPLTRKKVYITMLILLQVLLIMTFTASELIMFYVLFEATLVPTLIIITRWGSQAERLNAGSYFLFYTLSGSLPLLVALVYIQNTTGSLNFLIMQYWNQPLM-DSW-----SNALLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTTMLNP-LTEYMAYPFLMLSLWGMIMTS--SICLRQTDLKALIAYSSVSHMALVIVAILIQTPWSYMGATTLMVAHGLTSSMLFCLANTNYERTHSRTMILARGLQTLLPLMAMWWLLASLANLALPPTINLLGELFVVMSAFSWSNITIILMGANMMITALYSLYMLIMTQRGKHTHHINNIKPTYTRENSLMALHMLPLLMLSLNPKIIMGLTY------MNMFATF-TLLTLFMLTLPILMT---ASNTYNN-NQYPMYVKNI-IACSFAVSLVPTMMFIHSNQEMVISNWHWMTVHTLKISLSFKMDYFSMMFMPIALFVTWSIVEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVASMAWFLSNLNAWELQQIFALTQN-CPTAPLMGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNKTAQTLTLCLGAITTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIVGSLALTGIPFLTGFYSKDMIIETANTSYTNAWALFITLIATS-LTAVYSTRIIFYALLNQPRFPPLILINENNPLLINSIKRLLVGSIFAGFLISYNIPPMTLPQMTMPLHLKLTALAVTILGFMLAMEINTMTQNLK--HTRPSKTFKFSNSLGFFPTIMHRLVPYLSLLMSQKSASMLLDLLWLEAALPKTIALIQVKASM--LVSDQKGLIKLYFLS---FLVTL--TLIAILF----------NYPA---- +>Papio_ursinus_Chacma_baboon +----MNENLFASFSAPT-ILGQPAAIPIIMLPTQLIPTSK-YLINNQLTTIQQNLIKLTLKQMMAPHNAKGQSWSLMLTSLITFITMTNLLGLLPHSFTPTTQLSMNLAMAIPLWTGTIITGLRFKTKNSLAHMLPQGTPTPLIPMLVMIETISLLIQPMALAVRLTANITAGHLLMHLIGNTMLTLST-INLPATLLTSVLLTLLTILEIAVALIQAYVFTLLVNLYLRNNTMPQLDTSTWFTIIMAML-PTLYLITQLKLLSMNYYQ-PPLTK-NPNLQTR-NTC-W-RPKWTKIYSP-HS-QPQQS---MLINRWLFSTNHKDIGTLYLLFGAWAGVTGMALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTVVEAGAGTGWTVYPPLSGNYSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGVISHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTMGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLNQTCAKAHFIITFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSFISLTATILMIYMIWEAFASKRKVLLTEHPSTSLEWLNGCPPPHHTFEEPAYIKL-SEKGGSRTPMAHPVQLGLQDATSPVMEELITFHDQALMAMFLISFLILYALSSTLTTKLTNTNITDAQEMETIWTILPAIILILIALPSLRILYMTDEVNNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQLHAYHMVKPSPWPLTGALSAFLLTSGLIMWFHFYSTALLTLGLLTNALTMYQWWRDIIRESTFQGHHTMPVQKGLRYGMALFIISEVFFFAGFFWAFYHSSLAPTPRLGCHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHTLMNSSRKQTIQALLITILLGTYFTLLQISEYSEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLLICLIRQLFYYFTPSHHFGFEAAAWYWHFVDVIWLFLYISIYWWGS--MTSMRKSNPIMKMINRSFIDLPAPSNISIWWNFGSLLATCLILQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWTIRYLHANGASMLFICLFLHVGRSLYYGSYLLLKTWNIGITLLLMTMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTNLVQWVWGGPAIDNPTLMRFFTLHFTLPFGIVALTAVHLLFLHETGSNNPCGISSDSDKITFHPYYTIKDILGVALLLLALMTLTLFSPNLLNDPDNYTPADPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALFLSILILAITPMLHKSKQQSMMFRPLSQFLFWFLVTTLLTLTWIGSQPVIQPLTTIGQVASMMYFLTILILMPLAAQVENNLL---KWT-------MT--------TMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSSTILYITAPALAFSIALLLWTPLPMPNPLINFNLGLLFILATSSLTVYSILWSGWASNSNYALIGALRAVAQMISYEVTLSIILLSILLTSGSFNLNMLITTQEHLWLILPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSCFNIEYSAGPFALFFMAEYMNIIMMNALTTTIFLGTFYPTHSPELFTTFFTIKTLLLTSLFLWIRAAYPRFRYDQLMHLLWKSFLPLTLALLMWSTSMPIAISSI-P-PQT--MNP-LAQLIIYTTVITGTLITMLSSHWFLAWAGLEMNMLAFTPTLIKKTNAR-STEAATKYFLAQSTASMILMMAIISNNLLSGHW-TTTTNCTNQLPSLAMTIALTMKLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQIHPSINTHILLTL-STLSIAVGSWGGLNQTQLRKILGYSSITHTGWMMTTLTYNPTITTLYLITYIILTTTMFLTLNLNSSTTTLML---SNTWNKSTHLMPLMTSTLLSLGGLPPLTGFLPKWITIQELTMNNDFITPTIMIALTLLNLYFYMRLIYTISLTLLPTPNNTKMMW-RLENTKPTLLI-------PTLTTISTLLLPISPLILSIP---MN-LMLTLMINTLLTSLLTMIMFWLPQLNSYAEKANPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWALQTTNLSTMIKTSIMFIIILTLSLAYEWTQKG--LDWTE-MTPTHMNITLAFTISLLGMLIYRSHLMASLLCLEGMMMSLFIMTATMASNAHFPLANIMPIIMLVFAACEAAVGLALLISISNTYGLDHINNLSLLQCMLKMVIPTTMLLPTTWLSKSNTIWINLTAHSLTISLIPL-LFFNQTDNNLLSYS-THLSSDPLATPLLTLTAWLLPLMIMASQYHLHNKPPSQKKLYLSMMIFLQITLILTFMATELIMFYILFETTLIPTLIIITKWGNQAERLNAGSYFLFYTLTGSLPLLIMLIYTYNKTGSLNITLLTLTDQKLT-TTW-----SHNLTWLACMMAFMTKLPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIVASLIQTPWSFSGATILMIAHGLTSSMYFCLANSNYERTHSRIMLLSRGLQILLPLMTFWWLMTSLTNLALPPTINLIGELFVIAASFSWSKITIILTGLNMLITALYSLHMFTTMQRGALTHHTINMKPPFTRENTLMFLHLAPTILLSLNPNTIPGPTP--------MCTSI-MLMTLTSLALPIFAT---LVNPNKT-HLYPNYVKTT-MMYAFITSLIPTTLYIFSNQETTIWSWHWMVTQTLDLTLSFKLDYFSMMFIPIALFITWSIMEFSLWYMSSDPNINQFFKYLLIFLITMLTLVTANNLFQLFIGWEGVGIMSFLLISWWHARTDANTAAIQAVLYNRIGDVGLILAMVWFLLHYNSWDFQQMLALNPH-PNLLPLMGLLLAAVGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNTLIQNLTLCLGAITTLFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFICSGSIIHSLNNEQDIRKMGGLFKTMPLTSTSLIIGNLALMGMPFLTGFYSKDLIIEATSTSYTNAWALSITLIATS-LTSAYSTRTILLALTGQPRLPTLMNINENNPALLNPIKRLTTASMIAGFLITNNIPPASLPQPTMPLYLKLSALYMTVLGFITALDLTLMTNKLK--VKTPPQTFKFSNMLGYFPIIAHRAIPHQNLLMSQNLALLLLDSMWLEKSMPKMISQTHTTAST--TVTAQKGMIKLYSLS---FLIPL--TLALLLMV----------------- +>Tursiops_australis_Burrunan_dolphin +----MNENLFASFMVPV-MLGFPITTLIIMFPTMLFPTPN-RLINNRMIAIQQWLTKLTSKQLMITHSPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNLGMAIPLWAGTVFIGFRNKTKMSLAHLLPLGTPTFLIPMLVMIETISLFIQPLALAVRLTANITAGHLLLHLIGSATLALMS-ISLFTALITFIILTLLIILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMI-LALFALLQLKISKHFYSP-SPKPV-NTKLQKQ-QTP-W-NHTWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQLYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWTKIQFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFEEPVYINL-KYS------MAYPFQLGLQDAASPVMEELLQFHDHALMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTVLPALILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMVLPMQMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSMILLTLSFLTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIMLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MNNIRKTHPLMKILNDAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWFIRYLHANGASMFFICLYAHIGRGLYYGSYMFQETWNIGVLLLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAAVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTTKDILGALLLILTLLALTLFTPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLIFIPMLQTSKQRSMMFRPFSQLLFWTLIADLLTLTWIGGQPVEHPYIIVGQLASILYFLLILVLMPTAGLIENKLL---KW--------MF--------MINILTLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFMIAPVLALALALTMWAPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLNTTQEKVWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGAFHDPYMPELCTTNLVVKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMAAGI-P-PQT--MNP-FISITLLTTLILSTTIVTISSHWLFAWIGLEMNMMAIIPIMMKKPNPR-ATEASAKYFLTQATASSLLMLAIIINLMHSSQW--TIMKLFDPTASILMTMALAIKLGLSPFHFWVPEVTQGIPLSTGLILLTWQKLAPISILYQISPSINLHLMITM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILLYNPTLTLLNLLIYIVMTFTMFMLLIQNSTTTTLLL---SQTWNTMPIMTTFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPTLMATTALLNLYFYMRLTYSTALTLFPSTNNMKMKW-QFYPTKQMTLL-------PTAIVLSTMLLPLTPTLFILL---MN-LLLTLLTNTTLALLLMLIAFWLPQLNTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLTTMLFMALFLISLLAASLAYEWTQKG--LEWDK-MSLVHINILVAFTVSLTGLLMYRSHLMSALLCLEGMVLSLFILATLTILNAHFTLANMMPIVLLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKSNFIWINTTTHSLLISFTSL-LLLNQFNDNSLNYS-LMFFSDPLSAPLLMLTMWLLPLMLMASQSHLLKEPLTRKKLYITMLVMLQVLLIMTFTAMELIMFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALTYLQNTVGSLNFLLLQYWTQPLS-TSW-----SNTFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTEHMAYPFLALSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFFPLMATWWLLACLTNLALPPTINLIGELLVIMSTFSWSNLTIILMGANIVITALYSLYMLIMTQRGKHTHHINNLTPTFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSS-TLLTLLMLMAPIMAS---STDFYKN-NKYQHYVKNM-TLLAFITSLVPMTMFIHTNQEVLISNWHWMTIHTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPHINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLHNTNAWDLQQIFTLNQN-PPILPLAGITLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVMAGIFLLIRFYPLTENNKFIQTMMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALIIGCFALTGMPFLTGFYSKDLIIEAATSSYTNAWALLLTLIATS-MTAIYSTRIIFFTLLEQPRFPPLMNINENNPMLINPIKRLLIGSIFAGFILSNSMPPMNIPLMTMPLYLKLTALMVTILGFILAFEINNYSKNLK--YPYSSDSTKFSTLLGYFPTIMHRLPPHLVLTMSQKFATSLLDLTWTETILPKTTALIQLKAST--LTSNQKGLIKLYFLS---FLITM--ILSMLLF----------NYPE---- +>Addax_nasomaculatus_ +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWMLQLVSKQMMSIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTAFITFIVLILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQMKIAKHNFYY-NPELA-SMGTPKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNMTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPAYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNVGVILLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDTDKIPFHPYYTIKDILGALLLILVLMLLVLFTPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLVPALHTSKQRSMMFRPISQCIFWILVADLLTLTWIGGQPVEHPYIIIGQLASITYFLLILVLMPVASTIENNLL---KW--------MF--------MVNILMLIIPILLAVAFLTLVERKILGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQTWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPILLSSI-P-PQT--MNP-IIFIIILMTIMFGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNSTASMLMTMALAMKLGMAPFHFWVPEVTQGISLSSGLILLTWQKLAPMSVLYQISPSINLNLIMTL-SVLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLIIYIIMTSTMFSLFMANSTTTTLSL---AHTWNKAPIMTALALITLLSMGGLPPLSGFMPKWMIIQELTKNNSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFFTTKQMTLL-------PTMVILSTMMLPLTPILSTLE---MN-LMMALLTNLTLTTLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVHMNIMVAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIVPTAMLMPLTWLSKNNMIWVNPTLHSLLISLTSL-LLMNQFNDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFISMLILLQLFLIMTFTAAELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALMHVQNTVGSLNFLILQYWVQPMP-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLILNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKHTHHINSISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-ALMTLLLLTVPIMMT---SSSTRKT-PNYPFYVKTT-VSCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSILEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLEPN-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLIQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFMTLININENNPFLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPHYLKLTALMVTILGFILALEISNMTHNLK--FNYPSNTFKFSNLLGYYPTIMHRLTPHMSLTMSQKSASSLLDLIWLENILPKTISSTQMKMST--MITNQKGLIKLYFLS---FLITI--LTSTVLL----------NFHE---- +>Cercopithecus_mitis_blue_monkey +----MNENLFTLFATPT-ILNQPATIPIILSPMLLIPTSK-YLINNRLITIQHSLTQLTLKQMMINHNTKGQTWSLMLVSLITFITMTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVITGLRFKTKNSLAHLLPQGTPTLLIPMLVMIETTSLLIQPVALAVRLTANITAGHLLMHLVGNAMLALLT-INLPIALLTSMLLMLLTTLEIAVALIQAYVFTLLVSLYLHNNTMPQLDTSTWFITITTML-PTLYLITQLKLLSTGYYK-PPSQK-NPNKQTP-NNH-W-QLKWTKIYLL-YS-QPQRF---MLINRWLFSTNHKDIGTLYLLFGAWAGIMGTALSLLIRAELGQPGSLFGSDHIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTVVEAGAGTGWTVYPPLAGNLSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPTGGGDPILYQHLFWFFGHPEVYILILPGFGMVSHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNINWSPAMLWALGFIFLFTMGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKAQFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSFISLVAVALMIYMIWEAFASKRKALAIKQPSTSLEWLNGCPPPYHTFEEPAYIKL-NEKGESRTPMAHPVQLGLQDATSPVMEELITFHDYALMTISLISFLVLYALSSTLTTKLTNTNITDAQEMETIWTILPAIILILIALPSLRILYLADEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFAL----------MTHQSHAYHMVKPSPWPLTGALSALLVMSGLIMWFHFYSTTLLMLGLLTTSLTLHQWWRDIVRESTYQGHHTTPVQKNLRYGMALFIISEIFFFTGFFWAFYHSSLAPTPHLGGHWPPTGIVPLNPLEVPLLNTSVLLASGVTITWAHHSLMNNNRKQTTQALLITILLGIYFTLLQVSEYFEAPFTISDGIYGSTFFITTGFHGLHVIIGSTFLLICLIRQLLYHFTSSHHFGFEAAAWYWHFVDVVWLLLYISIYWWGS--MIPTRKSNPIMKMINHSFIDLPSPSNISTWWNFGSLLGFCLILQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWVIRYLHANGASTFFICLFLHVGRGFYYGSFLLPKTWNTGIMLLLMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWIWGGYSIGSPTLSRFFTLHFIMPFIITALTIVHLLFLHETGSNNPCGISSDSDKITFHPYYTTKDILGLVLLLLILATLTLLSPDLLNDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALFLSILILAIVPMLHKSKQQSMMFRPLSQLLFWLLVTTLLTLTWIGSQPVSQPFIIIGQMASMMYFITILILMPLTSLIENELL---KWT-------MT--------TTNLLLLITSALAAMAFLTLVERKLLGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPSASTTTLYTIAPALAFSIALLLWTPLPMPNPLINFNLGLLFILAMSSLIVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLTMLITTQEHLWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFLGTFYPTHSPELFTTCFVTKTLLLTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLASLMWNISAPITASSI-P-PQT--MNP-LAQLIIYTTMITGTLTTLLSSHWFLAWAGLEMNMLAFIPILIKKTNLR-STEAATKYFLMQSTASMILMVAIIFNNLSSGHW--TMTSSIHQFPSLMMTTALAMKLGMAPFHFWIPEVTQGTPLIPGLLLLTWQKLAPTSIMCQIHPSINTHALLIL-STLSIIMGSWGGLNQTQLRKIMGYSSITHMGWMMTTLTYNPTITILYLTIYVTLTTTMFLILNLNSNTTTLTL---SLTWNKSAWLMPLTTSTLMSLGGLPPLTGFLPKWITIQELTMNNNFIIPFIMVTMTLLNLYFYMRLIYNTSVTLLPTPNNTKMKW-QLENTKPTLFI-------PTLTIISTLLLPIAPLILTTP---MN-LMLALTINTLLTSLLMIIMFWLPQLNSYAEKTNPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWALQTTNIPTMIKSSITLIIILTLSLAYEWTQKG--LDWVE-MSPIFMNTTLAFTISLLGMLVYRSHLMASLLCLEGMMMALFIMTALVASNMHASLTNIMPIMLLVFAACETAVGLALLISISNMYGLDHIHNLSLLQCMLKMIIPTTMLLPMTWLSKNDTIWINLTLHGLTISLIPL-LFFNQTNSNLLNHS-IYLSSDPLTTPLLTMTAWLLPLMTMASQHHLHNKPPTQKKLYLSTMIFLQITLILTFMATELILFYILFETTLIPTLIIITKWGNQAERLNASTYFLFYTLTGSLPLLIMLIHTYNNVGSLNITLLTLTGQKLT-TTW-----SHNLAWLACMMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSITNP-LTEQMAYPFLTLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMSLVIMASLIQTPWSFSGATVLMIAHGLTSPMLFCLANSNYERTHSRTMMLSRGLQTLLPLMTFWWFAANLTNLALPPTINLVGELFVITASFSWSHTTIVLTGLNMLITALYSLHMFTTLQRGKFTHHTINMKPSFTRENTLMFMHLAPIILLSLNPSIILGFTP------MTMCTPI-MMTTLTSLTLPIIAT---LINPNKK-QFYPNYVKTT-MMYAFITSLLPTTLYLSLNQESTIWSWHWMMTQTLDLTLSFKLDYFSVMFTPIALFITWSIMEFSLWYMNSDPNINQFFKYLLIFLIAMLTLTTANNLFQLFVGWEGVGIMSFLLISWWYSRTDANTAAIQAILYNRIGDIGLILAMVWFLLHYNSWDIQQMLTLNSN-SNPLPLMGLLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVYLLIRFHPLMENNTPIQSLTLCLGAITTTFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLLIGNLALTGMPFLTGFYSKDLIIEATNTSYTNAWALLITLIATS-LTSAYSTRTILLTITGPPRFPVLMNINENNPTLLNPIKRLTMGSIIVGFLITNNIPPTSLPQPTMPHYLKFSALYTTVLGLLMTLDLTLMTNKLK--MNNPSQMFKFSNLLGHFPATIHRMIPYQNLLMSQNLALLLLDSMWLEKSMPKMITHTHTTASK--TVTTQKGMIKLYSLS---FLIPL--TLTLLLTM----------------- +>Alcelaphus_buselaphus_hartebeest +----MNENLFASFITPM-VLGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWVLQLVSKQMMSIHNTKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKVSKHNFYH-NPELA-PTKTLKQ-NIP-W-ESKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDVSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNLLTMYQWWRDIIRESTFQGHHTSPVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYAFLETWNVGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTLSILILVLVPLLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPMASTIENNLL---KW--------MF--------MLNILMLIIPVLLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTMKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPVLLSSI-P-PQT--MNP-IIFIIILMTVMLGTVIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLAQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGISLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYVIMTSTMFTLFMANSTTTTLSL---SHTWNKAPIMTALVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMILL-------PTMIVMSTMLLPLTPMLSILE---MN-LMMALLTNLMLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLPTMLTMALLLIFLLAASLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINPTLHSLLISLTSL-LLMNQFGDSSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLIRKKLFISMLILLQLFLIMTFTAAELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALVYIQNTMGSLNFLILQYWVQPMA-NSW-----SNVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTDFMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGLLY------MNMFSSL-TLTTLLLLTIPIAMT---SSSTYKN-PNYPYYVKTA-ISYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLANLNTWDLQQIFMLEPT-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLVATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPHYLKMTALAVTILGFILALEISNMTYNLK--FNYPSSPFKFSNQLGYYPTIMHRLTPHMNLTMSQKSASSLLDLIWLENILPKTTSLIQMKMST--MVTNQKGLIKLYFLS---FLITI--LISMTLL----------NFHE---- +>Mandrillus_sphinx_mandrill +----MNENLFTLFSTPT-VLGQPATIPIILFPMLLIPTSK-YLINNRLTTIQQNLTQFTLKQMMMTHNTKGQTWSLMLMSLIIFITMTNLLGLLPYSFTPTTQLSMNLAMAIPLWAGTVVTGLRLKTKSSLAHLLPQGTPTQLIPMLVVIETISLLIQPVALAVRLTANITAGHLLMHLTGNAALALST-ISSPATLLTFTLLMLLTILEIAVALIQAYVFTLLISLYLHNNTMPQLDTSTWFITITTML-PTLYLIMQLKLLNMNYYR-PPLTK-NPNLQIH-NNY-Q-QSKWTKIYLP-YS-QLQQC---MFIDRWLFSTNHKDIGTLYLLFGAWAGVMGTALSLLIRAELGQPGSLLGNDHIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTMLEAGAGTGWTVYPPLAGNLSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPIGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGANIKWSPAMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTCAKVHFTIMFMGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSYISLVAVILMIYMIWEAFTSKRKVLLIEQPSTNLEWLNGCPPPHHTFEEPAYIKL-NEKGESRTPMAHPAQLGLQDATSPVMEELITFHDHALMAMSLISLLVLYALFSTLTTKLTNTNITDAQEMETIWTILPAIILVLIAFPSLRILYLTDEVNNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVLTL----------MTHQLHAYHMVKPSPWPLTGALSALLMTSGLIMWLHFYSTALLMLGLLTNSLTLYQWWRDIVRESTYQGHHTMSVQKGLRYGMTLFIISEVFFFMGFFWAFYHSSLAPTPRLGGYWPPTGIIPLNPLEVPLLNTSVLLASGVTITWAHHSLMSSNRKQTIQALFITISLGIYFTLLQISEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLFVCLIRQLLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MISMRKSNPIMKMVNRSLIDLPTPSNISMWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWTIRYLHANGASMLFICLFLHVGRGLYYGSYLLLKTWNIGITLLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTNIVQWIWGGHAIGNPTLTRFFTLHFILPFIIIALTAVHLLFLHETGSNNPCGIPSDSDKITFHPYFTIKDILGLALLLPILMTLVLFSPDLLSDPDNYTPANPLITPLHIKPEWYFLFAYTILRSIPNKLGGVLALLLSILILMIIPMLHKSKQQSMMFRPLSQLLFWLLTTTLLTLTWIGSQPMVQPLITIGQMASAMYFITILILMPLTSLIENNLL---KWT-------MT--------TMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPSTSTAILYTTAPALAFSIALLLWTPLPMPNALVNFNLGLLFILATSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLNMLITTQEYLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFLGTFYPIHLPELFTACFTTKTLLMTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLALLMWNTSMPITISSI-P-PQT--MNP-LAQLIIHTTVIMGTLITMLSSHWFLAWTGLEMNMLAFIPILIKKTNLR-STEATTKYFLMQSTAAMILMMGIISNTLLSGHW--MMTNYASQLPSLMMTIAIAMKLGMTPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQIHMSINTHILLTL-STLSIMVGSWGGLNQTQLRKILGYSSITHTGWTMMTLTYNPTITILYLIVYIILTTTMFLTLNLNSNTTTLML---SHTWNKSTHLTPPMTFTLLSLGGLPPLTGFLPKWITIQELTMNDNFLVPSIMITMTLLNLYFYMRLIYAISLTLFPTTNNTKMTW-QFENTKPMLLI-------SPLIITSTLLLPISPMILAIH---MN-LMLALMINTLLTLLLTIIMLWLPQLNSYAEKTNPYECGFDPLNPARTPFSMKFFLVAITFLLFDLEIALLLSLPWALQTTNLPTMIKSSMAFIIILILSLAYEWVQKG--LDWTE-MIPIYMSIALAFTISLLGMLTYRSHLMTSLLCLEGMMMSLFMMMTLIATNTHSPLINIMPIILLVFAACEAAVGLALLISISNTHGLDYIQNLNLLQCMLKMIIPTTMLLPITWLSKNNTIWINLTMHSLIISLIPL-LFFNQTNNNLFSHS-TYLSSDPLTTPLLMLTAWLLPLMIMASQYHLHSETPSQKKLYLSMMIFLQITLTLTFMATELIMFYILFETTLIPTLIIITKWGNQAKRINASTYFLFYTLTGSLPLLIMLIYTHNNTGSLNIMLLTLTNQKLT-TTW-----SHSLTWLACVMAFMTKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRLTSILNP-LTEYMAYPFLMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIMATLIQTPWSFSGAIILMIAHGLTSSMYFCLANSNYERTHSRIMLLSRGLQILFPLMTFWWFMANLTNLALPPTINLLGELFTIAASFSWSHITITLMGLNMLITALYSLHMFITMQRGTLAHHMTNMKPPFTRENTLMLMHLAPIILLSLNPSIIMGFTP------MNMPASI-TMTTLTSLALPILAT---LINPNKK-RSYPNYVKTT-VMYAFITSLLPTTLYIFSNQETIIWSWHWMMTQTLDLTLSFKLDYFSMMFIPIALFITWSIMEFSLWYMKSDPNINQFFKYLLIFLTAMLILVTANNLFQLFIGWEGVGIMSFLLISWWHTRTDANTAAIQAILYNRIGDIGLILAMTWFLLHYNSWDFQQMLALNSN-SNLLPLTGLLLAAMGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNMLIQNLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLTIGNLALTGMPFLTGFYSKDLIIEATNTSYTNAWALFTTLIATS-LTSAYSTRTIILTLTGQPRFPALTNINENHPALLNPIKRLTMGSMITGFLITNSIPPTSLPQPTMPLHLKLSALYATALGFLMALDLTLMTNNQK--MKNPSQMFKFSNMLGYYPTTIHRMIPYQNLLTSQNLALLLLDSTWLEKSMPKMISQTHITAST--TVTPQKGMIKLYFLS---FLIPL--ILTMLLMT----------------- +>Phocarctos_hookeri_Hookers_sea_lion +----MNENLFTSFASPA-MMGLPIVTLIILFPSILFPSPS-RLVNNRFTSIQQWLIQLTSKQMMLIHNHKGQTWTLMLMSLITFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVIMGLRHKTKASLAHFLPQGTPSPLIPMLVIIESISLLIQPMALAVRLTANITAGHLLIHLIGGATLALTN-ISMITALITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTIMSMI-LTLFIVFQLKISKHHFPM-SPESK-PLSASKT-NIP-W-EKKWTKIYSP-LS-LPLQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSLVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRDLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFMLDSTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFMIWEAFASKREVETIELTSTNMEWLHGCPPPYHTFEEPTYIVS-K--------MAYPFQMGLQDATSPIMEELTHFHDHTLMIVFLISSLVLYIISTMLTTKLTHTSTMDAQEVETVWTILPAIILIMIALPSLRILYIMDEINNPSLTVKTMGHQWYWTYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVIESVPLSCFEKWSASMLQ---------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSIHLLLLGLMTNTLTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPAGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITILLGLYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKMHPLAKIINNSLIDLPAPSNISAWWNFGSLLAVCLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTLTETWNIGIILLFTIMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFVASALVMVHLLFLHETGSNNPSGVSSDSDKIPFHPYYTIKDILGTLLLILILMLLVMFSPDMLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPMLHTSKQRGMMFRPISQCLFWLLVTDLLTLTWIGGQPVEHPFIIIGQLASILYFTILLILMPIAGIIENKIL---KW--------MT--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPFGLLQPIADAVKLFTKEPLRPLTSSASMFITAPILALTLALTMWVPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTTLFLGAFHSPYMPELYTINFTLKTLTLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMTLPVITASI-P-PQT--MKP-PIFIMIMTTVVSGTMIVLTSSHWLMIWIGFEMNMLAIIPILMKNFSPR-ATEASTKYFLIQATASMLLMLGIIINLMTSGQW--TILKPPNPMTSNLLTIALTMKLGMAPFHFWVPEVTQGTPLSSGMILLTWQKIAPLSVLYQIAPSINPNLLITL-AIASVLVGGWGGLNQTQLRKILAYSSIAHMGWITIIMMYNPTLMLLNLMIYITMTLGTFMLFMYNSSTTTLSL---SHTWNKLPLMTSLILVLMLSLGGLPPLSGFVPKWLIIQELTKNDMIVLPMFMAITALLNLYFYMRLSYTTALTLFPSTNNMKMKW-QFENTKKMTLL-------TPLIIISTMMLPMTPMMSILD---MN-MMMALLTNTILASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHANNLTTTLTMALMLISLLAASLAYEWTEKG--LEWTE-MSMVYFNIFMAFTVSFVGLLMYRSHLMSSLLCLEGMMLSLFVMMSMTILNNHFTLANMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTIMLMPVTWMSKPHMIWINTTAYSLLISLASL-PLLSQLNDNSLNSS-LLFFTDSLSAPLLTLTTWLLPLMLMASQFHLSKEPLARKKLYITMLVLLQLFLIMTFAATELIMFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALLYVQNNMGTLNFLMVQYWTQTLP-NSW-----SNILLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-LTSFMAYPFMMLSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPLSYMGATALMIAHGLTSSMLFCLANSNYERTHSRIMILARGLQTLLPLMAAWWLLASLTNLALPPTINLVGELLVVMASFSWSNATIILMGVNIIITTLYSLYMLTTTQRGKHTHHIKNIKPSFTRENTLMMLHLMPLLLLSLNPKMILGPLY------MNLFTTF-IVTTLLMLTMPIILT---STPIYES-KLYPQYVKTI-ISYAFMTSMIPAMMFISSGQEMIISNWHWMTIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSIWYMSSDPYINRFFKYLLMFLITMMVLVTANNLFQLFIGWEGVGIMSFLLIGWWYGRSDANTAALQAILYNRIGDVGFIMAMAWFLTNLNTWDLQQIFMIHHN-DLSMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLPSSTMVVAGVFLLIRFHPLMEHNTTMQTITLCLGATTTLFTAMCALTQNDIKKIIAFSTSSQLG--LMIVTIGIGQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKPMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIEAANTSNTNAWALLLTLTATS-MTAAYSTRMMFYTLLGQPRFNSTITVNENNPLLINPIKRLLLGSIFAGYLMTLNIPPTMIPQLTMPHHLKLTALAVTLLGFTLALELSTASLDLK--FKHASDLSKFSNLLGYFPAIIHRFVPMVNLTASQKLASTLMDMTLLEYLLPKSISHLNMKSSI--TISNQKGLIKLYFLS---FMITL--TLALILMT--------ANSHE---- +>Thylamys_elegans_elegant_fat-tailed_opossum +----MNENLFAPFITPT-IMGITTLPLIILLPCVMLSSPK-RWLPNRIQILQIWLIRLITKQMMTMHNKQGRTWSLMLMSLILFIASTNLLGLLPYSFTPTTQLSMNIGMAIPLWAGTVIMGFRNKPKMSLAHFLPQGTPTPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALSS-ISMTVSTITFSILFLLTILELAVAMIQAYVFTLLVSLYLHDNSMPQLDTSTWSSIIVLMI-LSLFCLFQLKMINHTLIQVPSPNETTMT-SKT-SLP-W-ENKWTKIYLP-HS-SHQPL---MFINRWLFSTNHKDIGTLYLIFGAWAGMVGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYMLSDLWTKIHFFIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVLSSIGSFISLMAVILMVFIIWEAFASKREIMNVEMTTTNIEWLHGCPPSYHTFEQPVFIKI----------MPYPMQLGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYIIILMLSTNLTHTSTMDAQEVETIWTIMPAAILVLIALPSLRILYMMDEIYNPYLTVKAMGHQWYWSYEYTDYEDLTFDSYMVPTKDLAPGQLRLLEVDNRVVLPMELPIRMLISSEDVLHAWAVPSLGLKADAIPGRLNQITLTSSRPGVFYGQCSEICGSNHSFMPIVLEMTSLKYFEKWSSMMQS---------MTHQTHAYHMVNPSPWPLTGALSALLLTSGMIMWFHFNSTFLLIIGLTSMLLTMYQWWRDIIREGTFQGPHPPLVQKGLRYGMILFIVSEVFFFFGFFWAFYHSSLAPTHELGGCWPPTGINPLNPLEVPLLNTAILLASGVSITWAHHSLMEANRSQMIQALLITIMLGLYFTVLQAMEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIICLLRQLFFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKSHPLVKIINHSFIDLPAPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNFGWLIRNIHANGASMFFMCLFLHVGRGLYYGSYLFKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIILALVIVHLLFLHETGSNNPTGINPDSDKIPFHPYYTIKDILGLILMILLLLTLALFSPDVLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLLAIPLLHTSNQRSLMFRPISQTLFWLLTANLLILTWIGGQPVEQPFIIIGQMASISYFTIIIILMPLAGMLENYMLQ-PKYP-------MF--------MINLLLYIIPILLAVAFLTLIERKVLGYMQLRKGPNIIGPYGLLQPFADAVKLFTKEPLRPLTSSIIMYIIAPILALTIALTIWTPLPMPLTLMDLNLGLLFILSLSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKNLLITQENLWLITSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNGEYAAGPFAMFFLAEYANIIAMNAMTTILFLGTPMNPNYPYVNTMSFMIKTILLTAAFLWIRASYPRFRYDQLMYLLWKNFLPITLALCLWYISMPIALSSI-P-PQL--MSP-YVLTIITLSLLTGTLLTLMSNHWLMAWMGLEINTLTIIPLMTSSHHPR-NTESAIKYFMTQATASMIIMFSIIFNASMINQW--NITQICNQWASLLMTIALAMKLGLAPFHFWVPEVIQGITLLSGMMLLTWQKIAPVSILYQISPSLNMPLLMTL-SIMSTALGGWGGLNQTHLRKILAYSSIAHMGWMAIIILIMPSLTLLNLLIYFAATITLFMLLNFMNVTKINSL---SNLWNKSPTLVIIMTMTLLSLGGLPPLTGFMPKWLILKELITYNNIFLATMLALSALLNLFFYIRIIYSSTLTMFPSTNNSKLHW-TMTSKKPSSTI-------PSLTIISSMLLPLTPMFIILT--MMN-LIMVLLVNSTLATIVIVIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQLPTPYLMLFMSYCLILLLTTGLAYEWIQKG--LEWTE-MASINLNIIMAFIMALMGVLIYRSHLMSTLLCLEGMMLSLFILVTLLISQSHMLTTSMMPLILLVFSACEAGVGLALLVTISTTYGNDHVQNLNLLQCMLKILIPTLMLIPLTWYSKKPWMWINTTAYSLMISIISL-SLIYHNSDLSYNFN-SSFSMDSLSGPLLILSCWLLPLMIMASQNHLNKESLLRKKLYLTMLITLQLSLIMAFSSSELIMFYILFETTLIPTLIIITRWGNQNERLNAGIYFLFYTLIGSLPLLVALLNLNHNLGSLHILTNLIFTCQLD-NTM-----SNSLLWYACMIAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITMFTEP-ITKHLLYPFIILSLWGMIMTS--SICMRQTDLKSLIAYSSVSHMGLVIMAALMQSTISFMGATLLMIAHGLTSSLLFCLANSNYERIHTRTMIMARGLQLVLPLMCTWWLLASLANLALPPLINLTGELMVIISSFSWSNFSILILGINTVITALYSFYMLITSQRGKFTHHLTPISPSMTREHILMTLHILPLVMLSINPAYILGLTY------MNFILNSSSILTFTLLVFPILYN---LVFPYKT-KQFPLHCKNT-IMLAFLTSLLSFLTFILNGQESIITNWHWFSTHSFSISMSFKLDFFSIIFIPIALFVTWSILEFSLWYMHSDPNIFRFFKYLITFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWYGRTDANTAALQAILYNRIGDIGFMATMAWLMLNNNSWDLHHIFSINMS---TFALLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMLENNKTALDIILCLGAMTTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTVGLNQPYLAFMHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLFYSLPITSSALMTGSLALTGMPFLAGFYSKDSIIEALNMSYTNSWALTITLIATS-FTAVYSFRIIYYALMGYPRFPSISFINENNPNLINPIMRLATGSIFAGFILTSSIPPSSSISMTMPLMIKLSALIISLLGLYIGMELNFLSNKL---MNSNNHTTLFSSLLGYFSQILHRLPPLMNLFTGQRIATMLIDLDWYEKTGPKGQAYIHSTVSS-LLTMAQKGSMKTYFLT---FLISM--MLTLALI------------------ +>Homo_heidelbergensis_Heidelberg_man +----MNENLFTSFIAPT-ILGLPAAVLIILFPPLLIPTSK-YLINNRLITTQQWLIQLTSKQMMAMHNTXGRXXXXXXXXXIIFIATTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGXVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTANITAGHLLMHLIGSATLAMST-INXPXXXIIFTILILLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTTVXPTMXXXXL-LTLFLITQLKMLNTNYHL-PPSPK-PMKMKNY-NKP-W-EPKWTKICSL-HS-LPPQS---MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAXISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGSFISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS----------MAHAAQVGLQDATSPIMEELIIFHDHALMIIFLICFLVLYALFLTLTTKLTNTNISDAQEMETVWTILPAIILILIALPSLRILYMTDEVNDPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPVEAPIRMMITSQDVLHSWAVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPVFTL----------MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSTXXXXXXXXTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPXXXXXWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQLMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTPMRKINPLMKLINXSXIDLPTPSNISAWWNFGSLLGACLILQITTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYYGSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGYSVDSPTLTRFFTFHFILPFIIAALATLHLLFLHETGSNNPLGITSHSDKITFHPYYTIKDALGLFLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTILRSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGGQPVSYPFTIIGQVASVLYFTTILILMPTISLIENKML---KWA-------MP--------MANLLLLIAPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPSTSTITLYITAPTLALTIALLLWTPLPMPNPLVNLXLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLSTLITTQEHLWLLLPSWPLAMMWFISTLAETNRXPFDLAEGESELVSGFNIEYAAGPFALFFMAEYTNIIMMNTLTTTIFLGTTYNALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFRYDQLXHLLWKNFLPLTLALLMWYVSMPITISSI-P-PQT--MNP-LAQPXXXSTIFTGTLITALSSHWFFTWVGLEMNMLAFIPVLTKKMNPR-STEAAIKYFLTQATASMILLMAILFNNMLSGQW--TMTNTXXXXXSLMIMMAMAMKLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTL-SILSIMAGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIXLTTTAFLLLNLNSSTTTLLL---SRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTIMATITLLNLYFYLRLIYSTSITLLPMSNNVKMKW-QFEHTKPTPFL-------PTLIALTTLLLPISPFMLXXX---MN-FALILMINTLLAXLLMIITFWLPQLNGYMEKSTPYECGFDPMSPARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVTSSLLLIIILALSLAYEWLQXX--LDWAE-MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMATLMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLSLLQCMLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPL-LFFNQINSNLFSCS-PTFSSDPLTTPLLMLXTWLLPLTIMASQRHLSNEPLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALTYTHNTXGSLNILLLTLTAQELS-NSW-----ANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNP-LTKHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFSS------MTMXXXX-XXLTLTSLIPPILTT---LXNPNKK-NSYPHYVKSI-VASTFIISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFSLWYMSSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARADANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNAN-PSLTPLLGLLLAAAGKSAQLGLHPWLPSAXEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENSPLIQTLTLCLGAITTLFAAXCALTQNDIKKIVAFSTSSQLG--LMVVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETANMSYTNAWALSITLIATS-LTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLAAGSLFAGFLITNNISPASPFQTTIPLYLKLTALAITFLGLLTALDLNYLTNKLK--MKPPLYTFYFSNMLGFYPXITHRTIPYLALLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSI--ITSTQKGMIKLYFLS---FXFPL--ILTLLLIT----------------- +>Piliocolobus_badius_red_colobus +----MNENLFASFMMPT-ILGLPAVVPIIMFPALLFPTSK-HLISNRLITIQQNIIQMILKQIMTIHNTKGQTWSLMLMSLIIFIATTNLLGLLPHSFTPTAQLSMNLAMAVPLWAGTVVLGFRFKTKNSLAHFLPQGTPTPLIPMLVVIETISLFIQPVALAVRLTANITAGHLLMHLIGSAALALLT-INLPTTFLILVLLVLLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFIVIMTML-PTLYIIMQLKLLSTNYYP-HPSQN-FSKMQTH-NNP-W-QLKWTKIYSP-LS---------MLINRWLFSTNHKDIGTLYLLFGAWAGMMGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNLSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQVCAKAHFMIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSMGSFMSLVAMLLMVYMIWEAFASKRKVLLIEQPTSNLEWLHGSPPPYHTFDEPAFIKI-K--------MAHPVQLGLQDATSPIMEELIAFHDHAFMIISLISFLVLYVLSSVLTTKLTSTNITDAQEMETIWTILPAIILVLIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGALSALLMTSGLIMWFHFYSTTLLMLGLSTNLLTMYQWWRDVIRESTYQGHHTTSVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPHLGGHWPPTGIIPLNPLEVPLLNTSVLLASGVTITWAHHSLMEGNRKQMIQALSITILLGIYFTLLQASEYYEAPFTISDGIYGSTFFIATGFHGLHVIIGSTFLIVCLIRQLMFHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTPTRKSNPILKMINHALIDLPTPPNISTWWNFGSLLATCLLLQIITGLFLAMHYAPDISSAFSSVAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGILLLLMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSIDNPTLTRFFTIHFILPFIITAFTALHLLFLHETGSNNPCGIPSDSDKIPFHPYYTIKDILGVVLLLLVLMTLVLFSPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLMSILILAVMPMLHKSKQQSMMFRPLSQLSLWLLITTLLTLTWIGGQPVNQPFITIGQVASVVYFTTILILMPLASLTENNLL---K---------MF--------AVNLLLIILPIMAAMAFLTLTERKLLGYMQLRKGPNVVGPYGLLQPFADAMKLFIKEPSKPSTSTTSLYIIAPALAFFIALLLWTPLPMPNSLINLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIIMLAVLLMSGSFNLHMLITTQEHLWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIIMMNALTTTIFLGTLYPIHSPELFTTCFITKTLLLTSLFLWIRATYPRFRYDQLMQLLWKNFLPLTLALLMWHISMPIMISGI-P-PQN--MNP-LAQLIIYSTMIMGTIITMMSSHWFLAWAGLEMNMLAFIPILIKKANPR-STEAATKYFLIQSTASMVFMLAIIYNSMMSGQW--TMMNKLDQLPSLIMTMALAMKLGMTPFHFWVPEVTQGTPLISGLLLLTWQKLAPISIMYQIYTSTNTNALLIL-STLSIMAGSWGGLNQTQLRKIMAYSSITHMGWMMMTLTYNPNITIFYLLVYITLTTTAFLALNLNSNTTTLML---ARAWNKLIWLMPLMSITLLSMGGLPPLTGFMPKWVTIQELTMNNSFIIPTIMIIMTLLNLYFYMRLIYITSMTLLPTTNNMKMKW-QFENTKPTLLI-------PPLIILTTFLLPMSPTTLAMF---MN-LALTLMINTLLTMALMIIMFWLPQLNSYTEKANPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPVMIKSSIMLITILTLSLAYEWTQKG--LEWTE-MPIIYMNITLAFIISLLGMLVYRSHLMSSLLCLEGMMLSLFMMSTLMALNMHFPLANIMPIALLVFAACEAAVGLALLVSISNMYGLDHIHNLNLLQCMLKMIFPTIMLLPMTWFSKNNMVWINLTMHSLIISLIPL-LFFNQTSNNLINYS-TLLSSDPLTTPLLMLTAWLLPLMVMASQYHLHNEGPSRKKLYLSMMVLLQISLIMTFMATELILFYILFETTLIPTLIIITRWGNQAERLNAGTYFLFYTLTGSLPLLIMLVYIYNSLGSLNIILLTITAQKLT-TTW-----SHNLTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTLILDP-LTEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVASLIQTPWSFTGAITLMIAHGLTSSMLFCLANSNYERTHSRIMMLTRGLQTLLPLMAFWWLTANLTNLALPPTINLVGELLVVATSFSWSHITIVFMGLNMLITALYSLHMFVMTQRGMFTHHIINMKPSFTRENMLMFMHLSPIILLSLNPNLIMGFTP--------MHTSI-VMLTLTSLTFPVIMT---FINPNKK-HHYPNYVKTT-MMLAFILNLLPMILYIFTDQDMIISNWHWTTIQSLELVLSFKLDYFSMLFMPIALFITWCIMEFSLWYMSSDPNINQFFKYLLIFLTTMLILITANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAAIQAVLYNRIGDIGFVLAMAWFLLHYNSWDLQQMLMLDPN-PSVLPLMGLLLAAMGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNMLIQNLTLSLGAITTLFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLTVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALSTTLIATS-LTSAYSTRTIILTLTGQPRFPTPIMINENNPALLNPLKRLTLGSIVAGFLITSNISPTMIPQTTMPHYLKHLALCVTALGCLMALDLTLMTNNLK--MNTPSHMFKFSNMLGYFPTTMHRMIPYQNLIMSQNVALLLLDLIWLEKSMPKMIMQTHITTSI--VTTTQKGMIKLYFLS---FLIPL--LLILLLMT----------------- +>Papio_papio_Guinea_baboon +----MNENLFASFSAPT-ILGQPATIPIIMFPTLLIPTSK-HLISNQLTTIQQNLIKLTLKQMMAPHNAKGQSWSLMLTSLITFITMTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTIITGLRFKTKNSLAHMLPQGTPTPLIPMLVMIETISLLIQPMALAVRLTANITAGHLLMHLIGNTMLTLST-INFSTTLLTSMLLTLLTILEIAVALIQAYVFTLLVSLYLHNNTMPQLDTSTWFTIIMTML-PTLYLITQLKLLSTNYYQ-PPLTN-NPNLQAH-NTC-W-RPKWTKTYLP-HS-QPQQS---MLINRWLFSTNHKDIGTLYLLFGAWAGVTGMALSLLIRAELGQPGSLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASIAVEAGAGTGWTVYPPLSGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTMGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTCAKAHFIITFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTLSSMGSFISLTATILMIYMIWEAFASKRKVLLTEHPSTSLEWLNGCPPPHHTFEEPAYIKL-NEKGGSRTPMAHPVQLGLQDATSPVMEELITFHDQALMAMFLISFLILYALSSTLTTKLTNTNITDAQEMETIWTILPAVILILIALPSLRILYMTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQLHAYHMVKPSPWPLTGALSAFLLTSGLIMWFHFYSTALLTLGLLTNALTMYQWWRDIIRESTYQGHHTTPVQKSLRYGMTLFIISEVFFFAGFFWAFYHSSLAPTPRLGCHWPPTGITPLNPLEVPLLNTSVLLASGITITWTHHSLMNGNRKQTIQALLITILLGTYFTLLQISEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLLICLIRQLFYHFTPSHHFGFEAAAWYWHFVDVIWLFLYISIYWWGS--MTSMRKSNPIMKMINHSFIDLPTPSNISIWWNFGSLLATCLILQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWTIRYLHANGASMLFICLFLHVGRGLYYGSYLLLKTWNIGIMLLLMTMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTDLVQWVWGGPAIDNPTLMRFFTLHFTLPFGIVALTAVHLLFLHETGSSNPCGIPSDSDKITFHPYYTTKDILGVALLLLALLTLTLLSPNLLNDPDNYTPADPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALFLSILILAAIPMLHKSKQQSMMFRPLSQFLFWLLVTILLTLTWIGSQPVIQPLTTIGQVTSMMYFLTILILMPLAAQVENNLL---KWT-------MT--------TMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNTVGPYGLLQPFADAMKLFTKEPLKPSTSSTILYITAPALAFFIALLLWTPLPMPNPLINFNLGLLFILATSSLTVYSILWSGWASNSNYALIGALRAVAQMISYEVTLSIILLSVLLTSGSFNLNMLITTQEHLWLILPSWPLAMMWFTSTLAETNRAPFDLMEGESELVSGFNIEYSAGPFALFFMAEYMNIIMMNALTTTIFLGTFYPTHSPELFTTSFTIKTLLLTSLFLWVRAAYPRFRYDQLMHLLWKSFLPLTLALLMWSTSMPIAISSI-P-PQT--MNP-LAQLIIYTTVITGTLITMLSSHWFLAWAGLEMNMLAFIPTLIKKTNAR-STEAATKYFLAQSTASMILMMAIISNNLLSGHW-TTTTNHTNQLPPLAMTIALTMKLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQIHPSINTHILLTL-STLSIAVGSWGGLNQTQLRKILGYSSITHTGWMMMTLTYNPTITTLYLITYITLTTTMFLTLNLNSSTTTLML---SNTWNKSTHLMPLMTSTLLSLGGLPPLTGFLPKWTTIQELTMNNNFIIPTIMIAMTLLNLYFYMRLIYTISLTLLPTSNNTKMTW-QFENTKPTLPI-------PALITISTLLLPISPLILSIP---MN-LMLTLTVNTLLTSLLTIIMFWLPQLNSYAEKANPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWALQTTNLSTMIKTSIMFIIILTLSLAYEWTQKG--LDWTE-MTPTHMNITLAFTISLLGMLIYRSHLMASLLCLEGMMMSLFIMTAIMASNTHSPLINIMPIIMLVFAACEAAVGLALLISISNTYGLDHINNLNLLQCMLKMVIPTTMLLPTTWLSKGNTIWINLTTHSLTISLIPL-LFFNQTDNNLLSYS-THLSSDPLTTPLLTLTAWLLPLMIMASQYHLHNKPSSQKKLYLSMMIFLQITLILTFMATELIMFYILFETTLIPTLIIITKWGNQAERLNAGSYFLFYTLTGSLPLLIMLIYTYNKTGSLNTTLLTLTDQKLT-TTW-----SHNLTWLACMMAFMTKLPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEYMAYPFLMLSLWGMVMTS--STCLRQTDLKSLIAYSSVSHMALVIVASLIQTPWSFSGATILMVAHGLTSSMYFCLANSNYERTHSRIMLLSRGLQILLPLMTFWWFMASLTNLALPPTINLIGELFVIAASFSWSKITMILTGLNMLITALYSLHMFTTMQRGTLTHHTINMKPPFTRENTLMFLHLAPTILLTLNPNTILGLTP------MTMYTSI-MLMTLASLALPIFAA---LVNPNKT-RSYPNYVKTT-MMHAFITSLIPTTLYIFSNQETTIWSWHWMMTSTLDLTLSFKLDYFSMMFIPIALFITWSIMEFSLWYMSSDPNINQFFKYLLIFLITMLILITANNLFQLFIGWEGVGIMSFLLISWWHARTDANTAAIQAVLYNRIGDIGLILAMVWFLLHYNSWDFQQMLALNPH-PSLLPLMGLLLAAVGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNTLIQNLTLCLGAITTLFMAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLIIGNLALTGMPFLTGFYSKDLIIEATSTSYTNAWALSITLIATS-LTSAYSTRTILLTLTGQPRFPTLTNINENNPALLNPIKRLTAASMITGFLITNNIPPTTLPQPTTPLHLKLLALYMTALGFITTLDLTLMTNKLK--VKTPPQTFKFSNMQGYFSTITHRMIPHQNLLMSQNLALLLLDSMWLEKSMPKMISQTHTTAST--TVTAQKGMVKLYFLS---FLIPL--TLTLLLMA----------------- +>Alouatta_caraya_black_howler_monkey +----MNQNLFASFNVPM-MLGIPLVTLIILFPTMLISSPN-KLINNRLSSLQQWLIQLTLKQMMTVHSTKGRTWSLMLMALIIFIALNNLLGMTPYAFTPTTQLSMNLAMAISLWAATVLTGLRFKTKASLAHFLPQGTPMPLIPMLVVIETISLFIQPIALAVRLTANITAGHLLMHLLGDTTLTLLS-SYTSSSMITIVIIILLIMLELGVALIQAYVFTLLVSLYLHDNSMPQLDMSPWPMVIMSMI-LTLFYITQLKILNFTFHV-TPSSK-LTMPHKH-KTT-W-ELKWTKIYLP-PS-MYQ-----MFMNRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRTELGQPGSLLEDDHIYNVIVTSHAFIMIFFMVMPIMIGGFGNWLVPLMIGSPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGASVDLTIFSLHLAGISSILGAINFITTIINTKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNVKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSVGSFISLTAVILMIFMIWEAFSSKRKVLTVEQLTTNLEWLHGCPPPYHTFEEPTYVKS----------MAHPAQLGLQNATSPIMEELIAFHDHALMIIFLISSLVLYVISLMLTTKLTHTSTMNAQEIEMIWTILPAIILIMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYEDLAFDSYITPTYFLEPGEFRLLEVDNRTTLPMEADIRMLISSQDVLHSWAVPSLGVKADAIPGRLNQAMLASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWASYLYIV--------MTHQTHAYHMVNPSPWPLTGALSAFLLTSGLAMWFHFYYIPLLATGLLASALTMFQWWRDVVREGTYQGHHTMPVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPQTGGHWPPTGIFPLNPMEVPLLNTAILLASGVTITWAHHSLMEANRKESIQALALTIMLGIYFTCLQLSEYSEASFTISDGIYGSTFFVATGFHGLHVIIGTTFLTTCYVRQQLFHFTTNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTTPRKTHPLTKIINNSFIDLPTPSNISAWWNFGSLLGICLIIQITTGLFLAMHYTPDTSTAFSSVAHITRDVNYGWMIRYLHANGASMFFICLFLHIGRGLYYGSFLFLKTWNVGIILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFTFHFILPFIIAALATIHLLFLHETGSSNPSGMASDLDKITFHPYYTTKDILGLIILLLCLMSLTLFSPDLLTDPDNYTLANPLNTPPHIKPEWYFLFTYAILRSIPNKLGGVLALMLSILILMIIPTLHLSKQQSMGFRPITQILFWTLVADLFTLTWIGSQPVEYPFMTIGQTASIMYFLIIITLIPLSALIENKLL---KW--------MF--------MINLLLLIIPALIAMAFLTLMERKILGYMQFRKGPNMVGPYGVLQPFADAMKLFTKEPLLPTTSTTTLYVIAPTLALSIALLMWSPLPMPYPLINFNLGLLFMLATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLHSLISTQEHSWLLLPSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTVFLATPYSMNLPELYTMNFMTKALLLTILFLWIRTSYPRFRYDQLMHLLWKNFLPLTLALCMWYVSMPSLMSGI-P-PQT--MNP-LAHLIISLTVLAGTVITMLSSHWFLIWVGLELNMLAIVPLLAKNTNPR-STEAATKYFLTQATASMLLLMTIYLNNLFSGQW--TIYPSLNQTLATMMFIALTMKLGMAPLHFWLPEVTQGIPLIPAMLILTWQKLAPLSIMLQIFPSIDTNTLLTI-SILSIMIGSWGGLNQTQLRKILAYSSITHMGWMMAVLHYDPNITILTLLIYILLTISTFMTFYLNSNMTTLSL---SHTWNKLTWVMPMIPLMMMSLGGLPPLTGFSPKWAIMQELTKSNNLIIPLTMAMLTLMNLYFYMRLTYSISMTMFPTSNNTKINW-QLKHMKLSPLL-------PPLMISSTLLLPSTPLMLMT----MN-LTLTLATNTLLALLLVTITFWLPQLNTYTEKFNPYECGFDPTTSAHLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNLMLTINTILTLIIILALGLAYEWTQKG--LDWVE-MPFIYINTSLAYFMSLLGLLIYRSHLMSSLLCLEGMMLSLFIMATLTTLNMHFMLMCMMPITLLVFAACEAAVGLALLVLISNLYGLDYVQNLNLLQCMLKIIMPTIMLLPMMWLSKNHMIWINTMMCSLLISALTP-LLLYLPN-NLCNLS-LNFFSDPLTSPLLTLTAWLLPLMILATQQHLHNNPLPRKKLYISMLILLQISLIMTFTASELILFYILFETTLIPTLIIITRWGYQPERLNAGSYFLFYTLAGSLPLLITLLYYLSNLGSLNIL-MMINTKEML-LSW-----TNNIMWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITPILNP-LTEKMGYPFLILSLWGMIMTS--SICLRQADLKSLIAYSSVSHMALVILAILIQTPWSFTGAMILMIAHGLTSSLLFCLANSNYERIHSRTMMFTRGLQALFPLLALWWLLANLANLALPPTINLMGELFTILASFSWSNFTIMFTGFNMLITALYSLHMFTSTQRGPLTYSTSNIKPLFTRENTLMLMHTAPMLLLTLNPKAIMGLTL--------MHSSM-MLLMLAPLLMPIMIT---LIKPHKN-ILYPHYVKLA-IIYALTISILTMTMFIFTGQESIISNWHWMTIHTIKLSLSFKLDFFSIVFAPVALFVTWSIVEFSTWYMNSDPSINQFLKYLLIFLITMLILITANNLFQLFIGWEGMGIMSFLLISWWYGRSDANTAALQAILYNRIGDIGLILAMTWFFMFSNSWDFQQMFILNPN-PDPFPLVSLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLIIRFHPLIESNSSIQTLTLSLGAITTLFTAICALTQNDMKKIVAFSTSSQLG--LMMVTVGINQPHLAFLHICTHAFFKAMLFLSAGSIIHSLNNEQDIRKMGGLFKMLPFTASSLIIGSLALMGMPFLTGFYSKDLIIETANMSYTNAWALTITLLATS-LTAMYSIRIIFYTLTGHPRFTPLILINENNPSLMNPINRLAMGSIFAGFLISNCIPPTSHPQVTMPNHLKLAALGVTILGLLMAMELNLMTNNMK--LSTPVKSFYFSNMLGFYSITTHRSNPHSSLTASQNFTSTLLDLFWLEKSMPKMTTQTQISIST--TTSTQKGLIKLYFLS---FFIPP--ALTLLLII----------------- +>Eospalax_rothschildi_Rothschilds_zokor +----MNENLFASFSTPT-LMGIPIVIAIIMLPTILFSHSN-RIFNNRLVMFQQWIIQLITKQMMSIHSQKGRSWTLLLISLIIFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPLWAGAVILGFRNKTKSALAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALLS-INIPTALITFLILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFNMILFSL-ITLFIIFQLKFSKFNFYM-TPTSK-TINMTKK-PNP-W-ELKWTKIYSP-LS-LPLH----MFVTRWLFSTNHKDIGTLYLMFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVVVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFIHWFPLFTGYTLNDTWAKIHFATMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSMGSFISLTAVLIMVFMIWEALASKREVESVELTTTNLEWLHGCPPPYHTFEEPVYVKV-N--------MAYPFQYGLQDATSPIMEELMHFHDHTLMIVFLISSLVLYIISLMLTTNLTHTSTMDAQEVETIWTILPAVILVLIALPSLRILYLMDEINNPVLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSELKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFEDWSMSMI----------MTHQTHAFHMVNPSPWPLTGAFSAFLLTSGLVMWFHFNSTTLLFLGLTANLLTMIQWWRDVIREGTFQGHHTPVVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGKRLHMNQALLITILLGLYFTILQASEYFETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLLVCLLRQFNYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MLNMRKSHPLLKIINHSLIDLPAPSNISVWWNFGSLLGICLGLQIITGLFLAMHYTSDTLTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGMYYGSYNYLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGFIIMFLFLMILVLFSPDMLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILILLPLLHTSAQRSLMFRPISQCLFWILVADLFTLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPLAGILENKIM---KVSK------MS--------LFNVLLTLLPVLIAMAFLTLVERKILGYMQLRKGPNIVGPYGVLQPFADAMKLFIKEPLRPLSSSVSLFIIAPTLALTLALSLWIPLPMPFPLANLNLGALFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMSGSFSLSSLIMSQESSWFLLSTWPLAFMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIILMNALSTVIFLSSLILPKLPELFTLNFMTKTLLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISLPIILASI-P-PYM--MNV-LALIIILLTVFLGSMITILSSHLILMWAGLEMSMLAIIPALMYNSNPR-STEAATKYFLTQATASMIFLLAIILNYNNLGSW--EFHYNTEYYIFTLVLLALMMKLGLAPFHFWVPEVTQGIPILSGLLLLTWQKIAPLAILFQISYSINSTIVPLS-AIMSVFIGGWGGLNQTQLRKILAYSSIAHMGWMVAVTMYNPSMMLLNLIIYMFLTTSMFITIYINNSTSIASL---TKMWNKSPLMISTTLIILLSLGGLPPLTGFLPKWMIIIELTKNNCIFMALSMTMMALLNLYFYTRLIYASSMTMFPSTNNMKTNI-HQTNNKNNLFL-------PPLIIISSLALPLSPIINVLY---MN-LVMALTTNIILALILVTVAFWLPQLNIYSEKAGPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNNLMTTLIMALILIIILILGLLYEWLNKG--LEWTE-MSPVFLNLLLAFSLALLGTLLFRSHMMSTLLCLEGMMLSLFLMTSLISLNSQFPLAFIIPIIILVFAACEAAVGLALLVMVSNSYGTDYVQNLNLLQCMLKIVIPSIMILPLTWLSKNNMIWINTTSYSLIISLITL-FTLNQHNDISSNFS-TVCFSDPLSSPLIILTTWLLPLMLLASQNHLKKEPMVYKKIYISLLTSLQILLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALIHSHNLMGTMNFILLNIQQPTSP-SSW-----SNHIMWLAFMMAFMVKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRISILLDP-INKTMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVMIQTPWSYMGATALMVAHGLTSSLLFCLANTNYERIHSRTMILARGMQTILPLMGTWWMLGSLANLALPPSINLIGELVIITSSFSWANSTILLMGMNILITALYSLYMLISAQRGKTTHHTKNISPSHTRESTIMALHVLPTILLSLNPKFILGFPY------MNMLHSL-NFFILLTLMLPLLLS---FTKMIKS-TNLPTHVTNS-IKLSFLMSLMPLMSFLLLNNEFMVSNWHWVTLNSIKLSMSFKFDFFSIIFIPIALFVTWSIMEFSLWYMHSDPNLDRFMKYLLMFLMTMIILVSANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFILAMTWFCTNLNSWELQQIFAISTNTMNTLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFFPLTNNNQTILTLMLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLAKPMPFTSSCLTIGSLALTGTPFLTGFYSKDLIIETMNTSYTNAWALIITLIATS-LTAVYSTRIIFFVVMSKPRFPPIISINENNPQLKKAINRLALGSIFAGFLISKFIPPMNNPIMTMPLYLKLTALLVTILGFTIAMELNNLTFFLT--SKYSSSMHHFSSLLGFFPSIFHRLLPNKNLKFSQNIASNLMDLIWLEKAIPKTIAYSNILASM--KITNQKSLIKLYFLS---FLITI--TLILLFQVP--------SFHEWFQW +>Mammuthus_columbi_Columbian_mammoth +----MNEELSAFFDVPV-----GTMMLAIAFPAILLPTPN-RLITNRWITIQQWLVKLIMKQLLSIHNTKGLSWSLMLITLTLFIGLTNLLGLLPYSFAPTAQLTVNLSMAIPLWTGTVILGFRYKTKISLAHLLPQGTPTFLIPMIIIIETISLLIRPVTLAVRLTANITAGHLLIHLTGTAALTLLS-IHSMTITVTFITVVVLTILELAVALIQAYVFALLISLYLHESAMERMDIIIWLLAVVIVL-TTLMIFLHLKTLKIIRLL-FPVSK-ELSKKSC-VFP-W-KKKWTKNYPP-SSMYP------MFANRWLYSTNHKDIGTLYLLFGAWAGMVGTAFSILIRAELGQPGSLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGTGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILSAINFITTIINMKPPAMSQYHMPLFVWSILVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMVSHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLNHTWAKIQFLVMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTAWNTASSMGSFISLVAVILMVFMIWEAFASKREVSVMELTTTNVEWLNGCPPPHHTFEEPAYVKS-NS-------MAYPLQLGFQDATSPVMEELLHFHDHTLMIIFLISSLVLYIIMLMLTTKLVHTNMMNVQEMEMIWTILPAIILILIALPSLHTLYMMDEINNPLLTIKTMGHQWFWSYEYTDYEDLAFDSYMITTDSLKFGELRLLEVDNRMVLPTDLPVRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQVTLTSMRPGLFYGQCSEICGANHSFMPIVLELVPLKYFESWSASLA----------MTHQTHAYHMVDPSPWPLTGALSALLMTSGLTMWFHYHSVILLFLGLMTNTLTMFQWWRDVVREGTFQGHHTPVVQEGLRYGMILFITSEVLFFTGFFWAFYHSSLAPTPELGSYWPPVGVYPLNPLEVPLLNTSVLLASGVTITWAHHSLMEGNRKNMLQALLITILLGVYFTLLQMFEYYEASFTISDGIYGSTFFVTTGFHGLHVIIGSTFLLTCFIRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYLSIYWWGS--MTHIRKSHPLLKILNKSFIDLPTPSNISTWWNFGSLLGACLITQILTGLFLAMHYTPDTMTAFSSMSHICRDVNYGWIIRQLHSNGASIFFLCLYTHIGRNIYYGSYLYSETWNTGIMLLLITMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGTDLVEWIWGGFSVDKATLNRFFALHFILPFTMIALAGVHLTFLHETGSNNPLGLTSDSDKIPFHPYYTIKDFLGLLILILFLLLLALLSPDMLGDPDNYMPADPLNTPLHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILGIMPLLHTSKHRSMMLRPLSQVLFWTLATDLLMLTWIGSQPVEYPYIIIGQMASILYFSIILAFLPIAGMIENYLI---K---------MF--------LINVLTVTLPILLAVAFLTLVERKALGYMQLRKGPNVVGPYGLLQPIADAIKLFTKEPVYPQTSSKFLFTVAPILALTLALTVWAPLPMPYPLINLNLSLLFILAMSSLMVYSILWSGWASNSKYALMGALRAVAQTISYEVSMTTIILSMVLMNGSFTLTAFATTQEHLWLIFPMWPLMMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFMAEYANIIMMNALTVILFMGTSCNPQMPEISTINFVVKTIILTICFLWVRASYPRFRYDQLMYLLWKNFLPLTLALCMWHISILISLACI-P-PQA--MNP-LALSLILTTLLAGTLITMMSSHWLTAWMGLEMNMLTMIPILMKTTNPR-STEAATKYFMTQATASMMLMMALTINLMYSGQW--SIMKMTNPVASNVALMALMTKLGSAPFHFWVPEVTQGVELTSGMILLTWQKLAPLSLLYQMATYTNTNLIYLS-GLLSILIGGWGGLNQTQLRKILAYSSISHMGWMLIILPFNPTLTLLNLAIYILLTLSIFMILANTLTTSMSSL---TLMWNKTPAMTIMLMTTLLSLGGLPPLSGFTPKWLMIHELTKNNSIIMPLTMAIMTLLNMYFYMRLIYYSSLTILPSTNNMKMTW-QFTNTKHTMML-------PTLITLSNMLLPLTPMISMLE--MIN-LMATLLTNTMLTSLMVLIAFWLPQTYTYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQANNTNLTLLMSFMLIILLAIGLAYEWLQKG--LEWTK-MPYIYMNITLAFVISLIGTLMYRSHLMSSLLCLEGMMLSLFTLNALLSLNMNFTLSTTVPLILLVFAACEAAVGLALLIMISNTYGLDYVQNLNLLQCMLKTILPTIMLIPLAWLTSNNMVWINTTLYSFAISLTSL-HLLHQPLDNSLNLS-PEFFLDSLSTPLLILTIWLLPLMLIASQSHLSSGSTFQKKSYITTIILLQVSLIMTFAATDLILLYIMFETTLIPTMIIITRWGNQLERLNAGSYFLFYTLMGSLPLLVTLMLIQNTLGSLNLMMLPYLAKSID-NLW-----STNMLWLTCIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITILLDP-LTTHMYYPFLMLSLWGMVMTS--SICLRQTDMKSLIAYSSVSHMALVIIAIMLQTPWSFMGALALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLINMAPPPTINLIGELLIITTSFSWSNLTIFPMGLNVLITTMYTLHMMTTTQRGKTSHHAKSIKPSFTRENTLMALHLLPLLLLSLNPNIIL----------MNPISTL-TLASLIILTLPITMT---LLQNNKT-NCFLYITKTA-VTYAFVISLIPTLLFVQSNQEAYISNWHWMTIHTLKLSLSFKLDFFSLTFMPIALFITWSIMEFSLWYMHSDPHINRFFKYLLLFLITMLILVSANNLLQLFMGWEGVGIMSFLLISWWHGRTDANTAALQAMLYNRIGDMGFIMMMAWFIIHLNSWEFQQIFLTNPK-NTTLPLLGLLLASAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVMAGVFTLIRFYPLMENNLTIQTSTLCLGAITTLFTAICALTQNDIKKIIALSTSSQLG--LMMVTIGINQPHLAFTHMCTHAFFKAMLFLSSGSIIHNLDNEQDIRKMGGLYKTMPITSTAIIIGSLALTGMPFLTGFYSKDPIIETANMSYINTWALLVTLIAVS-MTASYSTRIIFFALLGQPRYPTLTRINENNPHLVNPIKRLILGSIFMGFFISMNTIPHTTPQMTMPPHLKFMALAVTLLGFTVATELNNMTHNLM--FKQPSRMHTFSTTLGYYPTTTHRILPYLSLTMSQNLATTIMDSIWLEKMIPKNLTTMQKTAAS--LVSNQKGLMKLYFLS---FLLSI--TLGLLIAL----------------- +>Mustela_erminea_ermine +----MNENLFSSFTTPT-MMGLPIVIIITMFPGILFPSPN-RLVNNRLISIQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTITATITFTILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-ITLFLMFQLKVSKYNFPE-NPEPK-LVATSKS-TTP-W-ENKWTKIYFP-HS-LPLQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMLGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGSINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDTWAKIHFTIMFVGVNTTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFSSKREVLTVELTSTNIEWLHGCPPPYHTFEEPTYVLS-K--------MAYPFQMGLQDAASPIMEELLHFHDHTLMIVFLISSLVLYIISVMLTTKLTHTSTMDAQAVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEITIRMLISSEDVLHSWAIPSLGLKTDAIPGRLNQTTIMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLTTSGLVMWFHYNSLSLLTLGTAANMLTMYQWWRDVVREGTFQGHHTPTVQKGLRYGMILFITSELFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITISLGLYFTILQASEYYEAPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLTKIINNSFIDLPAPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYMFPEAWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALFLILTLMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILVLAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFMILLVLMPIISIIENNML---KW--------MF--------MINIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFVMAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHTPYLPELYSINFTMKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASV-P-PQT--MKP-PILTIIMFTIISGTIMVLMSSHWLTIWIGFEMNMLAIIPILMKKFSPR-AVEAATKYFLTQATASMLLMLGIIMNLLLTGQW--TVLNTLNPIVSNMMTMALAMKLGLSPFHFWVPEVTQGIPLSSGMILLTWQKIAPLSILYQMAPSMNPYLLMTM-AFMSILTGGWGGLNQTQLRKIMAYSSIAHMGWMIAATTYNPTLMLLNLTIYITMTLGTFMLFMFNSSTTTLSL---SLTWNKLPLITSLILIIMLSLGGLPPLSGFMPKWMIIHELTKNNMIIAAMLMTMTALLNLYFYMRLTYATALTMFPSTNNMKMKW-QFENTKSTALL-------PPLIMISTMLLPLTPMMSTLF---MN-MMLTMFINVSLASLLILIAFWLPQLNIYTEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNNLKTTLTMALALISLLAVSLAYEWTEEG--LEWNE-MSVVYINIFLAFTLSFMGLLIYRSHLMSSLLCLEGMMLSLFVMMTVTILANHFTLASMTPIILLVFAACEAALGLSLLVMISSTYGTDYVQNLNLLQCMLKIIIPTMMLVPLTWLSKPNMIWINTTAHGMLISLISL-TYLNQFTDNNLNLS-LLFFADSLSTPLLVLTTWLLPLMLMASQHHLSKETLVRKKLYITMLVMLQLFLIMTFTATELIMFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLWVQNNLGTLNLLIIQYWAQPLP-NSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-LTSHMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAVLIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLMGELFVVMASFSWSNITIVLMGVNITITALYSLYMLITTQRGKYTHHIKSIKPSFTRENSLMALHLLPLLLLSLNPKIILGSIY---MKVINLFTSS-LLVTLLMLTLPIMTT---NTSMYTN-KTYPQYVKTT-ISYAFMISLIPTMMFLHFGQDTVISNWHWITIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGLILTMAWFLTNLNTWDLQQIFMTNHE-NLTIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTIQTITLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKVLPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLLTLVATS-MTAAYSTRIMFFALLGQPRFNPIITINENNPLLINSIKRLLFGSIFAGFLISHNLAPTTTPQMTMPHYLKMMALAVTILGFILALELNLMMQGLK--FKYPSSLFKFSNMLGYFPTIIHRLIPKTNLLMSQKSASTLLDMIWLEKILPKSISHFQMKSSI--TISSQKGLIKLYFMS---FMLTL--TLSLLAL----------NFHG---- +>Nannospalax_golani_Golan_Heights_blind_mole_rat +----MNENLFASFATPT-LMGLPIVIPIIMFPTLFFKTTN-KLINNRVTTAQQWLIKLITKQMMFTHSPKGRTWSLMLTSLIIFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPMWAGAVILGFRYKTKASLAHFLPQGTPITLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLTT-INLSTASITFLILMMLTILELAVAMIQAYVFTLLVSLYLQDNTMPQLDTSTWSTVIMTSL-VTLFIILQLKLSSFNLTP-TASPK-QTKFNKT-HNP-W-DKKWTKIYLP-LS-LPLH----MFITRWLFSTNHKDIGTLYLMFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAVTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFIHWFPLFTGFSLSETWAKIHFAVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNVISSMGSFISLTAVMIMVFMVWEAFASKREVEAVDLTSTNLEWLHGCPPPYHTFEEPTYVKV-N--------MAYPLQYGLQDATSPIMEELMNFHDHTLMIVFLISSMVLYVITAMLTTRLTHTNTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSELKPGELRLLEVDNRVVLPVELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATITSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSSTMI----------MTHQTHAFHMVNPSPWPLTGALSAFLLTSGLIMWFHFKSFTLLTIATAGNILTMYQWWRDVVREGTFQGHHTPPVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGINPLNPIEVPLLNTAVLLASGVSITWAHHSLMEGKRNHMIQALLITILLGLYFTLLQASEYLEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLLTCLLRQLNFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKSHPLIKIINHSLIDLPTPSSISTWWNFGSLLGMCLGLQIVTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWMIRYLHANGASMFFICLFLHVGRGIYYGSYHFKETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMVHLLFLHETGSNNPSGLDSNADKIPFHPYFTIKDILGAMMLTIILTSLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIIPMLHTSAQRSLTFRPISQLLFWMLVADLITLTWIGGQPVEHPFIIIGQVASILYFSIILILMPLAGLVENMIM---KL-------------------MNMLTLLLPILVAMAFLTLVERKTLGYMQLRKGPNVVGPYGVLQPFADAMKLFTKEPLKPLTASLTLFIIAPTLALTLALSLWIPLPMPYPLLNLNLGALFILATSSLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLLSGSFSLLSVISSQELTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFLGAVYNPHNPELFTLNFMLKTLILTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISMPMTMASI-P-PYT--MNI-LALTIILLTIFVGSIITILSNHLILMWAGLEMSMLAIIPILMFNSNPR-STEAATKYFLIQATASMILLLAIILNYHDLGIW--QFHHNTQFYIYSLVLIALMMKLGLAPFHFWVPEVTQGVPILSGLLLLTWQKIAPLAIMFHISYYLNTTMVPLS-ALMSVFIGGWGGLNQTQLRKILAYSSIAHMGWMVAVTMYNPTMMLLNLVIYMFLTTSMFITVYICTSTSISSF---TKMWNKSPLLISTTLIILMSLGGLPPLTGFLPKWMIIIELTKNNCIFMALSMTMMALLNLYFYTRLIYASSMTAFPTSNNMKTNT-HHQNNKKHPLL-------SPLIIISSLALPLSPLVSSLY---MN-LLITMMINTSLSMILISMAFWLPQLNLYSDKASPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPIPWAIQYGNLTGVVLTTLGLLIILALGLMYEWFNKG--LEWTE-MTPVFFNLLLTFILSLLGALMFRSHLMSTLLCLEGMILSLFTMTSLITLNSHSMLSFIIPIIILVFAACEAAVGLALLVMVSNTYGTDYVQNLNLLQCMLKIILPSIMLLPLTWFTNNKTVWTNTTCHSLMISLISL-SLLHQDSTNSYNFS-TTFFSDPLSTPLVILTTWLLPLMLLASQNHLSKEQDNYKKMYISLLTLLQVFLIMTFTATELMLFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLISLINFSNTFGTLNLVLLSLKQPALS-QSW-----SNHILWLAFMLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKMGGYGMMRISILLDM-VNKTMAYPFIMLSLWGMVMTS--SICMRQTDLKSLIAYSSVSHMALVIVAVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERTHSRTMMLAQGLQTILPLMGVWWMLGSLANLALPPSINLIGELLIITSSFSWSNLSILMMGMNMIMTAAYTFYMLISSQRGKLTNHTKFLPPTHTRESTIMSLHIIPIILISINPKLILGLP-------MNINVSM-NLLILTTLTTPLLLS---LTSKYNS-NSYPKHVINS-IKLSFLFSLLPLLMFINNNNELITSNWHWMTINSMKLVMSFKFDYFSYLFIPVALFVTWSITEFSSWYMHSDPNLNRFMKYLLMFLMTMIILVSANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLILSMAWFTIHTNSWELQQIFILSTN-TDILPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLMIRFYPLTQNNQTILTLTLCLGAMTTLFTAMCALTQNDIKKIVAFSTSSQLG--LMFVTLGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKSMPFTSSCLTIGSLALTGMPFLTGFYSKDLIIETLNTSNTNAWALLVTLIATS-MTAVYSTRIIFFVVMSKPHFTPTITMNENNPQLINPINRLAMGSILAGFMITSNLPPTNIPTMTMPLSLKLTALTISILGFTIAMDLNNMTSTLT--HKSPTPTHKFTTLLGYFPSIIHRLLPIKSLTMSQNMASNLMDLIWLEKAIPKTIANTQMAASI--ITSNQKGLIKLYSMS---FLMNI--TIISLLTLT--------YYLE---- +>Blastocerus_dichotomus_marsh_deer +----MNENLFASFITPM-MMGLPLATFIVIFPSLLFPTSN-RLVNNRLISLQQWVLQLVSKQMMGNHSTKGQTWTLMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLTLMT-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFMMIMSMF-LALFIIFQLKVSKHNFFF-NPEPM-PTKTQKQ-STP-W-EMKWTKTYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYINL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMNAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLDYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLMIGLTTNFLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITISLGIYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLVLQILTGLFLAMHYSSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYNYLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAMIHLLFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGALILILFLMLLVLFMPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHMSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEHPFTIIGQLASILYFFIILVLMPITSMIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKILGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLMMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGASHSPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-IISILILSTMILGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLDMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKMPVMTVLILVTLLSMGGLPPLSGFMPKWMIIQEMTKNNSLILPTFMAITALLNLYFYMRLTYSTALTMFPSVNNMKMKW-QFSTTKKMTLL-------PTMIVLSTMLLPLTPILSVLE---MN-LMLALLTNFMLASLLVIIAFWLPQLNVYLEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWACQTNNLNTMLTMALFLILLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMASLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTYSLLISLTSL-LLMNQFNDNSLNFS-LMFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALIYLQNITGSLNFLILQYWVQSLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFIVMSTFSWSNITIILMGLNMIITALYSLYMLTTTQRGKYTYHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLC------MNLFSTF-TLITLLLLIIPIMAT---SSNNYKT-YNYPLYVKTT-VSYAFITSMIPTMMFIYTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLNPN-NSNLPLMGLALAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSALLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIETINTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLVTINENNPFLTNSIKRLMIGSLFAGFIISNNIPPTTIPQMTMPYYLKMMALTVTILGFILALEISNMTQNLK--FNYSSNAFKFSNMLGYFPTIMHRLTPYMNLMMSQKSASSLLDLIWLENVLPKTTSLMQMKMST--MITNQKGLIKLYFLS---FLVTI--IISTILL----------NFHE---- +>Artibeus_lituratus_great_fruit-eating_bat +----MNENLFASFITPT-MMGLPIVILIIMFPTIMFPSTN-RLVNNRLVAIQQWLVYLTSKQMLSIHNRKGQTWALMLMSLILFIGCTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTATALITFMILVLLTILEFAVALIQAYVFTLLVSLYLHDNAMPQLDTSTWFITILATI-LTLFIIMQLKISTYYYHS-NPEPK-TTKTTKS-LIP-W-ETKWTKIYSP-LS-LPLR----MFISRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGVGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNTTWAKIHFLVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFAAKREVSVAELTTTNLEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFMISSLVLYIISSMLTTHLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPLMTVKTMGHQWYWSYEYTDYTDLCFDSYMIPTSDLKAGDLRLLEVDNRVVLPMETTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVSLKYFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSTTLLTLGLLANTLTMYQWWRDIIREGTFQGHHTPVVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLNPLDVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQSLFITICLGLYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIINSSFVDLPAPSSLSSWWNFGSLLGVCLGVQILTGLFLAMHYTSDTATAFNSVTHICRDVNYGWLLRYLHANGASMFFICLYLHVGRGLYYGSYTYSETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFLLPFIVTALVMVHLLFLHETGSNNPTGIPSDPDMIPFHPYYTIKDILGFLVMLTALATLVLFSPDLLGNPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIVPILHMSKQRSMMFRPLSQCLFWLLVAVLFTLTWIGGQPVEHPYIIIGQTASVLYFLIILFLMPTISLLENYLL---KW--------MY--------LINLLTTIVPVLLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFIIAPILALTLALTMWVPLPMPHPLINMNLSILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSYSLSTLITTQEYMWLIYPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTTTLFLGAYHNPISPELYTTSFAIKTLLLTTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVTMPIMMAGI-P-PQT--MNP-IIFSTIMTTVILGTTIVMTSSHWLMVWIGFEMNMLAIIPLLMKTHHPR-STEAATKYFLTQATASMLLMLAVIINLLYSGQW--TITNMMNPTASTILTLAMTMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYMISPNINSDLLLTM-SILSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILIYNPTMTLLNLTIYIMMTLTMFMLLITTTTTTTLSL---AHTWNKTPLITIIIMAVLLSLGGLPPLAGFMPKWMIIQELTKNESIILPTFMAITALLNLYFYMRLMYATSLTMFPTANNIKIKW-HFNNTKRMMLL-------SPLTIMSTMTLPLTPLLTILY---MN-MAITLLTNTFLASLLVIIAFWLPQTNSYTEKVSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLQNMLPMSLMLISLLALSLAYEWSQEG--LEWSE-MSLTYMNMFMAFTISLLGLLMYRSHMMSSLLCLEGMMLSLFVMMTITILNTHLTLASMLPIILLVFAACEAALGLSLLVMVSTTYGMDYVQNLNLLQCMLKIIIPTIMLVPLTWLSNPKMIWINSTAHSLIISLLWI-PLANQFTDNTLNLS-IMFFSDALSTPLLMLTLWLLPLMIIASQSHLANEHPTRKKSYITMLILLQVFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQAERLNAGLYFLFYTLVGSLPLLIALTYIQNLTGTLNFLLTQYWITLLP-TSW-----NTTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITILLEP-LTDFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQMLLPLMAAWWLLASLTNLALPPTINLIGELFIIMSMFSWSNLSITLLGLNIILTALYSLYMLIMTQRGKHTQHINNISPSYTRENTLMTMHMLPLLLLSISPNIILGTPY------MNLVSST-MLLSLVILVMPIMTT---MLYPQNY-SNFPRYVKTM-VSYSFFISIIPMMAFIYSNQEMMISNWHWITIQTLKLSLSFKLDFFSILFMPVALFVTWSILEFSMWYMHSDPNINRFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRADANTAALQAILYNRIGDIGFILSMEWFLTYLNTWELQQIFSLSTT-STSLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPFSPMKHSSTMVVAGIFLLIRFYPLMENNTMIQTTALCLGAMTTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLGDEQDIRKMGGLYKTMPFTSTAMTVGSLALTGTPFLTGFYSKDLIIEAINTSYTNAWALLMTLIATT-LTAVYSTRIIFFALLGQPRLPSLILINENNPLLLNAIKRLLIGSIFAGFLISKNIPPMTILPMTMPPYLKLTALFVTLIGFILALELNMAALNLK--FKSPSNMFKFSNLLGYFPTIMHRLPPLTSLTMSQKSASLLLDLTWLEIFLPKTISLIQLKTST--LVSNQKGLIKLYFLS---FLITL--LLALSLF----------THHV---- +>Trachypithecus_hatinhensis_Hatinh_langur +----MNENLFTPFTTPT-LLTLPAVVPIILFPTLLFPTSK-HLVNNRLITIQQNLIQLTLKQMMTIHNTKGQTWSLMLMSLIIFIATTNLLGLLPHSFTPTAQLSMNLAMAIPLWAGTVITGLRFKTKNSLAHFLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGSAVLALLT-INFFATSLTFVLLLLLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFITIMTML-PALYLIMQLKLLNMNYYL-NPSQK-IPNMQTF-NSP-W-QLKWTKIYLL-HL-QPQHS---MLINRWLFSTNHKDIGTLYLLFGAWAGTVGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNLSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSAAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQICAKVHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSTGSFMSLVAMLLMIYMIWEAFTSKRKVLSIEQPTYNLEWLHGSPPPYHTFDEPAFIKV-K--------MAHPVQLGLQDATSPIMEELIAFHDHAFMIVSLISFLVLYVLLSVLTTKLTSTNITDAQEMETIWTILPAIILVLIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAIPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGAFSALLMTSGLIMWFHFYSMILLMLGLLTNMLTMYQWWRDIVRESTYQGHHTMPVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPHLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMENKRKQMIQALLITILLGTYFTLLQMSEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTVCLIRQLLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTPLRKSNPVMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSIDSPTLTRFFTLHFTLPFIITTLTTLHLLFLHETGSNNPCGILSNSDKIPFHPYYTIKDILGLIFLFLILMTLVLFSPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPVLHKSKQQSMAFRPLSQFLLWLLVTTLLTLTWIGSQPVNQPFIMIGQVASMLYFTTILILMPLASLIENSLL---K---------MF--------TTNILLVTLPAIVAMAFLTLTERKLLGYMQLRKGPNIVGPCGLLQPFADAMKLFTKEPLKPSTSTTTLYVIAPALAFTIALLLWVPLPMPNSLINLNLGLLFILATSSLAVHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSILLMSGSFNLHSLITTQEHLWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNTEYAAGPFALFFMAEYMNIIMMNALTATVFLGSLYPIYSPELFTTCFITKTLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLAFLMWYISVSIMSSGI-P-PQI--MNP-LAQLIIYFTMFMGTIITLLSSHWFLAWTGLEMNMLAFTSILIKKTNSR-STEAATKYFLVQSTASMILMMAIMYNSLFPEQW--TMMNNINQSSSLAMMMALAMKLGMAPFHFWIPEVTQGTPLIPGLLLLTWQKLAPISIMYQIYTSINTNILLIL-SILSIMAGSWGGLNQTQLRKILAYSSITHMGWMMTTLTYNPNVTIFYLLTYIVLTTTAFLALNLNSNTTILML---SHTWNKLTWLMPLMSSTLLSMGGLPPLTGFLPKWVTIQELTKNNNFIMPTIMIIMTLLNLYFYLRLIYTTSMTLLPTSNNTKMKW-QFENTKPTLLI-------SPLIIITTFLLPMSPTVLTIP---MN-LVLALTINTLLTLLLMIIMFWLPLLNPYAEKADPYECGFDPLNSARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPVMIKSSMMLIIILTLGLAYEWTQKG--LDWTE-MPIIYMNIMLAFLISLLGMLIYRSHLMSSLLCLEGMMLSLFIMSTLMALNMHFPLANIVPIALLVFAACEAAVGLALLVSISNTYGLDYIHNLNLLQCMLKMILPTIMLLPTTWFSKNNMLWINLTTHSLIISLIPL-MFFNQTSNNLTSYS-TYLSSDPLSTPLLTLTAWLLPLMIMASQYHLHNENPLRKKLYLSMMIFLQISLIMTFMSTELILFYILFETTLIPTLIIITRWGNQAERLNASTYFLFYTLAGSLPLLIMLMFTYNNMGSLNIVLLTLTAQKLT-TTW-----SHNLTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKALIAYSSVSHMALVIMASLIQTPWSFTGAIILMIAHGLTSSMLFCLANSNYERTHSRIMLLSRGLQTLLPLMAFWWFAANLTNLALPPTINLIGELLVMATLFSWSHITIMLTGLNMLITALYSLYMFITTQRGTLTSHIMNMKPSFTRENMLMFMHISPIILLSLNPNIIMGFTS--------MHASI-VMLTLTYLTLPIIIT---LIKPNKN-HLYPNYVKTI-MMFTFIFSLFPMTLYILLDQDMVISNWHWTTIQSLELTLSFKLDYFSMMFTPIALFITWCIMEFSLWYMSSDPNINQFFKYLLIFLITMLILITANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAATQAILYNRIGDIGFVLAMAWFLLHYNSWDLQQMFILDSN-PSFLPLMGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENSLLIQSLTLCLGAITTLFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKALLFICSGSIIHNLNNEQDIRKMGGLFKIMPITSTSLTIGNLALTGMPFLTGFYSKDLIIETANTSYTNAWALSTTIIATS-LTSAYSTRTIILALTGQPRFSTSTHINENNPALLNPMKRLTLGSLLAGFLITNNIFPTTPPQLTMPHYLKLLALCVTILGFLMALDLTLMTNNLK--MYTPSHMFKFSNMLGYFPITIHRMIPYQNLIMSQNLAFILLDSIWLEKSLPKTISHIHTTTSI--TMTTQKGMIKLYFLS---FLISL--TLVTLLMA----------------- +>Cervus_elaphus_xanthopygus_Manchurian_Wapiti +----MNENLFASFITPM-ILGLPLATLIVMFPSLLFPTSN-RLVNNRLISLQQWVLQLVSKQMMGIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGAALALMS-ISTTMALITFTILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LALFIIFQLKISKHNFHF-NPEPV-STKTQKQ-NTP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEELSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMTLLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINTRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFMETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGMNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGILLLVLFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIIIGQLASVLYFFIILVLMPITSTIENNLL---KW--------MF--------MINILMLIVPILLAVAFLTLVERKVLGYMQFRKGLNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPWFRYDQLMHLLWKNFLLLTLALCMWHVSLPIFMASI-P-PQT--MNP-IIFILILSTMMMGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEAATKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMFMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTVLVLITLLSMGGLPPLSGFMPKWMIIQELTKNDSLILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPMLSILE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVALAGLLMYRSHLMSSLLCLEGMMLSLFVMASLTILNSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTHGLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYLQNTTGSLNFLVLQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGFMVLATALLNFGCYGMLRITKFENP-LTDFMGYPLILLSLWGMIMTS--SICLCQTDLKSLTAYSSVSHMALFIVAILTRTPWSSMGATALMIAHSLTSSVLFCLGNSNYEQVHCQTMILAQSLQMFLLLMATWWLPASQTNLALTPTINLTGELFVVMSSFSWSDIAVILMGIYMMLPALYSLYMVITTQWGNYTHHMNSISPSFTGENALMSLPILPLLLLSLNPKIILGPLY------MNQISSF-TLATLSLFTIPIMTT---SSDNYKT-SNYPLYVKTT-ISYAFITSMIPTMMFIYTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFALNPN-DSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTIPQLTMPHYLKMMALTVTILGFILALEVSNMTQNLK--FNYSTNIFKFSNMLGYFPTIMHRLTPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQTKMSI--MVTNQKGLIKLYFLS---FLVTI--AVSMILF----------NFHE---- +>Vespertilio_sinensis_Vespertilio_superans +----MNENLFASFITPT-LMGLPVVIIIIMFPSIFFPSTT-RLISNRLIAMQKWLIRLTTKQMMAIHSKKGQTWALMLMSLIMFIGSTNLIGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGSATLALMD-ISMTTALITFIILVLLTVLEFAVALIQAYVFTLLVSLYLHDNAMPQLNTSTWSITILSMI-ITLFIIFQLKISKHCYYT-NPEPL-VTKTQEH-KNP-W-ETKWTKIYLP-LS-LPQH----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFIHWFPLFSGYTLSSTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVVLMVFMVWEAFASKREVLTVELPSTNLEWLHGCPPPYHTFEEPTYVNH-K--------MAYPFQLGFQDATSPIMEELLSFHDHALMIVFLISSLVLYIISLMLTTSLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPLVTIKTLGHQWYWSYEYTDYEDLMFDSYMIPTNELNPGQLRLLEVDNRVVLPAELTIRMLITSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGVYYGQCSEICGSNHSFMPIVLEMVPLKHFEKWSLSMM----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSTFLLLIGLTTNMLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFILSEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRSHMMQALLITILLGLYFTVLQASEYYETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCLLRQMSFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINQTFIDLPAPSNISSWWNFGSLLGICLALQIVTGLFLAMHYTSDTDTAFNSVSHMCRDVNYGWVLRYLHANGASMFFICLYLHVGRGIYYGSYMFKETWNMGVILLFAVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGTDLVAWIWGGFAVDKATLTRFFAFHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLFVMILVLSSLVMFSPDMLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILVLFIFPLLHTSKQRSMAFRPFSQCLFWLLIANLLTLTWIGGQPVEQPYIIIGQLASILYFLIIIVIMPLTSLMENHLM---KW--------MY--------FINLLTTIVPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPMQPLTSSLTLFIIAPTLALTLALMMWIPLPMPYPLVNMNLSVLFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSILLMNGSFTLSTLITTQEYIWLMMPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTVVLFLGAYNNPLFPGTYTTNFTIKVLLFTTFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVSLPIILASI-P-PQT--MNP-MVFSLIITTMMSGTLLVMTSSHWFMVWVGFEMNMLAIIPLLTKQHNPR-STEAATKYFLTQATASMLLMMAAIINLLYTGHW--SLLKLISPTASTMMTMALAMKLGLSPFHFWVPEVAQGIPLSSGLILLTWQKLAPLSILYMISPIIDLNLLMIM-ALLSIGIGGWGGLNQTQLRKILAYSSIAHMGWMASILTYNPTMMLLNLYIYIMMTITTFLLLMINSTTTMNSL---SYMWNKLPLITMIILVIMMSMGGLPPLTGFLPKWLIIQELVKNNNIIISTIMALLALLNLYFYTRITYTTSLTMFPTTNNTKITW-QFKDPKHLIYL-------SPMIIISTLTLPTSPVMMILE---MN-LMLTLITNTLLALLLVTIAFWLPHMNAYAEKSSPYECGFDPMGSARIPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLLLMLFMSLFLILLLIISLAYEWMQKG--LEWSE-MSLTYMNIMMAFITSLLGLLMYRSHLMSSLLCLEGLMLSLFVLVSLMILTTNSTLTNMLPIILLVFAACEAALGLSLLVAVSNTYGVDHVQNLNILKCMLKIILPTIMLIPLTWLSKNNTMWINSTMYSLAISMVCL-PLMNQPCDSSLNMS-LLFFSDPLSTPLLLLTTWLLPLMIIASQYHLSKEPTPQKKLYITMMVLLQIFLIMTFSATELIMFYILFEATLVPTLIIITRWGGQTERLNAGIYFLFYTLAGSLPLLVALIYTQTTTGSLNLLLAQYWNQNPT-QMW-----ACSALWVAYMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITPVLSP-TANYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAILIQSPWGYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQMILPLMAAWWLLASLMNLALPPSINLIGELFVTMAMFSWSYFSIILLGINIIITALYTLYMLIMTQRGKYTYHIHNIKPSFTRENTLMALHLVPLLLLMIKPQIILGNMY------MNMFSAM-MLLSLIILTLPLINN---TKTNPNL-KSYPEYVKTM-ISYSFIISLLPAIMFIYSGKEMMISNWHWMTIQTMKLSLSFKLDFFSMMFVPIALFITWSIMEFSMWYMHSDPNINKFFKYLLMFLITMLILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFIMSMAWFMAKVNSWEMQQIFMLSTE-DTTLPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPMMENNNAILTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLFKPMPFTTTALIAGSLALTGMPFLTGFYSKDMIIEAANTSYTNAWALLLTLVATS-LTAIYSSRIIFFALLGKPRFSSLITISENNPLLINPITRLLIGSIFAGFIISNNILPSTVPQMTMPMYLKITALLVTLMGFTLAMELNYFTQNLK--STHSTSSLKFSSLLGYFPSIMHRINPLMTLHTSQKSATMLMDLIWLENMLPKLTAKIQQNLST--TVSAQEGLVKSYFMS---FLITL--TIAITTL----------NFLE---- +>Globicephala_macrorhynchus_short-finned_pilot_whale +----MNENLFASFMVPI-TLGIPITTLIIMFPTMLFPTPN-RLINNRMITIQQWLTKLTSKQLMVTHNPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTAQLSMNLGMAIPLWAGTVFIGFRNKTKMSLAHLLPLGTPTFLIPMLVMIETISLFIQPLALAVRLTANITAGHLLLHLIGSATLALMS-INLFTALITFIILTLLVILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMI-FTLFALLQLKISKHFYSP-LPKPV-DTKLQKQ-QIP-W-NHTWTKIYLP-LS---------MFANRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQLYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTLYQTPLFVWSVLVTAILLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMVSHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWAKIQFMIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVLIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFEEPVYVNL-KYS------MAYPFQLGLQDAASPVMEELLQFHDHALMIVFLISSLVLYIITLMLTTKLTHTNTMDAQEVETIWTVLPAVILIMIALPSLRILYMMDEINNPSLTVKAMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMVLPMQMTIRMLISSEDVLHSWAVPSLGLKTDAVPGRLNQTTLTSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSMILLTLSFLTNTLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEILFFTGFFWAFYHSSLAPTPELGGSWPPTGIRPLNPLEVPLLNTSVLLASGVSITWAHHSLMQGNRKHMLQALLITITLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMLFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNTFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWFIRYLHANGASMFFICLYAHIGRGLYYGSYMFQETWNIGVLLLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVAVHLLFLHETGSNNPMGIPSNMDMIPFHPYYTIKDILGALLLILALLTLTLFTPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILIFIPMLQTSKQRSMMFRPFSQLLFWTLIADLLTLTWIGGQPVEHPYIIVGQLASILYFLLILVLMPTVSLIENKLL---KW--------MF--------MINILTLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFMIAPVLALTLALTMWAPLPMPHPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLNTTQEKLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGAFHDPYTPELCTTNLIVKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTAGI-P-PQT--MNP-FISITLLTTLVLSTTIVTISSHWLFAWIGLEMNMMAIIPIMMKKPNPR-ATEASAKYFLTQATASSLLMLAIIINLMHSSQW--TIMKLFDPTASILMTMALAIKLGLSPFHFWVPEVTQGIPLSTGLILLTWQKLAPISILYQISPSVNLHLMITM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILPYNPTFTLLNLLIYITMTFTMFMLLIQNSTTTTLLL---SQTWNTMPIMTTFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPTLMAITALLNLYFYMRLVYSTALTLFPSTNNMKMKW-QFYSMKQMTLL-------PTAIVLSTMLLPLTPTLLTLL---MN-LLLTLLTNTTLALLLMLIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIAILLPLPWAIQTNNLTTMLLTALFLISLLAASLAYEWTQKG--LEWDK-MSLVHINILIAFMVSLTGLLMYRSHLMSALLCLEGMVLSLFILATLTILNMHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKSNFIWINTTAHSLLISFTSL-LLLNQFNDNSLNYS-LTFFSDPLSAPLLMLTMWLLPLMLMASQFHLLKEPLARKKLYITMLIMLQTLLIMTFTATELIMFYITFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALMYLQNTVGSLNFLLLQYWAQPLS-TSW-----SNTFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTEHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFFPLMTTWWLLACLTNLALPPTINLIGELLVIMSTFSWSNLTIILMGMNIVITALYSLYMLIMTQRGKHTHHINNLTPTFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSSTTLLTLLMLIAPVMTS---STDFYKN-NKYQHYVKNM-TLLAFITSLIPMMMFIHTNQEMLISNWHWTTIHTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLHNTNAWDLQQIFTLNQN-PPILPLMGLTLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNKFIQTTMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGLNQPHLTFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALIIGCFALTGMPFLTGFYSKDLIIEAATSSYTNAWALLLTLIATS-MTATYSTRIIFFTLLEQPRFPPLMNINETNPMLINPIKRLLIGSIFAGFILSNSMPPMNTPLMTMPLYLKLTALMVTTLGFTLAFEINTYSKNLK--YPCPSDSTKFSTLLGYFPTIMHRLTPHLTLTMSQKFATSLLDLTWTEMILPKTTALIQLKAST--LTSNQKGLIKLYFLS---FLITM--TLIMLLF----------NYPE---- +>Tetracerus_quadricornis_four-horned_antelope +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLMNNRLIALQQWILQLISKQMMSIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVFTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIMFQLKISKHNFHH-NPELS-PTKMLKQTSTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNETWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPTYINL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHTYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTILLMLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG---MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFASVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMIHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGALLLILALMMLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPLSQCLFWILVANLLTLTWIGGQPVEHPYIIIGQLASIMYFFLILVLMPTASMIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYLPELYTINFTIKALLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILLTIMMGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKYNPR-ATEASTKYFLTQSTASMLLMMAVIINLLFSGQW--TVMKLFNPMASMLMTMALTMKLGMAPFHFWVPEVTQGISLSSGLILLTWQKLAPMSVLYQISPSINLNLMLTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKAPIMTVLILTTLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTFMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSSTKHMTLL-------PTMVVLSTMLLPLTPMLSVLE---MN-LMLALLTNFTLATLLVTIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLSTMLTMALLLILLLAASLAYEWTQKG--LEWTE-MSMVYMNIMMAFTVSLVGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTTHSLLISLTSL-LLMNQFGDNSLNFS-STFFSDSLSTPLLILTMWLLPLMLMASQSHLSKENLTRKKLFITMLILLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVHIQNTVGSLNFLMLQYWVQPMP-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLFLNP-VTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVTSTFSWSNITIILMGTNMVITALYSLYMLIMTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGSLY------MNMFSSF-TLMTLLLLTMPIMMT---SSNTYKT-SNYPLYVKTA-ISYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDFQQIFTLNPN-DSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPMTENNKFAQSTMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTMGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSHTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIMINENNPLLINSIKRLLIGSLFAGFIISNNIPPMTVPQMTMPPYLKMTALAVTILGFILALEISNMTQNLK--FHHPSNTFKFSNMLGYFPTIMHRLTPYMNLTMSQKSASSLLDIIWLENILPKTTSLIQMKTST--MITNQKGLIKLYFLS---FLITI--MISMILF----------NFHE---- +>Mus_musculus_molossinus_Japanese_wild_mouse +----MNENLFASFITPT-MMGLPIVVAIIMFPSILFPSSK-RLINNRLHSFQHWLIKLIIKQMMLIHTPKGRTWTLMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVITGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIMSSM-ITLFILFQLKVSSQTFPL-APSPK-SLTTMKV-KTP-W-ELKWTKIYLP-HS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGFTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLIMIFMIWEAFASKREVMSVSYASTNLEWLHGCPPPYHTFEEPTYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSITLLTLGLLTNILTMYQWWRDVIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGISPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITIMLGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNMRKTHPLFKIINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGLYYGSYTFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILIMFLILMTLVLFFPDMLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALMPFLHTSKQRSLMFRPITQILYWILVANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIEDKML---KLYP------MF--------FINILTLLVPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPTLSLTLALSLWVPLPMPHPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSYSLQTLITTQEHMWLLLPAWPMAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTTIIFLGPLYYINLPELYSTNFMMEALLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIFTAGV-P-PYM--MNP-ITLAIIYFTIFLGPMITMSSTNLMLMWVGLEFSLLAIIPMLINKKNPR-STEAATKYFVTQATASMIILLAIVLNYKQLGTW--MFQQQTNSLILNMTLMALSMKLGLAPFHFWLPEVTQGIPLHMGLILLTWQKIAPLSILIQIYPLLNSTIILML-AITSIFMGAWGGLNQTQMRKIMAYSSIAHMGWMLAILPYNPSLTLLNLMIYIILTVPMFMALMLNSSMTINSI---SLLWNKTPAMLTVISLMLLSLGGLPPLTGFLPKWIIITELMKNNCLIMATLMAMMALLNLFFYTRLIYSTSLTMFPTNNNSKMMT-HQTKTKPNPMF-------STLAIMSTMTLPLAPQLII-----MN-LYTVIFINILLSLALILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTIKTSTMMIMAFILVTILSLGLAYEWTQKG--LEWTE-MPSTFFNLTMAFSLSLLGTLMFRSHLMSTLLCLEGMMLSLFIMTSVTSLNSNSMSSMPIPITILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIILPSLMLLPLTWLSSPKKTWTNVTSYSFLISLTSL-TLLWQTDENYKNFS-NMFSSDPLSTPLIILTAWLLPLMLMASQNHLKKDNSVLQKLYISMLISLQILLIMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLSAGIYFLFYTLIGSIPLLIALILIQNHVGTLNLMILSFTTHTLD-ASW-----SNNLLWLACMMAFLIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGSYGMIRISIILDP-LTKYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVIASIMIQTPWSFMGATMLMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMATWWLIASLANLALPPSINLMGELFITMSLFSWSNFTIILMGINIIITGMYSMYMIITTQRGKLTNHMINLQPSHTRELTLMALHMIPLILLTTSPKLITGLTM------MNIFTTS-ILLIFVLLLSPILIS---MSNLIKY-INFPLYTTTS-IKFSFIISLLPLLMFFYNNMEYMITTWHWVTMNSMELKMSFKTDFFSILFTSVALFVTWSIMQFSSWYMHSDPNINRFIKYLTLFLITMLILTSANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMVWFSLNMNSWELQQIMFSNNN-DNLIPLMGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPLTTNNNLILTTMLCLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGMNQPHLAFLHICTHAFFKAMLFMCSGSIIHSLADEQDIRKMGNITKTMPFTSSCLVIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALLITLIATS-MTAMYSMRIIYFVTMTKPRFPPLISINENDPDLMNPIKRLAFGSIFAGFVISYNIPPTNIPILTMPWFLKTTALIISVLGFLIALELNNLTMKLS--MSKPNPYSSFSTLLGFFPSIIHRITPMKSLNLSLKTSLTLLDLMWLEKTIPKSTSTLHTNMTT--LTTNQKGLIKLYFMS---FLINI--ILIIILYSI---------NLE---- +>Physeter_catodon_sperm_whale +----MNQNLFTSFMTPV-MLGIPIITLIIMFPTILFPAPT-RLINNRTISIQQWLTKFRSKQLMITHNSKGQTWSLLLVSLILFITSTNLLGMLPHSFTPTTQLSMNMGMAVPLWAGTVIMGFRNKTKASLAHFLPQGTPTFLIPMLVIIETISLLIQPVALAVRLTANITAGHLLMHLIGMATLALMS-ISLFTAFITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFLTILSVM-LTLFTLLQPKISMHLYTP-NPKPM-PTKTQKQ-HSP-W-NTAWTKIYLP-LL---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRTELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSILVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMISIGFLGFIVWAHHMFTVGMDVDTRAYFTSVTMIIAIPTGVKIFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDVVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDPTWAKIHFLIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFIIWEAFASKREVTSMHLTSTNLEWLNGCPPPYHTFEEPVYINP-KWS------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHINTMDAQEVETIWTVLPAIILILIALPSLRILYMMDEINSPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGDLRLLEVDNRMVLPMEMTIRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSISML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTILLALGLLTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMVLFILSEILFFTGFFWAFYHSSLAPTPELGGCWPPTGICPLDPFKVPLLNTSVLLASGVSITWAHHSLMQGDRKQMLQALFITIALGLYFTLLQASEYYETPFTISDGVYGSTFFVATGFHGLHVIIGSTFLTVCFLRQMKFHFTPNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIINNAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTTTAFSSITHICRDVNYGWTIRYLHANGASMFFICLYTHMGRGWYYGSYIFQETWNVGMMLLITVMATAFVGYVLPWGQMSFWAATVITNLLSAIPYIGTTLVEWVWGGFSVDKATLTRFFTLHFILPFITLTLTMVHLLFLHETGSNNPTGIPSNMDKIPFHPYHTIKDTMGALLLILSLLTLTLFAPDLLGDPDNYTPANPLNTPTHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILVFIPMLHTAKQRSMMFRPFSQFLFWTLIMDLLTLTWIGGQPVEHPYVTVGQLASILYFLLILILMPTASLIENKLL---KW--------MF--------MINILMLTLPILLAVAFLTLVERKTLGYMQLRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPMLALILALTMWSPLPMPYPLINMHLGILFMLAMSSLTVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSALATTQEQLWLLLPLWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMLSTILFLGTYHNPYTPELHTTNLILKTLLLTMSFLWIRASYPRFRYDQLMHLLWKSFLPLALALCMWHISLPIMTAGT-P-PQT--MNP-FISIITFTTLILSTTIVVISSHWLFAWVGFEMNMMAIIPIMMKNFNPR-TTEASTKYFLTQATASALLMMAIMINLSHSGQW--TITKLFNPTASMLVTIALAIKLGLSPFHFWVPEVTQGIPLSTGLVLLTWQKIAPLSILYQISPSINMNLMLTM-SLLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILPYNTTMTLLNLLIYVTMTFTMFTLFIQNSTTTTLSL---SQTWNKTPITTTLTMLTLLSMGGLPPLSGFIPKWMIIQELTKNEALIMPTFMATTALLNLYFYMRLTYSTALTLFPSTNNMKMKW-QFYPTKRMTLL-------PTAIVMSTMLLPLTPMLSTLL---MN-ILLTLLTNTTLALLLMLIAFWLPQLNAYTEKTSPYECGFDPMQSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQMNNLKTMLTTALFLISLLAASLAYEWTQEG--LEWAE-MSLIHMNVMMAFSMSLVGLLMYRSHLMSALLCLEGMALSLFIFTTLTTLNLHFTLANMAPIILLVFTACEAAIGLALLVMISNTYGTDYVQSLNLLQCMLKFIIPTIMLMPLTWLSKNNLIWINSTTHSLLISFTSL-LLLTQSNDNNLNYS-LTFFSDPLSTPLLILTMWLLPLMLMASQSHLLKEPLARKKLYITMLITLQVFLIMTFTATELILFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLLGSLPLLVALTYLQNTTGTLNFLLMQYWTQPLS-TSW-----SNTFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITPMLNP-LTEHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVITAILIQTPWSYMGATTLMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFLPLMATWWLLASLTNLALPPTINLIGELFVMMSMFSWSNLTIILMGTNIVITTLYSLYMLITTQYGKHTYHVNNLTPSFTREHTLMALHIIPLLLLSLNPKIILGPLY------MNLFTSF-TLLTLLILIIPVITP---STNIHKS-NKYQTYVKNT-VSCAFLTSLVPMTMYLHTNQEVLISNWHWITIQTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPHINLFFKYLLLFLITMLILVTANNLFQLLIGWEGVGIMSFLLIGWWFGRTNANTAALQAILYNRIGDIGFLTSMAWFLSNMNTWDLQQIFALNQN-TPNLPLMGLMLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKLAQTTALSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTVGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPFTTTALITGCLALTGMPFLTGFYSKDPIIEAATSSYTNAWALLLTLTATS-LTAVYSTRIIFYTLLNQPRFPPHITINENNPSLINPIMRLMLGSIFAGFILSNNIPPMTTPLTTIPLYLKLTALTMTTLGFIIAFEINLNTQNLK--YNLPSNPTKFSLSLGYFPTIMHRLPPDLYLTMSQKLATSSLDMTWLENILPKTTALIQLKASM--LTSNQQGLIKLYFLS---FLITI--TLFTLLL----------NCPG---- +>Aotus_lemurinus_gray-bellied_night_monkey +----MNQNLFTSFNVPV-ILGIPLVVLIILFPTTLIMPSN-KLINNRLSSLQQWLVQLTLKQMMMVHTNKGRTWSLMLLALISFIALNNLLGLTPYAFTPTTQLSMNLGMAIPLWAATVFMGLRFKTKASLAHFLPQGTPVPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLLGDTALTLMS-IYMSSSTITIIIIILLITLELGVALIQAYVFTLLVSLYLHDNSMPQLDISPWPMVILSMI-VALFYFIQLKLLNFTFHS-IPSSK-PMKTQKH-KTT-W-ELKWTKIYLP-LS-TYQ-----MFMNRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRAELGQPGSLMEDDHVYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLNQTYAKIHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIISSVGSFISLTAVILMIFMIWEAFSSKRKVSTIEQLSTNLEWLYGCPPPYHTFEESTYVKTLAEKG-----MATPAQLGLQNATSPIMEELIAFHDHALMIIFLISSLVLYIISLMLTTKLTHTSTMNAQEIEMIWTILPAIILIMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYEDLAFDSYITPTYFLEPGEFRLLEVDNRTTLPMEADIRMLITSQDVLHSWAVPSLGVKTDAIPGRLNQAMLASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWAS-------------MTHQTHAYHMVNPSPWPLTGALSAFLLTSGLIMWFHFYYTLLLATGLLASAMTMFQWWRDVVREGTYQGHHTPPVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPQTGGHWPPTGILPLNPMEVPLLNTAVLLASGVTITWAHHSLMEANRKESAQALFMTIALGAYFTYLQMSEYSETSFTISDGIYGSTFFMATGFHGLHVIIGTTFLATCYIRQQMYHFTSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTSPRKTHPLTKIINESFIDLPTPPNISSWWNFGSLLGICLIIQITTGLFLAMHYTPDTSTAFSSVAHITRDVNYGWMIRYMHANGASMFFVCLFLHIGRGLYYGSFLSLKTWNIGTILLLTTMATAFMGYVLPWGQMSFWGATVITNLMSAIPYIGSDLVQWIWGGFSVDKATLTRFFTFHFILPFIIAALATIHLLFLHETGSSNPSGMTSDPDKITFHPYYTAKDILGLIFLLLSLMSLTLFMPDLLTDPDNYTLANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILMVIPMLHLSKQQSMMFRPITQILFWTLVADLLTLTWIGGQPVEYPFVTIGQTASITYFFIIIILMPLSASIENMLL---KW--------MF--------MINLLLLVIPALIAMAFLTLMERKILGYMQFRKGPNIVGPYGLLQPIADAMKLFTKEPLLPTTSASTLYVTAPTLALSIALLMWTPLPMPHPLINFNLGLLFMLATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLHSLIVTQEHSWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFLATSHNITMPELYTINFVAKTVLLTSLFLWIRTAYPRFRYDQLMHLLWKKFLPLTLALCMWYISMPILMSGI-P-PQT--MNP-LAYLVISFTILMGTLITTLSSHWFLIWMGLELNMLAIVPILAKNTSPR-STEASTKYFLMQATASMILLMAIFLNTLFSGQW--TINPSLNKILSTMMLIALVMKLGMAPLHFWLPEVTQGIPLMPAMLILTWQKLAPMSIILQIFPPMNLNTLLMI-SILSIMAGSWGGLNQTQLRKIMAYSSITHMGWMMAVLYYDPNITILSLIIYIFLTISTFMMFYMNSNLTTLSL---SHSWNKLTWMMPMIPLMMMSLGGLPPLTGFSPKWAIMQELTKNDNLIFPLTMAMLTLMNLYFYMRLTYSISMTMFPSSNNTKINW-QLKYMKLTPLL-------SPLMVSSTFLLPVTPLMLMV----MN-LALTLATNILLALLLITVTFWLPQLNMYAEKHNPYECGFDPTTSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQMNNLMLTVNMILALLVILALGLAYEWTQKG--LEWIE-MPFIYINVLLAYFMSLLGLLIYRSHLMSSLLCLEGMMLSLFIMATLTTLNMHLTLMYMMPIVLLVFAACEAAVGLALLVLISNLYGLDYVQNLNLLQCMLKIILPTIMMLPMMWLSKTHMMWINMMISSLLISAFTL-MSLHMPN-ISCNLS-LNFFSDPLTSPLLTLTAWLLPLMILATQQHLYNNPLPRKKLYMSMLILLQISLIMTFTATELILFYILFETTLIPTLIIITRWGYQPERLNAGSYFLFYTLAGSLPLLITLLYHLGNLGSLNMLTMMMYTKETL-LSW-----TNNIMWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITPILNP-LTEKMGYPFLILSLWGMVMTS--SICLRQADLKSLIAYSSVSHMALVILAILIQTPWSFTGAMILMIAHGLTSSLLFCLANSNYERIHSRTMMFTRGLQTLFPLLALWWLLANLANLALPPTINLMGELFTILASFSWSNFTIMFTGFNMLITALYSLHMFTSTQRGPLTYSTSNVKPLFTRENTLMIMHMAPILLLTLDPKTIMGLTP--------MHSSL-ILMTLIPLLAPITIT---LINSHKN-SLYPHYVKLA-IIYALIISILSTTMFIFTGQESMISNWHWMTIQTIKLSMSFKLDFFSMMFTPVALFVTWSIVEFSMWYMSSDPNINQFLKYLLIFLVTMLILITANNLFQLFIGWEGMGIMSFLLISWWHGRTDANTAALQAILYNRIGDIGFILAMAWFFLYSNSWNFQQMFILDST-SNSFPLMSLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLIIRFHPLIENNLLTQTLILSLGAITTLFTAICAITQNDLKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLSAGSIIHSLNNEQDIRKMGGLFKTLPFTASSLVIGSLALMGTPFLTGFYSKDLIIETANTSYTNAWALTTTLVATS-LTAMYSIRIISHTMTGHPRFSTLITINENNPQLMNPINRLALGSIFAGFLISSCIPPTSQPQVTMPHHLKLTALSVTILGLFLAMELSFMTNNMK--LSTPVKTFYFSNMLGFYSITTHRINPHSSLTASQNLTSTLLDLFWFEKTMPKLTMQTQISIST--TTSTQKGLIKLYFLS---FFIPP--TLALILTI----------------- +>Capra_caucasica_West_Caucasian_tur +----MNENLFTSFITPM-VLGLPLVTLIISFPSLLFPSSN-RLINNRLISLQQWALQLVSKQMMSIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTN-ISPTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTTILSMF-LALFIIFQLKISKHDFYH-NPELT--TKVLKH-NTP-W-ETKWTKIYLP-LL-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDTVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVTL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSTALLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIMLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWVWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGVMLLILVLMLLVLFTPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLVPFLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVMMPVASTIENNLL---KW--------MF--------MINILTLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINFIIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IISIIILMTIMLGTTIVMISSHWLLIWIGFEMNMLTIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVTKLFHPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILPYNPTMMLLNLIIYIIMTSTMFLLFMANSTTTTLSL---SHTWNKMPIMTTLVLVTLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFSITKRMTLL-------PTLTVLSTMLLPLTPILSILE---MN-LMITLLTNFTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMTAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNSMIWINSTLHSLLISFTSL-LLMNQFGDSSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLLKESPTRKKLFISMLVLLQLFLIMTFAATELIFFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIHIQNTVGSLNFLILQYWAQPVP-NSW-----SNVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITLLLNP-ITDYMAYPFIVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKHTHHINNILPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSL-ALTTLTLLTAPIMMT---NLNIYKS-TNYPLYVKTV-VSCAFITSMIPTMMFIHTGQEMVISNWHWLSIQTLKLSLSFKMDYFSVMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILTMAWFLINLNTWDLQQIFMLKPE-DSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYINAWALLMTLVATS-FTAVYSTRIIFFALLGQPRFPALININENNPFLINSIKRLLIGSLFAGFIISNNIPPMTIPQTTMPHYLKMTALAVTTLGFILALETANMTHHLK--FNYSSNTFKFSNLLGYYPMIMHRLTPYMNLMMSQKSASSLLDLIWLEAILPKTISQAQMKMAT--TTTNQKGLIKLYFLS---FLVTI--LVSTILF----------NFHE---- +>Prolemur_simus_ +----MNENLFASFITPT-IVGIPIVIFIIMIPSIIFPSPT-RLINNRLTSLQQWLVRLILKQLMSIHSIKGQTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAATVIKGFRHKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTS-ISPATASITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITIFSMI-LTLLIVFQLKISKFNYPF-KPTMK-DINKHLY-SNP-W-ETKWTKIYLP-LS-LPQQS---MFINRWFYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGSLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSIGSFISLTAVMLMIFMVWEAFSSKREVLMVELTPTNLEWLHGCPPPYHTFEEPTYVKA----------MAYPVQLGFQDAASPIMEELLYFHDHTLMIMFLISSLVLYIIFLMLTTELMHTNTMDAQEVETVWTILPAAILILIALPSLRILYMMDEITTPSLTLKTMGHQWYWSYEYTDYENLSFDSYMTPSSDLKPGELRLLEVDNRVVLPTELSIRMLISSEDVLHSWAVPSLGVKTDAIPGRLNQTTLMASRPGIYYGQCSEICGANHSFMPIVLELVPLKHFEEWLLSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLAMWFHFNSSTLLLLGMLTNLLTMYQWWRDVVREGTFQGHHTSIVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGNRVQMLQALLITITLGLYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFFRQLNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKNHPLMKIMNSSFIDLPAPSNISSWWNFGSLLGACLALQIITGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFLCLFIHIGRGLYYGSFTLSETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMVHLLFLHETGSNNPLGTSSDSDKIPFHPYYTIKDLLGLVLLILLTMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILAIIPMLHTAKQRSMTFRPLSQYLFWMLTADLFILTWIGGQPVEHPFITIGQMASILYFSLILIIMPMASLIENKML---KW--------MF--------MINLLLLIIPIMLAMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPIPYPLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHMPETYTTGFAIKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLASCI-P-PQV--MKP-IILVLIMLTIFTGTMLTMISSHWLLMWIGLEINMLAIIPILMKKINPR-STEAATKYFLTQATASMLLMFSIVVNAMNSGQW--GITNMHNQLISLTVTAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQIYPTMNPNILLLI-ATLSILVGGWGGLNQTQLRKILAYSSIAHMGWMMAILMYCPSLTILNLLIYLMLTIALFSMLNININTTTLTL---SNMWNMTPAIIFTILISLLSLGGLPPLTGFLPKWAIIQELTKNSNIMLATTMAIMALLNLYFYMRLIYSTSLTMFPTLNNTKMKW-QFQQTKQMFLL-------PLLITLATLTLPLSPTILTLN---MN-LPLALTTSITLALLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLKLMLTVALVLITILAAGLAYEWLQKG--LEWVE-MPSISTNIILAFITALLGMLIFRSHLMSSLLCLEGMMLSMFILSTLTIISLHFTTSFMMPILLLVFAACEAAVGLALLVTVSNTYGLDYIQNLNLLQCMLKFIIPTIMLFPVTWYSGNSMIWINTTLHSLLISLAGL-SLLNQFNDTNNNFS-LTFFTDPLSSPLVILTMWLLPLMIMASQHHLMKESWTLKKLYISMLISLQMLLVMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYTQNHLGSLNLSTMILCFQELP-NSW-----SNNLLWTACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMMLNP-MTKYMAYPFLMLCLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATILMIAHGLTSSMLFCLANSNYERIHSRTMLLARGIQTLLPLMATWWLLASLTNLALPPSINLIGELFVTMASFSWSNITIILMGLNMLITALYSLYMLTTTQRGKLTYHSHNLNPSFTRENTLMSMHMLPLILLTLNPKIILGPTY------MNLLSSF-TLVTLIILTFPIIMN---ITNICKD-YPYAPYVKSS-IACAFVTSLIPTMLFIYSGQETIISNWHWITIQTLKLSISFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPNMNQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLMYSNTWEFQQMFMLNYS-PNMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNKTIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMITMGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKPMPFTSSSLMIGSLALTGMPFLTGFYSKDLIIESANTSNTNAWALMITLIATS-MTAIYSTRIIFYALLGQPRFTTLTPINENNPLLINSIKRLTLGSIFAGFFLTNNILPMNTPQMTMPFYLKMTALMVTITGFALAMELNLMTNNLK--FKLPSYTYKFSNSLGFYPMTMHRLIPLSNLTMSQNTASLLLDLIWMEKTMPKNLSQLQMMSST--TISNQMGLIKFYFLS---FLTSL--LLTLLLII----------------- +>Hemitragus_jayakari_Arabian_tahr +----MNENLFTSFITPM-MLGLPLVTLIVLFPSLLFPTSD-RLVNNRLISLQQWLLQLVSKQMMSIHNTKGQTWTLMLVSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHLLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMT-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWPTMILSMF-LILFIMLQLKISKHNFHY-NPELM-TTKTPKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWTKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSTALLALGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTPDTMTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFMHVGRGLYYGSYTFLETWNMGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFILPFMIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTVKDILGAMLLILTLMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALVPFLHTSKQQSMMFRPISQCMFWILVADLLTLTWIGGQPVEDPYITMGQLASIMYFLIILVMMPMASTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFTKEPLRPATSSISMFILAPVLALTLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNMFTTTLFLGAFHNPYIPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-TISILILMTIMLGTIIVMISSHWLFIWIGFEMNMLSIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TAMKLFNPTASMLMTTALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKTPIMTILVLTTLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYTRLMYSTTLTMFPSTNNIKMKW-QFSTTKRMTLL-------PTMTVLSTMLLPLTPILSILQ---MN-LMITLLTNFTLATLLMAIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIILLAASLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSFTGLLMYRSHLMSSLLCLEGMMLSLFVMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIISTMMLMPLTWLSKNNMIWINSTLHSLLISLTSL-LLMNQFGDNSLNFS-STFFSDSLSTPLLILTMWLLPLMIMASQHHLSKESLARKKLFISMLILLQLFLIMTFSAAELILFYVMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALMYIQNTMGSLNFLILQYWVQPMP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-ITNFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVTSTFSWSNITIILMGLNMMITALYSLYMLIMTQRGKYTYHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFPSL-TLATLILLTTPIMTT---SLSTHKS-TNYPLYVKTI-TSYAFITSMIPMMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRVGDIGFILTMAWFLTNLNTWDLQQILMLKPD-NSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLVQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPLLTNSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPYYLKMTALMITILGFILALEISNTTHYLK--FNHPSNMFKFSNLLGYYPTIMHRLTPYMNLTMSQKTASSLLDLIWLETILPKTISLTQTKMST--TITNQKGLIKLYFLS---FLVTM--LVSTILF----------NFHE---- +>Dendrohyrax_dorsalis_Western_tree_hyrax +----MNENLFTSFTTPS-TMGLPLEILIILFPAMLYPTPN-RLVNNRLIATQQWLTTLIMKQLMTTHNNKGRTWALMLMSLILFIASTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVLLGFRHKTKASLAHFLPQGTPITLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLMGSTTLTLMN-ISQTATAISFMVLFLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLNTTPWPMIIATMI-LTLFIVMQTKISKYSYPN-DLTPK-PTKKLIK-HTP-W-ETKWTKIYLP-PS-LLLQQ---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGSPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLASNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPATTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNINTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNINWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYALNLTWAKIHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMMFIVWEAFASKREICTVELTTTNLEWLNGCPPPYHTFEEPAFVKP-C--------MPYSTQLGFQDATSPIMEELLHFHDHTLMIVFLISTLVLYIISAMLSTKLSNIRALDAQGVETIWTILPAMILILIALPSLRILYMMDEINDPSLTVKTIGHQWYWSYEYTDYEDLTFDSYMIPTEELKPGELRLLEVDNRVVLPMEMPVRMLISSEDVLHSWTIPSLGLKTDAIPGRLNQATLMSTRPGLFYGQCSEICGSNHSFMPIVLEMVSLKTFENWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFKSPTLLSLGLLTNTLTMYQWWRDIVREGTFQGHHTPNVQKGLRYGMVLFIISEVFFFTGFFWAFYHSSLAPTPELGGCWPPTGVNPLDPMEVPLLNTSVLLASGVTITWAHHSLMEGNRKHMIQALSMTIALGVYFTLLQASEYYETPFSISDGIYGSTFFVATGFHGLHVIIGSTFLMVCLLRQLKFHFTSDHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKNHPLLKTINNAFIDLPTPPNISTWWNFGSLLGACLIVQILTGLFLAMHYTSDTTTAFTSVSHICRDVNYGWMIRYLHANGASMFFVCLYAHIGRGIYYGSYLYSETWNIGVLLLLATMATAFMGYVLPWGQMSFWGATVITNLLSALPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIMPFIIVALAMVHLLFLHETGSNNPLGLISNADKIPFHPYYTMKDLTGMVLLILTLLTLTLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLLAYAILRSIPNKLGGVIALISSILILMLLPLIHTSKQRSLMFRPISQFLFWLLVADLLTLTWVGGQPVEHPYTTISQMASVSYFTIFLVLMPMAGLIENRML---KL--------MF--------MMNMLSMILPVILAMAFLTLTERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPSTSSKLMFTIAPVLALTLALTLWTPLPMPYPLINMNLSTLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVSLTIILISVLLMNGSFTLMTLSTTQEHMWLLVPLWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNTLTAIMFLGAMNDPYMPETYTTSLILKTLILTMGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHIAMPIMLASI-P-PQM--MNP-LTLSVTITTLFAGTMIVMLSSHWLTTWLGLEVNMFAIIPIMTTPSNPR-SIEAATKYFLTQVTAAMILMMGIMINFLHSGQL--SIQELHNPLASNMILLSMMMKLGLAPFHFWVPEVAQGVKLLPSMMLLTWQKLAPLAILYQTAASMNITLITLS-GMLSIALGGWGGLNQSQLRKILAYSSISHMGWMIIILAYNPTMMTLNLILYITMTLSIFMMIMNNHTTTINSM---SMMWSKNPAMATLLMITLLSLGGLPPLSGFIPKWMIIQEMTKNNMIIMSLTMAITALLNLYFYVRLIYISSLTIFPSMNSMKMSW-QHTNPKYLTLA-------PTLIIMSTLMLPLTPMLFTLE---MN-LAIALITNTLLASLLVTIAFWLPQLYLYSEKVSPYECGFDPVGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQMNNLDLMFPMSMTLISLLALGLAYEWSQKG--LEWTE-MHYIYINIIIAFSMSLLGALLYRSHIMSSLLCLEGMMLALFVMSTLIALNLHFTLATIMPIILLVFAACEAAIGLALLVMVSNTYGLDYVQNLNLLQCMLKIIMPTLMLIPLTWMSKQNCMWINTTTYSFTISLLTLMLLLNQTHEPGLNFS-TTFFSDALSTPLLILTTWLLPLMLMASQHHLMHEPMTRKKTYMTMLISLQLLLIITFTATELILFYIMFESTLIPTMIVITRWGNQSERLNAGLYFLFYTLLGSLPLLISLLYMQNTLGSLNILVSPYYTNNLP-NSW-----STNLMWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIFLDP-LTKSMAYPFLLLSMWGMIMTS--SICMRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSYMGATTLMIAHGLTSSLLFCLANTNYERMHSRTMILARGLQTLLPLMSTWWILASLTNLALPPSINLIGELLVITSTFSWSHTTLFLMGLNMLITATYTMHMLTTTQRGKPSHHNKNTIPTFTRENTLMTLHLAPLILLPINPTIIMGTCY------MNLFMTS-ILLALLVLTIPVMTS---TTHTYKT-KQYPNYVKTT-TMCSFMISMIPALTFIMSNQEMVISNWHWMTMHTLNLTLNFKLDYFSLIFTPIALFVTWSIMEFSLWYMHSDPNLNKFFKYLLMFLITMMILVTANNLFQLFIGWEGMGIMSFMLISWWYGRADANTAAMQAILYNRIGDIGFVLSMTWFLLHHNSWELQQIFMISPK-ET-LPMLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLETNKLVQTLTLCVGAMTTLFTAICALTQNDIKKIVAFSTSSQLG--LMTVTVGINQPYLAFIHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLYKTMPFTTTSLIIGSLSLTGMPFLTGFYSKDLIIESINTSHVNAWALLITLTATS-MTAMYSTRIIFFALMGQPRYPPLILINENNIPMTNSIKRLAAGSIVSGYLLSISLCPMSTTQMTMPPYMKLTALIITLTGFTLAMELNNITHHLK--LYPPKYPYKFSTMLGYFSTIIHRLLPHLGLNASLTAASNAMDLIWLEKLLPKGLASLQKMASI--TTSNQKGLIKLYFLT---FLLSM--TTGILLTL----------------- +>Desmodus_rotundus_common_vampire_bat +----MNENLFASFITPV-MAGLPIVTAIIMFPTLLFPSTG-RLVNNRLVAIQQWLLRLTAKQMLSLHNPKAQTWALMLMSLIMFIGSTNLLGLLPYSFTPTTQLSTNLSMAIPLWAGTVILGFRRKTKTSLAHFLPQGTPLTLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMD-INMSVSFITFVILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSTTVFSTV-LALFTIMQLKISTYLYHT-EPEPK-SAKMATP-QTP-W-ETKWTKTYSP-LS-LPL-----MFVTRWLFSTNHKDIGTLYMMFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTIEAGAGTGWTVYPPLAGNLAHAGASVALAIFSLHLAGVSSILGAINFITTIINMKPPATSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLSDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLKGIVLANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLSETWAKIHFLVMFVGVNTTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMVFMVWEAFIAKREVLLVESTTTNLEWLYGCPPPYHTWEKPTYVHP-K--------MAHPFQLGLQDATSPIMEELLHFHDHALMIVFMISSLVLYIIASMLTTPLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPCMTVKAMGHQWYWSYEYNDYADLSFDSYMISTPDLKSGGLRLLEVDNRTVLPMEMTVRVLVSSEDVLHSWAIPSLGLKTDAVPGRLNQATLLSTRPGLYYGQCSEICGSNHSFMPIVLETVPLTHFEKWSTTMQ----------MTHQMHPYHMVNPSPWPLTGALSALLLTSGLAMWFHHNSVTLLVLSFLTNTLTIWQWWRDIIRESTFQGHHTPAVQKGLRYGMVLFIISEVFFFSGFFWAFYHSSLAPTPELGGQWPPTGITPLNPMDVPLLNTSVLLASGVSITWAHHSLMEANRKHTIQALLVTIILGLYFTFLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGTTFLSVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MAHPRKTHPLLKIINNSLTDLPTPSNLSTWWNFGSLLGVCLTTQILTGLFLAMHYASDTATAFNSVAHICRDVNYGWVLRYLHANGASMFFICLYIHVGRGLYYGSYTYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLSRFFAFHFLVPFIISALVAVHLLFLHETGSNNPTGIPSDPDTIPFHPYFTIKDILGFLMMLILLSALTLFSPDLLGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAILPFLHTSKQRSMAFRPLSQCLFWLLMATLLTLTWVGGQPVEHPYVIIGQVASILYFLTLLALMPLTSTMENRLL---KW--------MF--------LPNLLMTIAPILLAVAFLTLIERKILGYMQLRKGPLVVGPYGLLQPIADAMKLFTKEPLRPLTSSTTMFLLAPVLALTLALTMWIPMPMPHPLTNMNLSLLFMLAMSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAMILLSVLLMNGSYSLSSLILTQEHTWLMLPSWPLMMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNIIMMNTLTTTLFLGAYNNPNTPELYTTNLATKTLLLTTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHTTLPTTTAAT-P-PQT--MNP-LVSTTIMSTMILGTTIVMTSSHWLMVWMGFEMNMLAVIPMLTKTHHPR-STEAATKYFLTQTTASMLLMLAVITNLLDSNQW--TTTSMTNPTASTILTLALAMKLGLSPFHFWVPETTQGIPLFPGLILLTWQKLAPLSVLYDLYTNINPNLLLTL-SILSILVGGWGGLNQTQLRKIMAYSSIAHMGWMTAILIYNPTMTTLNLSIYITLTLTMFLLLISTKTTTTLSL---SHIWNKTPLITTIALTTLLSLGGLPPLTGFTPKWMIIQELTKNNNIILPTMMTMTALLNLYFYMRLTYATSLTMLPAANNTKTKW-HLTTTKQTTHL-------APLTITSTMLLPLTPMLSTLH---MN-MFITLLTNTLLATALTTLAFWLPQTNTYTEKLGPYECGFDPVSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQAKNLTTVLPLALMLMVLLALGLVYEWYQGG--LEWSE-MTLTHLNTLLAFAISLSGLLIYRSHMMSSLLCLEGMVLSLFMMMTMSTLTSQATLTNMLPIALLVFAAFEAALGLSLLVTVSNTYGTDHVQNLNLLQCMLKIITPTVMLIPLAWLSTTKTIWINTTMHSLMICILCL-PLTNQPTDNSLNFS-PLFFSDPLSTPLLMLTTWLLPLMIMASQSHLSKEPLVRKKLYITMLILLQTSLILTFTATELMMFYVLFEATLIPTLIIITRWGNQADRLNAGSYFLFYTLAGSLPLLVALTYIQSSMGTLNLLLMQHWTTPLQ-TSW-----NTNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMALAAILLKLGGYGILRITILLDP-ATEPMAYPFMVLSMWGMIMTS--SLCLRQTDLKSLIAYSSVSHMALVIAAALIQSPWSFMGATALMIAHGLTSSLLFCLANSNYERVHSRTMLLARGLQTLLPLTAIWWLLASLTNLALPPTINMIGELFVVMSMFSWSSPSITLMGLNILITALYSLYMLITTQRGKHSHHINNISPAYTRENTLAAMHILPLLLLSINPKIILGMLY------MNLTPST-TLMALATLIIPIVKTP--------DPKNYPYYVKTT-VLYSFLISMTSTTLYIWSNQETMISNWHWTTIQTLKLSLSFKLDFFSMLFMPVALFVTWSIMEFSMWYMASDPDINRFFKYLLTFLMTMMILVTANNLFQLFVGWEGVGIMSFLLIGWWYARADANTAALQAILYNRIGDVGFILSMAWFLTNSNTWELQQIFLLNPD-CPMLPLAGLILAAVGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLESNTLAQTTILIAGAITTLFAAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLHDEQDIRKMGGLFKTMPLTSTATTVGALALTGAPFLTGFYSKDAIIEAANTSYTNAWAILITLIATT-FTATYSTRMILHTLLGQPRSPGLTPINENNPLLLKPIKRLLAGSIFAGYLLSANIPPMTTPLMTMPTHLKLTALTVTLAGLILGLELSLMTLNLK--LTSPSSPTKFLSLLGYFPTILHRLPPAASLSMGQKSASTLLDSTWTEIILPKTASLLQTNLAA--LTSNQKGLVKLYFLS---FLITL--MLASTLLIP----------HA---- +>Trachypithecus_johnii_Nilgiri_langur +----MNENLFAPFTTPS-LLGLPAVIPIILFPTLLIPASK-ALINNRLITIQQNLIQMTLKQMMMTQSTKGQAWSLMLMSLFIFIAMTNLLGLLPHSFTPTAQLSMNLAMAIPLWAGTVITGLRFKTKSSLAHFLPQGTPTPLIPMLVVIETISLFIQPVALAVRLTANITAGHLLMHLIGNAALALSV-NNFLATPLILVLLMALMILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFITIITML-PALYLIMQLKLLKTTYYF-SPSQK-ASDMQLF-NNP-W-QLKWTKIYLP-PS-QLHHS---MLINRWLFSTNHKDIGTLYLLFGAWAGTAGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNLSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQVCAKAHFIIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSVGSFISLVAMLLMVYMIWEAFASKRKVLLIEQPTSNLEWLYGSPPPYHTFDEPTFIKT-K--------MAHPVQLGLQDATSPIMEELIAFHDHAFMIVTLISFLVLYVLSSVLTTKLTNTNITDAQEMETIWTVLPAVILVLIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAIPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGAFSALLMTSGLIMWFHFYSMTLLMLGLLTSMLTMYQWWRDIIRESTYQGHHTTPVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPHLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKQMIQALLTTILLGIYFTLLQISEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTVCLIRQLLYHFTSNHHFGFEAAAWYWHFVDFVWLFLYISIYWWGS--MTATRKANPIMKMINHSLIDLPTPSNISMWWNFGSLLATCLMLQIITGLFLAMHYSPDTSSAFSSIVHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGIVLLLMTMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTNLVQWLWGGYSIDNPTLTRFFTLHFTLPFIIATFTILHLLFLHETGSNNPCGIPSNSDKIPFHPYYTIKDILGMALLLLILMMLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILTIVPMLHKSKQQSMMFRPLSQFLLWTLVTILLTLTWIGSQPVNQPFIMIGQVASMMYFTTILVLMPLASLIENNLL---K---------MF--------TMNLLLITLPILAAMAFLTLTERKLLGYMQLRKGPNVVGPYGLLQPFADAVKLFTKEPLKPSTSTTILYIIAPALAFFIALLLWMPLPMPNSLINLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSILLMSGSFNIYTLITTQEHLWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTMIFLGTLYPIYSPELFTTCFVAKTLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLAFLMWYISVPIATSGI-P-PQN--MNP-LAQLVIYSTMIMGTFITSLSSHWFLAWAGLEMNMLAFTSILIKKANSR-STEAATKYFLVQSTASMILMMAIMYNNLFPGQW--TMMNNPNQLSALIMMMALAMKLGMAPFHFWIPEVTQGTPLIPGLLLLTWQKLAPISIMYQMYSSINTSTLLAL-SMLSIMMGSWGGLNQTQLRKILAYSSITHMGWMMMTLTYNPNVTIFYLLTYIILTTTAFLALSLNSNTTILML---SRTWNKLTWLMPLMSSTLLSMGGLPPLTGFLPKWIIIQELTKNNNFIMPTIMITMTLLNLYFYLRLIYITSMTLLPTSNNTKMKW-QFENTKPMPLI-------PPLIILTTFLLPLSPTILTIF---MN-LMFALTINTLLTLLLMIIMFWLPQLSSYAEKANPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNIPAMAKSSIMLITILTLSLAYEWTQKG--LDWTE-MPIVYMNIMLSFIISLLGMLIYRSHLMSSLLCLEGMMLSLFIMSTLMALNMHFPLANMVPIALLVFAACEAAVGLALLISISNTYGLDHIHNLSLLQCMLKMICPTIMLMPMTWFSKNNMIWINLTTHSLIISLIPI-LFFNQTNNNLISYS-TYFSSDPLSTPLLTLTAWLLPLMIMASQYHLHNESLSRKKLYLSMMILLQISLIMTFMATELILFYILFETTLIPTLIIITRWGNQAERLNASTYFLFYTLAGSLPLLIMLMYTQNSLGSLNIMLLTLTAQKLT-TTW-----SHNLTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMIRLTSILNP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIMASLIQTPWSFTGAIILMIAHGLTSSMLFCLANSNYERTHSRIMMLSRGLQTLLPLMAFWWFMANLTNLALPPTINLIGELLTVMTSFSWSHITIMFTGLNMLITALYSLHMFTTTQRGMLTFHIINMKPSFTRENMLMFMHISSIILLSLNPSIIMGFTP--------MYTSI-VMLTLTSLVFPAIMT---LIKPNKN-YLYPNYVKTT-MMYAFIISLFPTALYILLDQDTIISNWHWTTIQSLELMVSFKLDYFSMMFIPIALFVTWCIMEFSLWYMSSDPNINQFFKYLLIFLITMLILITANNLFQFFIGWEGVGIMSFLLISWWHARTDANTAAIQAILYNRIGDIGFVLAMAWFLLHYNSWDFQQMFILDSN-PNSLPLMGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPMTENNMLIQSLTLCLGAITTIFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLTIGNLALTGMPFLTGFYSKDLIIETANTSYTNAWALSITLIATS-LTSAYSTRTIILTLTGQPRFSTSIYINENNPALLNPMKRLTMGSLLAGFLIINNITPTMFPPLTMPLYLKLLALCVTILGFLMALDLTLMTNKLK--MDTPSHMFKFSNMLGYYPTTIHRMVPYQNLMMSQNLAFLLLDLIWLEKSMPKTISHTHTIASM--ITTTQKGLIKLYFLS---FLIPL--LLIPLLMT----------------- +>Rhinopithecus_avunculus_Tonkin_snub-nosed_monkey +----MNENLFTPFTTPT-LLGLPAVMPIILFPTLLFPTSK-HLISNRLIIIQQNLIQLILKQMMTIHNTKGQTWSLMLMSLIIFIATTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVITGLRFKTKNSLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGSATLALLT-ASLLATSLTLVLLVLLTILEMAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFITIMAML-PALYLIMQLKLLNTNYHF-SPSQKEVSNMRVF-NSP-W-QLKWTKIYLP-LS-QPQRF---MLINRWLFSTNHKDIGTLYLLFGAWAGTMGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNLSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQVCAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSMGSFISLVAMLLMVYMIWEAFASKRKVLLIEQPTSNLEWLHGSPPPYHTFDEPAFIKV-M--------MPHPVQLGLQDATSPIMEELIAFHDHAFMIVSLISFLVLYVLSSVLTTKLTNTNITDAQEMETIWTILPAIILILIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPSLGLKTDAIPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGALSALLMTSGLIMWFHFYSSTLLVLGLVTNMLTMYQWWRDIVRESTYQGHHTMPVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPYLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKQMIQALLITILLGVYFTLLQISEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTVCLIRQLLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTPMRKSNLIMKMINHSLIDLPTPSNISAWWNFGSLLGTCLMMQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWTIRYLHANGASMLFICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNIVQWVWGGYSIDNPTLTRFFTLHFTLPFIIAAFTILHLLFLHETGSNNPCGIPSNPDKIPFHPYYTIKDILGLTLLLLTLMVLVLFLPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLMSILILAIIPMLHKSKQQSMMFRPFSQFLLWLLITILLTLTWIGSQPVNQPFIMIGQMMSVMYFTTILILMPLASLTENNLL---K---------MF--------TVNLLLIILPIIAAMAFLTLTERKLLGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPSTSTITLYIIAPVLAFSIALLLWVPLPMPNPLINLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIIMLSVLLMSGSFNLHALITTQEYIWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTAMIFLGTLYPIHSPELFTVCFVTKTLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLALLMWYISTPIMMSGI-P-PQN--MNP-LAQLVIYSTMIMGTLITSLSSHWFIAWAGLEMNMLAFTSILIKKANPR-STEAATKYFLMQSTASMILMMAITLNNLFPGQW--IMMNNPNQLTSSIMVMALAMKLGMTPFHFWIPEVTQGTPLVPGLLLLTWQKLAPILIMYQIYPSINTNILMTL-STLSIMAGSWGGLNQTQLRKILAYSSITHMGWMMMTLVYNPNITVFYLLTYIIMTSTAFLALNLSSNTTTLML---SRAWNKLTWLMPLVSVTLLSMGGLPPLTGFLPKWITIQELTKNNNFIMPSIMVIMTLLNLYFYLRLIYTTSMTLLPASNNTKMKW-QFENTKPMPLM-------PPFIILTTLLLPMSPTILTMF---MN-LMLALTINTLLTLLLMIIMFWLPLLNPYTEKINPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTSLPMMFKSSIMLIIILTLSLAYEWTQKG--LEWIE-MPIIYMNIMLAFIISLLGMLMYRSHLMSSLLCLEGMMLSLFIMNTLMALNMHFPLANIMPIALLVFAACEAAVGLALLISISNTYGLDHIHNLNLLQCMLKMVFPTMMLMPMTWFSKNNLIWINLTTHSLIISLIPI-LFFHQTNNNLISYS-TYLSSDPLTTPLLTLTAWLLPLMIMASQYHLHNESPLRKKLYLSMMISLQISLIMTFMATELILFYILFETTLIPTLIIITRWGNQAERLNASTYFLFYTLAGSLPLLIMLLYVHNNLGSSNIPLLTLTAQKLT-TTW-----SHNLTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTPILNP-LTEYMAYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIMASLIQTPWSFTGATVLMIAHGLTSSMLFCLANSNYERTHSRIMLLSRGLQTLLPLMAFWWFAANLTNLALPPTINLIGELMVMMTSFSWSHITITLTGLNMLITALYSLYMLITTQRGTLTSHIINLKPSFTRENMLMFMHMSPIILLSLNPSIIVGFTT-------MMHTSI-VMLALTSLIFPIITT---LIKPRKD-YMYPNYVKTI-MMVTFIISLFPMTLYVLLDQDTVISNWHWMTIQSLEIMLSFKLDYFSMMFTPIALFITWCIMEFSMWYMSSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAAIQAILYNRIGDIGFILAMTWFLLHYNSWDFQQMFILDSS-PNLLPLMGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPMMENNMLIQSLTLCLGAITTVFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFICSGSIIHNLDNEQDIRKMGGLSKTMPLTSTSLTIGSLALAGMPFLTGFYSKDLIIETANTSYTNAWALSITLIATS-LTSAYSTRTIILTLTGRPRFSTSTYINENNPALLNPMKRLTAGSLLAGFLIVNNISPTTLPQLTMPYYLKLLALSVTILGFLVAMDLTLMTNNLK--MNTPSYTFKFSNMLGYFPTTIHRMIPCQNLIMSQNLAFILLDSIWLEKSMPKTISHTHIITSI--TTTTQKGMIKLYFLS---FLIPL--TLIPFLMA----------------- +>Canis_latrans_coyote +----MNENLFASFAAPS-MMGLPIVVLIVMFPSILFPAPN-RLINNRLISIQQWLIQLTSKQMLAIHNQKGRTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALIN-ISAATAFITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFIMILSMF-LTLFILFQLKISNHYYPE-NPMTK-SAKITGQ-HNP-W-ENKWTKIYSP-LS-LPPQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAMVELTTTNIEWLHGCPPPYHTFEEPTYVIQ-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLEMVPLSYFETWSALMV----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHYNSMSLLTLGLTTNLLTMYQWWRDVIREGTFQGHHTPIVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLYYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIVNNSFIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYVFMETWNIGIALLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPSGITSNSDKIPFHPYYTIKDILGALLLLLALMTLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILAFVPFLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQVASVLYFTILLILMPMISVIENNLL---KW--------MF--------FINIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSMSMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHMWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHNPFMPELYSINFTMKTLLLTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVALPIITASI-P-PQT--MKP-PILIIIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPR-AMEASTKYFLTQATASMLLMMGVTINLLYSGQW--VISKISNPIASIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPSINTNLLMLM-ALSSVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMILNLTLYILMTLSSFMLFMLNSSTTTLSL---SHMWNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAITALLNLYFYLRLTYSTALTMFPSTNNMKMKW-QFEHTKKVTLL-------PPLIITSTMLLPLTPMLSVLD---MN-VMLTLMTNVTLASLLVLIAFWLPQLNIYTDKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLTTMLIMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYINIFLAFILSLMGMLVYRSHLMSSLLCLEGMMLSLFVMMSVTILNNHLTLASMMPIVLLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTTMLIPLTWMSKPNMIWINTTTYGLLISLISL-FYLNQPNDNTLNTS-LMFFSDSLSAPLLALTTWLLPLMLMASQHHLSKEPLTRKKLYISMLILLQLFLIMTFTASELIFFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALLYIHNLMGSLNFLMIQYWTQPLP-NSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLNP-LTNFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNITIILMGINITITALYSLYMLITTQRGKYSHHIKNIKPSFTRENALMTLHLLPLLLLSLNPKIILGPIY------MNMFTSC-MITALVILTLPIIMA---STKLYKN-KLYPYYVKTA-TSYAFMISMIPTMMFIYSGQETIVSNWHWMTIQTMKLSMSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLLFLITMMVLVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFIMTMAWFLLNLNTWDLQQIFITTNN-NFNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNQTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKVLPFTTTSLIVGSLALTGMPFLTGFYSKDLIIESANTSNTNAWALLITLVATS-LTAAYSTRIMFFALLGQPRFSPMILINENNPLLINSIKRLLIGSVFAGFIISHSITPTTIPQMTMPHYLKVMALAVTILGFILALELNLTMQGLK--FNYPSNYFKFSNLLGYYPAIMHRLTPKTSLTISQKSASMLLDSIWLESILPKSISYFQMKSST--LISNQKGLIKLYFLS---FMLTM--ILSLLIL----------NYHG---- +>Canis_lupus_familiaris_dog +----MNENLFASFAAPS-MMGLPIVVLIVMFPSILFPTPS-RLINNRLISIQQWLIQLTSKQMLAIHNQKGRTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLPLIPMLVVIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALIN-ISATTAFITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFIMIFSMF-LTLFILFQLKISNHYYPE-NPMTK-SAKIAGQ-HNP-W-ENKWTKIYSL-LS-LPPQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAMVELTTTNIEWLHGCPPPYHTFEEPTYVIQ-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLEMVPLSYFETWSALMV----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHYNSMALLTLGFTTNLLTMCQWWRDVIREGTFQGHHTPIVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLYYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIVNNSFIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYVFMETWNIGIVLLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPSGITSDSDKIPFHPYYTIKDILGALLLLLILMSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILAFIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQVASILYFTILLILMPTVSVIENNLL---KW--------MF--------FINIISLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSMSMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHMWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHNPFMPELYSINFTMKTLLLTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVALPIITASI-P-PQT--MKP-PILIIIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPR-AMEASTKYFLTQATASMLLMMGVTINLLYSGQW--VISKISNPIASIMMTTALTMKLGLSPFHFWVPEVTQGITLMSGMILLTWQKIAPMSILYQISPSINTNLLMLM-ALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMVLNLTLYILMTLSTFMLFMLNSSTTTLSL---SHMWNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAITALLNLYFYLRLTYSTALTMFPSTNNMKMKW-QFEYTKKATLL-------PPLIITSTMLLPLTPMLSVLD---MN-VMLTLMTNVTLASLLVLIAFWLPQLNIYTDKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLTTMLIMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYINIFLAFILSLMGMLVYRSHLMSSLLCLEGMMLSLFVMMSVTILNNHLTLASMMPIVLLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTIMLIPLTWMSKPNMIWINTTTYGLLISLISL-FYLNQPNDNTLNSS-LMFFSDSLSAPLLALTTWLLPLMLMASQHHLSKEPLTRKKLYISMLILLQLFLIMTFTASELIFFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALLYIHNFMGSLNFLMIQYWIQPLP-NSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLNP-LTNFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGINIIITALYSLYMLITTQRGKYSHHIKNIKPSFTRENALMTLHLLPLLLLSLNPKIILGPIY------MNMFSSC-MITALVILTLPIIMS---STKLYKN-KLYPYYVKTA-TSYAFMISMIPTMMFIYSGQETIISNWHWMTIQTMKLSMSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLLFLITMMVLVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFIMTMAWFLLNLNTWDLQQIFITTND-NFNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNQTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSVIHSLNDEQDIRKMGGLFKVLPFTTTSLIIGSLALTGMPFLTGFYSKDLIIESANTSNTNAWALLITLVATS-LTAAYSTRIMFFALLGQPRFSPMILINENNPLLINSIKRLLIGSVFAGYIISHSITPTTIPQMTMPHYLKMTALAVTTLGFILALELNLTSQGLK--FNYPSNYFKFSSLLGYYPTIMHRLTPKTSLTISQKSASMLLDSIWLENILPKSISYFQMKSST--LISNQKGLIKLYFLS---FMLTM--ILSLLIL----------NYHG---- +>Canis_lupus_gray_wolf +----MNENLFASFAAPS-MMGLPIVVLIVMFPSILFPTPS-RLINNRLISIQQWLIQLTSKQMLAIHNQKGRTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLPLIPMLVVIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALIN-ISATTAFITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFIMIFSMF-LTLFILFQLKISNHYYPE-NPMTK-SAKIAGQ-HNP-W-ENKWTKIYSL-LS-LPPQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAMVELTTTNIEWLHGCPPPYHTFEEPTYVIQ-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLEMVPLSYFETWSALMV----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHYNSMSLLTLGFTTNLLTMYQWWRDVIREGTFQGHHTPIVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLYYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIVNNSFIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYVFMETWNIGIVLLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPSGITSDSDKIPFHPYYTIKDILGALLLLLILMSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILAFIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQVASILYFTILLILMPTVSVIENNLL---KW--------MF--------FINIISLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSMSMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHMWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHNPFMPELYSINFTMKTLLLTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVALPIITASI-P-PQT--MKP-PILIIIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPR-AMEASTKYFLTQATASMLLMMGVTINLLYSGQW--VISKISNPIASIMMTTALTMKLGLSPFHFWVPEVTQGVTLMSGMILLTWQKIAPMSILYQISPSINTNLLMLM-ALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMILNLTLYILMTLSTFMLFMLNSSTTTLSL---SHMWNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAITALLNLYFYLRLTYSTALTMFPSTNNMKMKW-QFEYTKKATLL-------PPLIITSTMLLPLTPMLSVLD---MN-VMLTLMTNVTLASLLVLIAFWLPQLNIYTDKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLTTMLIMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYINIFLAFILSLMGMLVYRSHLMSSLLCLEGMMLSLFVMMSVTILNNHLTLASMMPIVLLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTIMLIPLTWMSKPNMIWINTTTYGLLISLISL-FYLNQPNDNTLNSS-LMFFSDSLSAPLLALTTWLLPLMLMASQHHLSKEPLTRKKLYISMLILLQLFLIMTFTASELIFFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALLYIHNFMGSLNFLMIQYWIQPLP-NSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLNP-LTNFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGINITITALYSLYMLITTQRGKYSHHIKNIKPSFTRENALMTLHLLPLLLLSLNPKIILGPIY------MNMFSSC-MITALVILTLPIIMS---STKLYKN-KLYPYYVKTA-TSYAFMISMIPTMMFIYSGQETIISNWHWMTIQTMKLSMSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLLFLITMMVLVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFIMTMAWFLLNLNTWDLQQIFITTND-NFNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNQTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKVLPFTTTSLIIGSLALTGMPFLTGFYSKDLIIESANTSNTNAWALLITLVATS-LTAAYSTRIMFFALLGQPRFSPMILINENNPLLINSIKRLLIGSVFAGYIISHSITPTTIPQMTMPHYLKMTALAVTILGFILALELNLTTQGLK--FNYPSNYFKFSSLLGYYPTIMHRLTPKTSLTISQKSASMLLDSIWLENILPKSISYFQMKSST--LISNQKGLIKLYFLS---FMLTM--ILSLLIL----------NYHG---- +>Thryonomys_swinderianus_Greater_cane_rat +----MNENLFSSFMTPS-LIGIPMITMIILFPTILFPTPN-RLINNRLISLQQWLMNLVLKQMMTMHTPKGRTWSLMLMTLIMFIASTNLLGLLPHSFTPTTQLSMNLGMAIPLWFATVVLGFRHKAKKSLAHFLPQGTPIPLIPMLIIIETISLFIQPVALAVRLTANITAGHLLIHLISAATLTLMS-INFPTATILFTILILLTILELAVAVIQAYVFTLLVSLYLHDNTMPQLDTSTWALTIISMI-ITLFYFFQKKMMSYYYYNINSQLK-PMKTPKH-LTP-W-EKKWTKTYSP-LS---------MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLSSSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSSKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNSWAKIHFFVMFMGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMMMIFMIWEAFASKREVLNIEITHTNLEWLHGCPPPYHTFEEPAFVNT-K--------MAYPYEMGFQDATSPIMEELLNFHDHTLMIVFLISSLVLYLISLMLTTKLTHTSTMDAQEIETIWTILPAIILIMIALPSLRILYMMDEINNPLMTVKTMGHQWYWSYEYTDYEELNFDSYMIPTTDLKPGEFRLLEVDNRLVLPMELPIRMLISSEDVLHSWTVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVIEMVPLQTFENWSTTI-----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGMIMWFHFNSNSLLMMGLLGNALTMYQWWRDIIREGTFQGHHTSIVQKGLRYGMILFIISEVLFFSGFFWAFYHSSLAPTPELGGHWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQALLITIILGIYFTILQMSEYYESSFTISDGIYGSTFFVATGFHGLHVIIGTTFLTVCLLRQLYYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MKITRKAHPLLKMINHSFIDLPTPPNISSWWNFGSLLGACLALQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLYLHVARGMYYGSYMFLETWNLGVILLLFVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPTLVEWVWGGFSVDKATLTRFFALHFILPFIITALTMVHLLFLHETGSNNPTGLNSDCDKIPFHPYYSMKDLIGLLLLFFFLLLLVLFFPDILGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILMIIPFIHLSKQRSMSFRPLSQCLFWTLAANLIILTWIGGQPVEHPYITIGQVASILYFTIILILMPLASLIENKIL---KW--------MF--------LINILTLLLPILLAMAFLTLIERKLLGYMQSRKGPNIIGPYGTLQPIADALKLFIKEPIHPSTSSIMLFSIAPLMALSLALSMWIPMPMPQPLVNMNMGLLFILAASSLAVYSILWSGWSSNSKYALFGALRAVAQTISYEVCLAIILLSILMLNGSFTLSTLMITQKNTWLILPTWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIILMNALTVTIFMNSSPLLLNTTSFTTTFILKTLMLVMLFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMSMWHISMPIMLFST-P-PQTI-MNI-MPNIILYSTLIMGTLITITSSHWILMWVGLEMGMFAMIPIMMDKKNPR-STEAATKYFLTQTTASMMLLMSIILTMLYSGNW--EILHNNNLALNIIPLLALAMKMGLAPFHLWVPEVMQGIPLMAGMILLTWQKIAPLIIMIQIAPSLNNMITLSL-AIMSILMGGWGGLNQTQLRKIMAYSSISHMGWMTAIMIYSTSIVLINLTIYIVLTLPMFMMFMYFPNTNTLTL---SLNWNSMPLMTMLTLTVLLSLGGLPPLTGFLPKWMIIQEMINNNSITMPVTMAIMALLNLFFYMRLVYSTTLTLFPSTNNLKFKW-TFQPSTTMPMI-------TPLIIISTLLLPLAPIVTFLN---MN-MMLALSFNYLLTLLLITIAFWMPQTNIYTEKASPYECGFDPTESARLPFSMKFFLIAITFLLFDLEIALLLPLPWALQTNNLPLMTMASLMLVFILALGLMYEWLQNG--LEWNE-MSTILMNMISAYIISFLGTMIYRSHMMSSLLCLEGMMLSMFILSTLTMLNLHYVSFMAIPTILLVFAACEAAIGLALLVMISNTYGTDYVQNLNLLQCMLKIIFPTIMLIPITWLSKPNMIWMNSSSHSLMIALITI-PMITQLDINSHNLS-TMFSSDSLSSPLLILTTWLLPLTIIASQHHLKQEPLYRKKIYITLLISLHTMLIMTFTASEMILFYVLFEATLIPTLIVITRWGNQTERMNAGLYFLFYTLIASLPLLVALLYLQNSTGSLNFLLYKLKALPLL-PTW-----SNDLLWLACIMAFMVKLPMYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRISQLLDP-LTNTMMYPFIMLSLWGMLMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPLSYAGATTLMIAHGLTSSLLFCLANSNYERTHSRTMLLARGLQVILPLMALWWMLSSFSNLALPPTINLLGEMMIIISSFSWSNFTMLFMALNMLVTAMYSLYMLISTQRGTPPYHIHNITPSYTRENMLMTLHLLPLFLTMMNPKIIMGFTI------MNLLSSL-FMMSLLILIIPIIIP---SCILPKS-WNYPSYIKTI-VALSFSLSMIPTLMLIYFEGEGMISNWNWISMQTFNINMSFKLDYFSILFMSVALFVTWSIMEFSLWYMHSDPYINLFFKYLIMFLITMMILVTANNIFQLFIGWEGVGIMSFLLIGWWLSRSEANTAALQAILYNRIGDIGLIISMTWFLLNSNSWEMQQMFMTHNK-IDILPMLGLLLAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLLTLNESIMTLSLCLGAITTLFTALCAITQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICMHAFFKAMLFMCSGSIIHSLNNEQDIRKMGGLYKTMPFTSSAMIIGSLALTGIPFLTGFYSKDLIIESMSTSYLNAWALLLTMIATS-FTAVYSMRIIFYPLLNYPNYNSPMNINENNPQLINPIKRLAIGSIFAGFFISNSIIPMNMPQMTMPLYIKLTAITVTLLGFMLAIELNNMSYNLK--PFHHSKSSMFSTMLGFYPTIMHRLIPLYKLLTSQNLATSSMDMTWLEKTIPKTISNINITLSS--MSTNQLGLIKIYFMS---FLISL--TISIMITT----------------- +>Mirza_coquereli_Coquerels_mouse_lemur +----MNENLFASFIVPT-IVGIPVVILIIMFPNIFFHNPY-RTIGNRLTSLQQWLIKLVLKQMMAMHNIKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWTATVIMGFRHKMKKSLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLISGATMVLTS-ISPVVSSITFIILILLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLVTILSMI-ITLFIMLQLKISKFNFPL-HPSSK-SINKHQL-KSP-W-NMKWTKIYSP-HS-LSQQS---MFVNRWFYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAMSQYQTPLFVWSVVITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMIWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDSWAKIHFAIMFVGVNMTFFPQHFLGLAGMPRRYSDYPDAYTMWNTVSSIGSFISLTAVMLMIFMIWEAFSSKREIMVVDLTPTNLEWLHGCPPPYHTFEEPTYVKA----------MAYPAQLGLQDAASPIMEELAYFHDHTLMIVFLISSMVLYMISLMLTTELTHTSTMDAQEVETVWTILPAVILIFIALPSLRILYMMDEITTPSLTLKTMGHQWYWSYEYTDYESLCFDSYMTPPLELDPGELRLLEVDNRVVLPTEMSIRMLVSSEDVLHSWTVPALGVKTDAIPGRLNQATLMTSRPGIYYGQCSEICGANHSFMPIVLELVPLKHFEEWLLSML----------MTHQTHAYHMVNPSPWPLTGAFSALLMTSGLAMWFHFNSTTLLSLGMLTNLLTMYQWWRDIVREGTFQGHHTLTVQKGLRYGMILFIISEIFFFAGFFWAFYHSSLAPTPELGACWPPTGINPLNPLEVPLLNTAVLLASGVTVTWAHHSLMEGDRMNMLQSLLITIILGIYFTLLQASEYLETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLTICFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKMHPLMKIMNSSFIDLPAPSNISSWWNFGSLLGACLAIQIITGLFLAMHYTADTATAFSSVTHICRDVNQGWIIRYIHANGASMFFMCLFIHVGRGMYYGSFTLSETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMVHLLFLHETGSNNPLGTTSDSDKIPFHPYYTIKDLLGLLFLLLLLMMLVLFSPDLLGDPDNYTPANPLITPPHIKPEWYFLFAYAILRSIPNKLGGVLALIMSILILAILPLLQTTKQRSMVFRPFSQIMFWTLTADLFTLTWIGGQPVEYPFVIIGQIASILYFSLILIIMPTVSLIENNML---KW--------MF--------LINLLLLIVPILLAMAFFTLIERKILGYMQLRKGPNVVGPHGLLQPFADAMKLFIKEPLRPLASSSLLYTIAPTLALSIALIMWIPMPLPYPLINMNMGLLFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMSGSFTLFALITTQEHLWLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTIIFLGALYNPYTPETHTANFTIKTLLLAMMFLWVRASYPRFRYDQLMHLLWKNFLPLTLSLCMWYISLPISMSSI-P-PQM--MKP-LILMTIMMTIFLGTMLTMISSHWLLIWIGLEINMLAMIPILTKNPKPR-STEAATKYFLTQATASMLLMFTIVINAMHLGQW--AMINTNNTLTSLTIIIALTVKLGMTPFHFWVPEVTQGISLMTGMLLLTWQKLAPISIIMQIFPSINLNMLLLI-ALTSIMAGGWGGLNQTQLRKILAYSSIAHMGWMLAIITFCPSLTMLNLLIYLMLTITTFTMLNMDTNTTTLTL---SNLWSKAPMVTTMILVSLLSLGGLPPLTGFLPKWVIIQELTKNNSIIMATVMAIMALLNLYFYMRLIYSTSLTMFPTLNNIKMKW-QFQPTKQALFL-------PPLITLSTLSLPLSPTLSILN---MN-LPMTLMIDVILALTLVIIAFWLPQLNMYTEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNNLKIMVVMALMLITILAMGLIYEWTQKG--LEWEE-MPSISINITLAFTTALLGMLMFRSHMMSSLLCLEGMMLSMFILSTLIILNVQLTMSFMMPILLLVFAACEAAIGLALLVMISNTYGLDYIQNLNLLQCMLKIIIPTIMMFPVTWYSNKTMMWINTTSYGLVISLMTL-PLMNQTEINCNNFS-LTFFSDSLSSPLLMLTVWLLPLMIMASQHHLTKESQARKKLYLSMLVSLQMFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYIQNSLGSLNFLTMTMWFQEMS-NLW-----YNNMLWMACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTMILNP-LTKSMSYPFILLCLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSFMGATALMMAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTFLPLMATWWLLASLTNLALPPFINLIGELFVIMASFSWSNITIILTGLNMLITALYSLYMLTTTQRGKSTYHTHNFYPSYTRENALMSMHMLPLILLTSNPKIIMGPTY------MNLFTSF-MLATLVILILPVLTN---ITNTHKN-KSYAPYVKTS-IACAFITSLIPTALFILSGQEMIISNWHWMLVQTLKLTLSFKLDYFSMLFTPVALFVTWSIMEFSMWYMHADPNINQFFKYLLMFLITMLILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILTMAWFLMYLNTWELQQVFTLYNN-QSMIPLIGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNHTIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKAMPFTSSSLIIGSLALTGMPFLTGFYSKDLIIESANTSNINAWALIITLVATS-LTAIYSTRIIFYVLMGHPRFIPSSTINENNPSLINPIKRLMIGSIFAGFFLSLNILPTNIPQTTMPFHLKMTALTVTILGFMLAMELNIMTNNLK--LKPPLNMFKFSNLLGFFPTIMHRPIPMLNLHTSQNTASSMLDLAWFEKTMPKNMSKMQTTFSS--TISNQKGLIKLYFMS---FLASA--LMVMMLIT----------------- +>Rhizomys_pruinosus_hoary_bamboo_rat +----MNENLFSSFTTPT-LMGLPIVIFIIFFPSIFLTKSN-RFMNNRFLSSQSWLLQVITKQMMLIHTPKGRSWTLMLMSLIIFIASSNLLGLLPYTFTTTTQLSMNLGLAIPLWAGAVILGFRHKTKMSLAHFLPTGTPIMLIPMLIIIETISLLIQPMALAVRLTANITAGHLLMHLIGSATMALTS-INTPIALITFIILILLTILELAVALIQAYVFTLLVSLYLHENSMPQLDTSTWAITIMFSL-ITLFSIFQPKLSNFNFLP-LPYFK-PKNLI-YSSYP-W-TLKWTKIYSP-LS-LPQHS---MFITRWLFSTNHKDIGTLYLMFGAWAGMVGTALSILIRTELGQPGALLGDDQIYNVVVTAHAFIMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFIHWFPLFSGYTLNDTWAKIHFAVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNVISSMGSFISLTAVLIMVFMIWEAFASKREVQSVDATSTNLEWLHGCPPPYHTFEEPTFVKV-N--------MAYPLQYGLQDATSPIMEELMHFHDHTLMIVFLISFLVLYVIFAMLSTKLTHTSTMNAQEVETIWTVLPAVILILIALPSLRILYMMDEIYNPTLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTNELKSGELRLLEVDNRVVLPMDLPIRMLISSEDVLHSWAIPSLGLKTDAIPGRLNQATLSSTRPGLFYGQCSEICGSNHSFMPIVLEVVPLKQFENWSATMI----------MTHQTHAYHMVNPSPWPLTGALSAFLMTSGLTMWFHFNSIFLLLTGLFANILTMYQWWRDIIREGTFQGHHTPVVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTHELGGYWPPAGITPLNPFEVPLLNTAVLLASGVTITWAHHSLMEGHRSNMNYALLLTILLGLYFTILQASEYYETPFTISDGIYGSTFFMATGFHGLHVIIGTTFLLTCLFRQLNFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKSHPLMKIINHAFIDLPTPSNISVWWNFGSLLGICLIMQIITGLFLAMHYSSDTTTAFSSVAHICRDVNYGWLIRYIHANGASMFFICLYLHIGRGIYYGSYTFLETWNIGILLVFSIMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGPTLVEWIWGGFSVDKATLSRFFAFHFILPFIITALVMVHLLFLHETGSNNPTGLNSNADKIPFHPYYTTKDILGFIIMGLILISLTLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILILLPLLHTSPLRSLTFRPMSQCLFWILVADLITLTWIGGQPVETPFILIGQIASILYFSIILILLPLTGMLESKAM---KL--------MY--------FLNVILVIFPILLAMAFLTLTERKILGYMQLRKGPNIVGPYGILQPFADAMKLFTKEPLRPSASSISLFIFAPTLAITLALSLWIPLPTPHPLTNLNLGALFILALSSLAVYSILWSGWASNSKYSLIGAIRAVAQTISYEVTLAIIILSVLTMNGSFSLTMLSYSQEQTWFILPFWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTTIIFLGPSFYPQNPELFTLEFITKTLILTSLFLWIRAAYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPFVMANI-P-PYI-MLPVLMIYTIILITIFLGPIITITSTHLLIMWTGLEMSTLAMIPILLKTFNPR-AIEAAAKYFLTQSTASMILLLAITLNYHNLGIW--QLTPNTQQYIYYLILIALMIKLGLAPFHFWVPEVTQAIPILNGLLLLTWQKIAPLIILYNISYMTNPAIIPIS-ATLSILLGGWGGLNQTQMRKILAYSSIAHMGWMVAISMFNPMMMILNLLIYILLTTSMFFTMHILSTTSIIML---SKTWNKLPLLTSTSLVILLSLGGLPPLTGFLPKWMIIVELTKNNSIFMALSMALMALLNLFFYMRLIYASSMTVLPSNNNSKFYT-HQNKQKYLFLM-------APLIIVSSTALPISPLLINLY---MN-FLVALFTNLLLALILVTLAFWLPQLNIYTEKITPYECGFDPLGSARLPFSMKFFLIAITFLLFDLEIALLLPIPWALQFNNLSSTIMVALFLITIVSLGFLYEWLYKG--LEWAD-MTLVFLNLMLAFFLSLLGTLTFRSHMMSTLLCMEGMMLSLFLMISLASLNSQFTLSLIIPTTILVFAACEAAIGLALLVSISNTYGTDYVQNLNLLQCMLKIILPSFMLLPLTWFSKNNFIWVNTTSYSFLITLISL-HTINLNDNFSQNFS-LIMFTDSLSSPLLILTCWLLPLTLLASQNHLMNQPLNYKKTYISMLILLQNLLVLTFSTTDMMLFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALIYTYNLLGTLNFILLNLQQTQIN-NMW-----SNHLLWLMFMLAFLVKMPLYGIHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRISILLDP-INKNMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIIAVMIQTPWSYMGATALMIAHGLTSSLLFCLANTNYERIHSRTLILAQGLQTMLPLLGIWWMLGSLANLALPPTINLIGELLIISSSFSWSNFTIIFMGTNVLITALYSFYMIISSQRGKSTTHTKFMPPTLTRENMIVSLHIFPIILISINPKLILGLPY------MHNIQSI-NFLTLFILMIPLVIS---IIQPNNT-MNFSKYIIYS-IKTSFFLSLIPLLLYLSNNTEFIISNWHWMTINSMKLSLSFKSDYFSILFIPVALMVTWSITEFSLWYMHSDPNLNRFLKYLLMFLLTMIILVTANNLIQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLIISLAWFCINLNSWDLQQIFLNFNFYPHLLPLYGLLLAAMGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFFPIMTNNQTILSLMLCIGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPNLAFLHICTHAFFKAMLFLCSGSIIHSLNNEQDIRKMGGLAKSMPFTTSCLIIGTLALTGIPFLTGFYSKDLIIESMNTSNTNAWALLITLIATS-LTAAYSTRIIFLVLMSKPRFPPISPINENNPKLINPILRLALGSLIAGFLFSISTPPMNLPIMTMPLYIKLTALIITLLGFSIAMELYNFSFFLP--PKQPTPAHNFMSLLGYFPLIFHRLLPLMNFKMSQNIATNTLDMIWLEKSIPKAISSINIYAST--ITSNQKGLIKLYFLS---FLISM--LIPLLFLI----------------- +>Pan_troglodytes_chimpanzee +----MNENLFASFAAPT-ILGLPAAVLIILFPPLLVPTSK-HLINNRLITTQQWLIQLTSKQMMTMHSTKGRTWSLMLVSLIIFITTTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGAVVMGFRFKTKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTANITAGHLLMHLIGSATLALST-INLPYALIIFTILILLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTAVWPTMITPML-LTLFLVTQLKMLNSNYHL-PPSPK-PMKMKNY-NKP-W-EPKWTKIYSL-HS-LPPQS---MFTDRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIQFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVLSSVGSFISLTAVMLMIFMIWEAFASKRKVLMVEEPSANLEWLYGCPPPYHTFEEPVYMKS----------MAHAAQVGLQDATSPIMEELIIFHDHALMIIFLICFLVLYALFLTLTTKLTNTSISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPVEAPVRMMITSQDVLHSWAVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPVFTL----------MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFYSTTLLTLGLLTNTLTMYQWWRDVMREGTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICLIRQLMFHFTSKHHFGFQAAAWYWHFVDVVWLFLYVSIYWWGS--MTPTRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQITTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYYGSFLYLETWNIGIILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWVWGGYSVDSPTLTRFFTFHFILPFIITALTTLHLLFLHETGSNNPLGITSHSDKITFHPYYTIKDILGLFLFLLILMTLTLFSPGLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTILRSIPNKLGGVLALLLSILILTAIPVLHTSKQQSMMFRPLSQLLYWLLATDLLILTWIGGQPVSYPFITIGQMASVLYFTTILILMPIASLIENKML---EWT-------TP--------MTNLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLSTLVTTQEHLWLILPTWPLAMMWFISTLAETNRTPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNTLTATIFLGATYNTHSPELYTTYFVTKALLLTSLFLWIRTAYPRFRYDQLMHLLWKNFLPLTLASLMWYISMPTTISSI-P-PQT--MNP-LAQPIIYSTILTGTLITALSSHWFFTWVGLEMNMLAFIPILTKKMSPR-STEAAIKYFLTQATASMILLMAILSNSMLSGQW--TMTNTTNQYSSLMIMMAMAMKLGMAPFHFWVPEVTQGTPLMSGLLLLTWQKLAPISIMYQISSSLNVNLLLTL-SILSIMAGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLNSSTTTLLL---SRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWVIIEEFTKNNSLIIPTIMAIITLLNLYFYLRLIYSTSITLLPMSNNVKMKW-QFEHTKPTPFL-------PTLITLTTLLLPISPFMLMIL---MN-FVLILMTNTLLALLLMIITFWLPQLNSYMEKSTPYECGFDPMSPARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTANLPLMVTSSLLLITILALSLAYEWLQKG--LDWTE-MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMATLMTLNTHSLLANIVPITMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQCMLKLIIPTIMLLPLTWFSKKRMIWINTTTHSLIISTIPL-LFFNQINNNLFSCS-LPFSSDPLTTPLLMLTAWLLPLTIMASQRHLSNEPLSRKKLYLSMLISLQISLIMTFSATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLTLTTQELS-NTW-----ANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNP-LTKHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYPSVSHMALVVTAILIQTPWSFTGAIILMIAHGLTSSLLSCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTSFSWSNTTLLLTGFNMLITALYSLYMFTTTQWGSLTHHINSMKPSFTRENTLMFLHLSPILLLSLNPDIITGFTS------MTMYATM-TTLALTSLIPPILGA---LINPNKK-NSYPHYVKSI-IASTFIISLFPTTMFMCLDQETIISNWHWATTQTTQLSLSFKLDYFSMTFIPVALFVTWSIMEFSLWYMDSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARTDANTAAIQAILYNRIGDIGFVLALAWFLLHSNSWDPQQMILLSTN-TDLTPLLGFLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLAENNPLIQTLTLCLGAITTLFAAVCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDLIIETANMSYTNAWALSITLIATS-LTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLTIGSLFAGFLITNNILPMSTPQVTIPLYLKLTALGVTSLGLLTALDLNYLTSKLK--MKSPLYTFHFSNMLGFYPNIMHRSIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQYQISASI--TTSTQKGMIKLYFLS---FFFPL--ILTLLLIT----------------- +>Gorilla_gorilla_gorilla_western_lowland_gorilla +----MNENLFASFIAPT-ILGLPAAVLIILLPPLLIPTSK-YLINNRLIATQQWLIQLTSKQMMTMHNAKGRTWSLMLMSLIIFIATTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGAVTTGFRSKTKNALAHLLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGSATLAMST-TNLPSTLIIFTVLILLTMLEIAVALIQAYVFTLLVSLYLHENTMPQLNTTVWPTMIAPML-LTLFLITQLKVLNTNYHL-PPLPK-TMKMKNF-CKP-W-ESKWTKIYSL-HS-LPPQS---MFTDRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNTKWSAAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGSFISLTAVMLMIFMIWEAFASKRKVLMIEEPSTNLEWLYGCPPPYHTFEEPVYMK-----------MAHAAQVGLQDATSPIMEELIIFHDHALMIIFLICFLVLYALFLTLTTKLTNTNISDAQEMETIWTILPAIILVLIALPSLRILYMTDEINDPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPVEAPVRMMITSQDVLHSWAVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPVFAL----------MIHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSTTLLMLGLLTNMLTMYQWWRDVMRESTYQGHHTLPVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPQLGAHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLITILLGLYFTLLQASEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICLIRQLMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTPMRKTNPLAKLINHSFIDLPTPSNISTWWNFGSLLGACLILQITTGLFLAMHYSPDASTAFSSIAHITRDVNYGWTIRYLHANGASMFFICLFLHIGRGLYYGSFLHQETWNIGIILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWVWGGYSVDSPTLTRFFTFHFILPFIITALTTLHLLFLHETGSNNPLGIPSHSDKITFHPYYTIKDILGLFFFLLTLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILTMIPILHMSKQQSMMFRPLSQLLYWFLIANLFTLTWIGGQPVSYPFITIGQVASVLYFTTILFLMPITSLIENKML---KWT-------MS--------MANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPSTSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMNGSFNLSTLIMTQEHLWLLLPTWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNTLTTMIFLGTTYNAHSPELYTVCFITKTLLLTSLFLWIRTAYPRFRYDQLMHLLWKNFLPLTLALLMWYISMPTTISSI-P-PQT--MNP-LAQPIIYSTIFAGTLITALSSHWFFAWVGLEMNMLAFIPVLTKKMNPR-STEAAIKYFLTQATASMILLMAILSNNMLSGQW--TTTNATNQYSSLMIVVAMAMKLGMAPFHFWVPEVTQGTPLMSGLLLLTWQKLAPMSIMYQISSSTNVSLLLTL-SILSILAGSWGGLNQTQLRKILAYSSITHVGWMMAVLPYNPNMTILNLTIYIILTTTTFLLLNLNSSTTTLLL---SRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWLIIEEFTKNNDLITPTIMAIITLLNLYFYLRLIYSTSITLLPMSNNVKMKW-QLEYTKPTPFL-------PTLITLTTLLLPISPFMLMVL---MN-FALILMTNTLLALLLMIITFWLPQLNSYMEKTNPYECGFDPVSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILTLSLAYEWLQKG--LDWAE-MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMATLMTLNTHSLLANIVPITMLVFAACEAAVGLALLVSISNTYGLDYVQNLNLLQCMLKLIAPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPL-LFFNQINNNLFSYS-LSFSSDPLTTPLLMLTTWLLPLTIMASQRHLSNEPLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFEATLIPTLVIITRWGNQPERLNVGTYFLFYTLVGSLPLLIALIHTHNTLGSLNILLLTLTAQELP-NSW-----ANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMMLAAVLLKLGGYGMMRLMLILNP-LTKHMAYPFLALSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVVAAILIQTPWSFTGAVVLMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMALWWLLASLANLALPPTINLLGELSVLVTTFSWSNTTLLLTGSNMLITALYSLYMFTTTQWGPLTHHITNMKPSFTRENILMFMHLSPILLLSLNPDIITGFTS------MTMYATM-TTLALTSLIPPILTT---FINPNKK-SSYPHYVKSI-VASTFIISLFPTTMFLCLDQEAIISSWHWATTQTIQLSLSFKLDYFSMMFIPVALFVTWSIMEFSLWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYARTDANTAAVQAILYNRIGDIGFILALAWFLLHSNSWDPQQMSLLNTN-PNLIPLLGFLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHHLAENNSLAQTLTLCLGAITTLFAAVCALTQNDIKKIVAFSTSSQLG--LMVATIGIGQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKAMPLTSTSLAIGSLALMGMPFLTGFYSKDLIIETANMSHTNAWALSIILIATS-LTSAYSTRMILLTLTGQPRFPTFANINENYSTLLNPIKRLTIGSLFAGFFITNNILPTSVPQMTIPLYLKLTALSITLLGLLTALDLNYLTNKLK--MKHPPHTFYFSNMLGFYPNITHRTIPYLGLLMSQNLPLLLLDLIWLEKLLPKTISQHQISASI--TTSTQKGLIKLYFLS---FFFPL--LMILLLIT----------------- +>Naemorhedus_griseus_Chinese_goral +----MNENLFTSFVTPV-MLGLPLVTFIVLFPSLLFPTSN-RLISNRLISLQQWMLQLVSKQMMSIHNIKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHLLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATFALMN-INITAASITFIVLVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LTLFIIFQLKISKHNFHY-NPELT-TTKTPKQ-NSP-W-ETTWTKIYLP-LS-LPL-----MFTNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWTKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIIALMLTTKLTHVSTMDAQEVETIWTIMPAIILITIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAVPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMTLLTLGLTTNMLTMYQWWRDIIRESTYQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHTLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTNIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAMVHLLFLHETGSNNPTGIPSDSDKIPFHPYYTIKDVLGAMLLILILMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALVPFLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVDHPYIIIGQLASIMYFLIILVLLPVASTVENNLL---KW--------ML--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSTSMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQMWLIFPTWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYVPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILTTIMLGTIIVMTSSHWLLTWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLMMMAIIINLMFSGQW--TVMKLFNPTASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIMYIIMTSTMFTLFMANSTTTTLSL---SRTWNKTPIMTVLILITLLSMGGLPPLSGFMPKWMIIQEMTKNKSIILPTLMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFSTTKRMTLL-------PTMTVLSTMLLPLTPILSILE---MN-LMITLLTNFTLATLLVTIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLSTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFATSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNTVWINPTLHSLLISLTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESLARKKLFISMLILLQLLLIMTFTATELIFFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNVIGSLNFLILQYWAQPMP-SSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITLLLNP-TTDFMSYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVMMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKHTHHINNILPSFTRENALMALHMLPLLLLSLNPKVILGPLY------MNLFSSF-TLMTLVLLTTPIMAI---NLNTCKY-SNYPLYVKTT-ISYAFIISMIPTMMFIHTGQETVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLKPD-NSNLPLMGLTLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNEFAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLLKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFTLLGQPRFPTLITINENNPLLINSIKRLLIGSLFAGFIISNSIPPTTIPQMTMPYYLKMTALAITTLGFILALETSNMTHNLK--FNYPSNIFKFSNLLGYYPTIMHRLVPYTNLTMSQKLASSLLDLTWLENILPKTISTTQVKMAT--MVTNQKGLVKLYFLS---FLITI--LISMILF----------NFHE---- +>Pan_paniscus_pygmy_chimpanzee +----MNENLFASFAAPT-ILGLPAAVLIILFPPLLVPTSK-HLINNRLITTQQWLIQLTSKQMMTMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVVMGFRFKTKNALAHFLPQGTPTPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGSATLALST-ISLPSTLIIFTILILLTVLEIAVALIQAYVFTLLVSLYLHDNTMPQLNTAVWPTTITPML-LTLFLITQLKMLNSNYHL-PPSPK-PMKMKNY-NKP-W-EPKWTKICSL-HS-LPPQS---MFTDRWLFSTNHKDIGTLYLLFGTWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIQFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVLSSVGSFISLTAVMLMIFMIWEAFASKRKVLMVEEPSANLEWLYGCPPPYHTFEEPVYMKS----------MAHAAQVGLQDATSPIMEELIIFHDHALMIIFLICFLVLYALFLTLTTKLTNTSISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPVEAPVRMMITSQDVLHSWAVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPVFTL----------MAHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFYSTTLLTLGLLTNTLTMYQWWRDVMRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICLIRQLMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTPTRKINPLMKLINHSFIDLPTPSNISTWWNFGSLLGACLILQITTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMLFICLFLHVGRGLYYGSFLYLETWNIGIILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWVWGGYSVDSPTLTRFFTLHFILPFIITALTTLHLLFLHETGSNNPLGITSHSDKITFHPYYTTKDILGLFLFLLALMVLTLFSPDLLGDPDNYTLANPLITPPHIKPEWYFLFAYTILRSVPNKLGGVLALLLSILILAVIPILHTSKQQSMMFRPLSQLLYWLLATDLLILTWIGGQPVSYPFITIGQVASVLYFTTILILMPIISLIENKML---EWA-------TP--------MTNLLLLIVPVLIAMAFLMLTERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLSTLITTQEHLWLILPTWPLAMMWFISTLAETNRTPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNTLTATIFLGTTYNTHSPELYTTYFVTKALLLTSLFLWIRTTYPRLCYDQLMHLLWKNFLPLTLASLMWYISMPTTISSI-P-PQT--MNP-LAQPIIYSTIFAGTFITVLSSHWFFTWVGLEMNMLAFIPVLTKKMSPR-STEAAIKYFLTQATASMILLMAILSNNMLSGQW--TMTNTTNQYSSLMIMTAMAMKLGMAPFHFWVPEVTQGTPLMSGLLLLTWQKLAPISIMYQMSSSLNVNLLLTL-SILSIMAGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTTFLLLNLNSSTTTLLL---SRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWVIIEEFTKNNSLIIPTTMAIITLLNLYFYLRLIYSTSITLLPMSNNVKMKW-QFEHTKPTPFL-------PTLITLTTLLLPISPFMLMIL---MN-FVLILMTNTLLALLLMIITFWLPQLNSYMEKSNPYECGFDPMSPARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTANLPLMVMSSLLLITILALSLAYEWLQKG--LDWAE-MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMTTLMTLNTHSLLANIVPITMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQCMLKLIIPTIMLLPLTWFSKKRMIWINTTTHSLIISTIPL-LFFNQINNNLFSCS-LSFSSDPLTTPLLMLTAWLLPLTIMASQRHLSNEPPSRKKLYLSMLISLQISLIMTFSATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLTLTAQELS-NTW-----ANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNP-LTKHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTSFSWSNTTLLLTGFNMLITALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFTS------MTMYTTM-TTLTLTPLILPILTT---LINPNKK-NSYPHYVKSI-IASTFIISLFPTTMFMCLDQEAIISNWHWATTQTTQLSLSFKLDYFSMTFIPVALFVTWAIMEFSLWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARTDANTAAIQAILYNRIGDIGFILALAWFLLHSNSWDPQQMVLLSTN-PSLTPLLGFLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLAENNPLIQTLTLCLGAITTLFAAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLIIGSLALAGMPFLTGFYSKDLIIETANMSYMNAWALSITLIATS-LTSAYSTRMILLTLMGQPRFPTLTNINENNPTLLNPIKRLTIGSLFAGFFITNNILPMSTSQMTIPLYLKLTALSVTFLGLLTALDLNYLTNKLK--MKSPPYTFYFSNMLGFYPNIMHRSIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQYQVSASI--TTSTQKGMIKLYFLS---FLFPL--ILTLLLIM----------------- +>Muntiacus_muntjak_muntjak +----MNENLFASFITPM-ILGLPLATLVVMFPSLLFPTSN-RLVNNRLISLQQWALQLVSKQMMGIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLIIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLIMIMSMF-LVLFIIFQLKISKHNFYF-NPETL-PTKAQKQ-NTP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSDHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSIILLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGVLLLILFLMSLVLFVPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALISSILILILMPLLHTSKQRSMIFRPLSQCLFWILVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPIISTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASILNYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPILPELYTINFTIKSLLLTIFFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILSTLMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFSLFMANSATTTLSL---SHTWNKMPVMSTLILVTLLSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTLMAITALLNLYFYMRLTYSTALTMFPSVNNMKMKW-QYSTTKQMILL-------PTMVILSTMLLPLTPILSVLE---MN-LMLALLTNFALASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLSTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVSLAGLLMYRSHLMSSLLCLEGMMLSLFVLATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWLSKGSMIWINSTTHSLLISLTSL-LLMNQFSDNSLNFS-LMFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESLTRKKLYITMLILLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNITGSLNFLVLQYWMQPLS-SSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSGYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLIMTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGTLY------MNLFSSF-TLTTLLLLIIPILTT---SSENYKT-SNYPFYVKTT-ISCAFLISMVPTMMFIHTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLNPN-DSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKMSLFPHPANSA--YMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSTDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLVTINENNPFLMNSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPHHLKMMALAVTILGFILALEISNMTQNLK--LNHPTNTFKFSNMLGYFPTIMHRLAPYMNLTMSQKSASSLLDLIWLENILPKTTSLAQAKLSI--MVTSQKGLIKLYFLS---FLVTI--TISVILF----------NFHE---- +>Symphalangus_syndactylus_siamang +----MNENLFASFAAPT-ILGLPAAVPIILFPSLLIPTSK-YLINNRLITTQQWLIQLTLKQMMTLHNTKGRTWSLMLISLIIFIATTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVATGLRLKTKNTLAHLLPQGTPTPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGAATLALST-ISLPMTPIIFTILALLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTTVWPMIITSML-LTLFLLMQLKTLNMHYHP-PASPK-LMNIKPH-NNP-W-EHKWTKIYSL-HS-LPLQS---MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSDTKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDQTYAKIHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGSFISLTAVMLMIFMIWEAFASKRKILMIEQPSTNLEWLYGCPPPYHTFEEPVYMKP----------MAHAAQVGLQDATSPIMEELISFHDHALMIIFLISFLVLYALFLTLTTKLTNTNITDAQEMETVWTILPAIILVLIALPSLRILYLTDEINDPSFTIKAIGHQWYWAYEYTDYGGLIFNSYMLPPLFLEPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTVPSLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPVFTL----------MTHQSHAYHMVKPSPWPLTGALSALLLTSGLAMWFHFHTTTLLTLSMLTNALTMFQWWRDVVREGTYQGHHTMPVQKGLRYGMILFITSEIFFFAGFFWAFYHSSLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLITILLGTYFTLLQISEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIICLIRQLLFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTPLRKTNPLMKLINHSLIDLPTPSNISTWWNFGSLLGACLVLQIITGLFLAMHYTPDASAAFSSVAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYYGSFLYLETWNIGIILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSVDNATLTRFFTFHFILPFIITALVTLHLLFLHETGSNNPLGIPSQPDKVTFHPYYTTKDILGMLLLLLILMSLVLFSPDLLGDPDNYIQANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLMSILILVAIPALHTAKQQSMMFRPLSQLTYWFLVMNLLTLTWIGGQPVSYPFTTIGQVASLLYFTTILILMPTASLIENKML---KWT-------MP--------TTNLLLLILPTLIAMAFLMLTERKILGYTQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTATLYIIAPTLALTIALLLWTPLPMPSPLINLNLGLLFILATSSLTVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFNLSTLITTQEHIWLILPTWPLAMMWFVSTLAETNRTPFDLTEGESELVSGFNTEYAAGPFALFFMAEYVNIIMMNALTTTIFLGTTHNARFPELYTTCFTIKTLLLTSLFLWIRTTYPRFRYDQLMYLLWKNFLPLTLALLMWYISLPIMIAST-P-PQT--MNP-LAQPIIYSTIFAGTLITASSSHWFLAWVGLEMNMLAFIPVLTKKMNPR-STEAAIKYFLVQATASMILMMAILSNNLLSGQW--TTTNITNQYSSLMILTALAMKLGMAPFHFWVPEVTQGTTLTSGLLLLTWQKLAPISIMYQIFPVMNVNILLTF-SILSIMVGSWGGLNQTQLRKILAYSSITHVGWMTAVLPYNPNITIFNLTIYIVLTTTAFLALNLNSSTTTLLL---SRSWNKLTWLLPLIPSTLLSLGGLPPLTGFLPKWLVIEELTKNGTLIIPTIMAIVTLINLYFYMRLIYSTSITLFPTSNNVKMKW-QFENMKPTLLL-------PTLTILTTLLLPIAPLTFPAP---MS-LVLALTINTLLALLLMIITFWLPQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTSPSLTITSSLTLITILVLSLAYEWSQKG--LDWVE-MPLIYMNIMLAFTISLLGMLIYRSHLMSSLLCLEGMMLSLFIMATLMALNTHSLLINIMPIVLLVFAACEAAVGLALLVSISNTYGLDHIHNLNLLQCMLKLIIPTIMLLPLTWLSKKHMIWINTTTHSLIISPIPL-LFFNQTNNNLLTYS-LSFSSDPLTTPLLMLTTWLLPLMIMASQHHLYNEPLLRKKLYLSMLIILQISLIMTFTATELMMFYILFETTLIPTLIIITRWGNQPERLNAGSYFLFYTLVGSLPLLIALIHTHNTLGSLNIMLLNLSSQNLT-DSW-----SNNLMWLAYMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILSP-LTKHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSFTGAIVLMIAHGLTSSLLFCLANSNYERTHSRIMILSRGLQTLFPLMAFWWLMANLANLALPPTINLLGELFVLMASFSWANTTIMLTGLNMLITALYSLYMFIMTQRGMLTHHIKNMKPSLTRENMLMLMHLFPLLLLSINPNIITGFTP--------MYTTM-TVLTLTSLILPIITT---FIKPNKK-SLYPHYVKTT-IASTFMISLFPTTLFMCTDQETIISNWHWTATQTLELSLSFKLDYFSMMFTPIALFVTWSIMEFSLWYMHSDPNINQFFKYLLIFLTTMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYAREDANTAAIQAILYNRIGDIGFILALAWFLFHTNSWEPQQMLLLNTN-SNLLPLAGLLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLTESNQSIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTLPLTSTSLTIGSLALTGMPFLTGFYSKDLIIETANMSYTNAWALSMTLIATS-LTSAYSTRLILLTLTNQPRFPTLTNINENNPTLLNPIKRLTIGSLLAGFLIINSIPPTSPSQTTIPLYLKLTALSITFLGFLTAFDLYLLTNKLK--MKNTSHMFHFSNMLGFYPSTIHRTIPHASLLMSQNLASLLLDLAWLEKSMPKAISHHQISASI--TISSQKGMIKLYSLS---LLIPL--FLALLLIM----------------- +>Gorilla_gorilla_western_gorilla +----MNENLFASFIAPT-ILGLPAAVLIILLPPLLIPTSK-YLINNRLIATQQWLIQLTSKQMMTMHNAKGRTWSLMLMWLIIFIATTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGAVTTGFRSKTKNALAHLLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGSATLAMST-TNLPSTLIIFTVLILLTMLEIAVALIQAYVFTLLVSLYLHENTMPQLNTTVWPTMIAPML-LTLFLITQLKVLNTNYHL-PPLPK-TMKMKNF-CKP-W-EPKWTKIYSL-HS-LPPQS---MFTDRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNTKWSAAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRHYSDYPDAYTTWNILSSVGSFISLTAVMLMIFMIWEAFASKRKVLMIEEPSTNLEWLYGCPPPYHTFEESVYMKS----------MAHAAQVGLQDATSPIMEELIIFHDHALMIIFLICFLVLYALFLTLTTKLTNNNISDAQEMETIWTILPAIILVLIALPSLRILYMTDEINDPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPVEAPVRMMITSQDVLHSWAVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPVFAL----------MIHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSTTLLMLGLLTNMLTMYQWWRDVMRESTYQGHHTLPVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPQLGAHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLITILLGLYFTLLQASEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICLIRQLMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTPMRKTNPLAKLINHSFIDLPTPSNISTWWNFGSLLGACLILQITTGLFLAMHYSPDASTAFSSIAHITRDVNYGWTIRYLHANGASMFFICLFLHIGRGLYYGSFLHQETWNIGIILLLTTMAAAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWVWGGYSVDSPTLTRFFTFHFILPFIITALTTLHLLFLHETGSNNPLGIPSHSDKITFHPYYTIKDILGLFLFLLTLMTLTLFSPDLLGDPDNYTLANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQLLYWFLIADLFTLTWIGGQPVSYPFITIGQVASVLYFTTILFLMPITSLIENKML---KWT-------MS--------MANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPSTSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMNGSFNLSTLIMTQEHLWLLLPTWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPLALFFMAEYMNIIMMNTLTTMIFLGTTYNAHSPELYTVCFITKTLLLTSLFLWIRTAYPRFRYDQLMHLLWKNFLPLTLALLMWYISMPTTISSI-P-PQT--MNP-LAQPIIYSTIFAGTLITALSSHWFFAWVGLEMNMLAFIPVLTKKMNPR-STEAAIKYFLTQATASMILLMAILSNNMLSGQW--TTTNATNQYSSLMIVVAMAMKLGMAPFHFWVPEVTQGTPLMSGLLLLTWQKLAPMSIMYQISSSTNVSLLLTL-SILSILAGSWGGLNQTQLRKILAYSSITHVGWMMAVLPYNPNMTILNLTIYIILTTTTFLLLNLSSSTTTLLL---SRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWLIIEEFTKNNDLITPTIMAIITLLNLYFYLRLIYSTSITLLPMSNNVKMKW-QLEYTKPTPFL-------PTLITLTTLLLPISPFMLMVL---MN-FALILMTNTLLALLLMIITFWLPQLNSYMEKTNPYECGFDPVSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILTLSLAYEWLQKG--LDWTE-MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMATLMTLNTHFLLANIVPITMLVFAACEAAVGLALLVSISNTYGLDYVQNLNLLQCMLKLIAPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPL-LFFNQINNNLFSYS-LSFSSDPLTTPLLMLTTWLLPLTIMASQRHLSNEPLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFEATLIPTLVIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIHTHNTLGSLNILLLTLTAQELP-NSW-----ANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMMLAAVLLKLGGYGMMRLMLILNP-LTKHMAYPFLALSLWGMIMTS--SISLRQTDLKSLIAYSSISHMALVVAAILIQTPWSFTGAVVLMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMALWWLLASLANLALPPTINLLGELSVLVTTFSWSNTTLLLTGSNMLITALYSLYMFTTTQWGPLTHHITNMKPSFTRENILMFMHLSPILLLSLNPDIITGFTS------MTMYATM-TTLALTSLIPPILTT---FINPNKK-SSYPHYVKSI-VASTFIISLFPTTMFLCLDQEAIISSWHWATTQTIQLSLSFKLDYFSMMFIPVALFVTWSIMEFSLWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYARTDANTAAVQAILYNRIGDIGFILALAWFLLHSNSWDPQQMSLLNTN-PNLIPLLGFLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFRHLAENNSLAQTLTLCLGAITTLFAAVCALTQNDIKKIVAFSTSSQLG--LMVATIGIGQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKAMPLTSTSLAIGSLALMGMPFLTGFYSKDLIIETANMSHTNAWALSIILIATS-LTSAYSTRMILLTLTGQPRFPTFANINENYSTLLNPIKRLTIGSLFAGFFITNNILPTSVPQMTIPLYLKLTALSITLLGLLTALDLNYLTNKLK--MKHPPHTFYFSNMLGFYPNITHRTIPYLGLLMSQNLPLLLLDLIWLEKLLPKTISQHQISASI--TTSTQKGLIKLYFLS---FFFPL--LLILLLIT----------------- +>Orycteropus_afer_aardvark +----MNENLFASFATPT-LMGLPVVLLIIMFPMLLYPPSN-RLITNRLSAIQQWLVKLILKQLMSIHNTKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVIMGFRHKTKSSLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAIRLTANITAGHLLMHLIGGATLALMS-ISTTTAFITFIILLLLTMLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTTPWFITILSMI-ITLFILFQSNMSKYLYPL-EPQPK-TLKTQLY-NAP-W-ETKWTKIYLP-HS-LHLH----MFVNRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNLTWAKIHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVILMIFIIWEAFASKREVTTVELTTTNLEWLHGCPPPYHTFEEPAFIKV-NN-------MAYPFQLGFQDASSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTSKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYNDLTFDSYMVPTTDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLFYGQCSEICGANHSFMPIVLELVPLKHFENWSTSMI----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSSTLLTLGLLTNILTMYQWWRDIIRESTYQGHHTPVVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIFPLNPMEVPLLNTAILLASGVTITWAHHSLMEGNRTQMIQALFITISLGVYFTLLQASEYYEAPFTIADGIYGSTFFVATGFHGLHVIIGSTFLSVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLIKIINHSFIDLPTPSNISAWWNFGSLLGICLIIQIVTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFIHIGRGIYYGSYLYSETWNIGIILLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPLGLISDSDKIPFHPYYTIKDLLGLCLLILLLLLLVLFSPDLLGDPSNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVASILILAIFPLLHTAKQRSMTFRPLSQCLFWILVADLITLTWIGGQPVEHPFIIIGQLASILYFIIILILMPITSMIENKML---KW--------MF--------FINLLSLIIPILLAVAFLTLVERKTLGYMQLRKGPNIVGPYGLLQPIADAAKLFIKEPLRPATSSTLMFTIAPILALTLALTMWIPLPMPYPLINMNLGILFILAISSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVSLAIILLSVMLINGSFTLASLTITQEHIWLIIPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNALTTLLFLGSFHNHAHPELFTTNFILKTMILTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLYISIPIMLACI-P-PQ---MNP-LIFLMIMMTMLSGTIITMLSSHWFTAWMGLEMNMFAIIPIIIKNHHPR-SIEAATKYFLTQATASMLLMLAIMLNFLLSGQW--SIISTPSSFTSFILVTALIMKLGMAPFHFWLPEVTQGTHLSSGLLILTWQKLAPFSILYQISNHINPTLLMTS-AFLSILIGGWGGLNQTQLRKILAYSSIAHMGWMAMILIYNPTLTLLNLLIYITLTLSAFMLLIINYSTSTSSL---SLLWNKTPLISLALMAILLSMGGLPPLSGFIPKWLIMQELTKNLNAILPFLMATLALLNLYFYMRLIYSSSLTIFPSMNNMKIKW-QFNNHNIYPGI-------SPIMLLSTMILPLTPMYMSLF---MN-LAISLITNMSLASLLVLIAFWLPQLNTYMEKTTPYECGFDPMGSVWLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLKLMLFMALLLISLLALSLAYEWMQKG--LEWIE-MPPIYMNIILAFTLSLMGMLVYRSHLMSSLLCLEGMMLSLFILGTTMALNMHFTLMTMLPIVLLVFAACEAAVGLSLLVMVSNTYGLDYVQNLNLLQCMLKYIIPTIMLIPLTWFSKNSMIWINSTIYSLLISLASL-MLLDQPHDMGLNFS-SLFFSDALSTPLLILTCWLLPLMLMASQHHLHPESLQRKKSYITMLILLQLFLIMTFAAAELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALMWIQNSLGTLNFLIMQLWAQPLP-HLW-----SSNFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRISILLDP-VTNHMAYPFLMLSLWGMVMTS--SMLLRQTDLKSLIAYSSVSHMALVIIATLIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMILARGLQVLLPLMSAWWLLASLTNLALPPTINLIGELFVVTSSFYWSNLTMILMGLNILITALYSLYMLITTQRGKFSHHITAIIPSYTRENTLMALHIIPLLLLTLNPKIILGITY------MNILPMS-SLLSLIILIIPITMTI-FP-KIYNP-LKYPIYVKTA-TSYAFMTSLIPTTMFIHSNQEALISNWHWITIQSFKLSMSFKFDYFSLIFMSVALFVTWSIMEFSLWYMHSDPNINRFFKYLLLFLITMMILVTANNLLQLFIGWEGVGIMSFMLIGWWSGRTDANTAALQAVLYNRIGDIGFVLSMAWFMVHSNSWELQQIFITFPM-ENSLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPILENNSTALTSILCIGAITTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFMHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKSLPFTTTSLIVGSLALTGMPFLTGFYSKDLIIESATSSYTNAWALTITLIATS-MTAVYSTRIIFFTLLGQPRSPSPIMINENNPALINSIKRLTIGSIFGGYLISMNLLPTSIPPMTMPPYIKYTALSITLIGFMLAMELNSLTYNLK--FKYPAHQFKFSNMLGYYPSIMHRIPPLSLLTIGQKLATTILDLIWLEKAIPKNITSMNLMLSI--KTSNQKGSIKLYFLS---FFISL--IMGLLISI----------------- +>Muntiacus_reevesi_micrurus_Formosan_muntjac +----MNENLFASFITPM-ILGLPLATLIVMFPSLLFPTSN-RLVNNRLISLQQWALQLVSKQMMGIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLIIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFIMIMSMF-LVLFIIFQLKISKHNFYF-NPEPM-LTKTQKQ-NIP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSIILLTLGLTTNMLTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGALLLTLSLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALISSILVLILMPLLHTSKQRSMIFRPLSQCLFWILVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPIISTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLIDMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-IIFIIILSTLMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFSLFMANSATTTLSL---SHTWNKMPVMATLILVTLLSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTLMAITALLNLYFYMRLTYSTALTMFPSVNNMKMKW-QFPTTKQMTLL-------PTMVILSTMLLPLTPILSVLE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALFLILLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVSLAGLLMYRSHLMSSLLCLEGMMLSLFVLATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWLSKGTMIWINSTTHSLLISFTSL-LLMNQFSDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLTASQHHLSKESLTRKKLYITMLILLQLFLIMTFTAAELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNTTGSLNFLVLQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLIMTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKVILGTLY------MNLFSSF-TLVTLLLLAIPILTM---SSENYKT-SNFPFYVKTT-ISCAFLTSMIPTMMFIHTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLNPS-NSNLPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPALININENNPFLMNSIKRLMIGSLFAGFIISNNIPPMTVPQMTMPHHLKMMALAVTILGFILALEISNMTQNLK--LNYPTNIFKFSNMLGYFPTIMHRLAPYMNLTMSQKSASSLLDLIWLENILPKTTSLAQTKMSA--MITSQKGLIKLYFLS---FLVTI--IISMILF----------NFHE---- +>Rucervus_eldii_ +----MNENLFASFITPM-ILGLPLATLIVMFPSLLFPTSN-RLVNNRLISLQQWTLQLVSKQMMGIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMN-ISTTMALVTFTILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LALFIIFQLKISKHNFHF-NPELT-STKTQKQ-NTP-W-EMKWTKIYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTMTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMLLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGVCLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGILLLILFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALISSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIIIGQLASILYFFIILVLMPITSTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFMSSI-P-PQT--MNP-IIFILILSTMMMGTIIVMISSHWLFVWIGFEMNMLSIIPIMMKKHNPR-ATEAAAKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPVASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTVLVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTLMAITALLNLYFYMRLAYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMIVLSTMLLPLTPILSILE---MN-LMLALLTNFTLASLLVVIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFTVALAGLLMYRSHLMSSLLCLEGMMLSLFVMASLTILNSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGKMIWINSTTHSLLISLTSL-LLMNQFSDNSLNFS-LLFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYLQNITGSLNFLVLQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-TLITLLLLTIPIMTT---SSNNYKT-SNYPLYVKTT-ISYAFITSMIPTMMFIHTGQEMIISNWHWLTVQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLNPN-DSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPFLMNSIKRLMIGSLFAGFIISNNIPPMTTPQLTMPYYLKTMALTVTILGFILALEISNMTKNLK--FNYSTNIFKFSNMLGYFPTIMHRLAPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQMKMSI--MVTNQKGLIKLYFLS---FLVTI--TVSMILF----------NFHE---- +>Procavia_capensis_Cape_rock_hyrax +----MNENLFTSFIAPS-MMGLPLAILIILFPTMLYPSPK-RLVNNRLISTQQWLTTLIMKQLMTTHNNKGRTWTLMLVSLILFIASTNLLGLLPYSFTPTTQLSMNLGMAVPLWAGTVFLGFRHKTKASLAHLLPQGTPTALIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGSATLALMH-INQTAAAISFIILFLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLNTMPWPMIITTMI-MTLFIVMQVKISKYSYPN-SLTPK-PINKTTQ-HAP-W-KTKWTKIYLP-PL-LPPQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGSPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPATTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNINTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNINWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNLTWAKIHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTAWNMVSSMGSFISLTAVILMVFIVWEAFASKREVSKVELTTTNLEWLNGCPPPYHTFEEPAFVKP----------MPYPTQLGFQDATSPIMEELLHFHDHTLMIVFLISTLVLYIISAMLTTQLSNIRALDAQEVETIWTILPAMILILIALPSLRILYMMDEINDPSLTVKTIGHQWYWSYEYTDYEDLTFDSYMIPTEELKPGELRLLEVDNRVVLPMEMPIRMLISSEDVLHSWTIPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLEMVSLKTFENWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFKSLTLLTLGLLTNTLTMYQWWRDVVREGTFQGHHTPNVQKGLRYGMVLFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGVNPLDPMEVPLLNTSVLLASGVTITWAHHSLMEGNRKHMIQALSMTIALGVYFTLLQASEYYETPFSISDGVYGSTFFMATGFHGLHVIIGSTFLMVCLLRQLKFHFTSDHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKNHPLLKTINDAFIDLPTPSNISTWWNFGSLLGACLIIQVLTGLFLAMHYTSDTMTAFTSVTHICRDVNHGWMIRYLHANGASLFFVCLYAHIGRGIYYGSYLYSETWNIGVLLLLTTMATAFLGYVLPWGQMSFWGATVITNLLSALPYIGTDLVEWIWGGFSVDKATLTRFFAFHFIMPFIIMALAMVHLLFLHETGSNNPLGLISNADKIPFHPYYTMKDLAGLVLLILTLLTLTLLFPDMLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVIALIMSILILALLPLLHTSKQRSLMFRPLSQCLFWLLVADLITLTWIGGQPVEHPYIIIGQMASTLYFTIFLVLMPIAGLIENHML---KL--------MF--------MINLLSMILPVILAMAFLTLTERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPLTSSKLMFTIAPVLALTLALTLWIPLPMPYPLINMNLSILFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVSLTIILISVLLMNGSFTLMTLSTTQEHMWLLVPLWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNTLTAILFLGTTNNPYMPETYTTNLILKTLMLTTMFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHIAMPITLASI-P-PQM--MNP-LTLSATITTLLTGTMIVTFSSHWLTTWLGLEMSMFAIIPIMITPSNPR-SIEATTKYFLTQVTASMILMMAILINFMHSGQL--SIQELHNPLASNMILVSMMMKLGLAPFHFWVPEATQGIKLSSGMILLTWQKLAPLTILYQTITSMNTTLIMLS-GILSIALGGWGGLNQPQLRKIMAYSSISHMGWMIIILTYSPTLMILNLILYITMTLSIFTMIMNNHSTTINSL---SMMWNKNPAMTMLLMITLLSLGGLPPLSGFIPKWMIIQEMTKNSMIATPLIMSITALLNLYFYMRLIYTSSLTIFPSTNNMKINW-RHSNPKYLTFT-------PTLIIMSTMILPLTPMLFILE---MN-LAIALITNTLLASLLVTIAFWLPQLYSYSEKISPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLDLMFPVSMVLISLLALGLAYEWSQKG--LEWTE-MHYIYINIIIAFSMSLLGALLYRSHIMSSLLCLEGMMLALFVLSTLIALNMQFTLATMMPIILLVFAACEAAIGLSLLVMVSNTYGLDYVQNLNLLQCMLKIIVPTLMLIPLTWMSKQNLMWINTTTYSFMISLLAF-LLLNQTHEPGLNFS-TTSFSDTLSTPLLILTTWLLPLMLLASQHHLMNEPTTRKKTYITMLISLQLLLIITFTATELIMFYIMFESTLIPTMIVITRWGNQSERLNAGLYFLFYTLLGSLPLLITLLHMQNTLGSLNILISPYYTNNLP-NSW-----STNLMWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIFLDP-LTKSMAYPFLLLSMWGMLMTS--SICMRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSYMGATTLMIAHGLTSSLLFCLANTNYERTHSRTMILTRGLQTLLPLMATWWTLASLTNLALPPSINLIGELLVIMSTFSWSNTTLILTGLNMLITAMYTLYMLTMTQRGKPSHHNKNMTPTFTRENTLMTLHLIPLILLPINPAIITGTCY---MKVINLFSTS-VLLTLLILMIPIMTS---MTRTYKT-NQYSNYVKTI-TQCAFITSMIPMLMFTMSNQEMIISNWHWMTIHTTNLTLNFKLDYFSLVFIPVALFVTWSIMEFSLWYMHSDPNLNKFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFMLISWWYGRADANTAAMQAILYNRIGDIGFVLTMTWFLLHYNSWELQQIFMINSK-ET-LPALGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLLETNKLALTLTLCLGAVTTLFTAICALTQNDIKKIVAFSTSSQLG--LMTVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLYKTMPLTTTSLIIGSLALTGMPFLTGFYSKDLIIESMNTSHINAWALLITLVATS-MTAMYSTRIIFFALMGQPRYPPLMSMNENNTFLTNPIKRLMAGSIVAGYLLSISLCPMLTSQMTMPLYLKLTALIITLTGFTLAMELNNITYHLK--FYPPKYPHKFSIMLGYFPTIIHRLPPYLSLNASLTAASNVMDLIWLEKLLPKWLASLQKTAST--TTSSQKGLIKLYFLT---FLVSM--TTGILLTI----------------- +>Tragelaphus_scriptus_bushbuck +----MNENLFASFITPV-ILGLPLATLIVLFPSLLFPTSD-RLVNNRLISLQQWALQLVSKQMMAIHNTKGQTWTLMLTSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVIMGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLTLMN-ISTTTAFITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMIMSMF-LTLFIIFQLKISKHNFYH-NPEPT-TTKMSKQ-NTP-W-ETKWTKTYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPVYINL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTPELMPGELRLLEVDNRVVLPMETTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLEYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMILLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGHRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNHGWIIRYMHANGASMFFICLYMHVGRGMYYGSYTFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDMDKIPFHPYYTIKDILGALLLILILMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILILMPLLHTSKQRSMMFRPLSQCLFWILAADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVLMPATSMIENSFL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFTKEPLRPATSSVSMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFIIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPILLAGI-P-PQT--MNP-IISTIILLTIMLGTIIVMISSHWLFIWIGFEMNMLAIIPIMMKNHTPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPVASMIMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLTIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPIMTVLVLVTLLSMGGLPPLSGFIPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLAYTTALTMFPSTNNMKMKW-QFSTTKRMTLL-------PTMIVLSTMLLPLTPMLLILE---MN-LMMTLLTNFSLATLLVIIAFWLPQMNSYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLAASLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMAALTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTTMLMPLTWLSKNNMIWINPTMHSLLISLTSL-LLMNQFGDNSLNFS-PMFFSDSLSTPLLILTMWLLPLMMMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALLYIQKTVGTLNFLVLQYWVQPVS-GSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITLLLNP-TTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIVSTFSWSNMTIILMGMNMVITALYSLYMFIMTQRGKHTHHINNISPSFTRENALMSLHIIPLLLLSLNPKIILGPLY------MNMFSSF-TLITLLLLTMPVMMT---SSNTHKT-LNYPLYVKTT-ISYAFFTSTIPMMMFIHTGQETIISNWHWLTIQTLKLSMSFKMDYFSMMFIPVALFVTWSIMEFSMWYMHSDPNIDKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDLQQIFMLNPN-NSNMPLLGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGVPFLTGFYSKDLIIETANTSYTNAWALLLTLVATS-FTAIYSTRIIFFALLGQPRFPTLVIINENNPLLINSIKRLLVGSLFAGFIISNSMPPMTIPQMTMPFYLKTTALMVTILSFVLALEISNMTQNLK--LYHPSNTFKFSNMLGYFPTIIHRLIPYANLTMSQKSASSLLDLIWLEAILPKTISLTQMKMSI--MVTNQKGLIKLYFLS---FLVTI--LISMILF----------NFHE---- +>Capra_pyrenaica_Spanish_ibex +----MNENLFTSFITPM-VLGLPLVTLIILFPSLLFPSSN-RLINNRLISLQQWALQLVSKQMMSIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKTSFAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTN-ISPTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTTILSMF-LALFIIFQLKISKYNFYH-NPEMT--TKVLKQ-NTP-W-ETKWTKIYLP-LL-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSTALLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRSHMLQALFITITLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYMSIYWWGS--MTNIRKTHPLMKIVNNTFIDLPTPPNISSWWNFGSLLGTCLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHIGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGAMLLILVLMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILVLVPFLHTSKQRSMMFRPISQCMFWVLVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVMMPAASTIENNLL---KW--------MF--------MINILTLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLTIILLSILLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINFIIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-TIFIIILMTVMLGTAIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVTKLFHPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILPYNPTMMLLNLIIYITMTSTMFLLFMANSTTTTLSL---SHTWNKMPIMTTLALVTLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFSTTKRMTLL-------PTLTVLSTMLLPLTPILSILE---MN-LMIALLTNFTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTANLNTMLTMALLLISLLAMSLAYEWTQKG--LEWTE-MSLVYMNIMTAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNSMIWINSTLHSLLISFTSL-LLMNQFGDSSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESPTRKKLFISMLVLLQLFLIMTFSATELIFFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIHIQNTVGSLNFLILQYWAQPVP-NSW-----SNVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITLLLNP-ITDYMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSAFSWSNITIILMGLNMVITALYSLYMLITTQWGKHTHHINNILPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSL-ALTTLTLLTAPIMMT---NLNIYKS-TNYPLYVKTV-VSCAFITSMVPTTMFIYTGQEMVISNWHWLSIQTLKLSLSFKMDYFSVMFIPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILTMAWFLINLNTWDLQQIFMLKPE-NSNLPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKLAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAVYSTRIIFFALLGQPRFPALININENNPFLINSIKRLLIGSLFAGFIISNNIPPMTIPQITMPHYLKMTALAVTTLGFILALETANMTHHLK--FNYSSNTFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLEAILPKTISQAQMKMAT--TTTNQKGLIKLYFLS---FLVTI--LVSTILF----------NFHE---- +>Oreotragus_oreotragus_klipspringer +----MNENLFASFITPV-IFGLPLATLIVLFPSLLFPTSN-RLTNNRLISLQQWALQLMSKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKISKHNFHH-NPELM-LTKKLTQ-SKP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVVLMIFIIWEAFASKREVMTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFIETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGISSDTDKIPFHPYYTIKDILGALLLILALLLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILTPMLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPMASTIENNLL---KW--------MF--------MINILTLIVPILLAVAFLTLVERKILGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFNNPYIPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-ITFIIIMLTIMLGTTIVMISSHWLLIWIGFEMNMLAIIPIMMKKYNPR-ATEASTKYFLTQSTASMLLMMAVIINLLFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGISLFSGLILLTWQKLAPMSVLYQISPFMNLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLTIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPIMTVLVLTTLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PVMSVLSTMILPLTPILSILE---MN-LMLALLTNLTLATLLVTIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLITLLAVSLAYEWIQKG--LEWTE-MSLVYMNIMMAFTVSLAGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTVMLMPLTWLSKNNMIWINPTMYSLLISLTSL-LLMNQFGDNGLNFS-LIFFSDPLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTATELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYIQNTTGSLNFLILQFWVQPMP-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTMLLNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMMLARGLQMFLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLIMTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNMFSSL-TLTTLLLLTIPIMMT---SSNTYKT-SNYPLYVKTT-ISCAFLVSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFVGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGLILSMAWFLTNLNTWDLQQIFILKPN-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTEDNKFIQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNSPLTNSIKRLLMGSLFAGFIISNNIPPTMIPQMTMPYYLKMMALMVTILGFILALEISNMTYYLK--FNYPSNTFKFSNLLGYYPTIMHRMTPYMSLTMSQKSASSLLDLIWLENVLPKTTSLMQTKMST--TITNQKGLIKLYFLS---FLITI--LTSMILF----------NFHE---- +>Eulemur_fulvus_fulvus_brown_lemur +----MNENLFASFITPT-IVGIPIVIFIVMIPSILFPSPT-RLINNRLTSLQQWLIQLILKQLMLIHSIKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAAAVIKGFRHKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLSS-ISPTTASITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITIFSMI-LTLLIVFQLKVSKFNYPL-SPTLK-DINKYSH-TNP-W-ETKWTKIYLP-LS-LPQQL---MFINRWFYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDTWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSIGSFISLTAVMLMVFMIWEAFASKREVLMVELTPTNLEWLHGCPPPYHTFEEPAYVKA----------MAYPVQLGFQDAASPIMEELLYFHDHTLMIMFLISSLVLYIISLMLTTELIHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEITTPSLTLKTMGHQWYWSYEYTDYENLCFDSYMTPPSDLKPGELRLLEVDNRVVLPTELPIRMLISSEDVLHSWTIPSLGVKTDAIPGRLNQATLMASRPGVYYGQCSEICGANHSFMPIVLELVPLKHFEEWLLSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNNTTLLSMGMLTNLLTMYQWWRDIVREGTFQGHHTSIVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGDRTHMLQALLITITLGIYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MNNIRKNHPLMKIMNNSFIDLPAPSNISSWWNFGSLLGACLTLQIITGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFLCLFIHIGRGLYYGSFTLTETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVLVHLLFLHETGSNNPLGTSSDSDKIPFHPYYTIKDLLGLLLLILLTMMLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILAIIPILHTAKQRSMLFRPLSQCLFWTLTADLFILTWIGGQPVEYPFITIGQAASILYFTLILILMPMVSLIENKML---KW--------MF--------MLNLLLLIVPILLAMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPLPYPLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHTPETYTTSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLTSCI-P-PQM--MKP-IVLMPIMLTIFMGTTLTMISSHWLLMWIGLEINMLAIIPILMEKANPR-STEAATKYFLTQATASMLLMFTIVINAMYSGQW--GITNMCNQLISFSIILALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISIMLQIYPSINPNILLLI-TTLSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMMAILMYCPSMTMLNLLIYLMLTIAMFTMLNINTSTTTLAL---SNLWNKAPTMTITILISLLSLGGLPPLTGFLPKWIIAQELTKNNNIMLATTMTILALLNLYFYLRLIYSTSLTMFPTLNNLKMKW-QFQQTKQMFLL-------PPLIILTTLTLPLSPALLILN---MN-LPLALTTNIVLTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNPKLMLAVALILVSILAAGLAYEWLQKG--LEWVE-MPSISTNIILAFITALLGMLIFRSHLMSSLLCLEGMMLSMFILSTLTILNLHFTASFMMPILLLVFAACEAAVGLALLVTVSNTYGLDYIQNLNLLQCMLKIIIPTIMLFPVTWYSNKTMIWINTTSHSLLISLAGL-SFLNQFSDNSNNFS-LTFFSDPLSSPLVILTMWLLPLMIMASQYHLTKESWILKKLYLSMLISLQMFLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYIQNYMGSLNMLTMKFYLQEMP-NSW-----SNSILWMACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTILDP-LTKHMAYPFLMLCLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVVVGILIQTPWSFMGATILMVAHGLTSSMLFCLANSNYERIHSRTMLLARGIQALLPLMATWWLLASLTNLALPPSINLIGELFVTMASFSWSNITIILVGLNMLITALYSLYMLTITQRGKLTYHTYNLNPSLTRENTLMSMHMLPLLLLTLNPKIILGLTY------MNLLTSF-TLVTLMILTLPVIMN---IMNAYKD-YSFTLHVKSS-IACAFTTSLIPTALFISSGQEAIIFHWHWMTIQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMYSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLMYSNTWEFQQMFMLNHN-PSMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMESNQSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANLSNVNAWALTITLIATS-MTAIYSTRIIFYALLGQPRFTTSTPINENNPLLINSIKRLTLGSIFAGFFLTNNILPMNTPQMTMPLHLKLTALTVTIMGFALAMELNLMTKNLS--FKLPSHLFNFSNSLGYYPTTTHRLIPSHNLNLSQNTASLLLDLIWLEKAMPKNLSHLQMLSST--IISNQTGLIKFYFLS---FLMSL--LFTLLLFM----------------- +>Murina_ussuriensis_Ussurian_tube-nosed_bat +----MNENLFASFITPT-MMGLPVVIFIIMFPSMLFPSAT-RLINNRLISIQQWLIRLATKQMMNIHSKKGQTWALMLTSLMMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKMSLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGSATLALMD-INMTTALITFLILVLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSTI-ITLFIMFQLKISKHYYYH-KPEPA-MTMKQKH-STP-W-EAKWTKIYLP-LL-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLMIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFIHWFPLFSGYTMNTSWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSMGSFISLVAIMLMVFMIWEALASKREVMLVELPTTNLEWLHGCPPPYHTFEEPTYINP-K--------MAYPFQLGLQDATSPIMEELTSFHDHALMIVFLISSLVLYVLTLMLTTKLTHTSTMDAQVVETIWTILPALILITIALPSLRILYMMDEINNPSMTIKTIGHQWYWSYEYTDYEDLVFDSYMIPTSELSPGQFRLLEVDNRVVLPAELTIRMLITSEDVLHSWAIPSLGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICGSNHSFMPIVLEMIPLKHFEKWLSSMT----------MTHQAHAYHLVNPSPWPLTGALSALLMTSGLVMWFHFNSTPLLLLGLTVNSLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLNPMEVPLLNTSVLLASGVTITWAHHSLMDANRKHMMQALFITIALGLYFTILQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFFRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLAKIINSSFIDLPAPSNISSWWNFGSLLGICLALQITTGLFLAMHYTSDTMTAFNSVTHICRDVNYGWVLRYLHANGASMFFICLYLHIGRGLYYGSYMYKETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLIMMTTLMALVLFTPDALGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIIIPLLHTSKQRSMAFRPLSQCLFWLLTADLLTLTWIGGQPVEHPYVIIGQVASILYFSIIIILMPLVSLMENHLM---KW--------MY--------FINLLATIIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSPMLFIIAPTLALTLALTMWTPLPMPYPLINMNLSMLFILAMSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSFTLLTMITTQEHIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNAITIILFLGAYHIMMTPELYTLNFTTKTLLFTAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHTTLPIVLASV-P-PQT--MNP-LTMSLVLTTMMLGTLLVMTNSHWFLIWMGFEMNMLAIIPLLTKEHNPR-STEAATKYFLTQSTASMLLMAAVFVNLLHTGHW--TVMKPINLTACAMMTMALTMKLGLTPFHFWVPEVTQGIPLMSGLILLTWQKLAPLSILYIILPYMNTDILMIM-ALMSVAVGGWGGLNQTQMRKIMAYSSIAHMGWMAAVMIYNPSMTLLNLYLYIPMTITMFMLLMMNSTTTMNTL---SLTSNKMPLITIFLLITLMSLGGLPPLTGFMPKWLIIQEMMKNNNIFMSTTMTLLALLNLYFYTRIMYITSLTMFPTMNNMKMKW-QHANTKKMKHL-------PSMIIVSTMILPLMPMIMILE---MN-LMWTLTINAILASVLVTIAFWLPQMNIYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLMNMLLTALFLISLLIASLVYEWTQKG--LEWSE-MSLTLMNILMAFVLSFLGLLLYRSHLMSSLLCLEGMMLSLFTLITMTILITHSTMTSMTPIIMLVFAACEAALGLSLLVAVSNTYGTDYVQNLNILQCMLKIITPTIMLIPLVWMSKGNMIWINPTMYSLMINMTCL-PLMNQFNDNSLNLS-TTFFSDSLSTPLLMLTMWLLPLMIIASQFHMKKESLARKKLYLTMMILLQIFLIMTFSVTELMMFYILFEATLLPTLIMITRWGGQAERLNAGIYFLFYTLVGSLPLLIALIYTQHTTGSLNLLLLQHWNEPTT-HIW-----GDSVLWLAYMMALMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNP-TVNFMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAILIQSPWGFTGAVTLMIAHGLTSSLLFCLANSNYERTHSRTMILARGLQTILPLMAAWWLLASMMNLALPPSINLIGELFVTMAMFSWSNFSIIFLGINITITALYTLYMLTTTQRGKYTYHILSIKPSFTRENTLMSLHLLPLLLLMINPKIIMGNMY------MNISSTF-MILSLVILMIPLVYT---PNKITNS--TYPEYVKTM-TFYSLMMNLPTTMTFIQHGQETMISNWHWLTIQTVNLNLNFKLDYFSIMFVPVALFITWSIMEFSMWYMHSDPNINRFFKYLLTFLITMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFILSMAWFLLYSNSWELQQIFALEQK-NTTFPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLIENNKLIQSTAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKPMPFTTTALITGSLALTGIPFLTGFYSKDLIIETANTSYMNAWALMITLIATS-LTAIYSTRIIFFVLLGKPRFPSLVLINENNPLLINSITRLLIGSIFAGFLISNNITPTTVPQMTMPPHLKLTALLVTLAGFIIALELNNMTYNLK--HKNPSIMFKFSAALGYFPLTMHRLNPLVNLTISQKLITMLLDLLWLETTLPKLTSKIQQNTSI--TVSGQKGLIKLYFSS---FLITI--VVALTVF----------NFHE---- +>Galeopterus_variegatus_Sunda_flying_lemur +----MNENLFNSFTTPT-LMGLPIVALIIFLPNMMYPSPS-RLINNRLTSLQMWLVQLILKQLMTVHNIKGRSWSLMLISLILFIGSTNLLGLLPHSFTPTSQLSLNLGMAIPLWAGTVILGLRNKMKKSLAHLLPQGTPTPLIPMLVIIETISLFIQPLALAVRLTANITAGHLLMHLTGNATSTLIT-LSPPTTPTIFTLLVLLTMLELTVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTITFTI-LMLFTTFQLKLLKFTYYP-DPTEK-PIKSFKP-KNP-W-EKKWTKIYLT-HS-QPQH----MFINRWLFSTNHKDIGTLYLLFGAWAGTVGTALSLLIRTELGQPGAFLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPTGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKQEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLNIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLNTTWAKIQFPVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMAFMTWEALASKREVLTVELPTTNLEWLHGCPPAYHTFEESTFVKL-NEKG-----MAHPLQLGLQDASSPIMEELLYFHDHALMIVFLISSLVLYTISLMLTTKLMHTSTMNAQMVETMWTILPAAILTSIALPSLRILYMTDEINNPLLTIKTMGHQWYWSYEYTDYMDLNFDSYMIPTLDLKPGELRLLEVDNRTVLPMETPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLSATRPGLFYGQCSEICGSNHSFMPIVLELIPLKHFETWSALTS----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSGTLLTLGLLTNSLTMYQWWRDVVRESTFQGHHTAVVQTGLRYGMILFIMSEVFFFAGFFWAFYHSSLAPTPNLGGYWPPAGINPLNPMEVPLLNTLVLLASGVSITWAHHSLMEGNRKHSLQALLITISLGIYFTLLQTSEYFEASFTISDGIYGSTFFVATGFHGLHVMIGSTFLTICFLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTNIRKSHPLLKIINHSFIDLPTPSNISTWWNFGSLLGTCLVIQIITGLFLAMHYTADTTTAFSSIAHISRDVNYGWIIRQTHANGASMFFICLFIHTGRGLYYGSHTYSETWNIGIILLFLIMATAFMGYILPWGQMSFWGATVITNLLSAIPYIGTNMVEWIWGGFSVDKATLTRFFALHFILPFAILALVIVHLLFLHETGSNNPSGIPSNSDKIPFHPYYTIKDILGMLLLVLLLLTLTLFYPDLLGDPDNYTPANPLNTPSHIKPEWYFLFAYAILRSVPSKLGGVLALITSILILALIPTLRLSKQRSMMFQPINQCLFWILTANLLTLTWIGSQPVEHPFTLIGQAASLLYFSTILILMPLASLIENKLL---KW--------MH--------TINTLSLIIPIMLAMAFLTLVERKTLGYMQLRKGPNIVGPFGLLQPFADAMKLFTKEPLQPLTSTTLLFITAPALALTLALTTWMPLPMPYPLINLNMGMMFILAISSLSAHSILWSGWASNSKYALIGALRAVAQTISYEVTLVIILVAVLLMNGSYTLTTLITTQEFMWLIIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGSFALFFMAEYINIIMMNALTITIFLGTSYNTSMPETFTLNFTTKTLLLTTLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISMPILLSGI-P-PQT--MNP-MTLFTILVTLLTGTTLTMLSSHWLLIWTGLEMNTLALIPILMKKTNPR-STEAATKYFLTQTTASMLLMMAILINMTSSGQW--TTTNMNNPSTTLLVTLALIMKLGLSPFHFWVPEVTQGVPLTSGMILLTWQKLAPISILFQLAPLLSPHIILIS-ATLSILVGGWGGLNQTQLRKIMAYSSISHMGWTTAILIYNPSTTILNLLVYILLTLTTFNLLTIYANHTTSSL---ALLWNKNSLIALAIPLTLLSLGGLPPLTGFLPKWAIIQEMVKNNNIIMPTFMAIAALLNLYFYMRLIYSTALTMFPTTNNTKTKW-RFESTKQTLFL-------PTLVILSTLLLPLAPIPPMLD---MN-LTLTLFINSTLALLLITIALWLPQTYIYAEKSSPYECGFDPVGSARLPFSMKFFLVAITFLLFDLEITLLLPLPWATQMDNLTLMLIIALILIITLALSLAYEWSQKG--LEWAE-MPPIYINIILAYTASLVGLLMYRSHFMSSLLCLEGMMLSLFILATILSLNLHFTLSFTLPIILLIFAGCETAVGLALLVMISDIYGLDHVQNLNLLQCMLKLIIPTIMLIPTTWYSSNKMIWINSTTHSLLISLITL-LFLNHNDENSMITS-LSFFSDPLSSPLLMLTTWLPPLMIMASQHHLSKETHTRKKLYITMLVLLQLFLIMTFAATELMMFYIMFEATLIPTLIIITRWGNQPERLNAGLYFLFYTLFGSMPLLIALTYIHNSTGSLNLLLLPHWTQMSP-PLW-----SSTLLWTACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNP-PTTPMTYPFLILSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWGFTGAMTLMIAHGLTSSLLFCLANSNYERVHNRTMILARGLQVLLPLMTTWWLLASLANLALPPTINLIGELFVMMTAFSWSNITIILTGLNMLITALYTLFMLTTTQRGTLTHHINSIKPTFTRENSLMLMHIIPLLLLSLNPKTTLGLFH------MNLTMSL-MITSLIILIIPT------LSNMHKH---YPYYVKTL-TQIAFLTSLLPALTFIYSNQDAVTSNWHWITVQTLELSINLKLDYFSMIFTPTALFITWSIMEFSLWYMKPDPNINKFFKYLLIFLTMMLILTTANNLMQLFIGWEGVGIMSFLLIGWWYSRTDANTAALQAIIYNRIGDIGFILAMMWFSTYSNTWNLQQLFILNTD-PNLTPLVGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKTVQTLALCLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICMHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLYKTMPLTSTSLTIGNLALTGMPFLTGFYSKDLIIETMNTSYTNAWALTVTLIATS-LTAAYSTRIIFLTLLGQPRFLALMNTNENNPYFANPTKRLMVGSIFAGFIISNSIPPTDIPQMTMPPYLKLSTLLITTFGFILALELCLDSLSPN--PKSPSPLHNFSTLLGFFPTLAHRMVPHLNLTMSQYTASQTLDLTWLEKTTPKSIAHLQTLAAM--NVSNQKGLIKLYFLS---FLITI--TVTTLLVI----------------- +>Rupicapra_pyrenaica_Pyrenean_chamois +----MNENLFTPFITPM-MLGLPLVTLIILFPSLLFPTSN-RLINNRLISLQQWILQLVSKQMMSIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTLLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTTAALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFTMILSMF-LALFIIFQLKISKHNLHH-NPEST-MTKAPEQ-DTP-W-KTKWTKICLP-LS-LPL-----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMTFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMNAQEVETVWTILPAVILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMVPTSELKPGELRLLEVDNRVVLPMEMTVRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASMS----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMILLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTMAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGAMLLILTLMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLVPLLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVMMPVASTIENNLL---KWK-------MF--------MINVLMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSASMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPCMPELYTVNFIIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSGI-P-PQT--MNP-IIFIIILMTVMLGTTIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFMTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLDLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMTNSTTTTLSL---SHTWNKAPIMTVLALVTLLSMGGLPPLSGFMPKWMIIQEMTKNNSVILPTFMAITALLNLYFYMRLSYSTTLTMFPSTNNMKMKW-QFPTTKRMTLL-------PTMTVLSTMLLPLTPILSILE---MN-LMITLLTNFSLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIVPTMMLMPLTWLSKNSTIWINSTLHSLLISLTSL-LLMNQLGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESLARKKLFISMLILLQLFLIMTFAATELIFFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIHIQNMMGSLNFLVLQYWVQPMS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-TTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMVAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLIMTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSL-TLTTLALLTAPIMAT---NLNIHKS-ANYPLYVKTT-ISCAFITSMIPTMMFIHTGQEMVISNWHWLTIQTLKLSLSFKMDFFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLVNSNTWDLQQIFMLKPD-NSNLPLMGLVLAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLIEDNKLVQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGIPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPLLINSIKRLLIGSLFAGFIISNSIPPTTIPQMTMPTYLKLTALAVTILGFILALEMNNMTHYLK--FNYPSNMFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLETILPKTISLAQMKMST--TITNQKGLIKLYFLS---FLITI--LISTILF----------NFHE---- +>Ziphius_cavirostris_Cuviers_beaked_whale +----MNENLFASFTVPV-MLGIPITTLIIMFPSILFPTPS-RLINNRVISLQQWLTKLTSKQLMNTHTSKGQTWSLMLISLLLFIASTNLLGMLPHSFTPTTQLSMNIGMAVPLWAGTVITGFRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGKTTLVLMN-INLSVALITFTILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLLVISSML-LALFTLFQLKISKHLYYP-NPKMM-TTKSEKQ-QTP-W-NTTWTKIYLP-LS-QSQ-----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGSPDMAFPRMNNMSFWLLPPSFLLLMASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGASSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNSTWAKIHFVIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVDHTSTNLEWLNGCPPPYHTFEEPAFVNP-KWS------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVITLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMVIPMEMTVRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSTSML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSIFLLALGLLTIILTVSQWWRDVIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIMLGIYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQMKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIINNAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLYAHIGRGLYYGSYIFQETWNIGVILLLAVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAAVHLLFLHETGSNNPTGIPSDMDKIPFHPYYTIKDILGALLLIAILLALTLFAPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLLFIPLLHTSKQRSMMFRPFSQFLFWLLVADFLTLTWIGGQPVEHPYMILGQLASILYFLLILVLMPMASLIENKLL---KW--------MF--------MINILMLMLPILLAVAFLTLVERKVLGYMQLRKGPNIVGPCGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPILALTLALTMWCPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLTTTQERLWLLVPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGAFHDPYMPELYTTNLILKTLLLTMAFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMTAGI-P-PQT--MNP-LVFIIILTTLITGTMIVITSSHWLFAWIGFEMNMMAIIPIMMKNPNPR-AVEASTKYFLTQATASTLLMMAVIINLMYSGQW--TITKLFNPTASMLMTMALAIKLGLSPFHFWVPEVTQGVPLTTGLILLTWQKLAPLSVLYQISPSINLNLMLTM-SLLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILLYNPTLTLLNLLIYITMTFTMFMLFIQNSTTTTLSL---SQTWNKAPITTTLTMLTLLSMGGLPPLSGFMPKWMIIQELTKNDTLIMPTLMAITALLNLYFYMRLTYSTALTLFPSTNNMKMKW-QFHSTKRMTLL-------PTAIVMSTMLLPLTPMLSTLL---MN-LLLTLTTNMTLALLLVIIAFWLPQLNTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLNTMLTMTLFLISLLAASLAYEWTQKG--LEWAE-MSLVHMNVIVAFTLSLVGLLMYRSHLMSALLCMEGMMLSLFVLAALTILNSHFTLASMMPIILLVFAACEAAIGLALLVTISNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKGNYIWINSTAHSLLISFTSL-LLLNQFNDNSLNYS-LTFFSDSLSTPLLMLTMWLLPLMLMASQSHLLKEPLTRKKLYITMLITLQALLIMTFTAMELILFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALTYLQNTMGTLNFLLLQHWAQPLS-PSW-----SNTLMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITPLLNP-LTEHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFLPLMAAWWLLASMTNLALPPTINLIGELLVVMSAFSWSNLTIILMGTNIVITALYSLYMLIMTQRGKHTHHINNLTPSFTREHALMALHIMPLLLLSLNPKIILGPLY------MNLFTSF-TLLTLLILMFPILMS---NTNFYKN-NKYQHYVKNI-TFCAFIISLIPAMMYLHTNQEALISSWHWTTIQTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSTWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRADANTAALQAVLYNRIGDIGFLLSMAWFLSNTNTWDLQQIFMLHQN-SLNLPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLIENNKLAQTMTLSLGALTTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTSALIVGCLALTGMPFLAGFYSKDPIIEAATSSYTNAWALLLTLIATS-LTAIYSTRIIFFALLGQPRFPPLITTNENNPSLINPIKRLLIGSIFTGFILTNSIPPTTTPLMTMPLYLKLTALTVTTLGFILAFEINLNTQYLK--HTQASNFSKFSTLLGYFPTIMHRLPPHLNLLMSQKLSTSLLDLIWLETILPKTTSLIQMKAST--LTSNQQGLIKLYFLS---FLITI--SLSLILF----------NYPE---- +>Lepus_hainanus_Hainan_hare +----MNENLFSSFITPT-MMGLPIVILIIMFPTLLFPTPT-RLINNRLVSAQQWLAQLILKQMMMMHSPKGRTWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGDAALALIS-ISPTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLVTIIAMV-LTLFTLIQLKFHKYSYPL-SPAPK-TFKSTSF-PAP-W-ETKWTKICSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDQTWAKIHFTVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMVMIFMIWEAFASKREVETVELTTTNLEWLHGCPPPYHTFEEPAYVKA----------MAYPFQLGFQDASSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPCLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLNPGDLRLLEVDNRVVLPMELPIRMLISSEDVLHSWAMPSLGLKTDAIPGRLNQATLISTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSLSMI----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSPSLLLIGLLTNTLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIKPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMQQALAITILLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCLLRQLHFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNHSLIDLPTPSNISTWWNFGSLLGLCLMIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWLIRYLHANGASMFFICLYMHVGRGIYYGSYTYLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTALVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMIHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDALGFLMLILPLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIFPFLHMSKQRSMMFRPISQVLFWILVADLLTLTWIGGQPVEHPFITIGQVASILYFSIILILIPLASLIENKIL---KW--------MF--------LINTLLLILPVLLAMAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPLTSSSLLFIIAPTLALTLALSMWLPIPMPYPLINLNMGMLFILATSSLAVYSILWSGWASNSKYALFGALRAVAQTISYEVTLAIILLCVLLMNGSFTLSSLITTQEYMWILFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNIIMMNALTTILFLGSFHSHTNPEVYTINFATKTLLLTMTFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHISMPIMLSSI-P-PHM--MNP-LIFSIILFTLFLGTMITMFSSHWLTMWIGLEMNMLAIIPILINKPTPR-STEAATKYFLTQAMASMILMMAITLNILDSGQW--TLINPQNHLTPIMIMLALIIKLGMAPFHFWVPEVTQGVPLKSGLILLTWQKLAPLSILYQISPSIDSTMMMLV-AILSIMVGGWGGLNQTQLRKILAYSSIAHMGWMAAIITFNPNTMILNLIIYILLTIPMFMMFIQHTSTTTLSL---SQMWNKAPLMVTAILITLMSLGGLPPLTGFIPKWIIIQELTKNGNIIMPTMMAMLALLNLFFYLRLIYSSSLTMFPTTNNLKMKW-QFQSMKRMTFM-------APLIILSTMFLPLTPMLSVLN---MN-LILVLLINMTISLVLVTIAFWLPQLNIYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAAQFNNLNLVLIMALMLISILALGLAYEWIQKG--LEWVE-MPSIYINILLAFIFALLGMLIYRSHLMSSLLCLEGMMLSLFILITLTALNMHYTLSFMFPIVLLVFAACEAAIGLALLVMVSNTYGMDYVQNLNLLQCMLKTIIPTIMLIPTVWWSKNHMIWINATVYSLLISLTTF-LLLNQPNDTNLNLS-TTFFSDALSTPLLMLTVWLLPLMILASQHHLGKESLLRKKTYISLLISLQIFLVMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLIGSLPLLVALIHLQNSMGSLNSLLIQLSNEHLL-ASW-----SNSLMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITILLNP-ITEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERVHSRTMLLARGLQTVLPLMAAWWLLASLTNLALPPTINLLGELLIVMASFSWSNLTIILMGTNVLITALYSLYMLSTTQRGKFTYHTNNISPTFTRENTLMMLHLTPLLLLSINPKIILGPMF------MNLFSTS-MAVSIIILVLPIMAS---FTNIFNH-NIYPYYVKTS-VSYAFMVNLIPTLIFIISNQETMVSNWHWMTIHTLKLTTSFKLDYFSMLFTPIALFVTWSIMEFSMWYMHSDPKINQFFKYLLMFLITMLILVTANNPSQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFIMTMAWFAINLNTWEFQQMFMSDNN-ITILPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSSMVVAGVFLLIRFHPLLENNKTAQTLILCLGAITTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKTLPFTSSALTIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALIITLIATS-LTAVYSTRIIFFALLGQPRYPALIIINENNPSLMNSIKRLALGSIFAGFLITNLVSPNNIPQMTMPLYMKMTALFVTILGFSIAMELNQLSLHLK--MSTQSSSFNFSNMLGFFPTTMHRLLPHINLSASQDIATLLLDMTWTEKAIPKNISDIQILAST--SVSSQKGLIKLYSLS---FLISM--LLALFILA----------------- +>Phascolarctos_cinereus_koala +----MNKNLFTQFITPT-IMDTTMLPMIMYFPCLILSTPK-HLFSNRIQTLQIWLIRLITKQMMLLHNKQGQTWTLMLMSLILFISSTNLLGLLPYSFTPTTQLSMNISMAIPLWMATVIMGLRNKPKTSLAHLLPQGTPTPLIPMLIIIETISLLIQPLALAVRLTANITAGHLLIHLITSATLALLS-INMIASTMTFIIFLMLMILELTVALIQAYVFTLLVSLYLHNNSMPQLNMSMWPLTITLTM-LTFFCMYQLKMINQTMTSMTPKNEKKMP-TKT-QLP-W-NKKWTKIYLP-NS-LPPQL---MFINRWLFSTNHKDIGTMYMLFGAWAGMVGTALSLLIRMELGQPGALIEDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLASNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPALSQYQIPLFVWSVMITAVLLLLSLPILAAGITMLLTDRNLNTTFFDPTGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTFYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGIKVFSWLATLHGGNIKWSPAMLWAIGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNNTWTKIHFTVMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTLWNILSSMGSIISLTAVMLMIFIIWEAFASKREVSTLELTTTNIEWLHGCPPPYHTFEQPAFIKT----------MPYPMQLGFQDAASPIMEELVYFHDHTLMIVFLISSLILYTIMLMLTTKLTHTNTINAQEVETMWTIIPAVILVFIALPSLRILYMMDEIHNPYLTVKAIGHQWYWSYEYTDYEDLTFDSYMIPTQDLSPGQFRLLETDNRMVLPMDLPIRVLISSEDVLHAWTLPSLGVKADAIPGRLNQITLTSTRPGVFYGQCSEICGSNHSFMPIVLEMTTLKYFEKWSSTML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLTMWFHSNSLLLLMTGLTCMLLTMYQWWRDIIREGTFQGHHTPVVQKNLRYGMILFILSEAFFFLGFFWAFYHSSLAPTPEIGSCWPPTGIHPLDPFEIPLLNTSILLASGVSITWAHHSLMEGHRNHTIQALSITILLGLYFTMLQAMEYYEASFTMSDGIYGSTFFMSTGFHGLHVIIGSTFLTVCLMRQLKYHFTTTHHLGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNPRKTYLLMKIINKTFIDLPTPSNISTWWNFGSLLGMCLMIQIITGLFLAMHYTPDTSTAFSSVAHICREVNYGWLIRNLHANGASVFFMCLYLHIGRGIYYGSYLYKSTWNIGVILLLMTMMTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSTLVEWIWGGFSVDKATLTQFFALHFILPFIITALTMVHLLFLHETGSNNPLGINSNPDKIPFHPYYTTKDTMG-LMLLLILLTLTLLSPDTLSDPNNFSPANPLNTPQHIKPEWCFLFAYTILWSIPNKLGGVLALLASILVLFIMPFLHTSKQSSLMFRPISQTLFWILVTNLLVLTWIGSQPVEQSYTTIGQVASTTYFLLIIILMPMAGLLENFMLK-PK---------ML--------TINILLYTFPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPVADAVKLFTKEPSRPATSSTLMFITAPIMALTLALTIWVPLPMPHALIDLNLGVLFILTLSGLSVYPILWSGWASNSKYALIGALRAVAQTISYEVTLAMILLSITLINGSYTLKNLAITQENMWLLVSTWPLAMMWFISTLAETNRTPFDLTEGESELVSGFNVEYSAGPFAMFFLAEYTNILAMNAMTTILFLGSPINHNFTHINTLSFTLKTLMLTFLFLWIRASCPRFRYDQLMHLLWKNFLPLTLAFCLWYISIPIALSCI-P-PQI--MSP-YMLLLTCTSLLLGTTLTLASNHWLTAWMGLEINTLAMIPLMTYPNHSR-STESAIKYFLTQATASMMMMFAIIQNAWATNQW--TLTQMSNNTASILMTLTLAIKLGLAPFHFWVPEVTQGIPLLSGMILLTWQKVAPVSIMYQISPSLNMKILTTL-AILSTLTGGWGGLNQTHLRKILAYSSISHMGWTIIIMPINPNLALLNLFIYIIITTTIFLTLNLAQVTKIKSL---ANLWNKSTPMTMIIMITLMSLGSLPPLTGFMPKWLILQELVNNNNIATATLMAMSTLLNLFFYMRIIYTSTLTMFPTTNNSKLQW-MYAQTKKTTMI-------PPLTVISSMLLPLTPLCLTLFQMMIN-LLITLIVNFMLSTIIILIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLLSLPWALQLPHPNMTLVLSYCLIVLLTAGLAYEWSQKG--LEWTE-MTSINLNLMTAFLLALAGVLMYRSHLMSTLLCLEGMMLSLYIMLSLLISHFHMFSLSMAPLILLVISACEAAGGLALLVKMSNNYGNDYVQNLNLLQCMLKILMPTFMLIPLTWLSKNLWLWTNLTSYSLLIGTFSI-TLLHQDSDLGTNHN-NLFYTDSLSSPLLVLSCWLLPLMMMASQNHLNKESMNRKKAYLTTLIILQLSLITALSASELMMFYIMFETTLIPTLIIITRWGNQNERLNAGLYLLFYTLTGSIPLLIALLFLYNKLGSLHILAMTIMSTTLK-PSY-----SNSILWYACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTVFTQP-LTTNLYYPFIILSLWGMVMTS--FICLRQTDLKSLIAYSSISHMALVIIATLMQSPLSFMGATALMIAHGLTSSMLFGLANTNYERINSRTMILARGLQTILPLTCTWWILATLANLALPPTINFLCELLVITSSFSWSNFSIILLGINTIITALYSLHMLTTTQRGKPTYHTQTIKPTSTREHTLMILHLIPLLTISLSPKFILGLTY------MNNMLNTMTLMSITTLTTPLIIN---LIFPHKT-TKLPMYYKMA-VKYAFLISLPPLLSFIHTGQESIITNWKWFSINSFNLTMSFKLDYFSIIFIPIALYVTWSILEFSQWYMNSDPNIHQFFKYLVMFLLTMMILITANNLFQLFIGWEGVGIMSFMLIGWWHGRSDANTAALQAILYNRIGDMGLMLTMVWLMINIGLWDLQHIFMTKMN---TLALLGLVIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPMMKDNNTILTIILCMGAITSLFAAICATTQNDIKKIVAFSTSSQLG--LMMVTMGLNQPHRTFLHMCTHAFFKATLFLCSGSIIHNLNNEQDIRKMGGLLNILPITSSALMTSSLALIGTPFLTGFYSKDPIIETMNMSYINSWALTTTLITTT-LTAMYSLRMIYFTLLNQPRFIPLLTINENHPNLKNPILRLTLGSIFTGYLLTMNIPTTYMNPTTMPPMLKMSTLLVTITGLLIAMELNSLTNKLA--APPLKHAYNFSIMQGYFTHLLHRLLPLASLQMSQYIATMLMDLNWYEKIGPKNQMNIHTTMSS-YISSTQKGLIKTYFLS---FIISI--PMMMILAT----------------- +>Balaenoptera_acutorostrata_minke_whale +----MNENLFAPFMIPT-MLGIPVITLIIILPSILFPTPN-RLVNNRTISIQQWLTKLTSKQLMSVHSPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNVGMAIPLWAGTVITGFRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGETTLVLMN-TSFLMALITFTILALLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLLTILSMF-LALFMLFQLKISNHSYFP-SPKPM-YTKTQKQ-QTP-W-NTTWTKIYLP-LL---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWTKIHFMIMFLGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFTSKREVLAVDLTTTNLEWLNGCPPPYHTFEEPAFVNP-KYS------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEVNNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLEIFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLSTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIRPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIALGLYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINDAFIDLPTPSNISSWWNFGSLLGLCLIVQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYAHMGAGLYYGSHAFRETWNIGVILLFTIMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAIVHLIFLHETGSNNPTGIPSDMDKIPFHPYYTIKDILGALLLILTLLALTLFAPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAFIPMLHTSKQRSMMFRPFSQSLFWVLVADLLTLTWIGGQPVEHPYMIVGQLASILYFLLILVLMPVASLIENKLM---KW--------MF--------MINILMLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPMLALTLALTMWSPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLTTTQEQLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTAILFLGTYHNPYNPELYTTNLIIKTLLLTTSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI-P-PQT--MNP-FIFILLLTTLILGTMMVITSSHWLLAWIGFEMNMMAFIPIMMKNPSPR-ATEASTKYLLTQANCSALLMMAVIINLMYSGQW--TITKLFNPTASILMTVALAIKLGLAPFHFWVPEVTQGIPLATGMILLTWQKLAPLSILYQIAPSINLHLMLTM-SLLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILLYNPTLTLLNLLIYITMTFTMFMLFIQNSTTTTLSL---SQAWNKTPIITTLTMLTLLSMGGLPPLSGFMPKWMIIQELTKNDILIMPTFMAITALLNLYFYMRLTYSTALTLFPSMNNMKMKW-QFNPTKRATLL-------PTAIVMSTMLLPLTPMLSILL---MN-LLLTLLTNMTLAMLLVFIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQSNNLNTTLTMALFLISLLAASLAYEWTQKG--LEWAE-MTLIHMNIFMAFNMSLVGLLMYRSHLMSALLCLEGMMLSLFVLATLTILSSHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQSLNLLQCMLKFIIPTIMLMPLTWMSKNNMVWINSTTHSLLISFSSL-LLLNQLNDNSLNYS-LIFFSDPLSTPLLILTMWLLPLMLMASQSHLIKEPPIRKKLYITMLVTLQALLIMTFTATELILFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALMYLQNTAGTLNFLLLQHWAQPLS-TSW-----SNIFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSMLNP-LTEHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVIAAILIQTPWSYMGGTALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQVFLPLMATWWLLASLTNLALPPTINLIGELLVVMSIFSWSNPTILLMGTNIVITALYSLYMLIMTQRGKHTHHINNITPSFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLLTSF-ALLTLLILTTPIMMP---NMNSHKD-NKYQSYVKNI-VFCAFITSLIPAMIYLHTNQETLISNWHWITIQTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPHINQFFKYLLLFLITMLILITANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLLASMAWFLFNMNTWDMQQIFMLNQN-PLNFPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPLMENSKSIQTVTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPFTTTALIIGCLALTGMPFLAGFYSKDPIIEAATSSYTNAWALLLTLIATS-LTAVYSTRIIFFTLLGQPRFPPSTIINENNPLLINPIKRLLIGSIFAGFILSNSIPPMTTPLMTMPLHLKLTALTMTTLGFIIAFEINLDTQNLK--YIHPSNSSKFSTLLGYFPTIMHRLPPYFNLLMSQKLATSLLDLIWLETILPKTTALIQLKAST--LTSNQQGLIKLYFLS---FLITI--MLTMTLF----------NYPE---- +>Eschrichtius_robustus_grey_whale +----MNENLFAPFMTPV-MLGIPITTLIIILPSILFPTPN-RLVNNRTISIQQWLTKLTSKQLMNVHNPKGQTWSLMLTSLFLFIASTNLLGMLPHSFTPTTQLSMNVGMAIPLWAGTVATGLRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGETTLVLTS-ISPFTALITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLLTILSML-LTLFVLFQLKISKYSYSP-DPKLT-LTKTQKQ-QTP-W-NTTWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGSLIGDDQIYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWTKIHFMIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFTSKREVLAVDLTSTNLEWLNGCPPPYHTFEEPAFVNP-KWS------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEVNNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLEIFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLSTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPPPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIALGLYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGTTFLIVCFLRQMKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINDAFVDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTTTAFSSITHICRDVNYGWIIRYLHANGASMFFICLYAHMGRGLYYGSHAFRETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSVDKATLTRFFAFHFILPFIILALAIVHLIFLHETGSNNPTGIPSNMDNIPFHPYYTIKDMLGALLLILTLLMLTLFAPDLLGDPDNYTPANPLSTPTHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAFIPMLHTSKQRSMMFRPFSQFLFWVLVADLLTLTWIGGQPVEHPYMIVGQFASILYFLLILVLMPVASLIENKLM---KW--------MF--------MINILMLILPILLAVAFLTLVERKILGYMQLRKGPNIVGPHGLFQPFADAIKLFTKEPLRPATSSTTMFIIAPVLALTLALTMWSPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLATTQEQLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANVIMMNMLTAILFLGTFHNPYNPELYTTNLIIKTLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI-P-PQT--MNP-YIFTILLTTLILSTMMVITSSHWLMAWIGLEMNMMAFIPIMMKTPNPR-ATEASTKYLLTQATASALLMMAIIINLMYSGQW--TITKLFNPTASTLMTVALAIKLGLAPFHFWVPEVTQGIPLTTGLILLTWQKLAPLSILYQISPSINLYLILTM-SLLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILPYNPTLTLLNLLIYITMTFTMFMLFIQNSTTTTLSL---SQAWNKTPIITTLTMLTLLSMGGLPPLSGFMPKWMIIQELTKNDMLIMPTLMAIVALLNLYFYMRLTYATALTLFPSTNNMKMKW-QFNPTKRATLL-------PTAIVISTMLLPLTPMLSILL---MN-LLLTLLTNTTLTLLLAFIAFWLPQLNTYTEKTSPYECGFDPMVSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQSNNLNTMLTMALFLISLLAASLAYEWTQEG--LEWAE-MTLIHMNILMAFSMSLVGLLMYRSHLMSALLCLEGMMLSLFVLAALTILNSHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKNNLIWINSTTHSLLISLSSL-LLLNQLNDNSLNYS-LVFFSDPLSAPLLILTMWLLPLMLMASQSHLAKEPPVRKKLYVTMLIMLQTLLIMTFTAMELILFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALLFLQNTTGSLNFLLLQHWAQPLS-TSW-----SNIFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITPMLGP-LTEHMAYPFLMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFLPLMATWWLLASLTNLALPPTINLIGELLVVMSIFSWSNPTILLMGTNIVITALYSLYMLIMTQRGKHTHHINNITPSFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSF-TLLTLLILITPIMVS---NTNPHKS-NKYQSHVKNV-VFCAFITSLIPAMMYLHTNQETLISNWHWITIQTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLLTSMAWFLSNMNTWDLQQIFMLNQN-PLNLPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLVRFHPLMENNKPIQMMTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPFTTTALIIGCLALTGMPFLTGFYSKDPIIEAATSSYTNAWALLLTLVATS-LTAIYSTRIIFFVLLGQPRFPPSTTINENNPLLINPIKRLLIGSIFAGFILSNSIPPMTTPLMTMPLHLKLTALTMTTLGFIIAFEISLDTQNLK--YTQPSNSSKFSTLLGYFPTIMHRMPPHLNLSMSQKLATSLLDLTWLENILPKTTALIQLKAST--MTSNQQGLIKLYFLS---FLITI--TLSMILF----------NYPE---- +>Hemiechinus_auritus_long-eared_hedgehog +----MNENLFASFIIPT-LMGLPMTILIIMFPSLLFIKHT-RLITNRIMALQQWMIKNITKQMMSIHSIKGQTWTLLLISLIMFIASTNILGLLPHTFTPTAQLSMNLGMAIPLWAGTVILGFRLKLKSSLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGSATLNLIT-IYTSTAMITFIILLLLTILEIAVALIQAYVFTLLVSLYLHDNSMPQLDTSSWFMMILTMI-FTLFIIMQLKISSHKMFI-KPESE-DYIFSSS-SKP-W-EHKWTKIYLP-LL-LSLH----MFISRWLFSTNHKDIGTLYLLFGAWAGMVGTSLSLLIRAELGQPGALMGDDQIYNVVVTAHAFVMIFFMVMPIMLGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGVGTGWTVYPPLAGNMAHAGCSVDLAIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAVLLLLALPVLAAGITMLLTDRNINTTFFDPAGGGDPILYQHLFWFFGHPEVYILNHPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGHINWAPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIGGFIHWFPLLTGYTLNDTWAKIHFIIMFMGVNITFFPQHFLGLAGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFLVWEAFAAKREVFKVEFTNTNIEWLHGCPPSYHTFEEPTYVLA-K--------MAYPLELGLQDATSPIMEELMYFHDHTLMIVFLISSLVLYIISAMLTTKLMHTSTVDAQEIETVWTILPAVILILIALPSLRILYMMDEMNDPSLTMKTMGHQWYWSYEYSDFEDLSFDSYMIPTSDLNPGMFRLLEVDNRVILPTDITARILISSEDVLHSWAIPSLGIKTDAIPGRLNQATLMITRPGLYYGQCSEICGANHSFMPITIEAIPLNQFEKWSLSMI----------MNHQMHAYHMVNPSPWPLTGALSALLMTSGLMMWFHFNSMFLLILGLTTNCLTMYQWWRDIIREGTFQGHHTPIVQKGLRYGMVLFIISEVLFFTGFFWAFYHSSLVPTTELGGYWPPAGVKPLNPLEVPLLNTAVLLASGVSVTWAHHSILEKNRISAIQALTITISLGLYFTLLQAMEYYEAPFTIADSIYGSTFFMATGFHGLHVIIGSSFLIVCLMRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MLNIRKNHSLMKIINNSFIDLPTPSNISSWWNFGSLLGLCLITQIITGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMFFMCLFLHIGRGIYYGSYLFKETWNMGIILLITTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGSFSVDKATLTRFFAFHFILPFMIVALTMVHLLFLHETGSNNPTGIISESDKIPFHPYYTMKDILGMISLLLILMTLTLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILILFFMPLLHTSKQRSMIFRPLSQCTFWLLTSDLLILTWIGSQPVEDPYIIIGQLASILYFLIILFLMPVMGLIENSMF---KW--------ML--------MINILCLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPFGLLQPIADAVKLFTKEPILPVSSSMSLFIMAPILAITLALMLWVPLPMPKSLVNINLSLLFILALSSLAVYSILWSGWASNSKYALIGGLRAVAQTISYEVTLAIILLSLLMFSGSFSLNNLIIAQENLWLFMSTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNALTTILFLAPSNNVFLPEMFTLKLIPLMILMTMMFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYSSLPITLASF-P-PQ---MNP-ILAYFIYYMLVMGTIMVLISSHWLLIWAGFEMNLMAMIPIMLYNQNPR-STESAIKYFMIQTTASIIFMMSVSINLMLTGQW--TVMYINNSMLSTIITISMLMKLGAAPFHLWLPEVAQGLHLNSSMILLTWQKL-PLIYLYSLYSTLNFNIMIIS-ALLSIVLGGWGGLNQTQLRKMMAFSSIAHMGWMMAVLCYNPNIMILNLFIYMIMTITLFMIFKYNSSTNISNL---SLICNKSPITASLLALMFMSLGALPPLTGFLPKWMVAQELIKNNNTMLALIMLMFALISLFFYMRLIYSTSLTMFPSTNNMKMYW-LYANSNNYSFI------TIIFSIMSIMMFPLMPILMNLY---MT-MTIMILTNIILASILMIIAFLLPQLNSYVEKISPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPIPWLMNSLKATTSIMVVIALIMALALSLAYEWMKGG--LEWSE-MSIVYMNVMLAFMIALIGTLLYRHHLMSSLMCLEGMMLAMYIFISLISLNMHFTTMYMVPLIILVFAACEAALGLALLVKMFNYYGNDYVQNLNLLKCMLKMILSTVMLIPLTWLSKNKYMWINITLYSFLIALTSL-TYMNKQHYMMMNTS-ITFFTDNLSTPLLILTTWLLPLMIIASQHHLQKENLTHKKLFISMLILLQILLIMTFTASEMLLFYILFEATLIPTLIIITRWGNQIERLNAGYYFLFYTLVGSLPLLVALLYLKEMNGSMHFIFIKLNTDYYS-NNW-----SNSLLWLSCTMAFLVKMPLYGIHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRINMLTEP-LTNIMYYPFIILSLWGMIMTS--CICLRQTDLKSLIAYSSVSHMALVIAAIMIQTPMSYMGATTLMIAHGLTSSLLFCLANTNYERTHSRTMLLTRGLQIMLPLMTTWWLIASLNNLALPPTINLIGEFLILMSLYSWANFSIILTGFNMMITVLYTLYMIITTQRGLPSHHIKSIKPSFTRENTLMMLHIIPLILLIINPYLILGNTL--------MMVSI-MLTTLVVMNMPLILS---TYPNYNM-QNFPTHVKSA-VKTAFTLSLIPTIIFIMLDQEMVTFNWHWMTIQSTKIFMSFKLDYFSILFLPTALFVTWSILEFSLWYMASDPNINKFFKYLLMFLTTMLILTTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAMLYNRIGDIGFILMMVWLMLNCNSLDIQQIFMTKIN--SNIPLMGLLLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLMIRFHPMLSNNHTILTMTMCLGAMTTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYMAFLHICTHAFFKAMLFMCSGSIIHNMKDEQDIRKMGAIYKTLPLTSTALIIGNMALTGIPFLSGFYSKDLIIEAINTSYTNAWALTMTMMATS-MTAVYSTRMIIMVLLNNPRYNSMLTMNENNINLNNSIKRLMIGSIFAGFMLTHYITPMYVPPMTMPLFMKMMALIITLTGFIVALDLSMMTHHLK--MMHNTHSFMFSNMLGYFTNILHRQPPTLTLKYSQNSSNLLLDQSWYEYNLPMMLMNFHKQMSK--YMSNQNGLIKLYFMS---FFIS---MLIMLIFTF--------SFHE---- +>Ursus_thibetanus_formosanus_Formosan_black_bear +----MNENLFTSFITPM-MMGVPIVVLIVMFPSILFPSPS-RLIDNRLVSIQQWLVRLTSKQMLSIHNRKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVATGFRYKTKASLAHFLPQGTPFPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTITALITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSITILSMV-LALFIMFQLKISKYKYPE-TPEPK-SLSSSKK-LMP-W-EEKWTKIYSP-LL-LPRW----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNPHTTFFDPAGGGVPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFMIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAVVELTSTNIEWLHGCPPPYHTFEEPAYVML-K--------MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISIMLTAKLTHTNTMNAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMTPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLTAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMFLLSLGLTTNMLTMYQWWRDIIRESTFQGHHTPVVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGACWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALLITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFLRQLHFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSLIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDATTAFSSVAHICRDVHYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYLLSETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDALGALLLILALATLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILAIIPLLHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVDHPFTIIGQLASILYFTILLVLMPIAGIIENNLS---KW--------MF--------MINTISLVVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPVADAVKLFTKEPLRPLTSSVTMFIMAPILALTLALTMWIPLPMPYPLVNMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFALSTLITTQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLAEGESELVSGFNVEYAAGPFALFFLAEYTNIIMMNALTTILFFGAFHNPYMPELYTVNFTMKTLLLTASFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIITASI-P-PQM--MKP-PILIIITSTIVLGTMIVLFSSHWLMIWIGFEMNMLANIPILMKKFNPR-AMEASTKYFLTQATASMLLMLGIIINLLHSGHW--TISMIPNPIASTVITIALAMKLGLSPFHFWVPEVTQGVPLSSGMILLTWQKIAPLSVLYQISPSINPNLLVAM-AATSVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMHSLSTTTLSL---SHTWNKLPLIASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYATALTMFPSANNMKMKW-QFESTKKMILL-------PPLIVASTMLLPLTPLLSIMD---MN-LILALFTNMLLASLLVLIAFWLPQLNIYAEKASPYECGFDPVGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDNLMTMLIMALLLISLLAASLAYEWAEKG--LEWAE-MPVVYVNIFLAFIVSLMGLLIYRSHLMSSLLCLEGMMLSLFVMLTVTVLNNHFTLANMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIFPTMMLVPLTWASKPNMIWINTTAYSLLICLISL-TYFNQLSDNSLNFS-LLFFTDSLSAPLLVLTTWLLPLMLMASQSHLSKETLTRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLHTQNNLGTLNFLMMQYWIQPLP-NSW-----SSIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLDP-LTSFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMVAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVVATFSWSNITITLMGANIIITALYSLYMLITTQRGKCTDHIKSIKPSFTRENALMALHLLPLLLLSLNPKVILGPIY------MNLFASS-IITTLLMLTMPIVLT---GASTHKN-KFYPQYVKTT-ISYAFAISTVPMMMFLYSGQEMIISNWHWMTIQTLKLTLSFKLDHFSMIFMPVALFVTWSIMEFSIWYMHTDPNINRFFKYLLMFLITMMVLVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVVYNRIGDVGFIMAMAWFLLNTNAWDFQQIFAIEHD-NLNIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTIQTAALCLGAMTTLFTAACALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKVLPLTTTALIIGTLALTGMPFLTGFYSKDLIIETANTSYTNAWALLVTLVATS-MTAAYSTRIVFFALLGQPRFNPAIIINENNPLLVNSIKRLLLGSIFAGYLISHSITPTTIPQMTMPYYLKTTALAVTMLGFILALELNTTMQSLK--FNYPQNVFKFSNQLGYFPIIIHRFLPMMSLSMSQKMASMLLDTIWLENVLPKSISYFQMKSSI--TVSNQKGLIKLYFLS---FMITL--TLSFLVL----------NFHEWLP- +>Ursus_thibetanus_mupinensis_Asiatic_black_bear +----MNENLFTSFITPT-MMGVPIVVLIVMFPSILFPSPS-RLIDNRLVSIQQWLVWLTSKQMLSIHNRKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVATGFRYKTKASLAHFLPQGTPFPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTS-ISTITALITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSITILSMV-LALFIIFQLKISKYKYPE-TPEPK-SPSPSKK-LMP-W-EEKWTKIYSP-LL-LPRR----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGILLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSSLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPILAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLTTLHGGNIKWSPAMMWTLSFIFLFTMGGLTGIVLANSSLNIVLHDTYYVVTHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFMIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAVVELTSTNIEWLHGCPPPYHTFEEPAYVML-K--------MAHPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISIMLTAKLTHTNTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMTPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWLHFNSMFLLSLGLTTNMLTMYQWWRDIIRESTFQGHHTPVVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGACWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGSRKHMLQALFITISLGVYFTLLQASEYYEASFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFLRQLHFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSLIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDATTAFSSVAHICRDVHYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYLLSETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFIFPFIILALAAVHLLFLHETGSNNPSGITSDSDKIPFHPYYTIKDALGALLLILALATLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILAIIPLLHTSKQRGMMYRPLSQCLYWLLVADLLTLTWIGGQPVEHPFTMIGQLASILYFTILLMLMPIAGIIENNLS---KW--------MF--------MINTISLVVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPVADAVKLFTKEPLRPLTSSATMFIMAPILALTLALTMWIPLPMPYPLVNMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFALSTLITTQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLAEGESELVSGFNVEYAAGPFALFFLAEYTNIIMMNALTTILFFGAFHNPYMPELYTVNFTVKTLLLTASFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIITASI-P-PQM--MKP-PILIIITSTVVLGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMLGIIINLLHSGHW--TVSMIPNPIASTVITIALAMKLGLSPFHFWVPEVTQGVPLSSGMILLTWQKIAPLSVLYQISPSINPNLLVAM-AATSVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMHSLSTTTLSL---SHTWNKLPLIASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYATALTMFPSANNMKMKW-QFESTKKMILL-------PPLIVASTMLLPLTPMLSIMD---MN-LILALFTNMLLASLLVLIAFWLPQLNIYAEKASPYECGFDPVGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDNLMTMLIMALLLISLLAASLAYEWAEKG--LEWAE-MPVVYVNIFLAFIVSLMGLLIYRSHLMSSLLCLEGMMLSLFVMLTVTVLNNHFTLANMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIFPTMMLVPLTWASKPSMIWINTTAYSLLICLISL-TYLNHLGDNSLNFS-LLFFTDSLSAPLLALTTWLLPLMLMASQSHLSKETLTRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLHTQNNLGTLNLLMMQYWIQPLP-NSW-----SSVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLDP-LTSFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMVAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVVATFSWSNITITLMGANIIITALYSLYMLITTQRGKCTDHIKSIKPSFTRENALMALHLLPLLLLSLNPKVILGPIY------MNLFASS-IITTLLMLTVPIILT---SASTHKN-KFYPQYVKTT-ISYAFAVSTVPMMMFLYSGQEMIISNWHWMTIQTLKLTLSFKLDYFSMIFMPVALFVTWSIMEFSIWYMHTDPNINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFIMAMAWFLLNTNAWDFQQIFAIEHD-NLNIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTIQTAALCLGAMTTLFTAACALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKVLPLTTTALIIGTLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLVATS-MTAAYSTRIVFFALLGQPRFNPAIIINENNPLLVNSIKRLLLGSIFAGYLISHNITPTTIPQMTMPYYLKTTALAVTMLGFILALELNSTMQVFK--FNYPQNLFKFSNQLGYFPIIIHRFLPTMSLSMSQKMASMLLDTIWLENVLPKSISYFQMKSSI--TVSNQKGLIKLYFLS---FMITL--TLSFLVL----------NFHE---- +>Balaenoptera_edeni_pygmy_Brydes_whale +----MNENLFAPFMIPM-MLGIPITTLIIILPSILFPTPN-RLINNRTISIQQWLTKLTSKQLMNVHSPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNMGMAIPLWAGTVATGFRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGETTLVLMN-TSLFTALITFTILALLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLLTILSMF-LALFMLFQLKISKHSYSP-SPKLV-FTKTQKQ-QTP-W-NTTWTKIYLP-LL---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWTKIHFMIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFTSKREVLAVDLTSTNLEWLNGCPPPYHTFEEPAFVNP-KWS------MAYPFQLGFQDASSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEVNNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQMTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLETFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMVLLTLGLSTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLVPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIALGLYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNDAFVDLPTPSNISSWWNFGSLLGLCLITQILTGLFLAMHYTPDTTTAFSSVAHICRDVNYGWVIRYLHANGASMFFICLYAHMGRGLYYGSYAFRETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWTWGGFSVDKATLTRFFAFHFILPFIILALAMVHLIFLHETGSNNPTGIPSDMDKIPFHPYYTVKDILGALLLILTLLMLTLFAPDLLGDPDNYTPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILALIPMLHTSKQRSMMFRPFSQFLFWVLVADLLTLTWIGGQPVEHPYVIVGQFASILYFLLILVLMPATSLIENKLM---KW--------MF--------MINILMLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPVLALALALTMWSPLPMPYPLINMNLGVLFMLAMSSLTVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLATTQEQLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMLTAILFLGTFHNPYNSELYTTNLIIKTLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI-P-PQT--MNP-SIFIILLTTLILGTMLVITSSHWLLAWIGFEMNMMAFIPIMMKTPSPR-ATEASTKYLLTQATASALLMMAIIINLMYSGQW--TITKLFNPTASTLMTVALAIKLGLAPFHFWVPEVTQGIPLTTGLILLTWQKLAPLSILYQISPSINLYLMLTM-SLLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILPYNPTLMLLNLLIYIMMTFTMFMLFIQNSTTTTLSL---AQTWNKTPIITTLTMLTLLSMGGLPPLSGFMPKWMIIQELTKNDLLIMPTFMAITALLNLYFYMRLTYSTALTLFPSTNNMKMKW-QFYPTKRATLL-------PTAIVISTMLLPLTPMLSILL---MN-LLLTLLTNTMLALLLMFIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQSNNLNTTLTMALFLISLLAASLAYEWTQEG--LEWAE-MTLIHMNVLMAFSMSLVGLLMYRSHLMSALLCLEGMMLSLFTLAALTILNSHFTLANIMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQSLNLLQCMLKFIIPTIMLMPLTWLSKNNLIWINSTVHSLLISFSSL-LLLNQLNDNSLNYS-LIFFSDPLSTPLLMLTMWLLPLMLMASQSHLTKEPPVRKKLYITMLITLQALLIMTFTATELILFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALVYLQNTTGSLNFLLLQHWAEPLS-TSW-----SNIFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSMLNP-LTEHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQVFLPLMATWWLLASLTNLALPPTINLIGELLVVMSIFSWSNPTILLMGMNIVITALYTLYMLIMTQRGKHTHHINNITPSFTREHTLMALHIIPLLLLSLNPKIILGPLY------MNLFTSF-TLLTLLILFTPIMMS---NTDPHKN-NKYQSYVKNT-VFCAFITSLIPAMMYLHTNQEALISNWHWITIQTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLLASMAWFLSNMNTWDLQQIFMLNQN-PLNFPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPLMENNSLVQTVTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPFTTTALIIGCLALTGMPFLTGFYSKDPIIEAATSSYTNAWALLLTLTATS-LTAVYSTRIIFFTLLGQPRFPPSMTINENNPLLINPIKRLLIGSIFAGFILSNSIPPTTTPLMTMPLHLKLTALVMTTLGFIIAFEINLDTQNLK--YTHPSNSSKFSTLLGYFPTTMHRLPPHLDLLMSQKLATSLLDLAWLETILPKTTALIQLKAST--LTSNQQGLIKLYFLS---FLITI--TLSMILF----------NYPE---- +>Rhinolophus_ferrumequinum_quelpartis_ +----MNENLFASFITPT-MMGLPIVILIIVFPTILFPSTN-RLINNRLIAIQQWLIHMTSKQMMAIHNPKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALLS-ISTATALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITIVSMI-LALFITMQLKVSKHYFHS-NPEPL-EVKSSKH-TTP-W-ETKWTKIYSP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGSLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLDTTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMVFMVWEAFASKREVSTVELTTTNLEWMHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTSLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSSSMV----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSALLLTLGLLANMLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRSHMLQALFITIFLGLYFTLLQASEYHETSFTIADGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLFKIINDSFVDLPAPSSISSWWNFGSLLGICLAIQILTGLFLAMHYTSDTATAFHSVTHICRDVNYGWVLRYLHANGASMFFICLFLHVGRGIYYGSYTFSETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTTLVEWVWGGFSVDKATLTRFFALHFLLPFIIAAMVMVHLLFLHETGSNNPTGIPSDADMIPFHPYYTIKDILGLVLMLMALLSLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAAIPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPLASIAENHLL---KW--------MF--------MINLLLLIIPILLAVAFLTLIERKVLGYMQFRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSISMFIIAPVLALTLALTMWTPLPMPHPLINLNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLLNGSFSLSTLIITQEHTWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNIFTTTLFLGAYHNPIMPELYTTNFVLKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTMPVITAGI-P-PQT--MNP-LIFTMISFTIILGTLIVMTSSHWLLIWIGFEMNMLAIIPMMMKRSNPR-STEASTKYFLTQATASMLLMLAIIINLFHSGQW--TVTNIPSPTASVIMTLALTMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSVLYQISHSINLDILLTM-SILSILVGGWGGLNQTQLRKILAYSSIAHMGWMTTIMAYNPTMALLNLILYILMTTTTFMLFMTNASTTTLSL---SHLWNKMPMLATSILVIMLSLGGLPPLTGFLPKWMIIQELTKNDSIILPTLMAITALLNLYFYMRLTYTTSLTMFPSTNNMKIKW-QFENTKWTTLL-------PPMIILSTLTLPLAPMLSTLN---MN-FMLTLLTNTLLALLLVTIAFWLPQTNVYSEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLKIMLTTSLLLISLLAISLAYEWSQKG--LEWTE-MALIYMNTMLAFTMSLLGLLLYRSHLMSSLLCLEGMMLSMFVMVTVMILNTHLMTSSMMPIVLLVFAACEAALGLSLLVMVSNTYGVDHVQNLNLLQCMLKIIIPTTMLIPLVWLSKHTMIWINPTMYSLMISLLSL-PMLNQFTDNSLNPS-LVFFSDSLSTPLLMLTTWLLPLMLIASQHHLSKEPLNQKKLFMTMLILLQVFLIMTFTATELILFYILFEATLLPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTTGTLNFLLSTYWLQPLS-PSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMLLNP-ITDFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTILPLMAAWWLLASLTNLALPPTINLIGELFVVMSTFSWSSMSIILMGTNIVITALYSLYMLITTQRGKHTYHINNLTPSFTRENTLMAMHLTPLLLLSINPKIILGALY------MNLLTPT-ILTTLLILTIPIITA---TLNLHKI-STYPYYVKTT-IVWAFSISLIPTMIFIQSGQEVILMNWHWLSIQTLKISMSFKLDYFSMIFMPVALFVTWSIMEFSLWYMHLDPYIDRFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFLVAMAWFLFNTNTWDLQQIFSLNLN-NTNFPLAGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLIENNKTIQSMVLCMGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLYKTLPFTTTALTVGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLITLIATS-LTAVYSTRIIFFALLGQPRFPTLILINENNPYLMNSIKRLLIGSIFAGFFITNTIPTMTVPQMTMPWYLKMTALAVTILGFTIALDLSSATQNLK--FKYPSASFKFSNLLGYFPTVMHRSMPLTNLSLSQKTASLLLDLTWMENILPKSISMLQMKTST--LVSSQKGQIKLYFLS---FLLTL--TLSLIVL----------ILHE---- +>Phascogale_tapoatafa_brush-tailed_phascogale +----MNENLFAPFICPT-IMGISTLPIIMLFPCLIFSTPK-RWLPNRIQILQVWLIRLITKQMMLMHNNIGRTWALMLMTLILFIATTNLLGLLPYSFTPTTQLSMNISMAIPLWMGTVILGFRNKPKASLAHFLPQGTPTPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSAALALMS-INIFLSSITLIILFLLTILELAVALIQAYVFTLLVSLYLHDNSMPQLETSAWFHVAGLTI-INIFCLFQLQLIGIEMIYIYPPEE-ILKLPEI-PFP-W-EKKWTKIYLP-LS-SVLLL---MFITRWFFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYAGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDMWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNILSSIGSFISLTAVILMIFIIWEAFASKREVSSVELTTTNIEWLYGCPPPYHTFEQPVFIKS----------MPYPMQLGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYVLILMLTTKLTHTSTMDAQEVETIWTIMPAIILVLIALPSLRILYMMDEIFNPYLTVKAMGHQWYWSYEYTDYEDLTFDSYMIPTQDLTPGQLRLLEVDNRMVLPMELPIRMLISSEDVLHAWTIPSLGLKADAIPGRLNQATLTSTRPGIYYGQCSEICGSNHSFMPIVLEVATLKYFENWSHMMQ----------MTHQTHAYHMVNPSPWPLTGALSAFLLTSGMIMWFHFHSILLLLMGLISMLLTMYQWWRDIVREGTFQGHHTPVVQKGLRYGMILFITSEVFFFIGFFWAFYHSSLSPALELGGCWPPMGIKPLNPLEVPLLNTAILLASGVSITWAHHSLMEGNRKQMIQALSTTIALGLYFTTLQAMEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSLFLVVCLLRQLFYHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKTHPLMKIINHSFIDLPAPSNISAWWNFGSLLGICLMIQILTGFFLAMHYTSDTLTAFTSVAHICRDVNYGWLLRNLHANGASMFFMCLFLHVGRGIYYGSYLYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLAEWIWGGFAVDKATLTRFFAFHFILPFLVTALAIVHLLFLHETGSNNPSGINPDSDKIPFHPYYTIKDALGATLLLLVLLLLALFSPDSLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLIIPLLHTANQRSMMFRPISQILFWTLTADLITLTWIGGQPVEQPFIVIGQLASMLYFLLILVLMPLAGLFENHMLK-PKW--------MF--------MLNLLLYIIPILLAVAFLTLLERKVLGYMQFRKGPNVVGPYGLLQPFADAIKLFTKEPLRPLTSSISMFIIAPILALSIALTIWTPLPMPNTLLDLNLGLIFVLSLSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVSLAIILLSVMLINGSFTLKTLSLTQENWWLIITTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIAMNAITTILFLGPSLNPNLTHLNSISFMLKTLLLTILFLWVRASYPRFRYDQLMHLLWKNFLPMTLALCMWFISLPIALSCV-P-PQM--MSP-YVLIILTLSLFIGTCLTLFSNHWFTAWMGLEINTLAVIPLMTAPNNPR-ATEAATKYFLTQATASMMMMFAIICNAWSTNQW--TLFQLSDHWASILMTLALSIKLGLAPFHFWVPEVTQGIPLLTGMILLTWQKIAPTSILFQIAPCLNMKILIMF-AILSAILGGWGGLNQTHLRKILAYSSIAHMGWMVVVVHINPAMTILNLTVYIMATISTFMTLNLSNTTKVKAL---GGLWNKSAPVTIIILLTLLSLGGLPPLTGFMPKWLILQELVANGNFIVATTMALTALLNLFFYMRIIYASSLTMFPSTNNSKIQW-YYNSMQPTTLI-------STTTIISSMLLPLTPLFISLS--MMN-LILTLMTNSILATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAVQLSTTNTTLALAYSLIILLTGGLAYEWFQKG--LEWTE-MLPIHLNLTVAFFLALAGVLIYRSHLMSTLLCLEGMMLSLFILMALMITHFQVFSVSMIPLILLVFSACEAGVGLALLVKISTTHGNDYIQNLNLLQCMLKILTTTFMLLPLTWYSKKSWLWINTTTHSFLISLWSL-TLLYHHSDLGTNYN-TSFSLDPLSSPLLVLSCWLLPLMIMASQNHLSHEPLLRKKTYLTMLIILQLSLIMAFASSELIMFYILFETTLIPTLIIITRWGSQNERLNAGLYFLFYTLVGSLPLLVALLHLHNNLGSLHMLTMSLISPTLD-TSM-----SASLLWYACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITAFTEP-ATSTLCYPFMILSLWGMIMTS--SVCLRQTDLKSLIAYSSVSHMGLVIVAALMQSPLGFMGATVLMIAHGLTSSMLFCLANTNYERIHSRTLLLTRGLQMILPLMCAWWLLASLANLAQPPTINLLGELMVIMTTFSWSNFSLILLGINTVITALYSLHMFITSQRGKFTHHMTPIKPTLTREHMLMALHLLPLLIMSINPKFILGPTY------MNQLLNTLMLLTIITLIMPLINN---IMLPHKT-NNFPLMCKNS-VKLAFFTSLLPLLLFIYSGQEATITNWQWFPINTFNLSMSFKLDYFSIIFIPIALYVTWSILEFSMWYMHADPHIHRFFKYLIIFLFTMIILVSANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFMLSMACLMINSNSWDIQHIFMTDVS---TLTLLGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFNPLMENNHTALTTMLCLGSITTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTLGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLLHLLPITSSAIILGSLALTGTPFLAGFYSKDSIIEAMNTSYVNTWALSLTMVATM-LTAVYSMRILHFSLLKEPRFLPLLPLNESDPNLINPITRLALGSIFAGFMLTMNIPPTSMIPMTMPTSMKLSALMMTILGVLIAMELNTLTNKMP--MKPLMHSHNFSNMLGYFTHIFHRLNPLMSLQMGQHIATMLIDMSWYEKTGPKSQANLHATMAS-TIATTQKGLIKLYFLS---FMISM--TLILLIM------------------ +>Mustela_altaica_mountain_weasel +----MNENLFSSFATPT-MMGLPIVILITMFPSIMFPSPN-RLINNRLVSVQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTITAMITFTILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-MTLFFMFQLKVSKYSFPE-NPEPK-LVAMSKP-STP-W-ENKWTKIYFP-HS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMLGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGSINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDVWAKIHFTIMFVGVNTTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVLTVELTSTNIEWLHGCPPPYHTFEEPTYVLS-K--------MAYPFQMGLQDAASPIMEELLHFHDHTLMIVFLISSLVLYIISVMLTTKLTHTSTMDAQAVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTIMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLTTSGLVMWFHYNSLSLLTLGTTANMLTMYQWWRDVVREGTFQGHHTPTVQKGLRYGMILFITSELFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITISLGLYFTMLQASEYYEAPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLTKIINNSFIDLPAPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYMFSETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALFLILTLMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILVLAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFMILLVLMPIISIIENNML---KW--------MF--------MINIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFVVAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHTPYLPELYSINFTMKTLLLTISFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASI-P-PLT--MKP-PILTIIMFTVISGTIMVLMSSHWLTIWIGFEMNMLAIVPILMKKFNPR-AVEAATKYFLTQATASMLLMLGIIVNLLLTGQW--TVLNTLNPIVSNMMTVALSMKLGLSPFHFWVPEVTQGIPLTSGMILLTWQKIAPLSILYQMSSSMNPHLLMTM-AFMSILIGGWGGLNQTQLRKILAYSSIAHMGWMIAVTTYNPTLMLLNLTIYIMMTLGTFMLFMLSSSTTTLSL---SIMWNKLPLITSLILIIMLSLGGLPPLSGFVPKWMIIHELTKNNMIPAAMLMTITALLNLYFYMRLTYATALTMFPSTNNMKMKW-QFESTKNMTLL-------PPLIVISTMLLPLTPMVLTLL---MN-MMLTMLINVSLASLLIMIAFWLPQLNIYTEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSINLKTTLTMALALISLLAASLAYEWTEEG--LEWNE-MSVVYINIFLAFTLSFMGLLIYRSHLMSSLLCLEGMMLSLFVMMTITILTNHFTLASMTPIILLVFAACEAALGLSLLVMISTTYGTDYVQNLNLLQCMLKIIIPTMMLIPLTWLSKPNMIWINTTAYSMLISLISL-TYLNQFTDNNLNFS-LLFFADSLSTPLLVLTTWLLPLMLMASQHHLSKETLTRKKLYITMLVMLQLFLIMTFTATELIMFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLWLQNNLGTLNLLVIQFWAQPLP-NSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMLLNP-LTSYMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAVLIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLVGELFVVMASFSWSNITIILMGVNIIITALYSLYMLITTQRGKYTHHIKNIKPSFTRENSLMALHLLPLLLLSLNPKIILGSIY---MKVINLFTSA-MLVTLLMLTFPIMMT---STTMYTN-KSYPQYVKTT-ISYAFMISLIPTMVFIHFGQDTMISNWHWITIQTMKLSLSFKLDYFSMMFMPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGLILAMAWFLTNLNTWDLQQIFMTNHE-NLTIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKMIQTITLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLLTLVATS-MTAAYSTRIMFFALLGQPRFNPIITINENNPLLINSIKRLLFGSIFAGFLISHNLTPTTTPQMTMPHYLKMMALAVTILGFILALELNLMMQGLK--FKYPSNLFKFSNMLGYFPTIIHRLMPKTNLLMSQKSASTLLDMIWLEKILPKSISHFQVKSSI--TISSQKGLIKLYFMS---FMLTL--ALSLLAL----------NFHE---- +>Bos_indicus_zebu_cattle +----MNENLFASFITPV-ILGLPLVTLIVLFPSLLFPTSN-RLVSNRFVTLQQWMLQLVSKQMMSIHNSKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFTILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKISKHNFYH-NPELT-PTKMLKQ-NTP-W-EAKWTKIYLP-LL-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMTLLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITITLGIYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMAIAMVHLLFLHETGSNNPTGISSDVDKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILALIPLLHTSKQRSMMFRPLSQCLFWALVADLLTLTWIGGQPVEHPYITIGQLASILYFLLILVLMPTAGTVENKLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSASMFILAPIMALGLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLIITQEQMWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTAILFLGTSHNPHMPELYTINFTIKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILTSGI-P-PQT--MNP-IIFIIILLTIMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKNHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNLILTL-SVLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTMFMANSTTTTLSL---SHTWNKTPIMTVLILATLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFPLMKKMTFL-------PTMVVLSTMMLPLTPMLSVLE---MN-LMLALLTNFTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIILLAVSLAYEWTQKG--LEWTE-MSMVYMNIMMAFTVSLVGLLMYRSHLMSSLLCLEGMMLSLFVMAALTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWLSKNSMIWVNSTAHSLLISFTSL-LLMNQFGDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVH-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNP-MTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVNMVITALYSLYMLIMTQRGKYTYHINNISPSFTRENALMSLHILPLLLLTLNPKIILGPLY------MNMFSSL-SLVTLLLLTMPIMMM---SLNTYKP-SNYPLYVKTA-ISYAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPS-DSNMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLVSINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQMTMPYYLKTTALIVTILGFILALEISNTTKNLK--YHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKAST--LVTNQKGLIKLYFLS---FLITI--LISMMLF----------NFHE---- +>Anolis_carolinensis_green_anole +----MMLSFFDQFSIPT-VLGIPLIFVATIFPALLIVMNNSRLVLNRLSTLLEWSMKLFSKQLMLPINLPGHKWTALLLTLMMTLSSLNMLGLLPYTFTPTTQLSFNMALAVPMWLATVMIGLRNQPTISLGHLLPEGTPLMLIPILIIIETISLFIRPLALGVRLTANITAGHLLIQLISTATFVLLP-MMTMTATITFIVLLLLTGLEIAVALIQAYVFVLLLSLYLQENVMPQLNPSPWLMIFFLIW-LFLTLVLFNKALKPMFPN-TTETK---EMTKPAPQP-W-NWPWY-----------------MFLNRWLFSTNHKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLASNLAHAGASVDLTIFSLHLAGVSSILGAINFITTCINMKPSTMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTSFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYAGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGMIKWDAAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFSLHQAWTKAQFGVMFAGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNAISSIGSLISLVAVIMMMFIIWEAFASKREICSLELASTNLEWLHGCPPPYHTYEEPTFVQP-S--------MAHPSQLGFQDAASPIMEELLHFHDHALMIVFLISALVLYTITIMMTTALTHTNTMDAQEVEMIWTILPAIILILIALPSLRILYLMDEINNPHLTIKTMGHQWYWSYEYTDYQDLEFDSYMLPTTDLDKGTTRLLEVDNRMVIPMESPIRMLISAQDVLHSWAVPALGIKTDAIPGRLNQTTFITSHPGMFYGQCSEICGSNHSFMPIVVESVPLNAFENWTTTLLTS--------MTHQAHAYHMVDPSPWPVTGAIAALLMTSGLAVWFHFSNLILMNLGLIVLFLTMLQWWRDIIREGTFQGHHTTPVQKGLRYGMILFITSEVFFFIGFFWAFYHSSLAPTPELGGCWPPSGIDPLNPFEVPLLNTAVLLASGVTVTWAHHSIMEKARKEASQALALTVLFGLYFTALQVMEYYEAPFAISDSVYGTTFFVATGFHGLHVIIGTLFLTVCFIRQTYFHFTAEHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTIMRKTHPMFKIINGSFIDLPTPSNISAWWNFGSLLGVCLVIQILTGLFLAMHYTADILSAFSSVAHISRDVQYGWLIRNTHANGASMFFICIYLHIGRGLYYGSYMFKETWNLGVVLLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGTLMVEWIWGGFSVDNATLTRFFAFHFLLPFMVAGVSIIHLLFLHETGSNNPTGLQSNSDKIPFHPYFSYKDLLGIVLMLMLLLTLALFYPNLLGDPENFSPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVIALLMSILILIFIPMLHTSKQRSNTFRPMSQLMFWALIANIIILTWIGGQPVEHPFIIIGQVASITYFMIFIFILPTLAIMENKLL---KW--------MT--HFLNN-IINPLLYIIPILLAVAFLTLLERKILGYMQLRKGPNIVGPQGLLQPVADGVKLFIKEPVRPSTSSPTLFIFTPTLALFLALAIWTPIPMPLPLADLNLALLFILAMSSMAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGLILLAVVLMSGSFSLKSILLAQEYTPLLLSSWPLMMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNTLSCVLFLSLGQTNM--QTFTPLLMTKVIVLTIGFLWVRASYPRFRYDQLMQLLWKQFLPLTLALCLWHTTILTSMFFI-P-PQ---MSP-TIYMIILSTLATGTIITMTSYHWLMAWVGLELNTLAIIPIISTMHHPR-STEAATKYFLTQAAASALILFSSMTNAWNTGSW--DITQPLTSPSHILLTMALAMKLGLAPLHFWLPEVIQGSTMTTAFIITTWQKIAPMSLIFLTMNNLSTSVFLLM-GLLSSLVGGWGGLNQTQTRKIMAYSSIAHLGWMATISSIMTNILIMNLLIYLIMTTSVFLSLIISKSKTIQDT---TSTWTLSPTLTIIMLLSLLSLGGLPPLTGFIPKWLIMEELILQNFNLLISMMAMSSLLSLYFYLRLTYTTALTLSPNTTQTKFKW-RFYPNTSTMFI-------ITPATISIFLLPMTPLILL-----MN-LSSMILITMTISIVLIIISFWLPQLNSDTEKLSPYECGFDPLGNARLPFSLRFFLVAILFLLFDLEIALLLPLPWAINLGSPLQTSTLTSAILVLLTLGLVYEWLQGG--LEWAE-MTPTNLLMYSTFSLSIFGLSMHRSHLVSALLCIEGMMLALFITSATLLSTTQTTSLAATPIILLTFSACEAGTGLALLVATARTHGNDHLQNLNLLQCMLKIILPTILLTPTAFIIKPSILFSSYLSFSLLIALTSL-TWLNYPATTPQYFT-DLMMVDRISAPLLTLTCWLLPLMVMASQNHLNQEPLHRKRTFLILISILQALLIFTFSTTNLILFYIMFEATLIPTLVVITRWGNQAERLTAGTYFLFYTLASSLPLLIAILFINFKNNLSSTMVLQMIQPQMM-ETA-----SNSLLWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRMTTILHP-QPLNLFYPFLILSLWGIVMTS--SICMRQTDLKSLIAYSSVSHMGLVISACLIQTPWANTGAMLLMIAHGLTSSMLFCLANTSYERTHSRTMVLARGLQLVFPLMTTWWLLANLTNMALPPSINLMGELLIITSLFNWSMTTIILTGTGTLITAIYTLNMFLTTQRNKLPNHLMTNTPNHTREHLLMILHAAPLLLLILNPSLI--------MH-NTIFFSS-MLSTLFIIILPAMKSM-----LNKT-PPTPNKMKQA-VQLAFMISLIPLLLFINNGMEATLTNFSLLSINNFNIKLSFMLDSYSLMFMPIALFVTWSILEFSLWYMALDPHITRFFKYLLTFLLAMLTLVTANSLFQFFIGWEGVGIMSFLLIGWWFSRADANSSALQAIIYNRIGDIGLILMISWSAMNLSTWQINDLFSLDTS--HMIPSIGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRLHPTLEKHQLLLTMCLCLGAITTVFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPQLAFFHISTHAFFKAMLFLCSGSIIHSLANEQDIRMMGGVKNYLPITSSCLTIGSLALMGTPFLSGFYSKDTIIETMNNSHLNAWALSMTILATM-LTAAYSLRMVFYVQMNSPRHKALSPINENSKTLINPITRLALGSLVAGLLIMTATLPSKTLLMTMPTMMKLLALIITILGIIITMDTMNWTTTLP--MKTPNFNFYLSNQLLFF-NIFHRSLPMKALKFSQSMATMTNDLLWSEKAGPKGMTMMQLPMTN--LASSQKSLMKNYLTT---FIITT--LLTMILLT----------------- +>Nectogale_elegans_Elegant_water_shrew +----MNENLFASFATPT-MMGLPIVILIIMFPSIMFPNPS-RLINNRLVTLQQWLIQLTSKQMMMIHNQKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLMS-ISPITAFITFIILVMLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISML-LTLFILFQLKVSKYLYPT-NPELK-SLKMLKH-NNP-W-ETKWTKTYLP-LS-LPQQ----MFVTRWLFSTNHKDIGTLYMIFGAWAGMAGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMLGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGSINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIAAFVHWFPLFTGYTLSSTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNTVSSMGSFISLTAVVLMVFMVWEAFASKREVTSVELTTTNIEWLYGCPPPFHTFEEPVYVNS-K--------MAYPFQMGLQDATSPIMEELMNFHDHALMIVFLISTLVLYIISSMLTTKLTHTSTMDAQAVETIWTILPAIILIMIALPSLRILYMMDEINNPTLTVKTVGHQWYWSYEYTDYDELNFDSYMIPTTDLKPGDLRLLEVDNRAVLPMEMTVRVLITSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICGSNHSFMPIVLELVPLKVFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSTILLSLGLLTNTLTMYQWWRDVVREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTHELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQALFITIALGIYFTVLQAAEYYEAPFTISDGIYGSTFFMATGFHGFHVIVGSTFLMVCFLRQLKYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MVNIRKTHPLMKIINNSFIDLPAPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAGVHLLFLHETGSNNPTGISSDTDKIPFHPYYTIKDILGALLLILILMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLAIIPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPFIIIGQLASILYFLLILVLMPITSLLENNLL---KW--------MF--------MINLLMMIVPILLAVAFLTLIERKVLGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFILAPILALTLALTMWIPLPMPHPLINMNLGVLFMLAVSSLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQKYSWLLLSTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFLGSFHMINLPELYSINFTTKALLLTISFLWVRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSMPIFTSSI-P-PQT--MNP-IILIMIMATIMLGTLIVLTSSHWFMIWIGFEMNMLAIIPMLMKNYNPR-SMEASTKYFMTQATASMILMLAIIMNLLFSGQW--TITNITNSTASMLMTMALVMKLGLSPFHFWMPEVTQGIPLSSGLILLTWQKIAPLSVLYQIFPSINPNMLLTM-SILSLIVGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMIYNPNLMLLNLTVYMAMTISTFMLFMYSSSTTTLSL---SFTWNKTPMITILILMTMLSLGGLPPLTGFLPKWMIIQEMTKNDSVILPTTMAILSLLNLFFYMRLTYSTSLTMFPTTNNMKMKW-QYENMKQIPLM-------APMIVISTLTLPLTPLLITLY---MN-MVLALLTNITLASILVMVAFWLPQLNIYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTQLNAMITMALTLITLLAMSLAYEWLQKG--LEWTE-MSLVHMNIWLAFMVAFLGLLMYRSHLMSSLLCLEGMMLTLFIMMTIMMLNMHFTLANMLPIILLVFAACEAAIGLSLLVMVSNTYGVDYVQNLNLLQCMLKIIMPTIMLIPLTWLSNKNFMWINTTMYAMLISLTTL-PLFYQPNNNDLYFS-LTFFSDPLSSPLLTLTTWLLPLMLMASQNHLMNETETRKKSYISMLILLQIFLIMTFSATELIMFYILFEATLVPTLILITRWGNQTERLNAGLYFLFYTLVGSLPLLVVLLFIQNTSGTLNFTTMQLWAQAVP-NSW-----SNNFLWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITIFLDP-ITETMAYPFLLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATTLMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTVLPLMTTWWLLASLTNLALPPTINLIGELLIMLSSFSWSNFTMILMGINVVITALYSLYMLIMTQRGKYSYHVNSIKPSFTRENSLMALHMIPLLLLSLNPKLILGMLY------MNLYTSA-LVTSLFMLTLPVFMS---LTPIYNT-NQYPYYVKTT-ISYAFFTSLVPTLIFINLGHEAIISNWHWMTIQTVKLSLNFKLDYFAMLFIPVALFVTWSIMEFSMWYMHSDPYMNRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFILSMAWFLLNSNSWELQQIFMLNLS-DSSIPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLIENNKMMQSLILCMGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFHALPFTTTSLIVGSLALTGTPFLTGFYSKDLIIEAANTSYTNAWALLITLIATS-LTAVYSTRILYFSLLGQPRYPTLILINENNPPLINSIKRLLIGSIFAGFIISFNLTPMTTPQMTMPTYLKVTALAVTLTGFILALELNLMTQKFT--LSHPQNYFKFSNMLGFFPIVIHRLLPSTSLLMSQKFSSMLLDLAWMENILPKSISKFQALSSI--TVSNQKGLIKLYFLS---FLITL--TISILLF----------NFHV---- +>Cervus_nippon_yakushimae_Yakushima_sika_deer +----MNENLFASFITPM-ILGLPLATLIVMFPSLLFPTSN-RLVNNRLISLQQWMLQLVSKQMMGIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGAALALMS-ISTMMALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LALFIIFQLKISKHNFHF-NPELM-STKTQKQ-NTP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPYLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMLLLTLGLTTNMLTMYQWWQDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGILLLVLFLMSLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIIIGQLASVLYFFIILVLMPITSTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPVLPELYTINFIMKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFTSSI-P-PQT--MNP-IIFILILSTMMMGTIIVMISSHWLLVWVGFEMNMLAIIPIMMKKHNPR-ATEAATKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPVASMFMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTILILITLLSMGGLPPLSGFMPKWMIIQELTKNDSLILPTIMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSILE---MN-LMLALLTNFTLASLLVTIAFWLPQLNVYSEKTSPYKCGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVALAGLLMYRSHLMSSLLCLEGMMLSLFVMASLTILSSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTHGLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNITGSLNFLVLQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGSLY------MNLFSSF-TLVTLLLLTIPIMAT---SSDNYKT-SNYPLYVKTT-ISYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFALTPN-NSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSTLLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPFLMSSIKRLMIGSLFAGFIISNNIPPTTIPQLTMPYYLKTMALMVTILGFILALEISNMTQNLK--FNYPTNTFKFSNMLGYFPTIMHRLAPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQTKMSI--MVTNQKGLIKLYFLS---FLITI--TISMVLF----------NFHE---- +>Micronycteris_megalotis_little_big-eared_bat +----MNENLFASFITPT-MMGLPIVMLIIMFPTITFPSTN-RLINNRLVAIQQWLIHLTSKQMLSIHNRKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSTNLAMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLALIPMLVVIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISMTTAFITFVILVLLTILEFAVALIQAYVFTLLVSLYLHDNAMPQLDTSTWFITIVSTI-LTLFIIMQLKVSSHNFYS-TPEPK-TTKTSKS-STP-W-ETKWTKIYSP-LS-LPLR----MFITRWLFSTNHKDIGTLYMLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGVGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLSTTWAKIHFLVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMVWEAFAAKREVSIVELTATNLEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISSMLTTNLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPSMTIKTMGHQWYWSYEYTDYTDLCFDSYMIPTPDLKAGELRLLEVDNRVVLPMETTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICGSNHSFMPIVLETVPLEYFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHYNSTTLLALGLLTNTLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLNPLDVPLLNTSVLLASGVSITWAHHSLMEGNRKHMVQSLFITICLGLYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKILNDSLVDLPAPSSLTSWWNFGSLLGVCLGVQILTGLFLAMHYTSDTATAFNSVTHICRDVNYGWILRYLHANGASMFFICLYLHVGRGLYYGSYTYTETWNVGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFLLPFIIAALVMVHLLFLHETGSNNPTGIPSDLDMIPFHPYYTIKDILGLLIMLTALSTLVLFSPDLLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLAIVPMLHTSKQQSMIFRPLSQCLFWLLVADLLTLTWIGGQPVEHPYVIIGQAASILYFSIILIFMPLIGTMENHLL---KW--------MF--------LINLLSLIVPVLLAVAFLTLVERKILGYMQLRKGPNVVGPHGLLQPIADAVKLFTKEPLRPLTSSITMFIMAPILALTLALTMWIPLPMPNPLINMNLSVLFMLAMSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFSLSTLITTQEFTWLILPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTTILFLGAYNNPTFSELYTTNFAIKALLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPIITAGI-P-PQT--MNP-IIFSMIMSTVMMGTVIVMTSSHWLTVWIGFEMNMLAIIPMLMKNHHPR-STEAATKYFLTQATASMLLMLAVLINLLYSGQW--SITSMNNPMASTILTLALTMKLGLSPFHFWVPEVTQGIPLTSGLLLLTWQKLAPLSILYNISPNINLDMLLTM-SILSVIIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILTYNPTMTILNLTVYITMTLTVFMLLILTSTTTTLSL---SHMWNKLPLIPTIILTTMLSLGGLPPLTGFMPKWMIIQELTKNDSIILPTLMAITALLNLYFYMRLTYATSLTMLPTTNNTKIKW-HFESTKQTPCL-------PPLIIISTMLLPLTPMMMILN---MN-MAITLLTNTLLASILVTIAFWLPQMNTYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLETMLLLSLALITLLAASLAYEWSQEG--LEWSE-MSLTYMNMFLAFTISLTGLLMYRSHIMSSLLCLEGMMLSLFVIMTITILNTHYTMASMLPIILLVFAACEAALGLSLLVMVSNTYGMDYVQNLNLLQCMLKIIMPTIMLIPLTWLSQPKMIWINSTTYSLMISMLCL-PLINQATDNSLNMS-PMFFSDPLSTPLLMLTTWLLPLMIIASQFHLANESITQKKLYITMLILLQTFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQAERLNAGLYFLFYTLVGSLPLLVALVYIQNMTGSLNFLLMQYWAKPLL-TSW-----GSTILWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITILLNP-LTEFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANTNYERVHSRTMILARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVVVSSFSWSNLSIILMGLNITITALYTLYMLIMTQRGKHTHHINNLKPSYTRENTLMAMHMLPLLLLSINPKIILGALY------MNLFSAS-MLMSLIMLITPILST---TFNAHKH-PNYPNYVKTM-VSYSFMISMIPTIMFIYSGQEMVISNWHWTTIQTLKLSLSFKLDFFSMLFMPVALFVTWSILEFSMWYMHSDPNINRFFKYLLTFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILSMAWFLANFNTWELQQIFTFNSN-ITTLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNSAIQTATLCLGAMTTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKTMPFTTTAMTVGSLALTGMPFLTGFYSKDLIIEAANTSYINAWALLLTLLATT-LTAVYSTRIIFFALLGQPRLLTLITINENNPLLMNAIKRLLVGSIFAGFLISNNIPPTNILPMTMPSYLKLTALVVTLTGFILALELNSTMLNLK--LTSPTYPFKFSNLLGYFPTIIHRLAPMANLTTSQKSASLLLDLTWLETSLPKTISHFQLKSSS--LVSTQKGLIKLYFLS---FLVTL--TLALTLF----------SPHA---- +>Equus_burchellii_chapmani_Chapmans_zebra +----MNENLFTSFATPT-MMGLPIVILIIMFPSILFPSSN-RLINNRLISIQQWLVQLTSKQMMAIHNNKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVFMGFRHKTKAALAHFLPQGTPIFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISPSTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFINIVSMI-LTLFIVFQLKISKHSFPT-HPEAK-TTKMIKH-LTP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLALPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMIWEAFASKREVSTVELTSTNLEWLHGCPPPYHTFEEPAYVNL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISSMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLVASRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEEWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTLLLALGLLTNILTMYQWWRDIIRESTFQGHHTSIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMLQGLFITISLGVYFTLLQASEYYEASFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGIILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHETGSNNPSGIPSDMDKIPFHPYYTIKDILGLLLLILLLLTLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALIPTLHMSKQRSMMFRPLSQCVFWLLVADLLTLTWIGGQPVEHPYVIIGQLASILYFSLILIFMPLASTIENNLL---KW--------MF--------MINVLLLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADALKLFIKEPLRPLTSSTSMFIIAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLITTQEYLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNIFTTTLFLGAFHNPYLPELYSINFTIKALLLTCSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMLSSI-P-PQT--MNP-LILTIILMTVFLGTMIVMMSSHWLMIWIGFEMNLLAIIPILMKKYSPR-AMEASTKYFLTQATASMLLMMAIIINLMYSSQW--TITKIFNPTASIIMTSALAMKLGLTPFHFWVPEVTQGISLTSGLILLTWQKLAPMSVLYQISPSINLNILLTM-AVLSILVGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLAYNPTLTMLNMLIYIMMTLTMFMLFIHSSSTTTLSL---SHTWNKMPLTTTLILITLLSMGGLPPLSGFVPKWMIIQELTKNSSIILPTLMAIMALLNLYFYMRLTYSTSLTMFPSTNNMKMKW-QFE-TKQITLL-------PPLIIASSLLLPLTPMLSILD---MN-LMLTLLTNTLLASLLVLIAFWLPQLNIYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLIMALILISLLAISLAYEWTQKG--LEWTE-MSLVHINIFLAFTISLMGLLMYRSHLMSSLLCLEGMMLSLFVMATMMVLNTHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGVDHVQNLNLLQCMLKIIIPTIMLMPLTWLSKKNMIWINATTYSLLISLISL-SLLNQPNNNSLNFS-LMFFSDPLSAPLLVLTTWLLPLMLMASQHHLSKEPLIRKKLYITMLAMLQTFLIMTFTATELISFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALISIQNLTGSLNFLLIQYWNQTLP-NSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNP-QTNFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSNITIILMGANITITALYSLYMLITTQRGKYTHHINNIKPSFTRENALMALHMTPLLLLSLNPKIILGFTY--------MFSSL-MLVSLSVLTLPIMSS---ILNTHKN-GTYPHHVKNI-ISYAFITSLIPTMMFIHSGQETIISNWHWMTMQTLKLSLSFKLDYFSMVFVPVALFVTWSIMEFSLWYMHSDPYITRFFKYLLTFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFIMAMAWFLFNTNTWDLQQIFMLNPN-LTNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTVQSLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFNAMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-LTAVYSTRIIFFALLGQPRFLPLTSINENNPFLINSIKRLLIGSIFAGFFISNNIYPTTIPEMTMPTYMKLTALAVTILGFTLALELSLITHNLK--LEHPTNTFKFSNLLGYYPTIMHRLPPLANLSMSQKSASLLLDSIWLENILPKSISQFQMKTSI--LISTQKGQIKLYFLS---FLITL--TLSMLLF----------NLHE---- +>Muntiacus_reevesi_Reeves_muntjac +----MNENLFASFITPM-ILGLPLTTLIVMFPSLLFPTSN-RLVNNRLISLQQWALQLVSKQMMGIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLIIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFIMIMSMF-LVLFIIFQLKISKHSFYF-NPEPM-LTKTQKQ-NIP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSIILLTLGLTTNMLTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGALLLILSLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALISSILVLILMPLLHTSKQRSMIFRPLSQCLFWILVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPIISTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASILSYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-IIFIIILSTLMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFSLFMANSATTTLSL---SHTWNKMPVMATLILVTLLSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTLMAITALLNLYFYMRLTYSTALTMFPSMNNMKMKW-QFPTTKQMTLL-------PTMVILSTMLLPLTPILSVLE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALFLILLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVSLAGLLMYRSHLMSSLLCLEGMMLSLFVLATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWLSKGTMIWINSTTHSLLISFTSL-LLMNQFSDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLTASQHHLSKESLTRKKLYITMLILLQLFLIMTFTAAELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNTTGSLNFLVLQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLIMTQRGKHTHHINNISPSFTRENALMSLHILPLLLLSLNPKVILGSLY------MNLFSSF-TLVTLLLLAIPILTM---SSENYKT-SNFPFYVKTT-ISCAFLTSMIPTMMFIHTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLNPS-NSNLPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSKLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTAVIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPALININENNPFLMNSIKRLMIGSLFAGFIISNNIPPMTVPQMTMPHHLKMMALAVTILGFILALEISNMTQNLK--LNYPTNIFKFSNMLGYFPTIMHRLAPYMNLTMSQKSASSLLDLIWLENILPKTTSLAQTKMSA--MITSQKGLIKLYFLS---FLVTI--IISMILF----------NFHE---- +>Hydropotes_inermis_Chinese_water_deer +----MNENLFASFITPM-ILGLPLVTLIVIFPSLLFPTSN-RLISNRLISLQQWVLQLVSKQMMGIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISTTMAFITFIILVLLTVLEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLVMILSMF-MVLFIIFQLKVSKHNFYF-NPEPK-STKMQKQ-NTP-W-EVKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSIILLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNMRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGVLLLILFLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILVLILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIIIGQLASILYFLIILVLMPIISSIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTLWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-IIFIIILSTMMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKMPVMTVLVLTTLLSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVILSTMLLPLTPMLSVLE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDNLYTMLIMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFTVSLVGLLMYRSHLMSSLLCLEGMMLALFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYVVPTMMLMPLTWLSKSNMIWINSTTHSLMISFTGL-LLMNQFSDNSLNFS-LLFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYISMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALVYLQNINGSLNFMLIQYWVEPLS-NSW-----SNVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITTLLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-TLITLFLLTIPIIIT---SSDNYKT-SNYPLYVKTT-ISCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTVKLSMSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLMNLNAWDFQQIFMLNPN-DSNVPLLGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLPLTE-FTAIYSTRIIFFALLNQPRFPTLVIINENNPFLMNSIKRLMIGSLFAGFIISNSIPPTTIPQMTMPYHLKMMALMVTIMGFILALEISNMTQNLK--FNYSSNIFKFSNMLGYFPTILHRLTPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQTKMSI--MVTSQKGLIKLYFLS---FLVTI--VISMILF----------NFHE---- +>Beatragus_hunteri_ +----MNENLFASFITPV-MLGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWMLQLVSKQMMSIHNTKGQTWALMLMTLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIVFQLKISKHNFYH-SPELV-PTKMLKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLMLGLTTNMLTMYQWWRDIIRESTFQGHHTSAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIINNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCMFWVLVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPMASTIENNLL---KW--------MF--------MLNILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILMTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGISLSSGLILLTWQKLAPMSVLYQISPSINLNLILAL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYVIMTSTMFTLFMANSTTTTLSL---SHTWNKAPIMTALVLVTLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMIVMSTMLLPLTPILSILE---MN-LMMALLTNLTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTVNLTTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNSHFTLASMVPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKSNMIWINPTLHSLLISLTSL-LLMNQFGDSSLNFS-LTFFSDSLSMPLLILTMWLLPLMLMASQYHLSKENLIRKKLFISMLILLQLFLIMTFTATELIFFYILFEATLVPTLIIITRWGNQTERLSAGLYFLFYTLTGSLPLLVALIYIQNTVGSLNFLILQYWVQPMT-NSW-----SNVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTDFMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVVSTFSWSNATIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSL-TLTTLLLLTIPIAMT---SSSAYKA-PDYPHHVKTA-ISYAFTISMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFIMAMAWFLANLNTWDLQQIFMLEPT-NSNMPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTALCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGTPFLTGFYSKDLIIESANTSYTNAWALLMTLVATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFILSNSIPPTTVPQMTMPHYLKMTALAVTILGFILALEISNMTYNLK--FNYPSNPFKFSNQLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQMKAST--MITSQKGLIKLYFLS---FLITI--LVSMILL----------NFHE---- +>Pseudois_nayaur_bharal +----MNENLFTSFITPM-MLGLPLVTLIILFPSLLFPTPN-RLINNRLISLQQWALQLVSKQMMSIHNTKGQSWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKVSLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTN-ISTTTALITFVILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTVILSMF-LALFIVFQLKISKHNFYH-NPELT-TTEMSKQ-NAP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAMILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTPELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLVLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLTLQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGIILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAMVHLLFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGAALLILALMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILVLMPFLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVMMPVASSIENNLL---KW--------MF--------MINVLTLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFNLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINFIIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILTTVMLGTAIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPTASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKAPIMTVLVLITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLTYSTALTMFPSTNNTKMKW-QFSTTKRMSLL-------PTMTVLSTMLLPLTPILSILE---MN-LMITLLTNFSLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMTAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTLHSLLISLTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLARKKLFISMLILLQLFLIMTFTATELIFFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALVYIQNTMGSLNFLVLQYWVQPMP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITLLLNP-TTDSMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLVGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLIMTQRGKYTHHINNIPPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSL-ALTTLILLTAPIMTT---NLNIHKP-TNYPLYVKTT-VSCAFITSMIPTMMFIHTGQEMIISNWHWLSIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDFQQIFMLKPE-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLAENNKLAQSIMLCLGAITTMFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLVATS-FTAIYSTRIIFFALLGQPRFPTLININENNPFLTNSIKRLLIGSLFAGFIISNSIPPTTIPQMTMPHHLKMTALTITILGFILALEISNMTHYLK--FNYPSNAFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLETILPKTISLTQMKMST--MITSQKGLIKLYFLS---FLITI--LVSTVLL----------NFHE---- +>Cephalophus_leucogaster_white-bellied_duiker +----MNENLFASFITPM-VLGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWMLQLISKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILVLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHSFYL-SPELV-LMKMSKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHTYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMALLMLGLTTNMLTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNNAFIDLPAPSNISSWWNFGSLLGVCLILQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTYMETWNVGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGISSDTDKIPFHPYYTIKDILGALLLILALMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPVASTIENNLL---KW--------MF--------MINILALIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPVLALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTVKSLLLTTTFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IISFIILLTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLYNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SMLSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLIIYIIMTSTMFTLFMTNSTTTTLSL---SHTWNKMPVMTVLVLVTLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSVLE---MN-LMLALLTNLVLATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLAVSLAYEWTQKG--LEWTE-MSLVFMNIMLAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTMHSLLISLTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQNHLSKENLTRKKLFITMLILLQLFLIMTFTATELILFYVLFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIYIQNTTGSLNFLVLQYWAQPMS-SSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMVAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLIMTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLLLLTIPIMMT---SSPTYKT-SNYPLYVKTT-ISYAFFISMIPTMMFIYTGQEAIISNWHWLTMQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPN-NSSLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLAENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPMTIPQMTMPYYLKMTALAVTILGFILALEISNMTHNLK--FNYPSNTFKFSNLLGYYPMIMHRLTPYLNLTMSQKSASSLLDLIWLESILPKTTSLIQMKTST--MITNQKGLIKLYFLS---FLITI--LISMILF----------NFHE---- +>Capra_hircus_goat +----MNENLFTSFITPM-MLGLPLVTLIILFPSLLFPSSN-RLINNRLISLQQWALQLMSKQMMSIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTS-ISPTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTTILSMF-LALFIIFQLKISKYDFYH-NPELT--AKMLKH-NTP-W-ETKWTKIYLP-LL-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVSL-K--------MAYPMQLGFQDAASPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLTMWFHFNSTVLLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIMLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHIGRGLYYGSYTFLETWNIGVILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGAMLLILVLMLLVLFTPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLVPFLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVMMPAASTIENNLL---KW--------MF--------MINILTFIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFALSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINFIIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILMTVMLGTTIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVTKLFHPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLDLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILPYNPTMMLLNLIIYITMTSTMFLLFMANSTTTTLSL---SLTWNKMPIMTTLVLITLLSMGGLPPLSGFVPKWMIIQEMTKNNSIILPTLMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFSTTKRMTLL-------PTLTVLSTMLLPLTPILSILE---MN-LMITLLTNFTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMTAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTLHSLLISFTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLLKESPTRKKLFISMLVLLQLFLIMTFTATELIFFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIHIQNTVGSLNFLILQYWAQPVP-NSW-----SNVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITLLLNP-ITDYMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKHTHHINNILPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSL-ALTTLTLLTAPIMMT---NLNIYKS-TNYPLYVKTV-VSYAFITSMVPTMMFIYTGQEMVISNWHWLSIQTLKLSLSFKMDYFSVMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILTMAWFLINLNTWDLQQIFMLKPE-NSNLPLMGLTLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAVYSTRIIFFALLGQPRFPTLININENNPFLMNSIKRLLIGSLFAGFFISNNIPPMTIPQITMPHYLKMTALAVTILGFILALETANMTHHLK--FNYSSNMFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLETILPKTISQAQMKMAT--TTTNQKGLIKLYFLS---FLVTI--LVSTILF----------NFHE---- +>Connochaetes_taurinus_brindled_gnu +----MNENLFASFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLVNNRLISIQQWLLQLVSKQMMSIHNTKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLALMS-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LALFIIFQLKISKHNFYH-NPELA-PTKTLKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNIFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSTALLMLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYTFLETWNVGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPTGISSDTDKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPAASTIENNLL---KW--------MF--------MLNILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTATLFLGAFHNPYMPELYTINFIIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIITLMTVMLGTMIVMISSHWLFIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMYSGQW--TVMKLFNPMASMLMTMALTMKLGMAPFHFWVPEVTQGISLSSGLILLTWQKLAPMSVLYQISPSINLNLIMTL-SILSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKAPIMTALVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMIVMSTMLLPLTPILSILE---MN-LMMALLTNLTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLTTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIIPTAMLMPLTWLSKNNMIWINPTLHSLLISLTSL-LLMNQFGDNSLNFS-PTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLVRKKLFISMLILLQLFLIMTFTAAELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYIQNTMGSLNFLILQYWVQPIT-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-MTDFMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMSTFSWSTITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNMFSSL-TLTTLLLLIIPIVMT---SSNSHKN-PNYPLYVKTA-ISYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFVLAMAWFLTKLNTWDLQQIFMLEPT-NSNLPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLAQSIMLCLGAITTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPALIIINENNPLLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPHYLKTTALMVTILGFILALEISNMTYNLK--FNLPSNMFKFSNLLGYYPTIMHRLAPHMNLTMSQKSASSLLDLIWLENILPKTTSLIQMKMSI--TITNQKGLIKLYFLS---FLITI--LVSTILL----------NFHE---- +>Rattus_niobe_Eastern_New_Guinea_mountain_rat +----MNENLFASFITPT-VMGLPIVVTIIMFPSILFPSSE-RLISNRLHSFQHWLVKLIIKQMMLIHTPKGRTWALMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVILGFRHKLKNSLAHFLPQGTPISLIPMLIVIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTMLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISSM-ITLFILFQLKISSQTFPT-APSPK-ILTTEKT-NNP-W-ELKWTKIYLP-LS-LPQQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPP--KVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVLVMIFMIWEAFASKREVLSVSYSSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSASMI----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHYNSTILLSLGLLTNILTMYQWWRDIIREGTYQGHHTPIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTHDLGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMNQALLITILLGLYFTTLQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIICLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLLKIINHSFIDLPAPSNISSWWNFGSLLGVCLMIQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYLHANGASTFFICLYLHVGRGMYYGSYTFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLNSNADKIPFHPYYTIKDLLGVFMLLLFLMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAFLPFLHTSKQRSLTFRPITQTLYWILAANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIEDKML---KWN-------MY--------FINILTLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPTLSLTLALSLWVPLPMPHPLINLNLGMLFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQMLITTQEHIWLLVPAWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTSIVFLGPLYYINHPELYSINFMTETLLLSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWYISIPVFLAGI-P-PYT--MNP-ITLIIIYFTILMGPVITMSSSNLLLMWVGLEVSLLSIVPLLTDKKSPR-STEAATKYFLTQATASMIMLLAIILNYKQSGMW--MFQQHTNNMLLNMTLISLAMKLGLAPFHYWLPEVTQGIPMHIGLILLTWQKIAPLSILYQIYQLLNPTITTIL-AITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLMLLNLMIYILLTIPMFISLMMNSATTINSF---SLTWNKTPMILTMASIVLLSMGGLPPLTGFLPKWAIISELLKNNCSILSTLMAMMALLNLFFYTRLIYSMSLTMFPTNNNSKMTS-HHTNLKYNLIL-------PTLTVLSTLTLPLSPQLMT-----MN-LFIIITINITLSFILIMIAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAVQTTNITTMTTTAFILITILSLGLSYEWTQKG--LEWTE-MTSAFLNLTLAFTLSLLGTLMFRSHLMSTLLCLEGMMLSLFIMTSTSTLNSNSMVSMTIPITILVFAACEAAVGLALLAKISNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLTWLSNNKKVWTNVTSYSFMVSLMSL-SLLWQNDENHLNFS-ITFSSDPLSTPLIILTTWLLPLMILASQNHMKKENLMHQKLYISMLISLQTLLIMTFSTTELILFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALISIQNSMGTLNFLILSLTTQPLS-PTW-----SNNIMWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRVSIILDP-LTKSLAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAIMIQTPWSFMGATMLMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMIFPLMATWWLLASLANLALPPLINLMGELFIIMATFSWSNPSIILTAANIVITGTYSMYMIITTQRGKLTSHMNNLQPSHTRELTLMALHIIPLMLLTINPKLITGLTM------MNMMTSA-ILMILVLLTAPIIIS---TTNLPKL-IDFPSYATSS-IKFSFFLSLLPLLLFLHYNTEYMITNWHWLTINSIKLNMSFKIDYFSTLFLSVALFVTWSIMQFSSWYMHSDPHINRFIKYLMLFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRVGDIGFILAMTWFCLNMNSWELQQIFLT-NN-SNLVPLMGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFHPLTSNNSTIMTAMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGNMMKVMPFTSSCLIIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALMITLIATS-MTAMYSMRIIYFVTMTKPRYSPLITINENNPNLINPIKRLALGSIMAGFLISLNIPPTNIQVLTMPWYLKMTALFITILGFTIALELNNLTLNFSS-TNKPTRPSLFSTSLGYFPSIMHRAIPQKTLNSSYKMSLNLLDLIWLEKTIPKSTSITHTHLSK--MMANQKGLIKLYFLS---FLITI--SLIFILHML---------NPEWFQ- +>Phoca_fasciata_ribbon_seal +----MNENLFASFTTPT-MMGLPIVILIVLFPSILFPSPD-RLINNRLASIQQWLIQLTSKQMLSIHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVIMGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMD-ISTTTAFITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFIMILSMV-LTLFITFQLKISKHYFPT-NPEPK-HTLLLKN-NSP-W-EEKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFASKREVAAVELTTTNIEWLHGCPPPYHTFEEPTYVVL-K--------MAYPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMYLLMLGLTTNTLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGIYFTLLQASEYYETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFMRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINSSFIDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYMHVGRGLYYGSYTFTETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFILPFVVSALAAVHLLFLHETGSNNPSGIVSDSDKIPFHPYYTIKDILGALLLILVLMLLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIVPLLHTSKQRGMMFRPISQCLFWLLVADLLTLTWIGGQPVEHPYITIGQLASILYFMILLVLMPIASIIENNIL---KW--------MF--------MINIISLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSTTMFIMAPILALALALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIMMNILTTLLFFGAFHNPYMPELYIINFTTKTLALTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIISASI-P-PQT--MKP-PILIIIMSTIMSGTMIVLTSSHWLLTWIGFEMNMLAIIPILMKNHTPR-ATEASTKYFLTQATASMLLMMGIIINLMFSGQW--TISKIPNPIASGLMTIALAMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISSSINPKLLTIM-AIASVLIGGWGGLNQTQLRKILAYSSIAHMGWMAVILTYNTTLMILNLTIYITMTLSTFMLFMYNSSTTTLSL---SNTWNKLPLMTSLILMLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTMFPSVNNMKMKW-QFESTKKIILL-------SPLIITSTMLLPMTPMMSILE---MN-MALTLFTNTALASLLVLIAFWLPQLNTYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHTDNLTTMLTMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYANIFLAFIMSLMGLLMYRSHLMSSLLCLEGMMLSLFVMMTVTILNNHFTLANMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIILPTIMLMPLTWMSKSNMIWINTTAYSLLISLVSL-SFLNQLGDNCMNLS-LLFFTDSLSAPLLTLTTWLLPLMLMASQFHLSKEPLARKKLYITMLVLLQLFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLFIQNNMGTLNFLMIQLWAQPLP-SSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITVLLSP-LTSSMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQVLLPLMAAWWLLASLANLALPPTINLIGELFVVMASFSWSNITIILMGTNIIITALYSLYMLITTQRGKYTHHIKNIKPSFTRENALMTLHLMPLLLLSLNPKIILGPIY------MNLFASS-ITTTLSMLMLPIILA---STSIYKN-KLYPQYVKTT-ILYAFMISMIPTTMFIYSGQEMIISNWHWMTIQTMKLTLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAVLYNRIGDVGFIMAMAWFLINLNTWELQQIFIIPHN-NLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNTMMQTTTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLYKVLPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLLTLIATS-MTAAYSTRIMFFALLGQPRFNPMITINENNPLLINSIKRLLLGSIFAGYLISYNITPTSTPQMTMPHYLKLTALTVTLLGFILALELNLTSQNLK--LKYPSNMFKFSNLLGYFPTIIHRYVPMTNLSASQKLASTLLDLIWLESTLPKSISYFHMKSSI--TVSNQKGLIKLYFLS---FIVTL--ILALMMI----------NSHE---- +>Rattus_lutreolus_Australian_swamp_rat +----MNENLFASFITPT-VMGLPIVVTIIMFPSILFPSSE-RLITNRLHSFQHWLIKLIIKQMMLIHTPKGRTWTLMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVILGFRHKLKNSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISSM-ITLFILFQLKISSQTFPA-TPSPK-IMATEKS-NNP-W-ELKWTKIYLP-LS-LPQQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVLVMIFMIWEAFASKREVLSVSYSSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI----------MAHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHYNSTILLSLGLLTNILTMYQWWRDIIREGTFQGHHTPIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMNQALLITILLGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIICLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLLKIINHSFIDLPAPSNISSWWNFGSLLGVCLMIQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLYLHVGRGMYYGSYTFLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLDSNADKIPFHPYYTIKDLLGVFMLFLFLMTLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAFLPFLHTSKQRSLTFRPITQILYWILAANLLILTWIGGQPVEHPFIIIGQLASISYFSIILVLMPISGIIEDKML---KWN-------MY--------FINILTLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPTLSLTLALSLWIPLPMPHPLINLNLGMLFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQMLITTQEHTWLLMPAWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTSIVFLGPLYYINHPELYSINFMTETLLLSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPIFSAGI-P-PYT--MNP-ITLIIIYFTIFMGPTITMSSSNLLLMWVGLEVSLLAIVPLLTNKKTPR-STEAATKYFLTQATASMIMLLAIILNFKQSGVW--VFQQQTNSMLLNMTLISLAMKLGLAPFHYWLPEVTQGIPMHIGLILLTWQKIAPLSILYQIHQLLNPTITTIL-AITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLMIYILLTIPMFISLMTDSATTINSF---SLAWNKTPMILAMTSIILLSMGGLPPLTGFLPKWTIISELLKNNCSILPTLMAMMALLNLFFYTRLIYSVSLTMFPTNNNSKMIS-HHTNLKYSPIL-------PTLTVLSTLTLPLSSQLMT-----MN-LFIIIMINITLSFILITIAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAVQTTNITTMTTTAFILITILALGLSYEWTQKG--LEWTE-MTSAFLNLTLAFTLSLLGTLMFRSHLMSTLLCLEGMMLSLFIMTSTSTLNSNSMASMTIPITILVFAACEAAVGLALLAKISNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLTWLSTNKKVWTNVTSYSFLVSLTSL-SLLWQNNENYLNFS-TTFSSDPLSTPLIILTAWLLPLMILASQNHMKKETPTHQKLYISMLISLQTLLIMTFSTTELILFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALLSIQNSMGTLNFLILSLTTQPLS-STW-----SNNIMWLACMMAFMVKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRVSIILDP-LTKSLAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAIMIQTPWSFMGATMLMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQTIFPLMATWWLLASLANLALPPLINLMGELFIVMATFSWSNPSIILTATNIVITGMYSMYMIITTQRGKLTSHMNNLQPSHTRELTLMALHIIPLLLLTANPKLITGLTM------MNMMTSA-ILMILVLLTAPIIIS---MTNLPKL-MDFPSYATSS-IKFSFFLSLLPLLLFFHYNTEYMITNWHWLTINSINLSMSFKIDYFSILFLSVALFVTWSIMQFSSWYMHSDPHINRFIKYLMLFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRVGDIGFILAMTWFCLNTNSWELQQIFLA-NN-SNLVPLMGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFHPLTSNNSTIMTAMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGSIMKVMPFTSSCLIIGSLALTGMPFLTGFYSKDLIIEAISTCNTNAWALMVTLIATS-MTAMYSMRIIYFVTMTKPRYSPLITINENNPNLINPIKRLALGSIMAGFLISLNIPPTNIQVLTMPWYLKMTALFITILGFAIALELNNSTLNLLP-TKEATRPSLFSTSLGYFPSIVHRAIPQKTLNTSYKMSLNLLDLIWLEKTIPKSTSITHTHLSK--MMADQKGLIKLYFLS---FLITI--SLIFILHTL---------NPEWFQ- +>Prionailurus_bengalensis_euptilurus_ +----MNENLFASFTTPT-MMGLPIVILIIMFPSILFPSPN-RLINNRLVSLQQWLVQLTSKQMLAIHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGAALALAN-ISTSIALITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIMSMI-MTLFIVFQLKISKYSYPS-NPELK-STATLKQ-LNP-W-EKKWTKIYSP-LS-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFMVWEAFASKREVAMVELTTTNLEWLHGCPPPYHTFEEPTYVLL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMGTRPGLYYGQCSEICGSNHSFMPIVLELVPLTYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAIWFHYNSTLLLALGMTTNLLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLKYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGMYYGSYTFSETWNIGIMLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGITSDSDKIPFHPYYTIKDILGLLVLILTLMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIIPILHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEYPFITIGQLASILYFSTLLVLMPISGIIENRLL---KW--------MF--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSMFMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLATLIITQEYMWLIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHNPYMPELYAVNFTVKTLLLTTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIITASI-P-PQT--MKP-SIFIIIMSTVISGTMIVMTTSHWLMVWIGFEMNLLAIIPILMKKYNPR-AMEAATKYFLTQATASMILMMGIIINLLYSGQW--TVSKDLNPMASIMMTIALAMKLGLAPFHFWVPEVTQGISMSSGLILLTWQKIAPLSILYQISPTINPNLLLTM-SIMSVMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMMYSPTMMILNLAIYIIMTLTTFMLFMYNSTTTTSSL---SQTWNKTPLITSLILVLMMSLGGLPPLSGFIPKWMIIQELTKNEMIMMPTLLAMTALLNLYFYMRLTYTTALTMFPSNNSMKMKW-RFECTKKMTFL-------PTLIVMSTMMLPLTPMLSILD---MN-VMLALLTNTLLSTLLVLIAFWLPQLNIYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTSKLSTMLTMALLLISLLAASLAYEWTQKG--LEWTE-MSMVYINIFLAFTVSLMGLLMYRSHLMSSLLCLEGMMLSLFIMMTVAVLNNHFTLANMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTAMLMPMTWLSKPNMIWINSTTYSLLISLISL-SYLNQLGDNSLNFS-LLFFSDSLSAPLLVLTTWLLPLMLMASQSHLSKENLTRKKLYITMLILLQLLLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNTMGTLNFLIIQYWAKPIS-TTW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITVLLNP-ATNQMAYPFMMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTILPLMAAWWLLASLANLALPPTINLIGELFVVMASFSWSNMTIILMGTNIIITALYSLYMLITTQRGKYTHHIKNINPSFTRENALMTLHMLPLLLLSLNPKIVLGPIY------MNLFTSL-ILTAMFILLLPIIMS---NTRLYKN-NLYPHYVKTT-ISYAFTISMIPAMMFISSGQEAVISNWHWLSIQTLKLSLSFKMDYFSIIFIPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMTMAWFLTNSNAWDFQQIFITQHE-NLNIPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQNKTMQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLYKPMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-LTAAYSTRIMFFVLLEQPRFNTLNLINENNTYLINSIKRLLIGSIFAGYLISYNIPPTTIPQMTMPHYLKLTALAVTITGFILALELNLAAKNLK--FMYPSNLFKFSNLLGYFPIVMHRLPSKMSLTMSQKSASMLLDMIWLENVLPKSISYFQMKMST--TVSNQKGLVKLYFLS---FMITL--TLSLILL----------NSHEWLP- +>Rupicapra_rupicapra_chamois +----MNENLFAPFITPM-MLGLPLVTLIILFPSLLFPTSN-RLINNRLISLQQWILQLVSKQMMSIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGTTLALMN-ISTTAALITFVILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFTMILSMF-LVLFIIFQLKISKHNFHH-NPEST-MTKAPEQ-DTP-W-KTKWTKICLP-LS-LPL-----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMTFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAVILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTVRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASMS----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSXXLLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQXKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALALVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGAMLLVLTLMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALVPLLHTSKQRSMMFRPISQCMFWILAADLLTLTWIGGQPVEHPYIIIGQLASIMYFFIILVMMPVASTIENNLL---KWK-------MF--------MINVLMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSASMFILAPILALTLALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGSFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFIIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSGI-P-PQT--MNP-IIFIIILMTVMLGTTIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFMTQSTASMLLMMAIIMNLMFSGQW--TVMKLFNPAASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLDLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKAPIMTVLALVTLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTFMAITALLNLYFYMRLSYSTTLTMFPSTNNMKMKW-QFPTTKRMTLL-------PTMTVLSTMLLPLTPILSILE---MN-LMITLLTNFMLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMTAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIVPTMMLMPLTWLSKNSTIWINSTLHSLLISFTSL-LLMNQLGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESLARKKLFISMLVLLQLFLIMTFAATELILFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNMMGSLNFLVLQYWVQPMS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-TTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMVAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLIMTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSL-TLTTLALLTAPIMAI---NLNIHKS-TNYPLYVKTT-ISCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDFFSVLFVPVALFVTWSIMEFSMWYMHSDPHINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLVNSNTWDFQQIFMLKPD-NSNLPLMGLVLAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLIENNKLVQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTTTALVIGSLALTGIPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPLLINSIKRLLIGSLFAGFIISNSIPPTTIPQMTMPIYLKLTALAVTILGFILALEMNNMTHYLK--FNYPSNMFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLETILPKTISLAQMKMST--MITNQKGLIKLYFLS---FLITI--LISTILF----------NFHE---- +>Cacajao_calvus_Bald_Uacari +----MNQNLFASFNIPI-ILGIPMVTLVILFPTMLLMPPN-NLINNRLSSIQQWLIQLTLKQMMITHSTKGRTWSLMLLALITFIALNNLLGMTPYAFTPTTQLSMNLGMAIPLWAATVLVGLRFKTKSSLAHLLPQGTPTLLIPILIIIETISLFIQPMALAVRLTANITAGHLLMHLLGSTSLTLLS-IYLSSSLITIIVIILLITLELGVALIQAYVFTLLVSLYLHNNSMPQLEISSWPAVILSMV-VALFYSIQMKMLNFTFYT-SPLSN-NIKNYKY-KTT-W-QMKWTKIYLP-LS-TSPLS---MFMNRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRAELGQPGSLMEDDHVYNVIVTSHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTTMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIISSVGSFISLTAVILMIFMIWEAFSSKRKVLTIEQPHTNLEWLYGCPPPYHTFEEATYVKLLNEKG-----MAHPAQLGLQNATSPIMEELIAFHDHTLMIIFLISSLVLYTISLMLTTKLTHTSTMNAQEIEMIWTILPAIILVMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYEDLAFDSYIVPTYFLEPGEFRLLEVDNRTTLPMEADIRMLISSQDVLHSWAVPSLGIKADAIPGRLNQAMVASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWASYLYIV--------MTHQSHAYHMVNPSPWPLTGALSAFLMTSGLIMWFHFYHTLLLYAGLLASAMTMFQWWRDVVREGTYQGHHTPPVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPQTGGHWPPTGIFPLNPMEVPLLNTAVLLASGVTITWAHHSLMESDQEQSAQALFLTIALGAYFTYLQMSEYSEAPFTISDGIYGSTFFMATGFHGLHVIIGTTFLITCYFRLQMDHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MAAPRKTHPLMKIINSSFIDLPTPPNISSWWNFGSLLGICLIIQIITGLFLAMHYTSDSSTAFSSVAHITRDVNYGWMVRYLHANGASLFFMCLFLHIGRGMYYGSFLFLNTWNIGIILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPDLVQWIWGGFSVDKATLTRFFTFHFILPFIIAALASIHLLFLHDTGSNNPSGLTSDPDKVSFHPYYTIKDILGLVFLLLLLMSLTLFMPDLLTDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILTIIPMMHTSKQQSMTFRPISQSLFWALVADLFTLTWIGGQPVEYPFISIGQTASTLYFLII-SITPLLALIENKLL---KW--------MP--------MINLLLLIIPALIAMAFLTLMERKILGYMQLRKGPNIVGPYGLLQPIADAMKLFTKEPLMPTTSTVTLYVAAPALALSIALLLWAPLPMPYSLINLNLGLLFMLAMSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNIHSLITTQEHSWLLLSSWPLATMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIIMNALTTTIFLAAPHTPTMPELYSIYFMTKTLMLTALFLWIRTAYPRLRYDQLMHLLWKKFLPLTLALCMWYISMPTLTSSV-P-PQT--MNP-LAHLTISFTILTGTMIAILSSHWFFIWMGLELNMLSIIPILAKSTNPR-STEAATKYFLTQATASMILLMAIILNNLLYGQW--TINPSLNQILSTMMLIALTMKLGMAPLHFWLPEVVQGIPLIPAMLILTWQKLAPMSIIIQIFPSINTNLILMI-SILSIMVGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYNPNITILSLLIYLFLTISTFMVFYLNSNVTTLSM---SHTWNKLTWVVPMTTLMMLSLGGLPPLTGFSPKWAIMQELTKNNNLIIPLVMAMLTLTNLYFYMRLTYSISMTMFPTSNSTKINW-QLKYMKPSPLL-------PLLMMASTSLLPLTPLMLAN----MN-LALTLTTNVLLALLLTTIAFWLPQLNTYTEKYNPYECGFDPTTSAHLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTDNLMLTINMVLTLIIILVVGLAYEWAQKG--LDWVE-MHFIYINMALAYFMSMLGLLIYRSHLMSSLLCLEGMMLSLFIMTTLMTLNLHSTLMFIAPVALLVFAACEAAVGLALLVLISNLYGLDYVQNLNLLQCMLKIILPMMMLLPTMWLSKNYMAWINLISWSLLISTTTL-PPLYLPN-NSHYLS-SVFFLDALASPLLVLTAWLLPLMILATQQHLYNNPPPRKKLYISMLVLLQMSLIMTFTATELILFYVLFETTLIPTLIIITRWGYQPERLNAGSYFLFYTLAGSLPLLITLLYYSNTLGSLNILMTMITTKEML-LSW-----TNNITWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITPILNP-LTEKMNYPFLILSLWGMTMTS--AMCLRQADLKSLIAYSSVSHMALVILAILIQTPWSFTGAMILMIAHGLTSSLLFCLANSNYERIHSRTMMFTRGLQTLFPLLALWWLSANLANLALPPTMNLVGELLTIMASFSWSNFTIMFTGLNMLITALYSLHMFTSTQRGPLTYSTSNIKPPFTRGNTLMLMHVMPILLITLNPKVIMGLMP------------M-ILMTLIPLLTPIMIT---LIKPYKT-SLYPHYVKLA-IIYALIISTLSTTMYVFTGQEHMIYNWHWTTIQTIKLSISFKLDFFSMMFTPVALFVTWSIVEFSMWYMSSDPNINKFLKYLLIFLVTMLILVTANNLFQLFIGWEGIGIMSFLLISWWHGRADANTAALQAILYNRVGDIGLILAMTWFLLYYNSWELQQMFMLGPT-PNSLPLVGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLIIRLHPLFEKNLSVQTLMLSIGAITTLFTAICALTQNDMKKIVAFSTSSQLG--LMMVTVGINQPYLAFLHICTHAFFKAMLFLASGSIIHSLNNEQDIRKMGGLFKSLPFTSSSIIIGSLALMGMPFLTGFYSKDLIIETANMSYTNAWALMITLVATS-LTAMYSIRIIFFTLTEHPRFNNLIMINENNPLLMKPINRLAMGSIFAGFLISNCTPPMIYPQVTMPQYLKLTALGVTISGLLMAMELNLMTNSMK--LGTPTKTYYFSNMLGFYSTTTHRSNPYLSLTTSQNTTSMLLDMFWFEKSMPKMTATTQTSIST--TTSAQKGLIKLYFLS---FLIPP--ALASLLTI----------------- +>Rattus_fuscipes_bush_rat +----MNENLFASFITPT-VMGLPIVVTIIMFPSILFPSSE-RLISNRLHSFQHWLIKLIIKQMMLIHSPKGRTWALMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVILGFRHKLKNSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTIVSSM-ITLFILFQLKISSQTFPA-APSSK-VMTTEKT-NNP-W-ELKWTKIYLP-LS-LPQQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLNDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLVMIFMIWEAFASKREVLSVSYSSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAYPFQLGLQDASSPIMEELTNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTHDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHYNSTILLSLGLLTNILTMYQWWRDIIREGTFQGHHTPIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTHDLGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMNQALLITILLGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIICLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLLKIINHSFVDLPAPSNISSWWNFGSLLGMCLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLYLHVGRGMYYGSYTFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLDSNADKIPFHPYYTIKDLLGVFMLLLFLMTLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAFLPFLHTSKQRSLTFRPITQTLYWILAANLLILTWIGGQPVEYPFIIIGQLASISYFSIILILMPISGIIEDKML---KWN-------MY--------FINILTLLAPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPTLSLSLALSLWVPLPMPHPLINLNLGMLFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQMLITTQEHIWLLIPAWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNILLMNALTSIVFLGPLYYITHPELYSFNFMTETLLLSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPIFLAGI-P-PYT--MNP-ITLIIIYFTLFMGPVITMSSSNLLLMWVGLEMSLLAIIPLLTNKKTPR-STEAATKYFLTQATASMILLLAIILNYKQSGMW--MFQQQTNNMLLNMTLISMAMKLGLAPFHYWLPEVTQGIPMHIGLILLTWQKIAPLSILYQIYQLLNPTITTIL-AIASVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLMLLNLMIYILLTIPMFISFMMNSATTINSF---SLAWNKTPMILAMTSTVLLSMGGLPPLTGFLPKWTIISELLKNNCSILSTLMAIMALLNLFFYTRLIYSMSLTMFPTNNNSKMIS-HHTNLKHNPIL-------PTLTVLSTLTLPLSSQLMT-----MN-LLIIIMINIILSFILITIAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAVQTTNITTMMTTAFILITILSLGLSYEWTQKG--LEWTE-MTSAFLNLTSAFTLSLLGTLMFRSHLMSTLLCLEGMMLSLFIMTSTSTLNSNSMASMTIPITILVFAACEAAVGLALLAKISNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLTWLSNDKKVWTNITSYSFLVSLVSL-SLLWQNDENHLNFS-ITFSSDPLSTPLIILTTWLLPLMILASQNHMKKESPTHQKLYISMLISLQTLLIMTFSTMELILFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALISIQNSMGTLNFLILSLTTQPLS-STW-----SNNILWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDP-LTKSLAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAIMIQTPWSFMGATMLMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMIFPLMATWWLLASLANLALPPLINLMGELFIVMATFSWSNPSIILMATNIVITGMYSMYMIITTQRGKLTSHMNNLQPSHTRESTLMILHILPLMLLTINPKLITGLTM------MNMMTSA-ILMILMLLTAPIIIS---MTNLPKL-IDFPSYATSS-IKFSFFLSLLPLLLFFHYNTEYMITNWHWLTINSIKLSMSFKIDYFSTLFLSVALFVTWSIMQFSSWYMHSDPHINRFIKYLMLFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRVGDIGFILAMTWFCLNMNSWELQQIFLT-NN-SSLVPLTGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFHPLTSNNSTIMTAMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGSMMKVMPFTSSCLIIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALMITLIATS-MTAMYSMRIIYFVTMTKPRYSPLITINENNPNLINPIKRLALGSIMAGFIISLNIPPTNIQVLTMPWYLKMTALFVTMLGFAIALELNNLALNLSS-TNKTTRPSLFSTSLGYFPSIVHRIIPQKTLNSSYKMSLNLLDLIWLEKTIPKSTSITHIHLSK--MMANQKGLIKLYFLS---FLITI--SLIFILHTL---------SPEWFQ- +>Capreolus_pygargus_Eastern_roe_deer +----MNENLFASFIVPM-VLGLPLATLIIIFPSLLFPTSN-RLISNRLISLQQWMLQLVSKQMMGIHNTKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLIIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISTTMAFITFIILVLLTVLEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LVLFIIFQLKISKHNFYF-NPEPK-LTKTQKQ-NTP-W-ETKWTKIYLP-LL-LSQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKFFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGIYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSNADKIPFHPYYTIKDILGILLLILSLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFITIGQIASIMYFLIILVLMPITSTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-IIFIIILLTMMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMSKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLDMILAI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLVIYIIMTSTMFTLFMANSTTTTLSL---SHTWNNMPVMTVLVLITLMSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTLMAITALLNLYFYMRLSYSTALTMFPSTNNMKMKW-QFSTTKQMTFL-------PTMVTLSIMLLPLTPILSVLE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLIFLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFTVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYVMPTMMLMPLTWLSKSTMIWINSTTHSLVISLTSL-LLMNQFNDNSLNFS-LLFFSDALSMPLLILTMWLLPMMLMASQHHMSKENLARKKLYISTLILLQLFLIMTFTATELILFYIMFEATLLPTLIIITRWGNQTERLNAGLYFLFYTLVGSIPLLITLVYFQNTNGTLNFLVFQYLVQPLC-NSW-----SSVFFWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRVSTLLNP-ITEFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTYHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-TLITLFLLIIPIMTT---SSENYKT-SNYPLYVKTT-ISCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTMKLSMSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLMNLNAWDFQQIFMLNPD-NSSLPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFMQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFTTLVTINENNPFLTNSIKRLMIGSLFAGFIISNSIPPTTIPQMTMPSYLKMMALAVTVLGFILALEISNMTQNLK--FNYPSNTFKFSNMLGYFPTIMHRLAPYMNLMMSQKSASSLLDLIWLETILPKTTSLIQMKMSI--MVTNQKGLIKLYFLS---FLVTI--VISIVLF----------NFHE---- +>Spalax_carmeli_Mt_Carmel_blind_mole_rat +----MNENLFASFATPT-LMGLPIVIPIIMLPTLFFKTTN-KLINNRVTTAQQWLIKLITKQMMFTHSPKGRTWSLMLTSLIIFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPMWAGTVILGFRHKTKASLAHFLPQGTPIILIPMLVMIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLTT-INLPTASITFLILTMLTILELAVAMIQAYVFTLLVSLYLQDNTMPQLDTSTWSTVIMTSL-VTLFIILQLKLSLFNLTP-APSLK-QMKLNKT-HNP-W-DKKWTKIYLP-LS-LPLH----MFITRWLFSTNHKDIGTLYLMFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVVVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAVTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFIHWFPLFTGFSLSETWAKIHFAVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNVISSMGSFISLTAVMIMVFMVWEAFASKREVEAVELASTNLEWLHGCPPPYHTFEEPTYVKV-N--------MAYPLQYGLQDATSPIMEELMNFHDHTLMIVFLISSMVLYVITAMLTTRLTHTNTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSELKPGELRLLEVDNRVVLPVELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATITSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSSTMV----------MTHQTHAFHMVNPSPWPLTGALSAFLLTSGLIMWFHFNSFTLLTIATAGNILTMYQWWRDVVREGTFQGHHTPPVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGINPLNPIEVPLLNTAVLLASGVSITWAHHSLMEGKRNHMIQALLITIILGLYFTLLQASEYLEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLLTCLLRQLNFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKSHPLIKIINHSLIDLPTPSSISTWWNFGSLLGVCLGLQIITGLFLAMHYTSDTLTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGIYYGSYHFKETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVVVHLLFLHETGSSNPSGLDSNADKIPFHPYFTIKDTLGALMLTIILMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPMLHTSTQRSLTFRPISQLLFWMLVADLITLTWIGGQPVEHPFIIIGQVASILYFSIILILMPLAGLVENTIM---KL-------------------MNMLALLLPILVAMAFLTLVERKTLGYMQLRKGPNVVGPYGVLQPFADAMKLFTKEPLKPLTASLTLFIIAPTLALTLALSLWIPLPMPYPLLNLNLGALFILATSSLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLLSGSFSLLSVISSQELTWFLLPTWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFLGTVYNPHNPELFTLNFMLKTLILTTVFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISMPMTMASI-P-PYT--MNI-LALTIILLTIFVGSIITILSNHLILMWAGLEMSMLAIIPVLMFNSNPR-STEAATKYFLIQATASMILLLAIILNYHDLGIW--QFHHNTQFYIYSLVLIALMMKLGLAPFHFWVPEVTQGVPILSGLLLLTWQKIAPLAIMFHISYYLNTTMVPLS-ALMSVFIGGWGGLNQTQLRKILAYSSIAHMRWMVAVTMYNPTMMLLNLVIYMFLTTSMFITVYICTSTSISSF---TKMWNKSPLLISTTLIILMSLGGLPPLTGFLPKWMIIIELTKNNCIFMALSMTMMALLNFYFYTRLIYASSMTAFPTSNNMKTNT-HHQNNKKHPFL-------SPLIIISSLALPLSPLVSSLY---MN-LLITMMTNISLSMILVSVAFWLPQLNLYSDKASPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPIPWAIQYGNLTGVVLTTLGLLTILALGLMYEWFNKG--LEWTE-MTPVFFNLLLTFILSLLGALMFRSHLMSTLLCLEGMILSLFTMTSLITLNTNSMLSFIIPIIILVFAACEAAVGLALLVMVSNTYGTDYVQNLNLLQCMLKIILPSIMLLPLTWFTNNKMVWTNTTCYSLMISLISL-SLLHQDSTNSYNFS-TTFFSDPLSTPLVILTTWLLPLTLLASQNHLSKEQENYKKMYISLLTLLQVFLIMTFTATELMLFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLISLINFNNTFGTLNLVLLSLKQPALS-QSW-----SNHILWLAFMLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISILLDM-VNKTMAYPFIMLSLWGMVMTS--SICMRQTDLKSLIAYSSVSHMALVIVAVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERTHSRTMMLAQGLQTIFPLMGVWWMLGSLANLALPPSINLIGELLIITSSFSWSNLSILMMGTNMIMTAAYTFYMLITSQRGKLTNHTKFLPPTQTRESTIMSLHIIPIVLISINPKLILGLP-------MNINVSM-NLLILTTLTTPLLLS---LTNKYNS-NSYPKHVINS-IKLSFLFSLLPLLTFLSNNNELITSNWHWMTINSIKLAMSFKFDYFSYLFIPVALFVTWSITEFSSWYMHSDPNLNRFMKYLLMFLMTMIILVSANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLILSMAWFTIHTNSWELQQIFILTTN-TDILPLLGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLMIRFYPLTQNNQTILTLTLCLGAMTTLFTAMCALTQNDIKKIVAFSTSSQLG--LMFVTLGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPFTSSCLTIGSLALTGMPFLTGFYSKDLIIETLNTSNTNAWALLITLIATS-MTAVYSTRIIFFVVMSKPHFTPTITINENNPQLINPISRLALGSILAGFMITSNLPPTNIPTMTMPLPLKLMAITISILGFTIAMDLNNLTSTLT--HKSPTTTHKFTTLLGFFPSIIHRLLPIKSLTMSQNMASNLMDLIWLEKAIPKMIANTQMTASI--ITSNQKGLIKLYSLS---FLMNI--TIISLLTLT--------YYLE---- +>Rattus_norvegicus_Norway_rat +----MNENLFASFITPT-MMGLPIVVTIIMFPSILFPSSE-RLISNRLHSFQHWLIKLIIKQMMLIHTPKGRTWALMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVILGFRHKLKNSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMD-ISPPTATITFIILLLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISSM-ATLFILFQLKISSQTFPA-PPSPK-TMATEKT-NNP-W-ESKWTKTYLP-LS-LPPQ----MLVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLNDTWAKAHFAIMFVGVNMTFFPQHFLGLAGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLVMIFMIWEAFASKREVLSISYSSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAYPFQLGLQDATSPIMEELTNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHYNSTILLSLGLLTNILTMYQWWRDIIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMNQALLITILLGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLFKIINHSFIDLPAPSNISSWWNFGSLLGVCLMVQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYTFLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGVFMLLLFLMTLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALILSILILAFLPFLHTSKQRSLTFRPITQILYWILVANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIVEDKML---KWN-------MY--------FINILTLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPTLSLTLALSLWIPLPMPHPLINLNLGMLFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQMLITTQEHIWLLIPAWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTSIVFLGPLYHINYPELYSTSFMTETLLLSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWYISLPIFLAGI-P-PYT--MNP-ITLIIIYFTILMGPVITMSSSNLLLMWVGLEMSLLAIIPLLANKKSPR-STEAATKYFLTQATASMIILLVIILNYKQSGMW--TLQQQTNNMLLNMMLISLAMKLGLAPFHYWLPEVTQGIPLHIGLILLTWQKIAPLSILYQFYQLLNPTITTIL-AISSVFVGAWGGLNQTQTRKIMAYSSIAHMGWMTAILPYNPNLTLLNLTIYILLTVPMFITLMTNSATTINTL---SLAWNKTPMILTMTSIILLSLGGLPPLTGFLPKWAIISELLKNNCSTLSTLMAIMALLSLFFYTRLIYSMSLTMFPTNNNSKMISHHHQNPKHNFIL-------PTLTVLSTLTLPLSSQLIT-----MN-LLIIITINITLSFILISIAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTTNTTTMMATAFILVTILALGLSYEWTQKG--LEWTE-MTSAFLNLTMAFTLSLLGTFMFRSHLMSTLLCLEGMMLSLFVMTSTSTLNSNSMISMTIPITILVFAACEAAVGLALLVKISNTYGTDYVQNLNLLQCMLKIIFPSIMLLPLTWLSANKKIWTNVTSYSFLVSLLSL-SLLWQNDENYLNFS-VMFSSDPLSTPLIILTTWLLPLMMLASQNHMKKENMMHQKLYISMLISLQILLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALISIQNSMGTLNFLILSLTTHPLP-STW-----SNTILWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRVSIILDP-LTKSLAYPFIILSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAIMIQTPWSFMGATMLMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMIFPLMATWWLLASLANLALPPLINLMGELFIVMATFSWSNPSIILMATNIVITGIYSMYMIITTQRGKLTSHMNNLQPSHTRELTLMALHIIPLMLLTINPKLITGLTM------MNMMTSS-ILMILILLTTPIIIS---MTNLPKL-IDFPSYATSS-IKFSFLLSLLPLLLFFHHNTEYMITNWHWLTINSIKLTMSFKIDYFSILFLSVALFVTWSIMQFSSWYMHSDPHINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRVGDIGFILAMTWFCLNMNSWELQQIFLT-NT-NNLVPLTGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFHPLTSNNSTIMTAMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGNMMKAMPFTSSCLIIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALMITLIATS-MTAVYSMRIIYFVTMTKPRYSPLITINENNPNLINPIKRLALGSILAGFLISLNIPPTNIQILTMPWHLKMTALLITILGFAIALELNNLTLNLS--MSKPTKLSSFSTSLGYYPPIMHRIIPQKTLNSSYKLSLNLLDLIWLEKTIPKSTSITQTQLSK--MMSNQKGLIKLYFLS---FLITI--SLIFILHTL---------NPEWFQ- +>Avahi_laniger_woolly_lemur +----MNENLFASFATPM-IMGFPIVILIIALPSILFPSPT-RLIANRLTSLQQWLIRLTLKQLMTMHNVKGRTWSLMLTSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAAAVMTGFRHKTKMSFAHLLPQGTPILLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLTLTS-VGPTTASITFTILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSAWPITVISMI-LTLFIVFQLKVLKFGYPS-NPEPK-MHSKNKH-ANP-W-EMKWTKIYLP-LS-LPQ-----MFINRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMLEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAVSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYALNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSIGSFISLTAVMLMIFMIWEAFASKREVLAMELTATNLEWLHGCPPPYHTFEEPTFVKL-P--------MAYPVQLGFQDAASPIMEELLYFHDHTLMIVFLISSLVLYIISLMLTTELTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEITTPSLTLKTMGHQWYWSYEYTDYKDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPTEMSIRMLISSEDVLHSWTVPSLGVKTDAIPGRLNQATLMTSRPGIYYGQCSEICGANHSFMPIVLELIPLKYFEDWLLSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHYNSTTLLTLGLSTNLLTMCQWWRDIVRESTFQGHHTQPVQKGLRYGMILFIVSEIFFFAGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTAVLLASGVSITWAHHDLMEGNRTHMLQALLITISLGIYFTLLQASEYFETTFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNTRKIHPLMKIMNNSFIDLPTPSNISSWWNFGSLLGACLALQIVTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFLCLFIHVGRGLYYGSFTLSETWNIGITLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAAIHLLFLHETGSNNPLGISSNPDKIPFHPYYVTKDLLGAVLLILLLMTLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALISSILILAIIPLLQTTKQQSMMFRPLSQCLFWILVADLCTLTWIGGQPVENPFISIGQTASILYFSLILVIMPTVSLVENKML---KW--------MF--------MINLMLLIIPILLAMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPLPYPLVNMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEFMWLIIPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPHAPQMYSTTFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSSI-P-PQM--MNP-TALMPISMTIFMGTTITMISSHWLLIWMGLEINMLAIIPILTKKNNPR-SVEAATKYFLTQATASMLLMMTITINAMYTGQW--NITNIYDPLTSTTIIFALTMKLGMTPFHFWVPEVTQGITLTAGMLLLTWQKLAPISIMLQIHPSMNLDMLLTL-ALLSTLIGGWGGLNQTQLRKILAYSSIAHMGWMVVVLMYCPPLTMLNLLVYLMLTTTMFTMLNVYKSTTTLTL---STLWNKNPTITLMILISLLSLGGLPPLTGFLPKWMIVQELTKNNNILLATVMVMMALLNLYFYMRLVYSTSLTMFPVSNNTKMKW-QHNPKKPTLLL-------PPLIALSTLSLPLSPILLTLN---MN-LSLTFMTDAVLALLLVMIAFWLPQLNIYTEKYSSYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQMTNLKLMLTMALLLISILAAGLAYEWSQKG--LEWEE-MPSIFTNIILAFATALLGTLVFRSHLMSSLLCLEGMMLSLFTLSTLIILNMHLTMSFMMPILLLVFAACEAAIGLALLVMVSNTYGLDYIKNLSLLQCMLKFIIPTIMLLPVTWYSNNSMIWINTTSHSLMISFMGL-FLLNYPSDSNNNFS-LSFSSDPLSSPLLMLTMWLLPLMIMASQHHLAKEPWFRKKSYLSLLITLQMFLIMTFTATELILFYILFEATLIPTLIVITRWGNQTERLSAGLYFLFYTLVGSLPLLLALTYLQSSMGSLNLLTTNLWLKEMP-NSW-----STNLLWLACTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISMFLDP-TTKSMAYPFLMLCLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILVQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMATWWLLASLTNLALPPSINLIGELLVTITSFSWSNITVILIGLNMLITALYSLYMLITTQRGKLTYHLHNLSPSLTRENTLMSMHMLPLLLLTLNPKIILGSTL------MNLLSSF-TLITLAILIMPIITD---LMNARKD-LPYPSYVKST-ITLAFITSLVPTTLFMFSGQEVIISNWHWMTIQTMKLTLSFKLDYFSILFMPVALFVTWSIMEFSMWYMNTDPKIDQFSKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFILSMMWFLLYSNSWEFQQMFVLDKN-PHMIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLVENNSPIQTMALCLGAITTLFTATCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGTIIHNLNDEQDIRKMGGLFKTMPLTSSSLIIGSLALTGMPFLTGFYSKDLIIESVNVSNTNAWALLVTLIATS-LTSIYSARIIFYVLTGQPRFNTTATINENNPLLINSIKRLAFGSIFAGFLLSNNVMPMNAPQTTMPTYLKMTALMISITGFALAMELNLMTKNLK--LKSPSNTLKFSGLLGFFPTTMHRLMPSLNLTMSQKAASVLLDLTWLEKTMPKNVSQLQMMTSI--ALSSQKGLIKSYFAA---LLISM--LLITLLIT----------------- +>Rattus_rattus_black_rat +----MNENLFASFITPT-VMGLPIVVTIIMFPSILFPSSE-RLISNRLHTFQHWLIKLILKQMMLIHTPKGRTWALMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVILGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGAALVLMN-ISPPTATITFIILLLLTMLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISSM-ITLFILFQLKISSQTFPT-APSPK-IMATEKT-SNP-W-ESKWTKIYLP-LS-LPQQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVLVMIFMIWEAFASKREVLSVSYSSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAMSALLLTSGLVMWFHYNSTTLLSLGLLANILTMYQWWRDIIREGTYQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMNQALLITILLGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPAPSNISSWWNFGSLLGVCLMVQIITGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGMYYGSYTFLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGVFMLLLFLMTLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILAFLPFLHTSKQRSLTFRPITQILYWILVANLFILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIEDKML---KWN-------MY--------FINILTLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPTLSLTLALSLWVPLPMPHPLINLNLSMLFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQMLITTQEHIWLLIPAWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTSIVFLGPLYYINHPELYSINFMTETLLLSTAFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPISLAGI-P-PHT--MNP-ITLIIIYFTIFMGPAITMSSSNLLLMWVGLEMSLLAITPLLTNKKSPR-STEAATKYFLTQATASMIILLAIVLNYKQSGMW--TFQQQTNNMLLNMMLISLSMKLGLAPFHYWLPEVTQGIPMHIGLILLTWQKIAPLSMLYQIYQFLNPTITTIL-AISSVLIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPHNPNLTLLNLTIYILLTIPMFTTLMMSSATSINSL---SLAWDKTPMILAMTSIILLSLGGLPPLTGFLPKWAIISELLKNNCSILSTLMAIMALLNLFFYARLIYSMSLTMFPTNNNSKMIS-HHPNLKYNFIL-------PTLTVLSTLTLPLSSQLMT-----MN-LFIIITINTTLSLILASIAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTANIATMTATAFILVTILALGLSYEWTQKG--LEWTE-MTSAFLNLTLAFMMSLLGTFMFRSHLMSTLLCLEGMMLSLFIMTSTSTLNSNSMISMTIPITILVFAACEAAVGLALLVKISNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLTWLSNNKKTWTNVTSYSFLVSLASL-SLLWQNDENYLNFS-IMFSSDPLSTPLIILTTWLLPLMMLASQNHMKKENPMHQKLYISMLISLQILLIMTFSATELILFYILFEATLIPTLIIITRWGNQAERLNAGIYFLFYTLIGSIPLLIALISIQNSMGTLNFLVLSLTTQPLP-PTW-----SNNILWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRVSMILDP-LTKSLAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAIMIQTPWSFMGATMLMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMIFPLMATWWLLASLANLALPPLINLMGELFIVMATFSWSSPSITLMATNIVITGMYSMYMIITTQRGKLTSHMNNLQPSHTRELTLMALHIIPLMLLTINPKLITGLTM------MNMMTSS-ILMILILLTTPIIIS---MTNLPKF-IDFPLYATSS-IKFSFFLSLLPLLLFFYYNTEYMITNWHWLTINSIKLTMSFKIDYFSILFLSVALFVTWSIMQFSSWYMHSDPYINRFIKYLMMFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRVGDVGFILAMTWFCLNTNSWELQQIFLT-NT-NNLVPLTGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFHPLTSNNSTIMTAMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGNMMKVMPFTSSCLIIGSLALTGMPFLTGFYSKDLIIETINTCNTNAWALMITLIATS-MTAVYSMRIIYFVTMTKPRYSPLITINENNPNLINPIKRLALGSIMAGFLISLNIPPTNIQILTMPWYLKLTALLITILGFAIALELNNLTLNLS--MNKTTKLSSFSTSLGYFPSIMHRMIPQKTLNSSYKVSLNLLDLTWLEKTIPKSTSITQTHLSK--MMTNQKGLVKLYFLS---FLITI--SLIFILHML---------NPEWFQ- +>Chlorocebus_cynosuros_malbrouck +----MNENLFTSFATPM-ILDQPATIPIIMFPMLLIPTSK-HLINNRLITIQRNLVLFTLKQMMMTHNAKGRTWSLMLMSLITFITTTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVIMGLRFKTESSLAHLLPQGTPTLLIPMLVMIETISLVIQPVALAVRLTANITAGHLLMHLIGNATLTLLT-ISPPATSLVFTLLTLLTILEIAVALIQAYVFTLLVSLYLHNNTMPQLDTSTWFIIITTTL-PTLYLITQLKLLNMHYYQ-PPQQK-NSHKQAP-NNH-W-QLKWTKIYLP-HS-QLQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGIMGTALSLLIRAELGQPGSLLGSDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTMIEAGAGTGWTVYPPLAGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPTGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMTWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSAAMLWALGFIFLFTMGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSIGSFISLVAVILMIYMIWEAFASKRKVSLTEQSPTNLEWLNGCPPPYHTFEEPAYVKL-NEKGGSRTPMAHPVQLGLQDATSPVMEELITFHDYAFMTISLISFLVLYALSSTLTTKLTNTNITDAQEMETTWTILPAVILILIALPSLRILYLTDEVNNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMMPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQSHAYHMVKPSPWPLAGALSALLTTSGLTMWFHFYSTTLLMLGLLTTTLTLHQWWRDVVRESTYQGHHTTPVQKNLRYGMVLFIISEIFFFTGFFWAFYHSSLAPTPYLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHYSLMNNNRKQTTQALLITILLGIYFTLLQISEYFEAPFTISDGIYGSTFFIATGFHGLHVIIGSTFLLICLIRQLLYHFTPNHHFGFEAAAWYWHFVDVVWLLLYISIYWWGS--MTPMRKSNPIMKMINHSLIDLPTPSNISMWWNFGSLLAFCLILQIITGLFLAMHYSPDTSSAFSSIAHITRDVNHGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLLKTWTTGIMLLFLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGYSIGNPTLSRFFTLHFILPFIITALTTVHLLFLHETGSNNPCGISSDSDKIAFHPYYTIKDILGLILLLFTLTTLTLLSPDLPNDPDNYIPADPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALFLSILILSIIPMLHNSKQQSMMFRPLSQFLFWLLIATLLTLTWIGSQPVSQPFILIGQLASMTYFTTILILMPLTSLIENNLL---KWT-------MT--------TANLLLLAASTLIAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTNMLYTIAPALAFSIALLLWTPLPMPNPLINFNLGLLFILAMSSLTAHSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSILLTSGSFNLNMLITTQEHLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFLGTFYPIHSPELFTTCFTTKTLLLTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLAFLMWNILTPITISSI-P-PQT--MNP-LAQLTIYTTMITGTLTTLLSSHWFLAWAGLEMNMLAFIPILIKKTNPR-STEAATKYFLMQSTASMILMMAITLNNLLSGHW--MMTSTTNQLPSLMMTAALAMKLGMAPFHFWIPEVTQGTPLTPGLLLLTWQKLAPISIMYQIHPSINTSALMTL-STLSIMTGSWGGLNQTQLRKIMGYSSITHMGWMMMTLTYNPTITTLYLTTYIALTTTMFLFLNLNSNTTTLTL---SLTWNKSPQLMPLTMFTLMSLGGLPPLTGFLPKWMTIQELAMNNNFIIPSIMVTMTLLNLYFYMRLIYTVSVSLFPTPNNTKMSW-QLENMKPTPLT-------PTLTIISTLLLPITPLILTVP---MN-LVLALTINTLLTSLLMIIMFWLPQLNSYAEKTDPYECGFDPLNPARIPFSMKFFLIAITFLLFDLEIALLLSLPWALQTTNLPMMTKSSITLIIILTLSLAYEWSQKG--LDWAE-MSPIFINITLAFTISLLGMLVYRSHLMASLLCLEGMMMSLFIMIALMASNTHSSLANITPITLLVFAACETAVGLALLVSISNTYGLDYIHNLSLLQCMLKMIIPTTMLLPMTWFSTNNMIWINLTMHSLIISLIPL-LFFNQTNNNLLNHS-TYLSSDPLTTPLLTLTAWLLPLMMMASQYHLCNEPPSQKKLYLSTMIFLQITLILTFMATELILFYILFETTLIPTLIIITKWGNQAERLNASTYFLFYTLTGSLPLLIMLTYTYNNTGSLNIMLLTLTDQKLT-TTW-----SHNLVWLACTMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEHMAYPFLMLALWGMIMTS--SICLRQTDLKSLIAYSSVSHMSLVITASLIQTPWSFSGAITLMIAHGLTSSMLFCLANSNYERTHSRIMMLSRGLQTLLPLMTFWWFTANLTNLALPPTINLIGELFVIMASFSWSHITIVLTGLNMLITALYSLHMFITMQRGKLTHHMINMKPPFTRENTLMFMHLTPIILLSLNPNIILGFTS--------MHTSI-MMATLASLTLPIITT---FINPNKK-RSYPNHVKTT-MMYAFITSLLPTTLYISLDQETTIWSWHWMMTQTLDLTLSFKLDYFSVMFTPIALFITWSIMEFSLWYMSSDPNINQFFKYLLIFLITMLILTTANNLFQLFIGWEGVGIMSFLLIGWWHSRTDANTAAIQAILYNRIGDIGFILAMAYFLLHYNSWDMQQMLTLNSN-SNPLPLVGLLLAAMGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVYLLIRFHPLMENNTLLQSLTLCLGAITTTFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLLIGNLALTGMPFLTGFYSKDLIIEATNTSYTNAWALFITLIATS-LTSAYSTRIILLTMTGSPRFPTLMNINENNPTLLNPIKRLTTGSIITGFLITYNIPPTSLPQPTMPHYLKLSALYATILGFLMTLDLISMTNKLK--MNNPSQMFKFSNMLGYFPTTIHRMIPYQNLLMSQNLALLLLDSMWLEKSMPKMVVHAHTTTSK--TITTQKGMIKLYSLS---FLIPL--TLTLLLMM----------------- +>Platanista_minor_Indus_River_dolphin +----MNENLFTSFTVPM-ALGIPITTLIIMFPSILFPTPN-RLINNRTISIQQWLIKLASKQIMNLHNLKGQTWSLMLTSLLLFIASTNLLGMFPHSFTPTTQLSMNIGMALPLWAGTIITGFRHKTKLSLAHLLPQGTPTFLIPMLVMIETISLLIQPVALAVRLTANITAGHLLMHLIGQTTLALMM-ISPFTALTTFVILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLLTITSML-LTLFTLFQLKISKHLYYP-SPKLT-TTKLQKQ-QTP-W-NTTWTKIYLP-PS-LFQ-----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMLEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGLSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWAKIHFMIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFIIWEAFASKREILTVTLTTTNLEWLNGCPPPYHTFEEPVYINP-K--------MAYPLQLGFRDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMNAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMVLPMETTIRLLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSMRPGLFFGQCSEICGSNHSFMPIVLELVPLDKFEKWSSSML----------MTHQTHPYHMVNPSPWPLTGALSALLMTSGLVMWFHFNSTILLTLSPITMAMTMFQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIYPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIHALSITIMLGLYFTLLQMSEYYEAPFTISDGIYGSTFFMATGFHGFHVIIGSTFLIVCLLRQMKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNTFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLYAHVGRALYYGSYTFQETWNIGILLLFTLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGSTLVEWIWGGFSVDKATLTRFFAFHFILPFIILTLAVIHLLFLHETGSNNPTGIPSNTDKIPFHPYYTIKDTLGALILILTSLTLTLFTPDLLGDPDNYTPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLAFIPMLHTSKQRSMMFRPFSQLLFWMLVADFLTLTWIGGQPVEHPYMLPGQLASILYFLLILVLMPTASLIENKLL---KW--------MF--------MINILMLILPILLAVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFITAPILALTLALTMWCPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEQMWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIMMNMFTTILFLGAFHNPYMPELCTTNLIIKTLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWCIALPITTASI-P-PQT--MNP-FISTITLMTLILSTTTVMISSHWLFAWIGFEMNMMAMIPIMMKNPNPR-ATEASTKYFLTQTTASMLLMMAIIINSMYSGQW--TIMKLFNPTASTLMATAMAIKLGLAPFHFWVPEVAQGIPLTSGLILLTWQKIAPLSILYQISPSINLQLMLTM-SMLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILLYNPSLTLLNLLIYITMTFTMFMLLIQNSTTTTLLL---SQTWNKAPISTTFTALTLLSMGGLPPLSGFMPKWMIIQELTKNNALIMPTFMAITALLNLYFYMRLTYSTALTLFPSTNNMKMKW-QFQPTKRMTLL-------PTAIVMSTMLLPLTPMISTLL---MN-FLLTLLTNTTLAMLLMFIAFWLPQPNMYAEKTSPYECGFDPTSSARLPFSMKFFLVAITFLIFDLEIALLLPLPWAIQTNNLNTMLILTLSLISLLATSLAYEWSQKG--LEWAE-MSLINMNLMLAFTMSLTGLLMYRHHLMSALLCLEGMMLSLFTLTTLTILNTHFTLTNMIPIILLVFAACEAAIGLALLVMISSTYGTDYVQSLNLLQCMLKFLIPTIMLMPLTWFSKSNLIWINSTTHSLLISFTSL-LLLNQFNDNSLNYS-LMFFSDSLSTPLLMLTMWLLPLMLMASQSHLLKEPLARKKLYITMLITLQTTLIMTFTATELILFYIMFEATLIPTLILITRWGNQPERLNAGLYFLFYTLMGSLPLLVALTYLQNTTGSLNFLLLQYWTQPLS-PSW-----SNTLTWLASMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITLTLNP-LTEHMTYPFLILSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVITAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRIMILARGLQTFLPLMASWWLLASLTNLALPPTINLIGELLVITSTFSWSNPTIFLMGMNIVITALYSLYMLITTQRGKHTHHINNLIPSFTREHALMALHILPLLLLSLKPKIILGPLY------MNLFTSS-ILLTLLILTIPIMVT---NTNLYKS-NKYQHYMKNV-ITCAFITSLIPTMMYLHTNQETLISNWHWTTIQTLKLTLSFKMDYFSLTFMPVALFITWSIMEFSMWYMHSDPHINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTNANTAALQAILYNRIGDIGFLVSMTWFLSNMNTWDLQQIFMLNQH-PSNTPLLGLVLAAAGKSAQFGLHPWVPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKPIQTMILSLGALTTLFTALCTLTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHTFFKAMLFLCSGSIIHNLNNEQDIWKTGGLFKALPFTTTALITGCLALTGMPFLTGFYSKDPIIEAATSSYTNAWAVLLNLMATYLLTAIYSTRIIFFT-LGQPHFSPSTNINENNPLLINPIKSLLTGSIFTGFVLSNNIPPMTIPLMTMPLHLKMTALTMTTLGFILAFEINLNTRTLK--FTYSSHPTKFSTLLGYFSTIMHRLPPHLNLIMSQKLATSLLELTWLETILPKTMTHAQLKASM--LTSNQQGLIKLYFLS---FLITI--TLTMLLL----------NCPEWSP- +>Castor_fiber_Eurasian_beaver +----MNENLFTSFITPT-MMGLPIVTLVILFPSIMLPTPN-RLINNRLTSIQQWAAKLITKQMMTMQNSKGRTWSLMLMSLIIFIGSTNLLGLFPYSFTPTTQLSMNLGMAIPLWTGTVILGFRHKMKSSLAHFLPQGTPTPLIPMLIIIETISLFIQPVALAVRLTANITAGHLLIHLISGATLALLT-ISPTTALMTFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTITSMI-LTLFIIFQLKVKAFSFSP-NPTPK-NVESMKQ-KSP-W-EKKWTKIYLP-LS-LPPL----MFVNRWLFSTNHKDIGTLYLMFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDQTWAKIHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTAWNTVSSVGSFISLTAVIIMVFMVWEAFASKREVGVVELTTTNLEWLHGCPPPYHTFEEPTYVKT-H--------MAHPLQLGLQDATSPIMEELLNFHDHTLMIVYLISSLVLYIISLMLTTKLTHTNTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSELKPGELRLLEVDNRVVLPMEMPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKYFENWSLSML----------MTHQIHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSMPLLMLGLLTNSLTMYQWWRDVVREGTFQGHHTPVVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGINPLDPLDVPLLNTSVLLASGVSITWAHHSLMEGNRKNMIQALSITILLGIYFTLLQASEYFETSFTISDGIYGSTFFMATGFHGLHVIIGSTFLSVCLARQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLTKIINHSFIDLPTPSNISAWWNFGSLLGICLILQIATGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHAGRGIYYGSYTFTETWNIGIILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPLGINSDSDKIPFHPYYTIKDSFGFLLLLTPLLALVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALMLSILVLAAFPLLHTSKQRSLMFRPISQCLFWTLTADLLTLTWIGGQPVEPPFIIIGQMASILYFSIILVLMPTASLIENKML---KW--------MF--------IMNVLTLTIPILLAMAFLTLVERKLLGYMQLRKGPNVVGPYGILQPFADALKLFTKEPMRPLASSPLLFSIAPTLALTLALIMWIPFPMPQPLINMNFGILFILATSSLSVYAILWSGWSSNSKYALIGALRAVAQTISYEVSLAIIVLSVMLMNGSFTMSSLITTQEHIWLIIPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIIMMNALTTIMFLGAFHSPLAPELYTINFTIKTLCLTMLFLWIRASYPRFRYDQLMHLLWKNFLPITLAACMLYMSIPVATSSI-P-PQM--MNP-IAKLTIYPTMIMGTMITMTSSHWLTMWAGLEINMLAFIPLLINKGSPR-STEAATKYFMTQATASMLLLMAIVINMLYSGQW--SITHMQNHTTSFMALVALAMKLGLAPFHLWVPEVTQGATLMSGMLLLTWQKLAPISILYQLAPSISHQLLMPM-ALLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMMAIISYSSMAFMLNLMTYILLTITMFTMINYNTNTNTLAL---AHSWNVTPAITPMLLISLLSLGGLPPLTGFLPKWIIIDELTKNDLILMPTIMAMLALLNLYFYMRLIYSTTLTLFPTTSTTKMKW-RHPNNKPSILL-------PPLFIITTMALPLTPIMYILN---MN-LIIALTLNSLLAIFLITIAFWIPQINIYNEKSNPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWALQTNNLYPVILMALALIIVLSLGLAYEWSQKG--LEWNE-MSPILINLFLAFLASLLGALIYRSHLMSSLLCLEGMMLSIFITTTLITLNFNITLSFMLPIIILVFAACEAAVGLALLVTMSNTYGTDYVQNLNLLQCMLKIIMPTIMLIPMTWFSKNNMIWINSTVHSLLISMLCL-LTLNQSNENSLNFS-LLFSSDSLSAPLLILTAWLLPLMIMASQQHMNKEPVGRKKMYITMLVLLQTLLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYLQNSLGSLNLHILNNYSEQLN-LSW-----SNDLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITALLSP-ITNHMMYPFMLLSLWGMLMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQSPWSFMGATALMVAHGLTSSVLFCLANTNYERVHSRTMLLARGLQTMLPLMALWWLTASLTNLALPPTINLIGELMIIASSFSWSNFTILLMGANTLITALYTLYMLTTTQRGKPAYHINNIHPSFTRENSLVFLHLLPLLLLSLNPKIILGTMF------MNVLALS-MIMTFIILMYPILAS---LTNLYKN-KNYSEYTKTS-VKLAFITSMIPMIMFIHLGNETIVSNWHWLTIHTMKISLSLKLDYFSLLFVPVALFVTWSIMEFSLWYMHSDPNINQFLKYLLFFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTEANTSALQAILYNRIGDIGFILSMAWFSMYSNSWDLQQLFM-DPK-TTTIPLLGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPILESNRLITSMMLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGINQPYLSFLHICNHAFFKAMLFMCSGSIIHSLNNEQDIRKMGGLAKAMPFTTSSLVVGSLALTGMPFLTGFYSKDLIIESANTSYINAWALLITLIATS-LTAAYSTRIIFFALLGQPRFHPLININENNPQLTNSIKRLLLGSIFAGFIISNSITPMNNPTLTMPLHLKLMALGVTILGFIIAMELNNMTYNLK--LNLNSDTKSFSTMLGFFPTIMHRTSPKNTLLLSQKAASTLLDTIWTEKITPKLMANMQIKASI--TVSNQKGMVKLYFLS---FLLSM--ALALTIII----------------- +>Heterocephalus_glaber_naked_mole-rat +----MNENLFAPFSTPT-LMGLPIIIIIMMFPSMLLSRPN-RLINNRLTSLQQWAIQMTLKQLMTMHNTKGRSWTLMLTSLILFISSTNLLGLLPYTFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKKSLAHLLPQGTPNPLIPMLVLIETISLFIQPVALAIRLTANITAGHLLMHLISKAVLTLIS-INITTALITFTILILLTMLEFAVAMIQAYVFTLLVSLYLNDNTMPQLDTSTWFMMITTMM-ITLFIMFQLKMLNYHYPN-DIKTK-STLRTKQ-HTP-W-EKKWTKIYLP-PS--PHQH---MFINRWLFSTNHKDIGTLYLLFGAWAGMTGTALSILIRTELGQPGTLLGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGDIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDPTWAKIQFFVMFIGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTLSSMGSLISLTAVMMMVFMIWEAFASKREVLMTEMTSTNLEWIHGCPPPFHTFEEPTYIKM----------MPYPHQLGFQDATSPIMEELLYFHDHTLMIVFLISSLVLYTISTMLSTKLTHTNTMNAQEIEMVWTILPAMILILIALPSLRILYMIDEVNDPSLTVKTLGHQWYWSYEYTDYEELCFDSYMVPSTDLKPGELRLLEVDNRVVLPMKTPVRMLISSEDVLHSWAIPSLGLKTDAVPGRLNQTTLMSSRPGLFYGQCSEICGSNHSFMPIVIEMVPLKTFESWSSSMT----------MNHQTHAFHMVNPSPWPLTGALSALLITSGLTMWFHFNSMTLMLLGLLACIMTMYQWWRDIVREGTYQGHHTPTVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPELGGHWPPAGINPLNPTEVPLLNTAILLASGVSITWAHHSLMEGHRKHVIQSLLTTIILGIYFTLLQASEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICLIRQLLFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPTPSSISYWWNFGSLLGACLILQIITGLFLSMHYTADTATAFSSVAHICRDVNYGWLIRYLHANGASMFFICLYLHVGRGMYYGSYMFMETWNIGIILLLSVMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGPTLVEWIWGGFAVDKATLTRFFAFHFILPFIITALTMVHLLFLHETGSNNPSGINSDSDKIPFHPYYSFKDFMGLQIMLLILLTLTLFHPDLLGDPDNYTPANPMSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILVALPFLHTSKQRSMMFRPISQCLFWTFISTLLTLTWIGSQPVEYPYIIIGQLASILYFLIILILMPLAGLVENKMM---K---------MH--------IINTLLLLVPILLAMAYLTLMERKLLGYMQLRKGPNIVGPYGILQPIADALKLFIKEPLKPSASSISLFIISPMLALTLALSMWIPLPMPHPLINMNLGILFILATSSLAVYSILWSGWASNSKYALLGALRAVAQTISYEVSLAIILLSVLLLSGSFTLGTLMETQKYTWLILPTWPLAMMWFISTLAETNRAPFDLAEGESELVSGFNVEYAAGPFALFFMAEYINIIMMNALTTIIFISTSPMSTNPENFTMYFTIKTLMLTSLFLWIRASYPRFRYDQLMHLLWKNFLPMSLAMCMWHISFPIGLFGT-P-PQTT-MNL-ISNSVIYLTLISGTLITLTSSHWLLMWAGLEMSMFAMIPILTHKTSPR-STEAATKYFLVQATASMMFMMTIIYSVALSGQW--AIMHSQNQTISSILMLSLMMKLGLAPFHLWVPEVTQGANLWSGMILLTWQKIAPLSIMYQAYSSANQTMIISF-SLLSILLGGWGGLNQTQLRKILAYSSISHMGWMTTVMCFNPSIMHLNLLIYIMLTLSMFSMLSINTNTTTLSL---SHLWNISPILANTILIILLSLGGLPPLTGFMPKWMIITEMTKNQSIILPTLMAMMALLNLFFYMRLAYSTSLTLFPSTNNLKMKW-YIQNTKMPYLL-------PPLIIVSTLMLPLSPMMTTLE---MN-MTISLLMNFSLASILMLIAFWLPQMDAYAEKLSPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWASQTNNLTLMLTVSLMLISVLALGLFYEWSQKG--LEWDK-MSAIYMNMTIAFMASLMGMMMYRSHMMSSLLCLEGMMLSMFVMASLITLNSHYTLSYTIPLVLLVFSACEAAMGLALLVLVSNTYGSDYVQNLNLLRCMLKIILPTIMLIPVTWLSKNSLLWINTSCHSLLIALISL-PTLNKLDINSHNFS-TNFFSDSLSSPLVNLTVWLLPLMIIASQHHMKNEPAVRKKLYLSLLITLQALLIMTFTTSEMMMFYILFEATLIPTLIIITRWGNQAERMKAGLYFLFYTLTGSLPLLVALTYLKNYLGSLNFMLFSYKASPLL-PTW-----SNSMLWLACIMAFMVKFPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRISQLLEP-LTTSMSYPFILLSLWGMVMTS--SICLRQTDLKSLIAYSSISHMALVITAILIQTPWSYMGATTLMIAHGLTSSLLFCLANSNYERTHSRTMILARGLQTILPLMALWWLLASFTNLALPPSINLVGELLIITSTFSWSNFTIILTGMNVLITALYTLYMLISTQRGTPPHHIINLPPSFTRENTLMTLHLLPLLLMTLNPKIIMGNLF------MNLYISS-FIMSLLLLTTPIPLS---SINFPKN-TSYPSYVKSI-ISLSFFISLIPTTMLLLSNQEAVISNWNWMHIQTLSINMSFKLDYFSVTFMSVALFVTWSIMEFSMWYMHSDPDMNKFIKYLLLFLITMMILVTANNAMQLFIGWEGVGIMSFLLIGWWLSRSDANTAALQAILYNRIGDIGFIISMVWFMTNLSSWEMQQLFIMQDE-MNYIPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFYPLIQHNQTILTMSMCLGATTTLFTALCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICMHAFFKAMLFMCAGSIIHNLNNEQDIRKMGGLFKMLPFTSSSLIIGSLALTGMPFLTGFYSKDLIIESANSSYINAWALLITLIATS-LTAVYSSRIVFYALLDHPRSTTTLNINENNPLLINPIKRLAMGSILAGFIISNNIPPTSIPQMTMPTYIKLSTLMVTALGLMTAMELIIMSHYLK--NKYPNKLFNFSNMLGYFTPTAHRFMPYKKLMMSQNLASSSMDAIWLEKSAPKNVSDIQYTASM--FTSNQTGLIKLYFLS---FLLSF--MVALILST----------------- +>Episoriculus_fumidus_Taiwan_brown-toothed_shrew +----MNENLFASFATPT-MMGLPIVILIILFPSIMFPAPN-RLINNRLVALQQWLIQLISKQMMTIHNQKGQTWTLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLMS-ISPITAFITFIILVMLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIMSML-LTLFIVFQLKVSKYLYPM-NPELK-SLKTLKH-NNP-W-ETKWTKIYSP-LS-LPQQ----MFITRWLFSTNHKDIGTLYMVFGAWAGMAGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMLGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGSINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIAAFVHWFPLFTGYTLSSTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNTVSSMGSFISLTAVVIMVFMVWEAFASKREVTSVELTTTNIEWLYGCPPPYHTFEEPVYVNA-K--------MAYPFQMGLQDATSPIMEELMNFHDHALMIVFLISTLVLYIISSMLTTKLTHTSTMDAQAVETIWTILPAIILILIALPSLRILYMMDEINNPTLTVKTVGHQWYWSYEYTDYDELNFDSYMIPTTELKPGDLRLLEVDNRAVLPMEMTVRVLITSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICGSNHSFMPIVLELVPLKVFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSTVLLSLGLMTNTLTMYQWWRDIIREGTFQGHHTPIVQKGLRYGMILFIISEIFFFAGFFWAFYHSSLAPTHELGGYWPPAGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQALFITIALGLYFTVLQAAEYYEAPFTISDGIYGSTFFMATGFHGFHVIVGSTFLLVCFLRQLKYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKTHPLMKIINSSFIDLPAPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGLYYGSYMFLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAAMAGVHLLFLHETGSNNPSGLCSDADKIPFHPYYTIKDILGVLLLILVLTTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIVPLLHTSKQRSMMFRPFSQCLFWILVADLITLTWIGGQPVEHPFIIIGQLASILYFLLILVLMPITSILENNLL---KW--------MF--------MINLLTMIVPILLAVAFLTLIERKVLGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSISMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFLLAVSSLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQQFSWLLLSTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFLGSLHMIYLPELYSINFTIKALLLTISFLWVRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSLPIFTSSI-P-PQT--MNP-IIMIMILTTVMLGTLIVVTSSHWFMIWIGFEMNMLAIIPMLMKNYNPR-SMEASTKYFMTQATASMILMLAIIMNLLQSGQW--TITNITNPTASMLMTMALVMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKIAPLSVLYQTYQSINLEMLLTM-SLLSVIVGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLIYNPTLMLLNLIIYITMTISMFMLFMFTSSTTTLSL---SHTWNKTPLITILILTTLLSMGGLPPLTGFLPKWMIIQELTKNDSLIMPTMMAILSLLNLFFYMRLTYSTSLTMFPTTNNTKLMW-QHESTKKIPMM-------APMITISTLTLPLAPLFISLH---MN-MILALFTNMSLATILVLVAFWLPQLNIYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNQLNIMITMALALIALLAMSLAYEWWQKG--LEWTE-MSLVHMNIGLAFTVAFLGLLMYRSHLMSSLLCLEGMMLTLFIMSSIMVLNMHFTLASMLPIILLVFAACEAAVGLSLLVMVSNTYGVDYVQNLNLLQCMLKIIMPTIMLIPLTWLSNKKHMWINTTMYAMLISLITL-PLFHYPNNSDNYFS-TTFFSDPLSTPLLTLTTWLLPLMLMASQNHLMNETEQRKKLYISMLIMLQTFLIMTFSATELIMFYILFEATLIPTLILITRWGNQTERLNAGLYFLFYTLIGSLPLLVALLYIQTTTGTLNFTITQFCAQSIM-NSW-----SDDLLWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITVLLNP-ITETMAYPFLLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMATWWLLASLTNLALPPTINLIGELFIMLSTFSWSNTTMILTGINVVITALYSLYMLIMTQRGKYSYHINTINPTFTRENCLMTLHIVPLLLLSLNPKLILGTLY------MNLFTST-LILSLSMLTIPVLMS---LSSIYKS-TQYPYYVKTI-ISYAFFTSLIPTLIFINSGHEAILSNWHWMTIQTVKLSLNFKLDYFSMIFTPVALFVTWSIMEFSMWYMHSDPNMNRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLFNSNSWELQQIFMLDTN-QNLLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLIETNKTMQTLILCMGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLYNALPFTTTSLIVGSLALTGTPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-LTAVYSTRILYYSVLGQPRHSTLILINENNPLLINSIKRLLIGSIFAGFIISLNITPMTIPQMTMPTHLKLTALIITLTGFILALEISLMTQNLK--LSYPHNYHKFSNMLGYFPIIMHRLIPSTTLMMSQKFSSMLLDLTWMENILPKSISNFQASSSI--MVSNQKGLIKLYFLS---FLITL--IITMLLF----------NFHA---- +>Axis_porcinus_Hog_deer +----MNENLFASFITPM-ILGLPLATLIVMFPSLLFPTSN-RLVNNRFISLQQWMLQLVSKQMMGIHNAKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVVIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALVTFTILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMIMSMF-LTLFIIFQLKISKHNFHF-NPELT-LTKTQKE-DTP-W-KTKWTKIYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSIVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVIELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMVLLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGVCLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALTMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGIMLLILFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALASSILILIFMPILHTSKQRSMMFRPFSQCLFWVLVADLLTLTWIGGQPVEYPFIIIGQLASILYFFIILVLMPITSTIENNLL---KW--------MF--------MVNILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILMSSI-P-PQT--MNP-IIFILILSTMMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFSLFMANSTTTTLSL---SHTWNKMPVMTVLILITLLSMGGLPPLSGFMPKWMIIQEMTKNDNLILPTLMAITALLNLYFYMRLAYSTALTMFPSTNNMKMKW-QFSITKQMPLL-------PTMIVLSTMLLPLTPILSILE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVALAGLLMYRSHLMSSLLCLEGMMLALFVMASLTILNLHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSAPLLILTMWLLPLMLMASQHHLSKESITRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALVYLQNITGSLNFLVLQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-ALVTLLLLTIPIMAT---SSDNYKI-SNYPLYVKTT-ISYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRSDANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLNPN-DSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTESNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLISINENNPFLMNSIKRLMIGSLFAGFIISNNIPPMTIPQLTMPYYLKTTALTVTILGFILALEISNMTQNLK--FNYPTNIFKFSNMLGYFPTIMHRLTPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQMKMSI--MVTNQKGLIKLYFLS---FLVTI--IISMVLF----------NFHE---- +>Arctocephalus_pusillus_cape_fur_seal +----MNENLFTSFTSPT-MMGLPIVTLVILFPSMLFPSPG-RLINNRFTSIQQWLIQLTSKQMMMIHNHKGQTWTLMLTSLIMFIASTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVAMGLRHKTKASLAHFLPQGTPSPLIPMLVIIESISLLIQPMALAVRLTANITAGHLLIHLIGGATLALTN-ISMITALITFIILILLTIREFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTIASMI-LTLFIVFQLKISKHHFPM-SPELK-SLSASKT-NTP-W-EKKWTKIYSP-LS-LPLQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSLVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFMLDSTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFMIWEAFASKREVETVELTLTNMEWLHGCPPPYHTFEEPTYIVS-K--------MAYPFQMGLQDATSPIMEELTHFHDHTLMIVFLISSLVLYIISTMLTTKLTHTSTMDAQEVETVWTILPAIILIMIALPSLRILYIMDEINNPSLTVKTMGHQWYWTYEYTDYEDLSFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVIESVPLSCFEKWSASMLQ---------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTYLLSLGLMTNTLTMYQWWRDVVRESTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIMPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITILLGLYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLAVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKVHPLAKIINNSLIDLPAPSNISAWWNFGSLLAVCLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTLTETWNIGIILLFTIMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFVASALVMVHLLFLHETGSNNPSGVSSDSDKIPFHPYYTIKDILGTLLLILILMLLVMFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRGMMFRPISQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASVLYFTILLILMPIAGIIENNIL---KW--------MA--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSASMFITAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTTLFLGAFHSPYMPELYTINFTMKTLMLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPVITASI-P-PQT--MKP-PIFIMIMTTVVSGTMIVLTSSHWLMIWIGFEMNMLAIIPILMKNPSPR-ATEASTKYFLVQATASMLLMLGIIINLTTSGQW--TILKLPNSMASNLLTIALAMKLGMAPFHFWVPEVTQGTPLSSGMILLTWQKIAPLSVLYQITPSINPNLMTIM-AIASMLVGGWGGLNQTQLRKILAYSSIAHMGWITIIMTYNSTLTLLNLTIYITMTLGTFMLFMYNSSTTTLSL---SHTWNKLPLMTSLILMLMLSLGGLPPLSGFVPKWLIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTLFPSTNNMKMKW-QFENTKKMVLL-------APLIIISTMLLPMTPMMSILD---MN-MILALLTNTILASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHANNLTTTLTMALMLISLLAASLAYEWTEKG--LEWTE-MSMVYFNIFMAFIVSFMGLLMYRSHLMSSLLCLEGMMLSLFVMMSMTILSNHFTLASMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTIMLMPMTWMSKPHMIWINTTTYSLLISLTSL-PLLNQLNDNSLNSS-LLFFTDSLSAPLLTLTTWLLPLMLMASQFHLSKEPLTRKKLYITMLILLQLFLIMTFAATELIMFYILFETTLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLHLQNSMGTLNFLMAQYLAQTLP-NSW-----SNVLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-LTSFMAYPFMMLSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILVQTPLSYMGATALMIAHGLTSSMLFCLANSNYERTHSRIMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMATFSWSNATIILMGVNIIITALYSLYMLITTQRGKHTYHIKNIKPSFTRENTLMMLHLMPLLLLSLNPKMILGPLY------MNSFSSF-IITTLFMLTMPIILA---NTPTYEN-KLYPQYVKTT-ISYAFMISMIPTMMFISSGQEMIISNWRWMTIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSIWYMSSDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRSDANTAALQAILYNRIGDVGLLMAMAWFLTNLNTWDLQQIFMIHHN-NLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNTMMQTITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMIVTIGIGQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSNTNAWALLLTLMATS-MTAAYSTRMMFFTLLGQPRFNPTIMVNENDPLLINPIKRLLLGSIFAGYLMTLSIPPTMVPQLTMPYHLKLTALAVTLLGFMLALELSTTSLNLK--FKHASNLSKFSNLLGYFPTIIHRLVPAVNLTASQKLASMLMDMIWLEYLLPKSISHLNMKSSI--TISNQKGLIKLYFLS---FMITL--ALALILTT--------ANFHE---- +>Gazella_dorcas_Dorcas_gazelle +----MNENLFTSFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLLNNRLISLQQWALQLVSKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHXIGGATLALMN-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYH-NPEPM-SAKTLKQ-ITP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPVQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSARPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDVVRESTFQGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLVVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINTRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFXFILPFIIAALAMVHLLFLHETGSNNPTGISSDVDKIPFHPYYTIKDILGALLLILVLTLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYSLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPAASTIENSLL---KW--------MF--------MVNVLMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWMIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYLPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFTIILTTVLLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMELFNPTASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISTSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPIMTTLVLTTLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPITKQMTLL-------PTMVTLSTMLLPLTPILSILE---MN-LMLALLTNLTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLSTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMTAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIFPTMMLMPLTWLSKSSMIWINSTSHSLMISFTSL-LLMNQFSDNSLNFS-LIFFSDALSMPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELIFFYVLFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYIQNTAGSLNFLILQYWVQPMS-NSW-----SNVFTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTLLLNP-VTEFMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPSINLIGELFVVMSTFSWSNITIVLMGLNMVITALYSLYMLITTQRGKYTYHINNILPSFTRENTLMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLVTLLLLTIPIMMT---SSDTYKT-FNYPLYVKTT-ISCAFLTSMIPTMMFIHTGQEMVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLMNLNTWDLQQIFMLNPN-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGVPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPALIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPMTVPQMTMPYYLKTMALAVTILGFMLALEISNTTYNLK--FKYPSSTFKFSNLLGYYPMIMHRLTPYMNLTMSQKSATSILDLIWLENILPKTTSLIQMKMST--AVTNQKGLIKLYFLS---FLITI--LVSTILL----------NFHE---- +>Enhydra_lutris_sea_otter +----MNENLFSSFITPV-VMGLPIVIAIVMFPSIMFPSPS-RLINNRLISIQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTITAAVTFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITIMSMI-ITLFIMFQLKVSKHCFPD-NPEPK-LTTTSKP-TTP-W-EEKWTKIYFP-LS-LPL-----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYMLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVLTVQLTSTNIEWLHGCPPPYHTFEEPTYVLS-K--------MAYPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQAVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLTTSGLVMWFHFNSMFLLTLGMVTNVLTMYQWWRDIVREGTFQGHHTPTVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITISLGLYFTLLQASEYYEAPFAISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLTKIINNSFIDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYMFSETWNIGIVLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAMIHLLFLHETGSNNPSGIPSNSDKIPFHPYYTIKDILGALSLVLALTTLVLFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFVVIGQLASILYFMILLVLMPITSIIENNLL---KW--------ML--------MINIISLIVPILLAVAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFVMAPILALALALTMWVPLPMPYPLVNMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHTPYLPELYTINFTVKTLLLTASFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASI-P-PQT--MKP-LVLTTIMSTVILGTITVLMSSHWLMIWIGFEMNMLAIIPVLMKSFNPR-TMEASTKYFLAQATASMLLMLGVIINLLLTGQW--TVLNTPHPITSNMMTVAMAMKLGLSPFHFWMPEVAQGISLSSGMILLTWQKIAPLSVLYQISPSVNPNLLMTM-AAMSVLVGGWGGLNQTQLRKILAYSSIAHMGWMVAVTTYNPTLMLLNLTIYIMMTLGTFMLFILSSSTTTLSL---SHMWNKTPLITSLVLAIMLSLGGLPPLSGFIPKWMITYELTKNNMVTAAMFMAMTALLNLYFYMRLTYATALTMFPSTNAMKMKW-QFENMKNTTLM-------SPLIVSSTMLLPLTPMMLAMF---MN-MMLTLLTNMSLASLLILIAFWLPQLNIYMEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNNLETTLITALTLISILAVSLAYEWTEEG--LEWNE-MSMVYINIFLAFILSFMGLLMYRSHLMSSLLCLEGMMLSLFVMMTITILVNHFTLASMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIILPTMMLIPLAWLSKYNMIWINTTAYSMLISLISL-TYFNQSPDNNLSFS-LLFFADSLSAPLLTLTTWLLPLMLMASQHHLSKETLIRKKLYITMLITLQLLLIMTFTSTELIMFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLWTQNNLGTLHLLVIQFWVQPLP-NTW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMLLNP-LTNHMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAVLIQSPWSYTGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQMLLPLMAAWWLLASLTNLALPPTINLVGELFVVMASFSWSNITIILLGINITITALYSLFMLITTQRGKLTHHIKNVNPSFTRENSLMALHLLPLLLLSLNPKIILGPIY---MKVINLFTSS-ILVTLFMLTLPIMMT---NTTLYTN-KLYPQYVKTT-ISHAFMMSLIPTMMFLYLGQDTMISNWHWITIQTVKLSLNFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFILAMAWFLANLNTWDLQQILMTDHK-NLNLPLTGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTIQTITLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLYKALPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-MTAAYSTRILFFALLGQPRFNPVVAINENNPLLINSIKRLLLGSIFAGFLISYNITPTTTPQMTMPHYLKMMALTMTILGFILALELNLTMQSLK--FKYPSNLFKFSNMLGYFPTTIHRLMPKMNLLMSQKSASTLLDMIWLEKILPKSISHFQMKSSI--TVTNQKGLIKLYFLS---FMLTL--TLSLLVL----------NFHE---- +>Nyctereutes_procyonoides_raccoon_dog +----MNENLFASFTTPS-MMGLPIAVLIVMFPSILFPSPG-RLINNRLISIQQWLIQLVSKQMLSIHNQKGRTWALMLVSLILFIASTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALID-ISTTTAFITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTMIISMI-LTLFILFQLKISMHYYPE-NPGPK-PTKMINQ-HTP-W-ENKWTKIYSP-LS-LPPQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVATVELTTTNIEWLHGCPPPYHTFEEPTYVIQ-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVILPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLEMVPLSYFETWSALMV----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHYNSMSLLMLGLTTNMLTMFQWWRDVIREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGVIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLYYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLAKIVNNSFIDLPAPSNISAWWNFGSLLGVCLILQIMTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFMETWNIGVILLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPSGISSDSDKIPFHPYYTIKDILGGLLLILILMSLVLFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILVFTPLLHTSKQRGMMFRPLSQCMFWLLTADFLTLTWIGGQPVEHPFIIIGQIASILYFTILLILMPTIGIIENNLL---KW--------MF--------LINIISLIVPILLAVAFLTLVERKILGYMQFRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSMSMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHMWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFFGAFHNPFLPELYSINFTIKALLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVALPIITASI-P-PQT--MKP-PILITILATVLTGTVIVMMSSHWLLMWMGFEMNMLAVMPILMKKFNPR-AVEASTKYFLTQATASMVFMMGVTINLLYSGQW--VVSKVSNPAASAMMTIALTMKLGLSPFHFWVPEVTQGISLTSGMILLTWQKIAPMSVLYQISPSVNTNLLTLM-ALTSILVGGWGGLNQTQLRKIMAYSSIAHMGWMTAIIIYNPTMTILNLILYILMTLSTFMLFMLNTSTTTLSL---SHVWNKFPLMTSVILALMLSLGGLPPLSGFIPKWMIILELTKNNMIITPTLMAITALINLYFYMRLTYSTALTMFPSANNMKMKW-QFEHTKKMTLL-------PPLIITSTMLLPLSPTLSILY---MN-MLLTLTTNIALASLLVMIAFWLPQLNIYADKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLTTMLIMALLLISLLAASLAYEWTEKG--LEWAE-MSMVYINIFLAFTLSLMGMLIYRSHLMSSLLCLEGMMLSLFVMMSVTILNNHITLASMMPIVLLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTTMLIPLTWMSKPNMIWINTTSHSLLISLISL-SYLNQPNDNYLNSS-LLFFSDSLSAPLLALTTWLLPLMLMASQYHLSKEPYTRKKLYASMLILLQLFLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLHIQNNMGSLSFLMVQYWARPLP-NSW-----SNILLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRVTTMLNP-LTNFMAYPFMLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVVVAVLIQTPWSYMGATTLMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMATFSWSNITILLMGANIIITALYSLYMLITTQRGKHTHHIKNIKPSFTRENTLMALHMLPLLLLSLNPKIIMGLLY------MNMFASC-MITALILLILPIMLS---FTKLYKN-KLYPQYVKTT-TSYAFMITMIPTMMFIYSGQEMIISNWHWITIQTMKLSMSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRVGDVGFMITMAWFLLNLNTWDFQQIFLTSNN-NLDLPLFGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLLEQSQTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTLPFTTSSLIIGSLALTGMPFLTGFYSKDLIIETANTSNTNAWALLITLVATS-LTAAYSTRIMFFTLLGQPRFTPMILINENNPLLINSIKRLLIGSVFAGYVISHSITPTTIPQMTMPHYLKMTALAVTILGFILALELNLTMQGLK--FNQPSYYFKFSNLLGYYPIIMHRLTPKTSLTMSQSSASMLLDSIWLESVLPKSISYFQMKSST--LISNQKGLIKLYFLS---FMITM--LLSLMIL----------NYHG---- +>Eumetopias_jubatus_Steller_sea_lion +----MNENLFTSFASPT-MMGLPIVTLVILFPSMLFPSPS-RLINNRLTSIQQWLIQLTSKQMMLMHNHKGQTWTLMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVAMGLRHKTKASLAHFLPQGTPSPLIPMLVIIESISLLIQPMALAVRLTANITAGHLLIHLIGGATLALIN-ISMISAFITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLTTIVSMI-LTLFIVFQLKISKHHFPM-SPELK-PLSTSKT-YTP-W-EKKWTKIYSP-LS-LPLQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSLVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPTGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLVIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFSLDSTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMIWEAFASKREVETVELMSTNMEWLHGCPPPYHTFEEPTYIVS-K--------MAYPFQMGLQDATSPIMEELTHFHDHTLMIVFLISSLVLYIISTMLTTKLTHTSTMDAQEVETVWTILPAIILIMIALPSLRILYIMDEINNPSLTVKTMGHQWYWTYEYSDYEDLSFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVIESVPLSCFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTHLLLLGLMTNTLTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALLITILLGLYFTLLQASEYYETSFTISDGIYGSTFFMATGFHGLHVIIGSTFLTVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKAHPLAKIINNSLIDLPAPSNISTWWNFGSLLAACLALQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWLIRYMHANGASMFFICLYMHVGRGLYYGSYTLTETWNIGIILLFTIMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFVASALVMVHLLFLHETGSNNPSGISSNSDKIPFHPYYTIKDILGTLLLILILMLLVMFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILVIIPLLHTSKQRGMMFRPISQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFTILLVLMPIAGIIENNIL---KW--------MI--------MINIFSLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSASMFITAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMWSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQERLWLIFPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTTLFLGASHNPYMPELYTINFTLKTLMLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPVITASI-P-PQT--MKP-PILIMIMTTVMSGTMIVLTSSHWLMIWIGFEMNMLAIIPILMKNFSPR-ATEASTKYFLIQATASMLLMLGIIINLTTSGQW--TILKLPNPMASNLLTIALAMKLGMSPFHFWVPEVTQGIPLSSGMILLTWQKIAPLSILYQITPSINPNLLITM-AIASVLAGGWGGLNQTQLRKILAYSSIAHMGWITIIMMYNPTLTLLNLTIYITMTLGTFMLFMYNSSTTTLSL---SHTWNKLPLMTSLILALMLSLGGLPPLSGFVPKWLIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTLFPSTNNMKMKW-QFENTKKMVLL-------PPLIIISTMLLPITPMMSILD---MN-MILALLTNTILASLLVLIAFWLPQLNIYSEKASPYECGSTPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHANNLTTTLTMALMLISLLAVSLAYEWTEKG--LEWTE-MSMVYFNILMAFIVSFVGLLMYRSHLMSSLLCLEGMMLSLFVMMSVTILNNHFTLASMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIYPTIMLMPMMWMSKPHMIWINTTIYSLLISLTSL-PLLNQPNDNSLNSS-LLFFTDPLSAPLLTLTTWLLPLMLMASQFHLSKEPLARKKLYITMLILLQLFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLLGSLPLLVALLYMQNNMGTLNFLMAQYWTQALP-NSW-----SNILLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITIQLNP-LTSFMAYPFMMLSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPLSYMGATALMIAHGLTSSMLFCLANSNYERTHSRIMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNTTIILMGANIIITALYSLYMLITTQRGNYTYHIKNIKPSFTRENTLMMLHLMPLLLLSLNPKMILGPLY------MNLFASF-IITTLFMLTMPIILT---STPIYKS-KLYPQYVKTT-ISYAFMTIMIPTMMFISSGQEMIISNWHWMTIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMASDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRSDANTAALQAILYNRIGDVGFIMAMAWFLTNLNTWDLQQIFMIHHN-NLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEDNVTMQTITLCLGAITTLFTAVCALTQNDIKKIIAFSTSSQLG--LMIVTIGIGQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKPMPFTTTSLIIGNLALTGMPFLTGFYSKDLIIETANTSNTNAWALLLTLMATS-MTAAYSTRMMFSTLLGQPRFNATITANENNPLLINPIKRLLLGSIFAGYLMTLNIPPTMIPQLTMPHHLKLTALIVTLLGFVLALELNMTSLSLK--FKHASGLSKFSNLLGYFPTIIHRSVPTMNLAASQKLASTLMDTIWLEYLLPKSISHLNMKSST--IISNQKGLIKLYFLS---FMITL--TLALILTT--------ANFHE---- +>Callorhinus_ursinus_northern_fur_seal +----MHENLFASFTSPT-MMGLPIVTLIILFPSMLFPSPN-QLISNRLTSIQQWLIQLMSKQMMSIHNHKGQTWALMLMSLITFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVIVGLRHKTKASLAHFLPQGTPSPLIPMLVIIESISLLIQPMALAVRLTANITAGHLLIHLIGGATLALTN-ISMITAFITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFMTVLSMI-LTLFIVFQLKISKHHFPM-SPELK-SPLTSKI-NTP-W-EKKCTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSLVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFTLDGTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMIWEAFASKREVEAIELTSTNMEWLHGCPPPYHTFEEPTYIVL-K--------MAYPFQMGLQDATSPIMEELTHFHDHTLMIVFLISSLVLYIISTMLTTKLTHTSTMDAQEVETVWTILPAIILIMIALPSLRILYIMDEINNPSLTVKTMGHQWYWTYEYTDYEDLSFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVIESVPLSCFEKWSASMLQ---------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFSSTYLLLLGLVTNTLTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPMGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITIMLGLYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKVHPLAKIINSSLIDLPAPSNISAWWNFGSLLATCLVLQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTLTETWNIGIILLLTIMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGANLVEWIWGGFSVDKATLTRFFAFHFILPFMVSALVMVHLLFLHETGSNNPSGVSSDSDKIPFHPYYTIKDILGTLLLILILMLLVMFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVVALLLSILVLAIIPLLHTSKQRGMMFRPISQCLFWLLVADLLTLTWIGGQPVEYPFIAIGQLASILYFMILLVLMPMAGIIENNIL---KW--------MI--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSTSMFIMAPILALTLALTMWIPLPMPYPLTNMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSALITTQEHLWLIFPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTTLFLGAFHNPYMPELYTINFTLKTLALTIVFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMTLPVITASI-P-PQT--MKP-PILIMIMTTIMSGTMIVLTSSHWLMIWIGFEMNMLAIIPILMKNFSPR-ATEASTKYFLVQATASMLLMLGIIINLMSSGQW--TILKLPNPMASNLLTIALAMKLGMSPFHFWVPEVTQGTPLPSGMILLTWQKIAPLSILYQIAPSINPNLLTIM-AIASLLVGGWGGLNQTQLRKIMAYSSIAHMGWTTIIMMYNPTLMLLNLTIYITMTLGTFMLFIYNSSTTTLSL---SHTWNKLPLMTSLILILMLSLGGLPPLSGFVPKWLIMQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTLFPSTNNMKMKW-QFESTKKMILL-------PPLIIISTMLLPMTPMMSILD---MN-MILALLTNTILASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHANNLTTTLTMALTLISLLAVSLAYEWTEKG--LEWTE-MSMVYFNIFLAFIVSLVGLLMYRSHLMSSLLCLEGMMLSLFVMMSVTILNNHFTLASMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTIMLMPLTWMSKPHMIWINTTTYSLLISLASL-PFLNQLGDNSLNLS-LLFFTDSLSAPLLTLTTWLLPLMLMASQFHLSKEPLTRKKLYITMLILLQLFLIMTFAATELIMFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYMQNNMGTLNFLVAQYWAQTLP-NSW-----SNVLLWLACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLSP-LTSFMAYPFMMLSVWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPLSYMGATALMIAHGLTSSMLFCLANSNYERIHSRIMILARGLQTLLPLMAAWWLLANLTNLALPPTINLIGELLVVMTSFSWSNITIILMGTNIIITALYSLYMLIMTQRGKYTHHIKNIKPSFTRENALMTLHLLPLLLLSLNPKMILGTLY------MNLFTSL-TVTTLFMLTMPIILT---STSIYKS-KLYPQYVKTT-ISYAFMISMIPVMMFIYSGQEMIISNWHWMTIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMASDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRSDANTAALQAILYNRIGDVGFIAAMAWFLANLNTWDFQQIFMIHHN-DLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNSTMQTATLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGIGQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKPMPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSNTNAWALLLTLTATS-MTAAYSTRMMFFTLLGQPRFNSTITMNENNPLLINPIKRLLLGSIFAGYLMTLNIPPMTTPQLTMPHHLKLTALTMTLMGFILALELSMTSLNLK--FNHASNLFKFSNLLGYFPTIIHRLMPMTNLTASQKLASTLMDMIWLEYLLPKSISHLHMKSST--TISNQKGLIKLYFLS---FMITL--TLAMMLIM--------TNSHG---- +>Antilocapra_americana_pronghorn +----MNENLFASFITPT-ILGLPLVILIIMFPSLLFPTSN-RLMNNRLISLQQWALQLISKQMMSIHNPKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKSSLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTAFITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFTMIVSMF-LTLFIIFQLKIAKHTLYH-NPEST-LTKTQKQ-NTP-W-ETKWTKIYLP-LS-LPQQF---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNMAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFSSKREVLSVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTVRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEEWSASMS----------MTHQTHPYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTTLLMLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRTPMLQALFITIMLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYMFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGALLMVLALMMLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIFMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEHPFIIIGQLASIMYFLIILVLMPVTSTIENNLL---KW--------MF--------MINILTLIVPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFVKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEQVWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNAFTTILFLGASHNPCMPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSGI-P-PQT--MNP-IIFAIILSTIMLGTIIVMISSHWLLIWIGFEMNMLAIIPVMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLLFSGQW--TVMNLFNPTASMFMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPIMTILVLTTLLSMGGLPPLTGFMPKWMIIQELTKNDSIILPTLMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFPTTKRMTLL-------PTMAVLSTMLLPLTPMLSVLE---MN-LMLALLTNLTLASLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLILLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMIAFTVSLAGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTVMLMPLTWLSKGNMIWINSTTHSMLISLTSL-LLMNQFCDNSLNFS-PTFFSDSLSTPLLILTMWLLPLMIMASQHHLSKESLTRKKLYITMLILLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVTLVYIQNTMGTLNFLILQYWVQPLP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTYLNP-LTEFMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGTNMVITALYSLYMLIMTQRGKYTHHINNITPSFTRENALMSLHILPLLLLSLNPKIIMGPLY------MNLFSSL-TLTTLFLLTLPIMMA---NSDIYKS-SNYPLYVKTT-ISCAFTISMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLANLNTWDLQQIFMLNPD-NSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKPMQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLININENNPFLMNSIKRLMMGSLFAGFIISNSIPPTTIPQLTMPPYLKMMALAVTILGFILALEISNMTLNLK--FKHPSPAFKFSNLLGYFPTIMHRLAPYMNLNMSQKSASLLLDLIWLENILPKTTSLIQMKAST--MVTNQKGLIKLYFLS---FLITI--TISMILF----------NFHE---- +>Carollia_perspicillata_Sebas_short-tailed_bat +----MNENLFASFITPT-MMGLPIVMLIIMFPTIMFPSTN-RLINNRLLAIQQWLVHLTSKQMLSIHSHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWTGTVILGFRHKTKASLAHFLPQGTPLPLIPMLIVIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISTATAFITFVILVLLTVLEFAVALIQAYVFTLLVSLYLHDNAMPQLDTSTWFITILSTL-ITLFIIMQLKVSSHYYYS-TPEPK-TTKTTKS-LIP-W-ETKWTKIYSP-LS-LPLR----MFISRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGVGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPDMLWALGFIVLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNSTWAKIHFLVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMMWEAFAAKREVSIAELTTTNIEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFMISSLVLYIISSMLTTRLTHTSTMDAQEVETIWTILPAVILITIALPSLRILYMMDEINNPFMTVKTMGHQWYWSYEYTDYTDLCFDSYMIPTSDLKAGDLRLLEVDNRVVLPMETTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKYFEKWSTSML----------MTHQTHAFHMVNPSPWPLTGALSALLLTSGLVMWFHYNSMALLSLGLLTNSLTMYQWWRDVVREGTFQGHHTPVVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLNPLDVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQSLLITICLGLYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNSSFVDLPAPSSLSSWWNFGSLLGVCLAVQILTGLFLAMHYTSDTATAFNSVTHICRDVNYGWVLRYLHANGASMFFICLYLHVGRGLYYGSYTYSETWNVGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFLLPFVVAALVMVHLLFLHETGSNNPTGIPSDSDMIPFHPYYTIKDILGFLVMLTALSTLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIVPMLHVSKQRSMMFRPLSQCLFWLLVAVLFTLTWIGGQPVEHPYIIIGQMASVLYFLIILVLMPLTSIVENRLL---NW--------MY--------LINLLTTIVPVLLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSIIMFIIAPILALTLALTMWIPLPMPHPLVNMNLSVLFMLAMSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYSLSTLITTQEFIWLIFPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTTILFLGAYHSPTFPELFTTNFAIKTLILTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVTMPITMAGI-P-PQT--MNP-ITFPMIMSTIILGTMIVITSSHWLTVWIGFEMNMLAIIPVLMKTHHPR-STEAATKYFLTQATASMLLLLAVIINLLYSGQW--TVTNIINPTASTILTLAMTMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSILYSIFPSINLNLLLTM-SLLSVMVGGWGGLNQTQLRKIMAYSSIAHMGWMTSILIYNPTMTLLNLTIYIMMTLTMFMLLITTTTTTTLSM---AHTWNKMPLITVIMLTTLLSLGGLPPLTGFLPKWMIIQELTKNNNIILPTIMAITALLNLYFYMRLTYATSLTMFPTTNNIKTKW-HFNTTKQTPLI-------SPLTVISTMTLPLAPMLMILY---MN-MAITLLTNTLLASLLVTIAFWLPQMNTYAEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDSLQVMLPMALMLISLLAISLAYEWLQEG--LEWSE-MSLTYMNMFLAFTISLIGLLMYRSHMMSSLLCLEGMMLSLFVMMTVTILTTHLTLASMLPIILLVFAACEAALGLSLLVMVSTTYGMDYVQNLNLLQCMLKIIIPTVMLIPLTWFSKPKMIWINTTTYSLMISILWF-PLVNQFTDNSLNFS-LMFFSDPLSTPLLMLTLWLLPLMIIASQSHLTNETPQRKKLYITMLVLLQIFLLMTFTATELILFYILFEATLLPTLIIITRWGNQAERLNAGLYFLFYTLLGSLPLLVALLHLQNLSGTLNFLLAQYYNTPLS-TSW-----NTSLLWLACMMAFMVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITILLEP-LTQSMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVIMSTFSWSSMSLILMGLNITITALYSLYMLIMTQRGKHTQHINNILPSFTRENTLMTMHIIPLLLLSLSPKIILGTPY------MNLFSSM-MIASMITLITPILMN---MLNPQNN-SNFPHYVKTM-VSYAFLISMIPTTMFIYSGQEMIISNWHWITIQTLKLSMSFKLDFFSMLFMPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLTFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILSMAWFLANFNTWELQQIFSLTPN-TTSLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNPLVQTTTLCLGAITTLFTAVCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKSMPFTTTAMTVGSLALTGTPFLTGFYSKDLIIEAANTSYANAWALLMTLIATS-LTAVYSTRIIFFALLGQPRLPSLILINENNPLLLNAIKRLLIGSIFAGFLISKNIPPTSILPMTMPSYLKLTALTVTLAGFILALELNLATLNLK--FKGPSNTLKFSNLLGYFPTIIHRLPPMINLTTGQKSASMLLDLTWLETLFPKTISLFQLKTSI--MVSTQKGLIKLYFLS---FLITL--LLVILLL----------TPHA---- +>Cephalophus_natalensis_Natal_duiker +----MNENLFASFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWLLQLISKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILVLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYL-SPELV-LMKTSKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLMLGLTTNMLTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTYMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGISSDTDKIPFHPYYTIKDILGALLLVLALMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPMASTIENNLL---KW--------MF--------MVNILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTVNFTVKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFLIILLTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLSNPMASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLDLILTL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTVLILVTLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSVLE---MN-LMLALLTNLALATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLILLLAVSLAYEWTQKG--LEWTE-MSLVFMNIMLAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTMHSLLISLTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQNHLSKENLARKKLFITMLILLQLFLIMTFTATELILFYVLFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIHIQNTTGSLNFLVLQYWAQPMP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYAHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLLLLTIPIMMT---SSPTYKT-SNYPLYVKTT-ISYAFLISMIPTMMFIYTGQEAIISNWHWLTMQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRIGDIGFILAMAWFLANLNTWDLQQIFMLDPN-NTNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPYYLKMTALAVTILGFILALEVSNMTHNLK--FNYPSNTFKFSNLLGYYPMIMHRLAPYLNLTMSQKSASSLLDLIWLENVLPKTTSLIQMKMST--MITSQKGLIKLYFLS---FLITI--LISTILF----------NFHE---- +>Raphicerus_campestris_steenbok +----MNENLFASFITPM-VLGLPLVTLIVLFPSLLFPTSN-RLVNNRLISLQQWILQLTSKQMMSIHNPKGQTWALMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILILLTVLEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHSFHH-NPEPA-STKMMKH-SNP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDYTTTNLEWLNGCPPPYHTFEEPTYINL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTILLMIGLTTNTLTMYQWWRDVIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRYPMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNVGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGVLLLILTLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHMSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFTLILVLMPIASTIENNLL---KW--------MF--------MINILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYIPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILTTVLLGTTIVMISSHWLLIWIGFEMNMLSIIPIMMNKHSPR-ATEASTKYFLTQSTASMLLMMAIIINLLFSGQW--TVTKLFNSMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLFPGLILLTWQKLAPMSVLYQISPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPSTTLLNLIIYMIMTSTMFMLFMTNSTTTTLSL---SNTWNNTPITTVLILVTLLSMGGLPPLSGFMPKWMIIQELTKNDSVILPTLMAMMALLNLYFYMRLTYSTTLTMFPSMNNMKMKW-QFSSTKQMTLL-------PTMVVLSTMILPLTPILSILE---MN-LMLALLTNVTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLILLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFMVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLIPLTWLSKNSMIWINSTTYSLLISLTSL-LLMNQFSDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQNHLSKENLTRKKLFITMLILLQLFLIMTFTATELIFFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYIQNTMGSLNFLILQYWVQPMP-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-MTDLMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQMLLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKCTHHINNISPSFTRENALMFLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLFLLTIPIAMT---SSDAYKT-SNYPLYVKTT-ISYAFLISMIPTMMFIHTGQEMVISNWHWMTIQTLKLSLSFKMDYFSMVFVPVALFVTWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDFQQIFMLNPN-NSNLPLMGLALAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAINTSYTNAWALLLTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPMTVPQMTMPHYLKAMAMAVTILGFILALEISNMTYYLK--FSYASKMFKFSNMLGYYPTIMHRLAPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQMKMST--MITSQKGLIKLYFLS---FLITI--LISMTLL----------NFHE---- +>Canis_lupus_lupus_Eurasian_wolf +----MNENLFASFAAPS-MMGLPIVVLIVMFPSILFPTPS-RLINNRLISIQQWLIQLTSKQMLAIHNQKGRTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLPLIPMLVVIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALIN-ISATTAFITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFIMIFSMF-LTLFILFQLKISNHYYPE-NPMTK-SAKIAGQ-HNP-W-ENKWTKIYSL-LS-LPPQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAMVELTTTNIEWLHGCPPPYHTFEEPTYVIQ-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLEMVPLSYFETWSALMV----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHYNSMSLLTLGFTTNLLTMYQWWRDVIREGTFQGHHTPIVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLYYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIVNNSFIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYVFMETWNIGIVLLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPSGITSDSDKIPFHPYYTIKDILGALLLLLILMSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILAFIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQVASMLYFTILLILMPTVSVIENNLL---KW--------MF--------FINIISLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSMSMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHMWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHNPFMPELYSINFTMKTLLLTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVALPIITASI-P-PQT--MKP-PILIIIMATIMTGTMIVMLSSHWLLIWIGFEMNMLAIIPILMKKYNPR-AMEASTKYFLTQATASMLLMMGVTINLLYSGQW--VISKISNPIASIMMTTALTMKLGLSPFHFWVPEVTQGVTLMSGMILLTWQKIAPMSILYQISPSINTNLLMLM-ALTSVLVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIITYNPTMMILNLTLYILMTLSTFMLFMLNSSTTTLSL---SHMWNKFPLITSMILILMLSLGGLPPLSGFIPKWMIIQELTKNNMIIIPTLMAITALLNLYFYLRLTYSTALTMFPSTNNMKMKW-QFEYTKKATLL-------PPLIITSTMLLPLTPMLSVLD---MN-VMLTLMTNVTLASLLVLIAFWLPQLNIYTDKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLTTMLIMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYINIFLAFILSLMGMLVYRSHLMSSLLCLEGMMLSLFVMMSVTILNNHLTLASMMPIVLLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTIMLIPLTWMSKPNMIWINTTTYGLLISLISL-FYLNQPNDNTLNSS-LMFFSDSLSAPLLALTTWLLPLMLMASQHHLSKEPLTRKKLYISMLILLQLFLIMTFTASELIFFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALLYIHNFMGSLNFLMIQYWIQPLP-NSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLNP-LTNFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGINITITALYSLYMLITTQRGKYSHHIKNIKPSFTRENALMTLHLLPLLLLSLNPKIILGPI-------MNMFSSC-MITALVILTLPIIMS---STKLYKN-KLYPYYVKTA-TSYAFMISMIPTMMFIYSGQETIISNWHWMTIQTMKLSMSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLLFLITMMVLVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFIMTMAWFLLNLNTWDLQQIFITTND-NFNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNQTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKVLPFTTTSLIIGSLALTGMPFLTGFYSKDLIIESANTSNTNAWALLITLVATS-LTAAYSTRIMFFALLGQPRFSPMILINENNPLLINSIKRLLIGSVFAGYIISHSITPTTIPQMTMPHYLKMTALAVTILGFILALELNLTTQGLK--FNYPSNYFKFSSLLGYYPTIMHRLTPKTSLTISQKSASMLLDSIWLENILPKSISYFQMKSST--LISNQKGLIKLYFLS---FMLTM--ILSLLIL----------NYHE---- +>Rhinophylla_pumilio_ +----MNENLFTSFITPT-MMGLPVVMLIIMFPTMLFPSTK-RLINNRMLAIQQWLVHLTSKQMLSIHNQKGQTWALMLLSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGGATLALMN-ISMTTAFITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNAMPQLDTSTWFITIVSTI-LTLFTIMQLKISSYYYYT-NPEPK-MTKMSKS-LIP-W-QVKWTKIYSP-LS-LPLR----MFISRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGVGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNTAWAKIHFLVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMMWEAFAAKREVSMAELTTTNLEWLHGCPPPYHTFEEPTYVNS-KQE------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFMISSLVLYIISSMLTTRLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPSMTVKTMGHQWYWSYEYTDYTDLCFDSYMIPTTDLKAGDLRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKHFENWSMSML----------MTHQTHAYHMVNPSPWPITAALSALLLTSGLVMWFHFNSMILLTLGLLTNTLTMYQWWRDIVREGTFQGHHTPVVQKGLRYGMILFIISEVFFFTGFFWAFYHSSLAPTPELGGYWPPAGITPLNPLDVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQSLLITICLGLYFTFLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCLFRQMKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIINSSFVDLPAPSSLSTWWNFGSLLGICLAVQILTGLFLAMHYTSDTATAFNSVTHICRDVNYGWLIRYLHANGASMFFICLYLHMGRGLYYGSYTYSETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFLLPFIVAALVMVHLLFLHETGSNNPTGIPSDSDMIPFHPYYTIKDILGFLIMLTALSGLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAVIPMLHTSKQRSMMFRPLSQCLFWLLTAVLLTLTWIGGQPVEHPFIIIGQTASILYFLIILVLMPITSLTENYLL---KW--------MY--------LLNLLVMIVPVLLAVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFTKEPLRPSTSSIAMFITAPILALALALTMWVPLPMPHPLTNMNLSILFMLAMSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYSLQTLITTQEYIWLILPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNSLTTILFLGAYNDPTYPQLYTTNFAIKSLLLTMTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYITMPIMTASI-P-PQT--MNP-FTLSMITTTIILGTTIVMTSSHWLMIWIGFEMNMLAIIPILMMNHHPR-STEAATKYFLTQATASMLLMLAVVINLLYSGQW--TVSNTVNPTASVIITIAMAMKLGLSPFHFWVPEVTQGIPLVSGLILLTWQKLAPLSVLLMISPNINQNLLLPM-AILSVLIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLMYNPTMTLLNLALYIMMTATMFTLLITTTTTTTLSL---THTWNKSPLIATIMLTTLMSLGGLPPLTGFMPKWMIIQELTKNNNIILPTFMAITALLNLYFYMRLAYATSLTMFPTANNSKSKW-YYTN-NQITLL-------PSLVVISTMTLPLTPLLITLY---MH-MMITLLTNTLLALLLVTIAFWLPQTNTYTEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLQIMLPMALVLTSLLATSLAYEWMQEG--LEWSE-MSLTYMNMFLAFTISLVGLLMYRSHMMSALLCLEGMMLSLFVMMTITILNIHLTLASMTPIILLVFAACEAALGLSLLVMVSTTYGMDYVQNLNLLQCMLKIIVPTTMLIPLVWFSKPKMVWINSTAHSLLISILWL-PIMNQFTDNTLNLS-IMFFSDSLSTPLLMLTLWLLPLMIIASQFHLMNETITRKKLYISMLVLLQTFLIMTFTATELIMFYILFEATLLPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALTYLQNSTGTLNFLLIQYWSSPTT-NSW-----SNSLLWLACMLAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-TTEHMAYPFMILSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERTHSRTMILARGLQMFLPLMATWWLLASLTNLALPPTINLIGELFVTMAMFSWSNLSISLLGLNIILTALYSLYMLITTQRGKQTHHINNMLPSYTRENTLMTLHILPLLLLSINPKIILGTPY------MNLTSLS-TLTCLIILITPILTT---ILTTQSS-PNYPNYVKTM-VSYAFLTSMIPTLIFIFSEQETVISNWHWISIQTLKLSLSFKLDYFSMLFMPVALFVTWSILEFSMWYMHSDPNINRFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILSMAWLMTNLNAWDLQQIFSLAPN-TTLLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFYPLMETNTTAQTMALCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTLGINQPHLAFLHICTHAFFKAMLFMCSGSVIHSLADEQDIRKMGGLFKTMPFTTTAMIVGSLALTGTPFLTGFYSKDLIIEAANTSYTNAWALLMTLMATS-LTAVYSTRIIFFALLGQPRFLPQILINENNPLLFNPIKRLLFGSIFAGFLISKSIPPMTIIPMTMPSYLKLTALIVTLTGFILALELNMAMLNLK--FNTPSDLFKFSNLLGYFPTTMHRLPPLTSLTMSQKSASLTLDLTWLEMVLPKSIAHLQQKSSI--LITNQKGLIKLYFLS---FLISL--LLALILF----------TLHV---- +>Cercopithecus_lhoesti_LHoests_monkey +----MNENLFTPFTTPT-ILNQPATIPIILFPMLLIPTSK-HLINNRLITIQHNLIQPILKQMMITHNAKGQTWSLMLVSLIIFIAMTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVITGLRFKTKNSLAHLLPQGTPTLLIPMLVLIETTSLLIQPMALAVRLTANITAGHLLMHLIGSTVLALLT-INLPVALLTYTLLMLLTILEIAVALIQAYVFTLLVSLYLHNNTMPQLDTSTWFTTIMAML-PALYLITQLKLLNTNFYQ-PPPQK-NPNKQAP-NNH-W-QLKWTKIYLP-HS-QLQQS---MFVNRWLFSTNHKDIGTLYMLFGAWAGIMGTALSLLIRAELGQPGSLLGSDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASAVVEAGAGTGWTVYPPLAGNLSHPGASVDLVIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPTGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKIFSWLATLHGGNVNWSPAMLWALGFIFLFTMGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKAHFIIMFMGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSFISLVAVVLMIYMIWEAFASKRKASVAEQSSTNLEWLNGCPPPYHTFEEPAYIKL-NEKGESRTPMAHPVQLGLQDATSPVMEELITFHDYAFMTISLISFLVLYALSSTLTTKLTNTNITDAQEMETVWTILPAIILILIALPSLRILYMTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFYSTTLLMLGLLTTTLTLHQWWRDIVRESTYQGHHTTSVQKNLRYGMVLFIVSEIFFFTGFFWAFYHSSLAPTPHLGGHWPPTGIIPLNPLEVPLLNTSVLLASGVTITWAHHSLMNSNRKQMIQALLTTILLGTYFTLLQISEYFEAPFTISDGIYGSTFFIATGFHGLHVIIGSTFLLICLIRQLLYHFTSSHHFGFEAATWYWHFVDVVWLLLYISIYWWGS--MTPMRKSNPIMKMINRSLIDLPSPSNISMWWNFGSLLAFCLTLQIITGLFLAMHYSPDTSTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLLKTWNTGITLLLMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQWVWGGYSIGSPTLSRFFTLHFILPFIITAFTIVHLLFLHETGSNNPCGISSDSDKITFHPYYTIKDILGLTLLLLILATLTLLSPDLLSDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALFLSILILTIIPILHKSKQQSMMFRPPSQFLFWLLITTLLTLTWIGSQPVSQPFIIIGQTASMMYFTTILILMPLTSLIENNLL---KWT-------MT--------TMNILLLIMSALAAMAFLTLVERKLLGCMQLRKGPNIVGPYGLLQPFADAMKLLTKEPLKPSTSTTTLYTIAPALAFSIALLLWTPLPMPNPLINFNLGLLFILATSSLTVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLNMLITTQEHLWLLLPSWPLAMMWFTSTLAETNRTPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTATIFLSTSYPVHSPELFTTYFVTKTLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLAFLMWNISMPITISSI-P-PQT--MNP-LAQLIIYITMVTGTLTTLLSSHWFLAWAGLEMNMLAFIPILTKKTNLR-STEAATKYFLMQSTASMILMMAIISNNLLSGHW--TMTNNINQLPSLMMTTALAMKLGMAPFHFWIPEVTQGTSLIPGLLLLTWQKLAPTSIMYQIHSSINTHVLLTL-STLSIITGSWGGLNQTQLRKIMGYSSITHMGWMMMTLTYNPTITILYLTLYIILTTTMFLILNLNSSTTTLTL---SLTWNKSTQLMPLMTSTLMSLGGLPPLTGFLPKWITIQELTMNNNFIIPSIMISMTLLNLYFYMRLIYTISMTLFPTSNNTKMGW-QLENTKPVLPI-------PTLTIISALLLPISPLILIIP---MN-LVLALTINTLLTLLLMIIMFWLPQLNSYAEKTNPYECGFDPLNPARIPFSMKFFLIAITFLLFDLEIALLLSLPWALQTTNLPTMIKSSIALIIILTLSLIYEWTQKG--LDWTE-MSPTFMNIMLAFTISLLGMLVYRSHLMASLLCLEGMVMALFIMSALMASNTHSSLTNIMPIILLVFAACETAVGLALLISISNTYGLDHIHNLNLLECMLKMIIPTTMLLPMTWLSKNNMIWINLTTHSLIISLIPL-LFFNQTNSNLFNHS-IYLSSDPLTTPLLTLTAWLLPLMTMASQYHLWNKPPSQKKLYLSMMISLQITLILAFMATELTLFYILFETTLIPTLIIITKWGNQAERLNASTYFLFYTLTGSLPLLIMLIYIYNNTGSLNITLLTLMDQKLT-TTW-----SHNLAWLACMMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVASLIQTPWSFSGAITLMIAHGLTSSMLFCLANSNYERTHSRIMMLSRGLQTLLPLMTFWWFTANLTNLALPPTINLVGELFVVTASFSWSHITIMLTGLNMLITALYSLHMFTTMQRGKLTHHMINMKPPLTRENTLMFMHLAPMILLSLNPNIILGFTS--------MYTPI-MMTTLASLILPIIAT---LISPNKK-QPYPNYVKTM-MMYAFITSLLPMTLYLSLNQETTIWSWHWMVTQTLDLTLSFKLDHFSVMFTPIALFITWSIMEFSLWYMSSDPNINQFFKYLLIFLIAMLILITANNLFQLFIGWEGVGIMSFLLISWWYSRTDANTAAIQAVLYNRIGDIGLILAMAWFLLHYNSWDIQQMLALKSN-SNFLPLMGLLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVYLLIRFHPLMEDNALAQSLTLCLGAITTTFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLHNEQDIRKMGGLSKTMPLTSTSLLIGNLALTGMPFLTGFYSKDLIIEAMTMSYTNAWALSITLIATS-LTSAYSTRTILLTITGPPRFPALTNINENNPAMLNPIKRLTMGSIIAGFLITNNIPPTSLPQPTMPHYLKLSALCATILGFLMALDLTLMTNKLK--MNNPSQMFKFSNMLGYFPTTIHRMIPHQSLLMSQNLALLLLDSMWLEKSMPKTITHTHITASK--NMTAQKGMIKLYSLS---FLISL--ILTALLMV----------------- +>Capricornis_milneedwardsii_Chinese_serow +----MNENLFASFVTPM-VLGLPLVTLIVLFPSFLFPTSN-RLINNRLISLQQWALQLISKQMMNIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLALMN-ISTTAASITFIILILLTILEFAVAMIQAYLFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKISKHNFYY-NPELT-TTKTPKQ-NNP-W-ETTWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLFSLPVLAAGITMPLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPDVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLAVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIIALMLTTKLTHVSTMDAQEVETIWTIMPAIILITIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSTTLLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPTVQKGLCYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSGLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLSLYMSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAMVHLLFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGAMLLILTLMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALVPFLHTSKQRSMMFRPISQCLFWVLVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVLMPVASTIENNLL---KW--------ML--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYLPELYTINFTIKSLLLTTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILSTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHSPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLDLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMMAILLYNPTMTLLNLVIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKAPIMTVLTLVTLMSMGGLPPLSGFMPKWMIIQEMTKNNNIILPTFMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKRMILL-------PTMTVLSTMLLPLTPILSTLN---MN-LMITLLTNFMLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLSTMLTMALLLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMMAFAMSLMGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNSTIWINPTLHSLLISFTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESLARKKLFISMLILLQLLLIMTFTATELIFFYILFEATLIPTLIIITRWGNQADRLNAGLYFLFYTLAGSLPLLVALIHIQNTIGSLNFLILQYWVQPMP-NSW-----SNTFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-MTDFMSYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVMMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMALHMLPLLLLSLNPKVILGPLY------MNLLSSF-TLTTLILLITPIMAT---SLNTYKS-SNYPLYVKTT-VSYAFITSMIPTMMFIHTGQETVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPKINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLKPD-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFTLLGQPRFPTLITINENNPLLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPYYLKMTALAITALGFILALEISNMTHTLK--FNYPSNTFKFSNLLGYYPAIMHRLAPYTNLTMSQKSASSLLDLIWLETILPKTISTTQMKMST--MVTNQKGLIKLYFLS---FLITI--LTSMILF----------NFHE---- +>Bison_bonasus_European_bison +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLVSNRFVTLQQWILQLVSKQMMSIHNSKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKISKHNFYY-NPELT-PTKMSKQ-NTP-W-EMKWTKIYLP-LL-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSTTLLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG---MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGVCLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMAIAMVHLLFLHETGSNNPTGISSDTDKIPFHPYYTIKDILGALLLILTLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILILIPLLHTSKQRSMMFRPLSQCLFWALVADLLTLTWIGGQPVEHPYITIGQLASIMYFLLILVLMPTAGTIENKLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFTKEPLRPATSSASMFILAPIMALGLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLIITQEQMWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTAILFLGTSYNPHMPELYTINFIIKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILTSGI-P-PLT--MNP-IISIIILSTIMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKNHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLFSGLILLTWQKLAPMSVLYQIFPSINLNLILTL-SILSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLTIYIIMTSTMFTMFMANSTTTTLSL---SHTWNKMPIMTILILATLLSMGGLPPLSGFMPKWMIIQEMTKNNNIILPTFMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFPLMKKMTLL-------PTMVVLSTMTLPLTPMLSVLE---MN-LMLALLTNFTLATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNMMLTMALFLIILLAVSLAYEWTQKG--LEWTE-MSMVYMNIMMAFTVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMAALTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWLSKNSMIWVNSTAHSLLISFTSL-LLMNQFGDNSLNFS-PMFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPMH-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLILNP-MTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSAFSWSNITIILMGLNMVITALYSLYMLIMTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFASF-SLITLLLLTMPIMMM---SFNTYKS-SNYPLYVKTT-ISYAFITSMIPTMMFIYSGQELIISNWHWLTIQTFKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPK-DSNMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLININENNPLLINSIKRLMIGSLFAGYIISNNIPPMTVPQMTMPYYLKTTALIVTILGFILALEISNMTKNLK--YHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKSISFAQMKAST--LVTNQKGLIKLYFLS---FLITI--LISMILF----------NFHE---- +>Mesoplodon_grayi_Grays_beaked_whale +----MNENLFAPFTVPM-MMGIPIITLIIMFPTILFPTPN-RLINNRMISLQQWLTKLTSKQLMNSHSPKGQTWSLMLISLLLFIASTNLLGMLPHSFTPTTQLSMNIGMAIPLWAGTVITGFRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGKTTLVLMS-INLSVALITFMILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLLVILSML-LALFTLLQLKISKHFHYS-NPK-M-TIKSQNQ-QTP-W-NNTWTKIYLP-LS-QSQ-----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGSPDMAFPRMNNMSFWLLPPSFLLLMASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGASSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNSTWAKIHFVIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTSTNLEWLNGCPPPYHTFEEPAFVNP-KWS------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGDLRLLEVDNRMVLPMEMTIRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLENFEKWSTSML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSILLLALGLLTIILTVSQWWRDVIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIYPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIMLGIYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIICFLRQMKFHFTSSHHFGFEAAAWYWHFVDIVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYAHIGRGLYYGSYVFQETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSVDKATLTRFFAFHFILPFVILALTIVHLLFLHETGSNNPTGIPSDMDKIPFHPYYTIKDILGALLLILALLMLTLFAPDLLGDPDNYTPANPLSTPTHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLLFIPLLHTSKQRSMMFRPFSQFLFWLLIADFLTLTWIGGQPVEHPYMIMGQLASILYFLLILVLMPMASFIENKLL---KW--------MF--------MINILTLMLPILLAVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPILALTLALTMWCPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLTTTQEQLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGPFHDPYTPEMYTTNLILKTLLLTMLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMTASI-P-PQT--MNP-LISTIILATLILGTMIVMTSSHWLFAWIGFEMNMMAIIPIMMKNPNPR-ATEASTKYFLTQATASTLLMMAIIINSMYSGQW--TIMNLFNPTASMLMTMALAIKLGLSPFHFWVPEVTQGIPLTTGLILLTWQKLAPLSILYQISPSINLNLMLTM-SVLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILLYNPTLTMLNLLIYIVMTFTMFMLFIQNSTTTTLSL---SQTWNKMPVTTTLTMLTLLSMGGLPPLSGFMPKWMIIQELTKNDTLILPTFMAITALLNLYFYMRLTYSTALTLFPSTNNMKMKW-QFHSTKRMTFL-------PTTIVMSTMLLPLTPMISILL---MN-LLLTLLTNMTLALLLVIIAFWLPQLNTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLNTMLTMALFLISLLAASLAYEWTQKG--LEWAE-MSLVHMNVILAFTLSFVGLLMYRSHLMSALLCMEGMMLSLFVLAALMVLNSHFTLASMMPIILLVFAACEAAIGLALLVMISNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKSNYIWINSTTHSLLISFTSL-LLLNQFNDNSLNYS-LTFFSDSLSAPLLMLTMWLLPLMLMASQYHLLKEPLTRKKLYITMLIMLQALLIMTFTATELILFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALTYLQNTMGTLNLLLLQHWIQPLS-PSW-----SNTLMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRIMPLLNP-LTEHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFLPLMATWWLLASLTNLALPPTINLIGELLVVMSTFSWSNLTIILMGTNIVITALYSLYMLIMTQRGKHVHHINNLAPSFTREHALMALHIMPLLLLSTNPKIIMGPLY------MNLFTSF-TLLTLLILMAPILMS---STNFYKN-NKYQHYVKNI-TFCAFTTSLIPAMMYLHTNQETLISNWHWITIQTLKLTLSFKMDYFSLMFIPVALFITWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRADANTAALQAILYNRIGDIGFLLSMAWFLSNTNTWDLQQIFMLNQN-PLNLPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNKFAQTVALSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALIVGCLALTGMPFLAGFYSKDPIIEAATSSYTNAWALLLTLIATS-LTAIYSTRIIFFALLGQPRFPPLININENNPLLINPIKRLLIGSIFAGFILINNIPPMTTPLMTMPLYLKLTALMMTTLGFILALEISLNTQYLK--YTYISNFSKFSTLLGYFPTIMHRLPPYLNLSASQKLSTSLLDLTWLETILPKTASYIQMKAST--LTSNQQGLIKLYFMS---FLITI--VLSLILF----------NYHE---- +>Tremarctos_ornatus_spectacled_bear +----MNENLFASFTTPT-MMGVPIVVLIIVFPSILFPSPS-RLINNRLISTQQWLVQLTLKQMLSIHNYKGQTWALMLMSLVLFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTIVIGFRYKTKASLAHFLPQGTPFPLTPMLVVIETISLFIQPMALAVRLTANITAGHLLIHLIGKATLALMN-ISIATALITFSILVLLTILELAVALIQAYVFALLVSLYLHDNTMPQLDTSTWFITILSMT-LTLFIVFQLKILEYNYPK-TPELK-PFPPSKK-TMP-W-EKKWTKIYLP-LL-LPQR----MFMDRWLFSTNHKDIGTLYILFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYATWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVATIELTTTNIEWLHGCPPPYHTFEEPTYITL-K--------MAYPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISTMLTTKLTHTNTMDAQEVETVWTILPAIILVLIALPSLRILYMMDEINNPLLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRAVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MAHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTSLLLLGLTTNMLTMYQWWRDIIRESTFQGHHTPVVQKGLRYGMVLFIVSEVFFFTGFFWAFYHSSLAPTPELGACWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHVLQALLITISLGVYFTLLQASEYYEASFTISDGIYGSTFFVATGFHGLHVIIGSTFLIICFLRQLHFHFTSSHHFGFEAAAWYWHFVDIVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSFIDLPTPSNISAWWNFGSLLGVCLVLQILTGLFLAMHYTADTTMAFSSVAHICRDVNYGWVIRYMHANGASMFFICLFMHVGRGLYYGSYLFSETWNIGIILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFTFHFILPFIILALAAIHLLFLHESGSNNPSGIPSNSDKIPFHPYYTFKDILGALLFALILMTLVLFLPDLLGDPDNYTPANPLSTPLHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILVLAIIPLLHTSKQRGMMFRPLSQCLFWLLAADLLTLTWIGGQPVEHPLVIIGQLASILYFTILLVLMPIAGIIENNLS---KW--------MF--------VINIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSVTMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLIFPMWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNALTTILFFGAFHNPYMPELYTVNFTAKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVTLPIITASI-P-PQT--MNP-PILTIIMSTIALGTMIVLFSSHWFMIWIGFEMNMLAIIPILMKKFNPR-AVEASTKYFLTQATASMLLMLGIIINLLYSGHW--TISTTLNPIVSTVITIALAMKLGLSPFHFWVPEVTQGIPLSSGVILLTWQKIAPLSVLYQISPFINPNLLMTM-AITSVLLGGWGGLNQTQLRKILAYSSITHMGWMAAIMIYNPTLMILNLTIYIVMTLGTFMLFMHNSSTTTLSL---SHTWNKLPLITSLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIIMPVFMAITALLNLYFYMRLAYATALTMFPSANNMKMKW-QFETTKKMILL-------PPLIVASTMLLPLTPILSTLD---MN-LILALFTNALLSSLLILIAFWLPQLNVYAEKASPYECGFDPVGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWALQANNLTTVLATALLLISLLAASLAYEWTEKG--LEWAK-MSMVYINIFLAFIVSLTGLLIYRSHLMSSLLCLEGMMLSLFVMLTVTILNNHFTLASMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIILPTVMLVPLTWMSKPNMIWINTTTYSLLTSLISL-MYLNQLSDNSLNFS-PLFFTDSLSAPLLVLTTWLLPLMLMASQSHLSKETLTRKKLYITMLILLQLFLIMTFSAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLHTQNNLGSLNFLMMQYWIQPLP-SSW-----SSIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMLLNP-LTNFMAYPFMMLSLWGMIMTS--SICLRQADLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRIMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNATIILMGTNIIITALYSLYMLITTQRGKYTDHVKNIKPSFTRENALMALHLLPLLLLSLNPKMILGPIY------MNLFTSS-VITTLLMLTMPIILT---STSTYKD-KSYPQYVKTT-ISYAFTISTIPMMMFIFSGQETVISNWHWVTIQTLKLTLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHADPNINQFFKYLLTFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMAMAWFLLNTNAWDFQQIFMIEHK-NFNTPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKAIQTATLCLGAMTTLFTAICALTQNDIKKIIAFSTSSQLG--LMVVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLLKVLPFTSTALIIGTLALTGMPFLTGFYSKDLIIETANTSYTNAWALLTTLVATS-MTAAYSTRIVFFALLGQPRFNPTITINENNPLLTNPIKRLLLGSIFAGYLISHSITPMNVPQTTMPYYLKMAALAVTILGFILALELNLTARNLK--FNYPLSPFKFSNQLGYFPIIIHRFVPMMSLSMSQKAASTLLDATWLENVLPKSISYFQMKSSI--TVSNQKGLIKLYFLS---FMITL--LLSFLVL----------NFHE---- +>Dama_mesopotamica_Mesopotamian_fallow_deer +----MNENLFASFITPM-ILGLPLATLIVMFPSLLFPTSN-RLVNNRLISLQQWMLQLVAKQMMGIHNAKGQTWALMLMSLILFIGSTNILGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALTS-ISTTMALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LTLFIIFQLKISKHNFHL-NPEMT-LTKMQKQ-STP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYINL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSARPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGIYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGILFLVFFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILVLILMPLLHTSKQRSMMFRPFSQCLFWVLVADLLTLTWIGGQPVEYPFIIIGQLASILYFLIILVLMPIISTIENNLM---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-IIFILILSTMMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMTKKHNPR-ATEAATKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISSSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTILILITLLSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTLMAIMALLNLYFYMRLSYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSILE---MN-LMLTLLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVALAGLLMYRSHLMSSLLCLEGMMLSLFVMASLTILNSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIVPTMMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNITGSLNFLVLQYWMQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPSINLIGELFVMMSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-ALVTLLLLTIPIMTT---NFNNHKT-SNYPLYVKTT-ISCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLNPN-DSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSTLLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGIDQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPFLMNSIKRLMIGSLFAGFIISNNIPPMTIPQLTMPCHLKMMALMVTILGFILALEISNMTQNLK--FSYSTNIFKFSNMLGYFPTIMHRLAPYTNLMMSQKSASSLLDMIWLENILPKTTSLIQTKMSI--MVTNQKGLIKLYFLS---FLVTI--TLSIVLF----------NFHE---- +>Plecotus_auritus_brown_big-eared_bat +----MNENLFASFTTPT-MMGLPIVIFIILFPSILFPSTM-RLINNRLVTLQQWLIRVTTKQMMTIHNKKGKTWTLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKASLAHFLPQGTPPLLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGGATLALMN-ISMTTASITFIILVLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITIMSMI-MTLFIMFQLNISKHLYYS-SPGPL-TVESHKY-TNP-W-EIKWTKIYLP-LS-LPLR----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSAVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTMSTTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVVLMVFMVWEAFASKREVLAVELPLTNLEWLHGCPPPYHTFEEPSYVNR-K--------MAYPLQLGLQDATSPIMEELSNFHDHALMIVFLISSLVLYIISLMLTTSLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINDPSVTIKTLGHQWYWSYEYTDYEDLVFDSYMIPTHELTPGQFRLLEVDNRVVLPAELTVRVLISSEDVLHSWAIPSLQLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKYFEKWSSSVL----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSTLLLLIGLTTNMLTMYQWWRDVVRESTFQGHHTPIVQKGLRYGMILFIASEVFFFSGFFWAFYHSSLAPTLELGGYWPPAGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMMQALLITIILGLYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIINDSFIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLRYLHANGASMFFICLYLHIGRGLYYGSYMYTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFLFPFIISAMVMVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLAMITSLLALVLFSPDMLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLIIIPLLHTSKQRSMTFRPLSQCMFWLLVADLLTLTWIGGQPVEHPYIIIGQLASILYFLIITALMPLTSLLENHLL---KW--------MY--------FMNLLITIIPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLQPSTSSLTLFIIAPTLALTLALMMWAPLPMPYSLMNMNLGILFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIVLSILLLNGSFTLSTLATTQEYIWLALPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNVLTATMFLGTYKNPLLPEMFTTNLMIKVLLLTAFFLWIRASYPRFRYDQLMHLLWKNFLPITLVMCMWHTTLPIILASI-P-PLT--MNP-LTFSLIMATMISGTLLVMTSTHWFMVWVGFEMNMLAIIPLLTKQHNPR-STEAATKYFLTQATASMLLMMAATINLLHTGHW--SIMKMINPTASTMMTLALAMKLGLTPFHLWVPEVAQGIPLSSGLIMLTWQKLAPLSILYMITPLMNTTLLMTM-SLLSITIGGWGGLNQTQLRKILAYSSIAHMGWMISILIYNPTMMLLNLYIYIPMTITTFMLLMINSATTTTSM---ARMWNNMPLITAITLIIMLSLGGLPPLTGFLPKWLIIQEMVKNNNITMSTMMALLALLNLYFYTRITYTTSLTMFPTTNNTKINW-QLKNSKQMMCM-------PLMITISTLILPMSPMMLILD---MN-FMLTLLINTLLATLLVTIAFWLPQMNIYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLTSMLLMSLFLISLLIISLAYEWMQKG--LEWSE-MSLTHMNIMMAFIISLLGLLMYRSHLMSSLLCLEGLMLSLFVLITITTLTAHTTLTNMLPIILLVFAACEAALGLSLLVAVSNTYGTDYVQNLNLLQCMLKTILPTIMLIPLTWLSKNNMIWINSTAYSLMISMTCL-PLMNQPCDNSLNLS-LLFFSDSLSTPLMMLTVWLLPLMIIASQHHLSKSSTSQKKLYITMMILLQVFLIMTFSATELIMFYILFEATLLPTLIMITRWGGQTERLNAGTYFLFYTLAGSLPLLVALLYTQNKTGSLNLLLLQYWINPSH-YLW-----TDLAMWLAYMLAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLMLNP-TTNLMAYPFLILSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERTHSRTMLLARGLQMILPLMAAWWLMASLANLALPPSINLMGELFVTMAMFSWSNLSMFPLGINITITALYTLYMLITTQRGKYTYHINSIKPSFTRENTLMSLHLMPLLLLMISPQIILGTPY------MNLLSTM-MIMSLTILALPLMNS---TTNSSSN-NYYPKYAKTM-TSYSFMISLPPTIMFIQSGQEMMISNWHWMTIQTMKLSLSFKLDFFSMMFMPIALFITWSIMEFSMWYMHSDPNISRFFKYLLTFLITMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILSMAWFIMNSNSWEIQQIFALTTE-NTTLPLMGLLLAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMEDNKLIQTMTLCLGAGTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPQLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKLMPFTTTALIVGSLALTGMPFLTGFYSKDLIIETANMSYTNAWALLMTLLATS-LTAVYSTRIIFFATLGKPRHSPLITINENNPMLMNSITRLLIGSIFAGFIISNNVTPSTVPQMTMPLYLKLTALMVTLMGFTIALELNYTTQNLK--HNYPSTMFKFSTLLGYFPHIIHRTGPLTKLFISQKLATMIMDLEWLENMLPKLVSKIQRNSSI--TISSQMGLIKFYFLS---FLITI--TIAMTMF----------NFLE---- +>Hapalemur_griseus_bamboo_lemur +----MNENLFASFITPT-IVGIPIVILIIMAPSIIFPSPS-RLINNRLTSLQQWLIQLILKQLMSMHNPKGQTWSLMLISLILFIGCTNLLGLLPHSFTPTTQLSMNLGMAIPLWAATVIKGFRHKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLALTS-IYLSTAPVTLIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLVTILSMI-LTLLIVFQLKISKFNYPL-NPVMK-DINKHLY-TNP-W-DTKWTKIYLP-LS-LPQQS---MFINRWFYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTAINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKVHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSIGSFISLTAVILMIFMIWEAFASKREVMMVELTPTNLEWLHGCPPPYHTFEEPTYVKA----------MAYPVQLGFQDAASPIMEELLYFHDHTLMIMFLISSLVLYIISLMLTTELMHTNTMDAQEVETVWTILPAAILILIALPSLRILYMMDEITTPSLTLKTMGHQWYWSYEYTDYENLCFDSYMVPSSDLKPGELRLLEVDNRIVLPTELSIRMLISSEDVLHSWAVPSLGVKTDAIPGRLNQATLMASRPGIYYGQCSEICGANHSFMPIVLELVPLKHFEEWLLSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSSTLLSLGMLTNLLTMYQWWRDVVREGTFQGHHTSIVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGNRTHMLQALLITIILGIYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFLRQLNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIMNSSFIDLPAPSNISSWWNFGSLLGACLALQIITGLFLAMHYTADTMTAFSSVTHICRDVNHGWIIRYLHANGASMFFLCLFIHIGRGLYYGSFTLSETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMVHLLFLHETGSNNPLGTSSDSDKIPFHPYYTIKDLLGLMFLILLTMILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILAIIPMLHTAKQRSMTFRPLSQSMFWILTADLFILTWIGGQPVEYPFITIGQMASILYFSLILIIMPMVSLIENKLL---KW--------MF--------MINLFLLIIPILLAMAFLTLVERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALSIALVMWIPLPLPYPLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHMPETYTTSFAIKTLLLTTMFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLTSCI-P-PQM--MKP-IILVLIMLTIFTGTMLTMISSHWLLMWIGLEINMLAIIPILMKKINPR-SMEAATKYFLTQATASMLLMFSIVISAVNSGQW--GITNMHNQLMSLMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQMYSSMNPNILLLI-AILSILVGGWGGLNQTQLRKILAYSSIAHMGWMMAILMYCPSLTMLNLLIYLMLTVALFSMLNINVNTTMLAL---SNMWNKTPAIIFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYMRLIYSTSLTMFPTLNNTKMKW-QFQQTKQTFLL-------PMLTTLATLTLPLSPALLTLN---MN-LPLALTTNITLTMLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQANNLKLMLTVALVLITILAAGLAYEWLQKG--LEWME-MPSISTNITLAFITALLGMLIFRSHLMSSLLCLEGMMLSMFILSTLTILSLHFTTSFMMPILLLVFAACEAAVGLALLVTVSNTYGLDYIQNLNLLQCMLKFIIPTIMLFPVTWCSSNSMIWINTTLHSLMISLTGL-LLLNQHND-NNNFS-LIFFSDSLSSPLVILTMWLLPLMIMASQHHLTKEPWTLKKLYLSMLISLQMFLIMTFTATELIYFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYIQNYLGSLNLSTMSLCFQELP-NSW-----SNNLLWMACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMILNP-MTKYMAYPFLMLCLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATVLMIAHGLTSSMLFCLANSNYERIHSRTMLLARGIQALLPLMATWWLFASLTNLALPPSINLIGELLVIMTSFSWSNITIILMGLNTLITALYSLYMLTTTQRGKLTYHTHNLNPTFTRENTLMSMHILPLLLLTLNPKIILGPTY------MNLLSSF-TLVTLIILTLPIIMN---ITNTYKN-YSYASHVKSS-IACAFTTSLVPTMLFISSGQETIVSNWHWMTIQTLKLSVSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLMYSNTWEFQQMFMLNYY-PDMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNKTIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTMGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKPMPFTSSSLMIGSLALTGMPFLTGFYSKDLIIESANTSNTNAWALMITLIATS-MTAIYSTRIIFYALLGQPRFTALTPINENNPLLINSIKRLAFGSIFAGFFLTNNIPPMNIPQMTMPLYLKLTALMVTIMGFALAMELNLMTNNLK--FKLPSHNYKFSNSLGFYPMTMHRSIPLSNLIMSQNTASLLLDLVWLEKTMPKNLSQLQMTSST--NISNQTGSIKFYFLS---FLMSL--LLTLLLII----------------- +>Litocranius_walleri_gerenuk +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWILQLISKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTAFITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYH-NPELT-LTKTLKQ-STP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINMRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILALMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHMSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPVASTIENNLL---KW--------MF--------MVNILTLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILTTVLLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNSTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLDLILTL-SILSITIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPVMTVLILVTLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPITKQMTLL-------PTMITLSTMLLPLTPILSILE---MN-LMLALLTNLTLATLLVTIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIFPTMMLMPLTWLSKSAMIWLNSTMHSMLISFTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYIQNTMGSLNFLILQYWVQPMS-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQMFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLIMTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNMFSSF-TLVTLLLLTMPIMMT---SSNIYKT-PIYPLYVKTT-ISCAFLTSTIPTMMFIYTGQEAVISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLMNLNTWDLQQIFMLNPS-NSNLPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNSFLINSIKRLLIGSLFAGFIISNNIPPMTIPQMTMPYYLKTTAMAVTILGFILALEISNTTYYLK--FKYPSNAFKFSNLLGYYPTIMHRLTPYANLTMSQKSASSLLDLIWLENILPKTTSLIQMKMST--MVTNQKGLIKLYFLS---FLITI--LVSTILL----------NFHE---- +>Niviventer_confucianus_Chinese_white-bellied_rat +----MNENLFASFITPT-MMGLPIVVTIIMFPSILFPSSE-RLISNRLHSFQHWLIKLIIKQMMLIHTPKGRTWALMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVILGFRHKLKNSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMD-ISPPTATITFIILLLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIVSSM-ATLFILFQLKISTQTFPA-APSLK-VLTTEKT-KNP-W-ESKWTKIYLP-LS-LPQQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLVMIFMIWEAFASKREVLSVSYSSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAYPFQLGLQDATSPIMEELTNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSTILLSLGLLANILTMYQWWRDIIREGTYQGHHTPIVQKGLRYGMILFIVSEIFFFAGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITILLGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIINHAFIDLPTPSNISSWWNFGSLLGLCLMVQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGMYYGSYTFLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILIMFLILMTLVLFFPDMLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILALLPFLHTSKQRSLTFRPITQTLYWILVANLFILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIEDKML---KWN-------MY--------FINILTLLVPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGVLQPFADAMKLFMKEPMRPLTTSMSLFIIAPTLSLTLALSLWIPLPMPHPLINLNLGMLFILATSSLSVYSILWSGWASNSKYSLFGAIRAVAQTISYEVTMAIILLSVLLMSGSFSLQMLITTQEHIWLLIPAWPMAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTTIIFLGPLYYINLPELYSTNFMMETLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIFTAGI-P-PYT--MNP-ITIIIIYFTIFVGPVITMASSNLLLMWVGLELSLLAIIPLLTNKKNPR-STEAATKYFITQATASMIILLAMVLNYKQLGMW--TFQQQTNSMLINLVLISLSMKLGLAPFHYWLPEVTQGIPIHMGLILLTWQKIAPLSILFQIFHLLNPTITTIL-AISSIFIGAWGGLNQTQTRKIMAYSSIAHMGWMMAILPYNPNLTLLNLVIYIILTIPMFITLTMNSSTTISSI---SLLWNKTPMILSMTSLILLSLGGLPPLTGFLPKWAIISELLKNNSTTMATLMAMMALLNLFFYTRLIYSTSLTMFPTNNNSKMVL-HHPNFKHNFIM-------PTLTVISTLTLPLSPRTH------MN-LFIIITINISLSLTLVLIAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTTNTPMMITVAFILITILALGLSYEWSQKG--LEWTE-MTSAFLNLTLAFSLSLLGTLMFRSHLMSTLLCLEGMMLSLFIMTSMSTLNSNSMVSMPIPITILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIILPSLMLLPLTWLSENKKVWTNVTSYSFLVSLLSL-TLLWQNDENYLNFS-TTFSSDPLSTPLIILTTWLLPLMILASQNHMKKEPLSHQKLYISMLISLQALLIMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLVGSIPLLIALISIQNSTGTLNFLILSLLTHPLD-STW-----SNNILWLACMMAFLIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDP-LAKNMAYPFIMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIAAIMIQTPWSFMGATILMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMIFPLMATWWLLASLANLALPPLINLMGELFIVMSMFSWSNPSIILMAVNIVITGMYTMYMIITTQRGKLTNHMNNLQPSHTRELTLMALHIIPLILLTTNPKLITGLTS------MNMMTSS-ILMILILLATPIIIS---STNLTKI-INYPSYATSS-IKYSFFLSLLPLLLFFHYNTEYMITSWHWITINSVKLTMSFKIDYFSILFLSVALFVTWSIMQFSSWYMHSDPNINRFIKYLMLFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMTWFCLNMNSWELQQIFLT-NS-SDLVPLSGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFHPLTSNNSTILTAMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGNMMKTMPFTSSCFIIGSLALTGMPFLTGFYSKDLIIESINTCNTNAWALMVTLIATT-MTAMYSMRIIYFVTMTKPRYSPLIIMDESNPDLINPIKRLALGSIFAGFLISLNIPPTNIPMLTMPWYLKVTALLISIMGFAMALELNNLTLNFS--MKTTSKPASFSTSLGYFPSIIHRIIPQKTLNPSYKLSSNLLDTIWLEKTIPKSTSITHAYMSK--MMTNQKGLVKLYFLS---FLITI--SLIFTLYII---------SPEWFQ- +>Mystacina_tuberculata_ +----MNENLFASFITPT-LMGLPIVVLIIMFPTILFPSSN-RLINNRLIAIQQWLIHLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVVLGFRHKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISKATALITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMV-LTLFIIMQLKVSKHSYYS-TPEPM-TTKALKQ-TTP-W-ESKWTKIYSP-LS-LPLR----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNTTWAKIQFLVMFVGVNATFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLLIFMIWEAFAAKREVSLVELTTTNIEWLHGCPPPYHTFEEPTYVNI-K--------MAYPFQLGFQDATSPIMEELLNFHDHTLMIVFMISSLVLYLIAAMLTTSLTHTSTMDAQEVETIWTILPAMILITIALPSLRILYMMDEINNPCMTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKYFEKWSAAML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSIPLLILGLITNMLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGIIPLNPLDVPLLNTSVLLASGVSITWAHHSLMDGNRKHMIQALFITICLGLYFTILQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNTSFVDLPAPSSLSSWWNFGSLLTICLAVQIATGLFLAMHYTADIETAFSSVSHICRDVNYGWLLRYLHANGASMFFICLYLHVGRGLYYGSYMFLETWNVGVALLFAVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGTDMVQWVWGGYAVDKATLTRFFAFHFILPFIIAALVMVHFLFLHETGSNNPTGIPSDLDLIPFHPYYTIKDILGFVFMLTALLTLVFFSPDLLGDPDNYSPANPLSTPLHIKPEWYFLFAYTILRSIPNKLGGVLALVLSILILVALPMLHTSKQRSMTFRPISQFLFWLLVADLLTLTWIGGQPVEHPYMLIGQTASILYFSLILIFMPLAGIAENHLM---KW--------MF--------LINLLLMIVPILLAVAFLTLVERKVLGYMQLRKGPNVVGPHGLLQPIADAVKLFIKEPLRPLTSSIMMFIIAPILALTLALTMWVPLPMPYPLINMNLSILFMLAMSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSYTLSTLIITQEYIWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNVLTTILFLGAYHNPVMPELYSVNFMLKALLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVAMPVIMASI-P-PQT--MNP-LIFSMIMTTVILGTMIVMTSSHWLLIWIGFEMNMLAIIPILMKNYNPR-SMEASTKYFLTQATASMLLMLAVVINLLYSGQW--TITKMINPTASIIMTLALAMKLGLAPFHFWMPEVTQGISLSSGLILLTWQKLAPLSVLYLISPSINMNMLLLM-ALASVAIGGWGGLNQTQLRKIMAYSSIGHMGWMAAILVYNPTMTLLNLSLYIAMTLSTFMLFITTASTTTLSL---SHMWNKMPLITTIILTLMLSLGGLPPLTGFMPKWMIIQELTKNQSIIIPTIMAITALLNLFFYMRLTYATSLTMFPTTNNTKIKW-QFENTKWMTYM-------PPLIIISTMILPLTPMTVLLD---MN-MALTLLVNTLLASLLVMIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNELATMLPTSLFLISLLAISLAYEWSQKG--LEWTE-MSLTYMNILVAFVISLTGLLMYRSHMMSSLLCLEGMMLSLFVMVTITILNTHLTLASMMPIILLVFAACEAALGLALLVMVSNTYGVDYVQNLNLLQCMLKIIMPTIMLIPLTWLSKGNMIWINTTMYSLLISLLCL-PLINQFSDNSLNLS-LMFFSDSLSTPLLMLTTWLLPLMIIASQFHLAKESQTRKKLYITMLVLLQIFLVMTFTATELILFYILFEATLVPTLIIITRWGGQTERLNAGLYFLFYTLAGSLPLLVALIYIQNIMGSLNFLLMQYWAEPLP-TSW-----SSTLMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTVLCP-LTEFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTILPLMAAWWLLASLTNLALPPTINLIGELFVVVSTFSWSNLSIILMGLNIIITALYSLYMLIMTQRGKYTYHINNIKPSYTRENTLMAMHMFPLLLLSINPKIILGTLY------MNLFSSS-LILSLIILVIPVAIS---MSNAQNR-VNYPNYVKTM-ISYSFMISLIPTTLFIYSGQEMMISNWHWITIQTMKLSLSFKLDYFSMLFMPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYARADANTAALQAILYNRIGDIGFIMAMAWFMMNSNSWELQQIFILDLN-DNTFPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLAQTMILCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKAMPFTTSALIVGSLALTGTPFLTGFYSKDLIIEAANTSYTNAWALLTTLIATS-LTAVYSTRIIFFALLGQPRFPSLILINENNPLLINSIKRLLIGSIFAGFLISNNITPMTIPPMTMPMYLKTTALLVTLLGFIMAMELNLETQNLK--FKSPSNQFKFSNMLGYYPAIMHRLPPMLNLMASQKSASLLLDLIWLESMLPKSISYFQLKTST--LVSNQKGLIKLYFLS---FLITL--VLALTLF----------NFHE---- +>Hyemoschus_aquaticus_Water_chevrotain +----MNQNLFASFITPT-MMGLPIVILIITFPSILFPTPN-RLTNNRLVSLQQWLVQLTTKQMLSMHNKKGQTWALMLVSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKNSLAHFLPQGTPTLLIPMLIIIETISLFIQPVALAVRLTANITAGHLLMHLIGSATLALLN-ISTTTALITFIILILLTMLEFAVAMIQAYVFTLLVSLYLHDNSMPQLNTSTWFITILSML-SALFILFQLKISKYTYFT-GPEST-SIKTQKQ-NTP-W-ELKWTKIYLP-LS-LPQP----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNSTWAKIHFIIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTATNLEWLNGCPPPYHTFEEPAYINS-K--------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVITLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLDYFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSIILLTIGLTTNMLTMYQWWRDVIRESTFQGHHTSTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIQPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGHRNHMLQALFITISLGVYFTLLQASEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKSHPLMKIINNAFIDLPAPSNISSLWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYIHANGASMFFICLYMHMGRGLYYGSYTFTETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIVTALAFVHLLFLHETGSNNPTGIPSDMDKIPFHPYYTIKDALGALLLILALMVLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIMSILILLLMPLLHTSKQRSMMFRPLSQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIAYFSIILVLMPMAGLIENKLL---KW--------MF--------MVNILTLIIPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPVADAIKLFTKEPLRPATSSVAMFIMAPILALGLALTMWIPLPMPFPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLITTQEHLWLIFPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAYHNPWMPELYTVNFTIKALFLTVLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPIFLSSI-P-PQT--MNP-IIHILILMTLVFGTIIVMISSHWLFAWIGFEMNMLAIIPIMMKKYNPR-AMEAAVKYFLTQSTASMLLMMAVIINLMFSGQW--TIMNMLNPTASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPISILYQVSPSINLNMMLTM-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMMAILIYNPTMTLLNLTIYIIMTSTMFSLFMANSTTTMLSL---SHTWNKAPVMTALILLTLLSMGGLPPLSGFMPKWMIIQEMTKNDNVILPMFMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFNSTKQPLLL-------PTMTVLSTMLLPLTPMLSIME---MN-LLLALLTNFTLAALLVVIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTEDLATMLTMALFLLSLLAASLAYEWTQKG--LEWTE-MTLVYMNIMIAFTVALVGLLMYRSHLMSSLLCLEGMMLSLFILATLTILNTHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKFIIPTIMLLPLTWLSKNNMVWINPTTYSLLISLTSF-LLLNQYGDNSLNFS-PTFFSDSLSTPLLILTMWLLPLMIMASQNHLLKEPIIRKKLYISMLIILQLLLIMTFTAMELIFFYILFEATLIPTLIIITRWGNQAERLNAGLYFLFYTLTGSLPLLVALVYIQNTTGSLNFLMLYYWAQPLP-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTILNP-LTEIMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVIMSTFSWSNTTIILTGLNMVITALYSLYMLITTQRGKHTYHINNITPSFTRENALMALHILPLLLLTLNPKIILGPLY------MNLFSSL-SLLTLFLLTVPIMMT---STDLYKT-ATFPQYVKTT-VSCAFFTSLIPTMMFIHTGQEAVISNWHWMTIQTLKLTLSFKMDYFSMLFVPVALFVTWSILEFSMWYMHSDPDINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGVMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFLVAMAWFLFNLNTWDFQQIFVLCPN-IPNLPLLGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSTMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANMSHINTWALLMTLIATS-LTAAYSTRILFFTLLEQPRFPPLISINENNPLLTNPIKRLMIGSIFAGFIISNNIPPTTIPQMTMPLHLKLTALLVTIAGFIIALEMSNLTKNLK--LNHPSSMFKFSVLLGYFPTLVHRLVPYLNLSMNQKSASSLLDLIWLEKILPKSTSHVQMKLSV--LVTNQKGLIKLYFLS---FLVTI--SISTIIF----------NFHE---- +>Tragelaphus_eurycerus_bongo +----MNENLFASFITPV-ILGLPLVTFIVLFPSLLFPTSN-RLVNNRLISLQQWALQLVSKQMMTIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKAALAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTAFITFTILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTVIMSMF-LTLFIIFQLKISKHNFYH-NPEPI-TTKMSKQ-NTP-W-EKKWTKTYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIQFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPVYVNL-K--------MAYPMQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVEIIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTPELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLEYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMILLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGHRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGMYYGSYTFLETWNIGVILLFTVMATAFTGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPTGISSNMDKIPFHPYYTIKDILGALLLILTLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHMSKQRSMMFRPLSQCLFWILAADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVLMPVTSMIENNFL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSVSMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSMPILLAGI-P-PQT--MNP-IIFVTILLTIMLGTIIVMISSHWLFVWIGFEMNMLAIIPIMMKNHTPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPVASMIMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPIMTVLVLVTLLSMGGLPPLSGFIPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLAYTTALTMFPSTNNMKMKW-QFSTTKRMTLL-------PTMIILSTMLLPLTPMLLILE---MN-LMMALLTNFSLATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLAASLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMAALTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTTMLMPLTWMSKNNMIWINPTMHSLLISLTSL-LLMNQFGDNSLNFS-PTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALLYIQKTVGTLNFLVLQYWVQPVS-SSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITLLLNP-TTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMMAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNATIILMGVNMVITALYSLYMLIMTQRGKHTHHINNISPSFTRENALMSLHIIPLLLLSLNPKIILGPLY------MNMFSSF-TLITLLLLIMPVMMS---SSNTYKT-PNYPLYVKTS-ISYAFFTSTIPMMMFIHTGQETIISNWHWLTIQTLKLSMSFKMDYFSTMFIPVALFVTWSIMEFSMWYMHSDPDINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLINLNAWDLQQIFMLNPS-NSNMPLLGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLIQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGVPFLTGFYSKDLIIETANTSYTNAWALLLTLIATS-FTAIYSTRIIFFTLLGQPRFPTLVAINENNPLLINSIKRLLIGSLFAGFIISNSMPPMTVPQMTMPFYLKTTALMITILGFILALEISNMTQNLK--LYHPSNSFKFSNMLGYFPTIIHRLIPYANLTMSQKSASSLLDLIWLENILPKTISLTQMKMSI--MVTNQKGLIKLYFLS---FLVTI--LISMILF----------NFHE---- +>Tachyglossus_aculeatus_Australian_echidna +----MNENLFASFITPT-ILGISILPLIMIFPCLLFSAPN-RWMPNRLVALQLWLVRMVTKQMMSMHNKQGRMWTLMLITLIMFIASTNLLGLLPYTFTPTTQLSMNMGMAVPLWLGTVLMGFRNKPKSSLAHFLPQGTPTPLIPMLIIIETISLFIQPVALAVRLTANITAGHLLIHLIGSATLALSS-ISLTVSTITFTILFLLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFMAILLMV-FTIYGIFQLKVVKYLPTVLPTPSTQAMP-VTN-LTP-W-NSKWTKIYLP-HS-SLLQS---MFINRWLFSTNHKDIGTLYLLFGAWAGMAGTALSILIRSELGQPGSLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLVSSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGDIKWTPPMLWALGFIFLFTVGGLTGIVLANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLLSGFTLHTTWAKVHFTLMFVGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNAISSLGSFISLTAVMVMIFMVWEAFASKREVLTVELTSTNIEWLHGCPPPYHTFEEPVYIKI----------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISTMLTTKLTHTNTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPNLTIKTMGHQWYWSYEYSDYEDLSFDSYMIPTQDLTTGQMRLLEVDNHLVMPIELPIRMLISSEDVLHSWALPSMGLKTDAIPGRLNQATITSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSSSMMSTS-------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLMMWFHFNNPTLLVLGLLTNLISSYQWWRDIVREGTYQGHHTKVVQKGLRYGMVLFIISEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGISPLNPLEVPLLNTSILLASGVSITWSHHSLMEGNRKQMIQALMITIALGLYFTALQAMEYYESSFTISDGVYGSTFFVATGFHGLHVIIGTTFLITCLLRQLLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MHNPRKTHPLIKIVNHTFIDLPTPSNISSWWNFGSLLGMCLIVQILTGLFLAMHYTADTTTAFSSVAHICRDVNYGWLIRYLHANGASLFFICIFLHVGRGLYYGSYMNTETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFVVAALTIIHLLFLHETGSNNPSGLNSDSDKIPFHPYYSIKDLLGFFIATLALMLLVLFTPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVASIMILALIPMLHTSRQRGLTFRPLTQTLFWILVTNLLTLTWIGGQPVEQPFILIGQLASILYFLLITVLIPFAGSLENNLL---KW--------MF--------LINLLLLIVPVLLAVAFLTLIERKILGYMQFRKGPNIVGPHGLLQPIADAVKLFIKEPLRPLTSSIYMFILAPILALSLALTIWVPLPMPLPLIDLNLGLLFILSVSGLSVYSILWSGWASNSKYALTGALRAVAQTISYEVTFAIILLSIMLINGSFTLTTLNLTQEFMWLVVPTWPLMLMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIIMNALTVILFFGTYHLIFLPELSTTNFMVKTMLLTSLFLWVRASYPRFRYDQLMHLLWKNFLPITLVTCLWYIMFPTMLSGT-P-PQM--MTP-MTNLIMMSSLLMGTMITLTSSHWLLMWMGLEINTLAIIPLLTSKKHPR-STESAIKYFLTQATASMLLMFAASLNTWLTGHW--TLMQINNMVPSMIMTFALAMKLGLAPFHYWVPEVLQGSPLLSGMILLTWQKLAPISIIYQISPTLNMNTLLIL-AISSILLGGWNGLNQTQLRKIMAYSSIAHMGWMIVIIIYFPLLTILNLVLYIMSTVALFMVFYHINITKTKPL---SLMWNKSPTLMLTTILVLLSLGGLPPLTGFAPKWLVVQELIMHNNIMMATTLAIMALLNLFFYMRIIYSSTLTTFPTTNNNKYHW-YKQPMKTPLSL-------PPLTILSTALLPLTPMFITLG---MN-LLISLLINTCLATILVVVAFWLPQLYTYLEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIAILLPLPWASQTSSPYLLLGLSGVLLTLLTLGLAYEWLQKG--LEWTE-MTTMFFNLLLAFMVALMGVYIYREHLMSTLLCLEGMMLSIFIMVSLILLHHHLNSTMMFPLILLVFSACEAGVGLALLVKTSNSYGTDYIDNLNLLQCMLKILLPTVMLLPLISFSKKEWMWINSSAYSILISSLSL-LTLNQHMDLGLNFN-LNFFTDPLSSPLLVLSCWLLPLMILASQFHLMNESTTHKRMYLILLVSLQVALLMAFSAVEFMMYYILFETTLIPTLIIIARWGNQTERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGSLHILLLTLTPNPLL-NSW-----SNDILWLACMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEP-ISKLMAYPFIILATWGMIMTS--SICLRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGLNTVITAIYSLYMLTSVQRGKMTTHSLSINPTFTREHMIMALHLLPLILLTLNPKLILGVAY------MNLMFTSTLLMSLIILLIPLLTS---YTPFYKL-TTYPHHVKNM-TMWSFIISLFPLLLFLNQGFESTVTNWHWFTSQTLGLTMNFKVDLYSIIFLPIALLVTWSIMEFSIWYMSSDPKINQFMKYLLIFLITMLTLISASNLFQLFVGWEGVGVMSFMLIGWWHARTDANTAAMQAILYNRIGDIGFILAMAWFIMNSNSWELNQIFLLHMD---LLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFSPMFERNYVALTVALCLGAITTLFTAACALTQNDMQKIVTFSTSSQLG--LMMVTVGLNQPFLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLVNTLPITSSALIIGSLALTGMPFLAGFYSKDSIIESLNMSNANAWALCLTLVATT-FTAVYSTRLVFLALLNQPRFSPMSMINENNPLLINPIKRLACGSVIAGFLLTTFINPTTLNPTTMPLYIKMAAITVTLLGFLLALELYMATNNLT--HKPHSQIYSFSNLLGYFPLIIHRKPTTQNFSLSQSMATMLIDLTWFEKSGPKGISAQQMTFSS-SITETQKGLMKIYFLS---FLITP--LIIIMFFLT---------------- +>Ratufa_bicolor_black_giant_squirrel +----MNENLFASFITPT-MMGLPIVIIIVLFPSILFPSPN-RLVNNRVISLQQWLIHLILKQMMMMHNKKGQTWSLMLISLIIFIGSTNLLGLLPYSFTPTTQLSMNLGMAIPLWAGAVITGFRYKAKASLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTS-ISPPAAMITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIVSMF-LTLFIMIQLKIANHPYPL-TPQIK-STKSDKP-KSP-W-NNQWTKIYLP-LS-LPLQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDLTWAKIHFTVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYAAWNTISSMGSFISLTAVMIMVFMIWEAFSSKREVLIVELTTTNMEWLHGCPPPYHTFEEPAYVKA----------MAYPFEFGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINDPSLTVKTMGHQWYWSYEYTDFEDLNFDPYMIPTTDLKPGELRLLEVDNRPVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKHFETWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSNSLLMLGMTTNLLTMYQWWRDVIREGTFQGHHTTIVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMIQALTITIALGLYFTLLQASEYLESSFTISDGIYGSTFFMATGFHGLHVIIGSTFLLVCLLRQLNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLFKIINHSFIDLPTPSNISAWWNFGSLLGLCLIIQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGFYYGSYTYLETWNIGVILLFVVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTALVEWIWGGFSVDKATLTRFFAFHFILPFIVAALAMVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDALGVILLLLLLTTLVLFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVMSILILILLPSLHMSKQRSMAFRPLSQCLFWMLVADLFTLTWIGGQPVEYPFIIIGQLASILYFTLILIIMPTASLIENKLL---KW--------MF--------LLNLLLLIIPVLLAMAFLTLVERKMLGYMQLRKGPNVVGPYGLLQPFADAMKLFIKEPLKPLTSSTTLFIVAPLLALTLAFTMWIPMPMPQPLINMNMGVLFILATSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIHTQQQVWLLLPSWPLAMMWFVSTLAETNRAPFDLAEGESELVSGFNVEYAAGPFALFFMAEYMNIIMMNALTTILFLGAFFNPTSPETFTLNFVLKTLILTSVFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPILTACI-P-PQT--MNP-FTFSAIYLTLFSGTLIVLLSSHWLLTWVGLEMSMLAIIPILIHKANPR-STEAASKYFLVQATASMILMMSAIINYISSGQW--TLTNISNQISPLLFTLALSMKMGLAPFHLWVPEVTQGIPLMSGLILLTWQKIAPISIMYQISPLVDCTLLMTL-SILSIMLGGWGGLNQTQLRKIMAYSSIAHMGWMMAIITFNPMLTMFNLIIYILLTISMFTMFNYNKTTTTSTL---SLTWNKYPLFTSMMLVILLSLGGLPPLTGFAPKWMIIKELISNNNIIMSLSMAMLALLNLFFYSRLIYSTTLTLFPSPNNTKMKW-QFENTKLTLLL-------PTMIILSTTTLPLTPMILTLT---MN-LMISLTINIMISLILIMIAFWLPQLNIYAEKASPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWALQINNLSLMLTVALLLVLILTLGLAHEWLQKG--LEWIE-MPMIMLNIFLAYTASLLGMFIYRSHLMSSLLCLEGMMLSMFVLTTLATLTNHFPLSFMIPIILLVFAACEAAVGLALLVMVSNTYGLDYVQNLNILQCMLKIILPTISLIPLMWFSKNSMIWINSSIHSFMISFVTL-FMLYQSHDGNLTFS-TNFFSDPVSAPLLVLTTWLLPLMMLASQNHLSNETLLRKKLYILMLILLQVFLVMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNSAGSLNFILFSYWTNNLS-QSW-----SNSTLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMIRISTILHP-ITTSMAYPFLMLSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQSPWSFMGATALMIAHGLTSSMLFCLANTNYERTHSRTMLLARGLQSILPLMAAWWMLASLTNLALPPSINLIGELFIILSSFSWSNMTIILMGLNMLITALYSLYMLITTQRGKFTYHITDITPSFTRENTLMLLHMLPLILLSTNPTIILGHLY------MNMLPSF-ILMSLVTLTFPIFTS---MLNLHKP-IDYPRYVKTS-IVLAFLFSMIPMLAFINSNYETIISNWHWMTIQTFNLTMSFKLDYFSMLFMPVALFVTWSIMEFSMWYMHSDPFIDRFFKYLLMFLITMMILVSSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVMAMAWFLTHSNSWEFQQLFMM--D-TTLLPLVGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKTIQTLALCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNNEQDIRKMGGLFKILPFTSSSLMVGSLALTGIPFLTGFYSKDLIIESANTSYTNAWALIITLIATS-LTAAYSTRIIFFALLNQPRYPPLAPVNENNPHLINPIMRLLIGSIFAGFLMSKNIPTMNMPPMTMPLYLKITALLVTIAGFTIAMELNNLSSNLK--ITYYSNPSKFSTMLGYFPTIIHRLHSKLSLSMSQKSASTLLDLIWLEKAIPKLTAEIQVKASL--MTSSHKGLIKLYFLS---FLLSF--ILASTTLI---------YLPV---- +>Nanger_dama_Dama_gazelle +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLMNNRLISLQQWALQLVSKQMMSIHNPKGQTWALMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYH-NPEPM-PTKTLKQ-STP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSVALLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINTRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILALMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPVAGTIENNLL---KW--------MF--------MVNILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWMIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILTTVLLGTTIVMISSHWLLIWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPIMTVLVLATLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSITKQMTLL-------PTMVTLSTMLLPLTPILSVLE---MN-LMLALLTNLTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLVILSSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIFPTMMLMPLTWLSKSSLIWVNSTTHSLLISFTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQTFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALIYVQNTAGSLNFLILQYWVQPLS-NSW-----SNVFTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQMFLPLMATWWLLASLTNLALPPTINLIGELFVVMSAFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTYHINNILPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLVTLLLLTVPIMMT---SSDTYKT-SNYPLYVKTT-ISCAFLTSMIPTMMFIYTGQEMVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLMNLNTWDLQQIFMLNPS-NSNLPLIGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSTMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPTTVPQMTMPHYLKMMALTVTILGFILALEISNTTYSLK--FKYPSNAFKFSNLLGYYPTIMHRLTPYANLTMSQKSASSILDLIWLENILPKTTSLIQMKMST--VVTNQKGLIKLYFLS---FLVTI--LVSTILL----------NFHE---- +>Nannospalax_judaei_Judean_mountains_blind_mole_rat +----MNENLFASFATPT-LMGLPIVIPIIMLPTLFFKTTN-KLINNRVTTAQQWLIKLITKQMMFTHSPKGRTWSLMLTSLIIFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPMWAGAVILGFRHKTKASLAHFLPQGTPIILIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLTT-ISPSTASITFLILTMLTILELAVAMIQAYVFTLLVSLYLQDNTMPQLDTSTWSTVIMASL-VTLFIILQLKLSLFSLTP-APSLK-QTKLNKT-HNP-W-DKKWTKIYLP-LS-LPLH----MFITRWLFSTNHKDIGTLYLMFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVVVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAVTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFIHWFPLFTGFSLSETWAKIHFAVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNVISSMGSFISLTAVMIMVFMVWEAFASKREVEAVELASTNLEWLHGCPPPYHTFEEPTYVKV-N--------MAYPLQYGLQDATSPIMEELMNFHDHTLMIVFLISSMVLYVITAMLTTRLTHTNTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPALTVKAMGHQWYWSYEYTDYEDLNFDSYMIPTSELKPGELRLLEVDNRVVLPVELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATITSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSSTMV----------MTHQTHAFHMVNPSPWPLTGALSAFLLTSGLIMWFHFNSFILLTIATAGNILTMYQWWRDVVREGTFQGHHTPPVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGINPLNPIEVPLLNTAVLLASGVSITWAHHSLMEGKRNHMIQALLITIILGLYFTLLQASEYLEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLLTCLLRQLNFHFTSKHHFGFEAAAWYWHFVDVIWLFLYVSIYWWGS--MTNLRKSHPLIKIINHSLIDLPTPSSISTWWNFGSLLGVCLGLQIITGLFLAMHYTSDTLTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGIYYGSYHFKETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMVHLLFLHETGSNNPSGLDSNADKIPFHPYFTIKDTLGALMLTIILMSLVLFYPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPMLHTSTQRSLTFRPISQLLFWMLVADLITLTWIGGQPVEHPFIIIGQVASILYFSIILILMPLAGLVENTIM---KL-------------------MNMLALLLPILVAMAFLTLVERKTLGYMQLRKGPNVVGPYGVLQPFADAMKLFTKEPLKPLTASLTLFIIAPTLALTLALSLWIPLPMPYPLLNLNLGTLFILATSSLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLLSGSFSLLSVISSQELTWFLLPTWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFLGTVYNPHNPELFTLNFMLKTLILTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISMPMTMASI-P-PYT--MNI-LALTIILLTIFVGSIITILSNHLILMWAGLEMSMLAIIPVLMFNSNPR-STEAATKYFLIQATASMILLLAIILNYHDLGIW--QFHHNTQFYIYSLVLIALMMKLGLAPFHFWVPEVTQGVPILSGLLLLTWQKIAPLAIMFHISYYLNTTMVPLS-ALMSVFIGGWGGLNQTQLRKILAYSSIAHMGWMVAVTMYNPTMMLLNLVIYMFLTTSMFITVYICTSTSISSF---TKMWNKSPLLISTTLIILMSLGGLPPLTGFLPKWMIIIELTKNNCIFMALSMTMMALLNLYFYTRLIYASSMTAFPTSNNMKTNT-HHQNNKKHPLL-------SPLIIISSLALPLSPLVSSLY---MN-LLITMMTNISLSMVLVSVAFWLPQLNLYSDKASPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPIPWAIQYGNLTGVVLTTLGLLIILALGLMYEWFNKG--LEWTE-MTPVFFNLLLTFILSLLGALMFRSHLMSTLLCLEGMILSLFTMTSLITLNTNSMLSFIIPIIILVFAACEAAVGLALLVMVSNTYGTDYVQNLNLLQCMLKIILPSIMLLPLTWFTNNKMVWTNTTCYSLMISLISL-SLLHQDSTNSYNFS-TTFFSDPLSTPLVILTTWLLPLTLLASQNHLSKEQENYKKMYISLLTLLQVFLIMTFTATELMLFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLISLINFNNTFGTLNLVLLSLKQPALS-QSW-----SNHILWLAFMLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISILLDM-VNKTMAYPFIMLSLWGMVMTS--SICMRQTDLKSLIAYSSVSHMALVIVAVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERTHSRTMMLAQGLQTIFPLMGVWWMLGSLANLALPPSINLIGELLIITSSFSWSNLSILMMGTNMIMTAAYTFYMLITSQRGKLTNHTKFLPPTQTRESTIMSLHIIPIILISINPKLILGLP-------MNINVSM-NLLILTTLTTPLLLS---LTNKYNS-NSYPKHVVNS-IKLSFLFSLLPLLTFLSNNNELITSNWHWMTINSIKLAMSFKFDYFSYLFIPVALFVTWSITEFSSWYMHSDPNLNRFMKYLLMFLMTMIILVSANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLILSMAWFTIHTNSWELQQIFILTTN-TDILPLLGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLMTRFYPLTQNNQTILTLTLCLGAMTTLFTAMCALTQNDIKKIVAFSTSSQLG--LMFVTLGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPFTSSCLTIGSLALTGMPFLTGFYSKDLIIETLNTSNTNAWALLITLIATS-MTAVYSTRIIFFVVMSKPHFTPTITINENNPQLINPISRLALGSILAGFMITSNLPPTNIPTMTMPLPLKLMAITISILGFTIAMDLNNLTSTLT--HKSPTTTHKFTTLLGFFPSIIHRLLPIKSLTMSQNMASNLMDLIWLEKAIPKMIANTQMTASI--ITSNQKGLIKLYSLS---FLMNI--TIISLLTLT--------YYLE---- +>Tscherskia_triton_greater_long-tailed_hamster +----MNENLFASFITPT-LMGMPIVIIIIMLPAAIMTSSK-RLVNNRFHTFQQWLVKLIAKQMMMIHSSKGRTWSLMLVSLIMFIGSTNLLGLLPYTFTPTTQLSMNLGMAIPLWAGTVLLGFRHKMKSSLAHFLPQGTPIPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLMHLIGGATLALTI-ISPPTAIITFTILMLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTILASF-ITLFILTQLKISLHNFPN-NPSNK-HLKLLNS-LNP-W-ELKWTKIYLP-LS-LPQP----MFVNRWLFSTNHKDIGTLYLMFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGDIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDAWAKAHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLVMIFMIWEAFASKREVLAVEYPTTNLEWLHGCPPPYHTFEEPTFVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAVILVLIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTSDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKCFENWSVSMT----------MAHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHFNSSSLLLMGLLTNMLTMYQWWRDIVREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGIVPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRSGMNQALLITIILGAYFTALQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLTVCLLRQLNFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTILRKKHPLMKIINHAFIDLPAPSNISSWWNFGSLIGLCLIIQIFTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGIYYGSYTMIETWNVGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGPTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGLNSNADKIPFHPYYTIKDLLGVFLLLTVLMILVLFFPDVLGDPDNFTPANPLNTPEHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLATLPFLHLSKLRTMIFRPITQALYWALVADLLLLTWIGGQPVEYPFIIIGQVASIIYFAILIIFMPIASLIEDNML---KFT-------MH--------FINILMLLFPILVAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFVKEPLRPLATSTSLFIIAPTLSLTLAFSLWIPLPMPHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTLAIILLSVLLLSGSFSLQALIVAQEPMWLLFTCWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTIIFLGPFHDPLNPELYTTNFVLKTLLLTSVFLWIRASYPRFRYDQLMQLLWKNFLPLTLALCMWHISLPICTASI-P-PYT--MNP-FTLLIIYFTILSGPMVTMLSTNFFLMWIGLEMNLLAIIPLMVNKSNPR-STEAATKYFITQATASMIFLLSTILNYKQLGMW--TPQPQTSSLCTTLLLTSLAIKLGLSPFHTWLPEVTQGIPFNTALLLLTWQKLAPMSILFQIYEYLYPPILIIL-ALTSVLTGAWGGLNQTQTRKIMAYSSIAHMGWMISVLPYNPTLTITNLIIYIMLTLALFSILSPHSLSSIKTT---SLLWNKAPVTLPLTSLILLSMGGLPPLTGFLPKWLIITELLKNNNHILATTMAIAALINLFFYTRLIYSTTLTTFPTNNNSKMFS-HQTSSKKYLTL-------PTMAVLSTLTLPLSSLIV------MN-LIMALSTNITLSLILILVAFWLPQLNVYTEKAGPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQSPTLMLTLVISLLFLSTLALGLAYEWKQKG--LEWTE-MMTTVFNIILAFTFSLLGTLMFRSHLMSTLLCLEGMMLSLFIMTTITSLDSHSMIMYSIPIVILVFAACEAAVGLALLVKISNTYGTDYVQNLNLLQCMLKIMIPSMMLLPLTWLSPDKTVWVNVTTYSFMINIFAM-VTLWQINETGLCLS-SMFYTDPLSSPLTMLTIWLLPLMLIASQNHIKKDTSFNKKLYISMLVVLQILLIATFCANELIMFYILLEATLIPTLIIITRWGNQTERLNAGLYFLFDTLVGSIPLLIALISMQSTLGSLNILLLSLLASPLD-PTW-----SNHILWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRMAVILDP-MTKSMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAIMIQTPWSFMGASALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQTAFPLMALFWFLASLTNLALPPSINLVGELFITVSLFSWSSLSIILLGTNILITALYSLYMLITTQRGKITTHMSSLQPSQTRELTLMMLHISPLVLLTINPKLILGNTL------MNTITST-ISLIFLLLAFPVIMT---TTNTFKT-LDFPAHVTSL-IKLSFMLSLIPLCMLLHSNTELLITNWHWITINTVKLSINLKFDFFCIVFLPVALFVTWSIMEFSSWYMHSDPNLDRFIKYLLIFLITMIILTSANNMFQLFIGWEGVGIMSFLLIGWWYGRPDANTAALQAILYNRIGDIGFITTMAWLCLNNNSWEFQQILMM-DN-KSMIPILGLIIAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMISDNNFALTIMLCLGAVTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLKSLPFTSSCLTIGSLALMGMPFLTGFYSKDLIIEAANTCYTNAWALLITLLATS-LTAAYSLRIIFFVLMTKPRFPPLIIINENNPNLINPIKRLALGSIFAGFIISHSIPILSTQVMTMPWYLKMTAMMITIVGFSIALELNNLTNNLK--LYKPSSLSLFSTSLGYFTLTLHRLLPKKYLTMSFNTALATLDLTWFEKAIPKSTSIANSKMSQ--IMTNQKGLIKLYFLS---FLISL--LVIPTLLIS---------FPE---- +>Lipotes_vexillifer_Yangtze_River_dolphin +----MNQNLFTPFMTPF-MLGIPITTLIIMLPAMLFPSPN-RLTNNRLISIQQWLTKTVLKQLMNMHNPKGQSWSLMLISLLLFIASTNLLGMLPHSFTPTTQLSMNLGMAIPLWTGTVLMGLRHKTKTSLAHLLPQGTPTFLIPMLVVIETISLFIQPMALAVRLTANITAGHLLLHLIGSAILALAN-INTLAAFTTFIILTLLVILELAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSLTILFML-LTLFTLLQPKISKHSYFP-SPKST-YKKMNKQ-QNP-W-NKVWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQIYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSVIEAGTGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGASSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMISIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFAAKREVSTVTFTYTNLEWLNGCPPPYHTFEEPVYINP-KTS------MAYPLQLGLQDATSPVMEELLQFHDHTLMIVFLISSLVLYIIIMMLTTKLMHTNTMDAQEMETIWTVLPAMILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYENLTFDSYMIPTSDLKPGELRLLEVDNRMVLPMQTTIRMLISSEDVLHSWAIPSLGLKTDAVPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLESVPLENFEKWSASML----------MTHQTHSYHMVNPSPWPFTGAFSALLMTSGLIMWFHFNSMVLLILSLITITLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIVSEALFFTGFFWAFYHSSLAPTPELGGTWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGYRKQTLQALFITIALGLYFTLLQVSEYYEASFTISDGIYGSTFFVTTGFHGLHVIIGSIFLIVCFMRQMKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKILNKTFIDLPTPSNISSWWNFGSLLGLCLTVQILTGLFLAMHYTPDTSTAFSSITHICRDVNYGWMIRHLHANGASMFFICLYIHIGRGLYYGSYLFKKTWNIGVLLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSVDKATLTRFFALHFILPFIIVALTTVHLLFLHETGSNNPMGIPSNMDKIPFHPYHTIKDILGALLLMFVLLTLTLLAPDLLGDPDNYTPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILLFIPLLHTSKQRSMMFRPLSQLLFWLLMTDLLVLTWIGGQPVEHPYIIMGQLASILYFLLILVMMPTASFIENKIL---KW--------MF--------LINILMLILPVLLAVAFLTLVERKFLGYMQLRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFIIGPMLALTLALTMWAPLPMPHPLLNMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLFMNGSFTLSTLMITQEQLWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTAILFMGAFHNPHMPELHTTNLITKTLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI-P-PQM--MNP-FIYIIVLMTLILSTTIVTTSSHWLFAWIGLEMNTMAIIPIMMKNPSPR-ATEASTKYFLTQTTASALLMLAIIINLMYSGQW--TIMKVLNPTASTLMTTALAIKLGLSPFHFWVPEVTQGIPLSAGLILLTWQKLAPISILYQISPSVNLHLMLTM-SMLSILIGGWAGLNQTQLRKIMAYSSITHMGWMTTILPYNPTLTLLNLMIYIMMTFAMFMLLILNSTTTTLSL---TQTWNMMPTITILIMLMLLSMGGLPPLTGFMPKWMIIQELTKNDILTLPTLMTLTALLNLYFYMRLAYSTTLTLFPSINNMKMKW-QFYPTKRMTLL-------PTAIVLSTMLLPITPMLSILM---MN-FILTLLTNTTLAVLLMLIAFWLPQLNAYTEKMSPYECGFDPMKSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNLKTMLPTTLFLISLLAISLAYEWTQKG--LEWDE-MSLVHMNILLAFTMSLTGLLMYRSHLMSALLCLEGMMLSLFILMTITILNMHFTLASMTPIILLVFAACEAAVGLALLVKISNTYGTDHVQNLNLLQCMLKFIIPTITLMPLTWLSKNKFIWINTTAHSLLISFTSL-LLLNQFNDNSLNYS-LMFFSDPLSAPLLILTMWLLPLMLMASQFHLLKETPNRKKLYISMLIMLQTFLIMTFTAMELTLFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALMYLQNMLGSLNFLLLQYWTQPLS-SSW-----SNIFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILDP-LTEDMAYPFLTLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVITAILIQTPWSYMGATALMIAHGLSSSMLFCLANSNYERIHSRTMILARGLQIFLPLMATWWLLACLTNLALPPTINLIGELLVITSTFSWSNSTIILLGTNTVITALYSLYMLITTQHGKYTHHINNLYPSFTREHALMALHIIPLLLLSLNPKIIMGTPY------MNPFISS-ILLTLLMLTTPIMMS---FTNLYKT-DKYQHYVKNM-TLYAFIASLTPTMMFIHTNQEALISNWHWMTIQTLKLSLSFKMDYFSLMFMPVALFITWSIMEFSTWYMHSDPYINQFFKYLLIFLITMLILITANNIFQLFIGWEGVGIMSFLLINWWSARTDANTAALQAILYNRIGDIGLLVSMAWFLSNMNTWDLQQIFMLNQN-PSNTPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNEPILTMILSLGAITTLFAAICALTQNDIKKIIAFSTSSQLG--LMMMTVGLNQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLYKMLPFTTTALTIGCLALTGTPFLTGFYSKDLIIEAATSSYTNAWALLLMLTSTS-FTAIYSARIIFYTMLGQPRFPPFMNINELNTTSINPIKRLLIGSIFAGFILSQNIPPMTTPLMTMPLYLKLTALTMTALGFILALEINTYTQNLK--YPCPSNFTKFSTLLGYFPTIMHRLPTHLNLTTNQKLMTSLLDLAWTEIIMPKTMTSMQLKASI--LTSNQKGLIKSYFLS---FLISL--TLSMILF----------NYFE---- +>Meriones_unguiculatus_Mongolian_gerbil +----MNENLFASFITPT-MMGLPVFTLIIMLPSILFTSSN-RLINNRFHTFQEWLTKLIMKQMMTIHSPKGRTWSLMIISLIMFIGSTNLLGLLPHTFTPTTQLSTNLAMAIPLWAGAVITGFRHKPKSSLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATMALTS-ISTPTALITFIILTLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFMTMFSSI-ITLFILFQLKLSSQDFPH-PPMTK-TMKTLKT-KTP-W-EQKWTKTYLP-LS-LPLP----MFINRWLFSTNHKDIGTLYLIFGAWAGMAGTALSILIRMELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKMFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFIHWFPLLSGYTLNDTWAKIHFTIMFIGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNMVSSMGSFISLTAVLIMIFIIWEALASKREVVSIPHSTTNLEWLHGCPPPYHTFEEPTFVKV-K--------MAYPLQLGLQDASSPIMEELTNFHDHTLMIVFLISSLVLYLISLMLTTKLIHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMTPTNELKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGVFYGQCSEICGSNHSFMPIVLEMIPLKLFENWSVSMT----------MTHQTHAFHMVNPSPWPLTGALSALLLTSGLTMWFHYNSTILLLVGLATNILTMFQWWRDIIREGTFQGHHTPVVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNNMNQALLITISLGLYFTALQASEYLETPFSISDSIYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MMNLRKNHPLLKMVSHSFIDLPTPPNISSWWNFGSLLGICLTIQIATGLFLAMHYTADTTTAFSSVSHICRDVNYGWLIRYMHANGASMFFICLFIHIGRGIYYGSYTFTETWNFGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPTIVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVLVHLLFLHETGSNNPLGLNSDADKIPFHPYYTVKDFLGVVLLFFFFMLVVLFFPDTLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILIFLPLIHTSKQRSLMFRPISQMLYWALIANLLILTWIGGQPVEHPFIVIGQVASISYFMIILVFLPIAGFLENNLL---KW--------MH--------LINIMLFLVPILIAMAFLTLVERKILGYMQFRKGPNIVGPYGMFQPFADAMKLFTKEPLRPSSTSVSLFLIAPTLSLTLALSLWIPLPLPHPLINLNLGVLFILALSSFSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSTFLMSGSLSLQTLSITQEATWLVLPAWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNAISSIVFLGPLQNMDSPEIFTIDFMLKTVFLTMLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCTWYISMLIFMASI-P-PHA--MNM-YMMILIYFTLFFGPMITMTSSSLVLMWMGLEMSLLSITPLLVNKKNPR-STEAATKYFVTQATASMIFLLAIFTNYYQLGMW--TFQEQTSSLIIALTTISMAMKLGLAPFHSWLPEVTQGIPLQTGLIILTWQKFAPLSILFQTYELMNIKLTTMM-AISSVIMGAWGGLNQTQTRKILAYSSIAHMGWMIAILPYSPNLMILNFIIYIFLTFSMFIVFMMFSLTSINLT---SLMWNKIPTMMLILPTTLLSLGGLPPLTGFVPKWVIMTELLKNSSVLLTTLMAMTALLNLFFYMRLIYSTTLTIFPTNNISKMTY-HQTNLKTNTFL-------PTTTILGTFLLPLTPQLII-----MN-MLLSLLINIFLSTLLIIIAFFIPQINIYAEKVHAYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAVQSLSMHQMMLLSFSLLTILSLGLAYEWMQKS--LEWTE-MTPTMLNFTLAFTLALLGTLMFRSHLMSTLLCMEGMVLSLFIMISMLILNSNSMISFPTPIIILVFAACEAAVGLALLVKVSTMYGTDHVQNLNLLQCMLKIIFPSLMLIPLTWFSNKNFMWINISSYSFLISLVSL-TLLWQNNMVNATFS-PMFFSDPISTPLIILTTWLLPLMILASQHHLKKEKLNYKKLYLSMLISLQILLIMTFSATELIMFYILFEATLIPTLVIITRWGNQTERLNAGLYFLFYTLAGSIPLLIALILMQSQTGTLNFLILLLNNIPLN-PAQ-----SNSILWLACMMAFLIKMPLYGVHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRLAILLDP-TTKSLSYPFILLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVVASIMIQTPWSFMGAMALMIAHGLTSSLLFCLANTNYERTHSRTMTLARGLQTIFPLMASWWFLACLANLALPPSINLVGELMIMMSLFHWSNPSIILTGINMIITAMYSMYMLTMTQRGKTTNYIKHLQPSHTRELTLMTLHIMPLILLSINPKLIINFMT------MNISLSL-MFLILLILISPILIS---MTNIIKL-IDFPLYVTKS-MKYSFFLSLIPLTLFTYSNTEYMITTWNWVSINSTKLMISFKMDLFSILFMSVALYVTWSIMEFSSWYMHSDPQLNRFIKYLLLFLITMIILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAMLYNRIGDVGLIMTMTWLCLNTNSWELQHALSV-EN-SNTLPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTSSNNLMLTLMLCLGSLTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMATLGINQPFLAFLHICNHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGMMNALPFTTSCLTIGSLALIGMPFLTGFYSKDAIIESMNSSYINAWALLITLTATS-MTAMYSMRIIYFTMMTKPRFSPLITINENNPNLINPIKRLALGSIMAGFVVFFNLPPLNIPTLTLPWHIKMLALIITILGLITAFELNNFTSYFS--SIKPLKISTFSTLLGYFPTIFHRLTPMKFLNMSFYTATNLLDLIWLEKLIPKFISTCNTNASK--LTSNQKGLIKIYFLS---FLISL--TIFPILTLF---------------- +>Chrysochloris_asiatica_Cape_Golden_Mole +----MNENLFASFITPT-LMGLPIVLLIIAFPTIMFPSSK-RLIPNRLVSFQQWLISLILKQMMAMHNIKGRTWSLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRHKTKASLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLMS-ISMPTAIITFIILLLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTNTWFITIISAT-LTLFILFQINFSKLTFYL-EPEPK-LLKSTEH-KNP-W-ETKWTKIYLP-HS-SLPH----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNINTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLHSTWAKIHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMIFIVWEAFASKREVMTVELTTTNIEWINGCPPPYHTFEEPTYIKA----------MAYPFQMGFQDASSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTNTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYNDLSFDSYMIPTNDLNPGELRLLEVDNRVVLPMELSIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKHFENWSSTMT----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGTIMWFHYNSMILMTMGLVSMLLTMYQWWRDIIREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEIPLLNTSILLASGVTITWAHHSLMEGNRTQMIQALFITIALGVYFTLLQASEYYETPFTIADGVYGSTFFMATGFHGLHVIIGSTFLMVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTNIRKTHPLLKIINHSFIDLPAPSNISAWWNFGSLLGLCLIIQILTGLFLAMHYTSDTSTAFSSVTHICRDVNNGWLIRYLHANGASMFFICLFTHVGRGIYYGSYLFLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIVAALTMVHLLFLHETGSNNPSGLNSDADKIPFHPYYTVKDLLGVLMLLLFLLLLTLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILAAFPLLHMSHQRSLMFRPLSQCMFWILVADLFTLTWIGGQPVEHPFIIIGQLASILYFTIILVLMPVSSMIENRLL---KW--------MF--------LINLLSMIIPILLAVAFLTLIERKVLGYMQLRKGPNIVGPYGLLQPIADAMKLFTKEPLRPQTSSILMFILAPILALTLALTMWIPLPMPSSLINMNLSLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVSLAIILLSVMLLNGSFTLTSLIQTQEHIWLIFPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIILMNALTTTLFLGAYHSPLIPEAYTTNFMVKTMLLTISFLWVRASYPRFRYDQLMHLLWKNFLPLTLAMCMIYVSMPVMLASI-P-PQT--MNP-IIFITILLTLILGTVITMISSNWLMAWMGLEINMFAIIPLIIKQHNPR-SIEAATKYFLTQATASMILLLAALMNFMYSGQW--TIMNFTNSMPPFLALMALTMKLGMAPFHFWVPEVTQGSHLTSAAILLTWQKLAPLSILYQIFPSINHNLLLYS-GILSIILGGWGGLNQTQLRKILAYSSIAHMGWMAIIISYEPSLMLLNLIIYILMTLSSFMLLIGNSNTSTASL---AIMSNKTPLTMIMLMGVLLSLGGLPPLSGFMPKWLIIQEMTKNNSIILPLIMAMLALLNLYFYMRLIYSSALTMFPSNNNMKMKW-KYTNLSYSTLL-------PTMFTLSMLSLPLTPMMNLLL--MIN-LMITLFINSSIAMLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQAGNLKLMLTMALILITLLALGLAYEWVQKG--LEWIE-MSPILINMLLAFTISLIGLLIYRSHMMSSLLCLEGMMLSLFILTSTLALTMHFTLMTMMPIILLVFAACEAAIGLSLLVMVSNTYGLDYVQNLNLLQCMLKIIIPTMMLLPLTWYSKKSMIWINVTSYSFMINLAAL-PLLNQTMDMTLNTS-LLFSSDSLSTPLLILTTWLLPLMLMASQFHLNTESELRKKTYISMLITLQIFLIMTFTASELIMFYILFEATLIPTLILITRWGNQTERLNAGLYFLFYTLAGSLPLLVALTYLQNNLGSLNILLIQFITQPMS-PSI-----SSNFLWLACMLAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITILIDP-LNYSMAFPFLMLSLWGMVMTS--LICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWGFMGATTLMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQSIIPLMALWWFTASLMNLALPPSINFIGELFITLSMFSWSKLSLLLMGLNMLITALYSLYMLITTQRGKPSFHINSIKPTFTREHTLMTLHILPLILLSVNPKLILGTMY------MNLTPTF-TLMVFIILIIPIIMS---TTHIYQT-KLYPQYIKTA-ISYAFTISMIPALTFINSNQEIMISNWHWITINSMKITLSFKLDYFSLIFIPVALFVTWSIMEFSIWYMEMDPNINRFFKYLLTFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYARTDANTAALQAILYNRIGDIGFILTMAWFLIHSNSWDLQQIMMTSTE-TNTLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHSLLENNKTILTLMLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGAIIHSLNDEQDIRKMGGLYKPLPLTSSALIIGSLALTGTPFLTGFYSKDLIIEAANTSYINAWALSLTLIATS-MTAIYSSRIIFYALMGQPRSTTLILINENNPSLINAIKRLMFGSIFAGFILSNSINPTTIPQMTMPIYLKLTALSVTLLGFMLAMELNQMTLYLK--FNYPSNTFKFSNMLGFYPQIMHRLYPFHSLNISQNISSNIIDLTWLEKTMPKNLANYNLMAAT--MTSNQKGMIKFYFMS---FLISL--CLALTFLL----------------- +>Orcaella_heinsohni_Australian_snubfin_dolphin +----MNENLFASFMIPI-VLGFPITTLIIMLPTMLFPTPN-RLTNNRMITIQQWLIKLTSKQLMATHNPKGQTWSLMLISLFLFISSTNLLGMLPYSFTPTTQLSMNLGMAIPLWAGTVLIGFRNKTKMSLAHLLPLGTPTFLIPMLVMIETISLFIQPLALAVRLTANITAGHLLLHLIGSTTLALMN-INLFTALITFIILTLLAILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWFLTILSMT-LALFMLLQLKISKHFYSP-SPKPV-DTKLQKQ-QTP-W-NHTWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQLYNVLVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWTKIQFMIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFEEPVYVNL-KHS------MAYPFQLGLQDAASPVMEELLQFHDHTLMIVFLISTLVLYIITLMLTTKLTHTNTMDAQEVETIWTVLPALILITIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRMVLPMQMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVSLENFEKWSTSML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSMILLILSFFTNFLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALLITIMLGLYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKILNNAFIDLPTPSSISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWFIRYLHANGASMFFICLYAHIGRGLYYGSYMFQETWNIGVLLLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVTVHLLFLHETGSNNPTGIPSNMDMIPFHPYHTFKDILGALLLILVLLMLTLFTPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILIFIPMLQTSKQRSMMFRPFSQLLFWTLIADLLTLTWIGGQPVEHPYIIVGQLASILYFLLILVLMPTVSLIENKLL---KW--------MF--------MINILTLTLPILLAVAFLTLVERKILGYMQFRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFMIAPVLALTLALTMWAPLPMPHPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLNTTQEKLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGAFHDPHMPELCTTNLIVKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHTSLPIMTASI-P-PQT--MNP-FISITLLTTLILSTAIVTISSHWLFAWIGLEMNMMAIIPIMMKKHNPR-ATEASTKYFLTQATASSLLMLAIIINLMYSSQW--TIMKLFNPTASILMTMALAIKLGLSPFHFWVPEVTQGIPLSTGLILLTWQKLAPISILYQISPSINLHLMITM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMSAILLYNPTLTLLNLSIYIVMTFTMFMLLIQNSTTTTLLL---SQTWNTTPIMTTFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFYPTKQMTLL-------PTAIVLSTMLLPLTPTLFALL---MN-LLLTLLTNTTLALLLMLIAFWLPQLNIYMEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLMTMLPTALSLISLLAVSLAYEWTQKG--LEWDK-MSLIHTNILIAFTTSLTGLLMYRSHLMSALLCLEGMTLSLFILATLTILNTHFTLAIMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKSNFIWINTTTHSLLISFTSL-LLLNQFNDNSLNYS-LTFFSDPLSTPLLMLTMWLLPLMLMASQSHLLKESLARKKLYITMLIMLQTLLIMTFTAMELIMFYITFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALTYLQNTVGSLNFLLLQYWAQPLS-TSW-----SNTFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTEHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFFPLMTTWWLLACLTNLALPPTINLVGELLVIMSTFSWSNLTIILMGANIVITALYSLYMLIMTQHGKHTHHINNLTPISTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFISS-TLLTLLMLIAPVMVS---NTDFYKN-NKYQHYVKNM-TLSAFITSLIPMMMFIHTNQEMLISNWHWITIHTFKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLHNTNAWDLQQIFMLNQN-PPILPLMGLTLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLIQTTMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALIIGCFALTGMPFLTGFYSKDPIIEAATSSYTNAWALLLTLIATS-MTAIYSARIIFFTLLEQPRFPPLMNINETNPMLINPIKRLLIGSILAGFILSNSMPPMNTPLMTMPLYLKLTALMVTILGFILAFEINTYSKNLK--YPYSSDSIKFSTLLGYFPTIMHRLPP-LFLTMSQKFATSLLDLAWTELILPKTMALIQLKAST--LTSNQKGLIKLYFLS---FLITM--TLSMLLF----------NCPE---- +>Capreolus_capreolus_Western_roe_deer +----MNENLFASFIVPM-VLGLPLATLIIIFPSLLFPASN-RLISNRLISLQQWVLQLVSKQMMGIHNTKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVIMGFRNKTKASLAHFLPQGTPTPLIPMLIIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISTTMAFITFIILVLLTVLEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LVLFIIFQLKISKHNFYF-NPESK-LAKTQKQ-STP-W-ETKWTKIYLP-LL-LSQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFMIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKFFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFSSTILLXLGLTTNMLTMYQWWRDIIPESTFQGHHTPTVQKVLRYGMILFIISEVLFFTGLFWAFYHSSLAPTPKLGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHCLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFKSAAWYWHFXDVPWLFLYDVIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSNADKIPFHPYYTIKDILGILFLILSLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALISSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIAIGQIASIMYFLIILVLMPITSTIENNLL---KW--------MF--------TINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFMSSI-P-PQT--MNP-IIFIIILLTMMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMSKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSMNLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLVIYIIMTSTMFTLFMANSTTTTLSL---SHTWNNMPVMTVLVLITLMSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTLMAITALLNLYFYMRLSYSTALTMFPSTNNMKMKW-QFSTTKQMMFL-------PTMVTLSTMLLPLTPILSVLE---MN-LVLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDNLNTMLIMALFLIFLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFTVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYVMPTMMLMPLTWLSKSTMIWINSTIHSLVISLTSL-LLMNQFNDNSLNFS-LLFFSDALSMPLLILTMWLLPMMLMASQHHMSKENLARKKLYISTLILLQLFLIMTFTATELILFYIMFEATLLPTLIIITRWGNQTERLNAGLYFLFYTLVGSIPLLITLVYFQNINGTLNFLVFQYLVQPLC-NSW-----SSVFFWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRVSTLLNP-ITEFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-TLITLFLLIIPIMTT---SSENYKT-SNYPLYVKTT-ISCAFITSMIPTMMFIHTGQEMVISNWHWLTIQTMKLSMSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFILAMAWFLMNLNAWDFQQIFMLNPD-NSSLPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKFMQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIETTNTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFTTLVTINENNPFLMNSIKRLMIGSLFAGFIISNSIPPTTIPQMTMPSYLKMTALAVTVLGFILALEISNMTQNLK--FNYPSNTFKFSNMLGYFPTIMHRLAPYMNLMMSQKSASSLLDLIWLENILPKTTSLIQMKMSI--MITNQKGLIKLYFLS---FLVTI--IISIVLF----------NFHE---- +>Spalacopus_cyanus_coruro +----MNENLFSSFITPT-MLSMPIVILIIMFPAMLFPNPK-RLINNRVIALQQCLVKLILKQMMSMHSTKGRTWSLMLISLILFIGTTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVILGFRHKTKMSLAHFLPQGTPIPLIPMLIVIETISLFIQPMALAIRLTANITAGHLLMHLIGGATSALLT-ISPPAALMTFIILLLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITILSMI-ITLFTMFQIKTSMHSFYT-NPQQL-YLKTTKQ-KTP-W-EKKWTKIYSP-LL-SHRQY---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRSELGQPGSLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNPTWAKIHFFIMFTGVNITFFPQHFLGLSGMPRRYSDYPDAYTFWNTVSSMGSFISLTAVMVMIFMIWEAFASKREVTTTELTSVNLEWLHGCPPPYHTFEEPTYIKT-LWQE-----MAYPYELGFQDATSPIMEELLYFHDHTLMIVFLISTLVLYLISLMLTTKLTHTNTMDAQEIETIWTILPAIILIMIALPSLRILYMMDEINSPTLTVKTMGHQWYWSYEYTDYEELTFDSYMIPTTDLKPGELRLLEVDNRVILPMEMSVRMLISSEDVLHSWAIPSLGLKTDAIPGRLNQTILMSSRSGLFYGQCSEICGSNHSFMPIVMEMVPLKTFENWCSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGMIMWLHFNSTILLSLSMLTNLMTMYQWWRDVVREGTYQGHHTSTVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGYWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKQMIQALAITIILGAYFTLLQVSEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLMTCLLRQLYFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSLIDLPAPSNISTWWNFGSLLGVCLMLQIVTGLFLAMHYTADTSTAFSSVTHICRDVNYGWLIRYLHANGASMFFILIYLHIGRGIYYGSFTLMETWNIGVVLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPNLVEWIWGGFSVDKATLTRFFAFHFILPFIITAMVMIHLLFLHETGSNNPSGLDSDSDKIPFHPYYTIKDTLGFMFMALTLTTLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILMLFPMLHLSKQRSMSFRPLSQCLLWILAANLTILTWIGGQPVEHPFIMIGQLASVIYFFIILILMPTTSLMENKLL---KW--------MY--------MINFLLLIIPILLAMAFLTLMERKMLAHMQLRKGPNIVGPYGILQPMADALKLFIKEPLHPSTSSILLFTITPSLALTLALSMWIPMPMPHPLINMNLGALFILATSSLAVYSILWSGWASNSKYALFGALRAVAQTISYEVTLAIILLSVLILNGSFTLPTLMTTQKNIWLILPTWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNILMMNALTTIIFLNSMPSTTAPEIYSMKLMTKTLILTALFLWIRATYPRFRYDQLMHLLWKNFLPLTLALCMWHISMPIFMCSI-P-PQSM-MNI-MLTTIIYTTLIMGTLITLISSHWLLMWIGLEMNMLAMIPILMNKSNPR-STEPATKYFLTQATASMILLLSIILTMMYSGQW--SIFYSNNTVISLILTTSLIMKLGLAPFHFWVTEVTQGTSLLTGMVLLTWQKIAPLSILLQNFSTINQPLILIS-AILSTLLGGWGGLNQTQLRKILAYSSIAHMGWMMVILHYNPSVSLLNLVIYIMLTTSMFSILHTNNNSTTLTL---SHMWNTSPPTTIIILMNLMSLGGLPPLTGFAPKWIIIQEMIKNNNITIPTIMAMMALINLYFYMRLTYSTTLTLFPSTNNTKFKW-HFYNNKKTIML-------SPLITLSTMLLPTLPLLMILN---MN-IIISLITNYTLTMILITIAFWLPQLNIYTEKASPYECGFDPTGITRLPFSMKFFLIAITFLLFDLEIAILLPLPWALQTPSLNLTMWASTCLISILSLGLTYEWLQKG--LEWAE-MTSMLFNITTAFTISFMGIMVYRSHMMSSLLCLEGMMLSMFILGVVIMLNSHYILAFSPPVILLVLAACEAAVGLALLVMISNTYGIDYVQNFNLLQCMLKIIMPTIMLIPTIWLSKPSSMWINTTSYSMLITLISL-SYLNNMDVTNMNYS-LTLSSDSLSSPLLILTTWLLPLMIIASQHHLKNETDTRKKTYISLLISLQASLIMTFSVTEMILFYILFETTLIPTLIIITRWGNQTERMSAGLYFLFYTLIGSLPLLVTLIYLQNQMGTLNFLLFHYYKPTLD-PTW-----SNNLVWLACTTAFMIKLPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGLMRILQLLEP-LTNNMAYPFLLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQSPWSFMGATSLMIAHGLTSSLLFCLSNSNYERVHSRTLLLTRGLQMLFPLMGMWWIIASLTNLALPPSINLFGELLIVMSTFSWCNLTIILTGLNTLITALYSLYMLISTQRGKLPYHIHNMPPTFTRENILMSLHIIPLLLLTFNPKIILGNLY------MNLFNSS-FIMALTILMLPMITP---LTNLHKN-PYYPNYIKTI-ISTSFFLSLIPTLIMFYSDQEATMCNWNWLNIQTFHLSINIKLDYFSILFMSVALFVTWSIMEFSLWYMHSDPNMNKFFKYLLLFLITMMILVTANNLFQLFMSWEGVGIMSFLLMRWWYGRSDANTAAMQAVLYNRIGDIGFILSMTWFLLYSNSWDLQQIFITQEN-TNIIPMLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMQNNQMLQTLCLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLNKTLPITSSSLMIGSMALTGIPFLTGFYSKDLIIESATTSYTNAWALIITLAATS-LTAVYSMRIIFFALLNNPRFNFSPNMNENNPTMINPIKRLAIGSILAGFYMSYNIPITNTPQMTMPLYMKLTAVLLTVLGFTIALELNTMTNNLK--SNYSTDLANFSNMLGYFPLLMHRASPYFNLSASQNLASSMIDLTWLEKSLPKSIAQTQATASM--YTSTQKGFLKLYFLS---FLTSV--TLSLTLLF----------------- +>Callithrix_pygmaea_pygmy_marmoset +----MNQNLFASFDIPM-ILGVPLVILIIMFPATLITPNN-NLINNRYSSLQQWLIQLVLKQMMISHSTKGRTWSLMLTALITFIALNNLLGLTPYAFTPTTQLSMNLGMAIPLWAATVLMGLRFKTKSTLAHFLPQGTPVPLIPMLIIIETISLFIQPVALAVRLTANITAGHLLMHLLGDTTLTLMS-IYLSSSTITIIIIILLITLELGVALIQAYVFTLLVSLYLHDNSMPQLNISPWPMVILSMI-VTLFYIIQLKVLNFTFHT-TPSLK-LTKTQKH-KTT-W-ELKWTKIYSP-PS-TSR-----MFMNRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRAELGQPGSLMEDDHVYNVIVTSHAFIMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKVHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIISSVGSFISLTAVILMIFMIWEAFSSKRKVSTIEQLSTNLEWLHGCPPPYHTFEEATYVKALNEKG-----MAAPAQLGLQNAASPIMEELIAFHDHALMIIFLISSLVLYVISLMLTTKLTHTSTMNAQEIEMIWTILPAMILIMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYEDLAFDSYIMPTYFLEPGEFRLLEVDNRTTLPMEADIRVLISSQDVLHSWAVPSLGVKTDAIPGRLNQAMVASMRPGLYYGQCSEICGSNHSFMPIVLEFIYFQDFEVWASYLYIV--------MTHQTHAYHMVNPSPWPLTGALSAFLLTSGMIMWFHFYYMPLLAAGLLASTMTMFQWWRDIVREGTYQGHHTSPVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPQTGGHWPPTGIFPLNPMEVPLLNTAVLLASGVTITWAHHSLMEANRKESAQSLSMTIALGIYFTYLQMSEYSETSFTISDGIYGSTFFMATGFHGLHVIIGTTFLITCYFRQQLFHFTSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MIPPRKTHPLAKIMNESFIDLPTPSNISSWWNFGSLLGTCLIIQITTGLLLAMHYTPDTATAFSSVAHITRDVNYGWMIRYLHANGASMFFICLFLHIGRGLYYGSFLFLKTWNIGTILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFTFHFILPFIIAALATIHLLFLHETGSSNPSGITSEPDKIPFHPYYTTKDILGLTFLLLMLTSLTLFTPDLLTDPDNYTLANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAMSILILMFVPMTHLSKQQSMAFRPITQVMFWTLVADLFTLTWIGGQPVEHPFIAIGQTASIMYFLIIITLIPLSSLIENKLL---KW--------MF--------MINLILLIVPALIAMAFLTLTERKVLGYMQFRKGPNIVGPYGMLQPIADAMKLFTKEPLLPTTSTTTLYLTAPTLALSIALLLWTPLPMPYPLMNLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLQSLITTQEHYWLLLPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFLAASFNMAMPEMYTINFMTKTLLLTTLFLWIRTAYPRFRYDQLMYLLWKNFLPLTLALCMWYISMPILMSGI-P-PQT--MNP-LAHLIISLTILTGTTITILSSHWFLAWMGLELNMLAIVPILAKSTNPR-STEASTKYFLIQATASMILLMTIFLNNLTSGQW--TINPPHNQTLSTMMLIALMMKMGMAPLHFWLPEVTQGIPLIPAMIVLTWQKLAPLSIMFQIFPSMNTNIILMV-SILSIMAGSWGGLNQTQLRKILAYSSITHMGWMVAVLHYNPNITILTLIIYIFLTISTFMIFYLNSNMTTLSL---SHTWNKLTWMMPMIPLMMMSLGGLPPLTGFSPKWAIMQELTKNNSLIIPLTMAMLTLMNLYFYMRLTYSISMTMFPTSNNTKINW-QLKHVKPMPLL-------PPLMAFSTLLLPLTPLMLTN----MN-LALTLTTTILLALLLITITFWLPQLNTYTEKHNPYECGFDPTTSAHLPFSMKFFLIAITFLLFDLEIALLLPLPWATQTNNLTLTINMIFTLLVILALGLAYEWSQKG--LDWVE-MPFIYINITLAYFMSLLGLLIYRSHLMSSLLCLEGMMLSLFIMTTLTTLNMHSMLMYMMPIALLVFAACEAAVGLALLILISNLYGLDYVQNLNLLQCMLKIILPTIMMLPTMCFSKTYMMWINTMTCSLLISIFTL-MVLYAPN-NSCNLS-LTFFSDPLTSPLLMLTAWLLPLMILATQQHLLNNPIPRKKLYISMLVLLQISLIMTFSATELILFYILFETTLIPTLIIITRWGYQPERLNAGSYFLFYTLAGSLPLLITLLYYSSSLGSLNIITMTINTKEIM-LSW-----TNNIMWLGCIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRIIPMLNP-LTEKMSYPFIILSLWGMVMTS--SICLRQADLKSLIAYSSVSHMALVILAILIQTPWSLTGAMILMIAHGLTSSLLFCLANSNYERIHSRTMMFTRGLQALFPLLALWWLLANLTNLALPPTINLMGELLTILASFSWSNFTIMFTGFNMLITALYSLHMFTSTQRGPLTYSTSNVKPLFTRENTLMLMHMAPILLLTLNPKTIMCLTP--------MHSSM-ILMTIIPLLAPIMIT---LINPNKN-LLYPYYVKLS-IIYAFTTSMLSMTMYIFTGQESMISNWHWMTIQTIELSLNFKMDFFSVMFTPVALFVTWSIVEFSMWYMDSDPNINQFLKYLLIFLVTMLILITANNLLQLFIGWEGMGIMSFLLISWWHGRTDANTAALQAILYNRIGDIGFILAMTWFFLHSNSWDLQQMFILNPT-PNSFPLMSLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLIIRFYPMMENNPFIQTLALSMGAITTLFTAICALTQNDLKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLSAGSIIHSLSNEQDIRKMGGLFKTLPFTSSSLIIGSFALMGMPFLTGFYSKDLIIETANTSYTNAWALTTTLVATS-LTAMYSIRIIFFALTGYPRFTTLILINENNPKLMNPINRLAVGSIFAGFLISNCVPPTSHPQVTMPWYLKLMALSVTILGLLVAMELSLMTNNMK--LSTPLKTFYFSNMLGFYSTTTHRLNPHSSLTTSQNLTSTLLDLFWLEKSMPKMTTQTQISMST--TSSTQKGLIKLYFLS---FLIPP--MLALLLMI----------------- +>Leggadina_lakedownensis_Lakeland_Downs_mouse +----MNENLFTSFMTPT-VMGLPIVITIIMFPSILFPSSE-RLINNRLHSFQHWLIKLIIKQMMLIHTPKGRTWALMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVILGFRHKLKNSLAHFLPQGTPMSLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLMN-ISPPTATITFIILLLLTMLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTIVSSM-ITLFILFQLKISSQTFPM-SPSPK-LLSTTST-KTP-W-ELKWTKIYLP-LS---------MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLNDTWAKAHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLVMIFMIWEAFASKREVLYVSYTSTNLEWIHGCPPPYHTFEEPSYVKT-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAAILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNELKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAFSALFLTSGLVMWFHYNSTIMLTMGLLTNMLTMYQWWRDVIREGTFQGHHTPTVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTHDLGSCWPPMGISPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITILLGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSSFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLIKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLMRYMHANGASMFFVCLFMHVGRGVYYGSYTFTETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTVKDLLGVFILILTFMTLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILALMPLLHTSKQRSLIFRPITQMLYWVLAANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIEDKML---KWNL------MH--------FINILTLLLPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPTLSLSLALSLWIPLPMPHPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQMLMTTQEKIWLIIPTWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTTIVFLGPLYNMHAPELYSINFMVETLLLSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHVSLPIFMASI-P-PYI--MNP-ITLIIIYFTIFMGPVITMSSTNLLLMWVGLEMNLLAIIPLLINKKNPR-STEAATKYFITQATASMILLLAIILNYKQLGSW--MFQQQTNNLLLNITLISLSMKLGLAPFHYWLPEVTQGIPLHTGLIILTWQKIAPLSILTQIHQLLNPSIVLTL-AILSIFIGAWGGLNQTQTRKIMAFSSITHMGWMIAILPYNPTITLLNLTIYIMMTVPMFITLMINNSTSINSI---SLLWNKTPVMMIIIPPILMSLGGLPPLTGFLPKWVTITELLKNNCPILTTTMAIMALLNLFFYTRLIYSTSMTMFPTNNNSKMLS-HMAHPKYNPTL-------PLMTIISTLTLPLSPQLIM-----MN-LFTVILINSLLSFTLISIAFWLPQMNVYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTTDINIMMYSAFILVTILSLGLAYEWSQKG--LEWTE-MTTTLLNLTLAFSFSLMGTLMFRSHLMSTLLCLEGMMLSLFIMISMSTLNSNSMASFPIPITILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIIFPSLMLIPLTWLSKTKKFWTNVTTYSFLISLISL-ILLWH-NDNNQNHS-ISFSSDPLSTPLIILTTWLLPLMLMASQNHLKKEKFVYQKLYVSMLISLQILLILTFSVTELILFYILFEATLIPTLVIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALISIQNSTGTLNFLILSLTTTHIN-NTW-----SNNILWLSCMMAFLIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRVAIILDP-LTNHMCYPFMLLSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSFMGATMLMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMAMMWLLGSLANLALPPSINLIGELFITMSLFSWCNISIILIGLNIVITALYSMYMIIMTQRGKLTSHMNNLQPSHTRELALMTLHVIPLILLTINPKLIMGLSA------MNTISSS-ILMIFIMLTFPVLLS---MTNLIKP-TKFPSLAILS-IKFSFILSLLPLLLFLQSNTEYMVTNWHWMTMNSIKISMSFKIDYFSLLFLSVALYVTWSIMQFSSWYMHSDININRFMKYLILFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGLILAMTWFCLNSNSWELQQILLT-NN-NSLIPLMGLLIAAMGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFHPLTSNNSSILTMMLCLGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGNMMKTLPITSSCLTIGSLALTGMPFLTGFYSKDSIIESINTCNTNAWALLITLIATS-MTAMYSMRIIYFAVMTKPRFPPVIIINENNPNIINPIKRLALGSIMGGFIISLNIPPTNLQILTMPPYLKTMALLISILGFTVSLELNNLTLKFS--LPKNNPRTSFSTSLGYFPSIMHRIIPLSTLNTSLKLSSSTLDSIWLEKAIPKSISTMHMNMSK--MTTNQKGLVKLYFMS---FLISI--LLIISLYII---------NPE---- +>Callimico_goeldii_Goeldis_marmoset +----MNQNLFASFNIPT-ILGIPLVMLIIMFPTILLTPSK-NLIKNRLSSLQQWLIQLTLKQMMTTHTTKGRTWSLMLLALITFIALNNILGLTPYAFTPTTQLSMNLGMAVPLWMATVLLGLRHKTKSSLAHFLPQGTPAPLIPMLIVIETISLFIQPVALAVRLTANITAGHLLMHLLGDTTLTLMS-IYPASSTITTIIIVLLVTLELGVALIQAYVFTLLVSLYLHDNSMPQLNISPWPMVILSMV-VTLFYITQLKMLGFTFHM-MLSPK-LTEMQKH-KTT-W-ELKWTKIYLP-PL-TFPQS---MFMNRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRTELGQPGSLMEDDHVYNVIVTSHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGASVDLAIFSLHLAGVSSILGAINFITTIVNMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSVGSFISLTAVILMIFMIWEAFSSKRKVSTIEQLSTNLEWLYGCPPPYHTFEEATYVKTLSEKG-----MATPAQLGLQNATSPIMEELIAFHDHALMIIFLISSLVLYIISLMLTTKLTHTSTMNAQEIEMIWTILPAVILIMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYEDLAFDSYITPTYFLEPGEFRLLEVDNRTTLPMEADIRVLISSQDVLHSWAVPALGVKTDAIPGRLNQAMLTSTRPGLYYGQCSEICGSNHSFMPIVLEFIYFQDFEVWASYLYIV--------MTHQTHAYHMVNPSPWPLTGALSAFLLTSGLIMWFHFHFTPLLIAGLLASTMTMFQWWRDVVREGTYQGHHTTPVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPQTGGYWPPTGIFPLNPMEVPLLNTAVLLASGVTITWAHHSLMEANRKESAQALLMTIMLGIYFTCLQMSEYSETSFTISDGVYGSTFFMATGFHGLHVIIGTTFLITCYFRQQLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTSPRKTHPLAKIINESFIDLPTPSNISSWWNFGSLLGTCLIIQITTGLFLAMHYTPDTSTAFSSVAHITRDVNYGWMIRYLHANGASMFFICLFLHIGRGLYYGSFLFLKTWNIGTILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFTFHFILPFIIAALAAIHLLFLHETGSSNPSGMTSEPDKISFHPYYTTKDILGLIFLILFLMNLTLFTPDLLTDPDNYTLANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALMLSILILTIIPTMHLSKQQSMTFRPITQILFWALVADLLTLTWIGGQPVEYPFITIGQTASIMYFLIIITLIPLSALIENKLL---KW--------MF--------MINLLLLIVPALIAMAFLTLTERKILGYMQFRKGPNIVGPYGVLQPIADAMKLFTKEPLLPTTSTTTLYLTAPTLALSIALLLWTPLPMPYPLINLNLGLLFILATSSLAVYSILWSGWASNSNYALIGSLRAVAQTISYEVTLAIILLSTLLMSGSFNLQTLITTQEHYWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFLATPYKMTTSEIYTINFMTKTLLLTTLFLWIRTAYPRFRYDQLMYLLWKNFLPLTLALCMWYISMPVLTSGI-P-PQT--MNP-LAYLIISFTILTGTMITTLSSHWFLAWMGLELNMLAIVPILAKNTNPR-STEASTKYFLIQATASMILLMAIFLNNLISGQW--TINPPDNQISSMMMLIALVMKMGMAPLHFWLPEVTQGTPLIPAMVILTWQKIAPMSIMLQIFPSMNTTIILTI-SILSIMIGSWGGLNQTQLRKILAYSSITHMGWMTTVLYYNPNITILTLIIYIFLTTSTFMIFFLNSNVTTLSL---SHTWNKLTWVMPIIPLMMMSLGGLPPLTGFSPKWAIMQELTKNNNLIIPLTMAMLTLMNLYFYMRLTYSISMTMFPTSNNTKINW-QLKHMKPTPLL-------PPLMMLSTSLLPLTPLMLVI----MN-LALTLTTNTLLALLLITITFWLPQLNAYTEKHNPYECGFDPTTSAHLPFSMKFFLIAITFLLFDLEIALLLPLPWATQTNNLMLTINMILALLIILALGLAYEWTQKG--LDWVE-MPFIFINVMLAYFMSLLGLLIYRSHLMSSLLCLEGMMLSLFIMATLTTLNMHLMLMCMMPIILLVFAACEAAVGLALLILISNLYGLDYVQNLNLLQCMLKIILPTMMMLPMMWLSKNYTMWINTMTSSLLISILTL-LMLYSPN-NSCNLS-LTFFSDPLTSPLLMLTAWLLPLMILATQQHLYSSPIPRKKLYMSMLIFLQISLIMTFSATELILFYILFETTLIPTLIIITRWGYQPERLNAGSYFLFYTLAGSLPLLITLLYYLNNLGSLNMLTTTMNTKEML-LSW-----TNNIMWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITPILNP-LTEKMNYPFIILSLWGMVMTS--SICLRQADLKSLIAYSSVSHMALVILAILIQTPWSLTGAMVLMIAHGLTSSLLFCLANSNYERIHSRTMMFTRGLQALFPLLTLWWLLANLANLALPPTINLMGELLTILASFSWSNFTIMFTGFNMLITALYSLHMFTSTQRGPLTYSTSNVKPLFTRENTLMLMHMVPIILLTLNPKVMMNFTP--------MHSPM-ILMTIIPLLAPITIT---LINPNKN-SQYPQYVKLA-IIYAFIVSTMSMMMFIFTGQESTISNWHWITIQTIKLSLSFKMDFFSTMFTPVALFVTWSIVEFSMWYMSSDPNINQFLKYLLIFLVTMLILITANNLFQLFIGWEGMGIMSFLLISWWYGRTDANTAALQAILYNRIGDIGFIMAMTWFFLYSNSWDFQQMFILDST-MNLFPLMSLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLIIRFHPLIENSPLIQTLILSMGAITTLFTAICALTQNDLKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLSAGSIIHSLNNEQDIRKMGGLFKTLPFTSSSLIIGSFALTGMPFLTGFYSKDLIIETANTSYTNAWALTTTLVATS-LTAMYSIRIIFFTLTGHPRFTTLILINENNHMLMNPINRLAVGSIFAGFLISNCIPPTSYPQVTMPYYLKLTALSVTMLGFIVAMELSFITNNMK--LSTPLKTFYFSNMLGFYSTTTHRLNPHSSLTISQNFTSVLLDLFWLEKSMPKLTTQTQIPIST--TSSIQKGLIKLYFLS---FFIPP--TLALLLTI----------------- +>Taurotragus_derbianus_giant_eland +----MNENLFASFITPM-ILGLPLVTIIVLFPSLLFPTSN-RLVNNRLISLQQWALQLVSKQMMAIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRSKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTAFITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMIMSMF-LTLFIIFQLKISKHNLYH-NPEPT-TTKVSKQ-NTP-W-EMKWTKTYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPVYVNL-K--------MAYPMQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTPELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSTILLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIRPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGHRYHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG---MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGMYYGSYTFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDTLGALLLILTLMLLVLFAPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLMLMPLLHTSKQRSMMFRPLSQCLFWILAADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPVTSMIENNFL---KW--------MF--------MINILMFIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSTSMFILAPILALGLALTMWIPLPMPYPLVNMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPILLASI-P-PQT--MNP-IIFIIILLTIMLGTIIVMISSHWLFIWIGFEMNMLAIIPIMMKTHTPR-ATEASTKYFLTQSTASMLLMMAIVINLMFSGQW--TVMKLFNPVASMIMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLDLILTL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLTIYIIMTSTMFMLFMANSTTTTLSL---AHTWNKTPVMTVLVLVTLLSMGGLPPLSGFIPKWMIIQEMTKNDSVILPTLMAITALLNLYFYMRLAYTTALTMFPSTNNMKMKW-QFSTTKRMTLL-------PTMIVLSTMMLPLTPMLLILE---MN-LMLALLTNFSLATLLVIIAFWLPQLNLYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAASLAYEWTQKG--LEWTE-MSLVYMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMAALTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTTMLMPLTWLSKNNMIWINPTMYSLLISFTSL-LLMNQFGDNSLNFS-PMFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLILLQLFLIMTFTAMELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALLYIQKTVGTLNFLVLQYWVQPVP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-TTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVVSTFSWSNMTIILMGTNMVITALYSLYMLIMTQRGKHTYHINNISPSFTRENALMSLHIIPLLLLSLNPKIILGPLY------MNMFSSF-TLITLLLLTMPVMMT---SSNIYKT-LNYPLYVKTT-ISYAFFTSTIPMMMFIHTGQEAVISNWHWLTIQTLKLSLSFKMDYFSVMFIPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDLQQIFTLNPD-NSNMPLLGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGVPFLTGFYSKDLIIETANTSYTNAWALLLTLIATS-FTAIYSTRIIFFALLGQPRFPTLVIINENNPLLINSIKRLLIGSLFAGFIISNSMPPMTVPQMTMPFHLKTTALMITILGFILALEISSMTQNLK--LYHPSNSFKFSNMLGYFPTIMHRLIPYANLTMSQKSASSLLDLIWLENILPKTISLIQMKMSI--MVTNQKGLIKLYFLS---FLVTI--LISMILF----------NFHE---- +>Anourosorex_squamipes_mole_shrew +----MNENLFASFATPT-MMGLPIVILIIMFPSIMFPTPN-RLINNRLVTFQQWLIQLISKQMMAIHNQKGQTWTLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRYKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLMS-ISPLTAFITFIILVMLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISML-MTLFIVFQLKLSKFIYPQ-NPEPK-TLETLKY-NNP-W-ELKWTKIYSP-LS-LPLQ----MFVTRWLFSTNHKDIGTLYMVFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMLGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGSINFITTVINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIAGFVHWFPLFTGYTLSSTWAKIHFAIMFVGVNMTFFPQHFLGLAGMPRRYSDYPDAYTAWNTVSSMGSFISLTAVILMVFMVWEAFASKREVSTVELTTTNIEWLYGCPPPFHTFEEPVYINA-K--------MPYPFQLGLQDATSPIMEELTNFHDHALMIVFLISTLVLYLISSMLTTKLTHTSTMDAQAVETIWTILPAIILVLIALPSLRILYMMDEINNPTLTVKTVGHQWYWSYEYTDYDELNFDSYMIPTSELKPGDLRLLEVDNRAVLPMEMTIRMLVTSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICGSNHSFMPIVLELVPLKVFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSSVLLTLGLMTNTLTMYQWWRDVIREGTFQGHHTSVVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTHELGGYWPPAGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQALFITITLGIYFTILQATEYYEAPFTISDGIYGSTFFMATGFHGFHVIVGSTFLLVCFLRQLKYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNSFIDLPAPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFAFHFILPFIVAALAGVHLLFLHETGSNNPSGLSSDADKIPFHPYYTIKDILGVLMLILILMMLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLAFIPLLHTSKQRSMMFRPLSQCLFWVLVADLITLTWIGGQPVEHPFIIIGQLASILYFTLILVLMPLVSLFENNLM---KW--------MF--------MINLLMMIVPVLLAVAFLTLIERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFIKEPLRPTTSSVTMFIMAPILALTLALTMWIPLPMPYPLINMNLGLLFLLAVSSLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVILMNGSFTLNTLIITQQYSWLLMSTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFLGAMHIMYLPELYSINFTIKALFLTISFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFTSSI-P-PQT--MNP-MILSVILLTIVTGTLIVTMSSHWFMIWIGFEMNMLAFIPLLIKNYNPR-SMEASTKYFMTQATASMILMLAIIMNLIHEGQW--TISNISNPTASILMTMALVMKLGLSPFHFWVPEVTQGVSLTSGMILLTWQKIAPLSVFYQIYPSINLNLILSM-SLLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMTYEPTIMLLNLFIYITMTISTFMLFIFTSTTTTLSL---SHAWNKMPLITFLIMMVMLSLGGLPPLTGFLPKWMIIQELAKNNSIILPTTMAILSLLNLFFYMRLTYSTTLTMFPTTNNMKMKW-QYDNTKKIPLM-------APMITISTLTIPLLPLMINLT---MN-MMLALITNLTLASILVFVAFWLPQLNIYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNQLNIMLTMALALITLLALSLAYEWLQKG--LEWTE-MSLVHINIGLAFTVALLGLLMYRSHLMSSLLCLEGMMLTLFIMGSIMILNTHFTLSSMLPIILLVFAACEAAIGLSLLVMVSNTYGVDYVQNLNLLQCMLKIIMPTIMLIPLTWLSNKKFLWINITSYSMLISLMTL-SLFSQYDNSQTYFS-STFFSDPLSTPLLALTTWLLPLMLMASQNHLLKETNMRKKLYISTLIMLQIFLIMTFSATELIMFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIYIQNLTGTLNFTMTQLWAQNIQ-NSW-----SNDFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRISTLLNP-ITESMAYPFLLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGMQTILPLMATWWLLASLTNLALPPTINLIGELFIMLASFSWSNITIILTGINVVITALYSLYMLILTQRGKYSYHINTIKPTFTRENTLMTLHLFPLLLLSLNPKLILGTLY------MNLYTST-LIISLTMLMLPVMMS---LFPIYKT-KQYPYYVKSI-ISYAFATSLIPTLIFINSGHEAIISNWHWMTIETTKLSMSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLIFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFIVAMAWFLHNSNSWELQQIFMLDLN-HNTIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKTIQTFILCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFYALPFTTTSLTVGSLALTGTPFLTGFYSKDLIIEATNTSYTNAWALMITLIATS-LTAVYSTRIIYYSLLGQPRCSTLILINENNPLLINSIKRLLIGSIFAGFIISMNITPMTVPQMTMPGYIKLTALTVTLTGFMLALELNLATQNLK--MTYPNKIQKFSNLLGYFPTIIHRLLPSNSLLMSQKLSSMLLDYTWMETILPKSISKFQASSSI--MVSNQKGLIKLYFLS---FLITL--IISLLLF----------NFHV---- +>Cercopithecus_diana_Diana_monkey +----MNENLFTSFMAPT-ILNQPAAILIILFPMLLIPTSK-YPINNRLITIQHNLTQFTLKQMMITHSTKGQTWSLMLTSLIIFITMTNLLGLLPHSFTPTTQLSANLAMAIPLWAGTVITGLRFKTKSSLAHFLPQGTPTLLIPMLVMIETISLFIQPVALAVRLTANITAGHLLMHLAGNAVLALLT-ISPPAALLTSMLLTLLIVLEIAVALIQAYVFTLLVSLYLHNNTMPQLDTSTWFTIIMTTL-LTLYLIMQLKLLNMNYYQ-PPLQK-TPNKQTS-SNH-W-QLKWTKIYLP-LS---------MFINRWLFSTNHKDIGTLYLLFGAWAGVMGTALSLLIRAELGQPGSLLGNDHIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLTASAVVEAGAGTGWTVYPPLAGNLSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPTGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTMGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSFISSVAVILMTYMIWEAFASKRKASMIEQSSTNLEWLNGCPPPHHTFEEPVYIKL-NEKGESRTPMAHPVQLGLQDATSPIMEELITFHDYALMAISLISFLVLYALSSTLTTKLINTNTTDAQEMETIWTILPAIILILIALPSLRILYMTDEVNNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAIWFHFYSVTLLMVGLLTTMLSLLQWWRDIVRESTYQGHHTVPVQKNLRYGMALFIISEILFFTGFFWAFYHSSLAPTPHLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMSNNRKQTTQALLITILLGAYFTLLQISEYFEAPFTISDGIYGSTFFITTGFHGLHVIIGSTFLLICLIRQLLHHFTSNHHFGFEAAAWYWHFVDVVWLLLYISMYWWGS--MTPTRKSNPILKMINHSLIDLPTPSNISMWWNFGSLLASCLLLQIITGLFLAMHYSPDTSLAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLPKTWNTGIMLLLMTMMTAFMGYVLPWGQMSFWGATVITNLLSATPYIGTDLVQWVWGGYSIGNPTLSRFFTLHFILPFIITALTIVHLLFLHETGSNNPCGISSDSDKITFHPYYTIKDALGLLLFFFILMTLTLLLPNLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALFLSILILAIIPLLHKSKQQSMMFRPFSQLLFWLLVTTLLTLTWIGSQPVSQPFIAIGQMASVMYFTTALVLMPLASLIENKLL---KWT-------MT--------AMNLLLLTASTLIAMAFLTLVERKLLGYMQLRKGPNVVGPYGLLQPFADAVKLFIKEPLKPSTSATTLYIIAPALAFSIALLLWTPLPMPNPLINLNLGLLFILAMSSLTVYPILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLTSGSFNLNMLIVTQEHLWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTATIFLGTFYPTHTPELFTMCFVTKTLLLTSLFLWTRATYPRFRYDQLMHLLWKNFLPLTLAFLMWSISMLTTTSGI-P-PQT--MNP-LAQLIIYTTMTTGTLTTLLSSHWLLAWAGLEMNALAFTPILIKKTNPR-STEAATKYFLMQSTASMILMMAIIFNNLLSGHW--TMTSNTNQLSSLTMTIALAMKLGMAPFHFWIPEVTQGTPLIPGLLLLTWQKLAPISIMYQIYPSINTPTLLTL-STLSIMTGSWGGLNQTQLRKIMGYSSITHMGWMMMTLTYNPTITILYLTTYITLTTTMFLIFNLNSNTTTLAL---SLTWNKSTQLLPLTTSTLMSLGGLPPLTGFLPKWITIQELTMNSNFIIPPIMVTMTLLNLYFYMRLIYTVSMTLLPTPNNTKMKW-QLENTKPMLPI-------PTLTIISTLLLPISPLILTIS---MN-LALALTINTLLTSLLMIIMFWLPQLNTYTEKTNPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWALQTTNLPVMIKSAITLITILTLSLIYEWTQKG--LDWAE-MSPVFMNIVLTFTISLLGMLVYRSHLMASLLCLEGMMMSLFIMTTLMASNMHSPLTNIMPIILLVFAACETAVGLALLISISNTYGLDHIHNLSLLQCMLKMVIPTTMLLPMTWLSKNNMIWINLATHSLIISLIPL-LFFNQTNNNLLNHS-THLSSDPLTTPLLMLTAWLLPLMAMASQYHLHNKPPLQKKLYLSMMIFLQITLILTFMATELTLFYILFEATLIPTLIIITKWGNQTERLNAGTYFLFYTLTGSLPLLIMLTYTYNNVGSLNIMLLTLTNQKLT-ATW-----SHNLVWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTSILNP-LTEHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMSLVIMASLIQTPWSFSGAIILMIAHGLTSSMLFCLANSNYERTHSRIMMLTRGLQTLFPLMTFWWFSANLTNLALPPTINLVGELFVVTASFSWSPITIMLTGLNMLITALYSLHMFITMQRGKLTHHTINMKPPFTRESTLMFMHLTPIILLSLNPDIILGFTS--------MYSSI-MMTTLTSLTLPIIAT---LINPSKK-QLYPNYVKTI-MMYAFITSLIPTTLYTFLNQETTIWSWHWMMTQTLDLTLSFKLDYFSMMFTPIALFITWSIMEFSLWYMGSDPNINQFFKYLLIFLITMLILTTANNLLQLFIGWEGVGIMSFLLISWWHSRTDANTAAMQAVLYNRIGDIGLILAMAWFLLYYNSWDIQQMLILNSN-SSSLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNMLIQNLTLCLGAITTMFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKALLFMCSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLFIGNLALMGMPFLTGFYSKDLIIEAANTSYTNAWALSITLIATL-LTSAYSTRTILLTMTGSPRFPTLVNINENNPTLLNPIKRLTMGSIVAGFLITSNIPPTSLPQPTMPHYLKLSALCATTLGLLMTMDLILTTNQLK--MYNPSQTFKFSNMLGYFPITTHRMVPYQNLLMSQNLAFLLLDSMWLEKSMPKTVTHTHITISK--TVTTQKGMIKLYSLS---FFIPL--ILTLLLMM----------------- +>Propithecus_diadema_diademed_sifaka +----MNENLFASFITPT-IVGIPIVILIIAIPSILFPSPT-RLISNRLTSLQQWLIQLVLKQLMMMHSIKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTS-ISPTTASITFTILILLTILELAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITILSMV-LTLFIIFQLKVSKFNYPL-NPESK-TINVNKY-VSP-W-ETKWTKIYLP-LS-LPQQL---MFINRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTLWNTVSSIGSFISLTAVMLMIFMIWEAFASKREVLMVELTPTNLEWLHGCPPPYHTFEEPAYVKM-P--------MAYPVQLGFQDAASPIMEELLYFHDHTLMIVFLISSLVLYIISLMLTTKLMHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEITSPSLTLKTMGHQWYWSYEYTDYEDLSFDSYMIPSSDLKPGELRLLEVDNRVVLPTEMSIRMLISSEDVLHSWTVPSLGVKTDAIPGRLNQATLMTSRPGIYYGQCSEICGANHSFMPIVLELIPLKHFEEWLLSMF----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHHNSNTLLTLGLLTNLLTMYQWWRDVVREGTFQGHHTRAVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTAVLLASGVSITWAHHDLMEGNRTHMLQALLITISLGIYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKNHPLIKIMNSSFIDLPAPSNISSWWNFGSLLGACLALQIITGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFLCLFIHVGRGLYYGSFVLSETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMVHLLFLHETGSNNPLGIPSNPDKIPFHPYYTIKDLLGLLLLILPLMTLVFFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIIPLLQTAKQQSMMFRPLSQCLFWILVADLYTLTWIGGQPVEHPFITIGQTASILYFTLILIAMPTMGLIENKML---KW--------MF--------TLNLLLLIIPILLAMAFLILIERKILGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTLLYITAPTLALFIALIMWTPLPLPQPLINMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQEYTWLMIPSWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPYTPQTYSMTFATKALLLITLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSGI-P-PQM--MNP-IALMPIITTIFTGTMLTMISSHWLLIWMGLEMNMLAIIPILAKKTNPR-STEAATKYFLTQATASMLLMMTIVINAMYTGQW--NVTNIHNLLTTLTIIIALTMKLGMTPFHFWIPEVTQGVTLTAGMLLLTWQKLAPISIMLQIYPSMNTNILLAF-ALLSTLVGGWGGLNQTQLRKILAYSSIAHMGWMVAVLTFCPSLTILNLLVYLMLTITLITMLNINTSTTTLTL---SILWNKNPTITLMILTSLLSLGGLPPLTGFLPKWVIVQELTKNNNITMATIMVITALLNLYFYMRLIYSTSLTMFPTSNNMKMKW-QLQPTKFTLFL-------SSLITLSTLSLPLSPILLTLN---MN-LSLTLMIDITLALLLVVIAFWLPQLNIYTEKYSSYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNFMLTMALLLISVLAAGLAYEWSQKG--LEWEE-MPSIFTNIILAFATALLGTLIFRSHLMSSLLCLEGMMLSMFVLSTLIILNMHFTMSFMMPILLLVFAACEAAVGLALLVMVSNTYGLDYIQNLNLLQCMLKIIVPTIMLFPVTWYSSNSKIWINTTLYSLMINFVGL-SLLNQSNNNSNNFS-LNFFSDPLSSPLLMLTMWLLPLMIMASQYHLKKEPWLRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTMNFWLKELP-NSW-----SSNLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMVLDP-TTKSMAYPFLMLCLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELLVMMATFSWSNISIILMGLNMLITALYSLYMLITTQRGKPTFHMHNLNPSFTRENTLMSMHMLPLLFLTLNPKTILGPTFC-----MNLFSSL-TLITLTILALPIAMN---LT-NHKN-TSFAPHVKSS-IACAFITSLIPTMLFMFSGQEMIISNWHWMTIQTLKLSLSFKLDHFSILFVPVALFVTWSIMEFSMWYMSTDPNINQFFKYLLMFLITMVILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLYSNTWEFQQMFMLNQD-PNIIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPMMENNKTIQTMALCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKAMPFTSSSLIIGSLALTGMPFLTGFYSKDLIIESTNTSNTNAWALMITLIATS-LTAIYSTRIIFYVLTNQPRFTTTITVNENNPLLINSIKRLAFGSIFAGFFLSYNIPPMNLPQMTMPTYLKMTALMVTITGFILAMELNLMTKNLK--LKPSSNMFKFSEQLGYFPTTMHRLMPSLNLIMSQKTASLLLDLVWLEKTMPKNLSHLQITTSI--VVSNQKGLIKLYFIT---FLTSI--LLTTLLII----------------- +>Muntiacus_vuquangensis_giant_muntjac +----MNENLFASFITPM-ILGLPLATLIVMFPSLLFPTSN-RLVNNRLISLQQWVLQLVSKQMMSIHNAKGQTWTLMIMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLIIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLIMIMSMF-LALFIIFQLKISKHNFYF-NPEPT-PTKTQKQ-NTP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSIILLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGIYFTLLQISEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGALLLILFLMLLVLFMPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALISSILILILMPLLHTSKQRSMIFRPLSQCLFWILVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPMISMIENNLL---KWK-------MF--------MINVLMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYSINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-IIFIIILSTLMLGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFSLFMANSTTTTLSL---SHTWNKMPVMSTLILVTLLSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTLMAITALLNLYFYMRLTYSTALTMFPSVNNMKMKW-QFPTTKQMTLL-------PTMVILSTMLLPLTPILSVLE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNDLSTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFTVSLAGLLMYRSHLMSSLLCLEGMMLSLFVLATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTIMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFSDNSLNFS-LTFFSDSLSMPLLILTMWLLPLMLMASQHHLSKESLIRKKLYITMLILLQLFLIMTFTAAELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNITGSLNFLVLQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELLVVMSSFSWSNITIILMGLNMVITALYSLYMLIMTQRGKYTHHINVISPSFTRENALMSLHILPLLLLSLNPKVILGTLY------MNLFSSF-TLITLLLLVIPILAT---SSENYKT-SNYPFYVKTT-ISCAFLTSMIPTMMFIHTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRIGDIGFIMAMAWFLTNLNAWDLQQIFMLNPS-DSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKSMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLMNSIKRLMVGSLFAGFIISNNIPPMTIPQMTMPYHLKMMALAVTILGFILALEISNTTQNLK--FNYPTNTFKFSNMLGYFPTIMHRLAPYMNLMMSQKSASSLLDLIWLENILPKTTSLAQTKMSI--MITSQKGLIKLYFLS---FLVTI--IISMILF----------NFHV---- +>Ursus_thibetanus_thibetanus_Asiatic_black_bear +----MNENLFASFFTPM-MMGVPIVVLIVMFPSILFPSPS-RLIDNRLVSIQQWLVRLTSKQMLSIHNRKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVATGFRYKTKASLAHFLPQGTPFPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTS-ISTITALITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSITILSMV-LALFIMFQLKISKYKYPE-TPEPK-SLSSSKK-LMP-W-EEKWTKIYSP-LF-LPRW----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFMIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAVVELTSTNIEWLHGCPPPYHTFEEPAYVML-K--------MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISIMLTAKLTHTNTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMTPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMFLLSLGLTTNMLTMYQWWRDIIRESTFQGHHTPVVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGACWPPTGITPLNPLEVPLLNTSVLLASGVSITWTHHSLMDGSRKHMLQALLITISLGVYFTLLQASEYYEASFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFLRQLHFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSLIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDATTAFSSVAHICRDVHYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYLLSETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDALWALLLILALATLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILAIIPLLHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFTIIGQLASILYFTILLVLMPIAGIIENNLS---KW--------MF--------MINTISLVVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPVADAVKLFTKEPLRPLTSSATMFIMAPILALTLALTMWIPLPMPYPLVNMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFALSTLITTQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYTNIIMMNALTTILFFGAFHNPYMPELYTVNFTVKTLLLTASFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIITASI-P-PQM--MKP-PILIIITSTIVLGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMLGIIINLLHSGHW--TVSMIPNPIASTVITIALAMKLGLSPFHFWVPEVTQGVPLSSGMILLTWQKIAPLSVLYQISPSINPNLLVAM-AATSVLVGGWGGLNQTQLRKNLAYSSIAHMGWMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMHSLSTTTLSL---SHTWNKLPLIASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYATALTMFPSANNMKMKW-QFESTKKMILL-------PPLIVASTMLLPLTPLLSIMD---MN-LILALFTNMLLASLLVLIAFWLPQLNIYAEKASPYECGFDPVGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDNLMTMLIMALLLISLLAASLAYEWAEKG--LEWAE-MPVVYVNIFLAFIVSLMGLLIYRSHLMSSLLCLEGMMLSLFVMLTVTVLNNHFTLANMAPIILLVFAACEAALRLSLLVMVSNTYGTDYVQNLNLLQCMLKIIFPTMMLMPLTWASKPSMIWINTTAYSLLICLISL-TYFNQLSDNSLNFS-LLFFTDSLSAPLLALTTWLLPLMLMASQSHLSKETLTRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLHTQNNLGTLNFLMMQYWIQPLP-NSW-----SSVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLDP-LTSFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMVAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVVATFSWSNITITLMGANIIITALYSLYMLITTQRGKCTDHIKSIKPSFTRENALMALHLLPLLLLSLNPKVILGPIY------MNLFASS-IITTLLMLTMPIILT---GASTHKN-KFYPQYVKTT-ISYAFAVSTIPMMMFLYSGQEMIISNWHWMTIQTLKLTLSFKLDYFSMIFMPVALFVTWSIMEFSIWYMHTDPNINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVVYNRIGDVGFIMAMAWFLLNTNAWDFQQIFAIEHD-NLNIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTIQTAALCLGAMTTLFTAACALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKVLPLTTTALIIGTLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLVATS-MTAAYSTRIVFFALLGQPRFNPAIIINENNPLLVNSIKRLLLGSIFAGYLISHNITPTTIPQMTMPYYLKTTALAVTMLGFILALELNTTMQSLK--FNYPQNVFKFSNQLGYFPIIIHRFLPTMSLSMSQKMASMLLDTIWLENVLPKSISYFQMKSSI--TISNQKGLIKLYFLS---FMITL--TLSFLVL----------NFHEWLP- +>Sturnira_tildae_Tilda_yellow-shouldered_bat +----MNENLFASFITPT-MMGLPIVILIIMFPTMMFPSAN-RLITNRLVAIQQWLVHLTSKQMLSIHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVLLGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISMTTALITFMILILLTILEFAVALIQAYVFTLLVSLYLHDNAMPQLDTSTWFITIISTI-LTLFIIMQLKISSYYYYS-NPEPK-TTKTTKS-LIP-W-ETKWTKIYSP-LS-LPLR----MFISRWLFSTNHKDIGTLYLLFGAWAEMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGVGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSDKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIILQNTSKVVAQFQYVLFMGAVFDMMGGLVHWFPLFTGYTLNTTWDKIHFLVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFAAKREVSVAELTVTNLEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFMISSLVLYLISSMLTTRLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPSMTVKTMGHQWYWSYEYTDYTDLCFDSYMIPTQDLKAGDLRLLEVDNRVVLPMETTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSTSML----------MTHQTHAFHMVNPSPWPLTGALSALLLTSGLVMWFHFNSMTLLTLGLLANTLTMYQWWRDIVREGTFQGHHTPVVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTHELGGYWPPAGITPLNPLDVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQSLLITICLGLYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIINNSLVDLPAPSSLTSWWNFGSLLGVCLGVQILTGLFLAMHYTSDTATAFNSVTHICRDVNYGWLLRYLHANGASMFFIWLYLHVGRGLYYGSYTYSETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTELVQWIWGGFSVDKATLTRFFAFHFLLPFIVAALVMVHLLFLHETGSNNPTGIPSDPDMIPFHPYYTIKDILGFLIMLTALSALVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIIPMLHLSKQRSMMFRPLSQCLFWLLVAVLLTLTWIGGQPVEHPYIIIGQTASILYFLILLVLMPLTSITENRLL---KW--------MY--------LVNLLSMIVPVLLAVAFLTLIERKVLGYMQLRKGPNVVGPHGLLQPIADAVKLFTKEPLRPLTSSITMFIIAPVLALTLALTMWVPLPMPHPLINMNLSILFMLAMSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSYSLSTLIVTQEYMWLIYPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTTILFLGAYNNPTFPELYSINFAIKTLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTIPITTASI-P-PQT--MNP-LILSMIMSTVILGTVIVASSSHWLMVWIGFKMNMLAIIPMLMKTHHPR-STEAATKYFFTQATASMLLMMAVIINLLYSGHW--TITNMINPTATTILTLALAMKLGLSPFHFWVPEVTQGTPLSSGLILLTWQKLAPLSIMYATSPNINPELLITM-SALSVMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIIIYNPNMTLLNLTIYIMMTLTMFMLLIISTTTTTLSL---AHTWNKTPLITIMTLTTLLSLGGLPPLTGFMPKWMIIQELTKNNSIILPTFMAITALLNLYFYMRLTYATSLTMFPTSNSTKIKW-HFHNTKQTTLL-------SPLTIMSTMILPLTPLLTILY---MN-MAITLLTNTLLAALLVMIAFWLPQTNTYSEKVSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLQTMLPMALILISLLAISLAYEWLQEG--LEWSE-MSLTYMNMLLAFTISLMGLLMYRSHMMSSLLCLEGMMLSLFVMMTVTILNTHMTLASMLPIILLVFAACEAALGLSLLVMVSTIYGMDYVQNLNLLQCMLKIILPTIMLIPLTWLSKPKMVWINTTTHSLMINLLWF-PLINQFMDNTLNFS-PMFFSDSLSTPLLMLTMWLLPLMIIASQFHLTNEPLIRKKSYITMLVLLQIFLIMTFTATELIMFYILFEATLLPTLIIITRWGNQAERLNAGLYFLFYTLVGSLPLLIALTYLQNLTGTLNFLLIQHWALPLS-TSW-----NTNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITILLEP-LTEYMAYPFMLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAVLIQTPWSFMGATALMIAHGLTSSVLFCLANSNYERVHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVLAMFSWSHLSLTLLGLNIVLTALYSLYMLIMTQRGKNTQHINNIPPSYTRENTLMTMHILPLLLLSINPKIILGCPY------MNLASST-MLLSLTMMTLPILTT---TLHPQNS-PKYPDYVKTM-VSYSFFISMIPTTLFIFSNQETMISNWHWITIQTLKLSLSFKLDFFSVLFMPVALFVTWSILEFSMWYMHSDPNINRFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAYFLTYTNTWEIQQIFSLNTT-PTSLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNPLAQTTALCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLGDEQDIRKMGGLYKTMPFTSTAMTVGSLALTGTPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATA-LTAVYSTRIIFFALLGQPRLPSLILIKENNPLLLNAIKRLLMGSIFAGFLISMNIPPTTILPMTMPPYLKLTALTVTLTGFALALELNLSALNLK--FKTPSNMFKFSNLLGFFPTIIHRLYPSTNLTLGQKSASLLLDLTWLEIFFPKTISLIQMKTST--LVSNQKGLIKLYFLS---FLITL--LLALILL----------NPLA---- +>Galago_senegalensis_Senegal_galago +----MNQNLFASFITPT-MMGLPIVILIIMFPLILFPAPT-RLVNNRLTSMQQWLTQLILKQLMTTHNTKGRTWSLMLISLIMFIGSTNLLGLLPHTFTPTTQLSMNLGMALPLWTATVLTGFRHKTKASLAHFLPQGTPPPLIPMLVLIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLALTS-ISPATASITFTILILLSALELAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWTIPIISMT-LTLFTLFQLKFSKFLYPL-NPVQK-TMKTMKQ-DNP-W-EKKWTKTYLP-LS-LPLQ----MFVNRWLYSTNHKDIGTLYLIFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVIITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVSYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNINWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFTLDPTWAKIHFAIMFAGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSIGSFISLTAVMLMIFMVWEAFASKREVLMVDLTTTNLEWLHGCPPPYHTFEEPTYVKA----------MAHAVQYGFQDAAAPIMEELLYFHDHTLMIVFMISSLVLYIISLMLSTELTHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEIETPSLTLKTVGHQWYWSYEYTDYDKLCFDSYMTPTPDLEPGDLRLLEVDNRVVLPTEMSIRMLITSEDVLHSWTVPALGIKTDAIPGRLNQATLMTSRVGIYYGQCSEICGANHSYMPIVLELVPLKYFEEWLLKTL----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNNTTLLSLGFLANTLTMLQWWRDIIREGTFQGHHTPTVQKGLRYGMILFIISEVFFFAGFFWSFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGHRKHMTQALTTTIILGLYFTLLQASEYFETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLLICLLRQLNFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKQHPLAKMINHSFIDLPAPSNISSWWNFGSLLGLCLMIQITTGLFLAMHYTSDTSTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFMHIGRGLYYGSFTFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTGLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMIHLLFLHETGSNNPSGISSDSDKIPFHPYYTIKDLLGVILLLLSLFSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILALIPYLHTAKQRSMMFRPLSQCLYWMLVADLFTLTWIGGQPVENPFITIGQTASIIYFLIVLILMPLTNLLENKLL---KW--------MF--------MMNLLLLIIPIILAMAFLTLLERKVLGYMQLRKGPNVVGPNGLLQPFADAMKLFIKEPLQPLTSSTLLYITAPTLALSIALIMWAPIPIPLPLINMNLGVLFILASSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIIMMSGSFTLSTLILTQEHSWLFLSSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTIFLSTPHNSYSPEYFSINFTLKTLILTIAFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPIILASI-P-PQT--MKP-SISPLIYLTLFTGTILTTISSHWLLIWIGLEMNMLAIIPILIKKAMPR-STEAATKYFLTQATASMLLMMAVIINTMQTGQW--T-TKIDNPTTSLIILLALTMKLGMAPFHFWLPEVTQGVTLVSGMILLTWQKLAPITIFLQLHQSMNTSILMSI-ALLSILIGGWGGLNQTQLRKILAFSSIAHMGWMAAVLTFNPSLTILNLLIYLILTFSMFMMLISNSNTTTLSL---THLWNKTPVFISMMLIILLSLGGLPPLSGFLPKWTIIQDLSKNYNIAMPTLMAILALLNLFFYMRLVYSSSLTMFPTTNSTKMKW-QFETLTPITIT-------APLITMSSMLIPLSPMISTLN---MN-TMLLLLVNTTLASIMVTVAFWLPQLNIYTEKYNPYECGFDPTGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWALQSHTLILTLAMTLLLIMILALGLAYEWTQKG--LEWEE-MPSISTNIILAFTAALLGVLIYRSHLMSSLLCLEGMMLSMFILVSLTILNLHFSLATVTPIILLVFAACEAAIGLALLVMVSNTYGMDYIQNLNLLQCMLKIIIPTIMLIPVTWLSNFQTLWTNITIYSFMISSISL-YLLYQPNSY-LNFS-TMYSSDTLSTPLLILTTWLLPLMTMASQHHLTKEPLTRKKLYITMLISLQVFLIVTFSASELILFYILFETTLIPTLIIITRWGNQTERLNAGLYFLFYTLLGSLPLLVILIHTQNLMGSLNLSILSFYFQDMSIFPW-----SNNLTWLACMLAFLVKMPLYGTHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITYILNP-ITDLMSYPFLILSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMMFCLANSNYERIHSRTMTLARGLQSLLPLMAIWWLTASLANLALPPTINLIGELIIIITTFSWSKLTILLTGLNTLITAIYSLYMFITTQRGKPTYHTHNIKPSHTRENILMSLHILPLLSLSLNPKIVLGLTL------MNMLLPTTTFTTLIVLTLPILFT---ITNNHND-TPFPNLVKSS-ISTAFMISLIPALLFIYLGQDSSITNWHWTTMQTLNLSTSLKLDYFSILFMPVALFVTWSIMEFSMWYMHSDPQINRFLKYLLLFLITMMILVTSNNFFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILFNRIGDIGFILSMTWFLLYSNSWDIQQMLILNPN-TNILPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLLENNKTIQTVTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLFKPMPFTASSLTIGNLALTGTPFLTGFYSKDLIIETANTSYTNAWALLLTLMATS-LTAVYSTRIIFFALLGQPRFLAKTNINENNPLLINPIKRLATGSIVAGYIISNNIPPMSTPQMTMPIYLKLTAVAMTILGFYLAMEINLLTSNLK--LKHTYSPYLFSNSLGFFPTTIHRLLPNLDLKLSQNMSSLLLDLSWLEKTMPKNLSQLNMIASK--TISNQKGLIKLYFTS---FLTSV--LLTMALMT----------------- +>Cheirogaleus_medius_Lesser_dwarf_lemur +----MNENLFASFTTPT-IMGIPIVILIILTPSIFFPSSP-HLLGNRLMSLQQWLVQLVLKQLMAIHNIKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAATVIMGFRHKTKKSLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATMALTS-ISPTISSITFTILMLLTVLEFAVALIQAYVFTLLVSLYLHDNAMPQLETSTWFITILSMV-LTLFIVFQLKISKLNFPL-KPELK-ITSKYQH-TNP-W-DTKWTKIYSP-LS-LPQPS---MFINRWFYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAMSQYQTPLFVWSVVITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYSLDNTWAKIHFAIMFVGVNMTFFPQHFLGLAGMPRRYSDYPDAYTMWNTVSSIGSFISLTAVMLMIFMIWEAFASKREITMVELTPTNLEWLHGCPPPYHTFEEPTYVKA-LIEKG----MACPVQLGFQDAASPIMEELTYFHDHTLMIVFLISSLVLYIISLMLTTELTHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEITTPSLTLKTMGHQWYWSYEYTDYENLCFDSYMTPSSDLKPGELRLLEVDNRVVLPTEMSIRMLISSEDVLHSWTVPSLGVKTDAIPGRLNQATLMTSRPGIYYGQCSEICGANHSFMPIVLELVPLKHFEEWLLAML----------MTHQIHAYHMVNPSPWPLTGALSALLMTSGLALWFHFNSSTLLFLGLLTNLLTMYQWWRDIVREGTFQGHHTPAVQKGLRYGMILFIISEIFFFTGFFWAFYHSSLAPTPELGGYWPPAGIKPLNPLEVPLLNTTVLLASGVSITWAHHSLMEGDRTSMLQSLLITITLGVYFTLLQASEYLETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTICLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MIPMRKSNPIMKLINHSLIDLPTPSNISAWWNFGSLLAICLILQIITGLFLAMHYSPSTSSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGIALLLMVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSIDNPTLTRFFTLHFTLPFIITAFTVLHLLFLHETGSNNPCGIPSNSDKIPFHPYYTIKDMLGLVLLILLLMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLMSILILMIIPMLHKSKQQSMMFRPFSQFTLWLLITVLLTLTWIGSQPVNQPFIMIGQVASMMYFTTILILMPLASMIENNLL---KWT-------MF--------MVNLLLLIIPVLLAMAFFTLIERKILGYMQLRKGPNVVGPHGLLQPFADAMKLFIKEPLRPLTSSSLLYTVAPTLALSIALIMWIPMPLPYPLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEYLWLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTIIFLGALYDPHIPETYTTNFAIKTLLLATLFLWVRASYPRFRYDQLMHLLWKSFLPLTLALCMWYISLPILMSCI-P-PQM--MKP-SILMLILMTIFSGTMLTMISSHWLLIWIGLEINMLSLIPILTKKMSPR-STEAATKYFLTQATASMLLMFTIIMNAMNSGQW--TTINTYNNLTSFTIIIALTMKLGMTPFHFWVPEVTQGVTLTAGMLLLTWQKLAPISIMIQIYPSMNPNILLLV-SLLSILVGGWGGLNQTQLRKILAYSSIAHMGWMVSILMFYPSLTILNLLIYLMLTITVFTMLNINTNTTTLAL---SNLWNKTPTITMTILISLLSLGGLPPLMGFLPKWAIIQELTKNSNIIMATTMAIMALLNLYFYMRLIYSTSLTMFPSSNNMKVKW-QLQPTKQTLLL-------SPLVILSTLTLPLSPAFLIMN---MN-LPLTLLTDILLVLVLVFIAFWLPQLNIYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNNLKLTTIVALTLITILALSLAYEWLQKG--LEWEE-MPSISTNMTLAFITALLGMLMFRSHLMSSLLCLEGMMLSMFILSTLLILNMQFTITFIMPILLLVFAACEAAIGLALLVTVSNTYGLDHIQNLNLLQCMLKIITPTIMLFPMIWYSNNNKIWINTTLYSLMISIMML-LLLNQTDNNSNNFS-LTFFSDSLSSPLLMLTVWLLPLMIMASQHHLMKETWMRKKLYLSMLIFLQVFLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYTQNFLGSLNMLTITLYNQELS-NSW-----SNSFLWMACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMILDP-MTKFLAYPLLMLCLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVTMAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSFLPLMATWWLLASLTNLALPPFINLIGELLVIMASFSWSNITIILTGLNMFITALYSLYMLTVTQRGKSTYHMHNLNPSFTRENTLMSMHMFPIALLTLNPKLILGPTY------MMMHTSI-FMLALTPLIFPIIIT---LISPNKN-NMYPNYVKTT-MMFTFTISLIPTTMYTFLGQDTIMSTWHWMTIQSLEITLSFKLDYYSVMFTPIALFITWCIMEFSLWYMDSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYARTDANTAAIQAILYNRIGDIGFILAMMWFLLHYNSWDLQQMFILDPN-PDLLPLVGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPPMENNTTIQSLTLCLGAITTMFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFICSGSMIHNLNNEQDIRKMGGLFKTMPLTSTSLMIGSLALTGMPFLTGYYSKDLIIETANTSYTNAWALCITLIATS-MTSAYSTRTIILTLTGSPRFSTSVYINENNPTLLNPMKRLAAGSLLAGFFIVNNISPTTVPQLTMPYHLKLLALCVTTLGFLTALDLTLMTNSLK--MNTPSHMFKFSNMLGYFTITIHRTVPYQNLTMSQNLAFLLLDLLWLEKSMPKTISHTHIITAI--TSTTQKGMIKLYFLS---FLISL--TLIPLLIM----------------- +>Otolemur_crassicaudatus_thick-tailed_bush_baby +----MNQNLFASFATPT-MMGLPIITLIIMFPYTLFPTPT-RLLNNRLTSLQQWLAHLILKQLMITHNTKGRTWSLMLVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPLWAATVFTGFRHKTKASLAHFLPQGTPPPLIPMLILIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLALTS-ISPAAASITFIILALLSALELAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWTITIISAT-LTLLILFQLKFSKFSHPL-NPTPK-ITGALKQ-DNP-W-EKKWTKTYLP-LS-LPLQ----MFVNRWLYSTNHKDIGTLYLIFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVIITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVSYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDATWAKIHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSIGSFISLTAVMLMIFMVWEAFASKREVLMVDLTTTNLEWLHGCPPPYHTFEEPTYVKS----------MAHAVQFGFQDAASPIMEELLYFHDHTLMIVFTISSLVLYIISLMLSTELTHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEINTPSLTLKTMGHQWYWSYEYTDYDNLCFDSYMTPTPDLEPGDLRLLEVDNRVVLPTEMSIRMLISSEDVLHSWTVPALGIKTDAIPGRLNQATLMTSRVGIYYGQCSEICGANHSFMPIVLELVPLKYFEEWLLKTL----------MTHQAHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLSLGLLANILTMLQWWRDIVREGTFQGHHTPTVQKGLRYGMILFIISEVFFFAGFFWSFYHSSLAPTPELGGCWPPTGVNPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGHRKHMTQALSTTIALGLYFTLLQMSEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCLLRQLNFHFTPKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKHHPLAKMINHSFIDLPAPSNISSWWNFGSLLGLCLVIQITTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVIRYLHANGASMFFICLFMHIGRGLYYGSFTFLETWNIGITLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMIHLLFLHESGSNNPSGIPSDSDKIPFHPYYTIKDLLGAILLLLTLFSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALALSILILALIPFLHTAKQRSMMFRPLSQCLYWVLMADLLTLTWIGGQPVENPFITIGQVASVIYFSTILILMPLTNLLENKLL---KW--------MF--------VLNLLLLIIPIILAMAFLTLLERKILGYMQLRKGPNVVGPDGLLQPFADAMKLFIKEPLKPLTSSTLLYITAPTLALSIALIMWAPLPIPLPLINMNLGVLFILAASSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIIMMSGSFTLSTLILAQEHSWLILPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTIFLSSLHSTHFPEHFSINFTLKTLILTTTFLWVRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHASLPISLANI-P-PQT--MKP-TILPLIYLTLFTGTILTTISSHWLLIWVGLEMNMLAVTPILIKKAMPR-STEAATKYFLTQATASMLLMMAIIINAMHTGQW--T-TKTNNSMTPLIILLALAMKLGMAPFHFWVPEVTQGVALTSGMILLTWQKLAPIAILLQLHQSMEPDIIMPI-ALLSILVGGWGGLNQTQLRKILAFSSIAHMGWMIAVLTFNPSSTILNLLIYLILTMTMFTMLIPNSNTTTLSL---AHLWNKAPTFILTILITLLSLGGLPPLSGFLPKWIIIQDLSKNYNIAMSTFMAILALLNLFFYMRLVYSSSLTLFPTTNSMKMKW-QFEILPPITIT-------APLITLSSMLIPLSPMISILN---MN-TILLLTINATLASAMVMLAFWLPQLNIYTEKYSPYECGFDPTGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWALQTYTLNLTLAMTLLLITILALGLAYEWTQKG--LEWQE-MPSISTNIILAFTTALLGTLIYRSHLMSSLLCLEGMMLSMFILTSLTTLNLHFSLTTMAPIILLVFAACEAAIGLALLVMVSNTYGMDYIQNLNLLQCMLKIIVPTVMLIPVTWLSNHQTLWTNTTMYSFMISLISL-YLLYQPSSN-LNFS-TVYSSDTLSTPLLILTTWLLPLMIMASQHHLSKEPLTRKKLYITMLISLQTFLIATFSASELILFYILFETTLIPTLIVITRWGNQTERLNAGLYFLFYTLLGSLPLLVALIHTQNFVGSLNLSILALYLHDTPISPW-----SNSLTWLACMLAFLVKMPLYGTHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITNILSP-TTNIMPYPFLILSLWGTIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSLMFCLANSNYERIHSRTMILARGLQSLLPLMAIWWLTAGLANLALPPTINLIGELIIIITSFSWSKLTILLTGLNTLITAIYSLYMFITTQRGKPTYHTYNIKPSHTRENILMSLHILPLLLLSLNPKIILGPTL------MNMVTPATALTTLTILTSPVLLP---LANSHNN-TSFPNFVKLS-VSSAFMVSLLPALLFTHLGQDSIITNWHWVTMQTLNLSTSLKLDYFSVLFVPIALFVTWSIMEFSMWYMHSDPQINRFFKYLLLFLITMMILVTSNNFFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILFNRIGDIGFILAMVWFLLHSNSWEIQQILILNSN-DSTLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLLENNKTMQTMTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKPMPFTASSLMIGSLALTGTPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-LTAVYSTRIIFFALLGQPRFPTSININENNPLLINSVKRLAIGSIIAGYIISNNIPPMTTPQMTMPTHLKLTAVAVTILGFSLAMEINLLTSNLK--LKHSYLPYLFSNSLGFFPTIIHRLMPNSNLKLSHDMPTLLLDLNWLEKSMPKNLSQLNLLASK--AISNQKGLIKLYFIS---FLTSI--LLTVTLMI----------------- +>Rhinolophus_macrotis_Big-eared_Horseshoe_Bat +----MNENLFASFITPT-MMGLPIVILIIMFPTILFPSTN-RLISNRLVAIQQWLIHMTSKQMMAIHNPKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALLS-ISTATAFITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITIFSMI-LTLFIMMQLKVSKHSFHS-NPEPL-EVKSSKH-ATP-W-ETKWTKIYSP-LS-LPQR----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMVFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLDSTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMVFMVWEAFASKREVLTVELTTTNLEWMHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTSLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSSSMV----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSTLLLTLGLLANMLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIFLGLYFTLLQASEYHETSFTIADGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLFKIINDSFIDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGIYYGSYTFSETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTTLVEWVWGGFSVDKATLTRFFALHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSDMDMIPFHPYYTIKDILGLVLMLMALLSLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPLASIAENHLL---KW--------MF--------MINLLLLIVPILLAVAFLTLIERKVLGYMQLRKGPNVVGPYGLLQPIANAVKLFTKEPLCPLTSSISMFIIAPVLALTLALTMWTPLPMPHTLINLNLGVLFMLAMSSLAMYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSMLLLSGSFSLSTLITTQEHTWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYTGGPFTLFFLAEYANVIMMNIFTTTLFLGAFHNPLMPELYTANFVLKSLLLTVSFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVAMLVITAGI-P-PQM--MNP-RIFATISSTIILGTLIVMTSSHWLLVWIGFEMNMLAIIPMMMKRSNPR-STEASTKYFLTQATASLLLMLAIIINLLHSGQW--TVTNILSPTASTIMTLALTMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSILYQISHSINLDILLTM-SILSILIGGWGGLNQTQLRKILAYSSIAHMGWMTAIMTYNPTMTFLNLILYILMTTTTFMLFMTNSSTTTLSL---SRLWNKMPLLTASILAIMLSLGGLPPLTGFLPKWMIIQELTKNDSIILPTLMAITALLNLFFYMRLTYTTSLTMFPSTNNMKIKW-QFESTKWTTYL-------SPMIILSTLTLPLAPMLSTLN---MN-FMLTLLTNTFLALLLVTIAFWLPQTNVYSEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQANNLEVMLTTALLLISLLAISLAYEWSQKG--LEWTE-MALIYTNTLLAFTISLLGLLLYRSHLMSSLLCLEGMMLSMFVMVAVMILNTHLTTSSMMPIVLLVFAACEAALGLSLLVMVSNTYGIDHVQNLNLLQCMLKIILPTTMLIPLVWLSKHTMIWINPTVYSLMISLLSL-PMLNQFTDNSLNSS-LMFFSDSLSTPLLMLTTWLLPLMLIASQHHLANESLNQKKLFMTMLILLQVFLIMTFTATELILFYILFEATLLPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIYIQNITGTLNFLLSTYWLQPLS-PSW-----SNAFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITMLLNP-VTDFMAYPFLILSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTILPLMAAWWLLASLTNLALPPTINLIGELFVVMSTFSWSSMSIILMGTNIVITALYSLYMLITTQRGKYTYHINNLIPSFTRENTLMTMHLTPLLLLSINPKIILGTLY------MNLFTPL-ILISLLILTTPIITA---TLNLHKT-NTYPHYVKTT-IVWAFMISLIPTMMFIQSGQEVILMNWHWVSIQTLKISMSFKLDYFSMIFMPVALFVTWSIMEFSLWYMHLDPYIDRFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFLMAMAWFLFNTNTWDLQQIFSLNLN-NTDLPLAGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLIENNKTIQSMVLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLYNTLPFTTTALTVGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLITLVATS-LTAVYSTRIIFFALLGQPRFPTLILINENNPYLMNSIKRLLIGSIFAGFFITNTIPPMTVPQMTMPWYLKMTALAVTILGFTIAMDLSLATQNLK--FKHPSTPFKFSNMLGYFPTVMHRLMPMMNLSLSQKTASLLLDLTWMENALPKSISLIQMKTSA--LVSSQKGQIKLYFLS---FLLTL--TLSLIVL----------SLHE---- +>Sus_celebensis_Celebes_wild_boar +----MNENLFASFITPT-MMGLPIVTLIIMFPSLLFPTPK-RLINNRTISVQQWLIQLTSKQMMAIHNQKGQTWSLMLMSLIMFIGSTNILGLLPHSFTPTTQLSMNLGMAIPLWSATVFTGFRHKTKASLAHFLPQGTPAPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALLN-ISTMTAFITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITITSMI-MTLFILFQLKISNYSYPA-SPEST-ELKTQKH-NTP-W-EMKWTKIYLP-LS-LPLR----MFVNRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQAWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSAVELTSTNLEWLHGCPPPYHTFEEPTYINL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGEMRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSTSMLTG--------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMLLLSLGLLTNTLTMYQWWRDIIRESTFQGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGDRKHMIQALSITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYGSIYWWGS--MTNIRKSHPLMKIINNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWVIRYLHANGASMFFICLFIHVGRGLYYGSYMFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALATVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGALFMMLILLILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVASILILILMPMLHTSKQRSMMFRPLSQCLFWMLVADLITLTWIGGQPVEHPFIVIGQLASILYFLIILVLMPITSIIENNLL---KW--------MF--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADALKLFTKEPLRPATSSISMFIIAPILALSLALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLITTQEHIWMIFTSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFMAEYANIIMMNAFTAILFLGTFHDPHTSELYTINFVLKTLALTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHISLPIMTASI-P-PQS--MNP-IIYATLIMTVMSGTMLVMTSSHWLLIWIGFEMNLLAMIPVLMKNFNPR-ATEAATKYFLTQATASMMLMMAIIINLLYSGQW--TITKMFNPVAMTMMTMALAMKLGLSPFHFWVPEVTQGISLQAGLLLLTWQKLAPLSVLCQIPQSINPSLMLTM-AMLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNTTMTILNLLIYITMTLAMFMLLIHSSATTTLSL---SHTWNKMPIITSLMMVTLLSMGGLPPLSGFMPKWMIIQEMTKNESIIMPTLMAMAALLNLYFYMRLAYSSSLTMFPSTNNMKMKW-QFEHTKQMKLL-------PTMIVLSTLILPMTPALSSLN---MN-IMLTLFTNVTLASLLVLIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLKTMLTTALFLLTLLAASLAYEWTQKG--LEWTE-MPLVYMNIIVAFAIALAGLLMYRSHLMSSLLCLEGMMLSLFIMSTLIVLNTHFTLASMMPIILLVFAACETALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTTMLLPMTWMSKHNMIWINATVHSLLISLISL-SLLNQLGENSLNFS-LTFFSDSLSTPLLVLTTWLLPLMLMASQSHLSKETTTRKKLYITMLILLQLFLIMTFTATELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYIQNTTGSLNFLIIHYWSHPLS-NSW-----SNIFMWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTILNP-LTNYMAYPFLMLSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERVHSRTMILARGLQTLLPLMATWWLMASLTNLALPPSINLIGELFIITASFSWSNITIILMGMNMMITALYSLYMLIMTQRGKYTHHINNIKPTFTRENALMALHILPLLLLTLNPKMILGPLY------MNPFASL-TLTTLTILTIPIMMS---NSNIYKT-NLYPNYVKTT-VSYAFTLSLVPLLMFIHTGQEMIISNWHWMTLQTVELSLSFKMDYFSVMFIPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFVLSMAWFLSHSNAWDFQQIFMLNNE-CPNMPLIGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMETNKLVQTMTLCLGAITTLFTALCATTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICMHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKTMPFTTTALIIGSLALTGMPYLTGFYSKDLIIETANTSYTNAWALLMTLIATS-LTAAYSTRIIFFTFLGQPRFPPLVLINENNPLLINSIKRLLIGSIFAGFIISNNIPPMTVPNMTMPLYMKMTALIVTIMGFMLALELNNTTHYLK--FKYPSQTYKFSNMLGYYPSIMHRLPTYHNLSMSQKSASSLLDLIWLETILPKTTSYIQMKMSI--MVSNQKGLIKLYFLS---FLITI--MISMMLF----------NYHE---- +>Macaca_mulatta_Rhesus_monkey +----MNENLFTPFSAPT-ILNQPATIPIILFPTLLILTPK-HPINNRLATIQQNLTRFTLKQMMMTHNAKGQTWSLMLTSLITFTATTNLLGLMPYSFTPTTQLSMNLAMAIPLWAGTVMVGLRFKTKNSLAHLLPQGTPTPLIPMLVAIETISLLIQPVALAVRLTANITAGHLLMHLIGNTVLALST-TNLSMALLASTLLVLLTILEIAVALIQAYVFTLLISLYLRNNTMPQLDTSTWFTTIMTML-PTLYLIMQLKLLNTNHHQ-PPLTK-TPTLQSH-NVR-W-QPKWTKTCLP-LS-QPQQF---MLINRWLFSTNHKDIGTLYLLFGAWAGIMGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFTVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASAVVEAGAGTGWTVYPPLAGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAVSQYQTPLFVWSILITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGMVSHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFMHWFPLFSGYTLNQTCAKAHFIIMFMGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTLSSMGSFISLVAVILMIYMIWEAFASKRKVLLIEQPLTNLEWLNGCPPPYHTFEEPPYIKL----------MAHPVQLSLQDATSPVMEELITFHDHAFMAMSLISFLVLYALLSTLTTKLTNTSITDAQEMETIWTILPAIILILIALPSLRILYLTDEVNDPSFTIKSIGHQWYWTYEYTDYGSLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHAYHMVKPSPWPLTGALSAFLMTSGLVMWFHFYSTTLLMLGLLTNTLTLYQWWRDIVRESTYQGHHTTPVQKSLRYGMTLFIISEAFFFVGFFWAFYHSSLAPTPCLGGHWPPTGITPLNPMEVPLLNTSVLLASGVTITWAHHSLMNNDRKQTIQALLITILLGTYFTLLQISEYFEAPFTISDGIYGSTFFITTGFHGLHVIIGSTFLFVCLIRQLLHHFTSNHHFGFEAAAWYWHFVDVIWLLLYISVYWWGS--MTPMRKSNPILKMINRSFIDLPAPPNLSMWWNFGSLLAACLILQIITGLLLAMHYSPDTSSAFSSIAHITRDVKYGWITRYLHANGASMLFICLFLHIGRGLYYGSYLLLETWNIGIMLLLMTMTTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWIWGGYAIDSPTLTRFFTLHFILPFIIIALTTVHLLFLHETGSNNPCGISSDSDKIAFHPYYTTKDILGLVLLLFILATLTLLSPNLLNDPDNYIPADPLNTPPHIKPEWYFLFAYTILRSIPNKLGGVLALFLSILILAAIPMLHKSKQQSMMFRPLSQFLFWLLITILLTLTWIGSEPVVQPLTTIGQVASMMYFITILILMPLASLIENNLL---KWT-------MT--------TVNLLLMIMPTLAAMAFLTLVERKLLGHMQLRKGPNIVGPCGLLQPFADAVKLFTKEPLKPATSTTILYVVAPALAFFIALLLWTPLPMPNALINFNLGLLFILAMLSLIVYSILWSGWASNSNYALIGALRAVAQTISYEVTLTIILLSVLLMSGSFNLNTLITTQEHLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYTNIIMMNALTTTIFLGTSHSTYSPELFTTCFATKTLFLTSLFLWIRAAYPRFRYDQLMHLLWKNFLPLTLALLMWSTSMPIAISSI-P-PQT--MNP-LAQPIIYTTMITGTLITTLSSHWFLAWTGLEMNMLAFIPILMKKTSLR-STEAATKYFLIQSTASMVLMMAIISNNLLSGCW--TTTNYISQPPSLMMTTALAMKLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQIHPSINTHILLTL-STLSIAVGSWGGLNQTQLRKILGYSSITHMGWMMMTLVYNPATTIFYLTTYIILTTTMFLTLNLSSSTTTLML---SRTWNKSTHLAPLMAPILMSLGGLPPLTGFLPKWIIIQELTMNNNFLIPSIMTIMTLLNLYFYMRLIYTTSLTLFPTSNNTKMTW-QLENTKPTLLI-------PPLIITSTLLLPISPLLLTLH---MN-LVLALTINTLLTSLLMIIMFWLPQLNPYTEKTSPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWAIQTTNLPMMIKSTIAFIIILILSLTYEWTQKG--LDWAE-MTLTYMNIMLAFAISLLGMLTYRSHLVASLLCLEGMMMSLFIMATLIASNTHFPLINIMPIILLVFAACETAVGLALLISISNTYGLDYVHNLNLLQCMLKMIIPTTMLLPMTWLSKNNTIWINLTMHSLTISLIPL-LFFNQTSTNLLNHS-TYLSSDPLAAPLLTLTIWLLPLMIMASQYHLYNEPPSQKKLFLFTMILLQITLILTFMATELIMFYILFETTLIPTLIIITKWGNQAKRLNASTYFLFYTLTGSLPLLIMLSHTYNNTGSLNITLLTLTDQKLT-TTW-----SHNFTWLACMMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTPILNP-LTEYMAYPFLMLSLWGMIMTG--LTCLRQTDLKSLIAYSSVSHMALVIVASLIQTPWSFSGATILMIAHGLTSSMYFCLANSNYERTHSRTMLLSRGLQILLPLTAFWWLTASLTNLALPPTINLLGELFVITTSFSWSHITIMLTGLNMLITALYSLHMFITTQRGMLTHHMINMKPSFTRENMLMFMHLAPIILLSLNPNIILGFTS------MTMHTPI-MMTTLISLTLPIFAT---LINPYKK-RPYPDYVKTT-VMYAFTISLPSTTLFIFSNQETTIWSWHWMMAQTLDLTLSFKLDYFSMMFIPIALFITWSIMEFSLWYMNSDPNINQFFKYLLIFLTAMLILVTANNLFQFLIGWEGVGIMSFLLISWWYARTDANTAAIQAILYNRIGDIGLILAMAWFLLHYNSWDLQQMLALNFN-SSSLPLMGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVIAGVFLLIRFHPLMETNTMIQNLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMITIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSMIIGNLALTGMPFLTGFYSKDLIIEATNTSYTNAWALFITLITTS-LTSAYSTRTILLTLTGQPRFPALTNINENNPALLNPIKRLTMGSMITGFLITNNIPPTLLPQPTMPLYLKLSALCATVLGFLAALDLTLMTNKLK--MKTPSQMFKFSNMLGYFPTTIHRTIPYQNLLMSQNLALLLLDSAWLEKSMPKMISQAHITASM--TVTTQKGMIKLYSLS---FLIPL--TLALILMM----------------- +>Macaca_fuscata_Japanese_macaque +----MNENLFTSFSTPT-ILNQPAAIPIILFPTLLVLTPK-HPINNRLATIQQDLTRFILKQMMMTHNAKGQTWSLMLMSLITFIAMTNLLGLMPYSFTPTTQLSMNLAMAIPLWAGTVVVGLRFKTKNSLAHLLPQGTPTPLIPMLVVIETISLLIQPVALAVRLTANITAGHLLMHLIGNAVLALST-ANLSMTLLTSTLLVLLTTLEIAVALIQAYVFALLISLYLHNNTMPQLDTSTWFTIIMTML-PTLYLIMQLKLLNTNHYQ-PPLTK-NPTLQSH-NIR-W-QPKWTKTCLP-LS-QPQQF---MLINRWLFSTNHKDIGTLYLLFGAWAGIMGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFTVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASAVVEAGAGTGWTVYPPLAGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAVSQYQTPLFVWSILITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFMHWFPLFSGYTLDQTCAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTLSSMGSFISLVAVILMIYMIWEAFASKRKVLLIEQPLTNLEWLNGCPPPYHTFEEPVYIKL-VKKGGSRTPMAHPVQLSLQDATSPVMEELITFHDHAFMAMSLISFLVLYALLSTLTTKLTNTSITDAQEMETIWTILPAIILILIALPSLRILYLTDEVNDPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHAYHMVKPSPWPLTGALSAFLMTSGLVMWFHFYSTTLLMLGLLTITLTLYQWWRDIVRESTYQGHHTTPVQKSLRYGMTLFIISEVFFFIGFFWAFYHSSLAPTPCLGGHWPPTGITPLNPMEVPLLNTSVLLASGVTITWAHHNLMNNDRKQTIQALLITILLGTYFTLLQISEYFEAPFTISDGIYGSTFFMTTGFHGLHVIIGSTFLFICLIRQLLHHFTSNHHFGFEAAAWYWHFVDVVWLLLYISVYWWGS--MIPMRKSNPIMKMINRSFIDLPTPPNLSMWWNFGSLLAACLVLQIITGLLLAMHYSPDTSSAFSSIAHITRDVKYGWVTRYLHANGASMLFICLFLHIGRGLYYGSYLLLETWNIGIMLLLMTMTTAFMGYVLPWGQMSFWGATVITNLLSAIPYFGTNLVQWVWGGYAIDSPTLTRFFTLHFILPFIIIALTTVHLLFLHETGSNNPCGISSDSDKIAFHPYYTTKDILGLVLLLFILATLTLLSPNLLNDPDNYIPADPLNTPPHIKPEWYFLFAYTILRSIPNKLGGVLALFLSILILAAIPMLHKSKQQSMMFRPLSQFLFWLLMTILLTLTWIGSEPVTQPLTTIGQVASMMYFITILILMPLASLIENNLL---KWT-------MT--------TMNLLLMIMPTLAAMAFLTLVERKLLGHMQLRKGPNIVGPCGLLQPFADAVKLFTKEPLKPATSTTTLYIVAPALAFFIALLLWTPLPMPNALINFNLGLLFTLAMLSLIVYSILWSGWASNSNYALIGALRAVAQTISYEVTLTIILLSVLLMSGSFNLNTLITTQEHLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALLFMAEYMNIIMMNALTTTIFLGTFHSIHSPELFTTCFATKTLLLTSLFLWVRAAYPRFRYDQLMHLLWKNFLPLTLALLMWSTSTPIAISSI-P-PQT--MNP-LAQLIIYTTMITGTLITTLSSHWFLAWAGLEMNMLAFIPILMKKTSLR-STEAATKYFLMQSTASMILMMAIISNNLLSGCW--TTTNYISQPPSLMMTTALAMKLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMHQIHPSINIHILLTL-STLSIAVGSWGGLNQTQLRKILGYSSITHMGWMMMTLVYNPTTTILYLTVYIILTTTMFLTLNLSSSTTTLML---SRTWNKSTHLAPLMAPILMSLGGLPPLTGFLPKWIIIQELTMNNNFLIPSIMTIMTLLNLYFYMRLIYTTSLTLFPTSNNTKMTW-QLENTKPTLLI-------PPLIIISTLLLPISPLLLTFH---MN-LVLALTINTLLTSLLMIIMFWLPQLNPYTEKTSPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWAIQTTNLPMMIKSTIAFIIILILSLAYEWTQKG--LDWAE-MTLTYMNIMLAFTISLLGMLTYRSHLVASLLCLEGMMMSLFIMAALIASNTHFPLINIMPIILLVFAACETAVGLALLISISNTYGLDYVHNLNLLQCMLKMIIPTTMLLPMTWLSKNNTIWINLTMHSLTISLIPL-LFFNQINTNLLSHS-SYLSSDPLTTPLLALTIWLLPLMIMASQYHLCNEPPLQKKLFLFMTILLQITLILTFMTTELIMFYILFETTLIPTLIIITKWGNQAKRLNASTYFLFYTLTGSLPLLIMLSHTYNNTGSLNITLLTLTDQKLT-TTW-----SHNFTWLACMMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTPILNP-LTEYMAYPFLMLSLWGMIMTS--LTCLRQTDLKSLIAYSSVSHMALVIVASLIQTPWSFSGATILMIAHGLTSSMYFCLANSNYERTHNRTMLLSRGLQILLPLTAFWWLTASLTNLALPPTINLLGELFVIATSFSWSHITIMLTGLNMLITALYSLHMFTTTQRGALTHHMINMKPPFTRENMLMFMHLAPIILLSLNPNIILGFTS------MIMHTPI-IMTTLISLTLPIFAT---LINPYKK-RPYPDYVKTT-VMYAFIISLPSTTLFIFSNQETTIWSWHWMMTQTLDLTLSFKLDYFSMMFIPIALFITWSIMEFSLWYMNSDPNINQFFKYLLIFLTAMLILVTANNLFQFFIGWEGVGIMSFLLISWWYARTDANTAAIQAILYNRIGDIGLILAMVWFLLHCNSWDLQQMLALNFN-SNPLPLMGLLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMETNTMIQNLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMITIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSMIIGNLALTGMPFLTGFYSKDLIIEATNTSYTNAWALFITLITTS-LTSAYSTRTILLTLTGQPRFPALTSINENNPTLLNPIKRLTMGSMITGFLITNNIPPTSLPQPAMPLYLKLSALCATALGFLAALDLTLMTNKLK--MKNPSQMFKFSNMLGYFPTTIHRTIPYQNLLMSQNLALLLLDSTWLEKSMPKIISQAHTTASM--TVTTQKGMIKLYSLS---FLIPL--TLALILMM----------------- +>Loris_tardigradus_slender_loris +----MDQNLFAPFITPT-MMGMPIVIFIIMFPLMLFSNPT-RLINNRVTSMQQWLIHLTLKQLMSTHNTKGQTWSLMLISLIMFIGSTNFLGLLPHTFTPTTQLSMNLGMAIPLWAATVITGFRHKTKATLAHFLPQGTPPPLIPMLVLIETISLMIQPLALAVRLTANITAGHLLMHLIGSATLVLSS-ISMTTASITFTILIMLSILELAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTILSMT-LTLFMLLQLKLSKFLYPL-HPTQK-FTKTYYQ-INP-W-EKKWTKTYLP-HS-LPPQ----MFVNRWLYSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVESGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVSFYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDQTWAKIHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNSISSIGSFISLTAVMLMIFMVWEAFASKREVLMVELTNTNLEWLHGCPPPYHTFEEPTYVKA----------MAHPVQFGFQDAASPIMEELLYFHDHTLMIVFMISSLVLYIISLMLSTELTHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEINTPSLTLKTMGHQWYWSYEYTDYDKLCFDSYMVPTPDLEPGDLRLLEVDNRVVLPTEMSIRMLISSEDVLHSWTVPAMGIKTDAIPGRLNQATIMTSRPGIYYGQCSEICGSNHSFMPIVLELVPLKYFEEWLLKTL----------MTHQTHTYHMVNPSPWPLTGAISALLMTSGLIMWFHFNSTTLLTLGLLTNTLTMIQWWRDIIREGTFQGHHTPMVQKGLRYGMVLFIVSEVFFFAGFFWSFYHSSLAPTPELGGCWPPTGINPLNPLDVPLLNTAVLLASGVSITWAHHSLMEGNRKNMIQALSITITLGIYFTLLQASEYLETSFTMSDGVYGSTFFMATGFHGLHVIIGSTFLSTCLIRQLNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLTKIINHSFIDLPTPSNISSWWNFGSLLGLCLVIQIMTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWMIRYLHANGASMFFMCLFIHIGRGIYYGSFTFLETWNIGIMLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITTLTAIHLLFLHESGSNNPSGMTSDSDKIPFHPYYTLKDILGVIALLITLSTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALISSILILALMPFLNMAKQRSMMFRPLSQCLFWTLVANLMVLTWIGGQPVENPFIIIGQLASIMYFLTILIFMPLTNLLENKLL---KW--------MF--------MLNLLLLIIPIILAMAFLTLLERKTLGYMQLRKGPNIVGPNGLLQPFADAMKLFIKEPLKPLTSSTLLYMIAPTLALSIALIMWTPLPIPHPLININLGILFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILMMSGSFTLSTLIKTQEHLWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTATIFMSAIHNTHFTELFSASFTLKTLLLTTAFLWVRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHAAMPIFLANI-P-PQT--MKP-PILMLIIYTLFTGTILTMISSHWLMTWVGLEMNMLAITPILIQKAMPR-STEAATKYFLTQATASMILMMAIVINMMHSGQW--TMTKTSHPLTSLMILLALVIKLGMAPFHFWMPEVTQGVSLTSGMILLTWQKLAPFSILLQMNQSMNPNITLSI-AMMSIIIGGWGGLNQTQLRKILAFSSISHMGWMIAILTFNPSTTMLNLLIYLVLTMSMFIMLLSNSSTTTLTM---SHLWNKTPMLISTFLMTLLSLGGLPPLSGFIPKWIIIQELSKNYNIILPTMMAIMSLLNLFFYMRLVYSSSLTMFPTSNNLKLKW-QLNTPKPHTMT-------SPLITLSSMLLPLSPMISILN---MN-TAIALTTNTMLALMLVLVAFWLPQLNIYAEKHSPYECGFDPLDSARLPFSMKFFLVAITFLLFDLEIALLLPLPWALHTNTLNLMLSMTLLLILILAMGLAYEWTQNG--LEWQE-MSLISTNIILAFITALMGVLIYRSHLMSSLLCLEGMMLSMFILVSLTTLNLHFTLSNIAPIILLVFAACEAAVGLALLVMVSNTYGMDYIQNLNLLQCMLKIMIPTIMLYPVTWLSHYKTLWISATAYSLMISPISL-HLLHQPINY-LNFS-TTNFSDTLSTPLLILTTWLLPLMIMASQHHLYKEPLMRKKLYISMLISLQMLLIMTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLLGSLPLLVTLIYTQNFLGSLNLHILPLFNQNMSLNSW-----SNNLTWIACMVAFMVKMPLYGTHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITTILHP-LTNSMSYPFLILSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMMFCLANSNYERIHSRTMILARGLQTLLPLMALWWLAASLTNLALPPSINLIGELMIMITSFAWSKLSIVLTGLNTLITALYSLYMFTMTQHGKYTFHNNNIKPSFTRENTLMSLHILPLLSLSLNPKLILGPTL------MNTMMSTTTLTSLIILTLPIMLS---LTNNHNK-INFPSLVKSS-ISYAFFISLISALMFMYSNQDSTITNWHWITTQTLNLSTSLKLDYFSILFMPVALFVTWSIMEFSMWYMNSDPQMNKFFKYLLMFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILFNRIGDIGFILSMVWFLLNLNSWEIQQMLVLYPN-TNTLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNKTIQTLTLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSSSLMIGSLALTGIPFLTGFYSKDLIIETANTSSTNAWALLMTLIATS-LTAAYSTRIIFFALMGQPRFPSTSLFNESNPQLTNPIKRLAIGSILAGYLISNNIPPSSIPQMTMPLYLKMTAMTVTILGFSMAMEINLIATNLK--FPHTQKPYIFSSSLGFFPTTLHRLLPNTNLKSSQNMSSTLLDLIWLEKSMPKNLAQVNLLASK--TISNQKGLIKLYFLS---LLTTI--LITFTLMI----------------- +>Macaca_arctoides_stump-tailed_macaque +----MNENLFAPFSAPT-ILNQPATIPIILLPTLLVLTSK-HPINNRLTTIQQNLTQFTLKQMMKTHNAKGQTWSLMLMSLITFIAMTNLLGLLPYSFTPTTQLSMNLAMAIPLWTGTVVVGLRFKTKNSLAHLLPQGTPTPLIPMLVAIETISLLIQPVALAVRLTANITAGHLLIHLSGNAVLALST-INPSMTLLISTLLVLLTVLEIAVALIQAYVFTLLISLYLRNNTMPQLDTSTWFTTIMTML-PTLYPIMQLKLLNTNHYQ-PPLTK-NPSLQSH-NNY-W-QPKWTKTCLP-LS-QPQQ----MLTNRWLFSTNHKDIGTLYLLFGAWAGIMGTALSLLIRAELGQPGNLLGNDHIYNVIVTTHAFVMIFFTVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASAVVEAGAGTGWTVYPPLAGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGMVSHIVAYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFMHWFPLFSGYTLNQTYAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSFISLVAMILMIYMIWEAFASKRKVLLIEQPLTNLEWLNGCPPPYHTFEEPAYIKL-NEKGESRTPMAHPVQLSLQDATSPIMEELITFHDHAFMAMSLISFLVLYALLSTLTTKLTNTNITNAQEMETIWTILPAIILILIALPSLRILYLTDEVNDPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHAYHMVKPSPWPLTGALSAFLMTSGLVTWFHFYSTTLLMLGLLTNMLTLYQWWRDIVRESTYQGHHTVSVQKSLRYGMTLFIISEVFFFIGFFWAFYHSSLAPTPCLGNHWPPTGITPLNPMEVPLLNTSVLLASGVTVTWAHHSLMNNNRKQTIQALLITILLGTYFTLLQISEYFEAPFTISDGIYGSTFFITTGFHGLHVIIGSTFLFICLIRQLLYHFTSNHHFGFEAAAWYWHFVDVIWLLLYISIYWWGS--MTPMRKSNPIMKMINRSLIDLPTPSNLSMWWNFGSLLTACLILQIVTGLLLAMHYSPDTSSAFSSIAHITRDVKYGWTTRYLHANGASMLFICLFLHIGRGLYYGSYLLLETWNIGIMLLLLTMTTAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTNLVQWVWGGYAIDSPTLTRFFTLHFILPFITIALTAVHLLFLHETGSNNPCGISSNSDKIAFHPYYTIKDILGLVLLLFILATLTLLSPNLLNDPDNYIPADPLNTPPHIKPEWYFLFAYTILRSIPNKLGGVLALFLSILILAAIPMLHKSKQQSMMFRPLSQFLFWLLITILLTLTWIGSEPVTQPLTTIGQAASMMYFITILILMPLASLIENSLL---KWT-------MI--------TVNLLLMIMSTLAAMAFLTLVERKLLGYMQLRKGPNVVGPYGLLQPFADAVKLFTKEPLKPATSTTILYIIAPALAFFITLLLWTPLPMPNALINFNLGLLFILAMLSLIVYSILWSGWASNSNYALIGALRAVAQTISYEVTLTIILLSVLLMSGSFNLSTLITTQEHLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTTTIFLGTFYPTHSPELFTMCFTTKTLFLTSLFLWIRAAYPRFRYDQLMHLLWKNFLPLTLALLMWSTSTPIAISSI-P-PQT--MNP-PAQLTIYTTMITGTFITMLSSHWFLTWTGLEMNMLAFIPILMKKTSLR-STEAAIKYFLMQSTASMILMMAIISNNLLSGCW--TTTSYISQPPSLMMTTALAMKLGMAPFHFWVPEVTQGTPLISGLLLITWQKLAPISIMYQIHPSINTHILLTL-STLSIAVGSWGGLNQTQLRKILGYSSITHMGWMMMTLVYNPTTTILYLTIYIILTTTTFLTLNLSSSTTTLML---SRTWNKSTHLAPLMAPILMSLGGLPPLTGFLPKWIIIQELTMNNNFLIPSIMTTMTLLNLYFYMRLIYATSLTLFPTSNNTKMTW-QLENTKPMLLI-------PPLIITSTLLLPISPLLLTFH---MN-LVLVLTINTLLTSLLMIIMFWLPQLNSYTEKTSPYECGFDPLNPARIPFSMKFFLIAITFLLFDLEIALLLSLPWAIQTTNLPMMIKSTTTFIIILILSLAYEWTQKG--LDWAE-MTPTYMNIMLAFTISLLGMLIYRSHLVASLLCLEGMMMSLFIMTALIASNTHSPLINIMPIILLVFAACEAAVGLALLISISNTYGLDYVHNLSLLQCMLKMVIPTTMLLPMTWLSKNNTIWINLTMHSLAISLIPL-LFFNQTNTNLLNHS-THLSSDPLTTPLLTLTIWLLPLMIMASQYHLCNEPPSKKKLFLLMTILLQITLILTFMATELIMFYILFETTLIPTLVVITKWGSQEKRLNASTYFLFYTLTGSLPLLIMLSHTYNNTGSLNITLLTLTDQKLT-TTW-----SHGFAWLACMMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTPILNP-LTEYMAYPFLMLSLWGMIMTS--LTCLRQTDLKSLIAYSSVSHMALVIVASLIQTPWSFSGATILMIAHGLTSSMYFCLANSNYERTHSRTMLLSRGLQILLPLTAFWWFAASLTNLALPPTINLLGELFVIATSFSWSYTTIMLTGLNMLITALYSLHMFITTQRGALTHHMVNMKPPFTRENMLMFMHLAPIILLSLNPNIILGFTS------MIMHTTI-MMTTLISLTLPILAT---LISPCKK-RPYPDYVKTT-VMYAFIISLSSTTLFIFSNQETTIWSWHWMMTQTLNLTLSFKLDYFSMMFIPIALFITWSIMEFSLWYMNPDPNINQFFKYLLIFLTAMLTLVTANNLFQFFIGWEGVGIMSFLLISWWHARTDANTAAVQAILYNRIGDIGLILAMTWFLLHYNSWDLQQMLALNSN-PSPLPLAGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMETNTTIQNLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSMIIGNLALTGMPFLTGFYSKDLIIEATNTSYTNAWALFTTIIATS-LTSAYSTRTILLTLTGQPRFPALTNINENNPALLNPIKRLTMGSMVAGFLITSNVPPTSPPQPAMPLYLKLSALCATTLGFLAALDLILMTNKLK--TKNPSQMFKFSNMLGYFPTTIHRMIPYQNLLMSQNLALLLLDSTWLEKSMPKMISQAHIAAST--TVTTQKGMIKLYSLS---FLIPL--ILALILMM----------------- +>Macaca_fascicularis_crab-eating_macaque +----MNENLFTPFSTPT-ILNQPATIPIILFPATLVLTSK-HPINNRLATIQQNLIQLTLKQMMMTHNAKGQTWSLMLTSLITFIAMTNLLGLLPYSFTPTTQLSMNLAMAIPLWAGTVMVGLRFKTKNSLAHLLPQGTPTPLIPMLVVIETISLLIQPVALAVRLTANITAGHLLMHLIGNAALALST-ANFSLTLLTSTLLTLLTILEIAVALIQAYVFTLLVSLYLHNNTMPQLDTSTWFTTIMTML-PTLYLITQLKLLNTNHYQ-PPPTK-NSNLQSH-GIR-W-QPKWTKTCLP-LS-QPQQS---MLIDRWLFSTNHKDIGTLYLLFGAWAGVMGTALSLLIRAELGQPGSLLGNDHIYNVIVTAHAFVMIFFTVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLIASAVVEAGAGTGWTVYPPLAGNFSHPGASVDLIIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGMVSHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFMHWFPLFSGYTLNQTCAKAHFIIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSFISLVAVILMIYMIWEAFALKRKVLLIEQPLTSLEWLNGCPPPYHTFEEPTYIKL----------MAHPVQLSLQDTTSPIMEELITFHDHAFMAMSLISFLVLYALLSTLTTKLTNTNITDAQEMETIWTILPAIILILIALPSLRILYLTDEVNDPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTVFTATRPGAYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVLTL----------MTHQTHAYHMVKPSPWPLTGALSAFLMTSGLAMWFHFYSITLLTLGLLTNMLTLYQWWRDIVRESTYQGHHTMPVQKSLRYGMTLFIISEAFFFIGFFWAFYHSSLAPTPCLGGHWPPTGITPLNPMEVPLLNISVLLASGVTITWAHHSLMNNNRKQTIQALLITILLGTYFTLLQASEYFEAPFTISDGIYGSTFFITTGFHGLHVIIGSTFLFICLIRQLLYHFTSNHHFGFEAAAWYWHFVDVIWLLLYISIYRWGS--MTPMRKSNPIMKTINHSLIDLPTPPNLSMWWNFGSLLTACLTLQIITGLLLAMHYSPDTSSAFSSIAHITRDVNYGWITRYLHANGASMLFICLFLHIGRGLYYGSYLLLETWNIGIVLLLMTMTTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWIWGGYAIDSPTLTRFFTLHFILPFIIIALAVVHLLFLHETGSNNPCGISSDSDKIAFHPYYTIKDILGLILLLFILATLTLLSPNLLNDPDNYTPADPLNTPPHIKPEWYFLFAYTILRSIPNKLGGVLALFLSIFILAAIPMLHKSKQQSMMFRPLSQFLFWLLITILLTLTWIGSQPVTQPLITIGQVASMMYFITILILMPLASLIENNLL---KWT-------MT--------TVNLLLMVMPTLAAMAFLTLVERKLLGYMQLRKGPNVVGPFGLLQPFADAMKLFTKEPLKPSTSATTLYIIAPALAFFITLLLWTPLPMPNALINLNLGLLFTLAMLSLIVYSILWSGWASNSNYALIGALRAVAQTISYEVALTIILLSVLLMSGSFNLSTLITTQEHLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYTNIIMMNALTTTIFLGTFYPTYSPELFTACFTTKTLFLTSLFLWVRATYPRFRYDQLMHLLWKNFLPLTLALLMWSTSTLIAISSI-P-PQT--MNP-LAQPIIYTTMITGTLITTLSSHWFLAWVGLEMNMLAFIPILMKKTNPR-STEAAIKYFLMQSTASMVLMMAIISNNLLSGCW--TTTSYINQPPSLMMMTALAMKLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQIHPSINIHILLTL-STLSTAMGSWGGLNQTQLRKILGYSSITHMGWMMMTLVYNPMTTIFYLTIYIILTTTMFLTLNLSSSTTTLML---SRTWNKSTHLAPLMAPILMSLGGLPPLTGFLPKWIIIQELTMNNSFLIPSIMTIMTLLNLYFYMRLIYTTSLTLFPTSNNTKMTW-QLENTKPMPLI-------PPLIITSTLLLPISPLLLTFH---MN-LVLALTVNTLLTSLLMIIMFWLPQLNSYAEKTSPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWAIQTTNLPTMIKSTIAFIIILILSLAYEWTQKG--LDWAE-MTPTYMNIMLAFTISLLGMLTYRSHLVASLLCLEGMMMSLFIMTTLIASNMHFPLINIMPIILLVFAACETAVGLALLISISNTYGLDYVHNLNLLQCMLKMIIPTTMLLPMTWLSKNDTIWINLTMHSLAISLIPL-LFLNQTNTNLLNHS-TYLSSDPLTTPLLMLTAWLLALMITASQYHLHNESPPRKKFYLSMMVFLQISLIFTFMATELIMFYILFETTLIPTLIIITRWGSQAERLNPGMYFLFYTLAGSVPLLIMLIYAYNNLGSLNITLLTLVAQKLT-TTW-----SHSLTWLTCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLATVLLKLGGYGMMWLTSILSL-TTEYMTYPFLMLSLWGMIMTS--STCLRQTDLKSLIAYSSVSHMALVIVASLIQTPWSFSGATVLMIAHGLTSSMYFCLANSNYERTHSRTMLLSRGLQILLPLMAFWWLAASLTNLALPPTINLLGELFVITTSFSWSHITIVLTGLNMLITALYSLHMFITMQRGTLTHHMINMKPPFTRENMLMFMHLAPIILLSLNPNIILGFTS------MIMHTPI-MMTTLISLTLPIFAT---LINPYKK-RSYPDYVKTT-VMCAFITSLPSTTLFILLNQETTIWSWHWMMTQTLDLTLSFKLDYFSMMFIPIALFITWSIMEFSLWYMNSDPNINQFFKYLLIFLTAMLILVTANNLFQFFIGWEGVGIMSFLLISWWHARTDANTAAIQAILYNRIGDIGLILAMTWFLLHYNSWDLQQMLALNSN-SSSLPLVSLPLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVIAGVFLLIRFHPLMETNTMIQNLTLCLGATTTLFAAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSMIIGNLALTGMPFLTGFYSKDLIIEATNTSYTNAWALFITLIATS-LTSAYSTRTILLILTGQPRFPAMTNINENNPTLLNPIKRLTMGSMVTGFLITNNIPPTSPPQPMMPLYLKLSALCATALGFLAALDLTLMTNKLK--MKNPSQVFKFSNMLGYFPTTIHRTIPYQNLLMSQNLVLLLLDSTWLEKSMPKTISQAHITASM--TMTTQKGMIKLYSLS---FLIPL--TLALFLMM----------------- +>Lepilemur_ruficaudatus_red-tailed_sportive_lemur +----MNQNLFSSFITPT-IVGIPVVILIILTPSIFFPSPS-RLIDNRLTSLQQWLVQLMLKQLMATHNTKGRTWALMLISLILFISSTNLLGLLPHSFTPTTQLSMNLAMAIPLWAATIITGFRYKMKASLAHLLPQGTPTPLIPMLIIIETISLLIQPMALAVRLTANITAGHLLMHLIGGTTLVLTS-INPNISLITFIILVLLTVLELAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFVTISSMI-LTLFIIFQLKISKLNYPL-KLTSK-FLSNHNH-INP-W-ESKWTKIYSP-LL-LPQQL---MFINRWFYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVVNMKSPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNMISSIGSFISLTAVMLMVFMVWEAFASKREVLVVELTPTNLEWLHGCPPPYHTFEEPAYVNM-A-KKG----MAHPVQLGFQDAASPIMEELLYFHDHTLMIVFLISSLVLYIISLMLSTKLTHTSTVDAQEVETVWTILPAVILILIALPSLRILYMMDEITTPSLTLKTMGHQWYWSYEYTDYENLYFDSYMVPLSDLKPGDLRLLEVDNRVALPTEMSIRMLVSSEDVLHSWAVPSLGVKTDAIPGRLNQITLMTSRPGIYYGQCSEICGANHSFMPIVLELVSLKYFEEWLLNML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLITWFHFNSNYLLSLGLLTNLLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGSCWPPTGIHPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGNRTYTLQALLTTILLGIYFTLLQTSEYFETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLTICFFRQMKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKNHPLMKIINSSFIDLPTPPNISSLWNFGSLLGACLTIQIITGLFLAMHYTADTTTAFSSVTHICRDVNYGWTIRYLHANGASMFFLCLFIHVGRGLYYGSFALLETWNIGIILLFSVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVGKPTLTRFFALHFILPFIISALTMIHLLFLHETGSNNPLGVSSNSDKIPFHPYYTTKDFLGLLLLILLLMALTLFYPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALILSILILVIIPFLQPNKQQTMMFRPLSQFLFWILVADLVTLTWIGGQPVENPFISIGQMASILYFSLMAFIMPLTCLIENKML---KW--------MF--------AANLLLLIIPIIVAMAFFTLVERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPMPMPFPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMNGSFTLSTLITTQEYLWLVIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYKPNMPETYTTNFHYKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFPPLTLALCMWYISLPILMSYI-P-PQM--MNP-ITLLLIMITIFAGTLLTMVSSHWLLMWIGLEINMLAIIPILMKNYKPR-STEAATKYFLMQATASMLLMFTIVLNATYSGQW--NITNTHNQFTPITITIALSMKLGVTPFHFWVPEVTQGISLLAGMLLLTWQKLAPISIMLQVHPWMNLNILLLV-ALLSILVGGWGGLNQTQLRKILAYSSIAHMGWMVGILMFCPSLTMLNLLIYLALTIIMFTILNLNTSTTVLTL---SNLWNKTPMIALTTMIALLSLGGLPPLTGFLPKWMIIQELSKNNNIIMVMIMTIMALLNLYFYMRLIYSTFLTLFPTFNNMKMKW-QFQTMNQTRLM-------PPLIILSTLSLPLAPTFSTLY---MN-LPLALAMNTLMVMILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNLKLMLATALALISILAAGLAYEWFQKG--LEWEE-MPSIFTNVTLAFTMALMGMLVFRSHLMSSLLCLEGMMLSMFILSTLFTMSLHFTVSFIMPILLLVLAACEAAIGLALLVMVSNTYGLDHVQNLNLLQCMLKIIIPTIMLLPMTWYSTNPMVWINITLHSLTISFTSL-SLLNQTDNNSNNFS-STFFSDPLSSPLLTLAMWLFPLTIMASQYHLAKESLERKKHFLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTYWTQELA-DSW-----SNDLMWVACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNP-LTKFMAYPFLMVCLWGMVMTS--LICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFSWSNMTIILTGLNMLITATYSLYMLTMTQRGEPPYHAHNFNPSLTRENTLMSMHVFPLLLLTLNPKILMGPTY------MNLFSSF-TLITLVILMYPIMTN---LMNIHKN-TPYTLHVKLI-TTYAFFTSLIPATLFTFSQQETIVSNWHWMTIQTLKLTISLKMDYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAIIYNRIGDIGFILSMAWFLMHSNTWDLQQMFMLNHN-PNLVPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTEINNTVRTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKIMPFTTSSLIIGSLALTGMPFLTGFYSKDLIIETMNMSNANAWALTITLIATS-LTAVYSTRIIFYVLMKQPRFTASSMINENNPLLINSIKRLAIGSIFAGFLLSNNILPMTTPQMTMPTYLKSMALAVTILGFTLAMELTLTTNNLK--LKSPSQVLKFSNMLGFFPNITHRSTPLYKLITSQNMASLLLDLIWLEKSMPKNMSQLQLLFSK--TISNQKGLIKLYFLS---SLMST--LLALLLII----------------- +>Inia_geoffrensis_boutu +----MNENLFAPFTAPM-MLGIPMTPLIIMLPIMLFPMPD-RLINNRLISIQQWTTKLLLKQLMKMHNPKGQTWALMLTTLILFIASTNLLGMLPYSFTPTAQLSMNLGMAIPLWAGAVSMGFRNKTKMSLAHFLPQGTPTLLIPMLVIIETISLFIQPMALAVRLTANITAGHLLLHLIGSATLALTK-ISLLMTPITFTILTLLTILEFAVALIQAYVFTLLVSLYMHDNTMPQLNTSTWLLTISPML-LTLFTLLQLKLSKHFYLP-SPKPT-LTELQKQ-KTP-W-NNTWTKIYLP-PS-QPL-----MFMDRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSMLIRAELGQPGTLIGDDQIYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMTSSVIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSILVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMVSHIVTYYSGKKEPFGYMGMVWAMISIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKIFSWLATLHGGNIKWSPALMWALGFIFSFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWAKIHFVVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVELTTTNLEWLNGCPPPYHTFEEPVYINL-KRS------MAYPLQLGLQDATSPVMEELLQFHDHALMVVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPALILILIALPSLRILYMMDEVNDPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQNLKPGELRLLEVDNRMVLPMQMTIRVLISSEDVLHSWAVPSLGLKTDAVPGRLNQTTLMSTRPGLFYGQCSEICGSNHSLMPIVLELVPLENFEKWSTSMT----------MTHQTHPYHMVNPSPWPLTGAFSALFMASGLTMWFHSNSVILLSLGLMTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIYPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHALQALFITITLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIICFIRHMKFHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKILNNALIDLPTPSNISSWWNFGSLLGLCLIIQILTGLFLAMHYTPDTLTAFSSVAHICRDVNYGWLIRYLHANGASMFFICLYIHIGRGLYYGSHTSQETWNIGVLLLLMVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSIDKATLTRFFALHFILPFIITALVTVHLLFLHETGSNNPTGIPSNMEKIPFHPYYTIKDILGALLLVSVLLTLTLFAPDLLGDPDNYTPANPLNTPTHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILIFIPMLQTAKQRSMMFRPLSQLLFWILLTDLLTLTWIGGQPVEHPYIIMGQLASILYFLLILVLMPIASLIENKLL---KW--------MF--------MVNTLMLTLPILMAVAFLTLVERKTLGYMQLRKGPNVVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFILAPGLALTLALTMWTPLPMPHSLVDMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLATTQEQMWLILPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLSPSHNPHTPELYTMNLIAKTLLLTMVFLWIRASYPRFRYDQLMHLLWKSFLPLTLAFCMWHISLPIMTASI-P-PQT--MNP-LIFTILLMTLILSTMIVITSSHWLFAWIGLEINTMAIIPIMMKTPSPR-ATEASTKYFLTQATASALLMLAITINLMHSGQW--TIMKLIDPTASILMTTALAIKLGLSPFHFWVPEVTQGVPLTTGLILLTWQKIAPISILYQISSSINLHLMLLL-SLLSILIGGWGGLNQTQLRKMMAYSSIAHMGWMTTILVYNPTLTLLNLMIYMTMTFTMFMLLIQNSATNLLTL---SQTWNMTPITTTLIMLTLLSMGGLPPLTGFVPKWIIIQELTKNNTIVLPTLMATMALLNLYFYMRLAYSTALTTLPSTNNMKMKW-QFHPTKRMTLL-------PTTTVLSTMLLPLTPTLLTLL---MN-LLLTLLTNTTLALLLMLMAFWFPQLNTYAEKISPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLKVMLTTALFLISLLAASLAYEWTQKG--LEWDK-MTLIHMNIFMAFTMSLTGFLMYRSHLMSALLCLEGMILSLFILVTLTVLNLHLTLAKMMPIILLVFAACEAAIGLALLVKISNTYGTDYVQNLNLLQCMLKFVIPTIMLMPLTWLSKNKFIWINTTTHSLLISFTSL-LMLNQTHTNTTNYS-LMFFSDSLSTPLLILTMWLLPLMLTASQLHLKKETPTRKKLYITMLIVLQTLLIMTFTATELILFYITFEATLIPTLIIITRWGNQAERLNAGLYFLFYTLMGSLPLLVALMYLQNTLGSLNFLLLQYWTKPLS-ISW-----SNMILWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTENMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAILIQTPWSHMGAVALMVAHGLTSSVLFCLANSNYERTHSRTMILARGLQILLPLMATWWLLAGLMNLALPPTINLVGELLVITSTFSWSKPTIILMGMNIVITALYSLYMLIMTQRGKNTPHINNLIPSSTREHALMALHIIPLLLLSLKPQIILGPLY------MNLLIPL-TLLTLLTLITPIMMS---TTDIYKS-NKYLHYAKNM-TLYAFITSLIPMMVFMYTNQETLISNWHWTTIQTLKLTLSFKLDYFSLTFMPVSLFITWSIMEFSTWYMSSDPHINQFMKYLLIFLTTMLILVTANNLFQLFIGWEGVGIMSFLLISWWFGRTDANTAALQAILYNRIGDIGLLTSMAWFLVNTNTWDLQQMITLNLN-TPNLPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKPIQTMILTLGALTTLFTALCALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPHLAFLHICMHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALITGCLALTGMPFLTGFYSKDLIIETATSSYTNAWALLLTLITTS-LTAMYSTRIIFFTLLGQPRFPPLMNINETNPMLINSIKRLLTGSIFTGFFLLNSLPPMITPVTTTPLYLKLTALIMTISGFILAFDINTFTQNLK--HPHPSNFTNFSALLGYFPTIMHRLPPHLGLTMSQKLATSLLDLAWTETILPKTVALAQLKAST--LISNQKGLIKLYFLT---LLITI--ILTMAML----------NHPE---- +>Rhinolophus_pumilus_Okinawa_least_horseshoe_bat +----MNENLFASFITPT-MMGLPIVILIIMFPTILFPSTN-RLISNRLVAIQQWLIHLTSKQMMAIHNPKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALLS-ISTATAFITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-LTLFIMMQLKVSKHSFHS-NPEPL-EVKSSKH-TTP-W-ETKWTKIYSP-LS-LPQR----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLDSTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVILMVFMVWEAFASKREVSTVELTTTNLEWMHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTSLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKHFEKWSSSMV----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSSLLLTIGLLANMLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRSHMLQALFITIFLGLYFTLLQASEYHETSFTIADGVYGSTFFMATGFHGLHVIIGSTFLVVCFLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLFKIINDSFIDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWVLRYLHANGASMFFICLFLHVGRGIYYGSYTFSETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSVDKATLTRFFALHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSDVDMIPFHPYYTIKDILGLVLMLMALLSLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPLASIAENHLL---KW--------MF--------MINLLLLIVPILLAVAFLTLIERKVLGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSISMFIIAPVLALTLALTMWTPLPMPHPLINLNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLLSGSFSLSTLITTQEHVWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNIFTTTLFLGAFHNPLMPELYTANFVLKSLLLTVSFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVAMPVITAGI-P-PQM--MNP-LIFATISSTIILGTLIVMTSSHWLLVWIGFEMNMLAIIPMMMKRSNPR-STEASTKYFLTQATASMLLMLAIIINLLHSGQW--TVTNILSPTASTIMTLALTMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLSILYQISHSINLDILLTM-SILSILIGGWGGLNQTQLRKILAYSSIAHMGWMTAIMIYNPTMALLNLILYILMTATTFMLFMTNSSTTTLSL---SHLWNKMPLLTASILAIMLSLGGLPPLTGFLPKWMIIQELTKNDIIILPTLMAITALLNLFFYMRLTYTTSLTMFPSTNNMKIKW-QFESTKWTTYL-------SPMIILSTLTLPLAPMLSTLN---MN-FMLTLLTNTLLALLLVTIAFWLPQTNVYSEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQANNLEVMLTTALLLISLLAISLAYEWSQKG--LEWTE-MALIYTNTLLAFTISLLGLLLYRSHLMSSLLCLEGMMLSMFVMVAVMILNTHLTTSSMMPIVLLVFAACEAALGLSLLVMVSNTYGIDHVQNLNLLQCMLKIIIPTTMLIPLVWLSKHTMIWINPTVYSLMISLLSL-PMLNQFTDNSLNSS-LVFFSDSLSTPLLMLTTWLLPLMLIASQHHLANESLNQKKLFMTMLILLQVFLIMTFTATELILFYILFEATLLPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTTGTLNFLLSTYWLQPLS-PSW-----SNAFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMLLNP-VTDFMAYPFLILSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTILPLMAAWWLLASLTNLALPPTINLIGELFVVMSTFSWSSMSIILMGTNIVITALYSLYMLITTQRGKHTYHINNLTPSFTRENTLMTMHLMPLLLLSINPKIILGTLY------MNLFTPL-ILISLLILTIPIITA---TLNLHKT-NAYPYYVKTT-IIWAFMISLIPTMMFIQSGQEVILMNWHWVSIQTLKISMSFKLDYFSMIFMPVALFVTWSIMEFSLWYMHLDPYIDRFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFLMAMAWFLFNTNTWDLQQIFSLSLD-NTDLPLAGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLIENNKTIQSVVLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLYNTLPFTTTALTVGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLITLIATS-LTAVYSTRIIFFALLGQPRFPTLILINENNPYLMNSIKRLLIGSIFAGFFITNTIPPMTVPQMTMPWYLKMTALAVTILGFTIATDLSLATQNLK--FKHPSASFKFSNMLGYFPTVMHRLMPKMNLSLSQKTASLLLDLTWMENALPKSISLVQMKTST--LVSSQKGQIKLYFLS---FLLTL--TLSLIML----------ILHE---- +>Echinosorex_gymnura_moonrat +----MNENLFTSFMIPM-FMGLPVFIIIIMFPSILFPSPS-RLINNRIITIQQWIVKITSKQMMSIHNQKGQTWTLLLMSLIMFIGSTNLLGLFPHSFTPTTQLSMNLGMAIPLWAGTVIMGFRFKTKASLAHFLPQGTPLALIPMLVLIETISLFIQPMALAVRLTANITAGHLLIHLIGSATLTLIS-ISPTAATFSFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFSTIIVMI-MTLFILFQLKFSTYNYIS-SPEIK-LINLTTH-KNS-W-ETKWTKIYLP-LL---------MFINRWLFSTNHKDIGTLYMIFGAWAGMAGTSLSLLIRAELGQPGALLGDDQIYNVVVTAHAFIMIFFMVMPIMLGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALTQYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSINWSPALMWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIGGFVHWFPLFSGYTLNLTWAKIQFIVMFMGVNITFFPQHFLGLAGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMILVFMVWEAFASKREVKTVELTTTNIEWLYGCPPPYHTFEEPAYIAR-K--------MAYPFELGLQDATSPIMEELLYFHDHTLMIVFLISTLVLYIISLMLTTKLTHTSTMDAQEVETIWTVLPAVILILIALPSLRILYMMDEINNPSLTIKTMGHQWYWSYEYSDYEDLCFDSYMIPSTDLNPGHLRLLEVDNRVILPTEMTVRILISSEDVLHSWAVPSMGLKTDAIPGRLNQTTMLATRPGLYYGQCSEICGANHSFMPIVLETVPFEVFEKWTYSMI----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSFTLLTLGILTNLLTVFQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGVWPPAGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNNTIQALAITIALGIYFTVLQAMEYYEAPFTISDGVYGSTFFMATGFHGFHVIIGTTFLLVCFMRQLFYHFTHKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNMRKTHPLIKIINNTFIDLPTPSNISSWWNFGSLLGLCLVIQIITGLFLAMHYSSDTMMAFSSVTHICRDVNYGWLIRSLHANGASMFFICLFIHVGRGLYYGSYMMVETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFILPFIITALAGVHLLFLHESGSNNPSGLNSDSDKIPFHPYYTIKDIFGVLFLLLILLTLTLFYPDLLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILILMPLLHTAKQRSMMFRPISQCMFWLLTADLLTLTWIGGQPVEHPYIIIGQLASILYFTIILCLLPIAGLLENYMM---NWK-------MF--------FINIICLIAPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLKPLTSSNTLFIMAPILALTLALSMWIPMPMPQSLLNLNLGLLFLLAMSSLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLTILLFSGSFSLLSLIITQESMWLIFPSWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIILMNTLTTLLFFSPTYYPDKPYLFTTNLIPKIIILTMLFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMLYISMSYTFSNI-P-PMT--MNP-VILTMAYFMIFMGSMIVFISSHWLVTWIGFEMNLMAMIPLMLVNKTPR-STEAATKYFITQASASMIFMFAVILNFMLYSQW--NMLMKLNPTSSLLLTMAMLMKLGMAPFHFWMPEVTQGVSLSTGMILLTWQKLAPLSIMYQILPSINYELIMTS-AIMSILIGGWGGLNQLQLRKIMAYSSISNMGWMMAVLTYNPTLMILNLTVYIIITLTMFMYLNSYNITTTSML---SQLWNINTTFTIMMSLILLSLGGLPPLTGFIPKWLIIQEMTKNNNIILPTFMAMLTLINLLFYTRLIYSSSMTLFPSTSSSKLKW-HYKTPKMNIMT-------PTLSTLSILLLPLSPMFIIFT---MN-FIISITTNFLLSTILIMVAFWLPQINLYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQNFNLNMAIFMALFLILLLASSLAYEWLNKG--LEWVE-MQMTMINMILAFIMATTGLLMFRSHFMSSLLCLEGMMLSIFILMSISTLNFNNSLAMMFPLVLLVFAACEAAIGLSLLVKISNTYGTDYVQNLNLLQCMLKILIPTFMLLPLTWFSPNKMIWINNSIYSMLICMISL-KFLYQYSQPNLNLS-LTFFTDALSTPLLILSTWLLPLMLIASQNHMKLESKYNKKLYISLMILLQIILIMTFSATEMIMFFIMFEATLIPTLMIITRWGNQPERLNAGTYFLFYTLTGSLPLLVALTYLQNYLGSLNFMLMLYWPNSLNMSSW-----TNPLLWLACMLAFLIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIVIMIQP-STEMLLYPFILLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVITAIMIQTPWSFMGATALMLAHGLTSSMLFCLANTNYERTHSRTMILARGLQSILPLMMLWWLMASLANLALPPTINLIGELMIITSMFSWSNMSIILLGLNMLLTSIYTLYMLITTQCGHMTTHTNSIYPSYTREHALMTLHILPLMLLSLNPKIILGTTF------MNYMSSL-FTLTMLLLLFPLILP---TNYILNS-YSYTKYIKNI-VASSFFISILPMTMFLMSNEDTIIINWHWINIHNMNLHMSFKLDYFSLLFIPVALYVTWSIMEFSMWYMHSDPNINKFMKYLLMFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWHGRSDANTAALQAILYNRIGDIGFLLAMIWYAINLNSWEMQQIFLLPTN--DIIPLMGLLLAAMGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHSTMYNYPSMQTMILCLGALTTLFSALCAITQNDIKKIVAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLMLVLPFTSSSLMIGSLALTGIPFLTGFYSKDLIIEFANTSYTNAWALTLTLIATS-LTAVYSTRIIFFSLMGQPRFTTSNLINENIPPMMNSIKRLLLGSIFAGFMLSSSITPVTIPQMTMPNYLKLTALIVTILGFTLAMELNTLTNNLK--HTSPSLVFSFSNSLGYYPTIIHRFPPLKNLNLAQKMATTRTDLTLLELFMPSYLCNIQITMSK--LISNQKGLMKLYFLT---FMFSI--MISLAIILPL------SN------- +>Episoriculus_caudatus_Hodgsons_brown-toothed_shrew +----MNENLFASFATPT-MMGLPIVMLIILFPSILFPNPT-RLINNRLVALQQWLIQLISKQMMAIHNQKGQTWTLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLMS-ISPVTAFITFIILVMLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFINILSML-LTLYIVFQLKVSKYLYPT-NPEPK-SLKTLKH-NNP-W-ETKWTKIYSP-LS-LPQQ----MFVTRWLFSTNHKDIGTLYMVFGAWAGMAGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMLGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGSINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIAAFVHWFPLFTGYTLSSTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNTVSSMGSFISLTAVVVMVFMVWEAFASKREVTSVELTTTNIEWLYGCPPPYHTFEEPVYVNA-K--------MAYPFQLGLQDATSPIMEELMNFHDHALMIVFLISTLVLYVISSMLTTKLTHTSTMDAQAVETIWTILPAIILILIALPSLRILYMMDEINNPTLTVKTVGHQWYWSYEYTDYDELNFDSYMVPTTDLKPGDLRLLEVDNRAVLPMEMTVRVLITSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICESNHSFMPIVLELVPLKVFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSTILLSLGLLTNTLTMYQWWRDVVREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTHELGGYWPPAGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQALFITIALGVYFTILQAAEYYEAPFTISDGIYGSTFFMATGFHGFHVIIGTTFLTVCFLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINSSFIDLPAPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMFLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVEWIWGGFSVDKATLTRFFAFHFILPFIVAALAGVHLLFLHETGSNNPSGLSSDADKIPFHPYYTIKDILGVLLLILALTSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIIPLLHTSKQRSMMFRPFSQCLFWILVADLITLTWIGGQPVEHPFIIIGQLASILYFLLILVLMPITSLLENNML---KW--------MF--------MINLLTMIVPVLLAVAFLTLIERKVLGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAVSSLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLITTQQFSWLLLSTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTSILFLGSLHMIHLPELYSINFTIKALLLTISFLWVRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSLPIFTSSI-P-PQT--MNP-IIMTIIISTIMLGTLIVLTSSHWFMIWVGFEMNMLAIIPILMKNYNPR-SMEASTKYFMTQATASMILMLAIIMNLLYSGQW--TINNITNPTASILMTIALVMKLGLSPFHFWVPEVTQGVSLTSGLILLTWQKIAPLSVLYQIYPSINLEMLLTM-SLLSVLVGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMIYNPTLMLLNLIIYITMTISTFMLFISTSSTTTLSL---SYTWNKTPLITALILTIMLSLGGLPPLTGFLPKWMIIQELTKNHSVILPTLMAVLSLLNLFFYMRLTYSTSLTMFPTSNNIKMKW-QHENTKQIPLM-------APMITISTLTLPLAPLLFTLH---MN-MMLALLTNTTLASILVVVAFWLPQLNIYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTQLNMMVTMALALISLLAMSLAYEWYQKG--LEWTE-MSLVHMNIGLAFTVAFLGLLMYRSHLMSSLLCLEGMMLTLFIMGAIMVLNMHFTLANMLPIILLVFAACEAAIGLSLLVMVSNTYGVDYVQNLNLLQCMLKIIMPTLMLIPLTWLSNKSFVWINTTAYAMLISLTTL-PLFNQPNNNEIYFS-TTFFSDSLSTPLLTLTTWLLPLMLMASQNHLMNETETRKKLYISMLITLQAFLIMTFSATELILFYILFEATLVPTLILITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNSSGTLNFTMLQLWAQNIQ-TSW-----SNNFLWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-ITETMAYPFLILSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMAAWWLLASLTNLALPPTINLIGEMFVMLASFSWSNITMLLTGINVVITALYSLYMLIMTQRGKYTHHVNSIKPTFTRENTLMILHIIPLLLLSLNPKLILGTLY------MNLYTST-LITSLSMLSLPVFMS---LLPIYKT-NQYPYYVKTI-ISYAFLTSLIPTLIFINSGHEAVISNWHWMTIQTIKLTMSFKLDYFSMLFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFLFNSNSWEFQQIFMLDSN-HNIIPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLIENNKTIQSLILCMGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFNALPFTTTSLIVGSLALTGTPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-LTAVYSTRIIYFSLLGQPRYSTLILINENNPLLINSIKRLLIGSIFAGFIISLNLTPMNVPQMTMPSYLKLTALTVTLMGFALALELNLMTQNLK--MSHPHNYYKFSNMLGYFPIVVHRLLPSNSLLMSQKLSSMLLDLTWMENILPKSISKFQASSSI--TVSNQKGLIKLYFLS---FLVTL--VISITLF----------NFHV---- +>Sus_verrucosus_Java_warty_pig +----MNENLFASFIAPT-MMGLPIVTLIIMFPSLLFPTPK-RLINNRTISIQQWLIQLTSKQMMAIHNQKGQTWSLMLMSLIMFIGSTNILGLLPHSFTPTTQLSMNLGMAIPLWSATVFTGFRHKTKASLAHFLPQGTPAPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALLN-ISTMTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFITITSMI-MTLFILFQLKISNYSYPA-SPESV-ELKTQKH-STP-W-EMKWTKIYLP-LS-LPLR----MFVNRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTMGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQAWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSAVELTSTNLEWLHGCPPPYHTFEEPTYINL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGEMRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPS--LKSGCYPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSTSMLTG--------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMLLLSLGLLTNTLTMYQWWRDIIRESTFQGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGDRKHMIQALSITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIINNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFIHVGRGLYYGSYMFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFVITALAAVHLLFLHETGSNNPTGIPSDMDKIPFHPYYTIKDILGALFMMLILLILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVTSILILILMPMLHTSKQRSMMFRPLSQCLFWMLVADLITLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPITSIIENNLL---KW--------MF--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADALKLFTKEPLRPATSSTSMFIIAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLITTQEHIWMIFTSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFMAEYANIIMMNAFTAILFLGAFHDPHTSELYTINFVLKTLALTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHISLPIMTASI-P-PQS--MNP-IIYTTLIMTVMSGTMLVMISSHWLLIWIGFEMNLLAMIPVLMKNFNPR-AMEAATKYFLTQATASMMLMMAIIINLLYSGQW--TITKMFNPVAMTMMTMALAMKLGLSPFHFWVPEVTQGISLQAGLLLLTWQKLAPLSVLCQISQSINPNLMLTM-AMLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNTTMTILNLLIYITMTLAMFMLLIHSSATTTLSL---SHTWNKMPIITSLMMVTLLSMGGLPPLSGFMPKWMIIQEMTKNESIIMPTLMAMTALLNLYFYMRLAYSSSLTMFPSTNNMKMKW-QFEHTKQMKLL-------PTMIVLSTLILPMTPALSSLN---MN-IMLTLFTNVTLASLLVLIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLKTMLTMALFLLTLLAASLAYEWTQKG--LEWTE-MPLVYMNIIVAFAIALAGLLMYRSHLMSSLLCLEGMMLSLFIMSTLIVLNTHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTTMLLPMTWMSKHNMIWINATVHSLLISLISL-SLLNQLGENSLNFS-LTFFSDSLSTPLLVLTTWLLPLMLMASQSHLSKETTTRKKLYITMLILLQLFLIMTFTATELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYIQNTTGSLNFLIIHYWSHPLS-NSW-----SNIFMWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTILNP-LTNYMAYPFLMLSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERVHSRTMILARGLQTLLPLMATWWLMASLTNLALPPSINLIGELFIITASFSWSNITIILMGMNMMITALYSLYMLIMTQRGKYTHHINNIKPSFTRENALMALHILPLLLLTLNPKMILGPLY------MNPFASL-TLTTLTILTIPIMMS---NSNIYKT-NLYPNYVKTT-VSYAFTLSLVPLLMFIHTGQEMIISNWHWMTLQTVELSLSFKMDYFSVMFIPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFVLSMAWFLSHSNAWDFQQIFMLNND-CPNMPLVGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMETNKLVQTMTLCLGAITTLFTALCAITQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICMHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLYKAMPFTTTALIIGSLALTGMPYLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-LTAAYSTRIIFFAFLGQPRFPPLVLINENNPLLINSIKRLLIGSIFAGFIISNNIPPMTVPNMTMPLYMKMTALIMTIMGFMLALELNNTTYYLK--FKYPSQTYKFSNMLGYYPSIMHRLPTYHNLSMSQKSASSLLDLIWLETILPKTTSYIQMKMSI--MVSNQKGLIKLYFLS---FLITI--MISMMLF----------NYHE---- +>Neodon_irene_Irenes_mountain_vole +----MNENLFASFITPT-MMGLPIVVLIIMLPSMLMTSSK-RLISNRLHLFQQWLVKLIIKQMMLIHSPKGRTWSLMLVSLIMFIGSTNLLGLLPHTFTPTTQLSTNLGMAIPLWAGAVILGFRHKLKASLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLTS-ISPPTATITFIILALLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITVLSTT-ITLFILMQLKISLHNFPH-TPSVK-SIKLTKT-DNP-W-ESKWTKIYSP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLDDMWAKTHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLIMVFMIWEAFASKREVLSVEHTSTNLEWLHGCPPPYHTFEEPTFVKV-K--------MAYPSQLGLQDASSPIMEELMNFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLCFDSYMVPTSELKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKNFENWSLSMI----------MTHQTHAFHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSAILLSLGLLGNSLTMYQWWRDVIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNNMNQALFITIMLGVYFTILQASEYFETPFSISDGIYGSTFFMATGFHGLHVIIGSTFLIICLLRQLKYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTVIRKKHPLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLIIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGVYYGSYNMIETWNMGIIFLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVLVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDFLGVLILLMVLMILALFFPDVLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPLLHTSKQRTLTFRPITQTMYWILVADLFILTWIGGQPVEYPFIAIGQTASIAYFTIIVIFMPIAGMIENNIL---DLD-------MH--------FMNILMLLVPVLIAMAFLTLVERKILGYMQLRKGPNIVGPYGVLQPFADAMKLFIKEPLRPLATSTTLFIIAPTLSLSLALSLWIPLPMPYPLINLNLGILFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMSGSFSIQSLIYTQEPLWLLVPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIILMNALSTIVFMGPLHDLINPELYTTNFMLKTLALTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCTWHISTPIFMASI-P-PYT--MNP-ITLTTIYMTIMTGPMITMLSSNLFVMWIGLEMNLLALIPLMVNNPNPR-STEAATKYFLTQATASMILLLSILMNFKQLGMW--TFQPETDNIIMAMTFTSLAIKLGLAPFHSWLPEVTQGIKLNVGLVLLTWQKIAPLSIMLQFYELIDPYLLILS-AIISVLVGGWNGLNQTQTRKIMAYSSIAHMGWMISILAYNPSLTTLNLLIYIIMTTPLFLIFHTHSFTSISSA---SLMWNKMPMALPMVSLILLSTGGLPPLTGFLPKWTIIAELMKNNSLFLATLMAMTALINLFFYTRLIYSTSLTTFPSNNSSKMYI-HQDHTKKANIL-------PPMMVISTMLLPLSPLLL------MN-MTPILLINITLATVLISAAFWLPHLNIYAEKANPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWVMQLSHMYTPTTIALTLITVLALGLAYEWMQKG--LEWTE-MTPAVFNITLAFTFSLLGALMFRAHLMSTLLCLEGMMLSLFILATITPLNTHSMIMLPIPIVILVFAACEAAVGLALLAKISNTYGSDFVHNLNLLQCMLKIILPSLMLLPLTWFSSNKKMWVNVTAYSLLISLISI-NLLWQNNENNLGFS-TMFSTDPLSAPLLVLTTWLLPLMLLASQNHIKKEPEHNKKLYISLLVCLQTLLIATFSANELIMFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLAGSIPLLIALVYIQNSAGTLNHMLMALTSPSID-QTW-----SNNVLWLACMMAFMVKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRISTILDP-VTKYMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAIMIQTPWSFMGATALMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMTFPLMATWWIMASLANLALPPTINLIGELMITVSLFSWSTPSIILLGTNILLTSLYSIYMIVTTQRGKLTNHMNNLQPSHTRELTLMALHILPLMLLTINPKLIMGPTL------MNIITSS-IFLILALLMSPMAIS---FTNMTKH-MNFPNYVTSC-IKCAFFMSLIPLSSFFNSGAELMITNWQWVSIGSIKLSLSLKFDFLSIILLPVALYVTWSIMEFSMWYMHSDPNLNRFIKYLLMFLITMIILTTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGLMLAMAWFCTKTNSWELQQIFIT-NN-PDTLPLAGLLLAAMGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLISNNNTILTAMLCLGAMTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPHLAFLHICTHAFFKAMLFMCAGSIIHSLNDEQDIRKMGGLAKPMPFTSSCLMIGSLALTGMPFLTGFYSKDLIIEAANTCYTNAWALSITLAATS-MTAVYSMRIIYFVLMTKPRFSTTTTINENNPLLINPIKRLALGSILAGFFISYNIPPTTVQVMTMPWYMKAAALMITIAGFAIALDLNNMTNNLK--PTKPLPSNSFSTSLGYFPTVIHRLLPMKTLDTSFKTALTMLDLIWLEKAIPKATSTIHSLTSS--VLSTQKGMVKLYFLS---YLVTL--ICVPMTMLI---------------- +>Mogera_wogura_Japanese_mole +----MNENLFASFITPT-MMGLPIVILIIMFPSIMFPAPN-RLVNNRLISLQQWLIQLTSKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTATAFITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILATI-MTLFILFQLKISKHTYPA-NPEPK-SLKSLKQ-NTP-W-ETKWTKIYSP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPILLGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSIMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAILAGFVHWFPLFTGYTLNQTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFASKREVLTVELTSTNIEWLHGCPPPYHTFEEPTYVNQ-K--------MAYPFQLGFQDATSPIMEELLHFHDHALMIAFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMVPTTDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHAWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKYFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSTTLLCMGLLGNSLTMYQWWRDIIREGTFQGHHTPIVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTHELGGFWPPAGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQALFITIALGVYFTVLQAAEYYEAPFTISDGVYGSTFFMATGFHGFHVIIGTTFLTVCFIRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMFMETWNIGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAGVHLLFLHETGSNNPSGLSSDTDKIPFHPYYTIKDILGALILILALSSLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILALMPFLHTSKQRSMMFRPISQCLFWLLVADLLILTWIGGQPVEHPFIIIGQLASILYFSLILIMMPLASLMENNLL---KW--------MY--------LINLLALIVPILLAVAFLTLIERKVLGYMQLRKGPNIVGPFGLLQPIADAVKLFTKEPLRPLTSSISMFIIAPILALTLALTMWIPLPMPHPLINMNLGVLFMLAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMSGSFSLSNLIITQEYTWLLISSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNVLTTILFLGAFHNPYLPELYSINFTIKALILTISFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPVFLSGI-P-PQS--MNP-LVLSLILFTVALGTTIVLISSHWLLIWIGFEMNMLAITPILMKNFNPR-SMEAATKYFLTQATASMLLMLAIIINLTFSGQW--TTMKMTNHTASMMMTIALIMKLGMAPFHFWVPEVTQGIPLTSGMILLTWQKIAPLSVLMQTAHSINTNIMLTT-AILSIAVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIMTYNTTMTVLNLMIYITLTLAVFMLLYINSTTTTLSL---SHLWNKTPLMSTLILMLMLSLGGLPPLSGFMPKWMIINELTKNDNIILPTIMAIMALLNLYFYMRLTYSTSLTMFPSTNNMKMKW-QFEYTKKTPFL-------SPLIILSTMLLPLTPMFLMLE---MN-MLLTITVNTLLSSILVLIAFWLPQLNTYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNDVKTVLTMALILITLLALSLAYEWTQKG--LEWTE-MSLVYMNIMIAFLTSLLGLLMYRSHLMSSLLCLEGMMLSLFILSTIMILNIHFTLASMIPIILLVFAACEAAIGLSLLVMVSNTYGVDYVQNLNLLQCMLKIIMPTVMLLPLTWLSNNNLIWINTTMYSLLISLSSL-LYLNQPNDNSINFS-TTFFSDSLSTPLLILTTWLLPLMLMASQFHLSNEHITRKKLYISMLILLQIFLVMTFTATELILFYILFEATLVPTLIIITRWGNQTERLNAGMYFLFYTLVGSLPLLVALTYLQNTMGSLNLTIMQLLSTPLP-NKW-----SSSLLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITMVLSP-YTSFMAYPFLALSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAIMIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLMASLTNLALPPTINLIGELLVMLSSFSWSNFTMILMGLNMTITALYSLYMLIQTQRGKYTHHIININPTFTREHALMALHMTPLLLLTLNPKIILGFMY------MNLLTSS-LSLSLLILIIPVMMT---LTSTYKK-DTFPAYVKTT-ISYAFMISMIPALLFIYSGQESMISNWHWMTINSVKLSISLKLDYFSIVFMPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFVLSMAWFLFNSNSWELQQIFITNTG-QDILPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNLTIQTLTLSLGAMTTLFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKAMPFTTTALITGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATS-LTAVYSTRIMFFALLGQPRFPTMILINENNPLLMNPIKRLLLGSIFAGFLISNNLTPMTIPQMTMPYYLKLTALVVTVLGFTLALELNTMTQYLK--YPHTSNTHKFSNQLGFFPIIIHRLLPTMSLNLSQKSASMLLDLTWMEAAIPKVTSHLQLMAST--MVSNQKGLVKLYFLS---FLITL--ILTLMLF----------NFHE---- +>Trinomys_dimidiatus_ +----MNENLFASFMTPT-MLGLPIVILIIMFPTILFPSPK-QLINNRMITIQQWLVKSTLKQMMLIHSTKGRSWALMLTTLILFIGTTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVLLGFRHKTKTSLAHFLPQGTPAPLIPMLVMIETISLFIQPVALAVRLTANITAGHLLMHLIGGATSILMT-ISTPIALTTFIILLLLTMLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITILSMM-ITLFIIFQLKTLSHQFPA-NPQSS-HLEQTKQ-KTP-W-EKKWTKIYSP-LS---------MLINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNSTWAKAHFFIMFTGVNITFFPQHFLGLSGMPRRYSDYPDAYTFWNAVSSMGSFISLTAVMVMIFMVWEAFASKREATMTELTTTNLEWLHGCPPPYHTFEEPTYIKT-L--------MAYPYQLGFQDATSPIMEELLHFHDHTLMIVFLISTLVLYLISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEVNNPLLTVKTMGHQWYWSYEYTDYEELNFDSYMVPTTDLKPGELRLLEVDNRVVLPMEVPVRMLISSEDVLHSWAIPSLGLKTDAIPGRLNQTILTSSRPGLFYGQCSEICGSNHSFMPIVIETVTLDTFENWCSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFSSNTLLYLSMLTNMLTMYQWWRDVVREGTYQGHHTSTVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGYWPPTGIYPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKQMTQALSITIILGAYFTLLQMSEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLLTCLMRQLYFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNMRKSHPLIKIINHSFIDLPAPSNISAWWNFGSLLGVCLALQIITGLFLAMHYTADTTTAFSSVTHICRDVNYGWLIRYAHANGASIFFIFLYFHIGRGIYYGSYTFMETWNIGIILLFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPTLVEWIWGGFSVDKATLTRFFAFHFILPFIITAMVMIHLLFLHETGSNNPSGLNSNSDKIPFHPYYTIKDILGLLFMLTALFMLTLFSPDLLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALMFSILILMLFPTLHMSKQRSMSFRPMSQCLLWILVANLIILTWIGGQPVEHPFITIGQLASISYFCIILILMPATSLMENKML---KW--------MY--------LINFLSLIIPVLMAMAFLTLMERKLLGYMQLRKGPNIIGPYGVLQPMADALKLFIKEPLRPSTSSMFLFTIAPSLALTLALSMWIPIPMPHPLINMNLGALFILATSSLAVYSILWSGWASNSKYALFGALRAVAQTISYEVTLAIILLSILLLNGSFTLSTLMVTQKNIWLILPTWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNILLMNALTTTIFFNFMPMALTPEWYSMNFTIKTLALTALFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISMPIFLCSI-P-PQSI-MNI-TLMMTIYTTLIMGTMITLTSSHWLLMWAGLEMSMLSIIPILMNKPSPR-STEAATKYFLTQATASMILLLAAIMTMMHSGQW--SVTHTNNQIISLALTLSLIMKLGLAPFHFWVTEVTQGTPLIPGMIMLTWQKIAPLSILIQIYPMINQPLITTS-ALLSALLGGWGGLNQTQLRKILAYSSIAHMGWMLVVMNYNPSISLFNLVIYITLTISIFITLHMNNNLATLSL---SHTWSTAPPIIIIILMNLLSLGGLPPLTGFSPKWFIIHEMVKNNNIMITTLMTIMALLNLYFYMRLTYSTTLTLYPSTSNSKTKW-YFHNNKTMTIL-------PPLITLSIMTLPLTPLMINFN---MN-IIMSIMINYLLTSILITVAFWIPQINIYTEKASPYECGFDPTEITRLPFSMKFFLIAITFLLFDLEIALLLPLPWAFQTIYLKNTVWISIALVLILALGLIYEWLQKG--LEWAE-MTSILLNMIMAFIVSFMGVMIYRSHMMSTLLCLEGMMLSMFTLGTTTMLNLHYTLSFSTPVVLLVFAACEAAVGLALLVMISNTYGIDYVQNLNLLQCMLKIIIPTIMLIPTTWLSKNTMIWINSTSHSLLIALVSL-IYLNKLDITNTNHS-LNFTSDALSSPLLVLTTWLLPLMIIASQHHLKNESEMRKKLYVCLLVSLQLFLILTFSVTEMILFYILFETTLIPTLIIITRWGNQTERMKAGLYFLFYTLAGSLPLLITLIYLQNQLGSLNFLLFNYHSPALH-PSW-----SNSLVWLACMMAFMIKLPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRISHLLEP-LTNYMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERVHSRTMLLARGLQMLFPLMALWWIIASLANLALPPSINLMGELLIILSTFSWCNATIILTGLNILITALYSLFMLISTQRGKLPYHARNMPPTFTRENILMSLHIIPLLLLVLSPKIIMGNLY------MNMFSST-FILTLAMLTLPTMPF---MTNTHKN-LLYPHYVKTI-VSLCFFISLIPTLILFHSNHEAITSNWSWLTMQTTQLNLSIKLDYFSVSFMSVALFVTWSIMEFSIWYMHSDPNMNKFFKYLLTFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRQDANTAAMQAVLYNRIGDIGFILSMIWFILNSNSWELQLIFSTQNP-NHLLPMMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTQNNEITQTMCLCMGALTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLYKILPTTSSSLMIGSLALTGIPFLTGFYSKDLIIETATTSYTNAWALTTTLIATT-LTAVYSTRIIFFALLNNPRFPFNYNMNENHPSMTNPIKRLAWGSIIAGFLIHHNIPITNVPQMTMPLNAKLTALLMTILGFTVAMELNMMTNNLK--INYSSKYSNFSNMLGYFPTLMHRTPPHLNLSMGQNLASSTVDLIWLEKTIPKYISSMQMKAST--LTSTQTGLLKFYFLS---FLTST--TLATIILV----------------- +>Eubalaena_japonica_North_Pacific_right_whale +----MNENLFAPFMTPV-MVGIPITTLIIILPSILFPTPN-RLINNRTISIQQWLTKLTSKQLMSTHSPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNVGMAIPLWAGTVFTGFRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGEATLALMN-ISLLTTLITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLLTILSML-LTLFVLLQLKISKHSHSP-NPKLV-LTKTQKQ-QTP-W-DTTWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNSTWTKIHFMIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFEEPAYINP-KWS------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEVNNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSTSML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLLTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITITLGLYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQMKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINDAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTTTAFSSITHICRDVNYGWIIRYLHANGASMFFICLYAHMGRGLYYGSYAFQETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAIVHLLFLHETGSNNPTGIPSNMDKIPFHPYYTIKDILGALLLILTLLMLTLFAPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAFIPMLHTSKQRSMMFRPFSQFLFWVLVADLLTLTWIGGQPVEHPYVIVGQFASILYFLLILVLMPTASLIENKLM---KW--------MF--------MINILTLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPVLALTLALTMWSPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLVNGSFTLSTLATTQEHLWLIFPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTAILFLGTFHDPHTPELYTTNLIIKTLLLTMSFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHISLPIMTASI-P-PQT--MNP-SILIILLTTLILGTMMVITSSHWLLAWIGFEMNMMAFIPIMMKNPSPR-ATEASTKYFLTQATASALLMMAIIINLMYSGQW--TVTKLFNPTASTLMTVALAIKLGLAPFHFWVPEVTQGIPLVTGLILLTWQKLAPLSILYQISPSINLHLMLTM-SLLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILLYSPTLTLLNLLIYITMTFTMFMLFIQNSTTTTLSL---SQTWNKMPVITTLTMLTLLSMGGLPPLSGFMPKWMIIQELTKNEILIMPTFMAITALLNLYFYMRLTYSTALTLFPSMNNMKMKW-QFDSTKQAILL-------PTAIVMSTMLLPLTPMLSTLL---MN-LLLTLLTNTTLALLLVFIAFWLPQLNAYAEKTSPYECGFDPMESARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLNTMLTMALFLISLLAASLAYEWTQEG--LEWAE-MTLIHMNIIMAFSMSLVGLLMYRSHLMSALLCLEGMMLSLFVLAALTILNSHFTLANMMPIILLVFAACEAAIGLALLVTISNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKNNLIWINSTTYSLLISFTSL-LLLNQLNDNSLNYS-LIFFSDPLSTPLLMLTMWLLPLMLMASQSHLLKEPPVRKKLYITMLIMLQVLLIMTFTATELILFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIYLQNTTGSLNFLLLQHWAQPLS-TSW-----SNIFLWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITPMLNP-LTEHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFLPLMATWWLLASLTNLALPPSINLIGELFVVMSAFSWSNPTILLMGTNIVITALYSLYMLIMTQRGKHTHHINNITPSFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSF-ALLTLLILTTPIVMS---TTSTYKN-NKYQSYVKNI-VFCAFITSLIPAMMYLHTNQEALISNWHWVTIQTLKLTLSFKMDYFSLMFMPVSLFITWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLLASMAWFLSNMNTWDLQQIFMLNQN-SPNFPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLMENNKFIQTTTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPFTTTALIIGCLALTGMPFLTGFYSKDPIIETATSSYTNAWALLLTLTATS-LTAIYSTRIIFFTLLGQPRFPPSTTINENNPLLINPIKRLLIGSIFAGFILSNSIPPMNTPLMTMPLHLKLTALAMTTLGFILAFEINIHTQNLK--HTYPSNFSKFSTLLGYFPTIMHRLPPHLDLLMSQKLATSLLDLTWLETILPKTTALIQLKAST--LTSNQQGLIKLYFLS---FLITI--ILSMILF----------NYPE---- +>Rattus_praetor_Large_New_Guinea_spiny_rat +----MNENLFASFITPT-VMGLPIVVTIIMFPSILFPSSE-RLISNRLHSFQHWLIKLIIKQMMLIHTPKGRTWALMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVILGFRHKLKNSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTMLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIVSSM-ITLFILFQLKISSQTFPA-APSPK-FLTTEKT-NNP-W-ELKWTKIYLP-LS-LPQQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVLVMIFMIWEAFASKREVLSVSYSSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHYNSTILLSLGLLTNILTMYQWWRDIIREGTYQGHHTPIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTHDLGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMNQALLITILLGLYFTILQASEYLETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIICLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLLKIINHSFIDLPAPSNISSWWNFGSLLGVCLMIQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYLHANGASTFFICLYLHVGRGMYYGSYAFLETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLDSNADKIPFHPYYTIKDLLGVFLLLLFLMTLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILILALLPFLHTSKQRSLTFRPITQTLYWILAANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIEDKML---KWN-------MY--------FINILTLLLPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPTLSLTLALSLWIPLPMPHPLVNLNLGMLFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQMLITTQEHMWLLIPAWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTSIVFLGPLYYINYPELYSINFMTETLLLSTAFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISIPVFLAGI-P-PYT--MNP-ITLIIIYFTIFMGPVITMSSSNLLLMWVGLEVSLLAIVPLLTNKKSPR-STEAATKYFLTQATASMIMLLAIILNYKQSGMW--MFQQQTNNMLLNMTLISLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQLLNPTITTIL-AITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLVIYILLTIPMFISLMMNSATTINSF---SMAWNKTPMILAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTRLIYSMSLTMFPTNNNSKMIS-HHTNLKYNLIL-------PTLTVLSTLTLPLSPQLTT-----MN-LFIIITINITLSFMLIMIAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAVQTTNITTMTTTAFILITILSLGLSYEWTQKG--LEWTE-MTSAFLNLTLAFTLSLLGTLMFRSHLMSTLLCLEGMMLSLFIMASTSTLNSNSMVSMTIPITILVFAACEAAVGLALLAKISNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLTWLSNNKKVWTNITSYSFLVSLMSL-SLLWQNDENHLNFS-ITFSSDPLSTPLIILTTWLLPLMILASQNHMKKENLTHQKLYISMLISLQILLILTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALISIQNSTGTLNFLILSLTTQPLP-STW-----SNSIMWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDP-LTKSLAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAIMIQTPWSFMGATMLMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMIFPLMATWWLLASLANLALPPLINLMGELFIVMATFSWSNPSIILTAANIVITGMYSMYMIITTQRGKLTSHMNNLQPSHTRELTLMALHIIPLMLLTINPKLITGLTM------MNMMTSA-ILMILILLTAPIIIS---MTNLTKL-INFPSYATSS-IKFSFFLSLLPLLLFFHHNTEYMITNWHWLTINSIKLNMSFKIDYFSILFLSVALFVTWSIMQFSSWYMHSDPHINRFIKYLMLFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRVGDIGFILAMTWFCLNMNSWELQQIFLT-NN-SNLVPLTGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFHPLTSNNSTIMTAMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGNMMKAMPFTSSCLIIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALMITLIATS-MTAMYSMRIIYFVTMTKPRYSPLITINENNPNLINPIKRLALGSIMAGFLISLNIPPTNIQVLTMPWYLKMTALSITILGFAIALELNNLTLNFSS-TKKPTRPSLFSTSLGYFPSIMHRAIPQKTLNSSYKMSLNLLDLIWLEKTIPKSTSITHTHLSK--MMANQKGLIKLYFLS---FLITI--LLIFILHIL---------NPEWFQ- +>Sarcophilus_harrisii_Tasmanian_devil +----MNENLFAPFICPT-IMGISTLPIIMIFPCLIFTTPK-RWLPNRIQMLQIWLIRLITKQMMTMHNNLGRTWALMLMTLILFIATTNLLGLLPYSFTPTTQLSMNISMAIPLWMATVLLGFRNKPKTSLAHFLPQGTPTLLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLISSAALALVS-INIVLSSVTLIVLFLLTILELAVAMIQAYVFTLLVSLYLHNNTMPQLETSAWFHVAGLTI-INIFCLFQLQLIGIEMIYIYPPEE-ILKLPEI-PFP-W-EKKWTKIYLP-LS-SALLL---MFITRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYAGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYMLNDTWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNILSSIGSFISLTAVILMVFIIWEAFASKREVSSVELTTTNIEWLYGCPPPYHTFEQPVFIKA----------MPYPMQLGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYVLILMLTTKLTHTSTMDAQEVETIWTILPAIILVLIALPSLRILYMMDEIFNPYLTVKAMGHQWYWSYEYTDYEDLSFDSYMVPTQDLNPGQLRLLEVDNRVVLPMELPIRMLISSEDVLHAWTVPSLGLKADAVPGRLNQATLTSTRPGVYFGQCSEICGSNHSFMPIVLEMSTLKYFENWSHMMQ----------MTHQTHAYHMVNPSPWPLTGAMSALLLTSGMIMWFHFHSILLLFMGLSTMLLTMYQWWRDIVREGTYQGHHTPVVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLSPALELGGCWPPVGIYPLNPLEVPLLNTAILLASGVSITWAHHSLMEGSRKQMIQALTTTIALGLYFTILQATEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSLFLIVCLIRQLFYHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLLKIINHSFIDLPTPSNISAWWNFGSLLGMCLIIQILTGLFLAMHYTSDTFTAFSSVAHICRDVNYGWLLRNLHANGASMFFMCLFLHVGRGIYYGSYLYKETWNIGVVLLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLAEWIWGGFAVDKATLTRFFAFHFILPFIIMALTIVHLLFLHETGSNNPSGINPNSDKIPFHPYYTIKDTLGFMFLLLTLLILTLFSPDSLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLIIPLLHTSNQRSMMFRPISQTLFWILTANLITLTWIGGQPVEQPFIIIGQLASVLYFLLILVLMPLAGLFENYMLK-PKW--------MF--------TINLLLYIIPILLAVAFLTLIERKVLGYMQFRKGPNIVGPYGLFQPFADAVKLFTKEPLHPLTSSTSMFIIAPILALSIALTIWTPLPMPNTLLDLNLGLIFILSLSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVSLAIILLSIMLINGSFTLKTMSVTQENFWLIITTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIAMNAITTILFLGPSLMPNLSHLNTMSFMTKTLLLTMTFLWVRASYPRFRYDQLMHLLWKNFLPMTLAMCLWFISLPIALSCI-P-PQM--MSP-YVTTILTLSLFIGTCLTIFSEHWFTAWMGLEINTLAIIPMMTTPKNPR-ATEAATKYFLTQSTASMVMMFAIIYNAWSTNQW--TLMQLSDNWASIAMTLALAIKLGLAPFHFWVPEVTQGIPLLTGMILLTWQKLAPTAILFQIAPHLNMKILIML-AILSTLVGGWGGLNQTHLRKILAYSSIAHMGWMIIIVQINPTLTILSLTIYIMATLTMFLTLNLSNVTKIKSL---GGLWNKSATTTIIILLTLLSLGGLPPLTGFMPKWLILQELINNNNIMTATLMALSALLNLFFYMRLIYASSLTMFPSTNNSKMQW-YNNPTQITMLI-------PTTTVISSLLLPLTPLFITLS---MN-LMLTLLINSTLATVVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQLPTANTILFLSYFIIILLTGGLAYEWFQKG--LEWTE-MLSINMNLIVAFALALVGVLIYRSHLMSTLLCLEGMMLSLFILMTLLITHFHMFSMSMLPLILLVFSACEAGIGLALLVKISTTHGNDYIQNLNLLQCMLKILTSTFMLIPLTWYSKKPWLWLNTTMHSFIISIWSL-TLLYHDSDLGYNYN-NYFSLDSLSGPLLILSCWLLPLMIIASQNHLAHEPLVRKKIYLTTLIILQLSLIMAFTASELIMFYILFETTLIPTLIIITRWGSQNERLNAGLYFLFYTLMGSLPLLVALLYLHNNLGSLHMLTMTLVAPTLD-SSM-----STSLLWYACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITAFTEP-FTSTLCYPFMILSLWGMIMTS--SICLRQTDLKSLIAYSSISHMGLVIIAALMQSPMGFMGATVLMVAHGLTSSMLFCLANTNYERTHSRTLILTRGLQMILPLMCAWWLLASLANLAQPPSINLLGELLVIMTSFSWSNFSLILLGTNTVITAVYSLYMLITSQRGKFTDHIYPIKPTLTREHMLMTLHLLPLLIISTCPKFILGVTY------MNYLLNTFLLLTIIMITFPLIYN---IFMPNKT-INFPPLCKTM-IKLAFFTSLIPLMLFIYSGQESTITNWQWLPISTFNLSMSFKLDYFSITFIPIALYVTWSILEFSIWYMHTDPNIHRFFKYLIIFLFTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWFGRTDANTAALQAVLYNRIGDIGFMLAMAWMMLNCNSWDIQHIFMTNIN---TPALLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFNPTMQGNQTALTTMLCLGGITTLFTAICAVTQNDIKKIVAFSTSSQLG--LMMVALGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLLTLLPITSSAIMLGSLALMGTPFLAGFYSKDAIIEAMNTSHVNTWALCITLIATM-LTAFYSMRVIHFVLLNEPRFLPIPVMSENNPNLINPIMRLALGSILTGFLLTTSIPPTTTIPMTMPTMLKISAMLVTIMGILISIELFTLTNKMP--IMPMIHTHNFSNMLGYFTHIFHRLKPLAGLQTGQHIATMLIDLGWYEKTGPKGQANLHSSLSS-TFTSTQKGLIKYYFLS---FMISM--ALTLMVL------------------ +>Ursus_arctos_brown_bear +----MNENLFTSFITPT-MVGIPIVLLIIMFPSILFPSPS-RLIDNRLVSIQQWLVRLTSKQMLSIHSHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVATGFRYKTKASLAHFLPQGTPFPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLTLTS-ISTITAFITFTVLVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSITILSMA-LTLFIALQLKVSKYKYPE-TPEPK-SLSSLKK-LVP-W-EEKWTKIYLP-LL-SPQR----MFMSRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIVNMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLNNTWAKIHFMIMFIGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAVVELTSTNIEWLHGCPPPYHTFEEPAYVTL-K--------MACPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISTMLTTKLTYTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINSPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEEWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMLLLLLGLTTNMLTMYQWWRDIIRESTFQGHHTPAVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGACWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGSRKHMLQALFITISLGVYFTLLQASEYYEASFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFLRQLHFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSFIDLPTPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVHYGWVIRYVHANGASIFFICLFMHVGRGLYYGSYLFSETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALLLALTLATLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILAIIPLLHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFTILLVLMPVAGIIENNLL---KW--------MF--------MINIISLVVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADATKLFTKEPLRPLTSSTTMFIMAPILALTLALTMWVPLPMPYPLVNMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPTWPLAMMWFISTLAETNRAPFDLAEGESELVSGFNVEYAAGPFALFFLAEYTNIIMMNALTTILFFGAFHNPYMPELYTVNFTVKTLLLTASFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIITASI-P-PQM--MKP-PILIIITSTIILGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMLGIIINLLHSGHW--TISMIPNPIASTVITIALAMKLGLSPFHFWVPEVTQGVPLSSGMILLTWQKIAPLSVLYQISPSINPNLLVAM-AATSVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLTIYIMMTLGTFMLFMYNLSTTTLSL---SHTWNKLPLIASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPMFMAITALLNLYFYMRLAYATALTMFPSANNTKMKW-QFESMKKMIFL-------PPLIVASTMLLPLTPMLSIMD---MN-LILALFTNMLLASLLVLIAFWLPQLNIYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDNLMTMLTMALLLISLLAVSLAYEWAEKG--LEWAE-MPVVYVNIFLAFIVSLMGLLVYRSHLMSSLLCLEGMMLSLFVMLTVTVLNNHFTLANMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIFPTMMLVPLTWASKPNMIWINTTAYSLLISLISL-TYLNQLSDNSLNFS-LLFFTDSLSAPLLTLTTWLLPLMLMASQFHLSKETLTRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLHTQNNLGSLNFLLMQYWIQPLP-NSW-----SSMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLSP-LTSFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERTHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITITLMGTNIIITALYSLYMLITTQRGKCTNHVKSIKPSFTRENALMALHLLPLLLLSLNPKMILGPIY------MNLFTSS-IITTLLMLTMPIILT---SASTHKN-KSYPQYVKTT-VSYAFMISTIPMVMFLYSGQEVIISNWHWMTIQTLKLTLSFKLDYFSMIFMPVALFVTWSIMEFSIWYMHTDLNINHFFKYLLMFLITMMILVTANNLLQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDVGFIMAMAWFLLNTNAWDFQQIFAIEHE-NLSIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKTIQTATLCLGAMTTLFTAACALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICMHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPLTTTALIIGVLALTGMPFLTGFYSKDLIIETANTSYTNAWALLTTLVATS-MTAAYSTRIVFFVLLGQPRFNPVIIINENNPLLINSIKRLLLGSIFAGYLIFHNITPTTIPQTTMPYYLKMMALAVTMLGFILALELNSTTQTLK--LDYPQNPFKFSIQLGYFPIITHRLLPMMSLSMSQKMASMLLDTTWLENVLPKSISYFQMKSSI--TVSNQKGLIKLYFLS---FMITL--TLSFFVL----------NFHE---- +>Mesocricetus_auratus_golden_hamster +----MNENLFASFITPT-MMGLPVVIIIIMLPSMMLTSSN-RLLSNRFHTFQQWVVKMITKQMMSIHSPKGQTWCLMLVSLIIFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPLWAGTVFLGFRHKMKSTLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTS-ISPPTAMITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTVLTST-ITLFILIQLKISLQNFPN-KPSNK-YLKTLKL-SNP-W-ELKWTKIFSP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLMFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDTWAKAHFIIMFVGVNMTFFPQHFLGLAGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVLVMIFMIWEAFASKREVLTVDYSSTNLEWLHGCPPPYHTFEEPTFVKV-K--------MAYPSQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYVITLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTTDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFENWSVSMV----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLAMWFHYNTLTLLYLGLLTNMLTMYQWWRDIVREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNNMNQALLITIGLGVYFTALQASEYLETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLMVCLLRQLKYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKKHPLMKIINHSFIDLPTPSNISSWWNFGSLIGLCLIIQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGIYYGSYTMVETWNVGIVLLFAVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIVTALVLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDLLGVFLLLIALMTLVLFFPDVLGDPDNYTPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALILSILVLAALPLLHTSKHRAMIFRPITQTMYWILVADLLLLTWIGGQPVEYPFIIIGQLASIAYFAIIIIFMPIASMIEDSIL---KFI-------MH--------LINILMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFIKEPLRPLATSTSLFIIAPTLSLMLAFSLWIPLPMPHPLINMNMGMLFILAISSLSVYSILWSGWASNSKYSMFGALRAIAQTISYEVTMAIILLSVLLMNGSFSLQFLITTQEHTWLLLMSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTIVFLGPIHSLYLPHVYTTDFMIKTLMLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCTWHISIPIFMASI-P-PYT--MNP-ITLLIIYFTILSGPMVTMLSNNFFLMWIGLEMNLLAIIPVMTNKSNPR-TTEAATKYFITQATASMIFLLSIIMNYKQLGTW--TIQPQTSSLTSTLIFISLAIKLGLSPFHAWLPEVTQGIPLSTGLLLLTWQKLAPLSILFQVYELINPHVLIMS-ACASVMIGAWGGLNQTQTRKIMAYSSIAHMGWMISILPYNPSLTIINLIIYILLTLAMFSILHPHSFFSIKST---SLLWNKSPIMLPLMSSILLSMGGLPPLTGFLPKWLIITELLKNNNQLLASIMAILALVNLFFYTRLIYSTSLTTFPSTNNSKMFN-HQKNMKKYPTL-------PLTAITSTLMLPLLPLML------MN-LILAVSINMMLSLILILVAFWLPQLNVYAEKASPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQSTNLKTTLIISTMFLSILALGLAYEWKQKG--LEWTE-MTTTLFNITLAFVFSLIGTLMFRSHLMSTLLCLEGMMLTLFIMLTITSLNIHSMITYPIPIVILVFAACEAAVGLALLVKVSSTYGMDYVQNLNLLQCMLKIIVPSLMLLPLTWFSSSKKVWINVTAYSFLINIIAM-TTLWQNSDGTLNFS-SMFSMDSLSSPLTALTIWLLPLMLLASQKHIKKETVLNKKLYISMLVTLQILLIMTFSANELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALISIQKSLGTLNILLLSLNTSTLD-NNW-----SNYILWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRVSIILDP-MTETMAYPFILLSLWGMLMTS--SICLRQTDLKSLIAYSSVSHMALVIAAIMIQTPWSFMGASALMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQTAFPLMATLWFLGSLANLALPPSINLIGELLITITLFSWSHLSIILVGTNILITALYSLYMLIMTQRGKLTFHMNNLQPSYTRELTLMMLHITPLILLIMNPKLILGPTL------MNPITSV-IILIFVALMLPIMLS---STNIYKT-YSFSNHATSM-IKYSFMLSLIPLCTLFYSNTELLITSWHWVTINTIKLSINLKFDFFCIIFLSVALFVTWSIMEFSSWYMHSDPNLNRFIKYLLLFLITMIILTSANNMFQLFVGWEGVGIMSFLLIGWWYGRSDANTAALQAILYNRIGDIGFIATMAWLSLNMNSWEFQQIFMT-NN-NSIIPLLGLLIAAMGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMSNNNMALTMMLCLGSITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLLKPLPFTSSCLIIGSLALTGVPFLTGFYSKDLIIEAMNTCYTNAWALLVTLLATS-LTAAYSLRIIFFALMSKPRYLPLITLNENNPKLMNPIKRLAMGSMFAGFIMTYNIPTTSIQVMTMPWYLKTTAILVTLMGFTIALELNNLTYNLK--SNTSTLTNLFSTSLGYFTLIFHRLLPKKFLTMSFNTPLNMLDLTWLETSIPKAISYMNLTASQ--ILANQKGLIKLYFMS---FLITL--LSIPILLIS---------FHE---- +>Cricetulus_longicaudatus_long-tailed_hamster +----MNENLFSSFITPT-LMGLPIVIVIIMFPLVMMTSSK-RLVSNRLHTFQQWLIKLTTKQMMTIHSPKGRTWSLMLASLIIFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPLWAGAVILGFRHKMKDSLAHFLPQGTPITLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTT-ISPPTAMITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLETSTWFTTVLASS-ITLFVLIQMKISLHNFYK-NPSNK-YLKLHKS-TNP-W-EQKWTKIYSP-LS-LPQL----MFVNRWLFSTNHKDIGTLYLMFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIVNMKPPAVTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLDDTWAKAHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLIMIFMIWEAFSSKREVVTVDHTSTNLEWLHGCPPPYHTFEEPTFVKV-K--------MAYPSQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIITLMLSTKLTHTSTMDAQEVETIWTILPAAILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMVPTNDLKPGDLRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLYYGQCSEICGSNHSFMPIVLEMVPLKHFETWSVSMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSLTILYIGFLTNTLTMYQWWRDIVREGTYQGHHTPIVQKGLRYGMILFIVSEIFFFAGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNNMNQALLITIILGVYFTALQASEYLETTFSISDGIYGSTFFMATGFHGLHVIIGTTFLTVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTIMRKKHPLMKIINHAFIDLPAPSNISSWWNFGSLIGLCLITQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFMHVGRGVYYGSYTMVETWNVGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGALLLLIALMTLVLFFPDILGDPDNYTPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILATLPLLHTSKLRTMIFRPITQTMYWLLVADLLLLTWIGGQPVEYPFIIIGQIASVAYFSIIVIFMPIASMIEDSVL---KFT-------MH--------LINIMMLLIPILIAMAFLTLVERKILGYMQLRKGPNIVGPCGILQPFADAMKLFIKEPLRPLATSTTLFIMAPTLSLTLAFSLWIPIPMPHPLINMNMGVLFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSFSLQTLITTQEHMWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTIVFLGPYNNPMHPEMFTTNFMLKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISMPIFMASI-P-PYT--MNP-FTLLIIYFTIFSGPMVTMLSSSFFLMWIGLEMNLLAIIPLMMNKSNPR-SMEASTKYFITQATASMIFLMSVILNFKQMGLW--TFQPQTSNLTMTLIFISLSIKLGLSPFHAWLPEVTQGIPFNTGLLLLTWQKVAPMTILFQIYQSIDTYILISS-AIISVMVGAWGGLNQTQTRKIMAYSSIAHMGWMISILPYNPLLTIINLIIYILLTLAIFSILHPYSFSSIKTM---SLLWNKAPVLLPMMALILLSTGGLPPMTGFMPKWLIITELLKNNNTIMATTMAIAALINLFFYTRLIYSTSLTIFPTNNNSKMFI-QQPSNKKYFTL-------PSTIILGTLTLPLSSLAL------MN-LMLAISINIILSLTLISIAFWLPQLNIYTEKAGPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQSLTIKMMLVISFLFLSVLGLGLAYEWKQNG--LEWTE-MMTTVVNIVLAYTFSLIGTVVFRSHLMSTLLCLEGMMLSLFIMTTITSLNTHSMIMYSNPIVILVFAACEAAVGLALLVVVSNTYGTDYVNNLNLLQCMLKIITPSLMLLPLTWLSSSKNVWINVTTHSFLINILAM-TTLWQMSEAGIGFS-PMFYTDPLSSSLTMLVIWLLPLMLVASQNHIKKETELNKKLYISMLIMLQILLIATFTANEFMLFYILFEATLIPTLVIITRWGNQTERLNAGLYFLFYTLVGSIPLLIALISIHSSLGSLNILFLTLSNSTLN-QSW-----SSHILWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRMSIILDP-LTKSMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAIMIQTPWSFMGASALMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQTAFPLMALFWFLGSLTNLALPPSINLIGELLISVSLFSWSNLSILLVGVNILITALYSLYMLITTQRGKMTSHMINLQPSHTRELTLMMLHVAPLILLMINPKLAMGNTL------MNTITST-ILLIFLLLTLPIMMT---MSDFYKK-TNFPTHVTSM-IKLTFLLSLIPLCILFHSNTEILITNWHWVTINTIKLSVNLKFDFFCIMFLPVSLFVTWSIMEFSSWYMHSDPNLNRFIKYLLMFLITMIILTSANNMFQLFIGWEGVGIMSFLLIGWWHGRQDANTAALQAILYNRIGDIGFITTMAWLCLNNNSWEFQQILMM-EN-KSLIPLLGLLVAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMISNNNTALTMMLCLGSLTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLKPLPFTSSCLIIGSLALTGIPFLTGFYSKDLIIEAANTCYTNAWALLITLLATS-LTAVYSLRIIFFALMSKPRFPPLIIMNENNPMLVNPIKRLALGSIFAGFIISNNIPISSVQIMTMPWYLKTTAILVTIMGFSIALELNNLTYNLK--LNMQSPQNMFSTSLGYFTLIIHRVLPMKYLTMSFNTALTTLDLTWLEKAIPKTISLSNYKTSQ--TITNQKGLIKLYFMS---FLISL--LTIPILLIN---------FHE---- +>Ursus_americanus_American_black_bear +----MNESLFTSFITPT-MMGIPIVVLIIMFPSILFPSPS-RLVNNRLVSIQQWLVRLTSKQMLSIHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWTGTVAIGLRYKTKASLAHFLPQGTPFPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTS-ISTITALITFTILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSAWSITILSMV-LALFIMFQLKVSKYKYPE-IPEPK-PLSSPKK-PMP-W-EEKWTKVCSP-LL-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFMIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAVVELTSTNIEWLHGCPPPYHTFEEPTYVTL-K--------MAHPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISTMLTTKLTHTNTMDAQEVETVWTILPAMILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMTPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFSSVFLLLLGLTTNMLTMYQWWRDIIRESTFQGHHTPVVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGACWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYEASFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFLRQLHFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSLIDLPTPSNISAWWNFGSLLGVCLVLQILTGLFLAMHYTSDTTTAFSSITHICRDVHYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYLLSETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVNKATLTRFFAFHFILPFIILTLAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDALGALLFILALTTLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILAIIPLLHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFTILLVLMPIAGIIENNLS---KW--------MF--------MINTISLVVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAMKLFTKEPLRPLTSSVTMFIMAPILALTLALTMWIPLPMPYPLVNMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLTIILLSVLLMNGSFTLSTLITTQEHLWLIFPTWPLAMMWFISTLAETNRAPFDLAEGESELVSGFNVEYAAGPFALFFLAEYTNIIMMNALTTVLFFGAFHSPYMPELYTVNFTVKTLLLTASFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVTLPIITASI-P-PQM--MKP-PILIIITSTIVLGTMIVLFSSHWLMIWIGFEMNMLAIIPVLMKKFNPR-AMEASTKYFLTQATASMLLMLGIIINLLYSGHW--TVSMIPNPVASTVITIALAMKLGLSPFHFWVPEVTQGVSLSSGMILLTWQKIAPLSVLYQISPSINPNLLVTM-AATSVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMYNLSTTTLSL---SHTWNKSPLIASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIIMPMFMAITALLNLYFYMRLTYATALTMFPSANNMKMKW-QFESTKKMILL-------PPLIVASTMLLPLTPMLSIMD---MN-LILALFTNMMLASLLVLIAFWLPQLNIYAEKVSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDNLTTMLTMALLLISLLAASLAYEWTEKG--LEWAE-MPVVYVNIFLAFIVSLMGLLIYRSHLMSSLLCLEGMMLSLFVMLTVTVLNNHFTLANMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIILPTMMLMPLTWASKPNMIWINTTAYSLLISLISL-TYLNQLSDNSQNFS-MLFFTDSLSAPLLALTTWLLPLMLMASQFHLSKETLARKKLYITMLILLQLFLIMAFSAMELILFYILFEATLMPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLHTQNNLGSLNFLMMQYWTQPLP-NSW-----SSAFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGP-LTSFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMVAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVVATFSWSNITIALMGTNIIITALYSLYMLITTQRGKYTDHVKSIKPSFTRENALMALHLLPLLLLSLNPKMILGPIY------MNLFASS-IAMTLLMLTMPIILT---SASTYKN-KFYPQYVKTT-ISHAFMISTIPMMMFFYSGQEMIISNWHWMTIQTLKLTLSFKLDYFSMIFMPVALFVTWSIMEFSIWYMHTDPNINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLNTNAWDFQQIFAIEHD-NLNIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTIQTAALCLGAMTTLFTAACALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNNEQDIRKMGGLFKALPLTTTALIIGTLALTGMPFLTGFYSKDLIIETANTSYTNAWALLTTLIATS-MTAAYSTRIVFFALLGQPRFNPAIVINENNPLLINSIKRLLLGSIFAGYLISHNITPTTIPQMTMPYYLKMTALAVTMLGFILALELNSTMQGLK--FNYPQSPFKFSNQLGYFPIIIHRLLPMMSLSMSQKTASMLLDMIWLENVLPKSISYFQMKSSI--TVSNQKGLIKLYFLS---FMITL--ALSFFVL----------NFHG---- +>Ursus_thibetanus_Asiatic_black_bear +----MNENLFTSFITPM-MVGVPIVVLIVMFPSILFPSPS-RLIDNRLVSIQQWLVRLTSKQMLSIHNRKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVATGFRYKTKASLAHFLPQGTPFPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTS-ISTITALITFTILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSITILSMV-LALFIMFQLKISKYKYPE-TPEPK-SPSSSKK-LMP-W-EEKWTKIYSP-LL-LPR-----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFMIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAVVELTSTNIEWLHGCPPPYHTFEEPAYVML-K--------MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISIMLTAKLTHTNTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMTPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMFLLSLGLTTNMLTMYQWWRDIIRESTFQGHHTPVVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGACWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGSRKHMLQALFITISLGVYFTLLQASEYYEASFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFLRQLHFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSLIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDATTAFSSVAHICRDVHYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYLLSETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDALGALLLILALATLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILAIIPLLHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFTILLVLMPIAGIIENNLS---KW--------MF--------MINTISLVVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPVADAVKLFTKEPLRPLTSSATMFIMAPILALTLALTMWIPLPMPYPLVNMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFALSTLITTQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLAEGESELVSGFNVEYAAGPFALFFLAEYTNIIMMNALTTILFFGAFHNPYMPELYTVNFTVKTLLLTASFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIITASI-P-PQM--MKP-PILIIITSTVVLGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMLGIIINLLHSGHW--TVSMIPNPIASTVITIALAMKLGLSPFHFWVPEVTQGVPLSSGMILLTWQKIAPLSVLYQISPSINPNLLVAM-AATSVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLAIYIMMTLGTFMLFMHSLSTTTLSL---SHTWNKLPLTASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPTFMAITALLNLYFYMRLTYATALTMFPSANNMKMKW-QFESTKKMILL-------PPLIVASTMLLPLTPLLSIMD---MN-LILALFTNMLLASLLVLIAFWLPQLNIYAEKASPYECGFDPVGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDNLMTMLIMALLLISLLAASLAYEWAEKG--LEWAE-MPVVYVNIFLAFIVSLMGLLIYRSHLMSSLLCLEGMMLSLFVMLTVTVLNNHFTLANMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIFPTMMLVPLTWASKPSMIWINTTAYSLLICLISL-TYFNQPGDNSLNFS-LLFFTDSLSAPLLALTTWLLPLMLMASQSHLSKETLTRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLHTQNNLGTLNLLMMQYWIQPLP-NSW-----SSVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLDP-LTSFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMVAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVVATFSWSNITITLMGANIIITALYSLYMLITTQRGKCTDHIKSIKPSFTRENALMALHLLPLLLLSLNPKVILGPIY------MNLFASS-IITTLLMLTMPIILT---GASTHKN-KFYPQYVKTT-ISYAFAVSTVPMMMFLYSGQEMIISNWHWMTIQTLKLTLSFKLDYFSMIFMPVALFVTWSIMEFSIWYMHTDPNINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVVYNRIGDVGFIMAMAWFLLNTNAWDFQQIFAVKHD-NLNIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTIQTAALCLGAMTTLFTAACALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKVLPLTTTALIIGTLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLVATS-MTAAYSTRIVFFALLGQPRFNPAIIINENNPLLVNSIKRLLLGSIFAGYLISHNITPTTIPQMTMPYYLKTTALAVTMLGFILALELNTTMQSLK--FNYPQNVFKFSNQLGYFPIIIHRFLPTMSLSMSQKMASMLLDTIWLENVLPKSISYFQMKSSI--TVSNQKGLIKLYFLS---FMITL--TLSFLVL----------NFHE---- +>Passer_domesticus_House_sparrow +----MNLSFFDQFSSPS-LLGIPLILISMTFPALLLPSLDNRWVTNRLSTLQLWLVNLITKQLMMPLDKKGHKWAMILTSLMIFLLLINLLGLLPYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVRLTANLTAGHLLIQLISTATTALFS-TMPAVSLLTLMVLFLLTILEVAVAMIQAYVFVLLLSLYLQENIMPQLNPNPWFFIMLSSW-LTFSLIIQPKLLSFVSMN-PPSHK---STTIPNTTP-W-AWPWT--------------M--TFINRWLFSTNHKDIGTLYLIFGAWAGMVGTALSLLIRAELGQPGALLGDDQVYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMLSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGIKVFSWLATLHGGTIKWDPPMLWALGFIFLFTIGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLHSTWAKTHFGVMFVGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNTISSVGSLISLTAVIMLVFIIWEAFASKRKVLQPELTSTNVEWIHGCPPPFHTFEEPAFVQV-QE-------MANHSQLNFQDAASPIMEELMGFHDHALMVALAICSLVLYLLTFMLTEKLS-SNTVNAQEIELVWTILPAMVLVTLALPSLRILYMMDEINEPDLTLKAIGHQWYWTYEYTDLKDLTFDSYMIPTTDLPLGHFRLLEVDHRVIVPMSSSVRVIVTADDVLHSWAVPSLGVKTDAIPGRLNQTSFLASRPGVFYGQCSEICGANHSFMPIVVESTPLANFESWSSLMSSX--------MAHQAHSYHMVDPSPWPILGAAAALLTTSGLTMWFHYNSPRLLILGLITTVLVMFQWWRDIVRESTFQGHHTPTVQKGLRYGMALFITSEAFFFLGFFWAFFHSSLAPTPELGGQWPPVGIKPLNPMEVPLLNTAILLASGVTVTWAHHSITEAKRKQAIQALFLTVLLGFYFTALQAMEYYEAPFSIADGVYGSTFFVATGFHGLHVIIGSTFLLVCLLRLIKYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS-MAPNLRKNHQILKVINDALIDLPTPSNISTWWNFGSLLGICLISQIVTGLLLAMHYTADTNLAFSSVAHMCRDVQFGWLIRNLHANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFLIVGLTLVHLTFLHETGSNNPLGIPSDCDKIPFHPYYTVKDILGFVLMLSLLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILVLFLTPLLHTSKFRSMTFRPLSQILFWALVANVLILTWVGSQPVEHPFIIIGQLASLSYFTIILILFPLAAALENKLL---KL--------MTNYPLLIN-LIMTLSYILPILIAVAFLTLVERKILSYMQGRKGPNVVGPFGLLQPLADGVKLFIKEPIRPSTSSPIMFLTTPMLALLLALSIWIPLPLPFSLADLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVILLSGNYTLGALAVTQEPLWLIFSCWPLAMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNTLTAILFFNPSFLNPPQELFPVVLATETLLLSAGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHISMPICYAGL-P-PYL--MNP-QAKLVFTISLLLGTTITISSNHWVMAWTGLEINTLAILPLISKSHHPR-AIEAATKYFLVQAAASALVLFSSMTNAWHTGQW--DITQLTHPVSCLILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPMALLFMTSPSLNPTLLTTM-AILSTALGGWMGLNQTQTRKILAFSSISHLGWMAIIVIYNPKLTLLNFYLYVLMTSTVFLTLNSIKALKLSTL---MTTWTKAPALNTMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQDMAPAATIISLLSLLGLFFYLRLAYCATITLPPHTTNHMKLW-YTNKPTSIL-V-------AILTTMSIILLPISPMILTII---MNMILFMLALSFTLSMLLTALNFWLAQMNPDPEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQSPITTLTWASLLILLLTLGLIYEWVQGG--LEWAE-MSYLHLSFYSAFTLSSLGLAFHRTHLISALLCLESMMLSMYIALAMWPIQTQTPASTLLPILMLTFSACEAGTGLALLVASTRTHGSDLLHNFNLLQCMLKIIIPTAMLLPLAILSPCKHLWTNTTLYSLLIAATSL-QWLTPTYYPNKGLT-PWTSIDQISSPLLVLSCWLLPLMIMASQNHLEQEPAARKRIFATTIVLAQLSILLAFSASELMLFYIAFEATLIPTLILITRWGNQPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGTLYLPMLKLSHPTLN-DSW-----SGLAASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVNP-TSSNLHYPFITLALWGALMTS--AICLRQIDLKSLIAYSSVSHMGLVVAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPMLPLMAIWWLLANLTNMALPPTTNLMAELTIVIALFNWSAFTIILTGAAILLTASYTLYMLTVTQRGPLPSHITSIQNSSTREHLLMALHAIPMFLLILKPELISGTPM---MD-LSLILNTFMLLTLATLATPILFPL-LSDNLKNT----PTTITNT-VKTSFLISLIPMTIYIHSGTESLTSIWEWKFIMNFKIPISLKMDFYSLTFFPIALFVSWSILQFATWYMASDPYITKFFTYLLFFLIAMLILIVANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDVGLIMCMAWLACAMNTWEIHQLPSSPQT--PTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFSNNQTALTLCLCLGALSTLFAATCALTQNDIKKIIAFSTSSQLG--LMMVTIGLNLPELAFLHISTHAFFKAMLFLCSGSIIHSLNGEQDIRKMGGLQKMLPTTTSCLTIGNLALMGTPFLAGFYSKDQIIESLSTSYLNTWALLLTLLATS-FTAVYTIRMTVLVQTGFVRIQPLTPINENNPAVTSPITRLALGSITAGFIITSYILPTKTPPTTMPLSIKMTALVVTALGIAMALEISKTTQMHI--LTKQTSLSNFSTSLGYFNPLVHRFSMTKFLSGGQKIASHLIDLSWYKMLGPEGLASLQLTASK-ASTTLHSGLTKAYMGS---FALSI--LIILMSMH----------------- +>Peponocephala_electra_melon-headed_whale +----MNENLFASFMVPI-TLGIPITTLIIMFPTMLFPTPS-RLINNRMITIQQWLTKLTSKQLMITHNPKGQTWSLMLISLFFFIASTNLLGMLPHSFTPTTQLSMNLGMAIPLWAGTVFIGFRNKTKMSLAHLLPLGTPTFLIPMLVMIETISLFIQPLALAVRLTANITAGHLLLHLIGSATLALMN-ISLFTALITFIILTLLVILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMI-FTLFALLQLKISKHFYSP-SPKPV-GTKLQKQ-QTP-W-NHTWTKIYLP-LS---------MFANRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQLYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWAKIQFMIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFEEPVYVNL-KHS------MAYPFQLGLQDAASPVMEELLQFHDHALMIVFLISSLVLYIITLMLTTKLTHTNTMDAQEVETIWTVLPAVILITIALPSLRILYMMDEINNPSLTVKAMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMILPMQMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLTSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSMILLTLSFLTNTLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIRPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALLITITLGLYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWFIRYLHANGASMFFICLYAHIGRGLYYGSYMFQETWNIGVLLLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVAVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGALLLILALLTLTLFTPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILIFIPMLQTSKQRSMMFRPFSQLLFWTLIADLLTLTWIGGQPVEHPYIIVGQLASILYFLLILVLMPTVSLIENKLL---KW--------MF--------MINILTLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFMIAPVLALTLALTMWAPLPMPHPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLNTTQEKLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGAFHDPHTPELCTTNLIVKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTAGI-P-PQT--MNP-FISITLLTTLVLSTMIVTISSHWLFAWIGLEMNMMTIIPIMMKKPNPR-ATEASTKYFLTQATASSLLMLAIIINLMHSSQW--TIMKLFDPTASILMTMALAIKLGLSPFHFWVPEVTQGIPLNTGLILLTWQKLAPISILYQISPSINLHLMITM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILLYNPTFTLLNLLIYIMMTFTMFMLLIQNSTTTTLLL---SQTWNTMPIMTTFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPTLMAITALLNLYFYMRLAYSTALTLFPSTNNMKMKW-QFYPTKQMTLL-------PTAIVLSTMLLPLTPTLFTML---MN-LLLTLLTNTTLALLLMFIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLTTMLLTALLLISLLAASLAYEWTQKG--LEWDK-MSLVHINILIAFTVSLTGLLMYRSHLMSALLCLEGMVLSLFILATLTILNTHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIVPTIMLMPLTWLSNSKFIWINTTTHSLLISFTSL-LLLNQFNDNSLNYS-LTFFSDPLSTPLLMLTMWLLPLMLMASQSHLLKEPLARKKLYITMLIMLQILLIMTFTATELIMFYITFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALMYLQNTVGSLNFLLLQYWAQPLS-TSW-----SNTFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTEHMAYPFLALSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFFPLMTTWWLLACLTNLALPPTINLIGELLVIMSTFSWSNLTIILMGTNIVITALYSLYMLIMTQRGKHTHHINNLTPTFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSS-TLLTLLMLITPVMAS---STDFYKN-NKYQHYVKNM-TLLAFITSLIPMMMFIHTNQEMLISNWHWITIHTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLHNTNAWDLQQIFTLNQN-PPILPLMGLTLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQTTMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALTIGCFALTGMPFLTGFYSKDLIIEAATSSYTNAWALLLTLIATS-MTAIYSTRIIFFTLLEQPRFSPLMNINETNPMLINPIKRLLIGSIFAGFILSNSMPPMNTPLMTMPLYLKLTALMVTTLGFILAFEINIYSKNLK--HPHPSDSTKFSTLLGYFPTIMHRLAPHLALTMSQKFATFLLDLTWTEMILPKTTALIQLKAST--LTSNQKGLIKLYFLS---FLITM--TLSMLLF----------NYPE---- +>Ursus_spelaeus_cave_bear +----MNENLFTSFITPT-MMGIPIVLLIIMFPSILFPSSS-RLIDNRLVSVQQWLVRLTSKQMLSIHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVATGFRYKTKASLAHFLPQGTPFPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTS-ISTITACIAFTILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSITILSMV-LTLFIILQLKVSKYKYPE-IPEPK-SLLSSKK-LVP-W-EEKWTKIYLP-LL-SPQR----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASMDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFMIMFIGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSVGSFISLTAVMLMIFMIWEAFASKREVAVVELTSTNIEWLHGCPPPYHTFEEPAYVML-K--------MAYPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISTMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTALMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEEWSASVL----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMLLLLLGLTTNMLTMYQWWRDIIRESTFQGHHTPAVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGACWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYEASFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFLRQLHFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSFIDLPTPSNISAWWNFGSLLGVCLVLQILTGLFLAMHYTSDTTTAFSSITHICRDVHYGWVIRYMHANGASMFFICLFMHVGRGLYYGSYLFSETWNIGIILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAAVHLLFLHETGSNNPSGIPSNSDKIPFHPYYTIKDILGALLLTLALATLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILAIIPLLHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFTILLVLMPIAGIIENNLL---KW--------MF--------MINIISLVVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAMKLFTKEPLRPLTSSTTMFIMAPILALTLALTMWVPLPMPYPLVNMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPTWPLAMMWFISTLAETNRAPFDLAEGESELVSGFNVEYAAGPFALFFLAEYTNIIMMNALTTILFFGAFHSPCMPELYTVNFTVKTLLLTASFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIITASI-P-PQM--MKP-PILIIITSTIILGTTIVLFSSHWLMIWIGFEMNMLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMLGIIINLLHSGHW--TISMIPNPIASTVITIALAMKLGLSPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSINPNLLVAM-AATSVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLTIYIMMTLGTFMLFMYNLSTTTLSL---SHTWNKSPLIASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIIMPMFMAITALLNLYFYMRLTYATALTMFPSANNMKMKW-QFESMKKMIFL-------PPLIVASTMLLPLTPMLSIMN---MN-LILALFTNMLLASLLVLIAFWLPQLNIYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDNLMTMLTMALLLISLLAMSLAYEWAEKG--LEWAE-MPVVYVNIFLAFIVSLMGLLIYRSHLMSSLLCLEGMALSLFVMLTVTVLNNHFTLANMAPIILLVFAACEAALGLSLPVMVSNTYGTDYVQNLNLLQCMLKIIFPTMMLMPLTWASKPNMIWINTTAYSLLISLISL-TYLNQLSDNSLNFS-LLFFTDSLSAPLLALTTWLLPLMLMASQFHLSKETLTRKKLYITMLILLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLHTQNNLGSLNFLMMQYWIQPLP-NSW-----SSIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLNP-LTSFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVVATFSWSNITITLMGTNIIITALYSLYMLITTQRGKCTDHIKSIKPSFTRENALMALHLLPLLLLSLNPKMILGPIY------MNLFTSS-IIMTLLMLMMPIILT---STSTHKN-KFYPQYVKTT-VSYAFMVSTIPMMMFLYSGQEMIISNWHWMTIQTLKLTLSFKLDYFSMIFMPVALFVTWSIMEFSIWYMHTDPNISHFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFIMAMAWFLLNTNAWDFQQIFAIEHE-NLNIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKTIQTATLCLGAMTTLFTAACALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPLTTTALIIGALALTGMPFLTGFYSKDLIIETANTSYTNAWALLTTLIATS-MTAAYSTRIVFFVLLGQPRFNPVIVINENSPLLINSIKRLLLGSIFAGYLIFHNITPTTTPQMTMPHYLKMMALAVTMLGFILALELNSISQTLK--LDYPQNLFKFSIQLGYFPIIIHRLLPMMSLSMSQKMASMLLDMIWLENALPKSISYFQMKSSI--MVSNQKGLIKLYFLS---FMITL--TLSFFVL----------NFHEWLP- +>Moschus_chrysogaster_alpine_musk_deer +----MNENLFASFITPM-ILGLPLATLIIMFPSLLFPTSN-RLINNRLLSLQQWMLQLVSKQMMGIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMILSMF-LTLFIIFQLKISKHNFFH-NPEST-LTKAQKQ-NTP-W-ETKWTKIYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTTTNLEWLNGCPPPYHTFEEPTYINS-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEIETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYMFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSSNPTGITSDTDKIPFHPYYTIKDILGVLLLILILMVLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILILMPLLHMSKQRSMMFRPLSQCLFWTLVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVMMPVASMIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSYTLSTLITTQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPYMPELYTINFIIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IISIIILSTIMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMYSGQW--TVMKLFNPMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVFYQIFPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILPYNPTMTLLNLIIYIIMTSTMFMLFMANSTTTTLSL---SHTWNKAPIMTALALTTLLSMGGLPPLSGFMPKWLIIQEMTKNNSIIMPTFMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFSNTKQMTLL-------PTMTVMSTLLLPLTPILSVLE---MN-LMLALLTNFTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTTALFLILLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTTHSLLISLSSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQYHLSKENLTRKKLFITMLILVQLFLIMTFTATELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYIQNTVGSLNFLMLQYWVQPMP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMFLNP-TTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNLFSSF-ALITLLLLTVPIMMT---SFNTYKT-INYPLYVKMT-ISYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLANLNTWDLQQIFMLNPE-NSNMPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSTMLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGIPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPTTVPQMTMPYYLKMMALTVTILGFILALEINNLTQNLK--FNYPSNMFKFSNLLGYFPTIMHRLAPYLNLTMSQKSASSLLDLIWLENILPKTTSLIQMNMST--MVTNQKGLIKLYFLS---FLITI--LISIILF----------NFHE---- +>Feresa_attenuata_pygmy_killer_whale +----MNENLFAPFMIPI-MLGIPITTLIIMFPTMLFPTPS-RLINNRMITIQQWLTKLTSKQLMTTHNPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNLGMAIPLWAGTVFIGFRNKTKMSLAHLLPLGTPTFLIPMLVMIETISLFIQPLALAVRLTANITAGHLLLHLIGSATLALIS-INLFTALITFIILTLLIILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMI-FTLFALLQLKISKHFYSP-SPKPM-DTKLQKQ-QTP-W-NYTWTKIYLP-LS---------MFANRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQLYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWAKIQFMIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFEEPVYVNL-KYS------MAYPFQLGLQDAASPVMEELLQFHDHALMIVFLISSLVLYIITLMLTTKLTHTNTMDAQEVETIWTVLPAVILIMIALPSLRILYMMDEINNPSLTVKAMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMVLPMQMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSMILLTLSFLTNTLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALLITITLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIICFMRQMMFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWFIRYLHANGASMFFICLYAHIGRGLYYGSYMFQETWNIGVLLLLAVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVAVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGALLLILTLLTLTLFTPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILIFIPMLQTSKQRSMMFRPFSQLLFWTLIADLLTLTWIGGQPVEHPYIIMGQLASILYFLLILVLMPTVSLIENKLL---KW--------MF--------MINILTLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFMIAPVLALTLALTMWAPLPMPHPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLNTTQEKLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYTNIIMMNMFTTILFLGAFHDPHTPELCTTNLIVKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTAGI-P-PQT--MNP-FISITLLTTLVLSTMIVTISSHWLFAWIGLEMNMMAIIPIMMKKPNPR-ATEASTKYFLTQATASSLLMLAIIINLMHSSQW--TIMKLFDPTASILMTMALAIKLGLSPFHFWVPEVTQGIPLSTGLILLTWQKLAPISILYQISPSINLHLMITM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILPYNPTFTLLNLLIYITMTFTMFMLLIQNSTTTTLLL---SQTWNTMPIMTTFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPTLMAVTALLNLYFYMRLAYSTALTLFPSTNNMKMKW-QFYSTKQMTLL-------PTAIVLSTMLLPLTPTLFTLL---MN-LLLTLLTNTTLALLLMLIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLTTMLLSALLLISLLAASLAYEWTQKG--LEWDK-MSLVHINTLIAFTVSLTGLLMYRSHLMSALLCLEGMVLSLFILATLTILNTHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIVPTIMLMPLTWLSKSNFIWINTTTHSLLISFTSL-LLLNQFNDNSLNYS-LTFFSDPLSAPLLMLTMWLLPLMLMASQSHLLKEPLARKKLYITMLIMLQTLLIMTFTATELIMFYITFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALMYLQNTVGSLNFLLLQYWAQPLS-TSW-----SNTFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTEHMAYPFLVLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIAAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFFPLMTTWWLLACLTNLALPPTINLIGELLVIMSTFSWSNLTIILMGANIVITALYSLYMLIMTQRGKHTHHINNLTPTFTREHALMALHIIPLLLLSLKPKIILGPLY------MNLFTSS-TLLTLLMLVAPVMAS---STDFYKN-NKYQHYVKNM-TLLAFITSLIPMTMFIHTNQEMLISNWHWTTIHTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLHNTNTWDLQQIFTLNQN-PPILPLMGLTLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQTTMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALIIGCFALTGMPFLTGFYSKDLIIETATSSYTNAWALLMTLIATS-MTAIYSTRIIFFTLLEQPRFSPLMNINETNPMLINPIKRLLIGSIFAGFILSNSMPPMNTPLMTMPLYLKLTALMVTTLGFILAFEINTYSKNLK--YPYPSDSTKFSTLLGYFPTIMHRLAPHLTLTMSQKFATSLLDLTWTEMILPKTTALIQLKAST--LTSNQKGLIKLYFLS---FLITM--TLSMMLF----------NCPE---- +>Moschus_moschiferus_Siberian_musk_deer +----MNENLFASFITPM-ILGLPLATLIVMFPSLLFPTSN-RLINNRLLSLQQWMLQLASKQMMGIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPWWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMILSMF-LTLFIIFQLKISKHNFFY-NPELT-LTKTRKQ-STP-W-ETKWTKIYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYINS-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEIETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMTLLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYMFLETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGITSDMDKIPFHPYYTIKDILGILLLILILMALVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIFMPLLHTSKQRSMMFRPLSQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVMMPVASMVENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILPSVLLMSGSYTLSTLITTQEQVWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPYMPELYTINFIIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IISIIILSTIMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMYSGQW--TVMKLFNPMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVFYQIFPSIDLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILPYNPTMTLLNLIIYIMMTSTMFMLFMANSTTTTLSL---SHTWNKAPIMTALALATLLSMGGLPPLSGFMPKWLIIQEMTKNNSIIMPTFMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPNTKQMTLL-------PTMTVMSTLLLPLTPILSVLE---MN-LMLALLTNLTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLILLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMLAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNTHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTTHSLLISLSSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQYHLSKENLTRKKLFITMLILLQLFLIMTFTATELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYIQNTVGSLNFLMLQYWVQPMS-NSW-----SDVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMFLNP-TTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNLFSSF-TLITLLLLTVPIMMT---SFNTHKT-INYPLYVKTT-ISYAFITSMIPTMMFIHTGQEMITSNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMYSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLANLNTWDLQQIFMLNPK-DSNMPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSIMLCLGAITTLFTAMCALTQNDIKKSLP---SPHLANWAMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGIPFLTGFYSKDLIIEAANTSYTNAWALLTTLIATS-FTAIYSTRIIFFALLGQPRFSTLITINENNPFLINSIKRLLIGSLFAGFIISNNIPPTTVPQMTMPHYLKMTALAVTILGFILALEINNLTQNLK--FNHPSSMFKFSNLLGYFPTIMHRLAPYLNLTMSQKSASSLLDLIWLENILPKTTSLIQMNMSM--MITNQKGLIKLYFLS---FLVTI--LTSIILF----------NFHE---- +>Phoca_largha_spotted_seal +----MNENLFASFATPT-MMGLPIVILIILFPSILFPSPD-RLINNRLTSIQQWLIQLTSKQMLSIHNHKGQTWALMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMD-ISTATAFITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITILSMI-LTLFITFQLKVSKHYFPT-NPEPK-HTPLLKN-SAP-W-EEKWTKIYSP-LS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFASKREVAAVELTTTNIEWLHGCPPPYHTFEEPTYVVL-K--------MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMYLLMLGLTTNTLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFTGFFWAFYHSSLAPTPELGGCWPPTGITPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFMTISLGIYFTLLQASEYYETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFVRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNSFIDLPTPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYMHVGRGLYYGSYTFTETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFILPFVVLALAAVHLLFLHETGSNNPSGIMSDSDKIPFHPYYTIKDILGALLLILVLTLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIVPLLHTSKQRGMMFRPISQCLFWLLVADLLTLTWIGGQPVEHPYITIGQLASILYFTILLVLMPIASIVENNIL---KW--------MF--------MINIISLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSTTMFIMAPILALALALTMWAPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIMMNIFTTLLFLGAFHNPYMPELYVINFTVKTLALTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIISASI-P-PQT--MKP-PILIIIMSTVMSGTMIVLTSSHWLLTWIGFEMNMLAIIPILMKNHTPR-ATEASTKYFLTQATASMLLMMGIIINLMFSGEW--TISKIPNPVASGLVTIALTMKLGMAPFHFWVPEVTQGISLSSGMILLTWQKIAPLSVLYQISPSINPKLLITM-AITSVLIGGWGGLNQTQLRKILAYSSIAHMGWMAVILTYNPTLMILNLTIYIMMTLSTFMLFMHNSSTTTLSL---SNTWNKLPLMTSLILMLMMSLGGLPPLSGFAPKWMIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTMFPSVNNMKMKW-QFESTKKIILL-------PPLIIISTMLLPMTPMMSILE---MN-MALTLFTNTALASLLVLIAFWLPQLNTYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHTDNLTTMLTMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYANIFLAFIMSLMGLLMYRSHLMSSLLCLEGMMLSLFVMMTVTILNNHFTLASMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTMMLMPLTWMSKPNMIWINTTAYSLLISLVSL-SFLNQLGDNCMSLS-LLFFTDSLSAPLLALTTWLLPLMLMASQFHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLFIQNNMGTLNFLMIQLWAQPLP-SSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITVLLSP-LTSFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQVLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNITIILMGTNIIITALYSLYMLITTQRGKYTYHIKNIKPSFTRENALMTLHLMPLLLLSLNPKIILGPIY------MNLFASS-IITTLSMLTLPIVLT---STSIYKN-KLYPQYVKTT-ISYAFMISMIPTTMFIYSGQEMIISNWHWMTIQTMKLTLSFKLDHFSMIFVPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDVGFIMAMAWFLINLNTWELQQIFISHHN-NLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNTMVQTTTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKVLPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLLTLVATS-MTAAYSTRIMFFALLGQPRFNPMITINENSQLLINSIKRLLLGSIFAGYLISYNITPTSTPQMTMPHYLKLTALTVTLLGFILALELSLTSQSLK--LKYPSNLFKFSNLLGYFPTIIHRYMPMANLSASQKLASTLLDAIWLESALPKSISYFHMKSSV--TISNQKGLIKLYFLS---FIVTL--ILALMMI----------NSHE---- +>Equus_asinus_donkey +----MNENLFASFATPT-MMGLPIVILIIMFPSILFPSSN-RLINNRLISIQQWLVQLTSKQMMTIHNNKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVFMGFRHKTKAALAHFLPQGTPIFLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMD-ISPSTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFINIVSMI-LTLFIVFQLKISKHSYPM-HPEAK-TTKMAKR-LTP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLALPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMIWEAFASKREVSTVELTSTNLEWLHGCPPPYHTFEEPAYVNL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISSMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLVASRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEEWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTLLLALGLLTNILTMYQWWRDIIRESTFQGHHTSIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMLQGLFITISLGVYFTLLQASEYYEASFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHETGSNNPSGIPSDMDKIPFHPYYTIKDILGLLLLVLLLLTLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALIPTLHMSKQRSMMFRPLSQCVFWLLVADLLTLTWIGGQPVEHPYVIIGQLASILYFSLILIFMPLASTIENNLL---KW--------MF--------MINVLLLIIPILLAVAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADALKLFIKEPLQPLTSSTSMFIIAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLIITQEYLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNIFTTTLFLGAFHSPYLPELYSINFTMKTLLLTCSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMLSSI-P-PQT--MNP-LILTIILMTVFLGTMIVMASSHWLMIWIGFEMNLLAIIPILMKKYNPR-AMEASTKYFLTQATASMLLMMAIIINLMHSGQW--TITKVFNPTASIIMTLALAMKLGLTPFHFWVPEVTQGISLTSGLILLTWQKLAPMSILYQISPSINLNILLTM-AVLSILVGGWGGLNQTQLRKIMAYSSIAHMGWMAAILVYNPTLTMLNMLIYIMMTLTMFMLFIHSSSTTTLSL---SHTWNKAPLITTLILITLLSMGGLPPLSGFMPKWMIIQELTKNSSIILPTLMAIMALLNLYFYMRLTYSTSLTMFPSTNNMKMKW-QFE-TKQITLL-------PPLIIASSLLLPLTPMLSILD---MN-LMLTLLTNTLLASLLVLIAFWLPQLNIYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLIMALILISLLAISLAYEWTQKG--LEWTE-MSLAHINIFLAFTVSLVGLLMYRSHLMSSLLCLEGMMLSLFVMATMVVLNTHFTLASMMPIILLVFAACERALGLSLLVMVSNTYGVDHVQNLNLLQCMLKIIIPTIMLMPLTWLSKKNMIWINTTTYSLLISLISL-SLLNQPNNNSLNFS-LMFFSDPLSAPLLVLTTWLLPLMLMASQHHLSKEPLIRKKLYITMLAMLQTFLIMTFTATELISFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALISIQNLTGSLNFLLIQYWNQALP-DSW-----SNIFLWLACMMAFMVKMPLYGLRLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMMLNP-QTNFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSNITIILMGANITITALYSLYMLITTQRGKYTHHINSIKPSFTRENALMALHMTPLLLLSLNPKIILGFTY------MNMFSSL-MLASLSVLTLPIMSS---ILNTHKN-STYPHHVKNI-ISYAFITSLIPTMMFIHSGQETIISNWHWMTIQTLKLSLSFKLDYFSMIFVPVALFVTWSIMEFSLWYMHSDPYITRFFKYLLTFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFIMAMAWFLFNTNTWDLQQIFMLDPN-LTNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQSLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKTGGLFNAMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-LTAVYSTRIIFFALLGQPRFLPLTTINENNPFLINSIKRLLIGSIFAGFFISNNIYPTTIPEMTMPIYMKLTALTVTILGFTLALELSLITHNLK--LEHPTNMFKFSNLLGYYPTIMHRLPPLANLSMSQKSASLLLDSIWLENILPKSISQFQMKTSI--LISTQKGQIKLYFLS---FLITL--TLSMLLF----------NLHE---- +>Equus_grevyi_Grevys_zebra +----MNENLFASFATPT-MMGLPIVILIIMFPSILFPSSN-RLVNNRLISIQQWLVQLTSKQMMAIHNNKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVFMGFRHKTKAALAHFLPQGTPIFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISPSTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFINIVSMI-LTLFIVFQLKISKHSYPT-HPEAK-TTKMTKH-LTP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLALPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMIWEAFASKREVSTVELTSTNLEWLHGCPPPYHTFEEPAYVNL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISSMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLVASRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEEWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTLLLALGLLTNILTMYQWWRDIIRESTFQGHHTSIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMLQGLFITISLGVYFTLLQASEYYEASFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGIILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHETGSNNPSGIPSDMDKIPFHPYYTIKDILGLLLLILLLLTLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALIPTLHTSKQRSMMFRPLSQCVFWLLVADLLTLTWIGGQPVEHPYMIIGQLASILYFSLILIFMPLASTIENNLL---KW--------MF--------MINVLLLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADALKLFIKEPLRPLTSSTSMFIIAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLITTQEYLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNIFTTTLFLGAFHNPYLPELYSINFTIKALLLTCSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMLSSI-P-PQT--MNP-LILTTILMTVFLGTLIVMMSSHWLMIWIGFEMNLLAIIPILMKKYNPR-AMEASTKYFLTQATASMLLMMAIIINLMYSGQW--TITKIFNPTASIIMTSALAMKLGLTPFHFWVPEVTQGISLTSGLILLTWQKLAPMSILYQISPSINLNILLTM-AVLSILVGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLAYNPTLTMLNMLIYIMMTLTMFMLFIHSSSTTTLSL---SHTWNKTPLTTTLILITLLSMGGLPPLSGFAPKWMIIQELTKNSSIILPTLMAIMALLNLYFYMRLTYSTSLTMFPSTNNMKMKW-QFE-TKQIILL-------PPLIITSSLLLPLTPMLSILD---MN-LMLTLLTNTLLASLLVLIAFWLPQLNIYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLIMALILISLLAISLAYEWTQKG--LEWTE-MSLVHINIFLAFTISLMGLLMYRSHLMSSLLCLEGMMLSLFVMATMMVLNTHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGVDHVQNLNLLQCMLKIIIPTTMLMPLTWLSKKNMIWINATTYSLLISLISL-SLLNQPNNNSLNFS-LMFFSDPLSAPLLVLTTWLLPLMLMASQHHLSKEPLIRKKLYITMLAMLQTFLIMTFTATELISFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALISIQNLTGSLNFLLIQYWNQALP-DSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITTMLNP-QTNFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSNITIILMGANITITALYSLYMLITTQRGKYTHHVNNIKPSFTRENALMALHMTPLLLLSLNPKIILGFTY--------MFSSL-MLVSLSVLTLPIMSS---ILNTHKN-STYPHHVKNI-ISYAFITSLIPTMMFIHSGQETIISNWHWVTMQTLKLSLSFKLDYFSMVFVPVALFVTWSIMEFSLWYMHSDPYITRFFKYLLTFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFIMAMAWFLFNTNTWDLQQIFMLDPS-LTNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEINKTTQSLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFNAMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-LTAVYSTRIIFFALLGQPRFLPLTSINENNPFLINSIKRLLIGSIFAGFFISNNIYPTTVPEMTMPTYMKLTALAVTILGFTLALELSLITHNLK--LEHPTNMFKFSNLLGYYPTIMHRLPPFANLSMSQKSASLLLDSIWLENILPKSISQFQMKTSI--LISTQKGQIKLYFLS---FLITL--TLSMLLF----------NLHE---- +>Equus_zebra_mountain_zebra +----MNENLFASFATPT-MMGLPIVILIVMFPSILFPSSN-RLINNRLTSIQQWLVQLTSKQMMAIHNSKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVFMGFRHKTKAALAHFLPQGTPIFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISPSTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFINIVSMI-LTLFIVFQLKISKHSYPT-HPEAK-TTKMTKH-LTP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLALPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMIWEAFASKREVSTVELTSTNLEWLHGCPPPYHTFEEPAYVNL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISSMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLVASRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEEWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTLLLALGLLTNILTMYQWWRDIIRESTFQGHHTSIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMLQGLFITISLGVYFTLLQASEYYEASFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHETGSNNPSGIPSDMDKIPFHPYYTIKDILGLLLLILLLLTLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALIPTLHMSKQRSMMFRPLSQCVFWLLVADLLTLTWIGGQPVEHPYVIIGQLASILYFSLILIFMPLASTIENNLL---KW--------MF--------MINVLLLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADALKLFIKEPLRPLTSSTSMFIIAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLITTQEYLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNIFTTTLFLGAFHNPYLPELYSINFTIKALLLTCSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMLSSI-P-PQT--MNP-LIFTIILMTVFLGTMIVMTSSHWLMIWIGFEMNLLAIIPILMKKYSPR-AMEASTKYFLTQATASMLLMMAIIINLMYSGQW--TITKIFNPTASIIMTSALAMKLGLTPFHFWVPEVTQGISLTSGLILLTWQKLAPMSILYQISPSINLNILLTM-AVLSILVGGWGGLNQTQLRKIMAYSSIAHLGWMTAVLAYNPTLTMLNMLIYITMTLTMFMLFTHSSSTTALSL---SHTWNKTPLTTTLILITLLSMGGLPPLSGFMPKWMIIQELTKNNSIILPTLMAIMALLNLYFYMRLTYSTSLTMFPSMNNMKMKW-QFE-TKQITLL-------PPLIIASSLLLPLTPMLSILD---MN-LMLTLLTNTLLASLLVLIAFWLPQLNIYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLIMALILISLLAISLAYEWTQKG--LEWTE-MSLVHINIFLAFTVSLMGLLMYRSHLMSSLLCLEGMMLSLFVMATMMVLNTHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGVDHVQNLNLLQCMLKIIIPTIMLMPLTWLSKKNMIWINTTTYSLLISLISL-SLLNQPNNNSLNFS-LMFFSDPLSAPLLVLTTWLLPLMLMASQHHLSKEPLTRKKLYITMLVMLQTFLIMTFTATELISFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALISIQNLTGSLNFLLIQYWNQALP-NSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTMLNP-QTNFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSNITIILMGANITITALYSLYMLITTQRGKYTHHINNIKPSFTRENALMALHMTPLLLLSLNPKIILGFTY--------MFSSL-MLISLSVLTLPIMSS---ILSTHKN-STYPHHVKNI-ISYAFTTSLIPTMMFIHSGQETIISNWHWVTMQTLKLSLSFKLDYFSMVFVPVALFVTWSIMEFSLWYMHSDPYITRFFKYLLTFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYSRTDANTAALQAILYNRIGDIGFIMAMAWFLFNTNTWDLQQIFMLNPD-LTNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQSLTLCLGAITTLFTATCALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFNAMPFTTTSLIIGSFALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-LTAVYSTRIIFFALLGQPRFLPLTPINENNPFLINSIKRLLIGSIFAGFFISNNIYPTTVPEMTMPAYMKLTALAVTILGFTLALELSLITHNLK--LEHPTNMFKFSNLLGYYPTIMHRLPPLANLSMSQKSASLLLDSIWLESILPKSISQFQMKTSI--LISTQKGQIKLYFLS---FLITL--TLSMLLF----------NLHE---- +>Cervus_nippon_hortulorum_Ussuri_sika_deer +----MNENLFASFITPM-MLGLPLATLIVMFPSLLFPTSN-RLVNNRLISLQQWVLQLVSKQMMGIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLMHLIGGAALALMN-ISTTMAFITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LALFIIFQLKISKYNFHF-NPELM-LTKTQKQ-NTP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGSLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMFVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGILLLMLFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALISSILILILMPFLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEHPFIIIGQLASILYFFIILVLMPITSTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPVLPELYTINFTMKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFTSSI-P-PQT--MNP-IIFILILSTMMMGTIIVMISSHWLLVWIGFEMNMLAIIPIMMKKHNPR-ATEAATKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMFMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTILVLVTLLSMGGLPPLSGFMPKWMIIQELTKNDSLILPTIMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSILE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVALAGLLMYRSHLMSSLLCLEGMMLSLFVMASLTILNSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNITGSLNFLVLQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMQRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-TLVTLLLLTIPIMTT---SSDNYKT-SNYPLYVKTT-ISYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFALTPN-NSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTIPQLTMPHYLKMMALTVTVLGFILALEISNMTQNLK--FNYSTNIFKFSNMLGYFPTIMHRLAPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQTKMSI--MVTNQKGLIKLYFLS---FLVTI--TISMILF----------NFHE---- +>Equus_hemionus_onager +----MNENLFASFATPT-MMGLPIVILIIMFPSILFPSSN-RLINNRLISIQQWLIQLTSKQMMAIHNNKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVFMGFRHKTKAALAHFLPQGTPIFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISPSTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFINIVSMF-LTLFIVFQLKISKHSYLT-HPEAK-TTKMTKH-LTP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLALPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMIWEAFASKREVSTVELTSTNLEWLHGCPPPYHTFEEPAYVNL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISSMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAIPSLGLKTDAIPGRLNQTTLVASRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEEWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTLLLALGLLTNILTMYQWWRDIIRESTFQGHHTSIVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMLQGLFITISLGVYFTLLQASEYYEASFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFMMTALVIVHLLFLHETGSNNPSGIPSDMDKIPFHPYYTIKDILGLLLLILLLLTLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALIPTLHMSKQRSMMFRPLSQCVFWLLVADLLTLTWIGGQPVEHPYVIIGQLASILYFSLILIFMPLASIIENNLL---KW--------MF--------MINILLLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADALKLFIKEPLQPLTSSTSMFIIAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLIITQEYLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNIFTTTLFLGAFHNPYLPELYSINFTIKALLLTCSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMLSSI-P-PQT--MNP-LILTAILMTVFLGTMIVMMSSHWLMIWIGFEMNLLAIIPILMKKYSPR-AMEASTKYFLTQATASMLLMMAIIINLMHSGQW--TITKVFNPTASIIMTSALAMKLGLTPFHFWVPEVTQGISLTSGLILLTWQKLAPMSILYQISPSINLNILLTM-AVLSILVGGWGGLNQTQLRKIMAYSSIAHMGWMTAILAYNPTLTMLNMLIYIMMTLTMFMLFIHSSSTTTLSL---SHTWNKMPLITTLILITFLSMGGLPPLSGFMPKWMIIQELTKNNSIILPTLMAIMALLNLYFYMRLTYSTSLTMFPSTNNMKMKW-QFE-TKQIILL-------PPLIVASSLLLPLTPMLSILD---MN-LMLTLLTNTLLASLLVLIAFWLPQLNIYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLIMALILISLLAISLAYEWTQKG--LEWTE-MSLVHINIFLAFTVSLVGLLMYRSHLMSSLLCLEGMMLSLFVMATMMVLNTHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGVDHVQNLNLLQCMLKIIIPTIMLMPLTWLSKKNMIWINATTYSLLISLISL-PLLNQPNNNSLNFS-LMFFSDPLSAPLLVLTTWLLPLMLMASQHHLSKEPLIRKKLYITMLTMLQTFLIMTFTATELISFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALISIQNLTGSLNFLLIQYWNQALP-DSW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTLLNP-QTNFMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSSFSWSNITIILMGANITITALYSLYMLITTQRGKHTHHINNIKPSFTRENALMALHMTPLLLLSLNPKIILGFTY--------MFSSL-MLVSLSMLILPIMSS---ILNTHKN-SAYPHHVKNI-ISYAFITSLIPTMMFIHSGQETIISNWHWVTMQTLKLSLSFKLDYFSMVFVPVALFVTWSIMEFSLWYMHSDPYITRFFKYLLTFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFIMAMAWFLFNTNTWDLQQIFMLDPS-LTNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQSLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFNAMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-LTAVYSTRIIFFALLGQPRFLPLTSINENNPLLINSIKRLLIGSIFAGFFISNNVYPTTVPEMTMPTYMKLTALAVTILGFTLALELSLTTHNLK--MEHPTDMFKFSNLLGYYPTIMHRLPPLTNLSMSQKSASLLLDSIWLESILPKSISQFQMKTSI--LISTQKGQIKLYFLS---FLITL--TLSMLLF----------NLHE---- +>Dorcatragus_megalotis_beira +----MNENLFASFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLMNNRLISLQQWILQLISKQMMSIHNSKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASFAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISPTTAFITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LALFIIFQLKISKHSFYY-NPEQM-LMKTPKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLNVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVILISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTLGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDVIRESTFQGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITIALGIYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFVDLPAPSNISSWWNFGSLLGVCLVLQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGIILLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLIMVLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILILMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASILYFTLILVLMPVASTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLTTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTVNFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFTIILTTVLSGTILVMISSHWLLIWMGFEMNMLTIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVTNLFNPMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVFYQISHSINLNLILTL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFMLFMTNSTTTTLSL---SHTWNKTPIITTLVLVTLLSMGGLPPLSGFMPKWMIIQELTKNNSIILPTLMAMTALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQTTFL-------PIMVVMSTMLLPLTPMLSTLQ---MN-LMMALLTNITLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLATSLAYEWTQKG--LEWTE-MSLVYMNIMLAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLVPLTWLSKSNMIWINPTMYSLMISLTSL-LLMNQFNDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESLSRKKLFITMLILLQLFLIMTFTATELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLILQYWVQPMP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLILNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNITPSFTRENALMSLHILPLLLLSLNPKIILGPLL------MNMFSSF-TLVTLLLLTMPIMAT---SFNNYKT-SDYPLYVKTA-ISCAFFTSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGLILAMAWFLTNLNTWDLQQIFMLNPT-NSNLPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSITLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPLLINSIKRLLLGSLFAGFIISNNIPPMTVPQMTMPHYLKTMAMLVTILGFILALEISNMTYNLK--FNYSSNTFKFSNLLGFYPTIMHRLAPYMNLMMSQKSASSLLDLIWLENILPKTTSLIQMKMSI--MVTNQKGLIKLYFLS---FLITI--LISTTLL----------NFHE---- +>Sousa_chinensis_Chinese_white_dolphin +----MNENLFASFMIPV-MLGVPITTLIIMFPTMLFPTPN-RLINNRMIAIQQWLTKLTSKQLMITHSPKGQAWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNLGMAIPLWAGTVFIGFRNKTKMSLAHLLPLGTPTFLIPMLVMIETTSLFIQPLALAVRLTANITAGHLLLHLIGSATLALMN-ISLFTALITFIILTLLIILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMI-FTLFALLQLKISKHFYSP-SPKPV-DTKLQKQ-QTP-W-NHTWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQLYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWTKIQFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFEEPVYVNL-KYS------MAYPFQLGLQDAASPVMEELLQFHDHALMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRMVLPMQMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSMILLTLSFSTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALLITIMLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKILNDAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWFIRYLHANGASMFFICLYAHIGRGLYYGSYMFQETWNIGVLLLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAAVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGALLLILTLLALTLFTPDLLGDPDNYTPANPLSTPAHIKPEWDFLFAYAILRSIPDKLGGVLALLLSILILIFIPMLQTSKQRSMMFRPLSQLLFWTLIADLLTLTWIGGQPVEHPYIIVGQLASILYFLLILVLMPTAGLIENKLL---KW--------MF--------MINILTLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPFADAIKLFTKEPLRPATSSTTMFMIAPVLALTLALTMWAPLPMPHPLINMNLGVLFILTMSSLTVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLNTTQEKLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYTNIIMMNMFTTILFLGAFHDPYMPELCTTNLIVKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTAGI-P-PQT--MNP-FISITLLTTLILSTTIVTISSHWLFAWIGLEMNMMAIIPIMMKKPNPR-ATEASAKYFLTQTTASSLLMLAIIINLMHSSQW--TIMKLFDPTASILMTMALAIKLGLSPFHFWVPEVTQGIPLSTGLILLTWQKLAPISILYQISPSINLHLMITM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILLYNPTLTLLNLLIYIVMTFTMFMLLIQNSTTTTLLL---SQTWNTVPIMTTFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNKTLILPTLMAITALLNLYFYMRLTYSTALTLFPSTNNMKMKW-QFYPTKQMTLL-------PTAIVLSTMLLPLTPAFFILL---MN-LLLTLLTNTTLALLLMLIAFWLPQLNIYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLTTMLLMALFLISLLAASLAYEWTQKG--LEWDK-MSLVHINILVAFTVSLTGLLMYRSHLMSALLCLEGMVLSLFILAALTILNTHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKSNFIWINTTTHSLLISFTSL-LLLNQFNDNSLNYS-LMFFSDPLSAPLLMLTMWLLPLMLMASQSHLLKEPLARKKLYITMLVMLQVLLIMTFTAMELIMFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALTYLQNTVGSLNFLLLQYWAQPLS-TSW-----SNTFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTEHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALIIAAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFFPLMATWWLLACLTNLALPPTINLIGELLVIMSTFSWSNLTIILMGVNIVITALYSLYMLIMTQRGKHTHHINNLTPTFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSS-TLLTLLMLMTPIMAS---STDFYKN-NKYQHYVKNM-TLFAFITSLIPMTMFIHTNQEMLISNWHWITIHTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLHNTNAWDLQQIFTLNQN-PPILPLVGITLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQTMMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALIIGCFALTGMPFLTGFYSKDLIIEAATSSYTNAWALLLTLIATS-MTAIYSTRIIFFTLLEQPRFHPLMNISENNPMLINPIKRLLIGSIFAGFILSNSMPPMNTPLMTMPLHLKLTALMVTILGFILAFEINNYSKNLK--YPYPSNSTKFSTLLGYFPTIMHRLPPHLVLTMSQKFATSLLDLTWTETILPKTMALIQLKAST--LTSNQKGLIKLYFLS---FLITM--ILSMLLF----------NCPE---- +>Hyaena_hyaena_striped_hyena +----MNENLFSSFTTPT-MMGLPIVVLIIMFPSMLFPSPN-RLISNRLVSLQQWLVQLTAKQMLTIHSRKGQTWALMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAATVVVGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGAALALMK-INTSIALITFVVLVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLETSTWSITIMSMV-ITLFIMFQLKISKYTYPW-SPELK-SSATLKQ-PSP-W-EKKWTKIYSP-LS-LPQQ----MFMTRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGSLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMIWEAFASKREVAMVEQTTTNLEWLHGCPPPYHTFEEPTYVSL-K--------MPYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILVLIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMGTRPGLYYGQCSEICGSNHSFMPIVLELVPLTYFEKWSMTML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTLLLTLGMTTNLLTMYQWWRDVIRESTFQGHHTPIVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKQMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLKYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIVNESFIDLPTPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHAGRGMYYGSYTFSETWNIGILLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAIIHLLFLHETGSNNPSGMTSDTDKIPFHPYYTIKDILGLLLLILMLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAVVPLLHTSKQRGMMFRPISQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASIMYFSIILILMPISGIIENHLL---KW--------MF--------ALNILSLTIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPFGLLQPIADALKLFTKEPLRPLTSSISMFIMAPILALSLALIMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLAALITTQEHIWLVLPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNSLTTILFFGAFHNPYMPELYTINFTTKTLLLTTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIITASI-P-PQM--MKP-PILITIMFTVIAGTTIVLTSSHWLMIWIGFEMNLLAIIPILMKKHNPR-STEAATKYFLMQATASMLLMMGIIINLLHSGQW--TMPKNPNPMATTMVTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAPLSVLYQISPIINPNLLMPM-AIMSVLIGGWGGLNQTQLRKILAYSSIAHMGWMAAITPYNPTMMILNLTIYIIMTLTTFMLFMHNSSTTTSSL---SQTWNKTPLITSLILTLMLSLGGLPPLSGFTPKWMIIQELTKNEMIIIPTMLATTALLNLYFYMRLTYATALTMFPSTNNMKMKW-QFNPTKKMILL-------PPLTVLSTLLLPLTPLMSILD---MN-MMMTLLINTTLSALLVLIAFWLPQLNVYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLSTMLTMALLLISLLAASLAYEWTQKG--LEWSE-MSIVYINIFLAFTVSLLGLLVYRSHLMSSLLCLEGMMLSLFIMMTVVILNNHFTLANMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTMMLIPLTWLSKPTMIWINSTAHSLLISLISL-SYLNQFNDNSLNFS-LLFFSDSLSAPLLALTTWLLPLMLTASQYHLSKETTTRKKLYITMLTFLQLFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQTERLNAGLYFMFYTLVGSLPLLVALLYIQNTTGSLNFLIAQYWVKPIS-TTW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITVLLNP-LTGQMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLANLALPPTINLLGELFVVMASFSWSNITIALMGTNIIITALYSLYMLITTQRGKQTSHIKNIKPSFTRENALMALHLLPLLLLSLNPKIVLGPIY------MNLFNSL-ITTAMFILLLPIIMT---STQVYKN-NLYPNYVKTT-TSYAFAIITIPALMFIYSGQETIISNWHWMTIQTLKLSMSFKLDYFSIIFVPVALFVTWSIMEFSMWYMHADPHINRFFKYLLMFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRVGDVGFILAMAWFLTNSNTWELQQIFITKHE-NLNTPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQSKTAQTLTLCLGATTTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKSMPFTTTSLIVGSLALTGMPFLTGFYSKDLIIEAANMSYTNAWALLMTLIATS-LTAVYSTRIMFFALLEQPRFNPLNLINENNPFLINSIKRLLVGSILAGYLISHNIPPMTTPQMTMPYYLKLTALAVTITGFVLALELNLMTKNLK--LNPASSMFKFSNLLGYFPTITHRSLPLASLTMGQKSASTLLDLIWLENVLPKSISHFQMKSSI--IVSNQKGLIKLYFLS---FMITL--TISLLLL----------NYHE---- +>Tarsius_dentatus_Dians_tarsier +----MNENLFASFITPT-MMGLPVVMLIIMFPTMLYPTSD-RLINNRLISLQQWLIQLVTKQMMMMHNNKGQTWSLMLISLILFIGSTNLLGLLPHSFTPSTQLSMNLGMAIPLWAGAVITGFRHKTKASLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLSS-ISSIAASTTFIILILLTILEMAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTILSTT-LTLFILFQLKISKTMYPL-NPNLK-TMKMQTH-KTP-W-ELKWTKIYSP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFTLHPTWAKTHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFMVWEAFASKREVLAVELPNTNLEWLHGCPPPYHTFEEPTYVKA-Y--------MSHPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINSPSLTIKTMGHQWYWSYEYTDYEDLNFDSYMVPTADLKPGELRLLEVDNRVVLPMEIPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLMSTRPGLYYGQCSEICGANHSFMPIVLELVPLKHFEDWLTSMI----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSSLLLTLGLITNTLTMYQWWRDIIREGTFQGHHTSIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKQMLQALLITIILGTYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNTRKTHPIMKIINHAFIDLPAPSNISAWWNFGSLLGICLGVQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFVVTALVMVHLLFLHETGSNNPSGITSDSDKIPFHPYFTIKDILGLAILILALMLLTLFTPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIIPLLHMSKQRSMMFRPLSQCLFWILVADLLTLTWIGGQPVEHPFIIIGQTASILYFTIILILMPLTNLMENKML---KW--------MF--------MINLLTLIIPVILAMAFLTLAERKVLGYMQLRKGPNIIGPYGLLQPFADAMKLFIKEPLQPLTSASLLYIIAPTLALALALIMWIPMPMPYPLLNMNLSVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTVSYEVTLAIILLAVLLMNGSFTLMSLILTQEYMWLIMPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIIMMNALTTTIFLGALHNTIMPQMYTINFMVKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISMPILMCSI-P-PHQ--MKP-IIFSSIFLTLFSGTLITMLSSHWLLVWIGLEMSMLAITPLLIKKANPR-STEAATKYFLIQATASMILIMSVIINMSYSGQW--TILNKYNNLSSMMVLVALMMKLGLAPFHFWVPEVTQGVSLVSGLLLLTWQKLAPISILHQINMILDLTPLLLI-ALTSITLGGWGGLNQTQMRKIMAYSSIAHMGWMVAILKYNSSIMILNLLIYIILTVSLFSMLYILSSTTILTT---SHSWNKTPLVPSLMLLTLLSLGGLPPLTGFLPKWAVIQELIKNNSILIPTLMAITALLNLYFYMRLIYSTTLTMFPTNNNTKMKW-QFEKMKPMLMV-------PILTTLSTLLLPLSPVMLPMG---MN-LIISLITNTTLALLLVTIAFWLPQLNMYTEKSSPYECGFDPTESARLPFSMKFFLIAITFLLFDLEIALLLPIPWATQTMNLGLVLMVAMALITILALGLTYEWLQKG--LEWNE-MPSIYMNLIIAFLSSLLGMLMYRSHLMSSLLCLEGMMLSMFIMTSLTILNLHFTLANMIPIILLVFAACEAAIGLALLVMVSNTYGLDYVQNLNLLQCMLKIILPTLMIFPLTWYSKKHNIWINTTTHSLMISAITL-SLLNCPYANTMNFS-LTFFTDSLSTPLIILTTWLFPLMLLASQNHLSKESLTRKKLYISMLTLLQMFLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLIALIYLQKFLGSLNLMINPLIIQHAT-KSW-----SNDTLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRMTIILEP-MTKYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFIGATTLMIAHGLTSSLLFCLANTNYERVHSRTMTLARGLQTLLPLAATWWLLASLANLALPPTINLIGELTVMMASFSWSHLTIILMGVNMIITALYSLYMLTTTQRGKYTYHINYINPSFTRENTLMIMHILPIILLSISPKLIMGYMY------MNLFPSL-ILLSLMLLIIPFMLS---ATKKYDH-NTYPNYVKNS-IACAFMASLIPTLMFLHTGKEMIISNWHWMTIQTMKFSMSFKMDYFSMIFVPVALFVTWSIMEFSMWYMHSDPLIHRFLKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVVAMAWFLTYSNSWDFQQMFSLYSN-SDTLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLLEMNKMIQTITLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLLKPMPFTASSLLIGSLALTGMPFLTGFYSKDLIIEAANMSYTNAWALSVTLIATS-LTAVYSTRIIFFALLGQPRFLPPTNINENNPLLMNPIKRLALGSIFAGFIISNNITPTTIPQMTMPWYLKFSALIVTILGFTLAMELNTLSSYLK--LKYPTQPILFSNQLGFFPTTAHRLYPLLNLNISQKMASSLLDLVWIEKSMPKSTAETHMAAST--TTSNQTGLIKLYFMS---FLITL--VLGMYLVL----------------- +>Bubalus_depressicornis_lowland_anoa +----MNENLFTSFITPM-ILGLPLATLIVLFPSLLFPTPN-RLVSNRLISLQQWMLQLVSKQMMGIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISVTTALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LALFIIFQLKISKHSFYL-NPEPT-PTKTPKQ-NTP-W-ETKWTKIYLP-LS-SPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVSTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGSRNHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG---MTNIRKSHPLMKILNNAFIDLPAPSNISSWWNFGSLLGICLIMQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGMYYGSYTFMETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDTDKIPFHPYYTIKDILGALLLILALMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPFSQCLFWILVANLLTLTWIGGQPVEHPYIIIGQLASITYFLLILVLMPAASMIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSTSMFILAPILALGLALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLIITQEQTWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTAILFLGTSHNPYMPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVSLPILLSSI-P-PQT--MNP-IIFFIILSTVMMGTIIVMISSHWLLIWIGFEMNTLAIIPIMMKNHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLTIYIIMTSTMFMLFMANSTTTTLSL---SHTWNMMPIMTVLILMTLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLFFYMRLAYSTTLTMFPSTNNMKMKW-QFSLTKQTTLL-------PTMVVLSTMLLPLTPMLSLLE---MN-LMLALLTNFTLATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIILLAVSLAYEWTQKG--LEWTE-MSLVYMNIMTAFTISLVGLLMYRSHLMSSLLCLEGMMLSLFVMAALTILNSHFTLANMMPMILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLKCMLKYIIPTMMLMPLTWLSKNNMIWINSTTHSLLISLTSL-LLMNQFGDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITTLILLQLFLIMTFTAMELTFFYILFEATLAPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALVYIQNTVGSLNFLMLQYWAQPMP-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELLVVMSTFSWSNTTIILMGANMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSL-MLTTLFLLTMPIMTT---SLNTYKN-PNYPFYVKTA-ISCAFITSMIPTMMFIHTGQEMVISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRIGDIGFILAMAWFLANLNTWDLQQIFMLKPD-NSNVPLMGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTTIYSTRIIFFALLGQPRFPTSITINENNPLLINSIKRLLIGSVFAGFIISNSIPPMTIPQMTMPYYLKTAALMVTVLGFILALEVSNMTQNLK--FNYPSNAFKFSNMLGYFPVIMHRLASYTNLTMSQKLASSLLDLIWLENILPKTTSLIQMKASI--TVTNQEGLIKLYFLS---FLITI--IISMALF----------SFHE---- +>Philantomba_monticola_Blue_duiker +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSS-RLVNNRLISLQQWLLQLISKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTLLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMILSMF-LTLFIIFQLKISKHNFYF-NPELT-LTKTPKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNETWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYINL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFVDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILTLMILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPMASAIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPVLALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQMWLIFPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYLPELYAVNFTVKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFLIILMTVMLGTMIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASLLMTMALAMKLGMAPFHFWVPEVTQGIPLFSGLILLTWQKLAPMSVLYQISPSINLDLILTL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPIMTVLILITLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTLMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFSTTKQMTFL-------PTMVVLSTMLLPLTPVLSILE---MN-LMLALLTNLTLATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLSTMLTMALFLLFLLAVSLAYEWSQKG--LEWTE-MSLVFMNIMMAFAVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLANMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIISTMMLMPLTWLSKNNMIWINSTVHSLLISLTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQNHLSKENLTRKKLFITMLILLQLFLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALIYIQNTMGSLNFLILQYWAQPMS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLLLNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNILPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLLLLTMPIMMT---SSYTYKT-SNYPLYVKTT-ISYAFLTSMIPTMMFIHSGQEAVISNWHWLTMQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPD-NSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAVYSTRIIFFALLGQPRFPTLITINENNSSLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPYYLKMTALAVTVLGFILALEVSNMTHNLK--FNYPSNAFKFSNLLGYYPMIIHRLTPYLNLTMSQKSASSLLDLIWLENILPKTTSLIQMKMST--MVTSQKGLIKLYFLS---FLITI--LISMILF----------NFHE---- +>Philantomba_maxwellii_ +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLVNNRLVSLQQWLLQLISKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYF-NPEPT-LTKTPKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFVDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYAFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILALMILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPFLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPVASTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPVLALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYLPELYTVNFTVKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFFIILMTVMLGTIIIMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLDLILSL-SVLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTVLILITLLSMGGLPPLSGFMPKWMIIQEMTKNNNIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSILE---MN-LMLALLTNLTLASLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLAASLAYEWTQKG--LEWTE-MSLVFMNIMVAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTMYSLLISLTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQNHLSKENLTRKKLFITMLILLQLFLIMTFTATELILFYVLFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALIYIQNTVGSLNFLILQYWTQPMS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLLLNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLIMTQRGKYTHHINNILPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLLLLTMPIMMT---SSYTYKT-SNYPLYVKTT-ISYAFLTSMIPTMMFVHSGQEAVISNWHWLTMQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLANLNTWDLQQIFMLNPD-NSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAVYSTRIIFFALLGQPRFPTLITINENNPFLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPYYLKMTALAVTVLGFVLALEISNMTHNLK--FNYPSNAFKFSNLLGYYPTIIHRLTPYLNLTMSQKSASSLLDLIWLESILPKTTSLIQMKMST--MITSQKGLIKLYFLS---FLVTI--LISTILF----------NFHE---- +>Camelus_ferus_Wild_Bactrian_camel +----MNENLFASFITPT-VMGLPIVILIIMFPSMLFPAPF-RLINNRLISLQYWLIRLTSKQMMTIHNHKGQTWSLMLMSLIMFIGTTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLALMS-INTPTALITFIVLILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSML-MTLFVLFQLKISKHMYLS-APSPK-SNKMRKQ-KTP-W-ETKWTKIYLP-LS-LPQQ----MFITRWLFSTNHKDIGTLYLLFGAWAGMVGMGLSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFMHWFPLFSGYTIDDTWAKIQFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSVGSFISLTAVVLMVFIVWEAFASKREVTTVELTATNLEWLHGCPPPYHTFEEPTYINL-K--------MPYPFQLGFQDATSPIMEELLYFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPVLTVKTIGHQWYWSYEYTDYETLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLVTSEDVLHSWAVPSLGLKTDAVPGRLNQITLMSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFEEWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSSILLLLGLVTNMLTMYQWWRDVVRESTFQGHHTPAVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRAHMLQALFITIALGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLTVCFLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNTRKSHPLLKIVNDAFIDLPAPSNISSWWNFGSLLGICLIMQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLYIHVGRGLYYGSYTFLETWNVGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVAVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGALLLVLILLILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALIPMLHTSKQRSMMFRPISQCLFWVLVADLLTLTWIGGQPVEPPFIVIGQAASILYFSLILILMPVAGIIENRIL---KW--------MF--------MVNTLTLIVPILLAVAFLTLVERKILGYMQLRKGPNVVGPYGLLQPIADAIKLFTKEPLRPATSSVTMFIIAPVLALTLALTMWIPLPMPHPLINMNLGVLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHMWMIVPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFMAEYANIIMMNAFTTILFFGAFHNPYMPELYTANFVAKTLLLTATFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPISTAGI-P-PQT--MNP-LILGIILLTIMAGTLIVMISSHWLFIWIGFEMNMLATIPILMKNFSPR-SIEASTKYFLTQATASMLLMLGVIINLLYSGQW--TTTKMFNQTSSIIITTALTMKLGLAPFHFWVPEVTQGIPLMSGLILLTWQKLAPLSVLYQIAPSINLNMLLTM-SLLSIMVGGWGGLNQTQLRKIMAYSSIGHMGWMTAIMVYNPTMAMLYLLMYLTMTLTMFMLFMINSTTTLLSL---SHTWNKTPIITMLVLTVMMSMGGLPPLSGFMPKWMIIQELTKNDNIILPTLMAMMALLNLYFYMRLAYSTALTMFPSSNNMKMKW-QFEDTKRMTSL-------PIMIVLSTMILPLTPMLSVLY---MN-LMLALFTNTALASLLVLIAFWLPQLYIYAEKTGPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWSTQTNYLYTMLTMALLLILLLAASLAYEWTQGG--LEWTE-MSMVYMNIILAFTMSLAGLLMYRSHLMSSLLCLEGMMLSLFVMASLMILNNHFTLASVMPIILLVFAACEAALGLALLVMVSNTYGTDYVQNLNLLQCMLKIIFPSIMLMPLTWLSKNNMIWINPTVYSLLISLISL-STLNQYSDISTNFS-LLFFSDALSAPLLVLTTWLLPLMLIASQSHLSKEPLTRKKVYITMLILLQVLLIMTFTASELIMFYVLFEATLVPTLIIITRWGSQAERLNAGSYFLFYTLSGSLPLLVALVYIQNTTGSLNFLIMQYWNQPLM-DSW-----SNALLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRLTTMLNP-LTEYMAYPFLMLSLWGMIMTS--SICLRQTDLKALIAYSSVSHMALVIVAILIQTPWSYMGATTLMVAHGLTSSMLFCLANTNYERTHSRTMILARGLQTLLPLMAMWWLLASLANLALPPTINLLGELFVVMSAFSWSNITIILMGANMMITALYSLYMLIMTQRGKHTHHINNIKPTYTRENTLMALHMLPLLMLSLNPKIIMGLTY------MNMFATF-TLLTLFMLTLPILMT---ASNTYNN-NQYPMYVKNI-IACSFAVSLVPTMMFIHSNQEMVISNWHWMTVHTLKISLSFKMDYFSMMFMPIALFVTWSIVEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFVASMAWFLSNLNAWELQQIFALTQN-CPTAPLMGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNKTAQTLTLCLGAITTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIVGSLALTGIPFLTGFYSKDMIIETANTSYTNAWALFITLIATS-LTAVYSTRIIFYALLNQPRFPPLILINENNPLLINSIKRLLVGSIFAGFLISYNIPPMTLPQMTMPLHLKLTALAVTIMGFMLAMEINTMTQNLK--LTRPSKTFKFSNSLGFFPTIMHRLIPYLSLLTSQKSASVLLDLLWLEAALPKTIALIQVKASM--LVSDQKGLIKLYFLS---FLITL--ILIAILF----------NYPA---- +>Gallus_gallus_chicken +----MNLSFFDQFSSPC-LLGIPLILPSLLLPALLLPSPGNRWINNRLSTIQLWFTHLITKQLMTPLNKAGHKWALLLTSLILMLLSINLLGLLPYTFTPTTQLSMNMALALPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALIMIETTSLLIRPLALGVRLTANLTAGHLLIQLISTATIALLP-MMPSISALTALILFLLTILEVAVAMIQAYVFVLLLSLYLQENIMPQLNPNPWFSIMLLTW-FTFSLLIQPKLLSFTLTN-NPANK--ITTTKP--TP-W-TWPWT--------------M--TFINRWLFSTNHKDIGTLYLIFGTWAGMAGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFH-YLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVAYYAGKKEPFGYMGMVWAMLSIGFLGFIVWAHHMFTVRMDVDTRAYFTSATMIIAIPTGIKVFSWLATLHGGTIKWDPPMLWALGFIFLFTIGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGFTLHPSWTKAHFGVMFTGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNTLSSIGSLISMTAVIMLMFIVWEAFSAKRKVLQPELTATNIEWIHGCPPPYHTFEEPAFVQV-QE-------MANHSQLGFQDASSPIMEELVEFHDHALMVALAICSLVLYLLTLMLMEKLS-SNTVDAQEVELIWTILPAIVLVLLALPSLQILYMMDEIDEPDLTLKAIGHQWYWTYEYTDFKDLSFDSYMTPTTDLPLGHFRLLEVDHRIVIPMESPIRVIITADDVLHSWAVPALGVKTDAIPGRLNQTSFITTRPGVFYGQCSEICGANHSYMPIVVESTPLKHFEAWSSLLSS---------MAHQAHSYHMVDPSPWPIFGAAAALLTTSGLIMWFHYSSTTLLTMGLLSMLLVMLQWWRDVVRESTFQGHHTPTVQKGLRYGMILFITSEAFFFLGFFWAFFHSSLAPTPELGGQWPPTGVKPLNPLEVPLLNTAILLASGVTVTWAHHSITEGNRKQAIHALTLTILLGFYFTALQAMEYHEASFSIADSVYGSTFFVATGFHGLHVIIGSSFLTVCLLRLIKFHFTPNHHFGFEAAAWYWHFVDIIWLFLYMSMYWWGS-MAPNIRKSHPLLKMINNSLIDLPAPSNISAWWNFGSLLAVCLMTQILTGLLLAMHYTADTSLAFSSVAHTCRNVQYGWLIRNLHANGASFFFICIFLHIGRGLYYGSYLYKETWNTGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEWAWGGFSVDNPTLTRFFALHFLLPFAIAGITIIHLTFLHESGSNNPLGISSDSDKIPFHPYYSFKDILGLTLMLTPFLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLIPFLHKSKQRTMTFRPLSQTLFWLLVANLLILTWIGSQPVEHPFIIIGQMASLSYFTILLILFPTIGTLENKML---NY--------MT-LPTLTNLLIMTLSYILPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPFLFIITPILALLLALTIWVPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIMLSGNYTLSTLAITQEPIYLIFSAWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIMLMNTLTTVLFLNPSFLNLPPELFPIALATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISYAGL-P-PI---MNP-HAKLICTVSLIMGTSITISSNHWILAWTGLEINTLAIIPLISKSHHPR-AIEATIKYFLTQSTASALILFSSMTNAWSTGQW--DITQLNHPTSCLMLTMAIAIKLGLVPFHFWFPEVLQGSSLITALLLSTLMKLPPITLLLLTSQSLNTTLLTLL-AISSTLIGGWMGLNQTQTRKILAFSSISHLGWMIMIISYNPQLTILTFILYTIMTSTVFLSLAQIKVLKLSTL---LISWTKTPMLNATVMLTLLSLAGLPPLTGFMPKWLIIQELTKQEMTPMATIITMLSLLSLFFYLRLAYHSTITLPPNSSNHMKLW-RTNKTLNTP-T-------AILTALSTTLLPLSPLIITML---MNTLTFMLSLSFLLSAALTTMNFWLAQMAPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQLAHPMMTLTWATTIIALLTFGLIYEWTQGG--LEWAE-MSPLHFSFYSAFTFSSLGLAFHRTHLISALLCLESMMLSMFIPLSIWPVENQTPSFALVPILMLAFSACEAGTGLAMLVASARTHGSDHLHNLNLLQCMLKIILPTIMLLPTALLSPAKSMWTNTTMYSLLIASISL-HWLTPSYYPTKTLT-LWTGMDQISTPLLVLSCWFLPLMIMASQGHLQHEPHKRKRMFISTLIIIQPFIILAFSATELMLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVSILYLHTNTGTLHLPIIKLTHPNLP-ASW-----TSLLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTLLMEP-VSNFLHYPFLTLALWGALMTS--SICLRQTDLKSLIAYSSVSHMGLVIAASMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILILTRGLQPLLPLMSVWWLLANLTNMALPPTTNLMAELTIMVALFNWSSPTIILTGTATLLTASYTLYMLLSTQRGTLPSHITTTPNSNTREHLLMTLHIIPMLTLILKPELISGTPL---ME-TPLLLNTLTTLTLLTLLTPIILPP-LL-NLKNS----PMSITKT-IKTAFLISLIPTTIFIHSGAESIATHWEWQFIPNFKIPISLKMDMYSMMFFPIALFVTWSILEFATWYMASEPFITKFFTYLLTFLIAMLTLTIANNMFLLFVGWEGVGIMSFLLIGWWQGRAEANTAALQAMIYNRIGDIGLILSMAWLASSLNTWEIQQITHPNQT--PTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPFLSSNKTALTTCLCLGALSTLFAATCALTQNDIKKIIAFSTSSQLG--LMMVTIGLDLPQLAFLHISTHAFFKAMLFLCSGLIIHSLNGEQDIRKMGCLQKTLPMTTSCLTIGNLALMGTPFLAGFYSKDLIIENLNTSYINTWALSLTLLATS-FTATYSLRMTLLVQTGHTRTPSNHPINENTPPAILPIMRLALGSIMAGLLISSLILPPKTPPMTMPTITKTAAIIVTTLGIILALELSSLSYSLT--PPKHNPLMNFSSSLGYFNPLTHRISPSILLHTGQKIASHLIDMAWYKKMGPEGLANLHLTMTK-ISTTLHTGLIKSYLGS---FALTI--LTTILLIQK---------------- +>Cephalorhynchus_heavisidii_Heavisides_dolphin +----MNENLFAPFMIPV-VLGFPITTLIIMFPTMLFPTPN-RLINNRVIAIQQWLTKLTSKQLMTTHNPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNLGMAIPLWAGTVFIGFRNKTKMSLAHLLPLGTPTFLIPMLVMIETISLFIQPLALAVRLTANITAGHLLLHLIGSATLALTN-ISLFTALITFTVLTLLVILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLLTILSMI-FTLFALLQLKISKHFYSP-SPKPM-DTNLQKQ-QTP-W-NYTWTKIYLP-LS---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQLYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIILANSSLDIILHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNPTWAKIQFMIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFEEPVYVNL-KYS------MAYPFQLGLQDAASPVMEELLQFHDHALMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTVLPAVILIMIALPSLRILYMMDEINNPSLTVKAMGHQWYWSYEYTDYENLNFDSYMIPTSDLKPGELRLLEVDNRMVLPMQMTIRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLENFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSAFLMTSGLIMWFHFNSMILLTLSFLTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALLITITLGLYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIICFMRQMMFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKILNDAFIDLPTPSNISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTSTAFSSVAHICRDVNYGWFIRYLHANGASMFFICLYAHIGRGLYYGSYMFQETWNIGVLLLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAAVHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGALFLILALLALTLFAPDLLGDPDNYTPANPLSTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILIFIPMLQTSKQRSMMFRPFSQLLFWTLIADLLTLTWIGGQPVEHPYIIVGQLASILYFFLILVLMPTVSLIENKLL---KW--------MF--------MINILTLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFMIAPVLALTLALTMWAPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLNITQEKLWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGAFHDPYTPELCTTNLIAKSLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI-P-PQT--MNP-FVSITLLTTLVLSTTIVTISSHWLFAWIGLEMNMMAIIPIMMKKPNPR-ATEASTKYFLTQATASSLLMLAIIINLMHSSQW--TIMKLFNPTASILMTLALAIKLGLSPFHFWVPEVTQGIPLSTGLILLTWQKLAPMSILYQISPSINLHLMITM-SFLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILLYNPTLTMLNLLIYIVMTFTMFMLLIQNSTTTTLLL---SQTWNTMPIMATFTMLTLLSMGGLPPLTGFMPKWMIIQELTKNDTLILPILMATTALLNLYFYMRLTYSTALTLFPSTNNMKMKW-QFYPTKQMTLL-------PTAIVLSTMLLPLTPTLFVLL---MN-LLLTLLTNMTLALLLMLIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLTTMLLTALFLISLLAASLAYEWTQKG--LEWDK-MSLVHINILIAFTVSLMGLLMYRSHLMSALLCLEGMVLSLFILAALTILNTHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKSNFIWINTTTHSLLISFTSL-LLLNQFIDNSLNYS-LTFFSDPLSAPLLMLTMWLLPLMLMASQSHLLKEPLARKKLYITMLVMLQTLLIMTFTAMELIMFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALTYLQNTVGSLNFLLLQYWAQPLS-TSW-----SNIFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSILNP-LTEHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVIAAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFFPLMATWWLLACLTNLALPPTINLIGELLVIMSTFSWSNLTIILMGVNIVITALYSLYMLIMTQRGKHTHHINNLTPTFTREHALMALHIIPLLLLSLNPKIILGPLY------MNLFTSS-TLLTLLMLIAPIMAS---NTDFYKN-NKYQHYVKNM-TLFAFITSLIPMMMFIHTNQEMLISNWHWITIHTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGFLLSMAWFLHNSNAWDLQQIFTLNQN-PPILPLMGLTLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPMTENNKFIQTMMLSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTLGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALIIGCFALTGMPFLTGFYSKDLIIEAATSSYTNAWALLLTLIATS-MTAIYSTRIIFFTLLGQPRFPPLMNINETNPMLINPIKRLLIGSIFAGFILSNNMPPMNIPLMTMPLYLKLTALMVTILGFILAFEINTYSKNLK--YPHSPNTTKFSTLLGYFPTIMHRLPPHLILTMSQKFATSLLDLTWTETILPKTTALIQLKAST--LTSNQKGLIKLYFLS---FLITM--TLSMLLF----------NYPE---- +>Scapanulus_oweni_Gansu_mole +----MNENLFASFITPT-MMGLPIVILIIMFPSMMFPTPN-RLINNRLVSIQQWLVQLTSKQMMAIHNTKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLPLVPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTATALITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILATI-MTLFILFQLKVSKYIYPS-SPELK-SMKSLKY-NTP-W-ETKWTKIYSP-LS-LPLQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGALMGDDQIYNVIVTAHAFVMIFFMVMPILLGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIFGGFVHWFPLFTGYTLSDTWAKIHFAIMFVGVNITFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMVWEAFASKREVSTVELTTTNIEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQFGFQDATSPIMEELLHFHDHALMIAFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKHFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSSTLLCMGLLANLLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTHELGGFWPPAGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQALFITIALGLYFTVLQAAEYYEAPFTISDGVYGSTFFMATGFHGFHVIIGTTFLTVCFIRQLKYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNSSFIDLPAPSNISSWWNFGSLLGICLVLQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIVLALAGVHLLFLHETGSNNPSGLSSDSDKIPFHPYYTIKDILGALILVMALSSLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILALMPFLHTSKQRSMMFRPISQCLFWLLVADLFTLTWIGGQPVEHPFIIIGQLASILYFMLILVLIPAASLVENNLL---KW--------MF--------MVNLLSLIVPILLAVAFLTLIERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPSTSSISMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFSLSNLIITQEYTWLLISSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNVLTTILFLGAFHNPYMPEMYSINFMIKAMMLTISFLWVRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHMSLPIFLSGV-P-PQS--MNP-MVLLVISFTVILGTMIVLISSHWLMIWIGFEMNMMAIIPILMKNFNPR-SMEAATKYFLTQATASMLLMLAIIINLMYSGQW--TSTEMSNTTASMMMTIALAMKLGMAPFHFWVPEVTQGVSLTSGMVLLTWQKVAPLTVMIQMANSINTNILLMM-AILSIAVGGWGGLNQTQLRKIMAYSSIAHMGWMAAILTYNTSLTTLNLIIYIMMTLTMFMLLHLNSSTTALSL---SHLWNKMPLLSTLILLTLLSLGGLPPLSGFMPKWMIINEMTKNNSVILPTLMAIMALLNLFFYMRLTYSTSLTLFPSTNNMKMKW-QFEINKKVPLL-------SPLIILSTLMLPMTPMLTVLN---MN-MLLTITVNTMLSSILVLIAFWLPQLNTYAEKSSPYECGFDPMGSARIPFSMKFFLVAITFLLFDLEIALLLPLPWASQMNDVNTVLTMALILISLLALSLAYEWTQKG--LEWAE-MSLVSLNIIIAFSISLLGLLMYRSHLMSSLLCLEGMMLSLFILGTIMILNFHFTLASMIPIILLVFAACEAAVGLSLLVMVSNTYGVDYVQNLNLLQCMLKIIIPTTMLLPLVWLSKNSLIWINTTTYSLLISLLSL-LYMNQHNEYSLNMS-ITFFSDPLSAPLLALTTWLLPLMLMASQSHLSNEHITRKKLYISMLILLQIFLVMTFTATELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALTYIQNAVGSLNIMLMQIFSTPMP-DQW-----SSALLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITMILSP-YTSFMAFPFLALSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSYMGATALMIAHGLTSSMLFCLANTNYERTHSRTMILARGLQTLLPLMAAWWLVASLTNLALPPTINLIGELLIMLSSFSWSNLTMILMGLNMVITALYSLYMLIQTQRGKYTHHVININPSFTREHALMVLHMIPLLLLSLNPKIILGTIY------MNLFSSF-LILSLLILTLPVLMT---LTNKYEK-STYPKYVKTT-ISYAFMISMIPTLMFIHSGQEAIISNWHWMTIHSVKLSLSLKLDYFSMTFVPVALFVTWSIMEFSMWYMHSDPNINRFFKYLFMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFVLSMAWFLFNSNSWELQQIFMTENG-QNILPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNTTIQTLTLCLGAMTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLYKTMPFTTTALITGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATS-LTAVYSTRIMFFALLGQPRYSTMILINENNPSMMNPIKRLLIGSIFAGFMISNNLIPMNVPQMTMPAYLKLTALAVTIMGFMLAMELNTMTHYFK--FPYPTNAHKFSNQLGFFPTIIHRLYPMLNLIMSQKSASMLLDLTWMENILPKAMANSQMMAST--VISNQKGLVKLYFLS---FLITL--ILTMLLF----------SFHG---- +>Didelphis_virginiana_North_American_opossum +----MNENLFAPFITPT-ILGITTLPIIITFPCLILSSPK-RWLPNRIQILQMWLIRLITKQMMTMHNKQGRTWTLMLMSLILFIASTNLLGLLPYSFTPTTQLSMNIGMAIPLWAGTVIMGFRNKPKMSLAHFLPQGTPTPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALSS-ISMTVSTITFSILFLLTLLEIAVAMIQAYVFTLLVSLYLHDNSMPQLNTSTWTLTISLMI-ISLFCIYQLKMMNQTLIQITPSTEQSKL-TKH-TLP-W-EKKWTKIYLP-HS-SHQQF---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTIEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYMLNDMWAKIHFFIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNVVSSIGSFISLTAVILMVFIIWEAFASKREVLDVELTTTNIEWLYGCPPPYHTFEQPVFIKA----------MPYPMQLGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEIYNPYLTVKAMGHQWYWSYEFTDYENLMFDSYMIPTKDLSPGQLRLLEVDNRIVLPMELPIRMLISSEDVLHAWTMPSLGLKADAIPGRLNQITLTSSRPGVFYGQCSEICGSNHSFMPIVLEMASLKYFEKWSSMMQ----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHYNSSTLMFMGLTTMLLTMYQWWRDIIREGTFQGHHTPVVQKGLRYGMILFILSEVFFFIGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQMIQALLITISLGLYFTILQAMEYYEASFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCLLRQLFYHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINDSFIDLPTPSNISAWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNIHANGASMFFMCLFLHVGRGIYYGSYLYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGSTLVEWIWGGFSVDKATLTRFFAFHFILPFIILAMVVVHLLFLHETGSSNPTGLDPNSDKIPFHPYYTMKDILGLFLMIIILLSLAMFSPDLLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLLIIPMLHTSTQRSMAFRPISQTLFWMLTANLIILTWIGGQPVEQPYITIGQWASISYFTIIIILMPLAGMLENYMLK-PKFP-------MF--------LINLLMYIIPILLAVAFLTLVERKVLGYMQFRKGPNVIGPYGILQPFADALKLFIKEPLRPMTSSISMFTIAPTLALTLAFTIWTPLPMPNALLDLNLGLLFILALSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKNMLITQENMWLIMMTWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIMVMNAITATLFLGSPLSSNIPYINSMTFMMKMLILTTTFLWIRASYPRFRYDQLMYLLWKNFLPITLALCLWYISIPISLSSL-P-PQL--MSP-YVLTIMSFSLLLGTTMTLISNHWLTAWMGLEINTLAIIPLMTKPHHPR-SMESAIKYFMIQATASMIILFSAIFNASTTNQW--MTGQISNTSASFMMTIALAMKLGLAPFHFWVPEVTQGIPLLSGMLLLTWQKIAPISIFYQISPSLNMSLLMIL-SITSTLLGGWGGLNQTQLRKILAYSSIAHMGWMAIIIMIYPSLTILNLILYLASTITMFMVLNQSSSTKINSL---SILWNKSAPNMIIITLTLLSLGGLPPLTGFMPKWLILQELINFNNIPLAMMLALSTLLNLFFYMRIIYSSTLTMFPSINNTKMQW-TLYSHKTISPI-------PTLTIISSLLLPMTPVFITLS--MIN-LIITLITNSLLSTIIIIIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQLPSPFTTLILSYCLIMLLTVGLAYEWIQKG--LEWTE-MVLIKLNIIVAFMLALSGVLIYRSHLMSTLLCLEGMMLSLFIFMAAMITHFHMFSISMMPLILLVFSACEAGVGLALLVSISNTYGNDQVQNLNLLQCMLKILLPTLMLIPLTWLSKNKWLWINTTTYSLLISITSL-PMLYHPMDLGYNFN-NSFSLDSLSSPLLVLSCWLLPLMIMASQNHLNKESLMRKKLYLTMMVILQSSLIIAFTSSELMMFYILFETTLIPTLIIITRWGNQNERLNAGIYFLFYTLVGSLPLLVALLTMNKNLGTLHILMNSILINQLN-YTL-----SNSTLWYACMTAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRISLFTEP-MTMHLLYPFIILSMWGMIMTS--SICMRQTDLKSLIAYSSVSHMALVIIAALIQSTTSFMGATILMVAHGLTSSMLFCLANTNYERIHSRTMILARGLQLILPLMTTWWLTASLANLALPPTINLLGELMIITASFSWSNFSILLLGLNTVITALYSLYMLTTSQRGKFTHHMTSLYPSFTREHMLMTLHIMPLILLSLNPKYILGMTY---MKVINIS-NTMSIMSIILLILPLLYN---LLSLKKI-N-FPLYCKNM-IMLAFMMSLPSLLLFMYKGQESIITNWHWFSIHSFNISMSFKMDFFSIIFIPIALFVTWAILEFSLWYMHSDPNISQFFKYLIIFLLTMIILVSANNLFQLFIGWEGVGIMSFLLIGWWYGRSDANTAALQAILYNRIGDIGFMLTMAWLMLNCNSWDLQHIFSMNMH---PIALLGLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMLENNKTMLTITLCLGALTTLFTAMCAIMQNDIKKIVAFSTSSQLG--LMMVTVGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLFYTLPITSSALMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALTITLIATS-LTAIYSLRIIYYTLLGHPRFMTMSPLNENNPNLINPIIRLALGTIFAGFMLTTNMPPSYSITMTMPMFIKQMALMVTTTGLMMGMELNSLTNKL---MKSNNHTNNFLTMLGFYTQIMHRMQPLISLFMGQRIATMLIDMNWYEKAGPKGQANVHSKLSS-LISSSQKGLMKMYFLS---FLVSM--IFIILFT------------------ +>Presbytis_melalophos_mitred_leaf_monkey +----MNENLFTPFTTPT-FLGLPAVMPIIMFPMLLLPTSK-HLINNRLITIQQNLTQLILKQMMAIHNTKGQTWSLMLVSLIIFIATTNLLGLLPHSFTPTAQLSMNLAMAIPLWAGTVLTGLRFKTKSSLAHFLPQGTPTLLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLVGNATLALMT-MNFLATSLTLILLMLLMILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWLITIITML-PTLYLIMQLKLLSMNYHL-SPLQK-NPNMRMF-NNP-W-QLKWTKIYLP-HS-QPQHS---MLINRWLFSTNHKDIGTLYLLFGAWAGTMGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNLSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQVYAKAHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSTGSFISMVAMLLMIYMIWEAFASKRKVLLIEQPAYNLEWLHGSPPPYHTFEEPTFIKV-NKKG-----MAHPVQLGLQDATSPIMEELIAFHDHTFMIVSLISFLVLYVLSSVLTTKLISTNITDAQEMETIWTILPAIILVLIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPSLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAIPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHPYHMVKPSPWPLTGAFSALLMTSGLIMWFHFHSTTLLTLGLLTNMMTMYQWWRDIVRESTYQGHHTVPVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPHLGGHWPPTGIIPLNPLEVPLLNTSVLLASGVTITWAHHSLMENNRKQMIQALLITILLGIYFTLLQISEYYEAPFAISDGIYGSTFFIATGFHGLHVIIGSTFLTVCFIRQLLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTPTRKSNPIMKLINYSLIDLPTPSNISMWWNFGSLLATCLILQIITGLFLAMHYSPDTSSAFSSIAHITRDVNHGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGIMLLFMVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMNLVQWVWGGYSIDNPTLTRFFTLHFTLPFIITALTMLHLLFLHETGSNNPCGIPSDSDKIPFHPYYTIKDMLGMILLFLILMVLVLFSPDLLSDPDNYTPANPLNTPSHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAVIPLLHKSKQQSMSFRPLSQFLLWLLVTILLTLTWVGSQPVNQPFIMIGQVASTLYFTTTLILMPLASLIENNLL---K---------MF--------TINLLLIILPTMAAMAFLTLTERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPLTSTITLYIIAPALAFTIALLLWMPLPMPNPLINLNLGLLFILAMSSLTVHSILWSGWASNSNYALIGALRAVAQTISYEVTMAIILLSILLMSGSFNLHALITTQENLWLLLPSWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNALTATIFLGTLYPIHSPELFTTCFVIKTLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLAFLMWYTTMPITISGI-P-PQN--MNP-LAQLIIYSTMIMGTLITSLSSHWFLAWAGLEMNMLAFTSILIKKTNSR-STEAATKYFLVQSTASMILMMAIMYNNMYPGQW--AMVNNINQLSSLIMMMAFAMKLGMAPFHFWVPEVTQGTPLMPGLLLLTWQKLAPMSIMYQIYPSINTNILLTL-SILSIMVGSWGGLNQTQLRKILAYSSITHMGWMMTTLTYNPNITIFYLFTYIIITTTTFLALNLNSNTTALML---SRAWNKLTWLMPLMASTLLSMGGLPPLTGFLPKWITILELTKNNNFIMPTMMITMALLNLYFYLRLVYITSMTLLPTSNNTKMKW-QFESTKPMPLM-------APLIILTTLLLPVSTTALNIH---MN-LMLALTVNTLLTLLLTIIMFWLPQLNSYTEKANPYECGFDPLNSARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPVMIKSSIMLIIILTLGLAYEWTQKG--LEWTE-MPIIYMNIMLAFTISLLGMLTYRSHLMSSLLCLEGMMLSLFIMSTLMALNMHFPLANIVPIALLVFAACEAAVGLSLLISISNTYGLDHIHNLSLLQCMLKMVFPTIMLLPTTWFSKNNMIWINLTMHSLIISLIPL-LFFNQTNSNLISYS-TYLSSDPLTTPLLTLTAWLLPLMIMASQYHLHNESPLRKKLYLSMMIFLQISLITTFMATEMILFYILFETTLIPTLIIITRWGNQAERLNASTYFLLYTLAGSLPLLIMLMYLHNNLGSLNIVLLTLTAQKLT-ANW-----CHSLTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRFTSILSP-LTEYMAYPFLMLSLWGMIMTS--LTCLRQTDLKSLIAYSSVSHMALVIMASLIQTPWSFTGAIVLMIAHGLTSSMLFCLANSNYERTHSRIMALSRGLQTLLPLMASWWFMANLTNMALPPTINLIGELLVMMISFSWSHITIMLMGLNMLITALYSLYMFTTTQRGMLTSHIINMKPSFTRENMLMFMHISPIILLSINPNIIMGFTP--------MYASF-IMLILTSLTLPIIMT---LVKSNKN-HLYPNYVKTT-MMFAFIISLLPTTLYIFQDQDIIISNWHWTTIQTLELTLSFKLDYFSMLFTPIALFITWCIMEFSLWYMNSDPNINQFFKYLLIFLITMLILITANNLFQLFIGWEGVGIMSFLLISWWYSRTDANTAAIQAILYNRIGDIGFILAMAWFLLHYNSWDFQQMFVLDSN-SNFLPLVGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPMMENNMMIQSLTLCLGALTTMFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKMMPLTSTALIIGNLALTGMPFLTGFYSKDLIIETANTSYINAWALSITLIATS-LTSSYSTRTIILTLTGQPRFSTSTQINENNPALLNPMKRLTLGSLLAGFLITNNITPTTLPQLTMPYYLKTLALCVTTLGFLMALDLTLMTNNLK--MVIPSHMFKFSNMLGYFPTTIHRTVPYQNLMMSQNLAFLLLDSIWLEKSMPKMISYTHIITSV--TTTTQKGMIKLYFLS---FIIPL--ILIPFLVL----------------- +>Lepilemur_hubbardorum_Hubbards_sportive_lemur +----MNQNLFSSFITPT-IVGIPVVILIILAPSIFFPSPS-RLIDNRLTSLQQWLVQLMLKQLMATHNTKGRTWALMLISLILFISSTNLLGLLPHSFTPTHTTSMNLAMAIPLWAATIITGFRYKMKASLAHLLPQGTPTPLIPMLIIIETISLLIQPMALAVRLTANITAGHLLMHLIGGTTLALTS-INPNISLITFIILVLLTVLELAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFVTISSMI-LTLFIIFQLKVSKLNYPL-KLTSK-LLSSHNH-INP-W-ESKWTKIYSP-LL-LPQQS---MFINRWFYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVVNMKSPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNMISSIGSFISLTAVMLMVFMVWEAFASKREVLAVELTPTNLEWLHGCPPPYHTFEEPAYVKY-S--------MAHPVQLGFQDAASPIMEELLYFHDHTLMIVFLISSLVLYIISLMLSTKLTHTSTVDAQEVETVWTILPAVILILIALPSLRILYMMDEITTPSLTLKTMGHQWYWSYEYTDYENLFFDSYMIPLLDLKPGDLRLLEVDNRVALPTEMSIRMLVSSEDVLHSWAVPSLGVKTDAIPGRLNQITLMTSRPGIYYGQCSEICGANHSFMPIVLELVPLKYFEEWLLNML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSNYLLSLGLLTNLLTMYQWWRDVVREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGSCWPPTGIHPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGDRTYTLQALLTTILLGIYFTLLQTSEYFETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLTICFFRQMKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKNHPLMKIINSSFIDLPTPPNISSLWNFGSLLGACLTIQIITGLFLAMHYTADTTTAFSSVTHICRDVNYGWTIRYLHANGASMFFLCLFIHVGRGLYYGSFALLETWNIGIMLLFSVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVGKPTLTRFFALHFILPFIISALAMIHLLFLHETGSNNPLGTSSNSDKIPFHPYYTTKDFLGLLLLILLLMTLTLFCPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALILSILILVIIPFLQPNKQQTMMFRPLSQLLFWVLVADLLTLTWIGGQPVENPFINIGQMASILYFSLMVFIMPVTCLVENKML---KW--------MF--------AINLLLLIIPIIVAMAFFTLVERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYTKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMNGSFTLSTLITTQEYLWLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGTLYKPNMPETYTTNFITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYI-P-PQM--MNP-ITLLLIMITIFAGTLLTMVSSHWLLMWIGLEINMLAIIPILMKNYKPR-STEAATKYFLMQATASMLLMFTILLNATYSGQW--NITNTHNQFTPITITIALSMKLGVTPFHFWVPEVTQGISLLAGMLLLTWQKLAPISIMLQIHPWMNLNILLLI-ALLSILVGGWGGLNQTQLRKILAYSSIAHMGWMMAILMFCPSLTMLNLLIYLALTIVMFTTLNLNTSTTVLTL---SNLWNKTPMITLTTMIALLSLGGLPPLTGFLPKWMIIQELSKNSNIIMVMIMAIMALLNLYFYMRLIYNTFLTLFPTFNNMKMKW-QFQTTNQTRLM-------PPLIILSTLSLPLAPTFSTLY---MN-LPLTLAINTLMVMILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNLKLMLTTALALISILAAGLAYEWFQKG--LEWEE-MPSIFTNVALAFTMALMGMLVFRSHLMSSLLCLEGMMLSMFILSILFTMNLHFTLSFIMPILLLVLAACEAAIGLALLVMVSNTYGLDHVQNLNLLQCMLKIIIPTIMLLPMTWYSINPMVWINVTLHSLTISFTSL-SLLNQTDNNSNNFS-STFFSDPLSSPLLTLAMWLFPLTIMASQYHLAKEPSERKKHFLFTLISLQLFLILTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSFIQNYMGTLNLFMMTYWTQELA-NSW-----SSDLMWVACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITIILDP-LTKFMAYPFLMVCLWGMVMTS--LICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFSWSNMTIILTGLNMLITATYSLYMLTMTQRGEPLYHAHNFNPSLTRENALMSMHVFPLLLLTLNPKILMGPTY------MNLFSSF-TLITLTILMYPIMTN---LMNIHKN-TPYTLHVKLI-TTYAFLTSLIPATLFTFSQQETIVSNWHWMTIQTLKLTISLKMDYFSVLFIPVALLITWSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAIIYNRIGDIGFILSMAWFLMHSNTWELQQMFMLNHS-PNLVPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTVRTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMNMSNANAWALTITLIATS-LTAVYSIRIIFYVLMKQPRFTASPTINENNPLLINSIKRLAIGSIFAGFLLSSNILPMTTPQMTMPTYLKSMALVVTILGFILAMELSLTTNNLK--LKLPSQALKFSNMLGFFPNIIHRSTPLYKLITSQNTASLLLDLIWLEKSMPKNMSQLQLLFSK--TISNQKGLIKLYFLS---SLMST--LLALLLII----------------- +>Mephitis_mephitis_striped_skunk +----MNENLFASFTTPT-MIGLPIVIIIVLFPSILFPTSN-RLINNRLISIQQWLVQLTSKQMLSIHNNKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVVTGFRYKTKSSLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTATALITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITIVSMI-ITLFIVFQLKISKHSFPK-DPESK-YTKSPII-TTP-W-EKKWTKIYSP-LS-LPPQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMIWEAFASKREVLTISYTSTNIEWLHGCPPPYHTFEEPAYVLL-K--------MAYPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTNTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINSPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSMSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSVHLLLLGLTTNMLTMYQWWRDVIRESTFQGHHTPIVQKGLRYGMILFILSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIMPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGSRKHMLQALLITIFLGLYFTALQASEYYETSFTISDGIYGSTFFMATGFHGLHVIIGSTFLIICFLRQLNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINDSFIDLPTPANISTWWNFGSLLGICLILQITTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYLHVGRGLYYGSYMFLETWNIGILLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAVVHLLFLHETGSNNPSGMVSDTDKIPFHPYYTIKDILGVLLLILMLLTLVLFLPDMLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIIPLLNTSKQRSMMFRPLSQFLFWLLVADLLTLTWIGGQPVEHPYIIIGQLASMLYFTILLILMPVTSIIENNML---KW--------MF--------IINITSMIVPILLAVAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSLSMFILAPILALTLALTMWIPLPMPYPLINMNLSILFMLAMSSLAVYSILWSGWSSNSKYALIGALRAVAQTISYEVTLAIILLAILLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTVILFFGAFHNPYMPELYTVNFTAKTLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHMTLPIITASI-P-PQT--MKP-PIMIIILSTIIMGTMMVMISSHWLLIWIGFEMNMLAIIPILMKNSNPR-ATEASTKYFLTQATASMLLLLGIATNLLLTGHW--TMSNILNPIASNTITIALTMKLGLSPFHFWVPEVTQGVPMLPGMILLTWQKIAPLSILYQIAPSTNPNLLIIM-AITSVLVGGWGGLNQTQLRKILAYSSISHMGWMTAVLVYNPTMMMLNLLMYITMTLGTFMLFMYNSSTTTLSL---SHMWNKLPLATSLVLLLMLSIGGLPPLSGFMPKWMIIQELTKNDLIILPTFLAMTALLNLYFYTRLTYSTALTMFPSPNNMKMKW-LFENSKTMTLL-------SPLIILSTMLLPLTPMMSTLL---MN-IITTLLINITLPSLLMIIAFWLPQLNIYTEKANPYECGFDPTGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQSMNLDTVLTMSLMLILLLAASLAYEWAEKG--LEWTE-MSMVYINLFLAFIMSLMGLLVYRSHLMSSLLCLEGMMLSLFIMISITILNNHFTLASMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIILPTMMLIPLTWLSKPNMMWINSTLYSLLISLISL-IYLNQPGDNNLNSS-LLSFTDPLSAPLLTLTTWLLPLMLMASQFHLSKETTTRKKLYITMLALLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQAERLNAGSYFLFYTLAGSLPLLVALLYTQNNLNSLNFMMAQLLSEPMS-NSW-----SNVFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITIFLNP-LTNFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSFAGATALMIAHGLTSSMLFCLANSNYERAHSRTMILIRGLQTLLPLMAAWWLLASLANLALPPTINLIGELFVVMASFSWSNTTIMLMGTNIILTALYSLYMLIMTQRGKYTQHIKNIKPSFTRENTLMAMHLLPLMLLSLNPKIIMGTIY---MKVINLFASS-TMMTLLMLTLPVLLT---STDLYKN-KQYPEYVKMT-ISYAFMISMIPMMMFMYSGQEAIISNWHWMTIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIMTMAWFLLNLNTWDLQQIFMANHN-NLNMPLTGLLLAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTMQTITLCLGALTTLFTAMCALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFFHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKLMPFTATSLIIGSLALTGMPFLAGFYSKDLIIETANTSYTNAWALLMTLVATS-MTAAYSTRIMFFALLGQPRSYPTIMINENNPLLMNSIKRLLLGSIFAGFLITHNITPTSMPQMTMPYYLKMMALAVTIIGFILALELNLTAQNLK--LKHPSNLFKFSNMLGYFPIIIHRLIPMTNLTTSQKSAFMLMDTTWLENMLPKSISSFQMKSSI--LTSNQKGMIKLYFLS---FIITL--GMSAMVL----------SFHE---- +>Mazama_americana_red_brocket +----MNENLFASFITPM-ILGLPLATLIVIFPSLLFPTSN-RLMNNRLISLQQWLLQLMSKQMMGIHNTKGQTWTLMLMSLIIFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVTMGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISTAMALTTFIILVLLTVLEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFMMIMSMF-LTLFIIFQLKVSKHNFFY-NPEPT-STEMQKQ-NTP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGILLLILSLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEHPFITIGQLASILYFLIILVLMPVISTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSVSMFILAPILALGLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLMMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-IIFILILSTMMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIYPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMAILILVTLLSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTFMAITALLNLYFYMRLTYSTALTMFPSMNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSVLE---MN-LILALLTNFTLASLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWACQTDNLSTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNTHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTVMLMPLTWLSKGNMIWINSTTYSLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNITGSLNFLILQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTMFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNMTIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLMLSLNPKIILGPLY------MNLFSSF-SLITLLLLVIPIMTT---SLNTHKT-YNYPLHVKTT-IACAFITSMIPTMMFIYTGQEMIISNWHWLTIQTVKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLNPN-NSSMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-FTAIYSTRIIFFVLLGPPRFSTLMNINENNPFLTNSIKRLMVGSLFAGFIISNNIPPTTITQMTMPHYLKMMALTVTILGFILALEISNMTQNLK--FDYSSNAFKFSNMLGYFPTIMHRLTPYMNLTMSQKSASSLLDLIWLENILPKTTSLMQMKMSV--MVTNQKGLIKLYFLS---FLVTI--IISTILL----------NFHE---- +>Elaphurus_davidianus_Pere_Davids_deer +----MNENLFASFITPM-ILGLPLATLIVMFPSLLFPTSN-RLVNNRLISLQQWMLQLVSKQMMGIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISTTMALITFIVLVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LALFIIFQLKISKHNFHF-SPELM-LTKTQKQ-NTP-W-EMKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGMLLLVLFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIIIGQLASILYFLIILVLMPVTSTIENNLL---KW--------MF--------MINILMLIVPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFMSSI-P-PQT--MNP-IIFIIILSTMMMGTIIVMISSHWLLVWIGFEMNMLSIIPIMMKKHNPR-ATEAATKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTVLILITLLSMGGLPPLSGFMPKWMIIQEMTKNDSLILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPMLSILE---MN-LMLALLTNFTLASLLVVIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFTVALAGLLMYRSHLMSSLLCLEGMMLSLFVMASLTILNSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFSDNSLNFS-LVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFNTMELIFLYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNTTGSLNFLVLQYWVQPLP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-TLVTLLLLTIPIMTT---SSDNYKA-SNYPLYVKTT-ISCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLNPN-DSNVPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANMSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTIPQLTMPHYLKMMALTVTILGFILALEISNMTQNLK--FNYPTNIFKFSNMLGYFPTIMHRLAPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQTKMSI--MVTNQKGLIKLYFLS---FLVTI--TISMILF----------NFHE---- +>Neotragus_batesi_Bates_dwarf_antelope +----MNENLFASFITPM-ILGLPLVTLIVLFPSLLFPTSN-RLTNNRLISLQQWMLQIISKQMMSIHNSKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTMALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LTLFIIFQLKISKYNFYH-NPELT-LKKMSKH-NTP-W-EKKWTKTYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNMAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTATNLEWLNGCPPPYHTFEEPTYVSL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSITVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTTLLMLGLMTNTLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLVLQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFVTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGAIMLILVLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILILMPVLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPVAGSIENNLL---KW--------MF--------MINILMMIIPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSIFMFILAPIMALGLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQIWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPHMPELYTINFTIKSLLLTVSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMTSSI-P-PQT--MNP-AISIIIFMTIMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLLFSGQW--TVMKLFNPMASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLNLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILLYNPTMTLLNLILYIIMTSTMFMLFMANSTTTTLSL---SHTWNKTPIMTILTLITLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTLMAITALLNLYFYMRLTYSTTLTMFPSTNNMKMKW-QFHTTKQMIFL-------PTMTILSTMLLPLTPILSVLE---MN-LMLALLTNFTLALLLVTIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTTNLNTMLTMALFLITLLAMSLAYEWTQKG--LEWTE-MSIVFMNIMIAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLMILNTHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINPTMYSLLISLTSL-LLMNQFNDNSLNFS-PMFFSDSLSMPLLILTMWLLPLMLMASQQHLSKENLTRKKLFITMLILLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYIQNVTGSLNFLILQYWVQPMT-NSW-----SNVFTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLILNP-VTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMLITALYTLYMLITTQRGKHTHHINNITPSFTRENALMSLHIFPLLLLSLNPKIILGPLY------MNLFSSL-TLTTLILLTVPIIMT---NSKIYKT-PNYPLYVKTT-ILYAFTTSMIPTMMFINTGQEMIISNWHWLTIQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDLQQIFMLDSK-NSNLPLMGLTLAAMGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIILCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTSALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLLTLVATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPLLINSIKRLLVGSLFAGFLISNNIPPTTVPQMTMPYYLKLTALAITILGFILALEISNITYNLK--FNYPSNTFKFSNMLGYYPTIMHRLTPYINLTMSQKSASSILDLIWLENILPKTTSLIQMQAST--MVTNQKGLIKLYFLS---FLITI--LISMILF----------NFHE---- +>Lepus_americanus_snowshoe_hare +----MNENLFSSFTTPT-MMGLPIVILIIMFPTLLFPTPT-RLINNRLVSAQQWLAQLILKQMMMMHSPKGRTWSLMLISLIMFISSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGAALALTS-ISPTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLVTITAMI-LTLFILIQLKFHKYSYPL-SPAPK-MFKSTSF-PTP-W-EMKWTKIYSP-LL-PPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDQTWAKIHFTVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMVMIFMIWEAFASKREVETVELTTTNLEWLHGCPPPYHTFEEPAYVKA----------MAYPFQLGFQDASSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMVPTPDLNPGDLRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLISTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSLSMI----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSPSLLLIGLLTNTLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMQQALAITILLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCLLRQLHFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIINHSLIDLPAPSNISAWWNFGSLLGLCLMIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWLIRYLHANGASMFFICLYMHVGRGIYYGSYTYLETWNIGIALLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMIHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDVLGFLMLILLLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIIPFLHTSKQRSMMFRPISQILFWILVADLLTLTWIGGQPVEHPFITIGQVASILYFSIILILMPLASLIENKVL---KW--------MF--------LINTFLLILPVLLAMAFLTLVERKILGYMQLRKGPNIVGPYGLLQPFADAIKLFTKEPLRPLTSSSLLFIIAPTLALTLALSMWLPIPMPYPLINLNMGVLFILATSSLAVYSILWSGWASNSKYALFGALRAVAQTISYEVTLAIILLCVLLMNGSFTLSSLITTQEYMWILFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYINIIMMNALTTILFLGSFHSHTNPEMFTVNFAAKTLLLTMTFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHISMPVTLSSI-P-PHM--MNP-LIFSIILFTLFLGTMITMFSSHWLTMWIGLEMNMLAIIPILINKATPR-STEAATKYFLTQATASMILMMAITLNILDSGQW--TLINPQNHFTPTMIMLALVIKLGMAPFHFWVPEVTQGIPLKSGLILLTWQKLAPLSILYQISSSIDSTMMMLV-AILSIMVGGWGGLNQTQLRKILAYSSIAHMGWMAAIITFNPNTMILNLIIYILLTIPMFMMFIQHTTTTTLSL---SQMWNKTPFMVTTILITLMSLGGLPPLTGFIPKWIIIQELTKNGNIIIPTVMAMLALLNLYFYLRLIYSSSLTMFPTTNNLKMKW-QFESMKRMTFM-------APLIILSTMFLPLTPMLSILN---MN-LILVLLINMTISLILVTIAFWLPQLNIYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAAQFNNLSLVLIMALMLISILALGLAYEWIQKG--LEWVE-MPSIYINIYLAFIFALLGMLIYRSHLMSSLLCLEGMMLSLFILITLTALNTHYTLSFMFPIILLVFAACEAAIGLALLVMVSNTYGMDYVQNLNLLQCMLKTIIPTIMLIPTVWWSKNNMIWINATIYSLLISLTTF-LLLNQPNDTNLNYS-TTFFSDALSTPLLMLTVWLLPLMILASQHHLSKESLLRKKTYISLLVSLQIFLVMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLLVALIHLQNSMGSLNFLLMQLSNESLP-TSW-----SSSLMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITILLNP-VTEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTILPLMAAWWLLASLTNLALPPTINLLGELLVVMASFSWSSLTIILMGTNVLITALYSLYMLSTTQRGKFTYHTNNISPTFTRENTLMTLHLAPLLLLSINPKIILGPML------MNLFSTS-TAVSIIILVLPIMAS---FTNIFNH-SNYPYYVKTS-VSYAFIISLIPTLIFIISNQETMVSNWHWMTIHTLKLTTSFKLDYFSMLFTPIALFVTWSIMEFSMWYMHSDPKINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFIMAMAWFAINLNTWEFQQMFMADNN-ITILPLIGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLLENNKTAQTLILCLGAITTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKTLPFTSSALTIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALTITLIATS-LTAVYSTRIIFFALLGQPRYPTLIIINENNPLLINSIKRLALGSIFAGFLISNLISPNNIPQMTMPLYMKTTALFITILGFSIAMELNQLSLHLK--MSTQSNSFNFSSMLGFFPTTIHRLLPYVNLSVSQNVATLLLDMTWTEKAIPKNISDIQILAST--SVSSQKGLIKFYSLS---FLISM--LLALFILA----------------- +>Balaenoptera_brydei_Brydes_whale +----MNENLFAPFMIPT-MLGIPITTLIIILPSVLFPTPN-RLINNRTISIQQWLTKLTSKQLMNVHSPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNMGMAIPLWAGTVATGFRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGETTLVLMN-TSLFTALITFTILALLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLLTILSMF-LALFMLFQLKISKHSYSP-SPKLV-STKTQKQ-QTP-W-NTTWTKIYLP-LL---------MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWTKIHFMIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLAVDLTSTNLEWLNGCPPPYHTFEEPAFVNP-KWS------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEVNNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQMTLMSMRPGLFYGQCSEICGSNHSFMPIVLELVPLETFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLSTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIRPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIALGLYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNDVFVDLPTPSNISSWWNFGSLLGLCLITQILTGLFLAMHYTPDTTTAFSSVAHICRDVNYGWVIRYLHANGASMFFICLYAHMGRGLYYGSYAFRETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAMVHLIFLHETGSNNPTGIPSDMDKIPFHPYYTTKDILGALLLILTLLMLTLFVPDLLGDPDNYTPANPLSTPTHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILALIPMLHTSKQRSMMFRPFSQFLFWVLIADLLTLTWIGGQPVEHPYVIVGQFASILYFLLILVLMPVTSLIENKLM---KW--------MF--------MINILMLILPILLAVAFLTLVERKILGYMQFRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPMLALALALTMWSPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLATTQEQLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTAILFLGAFHNPHNPELYTTNLIIKTLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI-P-PQT--MNP-SIFIILLTTLILGTMLVITSSHWLLAWIGFEMNMMAFIPIMMKTPSPR-ATEASTKYLLTQATASALLMMAIIINLMYSGQW--TITKLFNPTASTLMTVALAIKLGLAPFHFWVPEVTQGIPLTTGLILLTWQKLAPLSILYQISPSINLYLMLIM-SLLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILPYSPTLMLLNLLIYITMTFTMFMLFIQNSTTTTLSL---AQTWNKTPIITTLTMLTLLSMGGLPPLSGFMPKWMIIQELTKNDLLIMPTFMAITALLNLYFYMRLTYSTALTLFPSTNNMKMKW-QFYPTKRATLL-------PTAIVISTMLLPLTPMLSILL---MN-LLLTLLTNTMLALLLVFIAFWLPQLNMYTEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQSNNLNTTLTMALFLISLLAASLAYEWTQEG--LEWAE-MTLIHMNVLMAFSMSLVGLLMYRSHLMSALLCLEGMMLSLFTLAALTILNSHFTLANMMPIILLVFAACEAAIGLALLVMVSNTYGTDYVQSLNLLQCMLKFIIPTIMLMPLTWLSKNNLIWINSTAHSLLISFSSL-LLLNQLNENSLNYS-LIFFSDPLSTPLLMLTMWLLPLMLMASQSHLIKEPPVRKKLYITMLITLQTLLIMTFTATELILFYIMFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALVYLQNTTGSLNFLLLQHWAEPLS-TSW-----SNIFMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITSMLNP-LTEHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQVFLPLMATWWLLASLTNLALPPTINLIGELLVVMSVFSWSNPTILLMGANIVITALYTLYMLIMTQRGKHTHHINNITPSFTREHTLMALHIIPLLLLSLNPKIILGPLY------MNLFTSF-TLLTLLILFTPIMTS---NTDPHKN-NKYQSYVKNT-VFCAFITSLIPAMMYLHTNQEALISNWHWVTIQTLKLTLSFKMDYFSLMFMPVALFITWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLLASMAWFLSNMNTWDLQQIFMLNQN-PLNFPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLMENNSLVQTVTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPFTTTALIIGCLALTGMPFLTGFYSKDPIIEAATSSYTNAWALLLTLTATS-LTAVYSTRIIFFALLGQPRFPPSMTINENNPLLINPIKRLLIGSIFAGFILSNSIPPTTTPLMTMPLHLKLTALVMTTLGFIIAFEINLYTQNLK--YTHPSNSSKFSTLLGYFPTTMHRLPPHLDLLMSQKLATSLLDLTWLETILPKTTALIQLKAST--LTSNQQGLIKLYFLS---FLITI--TLSMILF----------SYPE---- +>Macaca_sylvanus_Barbary_ape +----MNENLFTPFSTPM-ILNQPATIPIILFPTLLILTSK-HPINNRLATIQQNLTQFTLKQMMTTHNAKGQTWSLMLTSLITFITMTNLLGLTPHSFTPTTQLSMNLAMRIPLWAGTVIMGLRFKTKNSLAHLLPQGTPTLLIPLLVAIETISLLIQPVALAVRLTANITAGHLLMHLIGNATLALSS-INFPMTLLIFTLLALLTILEVAVALIQAYVFTLLTSLYLHNNTMPQLDTSTWSTTIMAML-PTLYLITQLKLLNTNYYQ-PPLTK-NPNLQTH-NIY-W-QPEWTKTCLP-HS-QPQ-----MLINRWLFSTNHKDIGTLYLLFGAWAGIMGTALSLLIRAELGQPGNLLGNDHIYNVVVTAHAFIMIFFTVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWHLPPSFLLLMASTVVEAGVGTGWTVYPPLAGNFSHPGASVDLIIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGVVSHIVAYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTCAKVHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSFISLTAMILMIYMIWEAFASKRKVLLIEQPLTNLEWLNGSPPPYHTFEEPTYIKL-N--------MAHPVQLSLQDATSPVMEELITFHDHAFMAMSLISFLVLYALLSTLTTKLTNTNITNAQEMETIWTILPAIILILIALPSLRILYLTDEINDPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEASVRMMITSQDVLHSWAIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MTHQTHAYHMVKPSPWPLTGALSAFSMTSGLVMWFHLHSTTLLMLGLLTNMLTSYQWWRDIVRESTYQGHHTAPVQKNLRYGMTLFIVSEVFFFIGFFWAFYHSSLAPTPCLGGHWPPTGIIPLNPLEVPLLNTSVLLASGVTITWAHHSLMNNNRKQTIQALLITILLGIYFTLLQISEYFEAPFTISDGIYGSTFFITTGFHGLHVIIGSMFLSTCLIRQLLYHFTSNHHFGFEAATWYWHFVDVVWLLLYISIYWWGS--MIPMRKSSPIMKMINHSLIDLPTPSNLSMWWNFGSLLTACLILQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWITRYLHANGASMLFICLFLHMGRGLYYGSYLLLETWNIGIMLLLATMTTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGANLVQWVWGGYTIDSPTLTRFFTLHFILPFIIVALTTVHLLFLHETGSNNPCGISSDSDKIAFHPYYTIKDILGLVLLLFALAMLTLFSPNLLSDPDNYTPADPLNTPPHIKPEWYFLFAYTILRSVPNKLGGVLALFLSILILAAIPMLHKSKQQSMMFRPLSQFLFWLLTAILLTLTWIGSEPVIQPFITIGQVASAMYFITILILMPLTSLIENNLL---KWT-------MT--------TMNLLLLIMSTLAAMAFLTLVERKLLGHMQLRKGPNIVGPHGLLQPFADAMKLFTKEPLKPSTSTTALYIFAPALAFFIALLLWTPLPMPNALINLNLGLLFILAMSSLIVYSILWSGWASNSNYALIGALRAVAQTISYEITLTIILLSVLLMNGSFNLNTLITTQEHLWLLLPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYAAGPFALFFMAEYMNIMMMNALTATIFLGTFYPIHSPELFTTCLTTKTLFLTSLFLWIRAAYPRFRYDQLMHLLWKNFLPLTLALLMWSTSMPIAISNI-P-PQT--MNP-LAQLIIYTTMIAGTLITTLSSHWFLAWAGLEMNMLAFIPILTKKTNLR-STEAATKYFLMQSTASMILLMAIISNNLSSGCW--TMTNYINQLPSLMMTIALTMKLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQIHPSINTHTLLTL-STLSIAVGSWGGLNQTQLRKILGYSSITHMGWMMMTLVYNPTTTILYLTMYIILTTTMFLILNLNSSTTTLML---SRTWNKSTHLAPLTAPILMSLGGLPPLTGFLPKWAIIQELTMNNNFLIPSIMTIMTLLNLYFYMRLIYTTSLTLFPTSNNTKMTW-QFENTKPTLLI-------PPLIIISTLLLPISPLILATH---MN-LALALMTNTLLTSLLTIIMFWLPQLNSYVEKTSPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWAIQTTNLQTMIKLTIALIIILTLSLAYEWTQKG--LDWAE-MTPTYMNIMLAFTISLLGMLTYRSHLMASLLCLEGMAMSLFIMTALIASNTHSPLINIMPIILLVFAACEAAVGLALLVSISNTYGLDYIHNLNLLQCMLKLIIPTTMLLPMTWLSKNNMIWINLTTYSLAISLIPL-VFFNQSNTNLLNDS-TYLSSDPLTTPLLTLTMWLLPLMIMASQHHLHNEPPSQKKLFLFMMILLQITLILTFMATELIMFYILFETTLIPTLIIITKWGSQAKRLNASTYFLFYTLTGSLPLLIMLSHTYNNTGSLNIMLLTLTNQKLT-ISW-----SHNFTWLACMMAFMTKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTPILNP-LTEYMAYPFLMLSLWGMIMTS--LTCLRQTDLKSLIAYSSVSHMALVIVASLIQTPWSFSGATILMVAHGLTSSMYFCLANSNYERTHSRIMLLSRGLQILLPLTAFWWFTASLTNLALPPTINLLGELFVIATSFSWSHITIMLTGLNMLITALYSLHMFTTTQRGALTHHMINMKPPFTRENMLMLMHLAPIILLSLNPNIILGFTS------MIMYTPI-MMTTLISLTLPIFAT---LINPNKK-HLYPNYVKTA-VMYAFITSLSSTTLYMFLNQETIIWSWHWMMTQTLSLTLSFKLDYFSMMFTPIALLTTWSIMEFSLWYMSSDPNIDQFFKYLLIFLITMLILVTANNLFQFFIGWEGMGIMSFLLISWWHARTDANTAAIQAILYNRIGDIGLILTMTWFLLHYNSWDFQQMLALNSN-SSSLPLMGLLLAARGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEANTLIQNLTLCLGAITTLFMAVCALTQNDIKKVVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHALFKATLFMCSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLIIGNLALTGMPFLTGFYSKDLIIEATNTSHTNAWALFTTLVATS-LTSAYSTRTILLTLTGQPRFPALTNINENNPALLNPIKRLTMGSMVAGFLITNNVPPTTLPQPMMPLYLKLSALCATTLGFLAALDLTLMTNKLK--MKNPSQTFKFSNMLGYFPTTIHRTIPYQNLLMSQNLALLLLDSAWLEKSMPKMISQAHTTASM--AVTTQKGMIKLYFLS---LLIPL--TLTLLLMM----------------- +>Rusa_timorensis_Javan_rusa +----MNENLFASFIAPM-ILGLPLATLIVMFPSLLFPTSN-RLVNNRLISLQQWMLQLVSKQMMGIHNAKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGAALALMS-ISTTMALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSAWLMMIMSMF-LALFIIFQLKISKHNFHF-NPELM-STKTQKQ-NIP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLNHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVVLLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGVPSDADKIPFHPYYTIKDILGILLMVLFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALISSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIIIGQLASILYFFIILVLMPITSTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPVLPELYTINFIMKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFMSSI-P-PQT--MNP-IIFILILSTMMMGTIIVMISSHWLLVWIGFEMNMLTIIPIMMKKHNPR-ATEAATKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMFMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTVLVLITLLSMGGLPPLSGFMPKWMIIQELTKNDSLILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSILE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFMVALAGLLMYRSHLMSSLLCLEGMMLSLFVLASLTILNSHFTLASMMPIILLVFAACEAALGLSLLVKVSNTYGTDYVQNLNLLQCMLKYIVPTMMLMPLTWLSKGNMIWINSTTHSLLISLTSL-LLMNQFSDNSLNFS-LMFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYLQNITGSLNFLVLQYWVQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSF-TLATLLLLTIPIMTT---GSDNYKT-SNYPLYVKTT-ISYAFITSMIPTMMFIHTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNAWDFQQIFMLSPN-DSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTIPQLTMPYYLKMMALTVTILGFILALEISNMTQNLK--FNYPTNIFKFSNMLGYFPTIMHRLAPYMNLTMSQKSASSLLDLIWLENILPKTTSLIQTKMSI--MVTNQKGLIKLYFLS---FLVTI--TVSMILF----------NFHE---- +>Ochotona_princeps_American_pika +----MNENLFSSFITPS-IMGLPIVILIIMFPIILFPTPT-RLINNRLIAIQQWLVQLILKQMMLIHNPKGRTWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLALTS-ISPATATITFIILLLLTGLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSML-VSLFSLIQLKFHKYTFPA-NPSPA-SLKSTKQ-ITP-W-ESKWTKIYSP-LS-LPPQL---MFINRWLFSTNHKDIGTLYMLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGVGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGVISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDPVWAKIHFAVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTSWNMVSSMGSFISLTAVMIMIFMIWEAFASKREVSTVELTTTNLEWLHGCPPPYHTFEEPAYVKA----------MAYPSQMGFQDASSPIMEELMHFHDHTLMIVFLISTLVLYIIALMLSTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMPVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKHFEAWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLVMWFHFHSSLLLSIGLLTNTLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPVGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMQQALLITILLGAYFTLLQASEYYETTFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCLLRQFNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNMRKNHPLMKIVNHSFIDLPTPSNISAWWNFGSLLGLCLGIQIITGLFLAMHYTSDTLTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGIYYGSYTYSETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFILPFIIAALVMVHLLFLHETGSNNPTGIISDADKIPFHPYYTVKDALGFLLLTTLLLTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSIAILAIMPLLHTSKQRSMMFRPISQTLFWILVADLLTLTWIGGQPVEHPFIIIGQLASFLYFLLILVLMPACSLIENKLL---KW--------MF--------LANIILLILPVLLAMAFLTLVERKILGYMQLRKGPNVVGPYGLLQPFADAVKLFVKEPLRPLTSSPFLFIIAPTLALTLALTMWIPIPMPYPLINMNMGILFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFALSSLIDTQEYMWILIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYTNIIMMNALTVTLFLGAFHDTHNPQLFTINFAIKTLLLTMVFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPVFLAGI-P-PYA--MNP-LVLTMIILTLASGTAIATFSSHWLLIWIGLEMNMLSIIPMLTYKSNPR-STEAATKYFLTQATASMILMMGIILNLMYSGHW--TILNSNNQIPPLLMMTALTMKLGMAPFHFWVPEVTQGVDLKSALLLLTWQKIAPLCILYQIHNSLNTTLLTLM-GLLSIMIGGWGGLNQTQLRKILAYSSIAHMGWMGIILTYNPDIMLLNLIVYIILTIPMFMMLIINSSTTALSL---AQTWNKTPLMTAAMLTILMSLGGLPPLTGFMPKWAIINELTKNDSIILPTLMAMLALLNLYFYMRLIYSTSLTMFPTTNNMKMKW-QFEFKNQAYFL-------SPLIILSTLSLPLLPLFTAWY---MN-LILALFINTLIPMILITIAFWLPQTYAYSEKASPYECGFDPMGSARLPFSLKFFLVAITFLLFDLEIALLLPLPWAAQTSNLSLMLTIALLLISVLAMGLAYEWMQKG--LEWVE-MSITTLNIMVAFMMALLGMFVYRSHLMSSLLCLEGMMLSLFMLATIVSLNMNFTISFMFPVILLVFAACEAAVGLALLIMVSNTYGMDYIHNLNLLQCMLKLIIPTIMLLPLTWWSNNKMLWINTTTHSLLISLVAL-LLMYQPNVHNLNFS-LMFSSDPLSTPLLILTFWLLPLMLIASQNHLSKENPPRKKLFISMLVLLQIFLVMTFSATELILFYILFEATLIPTLVIITRWGNQAERLNAGTYFLFYTLMGSLPLLVALLYIHNTSGTLNFLVIQILARPLT-DSW-----SNSLLWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNP-VTEYMAYPFLLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMAAWWLLASLTNLALPPSINLIGELFVIISSFSWSNLTIILAGINMLITALYTLYMLSTTQRGKLTYHINNMTPSFTREHTLILLHLLPLILLSINPKIILGITY------MNLFSTL-SALTMLILTLPIFMS---LTNFYLH-PTFPTYVKNS-VSLAFMISLVPTVMFLYTNQEMVLSNWHWTTIHTIKFSINLKLDFFSMLFIPVALFVTWSIMEFSLWYMHSDPNINRFFKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRIGDIGFVLSMAWFFIHMNSWELQQIFMLEQN-NLTLPLMGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRFYPILESNKLAQSLVLCLGALTTLFTALCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFNTLPFTSSALTIGSLALTGMPFLTGFYSKDLIIEAVNTSHTNAWALLLTLIATS-MTAIYSTRVIFFTLLNQPRFPPMVTINENNPYLTNSIKRLALGSIFAGFLISNNIPPFTVPPMTMPLYTKMAALMVTVLGFLLAMELNQLTLNLK--LNPHSKPFYFSNLLGFFPTTMHRLIPHASLLFSLNTATTTLDMTWTEKAIPKTIATIQMNLSS--LISTQKGLIKLYSLT---FLISI--TLAILILI----------------- +>Procolobus_verus_olive_colobus +----MNENLFTSFMAPT-ILGLPAAIPIILFPALLFPTSK-HLINNRLITIQQNLIQLILKQIMVIHNTKGQTWSLMLMSLITFIATTNLLGLLPHSFTPTAQLSMNLAMAIPLWAGTVITGFRFKTKSSLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGSAALALSA-INFPATSLILILLVLLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWFIIIVTML-PTLYIIIQLKLLDMNYYL-PPSQK-VSKAQLH-NNP-W-QLKWTKIYSP-LL---------MLINRWLFSTNHKDIGTLYLLFGAWAGIMGMAMSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNLSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQVCAKAHFVIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSMGSFISLVAMLLMVYMIWEAFASKRKVLLIEQPTSNLEWLHGSPPPYHTFDEPVFIKI-K--------MAHPVQLGLQDATSPIMEELIAFHDHAFMIVSLISFLVLYILSSVLMTKLTSTNITDAQEMETIWTILPAIILVLIALPSLRILYLTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTTFTAMRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL----------MAHQTHPYHMVKPSPWPLTGALSALLMTSGLIMWFHFYSTTLLTLGLATNLLTMYQWWRDVIRESTYQGHHTTPVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPHLGGHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMEGNRKQMTQALSTTILLGIYFTLLQASEYYEAPFTISDGIYGSTFFIATGFHGLHVIIGSTFLTVCLIRQLLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTPTRKSNPIMKMVNHALIDLPAPSNISTWWNFGSLLATCLLLQIITGLFLAMHYAPDTSSAFSSVAHITRDVNYGWTIRYLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGIMLLLMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGYSIDNPTLTRFFTFHFTLPFIIAAFTTLHLLFLHETGSNNPCGIPSNSDKIPFHPYYTIKDILGLAFLLLTLMMLVLFSPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLMSILILAIMPMLHKSKQQSMTFRPLSQLLLWFLVMTLLILTWIGSQPVNQPFITIGQVASITYFTTILILMPLASLVENNLL---K---------MF--------TMNLLLIILPIMAAMAFLTLTERKLLGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPSKPSTSTTSLYIIAPALAFFIALLLWVPLPMPNSLINLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIIMLSVLLMSGSFNLHTLITAQEHFWFLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIIMMNALTTTIFLGTLYPIYSPELFTTCFITKMLLLTSLFLWIRATYPRFRYDQLMHLLWKNFLPLTLAFLMWYISTPIMTSGI-P-PQN--MNP-LAQLIIYSTMITGTIITLMSSHWFLAWAGLEMNMLAFTPILIKKANPR-STEAATKYFLTQSTASMVFMLAIIYNSVVSGQW--TMMNKLDQLPSLITTVALATKLGMTPFHFWVPEVTQGTPLISGLLLLTWQKLAPLSIMYQIYPSINVNVLLTL-STLSIMMGSWGGLNQTQLRKIMAYSSITHMGWMMMTLVYNPNITVFYLCIYIIMTTTAFLALNLNSNTTTLML---ARTWNKLTWLMPLMSSTLLSMGGLPPLTGFMPKWVTIQELTKNNSYIIPTVMIIMTLLNLFFYMRLIYVTSMTLLPTTNNMKMKW-QFENTKPTLFI-------PPLIILTTLLLPMSPTTLAIF---MN-LVLILMVNTLLTLLLMIVMFWLPQLNTYTEKANPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPVMIKSSIMLITILTLSLAYEWTQKG--LDWTE-MPIIYMNIILAFIISLLGMLIYRSHLMSSLLCLEGMMLSLFIMSTIAALNTHSPLANIVPIALLVFAACEAAVGLALLVSISNTYGLDHVHNLNLLQCMLKMIFPTIMLLPMTWFSKNSMIWINLTMHSLIISFIPL-LFFNQTSNSLINYS-NYLSSDPLTTPLLMLTAWLLPLMTMASQYHLHNESPSXKKLYLSMMIFLQISLIMTFMATELILFYILFETTLIPTLIIITRWGSQAERLNAGTYFLFYTLAGSLPLLIMLVYIYNSLGSLNIILLTLMAQKLT-TTW-----AHNLTWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILDP-LTEYMAYPFLMLSLWGMIMTS--SICLRQTDLKALIAYSSVSHMALVIVASLIKTPWSFTGAIVLMIAHGLTSSMLFCLANSNYERTHSRIMMLSRGLQALLPLMAFWWFMANLTNLALPPTINLMGELLVVTTSFSWSHITIMLMGLNMLITALYSLHMFISTQRGMLTHHIISMKPSFTRENMLMFMHLSPIILLSLNPNIIMGLTP--------MHASI-IMLTLISLIFPIITA---FIKPNKK-YLYPNYVKTI-MAYAFTLSLLPTTLFIFLDQDMIISNWHWTTIQSLELTLSFKLDYFSMLFMPIALFITWCIMEFSLWYMSSDPNIDQFFKYLLTFLTTMLILITANNLFQLFIGWEGVGIMSFLLIGWWHARTDANTAALQAILYNRIGDIGFILAMAWFLLHYNSWDLQQMFMLGTS-PSLLPLMGLLLAATGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPMMENNMSIQSLTLCLGAITTLFMAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFICSGSIIHSLNNEQDIRKMGGLFKTMPLTSASLTIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALSITLIATS-LTSAYSTRTIILTLTGQPRFSTSININENNPALLNPLKRLAIGSMLAGFFITNNVSPTTLPQLTMPYYLKHLALCVTTLGFLMALDLALMTNNIK--MSTPSHMFKFSNMLGYFPTTMHRMIPYQNLILNQNIALLLLDSIWLEKSMPKTITHINTIASI--ATTTQKGMVKLYFLS---FLIPL--ALILLLMA----------------- +>Eulemur_rufus_Red-fronted_lemur +----MNENLFASFITPT-IVGIPIVIFIIMIPSILFPSPT-RLINNRLTSLQQWLIQLILKQLMLIHNIKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAAAVIKGFRHKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLSS-ISPTTASITFIILTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITIFSMI-LTLLIVFQLKISKFNYPL-SLTLK-DTNKYSH-TNP-W-ETKWTKIYLP-LS-LPQQ----MFINRWFYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDDTWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSIGSFISLTAVMLMVFMIWEAFASKREVLTVELTPTNLEWLHGCPPPYHTFEEPAYVKA----------MAYPVQLGFQDAASPIMEELLYFHDHTLMIMFLISSLVLYIISLMLTTELIHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEITTPSLTLKTMGHQWYWSYEYTDYENLCFDSYMTPPSDLKPGELRLLEVDNRVVLPTELPIRMLISSEDVLHSWTIPSLGVKTDAIPGRLNQATLMASRPGVYYGQCSEICGANHSFMPIVLELVPLKHFEEWLLSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNNTTLLTMGMLTNLLTMYQWWRDIVREGTFQGHHTSIVQKGLRYGMVLFIISEIFFFAGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGDRMHMLQALLITITLGIYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MNNIRKNHPLMKIMNNSFIDLPAPSNISSWWNFGSLLGACLALQIITGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFLCLFIHIGRGLYYGSFTLTETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVLVHLLFLHETGSNNPLGTSSDSDKIPFHPYYTIKDLLGLLLLILLTMMLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILAIIPILHTAKQRSMLFRPLSQCLFWTLTADLFILTWIGGQPVEYPFIAIGQAASILYFTLILILMPMVSLIENKML---KW--------MF--------MLNLLLLIVPILLAMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVMWIPLPLPYPLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSLLLMNGSFTLSTLITTQEYLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNLHTPETYTTSFATKTLLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVSLPVLTSCI-P-PQM--MKP-IVLMPIMLTIFMGTTLTMISSHWLLMWIGLEINMLAIIPILMEKANPR-STEAATKYFLTQATASMLLMFTIVTNAMYSGQW--GITNMCNQLISFSIILALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISIMLQIYPSINPNILLLI-TTLSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMMAILMYCPSMTTLNLLIYLMLTIAMFTMLNINTSTTTLAL---SNLWNKTPTMTITILISLLSLGGLPPLTGFLPKWIIAQELTKNNNIMLATTMTILALLNLYFYLRLIYSTSLTMFPTLNNLKMKW-QFQQTKQMFLL-------PPLIILTTLTLPLSPALLILN---MN-LPLALTTNIVLTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNPKLMLAVALILVSILAAGLAYEWLQKG--LEWVE-MPSISTNIILAFITALLGMLIFRSHLMSSLLCLEGMMLSMFILSTLTILNLHFTASFMMPILLLVFAACEAAVGLALLVTVSNTYGLDYIQNLNLLQCMLKIIIPTIMLFPVTWYSNKTMIWINTTSHSLLISLAGL-SFLNQFSDNSNNFS-LTFFSDPLSSPLVILTMWLLPLMIMASQYHLTKESWILKKLYLSMLISLQMFLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIYIQNYLGSLNMLTMKFYLQEMP-NSW-----SNSILWMACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTILDP-LTKHMAYPFLMLCLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVVVGILIQTPWSFMGATILMVAHGLTSSMLFCLANSNYERIHSRTMLLARGIQALLPLMATWWLLASLTNLALPPSINLIGELFVTMASFSWSNITIILVGLNMLITALYSLYMLTITQRGKLTYHTYNLNPSLTRENTLMSMHMLPLLLLTLNPKIILGLTY------MNLLTSF-TLVTLMILTLPVIMN---IMNAYKD-YSFTLHVKSS-IACAFTTSLIPTALFISSGQEAIIFHWHWMTIQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLMYSNTWEFQQMFMLNHN-PSMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMESNQSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANLSNVNAWALTITLIATS-MTAIYSTRIIFYALLGQPRFTTSTPINENNPLLINSIKRLTLGSIFAGFFLTNNILPMNIPQMTMPLHLKLTALTVTIMGFALAMELNLMTKNLN--LKLPSHLFNFSNSLGYYPTTTHRLIPSHNLNLSQNTASLLLDLIWLEKAMPKNLSHLQMLSST--IISNQTGLIKFYFLS---FLMSL--LLTLLLFM----------------- +>Aotus_azarai_azarai_Azaras_night_monkey +----MNQNLFTSFNIPM-MLGIPLVVLIILFPITLIMPSN-KLINNRLSSLQQWLIQLTLKQMMMVHTNKGRTWSLMLLALISFIALNNLLGLTPYAFTPTTQLSMNLGMAIPLWAATVFMGLRFKTKASLAHFLPQGTPVPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLLGDTALTLMS-IYVSSSTITIIIIILLITLELGVALIQAYVFTLLVSLYLHDNSMPQLDISPWPMVILSMI-AALFYFIQLKLLNFTFYN-TPLSK-PMKTQKH-KTT-W-ELKWTKIYLP-LS-MSQ-----MFMNRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRAELGQPGSLMEDDHVYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLNQTYAKIHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIISSVGSFISLTAVILMIFMIWEAFSSKRKVSTIEQLSTNLEWLYGCPPPYHTFEESTYVKTLVEKG-----MATPAQLGLQNASSPIMEELIAFHDHALMIIFLISSLVLYIISLMLTTKLTHTSTMNAQEIEMIWTILPAIILIMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYEDLAFDSYITPTYFLEPGEFRLLEVDNRTTLPMEADIRMLITSQDVLHSWAVPSLGVKTDAIPGRLNQAMLASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWASYLYIV--------MTHQTHAYHMVNPSPWPLTGALSAFLLTSGLVMWFHFYYTPLLATGLLASAMTMFQWWRDVVREGTYQGHHTPPVQKGLRYGMVLFIISEIFFFTGFFWAFYHSSLAPTPQTGGHWPPTGILPLNPMEVPLLNTAVLLASGVTITWAHHSLMEANRKESAQALFMTIALGAYFTYLQVSEYSETPFTISDGIYGSTFFMATGFHGLHVIIGTTFLATCYIRQQMYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTSPRKTHPLAKIINESFIDLPTPSNISSWWNFGSLLGICLIIQITTGLFLAMHYTPDTSTAFSSVAHITRDVNYGWMIRYMHANGASMFFVCLFLHIGRGLYYGSFLFLKTWNIGIILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFTFHFILPFIIAALATIHLLFLHETGSSNPSGMMSDPDKVAFHPYYTAKDILGLIFLLLSLMSLTLFMPDLLTDPDNYTLANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILMVIPMLHFSKQQSMMFRPITQILFWALVADLLTLTWIGGQPVEYPFVTIGQTASIMYFFIIITLMPLFALIENKLL---KW--------MF--------MINLLLLVIPALIAMAFLTLIERKILGYMQFRKGPNIVGPYGLLQPIADAMKLFTKEPLLPTTSATTLYVTAPTLALSIALLMWTPLPMPHPLINFNLGLLFMLATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFKLHSLIVTQEHSWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFLATSHNITMSELYTMNFVTKTVLLTSLFLWIRTAYPRFRYDQLMHLLWKKFLPLTLALCMWYISMPILMSGI-P-PQT--MNP-LAYLIISFTILMGTLITILSSHWFLIWMGLELNMLAIVPILAKNTSPR-STEASTKYFLMQATASMILLMAIFLNTLFSGQW--TISPSLNKILSTMMLIALVMKLGMAPLHFWLPEVTQGIPLIPAMLILTWQKLAPMSIILQIFPPMNLNILLVI-SILSIMIGSWGGLNQTQLRKILAYSSITHMGWMMAVLHYDPNITILTLIIYIFLTVSTFMMFYTNSNLTTLSL---SHSWNKLTWMMPMIPLMMMSLGGLPPLTGFSPKWAIMQELTKNENLIFPLTMAMLTLMNLYFYMRLMYSISMTMFPTSNNTKIDW-QLKYMKSTPLL-------SPLTVSSTLLLPVTPMMLMM----MN-LALTLATNILLALLLIIITFWLPQLNMYAEKHNPYECGFDPTTSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNLMLTINMIMALLVILALGLAYEWTQKG--LEWIE-MPFIYINVLLAYFMSLLGLLIYRSHLMSSLLCLEGMMLSLFIMATLTTLNMHLTLMYMMPIVLLVFAACEAAVGLALLVLISNLYGLDYVQNLNLLQCMLKIILPTIMMLPMMWLSKTHMMWINMMTSSLLISALTL-MSLYVPN-ISCNLS-LNFFSDPLTSPLLTLTAWLLPLMILATQQHLYNNPLPRKKLYMSMLILLQISLIMTFTATELILFYILFETTLIPTLIIITRWGYQPERLNAGSYFLFYTLAGSLPLLITLLYHLNNLGSLNMLTMMMYTKETL-LSW-----TNNVMWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITPILNP-LTEKMGYPFLILSLWGMIMTS--SICLRQADLKSLIAYSSVSHMALVILAILIQTPWSFTGAMILMIAHGLTSSLLFCLANSNYERIHSRTMMFTRGLQTLFPLLALWWLLANLANLALPPTINLMGELFTILASFSWSNFTIMFTGFNMLITALYSLHMFSSTQRGPLTYSTSNVKPLFTRENTLMIMHMAPILLLTMDPKTIMGLTP--------MHSSL-ILMTLIPLLAPIMIT---LINPHKN-SLYPHYVKLA-IIYALIISILSTTMFIFTGQESTISNWHWMTIQTIKLSMSFKLDFFSMMFTPVALFVTWSIVEFSMWYMSSDPNINQFLKYLLIFLVTMLILITANNLFQLFIGWEGMGIMSFLLISWWHGRTDANTAALQAILYNRIGDIGFILAMAWFFLYSNSWDFQQMFILDST-SNSFPLMSLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLIIRFHPLIENNLLTQTLILSLGAITTLFTAICAITQNDLKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLSAGSIIHSLNNEQDIRKMGGLFKTLPFTASSLVIGSLALMGTPFLTGFYSKDLIIETANTSYTNAWALTTTLVATS-LTAMYSIRIISHTMTEYPRFSTLITINENNPQLMNPINRLALGSIFAGFLISSCIPPTSQPQVTMPHYLKLMALSVTILGLFLAMELSFMTNNMK--LSTPVKTFYFSNMLGFYSITTHRLNPHSSLTASQNFTSTLLDLFWFEKAMPKLTMQTQISIST--TTSTQKGLIKLYFLS---FFIPP--TLALILTI----------------- +>Galemys_pyrenaicus_Pyrenean_desman +----MNENLFSSFTTPT-LMGLPIVMLIIMFPSMFFPSPN-RLINNRLISIQQWLIKLISKQMMSIHNMKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVMLGFRHKTKTSLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTAMITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTILGTI-MTLFILFQLKISKHMFYL-TPEAK-TMKSLKH-ENP-W-ETKWTKIYSP-LS-LPLL----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAEWGQPGSLLGDDQIYNVIVTAHAFVMIFFMVMPILLGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLMASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAISQYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAILAGFVHWFPLFSGYTLNQTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFIIWEAFASKREVATVELTSTNIEWLYGCPPPYHTFEEPTYVNS-KQ-------MAYPFQLGFQDATSPIMEELLHFHDHALMIAFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAMILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEELTFDSYMVPTTDLKPGGLRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVPLKCFEKWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSLVLLCMGLLGNLLTMYQWWRDIVRESTFQGHHTPVVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTHELGGYWPPAGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKPMIQALFITIALGIYFTVLQAMEYYEAPFTIADGVYGSTFFMATGFHGLHVVIGTSFLTVCFIRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNMRKTHPLMKIINNSFIDLPAPSNISSWWNFGSLLGICLVLQIITGMFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFMHVGRGLYYGSYMFTETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAGVHLLFLHETGSNNPSGLSSDTDKIPFHPYYTIKDILGALILILIISLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLALLPLLHTSKQRSMMFRPLSQCLFWLLAADLLTLTWIGGQPVEHPFIIIGQVASVLYFFLILIIMPLASIMENNML---KW--------MF--------MINLLLLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAVKLFTKEPLRPSTSSISMFIMAPILALTLALTMWIPLPMPHPLINMNLGVLFMLAVSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLFSGSFSLLSLIITQEYTWLLISSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNVLSTTLFLGTFHSPYMPELFSANFMVKTMALTISFLWVRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHISLPISFSGI-P-PQS--MNP-FAFLIIMFTLGLGTMIVLTSSHWLLIWAGFEMNMLSIIPLLMKKPNPR-SIEATTKYFLTQATASMLLMLAIIINLMYSGQW--TVMKSESHLATFMTTTAMIMKLGMAPFHFWVPEVTQGISLTSGMVLLTWQKIAPISILIQMSNSINTNLMVTT-GMISIMVGGWGGLNQTQLRKIMAYSSIAHMGWMATILTYNANMTMLNLLIYIILTTTMFSLLNFNSSTTTLSL---STLWNKMPLMAALIMLTLMSLGGLPPLSGFTPKWMIINELTKNNSIIMPTIMAISTLLNLYFYMRISYSTSLTMFPSSNNMKMMW-RFESTKKLPLL-------PPLLVFSTMLLPISPLLMLLN---MN-LLLAIITNTLLSSVLVLIAFWLPQLNTYAEKSSPYECGFDPMGSARIPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNSVITVLTTATMLLLLLALGLAYEWTQKG--LEWAE-MSLVYVNIMIAFSVSFLGLLMFRSHLMSSLLCLEGMMLSLFILGTILILNFHFTLASMAPIIMLVFAACEAAVGLSLLVMVSNTYGVDYVQNLNLLQCMLKIILSTVTLLPLVWLSKSNMIWINTTMYSLLISLSSF-SCLNQLSDNNMSFS-LTFFSDSLSTPLLMLTTWLLPLMLMASQHHLSNESLNRKKLYISMLGVLQVFLIMTFSATELVLFYILFETTLVPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALTYLQNYEGSLNFLTLQLTHTTLP-NNW-----SSSMLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRISVILSP-HMNYMAYPFLILSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVMIQTPWSYMGATALMVSHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELLVMLSSFSWSNMTMIMMGVNMTITALYTLYMLIQTQRGKHTHHIMNLNPSFTREHALMTLHMIPLLLLSLNPKIILGTMY------MNLLTTS-ILLSLIILMLPILFT---LSNNYKK-NSFPHYVKTT-ISYAFTVSMIPAMLFVMSGQEAMISSWHWVTINSMKLSISLKLDYFSITFVPVALFGTWSIMEFSMWYMHSDPDINRFFKYLLTFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILSMAWFLFNSNSWELQQMFITNTE-QNTLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMESNTTIQTLILCLGATTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLFKLMPFTTTALITGSLALTGMPFLTGFYSKDLIIEAVNTSYTNAWALLTTLIATS-LTAVYSTRIIFFVLLGQPRFPSMILINENNTLLMNPIKRLLLGSIFAGFLISNNLIPMSTQHMTMPPYIKMTALAVTILGFTLALELNMMTCYLK--LPHPTKMYNFSNQLGYFTIIMHRLIPKMTLNTSQKAASMLMDLTWMENILPKPISYSQMKASV--IVSNQKGLVKLYFLS---FLITI--TLSVLIF----------NFHA---- +>Saimiri_boliviensis_boliviensis_ +----MTQNLFTIFNIPV-VLGMPLAVLIIMFPSMLILPPN-NTINNRFSSIQQWLVQLTLKQMMITHSTTGRTWSLMLLTLITFISLNNLLGLTPYAFTPTTQLSMNIGMAIPLWMATVLMGLRLKTKTSLAHFLPQGTPTLLIPMLIIIETISLFIQPVALAVRLTANITAGHLLMHLLGTASLTLLS-IYLSSSLATIIVIILLITLELGVALIQAYVFTLLVSLYLHNNSMPQLDTSPWPMVILSMI-VTLFYITQLKMLNFISYT-NPLFK-SIKTKEH-KTT-W-KSKWPKTYSP-SL-MSQ-----MFMSRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRAELGQPGSLMEDDHIFNVIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGPSVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVFITAVLLLLSLPVLAAGITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSAAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIISSVGSFISLVAVILMIFMIWEAFSSKRKVLVIEQTSTNLEWLYGCPPPYHTFEESTYVKL----------MATPAQLGLQNATSPIMEELIAFHDHALMIIFLISSLVLYIMSLMLTTKLTHTSTMNAQEIEMIWTILPAIILIMIALPSLRILYMTDEFIKPYLTLKAIGHQWYWSYEYSDYEDLAFDSYIMPTYFLEPGEFRLLEVDNRTTLPMEADIRMLVSSHDVLHSWAVPSLGVKTDAIPGRLNQITLASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWAS-------------MTHQTHPYHMVNPSPWPLTGALSAFLLTSGLIMWFHFYLTLLLTAGLLASMATMFQWWRDVVRESTYQGHHTPPVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPQTGGHWPPTGILPLDPMEVPLLNTAVLLASGVTITWTHHSLMEANQKESTQALAMTIALGIYFTLLQMSEYSETPFTISDGIYGSTFFMATGFHGLHVIIGTTFLTMCYIRQQLHHFTPNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTSPRKTHPLKKMINNSFIDLPTPSNISFWWNLGSLLGACLIIQITTGLFLAMHYTPDTQTAFSSVAHITRDVNHGWTIRYMHANGASMFFTCLFLHIGRGLYYGSFLSRETWNIGTILLLTTMATAFMGYVLPWGQMSLWGATVITNLLSAIPYIGSNLVEWVWGGFSVDKATLTRFFTFHFVLPFIIAALATIHLLFLHETGSNNPSGMTSNPDKITFHPYYTIKDILGLILLLLLLMSLTLFMPDLLTDPDNYTLANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLMIIPTTHLSNQQSMTFRPITQIMFWMLTANLLTLTWIGGQPVEYPFIIIGQIASIMYFLIITTLIPLSALIENKLL---KW--------MF--------MINLLLLIIPALIAMAFLTLTERKILGYMQLRKGPNTIGPYGMLQPIADAMKLFTKEPLLPTTSTTTLYVIAPILALSVALILWTPLPMPHPLVNFNLGLLFVLATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNIHSLITTQEHSWLLLPAWPLTTMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFMATPHNTALPESYTTNFMIKTLLLTALFLWIRTAYPRLRYDQLMHLLWKKFLPLTLALCMWYISLPTLTSSI-P-PQT--MNP-IAHLFISLTILMGTMIAMFSSHWFLIWMGLELNMLAIVPTLAKSTNPR-STEASTKYFLVQATASMIFLMTTLLNYLSSGQW--TINPFLHQTLSTTMLIALMMKLGMAPLHFWLPEVTQGIPLAPTMLILTWQKLAPMSIITQIYPSMNLNILLTI-SILSIMVGSWGGLNQTQLRKILAYSSITHMGWMMAVLFHDPNITMLNLLIYILLTIPMLLIFNLNSNMTALSL---SHTWNKFTWMMPMFPMMMMSLGGLPPLTGFSPKWAIMQELTKNSNPTLPLTIAMLTLMNLYFYMRLTYSISMTMFPTSNNTKINW-QLKHMKLTPLM-------APLMVSSMFLLPTMPLMLLM----MY-LTLSLLTSISLTLLLIIITFWIPQFNLYLEKYNPYECGFDPTTSAHLPFSMKFFLVAITFLLFDLEIALLLPLPWTMQTNNLMLTINVILILLIILALGLAYEWTQEG--LDWTQ-MPFMYINVTLAYLMSLLGLSIYRSHLMSSLLCLEGMMLSLFIMTTLMTLNLHLVLMYMMPIALLVFAACEAAVGLALLVLISNLYGLDYVQNLNLLQCMLKIILPTTMLFPMMWLSKDHMLWINMMLWSLLISTLTL-MLLYMPN-NPYNLS-LISFSDPLTAPLLVLTTWLLPLMTLATQHHLYHNSPSRKKVYISMLILLQISLIMTFTATELILFYILFETTLVPTLIIISRWGYQPERLHASSYFLFYTLMGSLPLLITLLFYLDNLGSLNMLTMMIKTKELL-PSW-----TNNIMWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRIIPILNS-LTEKMNYPFLILSLWGMTMTS--LICLRQADLKSLIAYSSVSHMALVILAILIQTPWSFTGAMILMIAHGFTSSMLFCLANSNYERIHSRTMTFTRGLQTLFPLMGLWWLLANLANLALPPAINLVGELLTIVSSFSWSNFTIMFTGLNMLITALYSLHMYASTQRGPLTYSTSNMKPMFTRENTLMFMHMTPILLLTLSPKVIMGPSP-------MMHFSI-TLMTLISLLAPILAT---LINPNKS-TLYPYYVKLA-IIYALITSTLSMMFFILTGQESMISNWHWMTIQTIKLSLSFKMDFFSIMFTPVALFVTWSIVEFSMWYMSSDPNMNQFLKYLLIFLITMLILISSNNLFQLFIGWEGMGIMSFLLISWWYGRTDANTAALQAILYNRIGDIGLILAMTWSILYSNSWDFQQMFILNST-PNTFPLMSLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLIIRFYPMTENNPLIQTLTLSLGAITTLFTAICALTQNDMKKIVAFSTSSQLG--LMMVTVGINQPHLAFLHICTHAFFKAMMFLCAGSIIHSLNNEQDIRKMGGLLKTLPLTTSSLTIGSLALMGTPFLAGFYSKDLIIEAANTSYTNAWALTTTLVATS-LTAMYSIRIMFYTLTGYPRFTTLISINENNPLLKNPINRLAVGSIFAGFLISNCVLPASCPQITMPYYIKLTALGTTTLGLLLAMELSLMTNNVK--LSTPMKTYYFSNMLGFYSTTTHRLKPHSSLATSQNFASALLDLLWLEKSMPKMTAQTQSSIST--ATSTQKGLIKLYFLS---FLITP--TLALLLTI----------------- +>Mesoplodon_densirostris_Blainvilles_beaked_whale +----MNENLFASFTIPM-MLGLPIITLIIMFPTILFPTSN-RLINNRTISLQQWLTKLTSKQLMNTHSPKGQTWSLMLISLLLFIASTNLLGMLPHSFTPTTQLSMNIGMAIPLWAGAVITGFRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGKTTLVLMS-INLSVALITFMILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLLVILSML-LTLFMLFQLKISKHFYHL-NPK-T-TIKSQNQ-QTP-W-NNKWTKIYLP-LS-QSQ-----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTGLSLLIRAELGQPGTLIGDDQVYNVLVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGSPDMAFPRMNNMSFWLLPPSFLLLMASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGASSILGAINFITTIINMKPPAMTQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNSTWAKIHFVIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTSTNLEWLNGCPPPYHTFEEPAFVNP-KWS------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGDLRLLEVDNRMVLPMEMTIRVLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLENFEKWSTSML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSILLLALGLLTIILTVSQWWRDVIRESTFQGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIYPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIMLGIYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQMKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIINNAFIDLPTPANISSWWNFGSLLGLCLIMQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYAHIGRGLYYGSYIFQETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIILALTMVHLLFLHETGSNNPTGIPSDMDKIPFHPYYTIKDILGALLLILALLMLTLFAPDLLGDPDNYTPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILLFVPLLHTSKQRSMMFRPFSQFLFWLLIADFLTLTWIGGQPVEHPYMIMGQLASILYFLLILVLMPMASLIENKLL---KW--------MF--------MINILMLMLPILLAVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPILALTLALTMWCPLPMPHPLLNMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEQLWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNMFTTILFLGTFHDPYMPELYTTNLILKTLLLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMTASI-P-PQT--MNP-LISIIILTTLILSTTIVMTSSHWLFAWIGFEMNTMAIIPIMMKIPNPR-ATEASTKYFLTQATASMLLMMAIIINSMYSGQW--TIMNLFNPTASTLMTMALAIKLGLSPFHFWVPEVTQGVPLITGLILLTWQKLAPLSILYQISSSINLNLMLTM-SMLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILLYNPTLTLLNLLMYIMMTFTMFMLLIQNSTTTTLSL---SQMWNKMPITTTLTMLTLLSMGGLPPLSGFMPKWMIIQELTKNDTLILPTLMAMTALLNLYFYMRLTYSTALTLFPSMNNMKMKW-QFHSTKRMILL-------PTAIVMSTMLLPLTPMISILL---MN-LLLTLSTNMALALLLVIIAFWLPQLNTYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLNTMLTMALFLISLLAASLAYEWTQKG--LEWAE-MSLVHMNIIMAFTLSFMGLLMYRSHLMSALLCMEGMMLSLFILMALVVLNSHFTLASMMPIILLVFAACEAAIGLALLVMISNTYGTDYVQNLNLLQCMLKFIIPTIMLMPLTWLSKNSYIWINSTAHSLLISFTSL-LLLNQFNDNSLNYS-LTFFSDSLSTPLLMLTMWLLPLMLMASQYHLLKEPLIRKKLYITMLIMLQAFLIMTFTATELILFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALTYLQNTMGTLNFLLLQHWVQPLP-PSW-----SNTLMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITPLLNP-LTEHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQIFLPLMATWWLLASLTNLALPPTINLIGELLVVMSTFSWSNLTIILMGMNIVITALYSLYMLIMTQRGKHTHHINNLTPSFTREHALMALHIMPLLLLSLNPKIIMGFLY------MNMFTSF-ILLTLLILMAPILMS---TTNLYKN-NKYQYYVKNI-TLCAFTTSLIPAMMYLHTNQEMLISNWHWVTIQTLKLTLSFKMDYFSLMFIPVALFITWSIMEFSMWYMHSDPYINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWFGRADANTAALQAILYNRIGDIGFLLSMAWFLSNTNTWDLQQIFMLNQS-PPNLPLMGLVLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKFAQTMALSLGALTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLYKILPFTTTALIVGCLALTGMPFLAGFYSKDPIIEAATSSYTNAWALLLTLTATS-LTAIYSTRIIFFTLLGQPRFPPLTNINENNPLLINPIKRLLVGSIFTGFILTNNIPPMTTPLMTMPLHLKMTALTVTTLGFILAFEINLNTQYLK--HTHTSNFSKFLTLLGYFPTTMHRLPPYLNLSMSQKLSTSLLDLAWLEIILPKTASFIQMKAST--LTSNQQGLIKLYFLS---FLITI--ILSLILF----------NCPE---- +>Microtus_fortis_fortis_reed_vole +----MNENLFSSFITPT-MMGLPIVVLIIMLPSALLTSSK-RLIPNRFHSFQLWLIKLITKQMMLIHSPKGRTWSLMLASLIMFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPLWAGAVILGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLTS-ISPPAATITFIILALLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITVLSAT-ITLFILMQLKISLYIFPQ-TPSIK-LMKHTKT-NNP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLDDMWAKTHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLIMIFMIWEAFSSKREVLYVEHTSTNLEWLHGCPPPYHTFEEPTFVKV-K--------MAYPSQLGLQDASSPIMEELMNFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYENLCFDSYMVPTSDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGIKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEVVPLKNFEDWSLSMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSTTLLSLGLLGNSLTMYQWWRDVIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGISPLNPLEVPLLNTSVLLASGVTITWAHHSLMENKRNSMNQALFATIMLGAYFTILQASEYLETPFSISDGIYGSTFFMATGFHGLHVIIGSSFLIICLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTVIRKTHPLIKMINHSFIDLPAPSNISSWWNFGSLLGLCLIIQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGIYYGSYNMTETWNMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVLVHLLFLHETGSNNPTGLNSDTDKIPFHPYYTIKDFLGILILLMVFMILALFFPDILGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPILHTSKQRALTFRPITQTMYWILVADLLILTWIGGQPVEYPFIIIGQTASIAYFTIIMILMPIAGMIENNIL---DLD-------MY--------FTNILMLLVPVLIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFIKEPLRPLATSTTLFILAPALSLSLALSLWIPLPMPHPLVNLNLGILFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSFSIQSLIYTQEPLWLLIPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIILMNALSTIVFMNPFHDLNNPELFTTNFMIKTLMLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISIPIFMASI-P-PYT--MNP-TTLTIIYFTIMTGPIITMLSSNLFLMWIGLEMNLLALIPLMNNSPNPR-STEAATKYFLTQATASMILLFSILMNFKQLGLW--TFQPETNSTIMAATFISLAIKLGLAPFHSWLPEVTQGIKLNVGLVLLTWQKIAPLSILFQFYTLINPTLLILS-AVTSVLIGAWNGLNQTQTRKILAYSSIAHMGWMVSILPYNPSLTILNLLIYIAMTIPMFFVFHMHSFTSITSM---SLMWNKMPMALPMISLILLSTGGLPPLTGFLPKWIIITELMKNNNLSLATLMAMTALINLFFYTRLIFSTSLTTFPSNNNSKMYT-HQNYKKNNNIL-------PPMMIASTLMLPLSPLLL------MN-LMLILLTNITLTIALISVAFWLPHLNMYTEKANPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQFPNTNMLLTMASILITILALGLAYEWTQKG--LEWTE-MSPAVFNITLAFTFSFLGALMFRSHLMSTLLCLEGMMLSLFILATITPLSTHSMVMFPIPITILVFAACEAAVGLALLAMISNIYGSDFVQNLNLLQCMLKIILPSLMLMPLTWLSDNKKVWVNVTTYSLMINLISI-SLLWQNNETYPSFS-TLFSADLLSAPLLVLTTWLLPLTLLASQNHIKKEPEYSKKLYISLLISLQILLVMSFSANELIMFYILFEATLVPTLIVITRWGNQTERLNAGIYFLFYTLVGSIPLLIALIFIQTSTGTLNFILMTLSSSPID-QTW-----SNNILWLACIMAFMVKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRVSTLLDP-VTKYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVITAIMIQTPWSFMGAMTLMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMVFPLMATWWIMASLANLALPPTINLVGELVITISTFSWSSPSIILLGTNILITSIYSIYMIITTQRGKLTNHMNNLQPSHTRESTLMTLHILPLVLLTANPKLIMGPAP------MNAITTS-ILLIFTFLLLPLVIS---LTNMTKH-MNFPNYVTSC-IKCAFFISLIPLSSFFNSGTEFIVTDWQWLSIGPVKLWLSLKFDFFSTIFMPVALYVSWSIMEYSVWYMHSDPNLNRFIKYLLMFLITMIILTTANNLLQLFIGWEGVGIMSFLLISWWHGRADANTAALQAILYNRVGDIGFILAMTWYCLKTSSMEFQQIFLM-DN-SNTLPLAGLLLAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTSNNSTILTAMLCLGAMTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGLNQPHLAFLHICTHAFFKAMLFLCAGSIIHSLNDEQDIRKMGGVAKSMPLTSSCLTIGSLALTGMPFLTGFYSKDLIIEAANTCHTNAWALLMTLMATS-MTAVYSTRIIYFVLMTKPRFPPTITINENNPLMVNPIKRLALGSILAGFFISYNIPPTTVQVMTMPWYLKMMALAVTIMGFMIALDLNITTNNLK--PSESTLKNYFSTHLGYFPTIMHRLLPLKSLNTSFKTALTMLDLVWLEKAIPKVTSTIHTLTSS--AMSTQKGMLKLYFLS---FLITL--ICIPVVLLI---------------- +>Hippocamelus_antisensis_Peruvian_guemal +----MNENLFASFITPM-ILGLPLATFIVIFPSLLFPTSN-RLVNNRLISLQQWVLQLTSKQMMGTHNTKGQTWTLMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKTSLAHFLPQGTPTPLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLTLMN-ISTTMALITFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWFMMIVSMF-LTLFIIFQLKVSKHSFLF-NPEPM-LTKTQKQ-NIP-W-ETKWTKIYLP-LL-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREISTVELTTTNLEWLNGCPPPYHTFEEPTYINL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMNAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAVPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLNYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTIGLTTNFLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRSPMLQALFITIFLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLVLQILTGLFLAMHYSSDTTTAFTSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGALLLILFLMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALALSILILIFMPLLHMSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPVISTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLMMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHSPILPELYTINFTIKSLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-VIFTLILSTMMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHSPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPMASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFPSINLNMILFI-STLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMTLLNLIIYIIMTSTMFMLFMINSTTTTLSL---SHTWNKMPVMTVLILATLLSMGGLPPLSGFMPKWMIIQEMTKNNNLILPTFMAITALLNLYFYVRLTYSTALTMFPSVNNMKMKW-QFSTTKKMTLL-------PTMIVLSTMLLPLTPILSVLE---MN-LMLALLTNLTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWACQTNNLNTMLTMALFLISLLAASLAYEWTQKG--LEWIE-MSLVYMNIMTAFMVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNLHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWMSKGNMIWINSTTYSLLISLTSL-LLMNQFNDNSLNFS-LMFFSDSLSVPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIYLQNITGSLNFLILQYWMQPLS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMLLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQIFLPLMATWWLLASLTNLALPPTINLIGELFIVVSTFSWSNITMILMGLNMVITASYSLYMLTMTQRGKYTYHINNISPSFTRENALMSLHMLPLLLLSLNPKIILGPSY------MNLFSTF-TLTTLLLLTIPILTT---SSNNYKT-YNYPLHVKTT-ILYAFITSTIPTMMFMHTGQEMIISNWHWLTIQTIKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPN-NSNMPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSTLLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIETINTSYTNAWALLMTLIATS-FTAIYSTRIIFFTLLGQPRFPTLVTINENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTIPQMTMPPYLKMMALAVTALGFILALEISNMTQNLK--FNYSSNAFKFSNMLGYFPTIMHRLTPYMNLTMSQKSASSLLDLIWLENVLPKTISLMQMKMST--MVTDQKGLIKLYFLS---FLITI--IISTTLL----------SFHE---- +>Prionodon_pardicolor_ +----MNENLFASFTTPT-MMGLPIVILIVMFPSILFPSPN-RLVNNRLISLQQWLLQLTSKQMLTIHNNKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVVTGFRYKMKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTSVAFITFIILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIVSMI-MTLFIVFQLKVSKHLYPW-NPETK-SATMLKQ-PNP-W-EKKWTKIYSP-LS-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMIWEAFASKREVMMVELTSTNLEWLHGCPPPYHTFEEPTYVSS-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLAHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLVMWFHYTSMLLLALGMTTNLLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVLFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGIYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFMRQLKYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINGSFIDLPTPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWMIRYMHANGASMFFICLFMHVGRGMYYGSYTFLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAAVHLLFLHETGSNNPSGITSDLDKIPFHPYYTIKDILGLLFLIQVLMLLVLFSPDMLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIIPLLHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEYPFIIIGQLASVIYFSIILILMPISGIIENHLL---KW--------MF--------MLNILSLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSTSMFIIAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLATLITTQEHTWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHSPYMPELYTINFTIKTLFLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMTASI-P-PQT--MKP-PILIIIMSTVISGTMIVMTSSHWLTIWIGFEMNMLAIIPILMKKFNPR-AMEAATKYFLTQATASMLLMMGIIINLLFTGQW--TVSKTLNPLASIMMTMALAMKLGLAPFHFWVPEVAQGVSLSSSLILLTWQKIAPLSVMYQISSNTNPNLILTM-AILSVIIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIIMYSPTMMILNLTIYIIMTLTIFMLFMLNSSTTTLSL---SQTWNKMPLITSLILMLMLSMGGLPPLSGFIPKWMIVLELTKNEMIIIPTLLAITALLNLYFYMRLTYATSLTLFPSANNMKMKW-QFETTKKITLL-------PPLIVLSTMLLPLTPMMSILD---MN-ILLALLTNTLLSSLLVLIAFWLPQLNVYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLSTMLTMALLLISLLAASLAYEWTQKG--LEWSE-MSMVYINIFMAFITSLMGLLVYRSHLMSSLLCLEGMMLSLFVMMTMTILNNHFTLASMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTTMLIPLTWLSKPNMIWINSTAYSLLISLISL-MYLNQFGDNSLNFS-LLFFSDSLSAPLLILTTWLLPLMIMASQSHLSKEALTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLVPTLIIITRWGSQTERLNAGLYFLFYTLVGSLPLLVALLYIQSTTGSLNFLIIQYWAKPIS-TTW-----SNIFLWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITVMLSP-ATGQMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTILPLMAAWWLLASLANLALPPTINLVGELFIVVASFSWSNMTIILMGMNIIITALYSLYMLITTQRGKYTHHIKSIKPSFTRENALMALHLLPLLLLSLNPMVVLGPIY------MNAFTSF-MLTAMTTLLLPIFLP---QPKLLKN-KLYPHYVKTT-ISYAFIMSMIPAMMFLHSGKEAIVSNWHWMTIHTLKLSLSFKLDYFSIIFVPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFIVAMAWFLTNLNTWDFQQVIMIQNN-KLNIPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQNKMIQTITLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKSMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLTTLIATS-LTAAYSTRIMFFALLGQPRFNSMILINENNPLLINSIKRLLIGSIFAGYLISYNIPPTTVPQMTMPHYLKFTALAVTIMGFVLALELNLATKNLK--FDHPSNLFKFSTLLGYFPTIMHRFPPMINLTMSQKSASMLLDLIWLENVLPKSISYFQMKSST--VVTNQKGLIKLYFLS---FMITL--ALGLLLL----------NFHE---- +>Alces_alces_Eurasian_elk +----MNENLFASFITPM-IMGLPLATLIVMFPSLLFPTSN-RLVNNRLISLQQWMLQLVSKQMMGIHNTKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTLLIPMLVIIETISLFIQPIALAVRLTANITAGHLLIHLIGGATLALMS-ISNTMALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMIMSMF-LALFIIFQMKVSKHNFHF-NPEPT-LTKMQKQ-NNP-W-EMKWTKIYLP-LS-LPQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVELTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMVPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEEWSASMS----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGVCLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGALLLTLFLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFITIGQLASILYFLIILVLMPVTSTIENNLL---KW--------MF--------MINILMLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLIDMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTILFLGAFHNPILPELYTINFIIKSLLLTISFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPIFLSSI-P-PQT--MNP-IIFIIILSTMMLGTIIVMISSHWLFVWIGFEMNMLAIIPIMMNKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPVASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQIFTSINLNMIMTI-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILPYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTVLILVTLLSMGGLPPLSGFMPKWMIIQEMTKNNNLILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKHMTLL-------PTMVVLSTMLLPLTPMLSVLE---MN-LMLALLTNFTLASLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLGTMLTMALFLILLLAASLAYEWTQKG--LEWTE-MSLVYMNIMTAFAVSLTGLLMYRSHLMSSLLCLEGMMLALFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTTMLMPLTWLSKGNMIWINSTTHSLMISFTSL-LLMNQFSDNSLNFS-LMFFSDSLSMPLLILTMWLLPLMLMASQHHLSKENLTRKKLYITMLILLQLFLIMTFTAMELIFFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYLQNIMGSLNFLILQYWVQPLP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRVTVFLNP-LTEFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYAGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGVNMVITALYSLYMLITTQRGKYTHHINNITPSFTRENALMSLHILPLFLLSLNPKIILGPLY------MNLFSSF-ALITLLLLTIPIMVT---SSDNYKN-SNYPYYVKTT-ISYAFITSMIPTMMFIHTGQEMIISNWHWFTIQTVKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILAMAWFLINLNAWDLQQIFMLNPN-NSNVPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPLTENNKFAQSILLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-FTATYSTRIIFFALLGQPRFPTLIIINENNPFLMNSIKRLMIGSLFAGFIISNNIPPTTIPQMTMPYYLKMMALAVTILGFILALEVSNMTQNLK--FNYSSNIFKFSNMLGYFPTIMHRLAPYMNLTMSQKSASSLLDLIWLENILPKTTSLFQMKMST--MVTNQKGLIKLYFLS---FLVTI--IISMALF----------NFHV---- +>Callithrix_geoffroyi_Geoffroys_marmoset +----MNQNLFASFNIPA-ILGIPLVILIIMLPATFITPTN-NLINNRFSSLQQWLIQLMLKQMMITHSTKGRTWSLMLMALITFIALNNLLGLTPYAFTPTTQLSMNLGMAIPLWAATVLMGLRFKTKLALAHFLPQGTPVPLIPMLIIIETISLFIQPVALAVRLTANITAGHLLMHLLGDTTLTLMS-IYLSSSTITIIIIILLITLELGVALIQAYVFTLLVSLYLHDNSMPQLNISPWPMVILSMI-VTLFFITQLKLLNFTFYT-TPTPK-LTKTQKH-KST-W-ELKWTKIYSL-PS-MSQQS---MFMNRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRAELGQPGSLMEDDHVYNVIVTSHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKVHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSVGSFISLTAVILMIFMIWEAFSSKRKVSTIEQLSTNLEWLYGCPPPYHTFEEATYVKT----------MAAPAQLGLQNAASPIMEELIAFHDHALMIIFLISSLVLYIISLMLTTKLTHTSTMNAQEIEMIWTILPAMILIMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYEDLAFDSYIMPTYFLEPGEFRLLEVDNRTTLPMEADIRVLISSQDVLHSWAVPSLGVKTDAIPGRLNQAMVASMRPGLYYGQCSEICGSNHSFMPIVLEFIYFQDFEVWASYLYIV--------MTHQTHAYHMVNPSPWPLTGALSAFLLTSGMIMWFHFYYTTLLTAGLLASTMTMFQWWRDIVREGTYQGHHTSPVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPQTGGHWPPTGIFPLNPMEVPLLNTAVLLASGVTITWAHHSLMEANRKESIQALSMTIALGVYFTCLQMSEYSETSFTISDGIYGSTFFMATGFHGLHVIIGTTFLTTCYFRQQLYHFTSSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTSPRKTHPLAKIINESFVDLPTPSNISSWWNFGSLLGTCLIIQITTGLFLAMHYTPDTATAFSSVAHITRDVNYGWMIRYLHANGASMFFICLFLHVGRGLYYGSFLFLKTWNIGTILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFTFHFILPFIIAALATIHLLFLHETGSSNPSGITSEPDKVPFHPYYTTKDILGLTFLFLALTSLTLFTPDLLTDPDNYTLANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAMSILVLMIIPMTHTSKQQSMAFRPITQIMFWTLVADLLTLTWIGGQPVEHPFIAIGQTASIMYFLIIITLIPLSALIENKLL---KW--------MF--------MVNLILLIVPALIAMAFLTLMERKVLGYMQLRKGPNIVGPYGTLQPIADAMKLFTKEPLLPTTSTTTLYLTAPTLALSIALLLWTPLPMPYPLINLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLQSLITTQEHYWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFLATSFNMTMPEMYTINFMTKTLLLTTLFLWIRTAYPRFRYDQLMYLLWKNFLPLTLALCMWYISVPILTSGI-P-PQT--MNP-LAHLIISLTILTGTTITILSSHWFLAWMGLELNMLAIVPILAKNTNPR-STEASTKYFLIQATASMILLMAIFLNNLASGQW--TINPPHNQTLSTMMLIALVMKMGMAPLHFWLPEVTQGTPLIPAMIVLTWQKLAPLSIMFQIFPSTNTSIILMI-SILSIMAGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYDPNITILTLIIYIFLTISTFMIFYLNSNMTTLSL---SHTWNKLTWMMPMIPLMMMSLGGLPPLTGFSPKWAIMQELTKNNNLIIPLTMAMLTLMNLYFYMRLTYSISMTMFPTSNNTKINW-QLKHTKPMPLL-------PPLMTLSTLMLPLTPLMLTN----MN-LALALTTSILLALLLITITFWLPQLNTYTEKHNPYECGFDPTTSAHLPFSMKFFLIAITFLLFDLEIALLLPLPWATQTNNLMLTTNMIFTLLIILALGLAYEWSQKG--LDWTE-MPFIYTNVTLAYFMSLLGLLIYRSHLMSSLLCLEGMMLSLFIMTTLTTLNMHTMLMYMVPITLLVFAACEAAVGLALLILISNLYGLDYVQNLNLLQCMLKIILPTIMMLPTMWLSKTHMMWINTMTCSLLINIFTL-MMLYMPN-NSCNLS-LNFFSDPLTSPLLMLTAWLLPLMILATQQHLYNNSAPRKKLYISMLVFLQISLIMTFSATELILFYILFETTLIPTLIIITRWGYQPERLNAGSYFLFYTLAGSLPLLITLLHYFSSLGSLNILTMTINTKEMM-LSW-----TNNIMWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGSYGMMRVTPMLNP-LTEKMSYPFIVLSLWGMVMTS--SICLRQADLKSLIAYSSVSHMALVILAILIQTPWSLTGAMILMIAHGLTSSLLFCLANSNYERVHSRTMMFTRGLQALFPLLALWWLLANLTNLALPPTINLMGELLTILASFSWSNFTIMFTGFNMLITALYSLHMFTSTQRGPLTYSTSNVKPLFTRENTLMLMHMAPILLLTLNPKVTMCFTP--------MHSSM-ILMTMITLLAPIMIT---LINPNKN-LLYPHYVKLA-IIYAFTISILSMTMFIFTGQESVISNWHWMTIQTIKLSLNFKMDFFSIMFTPVALFVTWSIVEFSMWYMSSDPNINQFLKYLLIFLVTMLILITANNLFQLFIGWEGMGIMSFLLISWWHGRTDANTAALQAILYNRIGDIGFILAMTWFFLYSNSWDFQQMFILDRT-PNSFPLMSLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLIIRFHPMMENNPFIQTLTLSMGAITTLFTAICALTQNDLKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLSAGSIIHSLNNEQDIRKMGGLFKTLPFTSSSLIIGSFALMGMPFLTGFYSKDLIIETANTSYTNAWALTTTLVATS-LTAMYSIRIIFFALTGHPRFTTLILINENNPKLMNPINRLALGSIFAGFLISNCVPPTSHPQVTMPWHLKLTALGVTILGLLVATELSLMTNSMK--LSTPLKTFYFSNMLGFYSATTHRLNPHSSLTMSQNLTSALLDLFWLEKSMPKMTTQTQISAST--TSSTQKGLIKLYFLS---FFIPP--MLALLLTI----------------- +>Ceratotherium_simum_white_rhinoceros +----MNENLFTSFATPT-IMGLPIVILIIMFPSIMFPSPN-RLINNRLVSTQQWLLQLTSKQMLSIHNNKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVFLGFRHKTKASLAHFLPQGTPVFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLALMN-ISPTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSITIVSMI-ITLFIMFQLKLSKYSYPS-SPELK-LTKTPTH-TTP-W-ESKWTKTYLP-LS-LPQQS---MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLALPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFMIWEAFASKREVSTVELTTSNLEWLHGCPPPYHTFEEPVYVNL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLVSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHYNSMLLLTLGLMTNLLTMYQWWRDIVRESTFQGHHTLVVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPTPSNISAWWNFGSLLGICLILQILTGLFLAMHYTPDTMTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFIHVGRGIYYGSYTFLETWNIGVILLFTLMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAITHLLFLHETGSNNPSGIPSNMDKIPFHPYYTIKDILGILLLILALLALVLFSPDILGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILTLLIIPFLHTSKQRSMMFRPLSQCMFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFTLILVLMPLAGIIENNLL---KW--------MF--------TINILLLVIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPSTSSTTMFIIAPILALTLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLAEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNAFTTILFLGAFHNPHMPELYTINFTTKTLLLTTSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPITTSSI-P-PQT--MNP-IVFSTILTTAIMGTMIVMTSSHWLMIWIGFEMNLLAIIPILMKKFNPR-AMEAATKYFLTQATASMLLMMAIIINLMFSSQW--TITKIFNPTASIIMTSALIMKLGLSPFHFWVPEVTQGIPLVSGLILLTWQKLAPMSVLYQIAPSINLDMLMTS-ALLSILVGGWGGLNQTQLRKIMAYSSIAHMGWMTAILTYNPTMTALNMLIYIMMTLTTFMLFMLNSSTTTLSL---SHTWNKTPLITSLILITMLSLGGLPPLSGFIPKWMIIQELTKNDSIILPTSMAIMALLNLYFYMRLTYSTSLTMFPSTNNMKMKW-QFENPKRMNFL-------PTLIIMSTLLLPLTPIMSTLN---MN-LMLTLFINTSLASVLVLIAFWLPQLNIYTEKASPYECGFDPMGSARLPFTMKFFLVAITFLLFDLEIALLLPLPWASQTTNLKTMLTMALILISLLAASLAYEWTQKG--LEWAE-MSLIHINVFLAFTTSLMGLLMYRSHLMSSLLCLEGMMLSLFIMATMMVLNSHFTLASMMPIILLVFAACEAALGLSLLVMISNTYGTDYVQNLNLLQCMLKIIIPTLMLIPLTWLSKNSMIWINTTAYSLLISFISL-PLLSQFNENSLNMS-LTFFSDPLSAPLLVLTTWLLPLMIMASQHHLSKEPLARKKLYITMLITLQTFLIMTFTATELIFFYILFEATLIPTLIIITRWGNQTERLNAGFYFLFYTLTGSLPLLIALTHIQNLTGSLNLLLIQYSTQTLP-SSW-----SNAFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMILNP-LTSYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERTHSRTMILARGLQTLLPLMAMWWLLASLTNLALPPTINLVGELFVVMSSFSWSNITIILMGTNIIITALYSLYMLITTQRGKYTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGTLY------MNMFPSL-MLTSLLMLTLPIITT---TINTHKN-STYPYYVKNI-ISYAFITSLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHSDPHITQFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAILYNRIGDIGFIMSMAWFLFNTNSWDLQQIFSLNYN-HTDLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTVQTFTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKAMPFTSTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-LTAAYSTRMIFFTLLGQPRSLTLITINENNPLLMNSIKRLLIGSIFAGFFISNNIYPTTIPKTTMPHYLKLTALAVTILGFMMALELSLATYNLK--LKHPSSPLKFSNLLGYFPTIFHRLPPLMGLSTSQKSASLLLDLIWLEKILPKSISQFQVKTST--LVSNQKGLIKLYFLS---FLVTL--TLSLLLL----------MPHG---- +>Dromiciops_gliroides_monito_del_monte +----MNENLFAPFITPT-ILGISTLPIIMLFPCLILTTPK-RWLPNRIQILQIWLIRLITKQMMSMHNQRGRSWTLMLMSLMLFIASTNLLGLLPYSFTPTTQLSMNIGMAIPLWMGTVVMGFRNKPKVSLAHFLPQGTPTPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLIHLIGSATLALSS-INMTVSTITFTILFLLTILELAVAMIQAYVFTLLVSLYLHDNSMPQLDTSTWFLTITLMI-ISLFCIYQLKMMNQNMISIMAQNEKIKP-TKT-TLP-W-EKKWTKIYLP-HS-SPLLS---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYMLSDMWAKIHFFIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIMSSIGSFISLTAVILMLFIIWEAFASKREVSSVELTTTNIEWLYGCPPPYHTFEQPVFVKS----------MPYPMELGFQDATSPIMEELTYFHDHTLMIVFLISSLVLYILLLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEIYNPYMTVKAMGHQWYWSYEYTDYEDLMFDSYMIPTRDLDPGQFRLLEVDNRMVLPMELSIRMLISSEDVLHAWAVPSLGLKADAIPGRLNQVTLTSTRPGIYYGQCSEICGSNHSFMPIVLEMSTLKYFEKWSSMMQ----------MTHQTHAYHMVNPSPWPLTGALSALLITSGLIMWFHYNSLSLLIIGLTTMLLTMYQWWRDIVREGTYQGHHTPVVQKGLRYGMILFILSEVFFFLGFFWAFYHSSLAPTHELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQMIQALGITIILGMYFTALQAMEYYEASFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCLIRQFHYHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKTHPLMKIVNDSFIDLPAPSNISAWWNFGSLLGTCLVIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNLHANGASMFFMCLFLHVGRGIYYGSFLFKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIVMALTIVHLLFLHETGSNNPSGVNPDSDKIPFHPYYTIKDALGFILMLLVLMLLALFSPDLLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLLIIPLLHTSNQRSLMFRPISQALFWLLTANLFTLTWIGGQPVEQPYIIIGQLASILYFLLILILMPLAGLFENYLLK-PKW--------MF--------IINLLLYIVPILLAVAFLTLIERKVLGYMQFRKGPNIVGPFGLLQPFADAVKLFTKEPLRPLTSSMLMFIIAPILALTLALTIWTPLPMPNTLVDMNLGLLFILALSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKTLIITQENMWMVIVSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIAMNAMTAILFMGTSINLFSPHASSLTFMIKTTALTLMFLWIRASYPRFRYDQLMHLLWKNFLPITLALCLWFISIPIALACI-P-PQI--MSP-YVLMIMSLSLLIGTSLTLFGNNLMTAWMGLEINTLAIIPMMTYPNHMR-ASESAIKYFLTQATASMMIMFAIIYNAWMTNQW--NLFQISNQWASIIMTLALAMKLGLVPFHFWVPEVTQGIPLLSGMVLLTWQKIAPASIMYQISPSLDMKILTLL-AIMSTILGGWGGLNQTHIRKILAYSSIAHMGWMTIIILINPAMTLLNLIIYIFTTLTMFLILNHASVTKIKSL---ANLWNKSAPMTIIILLTLLSLGGLPPLTGFIPKWFILHELVTNNNITMATSMALSALLNLFFYMRIIYAAALTMFPTTNNSKLRW-LHTSTNMTSMI-------PTLTIISSLLLPLSPLLINLMY-MIN-LIIILLVNTLLASIVVLIAFWLPQMYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQLPNPKVTLVFSYGLILLLTAGLAYEWFQKG--LEWTE-MMSINLNLIMAFSLALLGVLIYRSHLMSTLLCLEGMMLSLFVLMALLISHFHMISLSMLPLILLVFSACEAGIGLALLVKTSTNYGNDYIQNLNLLQ-MLKILIPTSMLIPLTWYSKKQWVWINPTMYSLIISSASL-PLLYHNSDLGYNYN-SSFSMDSLSSPLLVLSCWLLPLMMIASQSHLTNEPLLRKKVYLTMLIILQLSLIAAFTSSELIMFYILFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLPLLVALLLMYYNLGSLHILTMSLFSPALN-FSP-----SGSILWYACMIAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITIFTHP-VTTNLAYPFIILSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMGLVIIAALMQSTLSFMGATTLMIAHGLTSSMLFCLANTNYERIHSRTMILTRGLQMILPLMCAWWLLASLANLALPPTINLLGELMVIISSFSWSNFSMILLGINTVITALYSLHMLITSQRGKFTHHMNPIKPSMTREHILMTLHLIPQLIISLSPKFILGLTY------MNMLINTLILLSISILIFPLIIN---IVTPHKT-QHFPLYCKNA-VKLAFFTSLPPTLMFIYSGQESTITNWQWFSISSFNISMSFKLDYFALIFIPIALYVTWSILEFSLWYMHSDPNIHRFFKYLITFLFTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWYGRTDANTAALQAVLYNRIGDIGFMLTMAWLMIHSNSWDLQQIFMTDMN---TLALLGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMLQNNNMTLTTALCLGAITTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLTTLPITSSALMTGSLALIGTPFLAGFYSKDSIIEAMNSSYVNLWALLITMIATA-LTAVYSLRIVYFALLNQPRFPPLSPLNENNPSLINPIIRLALGSIFAGFLLTMNIPPTSMIPLTMPTMTKLSALIVTIAGLFIAMELNKLTNSSP--MLNMIHTHNFSNMLGYFTHLFHRIYPLTNLKLGQHIATMLIDLNWYEKTGPKGQADLHTIASS-SMTSAHKGLIKMYFMS---FIISI--LIITTVI------------------ +>Lepus_sinensis_Chinese_hare +----MNENLFSSFITPT-MMGLPIVILIIMFPTLLFPAPT-RLINNRLVSAQQWLARLILKQMMMMHSPKGRTWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHLLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGAALALIS-ISPTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLVTIIAMI-LTLFTLIQLKFHKYSYPL-SPTPK-MFKSSSF-STP-W-ETKWTKIYSP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLDQTWAKIHFTVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTVSSMGSFISLTAVMVMIFMIWEAFASKREVETVELTTTNLEWLHGCPPPYHTFEEPAYVKA----------MAYPFQLGFQDAASPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTPDLSPGDLRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLISTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSLSMI----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSPSLLLIGLLTNTLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIKPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKNMQQALAITILLGIYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCLLRQLHFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNHSLIDLPAPSNISAWWNFGSLLGLCLMIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWLIRYLHANGASMFFICLYMHVGRGIYYGSYTYLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMIHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDVLGFLMLILMLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIIPFLHMSKQRSMMFRPISQVLFWILVADLLTLTWIGGQPVEHPFITIGQVASILYFSIILILMPLASLVENKIL---KW--------MF--------LINTFLLILPVLLAMAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPLTSSSLLFIIAPTLALTLALSMWLPIPMPYPLINLNMGVLFILATSSLAVYSILWSGWASNSKYALFGALRAVAQTISYEVTLAIILLCVLLMNGSFTLSSLITTQEYMWILFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNIIMMNALTTILFLGSFHSHTNPEMFTVNFAAKTLLLTMTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISMPIMLSSI-P-PHM--MNP-LIFSTILFTLFLGTMITVFSSHWLTMWIGLEMNMLAIIPILINKATPR-STEAATKYFLTQATASMILMMAITLNILDSGQW--TLINPQNHFTPTMIMLALIIKLGMAPFHFWVPEVTQGVPLKSGLILLTWQKLAPLSILYQISPSIDSTMMMLV-AILSIMVGGWGGLNQTQLRKILAYSSIAHMGWMAAIITFNPNTMILNLIIYILLTIPMFMMFIQHTSTTTLSL---SQMWNKTPLMVSAILITLMSLGGLPPLTGFIPKWIIIQELTKNGNIIMPTMMAMLALLNLFFYLRLIYSSSLTMFPTTNNLKMKW-QFEPMKRMTFM-------APLIILSTMFLPLTPMLSVLN---MN-LILVLLINMTISLILVTIAFWLPQLNIYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAAQFNNLNLVLIMALMLISILALGLAYEWIQKG--LEWVE-MPSIYVNIFLAFVFALLGMLVYRSHLMSSLLCLEGMMLSLFILITLTALNTHYTLSFMFPIVLLVFAACEAAIGLALLVMVSNTYGMDYVQNLNLLQCMLKTIIPTIMLIPTVWWSKSQMIWINATAYSLLISLTTF-LLLNQPNDTNLNLS-TTFFSDALSTPLLMLTVWLLPLMILASQHHLGKESLPRKKTYISLLISLQIFLVMTFSATELILFYILFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLMGSLPLLVALIHLQNSMGSLNFLLIQLSNESLL-TSW-----SNSLMWLACMMAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITILLNP-ITEYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTVLPLMAAWWLLASLTNLALPPTINLLGELLIVMASFSWSNLTIILMGTNVLITALYSLYMLSTTQRGKFTYHTNNISPTFTRENTLMILHLTPLLLLSINPKIILGPML------MNLFSTS-VAVSIIILVLPIMVS---FTNIFNH-SNYPYYVKTS-VYYAFMISLIPTLIFIISNQETMVSNWHWMTIHTLKLMTSFKLDYFSMLFTPIALFVTWSIMEFSMWYMHSDPKINQFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFIMAMAWFAINLNTWEFQQIFMSDNN-ITILPLTGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLLENNKTAQTLILCLGAITTLFTALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKTLPFTSSALTIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALIITLIATS-LTAVYSTRIIFFALLGQPRYPTLIIINENNPSLINSIKRLALGSIFAGFLITSLVSPNNIPQMTMPLYMKMTALFVTVLGFSIAMELNQLSLHLK--MSTQSNSFNFSNMLGFFPITMHRLLPYINLSASQNMATLLLDMTWTEKAIPKNISNIQILAST--SVSSQKGLIKFYSLS---FLISM--LLALFILV----------------- +>Neophoca_cinerea_Australian_sea_lion +----MNENLFTSFASPT-MMGLPIVTLIILFPSALFPSPG-RLINNRFTSIQQWLVQLTSKQMMMIHNHKGQAWTLMLMSLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVAMGLRHKTKASLAHFLPQGTPSPLIPTLVIIESISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTN-ISMIAALITFIILVLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTIVSMI-LTLFIVFQLKISKHHFPM-SPELK-PLSAPKT-NIP-W-EKKWTKIYSL-LS-LPLQ----MFVNRWLFSTNHKDIGTLYLLFGAWAGMAGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSLVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFMLDNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFMIWEAFASKREVETIELTSTNMEWLHGCPPPYHTFEEPTFIML-K--------MAYPFQMGLQDATSPIMEELTHFHDHTLMIVFLISSLVLYIISTMLTTKLTHTCTMDAQEVETVWTILPAIILIMIALPSLRILYIMDEINNPSLTVKTMGHQWYWTYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVIESVPLSYFEKWSASMLQ---------MTHQTHTYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSIHLLLLGLMTNILTMCQWWRDVVRESTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGYWPPAGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITILLGLYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLAVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSLIDLPAPSNISAWWNFGSLLAVCLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTLTETWNIGIILLFTIMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFMASALVMVHLLFLHETGSNNPSGISSDSDKIPFHPYYTIKDILGTLFLILILMLLVMFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIVPLLHTSKQRGMMFRPISQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFAILLILMPIAGIIENNIL---KW--------MI--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSTSMFITAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWAGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLPTLITTQEHLWLIFPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTTLFLGAFHSPYMPELYTINFTLKTLTLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPVITASI-P-PQT--MKP-PILIMIMATVVSGTMIVLTSSHWLMIWIGFEMNMLAIIPILMKNFNPR-ATEASTKYFLIQATASMLLMLGIIINLTTSGQW--TILKSLNPMASNLLTIALAMKLGMAPFHFWVPEVTQGTPLSSGMILLTWQKIAPLSVLYQIAPSINPNLLITM-AITSVLVGGWGGLNQTQLRKILAYSSIAHMGWITIIMMYNPTLMLLNLTIYITMTLGTFMLFMYNSSTTTLSL---SHTWNKSPLMTSLILVLMLSLGGLPPLSGFVPKWLIIQELTKNDMIILPTFMAITALLNLYFYMRLSYTTALTLFPSTNNMKMKW-QFENTKKMALL-------SPLIIISTMMLPMTPMMSILD---MN-MILALLTNTILASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHANNLSTTLTMALTLISLLAASLAYEWTEKG--LEWTE-MSMVYFNILMAFSVSFVGLLMYRSHLMSSLLCLEGMMLSLFVMMSMTVLNNHFTLASMAPIILLVFAACEAALGLSLLVMVSNTYGTDHVQNLNLLQCMLKIIIPTIMLMPVTWMSKPHMIWINTTTYGLLISLTSL-PLLNQLNDNSLNSS-LLFFTDSLSAPLLTLTTWLLPLMLMASQFHLSKEPLARKKLYITMLILLQLFLIMTFTATELIMFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALLYLQNNMGTLNFLMAQYWTQTLP-NSW-----SNILLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLSP-LTSFMAYPFMMLSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPLSYMGATALMIAHGLTSSMLFCLANSNYERTHSRIMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELLVVMASFSWSNATIILMGTNIIITALYSLYMLITTQRGKHTHHIKNIKPPFTRENTLMMLHLTPLLLLSLNPKMILGPLY------MNLFTPF-IITTLFMLTMPIILT---STPIYEN-KFYPQYVKTI-VSYAFMTSMIPTMMFISSGQEMIISNWHWMTIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMSSDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRSDANTAALQAILYNRIGDVGFIMTMAWFLTNLNTWDLQQIFMIHYN-DLNMPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNTVMQTITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMIVTIGIGQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKPMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSNTNAWALLLTLMATS-MTAAYSTRMMFSTLLGQPRFNSTVTMNENNPLLINPIKRLLLGSIFAGYLMTLNTPPMMIPQLTMPHHLKLTALAMTLLGFTLALELSTTSLNLK--FSHASNLSKFSNLLGYFPTITHRLVPMMNLAVSQKLASTLMDMVWLEYLLPKSISHLNMKSSI--TISNQKGLIKLYFLS---FMITL--TLALILTT--------ANSHE---- +>Varecia_variegata_ruffed_lemur +----MNENLFASFTTPT-IVEIPIVIIIIMIPSILFPSPA-RLINNRLTSLQQWLIQLVLKQLMTIHNAKGRTWSLMLVSLILFIASTNLLGLLPYSFTPTTQLSMNLGMAIPLWAAAVIKGLRHKTKASLAHFLPQGTPIPLIPVMVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLELIS-IFPSTAPVTLIILILLMILEFAVALIQAYVFTLLVSLYLQDNTMPQLDTSTWLITILSMI-LTLLIVFQLKILKFNYPL-SPVLN-LINKHLY-THP-W-ETKWTKIYLP-HS-LPQQS---MFTNRWFYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKTHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSIGSFISLMAVMLMIFMIWEAFASKREVLMVELTPTNLEWLHGCPPPYHTFEEPTYVKA----------MAHPVQLGFQDAASPTMEELLYFHDHTLMIMFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAAILIXXXXXXXXILYMMDEITSPSLTLKTMGHQWYWSYEYTDYENLCFDSYMIPCSDLKPGELRLLEVDNRVVLPTELSIRTLISSEDVLHSWTVPSLGVKTDAIPGRLNQATLMASRPGVYYGQCSEICGANHSFMPIVLELIPLKHFEEWLLSML----------MTHQTHTYHMVNPSPWPLTGALSALLMTSGLTIWFHFNSNLLLSLGMMTNLLTMFQWWRDIVREGTFQGHHTLTVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPELGGYWPPMGINPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGDRMHMIQALFITIALGIYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTICFLRQLKYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNTRKNHPLMKIMNNSLIDLPAPSNISSWWNFGSLLGACLTLQVITGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFLCLFIHIGRGLYYGSFTLLETWNVGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGINLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALVMVHLLLLHETGSNNPLGIPSNSDKIPFHPYYTIKDFLGLLLLILLTLALVLFSPDLLTDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALFFSILILAIIPLLHTAKQQSMIFRPLSQYLFWILIANLFTLTWIGGQPVEHPYIVIGQTASILYFSLILIIMPLVNLIENKML---KW--------MF--------LINLLLLIIPILLAMAFLTLIERKILGYMQFRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPMLALTIALTMWIPLPLPYPLINMNMGLLFVLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEYLWLIIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGALYNSYSPETYTMNFIIKTLLLIILFLWVRASYPRFRYDQLMHLLWKNFLPLTLAMCMWYISLPILTSCI-P-PQV--MKP-IILMLIMFTIFMGTMLTMISSHWLLMWIGLEINMLAIIPILMKKASPR-STEAATKYFLTQATASMLLMFTIIINMLYSGQW--GITNMHNQLISFMIIMALTMKLGMTPFHLWVPEVTQGVPLTSGMLLLTWQKLAPISIMLQTHPSMNLNTLLLI-ALLSILAGGWGGLNQTQLRKILAYSSIAHMGWMMAILMYCPSMTILNLMIYLMLTIIMFTMLNMYTNTTTLTL---SNLWNKTPITTLMILISLLSLGGLPPLTGFLPKWAIIQELTKNNDITLAVTMAILALLNLYFYMRLMYSTSLTLFPTLNNTKMKW-QFQQMKHMPLL-------SPLIILSTLTLPLSPTLLILN---MN-LPLTLMINITLTLILVTIAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLKLTLTMALILIFTLAAGLAYEWLQKG--LEWTE-MPSIFINIILAFIIALLGMLIFRSHLMSSLLCLESMMLSMFILSTLTILSLHLTTSFMMPILLLVFAACEAAVGLALLVTVSNTYGLDYIQNLNLLQCMLKIIMPMIMMLPMTWYSNKPMIWINTTLHSLTISLVGL-SFLNQLNDNSNNFS-STFFSDPLSSPLMMLTMWLLPLMILASQHHLAKESWTLKKSYLSMLIFLQMLLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLTGSMPLLVALIYVQNYSGSLNLLMMNLCFQELP-NSW-----SNNLLWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITVILDS-LTKFMAYPFFMLCLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATILMIAHGLTSSMLFCLANSNYERIHSRTMLLARGIQAFLPLMSTWWLLASLTNLALPPSINLIGELFVTMTSFSWSNITIILMGLNMLITALYSLYMLTMTQRGKPTYHMCNLNPSLTRENTLMTMHMFPLLLFILNPNTILGPTY------MNMLTSF-TLITLMILTLPIIMN---MTDTHKN-FPYTLYVKSS-IVCAFTTSLIPTMLFIFSGQETTISNWHWMTIQTMKLSMSFKLDHFSMLFMPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYSRTDANTAALQAILYNRIGDIGFILAMAWFLMYSNSWELQQMIMPNYD-SNMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENNKIIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMATIGINQPHLAFLHICNHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKSMPLTASSLMIGSLALTGMPFLTGFYSKDSIIEFTSTSNTNAWALAITLIATS-MTAIYSTRIIFYALLNQPRFTTSVIINENNPLLTNSIKRLMLGSIFTGFFLINYTLPMNIPQTTMPFYLKTLALMMTITGFALAMELNLMTNNLK--FKPSSHMFKFSSSLGFYPMTMHRLIPLFNLHLSQNTASLLLDLIWLEKIMPKSISKLQMLSSI--SVSTQKGMIKLYFLS---FLMSM--LFIPLLIM----------------- +>Nannospalax_galili_ +----MNENLFASFATPT-LMGLPIVIPIIMFPTLFFKTTN-KLINNRVTTAQQWLIKLITKQMMFTHSPKGRTWSLMLTSLIIFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPMWAGAVILGFRYKTKASLAHFLPQGTPITLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLTT-ISLSTASITFLILMMLTILELAVAMIQAYVFTLLVSLYLQDNTMPQLDTSTWSTVIMTSL-VTLFIILQLKLSSFNLTP-TPSPK-QTKFNKT-HNP-W-DKKWTKIYLP-LS-LPLH----MFITRWLFSTNHKDIGTLYLMFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVVVTAHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAVTQYQTPLFVWSVLITAVLLLLALPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFIHWFPLFTGFSLSETWAKIHFAVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNVISSMGSFISLTAVMIMVFMVWEAFASKREVEAVDLTSTNLEWLHGCPPPYHTFEEPTYVKV-N--------MAYPLQYGLQDATSPIMEELMNFHDHTLMIVFLISSMVLYVITAMLTTRLTHTNTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSELKPGELRLLEVDNRVVLPVELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATITSTRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSSTMV----------MTHQTHAFHMVNPSPWPLTGALSAFLLTSGLIMWFHFNSFTLLTIATAGNILTMYQWWRDVVREGTFQGHHTPPVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGINPLNPIEVPLLNTAVLLASGVSITWAHHSLMEGKRNHMIQALLITILLGLYFTLLQASEYLEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLLTCLLRQLNFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKSHPLIKIINHSLIDLPTPSSISTWWNFGSLLGVCLGLQIVTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWMIRYLHANGASMFFICLFLHVGRGIYYGSYHFKETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMVHLLFLHETGSSNPSGLDSNADKIPFHPYFTIKDILGAMVLTITLTSLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPMLHTSAQRSLTFRPISQLLFWMLVADLITLTWIGGQPVEHPFIIIGQVASILYFSIILILMPLAGLVENKIM---KL-------------------MNMLTLLLPILVAMAFLTLVERKTLGYMQLRKGPNVVGPYGVLQPFADAMKLFTKEPLKPLTASLTLFIIAPTLALTLALSLWIPLPMPYPLLNLNLGALFILATSSLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLLSGSFSLLSVISSQELTWFLLPAWPLAFMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALSTIIFLGAVYNPHNPELFTLNFMLKTLILTTMFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISMPMTMASI-P-PYT--MNI-LALTIILLTIFVGSIITILSNHLILMWAGLEMSMLAIIPILMFNSNPR-STEAATKYFLIQATASMILLLAIILNYHDLGIW--QFHHNTQFYIYSLVLIALMMKLGLAPFHFWVPEVTQGVPILSGLLLLTWQKIAPLAIMFHISYYLNTTMVPLS-ALMSVFIGGWGGLNQTQLRKILAYSSIAHMGWMVAVTMYNPTMMLLNLVIYMFLTTSMFITVYICTSTSISSF---TKMWNKSPLLISTTLIILMSLGGLPPLTGFLPKWMIIIELTKNNCIFMALSMTMMALLNLYFYTRLIYASSMTAFPTSNNMKTNT-HHQNSKKHPLL-------SPLIIISSLALPLSPLVSSLY---MN-LLITMMMNISLSMILISVAFWLPQLNLYSDKASPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPIPWAIQYGNLTGVVLTTLGLLIILALGLMYEWFNKG--LEWTE-MTPVFFNLLLTFILSLLGALMFRSHLMSTLLCLEGMILSLFTMTSLITLNSHSMLSFIIPIIILVFAACEAAVGLALLVMVSDTYGTDYVQNLNLLQCMLKIILPSIMLLPLTWFTNNKTVWTNTTCHSLMISLISL-SLLHQDSTNSYNFS-TTFFSDPLSTPLVILTTWLLPLMLLASQNHLSKEQENYKKMYISLLTLLQVFLIMTFTATELMLFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLISLINFNNTFGTLNLVLLSLKQPALS-QSW-----SNHILWLAFMLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRISILLDM-VNKTMAYPFIMLSLWGMVMTS--SICMRQTDLKSLIAYSSVSHMALVIVAVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERTHSRTMMLAQGLQTILPLMGVWWMLGSLANLALPPSINLIGELLIITSSFSWSNLSILMMGMNMIMTAAYTFYMLISSQRGKLTNHTKFLPPTHTRESTIMSLHIIPIILISINPKLILGLP-------MNINVSM-NLLILTTLTTPLLLS---LTSKYNS-NSYPKHVINS-IKLSFLFSLIPLLTFLNNNNELITSNWHWMTINSIKLVMSFKFDYFSYLFIPVALFVTWSITEFSSWYMHSDPNLNRFMKYLLMFLMTMIILVSANNLFQLFIGWEGVGIMSFLLIGWWFGRTDANTAALQAILYNRIGDIGLILSMAWFTIHTNSWELQQIFIFNTN-TDILPLLGILLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLMIRFYPLTQNNQTILTLTLCLGAMTTLFTAMCALTQNDIKKIVAFSTSSQLG--LMFVTLGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKSMPFTSSCLTIGSLALTGMPFLTGFYSKDLIIETLNTSNTNAWALLVTLIATS-MTAVYSTRIIFFVVMSKPHFTPTITMNENNPQLINPINRLALGSILAGFMITSNLPPTNIPTMTMPLSLKLMAITISILGFTVAMDLNNMTSTLK--HKSPTPTHKFTTLLGYFPSIIHRLLPVKSLTMSQNMASNLMDLIWLEKAIPKTIANTQMTASI--ITSNQKGLIKLYSLS---FLMNI--TIISLLTLT--------YYLE---- +>Tapirus_indicus_Asiatic_tapir +----MNENLFASFATPT-MMGLPIVILIIMFPSILFPSSN-RLINNRLISIQQWLIQLASKQMMSIHNHKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVFMGFRHKTKASLAHFLPQGTPIFLIPMLIIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISPTTAFITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFINIMSMI-ITLFIMFQLKISKHLYPH-NLELK-TMKTTGH-STP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLALPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMAFMVWEAFASKREVSTVELTTTNLEWLNGCPPPYHTFEEPVYINL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVKTIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMVPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLVAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSTFEKWSASML----------MAHQTHSYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTLLLYMGLTTNLLTMYQWWRDVIRESTFQGHHTPTVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITISLGVYFTLLQASEYYEASFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPAPSNISSWWNFGSLLGICLILQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIILALVIVHLLFLHETGSNNPSGISSDMDKIPFHPYYTIKDILGFLMLILMLLILVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIIPMLHTSKQRSMTFRPLSQCMFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFSLILVCLPIMGMIENNFL---KW--------MF--------MLNIILLIIPILLAVAFLTLIERKVLGYMQFRKGPNIVGPHGLLQPIADAVKLFTKEPLQPLTSSTSMFIIAPILALTLALTMWIPLPMPHPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFTLSTLITTQEHIWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNTLTAILFLGTSHIPHMPELYTINLTMKTLLLTTLFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPIMTSGI-P-PQT--MNP-MISTTIMTTVILGTIIVMTSSHWLMIWIGFEMNLLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMMAIIINLMYSGQW--TITKIFNPTASIIMTTALIMKLGLSPFHFWVPEVTQGISLASGLILLTWQKLAPMSILYQIPSSINPDMLLTT-AMLSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMTAILIYNPTMTMLNMLVYITMTLTTFMLFMTHSSTTTLSL---SNTWNKTPLITTLILTILLSLGGLPPLSGFMPKWLIIQELTKNNNIILPTLMAITALLNLYFYMRLAYSTSLTMFPSTNNMKMKW-QFENSKQMILL-------PTLTIMSLLLLPLTPMTSILD---MN-LMLVLLINTALASLLVLIAFWLPQLNIYTEKATPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSTNLKTMLTMALILISLLAISLAYEWTQKG--LEWTE-MSLAHINIFLAFMVSLMGLLMYRSHLMSSLLCLEGMMLSLFIMATMMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGMDYVQNLNLLQCMLKIILPTAMLIPLTWLSKKSMIWINTTMYSLLISLISL-PLLNQPNDNSLNFS-LLFFSDSLSAPLLVLTTWLLPLMIMASQYHLSKESLTRKKLYITMLILLQMFLIMTFTATELIYFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALISIQNLTGSLNLLLTQYWTQPLP-NSW-----SNVFLWVACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITIILDP-LTSYMAYPFFMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVATLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVVTSFSWSNITIILMGINITITALYSLYMLITTQRGKYTYHINNVKPSFTRENALMALHLLPLLLLSLNPKIILGITY------MNMFSSL-MLTSLLMLTLPIVTI---TFNHYKN-DLYPYHVKNI-ISYSFIISLIPTMMFIHSGQETIISNWHWMTIQTLKLSLSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHSDPHITQFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFIMSMAWFLSNVNSWDLQQIFMLDPN-HTNLPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKLAQTLTLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALTITLIATS-LTAVYSTRIIFFALLGQPRFPTLITINENNPSLMNSIKRLLIGSIFAGFFISNNIYPTNIPEMTMPHYLKMTALTVTILGFTLGLELGLMTYNLK--LKHPSSLFNFSNLLGYFPTIMHRIPPLMNLSMSQKSASLLLDSIWLETILPKSISHLQMKTST--LISNQKGLIKLYFLS---FLITM--TLSLLLL----------NLHE---- +>Apodemus_peninsulae_Korean_field_mouse +----MNENLFASFITPS-VMGLPIVITIIMFPSILFPSSE-RLINNRLHSFQHWLIKLIIKQMMLIHTPKGRTWTLMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVLLGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISSM-ATLFVLFQLKISSQSFPT-PPSPK-TFSTQKT-KNP-W-ESKWTKIYLP-LS-SPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLDDMWAKTHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLLMIFMIWEAFASKREVLTVTYSSTNLEWLHGCPPPYHTFEEPSYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPMLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGDLRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSTTLLSLGLLANTLTMYQWWRDIIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITILLGLYFTILQASEYFETPFSISDGIYGSTFFMATGFHGLHVIIGTSFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIINHSFIDLPAPSNISSWWNFGSLLGVCLIIQIVTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGMYYGSYTFMETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAVVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGIFILVGFLMTLVLFSPDLLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSLMFRPITQTLYWILVANLLILTWIGGQPVEHPFVIIGQLASISYFSIILILMPLSGIIEDKIL---KWNL------MY--------FINIITLLVPILIAMAFLTLVERKILGYMQLRKGPNVVGPYGVLQPFADALKLFIKEPMRPSTTSISLFIIAPTLSLTLALSLWIPLPMPHPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSFSLQTLIYTQEHMWLIVPTWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYMNIILMNALTSIIFLGPMHKIYYPEFYSINFMTETLILSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWHISLPIFMASI-P-PYM--MNP-ITLIIIYLTILMGPVITMSSTNLLLMWVGLELSLLAIIPLLINKKNPR-STEAATKYFVTQATASMIILLAIILNYKQLGLW--VFQQQTNPLLLNITLIALSMKLGLAPFHFWLPEVTQGIQLHTGLILLTWQKIAPLSMLIQNYYLLDHTIIMIF-SILSIFIGAWGGLNQTQMRKIMAYSSIAHMGWMLAILPFNPTMTLLNLMIYIILTIPMFLVLMFNSSTTMNSI---SLMWNKTPTTLIMIPLILLSLGGLPPLTGFLPKWAIITELLKNNCLIMTTMMAMMALLNLFFYTRLIYSTTLTMFPTNNNSKMLT-HHTNHKYNIIL-------PSLTIISTLMLPLSPQLII-----MN-LAIILLINTTLSLILISVAFLLPYMNLYSEKTNPYECGFDPSSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTTNITTMMTSALILVTILSLGLTYEWTQKG--LEWTE-MSSAFINLTLAFTLSLLGTLTFRSHLMSTLLCLEGMMLSLFIMTSMASLNANSMASMPIPITILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIIFPSLMLLPLTWLSKPKMTWTNVTSYSFLISLISL-SIMWQTNETPLNFS-TMFSSDPLSTPLIILTTWLLPLMLMASQNHLKKEKTMHQKLYISLLVSLQILLVMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIGSIPLLIALIFMQTSMGTLNFSLLSLMPSPLD-SLW-----SNNILWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGSYGMMRIAIMLDP-LTKFMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSFMGATMLMVAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMVFPLMATWWLVASLANLALPPSINLIGELFITMSLFSWSNFSIILMGINIIITGMYSMYMIITTQRGKLTSHMNNLQPSHTRELTLMALHIIPLLLLTTSPKFITGFTM------MNTITSS-IMAIFIVLLTPILIS---STNMLKQ-INFPLYATMS-IKLSFFLSLLPLMMFFYYNTEYMITTWHWMTINSIELTMSFKMDYFSIMFLSVALFVTWSIMQFSSWYMHSDPHINRFIKYLLLFLITMLILTSANNLFQLFIGWEGVGIMSFLLIGWWFGRSDANTAALQAILYNRIGDIGFILAMTWFCLNMNSWELQQILLT-EN-NNLIPLLGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPLTSNNPKILTMMLCLGGLTTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGNMMKTMPFTSSCLTIGSLALTGMPFLTGFYSKDLIIEAMNTCNTNAWALMITLIATS-MTAIYSMRIIYFVTMTKPRFPPMILINENDPNLMNPIKRLALGSIMAGFFISYNIPPTNIQILTMPWYLKTTALFISILGFLMALELNNLTLKLS--MNKKNLYSSFSTSLGYFPLIIHRIIPNKTLNLSLKTSLNLLDLYWLENSIPKPISTMHSYASK--LLTNQKGLVKLYFLS---FFLSI--LLTVILYII---------NLE---- +>Saguinus_oedipus_cotton-top_tamarin +----MNQNLFTSFNIPV-ILGIPLAVLIIMFPTMLIIPPK-NLINNRLSSIQQWLVQLTLKQMMTSHTPKGRTWSLMLLSLITFIALNNILGLTPYAFTPTTQLSMNLGMAIPLWAATVLMGLRFKTKSSLAHFLPQGTPIPLIPMLIIIETISLVIQPVALAVRLTANITAGHLLMHLLGDTALTLMS-IYLSSSTITIIIIILLITLELGVALIQAYVFTLLVGLYLHDNSMPQLNISPWPMVITSMI-VTLFFVIQLKMLNFTFHI-NPPSK-SMKTQKH-KTT-W-NLKWTKIYLP-PS-TFQ-----MFTNRWLFSTNHKDIGTLYLLFGAWAGAVGTALSFLIRAELGQPGSLFEDDHVYNVIVTSHAFIMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGASVDLVIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNIISSVGSLISLTAVMLMIFMIWEAFSSKRKVSTIEQLSTNLEWLHGCPPPFHTFEEATYVKALSEKG-----MATPAQLGLQNATSPIMEELIAFHDHALMIIFLVSSLVLYTISLMLTTKLTHTSTMNAQEIETIWTILPALILITIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYEDLYFDSYIMPTYFLEPGEFRLLEVDNRTTLPMEADIRMLITSQDVLHSWAVPSLGVKTDAIPGRLNQAMLASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWASYLYIV--------MTHQTHAYHMVNPSPWPLTGALSAFLLTSGLIMWFHFYYTLLLIAGLLASTMTMFQWWRDVVREGTYQGHHTAPVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPQTGGQWPPTGILPLDPMEVPLLNTAVLLASGVTITWAHHSLMEADRKESTQALLMTIALGTYFTYLQLSEYSETSFTISDGIYGSTFFMSTGFHGLHVIIGTTFLTTCYFRQQLYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTSPRKTHPLAKIINNSFIDLPTPSNISSWWNFGSLLGTCLMIQITTGLLLAMHYTSDTATAFSSVAHITRDVNYGWMIRYLHANGASMFFICMFLHIGRGLYYGSFLFLKTWGVGTILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFTFHFILPFIIAALATIHLLFLHETGSSNPSGMTSEPDKIPFHPYYTIKDILGLMFLLLLLTSLTLFSPDLLTDPDNYTLANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILMVVPMLHTSKQQSMAFRPVTQALFWTLVADLLTLTWIGSQPVEYPYMTVGQTASIMYFLIIIILIPLSALIENKLL---KW--------MF--------MINLLVVILSALVAMAFLTLTERKVLGYMQFRKGPNIVGPYGTLQPIADAMKLFTKEPLLPTSSTSTLYLIAPTLALSISLLLWTPLPMPYPLMNFNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLQSLITTQEHSWLLFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFLAAPHNTAAPETYTINFMTKTLLLTTLFLWIRTAYPRFRYDQLMHLLWKNFLPLTLALCMWYISMPTLTSGI-P-PQT--MNP-LAHLIISFTIMTGTAITILSSHWFLIWMGLELNMLAIIPVLAKNMKPR-STEASTKYFLTQATASLILLMAIILNNLISGQW--SINPPLS-MLSTIMLIALTMKLGMTPFHFWLPEVAQGIPLIPAMIILTWQKLAPMSIMIQISSSMNTSVLLMI-SVLSIMAGSWGGLNQTQLRKILAYSSITHMGWMLAVLHYSPNITILTLTIYILLTTSSFLTFYSNSNVTTLSL---SHTWNKLTWMMPMIPLMMMSLGGLPPLTGFSPKWTIMLELTKNNYLTLPLMMALLTLMNLYFYMRLTYSISMTMFPTSNNTKINW-QLKHIKPMPLL-------SPLMISSTLLLPLTPLMLMV----MN-LVLTLTTSAFLALLLITIAFWIPQLNMYTEKHNPYECGFDPTTSAHLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNLMLTINTTFTLLIILVLGLVYEWTQKG--LDWVE-MPFIYINVMLAYFMSLLGLFIYRSHLMSSLLCLEGMMLSLFIIITINALNMHLMLMYMMPIALLVFAACEAAVGLALLVMISNMYGLDYVQNLSLLQCMLKIMMSMIMVLPAMWLSKTHMMWINMMTCSLLVNIFTL-LVLYVPN-NLCNVS-LTFFSDPLASPLLMLTAWLLPLMLLATQQHLYSDSTARKKLYLSMLIVLQISLIMTFSAAELILFYILFETTLVPTLIIITRWGYQPERLNAGSYFLFYTLMGSLPLLITLLYHLATWGSLNLFTMMISTKQVL-PSW-----TNDIMWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITPMLDP-VTEKMGYPFLILSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVILAILIQTPWSLTGAMILMIAHGLTSSLLFCLANSNYERIHSRAMMFTRGIQTLFPLLALWWLLANLANLALPPTINLIGELLTILASFSWSNFTIVFTGSNMLITALYSLHMLTSTQRGPLSYSTSNVKPLFTRENTLMLMHVAPMLLLILNPKTIVGLVP--------MYSSM-ILMTMIPLLSPIVIT---FINPDKT-ILYPHYVKLA-IIYAFTASTLSMVMFIYTGQESMMSNWHWLTIQTIKLSLNFKMDFFSMMFTPVALFVTWSIVEFSMWYMNSDPNINQFLKYLLTFLITMLILITANNMLQLFIGWEGMGIMSFLLISWWYGRTDANTAALQAILYNRIGDVGFISAMAWFFLHSNSWDLQQMFMLNTY-PNSFPLISILLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLIIRFHPLMENNSLTQTMILSLGAITTLFTAICALTQNDLKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCAGSIIHSLNNEQDIRKMGSLFKTLPFTSSSLVAGSFALMGMPFLTGFYSKDLIIETANTSYTNAWALTTTLMATA-LTAMYSIRIIFFTMTGHPRFTTLASINENNPLMMNPISRLAVGSIFAGFLISNCVPPTSYPQVTMPFHLKLTALSVTILGLLVATELSLMTNNTE--LSTPLKTYYFSNMLGFYSTITHRFNPHSNLTTSQNIISTLLDLFWLEKSMPKMTTQTQMSISM--ASSTQKGLIKLYFLS---FFIPP--TLALVLII----------------- +>Pipistrellus_abramus_Japanese_house_bat +----MNENLFASFITPT-LMGLPIVVVIITLPGIFFPSSN-RLINNRLVAVQKWLIRLITKQMMAIHSKKGQTWALMLMSLIMFIGSTNLIGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISMTTAFITFIILVLLTMLEFAVALIQAYVFTLLVSLYLHDNAMPQLNTSTWFITIMSMI-LTLYIIFQLKISKHYYYY-NPEPS-TTKSQKH-TTP-W-ETKWTKIYLP-LS-LPLH----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLSTTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLAAVVLMVFMVWEAFASKREVLVVELPSTNLEWMHGCPPPYHTFEEPTYVNH-K--------MAYPFQLGFQDATSPIMEELLSFHDHALMIVFLISSLVLYIISLMLTTSLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSVTIKTLGHQWYWSYEYTDYEDLMFDSYMIPTHELDPGQLRLLEVDNRVVLPAELTIRMLISSEDVLHSWAIPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMIPLKYFEKWSSSMM----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSTSLLMIGLITNMLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITTLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRTQVLQALLITIILGLYFTLLQASEYYETPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINSSFIDLPTPSNISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWILRYLHANGASMFFICLYLHVGRGLYYGSYLFKETWNMGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTDLVEWIWGGFSVDKATLTRFFAFHFVLPFIISALVMVHLLFLHETGSNNPTGIPSDMDMIPFHPYYTIKDILGLFLMILALLSLVLFSPDMLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIIIPLLHTSKQRSMTFRPLSQCLFWLLTADLLTLTWIGGQPVEHPYVIIGQLASILYFMIIIVIMPLASLTENYLL---KW--------MY--------FVNLLTTIIPVLLAVAFLTLLERKMLGYMQLRKGPNIVGPYGLLQPIADAVKLFIKEPLQPLTSSLTLFIIAPTLALTLALMMWVPLPMPYPLINMNLSILFMLALSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSILLMNGSFTLSMLITTQEHIWLIFPSWPLAMMWFISTLAETSRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTIILFLGAYNNTTFPEMYTTNFMMKALLFTTFFLWIRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHVAIPIILASI-P-PQT--MNP-VTFSLIIMTMMLGTLLVMTSSHWFLVWVGFEMNMLAIIPLLTKQHNPR-STEAATKYFLTQATASMLLMMAATINLLYTGHW--SILKMNNSMASITMTMALAMKLGLSPFHFWVPEVTQGTPLSSGLILLTWQKLAPLSILYMISPLMNPDLLMFM-ALLSVAIGGWGGLNQTQLRKIMAYSSIAHMGWMMSILTYNPTMMLLNLYIYIPMTITTFLLLMTNSSTTMNSL---SHMWNKLPLITMIIFITMLSLGGLPPLTGFLPKWLIIQEMTKNNNIIMTTIITLLSLLNLYFYTRITYSTSLTMFPTTNNTKIIW-QFKSPKQMTSL-------PAMIIISTLILPMSPMMLILE---MN-FMLTLFTNTLLALLLVTIAFWLPHMNTYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDKLLVMLSMSLALIMLLIISLAYEWMQKG--LEWSE-MSLTYFNVMLAFTMSFLGLLMYRSHLMSSLLCLEGLMLSLFVLVTITILITHSTLNSMLPIILLVFAACEAALGLSLLVAVSNTYGLDHVQNLNLLKCMLKIILPTMMLIPLTWLSKKNMMWINSTTYSLAITMTCL-PLMNLPCDNSLNMS-LLFFSDPLSTPLLLLTVWLLPLMIMASQYHLSKESDSQKKLYITMMVFLQVFLIMTFSATELIMFYILFEATLVPTLIMITRWGGQTERLNAGIYFLFYTLAGSLPLLIALIYTQTTLGSLNLLLIQYWTYPST-QMW-----TDSALWLAYMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMMLSPITTNFMAYPFLLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAILIQSPWSFMGATALMVAHGLTSSMLFCLANSNYERTHSRTMILARGLQTILPLMATWWLLASLMNIALPPSINLTGELFVTVAMFSWSHLTMTLLGINITITALYTLYMLISTQRGKYTYHIHNIKPSFTRENTLMMLHMTPLLLLMIKPQIILGTIY------MNAFSAM-MLLSLTILFMPLMDS---INSNSNT-KSYPEYVKTT-ISYSFMISLIPTIMFIQSGQEMTILNWHWMTIQTMKLSLSFKLDFFSMMFMPIALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLITMMILITANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMKNSNSWEIQQIFMLNPE-NMTLPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPMMENNKTITTLALCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGALIKPKPFTTTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLLTLIATS-LTAVYSTRIIFFTLLGKPRFPPLVLINENNPMLMNPIMRLMIGSIFAGFIISNNILPSTVPQMTMPLHLKITAIVVTLMGFTLALELSHMTQNLK--YPYPSITSKFSTMLGYFPPVIHRINPFMTLLMSQKSATMLMDLIWLENILPKLAAKIQQNFST--TITNQKGLVKSYFLS---FLITI--ITMMLLF----------NFLV---- +>Mammut_americanum_American_mastodon +----MNEGLSTFFDVPM-----GTMTLIVAFPAILLPTTN-RLITNRLVTIQQWLIQLIMKQLLTIHNTKGLSWSLMLITLTLFIGLTNLLGLLPYSFTPTTQLAMNLSMAIPLWTGTVILGLRHKTKVSLAHLLPQGTPTFLIPMIIVIETISLLIRPITLAVRLTANITAGHLLIHLTGTATLTLLS-IHPMTITVTFITMILLTILELAVALIQAYVFALLVSLYLYENAMAQANIIILLLVAAIVL-ITLAIFLHIKVLNILYFL-FPASK-EFSKKSY-IFP-WKKKKWTKDYPP-SSMYP------MFANRWLYSTNHKDIGTLYLLFGAWAGMVGTAFSILIRAELGQPGSLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILSAINFITTIINMKPPAMSQYHMPLFVWSILVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMVSHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGDIKWSPAMMWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLNYTWAKIQFMVMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTAWNTASSMGSFISLMAVILMVFMIWEAFASKRKVSTVELTMTNVEWLNGCPPPHHTFEEPAYVKS-NS-------MAYPLQLGFQDATSPVMEELIHFHDHTLMIIFLISSLVLYIILLMLTTKLVHTNMMNVQEMEMIWTILPAAILILIALPSLHTLYMMDEINNPLLTVKTMGHQWFWSYEYTDYEDLAFDSYMITANDLKFGELRLLEVDNRMVLPTDLPVRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQVTLTSTRPGLFYGQCSEICGANHSFMPIVLELVPLKHFESWSTSLA----------MTHQTHAYHMVDPSPWPLTGALSALLMTSGLIMWFHYHSGIILILGLMTNILTMFQWWRDVIREGTFQGHHTPIVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPAPELGSYWPPVGIYPLNPLEVPLLNTSVLLASGVTITWAHHSLMEGNRKNMLQALLITILLGAYFTLLQIFEYYEASFTISDGIYGSTFFVTTGFHGLHVIIGSTFLLICFIRQLEFHFTSNHHFGFEAAAWYWHFVDVVWLFLYLSIYWWGS--MTHIRKSHPLFKIINKSFIDLPTPPNISAWWNFGSLLGACLITQILTGLFLAMHYTPDTMTAFSSMSHICRDVNYGWTIRQLHSNGASIFFLCLYAHIGRNIYYGSYLYSETWNTGIMLLMITMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGTSLVEWIWGGFSVDKATLNRFFALHFILPFMMATLAGVHLTFLHESGSNNPLGLTSNSDKIPFHPYYTIKDFLGLLILILLLLLLTLLSPDMLGDPDNYTPADPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVMALLLSILILGLMPFLHTSKYRSMTLRPLSQILFWTLTMDLLMLTWIGSQPVEYPYIIVGQTASVLYFSIILALLPIAGMIENHLI---K---------MF--------LINVLTVTLPILLAVAFLTLIERKALGYMQLRKGPNVVGPYGLLQPVADGIKLFTKEPIYPQTSSKFLFTIAPILALTLALTVWAPLPMPYPLVNLNLSLLFILAMSSLMVYSILWSGWASNSKYALMGALRAVAQTISYEVSMTTIILSMVLMNGSFTLTAFATTQEHLWLVFPMWPLMMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFMAEYANIIMMNALTAILFLGTSCNPQAPEISTINFVLKTIILTICFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISILISLACI-P-PQT--MNP-LTLSLILTTLFTGTLITMLSSHWLTAWMGLEMNMLTMIPILTKTTNPR-STEAATKYFMTQTMASMTLMMAFTINLMYSGQW--SIMKMTNPMASTMALMALMTKLGMAPFHFWVPEVTQGIALTSGMILLTWQKLAPLSLLYQMATYANTNLICLS-GLLSILIGGWGGLNQTQLRKILAYSSISHMGWMLIILIFNPTLTLLNLTIYVLLTLSIFMILANTFTTSMASL---TLMWNKTPAMAIMLMITLLSLGGLPPLSGFMPKWLMIHELTKNNSIIMPLSMAIASLLNMYFYMRLIYSSSLTILPSTNNMKMTW-QFTNTKNMAML-------PTLIILSNMLLPLTPIISMLE---MN-LMATLLTNMMLTSLMILIAFWLPQTYTYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQVNNPNLMLLMAFMLIILLATGLAYEWLQKG--LEWAK-MPYIYMNIMLAFIISLTGALMYRSHLMSSLLCLEGMMLSLFTLNALLALNMNFALSTMVPLILLVFAACEAAVGLALLVVISNTYGLDYVQNLNLLQCMLKIILPTIMLIPLTWLTSNNMVWINTTLYSFMISLISL-HFLYQPLDNNLNLS-TEFFLDSLSTPLLVLTIWLLPLMLIASQSHMSPGSTFQKKSYITTIILLQVSLIMTFTATDLVLLYIMFETTLIPTMIIITRWGNQLERLNAGSYFLFYTLMGSLPLLVTLMLIQNILGSLNLMMLPYLTKPIN-NLW-----STNTLWLTCITAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITILLDP-LTTYMSYPFLMLSLWGMIMSS--SICLRQTDMKSLIAYSSVSHMALVIIAIMLQTPWSFMGALALMIAHGLTSSMLFCLANSNYERIHSRTMILTRGLQTLLPLMATWWLLASLINMAPPPTINLIGELLIITASFSWSNLTIFPMGLNVLITTMYTLHMLTTTQRGKTPHHTKSIKPSFTRENTLMVLHLLPLLLLSLNPKITLGLVY------MNLTSTL-TLTSLIILILPIITT---LLQNNET-NYFPHLTKTA-VTCAFMVSLIPALLFIQSNQEAYISNWHWMTIHALKLSLSFKLDLFSLTFMPIALFITWSIMEFSLWYMHSDPHTNRFFKYLLLFLITMLILVSANNLLQLFMGWEGVGIMSFLLISWWHGRADANTAALQAMLYNRIGDVGFIMMMAWFIIHLNSWEFQQIFLIDPK-NSTLPLLGLLLASAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVMAGVFTLIRFYPLMENNSTVQTLTLCLGAITTLFTAICALTQNDIKKIIALSTSSQLG--LMMVTIGINQPHLAFIHMCTHAFFKAMLFLASGSIIHNLNNEQDIRKMGGLYKTMPITSTAIIIGSLALTGMPFLTGFYSKDPIIETANMSYTNTWALLMTLVALS-MTASYSARIIFFALLGQPRHSTLTQISENNPHLTNPIKRLMLGSMFMGFLISMNTIPHTTPQMTMPPYLKLTALTITLLGFMVAMELNNMTRNLM--FKQPSYMHKFSNMLGYYPTTTHRILPYLGLTMSQNLATTIMDLIWLEKMIPKNLAIMQKTAAS--LVSNQKGLMKPYFLS---FLLSI--TLGLLIAL----------------- +>Naemorhedus_baileyi_red_goral +----MNENLFTSFVTPM-MLGLPLATFIVLFPSLLFPTSN-RLINNRLISLQQWLLQLMSKQMMSIHNIKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHLLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATFALMK-ISTTAAFITFIVLVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLMMILSMF-LTLFIVFQLKISKHNFHY-NPELT-ATKTPKQ-NNP-W-ETTWTKIYLP-PS-LPL-----MFTNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIIALMLTTKLTHVSTMDAQEVETIWTIMPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAVPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSVTLLALGLTTNMLTMYQWWRDIIRESTYQGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYMSIYWWGS--MTSIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWMIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPTGIPSDTDKIPFHPYYTTKDILGTMLLILILMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILVLVPFLHTSKQRSMMFRPFSQCVFWILVADLLTLTWIGGQPVDHPYIIIGQLASIMYFLIILVLLPVASTIENNLL---KW--------ML--------MINILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFIKEPLRPATSSTSMFILAPILALSLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQMWLIFPTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYVPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-ITFIVILMTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLMMMAIIINLMFSGQW--TVMKLFNPTASMLMTMALTMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQTLPSINLDLILTL-SILSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SRTWNKMPIMTVLTLVTLLSMGGLPPLSGFMPKWMIIQEMTKNNSIILPTLMAITALLNLYFYMRLVYSTTLTMFPSTNNMKMKW-QFSITKRMTLL-------PTMTVLSTMLLPLTPILSILE---MN-LMITLLTNFTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFATSLVGMLMYRSHLMSSLLCLEGMMLSLFVMAALTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNSMVWINPTLHSLLISLTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKESLTRKKLFISMLILLQLLLIMTFTATELISFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNVIGSLNFLILQYWVQPMP-NSW-----SNIFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLLLNP-MTDFMSYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRTMILARGLQTLLPLMATWWLLASLTNMALPPTINLIGELFVMMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMALHMLPLLLLSLNPKVILGPLY------MNLFSSF-TLMTLVLLTAPIMAI---NLNTCKH-SNYPFYVKTT-ISYAFITSMIPTMMFIHTGQETVISNWHWLTIQTLKLSLSFKMDYFSMMFIPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFVGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLKPD-NSNLPLMGLTLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNEFAQSIMLCLGAMTTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLLKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFTLLGQPRFPTLITINENNPLLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPYYLKMTALAITTLGFILALETSNMTHNLK--FNHPSNIFKFSNLLGYYPTIMHRLVPYTNLTMSQKSASSLLDLIWLETILPKTISTTQVKMAT--MVTNQKGLIKLYFLS---FLITI--LISMILF----------NFHE---- +>Cephalophus_jentinki_Jentinks_duiker +----MNENLFASFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLVNNRLISLQQWLLQLISKQMMSIHNPKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-INTTTALVTFIILILLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYL-NPELT-SMKTSKQ-STP-W-ETKWTKICLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLAXSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNATWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLMLGLTTNMLTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHMGRGLYYGSYTYTETWNIGVILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFIFPFIIVALAMIHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILALMILVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPMASTIENNLL---KW--------MF--------MINILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTVNFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFFIILMTVVFGTMIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASIKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLDLILIL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNPTMMLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTVLVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFYITKRMTLL-------PTMVVLSTMLLPLTPILSILE---MN-LMLALLTNLALATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLAXSLAYEWTQKG--LEWTE-MSLVFMNIMVAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFVMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTMHSLLISLTSL-LLMNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQNHLSKENLTRKKLFITMLILLQLFLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIHIQNMXGSLNFLILQFWTQPMS-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-XTXFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSSFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLLLLTIPIMMT---SSPSYKT-PNYPLYVKTT-ISYAFLTSMIPTMMFIYTGQEAIISNWHWLTMQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPN-NSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSTMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLITINENNPFLINSIKRLLIGSLFAGFIISNNIPPTTVPQMTMPYYLKMMALVVTVLGFVLALEISNMTRNLK--FNYPSNTFKFSNLLGYYPTIMHRLTPYLNLTMSQKSASSLLDLIWLENILPKTTSLIQMKMST--MITSQKGLIKLYFLS---FLVTI--LISTILF----------NFHE---- +>Cephalophus_nigrifrons_black-fronted_duiker +----MNENLFASFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLINNRLISLQQWLLQLISKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-ISTTTALITFIILVLLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYL-SPELV-LMKTSKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLMLGLTTNMLTMYQWWRDIVRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGBRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTYMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGISSDTDKIPFHPYYTIKDILGALLLVLALMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPFLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPMASTIENNLL---KW--------MF--------MVNILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTVNFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFFIILLTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLSNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLDLILIL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLIIYIIMTSTMFALFMANSTTTTLSL---SHTWNKMPVMTVLILVTLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSILE---MN-LMLALLTNLALATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLILLLAVSLAYEWTQKG--LEWTE-MSLVFMNIMLAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINPTMHSLLISLTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQNHLSKESLTRKKLFITMLILLQLFLIMTFTATELILFYVLFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIHIQNTTGSLNFLVLQYWAQPMP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRVTLLLNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLLLLTIPIMMT---SSPTYKT-SNYPLYVKTT-VSYAFLISMVPTMMFIYTGQEAIISNWHWLTMQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLDSN-NTNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLVATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLVGSLFAGFIISNNIPPTTIPQMTMPYYLKMTALAVTILGFILALEISNMTHNLK--FNYPSNTFKFSNLLGYYPMIMHRLTPYLNLTMSQKSASSLLDLIWLESILPKTTSLIQMKMST--MITSQKGLIKLYFLS---FLITI--LVSTILF----------NFHE---- +>Cephalophus_adersi_Aderss_duiker +----MNENLFASFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLVNNRLISLQQWLLQLISKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LALFIIFQLKISKHNFYL-NPELM-STKMSKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNATWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGIYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTYTETWNIGVILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLVLALMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILILMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPVASTIENNLL---KW--------MF--------MINILTLIIPILLAVAFLTLVERKILGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTVNFTVKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFSIILMTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPYINLNLILTL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAILLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTVLVLVTLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMIVLSTMLLPLTPILSILE---MN-LMLALLTNLTLATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLAVSLAYEWTQKG--LEWTE-MSLVFMNIMVAFTVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTMHSLLISLTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQNHLSKENLTRKKLFITMLILLQLFLIMTFTATELILFYVLFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALTYIQNTMGSLNFLILQYWAQPMP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLLLNP-VTNFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLMTTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLFLLTIPIMAT---SLPTYKT-SNYPLYVKTT-ISYAFLISMIPTMMFIYTGQEAIISNWHWLTMQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPN-NSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPTTIPQMTMPYYLKMTALAVTILGFILALEITSMTHNLK--FNYPSNTFKFSNLLGYYPTIMHRLTPYLNLMMSQKSASSLLDLIWLENILPKTTSLIQMKMST--MVTSQKGLIKLYFLS---FLITI--LISMILF----------NFHE---- +>Cephalophus_callipygus_Peters_duiker +----MNENLFASFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLVNNRLISLQQWLLQLISKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYL-NPELV-SMKTLKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLTEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYAYMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILVLMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPMASTIENNLL---KW--------MF--------MINILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPVLALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTVNFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIFIIILMTVMLGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLDLILIL-SVLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTVLVLVTLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTFMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSILE---MN-LMLALLTNLTLATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLAVSLAYEWTQKG--LEWTE-MSLVFMNIMMAFAVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTMHSLLISLTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQNHLSKENLTRKKLFITMLILLQLFLIMTFTATELILFYVLFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVYIQNTTGSLNFLILQYWAQPMP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIVLMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLFLLIIPIMMT---SFPTYKT-SNYPLYVKTT-ISYAFLISMIPTMMFIHTGQEAIISNWHWLTMQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPN-NSNLPLMGLILAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLAQSIMLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLIGSLFAGFIISNNIPPMTTPQMTMPYYLKMTALAVTILGFILALEISNMTHNLK--FNYPSNTFKFSNLLGYYPMIMHRLTPYLNLTMSQKSASSLLDLIWLENILPKTTSLIQMKMST--MVTSQKGLIKLYFLS---FLITI--LISTILF----------NFHE---- +>Cephalophus_ogilbyi_Ogilbys_duiker +----MNENLFASFITPM-MLGLPLVTLIVLFPSLLFPTSN-RLVNNRLISLQQWLLQLISKQMMSIHNPKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMN-ISTTTALITFIILVLLTILEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYL-SPELV-SMKTLKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFVNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNTTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYAYMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGISSDADKIPFHPYYTIKDILGALLLILVLMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPMASTIENNLL---KW--------MF--------MINILTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPVLALSLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHSPYMPELYTVNFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IIXXIILMTVMFGTIIVMISSHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAVIINLMFSGQW--TVMKLFNPTASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQISPSINLDLILIL-SMLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMMLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKMPVMTVLVLVTLLSMGGLPPLSGFMPKWMIIQEMTKNDNIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFSTTKQMTLL-------PTMVVLSTMLLPLTPILSILE---MN-LMLALLTNLTLATLLVIIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALFLIFLLAVSLAYEWTQKG--LEWTE-MSLVFMNIMMAFAVSLAGLLMYRSHLMSSLLCLEGMMLSLFVMATLTILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNNMIWINSTMHSLLISLTSL-LLMNQFGDNSLNFS-LIFFSDSLSTPLLILTMWLLPLMLMASQNHLSKENLARKKLFITMLILLQLFLIMTFTATELILFYVLFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIYIQNTTGSLNFLILQYWAQPMP-NSW-----SNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITLLLNP-VTDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTFLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIVLMGLNMVITALYSLYMLITTQRGKYTHHINNISPSFTRENALMSLHILPLLLLSLNPKIILGPLY------MNMFSSF-TLMTLFLLTIPIMMT---SSPTYKT-SNYPLYVKTT-ISYAFLISMIPTMMFIHTGQEAIISNWHWLTMQTLKLSLSFKMDYFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPS-NSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKLAQSIMLCLGAITTLFTATCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKTMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQPRFPTLIIINENNPFLINSIKRLLVGSLFAGFIISNNIPPMTTPQMTMPYYLKMTALAVTILGFILALEISNMTHNLK--FNYPSNTFKFSNLLGYYPMVMHRLTPYLNLTMSQKSASSLLDLIWLENILPKTTSLIQMKVST--MVTNQKGLIKLYFLS---FLVTI--LVSTILF----------NFHE---- +>Neotetracus_sinensis_Shrew_gymnure +----MNENLFASFITPM-FLGIPVFIFITMFPILFFPSPS-RLINNRTVTLQQWVIKLTSKQMMSIHSHKGQTWTLMLTSLIMFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVILGFRFKTKASLAHFLPQGTPLALIPMLILIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALTS-ISPPTALLSFIILLLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFWTIIFML-ITLFILFQLKMSSHLFFH-NPEAK-KLKRISH-DNP-W-ETKWTKIYSP-LL-LPQYF---MFVNRWLFSTNHKDIGTLYMIFGAWAGMVGTSLSLLIRAELGQPGALLGDDQIYNVIVTAHAFIMIFFMVMPIMLGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLIASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIVNMKPPALSQYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGCIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIGGFVHWFPLFSGYTLDSTWAKIHFIVMFVGVNITFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMMMVFMVWEAFASKREVEKVELTSTNIEWLYGCPPPYHTFEEPTFINS-K--------MAYPFEFGLQDASSPIMEELLYFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEMNNPSLTVKTMGHQWYWSYEYSDYEDLCFDSYMVPTSDLNPGQLRLLEVDNRVIIPTELTVRILISSEDVLHSWAIPSLGLKTDAIPGRLNQMTLLATRPGLYYGQCSEICGANHSFMPIVLETVPLEAFEKWSYSLT----------MTHQTHAFHMVNPSPWPITGALSALLLTSGLIMWFHYNSSILLILGVLTNFLTVFQWWRDIIREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGLWPPAGIQPLNPLEVPLLNTTVLLASGVSITWAHHSLMEGNRMNTIQALAITILLGIYFTILQAMEYYEAPFTISDGVYGSTFFMATGFHGLHVIIGSTFLLVCFIRQLLFHFTHNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTNLRKSHTLLKIVNNTFIDLPAPSNISSWWNFGSLLALCLTIQIITGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFIHVGRGIYYGSYMMVETWNIGVVLLFSVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTELVQWIWGGFSVDKATLTRFFAFHFILPFIVTALAGIHILFLHETGSNNPSGLNSDSDKIPFHPYYLLKDILGIMFFLLMFLTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALILSILILILFPILHTAKQRSMTFRPISQCLFWLLTADLLTLTWIGGQPVEHPYIIIGQLASITYFSIILILLPIAGLMENYFL---KWD-------MH--------FINILCLIAPILVAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPIRPTSSSNTLFILAPILALTLALSLWIPLPMPKSLLNLNLGILFLLAVSSLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILISIILFSGSFNMLSLITSQEFIWLIIPSWPMTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIILMNSLTTILFLGPFYDPQNPELFSVFLVPKILALTVLFLWIRASYPRFRYDQLMHLLWKNFLPITLAMCMWHVSMPFSLCSF-P-PLT--MNP-LTLSIIIFMILAGTMIVVFSSHWLLTWIGFEMNMLAMIPLLMYTKNPR-STEAAVKYFMMQASASMILLFAIIMNFSLSNQW--TVMNMLNYFPSTLLTISMLMKLGMAPFHFWVPEVTQGIPLKMGLVLLTWQKLAPMFILYQSIQTSNNQLIMIS-SLLSIFIGGWGGLNQLQLRKILAYSSIAHMGWMLMIMKYNPTLSLFNLSIYIIITLTMIILLTPYNITSTSQL---SQMWNTNFTISSIVLLTLMSLGGLPPLSGFAPKWLIIQEMTKNNNIILPTIMAIMALLNLMFYMRIIYASSMTLFPSTSQSKMKW-MHKNQKPLMFS-------PSLISLSILFLPLTPMYIILS---MN-ILVTMFINLTLSIILVILAFWLPQLNLYSEKTSPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWASQNFNLPTTIVLAIILIILLASSLAYEWFNKG--LEWKE-MQFVTVNTILAFSMATVGLLMYRSHLMSSLLCLEGMMLSIFILMCISMLTLNNSMAMTFPLILLVFAACEAAVGLSLLVMVSNTYGVDYVQNLNLLQCMLKILIPTFMLLPLTWLSPGKFIWLNTTLYSILISAISL-TFIYQHDTLSLNFS-PTFFTDNLSSPLLTLTTWLLPLMLMASQNHMNNESLFNKKLYISLMVSLQAILIMTFSATEMIMFYILFEATLIPTLIIITRWGNQSARLNAGTYFLFYTLIGSLPLLVALTYLQFSLGSLNFLLLQIWPKICIPNYW-----SSSLLWLACMLAFMVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRIILIINQ-PTELIIYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFMGATALMLAHGLTSSLLFCLANTNYERIHSRNLILARGIQSILPLMMLCWLLGGLTNLALPPSINLLGELMILTSIFSWSNMSIIILGVNILITALYTLYMLITTQRGSTTSYMKTISPSFTREHTLMFLHILPIILLSLKPSVILGTTF------MNIIFLS-FTLTLIILILPLTLP---TK-LSNL-FNLPHYIKLT-VANAFFMSMIPMIFFILSNQESMTIYWNWITIHSLNLSISLKLDYFSLLFMPVALYVTWSILEFSMWYMHSDPNINKFFKFLLMFLITMLILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFILAMTWYLIYLNTWELQQIFTLSYN--NNIPLLGLLLAAMGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFNLILQNNMMIKTMILCTGALTTLYAALCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLLKIMPLTSSSLIIGSLALTGTPFLTGFYSKDLIIETSNTSYTNAWALLLTLIATS-LTAVYSTRIIFFSLLGQPRFNSSNTINENNPLLMNPIKRLLLGSIFAGFMLSSSITPVTVPQMTMPIYLKLSALAITIMGFILAMELNSMTYNLK--LPSSSLKFSFSNMLGYFSTITHRLPTFINLHIYQKFSFTRTDLTILEMSMPNLISLTQTKMAS--MISNQKGMLKFYSLT---IIISV--IMALTLSLF---------------- +>Mustela_sibirica_Siberian_weasel +----MNENLFSSFTTPT-MMGLPIVILITMFPGIMFPSPN-RLINNRLISIQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSLNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISTVTAIVTFSILVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-VTLFFMFQLKVSKYNFPE-NPEPK-LVAASKP-TTP-W-EKKWTKIYFP-HS-LPLQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMLGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGSINFITTIINMKPPAMSQYQTPLFIWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMSGFVHWFPLFTGYTLNDVWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVLTVELTSTNIEWLHGCPPPYHTFEEPTYVLS-K--------MAYPFQMGLQDAASPIMEELLHFHDHTLMIVFLISSLVLYIISVMLTTKLTHTSTMDAQAVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTVMATRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLTTSGLVMWFHYNSLFLLTLGTTANVLTMYQWWRDVIREGTFQGHHTPTVQKGLRYGMILFITSEIFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFVTISLGLYFTVLQASEYYEAPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLSYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKIHPLTKIINNSFVDLPAPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFLHVGRGLYYGSYMFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAIHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALLLILMLMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFMILLVLMPIISIIENNML---KW--------MF--------MINIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSITMFVMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHTPYLPELYSINFTMKTLLLTTSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASI-P-PQT--MKP-PILTIIMFTIISGTIMVLMSSHWLTIWIGFEMNMLAIIPILMKKFSPR-AIEAATKYFLTQATASMLLMLGIIVNLLLTGQW--TALNILNPIVSNMMTVALSMKLGLSPFHFWVPEVTQGIPLMSGMILLTWQKIAPLSVLYQMAPSMNSHLLMTM-AFMSVLIGGWGGLNQTQLRKILAYSSIAHMGWMIAVTTYNPTLMLLNLTIYIMMTLGTFMLFTFSSSTTTLSL---SLTWNKFPMITSLILIIMLSLGGLPPLSGFMPKWMIIHELTKNNMITAAMFMTITALLNLYFYMRLTYATALTLFPSTNNMKMKW-QFESTKNMTLL-------PPLIVMSTMLLPLTPTMSTLF---MN-MMLTMLINVSLASLLILIAFWLPQLNVYTEKAGPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSINLKTTLTMALALISLLAASLAYEWTEEG--LEWSE-MSVVYINIFLAFTLSFMGLLIYRSHLMSSLLCLEGMMLSLFVMMTVTILANHYTLASMTPIILLVFAACEAALGLSLLVMISSTYGTDYVQNLNLLQCMLKIIIPTMMLIPLTWLSKPNMIWINTTAHSMLISLISL-MYLNQLTDNSLNFS-LLFFADSLSTPLLVLTTWLLPLMLMASQHHLSKETLTRKKLYITMLVMLQLFLIMTFTATELIMFYILFEATLMPTLVIITRWGNQTERLSAGLYFLFYTLVGSLPLLIALLWLQNNLGTLNLLIMQYWAQPLP-NSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRVTMLLNP-LTSYMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAVLIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLVGELFVVMASFSWSNITIALMGVNIIITALYSLYMLITTQRGKCTHHIKNIKPSFTRENSLMALHLLPLLLLSLNPKIILGYIY---MKVINLLTSS-VLVTLLMLTFPIMMT---NTTMYAN-KSYPQYVKTT-TSYAFMISLIPTMMFLHLGQDTMISNWHWITIQTMKLSLSFKLDYFSMVFMPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFILAMAWFLTNLNTWDLQQIFMTSNE-NLTIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEYNKTIQTITLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSCTNAWALLLTLVATS-MTAAYSTRIMFFALLGQPRFNPIITINEDNPLLINSIKRLLFGSIFAGFLISHNLTPTTTPQMTMPHYLKMMALAVTILGFILALELNLTMQSLK--FKYPTNLFKFSNMLGYFPTIIHRLMPKTNLLMSQKSASTLLDMIWLEKILPKSISHFQMKSSM--TISSQKGLIKLYFMS---FVLTL--ALSLLTL----------NFHE---- +>Mus_musculus_musculus_eastern_European_house_mouse +----MNENLFASFITPT-MMGFPIVVAIIMFPSILFPSSK-RLINNRLHSFQHWLIKLIIKQMMLIHTPKGRTWTLMIVSLIMFIGSTNLLGLLPHTFTPTTQLSMNLSMAIPLWAGAVITGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLMN-ISPPTATITFIILLLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIMSSM-ITLFILFQLKVSSQTFPL-APSPK-SLTTMKV-KTP-W-ELKWTKIYLP-HS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGFTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLIMIFMIWEAFASKREVMSVSYASTNLEWLHGCPPPYHTFEEPTYVKV-K--------MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVASNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI----------MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSITLLTLGLLTNILTMYQWWRDVIREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGISPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITIMLGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNMRKTHPLFKIINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGLYYGSYTFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILIMFLILMTLVLFFPDMLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALMPFLHTSKQRSLMFRPITQILYWILVANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIEDKML---KLYP------MF--------FINILTLLVPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPTLSLTLALSLWVPLPMPHPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLMSGSYSLQTLITTQEHMWLLLPAWPMAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTTIIFLGPLYYINLPELYSTNFMMEALLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIFTAGM-P-PYM--MNP-ITLAIIYFTIFLGPMITMSSTNLMLMWVGLEFSLLAIIPMLINKKNPR-STEAATKYFVTQATASMIILLAIVLNYKQLGTW--MFQQQTNSLILNMTLMALSMKLGLAPFHFWLPEVTQGIPLHMGLILLTWQKIAPLSILIQIYPLLNSTIILML-AITSIFMGAWGGLNQTQMRKIMAYSSIAHMGWMLAILPYNPSLTLLNLMIYIILTVPMFMALMLNSSMTINSI---SLLWNKTPAMLTMISLMLLSLGGLPPLTGFLPKWIIITELMKNNCLIMATLMAMMALLNLFFYTRLIYSTSLTMFPTNNNSKMMT-HQTKTKPNPMF-------STLAIMSTMTLPLAPQLII-----MN-LYTVIFINILLSLALILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTIKTSTMMIMAFILVTILSLGLAYEWTQKG--LEWTE-MPSTFFNLTMAFSLSLLGTLMFRSHLMSTLLCLEGMMLSLFIMTSVTSLNSNSMSSMPIPITILVFAACEAAVGLALLVKVSNTYGTDYVQNLNLLQCMLKIILPSLMLLPLTWLSSPKKTWTNVTSYSFLISLTSL-TLLWQTDENYKNFS-NMFSSDPLSTPLIILTAWLLPLMLMASQNHLKKDNSVLQKLYISMLISLQILLIMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLSAGIYFLFYTLIGSIPLLIALILIQNHVGTLNLMILSFTTHTLD-ASW-----SNNLLWLACMMAFLIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGSYGMIRISIILDP-LTKYMAYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSFMGATMLMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMATWWLIASLANLALPPSINLMGELFITMSLFSWSNFTIILMGINIIITGMYSMYMIITTQRGKLTNHMINLQPSHTRELTLMTLHMIPLILLTTSPKLITGLTM------MNIFTTS-ILLIFVLLLSPILIS---MSNLIKY-INFPLYTTTS-IKFSFIISLLPLLMFFYNNMEYMITTWHWVTMNSMELKMSFKTDFFSILFTSVALFVTWSIMQFSSWYMHSDPNINRFIKYLTLFLITMLILTSANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMVWFSLNMNSWELQQIMFSNNN-DNLIPLMGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPLTTNNNLILTTMLCLGALTTLFAAICALTQNDIKKIIAFSTSSQLG--LMMVTLGMNQPHLAFLHICTHAFFKAMLFMCSGSIIHSLADEQDIRKMGNITKTMPFTSSCLVIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALLITLIATS-MTAMYSMRIIYFVTMTKPRFPPLISINENDPDLMNPIKRLAFGSIFAGFVISYNIPPTNIPILTMPWFLKTTALIISVLGFLIALELNNLTMKLS--MSKPNPYSSFSTLLGFFPSIIHRITPMKSLNLSLKTSLTLLDLIWLEKTIPKSTSTLHTNMTT--LTTNQKGLIKLYFMS---FLINI--ILIIILYSI---------NLE---- +>Ursus_maritimus_polar_bear +----MNENLFTSFITPT-MVGIPIVPLIIMFPSILFPSPS-RLIDNRLVSIQQWLVRLTSKQMLSIHSHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVATGFRYKTKASLAHFLPQGTPFPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLTLTS-ISTITAFITFTVLVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWSITILSMV-LTLFIALQLKVSKYKYPE-IPEPK-SLSSSKK-LVP-W-EEKWTKIYLP-LL-SPQR----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNNTWAKIHFMIMFIGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVAVVELTSTNIEWLHGCPPPYHTFEEPAYVTL-K--------MACPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISTMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPVEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEEWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMLLLLLGLTTNMLTMYQWWRDIIRESTFQGHHTPVVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPELGACWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGSRKHMLQALFITISLGVYFTLLQASEYYEASFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFLRQLHFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSFIDLPTPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVHYGWVIRYVHANGASMFFICLFMHVGRGLYYGSYLFSETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALLLTLALATLVLFSPDLLGDPDNYIPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILALIPLLHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFTILLVLMPIAGIIENNLL---KW--------MF--------MINIISLVVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADATKLFTKEPLRPLTSSTTMFIMAPILALTLALTMWVPLPMPYPLVNMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPTWPLAMMWFISTLAETNRAPFDLAEGESELVSGFNVEYAAGPFALFFLAEYTNIIMMNALTTILFFGAFHNPYMPELYTVNFTVKTLLLTASFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVTLPIITASI-P-PQM--MKP-PILIIITSTIILGTMIVLFSSHWLMIWIGFEMNMLAIIPILMKKFNPR-ATEASTKYFLTQATASMLLMLGIIINLLHSGHW--TISMIPNPIASTVITIALAMKLGLSPFHFWVPEVTQGVPLSSGMVLLTWQKIAPLSVLYQISPSINPNLLVAM-AATSVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAIMVYNPTLMILNLTIYIMMTLGTFMLFMYNLSTTTLSL---SHTWNKLPLIASLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIVMPMFMATTALLNLYFYMRLAYATALTMFPSANNTKMKW-QFESMKKMIFL-------PPLIVASTMLLPLTPMLSIMD---MN-LILALFTNMLLASLLVLIAFWLPQLNIYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDNLMTMLTMALLLISLLAVSLAYEWTEKG--LEWAE-MPVVYVNIFLAFIVSLVGLLIYRSHLMSSLLCLEGMMLSLFVMLTVTVLNNHFTLANMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIFPTMMLVPLTWASKPNMIWINTTAYSLLISLVSL-TYLNQLSDNSLNFS-LLFFTDSLSAPLLVLTTWLLPLMLMASQFHLSKETLTRKKLYITMLVLLQLFLIMTFSAMELILFYILFEATLVPTLVIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLHTQNNLGSLNFLLMQYWTQPLP-NSW-----SSMFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLGP-LTSFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSLLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLSLPPTINLIGELFVVVATFSWSNITITLMGTNIIITALYSLYMLITTQRGKCTNHVKSIKPSFTRENALMALHLLPLLLLSLNPKMILGPIY------MNLFTSS-IIMTLLMLTMPIILT---SASTHKN-KSYPQYVKTT-VSYAFMISTIPMVMFLYSGQEVIISNWHWMTIQTLKLTLSFKLDYFSVIFMPVALFVTWSIMEFSIWYMHTDLNINHFFKYLLMFLITMMILVTANNLLQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDVGFIMAMAWFLLNTNAWDFQQIFAIEHE-NLNIPLAGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKTIQTATLCLGAMTTLFTAACALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPLTTTALIIGVLALTGMPFLTGFYSKDLIIETANTSYTNAWALLTTLVATS-MTAAYSTRIVFFVLLGQPRFNPVIIINENNPLLINSIKRLLLGSIFAGYLIFHNITPTTIPQMTMPYYLKMMALAVTMLGFILALELNSTTQTLK--LDYPQNPFKFSIQLGYFPIIIHRLLPMMSLSMSQKMASMLLDMTWLENVLPKSISYFQMKSSI--TVSNQKGLIKLYFLS---FMITL--ILSFFVL----------NFHE---- +>Brachyphylla_cavernarum_Antillean_fruit-eating_bat +----MNENLFASFITPT-MMGLPIVILIIMFPTIMFPSTN-RLINNRLVAIQQWLIHLTSKQMLSIHNHKGQTWALMLMSLILFIGTTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRYKTKSSLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMS-ISATTALITFVILILLTILEFAVALIQAYVFTLLVSLYLHDNAMPQLDTSTWFITILSTI-ITLFIIMQLKISSHYYYE-APEAK-TTKITES-LTP-W-NTKWTKIYSP-LS-LPLQ----MFISRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDNQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGVGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVVITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFSGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNVTWAKIHFLVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMVWEAFAAKREVSIVELTTTNIEWLHGCPPPYHTFEEPTYVNP-K--------MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFMISSLVLYIISSMLTTRLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPFMTVKTMGHQWYWSYEYTDYSELCFDSYMIPTPDLNMGDLRLLEVDNRVVLPMETTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVTLEYFEKWSASMA----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLAMWFHFNSTTLLTLGLLTNTLTMYQWWRDIVREGTFQGHHTPVVQKGLRYGMILFIISEVFFFFGFFWAFYHSSLAPTPELGGYWPPAGITPLNPLDVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITICLGLYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIINSSFVDLPAPSSLSSWWNFGSLLAACLAVQILTGLFLAMHYTSDTATAFDSVAHICRDVNYGWTLRYLHANGASMFFICLYLHVGRGLYYGSYTYSETWNVGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFLLPFIVSALVMVHLLFLHETGSNNPTGIPSDPDMIPFHPYYTIKEHLGFLIMLTVLSALVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIVPMLHISKQRSMMFRPLSQCLFWLLVAVLLTLTWIGGQPVEYPYVIIGQVASVLYFLIFLVFMPLVSAVENYLL---KW--------MF--------LINLLTTIVPVLLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLHPLTSSITMFIIAPILALTLALTMWVPLPMPHPLINMNLSVLFLLAMSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSYSLSTLIITQEYIWLILPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTTILFLGTYNKAT-PELYSVNFAIKTLLLTMTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYITMPIIMASI-P-PQT--MNP-LVFSTIMSTIILGTIIVITSSHWLLVWIGFEMNMLAIIPMLMKNHHPR-STEAGVKYFLTQATASMLLMLAVIINLLYSGQW--TVTNMINPTALTILTLALCMKLGLAPFHFWVPEVTQGIPLSSGLLLLTWQKLAPLSILYIISPKINPELLLIM-SILSVMIGGWGGLNQTQLRKIMAYSSIAHMGWMTSILIYNPTMTLLNLVIYITMTLTMFMLLIMTSTTTTLSL---SHTWNKMPLITSIILTTLLSLGGLPPLTGFMPKWMIIQEMTKNDNLILPTMMAMMALLNLYFYMRLMYATSLTMFPTMNNNKIKW-YFEDIKQTTGP-------IPLIIASTMTLPLTPLIMTLY---MN-MIITLFTNMLLASLLVTIAFWLPQTNSYTEKTSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTDNLQTMLPMALMLILLLAISLAYEWSQEG--LEWSE-MSFTYMNMFLAFMISLLGLLMYRSHMMSSLICLEGMMLSLFVMMTVTILNSHLTLASMLPIILLVFAACEAALGLSLLVMVSTTYGMDYVQNLNLLQCMLKIIIPTIMLIPLTWVSPPKMIWINSTTHSLLISILWL-PLINQFADNTLNLS-LMFFSDSLSTPLLMLTMWLLPLMLIASQFHLTNETLSRKKLYITMLVSLQVFLIMTFTSTELIMFYILFEATLLPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALVHLQNSMGTLNLLLMQYWINPLS-TSW-----NTGLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITVLLDP-TTKFMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERVHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSMFNWSNLTIILLGLNIIITALYSLYMLIMTQRGKYTHHINNILPSYTRENTLMTMHLIPLLLLSINPMIILGTPY------MNLVSST-MLTSLAMLIMPVLMT---AFSTETR-PNYPHYVKTM-VSYSFLVSMIPMLLFIHSNQETMVSNWHWTTIQTLKLTLSFKLDFFSVLFMPVALFVTWSILEFSMWYMHSDPNINRFFKYLLMFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFLTYSNSWEFQQIFSLDSN-STLLPLMGLLLAATGKSAQFGLHPWLPSAMEGSTPVSALLHSSTMVVAGIFLLIRFYPLMENNPTAQTMALCLGAITTLFTAMCALTQNDIKKMVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLFKTMPFTSTAMTVGSLALTGIPFLTGFYSKDLIIEAANTSYMNAWALLMTLIATT-LTAVYSTRIIFSALLGQPRSPTLILINENNPLLVNAIKRLLMGSIFAGFLISMNIPPMTIPPMTMPLYLKLMALAVTLTGFALALELNLMTLNLK--FKAPSNVFKFSNLLGYFPTIMHRLPPMANLTMSQKLASHLLDLTWLETILPKTISLIQLKSSI--LVSNQKGLIKLYFMS---FLITF--LLTLLLF----------IPHA---- +>Dremomys_rufigenis_Asian_red-cheeked_squirrel +----MNENLFASFITPT-LMGLPIVILIILFPNILFPSPN-RLINNRLVSFQQWLIQLVLKQMMMMHNLKGRTWSLMLISLIMFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRHKTKASLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTS-ISPPAAMITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITITSMF-FALFILFQTKISKHPYPS-NPSLK-NSTPTQH-KTP-W-EKKWTKIYLP-LS-LPLH----MFINHWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIY-VIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPWMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLTAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYAGKKEPFGYMGMVWAMMSIGFLGFIVWTHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKIHFTVMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTAWNTVSSMGSFISLTAVMIMIFMIWEAFASKREVLVVEHTTTNLEWLHGCPPPYHTFEEPTYVKA----------MAYPFELGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINDPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLKPGELRLLEVDNRVVLPMELPVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATLTSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFENWSSSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLIMWFHFNSSLLLTLGMFTNTLTMYQWWRDIVREGTFQGHHTPIVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPELGSCWPPVGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQALGITIALGLYFTLLQASEYLETSFTISDGIYGSTFFMATGFHGLHVIIGSTFLLVCLLRQLNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLIKIINHSFIDLPTPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGLYYGSYLYFETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPSGLISDSDKIPFHPYYTIKDILGLLALALIFMMLVLFSPDLLGDPNNYTPANPLNTPPHIKPEWYFLFAYAILQSIPNKLGGVLALVLSILILMLFPILHMSKQRSMMFRPLSQCLFWILVADLFTLTWIGGQPVEHPFITIGQLASVLYFSIILLMLPAASLVENKLL---KW--------MF--------MINLLLLIVPILLAMAFLTLVERKMLGYMQLRKGPNVVGPYGLLQPFADAMKLFIKEPLKPLTSSIALFIIAPSLALTLAFTMWIPLPMPQPLINMNMGILFILATSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSALITTQQSIWLLLPTWPLAMMWFISTLAETNRAPFDLAEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAFLNPTTPETFTFSFILKTLILTSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPISIACI-P-PQT--MNP-ITSLAIYLTLFSGTLITLLSSHWLLAWVGLEMSMLAMIPILMKKANPR-STEAASKYFLIQATASMMLMMSAIMNFMKTGQW--LLTNPLAPIPSLMLTIALAMKMGLAPFHLWVPEVTQGTPLMSGLILLTWQKIAPISIMTQVIQSINLPLLATM-AIMSIAMGGWGGLNQTQLWKILAYSSIAHMGWMMAIISFNPALTMFNLVIYIMLTINMFLLFYYYKNTTTLTL---SDTWNKFPLLVSITLVILMSLGGLPPLTGFSPKWMIIKELVSNNSIIMPTTMAMMALLNLYFYMRLIYSTALTLFPSANNNKMKW-QFESTKLIPLI-------PAIMTVSTLFLPLTPILSTLN---MN-LMISLFTNSFIALLLISVAFWLPQLNIYVEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLKLMLTVALMLLLILTLGLAYEWIQKG--LEWVE-MPIIILNITMAYMISLLGMFIYRSHLMSSLLCLEGMMLSMFILTTLMVLNSHFSLSFMMPIVLLVFAACEAAVGLALLVMVSNTYGLDYVQNLNILQCMLKIILPTILLAPLTWFSKSSMIWINPSIHSLIISLLVL-FTLNQTNDNGLIFS-PTFFSDSLSSPLLILTAWLLPLMIMASQNHLSNEPLIRKKLYILMLISLQSFLIMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIYIQKSMGSLNFMISIYQTSNCP-TTW-----TSNILWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMIRISTLLHP-ITSTMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMLLARGLQSILPLMTMWWLLASLTNLALPPTINLIGELFIILASFSWSNITIILTGANMLITALYSLYMLITTQRGKFTYHLTNMNPSFTRENTLMFMHMFPLILLSMNPMIILGQLY------MNLFSSC-TMMSLIALMFPILLT---LTDLYKS-NKYPNYVKNT-IIYALVFCMPPALMFIYSDYELIISNWHWMTIQTFNLTMSFKLDYFSMLFMPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLMFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVLAMAWFLMNSNSWDFQQLFTI--N-PTLLPLVGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPFIETNKAMQSLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNDEQDIRKMGGLFKALPFTSSSLIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALVITLIATS-LTAVYSTRIIFFALMGQPRFSSLNAINENNPQLTNSIKRLLIGSIFAGYLLSNNIPPTNLPILTMPMYLKLMALLVTIAGFTIAMDLNQLTLNLK--IKLHSNLHNFSNMLGYFPLTMHRIYPYLNLTASQKTATTLLDLIWMEKAIPKLIANFQTSAST--MTSNHKGLIKLYFLS---FLLST--TLAVATTT---------YFHE---- +>Pongo_abelii_Sumatran_orangutan +----MNESLFTPFITPT-VLGLPAAVLVILFPPLLIPTSK-HLINNRLIIIQQWLIRLILKQMMTTHNAKGRTWSLMLTSLIIFIASTNLLGLLPYSFTPTTQLSMNLAMAIPLWASTVAMGLRFKAKITLTHLLPQGTPTPLIPMLIIIETVSLFIQPLALAVRLTANITAGHLLMHLIGSSALAMLA-INLPLTLITLTILTLLTILETAIALIQAYVFTLLVSLYLHDNSMPQLNTTTWPTIITPML-LALFLITQLKLLNSHLHP-PTPPK-FTKPKLH-AKP-W-GPKWTKVYLP-HS-LPPQY---MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASATVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKEEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNTKWSAAILWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFITMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSAGSFISLTAVMLMIFMIWEAFASKRKVPMVEQPSTSLEWLYGCPPPYHTFEEPVYMKP-E--------MAHAAQVGLQDATSPIMEELVIFHDHALMIIFLICFLVLYALFLTLTTKLTNTSISDAQEMETIWTILPAIILILIALPSLRILYLTDEINDPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPVEAPVRMMITSQDVLHSWTVPSLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPVFTL----------MAHQSHAYHMVKPSPWPLTGALSALLTTSGLTMWFHFHSTTLLLTGLLTNALTMYQWWRDVVRESTYQGHHTLPVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPQLGGHWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRTQMIQALLITILLGIYFTLLQASEYIEAPFTISDGIYGSTFFMATGFHGLHVIIGSTFLTVCLARQLLFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTSTRKTNPLMKLINHSLIDLPTPSNISAWWNFGSLLGACLIIQITTGLFLAMHYSPDASTAFSSIAHITRDVNYGWMIRHLHANGASMFFICLFLHIGRGLYYGSFTHLETWNIGIILLFTTMMTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWVWGGYSVNSPTLTRFFTLHFMLPFIITALTTLHLLFLHETGSNNPLGIPSHSDKITFHPYYTIKDILGLLLFLLALMTLTLLSPDLLSDPDNYTLANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVMALMLSILILTTIPALHMSKQQSMTFRPLSQFLYWLLIADLLILTWIGGQPVSYPFITISQVASTLYFTTILLLMPASSLIENHML---KWT-------MP--------MINLLLLIMSILIAMAFLMLTERKILGHTQLRKGPNIVGPYGLLQPFADALKLFTKEPLKPSTSTITLYIISPALALTIALLLWTPLPMPIPLINLNLGLLFILAASSLTVYSILWSGWASNSNYALIGALRAVAQTISYEITLALILLSVLLMSGSFNLSALITTQEHSWLLLPSWPLALMWFISTLAETNRAPFDLTEGESELVSGFNTEYAAGPFALFFMAEYTNIILMNALTTMIFLGTTFNIHSPELYTTLFTIKTLLLTSLFLWIRSTYPRFRYDQLMHLLWKNFLPLTLALLMWHISVPIATSGI-P-PQT--MNP-LAQPIIYPTIFTGTLITALSSHWFFAWLGLEMNMLAFIPVLTKKTSPR-STEAAIKYFLTQATASMILLMAILYNNMLSGQW--TTTNTTNPYSSLMIVTALAMKLGMAPFHFWVPEVTQGVPLTSGLLLLTWQKLAPISIMYQMSSSVDTNILLTL-SILSILVGGWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPDITILNLIIYIILTTTAFLILDLNSSVTILML---TRTWNKLTWLMPLIPSTLLSLGGLPPLTGFLPKWAIIEEFAKNGNLITPTIMAIITLLNLYFYVRLIYATSITLLPMSNNAKMKW-QFENTKPTPLL-------PTLTILTTLLLPISPLILSIS---MN-FVLALTVNTLLALLLMTITFWLPQLYPYMEKSDPYECGFDPAYPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMTTSSLMLIIILALGLTYEWSQKG--LDWAE-MPLIYMNITLAFTMSLLGMLVYRSHLMSSLLCLEGMMLSLFIMITLMTLNTHSLLANIMPITMLVFAACEAAVGLALLASISNTYGLDYVNNLNLLQCMLKLIIPTIMLLPLTWLSKTHMIWINTTTHSLIISSIPL-LFLNQTNSNLYSYS-LLFSSDPLSTPLLMLTTWLLPLMIMASQHHLSNEPPSRKKLYLTMLISLQISLIMTFTATELIMFYILFETTLIPTLVIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIHTYNTLGSLNIVLLTLTARELT-DSW-----SNSLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIPILNP-LTKHMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVVAAILIQTPWSFTGATTLMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMALWWLLASLTNLALPPTINLLGELSVLMAMFSWSNITILLTGLNMLITTLYSLYMFTTTQRGTPTHHTNNMKPSFTRENTLMLMHLSPILLLSLNPSIIAGFAY--------MFTTM-TALTLTSLIPPITAT---LINPNKK-NSYPHYVKTA-IASAFTISLIPTTMFICLGQETIVTNWCWTTTQTLQLSLSFKLDYFSMTFLPVALLITWSIMEFSLWYMASDPNINQFLKFLLIFLITMIILVTANNLLQLFIGWEGVGIMSFLLISWWYARTDANTAAIQAILYNRIGDIGFILALAWFLLHSNSWELQQVFLLNNN-PNLLPLLGLLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLTENSPHIQTLTLCLGAITTLFAAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLALLHICTHAFFKALLFMCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTISSLALAGMPFLSGFYSKDLIIETANMSYTNTWALSITLIATS-LTGAYSTRMILHTLTSKPHFPTPISINENNPTLLKPIKRLMLGSLFAGFLITNNIPPMSLPQVTTPPYLKLAALAATLLGLLVALDLNYLANKLK--TKTPPPTFYFSIMLGFYPSIIHRMIPHLSLLMSQNLSLLLLDLTWLKKLMPKTISQHQTSASI--TISTQKGLIKLYFLS---FLIPL--LLILLMIS----------------- +>Pongo_pygmaeus_Bornean_orangutan +----MNEDLFTPFTTPT-VLGLPAAILVILFPPLLVPTSK-HFINNRLITTQQWLIRLTLKQMMITHNTKGRTWSLMLTSLIIFIASTNLLGLFPYSFTPTTQLSMNLAMAIPLWASTVAMGLRFKAKISLAHLLPQGTPTPLIPMLIIIETISLFIQPLALAVRLTANITAGHLLMHLIGSATLTMLT-INLPLTLITLTILTLLTILEIAVALIQAYVFTLLVSLYLHDNSMPQLNTTTWLTVITPTL-LALFLITQLKLLNSHLHP-PTPPK-FTKTKPH-AKP-W-ELKWTKIYSP-HS-LPPQS---MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLLPSFLLLLASATVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNTKWSAAILWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLNQTYAKIHFITMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSAGSFISLTAVMLMIFMIWEAFASKRKVPMIEQPSTSLEWLYGCPPPYHTFEEPVYMKP----------MAHAAQVGLQDATSPIMEELVIFHDHALMIIFLICFLVLYALFLTLTTKLTNTNISDAQEMETIWTILPAIILILIALPSLRILYLTDEINDPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPVEAPVRMMITSQDVLHSWTVPSLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPVFAL----------MVHQSHAYHMLKPSPWPLTGALSALLMTSGLAMWFHFHSTTLLLTGMLTNALTMYQWWRDVVRESTYQGHHTLPVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPQLGGHWPPTGITPLNPLEVPLLNTAVLLASGVSITWAHHSLMENNRTQMIQALLITILLGIYFTLLQASEYIEAPFTISDGIYGSTFFMTTGFHGLHVIIGSTFLTVCLSCQLLFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTPMRKTNPLMKLINHSLIDLPTPSNISAWWNFGSLLGACLIIQTITGLFLAMHYSPDATTAFSSIAHITRDVNYGWMIRHLHANGASMLFICLFLHIGRGLYYGSFTHLETWNIGIILLFMTMMTAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTDLVQWVWGGYSVNSPTLTRFFTLHFMLPFIITALTTLHLLFLHETGSNNPLGIPSHSDKITFHPYYTIKDILGLLLFLLALMTLTLLSPDLLSDPDNYTLANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVMALMLSILILTTIPALHTSKQQSMTFRPLSQFLYWLLITDLLVLTWIGGQPVSYPFITIGQVASVLYFTTILLLMPTSSLIENYML---KWT-------MP--------VINLLLLTMSILIAMAFLMLTERKILGYTQLRKGPNIVGPCGLLQPFADALKLFTKEPLKPSTSTTILYIVSPALALTIALLLWTPLPMPNPLINLNLGLLFILATSSLTVYSILWSGWASNSNYALIGTLRAVAQTISYEITLALILLSVLLMSGSFNLSTLITPQENSWLLLPSWPLALMWFISTLAETNRAPFDLTEGESELVSGFNTEYAAGPFALFFMAEYTNIILMNALTAMIFLGTTFNIHSPELHTTLFTIKTLLLTSLFLWIRQTYPRFRYDQLMHLLWKNFLPLTLALLMWHISMPITTSGI-P-PQT--MNP-LAQPIIYLTVFTGTLITALSSHWFFAWLGLEMNMLAFIPVLTKKTSPR-STEAAIKYFLTQATASMIFLMAILHNNMFSGQW--TTANTTNPYSSLMIVTALAMKLGMAPFHFWVPEVTQGVPLTSGLLLLTWQKLAPISIMYQMYPSVDTNILLTL-SILSILVGSWGGLNQTQLHKILAYSSITHMGWMVAVLPYNPNITILNLIIYITLTTTTFLILDLNSSTTILLL---SRTWNKLTWLMPLISSTLLSLGGLPPLTGFLPKWAIIEEFAKNDNLIAPTIMAIISLLNLYFYARLIYITSITLLPMSNNVKMKW-QFENTKPAPLL-------PTLTILTALLLPISPLILSIP---MN-FVLALTINTLLALLLMILTFWLPQLNPYMEKSDPYECGFDPAYPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMTTSSLMLIIILALGLTYEWSQKG--LDWTE-MPLIYMNITLAFTMSLLGMLVYRSHLMSSLLCLEGMMLSLFIMITLMTLNTHSLLANIMPITMLVFAACEAAVGLALLASISNTYGLDYVNNLNLLQCMLKLIIPTVMLLPLTWLSKTHMIWINTTTHSLIISFIPL-LFLNQTNSNLSSYS-LLFSSDPLSTPLLMLTTWLLPLMIMASQHHLSNEPPSRKKLYLSMLISLQISLIMTFTATELIMFYILFETTLIPTLIIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALTHTHNTLGSLNIMLLTLTARELT-DSW-----SNSLMWLAYTMAFMMKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTIILDP-LTKHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVVAAILIQTPWSFTGATTLMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMALWWLLASLTNLALPPTINLLGELSVLMAMFSWSNITILLTGLNMLITALYSLYMFITTQRGTPSHHINNMKPSSTRENTLMLMHLFPILLLSLNPSIIAGLTY------MAMFTTM-TALTLTSLIPPITAT---LINPNKK-NSYPHYVKTA-IASAFTISLIPTTMFICLGQETIITNWCWTTTQTLQLSLSFKLDYFSMTFLPVALFVTWSIMEFSLWYMASDPNINQFFKYLLIFLITMIILITANNLLQLFIGWEGVGIMSFLLISWWYARTDANTAAIQAILYNRIGDIGFILTLAWFLLHSNSWELQQVFLLNNN-PNLLPLLGLLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNPPIQTLALCLGAITTLFAAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKALLFMCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTISSLALAGMPFLSGFYSKDLIIETASMSYTNAWALSITLIATS-LTSAYSTRMILHTLTGKPLLPTPISINENNPTLLNPIKRLMTGSLFTGFLITSNIPPTSLPQTTTPLYLKLAALTATLLGLLVALDLNYLANKLK--VKTPPPAFYFSTMLGFYPNIIHRMIPHLSLLMSQNLSLLLLDLTWLEKLMPKAISQHQTSAST--TISTQKGMIKLYFLS---FLIPL--LLTLLMIS----------------- +>Crocidura_shantungensis_ +----MNENLFASFATPT-MMGLPIVILIILFPSILFPTPN-RLITNRLTALQQWFIQLVSKQMMMIHNQKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRYKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLLS-ISPVTALITFIILMMLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISML-LTLFISFQLKISKFMYPN-TPEPK-SLKTLQQ-NTP-W-ETKWTKIYSP-LS-LPQQ----MFMTRWLFSTNHKDIGTLYMVFGAWAGMAGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFIMIFFMVMPVMMGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGSINFITTIINMKTPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIAGFVHWFPLFTGYSLSSTWAKIHFAIMFIGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVIIMVFMIWEAFASKREVCSVELTSTNIEWMYGCPPPYHTFEEPVYVNA-K--------MAYPFQMGLQDATSPIMEELMNFHDHALMIVFLISSLVLYVISAMLTTKLTHTSTMDAQAVETIWTILPAIILIMIALPSLRILYMMDEINNPTLTIKTVGHQWYWSYEYTDYDELNFDSYMIPTSELKPGDLRLLEVDNRAVLPMEMTIRVLVTSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICGSNHTFMPIVLELVPLKTFEKWSSSMI----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSFNLIMMGLLGNTLTMYQWWRDVVREGTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHELGGYWPPAGIKPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQALLITIALGVYFTLLQAAEYYEAPFTISDGIYGSTFFMSTGFHGFHVIVGSTFLMICLLRQLNFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLMKIVNSSFIDLPAPSNISSWWNFGSLLGICLIAQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMYLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIVAALAGVHLLFLHETGSNNPSGLNSDTDKIPFHPYYTIKDILGALIMISTLSSLVLFSPDMLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILMIIPLLHTAKQRSMMFRPMSQCMFWILVADLFTLTWIGGQPVEYPFVVIGQLASVFYFLIILFIMPVTSMIENQLL---KW--------MF--------MINLLILIVPVLLAVAFLTLVERKILGYMQMRKGPNIVGPYGLLQPIADAVKLFIKEPLRPLTSSLSMFIAAPILALTLALTMWLPLPMPYSLINMNLGILFLLAVSSLSVYSILWSGWSSNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSYSLGNLIITQEHAWLLFASWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNTLTTILFLGAFHNPHWPELYSTNLMAKAILLTSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYVAFPIFSSSI-P-PQL--MNP-MIFIILLTTVVLGTSIVVTSSHWFMTWLGFEMNMMAIVPVLMKKYSPR-SMEAATKYFLTQATASMILMLAIIINLMHSGQW--TITNMENYIASMLITIALTMKLGLAPFHFWVPEVTQGVPLLSGLILLTWQKIAPLSLFYQIYSSVNMNILLLM-SLLSIMIGGWGGLNQTQLRKIMAYSSIAHMGWMMMIMIYNPNLSLLNLLIYILMTSSMFMLLIFSSSTSTLSL---SLTWNKIPIITIMSLVTLLSLGGLPPLTGFMPKWMIIQELTKNNSVILPTLMAILALLNLFFYMRLTYSTALTMFPTMNNTKFMW-QFQNMNILLIM-------LPLVTISTLALPLTPMLILLN---MN-LFLALLTNILLASLLVTIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWASQTNSLNMMITMALALIFLLVMSLAYEWLHQG--LEWTE-MSLVYMNTALAFSISMLGLLMYRAHLMSSLLCLEGMMLSLFTLGAMTILISHFTLANMLPIILLVFAACEAAVGLSLLIMVSNTYGADFVQNLNLLQCMLKLIIPSIMMIPLTWMS-KKNIWINTTLYSLLIALMTL-NLFYQPDNNALYFS-TTFYSDSLSTPLLALTTWLLPLMIIASQNHLMNETEVRKKTYITMLILLQIFLIMTFSATELILFYILFEATLVPTLILITRWGNQTERLNAGLYFLFYTLIGSLPLLVALVYIQNLLGTLNISITHMWTQNIL-NSW-----SNDFLWLACMMAFLVKMPLYGLHLWLPKAHVEAPVAGSMVLAAVLLKLGSYGMMRITIMLDP-LTEFMLFPFLTLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTVLPMMAAWWLLGSLTNLALPPTINLIGELFIILSSFSWSYITMLLMGLNVVITALYSLYMLIMTQRGKYSQHIQTINPSFTRENTLMALHMLPLLLLTFNPKLILGPTF------MNCFLTF-MLATLLVLLLPVALT---LFPTYKT-NKYPYYVKMT-ISYAFFISLIPTLLFINFGHEAIISNWHWMTLQTIKLSMSFKLDYFSLLFTPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFILAMAWFMMYSNSWELHQIFMTDTN-YNNLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNDLAKTLILTLGALTTLFAAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKAMPFTTTSLIIGSLALTGTPFLTGFYSKDLIIETANTSYTNAWALLITLIATT-LTAVYSTRILYYALLGQPRFNTLILINENNPLLINPIKRLLIGSIFAGFLISLNLPPMTTPQMTMPTYLKLTALLITLMGFILALELSLLTQNLK--LPPIKNYYNFSNMLGYFPITMHRLIPFTSLLMSQTLASMVLDLTWIEMSLPKLISNIQKIYST--AVSSQKGLIKSYFLS---FMFTL--LISLTLL----------SFHV---- +>Coelodonta_antiquitatis_woolly_rhinoceros +----MNENLFTSFTTPT-MMGLPIVILIIMFPSIMFPSPN-RLINNRLISMQQWLLRLTSKQMMSTHNSKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVFVGFRHKTKASLAHFLPQGTPVFLIPMLVIIETISLFIQPIALAVRLTANITAGHLLMHLIGGATLALMN-ISPTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIMSMI-ITLFIMFQLKISSHLHPP-NPELK-STKTLTY-TTP-W-ESKWTKIYSP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNMAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLALPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFMVWEAFASKREVSTVELTTSNLEWLHGCPPPYHTFEEPVYVNL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLVSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLVMWFHYNSALLLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGIYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTPDTTTAFSSVAHICRDVNYGWMIRYTHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGTILLLTLMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAITHLLFLHETGSNNPSGIPSNMDKIPFHPYYTIKDILGALLLIMALLILVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTFSILILLIIPSLHTSKQRSMMFRPLSQCMFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFTLILVLMPLAGIIENSLM---KW--------MF--------TINILLLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLKPSTSSTTMFIIAPILALTLALTMWIPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNAFTTILFLGAFHNPYMPELFTINFTVKTLLLTVSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIMMSSI-P-PQT--MNP-IIFTTILATAILGTMIVMTSSHWLMIWIGFEMNLLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMMAIIINLMYSGQW--TITKIFNPTASIIMTLALTMKLGLSPFHFWVPEVTQGISLTSGLILLTWQKLAPMSILYQIAPSINLDMLMTM-AILSILVGGWGGLNQTQLRKIMAYSSIAHMGWMTAILMYNPTMTVLNMLIYITMTLTTFMLFMLNSSTTTLSL---SHMWNKTPLVTSLILITMLSLGGLPPLSGFIPKWMIIQELTKNNSIILPTSMAIMALLNLYFYMRLTYSTSLTMFPSTNNMKMKW-QFENSNRMIFL-------PTLTIMSTLLLPLTPIMSILN---MN-LLLTLFINTLLASVLVLIAFWLPQLNVYSEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLKTMLTMALALISLLAASLAYEWTQKG--LEWTE-MSLVHINVFLAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFIMATMTVLNSHFTLASMMPIILLVFAACEAALGLSLLVMISNTYGTDYVQSLNLLQCMLKVITPTLMLIPLTWLSKSNMIWINTTTYSLLISLISL-SFLNQPSENSFNIS-PTFFSDPLSAPLLALTTWLLPLMIMASQHHLSKEPLARKKLYITMLITLQLFLIMTFTSMELISFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLIALIYIQNLTGSLNLLLIQYSTQTLP-DSW-----SNALLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTILNP-LTSYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERTHSRTMILARGLQTLLPLMAMWWLLASLTNLALPPTINLVGELFVVMSSFSWSNITIILMGTNIIITALYSLYMLITTQRGKYTYHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGTLY------MNMFSPL-MLTSLLMLTLPIITI---TTNTHKN-TTYSYFVKNT-ISCAFITSLIPTMMFIQSGQEMIISNWHWMTIQTLKLSLSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHSDPYITQFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDIGFIMSMAWFLCNMNSWDLQQIFTLNST-HTNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTMPFTATSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLVTLIATS-LTAAYSTRMIFFTLLGQPRFPTLVSINENNPFLMNSIKRLLIGSIFAGFLISNSIYPTTIPKMTMPYYLKLTALAVTILGFALALELSLATYNLK--PKHPSNLLKFSNLLGYFPTIFHRLPPSMGLLASQKSASLLLDSIWLETILPKSISQFQMISST--LVSNQKGLIKLYFLS---FLITL--ALSLLLL----------MPHE---- +>Bradypus_variegatus_Brown-throated_sloth +----MNENLFASFTTPT-MMNIPIALFIVALPTLLFPSPN-RLINNRIVSMQQWTTNLILKRMMITHGPKGQTWSLMLVSLIIFIGTTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVAVGFRHKTKASLAHLLPQGTPTPLIPMLVIIETISLLIQPVALAVRLTANITAGHMLMYLTGSATLTLMS-INPMAALTSFIILTLLTILEFAVALIQAYVFTLLINLYLRNNTMPQLDTSTWFIIIFSMY-ISLFTLMQPKLAKHNFPT-PPTPK-TFSTLAH-PTP-W-KTKWTKTCLP-LLPLPQ-----MFITRWLFSTNHKDIGTLYLLFGAWAGVVGTALSLLIRAELGQPGTLLGDDQIYNVIVTSHAFIMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLVTAILLLLSLPVLAAGITMLLTDRNLNTTFFDPTGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGDIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIMLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLNTTWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNMISSVGSFISLTAVVLLVFMIWEAFASKREAKPVELTTTNIEWLHGCPPPYHTFEEPTFVMN-LTQE-----MAHPLQLGFQDATSPIMEELLHFHDHTLMIMFLISTMVLYIISLMLSTKLTYTNTMDAQEVETVWTILPAIILILIALPSLRILYMMDEVNNPLLTIKTMGHQWYWSYEYTDYEDLNFDSYMIPTSDLEPGQFRLLEVDNRTVLPMEMPIRMLISSEDVIHSWAIPSLGIKTDAIPGRLNQTTLTSSRPGLYYGQCSEICGSNHSFMPIVLEFIPLKHFEDWSTLML----------MTHQMHAYHMVNPSPWPLTGALSALLMTSGLTMWFHSNSMTLLITGLTTSFLTMYQWWRDVIRESTFQGHHTTTVQKGLRYGMILFIISEIFFFLGFFWAFYHSSLAPTPEIGGSWPPVGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHTLQALLATIILGVYFTLLQTSEYFEVPFTISDGVFGSTFFMATGFHGLHVIIGSSFLTVCLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKPINHALIDLPTPSNISTWWNLGSLLGTCLIMQILTGLFLAMHYSSDTTTAFSSIAHICRDVNYGWTIRHLHANGASMFFMCLYLHIGRNLYYGSYSYLETWNTGVMLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSIEKATLTRFFTLHFIAPFIILALVLTHLLFLHETGSNNPLGISSNSDKIPFHPYHTIKDILGLLIMILTTLALTLLHPDLLGDPNNYTPANPLNTPPHIKPEWYFLFAYTILRSTPSKLGGVLTLICSILVLVIIPMTHTAKQRSLTFRPISQCLFWILTADLLILTWIGGQPMDPPFTTIGLLASILYFTTILILTPTAGLIENNLM---KW--------ML--------LTNILCLMVPILLAMAFLTLTERKILGHMQLRKGPNTVGPHGLLQPVADAVKLFTKEPLHPLTSSKLMFIIAPTLAFTLALSLWAPLPMPHPLINLNLSILFILAMSSLAVHSVLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLSALTITQEQMWLILPTWPLAMMWFISTLAETNRTPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTTTLFFGAFHNPLFPELHTINLTTKTLILTFLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCTWHMTMPISLAGI-P-PQT--MNP-MTLGIIMLTLFSGTMIAMLSSHWLPIWMGLEINMLTMIPILMLKRNPR-STEAATKYFLTQTTASILLMTAVVINAMLSGQW--TITKIFNQPASYIITISIAMKLGLAPFHFWVPEVTQGTPLTSGMTLLTWQKLAPISILYQITTSTNHILLLTM-AILSIMIGGWGGLNQTQLRKIMAYSSITHMGWTTAITMYNPTLMILNLTIYLLMTTSMFLLLTQQLSTTILTL---SRTWNTMPQLASMTTMVLLSTGGLPPLSGFLPKWMIIQEMTKNSLITTPMMMATLTLLNLYFYTRLIYSTSLTLFPCTNNTKTKW-QFKTTTLLPLT-------PALITLSTMIIPLSPMLSVLE---MN-LIITLLINSTLTSLLVTITFWLPQLNAYYEKSSPYEXGFDPTGSARLPFSMKFFLVAITFLLFDLEMALLLPLPWASQTNDLNSTLIMTLTLISLLTLGLAYEWSQKG--LEWTE-MPFIYINILLALTTALLGLLLFRSHMMSSLLCLEGLMLSLFIMSALTTLGTHHTLSITMPIILMVFAACETALGLALLVTISNIYGSDYVQNLNLLQCMLKLILPTTMLIPLVWLSKNNMIWINPTIHSLLISLISL-PMFYQTTGTSLNFS-SMFFTDPLSAPLLILTTWLLPLMIIASQPHLPKNTITQKKTYISMLILLQTTLVMTFTTTDLIMLYILFETTLIPTLIIMTRWGNQTERLNAGLYFLFYTLIGSLPLLVALTYIQNSLGSLNFLVIQYWSQPLP-TTW-----SSNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITTILDP-LTKSMAYPFMTLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVTVAILTQTPWSVTGASTLMIAHGLTSSLLFCLANTNYERTHSRTMILARGLQTLLPLMALWWLLASLANLALPPTINLMGELFTVMSTFSWSSTTIMLLGLNMTITALYSLSILIATQRGNPTNHIHMIKPTFTRENTLMLMHLLPLILLSTNPKLILGLPY------MNLSLTL-TLTTFLILITSIILP---TPKTHNT-LQYPNHMKTS-VVYALLTSTIPTIVFIWSGQEIIISNWHWMTIQTVKITLSFKLDHFALMFTPVALFVTWSIMEFSMWYMHSDPHINRFFKYLLLFLITMITLVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAVLYNRMGDVGFILAMAWFLLHSNSWELQQILMLNPN-ESTLPLLGLLLAAMGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPLLQNNNLVLTLTMCLGATTTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPNLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFMALPFTTTSLIIGSLALTGMPFLTGFYSKDLIIESTSTSYTNAWALLTTLIATS-LTAVYSTRIIHFVLLDQPRFQTLTPINENNPFILHPIKRLAMGSIFMGFLISNNMSPASTPHMTMPTHLKLSALAVTILGFLLAIELNKLTHNLQ--PKKPSHPYLFFNLLGFFTSIMHRTPPYLILTTSQNLATTLLDQTWLEKTAPKGLSQLNLLASI--NTSNQKGLIKLYFLS---FLTSL--LLVSLLM----------LYHSA--- +>Homo_sapiens_human +----MNENLFASFIAPT-ILGLPAAVLIILFPPLLIPTSK-YLINNRLITTQQWLIKLTSKQMMTMHNTKGRTWSLMLVSLIIFIATTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTVIMGFRSKIKNALAHFLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTANITAGHLLMHLIGSATLAMST-INLPSTLIIFTILILLTILEIAVALIQAYVFTLLVSLYLHDNTMPQLNTTVWPTMITPML-LTLFLITQLKMLNTNYHL-PPSPK-PMKMKNY-NKP-W-EPKWTKICSL-HS-LPPQS---MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGSFISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS----------MAHAAQVGLQDATSPIMEELITFHDHALMIIFLICFLVLYALFLTLTTKLTNTNISDAQEMETVWTILPAIILVLIALPSLRILYMTDEVNDPSLTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSWAVPTLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPVFTL----------MTHQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLMLGLLTNTLTMYQWWRDVTRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQLMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTPMRKTNPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQITTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYYGSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGYSVDSPTLTRFFTFHFILPFIIAALATLHLLFLHETGSNNPLGITSHSDKITFHPYYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTILRSVPNKLGGVLALLLSILILAMIPILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGGQPVSYPFTIIGQVASVLYFTTILILMPTISLIENKML---KWA-------MP--------MANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLSTLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFALFFMAEYTNIIMMNTLTTTIFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFRYDQLMHLLWKNFLPLTLALLMWYVSMPITISSI-P-PQT--MNP-LAQPVIYSTIFAGTLITALSSHWFFTWVGLEMNMLAFIPVLTKKMNPR-STEAAIKYFLTQATASMILLMAILFNNMLSGQW--TMTNTTNQYSSLMIMMAMAMKLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQISPSLNVSLLLTL-SILSIMAGSWGGLNQTQLRKILAYSSITHMGWMMAVLPYNPNMTILNLTIYIILTTTAFLLLNLNSSTTTLLL---SRTWNKLTWLTPLIPSTLLSLGGLPPLTGFLPKWAIIEEFTKNNSLIIPTIMATITLLNLYFYLRLIYSTSITLLPMSNNVKMKW-QFEHTKPTPFL-------PTLIALTTLLLPISPFMLMIL---MN-FALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMSPARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAYEWLQKG--LDWTE-MPLIYMNIMLAFTISLLGMLVYRSHLMSSLLCLEGMMLSLFIMATLMTLNTHSLLANIVPIAMLVFAACEAAVGLALLVSISNTYGLDYVHNLNLLQCMLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPL-LFFNQINNNLFSCS-PTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSSEPLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLTLTAQELS-NSW-----ANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNP-LTKHMAYPFLVLSLWGMIMTS--SICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFSS------MTMHTTM-TTLTLTSLIPPILTT---LVNPNKK-NSYPHYVKSI-VASTFIISLFPTTMFMCLDQEVIISNWHWATTQTTQLSLSFKLDYFSMMFIPVALFVTWSIMEFSLWYMNSDPNINQFFKYLLIFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYARADANTAAIQAILYNRIGDIGFILALAWFILHSNSWDPQQMALLNAN-PSLTPLLGLLLAAAGKSAQLGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLAENSPLIQTLTLCLGAITTLFAAVCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPLTSTSLTIGSLALAGMPFLTGFYSKDHIIETANMSYTNAWALSITLIATS-LTSAYSTRMILLTLTGQPRFPTLTNINENNPTLLNPIKRLAAGSLFAGFLITNNISPASPFQTTIPLYLKLTALAVTFLGLLTALDLNYLTNKLK--MKSPLCTFYFSNMLGFYPSITHRTIPYLGLLTSQNLPLLLLDLTWLEKLLPKTISQHQISTSI--ITSTQKGMIKLYFLS---FFFPL--ILTLLLIT----------------- +>Sorex_cylindricauda_Stripe-backed_shrew +----MNENLFASFATPT-MMGLPIVMLIILFPSIMFPAPN-RLINNRLVSLQQWLIQLTSKQMMAIHNQKGQTWTLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLMS-ISPITAFITFIILVMLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISMI-MTLFIVFQLKISKYLYPM-NPELK-SLKTLKH-NNP-W-ETKWTKIYSP-LS-LPQQ----MFVTRWLFSTNHKDIGTLYMVFGAWAGMAGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMLGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGSINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIIAGFVHWFPLFTGYTLSSTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVVVMVFMIWEAFASKREVTSVELTTTNIEWLYGCPPPYHTFEEPVYINS-K--------MAYPFQMGLQDATSPIMEELMNFHDHALMIVFLISTLVLYIISSMLTTKLTHTNTMDAQAVETIWTILPAIILILIALPSLRILYMMDEINNPTLTVKTVGHQWYWSYEYTDYDELNFDSYMIPTADLKPGDLRLLEVDNRAVLPMEMTVRVLITSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLATRPGLYYGQCSEICGSNHSFMPIVLELVPLKVFEKWSSSML----------MTHQTHAYHMVNPSPWPLMGALSALLLTSGLVMWFHFNSMILMSIGLLTNILTMYQWWRDVIREGTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTHELGGYWPPAGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQALFITIALGVYFTLLQAAEYYEAPFTISDGIYGSTFFMATGFHGFHVIVGSTFLMVCFLRQLKYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKTHPLMKIVNSSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMYLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAGVHLLFLHETGSNNPSGLSSDADKIPFHPYYTIKDILGVLLLILVLTSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAVMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASILYFLLILVIMPITSLLENNLL---KW--------MF--------LINLLTMIVPVLLAVAFLTLIERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFIKEPLRPLTSSVSMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAVSSLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILLMNGSFTLSTLIITQEYSWLLMSTWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTVLFLGAFHSIHLPELYSINFTIKALLLTISFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIFTSSI-P-PQT--MNP-MILTIILFTIMTGTMIVLMSSHWFMIWIGFEMNMLAIIPMLMKNYSPR-SMEASTKYFMTQATASMILMLAIIMNLLYSGQW--TITNITNPTASILMTMALVMKLGLSPFHFWVPEVTQGISLTSGMILLTWQKIAPLSVLYQIFSSINLDLLLSM-SLLSIMVGGWGGLNQTQLRKIMAYSSIAHMGWMTAVMIYDPTIMLLNLTVYITMTISTFMLFIYSSSTTTLSL---SHTWNKTPLIATLILTIMLSLGGLPPLTGFLPKWIIIQELTKNNSIILPTTMAILSLLNLFFYMRLTYSTSLTMFPTTNNNKMKW-QFESTKQIPLM-------APLITISTLTLPLAPLLITLN---MN-MLLALTINMFLASILVLIAFWLPQLNVYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTEQLNIMITMSLALITLSSNKSGLRMNPKGPWMNWM--MSLVHMNIALAFTVALLGLLMYRSHLMSSLLCLEGMMLTLFIMGTIMILNTHFTLASMLPIILLVFAACEAAVGLSLLVMVSNTYGVDYVQNLNLLQCMLKIIMPTVMLIPLTWLSNKKTMWINTTIYGMLICLTTL-PLFNQPNNNSIYFS-PTFFSDSLSAPLLALTTWLLPLMLMASQHHLMNETETRKKLYISMLILLQIFLIMTFSATELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALIYVQNLSGTLNFTITQLWASNIS-NSW-----SNDFLWLACMVAFLVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITVLLNP-ITDTMAYPFLLLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMATWWLLASLTNLALPPTINLIGELFVMLTSYSWSNLTMILMGTNVVITGLYSLYMLILTQRGKYSFHINTINPSFTRENALMALHTIPLLLLSLNPKLILGTMY------MNLYTSA-LLTSLSMLLLPVIMS---LLPIYKT-NNYPYYVKTI-ISYAFLTSLIPTLIFINMGHEEVISNWHWMTIQTVKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNMNRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFLFNSNSWELQQIFMLDLQ-HNNLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLLENNKTVQTLILCMGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLSDEQDIRKMGGLFKALPFTTTSLIVGSLALTGTPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-LTAVYSTRILYYSLLGQPRCSTLILINENNPLLINSIKRLLIGSIFAGFIISYNLTPMTIPQMTMPSYLKLTALIITLTGFALAYELNLMTQNLK--LSYPHDYHKFSNMLGYFPTVIHRLLPLSSLLVSQKFSSMLLDLTWMENILPKSISKFQASSSI--MVSNQKGLIKLYFLS---FLITL--TISILLF----------NYHV---- +>Arctodus_simus_giant_short-faced_bear +----MNENLFASFITPT-MMGVPIVVLIVVFPSILFPSPS-RLINNRLVSIQQWLVQLTSKQMLSIHNHKGQAWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTIVIGFRYKTKASLAHLLPQGTPFPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTN-ISVATALITFTVLVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITTLSMV-LALFIVFQLKILKYNYSE-TPGLK-SSLSLKK-TMP-W-EKKWTKIYLP-LL-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFMLNDTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYATWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVGTVELTTTNIEWLHGCPPPYHTFEEPTYITL-K--------MAYPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISTMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPLLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTQELKPGELRLLEVDNRVVLPMEVTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPVVLELVPLSYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMSLLLLGLTTNMLTMYQWWRDIIRESTFQGHHTPVVQKGLRYGMILFIVSEVFFFTGFFWAFYHSSLAPTPELGACWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRNHALQALLITISLGVYFTLLQASEYYEASFTISDGIYGSTFFVATGFHGLHVIIGSTFLIICFLRQLHFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLAKIINNSFIDLPTPSNISAWWNFGSLLGVCLVLQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYLFSETWNIGIILLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFTFHFILPFIILALAAVHLLLLHETGSNNPSGIPSNSDKIPFHPYYTIKDILGALFLILTLMTLVLFSPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILVLAIIPLLHTSKQRGMMFRPLSQCLFWLLTADLLTLTWIGGQPVEYPFIIIGQLASILYFTILLVLMPVAGIIENNFS---KW--------MF--------MINIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPVADAVKLFTKEPLRPLTSSVTMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNALTTILFFGAFHNPYMPELYTANFTMKTLLLTTSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYTTLPIITASI-P-PQT--MKP-PILIIIMSTIALGTMIVLFSSHWFMIWIGFEMNMLAIIPILMKKHNPR-AVEASTKYFLTQATASMLLMLGIIINLLYSGHW--TISTILNPIASTTITIALAMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKIAPLSILHQISPSINPNLLMAM-ATASVLMGGWGGLNQTQLRKILAYSSIAHMGWMAAIMIYNPTLMILNLMIYITMTLGTFMLFMHNLSTTTLSL---SHTWNKFPLITSLILALMLSLGGLPPLSGFIPKWMIIQELTKNDMIIMPMFMAITALLNLYFYMRLAYATALTMFPSANNMKMKW-QFEATKKVILL-------PPLIVASTMLLPLTPMLSTLD---MN-LILALFTNTLLASLLVLIAFWLPQLNIYAEKVSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWALQAKNPTTVLITALLLISLLAASLAYEWTEKG--LDWTE-MSMVYINIFLAFIVSLMGLLIYRSHLMSSLLCLEGMMLSLFVMLAVTVLNNHFTLASMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIILPTMMLMPLTWTSKPNMIWINTTTYSLLISLISL-TYLNQLSDNSLNFS-LLFFTDSLSAPLLVLTTWLLPLMLMASQFHLSKETLTRKKLYITMLILLQLFLIMTFSAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALLHTQNNLGSLNFLMMQYWTQPLP-NSW-----SSIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLSP-LTNSMAYPFMMLSLWGMIMTS--SICLRQADLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERTHSRIMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNTTIVLMGTNIIITALYSLYMLITTQRGKYTDHIKNIKPSFTRENALMALHLLPLLLLSLNPKMILGPVY------MNLFTSS-VITALLMLTMPIILT---STSVYKD-KSYPQYVKTT-ISYAFMVSTIPMMMFIFSGQETVISNWHWMTIQTLKLTLSFKLDYFSMIFMPVALFVTWSITEFSMWYMHADPNINRFFKYLLMFLITMMTLVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFIMAMAWFLLNTNAWDFQQIFMIGHK-DLNTPLVGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTIQTTTLCLGAMTTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKVLPFTSTALIVGTLALTGMPFLTGFYSKDLIIETANTSYINAWALLTTLAATS-MTAAYSTRIVFFALLGQPRFNPTVTINENNPLLINSIKRLLLGSILAGYLISHSIAPMNIPQMTMPYYLKMTALAVTTLGFILALELNLTAQGLK--FDYPLNPFKFSIQLGYFPTIIHRSVPMMSLSMSQKAASMLLDAIWLENVLPKSISYFQMKSST--TISNQKGLIKLYFLS---FMITL--LLSFLVL----------NFHE---- +>Ateles_belzebuth_white-bellied_spider_monkey +----MNQNLFASFNVPM-ILGIPLITLIIMFPTMLITPPN-KLLSNRLSSLQQLLIQLLLKQMMMVHSIKGRTWSLLLLALITFITLTNILGLTPYAFTPTTQLSMNMGMAIPLWMATVLMGLRFKTKESLAHFLPQGTPAPLIPMLIIIETISLFIQPIALAVRLTANITAGHLLMHLLGDTALTLSS-IYLSSSVITVIVIILLVTLELGVALIQAYVFTLLVSLYLHNNSMPQLDLSPWPVVILSMI-MTLFYIIQLKMLNFTFYI-TPLSK-LTKMQKH-KTT-W-ELKWTKIYLP-PS-MCQ-----MFMTRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRAELGQPGSLMEDDHVYNVIVTSHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDHTYAKIHFTVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIISSVGSFISLTAVILMIFMIWEAFSSKRKVLAIEQLFTNLEWLYGCPPPYHTFEEATYVKSLNEKG-----MAHPAQLGLQNATSPIMEELIAFHDHTLMIIFLISSLVLYIISMMLTTKLTHTSTMNAQEIEMIWTILPAIILIMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYVDLAFDSYIMPTYFLEPGEFRLLEVDNRTTLPMEADIRMLISSQDVLHSWAVPSLGVKADAIPGRLNQAMLASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWAS-------------MTHQTHAYHMVNPSPWPLTGALSAFLLTSGLIMWFHFYYSLLLIAGLLASTMTMFQWWRDVVRESTYQGHHTTPVQKGLRYGMILFIISEIFFFAGFFWAFYHSSLAPTPQTGGHWPPTGILPLNPMEVPLLNTAILLASGVTITWAHHSLMESNREESIQALAMTIALGIYFTCLQMSEYSEASFTISDGIYGSTFFMATGFHGLHVMIGTTFLITCFIRQQLYHFTTNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTTPRKTHPLAKIINNSLIDLPSPSNISAWWNFGSLLGICLIIQITTGLFLAMHYTPDTSTAFSSVAHITRDVNYGWMVRYLHANGASMFFICLFLHIGRGLYYGSFLSLKTWNIGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSNIVQWVWGGFSVDKATLTRFFTFHFILPFIIAALATIHLLFLHDTGSSNPSGMASDPDKITFHPYYTIKDILGLILLLLCLMSLTLFSPDLLTDPDNYTLANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILMIIPTLHLSKQQTMKFRPITQILFWALVADLLTLTWIGGQPVEYPFMAIGQTASIMYFLTIITLIPLSTLIENKLL---KW--------MF--------MVNLLLLIIPALIAMAFLTLMERKILGYMQFRKGPNIVGPYGVLQPIADAMKLFTKEPLLPTTSASTLYMTAPALALSIALLMWSPLPMPHPLINFNLGLLFMLATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLQSLITTQEHSWLLLPSWPMAMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFLAMPYNMASSELYTMNFMTKTLLLTTLFLWIRTAYPRFRYDQLMHLLWKKFLPLTLALCMWYISMPTLTSGI-P-PQT--MNP-LAHLIISLTIMMGTMITILSSHWFLIWMGLELNMLAIVPVLMKNSSPR-STEAATKYFLTQATASMILLMAIYLNNLFSGQW--TINSSLDQTLTTMTLIALTMKLGMAPFHFWLPEVTQGTPLIPTMIILTWQKLAPLSIMLQIFSSININILLTM-SILSIMIGSWGGLNQTQLRKILAYSSITYMGWMTAVLYHDPNITTLTLLIYIFLTISTLMTFYLNSNMTTLSL---SHTWNKITWMMPAIPLMMMSLGGLPPLTGFSPKFAIMQELTKNNNIIIPLTMAMLTLMNLYFYMRLTYAISMTMFPTSNSTKINW-QLKYMKSTPLL-------SPLMTSSTLLLPVTPLMLMV----MN-LLLTLMTNILLALLLITITFWLPQLNMYTEKFNPYECGFDPTTSARLPFSMKFFLIAITFLLFDLEIALLLPLPWATQTSNLMLTINMILALIVIMAAGLAYEWIQKG--LDWIE-MPFVYINITLAYTMSLLGLLIYRSHLMSSLLCLEGMMLSLFIMITLTTLNMHFMLMYMLPVILLVFAACEAAVGLALLILISNLYGLDYVQNLNLLQCMLKIIMPTIMLLPMIWLSKNHMMWINMMTCSLLISALTP-LLLYLPN-NPCNLS-LTFSSDPLTSPLLTLTAWLLPLMILATQQHLYNNPSMRKKLYISMLIFLQISLIMTFTATELILFYILFETTLIPTLIIITRWGYQPERINAGSYFLFYTLTGSLPLLITLLYHLSNLGSLNML-MMISTKEMM-FSW-----TNNIMWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGSYGMMRITPILGP-LTEKMSYPFLVLSLWGMAMTS--SICLRQTDLKSLIAYSSVSHMALVILAIMIQTPWSFTGAMILMISHGLTSSLLFCLANSNYERIHSRTMMFARGLQTLFPLLALWWLLANLANLALPPTINLMGELFTILAAFSWSNFTIMFTGFNMLITALYSLYMFTSTQRGPLTYSTSNVKPLFTRENMLMLMHMAPILLLTLNPKVIMGLAP--------MHSTM-TLMMLIPLLMPITIT---LIKSNKN-PLYPHYVKLA-IIYALTISIATMTMFIFTGQESMTSNWHWTTIQTIKLSLNFKLDFFSMMFTPVALFVTWSIVEFSTWYMSSDPKINQFLKYLLIFLITMLILITANNLFQLFIGWEGMGIMSFLLISWWHGRTDANTAALQAILYNRIGDIGFILAMAWFFLYSNSWDFQQMFILNPN-PNSFPLISLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRFHPLIEDNPLIQTLTLSLGAVTSLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTVGINQPHLAFLHICTHAFFKAMLFLSAGSIIHSLNNEQDIRKMGGLFKIMPFTASSLMIGSFALMGVPFLTGFYSKDLIIETANMSYTNAWALTITLLATS-LTATYSARIIFFALMGRPRFMSSATINENNPSLMNSINRLAVGSILAGFLISTCIPPTSYPQITMPYYLKLAALGVTTLGLLMAMELNYMTNNMK--LSTPVKPFYFSNMLGFYSITTHRSNPHSSLTASQNLISTLLDFFWLEKSMPKMTMQTQTSISM--TTSTQKGLIKLYFLS---FFIPP--TMLLLLTI----------------- +>Callicebus_lugens_ +----MNQNLFASFNIPM-MLGIPLATFIILFPTLLIIPSN-KLMSNRFTSLQQWLIQLTLKQLMLSHSTKGRTWSLMLLALITFIALNNLLGLTPYAFTPTTQLSMNIGMAIPLWAATVIMGFRFKTKSSLAHFLPQGTPIPLIPMLVIIETISLLIQPMALAVRLTANITAGHLLMHLLGDTALTLLS-LYFSSSIITIIVIILLITLELGVALIQAYVFTLLVSLYLHDNSMPQLNTSPWPMVILSMV-VALFYIIQLKMLNFSFYI-IPTSK-STKMQKH-STT-W-ELKWTKIYLP-HS-TFQ-----MFMNRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRAELGQPGSLMEDDHVYNVIVTSHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIVSSVGSFISLTAVILMIFMIWEAFSSKRKVMTIEQLSTNLEWLYGCPPPYHTFEEATYVKTLNEKG-----MAHPAQLGLQNAASPIMEELIAFHDHALMIIFLISSLVLYIISLMLTTKLTHTSTMNAQEIEMIWTILPAIILIMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYEDLAFDSYIMPTYFLEPGEFRLLEVDNRTTLPMEADIRMLISSQDVLHSWAVPSLGVKADAIPGRLNQAMVASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWASYLYIV--------MTHQAHAYHMVNPSPWPLTGALSAFLLTSGLIMWFHFYHSLLLTTGLLASAMTMFQWWRDVVREGTYQGHHTTPVQKGLRYGMILFIISEIFFFAGFFWAFYHSSLAPTPQTGGHWPPTGIFPLNPMEVPLLNTAVLLASGVTITWAHHSLMEADQEESTQALFMTIALGAYFTYLQMSEYSEASFTISDGIYGSTFFMATGFHGLHVIIGTTFLTTCYFRLQLDHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTIPRKTHPLAKIINNSFIDLPTPSNISYWWNFGSLLGICLITQIATGLFLAMHYTPDTSTAFSSVAHIMRDVNYGWMIRYLHANGASMFFICLFMHVGRGLYYGSFLFLKTWNVGIILLLTSMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFTFHFIMPFIIAALAAIHLLFLHDTGSNNPSGLMSNSDKIAFHPYYTIKDILGLVFLLLLLMSLTLFTPDLLTDPDNYTLANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALMLSILILAIIPMIHLSKQQSMMFRPISQSLFWTLTAILLTLTWIGGQPVEHPFITIGQTASIMYFLIIITLIPLSSLIENKLL---KL------------------MINLLLLIIPALIAMAFLTLTERKILGYMQFRKGPNIVGPYGTLQPIADAMKLFTKEPLLPTASTTTLYIIAPTLALSIALLLWTPLPMPLPLINFNLGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSFNLHSLITTQEHLWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFLAAPHMLTTPELYTMNFMTKTLMLTALFLWIRSAYPRFRYDQLMYLLWKKFLPLTLALCMWYISMPILMSGI-P-PQM--MNP-LAHLTISFTILTGTMITILSSHWFLIWMGLELNMLAIVPVLAKSTNPR-STEAATKYFLIQATASMLLLMTILMNNLFSGQW--TINPPMNQLLSTTMLIALVMKLGMAPLHFWLPEVTQGIPLIPAMIILTWQKLAPLSIVMQIFPSININTLMTI-SILSIMVGSWGGLNQTQLRKILAYSSITHMGWMMAVLHYNPNITILNLFIYLFLTISIFMTFYLNSNTTTLSM---SHTWNKFTWMMPIIPLLMLSLGGLPPLTGFSPKWAVMQEFTNNNSLAMPLAMAMLTLVNLYFYLRLTYSISMTMFPTSNNSKINW-QLKYMKPSPLL-------APLTTLSTFLLPITPLMLMN-----N-LTLALITNIFLALLLIIITFWIPQPNAYTEKHNPYECGFDPTTSAHLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNKLMMTTNMILALIIILILGLAYEWTQKG--LDWIE-MPFIYINTALAYSMSLLGLFIYRSHLMSSLLCLEGMMLSLFILTTLMTLNMHLTLMFMMPITLLVFAACEAAVGLALLVLISNLYGLDYVQNLNLLQCMLKIILPTIMLLPTVWLSNNCTMWINMMTWSLLISALAL-MPLYLPN-ILCYLS-LTFFSDPLTSPLLALTTWLLPLMILATQQHLYNNPLPRKKLYISMLILLQISLIMTFTATELILFYILFETTLIPTLIVITRWGYQPERLNAGSYFLFYTLAGSLPLLITLLYYLTNLGSLNLLTTLLTTKEMT-LSW-----TNSITWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGSYGMMRITPILNP-LTEKMNYPFIILSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVILAILIQTPWSFTGAIILMIAHGLTSSLLFCLANSNYERIHSRTMMFTRGLQTLFPLLALWWLMANLTNLALPPTINLMGELFTIMASFSWSNFTIMFTGLNMLITALYSLHMFISTQRGPLTYSTSNVKPLFTRENTLMLMHLGPILLLTLNPKVIMGLAP-------MMFSSI-ALMALVPLLVPIMIT---LTSPRSN-PLYPHYVKLA-IMYSLSISTLSTAMFIFTGQEFVISNWHWTTIQTIKLFLSFKLDFFSMVFTPVALLVTWSIVEFSMWYMSSDPNINQFLKYLLIFLITMLILITANNLFQLFIGWEGMGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFILAMAWFFLYTNSWDFQQMFILNST-PNSFPLISLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLIIRLHPLFENNPPMQTLMLTLGAITTLFTAICALTQNDMKKIIAFSTSSQLG--LMMVTVGLNQPFLAFLHICTHAFFKAMLFLSAGSIIHSLNNEQDIRKMGGLFNTLPFTASSLIIGSLALMGTPFLTGFYSKDLIIETANMSYTNTWAIMMTLVATS-LTAAYSIRIIFFTLTNHPRTMNLILINENNPLLMNSINRLAIGSIFAGFFISNCIPPTSYPQYTMPPYLKLATLGVSMLGLLLAMELSLMTNNMK--LYTPTKTYYFSNMLGFYSTTTHRLNPHSSLTMSQNFTSTLLDMLWLEKTMPKMVSMTQISIST--STSTPKGLIKLYFLS---FLIPP--TIALILTI----------------- +>Elephantulus_sp__VB001_elephant_shrew +----MNENLFASFITPT-LAGLPIVVLIIAFPSILFPNSN-RLINNRWVAIQQWLITVILKQMMMMHNIKGRTWSLMLVSLILFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPLWAGAVITGFRHKTKASLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLMS-ISTPTAMITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSAL-ITLFIIFQINLASFTNPQ-DPSIK-TSKTSLS-PST-W-ETKWTKIYLP-HS-SRLH----MFINRWLFSTNHKDIGTLYLIFGTWAGMVGTALSILIRAELGQPGALMGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDMTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWAPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGLVHWFPLFTGYTLNSTWAKIQFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTLWNTISSTGSFISMVAVILMVFIVWEAFASKREVEMVELTTTNIEWINGCPPPYHTFEEPTFIKS----------MAYPFELGFQDASSPIMEELIHFHDHTLMIVFLISSLVLYVITAMLTTKLTHTSTMDAQEIETIWTILPAAILILIALPSLRILYMMDEISNPAMTVKTMGHQWYWSYEYTDYTDLTFDSYMIPTNELSPGGLRLLEVDNRLVLPVDVPVRMLISSEDVLHSWAIPALGLKTDAIPGRLNQATLSSTRPGLFYGQCSEICGSNHSFMPIVLEIVPLKHFDNWSSTL-----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLVMWFHFNSLLLLSIGLLTNTLTMYQWWRDIVRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEIPLLNTAILLASGVTITWAHHSLMEGNRNHMIQALFITISLGLYFTLLQASEYYESSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKMINHSFVDLPAPSNISSWWNFGSLLGLCLMIQIMTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASLFFICLFIHVGRGIYYGSYLFTETWNIGVILLLITMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGLISDSDKIPFHPYYTIKDFLGVILVLLLLLSLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVMALVLSILILMLFPMLHTAKQRSLMFRPISQFLFWVLVADLLTLTWIGGQPVEHPYIIIGQLASILYFTLILALMPIAGLIENHML---KW--------MY--------IINILTLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAVKLFTKEPLYPMTSSMSLFIIAPILALTIALIMWTPIPMPTPLMNMNLGLLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVSLAMILLPVVIISGSFTLSSLITAQEHIWLLFPMWPLAMMWFISTLAETNRAPFDLTEGESELVSGYNVEYAAGPFALFFLAEYANIIMMNALTTLLFLCPQYNPMIPELFSANFTIKTLILTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMLYIAMPITLACI-P-PQQ--MNP-LTLSLILMTLTSGSMLAMFSSHWLTAWLGLEMNLFAIIPFIINPHNPR-SIEGATKYFLMQASASMLLMMAALINFMSSGQW--SIMNLTNPIASLLMLTALLMKLGMAPFHFWVPEVLQSTTLFTGMVLLTWQKLAPISILYQITPSINHNVLLGS-AILSIMIGGWGGLNQTLIRKIMAYSSIAHMGWMTAAIIYNPSLTLMNLLIYIILTLTLFLLFTLNHSTTLTLL---ASSWNKTPVLTVMILTTLMSTGGLPPFSGFIPKWLIIQEITKNNNMIVPLIMAFMALLNLYFYMRLAYSTALTMFPTSNNTKLNW-LYNSNPSSITL-------APLLVMSNLLLPMTPMLLLLE---MN-LVLTLTINLLISSVLVIVAFWLPQLNAYSEKATPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTINLKLMLFMALMLISILALGLAYEWMQKG--LEWTE-MSPIHLNMIMAFFISLTGLLLYRSHLMSSLLCLEGMMLSLFVLTTSLALNMNFTLLSIIPIILLVFAACEAAIGLSLLVTVSNTYGLDYVQNLNLLQCMLKIIMPTIMLLPLTWLSKPSLMWTHTTLYSFTISLVSF-SLLTFHSESFNTHS-TLFFSDALSTPLLILTTWLLPLTLMASQHHLTLESPNRKKTFTSMLILLQLFLIMTFASSEMIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLIILVSLQNTMGSLNFMILQYWTKPMD-PSW-----SSNLIWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITLILEP-ITTTMSYPFILLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVILAVMIQTPWSFMGATTLMIAHGLTSSVLFCLANSNYERVHSRTMILARGLQTIFPLMASWWIIASLANLALPPSINLIGELIIIVSSFSWSNLTIILLGLNMLITAMYSLYMLIMTQRGKTTHHIITMNPTSTRENALMALHLIPLVLLSINPVIILGNTY---MKVMNLSNTF-TLITLSSLLIPLLLS---TTSMYNK-HTYSTYVKIT-IQYAFITSTIPTIMFLFSNQESVISNWHWITIQSVKLSLSFKMDYFSLMFIPIALYVTWSIMEFSLWYMHSDPNINRFLKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAVLYNRIGDIGFVLSMAWLLLNYNSWELQQIISYS-N-YSMIPLLGLLLAAMGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPILQTNNIIQTLTLCLGAITTLFTALCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLYKSLPFTTSALVIGSLALTGMPFLTGFYSKDLIIETANMSHTNAWALLMTLLATS-MTAIYSTRIVFFVFLGQPRYMPMITSNENNPNLINPIKRLAIGSIFAGYILTSFIPPTSTPLLTMPPYMKMAAMVVTILGFILAMELNTLTTNLK--LNPPSPSHNFSNLLGYFPTTMHRLPTYESLNSSLNLALMTLDQIWLENILPKNLSTLHKITSI--NLSNQKGLIKLYFMS---FLVTM--ILSLLLIA----------------- +>Tarsius_lariang_Lariang_tarsier +----MNENLFASFITPT-MMGLPVVVLIIMFPTMLYPTSN-RLINNRLISLQQWLIQLVTKQMMMMHNNKGQTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRHKTKASLAHFLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLILSS-ISSIAASTTFIILILLTILEMAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTILSTT-LTLFILFQFKISKTMYPL-NPNLK-TIKMQMH-KTP-W-ELKWTKIYSP-LS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGFTLHPTWAKTHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFMVWEAFASKREVLAVELPNTNLEWLHGCPPPYHTFEEPTYVKA-Y--------MSYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINSPSLTIKTMGHQWYWSYEYTDYEDLNFDSYMVPTADLKPGELRLLEVDNRVVLPMETPIRMLISSEDVLHSWAIPSLGLKTDAIPGRLNQATLMSTRPGLYYGQCSEICGANHSFMPIVLELVPLKHFEDWLTSMI----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSSLLLTLGLITNTLTMYQWWRDIIREGTFQGHHTSIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGINPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKQMLQALLITIILGIYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNTRKTHPIMKIINHAFIDLPAPSNISAWWNFGSLLGICLGVQIITGLFLAMHYTSDTVTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFVVTALVMVHLLFLHETGSNNPSGITSDSDKIPFHPYFTIKDILGLAILILALMLLTLFTPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIIPLLHMSKQRSMMFRPLSQCLFWILVADLLTLTWIGGQPVEHPFIIIGQTASILYFTIILILMPLTNLMENKML---KW--------MF--------MINLLTLIIPVILAMAFLTLAERKVLGYMQLRKGPNIIGPYGLLQPFADAMKLFIKEPLQPLTSASLLYIIAPTLALALALIMWIPMPMPYPLLNMNLSVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTVSYEVTLAIILLAVLLMNGSFTLMSLILTQEYTWLIMPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTIFLGALHNTIMPQMYTINFMVKTLILTSLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISMPVLMCSI-P-PHQ--MKP-VIFSSIFLTLFSGTLITMLSSHWLLVWIGLEMSMLAITPLLIKKANPR-STEAATKYFLIQATASMILIMSVIINMSYSGQW--TILNKYNNLSSMMVLIALMMKLGLAPFHFWVPEVTQGVSLVSGLLLLTWQKLAPISILYQINMILDLTPLLLI-ALTSITLGGWGGLNQTQTRKIMAYSSIAHMGWMVAILKYNSSTMILNLLIYIILTISFFSMLHILSSTTILTM---SHSWNKTPLMPSLMLLTLLSLGGLPPLTGFLPKWAVIQELIKNNSILIPTLMAITALLNLYFYMRLIYSTTLTMFPTNNNTKMKW-QFEKMKPMLMV-------PTLTILSTLLLPLSPVMLPMG---MN-LIIPLITNTTLALLLVTIAFWLPQLNMYTEKSSPYECGFDPTESARLPFSMKFFLIAITFLLFDLEIALLLPIPWATQTMNLSLVLTVAMALITILALGLTYEWLQKG--LEWNE-MPSIYMNLIIAFLSSLLGMLMYRSHLMSSLLCLEGMMLSMFIMTSLTILNLHFTLANMVPIILLVFAACEAAIGLALLVMVSNTYGLDYVQNLNLLQCMLKIILPTLMILPLTWYSKKHNIWINTTIHSLMISTITL-SFLNCPYGNTMNFS-LTFFTDSLSTPLVILTTWLFPLMLLASQNHLSKESLTRKKLYISMLTLLQMFLIMTFTATELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLIALIYLQKFLGSLNLMINPLIIQHTL-NSW-----SNNTLWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMTIILEP-MTKYMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFIGATALMIAHGLTSSLLFCLANTNYERVHSRTMTLARGLQTLLPLAATWWLLASLANLALPPTINLIGELVVMMASFSWSHLTIILMGMNMIITALYSLYMLTTTQRGKYTYHINYINPSFTRENTLMIMHILPIILLSISPKLIMGYMY------MNLFPSL-IMLSLMLLIIPFMLL---ATKKYDY-NTYPNYVKNS-IACAFMTSLIPTITFLHTGKEMIISNWHWMTIQTMKFSMSFKMDYFSMIFVPVALFVTWSIMEFSMWYMHSDPLIHRFLKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFVVAMAWFLTYSNSWDFQQMFSLYSN-SNTLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLLEMNEMIQTITLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLLKPMPFTASSLLIGSLALTGMPFLTGFYSKDLIIEATNMSYTNAWALSVTLIATS-LTAVYSTRIIFFVLLGQPRFLPPTNINENNPLLMNPIKRLALGSIFAGFIISNNITPTTIHQMTMPWYLKLSALIVTILGFTLAMELNTLSSYLK--LKYPTQPILFSNQLGFFPTTAHRLYPLLNLSISQKTASSLLDLVWIEKSMPKFTAETHMAAST--TTSNQMGLIKLYFMS---FLITL--VLGMYLVL----------------- +>Rhinoceros_unicornis_greater_Indian_rhinoceros +----MNENLFASFTTPT-MMGLPIVILIIMSPSIMFPSPN-RLINNRLISIQQWLLQLTSKQMMSTHNNKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVLTGFRHKTKASLAHFLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGATLALMN-ISPTTSFITFITLVLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITITSMT-ITLFIMFQLKLSKHSYPS-NPELK-PINTSMH-TTP-W-ESKWTKIYSP-LS-LPQQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLALPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSLISLTAVMLMVFMVWEAFASKREVSTVELTSFNLEWLHGCPPPYHTFEEPVYVNL-K--------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTIKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLISTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLVMWFHYNSTLLLTLGLTTNLLTMYQWWRDIIRESTFQGHHTPAVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPMEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGIYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLVKIINHSFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWMIRYLHANGASMFFICLFIHVGRGLYYGSYTFLETWNIGIILLFTLMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAITHLLFLHETGSNNPSGIPSNMDKIPFHPYYTIKDILGALLLILVLLILVLFFPDILGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILLLIPYLHTSKQRSMMFRPLSQCMFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFSLILVLMPLAGIIENNLL---KW--------MF--------TINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPSTSSTSMFIIAPIMALTLALTMWVPLPMPHPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNAFTTILFLGAFHNPYMPELYTVNFTIKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPITMSSI-P-PQT--MNP-IVFSTILTTAIMGTVIVMMSSHWLMVWIGFEMNLLAIIPILMKKFNPR-AMEASTKYFLTQATASMLLMSAIIINLMHSGQW--TITKMFNPTASAIMTSALIMKLGLSPFHFWVPEVTQGISLMSGLILLTWQKLAPMSILYQIAPSINLDMLMTS-ALLSILVGGWGGLNQTQLRKIMAYSSIAHMGWMTAILTYNPTMTMLNMLIYIMMTLTTFMLLMLNSSTTTLSL---SHTWNKTPLITSLILIIMLSLGGLPPLSGFIPKWMIIQELTKNNSIILPTSMAIMALLNLYFYLRLTYSTSLTMFPSTNNMKMKW-QFENSKQMSLL-------PTLIIMSTLLLPLMPTMSILN---MN-LILTLLINTLLSSVLVLIAFWLPQLNIYTEKSSPYECGFDPMVSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLKTMLTMALILISLLAASLAYEWTQKG--LEWTE-MSLIHINIFLAFTVSLMGLLMYRSHLMSSLLCLEGMMLSLFIMATMMVLNSHFTLAIMMPIILLVFAACEAALGLSLLVMISNTYGMDYVQNLNLLQCMLKIIIPTLMLMPLTWLSKNNMIWINTTAYSLLISLISL-SFLNQFNEDSLYIS-LTFFSDPLSAPLLVLTTWLLPLMIMASQHHLSKEPITRKKLYITMLIMLQLLLIMTFTATELILFYVLFEATLIPTLIIITRWGNQTERLNAGFYFLFYTLTGSLPLLIALIHIQNITGSLNLLLIQYSAQTLP-NSW-----SNTFLWLACMMGFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMILNP-LTSHMAYPFLMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERTHSRTMILARGLQTLLPLMAMWWLLASLTNLALPPTINLVGELFVVVSSFSWSNLTIILMGTNIIITALYSLYMLIMTQRGKYTYHINNIKPSFTRENMLMALHLLPLLLLSLNPKIILGTMY------MNIFPSL-MLTSLFTLTLPIIAS---TLNIHKN-SNTPHHMKNI-ISFAFIISLIPTMMFIYSGQEMIISNWHWMTTQTLKLSLSFKLDYFSMIFVPVALFVTWSIMEFSIWYMHSDPHITQFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFIMSMAWFLSNMNSWDLQQIFTLDPN-HTNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTAQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKTMPFTATSLIIGSFALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLIATS-LTAAYSTRMIFFTLLGQPRFPTLITINENNPHLTNSIKRLLIGSIFAGFFISNNIYPTTTPKMTMPSYLKLMALIVTILGFALALELSLATYNLK--FKHPSNPLKFSSLLGYFPTIFHRLPPSMGLLASQKSASLLLDSMWLENILPKSISLFQMKSST--LVSNQKGLIKLYFLS---FLITL--TLSLLLL----------TPHG---- +>Mustela_frenata_long-tailed_weasel +----MNENLFSSFITPT-MMGLPIVIIITMFPSIMFPSPS-RLINNRLISLQQWLVQLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPYSFTPTTQLSLNLGMAIPLWAGTVITGFRYKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMN-ISTITAMITFTILVLLTTLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITILSMI-ITLFFMFQLKVSKYNFPE-NPEPK-LVATSKS-ITP-W-ENKWTKIYFP-HS-LPLQ----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMLGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGVGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGSINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDIWAKIHFTIMFVGVNTTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASKREVLTVELTSTNIEWLHGCPPPYHTFEEPTYVLS-K--------MAYPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISVMLTTKLTHTSTMDAQAVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTIMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASML----------MTHQTHSYHMVNPSPWPLTGALSALLTTSGLVMWFHYNSLLLLTLGTAANMLTMYQWWRDVVRESTFQGHHTPTVQKGLRYGMILFITSEIFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALLITILLGLYFTLLQASEYYEAPFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLTKIINNSFIDLPAPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFVCLFLHVGRGLYYGSYMFPETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALFLILTLMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILVLAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEYPFITIGQLASILYFMILLVFMPIASIIENNLL---KW--------MF--------MVNIISLIVPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSISMFVMAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEHLWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHTPYLPELYSINFTMKTLLLTISFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHMALPIMTASI-P-PQT--MKP-PILNIIMFTIVSGTIMVLMSSHWLTIWIGFEMNMLAVIPILMKKFSPR-TVEASTKYFLTQATASMLLMLGIIVNLLLTGQW--TVLNTLSPIASNMMTTALAMKLGLAPFHFWMPEVTQGVPLTSGMILLTWQKIAPLSILYQISPSMNPHLLMTM-AIMSILVGGWGGLNQTQLRKILAYSSIAHMGWMVAVTTYNPTITLLNLLIYIMMTLGTFMLFTLSSSTTTLSL---SLMWNKLPLITSLTLIIMLSLGGLPPLSGFIPKWMIIHELTKNNMTILAMLMAITALLNLYFYMRLTYATALTLFPSTNTMKMKW-QFEYTKNTTLL-------SPLIVTSTMLLPLTPMMSTLF---MN-MMLTMFINVLLASLLIMVAFWLPQLNVYTEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSTNLKTTLTMALALISLLAASLAYEWTEEG--LEWNE-MSMVYINIFLAFTLSFMGLLIYRAHLMSSLLCLEGMMLSLFVMMTITILTNHLTLASMTPIILLVFAACEAALGLSLLVMISTTYGTDYVQNLNLLQCMLKIIVPTIMLIPLTWLSKPNMIWINTTTHSMLVSLISL-SYLNQLTDNNLNFS-LLFFADSLSAPLLALTTWLLPLMIMASQHHLSKETLIRKKLYITMLIMLQLFLIMTFAATELIMFYILFEATLMPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLWIQNDLGTLNLLIIQYWTQPLL-NSW-----SNTLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITLLLNP-LTNYMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIMAVLIQSPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQMLLPLMAAWWLLASLTNLALPPTINLVGELFVVMASFSWSNITIVLMGINITITALYSLYMLITTQRGKYTHHIKNIKPSFTRENSLMALHLLPLLLLSLNPKVILGPIY---MKVMNLFTSS-MLVTLFMLSLPIMMT---STTMYTN-KLYPQYVKTT-ISYAFMISLIPTMMFLHLGQDTMISNWHWITIQTMKLSLSFKLDYFSMIFMPVALFVTWSIMEFSMWYMHSDPYINRFFKYLLLFLITMMILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDVGFILAMAWFLINLNTWDLQQIFMTNHK-NLTMPLMGLMLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEHNKTMQTITLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKALPFTTTSLIVGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLMTLVATS-MTAAYSTRIMFFALLGQPRFNPIITINENNPLLINSIKRLLFGSIFAGFLISNNITPTTTPQMTMPHYLKMTALIVTILGFILALELNLTMQSLK--FKYPSSLFKFSNMLGYFPTIAHRLMPKTNLLMSQKSASALLDMTWLETILPKSISHFQMKSSI--TISNQKGLIKLYFMS---FMLTL--TLSLLAL----------NFHE---- +>Sminthopsis_douglasi_Julia_Creek_dunnart +----MNENLFAPFICPS-IMDISTLPIIILFPCLIFSAPK-RWLPNRMQILQIWLIRLITKQMMTMHNKLGRTWTLMLMSLILFIATTNLLGLLPYSFTPTTQLSMNLGMAIPLWMGTVIMGFQNKPKASLAHFLPQGTPTPLIPMLIIIETISLLIQPVALAVRLTANITAGHLLIHLISSAALALLS-ISITLSSITFIILFLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLNTSTWLHVIGFTL-FGIFCAFQLQLIGIEMIYIYPPED-MIKLPDI-PFP-W-EKKWTKIYLP-LS-SVLVS---MFITRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGMLIGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYAGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYMLNDMWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNILSSIGSFISLTAVILMVFIIWEAFASKREVASVELTTTNIEWLYGCPPPYHTFEQPVFIKS----------MPYPMQLGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYVLILMLTTKLTHTSTMDAQEVETIWTIMPAVILVLIALPSLRILYMMDEIYNPYLTVKAMGHQWYWSYEYTDYEELSFDSYMVPTQDLAPGQLRLLEVDNRVVLPMELPIRMLISSEDVLHAWAVPSLGLKADAIPGRLNQATLTSTRPGVYYGQCSEICGSNHSFMPIVLEMSTLKYFENWSHMMQ----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLTMWFHFHSSLLLLIGITSMLLTMYQWWRDVVREGTFQGHHTPVVQKGLRYGMILFITSEVFFFVGFFWAFYHSSLSPALELGGCWPPVGISPLNPLEVPLLNTAILLASGVSITWAHHSLMEGNRKQMIQALSITIALGLYFTALQAMEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSLFLMVCLLRQLFYHFTSTHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNLRKTHPLLKIINHSFIDLPAPSNISAWWNFGSLLGICLMIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNLHANGASMFFMCLFLHVGRGIYYGSYLYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLAEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHETGSNNPSGINPDADKIPFHPYYTIKDALGFMFLLLVLLSLALFSPDSLGDPDNFSPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLVIPYLHTANQRSMMFRPVSQTLFWILTANLMTLTWIGGQPVEQPFIIIGQLASILYFTLILILMPLAGLFENYMLK-PKW--------MF--------TLNLLLYIIPILLAVAFLTLIERKVLGYMQFRKGPNIVGPYGLLQPFADAVKLFTKEPLRPLTSSILMFILAPILALSIALTIWTPLPMPNALLDLNLGLLFILSLSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVSLAIILLSVMLINGSFTLKTLSTTQENCWLILTTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIIAMNAITTILFLGSSLTSNLDHIDTISFMMKTLLLTMAFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLWYISLPIALSCI-P-PQL--MSP-YVLIILSLSLLIGTCLTLSSSHWFTAWMGLEINTLAIIPLMTSPNNPR-TTEAATKYFLTQATASMMMMFAIIYNAWMTNQW--TLFQLLDQWATVFMTLALSMKLGLAPFHFWVPEVTQGISLLSGMILLTWQKIAPTAIIYQIAPCLDMNILLTF-ALLSTILGGWGGLNQTHMRKILAYSSIAHMGWMIIIVHINPTMTILNLTIYIMATLTMFLTLNISNTTKIKSL---GSLWNKSSPATIIILLTLLSLGGLPPLTGFMPKWLILQELINNGNITTATIMALSALLNLFFYMRIIYASSLTMFPSINNSKMQW-LNDPTNPTTLI-------PSAAIISSLLLPLTPMFITLT--MIN-MILTLFINSALATIVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQLPTTGTMLILSFSLIILLTGGLAYEWFQKG--LEWTE-MLSINLNLIIAFLLALMGVLIYRSHLMSTLLCLEGMMLSLFILMTLLITHFHMFSMAMTPLILLVFSACEAAIGLALLVKISATHGSDHVQNLNLLQCMLKILMSTLMLIPLTWFSKKSWIWINTTTHSFLISIWSL-TLLHHYSDLGYNYS-SSFSLDSLSGPLLVLSCWLLPLMVIASQNHLAHEPLTRKKIYLTMLIILQLSLIMAFTASELIMFYILFETTLIPTLIIITRWGSQNERLNAGLYFLFYTLVGSLPLLVALLHLHANLGSLHMLTMALLAPTMS-SSI-----STTMLWYACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITTLTEP-MTTNLCYPFMILSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMGLVIVAALMQSPLSFMGATVLMIAHGLTSSMLFCLANTNYERIHSRTLILTRGLQMVLPLMCAWWLLASLANLAQPPSINLLGELMVILTTFSWSNFSLILLGANTVITALYSLHMLISSQRGKFTHHMNPIKPTFTREHALMALHLLPLLILSIAPKFILGPTY------MNYLLNSFLLLSITMLTIPLIYS---LLFPHKT-NNFPILCKNT-VKLAFFTSIPPLILFISSGQEATITNWQWFSINSFNLTMSFKLDYFSITFIPIALYVTWSILEFSLWYMHADPNIHRFFKYLITFLFTMILLVSANNLFQLFIGWEGVGIMSFMLIGWWFGRTDANTAALQAVLYNRIGDIGFILTMAWLMINSNSWDIQQILMMNTN---TLALLGLIIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFSPMMALNQTALTIMLCLGSITTLFTAICAITQNDIKKIVAFSTSSQLG--LMMVTLGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLFTLLPITSSAVMLGSLALMGTPFLAGFYSKDSIIEAMNMSHVNTWALLITLVATT-LTAVYSMRLIHFALLNEPRFLPMSPLNENNPDLINPIMRLALGSIFAGFLLTLNLPPTSTIPMTMPTLTKLSALIITILGILMAIELNSLTNKMP--NKSLIHTHNFSNMLGYFTHIFHRLNPLANLHMGQHIATMLIDLSWYEKTGPKGQANFHSSASS-ASTSAQKGLIKMYFLS---FVISI--MLVLTIL------------------ +>Diceros_bicornis_black_rhinoceros +----MNENLFASFTTPT-IMGLPIVILIIMSPSIMFPTSN-RLINNRLISIQQWLLQLTSKQMLSIHNNKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVFLGFRHNTKTSLAHFLPQGTPIFLIPALVIIETISLFIQPVALAVRLTANITAGHLLMYLIGGATLALMN-ISPTTALVTFIILILLTILEFAVALIQAYVFTLLVSLYLHNNTMPQLDTSTWSITIMSMI-ITLFIMFQLKLSKYSYPS-NPELK-LTKTPAH-TMP-W-ESKWTKTYLP-LS-LPQQL---MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLALPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQTWAKIHFMIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFMIWEAFASKREVSTVELTTSNLEWLHGCPPPYHTFEEPVYVNL-K--------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAIPSLGLKTDAIPGRLNQTTLVSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEKWSASMI----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHYNSTLLLTLGLTTNLLTMYQWWRDIVRESTFQGHHTLVVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGCWPPTGIYPLNPMEVPLLNTSILLASGVSITWAHHSLMEGNRKHMLQALFITISLGIYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSAFLIVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPTPSNISAWWNFGSLLGICLILQILTGLFLAMHYTPDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFIHMGRGLYYGSYTFLETWNIGVILLFTLMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAITHLLFLHETGSNNPSGIPSNMDKIPFHPYYTIKDILGILLLILTLLTLVLFSPDILGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALALSILILLIVPFLHTSKQRSMMFRPLSQCMFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFSLILVLMPLAGIIENNLL---KW--------MF--------TINILLLVIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPSTSSTTMFIIAPILALTLALTMWIPLPMPYPLINMNLGILFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNAFTTILFLGAFHNPYMSELYTINFTTKTLLLTTSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPITTSSI-P-PQT--MNP-IVFSTILTTAILGTMIVMTSSHWLMIWIGFEMNLLAIIPILMKNFNPR-AMEAATKYFLTQTTASMLLMMAIIINLMFSGQW--TITKIFNPTASIIMTSALVMKLGLSPFHFWVPEVTQGISLMSGLILLTWQKLAPMSVLYQIAPSINPNMLMAT-ALLSILVGGWGGLNQTQLRKIMAYSSIAHMGWMTAILMYNPTMTMLNMLIYIMMTLTTFMLFMLNSSTTMLSL---SLTWNKTPLITSLILITMLSLGGLPPLSGFIPKWMIIQELTKNDSIILPTSMAIMALLNLYFYMRLTYSTSLTMFPSMNNMKMKW-QFENSKRMNFL-------PTLIIMSTLLLPLTPIMSILN---MN-LMLTLFINMSLASMLVLIAFWLPQLNIYTEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLKTMLTMALALISLLAASLAYEWTQKG--LEWAE-MSLIHINIFLAFAASLVGLLMYRSHLMSSLLCLEGMMLSLFIMATMTVLNSNFTLASMMPIILLVFAACEAALGLSLLVMISNTYGTDYVQNLNLLQCMLKIIIPTLMLIPLTWLSKNNMIWINTTAYSLLISLISL-PLLNQFNENSLNMS-PMFFSDPLSAPLLVLTTWLLPLMIMASQHHLSKEPPARKKLYITMLVMLQTFLIMTFTATELISFYILFEATLIPTLIIITRWGNQTERLNAGFYFLFYTLTGSLPLLIALTHIQNLTGTLNLLLIQYSTQTLP-NSW-----SNAFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMILNP-LTSYMAYPFLILSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERTHSRTMILARGLQTLLPLMAMWWLLAGLTNLALPPTINLIGELFVVMSSFSWSNITIILMGTNIIITALYSLYMLTTTQRGKYTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGTLY------MNMFPSL-MLTSLLMLTLPIITI---TINTHKN-NTYPRYVKNI-ISYAFITSLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSFKLDYFSMIFVPVALFVTWSIMEFSMWYMHSDPHITQFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAILYNRIGDIGLIMSMAWFLLNMNSWDLQQIFTLNHS-HTNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIIAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKVMPFTSTSLIIGSLALTGMPFLTGFYSKDLIIETANMSYTNAWALLITLIATS-LTAAYSTRMIFFTLLGQPRFPTLVTINENNPLLMNSIKRLLIGSIFAGFLISNSIYPTTIPKMTMPYYLKLTALTVTILGFALALELSLATYNLK--PKHPSSLLKFSSLLGYFPTILHRLPPFMGLSTSQKSASLLLDLTWLESILPKSISQFQVKTST--LVSNQKGLIKLYFLS---FLITL--TLSLLLL----------MPHE---- +>Loris_lydekkerianus_gray_slender_loris +----MDQNLFAPFITPT-MMGMPIVIFIIMFPLMLFSNPT-RLISNRVTSMQQWLILLTLKQLMSTHNTKGQTWSLMLISLIMFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPLWAATVITGFRHKTKATLAHFLPQGTPPPLIPMLVLIETISLMIQPLALAVRLTANITAGHLLMHLIGNATLVLSS-ISVTTASITFIILIMLSILELAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFTTILSMT-LTLFMLLQLKLSKFLYPL-HPTQK-FTKTYHQ-TNP-W-EKKWTKTYLP-HS-LPLQ----MFVNRWLYSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVESGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVSFYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDQTWAKIHFTIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTMWNSISSIGSFISLTAVMLMIFMVWEAFASKREVLMVELTNTNLEWLHGCPPPYHTFEEPTYVKA----------MAHPVQFGFQDAASPIMEELLYFHDHTLMIVFMISSLVLYIISLMLSTELTHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEINTPSLTLKTMGHQWYWSYEYTDYDKLCFDSYMVPTPDLEPGDLRLLEVDNRVVLPTEMSIRMLISSEDVLHSWTVPALGIKTDAIPGRLNQATIMTSRPGIYYGQCSEICGANHSFMPIVLELVPLKYFEEWLLKTL----------MTHQTHTYHMVNPSPWPLTGAISALLMTSGLIMWFHFNSTTLLTLGLLTNTLTMIQWWRDIIREGTFQGHHTPMVQKGLRYGMILFIVSEVFFFAGFFWSFYHSSLAPTPELGGCWPPTGINPLNPLDVPLLNTAVLLASGVSITWAHHSLMEGNRKNTIQALSITIALGIYFTLLQASEYLETSFTMSDGVYGSTFFMATGFHGLHVIIGSTFLSTCLIRQLNFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLTKIINHSFIDLPTPSNISSWWNFGSLLGLCLVVQIMTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWMIRYLHANGASMFFMCLFIHIGRGIYYGSFTFLETWNIGILLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALTAIHLLFLHESGSNNPSGMTSDSDKIPFHPYYTLKDILGVIALLTILSTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALISSILILALMPFLNMAKQRSMMFRPLSQCLFWTLVANLMVLTWIGGQPVENPFIIIGQLASIMYFSTILIFMPLTNLLENKLL---KW--------MF--------MLNLLLLIIPIILAMAFLTLLERKTLGYMQLRKGPNIVGPNGLLQPFADAMKLFIKEPLKPLTSSTLLYMIAPTLALSIALIMWTPLPIPHPLININLGILFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSILMMSGSFTLSTLIKTQEHLWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTATIFMSAIHNMHSTELFSTSFTLKTLLLTTAFLWVRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHAAMPIFLANI-P-PQT--MNP-PILLLIIYTLFTGTILTMISSHWLMTWVGLEMNMLAITPILIQKAMPR-STEAATKYFLTQATASMILMMAIIINMMHSGQW--TMTKTSHPLTSLMILLALAIKLGMAPFHFWMPEVTQGVSLMSGMILLTWQKLAPFSILLQMNQSMNPNITLSI-AMMSIIIGGWGGLNQTQLRKILAFSSISHMGWMIAILTFNPPTTMLNLLIYLMLTMSMFIMLLSNSSTTTLTM---SHLWNKTPMLISTFLMTLLSLGGLPPLSGFIPKWIIIQELSKNYNIILPTMMAIMSLLNLFFYMRLVYSSSLTMFPTSNNLKLKW-QLNTPKPHTMT-------ASLITLSSMLLPLSPMISILN---MN-TAIALTTNTMLALMLVLVAFWLPQLNIYAEKHSPYECGFDPLDSARLPFSMKFFLVAITFLLFDLEIALLLPLPWALHTNTLNLMLSMTLLLILILAMGLAYEWTQNG--LEWQE-MSLISTNIILAFITALMGVLIYRSHLMSSLLCLEGMMLSMFILVSLTTLNLHFTLSNIAPIILLVFAACEAAVGLALLVMVSNTYGMDYIQNLNLLQCMLKIMIPTIMLYPVTWLSHYKTLWISTTAYSLMISPISL-HLLHQPINY-LNFS-PTHFSDTLSTPLLILTTWLLPLMIMASQHHLHKEPLMRKKLYISMLISLQVLLITTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLLGSLPLLVTLIYTQNFLGSLNLHILPLFNQNMSLNSW-----SNNLTWIACMMAFMVKMPLYGTHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITTILNP-LTNSMSYPFLTLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMMFCLANSNYERTHSRTMILARGLQTLLPLMALWWLAASLTNLALPPSINLIGELMIMITSFAWSKLSMVLTGLNTLITALYSLYMFTMTQHGKYTFHNNNIKPSFTRENTLMSLHILPLLSLSLNPKLILGPTL------MNTTMSTTTLTSLIILTLPIMLS---LINNHNK-INFPSLVKSS-ISYAFFISLIPALMFMYSNQDSTITNWHWITTQTLNLSTSLKLDYFSTLFMPVALFVTWSIMEFSMWYMNSDPQMNKFFKYLLMFLITMMILVTSNNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILFNRIGDIGFILSMVWFLLNLNSWEIQQMLVLYPN-TNTLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMENNKTMQTLTLCLGAITTLFTAMCALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSSSLTIGSLALTGVPFLTGFYSKDLIIETANTSSTNAWALLMTLIATS-LTAVYSTRIIFFALMGQPRFPSTSLFNENNPQLTNPIKRLAIGSIFAGYLISNNIPTSSIPQMTMPLYLKMTAMTVTILGFSMAMEINLIATNLK--FPHTQKPYIFSNSLGFFPTTLHRLLPNTNLKSSQNMSSTLLDLIWLEKSMPKNLTQMNLLASK--TISNQKGLIKLYFLS---LLTTI--LIIFTLMI----------------- +>Ovis_orientalis_Asiatic_mouflon +----MNENLFASFITPM-MFGLPLVTLIVLFPSLLFPTSN-RLVNNRLISLQQWMLQLVSKQMMSIHNTKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALMS-INTTTALITFIILILLTVLEFAVAMIQAYVFTLLVSLYLHDNTMPQLDTSTWLTMILSMF-LVLFIIFQLKISKHNFYH-NPELM-TTKTPKQ-NTP-W-ETKWTKIYLP-LS-LPL-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL-K--------MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLFYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSTALLTLGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRYHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MINIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFIFPFIIAALAMVHLLFLHETGSNNPTGIPSDTDKIPFHPYYTIKDILGAILLILILMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLIILVMMPVASIIENNLL---KW--------MF--------MINVLTLIIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLIITQEQVWLIFPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNIFTTTLFLGAFHNPYMPELYTINFTIKSLLLTITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPILLSSI-P-PQT--MNP-IILIIILMTVMLGTIIVMISTHWLLIWIGFEMNMLAIIPIMMKKHNPR-ATEASTKYFLTQSTASMLLMMAIIINLMFSGQW--TVMKLFNPMASMLMTMALAMKLGMAPFHFWVPEVTQGIPLSSGLILLTWQKLAPMSVLYQILPSINLDLILTL-SILSITIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTMTLLNLIIYIIMTSTMFTLFMANSTTTTLSL---SHTWNKAPIMTILVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPTLMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKW-QFPTTKRMTLL-------PTMTVLSTMLLPLTPILSILE---MN-LMITLLTNFTLATLLVTIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLNTMLTMALLLIFLLAVSLAYEWTQKG--LEWTE-MSLVYMNIMMAFTVSLTGLLMYRSHLMSSLLCLEGMMLSLFILATLMILNSHFTLASMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKYIIPTMMLMPLTWLSKNSMIWINTTLHSLLISLTSL-LLLNQFGDNSLNFS-LTFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLARKKLFISMLILLQLFLIMTFTATELIFFYIMFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTMGSLNFLILQYWVQPMP-NSW-----SNTFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITLLLNP-ITDFMAYPFIMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPSINLIGELFVVMSTFSWSNITIILMGLNMVITALYSLYMLITTQRGKHTHHINNILPSFTRENALMSLHMLPLLLLSLNPKIILGPLY------MNLFSSL-TLVTLILLTMPIAAI---NFNTHKF-TNYPLYVKTT-ISCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDFFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLINLNTWDLQQIFMLNPN-DSNLPLMGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFAQSIMLCLGAMTTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESANTSYTNAWALLMTLVATS-FTAIYSTRIIFFALLGQPRFPTLININENNPFLINSIKRLLIGSLFAGFIISNNIPPMTIPQMTMPHYLKMTALTVTILGFILALEISNTTHYLK--FNYPSNTFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLETILPKTISLAQMKMST--TITSQKGLIKLYFLS---FLITI--LISTTLL----------NFHE---- +>Sapajus_apella_Tufted_capuchin +----MNQNLFASFNMPM-ILGVPLATLFILFPTMLITPSN-NLNNNRFSSLQQWLIQLMLKQMMMNHTTKGQAWSLMLLTLITFITLNNLLGIMPYTFTPTTQLSMNLGMAIPLWMATVLTGLRFKTKATLAHLLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLLGDTTLTLLS-IYLSSSVITIIVIILLITLELGVALIQAYVFTLLVSLYLHNNSMPQLDISPWPMVTLSMI-LTLFYAMQLKMLNFTFHT-TTLSE-LTKMQNQ-KTT-W-ELKWTKIYSP-LS-MCQ-----MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTIFDPAGGGDPILYQHLFWFFGHFEVYILILPGFRMFLPIVLTYSNKKKPFGYMGFVWPMNSMGFLGLIVWAHHMFTVGMDLDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGVVLANSSLDIVLHDTYYVVAHFHYVLSMGAVYAIMGGFLHWFPLFSGYTLDQTYAKIDFTIMFVGVNMTFFPQHFLGLSGMPRRYEDYPDAYTAWNIISSVGSFISLTAVILMIFMIWEAFSSKRKVRTIEQMITNLEWLYGCPPPYHTFEEATYVKLLNEKG-----MATPAQLGLQNATSPIMEELIAFHDHTLMIIFLISSLVLYIISLMLTTKLTHTSTMNAQEIEMIWTILPAIILIMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYEDLFFDSYIMPTYYLQPGEFRLLEVDNRTTLPMEADIRMLISSQDVLHSWAVPSLGVKADAIPGRLNQAMLASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWASYLYIV--------MTHQTHAYHMVNPSPWPLTGALSAFLLTSGLIMWFHFYYTTLLNAGLLASAMTMSQWWRDVVRESTYQGHHTSPVQKGLRYGMVLFIVSEVFFFAGFFWAFYHSSLAPTPQTGGHWPPTGILPLNPMEVPLLNTAVLLASGVTITWAHHSLMEADQENSTQALSLTIALGIYFTYLQMSEYSETPFTISDGIYGSTFFMATGFHGLHVIIGTTFLATCYIRQQLCHFTPNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTSSRKTHPLMKIINNSFIDLPTPSNISSWWNFGSLLGACLMIQITTGLFLAMHYTPDTSTAFSSVAHITRDINYGWMIRLLHANGASVFFACLFLHIGRGLYYGSFLLLKTWNIGTILLLMTMATAFFGYASPCGQISFWGATVITNLLSAIPYTAHNLVQWIWGGFSVDKPTLTRFFTFHFILPFIISALPTIHLLFLHETGSNNPSGMASSPDKIMFHPYYTTKDIFGLTLLLLLLTSLTLFTPDLLSDPDNYTLANPLNTPPHIMPEWYFLFAYTILRSIPNKLGGVLALLLSIMILTIIPATHLSKHESMMFRPITQILFWTLAADLLTLTWIGGQPVWFSFEVIGQTASITYFLII-TLIPLSAQTENKLL---KW--------MF--------TINLLLLITPALIAMAFLTLMERKILGYMQLRKGPNTVGPYGVLQPIADAMKLFTKEPLLPSVSTTTLYMAAPTLALTIALLLWTPLPMPYSLINFNLGLLFVLATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLXIILLSTLLMSGSFNLHSLITTQEQSWLLLPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFTATPYNMLMTELYTMNFMTKTLLLTILFLWIRTAYPRFRYDQLMYLLWKKFLPLTLALCMWYISMPMLLSGI-P-PQT--MNP-LAHLIISLTILMGTMVTTLSSHWFLVWVGLELNMLAIVPMLAKNMSPR-STEASTKYFLTQASASMILLMTIFLNNLLYGQW--TINPPSNQILSTMMLIALVLKLGMAPLHFWLPEVTQGIPLIPTMLILTWQKLAPMSIIIQIFPSINSNILLMI-SLMSIMAGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYNPNTTILSLLIYILLTISTLTTFYLNSNTTTLSL---SHTWNKLTWMMPMIPMMMMSLGGLPPLTGFSPKWAIMQEITKNNSLIFPLTMTMLTLMNLYFYMRLTYSISMTMFPTSNNTKISW-QLKYMKPTPLL-------SPLMISSTFLLPVTPLMLMI----MN-LMLTLMINTLLALLLITITFWVPQLNKYTEKHNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLTTMLIMALLLISLLAASLAYEWTEKG--LEWTE-MSMVYINIFLAFILSLMGMLVYRSHLMSSLLCLEGMMLSLFVMMSVTILNNHLTLASMMPIVLLVFAACEAALGLSLLVMVSNTYGTDYVQNVGSLQCMLKIIVPTIMMIPTMYLSKNHMLWINTMICSLSISALTL-MILHMPN-NPCNLS-LTFFSDPLTSPLLALTTWLLPLMILATQQHIYSNSLPRKKLYTSMLIILQISLIMTFAATELIVFYILFETTLIPSLIIITGWGYQPERLNAGSYFLFYTLAASLPLLITLLYSLNNLGTLNILTMTINTMELL-TSW-----TNYIMWLGGTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGSYGMMRIIPTLNP-LTEKMSYPFLILSLWGMVMTS--SICLRQADLKSLIAYSSISHMALITLAILIQTPWSLTGAMLLMVAHAFTSSLLFCLANSNYERIHSRTMMFTRGLQALFPLLTLWWLLANLANLALPPTINLLGELSTILAAFSWSNFTIAFTGFNMLITALYSLHMFTSTQRGPLTHSTSNVKPLFTRENTLMLMHMAPIVLLTLNPKLMMGLMP--------MHFSI-TLMTLIPLLVPIMTT---LVKSNKN-PVYPHYVKLA-NIYALITSTLSMTMFILTGQESMISNWHWATIQTIKLSLNFKLDFFSMMFTPVALFVTWSIVEFSMWYMNSDPNINQFLKYLLMFLITMLILITANNLFQLFIGWEGMGIMSCLPNSWVNGRAEANTAALQAILYNRIGDIGFILAMAWFFLYSNSWDFQQMFILNST-TNLFPLMSLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLIIRFHPLIENNLLMQTLTLSLGAITTLFTAICALTQNDMKKIVAFSTSSQLG--LMTVTVGINQPHLAFLHICTHAFFKAMLFLSAGSIIHNLNNEQDIRKMGGLFKTMPFTASSLIIGNLALMGTPFLTGFYSKDLIIEAINTSYTNAWALTTTLVATS-LTAMYSIRIMFFTLTEHPRFMTSTLINENNNPLMNPIYRLAVGSVLAGFLISNCIPPTTYPQMTMPLHLKLTALSVTTLGLLMAMELNLLTNNMK--LSTPVKTYYFSNMLGFYSITTHRLNPHLNLTTSQNFIFTLLDLFWLEKSMPKTTMQMQTSMAT--ITSTQKGLIKLYFLT---FFIPP--LLALLLTI----------------- +>Cebus_albifrons_white-fronted_capuchin +----MNQNLFASFNMPM-ILGIPLVALFILFPTMLITPSN-NLNNNRSSSLQQWLIQLVLKQMMTNHTTKGQTWSLMLLTLITFITLNNLLGITPYAFTPTTQLSLNLGMAIPLWMATVLMGLRFKTKATLAHLLPQGTPIPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLMHLLGDTMLILLS-IYLSSSVITVIVIILLITLELGVALIQAYVFTLLVSLYLHNNSMPQLDISPWPMVTLSMI-LTLFYAMQLKMLKFIFHT-TPLSK-LTKIQNQ-KTT-W-ELKWTKIYLP-LS-MYQ-----MFMNRWLFSTNHKDIGTLYLMFGAWAGATGTALSLLIRAELGQPGSLMEDDHVYNVIVTSHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGVGTGWTVYPPLAGNMSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPATTQYQTPLFVWSVLITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGVVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNIISSVGSFISLAAVILMIFMIWEAFSSKRKVLTIEQMSTNLEWLYGCPPPYHTFEEATYGKTPK--------MATPAQLGLQNATSPIMEELIAFHDHTLMIIFLISSLVLYIISLMLTTKLTHTSTMNAQEIETIWTILPAIILIMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYEDLFFDSYIMPTYYLQPGEFRLLEVDNRTTLPMEADIRYLISSQDVLHSWTVPSLGVKADAIPGRLNQAMLASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWASYLYIV--------MTHQTHAYHMVNPSPWPLTGALSAFLLTSGLVMWFHFYYTPLFNAGLLASAMTMAQWWRDVVRESTYQGHHTMPVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPQTGGHWPPTGIFPLNPMEVPLLNTAVLLASGVTITWAHHSLMEANQENSTQALSLTIALGIYFTYLQVSEYSETPFSISDGIYGSTFFMATGFHGLHVIIGTTFLATCYIRQQLYHFTPNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTSPRKTHPLMKIINSSFIDLPTPSNISSWWNFGSLLGACLMIQITTGLFLAMHYTPDTSTAFSSVAHITRDINYGWMIRLLHANGASMFFVCLFLHTGRGLYYGSFLFLNTWNIGTILLLMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYTGHNLVQWIWGGFSVDKPTLTRFFTFHFILPFIITALATIHLLFLHETGSNNPSGMASSPDKIMFHPYYTTKDIFGLTLLLLLLTSLTLFTPDLLTDPDNYTLANPLNTPPHIKPEWYFLFAYTILRSIPNKLGGVLALLLSIMILTIIPATHLSKQQSMMFRPITQILFWTLAADLLTLTWIGGQPVEYPFEAIGQTASIAYFLII-TLIPLSALTENKLL---KW--------MF--------MINLLLLITPALVAMAFLTLTERKILGYMQLRKGPNIVGPYGVLQPIADAMKLFTKEPLLPITSTTTLYMIAPTLALTISLLLWSPLPMPYSLVNFNLGLLFMLATSSLAVYSTLWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLQSLITTQEQSWLLLPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFTATSYNMITTELYTLNFTTKTLLLTTLFLWIRTAYPRFRYDQLMYLLWKKFLPLTLALCMWYISMPMLLSGI-P-PQT--MNP-LAHLIISLTIPMGTMITILSSHWFLVWTGLELNMLAIMPMLAKNMNPR-STEASTKYFLTQASASMILLMTIFLNNLLYGQW--TINPPSNQVLSTMMLMALVLKLGMAPLHFWLPEVTQGIPLIPTMLILTWQKLAPMSIIIQIFPSINSSALLMI-SLMSIMIGSWGGLNQTQLRKSLAYTSITHMGWMMAVLFYNPNITALSLLIYIFLTISTLMTFYSNSNTTTLSL---SHTWNKLTWVMPMIPMMMMSLGGLPPLTGFSPKWAIMQEITKNNSLILPLTMTMLTLMNLYFYMRLTYSISMTMFPTSNNTKISW-QLKHLKPMPLL-------PPLMISSSLLLPITPLMLMT----MN-LMLTLATSTLLALLLITITFWMPQLNKYTEKHNPYECGFDPTTSAHLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTDNLMLMTNMVFTLLIILALGLAYEWTQKG--LDWVD-MPFIYINTALAYSMSLLGLLIYRSHLMSSLLCLEGMMLSLFIMMTTMTLNMHLMLMYMLPIILLVFAACEAAVGLALLILISNLYGLDYVQNLNLLQCMLKIILPTIMMIPTMYLSKNHMMWINTMICSLSISALTL-MILHMPN-NPCNLS-LTFFSDPLTSPLLALTTWLLPLMILATQQHIYSNSLPRKKLYTSMLIILQISLIMTFAATELILFYILFETTLIPTLIIITRWGYQPERLNAGSYFLFYTLAGSLPLLITLLYCLNNLGTLNILTMTINTKELL-TSW-----TNNIMWLGCTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGSYGMMRIIPTLNP-LTEKMSYPFLILSLWGMVMTS--SICLRQADLKSLIAYSSISHMALITLAILIQTPWSLTGAMLLMVAHAFTSSLLFCLANSNYERIHSRTMMFTRGLQALFPLLTLWWLLANLANLALPPTINLLGELSTILAAFSWSNFTIAFTGFNMLITALYSLHMFTSTQRGPLTHSTSNVKPLFTRENTLMLMHMAPILLLTLNPKMMMGLMP--------MHFSI-TLMTLIPLLVPIMTT---LVKSNKN-PLYPHYVKLA-IIYALITSTLSMTMFILTGQESMISNWHWATIQTIKLSLNFKLDFFSMMFTPVALFVTWSIVEFSMWYMNSDPNINQFLKYLLMFLITMLILITANNLFQLFIGWEGMGIMSFLLISWWYGRTEANTAALQAILYNRIGDIGLILAMAWFFLHSNSWDFQQMFILNPT-TNFFPLMSLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLIIRFHPLMENNLLIQTLTLSLGAITTLFTSICALTQNDMKKIVAFSTSSQLG--LMTVTVGINQPHLAFLHICTHAFFKAMLFLSAGSIIHNLNNEQDIRKMGGLFKTMPFTASSLIIGNLALMGTPFLTGFYSKDLIIETINTSYTNAWALTTTLVATS-LTAMYSGRIMFFTLTGYPRFTTSTLINENNNLLMNPISRLAVGSILAGFLISNCLPPTMYPQMTMPFHLKLTALSVTTLGLLMAMELNSLTNNMK--LYTPVKIYYFSNMLGFYSITTHRLNPHLNLTTSQNFTSTLLDLFWLEKSMPKLTTQTQISMAT--ITSTQKGLIKLYFFT---FFIPL--ILTLFLTI----------------- +>Tonatia_saurophila_stripe-headed_round-eared_bat +----MNENLFSSFVTPT-MMGLPIVVLIIMFPTMLFPSTN-RLINNRLVAIQQWLIYLTSKQMLSIHNQKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVILGFRHKTKASLAHFLPQGTPLPLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALTN-INTTTALITFTILMLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITITSTL-LTLFIIMQLKISSHYFHS-NPEPK-TTKTIKS-STP-W-ETKWTKIYSP-LS-LPQL----MFISRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGVGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLLTGYTLNPTWAKIHFLVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNAVSSMGSFISLTAVMLMVFMVWEAFASKREVSIAELTITNLEWLHGCPPPYHTFEEPTYVNP-K--------MPYPFQLGFQDATSPIMEELLHFHDHTLMIVFMISSLVLYLISSMLTTRLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPSMTIKAMGHQWYWSYEYTDYSDLCFDSYMIPTTDLKPGNLRLLEVDNRMVAPMEMTIRMLISSEDVLHSWAIPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLETVPLNHFEKWSTSML----------MTHQTHAYHMVNPSPWPLTGALSALLLTSGLVMWFHFNSMTLLILGLLTNTLTMYQWWRDIIRESTFQGHHTPVVQKGLRYGMILFIISEVFFFSGFFWAFYHSSLAPTPELGGYWPPAGITPLNPLDVPLLNTSVLLASGVSITWAHHSLMEGNRKHMIQALSITIALGLYFTLLQASEYYEAPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKTHPLLKIINNSLVDLPTPSNLSSWWNFGSLLGVCLAVQILTGLFLAMHYTSDTATAFNSVTHICRDVNYGWMLRYTHANGASMFFICLYMHVGRGLYYGSYMFSETWNVGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFLLPFLVSALVMVHLLFLHETGSNNPTGIPSDPDLIPFHPYYTIKDILGIAIMLTILTTLVLFYPDLLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIIPMLHTSKQRSMMFRPLSQCLFWLLVAVLLTLTWIGGQPVEHPYIIIGQSASILYFLILLVLMPLVSTMENYLL---KW--------MY--------LINLLSTIVPVLLAVAFLTLVERKILGYMQLRKGPNVVGPFGLLQPIADAIKLFTKEPSRPLTSSVSMFIIAPILALALALTMWSPLPMPYPLTNMNLGVLFMLAMSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYSLTTLITTQEYIWLILPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTTILFLGAYNNPTTPELYTINLTTKTLLLTMLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYTTMPIMMASI-P-PQT--MNP-IIFSTIMSTIILGTTITITSSHWLTVWMGFEMNMLAIIPILMKTHHPR-STEAATKYFFTQATASMLLLLATTINLLYTGQW--TVTNMINPMASTILTLALTMKLGLSPFHFWVPEVTQGIPLSSGLILLTWQKLAPLCILYIISPNINPDLLLTM-SIMSVMIGGWGGLNQTQLRKIMAYSSIAHMGWMTTILIYNPTLTLLNLTLYIVMTLTMFTLLITTSATTTLTL---SHTWNKTPLIATIMMTILLSLGGLPPLTGFMPKWMILQELTKNNSIILPTLMAITALLNLYFYMRLTYTTSLTMFPTTNTTKIKW-HFKTTKRMTYL-------SPLIITSTMALPLTPILMILH---MN-MIVTLLTNTMLASLLVIIAFWLPQTNMYAEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTENLKTMLPMALILISLLAISLAYEWTQEG--LEWSE-MSIIYMNMFLAFMISLMGLLMYRHHMMSSLLCLEGMMLSLFVMMTITILNSHLTLPNMLPIILLVFAACEAALGLSLLVMVSTTYGTDYVQNLNLLQCMLKIIIPTTMLIPLTWLSKPKMIWINTTMHSLMASMLWL-PLINQLTDNSLNLS-TMYFSDALSTPLLMLTMWLLPLMIIASQFHLSNETTTRKKLYLTMLIMLQVLLIMTFTATELIMFYILFEATLLPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLIALVHMQNITGSLNFLLMQYLLNPLF-TSW-----NNSLLWLACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITILLNP-LTEYMAYPFMMLSMWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIAAVLIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQIILPLAATWWLLASLTNLALPPTINLIGELFVVMSMFSWSNLSLILLGLNITITALYSLYMLITTQRGNYTPHINNIPPSYTRENTLMTMHILPLLLLSINPKIILGMPY------MNLFSSI-TTTSLIILIIPILMT---MLNTQNY-SNYPHYVKTT-VSYSFFLSMIPTTMFIYSGQEMMISNWHWITLHTLKLSLSFKMDFFSMLFMPVALFVTWSILEFSMWYMHSDPNINQFFKYLLTFLTTMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILSMAWFLMNSNTWELQQITLLNPL-APSLPLAGLLLAAVGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNTTIQTLTLCLGAMTTLFTAMCALTQNDIKKIIAFSTSSQLG--LMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLLKTMPFTATAMTVGSLALTGTPFLTGFYSKDLIIETANISYINAWALLMTLIATT-LTAVYSTRIIFFALLGQPRLPSPISINENNPLLLNSIKRLLIGSIFAGFFISKNIPPMTIPPMTMPSYLKFTALTVTLTGFILAMELNLTTLNLK--FKPSTNVFKFSNSLGYFPTIMHRLPPMTNLMFSQKSASLLLDLTWLEILIPKSISLTQLKVSN--MVSTQKGLIKLYFLS---FLITL--SLIPILL------------------ +>Puma_concolor_puma +----MNENLFASFATPT-MMGLPIVILIVMFPSILFPSPN-RLINNRLISLQQWLVQLTSKQMLAIHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLALMN-ITTSVALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIVSMI-MTLFIMFQLKISKYLYPS-NPEPK-STITLKQ-SNP-W-EKKWTKIYSP-LS-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMIFMVWEAFASKREVAMVELTTTNLEWLHGCPPPYHTFEEPTYVLL-K--------MAYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINSPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMGTRPGLYYGQCSEICGSNHSFMPIVLELVPLAYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHYNSTLLLTLGMTTNLLTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGIYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLKYHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPTPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGMYYGSYTFSETWNIGIMLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGITSDSDKIPFHPYYTTKDILGLLALILTLMLLVLFLPDMLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAMIPTLHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASVLYFSTLLILMPISGIIENRLL---KW--------MF--------MINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAVKLFTKEPLRPLTSSMFMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLATLIITQEHMWLIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFLGAFHNPYMPELYTINFTVKTLFLTTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSMPITMASI-P-PQT--MKP-PIFITIMLTVISGTMIVMTTSHWLMVWIGFEMNLLAIIPILMKNYNPR-AMEAATKYFLTQATASMILMMGIIINLLHSGQW--TVSKDLNPLASIMMTTALAMKLGLAPFHFWVPEVTQGVSMSSGLILLTWQKIAPLSILYQISPTINPNLLLTM-SIMSVMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAITMYNPTMMILNLIIYIIMTLTTFMLFMHNSTTTTSSL---SQTWNKTPLITSLILVLMMSLGGLPPLSGFIPKWMIIQELTKNEMIMMPTLLAMTALLNLYFYMRLTYTTALTMFPSNNNMKMKW-RFECTKKMTFM-------PPLIVMSTMLLPLTPMLYILN---MN-VMLALLTNTLLSTLLVLIAFWLPQLNIYAEKVSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLSTMLTMALLLISLLAASLAYEWTQKG--LEWTE-MSMVYINIFLAFTMSLMGLLMYRSHLMSSLLCLEGMMLSLFIMMAVAILNNHFTLASMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTAMLMPMTWLSKPNMIWINSTAYSLLISLISL-SHLNQLGDNSLNFS-LLFFSDSLSAPLLVLTTWLLPLMLVASQSHLSKETLTRKKLYITMLILLQLLLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALLYIQHTLGTLNFLIIQYWAKPIS-TTW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-TTNQMAYPFMMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTILPLMAAWWLLASLANLALPPTINLIGELFVVMASFSWSNMTIILMGTNIIITALYSLYMLITTQRGKYTHHIKNINPSFTRENTLMALHMLPLLLLSLNPKIVLGPIY------MNLFTPF-MLTTMLILLLPIIMS---NTQLYKN-SLYPYYVKTT-VSYAFTISMIPTMMFISSGQEAVISNWHWLSIQTLKLSLSFKMDYFSIIFIPVALFVTWSIMEFSMWYMHSDPCINQFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAILYNRIGDVGFIMAMAWFLTNLNAWDFQQIFIIQHK-NLNIPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQNKTMQTFTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKPMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-LTAAYSTRIMFFVLLGQPRFNALNLINENNTHLINSIKRLLIGSIFAGYLISYNIPPTTIPQMTMPYYLKLTALAVTITGFILALELNLATKNLK--FKYPSNLFKFSSLLGYFPTVMHRLPSKMSLTMSQKSASMLLDTIWLENVLPKSISYFQMKMST--TVSNQKGLVKLYFLS---FMITL--TLSLLLL----------NYHE---- +>Panthera_tigris_tiger +----MNENLFTSFTTPT-MMGLPVVVLIVMFPSILFPSPN-RLINNRLVSLQQWLVQLTLKQMLITHNYKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPVPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGAALALTN-ISAPTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISMI-MTLFVMFQLKISKHLYPS-SPEPK-STAALKQ-PSP-W-EKKWTKIYSP-LL-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKVHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTISSMGSFISLTAVMLMVFMMWEAFASKREVATVELTTTNLEWLHGCPPPYHTFEEPAYVLL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTQELKPGELRLLEVDNRVVLPMEVTIRMLVSSEDVLHSWAIPSLGLKTDAIPGRLNQTTLMGTRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHYNSMLLLTLGMTTNLLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLKYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYMHVGRGMYYGSYTFSKTWNIGIVLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIVSALAAVHLLFLHETGSNNPSGMVSDSDKIPFHPYYTIKDILGLLVLILTLTLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILATIPALHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIAIGQLASILYFFILLVLIPISGIIENRLL---KW--------MF--------MINILSLIIPILFAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAMKLFTKEPLRPLTSSTFMFITAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLAALITTQEYIWLIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHNPYMPELYTINFTVKTLILTTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHVSLPIITASI-P-PQT--MKP-PILTIIMLTVISGTMIVMTTSHWLMVWIGFEMNLLAIIPILMKKYNPR-AMEAATKYFLTQATASMLLMMGIIINLLHSGQW--TVSKDLNPMASIMMTTALAVKLGLAPFHFWVPEVTQGISLSSGLILLTWQKIAPLSILYQISPTINPNLLLAM-AIMSVMIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMMYSPTMMILNLTIYIIMTLTTFMLLMYNSTTTTLSL---SQTWNKTPLITSLILLLMMSLGGLPPLSGFIPKWMIIQKLTKNEMIMMPTLLAMTALLNLYFYMRLTYTTALTMFPSNNCMKMKW-RFKCTKKMIFL-------PPLIVMSTMLLPLTPMLSVLD---MN-MMLALLTNTLLSTLLVLIAFWLPQLNTYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLSTMLITALLLISLLAASLAYEWTQKG--LEWTE-MSMVYVNIFLAFIVSLMGLLMYRSHLMSSLLCLEGMMLSLFIMMTMAVLNNHFTLASMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIIPTAMLMPMTWLSKPSMIWINSTTYSFLISLVSL-SYLNQLGDNSLNLS-LLFFSDSLSAPLLVLTTWLLPLMLMASQSHLSKETLARKKLYITMLIILQLLLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNTTGTLNFLIIQYWAKPIS-ATW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-TTNQMAYPFMMLSLWGMIMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERIHSRTMILARGLQTILPLMAAWWLLASLANLALPPTINLIAELFVVVASFSWSNMTITLMGTNIIITALYTLYMLITTQRGKYTHHIKNINPSFTRENALMTLHLLPLFLLSLNPKIVLGPIY------MNLLTSS-MLTAMFILLLPIITS---NTQLYKS-NLYPHYVKTT-ISYAFTISMIPAMMFISSGQEMTISNWCWLSIQTLKLSLSFKLDYFSIIFIPVALFVTWSIMEFSMWYMHTDPYINQFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFIMAMAWFLTNLNAWNLQQIFITQHE-SLNMPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMEQNKAMQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKPMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLVTLIATS-LTAAYSTRIMFFALLGQPRFNSLSPINENNPHLINSIKRLLIGSIFAGYLISHNIPPTTIPQMTMPCHLKLTALAMTIMGFILALELNLVAKNLK--FKYPSNLFKFSNLLGYFPIVIHRLPSMMSLTMSQKSASMLLDMIWLENVMPKSISHFQMKMST--AVSNQKGLVKLYFLS---FMITL--TLSLLLL----------SFHE---- +>Megaladapis_edwardsi_ +----MNENLFTSFITPT-IMGMPIIILIIMIPSILFPTPT-RLINNRLTSIQQWVIQLTLKQLMMNHSTKGRTWSLMLVSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAAAVITGFRHKMKMSLAHFLPQGTPTPLIPMLVVIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTS-ISPATAPITFITLTLLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWLITILSMI-LTLLIVLQLKILKFNYPL-NPTLK-VMNKHLY-ASP-W-EMKWTKIYSP-LS-LPQQS---MFINRWFYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRTELGQPGALMGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLTSSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTVINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFLIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSIGSFISLTAVMLMIFMIWEAFASKREILAVELTTTNLEWLHGCPPPYHTFEEPTYVKV----------MAHPIQLGFQDAASPIMEELLYFHDHTLMIMFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEITTPSLTLKTMGHQWYWSYEYTDYENLCFDSYMIPSSDLKPGELRLLEVDNRVVLPTEMSIRMLISSEDVLHSWAVPSLGVKTDAIPGRLNQTTLTTSRPGIYYGQCSEICGANHSFMPIVLELVPLKYFEDWLLSML----------MTHQTHSYHMVNPSPWPLTGALSALLMTSGLAMWFHFNSTTLLMLGLATNTLTMFQWWRDIVREGTFQGHHTSTVQKGLRYGMILFIISEIFFFAGFFWAFYHSSLAPTPELGGCWPPVGIYPLNPLEVPLLNTAVLLASGVSITWAHHSLMEGNRTHVLQALFITITLGIYFTLLQASEYFETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKNHPLLKIMNNSFIDLPTPSNISSWWNFGSLLGACLALQIITGLFLAMHYTADTTTAFSSIIHICRDVNYGWIIRYLHSNGASMFFLCLFIHIGRGLYYGSHTLSETWNIGIILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAMVHLLFLHETGSNNPMGIPSNSDKIPFHPYYTIKDLLGLMLLMLLLMTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIVPLLQTAKQQSLMFRPISQFMFWVLVADLITLTWIGGQPVEHPYITIGQVASILYFSLILIIMPATSLLENKML---KW--------MF--------MINLLLLVIPILLAMAFLTLTERKILGYMQLRKGPNVVGPHGILQPFADAMKLFIKEPLQPLTSSTLLYIISPALALSIALAMWIPLPFPHPLINMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMSGSYTLSTLITTQEYLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNTLTTTIFLGTMYKPNTPEMYTSTFATKTLILVVLFLWIRTSYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPVLTSCI-P-PQM--MKP-TILVPIMLTIFTGTALTMISSHWMLIWMGLEINMLAIIPIFMMKNNSR-STEASTKYFLTQATASMLLMCAIIVNSVYSGQW--NITNTYSQLTSLVITIALTMKLGMAPFHFWVPEVTQGISLMSGMLLLTWQKLAPMFIMLQIYPSMNPHILLTI-ALLSTLMGGWGGLNQTQLRKLLAYSSIAHMGWMMIILMYCPTLTTLNLMIYLMLTIALFMMLNLNSNTTTLTL---SNLWNKTPVIILMILISLLSLGGLPPLTGFLPKWTIVQELTKNNXTIMATTMTIMALLNLYFYMRLIYSTSLTMFPTFNNSKMNW-KLQPTKAMPLL-------PPLIILSTLSIPLSPALLTLN---MN-LLVTLTTNTTLTLLLVTMAFWLPQLNIYTDKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTSPKLTLMVALTLISILAAGLAYEWLQKG--LEWVE-MPSTSINIILAFITALLGMLVFRSHLMSSLLCLEGMMLSMFVLATLIILNLHFTASFIMPILLLVFAACEAAVGLALLVTVSNTYGLDYIQNLNLLKCMLKIIIPTIMLFPVTWYSNNPMIWINTTSYSLMISTTGL-LLLNQSNDNNNNFS-LTFFSDPLSSSLTILTMWLLPLMILASQHHLKKESWTRKKLYISMLISLQMFLIVTFTATELILFYIMFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLTGSLPLLVALLYIQNSLGSLNFLTMSMWSQELP-NYW-----SSSLMWIACIMAFMIKMPLYGFHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRITLILNP-LTKYMAYPFLMLCLWGMIMTS--SICLRQTDLKSLIAYSSVGHMALVIAAILIQTPWSFMGATILMIAHGLTSSMLFCLANSNYERTHSRTMLLARGIQSLLPLAATWWMLASMANLALPPSINLIGELMVIMASFSWSNITIALTGLNMLITALYSLYMLITTQRGKLTYHTHNINPSFTRENTLMSMHMIPLLLLTLNPKIILGPTY------MNLFSSF-TLITLIILTLPIVTN---MMNTHKN-HYYAYYVQSS-IAYAFTTSLIPSTLFIFSGQEMIISNWHWMTIQTMKLTLSFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNINQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILTMAWFLMYSNTWDLQQLFILNYD-PNLIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLMENKKIIMSMALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMMVTIGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLFKAMPFTSSSLIIGSMALTGMPFLTGFYSKDYIIESASTSNTNAWALTITLIATS-MTAIYSTRIIFYTLLNQPRFPTLTYINENNPLLINSIKRLMFGSLFAGFFMYNNIPPMNIPQLTMPLYLKITALAVTIMGFMLAMELNLLTSNLK--LKMTSHMFKFSNSLGFYPAILHRLTPQFKLSMDQNTASLLLDLAWLEKTMPKSTTHIQMLSST--IVSNQKGLIKLYFLS---FLASI--ILTLLLIM----------------- +>Lagothrix_lagotricha_brown_woolly_monkey +----MNQNLFASFNMPV-ILGIPLITLIILFPTMLIMPSN-KLINNRFSSLQQWLIQLTLKQMMLTHSTKGRTWSLMLLALITFIALNNLLGLTPYAFTPTTQLSMNLGMAIPLWLATVLMGLRFKTKTSLAHFLPQGTPIPLIPMLIIIETISLFIQPIALAVRLTANITAGHLLMHLLGDTTLTLMS-IYLSSSVITVIIIILLITLELGVALIQAYVFTLLVSLYLHNNSMPQLDMSPWPMVILSMV-ATLFYIIQLKMLNFTFHI-TPSSK-LIQTQKH-KTT-W-ELKWTKIYLP-PS-TYQ-----MFMNRWLFSTNHKDIGTLYLLFGAWAGAVGTALSLLIRAELGQPGSLMEDDHVYNVIVTSHAFIMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASSTLEAGAGTGWTVYPPLAGNMSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIVTYYSNKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLNHTYAKIHFTVMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIISSVGSFISLTAVILMIFMIWEAFSSKRKVLAIEQLTTNLEWLYGCPPLYHTFEESTYVKALSEK------MAHPAQLGLQNATSPIMEELIAFHDHALMIIFLISSLVLYIISLMLTTKLTHTSTMNAQEIEMVWTILPAIILIMIALPSLRILYMTDEFNKPYLTLKAIGHQWYWSYEYSDYVDLAFDSYITPTYFLEPGEFRLLEVDNRTTLPMEADIRMLISSQDVLHSWAVPSLGVKTDAIPGRLNQAMLASMRPGLFYGQCSEICGSNHSFMPIVLEFIYFQDFEVWASYLYIV--------MTHQTHAYHMVNPSPWPLTGALSAFLLTSGLIMWFHFYHSLLLATGLLASAMTMFQWWRDVVRESTYQGHHTIPVQKGLRYGMVLFIISEVFFFAGFFWAFYHSSLAPTPQTGGHWPPTGIFPLNPMEVPLLNTAILLASGVTITWAHHSLMEANREESTQALAMTIALGIYFTCLQMSEYSEASFTISDGIYGSTFFVATGFHGLHVIIGTTFLITCLIRQQLYHFTTSHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS--MTTPRKTHPLAKIINNSLIDLPSPSNISAWWNFGSLLGICLIIQIATGLFLAMHYTPDTSTAFSSVAHIARDVNYGWMIRYLHANGASMFFICLFLHVGRGLYYGSFLSLETWNVGIILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSSLVEWIWGGFSVDKATLTRFFTFHFILPFIIAALATIHLLFLHDTGSSNPSGMTSDPDKITFHPYYTIKDIFGLILLLLCLMNLTLFSPDLLTDPDNYTLANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVAFPTLHLSKQQSMKFRPIAQILFWALVADLITLTWIGGQPVEYPFVTIGQTASVMYFLIIITLIPLSTLIENKLL---KW--------MF--------MLNLLLLVIPALIAMAFLTLMERKILGYMQFRKGPNIVGPYGMLQPIADAMKLFTKEPLLPTTSATTLYMIAPTLALSIALLLWSPLPMPHPLINFNLGLLFMLATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLHSLITTQEHSWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNIEYAAGSFALFFMAEYMNIIMMNALTTTIFLATPYNMTTSELYTMSFMIKTLLLTSLFLWIRTAYPRFRYDQLMHLLWKNFLPLTLALCMWYISMPALTSGI-P-PQT--MNP-LAYLIISFTIMMGTMITVLSSHWFLIWMGLELNMLAIVPMLIKNTSPR-STEAATKYFLTQATASMLLLMAICLNNLLSGQW--TINPSLNQVLATMMMIALMMKLGMAPLHFWLPEVTQGTPLIPAMLILTWQKLAPLSIMLQIFPSINIYVLLMA-SILSIMVGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYNPSITTLTLLIYIFLTISTFMTFYLNSNMTTLSL---SHTWNKITWMMPMIPLMMMSLGGLPPLTGFSPKFAIMQELTKNNNLIMPLTMALLTLINLYFYMRLTYAISMTMFPTSNNTKINW-QLKHMKPAPLL-------PPLMVSSILLLPMTPLMLMA----MN-LMLTLTTNILLALVLITITFWLPQLNIYTEKFNPYECGFDPTTSARLPFSMKFFLIAITFLLFDLEIALLLPLPWATQTNNLMLTINMILALIVILAVGLAYEWTQKG--LDWIE-MPFIYINATLAYFMSLLGLLIYRSHLMSSLLCLEGMMLSLFIMTTLTTLSMHFTLMCMMPITLLVFAACEAAVGLALLVLISNLYGLDYVQNLNLLQCMLKIIMPTIMLLPTMWLSKNHMMWINMMTCSLLISAITP-LLLYMPN-NLSNLS-LTSFSDPLTSPLLTLTVWLLPLMILATQQHLYNNPLMRKKLYISMLIILQISLIMTFTATELFLFYILFETTLIPTLIIITRWGYQPERLNAGSYFLFYTLAGSLPLLITLLYYLSNLGSLNML-IMTNTKEIL-FSW-----TNNITWLGCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITPILGP-LTEKMSYPFLILSLWGMAMTS--CICLRQADLKSLIAYSSVSHMALVILAILIQTPWSLTGATIIMIAHGLTSSLLFCLANSNYERIHSRAMMFTRGLQTLFPLLALWWLLANLANLALPPTINLMGELFTILASFSWSNFTIMFTGFNMLITALYSLHMFTSTQRGPLTYSTSNVKPSFQRENKLMFMHMTPMLLLTMNPKAIMGLTP--------MLSSM-TLMMLIPLMVPIMIT---LIKPNKN-PLYPHYVKLT-ITYAFTISIVTMTMFIFTGQESMISNWHWMTIQTIKLSLNFKLDFFSMMFTPVALFVTWSIVEFSTWYMSSDPNINQFLKYLLIFLITMLILITANNLFQLFIGWEGMGIMSFLLISWWHGRTDANTAALQAILYNRIGDIGFILAMAWFFLHSNSWDLQQMFILNPN-PDSFPLISLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLMIRFYPLIENNTLIQTLTLSLGAMTSLFTAICALTQNDMKKIVAFSTSSQLG--LMMVTVGINQPHLAFLHICTHAFFKAMLFLCAGSIIHSLNNEQDIRKMGGLFKTLPFTASSLIIGSLALMGMPFLTGFYSKDLIIETANTSYTNAWALTITLLATS-LTAMYSMRIIFFALTGYPRFTPLASINENNPSLINPINRLAIGSIFAGFLISTCVPPTSYPQITMPHYLKLAALSVTILGLLVAMELNLMTNNMK--LSTPTKSFYFSNMLGFYSTTTHRSNPHSSLTASQNFTSTLLDLFWLEKSMPKMTTQTQVSIST--TTSAQKGLIKLYFLS---FFIPP--TMALLLTI----------------- +>Panthera_onca_jaguar +----MNENLFTSFTTPT-MMGLPIVMLIIMFPSILFPSPS-RLINNRLISLQQWLVQLTSKQMLAIHNHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRHKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGAALALMN-ISTSIALITFIILILLTVLEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIVSMI-MTLFIMFQLKISKHLYPS-SPEPK-SMAALKQ-LNP-W-EKKWTKIYSP-LS-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLSIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLSVWSVLITAVLLLLSLPVLAAGITMLLTDRNPNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISRIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNTISSMGSFISLTAVMLMVFMVWEAFASKREVAMVELTTTNLEWLHGCPPPYHTFEEPTYVLL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINSPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTQELKPGELRLLAVDNRVVLPMEVTIRVLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMGTRPGLYYGQCSEICGSNHSFMPIVLELVPLSYFEKWSASVL----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHYNSTLLLTLGMTTNLLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGSRKHMLQALFITISLGVYFTLLQASEYYETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLKYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYMHVGRGMYYGSYTFSETWNIGIVLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGVVSDSDKIPFHPYYTIKDILGLLVLILMLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILTLAIIPALHTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFSILLILMPISGIIENRLL---KW--------MF--------MVNILSLTIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAMKLFTKEPLRPLTSSMFMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLATLITTQEFIWLVIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHSPYMPELYTTNFTMKTLILTTTFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPIITASI-P-PQT--MKP-PIFIIIMSTVISGTMIVMTASHWLMVWIGLEMNLLAIIPILMKKYNPR-AMEAATKYFLTQATASMLLMMGIIINLLHSGQW--TVSKDLNPMASIMMTTALAMKLGLAPFHFWVPEVTQGISMSSGLILLTWQKIAPLSILYQISPTINPNLLLTM-AIMSVMVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIMTYSPTMMILNLTIYIIMTLTTFMLFMHNSTTTTSSL---SQTWNKTPLITSFILVLMMSLGGLPPLSGFIPKWMIIQELTKNEMIMMPTLLAMTALLNLYFYMRLTYTTALTMFPSNNCMKMKW-RFGCTEKTILLP-----PPPLIVMSTMLLPLAPMLSILD---MN-VMLALLTNTLLSMLLVFIAFWLPQLNTYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNKLSTMLTMALLLISLLAASLAYEWTQKG--LEWTE-MSMVYINIFLAFIMSLMGLLMYRSHLMSSLLCLEGMMLSLFIMMTVAILNNHFTLASMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIVPTAMLMPMTWLSKPNMIWINSTTYSLLISLISL-SYLNQLGDNSLNLS-LLFFSDSLSAPLLVLTTWLLPLTLMASQSHLSKETLARKKLYITMLIILQLLLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLLGSLPLLVALLYIQNTTGTLNFLIIQYWAKPIS-ATW-----SNILLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-TTNQMAYPFMMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYTGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTILPLMAAWWLLASLANLALPPTINLIGELFVVVASFSWSNLTITLMGTNIIITALYTLYMLITTQRGKYPHHIKNINPSFTRENALMALHLLPLLLLSLNPKIVLGPI-------MNLFTSF-MLTAMFILLLPIITS---NTQLYKN-NLYPHYVKTT-ISYAFTISMIPAMVFISSGQETIISNWHWLSIQTLKLSLSFKLDYFSIIFIPVALFVTWSIMEFSMWYMHTDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFITAMAWFLTNMNAWDFQQIFITQHE-NLNIPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEQNKTTQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKPMPFTTTSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLVTLIATS-LTAAYSTRIMFFALLGQPRFNSLSPINENNPHLINSIKRLLIGSIFAGYLISHNIPPTTIPQMTMPHYLKLTALAATITGFILALELNLAAKNLK--FKHPSDLFKFSNLLGYFPIVMHRLPSTMSLTMSQKSASMLLDMIWLENVLPKSISYFQMKMST--IVSNQKGLVKLYFLS---FMITL--ALSLLLL----------SFHE---- +>Panthera_pardus_leopard +----MNENLFTSFTTPT-MMGLPIVVLIIMFPSILFPSPN-RLINNRLVSLQQWLVQLTSKQMLAIHSHKGQTWALMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGAVVTGFRYKTKASLAHFLPQGTPIPLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGGAALVLMN-ISASIALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNTMPQLDTSTWFITIISMI-MTLFIMFQLKISKYSYPS-SPEPK-STATLKQ-PNP-W-EKKWTKIYSP-LS-LPQQ----MFMNRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDNTWAKIHFTIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMVFMVWEAFASKREVAMVELTTTNLEWLHGCPPPYHTFEEPTYVLL-K--------MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINSPSLTVKTMGHQWYWSYEYTDSEDLSFDSYMIPTQELKPGELRLLEVDNRVVLPMEVTIRVLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMGTRPGLYYGQCSEICGSNHSFMPIVLELVPLAYFEKWSASML----------MTHQTHAYHMVNPSPWPLTGALSALLMTSGLAMWFHHNSMLLLTLGMTTNLLTMYQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITISLGVYFTLLQASEYYETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFLRQLKYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS--MTNIRKSHPLIKIINHSFIDLPAPSNISTWWNFGSLLGVCLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYLHANGASMFFICLYMHVGRGVYYGSYTFSETWNIGVVLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGIDLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGMVSDSDKIPFHPYYTIKDILGLLVLILALMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAVIPALHTSKQRGMMFRPLSQCLFWFLVADLLALTWIGGQPVEHPFITIGQLASILYFSILLVLMPISGIIENRLL---KW--------MF--------MINILSLIVPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAMKLFTKEPLRPLTSSMFMFIMAPILALTLALTMWIPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLATLITTQEYIWLIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIIMMNILTTILFFGAFHSPYMPELYTTNFTVKTLILTTTFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHVSLPIITASI-P-PQT--MKP-PIFITIMLTVISGTMIVMTTSHWLMVWIGFEMNLLAVIPILMKKYNPR-ATEAATKYFLTQATASMLLMMGIIINLLHSGQW--TVSKDLNPMASIMMTIALAMKLGLAPFHFWVPEVTQGISMSSGLILLTWQKIAPLSILYQISPTINPSLLLTM-AIMSVMVGGWGGLNQTQLRKIMAYSSIAHMGWMAAIMMYSPTMMILNLTIYIIMTLTTFMLFMHNSTTTTSSL---SQTWNKTPLITSFILVLMMSLGGLPPLSGFIPKWMIIQGLTKNEMIMMPTLLAMTALLNLYFYMRLTYTTALTMFPSNNCMKMKW-RFECTEKTTFL-------PPLIVMSTMLLPLAPMLSILD---MN-VMLALLTNTLLSTLLVFIAFWLPQLNIYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIVLLLPLPWASQTNKLSTMLITALLLISLLAVSLAYEWTQKG--LEWTE-MSMVYVNMFLAFIMSLMGLLMYRSHLMSSLLCLEGMMLSLFIMMTVTILNNHFTLANMTPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQCMLKIIVPTAMLMPMTWLSKPNMIWINSTTYSLLISLISL-SYLNQLGDNSLNLS-LLFFSDSLSAPLLVLTTWLLPLMLMASQSHLSKETPSRKKLYITMLIILQLLLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLMGSLPLLVALLYIQNTTGTLNFLVIQYWAKPIS-ATW-----SNIFLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITILLNP-TTNQMAYPFMMLSLWGMVMTS--SICLRQTDLKSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERVHSRTMILARGLQTILPLMAAWWLLASLANLALPPTINLIGELFVVVASFSWSNMTIVLMGTNIIITALYTLYMLTTTQRGKYTHHIKNINPSFTRENALMALHLLPLLLLSLNPKIVLGPI-------MNLFIFF-MLTAMFILLLPIIMS---NTQLYKN-NLYPHYVKTT-ISYAFTISMIPAMMFVSSGQETIVSNWHWLSIQTLKLSLSFKLDYFSIIFIPVALFVTWSIMEFSMWYMHTDPYINRFFKYLLMFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDVGFITAMAWFLANMNAWDFQQIFITQHE-NLNIPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMEHNKTMQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG--LMIVTIGVNQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKPMPFTTSSLIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLVTLIATS-LTAAYSTRIMFFALLGQPRFNSLSPINENNPHLINSIKRLLIGSIFAGYLISHNIPPTTIPQMTMPHYLKLTALAVTITGFILALELNLAAKNLK--FKYPSNLFKFSNLLGYFPIVMHRLPSTMSLTMSQKSASMLLDMIWLENVLPKSISHFQMKMST--TVSNQKGLVKLYFLS---FMITL--TLSLLLL----------SFHE---- diff --git a/src/TEST/Real_Test.fa b/src/TEST/Real_Test.fa new file mode 100644 index 0000000..de08c5b --- /dev/null +++ b/src/TEST/Real_Test.fa @@ -0,0 +1,1476 @@ +>Apodemus_agrarius_NC_016428 +------------ATGAACGAAAATCTATTTGCCTCTTTTATCACTCCCTCA---GTAATAGGACTCCCAATTGTAATTACTATTATCATATTTCCATCTATCCTATTCCCATCATCAGAA---CGTTTAATTAGTAATCGACTTCACTCATTTCAACACTGATTAATCAAACTTATTATCAAACAAATAATACTTATTCACACACCAAAAGGACGGACTTGAACTCTAATAATTGTCTCCCTTATTATATTCATCGGCTCAACTAACCTTCTAGGCCTTCTTCCACACACATTTACACCGACTACTCAACTATCAATAAATCTTAGTATAGCAATCCCACTATGAGCAGGAGCAGTCCTATTAGGGTTTCGCCATAAATTAAAAAGCTCCTTAGCTCATTTCCTTCCACAAGGCACCCCTATTTCACTTATTCCTATACTTATTATTATCGAAACAATTAGTCTATTTATCCAACCTATAGCTCTAGCAGTACGATTAACAGCCAATATTACCGCAGGACATCTACTTATGCATCTAATTGGAGGAGCAACCCTAGTCCTTATAAAT---ATTAGCCCACCCACCGCTACTATTACATTCATTATCTTACTCCTTCTCACAGTACTAGAGTTTGCTGTAGCCCTAATTCAAGCATACGTATTTACTCTTCTAGTAAGCCTATATCTACATGATAACACA +>Hyemoschus_aquaticus_isolate_GLC16_NC_020714 +------------TAATGAACCAAAATTTATTTGCCTCTTTCATTACCCCAA---CCATAATAGGCCTCCCCATTGTCATCCTGATCATCACATTTCCAAGTATCTTATTCCCAACCCCTA---ATCGCTTGACCAACAATCGTTTGGTTTCACTTCAACAATGGTTAGTTCAACTCACAACGAAACAAATATTAAGTATGCACAACAAAAAGGGGCAAACATGGGCACTAATACTTGTATCTCTTATTATATTTATTGGATCTACCAATTTATTAGGTCTCCTGCCACACTCATTTACACCCACCACACAACTATCCATGAATCTAGGAATAGCAATCCCCTTATGGGCAGGTACTGTAATTACGGGTTTCCGCAACAAAACTAAAAATTCTTTAGCCCACTTTTTACCCCAAGGAACACCAACCCTTCTAATTCCCATACTTATCATCATTGAAACAATCAGCCTTTTTATTCAACCAGTTGCTCTAGCCGTACGACTAACAGCAAACATCACAGCGGGCCATCTACTCATGCACCTGATTGGAAGCGCCACTCTAGCTCTACTAA---ACATCAGTACTACCACAGCCCTCATCACATTTATCATTTTAATTTTACTAACAATGCTTGAATTTGCTGTAGCCATGATTCAAGCCTACGTTTTCACCCTACTAGTGAGCCTATACTTACATGACAATT +>Macaca_thibetana_NC_011519 +------------AATGAACGAAAACCTGTTTACCTCTTTCTCAACCCCAAC---AATCCTAAATCAACCCGCCACAATTCCCATCATCCTACTCCCCACCCTACTAATCTTAACCTCCAA---ACATCCCGCTAATAATCGACTAGCCACCATTCAACAAAACCTGATCCAACTCGCCCTAAAACAAATAATAGCAACTCACAACGCTAAAGGACAAACCTGATCTCTAATACTAATATCTCTAGTCACCTTTATTGCCATAACAAACCTCCTAGGACTTCTGCCTTACTCGTTCACACCAACCACCCAACTTTCCATAAACCTAGCCATAGCAATCCCCCTATGGGCGGGCACAGTAATACTAGGGTTTCGCTTTAAAGCCAAAAACTCCCTAGCCCATCTCCTACCACAAGGCACACCCACACCCCTCATCCCCATATTAGTAGTAGTCGAAACTATAAGCCTACTTATTCAACCAATAGCCCTGGCCGTACGACTAACCGCAAACATCACAGCCGGCCATCTACTAATACACCTGGTTGGAAATGCCGTACTAGCACTATCAAC---CACCAACTTCCCCATGACCCTGCTAACTTCTACACTTCTAGTACTACTAACTGCTCTAGAAATTGCAGTAGCCCTGATCCAAGCCTATGTCTTCACACTCTTAATTAGCCTTTATCTACGTAACAACAC +>Saguinus_oedipus_NC_021960 +------------ATGAACCAAAATCTATTTACCTCCTTCAACATTCCAGTA---ATCCTAGGAATCCCCCTAGCAGTTCTAATTATCATATTCCCCACTATATTGATTATTCCCCCTAAA---AACTTAATCAACAACCGACTCTCCTCTATTCAACAATGGCTAGTTCAGCTTACTCTAAAACAAATAATAACAAGCCATACTCCTAAGGGGCGAACCTGATCTCTCATACTTCTATCCCTAATTACATTCATTGCCCTAAACAATATTCTTGGACTCACACCCTATGCATTCACACCAACTACTCAACTATCAATAAACCTAGGCATAGCAATCCCCCTATGAGCGGCAACCGTACTTATAGGCCTTCGATTTAAAACAAAGTCATCCCTCGCCCACTTCTTACCGCAAGGAACCCCTATCCCACTTATCCCAATATTAATTATTATTGAAACAATTAGCCTGGTCATTCAACCAGTAGCTTTAGCCGTACGATTAACAGCCAATATCACAGCAGGGCACCTACTAATACACTTACTTGGGGACACCGCACTAACCCTCATGTCT---ATCTACCTCTCTTCCTCCACAATCACCATTATTATCATTATCCTGCTAATCACTCTAGAACTAGGCGTAGCCCTCATCCAAGCTTATGTATTTACCCTACTAGTGGGCCTTTATCTACACGATAACTCT +>Feresa_attenuata_NC_019588 +------------TAATGAACGAAAATCTATTTGCCCCTTTCATAATCCCGA---TTATACTAGGCATTCCCATTACCACTCTAATTATTATATTTCCCACCATACTATTCCCAACACCAA---GCCGATTAATCAATAACCGTATAATCACTATCCAACAATGACTTACCAAACTCACATCAAAACAACTGATAACTACACATAACCCCAAAGGACAAACCTGATCTCTAATACTCATCTCACTTTTCCTTTTCATTGCCTCCACAAACCTTCTTGGAATGTTACCTCACTCATTCACACCTACTACTCAACTCTCTATAAACTTAGGCATAGCCATTCCATTATGAGCTGGTACCGTCTTTATCGGTTTCCGTAATAAGACAAAAATATCTCTAGCCCACCTTTTACCATTAGGCACACCCACTTTCCTAATTCCTATGCTGGTAATAATCGAAACTATCAGCCTATTTATTCAACCCTTAGCCCTAGCAGTACGACTAACAGCGAACATCACAGCAGGTCACCTATTACTACACCTAATTGGAAGTGCAACCCTAGCATTAATTA---GCATTAACCTATTCACAGCTCTCATCACATTTATTATCCTCACTCTATTAATCATCCTCGAATTCGCTGTAGCCCTAATCCAAGCCTACGTATTTACCCTACTGGTAAGCCTATACTTGCAAGACAATA +>Episoriculus_caudatus_NC_026131 +------------AATGAACGAAAATTTATTCGCCTCTTTCGCTACCCCAAC---AATAATAGGTCTACCTATTGTAATATTAATTATCTTATTCCCTAGCATCCTATTTCCAAACCCCAC---TCGACTAATTAACAACCGTTTAGTGGCCCTACAACAATGATTAATTCAACTGATTTCAAAACAAATAATAGCAATTCACAACCAAAAGGGACAGACATGAACCCTAATATTAATTTCACTAATTCTCTTTATTGGCTCAACTAATCTTTTAGGACTACTACCACATTCATTTACACCTACAACCCAACTTTCAATAAACCTAGGAATAGCAATTCCACTTTGAGCTGGTGCAGTAATTACAGGATTCCGACACAAAACTAAAGCTTCTTTAGCACACTTCCTTCCCCAAGGAACCCCTCTTCCTCTCATCCCAATATTAATTATCATCGAAACAATTAGCTTATTCATTCAACCAATGGCCCTCGCTGTACGACTAACAGCCAACATTACTGCAGGCCACCTGCTTATTCACCTTATCGGAGGGGCAACTCTCGTTCTCATAAG---CATTAGTCCTGTAACAGCTTTTATTACTTTTATTATTCTTGTCATATTAACAATCCTTGAATTTGCTGTAGCACTAATTCAAGCTTACGTCTTTACCCTTCTAGTAAGCCTATATCTGCACGATAATAC +>Melogale_moschata_voucher_YP6128_NC_020644 +------------ATGAACGAAAATTTATTTTCCTCTTTCATTACCCCTACA---ATAATGGGAATTCCCATTGTCATCGCTATCGTCATATTCCCAAGTATCATATTTCCCTCACCTAAC---CGATTAATCAACAATCGACTCGTCTCCATCCAACAATGACTAGTTCAACTAACATCAAAACAGATACTGTCCATCCACAATCAAAAGGGACAAACCTGGGCACTAATACTGATATCCCTAATTATATTCATTGGCTCTACTAACCTATTAGGTCTCCTACCCCACTCATTTACCCCCACCACACAATTATCCCTAAACCTCGGAATAGCTATCCCCCTATGAGCAGGTACAGTAGTTATGGGGTTTCGGTATAAGACTAAGGCTTCCCTAGCCCACTTCCTACCACAAGGAACACCCCTCCCTTTAATCCCCATACTCGTAATCATCGAAACCATCAGCCTGTTTATTCAACCTATAGCCCTAGCTGTACGGCTAACCGCTAACATCACTGCAGGTCACCTATTAATTCACTTGATTGGAGGAGCTACCCTAGCCCTAATAAGC---ATTAGTACTATCACGGCAGTAGTGACCTTCGTTATTCTCGTCCTACTAACTATTTTAGAATTTGCAGTAGCCCTTATTCAAGCCTATGTCTTCACCCTACTAGTAAGCTTGTATTTACATGATAACACC +>Callicebus_cupreus_NC_021965 +------------TAATGAACCAAAATCTATTTGCCTCATTCAATATCCCAA---CAATTCTAGGAATCCCCCTAATTACATTAATTATTTTATTTCCCACCCTACTAATAACACCTCCCA---ATAAATTAATCGGCAACCGAATTTCTCTACTTCAACAATGATTAATCCAACTTACATTAAAACAACTAATACTAAATCACAGCACTAAGGGACGAACTTGATCTCTTATACTTCTAACCCTAATTACTTTTATTGCTCTTAACAATCTCCTTGGACTTATACCTTACGCATTTACACCAACCACCCAACTATCTATGAATATTGGAATAGCAATCCCCCTATGAGCGGCCACAGTACTTATAGGGTTTCGATTCAAAACAAAAGCATCTTTAGCCCACTTTTTACCCCAAGGAACCCCTATTTCTCTTATTCCCATACTAGTAATTATTGAAACAATTAGCCTCTTCATTCAACCAATAGCACTAGCCGTACGTTTAACAGCTAATATCACAGCAGGACATCTTCTAGTGCACCTACTTGGAGACACCGCATTAACTCTTATAT---CTATTTATTTCTCCTCATCTATAATTACGGTTATTGTAATTATCCTTCTAATTACCCTAGAATTAGGTGTAGCCTTAATTCAAGCCTACGTCTTCACACTTCTAGTAAGCCTTTACCTACATGATAACT +>Tarsius_lariang_voucher_SM14_NC_024051 +------------AATGAACGAAAATTTATTCGCCTCTTTCATTACCCCTAC---AATAATAGGCCTACCAGTAGTAGTATTAATTATTATATTCCCAACTATACTATACCCAACTTCAAA---CCGCCTAATTAACAATCGACTTATCTCCCTACAACAATGATTGATTCAACTAGTAACTAAACAAATAATGATAATACATAATAATAAAGGTCAAACTTGGTCACTAATACTAATTTCCCTTATTCTTTTTATTGGGTCTACAAACCTATTAGGCCTACTACCCCATTCTTTCACACCCACCACTCAACTATCAATGAACCTAGGAATAGCCATCCCTCTATGGGCCGGAGCAGTAATTACTGGCTTCCGTCACAAAACTAAGGCATCCCTAGCCCATTTCCTCCCACAAGGAACTCCAATTCCACTAATTCCCATACTAATTATCATTGAGACTATTAGCCTCTTTATTCAACCAATAGCTTTAGCCGTCCGACTAACTGCTAACATTACAGCAGGTCATTTACTTATACATTTAATCGGAGGAGCAACCCTAATTCTATCATC---AATTAGCTCCATTGCAGCATCAACTACATTTATTATTCTCATCCTACTCACTATCCTCGAAATAGCAGTAGCCCTTATCCAAGCCTACGTTTTTACACTTCTAGTAAGTCTTTACCTACATGATAATAC +>Rhinolophus_pumilus_NC_005434 +------------ATGAACGAAAATCTATTCGCCTCTTTCATTACCCCAACG---ATAATGGGCCTTCCCATTGTTATCTTAATTATTATATTTCCCACAATTCTCTTCCCCTCAACAAAC---CGACTAATCAGTAACCGCCTAGTCGCCATCCAACAATGATTAATTCATTTAACATCAAAACAAATAATAGCCATCCACAACCCTAAAGGCCAAACCTGGACACTAATGCTCATATCTCTTATCCTATTTATTGGTTCAACAAACCTTCTAGGACTTCTACCCCATTCCTTCACGCCAACCACACAACTATCTATAAACCTGGGCATGGCTATCCCTCTATGAGCAGGAACTGTCATTCTAGGCTTCCGCCACAAGACAAAAGCTTCCCTAGCCCATTTCCTGCCACAAGGAACCCCTCTCCCCCTAATCCCTATACTGGTAATCATTGAAACTATTAGTCTATTTATTCAACCCATAGCCCTGGCCGTGCGGCTAACGGCCAACATTACTGCCGGACATCTTTTAATTCACCTAATTGGAGGCGCCACACTAGCTCTACTAAGC---ATCAGTACGGCTACCGCCTTCATCACATTCATCATTCTAGTACTGCTGACAATCCTAGAATTCGCTGTCGCCCTAATCCAGGCCTATGTATTCACACTACTGGTTAGCCTCTACCTACACGACAATACC +>Lepilemur_hubbardorum_NC_014453 +------------TAGTGAACCAAAATTTATTCTCCTCTTTTATTACCCCAA---CAATCGTAGGAATCCCTGTCGTTATTCTCATCATCTTAGCCCCCAGTATTTTCTTCCCCTCCCCCT---CCCGACTTATTGATAACCGCCTCACCTCCCTACAACAGTGACTGGTCCAACTAATGCTAAAACAACTAATAGCTACACACAACACTAAAGGACGAACCTGAGCTCTCATGTTAATTTCACTAATTCTGTTTATTAGCTCAACTAACCTACTAGGCTTATTACCCCACTCGTTTACCCCAACCCACACAACTTCAATAAACCTAGCTATAGCAATCCCCCTATGGGCAGCTACAATTATTACGGGTTTCCGTTACAAAATAAAAGCATCCCTAGCCCACCTCCTACCACAAGGAACGCCTACCCCACTCATTCCTATATTAATTATCATTGAAACTATTAGCCTTCTCATCCAACCCATAGCACTAGCCGTGCGACTAACAGCCAACATTACGGCAGGCCACCTACTCATACACCTAATTGGAGGGACCACCCTAGCATTAACCT---CAATCAACCCTAACATCTCCCTAATCACGTTTATTATTCTTGTTTTGCTTACAGTCCTTGAGTTAGCCGTCGCCTTAATTCAGGCCTATGTATTTACCCTATTAGTAAGCCTTTACCTACATGATAACA +>Sus_scrofa_domesticus_NC_012095 +------------AATGAACGAAAATCTATTTGCCTCTTTTATTGCCCCCAC---GATAATAGGACTACCTATTGTCACCTTAATTATTATATTCCCAAGCTTACTATTCCCAACACCCAA---ACGACTCATTAATAACCGCACAATCTCGATCCAACAATGATTAATCCAACTAACATCCAAACAAATAATAGCTATTCACAACCAAAAAGGCCAAACCTGATCACTAATACTTATATCTCTAATTATATTCATCGGCTCAACAAACATCCTAGGCCTACTACCACACTCATTCACACCCACCACACAACTATCAATAAACCTGGGTATAGCAATCCCCCTATGATCAGCAACCGTATTCACAGGATTCCGCTATAAAACCAAAACATCACTAGCCCACTTTCTACCACAAGGAACACCCGCCCTATTAATTCCTATGCTCGTAATTATTGAAACTATTAGCCTATTTATTCAACCAGTAGCCCTAGCCGTACGACTGACAGCCAACATTACAGCAGGGCACCTATTAATTCATCTAATTGGAGGGGCCACATTAGCACTACTCAA---CATCAACACTATAACAGCTTTTATCACATTTACTATCCTCATTCTATTAACTATTCTTGAATTTGCAGTAGCTCTGATCCAAGCTTATGTGTTTACACTGCTAGTAAGCTTATACCTACACGACAATAC +>Muntiacus_crinifrons_NC_004577 +------------ATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAATA---GTTCTAGGCCTTCCACTCGCCACCCTAATTGTTATATTTCCTAGTATATTATTTCCAACATCAAAC---CGTCTAGTAAATAACCGCCTTATTTCCCTCCAACAATGAGCACTCCAACTTGTATCAAAACAAATAATAGGCATTCATAATACTAAAGGGCAAACATGAACATTAATACTTATATCCCTAATTCTATTTATTGGATCCACAAATCTCCTAGGCCTATTACCTCATTCATTTACACCAACTACACAACTATCAATAAACCTAGGTATGGCCATCCCCCTATGAGCAGGAGCTGTAATCACTGGCTTCCGCAACAAGACTAAGGCATCACTTGCCCACTTTCTTCCACAAGGAACACCAACCCCGTTAATTCCTATATTAGTTATTATCGAGACTATTAGTCTTTTTATTCAACCAATTGCCCTAGCTGTACGACTAACAGCCAACATTACTGCAGGACACTTGCTAATTCACCTGATTGGAGGAGCCACACTTGCACTAATAAGC---ATCAGTACTACAACAGCCCTTATTACATTCATTATTCTAGTGCTACTTACAATTCTTGAGTTCGCAGTAGCCATAATCCAAGCCTACGTATTTACTCTTCTAGTCAGCCTCTACCTGCATGACAACACA +>Lobodon_carcinophaga_NC_008423 +------------TAATGAACGAAAATCTATTCGCCTCTTTCACTACCCCTA---CAATAATAGGCCTTCCTATTGTAATTCTAATCATCCTGTTCCCAAGCATCCTATTTCCTTCTCCTA---ATCGACTAATTAACAACCGACTTATCTCAATTCAACAATGACTAATTCAACTAACATCAAAACAAATACTATCAATTCACAACCACAAAGGACAAACATGAGCACTAATACTTATATCACTCATTCTATTCATTGGATCTACCAACTTACTAGGTCTCCTACCACACTCATTTACCCCTACCACTCAACTGTCAATGAATCTAGGAATAGCTATCCCCCTATGAGCAGGAACAGTCATTATAGGCTTTCGGCATAAAATAAAAGCGTCCCTAGCCCACTTTCTACCTCAAGGAACACCCCTACTCCTTATCCCAATATTAGTAATTATTGAAACTATCAGTCTATTCATCCAACCCATAGCCCTGGCTGTACGACTAACAGCCAACATCACTGCGGGTCACCTACTGATTCACCTAATCGGAGGGGCTACCCTTGTCCTTATAG---ACATTAGCACTGTTACAGCCTCAATTACTTTTATCATCCTTATTCTACTCACTATTCTAGAATTTGCTGTAGCCCTCATTCAGGCCTATGTCTTCACATTACTAGTTAGTCTGTATCTACATGACAACA +>Lepus_townsendii_haplotype_tow_NC_024041 +------------AATGAACGAAAATCTATTCTCCTCTTTTATTACCCCAAC---AATAATAGGCTTACCAATCGTAATCCTAATTATTATATTCCCAACCCTTCTATTTCCTGCTCCTAC---CCGACTAATCAACAACCGACTAGTCTCAGCTCAACAATGATTAGCTCAATTAATTTTAAAACAAATAATAATAATGCACTCTCCTAAAGGACGGACCTGATCCCTCATGCTAATCTCCCTAATTATATTTATTGGCTCAACTAACCTTCTAGGTCTCTTACCCCACTCATTTACACCAACAACCCAATTATCAATAAATCTAGGAATAGCTATCCCACTATGAGCAGGAGCTGTAATTACAGGCTTCCGATACAAAACTAAAGCATCACTAGCTCACTTTCTGCCACAAGGAACACCTGTACCCCTTATTCCTATACTAGTAATTATTGAAACAATTAGCCTATTCATTCAACCCATGGCCTTAGCTGTACGACTCACAGCCAACATTACAGCAGGCCACTTACTAATACATCTTATCGGAGGCGCAGCACTCGCCCTAATCTC---AATTAGTCCAACAACAGCCCTAATTACTTTTATTATTCTTATTCTCCTAACAATTCTAGAATTTGCTGTAGCCCTAATTCAAGCCTACGTTTTTACCCTTCTTGTAAGCCTATATTTACACGATAACAC +>Crocuta_crocuta_isolate_CC8_NC_020670 +------------ATGAACGAAAATCTATTCTCCTCTTTCACTACCCCAACA---ATAATAGGCCTACCTATCGTTGTTTTAATTACCATATTCCCAAGCATCCTATTCCCCTCACCAAAC---CGATTGATTAATAACCGCCTAGTCTCACTCCAACAATGACTAGTACAACTAACAGCAAAACAAATACTCACCACCCACAATCATAAAGGACAGACATGAGCTTTAATGCTAATGTCCCTAATTATATTTATCGGCTCAACTAACCTACTGGGGCTACTCCCACACTCATTCACACCCACAACACAACTCTCTATAAACCTGGGAATAGCTATCCCCCTATGAGCAGCTACCGTGATGGTCGGGTTCCGACATAAAACAAAGGCATGCCTAGCTCACTTTCTACCCCAAGGAACACCTTTCCCCCTAATCCCCATGCTCGTAATCATTGAAACCATTAGCCTATTCATTCAACCCGTGGCCCTAGCTGTGCGACTCACGGCTAACATTACTGCAGGTCACCTGTTAATGCACCTAATCGGAGGCGCTACCCTAGCACTGATAAAA---ATCAGCACCTCTACTGCTCTTATCGCTTTTACAGTCCTTGTCCTACTGACAATCCTTGAATTCGCCGTAGCCCTGATTCAGGGCTACGTTTTTACCCTACTAGTAAGCCTATACCTACACGACAATACC +>Dama_dama_isolate_CYTO_NC_020700 +------------TAATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAA---TAATCCTGGGCCTTCCACTCACTACACTCATCGTCATATTTCCTAGCCTATTATTTCCAACATCAA---ATCGTTTAGTAAACAATCGTCTTATTTCCCTTCAACAATGAATACTTCAACTTGTATCAAAACAAATAATAGGAATTCACAACATCAAAGGACAAACATGGGCACTAATACTCATATCTTTAATTTTATTTATCGGATCAACAAATCTCTTAGGCTTACTACCCCACTCATTTACACCAACCACACAATTATCAATAAATCTAGGCATAGCCATCCCCCTATGAGCAGGAGCTGTAATTACAGGTTTCCGCAATAAAACTAAAGCATCACTTGCTCATTTCCTTCCACAAGGAACCCCAACCCCATTAATTCCTATATTAGTTATCATCGAAACTATTAGTCTTTTTATTCAACCAATCGCCTTAGCCGTACGATTAACAGCTAATATTACTGCAGGGCACCTGCTAATTCACTTAATTGGAGGGGCTACACTTGCACTAATAA---GCATCAGTACTACAATAGCTCTTATTACATTTACTGTTCTGGTCTTACTTACAATCCTTGAGTTTGCAGTAGCCATAATCCAAGCCTACGTATTTACTCTTCTAGTTAGCCTTTACCTGCATGACAATA +>Equus_burchellii_chapmani_isolate_6381_NC_018781 +------------AATGAACGAAAATCTATTCACCTCTTTCGCTACCCCAAC---AATAATAGGCCTCCCTATTGTAATCCTAATTATCATATTCCCCAGCATCCTATTCCCTTCATCCAA---CCGACTAATCAACAACCGCCTAATCTCAATTCAACAATGACTAGTCCAACTTACATCAAAACAAATAATAGCTATCCACAACAACAAAGGACAAACCTGAACCCTCATACTCATGTCGCTAATCCTATTTATTGGCTCAACAAACTTACTAGGTCTACTACCTCACTCATTTACACCAACAACACAACTATCAATAAACCTAGGCATAGCCATTCCCCTATGAGCAGGAACGGTATTCATAGGCTTTCGTCATAAAACAAAAGCAGCCCTAGCCCACTTTTTACCTCAAGGAACCCCTATTTTCCTCATCCCCATACTAGTGATTATTGAAACTATCAGCCTATTTATTCAACCTGTAGCTCTAGCCGTTCGGCTAACTGCTAACATTACCGCCGGACATCTTCTAATTCATCTTATCGGTGGAGCAACACTAGCCCTCATAAA---CATTAGCCCCTCAACAGCCCTTATTACATTTATTATTCTAGTCCTACTGACTATCCTCGAATTCGCAGTAGCCATAATCCAAGCCTACGTATTCACTCTCCTAGTAAGCCTCTACCTACATGATAACAC +>Rhizomys_sinensis_NC_026124 +------------ATGAACGAAAATTTATTCTCCTCTTTCTCTACCCCCACA---CTTATAGGCCTCCCTATCGTTATTCTCATTATTTTCTTTCCAAGCATTTTTTTATTCAAGTCTAAC---CGCTTTATAAATAACCGACTTCTATCACTTCAATTATGACTAACCCAAATAATCACAAAACAAATAATACTTATTCATTCACCAAAAGGCCGTTCATGAACCCTATTACTTACATCACTAATCATCTTTATCGCCTCTAGCAATTTACTAGGACTTTTACCCCACACATTTACCATTACAACACAACTCTCAATAAACCTAGGCTTAGCTATTCCACTATGAGCAGGAGCAGTACTCCTAGGCTTACGACATAAAACAAAAACATCTTTAGCCCACTTTCTTCCTACAGGAACACCAATTTTCTTAATTCCAATACTTATTATTATTGAAACTATCAGCCTATTTATTCAACCAATAGCCCTAGCTGTTCGTCTTACCGCCAACATCACAGCAGGACATTTACTTATACACTTAATTGGCAGCGCTACAATAGCCCTCACCTCA---ATCAATATCCCAATTGCCTCTATCACATTTATTATTCTTGTCCTTTTAACAATTTTAGAACTCGCCGTAGCACTTATTCAAGCCTATGTTTTTACACTTCTTGTCAGTCTCTACTTACATGATAATTCC +>Hemitragus_jemlahicus_NC_020628 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTA---TAATAATAGGCCTCCCCCTTGTTACTCTTATTATTTTATTTCCTAGCTTATTATTCCCCACATCAA---ACCGATTAATTAACAACCGCCTCATCTCCCTCCAACAATGGACACTCCAGCTTGTATCAAAACAAATAATAAATATCCATAATACCAAAGGACAAACATGAACATTGATATTAATATCCCTAATCTTATTTATTGGGTCTACAAACCTATTAGGCCTTTTACCTCACTCATTCACACCAACTACACAACTATCAATAAACCTAGGCATGGCTATTCCCTTATGAGCAGGAGCCGTAATCACAGGCTTTCGCAATAAAACTAAAGCATCACTTGCCCACTTCCTACCACAAGGAACACCCACCCTTCTAATCCCAATGCTAGTAATTATTGAAACCATCAGCCTCTTTATCCAGCCAATAGCCCTCGCCGTACGACTGACAGCTAACATCACAGCAGGACACTTATTAATTCACTTAATCGGAGGAGCCACCCTTGCACTAACAA---GCATTAACACCACAACAGCACTCATCACATTCACTATTCTAATTTTACTAACAATCCTCGAATTCGCAGTAGCCATGATTCAAGCCTACGTGTTTACTCTCCTAGTCAGCCTATACCTGCATGACAACA +>Phascolarctos_cinereus_NC_008133 +------------AATGAACAAAAATCTATTTACCCAATTCATTACCCCCAC---AATTATAGACACCACCATATTACCAATAATCATATACTTCCCGTGTCTTATCCTTTCAACCCCAAA---ACACTTATTTTCTAACCGAATCCAAACACTACAAATTTGATTAATCCGACTAATTACTAAACAAATAATATTACTACATAACAAACAAGGCCAAACCTGAACTCTCATACTAATATCATTGATCCTATTCATTTCATCAACAAACTTACTAGGCCTTCTTCCATATTCCTTCACACCAACTACCCAACTTTCAATAAATATCAGCATGGCCATCCCCTTATGAATAGCTACAGTAATTATAGGATTACGAAATAAACCAAAAACATCTTTAGCCCATTTACTACCACAAGGAACACCAACCCCTCTAATCCCGATACTTATCATCATTGAAACTATTAGCCTATTGATTCAACCACTAGCTCTAGCAGTACGACTAACAGCTAACATTACTGCAGGCCATTTACTCATCCACCTCATTACTTCCGCAACACTAGCTCTCCTATC---CATTAACATAATTGCATCAACCATGACATTTATCATTTTCCTTATACTAATAATCCTGGAACTAACCGTAGCCCTTATCCAAGCTTACGTTTTCACCCTCCTAGTAAGCCTATACTTACATAATAACTC +>Hylobates_pileatus_NC_014045 +------------ATGAACGAAAATCTATTCGCTCCATTCGCTACCCCCACA---ATTCTAGGCCTACCCGCCGCAGTGCCAATTATTCTATTTCCCTCCCTGCTGGTCCCCACTTCCAAA---TACCTCATCAACAACCGACTAATTGCCACCCAACAATGACTAATTCAACTGACCTTAAAACAAATAATAACGGTACATAGTACCAAAGGACGAACCTGGTCCCTCATACTAATCTCCCTAATTACCTTTATTGCCACAACCAACCTCCTTGGCCTCCTGCCCCACTCATTCACACCAACCACCCAACTATCCATAAACCTAGCCATAGCCGTTCCCCTATGAGCAGGCACGGTAGCCACAGGCCTTCGCCTTAAAACCAAAAACACCCTTGCCCACCTTCTACCCCAAGGCACACCTACCCCCCTCATTCCAATATTAATTATCATCGAAACCATTAGCCTATTTATCCAACCCGTAGCCCTCGCTGTACGACTAACTGCAAATATTACAGCAGGCCACCTACTAATACACTTGATCGGGGCAGCCACACTAGCCCTATCAACT---ATTAGCCTACCCGCAACTCCCATTATCTTCACAATCTTAGCTCTACTAACAATCCTCGAAATTGCCGTAGCCCTAATTCAAGCGTATGTCTTCACACTCCTGGTAAGCCTCTATCTGCATGACAACACA +>Mesoplodon_europaeus_isolate_SWFSC_ID_z0002698_NC_021434 +------------TAATGAACGAAAATCTATTTGCCTCTTTCACAGTCCCAG---TAATACTAGGTATTCCTATCGTCACTCTGATTATTGTATTCCCCACTATTCTATTCCCTACACCAA---ACCGACTAGTTACCAACCGCACAATCTCCCTCCAACAATGATTAACCAAACTCACATCAAAACAACTAATAAATACACACAACCCCAAAGGTCAAACCTGATCCCTAATACTCATCTCACTCCTCTTATTTATTGCCTCTACAAACCTCCTTGGAATATTACCCCACTCATTTACACCCACTACACAACTCTCAATAAATATTGGAATAGCTATCCCTTTATGAGCTGGCACAGTCATTACAGGCTTCCGCAATAAAACAAAAGCAACTCTAGCCCATCTCCTACCACAAGGCACACCTACCTTTCTCATTCCTATACTAGTAATTATTGAAACTATCAGCCTATTCATCCAACCAGTAGCACTAGCTGTACGACTAACCGCCAACATTACGGCAGGTCACCTATTAATACATTTAATTGGAAAAACAACCCTTGTACTAATAA---GTATTAATCCATCCGTAGCCTTTATTACATTTACAATTCTCGTTCTACTAACTATTCTTGAATTCGCTGTCGCTTTAATCCAAGCTTATGTATTCACTCTCTTAGTAAGCCTATATCTGCACGACAATA +>Cervus_nippon_taiouanus_NC_008462 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAAT---AATACTAGGCCTTCCACTAGCTACTCTCATCGTTATATTTCCTAGCCTATTATTTCCAACATCAAA---TCGTCTAGTAAATAACCGTCTTATTTCCCTCCAACAATGAATACTTCAACTTGTATCAAAACAAATAATAGGAATTCACAATGCCAAAGGACAAACATGAACACTAATACTCATGTCTCTAATCTTATTTATTGGATCCACAAATCTTCTGGGCTTATTACCCCACTCATTTACACCAACCACACAATTATCAATAAACCTAGGCATAGCCATTCCCCTGTGAGCAGGAGCTGTAATTACAGGTTTCCGTAATAAAACTAAAGCATCGCTTGCTCACTTTCTTCCACAAGGAACTCCAACCCCACTAATCCCCATACTAGTTATTATCGAAACTATTAGTCTTTTTATTCAACCAATCGCTTTAGCCGTACGACTAACAGCTAATATTACTGCAGGACACCTACTAATTCACCTAATTGGAGGAGCTGCACTTGCACTAGTAAG---TATCAGTACTACAATAGCTCTTATCACATTCATTATTCTAGTCCTACTCACAATCCTTGAGTTTGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTTCTAGTCAGCCTTTACTTGCATGACAACAC +>Cephalophus_callipygus_isolate_GLC24_NC_020686 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTATA---ATACTAGGCCTACCACTCGTTACCCTCATCGTCCTATTCCCCAGCTTACTATTTCCAACATCAAAT---CGACTAGTTAACAATCGCCTTATTTCCCTTCAACAATGACTACTCCAACTCATCTCAAAACAAATGATAAGCATCCACAATCCTAAAGGACAAACATGAGCACTAATACTAATATCCCTGATCTTATTCATTGGATCAACAAATCTACTAGGTCTACTACCCCACTCATTCACGCCAACCACGCAACTATCAATAAACTTAGGCATGGCCATCCCCCTATGAGCAGGGGCTGTCGTTACAGGCTTTCGTAATAAAACTAAAGCATCACTCGCCCATTTCCTGCCGCAAGGAACGCCAACCCCATTAATTCCAATACTAGTAATTATTGAAACCATCAGCCTATTCATCCAACCAGTAGCCCTCGCTGTACGACTGACAGCTAATATTACAGCAGGACACCTATTAATCCACTTAATCGGAGGAGCCACACTCGCACTAATAAAC---ATCAGCACCACAACAGCTCTTATTACATTCATTATCTTAGTGCTGCTAACAATTCTTGAGTTCGCGGTAGCCATAATTCAAGCTTATGTATTCACCCTTCTAGTCAGCCTATACCTGCACGACAACACA +>Gazella_spekei_isolate_AWWP_NC_020709 +------------TAATGAACGAAAATCTATTTACCTCTTTCATTACCCCTA---TAATTCTAGGCCTCCCCCTCGTTACTCTCATTGTCTTATTTCCTAGCCTATTATTCCCAACATCAA---GCCGACTAGTAAATAATCGCCTTATCTCTCTTCAACAATGAGTACTTCAACTTGTATCAAAACAAATAATAAGCATCCACAACCCCAAAGGACAAACATGAGCACTTATACTGATGTCCTTAATCCTATTTATTGGGTCAACAAACTTACTAGGCCTACTACCCCACTCTTTTACACCAACCACACAGCTATCAATAAATCTAGGTATAGCCATCCCCCTATGAGCAGGAGCTGTAATCACGGGCTTCCGTAACAAAACTAAAGCATCACTTGCCCATTTCTTACCACAAGGAACACCCACCCCTCTAATCCCTATGCTAGTAATTATCGAAACTATTAGCCTATTTATTCAACCAGTAGCCCTCGCAGTACGATTAACAGCCAATATTACAGCAGGACACCTATTAATTCACCTAATCGGAGGAGCCACATTGGCACTAATAA---ATATCAGTACTACAACAGCTCTTATTACATTTATTATCTTAGTTTTACTAACAATTCTTGAATTCGCAGTAGCTATAATCCAAGCTTACGTGTTTACTCTTCTAGTTAGCCTATACCTACACGATAACA +>Procyon_lotor_NC_009126 +------------AATGAACGAAAATCTATTCTCCTCTTTCACTACCCCTAC---AATAATGGGACTTCCTCTCATTATCCTTATTACTATAGCCCCAAGCATCCTATTTCCTTCACCAGC---CCGACTAATCAACAACCGATTTATTTCAATCCAACAATGATTGATCTGTCTAGTATCAAAACAAATACTCTCGATCCATAACCATAAAGGACAAACCTGAGCACTAATACTATTATCACTAATCTTATTTATTGGGTCAACCAACTTGCTAGGACTACTCCCACACTCATTTACTCCAACCACTCAATTATCCATGAACTTAGGGATAGCTATCCCCCTATGGGCCGGCACAGTGATTCTTGGTTTTCGATACAAGACAAAATCCTCCCTAGCCCACTTCCTACCCCAAGGAACACCTCTTCCTCTAATCCCCATGCTTGTTATTATTGAAACCATCAGCCTATTTATTCAACCCATAGCTCTAGCCGTACGATTAACGGCCAACATCACTGCAGGTCACCTATTAATTCACCTAATTGGAGGAGCCACTCTGGCTCTAATTAG---TATCAACGTGCCCACAGCCTTAATTACTTTTATCATTCTTACTTTATTAACCATCTTAGAATTTGCCGTAGCCTTAATCCAAGCCTATGTCTTTACCCTATTAGTAAGCCTATACTTACATGATAATAC +>Rattus_tunneyi_NC_014861 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAACA---GTAATAGGACTACCAATTGTCGTAACCATCATCATATTTCCATCAATTCTGTTTCCATCATCAGAA---CGTCTAATTAGCAATCGTCTACACTCATTTCAACACTGACTAATTAAACTTATTATCAAACAAATAATATTAATTCATACACCAAAAGGACGAACCTGAGCACTAATAATTGTATCACTAATTATATTTATTGGCTCAACTAACCTCTTAGGCCTACTTCCCCATACATTTACCCCTACCACCCAACTGTCCATAAACCTAAGCATAGCCATCCCTCTATGAGCAGGAGCCGTAATTTTAGGATTCCGACACAAACTAAAAAGTTCTTTAGCCCATTTTCTACCACAAGGAACACCCATTTCACTCATTCCCATACTAATTATTATCGAAACTATCAGCTTATTTATTCAACCAATAGCACTGGCAGTACGACTAACAGCAAACATCACAGCAGGCCACTTATTGATGCACCTAATTGGAGGAGCTACTTTAGTACTCATAAAC---ATCAGCCCACCCACCGCCACAATCACATTTATCATTCTTCTTCTACTCACAATACTCGAATTCGCCGTAGCCTTAATTCAAGCCTATGTATTTACCCTCCTAGTGAGCCTATACCTACATGATAACACA +>Macaca_sylvanus_NC_002764 +------------TAATGAACGAAAACCTGTTTACCCCATTCTCAACCCCAA---TAATCTTAAATCAACCCGCTACAATTCCCATCATCCTATTCCCCACCCTACTAATCCTAACCTCTA---AACACCCCATTAATAATCGACTAGCTACTATTCAACAAAACTTGACTCAATTTACCCTAAAACAAATAATAACAACCCACAATGCTAAGGGACAAACCTGATCTTTAATACTAACATCTCTAATCACCTTTATTACCATAACAAACCTTTTAGGACTTACACCCCACTCGTTCACACCAACTACCCAACTTTCCATAAATCTAGCCATACGAATCCCCCTATGAGCAGGCACAGTGATCATAGGACTTCGCTTTAAAACCAAAAACTCTCTAGCCCACCTTTTACCACAAGGCACACCTACACTCCTCATCCCCCTGCTAGTAGCAATCGAAACTATTAGTCTACTTATTCAACCAGTAGCCCTAGCCGTACGACTAACCGCAAACATCACAGCTGGTCACCTACTAATACACTTAATTGGAAACGCCACGCTAGCACTATCAT---CCATCAACTTCCCCATAACTCTACTAATCTTCACACTCCTAGCACTATTAACTATTCTAGAGGTCGCAGTAGCCCTAATTCAGGCCTACGTCTTCACACTCTTAACCAGCCTCTACTTGCATAACAACA +>Propithecus_edwardsi_isolate_RANO344B_NC_026093 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAAC---AATTGTAGGAATCCCTATTGTGATCCTAATCATCGCAGTCCCTAGCATTCTCTTCCCTTCGCCCAC---CCGTCTCATTTCCAACCGATTGACTTCCTTACAACAATGACTTATTCAACTAGTACTAAAACAACTAATAATGATACACAGCATTAAAGGACGAACTTGGTCCCTCATACTAATTTCACTAATCCTATTTATTGGTTCAACCAACTTACTAGGTCTATTACCCCACTCATTCACCCCCACTACTCAACTATCAATGAATCTAGGCATAGCCATCCCACTATGAGCTGCTGCAGTCATTACAGGCTTTCGTCACAAAACAAAAATATCCTTAGCTCACCTACTACCACAAGGAACGCCAGTCCCTCTTATTCCCATACTAGTAATCATCGAAACCATTAGCCTTTTCATTCAACCTATAGCATTAGCCGTACGATTGACGGCTAACATTACAGCAGGCCACCTACTCATACACTTAATTGGTGGAGCCACCTTAGTATTAACCTC---AATTAGTCCCACCACTGCCTCAATTACATTTACTATTCTTATTCTCCTTACAATCCTTGAATTTGCCGTCGCCCTAATCCAAGCCTATGTATTTACTTTACTAGTTAGCCTTTATTTACATGACAACAC +>Manis_tetradactyla_NC_004027 +------------ATGAACGAAAATCTATTCACCTCTTTCACTGCCCCAACA---ATTATAGGCATTCCTATTACCTTAATTATTATCATGTTCCCAATCATTATATTCCCTACACCAAAG---CGATTAATTAATAACCGTATTGAAGCCATTCAACAATGACTTCTACAGCAAACAACCAAACAGATAATATCAATTCACAACTATAAAGGACAGACCTGAACTTTGATACTTATATCATTGATTATATTTATTGCTTCTACGAATCTATTAGGCCTATTACCCTATTCATTCACCGCTACAACTCAACTATCAATAAATCTAGGTATGGCCATTCCTTTATGAGCGGCAACTGTGATTACAGGATTTCGACATAAAACGAAAATCTCCCTAGCACATTTTCTACCACAAGGCACACCAACTCCCCTTATCCCTATATTAGTAATTATCGAAACAATCAGCCTACTTATCCAACCCATAGCACTCGCAGTGCGATTAACTGCTAACATTACAGCAGGTCACCTCCTAATACACTTAATTGGAAGTGCAATCTTTGCTCTAATATCT---ATTAATCTCACTGTAGCAACACCTACCTTTATTATTTTAGTCCTACTTACAATCCTCGAATTCGCAGTTGCACTTATTCAAGCATACGTATTCACCTTGCTTGTTAGCCTCTATCTACATGACAATACC +>Panthera_leo_persica_NC_018053 +------------TAATGAACGAAAATCTATTCACCTCTTTCACTACCCCAA---CAATAATAGGACTGCCTGTTGTCGTATTAATTATTATGTTCCCCAGCATTCTATTCCCCTCACCCA---ACCGACTAATTAATAACCGCCTAGTCTCACTCCAACAATGATTAGTACAACTAACATCAAAACAAATATTAGCTATTCACAATCACAAAGGACAAACCTGAGCCCTAATACTCATGTCTCTCATTTTATTTATCGGATCTACAAACCTGTTGGGCCTACTACCCCACTCATTTACCCCAACTACCCAATTATCAATAAACTTAGGAATAGCTATCCCTCTATGAGCCGGTACCGTAGTCACCGGATTTCGCCACAAAACTAAAGCGTCCCTGGCTCACTTTCTACCACAAGGAACACCAATCCCCTTAATTCCTATGCTTGTAATTATTGAAACCATTAGCCTTTTTATTCAACCCGTGGCTCTGGCCGTACGACTTACAGCCAACATTACTGCGGGTCACTTATTAATACACTTAATTGGAGGAGCTACCCTGGCCCTGACAA---ACATTAATGCCTCTGTCGCTTTAATTACCTTTATCATCCTCATCCTGCTGACAGTCCTTGAATTCGCTGTGGCCCTAATCCAAGCCTACGTCTTTACCCTACTTGTAAGCCTGTACCTACATGACAATA +>Pygathrix_cinerea_2_RL_2012_NC_018063 +------------AATGAACGAAAATTTATTTACCTCATTTACACACCCAAC---ACTCCTAGGGCTACCAGCCGTAGTACCTATTATTCTATTTCCTACATTACTACTTCCAACCTCAAA---ATATCTTATTAATAATCGACTAATTACTATTCAACAAAATCTAATTCAGCTAATCGTAAAACAAATAATAATAATTCATAATATTAAAGGACAAACCTGGTCTCTAATACTAATATCCCTAATCATTTTTATTGCCACAACTAACCTTCTCGGACTCTTACCCCACTCATTTACACCTACCGCCCAACTATCAATAAATCTGGCTATAGCAATCCCTCTATGAGCAGGTACAGTAATCACAGGCCTTCGCTTCAAAACTAAAAGCTCCTTAGCGCACTTTTTACCACAAGGTACACCCACACTACTTATCCCCATATTAGTAGTTATTGAGACCATCAGTTTATTTATTCAACCAGTAGCCCTTGCTGTACGCCTAACCGCCAATATTACAGCAGGACATCTACTTATGCACCTAATTGGAAGTGCTACGCTAGTACTATCAAC---CATCAGCCTCTCTATAACCTCACTAACTTTAGTGCTTCTAGTATTATTAACAATTCTAGAAATAGCAGTCGCCCTAATTCAAGCCTACGTTTTCACACTATTGGTAAGCCTTTATCTACATGACAACAC +>Nomascus_siki_NC_014051 +------------ATGAACGAAAATCTATTCGCTTCATTCGCTGCCCCCACA---ATCCTAGGCCTACCCGCCGCAGTACCAATTATTCTATTCCCCTCTCTACTGATTCCCACCTCCAAA---TATCTCATCAACAACCGACTAGTTACCACCCAGCGGTGACTAATCCAGCTAACCTTAAAACAAATAATAACAATACACAATGCTAAAGGACGAACCTGATCCCTCATACTAATTTCCCTAATCACCTTCATTGCCACAACCAACCTACTAGGCCTCCTACCCCACTCATTCACACCAACCACCCAGCTATCCATAAACCTGGCCATAGCAATTCCCCTATGAGCAGGCACAGTAGCTACAGGTTTTCGTCTTAAAGCCAAAAACACCTTCGCCCACCTCCTACCCCAAGGCACACCTACACCTCTCATCCCCATACTAATTATCATTGAAACCATTAGTCTGTTTATTCAGCCCATAGCCCTAGCCGTACGCCTAACCGCAAATATCACAGCAGGTCACCTACTAATACACTTAATCGGGGCAGCCACATTAGCCCTATCAACC---ATTAGTCTATCCGCAACACCCATCATCTTCACAGTCCTAGCCCTACTGACAATCCTCGAAGTCGCCGTCGCTCTAATTCAAGCATATGTATTTACACTCCTGGTAAGCCTCTACCTGCACGATAACACA +>Martes_zibellina_NC_011579 +------------TAATGAACGAAAATTTATTCTCCTCTTTCATTACCCCTA---CAATAATAGGACTCCCTATCGTTATCGCCATCACCATATTCCCAAGCATCATATTTCCCTCACCAA---GCCGGTTGATCAACAACCGGCTCATCTCCATCCAACAGTGATTGGTTCAACTAACATCGAAACAAATACTGTCTATTCACAATCAAAAAGGACAAACCTGAGCACTAATATTAATATCCCTAATTCTATTTATTGGCTCCACCAATCTACTAGGCCTCCTACCGCACTCATTCACTCCCACCACGCAACTATCCCTAAATCTGGGCATAGCTATCCCCCTATGAGCGGGCACAGTAATTACTGGCTTCCGGCATAAAACAAAGGCCTCTTTAGCCCACTTCCTACCACAAGGAACACCACTTCCTCTAATTCCCATGCTTGTAGTCATTGAAACCATCAGTCTATTCATTCAACCCATAGCCCTGGCCGTACGACTAACAGCCAATATCACTGCAGGTCACTTATTAATTCACCTAATTGGGGGAGCCACCCTAGCTTTAATGA---GTATCAGCACTATCACGGCCATAGTGACCTTCACCATCCTCATCCTTCTAACCATCTTAGAGTTTGCAGTAGCCCTTATCCAAGCCTACGTCTTTACTTTACTAGTAAGCCTGTACCTACACGATAACA +>Nanger_dama_isolate_CYTO_NC_020724 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTAT---AATTCTAGGTCTTCCCCTCGTCACCCTTATTGTCCTATTTCCCAGCTTATTATTTCCAACATCAAA---CCGGCTAATAAACAATCGCCTTATCTCTCTCCAACAATGAGCACTTCAACTTGTATCCAAACAAATAATGAGCATCCATAACCCCAAAGGACAAACATGAGCACTAATACTGATATCCCTAATTATATTTATTGGATCAACAAACTTATTAGGCCTACTACCCCACTCTTTTACACCAACCACACAACTATCAATAAACCTAGGCATAGCTATTCCCCTATGAGCAGGAGCTGTAATCACGGGCTTCCGCAACAAAACCAAGGCATCACTTGCTCACTTTTTACCACAAGGAACACCTACTCCCCTAATCCCTATACTGGTGATTATCGAAACTATTAGCCTATTTATTCAACCAGTAGCCCTTGCAGTACGACTAACAGCCAACATTACAGCAGGACACCTATTAATTCACTTGATTGGAGGAGCCACATTAGCACTAATAAA---CATCAGCACTACAACAGCTCTCATTACATTTATTATCTTAGTCCTACTAACAATCCTTGAATTCGCAGTAGCCATAATTCAAGCTTACGTATTTACTCTTCTAGTCAGCCTATACTTACACGATAACAC +>Muntiacus_reevesi_NC_004069 +------------ATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAATA---ATTCTAGGCCTTCCGCTCACCACCCTTATTGTTATATTTCCTAGTCTATTATTTCCAACATCAAAC---CGTTTAGTAAATAACCGCCTTATTTCCCTCCAACAATGAGCACTCCAGCTTGTGTCAAAACAAATAATAGGTATCCATAATACTAAAGGGCAAACATGGACATTAATACTCATATCTCTAATCCTATTCATTGGATCCACAAATCTTCTAGGCCTATTACCTCATTCATTTACACCAACTACACAACTATCAATAAACCTAGGTATGGCCATCCCCCTATGAGCAGGAGCTGTAATCACTGGCTTCCGCAACAAGACTAAAGCATCGCTTGCCCATTTTCTTCCACAAGGAACACCAACCCCATTAATTCCTATACTAATTATTATTGAGACCATTAGTCTTTTTATTCAACCAATTGCCTTAGCTGTGCGACTAACGGCCAACATTACTGCAGGACACCTGCTAATTCACCTAATTGGAGGAGCCACACTTGCACTAATAAGC---ATCAGTACTACAACAGCCCTCATCACATTCATTATTCTAGTACTGCTTACAATTCTTGAGTTCGCAGTAGCCATAATTCAAGCCTACGTATTCACCCTTCTAGTCAGCCTTTATCTGCATGACAACACA +>Dicerorhinus_sumatrensis_NC_012684 +------------TAATGAACGAAAATCTATTCGCCTCTTTCACTACCCCTA---CAATAATAGGATTACCTATCGTCATCTTAATTATTATATTTCCCAGCATTATATTCCCCTCACCCA---ACCGACTCATCAACAATCGTTTAATTTCCATACAGCAATGACTCCTTCAGCTGACATCAAAGCAAATAATGTCCGCCCACAATAGTAAAGGACAAACCTGAGCACTAATACTCATATCCCTTATCCTATTTATTGCTTCAACCAATCTACTGGGACTGTTACCACACTCATTCACACCTACTACCCAACTGTCAATGAATCTAGGCATAGCTATCCCTCTGTGAGCAGGAACAGTATTTGTGGGATTTCGCCATAAAACCAAAGCATCTCTAGCTCACTTTCTTCCCCAAGGAACACCTGTTTTTCTCATCCCCATACTAGTAATTATCGAAACCATCAGCCTATTTATTCAACCTATCGCCCTTGCCGTACGACTAACAGCCAACATCACTGCAGGGCACCTTCTAATACACTTAATCGGAGGAGCAACGCTGGCCCTAATAG---ACATTAGCCCCACTACAGCCCTTATCACGTTCATTATTCTCATTTTACTTACCATTCTTGAATTTGCCGTAGCCCTTATTCAAGCTTACGTATTCACCCTTTTAGTAAGCCTCTACCTACACGACAATA +>Mesoplodon_densirostris_isolate_SWFSC_ID_z000410_NC_021974 +------------AATGAACGAAAATCTATTTGCCTCTTTCACAATCCCAAT---AATATTAGGTCTCCCTATTATTACTCTAATCATTATATTCCCTACCATTCTATTTCCTACATCAAA---CCGACTAATTAATAACCGTACAATCTCCCTCCAACAGTGACTAACTAAACTCACATCAAAACAATTAATAAATACACACAGCCCTAAAGGTCAAACTTGATCCCTAATACTAATTTCACTTCTCTTATTTATTGCTTCTACAAACCTTCTTGGAATATTACCCCACTCATTTACACCCACTACACAACTCTCTATAAACATTGGAATAGCTATCCCTCTATGAGCCGGTGCAGTAATTACAGGTTTTCGTAACAAAACAAAAATATCCTTAGCTCACCTCCTACCACAAGGCACACCTACTTTCCTTATTCCTATATTAGTAATTATCGAAACTATCAGCCTGTTCATCCAACCAGTAGCACTAGCTGTACGACTAACTGCCAACATTACAGCAGGACACCTATTAATACATCTAATTGGAAAAACAACCCTAGTACTAATAAG---CATTAACCTGTCTGTAGCCCTCATTACATTCATAATCCTCATTCTATTAACTATTCTTGAATTCGCCGTTGCCTTAATCCAAGCTTACGTATTTACTCTCCTAGTAAGCCTATATTTGCATGATAATAC +>Rattus_praetor_NC_012461 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAACA---GTAATAGGTCTACCAATTGTCGTAACCATCATTATATTCCCTTCAATTCTATTCCCATCATCAGAG---CGCCTAATTAGCAACCGCCTGCACTCATTTCAACACTGACTAATCAAACTTATCATCAAACAAATAATGTTAATTCATACACCAAAAGGACGAACCTGAGCACTAATAATTGTATCACTAATTATATTTATTGGCTCAACTAACCTTCTAGGCCTACTCCCCCATACATTCACCCCCACCACTCAACTGTCCATAAACCTAAGCATAGCTATCCCCCTATGAGCAGGGGCCGTAATCTTAGGATTCCGACATAAACTAAAAAATTCCCTAGCCCATTTCCTACCACAAGGAACACCTATTTCACTCATTCCCATACTAATCATTATCGAAACTATCAGCCTATTTATTCAACCAATAGCACTAGCAGTACGACTAACAGCAAACATCACCGCAGGCCACCTATTAATGCACCTGATCGGAGGGGCTACTCTAGTACTCATGAAT---ATCAGCCCGCCAACCGCTACAATTACATTTATCATTCTTCTCCTACTTACAATGCTCGAATTTGCCGTAGCCTTAATTCAAGCCTATGTATTTACTCTCCTAGTAAGCCTGTACCTACATGATAACACA +>Cercopithecus_mitis_NC_023961 +------------TAATGAACGAAAATCTATTTACTTTATTCGCAACCCCAA---CGATTCTAAATCAGCCTGCTACTATCCCCATCATTCTATCCCCCATACTACTAATCCCAACATCCA---AATATCTCATTAACAATCGACTAATCACTATTCAACACAGCCTAACCCAACTTACTCTAAAACAAATAATAATTAACCACAATACTAAAGGACAAACATGATCTCTAATGCTAGTATCCCTAATCACCTTTATTACCATAACTAACCTCCTAGGACTCCTACCCCACTCATTTACACCCACCACCCAACTATCCATAAACCTAGCAATAGCAATCCCCCTATGAGCAGGTACAGTGATCACAGGTCTTCGCTTTAAAACCAAAAATTCCCTGGCCCACCTCCTTCCACAAGGTACACCAACACTACTCATCCCCATGTTGGTAATAATCGAAACTACCAGCCTACTCATTCAACCAGTAGCCCTCGCCGTACGCCTAACTGCTAACATTACAGCTGGTCACCTATTAATGCACTTAGTTGGAAACGCCATGTTAGCACTACTAA---CCATCAACCTCCCTATTGCCTTACTAACCTCCATACTCCTAATACTGCTTACCACCCTAGAAATCGCAGTTGCTCTAATTCAAGCCTACGTATTTACACTTTTAGTCAGCCTCTACTTGCACAACAACA +>Propithecus_edwardsi_isolate_RANO21_NC_026091 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAAC---AATTGTAGGAATCCCTATTGTGATCCTAATCATCGCAATCCCTAGCATTCTCTTCCCTTCACCCAC---CCGTCTCATTTCCAACCGATTGACTTCCTTACAACAATGACTTATTCAACTAGTACTAAAACAACTAATAATGATACACAGCATTAAAGGACGAACTTGGTCCCTTATATTAATTTCACTAATCCTATTTATTGGATCAACCAACTTACTAGGTTTATTACCCCACTCATTCACCCCTACTACTCAACTATCAATGAATCTAGGCATAGCCATCCCACTATGAGCTGCTGCAGTCATTACAGGCTTTCGTCATAAAACAAAAATATCCTTAGCTCACCTACTACCACAAGGAACGCCAGTCCCTCTTATCCCCATACTAGTAATCATCGAAACCATTAGCCTTTTCATTCAACCTATAGCATTAGCCGTACGATTGACAGCTAACATTACAGCAGGTCACCTACTCATACACTTAATTGGTGGAGCCACCTTAGTATTAACCTC---AATTAGTCCCACCACTGCCTCAATTACATTTACTATTCTTATTCTCCTTACAATCCTTGAATTCGCCGTCGCCCTAATCCAAGCCTATGTATTTACTTTACTAGTCAGCCTTTATTTACATGACAACAC +>Eulemur_macaco_macaco_NC_012771 +------------ATGAACGAAAATCTGTTTGCCTCTTTCATTACCCCAACA---ATTGTAGGAATTCCTATCGTCATCTTTATCATTATAATTCCAAGCATTCTCTTTCCCTCCCCTACC---CGCCTAATTAATAATCGACTAACCTCATTACAACAATGATTAATTCAATTAATCCTAAAACAACTAATATTAATTCACAACATTAAAGGACGAACTTGATCACTAATATTGATTTCACTAATCTTATTTATTGGCTCTACTAATTTACTAGGCCTATTGCCTCACTCATTTACTCCTACCACTCAACTATCTATAAATTTAGGCATAGCAATTCCACTCTGAGCAGCTGCGGTAATCAAAGGCTTCCGCCATAAAACAAAGGCATCCCTAGCCCACTTCCTACCCCAAGGAACACCTATTCCTTTAATTCCCATACTAGTTATTATTGAAACCATTAGCCTCTTCATTCAACCTATAGCCCTGGCCGTACGACTAACTGCCAATATTACAGCAGGTCACCTTCTTATGCATCTAATTGGAGGAGCTACCTTAGTTCTTATTTCC---ATCAGCCCTGCCACAGCTTCAATTACATTTATTATTCTCACCCTCCTTACAATTCTTGAACTCGCCGTTGCCCTAATTCAAGCCTATGTATTTACTTTACTAGTCAGCCTTTACTTACACGACAACACC +>Rhinopithecus_brelichi_NC_018057 +------------TAATGAACGAAAATTTATTTACCCCATTCATAACCCCAA---CGATCCTAGGCTTACCCGCTGTAGTACCTATTATTCTATTCCCTACATTATTATTTCCAACCTCCA---AACACCTTATTAGTAATCGACTAATTATTATCCAGCAAAATTTAATCCAACTAATTATAAAACAAATGATAACAATTCATAATACCAAAGGACAAACCTGATCCCTAATACTCATGTCCCTAATTATTTTTATTGCTACAACAAATCTTCTAGGACTCTTACCCCACTCATTTACCCCCACCACTCAACTGTCCATAAATCTAGCTATAGCAATTCCTCTGTGAGCAGGTACAGTAATTACAGGTCTTCGCTTCAAAACTAAAAACTCCTTAGCCCACTTTTTACCACAAGGCACACCTACACCTCTTATTCCCATATTAGTAGTTATCGAAACTATTAGCTTATTTATTCAACCAGTAGCCCTAGCCGTACGCCTAACCGCCAACATCACAGCAGGACATCTGCTAATACACCTAATCGGAAGTGCTACACTAGCACTATTAA---CTGCCAGTTTCCTTGCAACCTCACTAACTTTAGTACTCCTAGTACTATTAACAATTCTAGAAATAGCAGTCGCCCTGATCCAGGCCTACGTTTTTACACTCTTAGTAAGCCTTTATCTACATGATAATA +>Lophostoma_silvicolum_NC_022424 +------------AATGAACGAAAATCTATTCGCCTCTTTCATTACCCCAAC---GATAATAGGTCTCCCTATTGTTACACTAATCATTATATTCCCTACTATACTATTCCCATCAACTAA---CCGACTAATCAACAACCGACTAGTGGCTATCCAACAATGACTAATTTACCTAACATCCAAACAAATACTCTCTATTCACAACCACAAAGGTCAAACGTGAGCCCTAATATTAATATCTCTAATCCTATTTATCGGCTCAACAAACCTATTAGGCCTACTACCACACTCATTTACCCCAACAACACAACTATCAATAAACCTCGGTATGGCAATCCCTCTATGAGCAGGAACTGTAATTCTCGGCTTCCGCCACAAAACCAAAGCCTCTCTCGCCCACTTCCTCCCACAGGGAACTCCTCTTCCCCTAATCCCCATACTAATTGTCATCGAAACAATTAGCCTATTTATCCAACCTATAGCTCTCGCCGTCCGATTAACAGCCAACATCACTGCTGGTCACCTGTTAATTCACCTAATTGGAGGGGCAACACTAGCCCTCATAAG---CATCAGCACAGCCACCGCCCTCCTCACATTCATAGTCCTGATCCTACTAACAATCCTGGAATTCGCGGTAGCTCTAATTCAAGCCTATGTTTTCACACTACTAGTTAGCCTATACCTACACGACAATGC +>Felis_catus_NC_001700 +------------ATGAACGAAAATCTATTCGCCTCTTTCACTACCCCAACA---ATAATAGGATTACCTATTGTTATTTTAATTATTATATTTCCAAGCATTTTATTCCCTTCACCTAAC---CGACTAATTAATAACCGTCTAGTTTCACTCCAACAATGACTAGTACAACTAACATCAAAACAAATACTGGCTATTCATAATCATAAAGGACAAACCTGAGCCCTAATACTAATGTCCCTAATTCTATTTATTGGGTCAACAAACTTATTAGGCCTATTACCCCACTCATTCACCCCAACTACCCAATTATCAATAAATTTAGGAATAGCTATCCCGCTATGAGCCGGCACTGTAATTACCGGGTTTCGCCACAAGACTAAAGCATCTCTGGCCCACTTTCTACCACAAGGAACACCTGTCCCCCTAATTCCTATGCTTGTAGTCATTGAGACTATCAGCCTCTTTATCCAACCTATAGCTCTCGCCGTACGACTTACAGCCAACATCACCGCAGGTCACTTATTAATACATCTAATTGGAGGGGCCGCCCTAGCCCTGATAAAC---ATTAGCACCTCTATTGCCTTAATCACCTTTACCATTCTCATTTTACTAACAATCCTTGAATTTGCCGTAGCCCTAATCCAAGCCTATGTTTTTACCCTGCTAGTAAGCCTATACTTACATGATAACACC +>Papio_hamadryas_NC_001992 +------------TAATGAACGAAAACCTATTTACCTCATTCTCAGCCCCAA---CAATCCTAGGACAACCAGCCACAATCCCCATCATCATATTCCCCACACTACTAATCCCGACCTCTA---AACATCTCATTAACAACCAACTAACCACCGTTCAACAAAACCTCATCAAACTTACCCTAAAACAAATAATAGCACCCCACAACGCTAAAGGACAATCCTGATCTCTAATACTAATATCCTTAATCACCTTTATTACCATGACTAACCTCCTAGGGCTCCTGCCTCACTCATTTACGCCAACCACCCAACTTTCTATAAACCTAGCCATAGCAATCCCCCTGTGGGCAGGCACGATCATCACTGGTCTCCGCTTTAAAACTAAAAACTTCCTAGCTCACATACTACCACAAGGTACACCCACACCCCTTATTCCCATACTAGTGATAATCGAAACCATTAGCCTACTTATCCAGCCAATAGCCCTAGCCGTACGACTGACTGCTAACATCACAGCCGGCCATCTATTAATACACCTAATCGGAAATACTATGCTAACACTATCAA---CCATCAACCTCTCCACCACCCTACTCACTTCTGTACTCCTAATACTACTGACCATTTTAGAGATCGCGGTTGCCCTAATCCAGGCCTACGTCTTCACACTCTTAGTCAACCTGTACCTACACAACAACA +>Vampyrum_spectrum_NC_022429 +------------ATGAACGAAAATTTATTTGCCTCTTTCGCTACCCCTACG---ATAATAGGCCTTCCTATTGTCATCCTAGTCATCATGTTCCCCGCCCTGATATTCCCATCAACCAAC---CGACTAGTCAACAATCGACTAGTGGCTATTCAACAATGACTAATTCGCCTGACATCTAAGCAAATACTGTCCATCCACAACTCTAAAGGTCAAGCGTGAGCCCTCATACTAATATCCCTGATTTTATTTATTGGCTCAACAAACCTACTTGGGCTACTCCCCCATTCCTTCACCCCCACAACACAGCTATCAATAAACCTTGCCATGGCCATCCCACTATGAGCTGGGACCGTAATTCTCGGGTTCCGGCATAAGACAAAAGCCTCCCTAGCACATTTTCTCCCCCAAGGCACTCCTCTTCCCCTGATCCCCATGCTAATTATCATCGAAACAATCAGTCTATTTATTCAGCCCATAGCCCTAGCAGTACGACTAACCGCCAACATCACTGCAGGCCACCTGTTAATTCACTTGGTCGGAGGGGCGACCCTTGCCCTAATAGAC---ATCAACGCAACCGTCGCCCTACTCCCCTTTACAGTACTGGTGCTGCTAACCATCCTAGAATTTGCAGTAGCCCTGATTCAAGCATACGTTTTCACACTGCTAGTCAGCCTATACCTACACGACAACACC +>Gazella_erlangeri_isolate_AWWP_NC_020706 +------------TAATGAACGAAAATCTATTTACCTCTTTCATTACCCCTA---TAATTCTAGGCCTTCCCCTCGTTACTCTAATTGTCTTATTCCCTAGCCTATTATTTCCAACATCAA---ATCGACTAATAAATAACCGTCTTATCTCTCTTCAACAGTGAGTACTTCAACTTGTATCAAAACAAATAATAAGCATCCATAACCCCAAAGGACAAACATGAGCACTTATATTGATATCCTTAATTCTATTTATTGGGTCAACAAACTTACTAGGCCTACTACCCCACTCTTTTACACCAACCACACAACTATCAATAAATTTAGGTATAGCTATCCCCCTATGAGCAGGAGCTGTAATCACGGGCTTCCGCAACAAAACTAAAGCATCACTTGCCCACTTCTTACCACAAGGAACACCCACCCCTCTAATCCCTATACTAGTAATTATCGAAACTATTAGCCTATTTATTCAACCAGTAGCCCTCGCAGTACGATTAACAGCCAATATTACAGCAGGACACCTATTAATTCACCTAATCGGAGGAGCCACATTAGCACTAATAA---ATATTAGCACTACAACAGCTCTTATTACATTTATTATTTTAGTTTTACTAACAATTCTTGAATTCGCAGTAGCTATAATCCAAGCCTACGTATTTACTCTTCTAGTTAGCCTATACCTACACGATAACA +>Inia_geoffrensis_NC_005276 +------------AATGAACGAAAATCTATTTGCCCCCTTCACAGCCCCTAT---AATACTGGGCATTCCTATAACACCACTAATCATTATACTCCCTATTATACTATTTCCAATACCTGA---TCGATTAATTAATAACCGTTTAATCTCCATTCAACAGTGAACAACTAAACTCCTATTAAAACAACTAATAAAAATACACAACCCCAAAGGACAGACCTGAGCTCTAATACTTACTACACTCATCCTATTTATCGCCTCCACTAACCTTCTCGGAATGTTACCCTACTCATTCACACCCACTGCCCAACTTTCAATAAACCTGGGCATGGCCATCCCCCTATGAGCTGGTGCTGTCTCCATAGGTTTTCGTAATAAAACAAAAATATCTCTGGCCCACTTTTTACCACAAGGAACACCTACTCTCCTAATCCCTATACTAGTAATCATCGAGACTATTAGTCTATTCATCCAACCAATAGCACTAGCCGTGCGATTAACTGCCAATATCACAGCAGGCCACCTATTACTGCATCTAATCGGAAGCGCAACTCTTGCATTAACAAA---GATCAGCCTGCTCATAACCCCTATCACATTCACTATTCTTACCTTACTAACTATCCTTGAATTTGCTGTAGCCCTTATTCAAGCCTATGTATTTACCTTACTAGTAAGCCTATACATGCACGATAACAC +>Callicebus_donacophilus_NC_019801 +------------ATGAACCAAAATCTGTTTACCTCATTCAACATCCCAACA---ATTCTAGGAATTCCCCTAATTACATTAATTATCTTATTCCCCACCCTAATAATAACACCCCCCAAT---AAACTAATTAGTAACCGAACTTCCTCACTTCAACAATGACTAATCCAGCTTACACTAAAACAATTAATACTAAATCACAGCACTAAAGGACGAACTTGATCCCTTATACTTCTAACCCTAATTACTTTTATTGCTCTTAACAACCTCCTCGGACTTACGCCCTATGCATTTACACCAACCACCCAGCTATCTATAAATATTGGAATAGCAATCCCCCTATGAACGGCTACAGTACTTATAGGATTCCGATTCAAAACAAAAGCATCTTTAGCCCACTTTTTACCCCAAGGAACTCCAATTCCTCTTATTCCTATACTAGTAATTATTGAAACAATTAGCCTCTTCATTCAGCCAATAGCACTAGCCGTCCGTTTAACAGCTAATATCACAGCAGGACATCTACTAATGCACCTTCTTGGGGACACCGCACTAACTCTAGCATCT---ATTTATTTCTCCTCATCTATAATTACTGTTATTGTAATTATTCTTCTAATTACCCTAGAACTAGCTGTAGCCTTAATTCAAGCCTACGTCTTTACACTTCTAGTTAGCCTATACCTACATGATAACTCT +>Globicephala_melas_NC_019441 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATAGTCCCAA---TCACACTAGGCATTCCCATCACCACTCTAATTATTATATTTCCCACCATACTATTCCCAACACCAA---ACCGATTAATCAATAACCGTATAATTACTATCCAACAATGACTTACCAAACTCACATCAAAACAACTGATAGTGACACATAATCCCAAAGGACAAACCTGATCTCTAATACTCATCTCGCTTTTCCTTTTCATCGCCTCCACAAACCTTCTTGGAATGTTACCTCACTCATTCACACCTACTGCTCAACTCTCTATAAACTTAGGCATAGCCATTCCATTATGAGCTGGTACCGTCTTTATCGGTTTCCGTAATAAAACAAAAATATCTCTAGCCCACCTTTTACCATTAGGCACACCCATTTTCCTAATTCCTATGCTGGTAATAATCGAAACTATCAGCCTATTTATTCAACCCTTAGCTCTAGCAGTACGACTAACAGCGAACATCACAGCAGGTCACCTATTATTACACCTAATTGGAAGTGCAACTCTTGCATTAATAA---GCATTAGCCTATTCACAGCTCTCATCACATTTATTATCCTCACTCTATTAGTCATCCTCGAATTCGCTGTAGCCCTGATCCAAGCCTACGTATTCACCCTACTAGTAAGCCTATACTTGCAAGACAATA +>Apodemus_latronum_NC_019585 +------------AATGAACGAAAATTTATTTGCCTCTTTCATTACCCCTTC---AGTAATAGGATTACCAATTGTAATCACCATTATCATATTTCCATCAATCCTATTTCCATCATCAGA---ACGCTTAATTAATAACCGCCTTCACTCATTCCAACACTGACTAATTAAACTTATCATCAAACAAATAATGCTAATTCACACCCCAAAAGGACGTACTTGAACTCTAATAATTGTATCCCTAATTATATTTATTGGATCCACAAACCTCCTAGGACTACTCCCACATACATTCACACCAACCACTCAACTATCAATAAACCTCAGCATAGCTATTCCACTATGAGCAGGAGCTGTTCTACTAGGATTCCGCCACAAACTAAAAAGCTCCTTAGCCCATTTCCTTCCACAAGGTACTCCAATTTCACTTATTCCTATACTAATTATCATTGAAACAATTAGCCTTTTTATTCAACCAATAGCTCTAGCAGTCCGACTTACAGCAAACATCACAGCAGGCCACCTACTAATACACCTAATCGGAGGAGCAACTCTAGTACTTATAAA---CATTAGCCCACCAACCGCTACCATCACATTTATTATTCTTCTACTTCTTACAGTACTAGAATTTGCTGTAGCCCTAATTCAAGCATATGTATTTACACTTCTAGTCAGCCTATATCTACATGATAACAC +>Addax_nasomaculatus_isolate_VZ_NC_020674 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTATA---ATTCTAGGCCTTCCCCTTGTTACCCTAATCGTCTTATTCCCTAGCTTACTGTTTCCTACATCAAAC---CGACTAATCAACAACCGCCTCATCTCTCTCCAACAATGAATACTCCAACTTGTATCAAAACAAATAATAAGTATTCACAATGCCAAAGGACAAACATGAACGCTAATACTAATATCCCTGATTCTATTCATTGGATCAACAAACTTACTAGGCCTACTACCCCACTCATTTACACCAACCACACAACTGTCAATAAATTTAGGCATGGCTATCCCTCTATGAGCAGGAGCTGTTATTACAGGCTTCCGTAACAAAACTAAAGCATCACTTGCCCATTTCTTACCACAAGGTACACCAACCCCACTAATTCCAATGCTAGTAATTATCGAGACTATTAGCCTTTTTATTCAACCAATAGCCCTTGCTGTACGACTAACAGCCAATATCACAGCAGGACACCTATTAATTCATTTAATCGGAGGAGCCACCCTAGCACTAATAAGC---ATTAGCACCACAACTGCCTTTATTACATTTATTGTCCTGATTCTACTAACAATTCTCGAGTTCGCAGTAGCTATAATTCAAGCCTACGTATTTACCCTCTTAGTCAGCCTATACTTGCACGATAACACG +>Capra_caucasica_isolate_MA4105_NC_020683 +------------TAATGAACGAAAATCTATTTACCTCTTTTATTACCCCTA---TAGTATTAGGCCTCCCCCTTGTTACCCTTATTATTTCATTTCCTAGCTTACTATTTCCCTCATCAA---ACCGACTAATTAACAACCGCCTCATCTCTCTCCAACAATGGGCACTCCAACTCGTATCAAAACAAATAATAAGTATTCATAACACCAAAGGACAAACATGAACATTAATATTAATGTCCCTAATCCTATTTATTGGATCTACAAACCTACTAGGCCTTCTACCCCACTCATTTACACCAACTACACAACTATCAATAAACCTAGGCATGGCTATCCCCTTATGAGCAGGGGCCGTAATCACAGGTTTTCGCAACAAAACTAAAGCATCACTTGCCCATTTCCTACCACAAGGAACGCCCACACCACTAATCCCAATGCTAGTAATTATTGAAACCATTAGCCTCTTTATTCAACCAATAGCCCTCGCCGTACGACTGACAGCCAACATCACAGCAGGACACTTATTAATCCACTTAATCGGAGGAGCCACCCTTGCACTAACAA---ACATCAGTCCCACAACAGCACTCATTACATTTATTATTCTAATTCTACTAACAATTCTCGAATTCGCAGTAGCCATAATCCAAGCCTACGTATTTACTCTCCTAGTCAGCCTATACCTGCACGACAACA +>Rattus_sordidus_NC_014871 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAAC---AGTAATAGGTCTACCAATTGTCGTAACCATCATTATATTCCCATCAATTCTATTTCCATCATCAGA---GCGCCTAATTAGCAATCGTCTTCACTCATTTCAACACTGACTAATTAAACTTATTATCAAACAAATAATATTAATTCATACACCAAAAGGACGAACCTGAGCACTAATAATTGTATCACTAATTATATTTATTGGCTCAACTAACCTCTTAGGCCTACTTCCCCATACATTTACCCCTACCACTCAACTGTCCATAAACCTAAGCATAGCCATTCCCCTATGAGCAGGCGCCGTAATTTTAGGATTCCGACACAAACTAAAAAGTTCTTTAGCCCACTTCCTACCACAAGGAACACCCATTTCACTCATTCCCATACTAATTATTATCGAAACCATCAGCTTATTTATTCAACCAATAGCACTAGCAGTACGACTAACAGCAAATATCACAGCAGGCCACCTATTGATACACCTAATTGGAGGAGCTACTTTAGTACTCATGAA---CATCAGCCCACCAACCGCCACAATTACATTTATTATCCTTCTTCTACTTACAATGCTCGAATTCGCCGTAGCCTTAATTCAAGCCTATGTATTTACTCTCCTAGTAAGCCTGTACCTACATGATAACAC +>Thryonomys_swinderianus_NC_002658 +------------ATGAACGAAAACTTATTCTCCTCTTTCATAACACCTTCA---CTGATTGGTATCCCAATAATTACAATAATCATCTTATTCCCAACTATCCTATTCCCAACACCTAAT---CGCCTAATTAACAACCGTTTAATCTCACTACAACAATGACTAATAAACCTAGTATTAAAACAAATAATAACAATGCATACCCCGAAAGGACGAACCTGATCACTAATACTAATGACACTAATCATATTTATTGCTTCAACCAACCTACTTGGACTATTACCACATTCATTTACACCAACTACACAACTATCAATAAACTTAGGTATAGCAATCCCTTTATGATTCGCTACAGTAGTTCTAGGTTTTCGACATAAAGCAAAAAAATCACTCGCCCATTTTCTTCCTCAAGGAACACCTATCCCATTAATCCCTATACTCATTATTATTGAAACAATTAGCCTTTTTATTCAACCAGTAGCCTTAGCTGTACGACTAACAGCTAACATCACTGCAGGCCACTTATTAATTCACCTAATTAGCGCTGCAACATTAACACTAATATCT---ATTAACTTTCCTACCGCTACAATCTTATTTACTATTCTTATTCTACTTACTATCCTTGAACTAGCCGTAGCAGTAATCCAAGCATATGTATTTACACTTCTTGTCAGCCTATATCTACATGACAATACA +>Ursus_thibetanus_NC_009971 +------------TAATGAACGAAAATCTATTCACCTCTTTTATTACCCCGA---TAATAGTGGGGGTTCCCATTGTAGTCTTAATCGTTATGTTTCCGAGCATTTTATTCCCTTCTCCCA---GTCGACTGATCGACAATCGCTTAGTGTCTATTCAACAATGACTAGTCCGGCTAACATCAAAACAAATGCTATCCATTCATAATCGTAAAGGGCAAACCTGAGCACTAATGTTGATATCCCTAATCCTATTTATTGGCTCAACTAATCTTCTGGGTCTATTGCCACACTCATTCACACCTACCACGCAACTGTCAATGAATCTGGGAATGGCCATTCCCTTGTGAGCAGGTACAGTTGCCACTGGATTTCGATATAAGACCAAAGCATCCTTGGCTCACTTTCTACCTCAAGGAACACCTTTCCCTCTAATCCCTATACTTGTTATTATCGAAACAATCAGTCTATTCATCCAACCTATGGCCTTAGCCGTACGATTAACTGCTAATATTACTGCAGGTCACTTGCTCATCCATTTAATTGGAGGGGCTACTCTAGCTCTAACAA---GTATTAGCACTATTACAGCCCTCATCACCTTTACTATTCTAGTGCTACTTACTATTCTCGAGTTTGCTGTAGCCCTCATTCAGGCCTACGTCTTTACCCTGCTAGTAAGCCTATACTTACACGATAACA +>Equus_ovodovi_isolate_ACAD2304_NC_018783 +------------AATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCAAC---AGTAATAGGCCTCCCTATTGTAATTCTAATCATCATATTCCCCAGCATCCTATTCCCTTCATCCAA---CCGACTAATCAACAATCGCCTAATCTCAATTCAACAATGGCTAGTCCAACTTACATCAAAACAAATAATAGCTATTCACAACAACAAAGGACAAACCTGAACCCTCATACTCATGTCACTAATCCTATTCATTGGCTCGACAAACTTATTAGGCCTACTACCTCACTCATTTACACCAACAACACAACTATCAATAAATCTAGGTATAGCCATTCCCCTGTGAGCAGGAACAGTATTCATAGGCTTCCGTCATAAAACAAAAGCAGCCCTAGCTCACTTTCTGCCTCAAGGAACACCCATTTTCCTCATTCCCATGCTAGTAATTATTGAGACTATCAGCCTATTTATTCAACCTGTGGCTCTAGCCGTACGGCTAACTGCTAACATTACTGCCGGACATCTTCTAATTCACCTTATCGGAGGAGCAACACTAGCCCTCATAAA---TATTAGCCCCTCAACAGCCCTTATTACATTTATTATCCTAGTTCTGCTGACTATCCTCGAATTTGCAGTAGCCATAATCCAAGCCTACGTATTCACTCTTCTAGTAAGCCTCTACCTACATGATAACAC +>Tarsipes_rostratus_NC_006518 +------------ATGAACGAAAATCTATTTGCCCCATTCATCACCCCTACG---ATCATAGGTATTACAACTCTGCCAATTATCATAACTTTCCCATGCTTAATACTCAGCTCTCCCAAA---CGCTGACTACCTAACCGCATCCAAGTTTTACAAATCTGACTAATCCGATTAATCACAAAACAAATAATAGCTATACATAATATTCAAGGACGTTCTTGAACTTTAATACTTATGTCATTAATCCTATTTATTGGTTCAACTAACCTCCTGGGTCTCCTACCATACTCATTTACCCCTACAACACAACTCTCTATGAATATTGGCATAGCAATCCCACTTTGAATGGGTACAGTAGTAATAGGTTTCCGAAATAAACCTAAAGCTTCATTAGCACATTTCCTTCCACAAGGAACACCAACCCCTCTAATCCCTATACTAATTATCATTGAAACCATTAGTCTATTTATTCAACCATTAGCACTAGCTGTCCGACTGACAGCCAACATTACCGCAGGACACCTCCTAATTCATCTCATTGGATCAGCTACATTAGCCCTATCTTCC---ATCAGCATAACCGTATCAATAATCACATTCTCTATTCTCCTCCTACTAACCATTCTTGAATTAGCCGTTGCCATAATTCAAGCTTATGTTTTTACACTACTAGTAAGCCTCTACTTACATGATAACACC +>Cacajao_calvus_NC_021967 +------------ATGAACCAAAATCTATTTGCCTCTTTCAACATCCCCATT---ATCTTAGGAATTCCTATAGTTACACTAGTAATTCTATTTCCCACCATACTACTAATACCTCCCAAC---AACTTAATCAACAACCGACTATCTTCTATCCAACAATGACTAATTCAACTTACACTAAAACAAATGATAATTACCCATAGTACAAAAGGACGGACTTGATCTCTTATGCTACTGGCACTAATTACCTTTATCGCCCTAAATAATCTACTCGGAATAACACCCTATGCATTTACACCAACCACTCAGCTATCGATAAACCTAGGCATAGCAATTCCTCTGTGAGCAGCTACTGTGCTTGTAGGACTTCGATTTAAAACAAAATCATCCTTAGCCCATCTCTTACCCCAAGGAACTCCTACCCTACTAATTCCCATTCTAATTATTATTGAAACAATTAGCCTCTTCATCCAACCAATAGCACTAGCCGTACGATTAACAGCCAACATTACAGCAGGTCATCTACTAATACATTTACTTGGAAGCACCTCACTAACTCTACTATCC---ATTTACTTATCCTCATCCCTAATTACTATTATTGTTATTATCCTACTAATCACCCTAGAACTAGGCGTAGCCCTGATTCAAGCATATGTCTTTACACTTCTAGTAAGCCTCTACCTGCATAATAACTCC +>Equus_zebra_hartmannae_isolate_H21_NC_018780 +------------TAATGAACGAAAATTTATTCGCCTCTTTCGCTACCCCAA---CAATAATAGGCCTCCCTATTGTAATTTTAATTGTCATATTCCCCAGCATCCTATTCCCTTCATCCA---ACCGACTAATCAATAACCGCCTAACCTCAATTCAACAATGACTAGTCCAACTTACATCAAAACAAATAATAGCCATCCACAACAGCAAAGGACAAACCTGAACCCTCATACTCATATCGCTGATCCTATTCATTGGCTCAACAAACTTACTAGGTTTATTACCTCACTCATTTACACCAACAACACAACTATCAATAAACCTAGGCATAGCCATTCCCCTGTGAGCAGGAACAGTATTCATAGGCTTTCGTCATAAAACAAAAGCAGCCCTAGCCCACTTTCTGCCTCAAGGAACACCTATTTTCCTCATTCCCATGCTAGTAATTATTGAAACTATCAGCCTATTTATTCAACCTGTGGCCCTAGCCGTTCGGCTAACTGCTAACATTACTGCCGGACATCTTCTAATTCACCTCATCGGAGGAGCGACGCTAGCCCTCATAA---ATATTAGCCCCTCAACAGCCCTTATTACATTTATTATCCTAATTCTACTGACCATCCTCGAATTCGCAGTAGCCATAATCCAAGCCTACGTATTCACTCTCCTAGTAAGTCTCTACCTACATGACAACA +>Lama_pacos_NC_002504 +------------AATGAAAGAAAATTTATTTGCCTCTTTTATTACCCCAAC---AATAATAGGACTTCCTATTGTTACCCTTGTTGTCATATTCCCAAGTATATTATTCCCAACCCCCAC---CCGACTAATTAATAACCGCTTAATCTCTTTTCAACATTGGCTAATTCGACTCACGTCTAAGCAAATAATAACTATTCATAATTACAAAGGACAGACCTGGTCCTTAATGCTAATATCTCTAATTATATTTATTGGGGCTACTAACCTTCTAGGACTCCTTCCGCACTCATTTACCCCTACCACACAACTATCAATAAACTTAGGCATAGCAGTTCCTCTATGAGCTGGGACTGTAGTTACTGGCTTCCGCAATAAAACGAAAGCATCACTAGCACATTTCCTCCCCCAAGGAACACCTACACCACTAATCCCCATACTAGTAATTATCGAAACTATCAGCCTGTTCATTCAACCCGTAGCCCTGGCCGTTCGACTAACAGCTAATATCACAGCAGGCCATTTATTAATGCACCTAATTGGAGGAGCTACCCTAGCCCTAATAAA---TATTAGTACACTAACAGCCCTCATCACCTTTGTAGTCCTAATTTTACTTACAATTCTCGAATTTGCCGTAGCTATAATTCAAGCCTATGTTTTCACCCTACTAGTAAGCCTATACCTACATGACAATAC +>Thylamys_elegans_NC_005825 +------------ATGAACGAAAATTTATTTGCCCCATTCATCACACCAACC---ATTATAGGTATTACAACCTTACCACTCATTATTCTACTTCCATGTGTTATACTATCTTCCCCAAAA---CGATGATTACCGAATCGGATTCAAATTCTACAAATTTGATTAATTCGCTTAATTACTAAACAAATAATGACAATACATAACAAACAAGGTCGAACCTGATCCCTCATACTAATATCCCTAATCCTATTTATTGCTTCTACTAATCTCTTAGGCCTCTTACCCTACTCATTTACACCAACAACTCAACTCTCAATGAATATCGGTATAGCTATCCCACTTTGAGCCGGAACGGTAATTATAGGCTTTCGAAATAAACCTAAAATATCACTAGCGCACTTCTTACCCCAAGGCACACCAACTCCGCTAATTCCTATACTTATTATTATTGAAACAATCAGCCTGTTTATCCAACCTTTAGCCTTAGCAGTACGACTCACAGCCAACATTACCGCAGGCCACCTCCTAATCCATCTGATTGGTTCAGCTACGCTAGCTCTCTCTTCC---ATTAGTATAACCGTATCAACTATCACATTCTCTATCCTATTCCTCCTTACAATCTTAGAGTTAGCAGTAGCAATAATCCAAGCCTATGTCTTTACCCTTCTAGTTAGCCTTTATCTTCATGATAATTCA +>Allenopithecus_nigroviridis_NC_023965 +------------TATGAACGAAAATTTACTTACCCCGTTTACAGCTCCGAC---AATTCTAAATCAACCTGCTACAATCCCCATTATCCTATTCCCCATACTACTAATCCCAACCTCTAA---CCACCTAATCAATAATCGACTAATTACTATTCAACATAATTTAATCCAACTCACCCTGAAACAAATAATAATAATTCACAATGTCAAAGGAAAAACTTGATCTCTAATACTAACATCTTTAATTATCTTTATCACCACAACAAACCTCTTAGGACTCCTACCTCACTCATTCACACCTACTGCCCAACTATCCATAAACTTAGCCATAGCAATCCCCCTATGAGCAGGCACAGTAATTACAGGCCTTCGCTTCAAAACCAAAAGCTCCCTAGCCCATCTTTTACCACAAGGTACTCCAATACCACTCATCCCCATACTAGTAGTAATTGAGACTATCAGCCTACTCATTCAACCACTAGCCCTTGCTGTACGTCTAACCGCCAACATTACAGCTGGCCACCTGTTAATGCACCTAGTTGGAAGCGCTGTAATAGTACTATCAAC---CATTAACTTCCCCACTACCTTGCTAATTTTTATACTCCTAACGCTACTTACTATTTTAGAAATCGCAGTCGCTCTAATTCAAGCCTATGTTTTTACACTTCTAATTAGTCTCTACCTGCACAACAACAC +>Bubalus_depressicornis_NC_020615 +------------ATGAACGAAAATCTATTTACCTCTTTCATCACCCCTATA---ATTCTAGGCCTCCCCCTCGCAACTCTTATCGTACTATTCCCCAGTTTACTGTTCCCAACTCCAAAT---CGACTAGTAAGTAACCGCCTCATTTCCCTCCAACAATGAATACTTCAACTTGTATCAAAACAAATAATGGGTATCCACAATACCAAAGGACAAACATGAACATTAATACTAATATCCTTAATTTTATTTATTGGATCAACAAATCTACTGGGTCTACTACCCCACTCATTCACACCAACTACACAACTATCAATAAATCTAGGCATAGCCATCCCCCTATGAGCAGGCGCCGTAGTTACAGGCTTCCGCAACAAAACTAAAGCATCGCTCGCCCATTTTCTACCACAAGGAACACCAACCCCATTAATCCCAATGCTAGTTATCATCGAGACTATCAGCCTTTTTATTCAACCAGTGGCCCTCGCCGTACGACTAACAGCCAACATTACTGCAGGACACCTGTTAATTCATCTAATTGGAGGAGCTACACTTGCACTGATAAGC---ATTAGTGTAACAACAGCTCTCATTACATTCATCATCTTAATCCTACTTACAATTCTAGAATTTGCAGTGGCTATAATCCAAGCCTACGTATTCACCCTCCTAGTCAGCTTATATCTGCACGACAACACA +>Equus_hemionus_kulan_isolate_Ehemionus_NC_018782 +------------TAATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCAA---CAATAATAGGCCTTCCTATTGTAATTCTAATCATCATATTCCCCAGCATTCTATTCCCCTCATCCA---ACCGACTAATCAACAATCGTCTAATCTCAATTCAACAGTGGCTAATCCAACTTACATCAAAACAAATAATAGCTATTCACAACAACAAAGGACAAACTTGAACCCTTATACTCATGTCGCTGATCCTATTTATTGGCTCAACAAACCTATTAGGCCTACTACCCCACTCATTTACACCAACAACACAACTATCAATAAACCTAGGCATAGCCATTCCCCTGTGAGCAGGAACAGTATTCATAGGCTTTCGTCATAAAACAAAAGCAGCCCTAGCCCACTTTCTGCCTCAAGGAACACCCATTTTCCTCATTCCCATGCTAGTAATTATTGAAACCATCAGCCTATTTATTCAACCTGTAGCCCTAGCCGTACGGCTAACCGCTAATATTACTGCCGGACATCTTCTAATCCACCTTATCGGAGGAGCAACGCTAGCCCTCATAA---ACATTAGCCCCTCAACAGCCCTTATTACATTCATTATCCTGATTCTGCTAACTATCCTCGAATTCGCAGTAGCCATAATCCAGGCCTACGTATTCACTCTCCTAGTAAGTCTCTACCTACATGATAACA +>Rusa_alfredi_isolate_CYTO_NC_020744 +------------AATGAACGAAAATCTATTTACCTCTTTTATTACCCCAAT---AATTCTAGGCCTTCCACTTGCAACCCTCATCGTTATATTCCCTAGCCTATTATTTCCAACATCAAA---TCGTCTAGTAAATAATCGTCTTATTTCCCTCCAACAATGGATAATTCAACTTGTATCAAAACATATAATAGGAATTCACAATGCCAAGGGGCAAACATGAACACTAATACTCATATCTCTAATTTTATTTATTGGGTCCACAAATCTTCTGGGCTTATTACCCCACTCATTTACACCAACCACACAATTATCAATAAATCTAGGCATAGCCATTCCCCTGTGAGCAGGAGCCGTAATCACAGGTTTCCGCAATAAAACTAAAGCATCACTTGCTCACTTTCTTCCACAAGGAACTCCAACCCCATTAATCCCCATACTAGTCATCATCGAAACTATTAGTCTTTTTATTCAACCAATCGCCTTAGCCGTACGACTAACTGCTAACATTACTGCAGGACACCTACTAATTCACCTAATTGGAGGAGCTACACTTACACTAATAAG---TATTAGTACTACATTAGCTCTTATCACATTTATTATTCTAGTCCTACTCACAATTCTTGAGTTTGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTTCTAGTTAGCCTTTACTTGCATGACAACAC +>Tetracerus_quadricornis_NC_020788 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTATA---ATCTTAGGCCTTCCCCTTGTAACCTTAATCGTCTTATTCCCTAGCCTATTATTTCCCACCTCCAAT---CGACTAATAAACAACCGCCTTATTGCCCTCCAACAATGAATCCTCCAACTTATCTCAAAACAAATAATGAGTATTCATAACACCAAAGGACAAACATGAACATTAATACTAATATCCCTGATCTTATTTATTGGATCAACAAACCTATTAGGCCTTCTACCCCACTCTTTTACACCAACCACACAACTATCAATAAATCTAGGCATAGCTATCCCCTTATGAGCAGGAGCCGTATTTACAGGTTTTCGCAACAAAACTAAAGCCTCACTTGCCCACTTCCTACCACAAGGAACACCAACCCCTCTAATCCCAATACTAGTTATCATCGAAACTATCAGCCTTTTTATTCAACCAATTGCCCTTGCCGTGCGATTAACAGCTAATATCACTGCAGGTCACCTATTAATTCACCTAATTGGGGGAGCTACACTCGCACTTATAAAC---ATTAGCACTACAACAGCCCTCATTACATTTATTATTTTAGTCCTATTAACAATTCTCGAATTTGCAGTAGCCATGATTCAAGCCTATGTATTCACACTTCTAGTCAGCCTATATCTGCATGATAATACA +>Anourosorex_squamipes_NC_024563 +------------TAATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCTA---CAATAATAGGTCTTCCTATTGTAATTTTAATTATTATATTCCCCAGCATTATATTTCCAACACCTA---ATCGCCTTATTAATAACCGATTAGTAACCTTTCAACAATGACTAATTCAACTAATTTCCAAACAAATAATAGCAATTCATAATCAGAAAGGACAAACATGAACACTAATACTCATTTCTCTCATCTTATTTATTGGTTCAACCAACCTTCTAGGTCTACTCCCCCACTCATTTACACCTACAACACAACTATCAATAAATCTAGGAATAGCTATTCCACTATGAGCCGGAGCAGTAGTAACAGGATTCCGATATAAAACTAAAGCCTCACTAGCCCATTTCCTACCTCAAGGTACCCCACTTCCTCTTATTCCAATACTAATTATTATCGAAACTATCAGTCTATTCATTCAACCAATAGCACTAGCAGTACGACTCACAGCCAACATCACAGCAGGTCACTTATTAATTCATCTTATTGGAGGCGCTACTCTAGTATTAATAA---GTATTAGTCCCTTAACAGCCTTCATCACATTTATCATTTTAGTAATACTTACAATTCTTGAATTCGCTGTAGCATTAATTCAAGCTTACGTATTTACTCTCCTAGTAAGCTTATACTTGCATGATAACA +>Rhinolophus_formosae_NC_011304 +------------AATGAACGAAAATCTATTCGCCTCTTTCATTACCCCAAC---GATAATGGGCCTACCCATTGTTATTTTAATCATCATATTCCCCACTATCCTATTTCCCACAACAAA---CCGACTAATCAGCAACCGCCTAGCCGCCATCCAACAATGACTAATTCACATAACATCTAAACAAATAATAACCATTCACAACCCTAAAGGCCAAACCTGAGCCCTAATACTAATATCCCTTATTCTATTTATCGGCTCAACAAACCTGTTGGGACTTTTACCCCACTCCTTCACACCAACTACCCAATTATCTATAAACCCAGACATGGCCATCCCCCTGTGAGCCGGGACCGTTATTCTAGGCTTTCGCCACAAGACAAAAGCTTCCCTAGCCCACTTTTTACCTCAAGGAATCCCTCTGCCCCTAATTCCTATACTAGTAATCATTGAAACTATCAGCCTATTCATTCAACCTATACCCCTTGCCGGACGGCTAACTGCGAATGTTACTACCGGACATCTCTTAATTCTCCTCATCGGCCGTGCCCCACTGGCCCTATTAAT---TATTAACATGGCTACTGCCTTGGTTACATTCGTTATTCTCGTCCTGCTAACAATCTTAAAATTCGCCGTCTCCCTAATCCAAGCCTATGTATTTACACTACTGGTAAGTCTTTACCTACACGACAATAC +>Anoura_caudifer_NC_022420 +------------ATGAACGAAAATCTATTCGCCTCTTTCATTACCCCTACA---ATAATAGGACTTCCTATTGTCGTCCTTATTATTATATTTCCCACTATACTATTTCCATCAACTAAC---CGACTAATCAACAATCGGTTAGTCGCTATTCAACAATGATTACTCCACCTAACATCTAAGCAAATACTTTCTATCCACAACAATAAAGGCCAAACATGAGCCCTAATATTAATGTCCTTAATTTTATTCATTGGGTCTACAAACCTACTAGGACTACTCCCCCATTCCTTTACTCCAACAACCCAACTATCAATAAACCTTGGTATAGCCATTCCACTATGAGCCGGAACTGTTATTCTTGGTTTCCGACACAAAACCAAAGCCTCTTTAGCACACTTTCTACCACAAGGTACTCCCCTACCCTTAATTCCTATACTAATTATTATCGAGACTATTAGTTTATTTATTCAACCCATGGCACTAGCCGTACGATTAACCGCCAACATTACCGCTGGTCACCTATTAATTCACCTAATTGGTGGAGCCACTCTTGCTTTAATAAGT---ATCAGTACAGCTACTGCCCTGATTACATTTATCATTTTAATATTACTTACAATTCTAGAATTCGCCGTGGCCCTAATTCAAGCCTACGTTTTTACATTATTAATCAGCTTATACCTACATGATAATGCC +>Gulo_gulo_NC_009685 +------------TAATGAACGAAAATCTATTCTCCTCTTTCATTACCCCTA---CAATAATAGGACTCCCTATTGTTATTCTTATCACCATGTTCCCAGGCATTATATTCCCCTCACCGA---GTCGATTAATCAATAACCGACTCATCTCCATCCAACAATGATTAGTTCAACTAACATCAAAACAAATACTATCTGTTCACAACCAAAAGGGACAAACCTGAGCACTAATATTAATGTCCTTAATCCTATTTATTGGGTCTACCAATCTCTTAGGCCTTCTGCCCCATTCATTTACTCCCACTACCCAACTGTCTCTAAATCTAGGCATGGCCATCCCCCTGTGAGCGGGTACGGTAGTCACCGGTTTTCGATACAAAATAAAGGCATCCTTAGCCCACTTTCTACCACAAGGAACACCCCTACCTCTGATCCCAATACTTGTAATCATTGAGACCATTAGCCTTTTTATCCAGCCCATAGCCTTAGCTATTCGACTAACAGCCAACATCACCGCAGGTCACTTATTAATCCACCTGATCGGTGAAGCCACCTTGGCTTTAACAA---GCATCAGCACCATTACCGCTATAGTAACTTTTATTATCCTTATTCTCCTAACCATCTTAGAATTTGCAGTGGCCCTTATTCAAGCTTACGTTTTTACTTTACTAGTAAGCTTATACCTACATGATAACA +>Mazama_rufina_isolate_MRGMr4_NC_020721 +------------AATGAACGAAAATTTATTTGCCTCTTTCATTACCCCAAT---AGTTTTAGGCCTTCCACTTGCTACTCTAATCGTTATTTTTCCTAGCCTGTTGTTCCCAACATCAAA---TCGTCTAGTAAATAACCGTCTTATTTCTCTCCAACAATGAATAATTCAACTTGTATCAAAACAAATAATAGGAATTCACAACATCAAAGGACAAACATGAACATTAATATTAATATCCTTAATTATATTTATTGGATCAACCAACCTTCTAGGTCTATTACCTCACACATTTACACCAACCACACAGCTGTCAATAAACTTAGGTATAGCTATTCCCCTATGAGCAGGAACCGTAATTATAGGTTTCCGTAATAAAACCAAAGCATCACTTGCCCATTTTCTTCCACAAGGAACACCCACTCCATTAATCCCCATACTAGTTATTATCGAAACTATTAGCCTTTTTATTCAACCAGTTGCCTTAGCTGTACGATTAACAGCTAATATTACTGCAGGACATCTACTAATTCACCTAATTGGAGGAGCCACACTTGCACTAATAAA---TATTAGCACTACAATAGCCCTTACTACGTTTATTATTCTAGTTCTACTCACAGTTCTCGAGTTCGCAGTAGCCATAATTCAAGCTTACGTATTTACCCTTTTAGTAAGCCTCTACTTACATGACAACAC +>Arctocephalus_pusillus_NC_008417 +------------ATGAACGAAAATCTATTCACCTCTTTCACTTCCCCTACA---ATAATAGGCCTCCCCATCGTGACCCTAGTTATCCTATTTCCAAGTATATTATTTCCTTCACCAGGC---CGACTAATCAATAACCGCTTCACCTCTATTCAACAGTGATTGATCCAATTGACATCAAAACAAATAATAATAATTCATAATCACAAAGGACAGACATGGACATTAATACTTACATCGCTCATTATGTTTATTGCATCTACTAATCTACTGGGTCTACTACCGCACTCATTTACTCCCACTACCCAACTGTCTATAAACCTAGGAATAGCCATCCCCTTATGAGCAGGAACAGTTGCTATAGGGTTACGACACAAAACCAAAGCATCCTTAGCTCACTTCCTACCCCAAGGAACACCCTCCCCCCTCATCCCAATATTAGTAATCATCGAATCCATTAGCCTACTCATTCAACCCATAGCCCTAGCCGTACGACTAACAGCCAACATCACTGCAGGTCACCTATTAATTCACCTAATCGGTGGAGCCACTCTAGCCCTCACTAAT---ATCAGCATAATTACGGCCCTTATCACTTTCATTATTCTCATCCTACTCACGATCCGCGAATTTGCTGTAGCCTTGATCCAAGCCTACGTATTCACTTTACTAGTAAGCCTATACTTACACGATAACACC +>Spilogale_putorius_NC_010497 +------------TAATGAACGAAAATCTATTCACCTCTTTCACTACCCCAA---CAATAATTGGGCTACCAATTGTTGTCATTATCATTATATTTCCCAGTATTTTCTTTCCCTCACCCA---ACCGACTAGTTAACAATCGACTTATTTCAATCCAACAATGACTAGTCCAATTAATATCGAAACAAATACTATCAATTCATAATAACAAAGGACAAATTTGAGCCTTAATATTAATGTCCCTTATCTTATTTATTGGGTCAACTAACCTCCTAGGCCTACTACCACACTCATTCACTCCAACTACACAACTATCTATAAACCTGGGTATAGCTATTCCACTATGAGCTGGCACAGTTCTAACTGGCCTTCGCCATAAAACAAAAGCATCTTTAGCCCATTTTTTACCCCAAGGAACACCCGTTCTCCTAATCCCGATACTTGTAATTATTGAAACCATCAGCCTATTTATTCAACCTATAGCATTAGCTGTACGATTAACAGCCAATATTACTGCAGGCCATCTGTTAATTCATCTTATTGGAGGGGCTACTTTAGCCCTGATAA---ATATCAGCACTACAACAGCCTTAATCACTTTTATCATTCTAATTCTTCTTACCATTCTAGAATTCGCCGTAGCTCTAATTCAAGCCTACGTGTTTACCCTCTTAGTAAGCCTATACCTACATGACAACA +>Giraffa_camelopardalis_isolate_Waza_NC_024820 +------------AATGAACGAAAATCTATTTGCCTCTTTCATCATCCCTAC---ATTTTTAGGTCTTCCTATCGTTATCCTTATCGTTATATTTCCTAACCTGCTATTCCCAACATCTAA---TCGTCTAACAAACAACCGCCTCATCTCCCTGCAACAATGAACACTCCAACTCATATCAAAACAAATAATAAACATCCATAACACCAAAGGACAGACATGGACCCTAATACTAATATCTCTAATTCTATTTATTGGAACAACCAATCTACTGGGCCTGTTTCCCCACTCATTTACACCAACTACACAATTATCGATAAACTTAGGCATAGCCATTCCTCTATGAGCAGGAGCCGTAGCTACAGGCTTCCGCAACAAAACCAAAGCATCACTCGCTCACTTTTTACCACAAGGAACACCAACCTTACTAATCCCAATGTTAGTCATCATTGAAACTATCAGTCTATTTATTCAACCAATAGCTCTAGCCGTACGACTAACAGCCAATATCACTGCCGGACACCTACTAATTCACTTAATTGGAGGAGCCACACTCGCACTGATAAA---CATTAGTACTATAACAGCTCTCATCCCATTTGTTGTCTTAATTTTACTAACAATCCTTGAATTTGCAGTAGCTATAATTCAAGCCTACGTATTCACCCTCTTAGTTAGCCTGTATTTGCACGACAACAC +>Ursus_thibetanus_ussuricus_NC_011117 +------------ATGAACGAAAATCTATTCACCTCTTTTATTACCCCGATG---ATAATGGGGGTTCCCATTGTAGTCTTAATCGTTATGTTTCCGAGCGTTTTATTCCCTTCTCCCAGT---CGACTGATCGACAATCGCTTAGTGTCTATTCAACAATGACTAGTCTGGCTAACATCAAAACAAATGCTATCTATTCATAATCGTAAAGGGCAAACCTGAGCACTAATGTTGATATCCCTAATCCTATTTATTGGCTCAACTAATCTTCTGGGTCTATTGCCACACTCATTCACACCTACCACACAACTGTCAATGAATCTGGGAATGGCCATTCCCTTGTGAGCAGGTACAGTTGCCACTGGATTTCGATATAAGACCAAAGCATCCTTAGCTCACTTTCTACCTCAAGGAACACCTTTCCCTCTAATCCCTATACTTGTTATTATCGAAACAATCAGTCTATTCATCCAACCTATGGCCTTAGCCGTACGATTAACTGCTAATATTACTGCAGGTCACTTGCTCATCCATTTAATTGGAGGGGCTACTCTAGCTCTAACAAGT---ATTAGCACTATTACAGCCCTCATCACCTTTATTATTCTAGTGCTACTTACTATTCTCGAGTTTGCTGTAGCCCTCATTCAGGCCTACGTCTTTACCCTGCTAGTAAGCCTATACTTACACGATAACACT +>Papio_ursinus_isolate_north_NC_020010 +------------TAATGAACGAAAATCTATTCGCCTCATTCTCAGCCCCAA---CAATCCTAGGGCAACCAGCCGCAATCCCCATCATCATACTCCCCACACAACTAATCCCGACTTCTA---AGTACCTCATTAACAACCAACTAACCACCATTCAACAAAACCTCATCAAACTTACCCTAAAACAAATAATAGCACCCCACAACGCTAAAGGACAATCCTGATCTCTAATATTAACATCCTTGATCACCTTTATTACCATAACTAACCTCCTAGGGCTCCTACCCCACTCATTTACGCCAACCACTCAACTTTCTATAAACCTAGCCATAGCAATCCCCCTGTGGACAGGCACGATCATCACTGGTCTCCGCTTTAAAACTAAAAACTCCCTAGCTCACATACTGCCACAAGGTACACCCACACCCCTTATTCCCATACTAGTAATAATCGAAACCATTAGCCTACTTATCCAACCAATAGCCCTAGCCGTACGACTAACTGCTAACATCACAGCCGGCCATCTACTAATACACCTAATCGGAAATACTATGCTAACACTATCAA---CCATCAACCTCCCCGCCACCCTACTCACTTCTGTCCTCCTAACACTACTGACCATCTTAGAAATCGCGGTTGCCCTAATCCAGGCCTACGTCTTCACACTCTTAGTCAACCTGTACCTACGCAACAACA +>Galemys_pyrenaicus_NC_008156 +------------AATGAACGAAAATTTATTCTCCTCTTTCACTACCCCTAC---TTTAATAGGGCTACCCATCGTTATATTAATTATTATATTCCCCAGTATATTCTTCCCATCCCCAAA---CCGACTTATCAATAATCGTCTAATCTCAATTCAACAATGATTAATTAAACTAATTTCTAAACAAATGATGTCTATCCACAACATAAAAGGTCAAACATGAACTCTAATATTAATATCTCTAATCCTATTCATTGGATCAACAAACCTACTAGGACTTCTTCCACACTCCTTCACACCAACAACACAACTATCAATAAATCTAGGAATGGCAATTCCACTGTGGGCAGGAACTGTAATACTAGGCTTTCGACATAAGACAAAAACATCCCTAGCACACTTTTTACCACAAGGTACCCCACTCCCACTTATTCCTATATTAATTATTATCGAAACTATTAGCCTATTTATTCAACCCATGGCACTTGCCGTGCGACTTACTGCAAACATTACAGCAGGCCACCTACTAATCCACCTGATCGGAGGAGCAACTCTTGCTCTAATAAG---TATTAGCACTACAACAGCCATAATTACTTTCATCATTTTAATCCTATTGACCATCCTAGAATTCGCAGTAGCACTAATCCAAGCTTACGTATTTACCCTACTAGTTAGCCTCTACCTACATGACAATAC +>Capricornis_sumatraensis_NC_020629 +------------CTATGAACGAAAATTTATTTGCCTCTTTCGTTACCCCTA---TAGTACTAGGCCTTCCCCTTGTTACCCTTATTGTTTTATTCCCTAGCTTTCTATTCCCCACATCAA---ACCGACTAATTAATAACCGCCTCATCTCCCTCCAACAATGAGCACTTCAACTCATCTCAAAACAAATAATAAATATTCACAACACCAAAGGACAAACATGAACATTAATACTAATATCCCTAATCTTATTTATTGGGTCTACAAATTTATTAGGCCTATTACCCCACTCATTTACACCAACAACACAATTATCAATAAACCTAGGCATGGCTATTCCCCTGTGAGCAGGAGCCGTAATTACAGGCTTTCGCAACAAAACTAAAACATCACTTGCTCATTTTCTACCACAAGGGACACCAACCCCACTAATCCCAATGCTAGTAATCATCGAAACCATTAGCCTTTTCATCCAACCAATAGCCCTTGCCGTACGATTAACAGCCAATATCACAGCTGGACACTTATTAATACACTTAATTGGAGGAGCCACTCTTGCATTAATAA---ACATCAGCACCACAGCAGCATCCATTACATTCATCATCCTAATTCTACTAACAATTCTAGAGTTCGCAGTAGCTATAATTCAAGCCTACGTATTTACCCTTCTAGTTAGCTTATACCTGCATGATAACA +>Orcaella_heinsohni_NC_019591 +------------AATGAACGAAAATCTATTTGCCTCTTTCATAATTCCAAT---TGTACTAGGTTTCCCTATTACTACTCTAATTATTATACTTCCCACTATACTATTCCCAACACCAAA---TCGATTAACTAATAACCGTATAATCACTATCCAACAATGACTTATCAAACTCACATCAAAACAACTGATAGCTACACATAACCCCAAAGGACAAACCTGATCTCTAATACTCATCTCACTTTTCCTTTTCATCTCCTCTACAAACCTCCTTGGAATATTACCTTACTCATTCACACCTACTACTCAACTCTCTATAAACCTAGGCATAGCTATTCCACTATGAGCTGGCACCGTCCTTATCGGCTTCCGCAATAAGACAAAAATATCTCTAGCCCACCTCTTACCATTAGGCACACCCACTTTCCTAATTCCTATGCTGGTAATAATCGAAACTATCAGCCTATTTATTCAACCTTTAGCCCTAGCGGTACGGCTAACAGCGAACATCACAGCAGGTCACCTATTACTACACCTAATTGGAAGTACAACTCTTGCATTAATAAA---CATCAATCTATTCACAGCCCTCATCACATTTATTATCCTTACTCTATTAGCTATCCTTGAATTCGCCGTAGCCCTAATCCAAGCCTACGTGTTCACTCTACTAGTAAGCCTATACTTGCAAGACAATAC +>Leptonychotes_weddellii_NC_008424 +------------ATGAACGAAAATCTATTCGCCTCTTTCACTACCCCTACA---ATAATAGGCCTCCCCATCGTAATCCTAATCATCTTATTCCCAAGCATCCTATTTCCCTCTCCCAAT---CGACTAATTAATAATCGTCTTATCTCAATCCAACAATGATTAATCCAATTAACATCGAAACAAATACTATCCATCCATAACTACAAAGGACAAACATGAGCGCTAATACTTATATCACTCATTCTATTCATTGGATCTACCAACCTACTAGGTCTCTTACCACACTCATTTACTCCTACCACTCAACTATCAATAAACCTGGGAATAGCCATCCCTCTATGAGCAGGAACGGTCATTACAGGCTTTCGACATAAAACAAAAGCATCCCTAGCTCACTTTCTACCTCAAGGAACACCCTTACTCCTTATTCCAATGTTAGTAATTATTGAAACTATCAGTTTATTCATTCAACCCATGGCCCTGGCTGTACGACTAACAGCCAATATCACTGCAGGTCACCTACTAATTCACCTAATCGGAGGAGCTACCCTTGTCCTTATAGAC---ATTAGCACCGCTACAGCTTCAATTACTTTTACCATCCTTATTCTTCTCACCATCCTAGAATTTGCTGTAGCCCTTATTCAAGCCTATGTCTTCACACTACTAGTTAGTTTATATCTACACGACAACACT +>Capra_ibex_NC_020623 +------------TAATGAACGAAAATCTATTTACCTCTTTTATTACCCCTA---TAGTATTAGGCCTCCCCCTTATTACCCTTATTATTTTATTTCCTAGCTTACTATTCCCCTCATCAA---ACCGACTAATTAACAACCGCCTCATCTCTCTCCAACAATGGGCACTCCAACTCGTATCAAAACAAATAATAAGTATTCATAATACCAAAGGACAAACATGAACATTAATATTAATGTCCCTAATCCTATTTATTGGATCTACAAATCTATTAGGCCTTCTACCCCACTCATTCACACCAACTACACAACTATCAATAAACCTAGGCATGGCTATTCCCCTATGAGCAGGGGCCGTAATTACAGGTTTTCGCAATAAAACTAAAACATCATTTGCCCATTTCCTACCACAAGGAACGCCCACACCACTAATCCCAATACTAGTAATTATTGAAACCATTAGCCTCTTTATCCAACCAATAGCCCTTGCCGTACGACTGACAGCCAACATCACAGCAGGACACTTATTAATTCACTTAATCGGAGGAGCCACCCTTGCACTAACAA---GCATCAGTCCCACAACAGCACTCATTACATTTATTATTCTAATTCTACTAACAATTCTCGAATTCGCAGTAGCTATAATCCAAGCCTACGTATTTACTCTCCTAGTTAGCCTATACCTGCATGACAACA +>Mustela_erminea_NC_025516 +------------AATGAACGAAAATCTATTTTCCTCATTCACTACCCCTAC---AATAATAGGATTACCTATCGTCATCATCATTACCATATTTCCAGGTATTCTATTTCCCTCACCTAA---CCGACTGGTTAATAACCGACTTATTTCCATCCAACAATGGTTAGTACAATTAACATCAAAACAGATGTTATCTATTCACAACCAAAAAGGACAAACTTGAGCATTAATACTAATATCACTAATCTTATTTATTGGGTCCACTAACCTGCTAGGTCTCCTACCCCACTCATTTACCCCAACTACACAATTGTCTTTAAACCTAGGAATAGCTATCCCCCTATGAGCAGGTACAGTAATCACTGGCTTCCGATATAAGACAAAAGCCTCTTTAGCCCACTTTTTACCACAAGGAACCCCACTACCCCTGATTCCCATACTCATCATCATCGAAACTATCAGCTTATTCATTCAACCTATAGCCCTAGCCGTGCGATTAACAGCCAACATCACCGCAGGCCACTTATTAATTCACCTAATTGGAGGAGCCACCTTAGCCCTAATAAG---CATCAGCACTATTACAGCGACAATTACATTCACTATCCTTGTCCTACTAACCATCCTAGAATTTGCAGTAGCCCTCATTCAAGCCTACGTCTTTACTTTACTAGTAAGTCTATATTTACATGACAATAC +>Okapia_johnstoni_isolate_CYTO_NC_020730 +------------ATGAACGAAAATCTATTTGCCTCTTTTATTACCCCAACA---TTCCTAGGCCTCCCTCTTGTCACCCTCATCATCATATTCCCTAGCCTATTATTCCCAACATCAAGC---CGACTAGTAAGCAATCGTTTGATTTCCCTCCAACAATGAGCACTCCAACTCATATCAAAACAAATAATAGGCATTCACAACACCAAAGGGCAAACATGGACCCTAATATTAATATCCCTAATTCTATTTATCGGCACAACAAATCTACTAGGCCTGCTACCCCACTCATTTACACCAACCACACAATTGTCAATAAATCTAGGCATAGCCATCCCCCTATGAGCAGGAGCTGTAGCCACAGGATTTCGCAATAAAACCAAAGCATCACTCGCCCACCTCCTACCACAAGGAACACCAACCCCTTTAATCCCAATACTAGTAATCATTGAGACCATCAGTCTCTTTATTCAACCAGTGGCCTTAGCCGTTCGGCTAACAGCTAATATTACCGCCGGACATTTGCTAATTCACCTGATTGGAGGAGCCACACTCGCACTAATAAAC---ATTAGTGCCATAACAGCCCTCATCACATTTATTGTTTTAGTCCTACTAACAATTCTCGAATTCGCAGTAGCCATAATTCAGGCCTACGTGTTCACCCTCCTGGTTAGCTTATACTTGCACGACAACACA +>Mustela_frenata_voucher_ROM101452_NC_020640 +------------TAATGAACGAAAATCTATTTTCCTCATTCATTACCCCTA---CAATAATAGGACTTCCTATTGTAATTATTATTACAATGTTCCCAAGCATTATATTCCCATCACCTA---GCCGACTAATCAACAATCGACTCATCTCCCTTCAACAATGACTAGTACAATTAACATCAAAACAGATATTATCTATCCACAACCAAAAGGGACAAACCTGGGCCCTAATATTAATATCATTAATTCTATTTATTGGCTCTACTAACTTATTAGGCCTACTACCCTACTCATTTACTCCTACCACACAACTATCCCTAAACCTAGGTATAGCCATCCCCTTATGAGCAGGTACTGTAATCACTGGTTTCCGGTATAAAACAAAAGCCTCTTTAGCCCACTTCTTACCACAAGGAACACCACTGCCCCTAATTCCTATACTTATTATCATCGAGACTATTAGCCTATTCATTCAACCCATGGCTCTGGCCGTACGACTAACAGCCAATATTACCGCAGGCCATTTATTAATTCACCTGATCGGAGGGGCCACCCTAGCCTTAATAA---ACATCAGCACTATTACAGCAATAATTACCTTTACTATCCTTGTCCTCCTAACTACCCTAGAATTCGCAGTAGCCCTTATCCAGGCCTACGTGTTCACTTTATTAGTAAGCCTGTACTTACACGACAATA +>Loxodonta_cyclotis_isolate_Coco_NC_020759 +------------AGTGAACGAAGAACTATCCGCCTTCTTCGATGTACCCGT---------------AGGTACAATAATACTAGCTATTGCATTTCCAGCAATCCTACTTCCAACCCCAAA---CCGCCTAATCACCAACCGTTGAATTACAATCCAACAATGATTGATCCAATTAATCATAAAACAACTTCTGTCTATTCATAATACAAAAGGACTGTCATGATCTCTAATATTAATTACTCTAACTTTATTCATTGGTCTAACCAATCTACTAGGTCTATTACCCTATTCATTCGCTCCTACAACACAACTAACCGTAAACTTAAGCATAGCAATCCCCCTATGGACTGGTACAGTTGTCCTGGGCTTTCGATATAAAACCAAAATATCACTAGCTCATCTTCTCCCACAAGGAACACCTACATTCCTTATCCCTATAATTATTATCATCGAAACTATTAGTCTCCTCATTCGACCAGTCACCCTAGCGGTTCGACTCACCGCCAATATCACGGCAGGTCACTTACTTATTCATTTAACCGGAACCGCCACACTAACTTTACTATC---CATTCATTCAACAACAATTACAGTAACATTTGTTACAGTAATTCTACTTACGATCTTGGAACTTGCCGTAGCACTAATTCAAGCCTACGTCTTTGCTCTACTAATTAGCCTCTACCTACACGAGAGTGC +>Gorilla_gorilla_NC_001645 +------------ATGAACGAAAATTTATTCGCTTCATTCATTGCCCCCACA---ATCCTAGGCTTACCCGCCGCAGTATTAATTATCCTACTTCCCCCTCTACTGATCCCCACCTCCAAA---TATCTCATCAACAACCGACTGATTGCCACCCAACAGTGACTAATCCAACTAACCTCAAAACAAATAATAACTATACATAACGCCAAGGGACGAACCTGATCCCTTATGTTAATATGATTAATTATTTTTATTGCCACAACCAACCTCCTCGGACTCTTGCCCCACTCATTCACACCAACTACCCAGCTATCTATAAACCTGGCCATAGCCATCCCCCTGTGAGCAGGCGCAGTAACTACAGGCTTTCGCTCCAAGACTAAAAATGCCCTAGCCCACCTACTACCACAAGGCACCCCTACACCCCTTATCCCTATACTAGTCATCATTGAAACCATCAGCCTATTCATCCAACCAATAGCCCTAGCTGTACGCCTAACCGCTAACATCACTGCAGGTCACCTACTTATGCACCTAATCGGAAGCGCCACACTAGCAATATCAACT---ACCAATCTTCCCTCAACACTCATTATCTTTACAGTCCTAATTTTATTAACTATACTAGAAATCGCTGTCGCCCTCATCCAAGCCTACGTTTTCACACTTTTAGTGAGCCTCTACCTGCACGAGAACACA +>Heterocephalus_glaber_NC_015112 +------------TAATGAACGAAAATCTATTTGCCCCCTTCTCCACACCAA---CACTAATGGGCCTCCCCATCATCATCATTATCATAATATTCCCATCCATACTACTATCACGACCCA---ACCGCCTAATCAACAACCGACTCACCTCCCTCCAACAATGAGCAATCCAAATAACACTAAAACAACTAATAACAATACACAACACAAAAGGCCGCTCATGAACATTAATACTCACATCCCTAATCCTATTTATCTCATCTACCAACCTTCTAGGACTACTGCCATACACCTTTACCCCCACAACACAACTATCAATGAACCTAGGAATAGCCATTCCACTATGAGCCGGAACCGTCATCCTAGGCTTCCGACATAAAACCAAAAAATCATTAGCCCATTTACTCCCGCAAGGCACCCCAAACCCACTCATCCCTATACTAGTATTAATCGAAACAATTAGCTTATTCATTCAGCCCGTAGCCCTGGCTATTCGACTCACAGCCAACATCACCGCAGGACATCTATTAATACACCTAATCAGTAAAGCTGTCCTCACCCTAATTT---CCATCAACATCACCACAGCCCTGATTACATTTACCATCTTAATCTTACTCACAATACTAGAATTTGCCGTAGCCATAATCCAAGCTTATGTATTTACTCTACTCGTCAGCCTTTACCTGAACGACAACA +>Viverricula_indica_NC_025296 +------------AATGAACGAAAATTTATTCGCCTCCTTCATTACCCCAAC---AATAATAGGACTCCCTATTGTTATCTTAATTGTTATATTCCCAAGCATCCTATTCCCTTCACCTAA---CCGACTTATTAACAACCGCCTAATCTCCCTACAACAATGATTAATTCAACTTACAGCAAAACAAATATTAAGCATTCACAACCAGAAAGGTCAAACCTGAGCCTTAATATTAATTTCTTTAATCCTATTTATTGGCTCAACTAACTTATTAGGTTTACTACCACATTCATTTACTCCTACTACCCAACTATCAATAAATTTAGGGATAGCAATCCCCCTATGAGCTGCCACCGTAGTCATCGGGTTTCGACACAAGACAAAATCATCTCTAGCTCACTTTCTACCCCAGGGAACCCCTCTACCTTTAATCCCTATATTAGTAATCATCGAAACTATTAGTTTATTCATCCAACCGATAGCCTTAGCCGTACGACTTACAGCTAACATTACTGCAGGCCACCTATTAATTCACCTAATCGGAGGGGCTGCTCTAGCATTAATAAA---TATTAGTACTTCCGTTGCCCTCATTACTTTTATTATCCTTATTTTATTAACAATCCTTGAATTCGCTGTAGCCCTCATTCAAGCCTACGTTTTCACTCTACTAGTAAGTCTATACCTACATGACAATAC +>Macaca_fascicularis_NC_012670 +------------ATGAACGAAAACTTGTTTACCCCTTTCTCAACCCCAACA---ATCCTAAACCAACCCGCCACAATCCCAATTATCCTGTTCCCCGCCACGCTGGTCTTAACCTCTAAA---CACCCCATTAATAACCGACTAGCTACCATTCAACAAAACCTGATTCAACTCACCCTAAAACAAATAATAATAACTCACAACGCTAAGGGACAAACCTGATCTTTAATACTAACATCCCTAATCACCTTTATCGCTATAACAAACCTCTTAGGACTTCTGCCCTACTCATTCACACCAACCACCCAACTTTCCATAAACCTAGCCATAGCAATCCCCCTATGAGCAGGCACAGTAATAGTAGGACTTCGCTTTAAAACCAAAAACTCCCTAGCCCACCTCCTACCACAAGGCACACCCACACCTCTCATCCCCATGTTGGTAGTAATCGAAACTATCAGCCTACTTATTCAACCGGTAGCCCTAGCCGTACGACTAACCGCAAACATCACAGCCGGCCATCTGCTAATACACCTAATTGGAAACGCCGCACTAGCACTATCAACC---GCTAACTTCTCCCTAACTCTACTAACTTCCACACTCCTGACACTACTAACTATTCTAGAAATTGCAGTAGCCCTAATCCAAGCCTATGTCTTCACACTCTTAGTCAGCCTCTATCTGCATAACAATACC +>Ateles_belzebuth_NC_019800 +------------TAATGAACCAAAATCTATTTGCCTCCTTCAATGTGCCAA---TAATCTTAGGAATCCCCCTGATTACATTAATTATTATATTTCCCACTATATTAATTACACCCCCTA---ATAAACTACTCAGCAATCGACTCTCCTCCCTTCAACAATTACTAATTCAACTCCTACTAAAACAAATAATAATAGTACATAGCATTAAAGGACGGACCTGATCCCTCCTACTTCTAGCCCTAATTACCTTCATCACCCTAACCAATATTCTCGGACTTACACCCTATGCATTCACACCAACTACCCAGCTATCAATAAATATAGGCATAGCAATTCCCCTATGAATAGCCACCGTACTAATAGGACTTCGATTTAAAACAAAAGAATCTCTAGCTCACTTCCTACCTCAAGGAACACCCGCTCCACTTATCCCCATACTAATTATCATTGAAACAATCAGCCTTTTCATCCAACCGATCGCACTAGCCGTACGGTTAACAGCTAATATCACAGCAGGCCATCTATTAATACACCTACTAGGAGACACCGCATTAACCCTCTCGT---CTATCTATTTATCTTCCTCCGTAATCACAGTTATTGTTATCATTTTACTAGTCACTCTAGAATTAGGTGTAGCCCTAATTCAAGCCTACGTCTTCACACTTCTAGTAAGCCTATATTTACACAATAACT +>Gazella_cuvieri_isolate_CYTO_NC_020704 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTAT---AATTCTAGGCCTTCCCCTCGTTACCCTCATTGTCCTATTCCCTAGCCTATTATTTCCAACATCAAA---CCGACTAATAAATAACCGTCTTATCTCTCTTCAACAATGAGTACTTCAACTTGTATCAAAACAAATAATAAGCATCCACAACCCCAAAGGGCAAACATGAGCACTTATACTGATATCCTTAATTATATTTATTGGGTCAACAAACTTACTAGGCCTACTACCCCACTCTTTTACACCAACCACACAACTATCAATAAACCTAGGTATAGCCATTCCCCTATGAGCAGGAGCTGTAATCACGGGCTTCCGCAACAAAACTAAAGCATCACTTGCCCACTTTTTACCACAAGGAACACCCACCCCTCTAATCCCTATACTAGTAATTATCGAAACTATTAGCCTATTTATTCAACCAGTAGCCCTCGCAGTACGACTAACAGCCAATATTACAGCAGGACACCTATTAATTCACCTAATTGGGGGGGCTACATTAGCACTAATAAA---TATTAGTACTACAACGGCTCTTATTACATTTATTATTCTAGTTTTACTAACAATTCTTGAATTCGCAGTAGCTATAATTCAAGCCTACGTATTTACTCTTTTAGTCAGCCTATACCTACACGATAACAC +>Pteropus_dasymallus_NC_002612 +------------ATGAACGAAAATTTATTCTCCTCTTTCATTACCCCTACA---ATAATGGGCCTTCCCATTGTCACACTAATTATTATGTTCCCAAGCATGTTATTCCCATCAACTAAC---CGACTAATCAACAACCGCTTAATCGCAATTCAACAATGAATTATCCACTTGACCTCAAAACAAATAATAGCAATCCACAACCAGACAGGACAAAAATGGTCACTAATACTTATATCACTTATCCTATTTATCGGATCAACAAACCTGCTAGGCTTGCTGCCACATTCCTTCACACCAACAACTCAACTATCAATAAACCTAGGAATGGCAATTCCCCTGTGAGCGGGAACAGTGGCTCTAGGATTTCGCCACAAAACAAAAGCATCCCTGGCCCACTTCCTTCCCCAAGGAACTCCAATCCCCCTAATCCCCATGCTTATCATTATCGAAACTATCAGCCTATTTATTCAACCAATAGCCCTGGCAGTACGATTAACCGCAAACATTACAGCCGGACATCTACTAATTCACCTCATCGGAGGAGCAACTCTGGCCCTAATAAGC---ATTAGCACAATAACGGCTCTCATCACGTTTGCCATCTTAATCCTATTAACAATTCTTGAATTCGCAGTAGCCCTAATTCAAGCCTACGTATTTACACTGCTAGTAAGCCTGTATTTACACGATAACACC +>Capricornis_crispus_NC_012096 +------------TAATGAACGAAAATTTATTTACCTCTTTCATTACCCCTA---TAGTACTAGGCCTTCCCCTTGTCACCCTTATCGTCCTATTCCCTAGCTTACTATTCCCCACATCAA---ACCGATTAATTAATAACCGCCTCATCTCCCTCCAACAATGAGCACTTCAACTCATCTCAAAACAAATAATAATTATTCACAACGTCAAAGGACAAGCATGAACATTAATACTAATATCCCTGATTTTATTTATTGGGTCTACAAATTTATTAGGCCTATTACCCCACTCATTCACACCAACAACACAACTATCAATAAACCTAGGCATGGCTATTCCCCTGTGAGCAGGAGCCGTAATCACAGGCTTCCGCAACAAAACCAAAACATCACTCGCTCATTTCCTACCACAAGGAACACCAACCCCACTAATCCCAATGCTAGTAATCATCGAAACCATTAGTCTCTTCATCCAACCAATAGCCCTTGCCGTACGACTAACAGCCAATATCACAGCTGGACACTTATTAATTCACTTAATTGGAGGAGCCACCCTTGCACTAATAA---ATATCAGCACCATAGCAGCATCTATTACATTCATTATCCTAATTCTACTAACAATCCTAGAGTTCGCAGTAGCTATAATTCAAGCCTACGTATTTACTCTTCTAGTTAGCCTATACCTGCATGATAATA +>Choloepus_didactylus_NC_006924 +------------AATGAACGAAAACTTATTCGCCTCTTTCGTAGTCCCAAC---GATAATGGGACTACCCATTGTAATTCTTATCGTGATATTCCCCACCCTACTATTCCCATCACCTGG---CCGTCTAATTACAAACCGACTCATCTCAATTCAACAACAAATAACCAACCTAATCCTAAAACAAATAATAATCATTCACAGCCCCAAAGGACGCACCTGGTCCCTAATACTAATTTCACTCATCACATTCATTGGATCGACAAACCTCCTGGGACTGCTCCCCTACTCATTCACCCCAACCACCCAACTTTCTATAAACCTAGGAATGGCCGTTCCACTATGAGCCGGAACAGTAATTATAGGCTTACGCCACAAGACCAAAACATCACTAGCCCATTTCCTACCACAAGGCACTCCAATTCCCCTGATTCCCATACTAGTGATTATCGAGACAATAAGCTTATTTATCCAACCCACAGCTCTAGCCGTACGACTTACAGCAAATATCACCGCGGGACATCTCATCATACACCTCATTGGTAACGCCACACTAGCACTAATATC---CATCAGCCCTACAACAGCCTTTATCACCTTCATCATTCTGATCGCGCTAACAGCCCTTGAATTTGCAGTAGCACTAATTCAAGCGTACGTGTTCACTCTCCTAGTCAGCCTTTACCTACACGACAACAC +>Propithecus_edwardsi_isolate_PPP_NC_026089 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAACA---ATTGTAGGAATCCCTATTGTGATCCTAATCATCGCAATCCCTAGCATTCTCTTCCCTTCACCCACC---CGTCTCATTTCCAACCGATTGACTTCCTTACAACAATGACTTATTCAACTAGTACTAAAACAACTAATAATGATACACAGCATTAAAGGACGAACTTGGTCCCTTATATTAATTTCACTAATCCTATTTATTGGATCAACCAACTTACTAGGTTTATTACCCCACTCATTCACCCCTACTACTCAACTATCAATGAATCTAGGCATAGCCATCCCACTATGAGCTGCTGCAGTCATTACAGGCTTTCGTCATAAAACAAAAATATCCTTAGCTCACCTACTACCACAAGGAACGCCAGTCCCTCTTATCCCCATACTAGTAATCATCGAAACCATTAGCCTTTTCATTCAACCTATAGCATTAGCCGTACGATTGACAGCTAACATTACAGCAGGTCACCTACTCATACACTTAATTGGTGGAGCCACCTTAGTATTAACCTCA---ATTAGTCCCACCACTGCCTCAATTACATTTACTATTCTTATTCTCCTTACAATCCTTGAATTCGCCGTCGCCCTAATCCAAGCCTATGTATTTACTTTACTAGTTAGCCTTTATTTACATGACAACACC +>Propithecus_edwardsi_isolate_TRA173_NC_026097 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAA---CAATTGTAGGAATCCCTATTGTGATCCTAATCATCGCAATCCCTAGCATTCTCTTCCCTTCACCCA---CCCGTCTCATTTCCAACCGATTGACTTCCTTACAACAATGACTTATTCAACTAGTACTAAAACAACTAATAATGATACACAGCATTAAAGGACGAACTTGGTCCCTTATATTAATTTCACTAATCCTATTTATTGGATCAACCAACTTACTAGGTTTATTACCCCACTCATTCACCCCTACTACTCAACTATCAATGAATCTAGGCATAGCCATCCCACTATGAGCTGCTGCAGTCATTACAGGCTTTCGTCATAAAACAAAAATATCCTTAGCTCACCTACTACCACAAGGAACGCCAGTCCCTCTTATCCCCATACTAGTAATCATCGAAACCATTAGCCTTTTCATTCAACCTATAGCATTAGCCGTACGATTGACAGCTAACATTACAGCAGGTCACCTACTCATACACTTAATTGGTGGAGCCACCTTAGTATTAACCT---CAATTAGTCCCACCACTGCCTCAATTACATTTACTATTCTTATTCTCCTTACAATCCTTGAATTCGCCGTCGCCCTAATCCAAGCCTATGTATTTACTTTACTAGTTAGCCTTTATTTACATGACAACA +>Nannospalax_ehrenbergi_NC_005315 +------------AATGAACGAAAATCTATTTGCCTCTTTCGCTACCCCTAC---ACTAATAGGCCTCCCCATTGTAATCCCAATCATTATACTCCCAACCCTATTTTTTAAAACAACAAA---CAAATTAATCAACAACCGAGTGACAACAGCCCAACAATGATTAATTAAGCTAATTACCAAACAAATAATATTTACGCACTCACCAAAAGGCCGCACATGATCCCTAATACTCACCTCACTCATCATCTTCATCGGATCCACAAACCTCCTAGGACTGCTTCCCCATACATTCACCCCAACCACACAACTCTCAATAAACTTAGGCATAGCAATCCCAATATGGGCCGGAGCTGTAATCCTAGGCTTCCGTCATAAAACAAAAGCATCACTAGCCCACTTCCTACCCCAAGGTACCCCCATTATCCTGATCCCAATATTAGTTATCATTGAAACAATTAGCCTATTCATTCAACCTATGGCACTAGCCGTACGTCTAACAGCTAACATCACAGCAGGACACCTGCTAATTCATCTAATTGGAGGCGCTACGCTAGTATTAACCAC---AATTAGCCCATCAACAGCCAGCATTACCTTCCTAATTCTTACAATACTTACTATCCTAGAACTCGCTGTAGCTATAATCCAAGCCTACGTATTTACCTTACTAGTTAGCCTATACCTACAAGACAACAC +>Rupicapra_pyrenaica_NC_020789 +------------ATGAACGAAAATCTGTTTACCCCTTTCATTACCCCTATA---ATACTAGGCCTCCCCCTTGTTACTCTTATCATTCTATTTCCTAGCTTACTATTTCCTACATCAAAT---CGACTAATCAATAACCGCCTCATCTCCCTCCAACAGTGAATTCTCCAGCTTGTATCAAAACAAATAATAAGTATTCACAACACCAAAGGACAAACATGAACATTAATACTAATATCCCTAATCCTATTCATTGGGTCTACAAATCTACTAGGCCTACTACCCCACTCATTTACACCAACCACACAGCTATCAATAAACTTAGGCATGGCCATTCCCCTATGAGCAGGAGCCGTAATCACAGGCTTTCGCAACAAAACTAAAGCATCACTTGCCCATTTCCTACCACAAGGGACACCCACCCTACTGATCCCAATACTAGTAATTATTGAGACCATCAGCCTTTTTATTCAACCAATAGCCCTCGCCGTACGATTAACAGCCAATATCACGGCAGGGCACTTACTAATTCACTTAATTGGAGGAGCCACCCTTGCATTAATGAAT---ATCAGTACCACAGCAGCACTTATCACATTCATCATTTTAGTTCTACTAACGATTCTAGAGTTCGCAGTAGCCATGATTCAAGCCTACGTGTTTACTCTCTTAGTTAGCTTATACCTGCATGACAACACA +>Apodemus_peninsulae_NC_016060 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATCACCCCTT---CAGTAATAGGACTACCAATCGTAATCACCATTATCATGTTTCCATCTATTCTATTTCCATCATCAG---AACGTTTAATTAACAACCGCCTTCACTCATTCCAACATTGACTAATTAAACTTATTATTAAACAAATAATATTAATTCATACACCAAAAGGACGTACCTGAACCTTAATAATTGTTTCCTTAATTATATTTATTGGCTCAACAAACCTACTAGGTCTTCTCCCTCATACATTCACACCTACTACTCAACTATCAATAAACCTTAGTATAGCAATTCCACTATGAGCAGGAGCCGTACTACTAGGATTTCGTCATAAACTAAAAAGCTCTCTAGCCCACTTTCTTCCACAAGGAACACCAATCTCACTAATCCCAATACTCATTATTATTGAAACAATTAGCCTATTTATCCAACCTATAGCCCTTGCAGTACGATTAACAGCCAACATCACCGCAGGACACTTACTTATGCATCTTATTGGAGGAGCAACTTTAGTCCTTATAA---ACATTAGCCCACCAACTGCTACTATTACATTTATTATTCTTCTCCTTCTTACAGTACTAGAATTTGCTGTAGCCTTAATTCAAGCATATGTATTTACTTTACTAGTAAGCCTTTATTTACATGATAACA +>Bos_indicus_NC_005971 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTACCCCTGT---AATTTTAGGTCTCCCTCTCGTAACCCTTATCGTACTATTCCCCAGCCTACTATTCCCAACATCAAA---CCGACTAGTAAGCAATCGCTTTGTAACCCTCCAACAATGAATACTTCAACTTGTATCAAAACAAATAATGAGCATCCACAATTCTAAAGGACAAACATGAGCATTAATACTAATATCTCTAATCCTATTTATTGGATCAACAAACCTACTAGGCCTATTACCCCATTCATTCACACCGACAACACAACTATCAATAAACCTAGGCATAGCCATCCCCCTGTGAGCAGGAGCCGTAATTACAGGATTCCGCAATAAAACTAAAGCATCACTTGCCCATTTCTTACCACAAGGAACACCCACTCCACTAATCCCAATACTAGTAATTATTGAAACTATCAGCCTTTTTATTCAACCTGTAGCCCTCGCCGTGCGGTTAACAGCTAACATCACTGCAGGACACCTATTAATTCACCTAATCGGAGGAGCTACACTTGCACTAATAAG---CATTAGCACTACAACAGCTCTAATTACATTCACCATTCTAATCCTACTAACAATTCTAGAGTTTGCAGTAGCTATAATCCAAGCCTATGTATTCACTCTCCTAGTCAGCCTATATCTGCATGACAACAC +>Erythrocebus_patas_NC_021947 +------------ATGAACGAAAATTTACTTACCTCATTCACGACCCCAATA---ATTCTAAATCAACCTGCCACTATCCCCATTATCCTATTCCCTGTATTACTAATTCCAACCTCCAAG---CATATCGTTAACAACCGACTAGTCACTATTCAACATAACTTAGTCCAACTTACCCTGAAGCAAATAATAATTACCCATAATACTAAAGGACAAGCCTGATCTCTAATACTAATATCTCTAATTACCTTTATCACCATGACTAATCTCCTAGGGCTCCTACCTCACTCATTTACACCCACTACTCAACTATCTATAAACCTAGCCATGGCAATCCCCCTATGAGCAGGCACAGTAATCACAGGCCTTCGCTTTAAAACTAAAGATTCTCTAGCCCACTTCCTACCACAAGGCACACCAACACCACTTATCCCTATACTGGTGATGATCGAAACCACTAGCCTACTCATTCAACCAGTAGCTCTAGCTGTACGCTTAACTGCTAACATTACAGCTGGTCACCTATTAATATACCTGACTGGAAGCGCTGTATTAGCACTACTAACC---ACCAGCCCCTTCATTGCCCTACTAACCTCTACACTCCTAATACTACTAACTATCCTAGAAATCGCAGTCGCTCTAATCCAAGCCTACGTCTTTACACTCCTAATTAACCTCTATCTGCACAACAATACC +>Potorous_tridactylus_NC_006524 +------------TAATGAACGAAAATCTATTTGCCCCTTTCATCTCCCCTA---CCATCCTAGGTATTACAACACTGCCAATTATTATACTCTTCCCATGCTTATTGCTTAGTACACCAA---AACGTTGACTCCCTAATCGTATCCAATTACTCCAAATTTGATTGATCCGACTGATTACTAAGCAAATAATAATAATGCACAACAAACAAGGACGATCCTGAGCTCTTATATTAATATCTCTTATTCTATTCATTGCCTCTACAAATCTACTAGGACTACTACCATATTCCTTTACTCCTACAACACAACTATCCATAAATATTGGCATAGCCATCCCACTATGATTAGCAACCGTCTTAATAGGTTTCCGAAATAAACCTAAAATTTCACTAGCCCATTTCTTACCCCAAGGTACACCAACACCGTTAATTCCAATACTCATCATCATCGAAACTATTAGCCTATTTATCCAACCTTTAGCGCTAGCTGTACGATTAACAGCCAACATCACTGCCGGCCACCTGCTTATTCACCTCATTGGCTCCGCAACACTAGCCCTATCGT---CTATCAGCATAACAGTGTCAACCATCACATTTACAATCCTATTCTTACTCACAATCCTAGAGTTAACCGTAGCCATAATTCAAGCTTATGTATTCACCCTCCTAGTAAGCCTTTACCTACACGACAACT +>Trachypithecus_germaini_NC_019580 +------------AATGAACGAAAATTTATTTACCCCATTTACAACCCCAAC---ACTCCTAAGTCTACCCGCTGTAGTTCCCATTATTTTATTTCCCACATTATTATTCCCAACCTCCAA---ACACCTTGTTAACAACCGACTAGTTACTATTCAACAAAATCTGACTCAACTTATCCTAAAACAAATAATAATGATTCATAATACAAAAGGGCGAGCTTGATCCCTAATACTAATGTCTCTAATCATTTTCATTGCTACAACCAACCTCCTCGGGCTATTACCTCACTCATTTACACCTACCGCCCAGCTGTCTATGAATTTGGCAATGGCAATCCCTCTATGGGCTGGTACAGTAATTACAGGCCTTCGCTTCAAAACCAAAAGTTCCCTAGCCCATTTTTTACCACAAGGCACACCTACACTTCTTATCCCTATGCTAGTAATTATTGAAACTATCAGCTTATTTATTCAACCAGTAGCCCTAGCTGTACGCCTAACCGCTAATATTACAGCAGGCCATCTACTCATGCATCTAATCGGAAGTGCCGTACTAGCGCTATTAAC---CATTAATTTTTTTGCAACTTCGCTAACCTTTATACTCCTGTTACTCCTAACAATTCTAGAGATTGCGGTTGCCCTAATTCAAGCCTATGTCTTCACGCTCCTGGTAAGCCTTTACTTACATGATAACAC +>Lepilemur_ruficaudatus_NC_021953 +------------ATGAACCAAAATTTATTCTCCTCTTTTATTACCCCAACA---ATTGTAGGGATCCCTGTCGTTATTCTCATCATCTTAACCCCCAGTATTTTCTTCCCCTCCCCCTCC---CGACTTATTGATAACCGCCTCACCTCCCTACAACAATGACTGGTCCAACTAATGCTAAAACAACTAATAGCTACACACAATACTAAAGGACGAACCTGAGCTCTCATGTTAATTTCACTAATTCTATTTATTAGCTCAACTAACCTACTAGGCTTATTACCCCACTCGTTTACCCCCACCACACAACTATCAATAAACCTAGCTATAGCAATCCCCCTATGGGCGGCTACAATTATTACGGGCTTCCGTTACAAAATAAAAGCATCCCTAGCCCACCTCCTACCACAAGGAACGCCCACCCCACTTATTCCTATATTAATTATCATTGAAACTATTAGCCTTCTCATCCAACCCATAGCACTAGCCGTGCGACTAACAGCCAACATTACGGCGGGTCACCTACTCATACACCTAATTGGAGGTACCACCCTAGTATTAACCTCA---ATCAACCCTAACATCTCCCTAATCACATTTATTATTCTTGTTTTGCTTACAGTCCTTGAGTTAGCCGTCGCCTTAATTCAGGCCTATGTATTCACCCTATTAGTAAGCCTTTACCTACATGATAACACC +>Naemorhedus_goral_NC_021381 +------------TAATGAACGAAAATTTATTTACCTCTTTCATTACCCCAA---TAATACTAGGCCTTCCCCTCGTTACCCTTATTGTCCTATTTCCTAGCTTACTATTCCCCACATCAA---ACCGATTGATTAATAACCGCCTCATCTCCCTCCAACAATGGGTACTTCAACTCGTGTCAAAACAAATAATAAGCATTCACAACATCAAAGGACAAACATGAACATTAATACTAATATCCTTAATTTTATTTATTGGATCCACAAATTTATTAGGTTTATTACCCCACTCATTTACACCAACAACACAACTATCAATAAACTTAGGCATGGCTATTCCCCTATGAGCAGGAACCGTAATCACAGGCTTTCGCAACAAAACTAAAGCATCACTTGCTCATCTTCTACCACAAGGAACACCAACCCCACTAATCCCAATGCTAGTAATTATCGAAACTATTAGCCTCCTAATCCAACCAATAGCCCTTGCTGTACGACTAACGGCTAATATCACGGCAGGACATTTATTAATTCACTTAATTGGAGGAGCTACTCTCGCATTAATAA---GTATCAGTACCACAACAGCACTAATCACATTTATTATTCTAGTTCTACTAACAATTCTAGAATTCGCGGTAGCTATAATTCAAGCCTACGTATTTACCCTCCTAGTTAGCTTATACCTGCATGATAACA +>Balaenoptera_physalus_NC_001321 +------------AATGAACGAAAATTTATTTGCCCCTTTTATAATCCCAGT---TATGCTAGGTATCCCTATTACCACTCTAATCATTATCCTCCCATCTATATTATTCCCTGCACCAAA---TCGACTAATCAACAACCGCACGATCGCCATCCAACAATGATTAACCAAACTCACATCAAAACAACTAATAAACGTACACAGTCCTAAAGGACAAACTTGATCTCTAATGCTCATCTCACTATTCCTATTTATTGCCTCTACCAATCTCCTTGGAATATTACCTCACTCATTTACACCCACCACACAACTCTCAATAAACGTAGGAATGGCTATCCCCTTATGAGCTGGCACCGTTACCACAGGCTTCCGCAACAAAACAAAAATATCCTTAGCACATCTACTACCACAGGGCACACCCACTTTTCTTATTCCCATATTAGTAATTATTGAGACTATCAGTCTATTCATTCAACCGGTAGCATGAGCTGTACGGCTAACTGCCAACATCACAGCAGGCCACTTATTAATGCATCTAATTGGAGAAACAACCCTCGCACTAATAAA---TATTAATCTATTTTCAGCCTTTATCACTTTCACAATCCTTGCTCTATTAACTATCCTTGAATTTGCTGTCGCCCTAATTCAAGCTTACGTATTTACCCTTCTAGTAAGCCTATACCTTCATGACAACAC +>Sorex_unguiculatus_NC_005435 +------------ATGAACGAAAATTTATTCGCCTCTTTCGCTACCCCAACAATAATAATAGGCCTCCCTATTGTTGTTCTAATCATTTTATTTCCTAGCATTTTATTTCCAACCCCTAAT---CGACTAATTAACAACCGATTAGTATCTCTTCAACAATGACTAATTCAACTGACCTCAAAACAAATAATAGCAATTCACAACCAAAAAGGACAAACATGAACTCTCATGTTAATCTCACTAATCCTATTCATTGGCTCTACTAACCTACTTGGTCTTCTACCACACTCATTCACACCCACAACTCAACTTTCAATAAATCTAGGAATGGCTATCCCCTTATGAGCCGGAACAGTAATTACAGGATTCCGGTACAAAACTAAAGCATCTCTAGCCCATTTCCTGCCCCAAGGTACCCCTCTACCACTAATCCCAATACTTATTATCATCGAAACTATCAGTCTTTTTATCCAACCAATAGCATTAGCCGTACGACTAACTGCAAATATTACAGCAGGCCACCTACTAATTCACCTAATCGGAGGCGCAACTCTAGTTCTAATAAGC---ATTAGCCCAATTACAGCATTCATCACTTTTATCATCTTAGTGATACTAACAGTACTTGAATTTGCTGTAGCACTAATTCAAGCTTACGTCTTTACCCTTCTAGTAAGCCTTTACTTGCACGATAACACC +>Giraffa_camelopardalis_angolensis_NC_012100 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATCACCCCTA---CATTTTTAGGTCTTCCTCTTGTCATCCTTATCGTTATATTTCCCAACCTGCTATACCCAACATCTA---ATCGACTAACAAACAACCGCCTCATCTCCCTGCAACAATGAACACTCCAACTCATATCAAAACAAATAATAAACATCCATAACACCAAAGGACAGACATGGACCCTAATACTAATATCTCTAATTCTATTTATTGGAACAACCAATCTACTGGGCCTGTTTCCCCACTCATTTACACCAACTACACAACTATCGATAAACTTAGGCATAGCCATTCCTCTATGAGCAGGAGCTGTAGCCACAGGCTTCCGCAACAAAACCAAAGCATCACTCGCTCACTTTTTACCACAAGGAACACCAACCTTACTAATCCCAATATTAGTCATCATTGAAACTATCAGTCTATTTATTCAACCAATAGCTCTAGCCGTACGACTAACAGCCAATATCACTGCCGGACACTTATTAATTCACTTAATTGGAGGAGCCACACTCGCACTAATAA---ACATTAGTGCTATAACAGCTCTCATCACATTTGCTGTCTTAATTTTACTGACAATCCTTGAATTTGCAGTAGCTATAATTCAAGCCTACGTATTCACCCTCTTAGTTAGCCTGTATTTGCACGACAACA +>Mus_musculus_NC_005089 +------------AATGAACGAAAATCTATTTGCCTCATTCATTACCCCAAC---AATAATAGGATTCCCAATCGTTGTAGCCATCATTATATTTCCTTCAATCCTATTCCCATCCTCAAA---ACGCCTAATCAACAACCGTCTCCATTCTTTCCAACACTGACTAGTTAAACTTATTATCAAACAAATAATGCTAATCCACACACCAAAAGGACGAACATGAACCCTAATAATTGTTTCCCTAATCATATTTATTGGATCAACAAATCTCCTAGGCCTTTTACCACATACATTTACACCTACTACCCAACTATCCATAAATCTAAGTATAGCCATTCCACTATGAGCTGGAGCCGTAATTACAGGCTTCCGACACAAACTAAAAAGCTCACTTGCCCACTTCCTTCCACAAGGAACTCCAATTTCACTAATTCCAATACTTATTATTATTGAAACAATTAGCCTATTTATTCAACCAATGGCATTAGCAGTCCGGCTTACAGCTAACATTACTGCAGGACACTTATTAATACACCTAATCGGAGGAGCTACTCTAGTATTAATAAA---TATTAGCCCACCAACAGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGCAGTAGCATTAATTCAAGCCTACGTATTCACCCTCCTAGTAAGCCTATATCTACATGATAATAC +>Coelodonta_antiquitatis_NC_012681 +------------ATGAACGAAAATCTATTCACCTCTTTCACTACCCCTACA---ATAATAGGACTACCTATTGTTATCTTAATTATCATATTCCCCAGCATTATATTTCCCTCACCCAAC---CGACTTATTAATAACCGTCTAATCTCCATACAACAATGACTACTCCGACTCACATCAAAACAAATAATATCCACTCACAACAGTAAAGGACAAACCTGAGCACTAATACTCATATCCCTTATCCTATTTATTGGTTCAACCAACCTGCTAGGACTACTACCACACTCATTTACACCCACTACCCAACTATCAATGAATCTAGGCATAGCCATTCCTCTATGAGCAGGAACGGTATTTGTAGGATTCCGCCATAAAACCAAAGCATCTCTAGCCCATTTCCTCCCTCAAGGAACACCTGTTTTCCTCATCCCCATACTAGTAATTATCGAAACCATCAGCCTATTTATCCAACCCATTGCCCTTGCCGTACGGCTAACAGCCAACATCACTGCAGGACATCTCTTAATACACCTAATTGGAGGAGCAACGCTGGCCCTAATAAAC---ATTAGCCCTACTACGGCCCTCATCACATTTATTATCCTCATTCTACTTACCATCCTTGAATTCGCTGTAGCCCTAATTCAAGCTTACGTATTCACTCTTCTAGTAAGCCTATACCTACATGACAACACC +>Uncia_uncia_NC_010638 +------------TAATGAACGAAAATCTATTCACCTCTTTCACTACCCCAA---CAATAATAGGACTGCCTATTGTCGTATTAATTATTATGTTCCCCAGCATTCTATTCCCTTCACCTA---ATCGACTAATTAATAACCGCCTAGTCTCACTCCAGCAGTGATTAGTACAACTAACGTCAAAACAAATATTAGCCATTCACAATCGCAAAGGACAAACTTGGGCCCTAATACTCATGTCCCTCATTCTATTTATTGGATCAACAAACCTGTTAGGCCTACTGCCCCACTCATTTACCCCAACTACCCAACTATCAATAAACTTAGGAATAGCTATTCCCCTATGAGCCGGTGCCGTAATCACCGGATTTCGCCACAAAACTAAAGCATCCCTAGCCCACTTTCTACCACAAGGAACACCAATCCCCCTGATCCCCATACTTGTAATTATTGAAACTATTAGCCTTTTTATCCAGCCCGTGGCTCTGGCCGTACGACTAACAGCTAACATTACTGCAGGCCACTTATTAATACACTTAATTGGAGGGGCTGCTCTGGCTCTAGCAA---ATATTAATGCCTCTATTGCTCTAATTACCTTTATTATTCTCATCCTACTAACAATCCTTGAGTTCGCTGTAGCCCTAATCCAAGCCTACGTCTTTACCCTACTTGTAAGTCTATATCTACATGACAATA +>Neotragus_moschatus_isolate_SUN_NC_020728 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTAT---AATTTTAGGCCTACCACTCGTTATCCTAATTGTAATATTCCCCAGCCTATTATTCCCAACATCAAA---TCGACTAATAAATAACCGCCTCATTTCCCTCCAACAATGAATACTTCAACTCGTGTCAAAGCAAATAATAAGCATCCACAACCCCAAAGGACAAACGTGAACATTAATACTGATATCCCTAATTCTATTCATTGGGTCAACAAACCTTCTGGGTCTACTACCCCACTCATTTACGCCAACCACACAGCTATCAATAAACCTAGGCATGGCCATTCCCCTATGAGCAGGAGCTGTAATCACAGGTTTCCGCAACAAACCCAAAGTTTCACTAGCCCACTTTCTACCACAAGGAACACCAACCCCACTAATCCCCATGTTAGTTATTATCGAAACTATCAGTCTTTTTATTCAACCAATAGCCCTTGCCGTACGATTAACGGCTAACATTACCGCAGGACACCTGTTAATTCACCTAATTGGAGGAGCCACCCTCGCACTAATAAG---CATTAGTACTACAACAGCCTTCATCACATTTATTATCTTAATTCTCCTAACAATTCTCGAATTCGCAGTAGCCATAATCCAAGCCTATGTATTTACCCTCTTAGTTAGCCTGTACCTGCACGACAATAC +>Antilocapra_americana_isolate_UAM_NC_020679 +------------ATGAACGAAAATTTATTTGCCTCTTTCATTACCCCAACA---ATTCTAGGTCTACCACTCGTTATCCTAATTATCATATTCCCCAGCCTACTATTTCCAACATCAAAT---CGATTAATGAATAACCGCCTCATTTCTCTCCAACAATGGGCCCTTCAACTAATCTCAAAACAAATAATAAGTATTCACAACCCTAAAGGACAAACATGAACATTAATACTTATGTCCCTAATCCTATTTATTGGATCAACAAATCTACTAGGCCTACTACCCCACTCATTTACACCAACTACACAACTATCAATAAATTTAGGCATGGCCATCCCCCTATGAGCAGGAGCTGTAGTCACAGGTTTTCGCAACAAAACCAAATCATCCCTCGCCCACTTCCTACCACAAGGAACACCAACACCCCTAATTCCAATACTAGTTATTATTGAAACCATCAGCCTTTTTATTCAACCAATGGCACTGGCTGTGCGACTAACAGCCAACATCACCGCAGGTCACCTACTGATTCATTTAATTGGAGGAGCCACACTCGCGCTAATAAAT---ATTAGCACCACAACGGCCTTTATCACATTTATTATTCTAATCTTACTAACAATTCTTGAATTTGCAGTAGCCATAATTCAGGCCTACGTCTTCACTCTCTTAGTCAGCCTATACCTGCACGACAACACG +>Coendou_insidiosus_NC_021387 +------------TAATGAACGAAAACCTATTTACCTCTTTTATTCCACCAA---CAATAATTGGTCTGCCTGTCGTCACAGCAATCATTCTATTTCCCAACATTCTATTTCCGTCATCTG---ATCGACTAATCAACAACCGTTTTATTACCTTCCAACAGTGACTTATTAAATTAATTCTGAAACAAATAATATTAATTCATAATATCAAAGGACAGAGCTGATCATTAATGTTAATTTCCCTAATCCTATTTATTGGCTCATCTAACCTTTTAGGTCTGCTGCCCCATTCATTCACTCCAACTACTCAACTATCCATAAATCTAGGAATAGCTATTCCCCTATGAGCAGGGACAGTAATCCTAGGATTCCGTTACAAAACCAAAGCATCCTTAGCTCACTTTCTTCCCCAAGGAACACCAATAGCTCTAACTCCAATACTCGTAATTATTGAAACAATTAGTTTATTTATTCAACCTATAGCTCTAGCTATCCGACTAACCGCTAACATTACAGCTGGTCATCTACTCATCCACCTAATTGGAGGGGCTACACTAGCTTTAACAA---CCATTAGTCCTATTACAGCTTTAATTCCATCTACTATCCTAATTCTTCTAATAATTCTTGAATTAGCAGTAGCATTAATTCAAGCTTACGTATTTACTCTACTAGTTAGCCTCTACCTACATGATAATA +>Canis_lupus_NC_008092 +------------AATGAACGAAAATCTATTCGCTTCTTTCGCTGCCCCCTC---AATAATAGGTCTCCCTATTGTGGTACTGATCGTCATATTCCCTTCCATTTTATTCCCAACACCCAG---TCGCCTAATCAATAATCGGTTAATCTCCATTCAGCAATGACTAATTCAACTAACATCAAAACAAATACTAGCAATTCATAACCAAAAGGGACGAACCTGAGCTCTCATACTTATATCACTAATTCTATTTATTGGCTCAACTAATCTACTTGGCCTACTACCTCACTCATTTACGCCCACAACACAACTCTCTATAAACCTCGGAATAGCAATCCCCCTATGAGCAGGGACAGTAATTACCGGTTTCCGCTATAAGACCAAAGCATCCTTAGCACACTTTCTACCCCAAGGCACCCCTCTTCCCCTAATTCCAATACTAGTAGTCATCGAAACTATTAGTCTATTTATTCAACCCATAGCTCTAGCCGTTCGATTAACCGCCAATATTACTGCAGGACACCTCCTAATCCATTTGATTGGAGGGGCTACCTTAGCTCTTATCAA---TATTAGCGCGACCACAGCTTTTATCACTTTTATTATTCTAATCCTACTTACGATCCTGGAATTTGCTGTTGCCTTAATTCAAGCCTATGTTTTTACCTTACTAGTGAGTCTATACTTACATGACAACAC +>Lepus_timidus_haplotype_tim_NC_024040 +------------ATGAACGAAAATCTATTCTCCTCTTTTATTACCCCAACA---ATAATAGGCTTACCAATCGTAATCCTAATTATTATATTCCCAACCCTTCTATTTCCTGCCCCTACC---CGACTGATCAACAACCGACTAGTCTCAGCCCAACAATGATTAGCCCAATTAATTCTAAAACAAATAATGATAATGCACTCCCCTAAAGGACGGACCTGATCCCTTATGCTAATCTCCCTAATTATATTTATTGGCTCAACTAACCTTCTAGGCCTCTTACCCCACTCGTTTACACCAACAACCCAATTATCAATAAATCTAGGGATAGCTATCCCACTATGAGCAGGAGCTGTAATTACAGGCTTCCGATACAAAACTAAAGCGTCACTAGCTCACTTTCTCCCGCAAGGAACACCTGTACCCCTTATTCCTATACTGGTAATTATTGAAACAATTAGCCTGTTCATTCAACCCATGGCCTTAGCTGTACGACTCACAGCCAACATTACAGCAGGCCACTTACTAATGCATCTTATCGGAGGCGCAGCACTCGCCCTAATCTCA---ATTAGTCCAACAACAGCCCTAATTACTTTTATTATTCTTATTCTCCTAACAATTCTAGAATTTGCTGTAGCCCTAATTCAAGCCTACGTTTTTACCCTTCTTGTAAGCCTATATTTACACGATAACACC +>Oryx_leucoryx_isolate_Saudi_NC_020732 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTA---TAATTCTAGGCCTTCCCCTTGTTACCCTAATCGTCTTATTCCCCAGCTTACTGTTTCCAACATCAA---ACCGACTAATTAACAACCGCCTCATCTCTCTCCAACAATGAATACTCCAACTTGTATCAAAACAAATAATAAGCATTCACAATGCCAAAGGACAAACATGAACACTAATACTAATATCCCTAATTCTATTCATTGGATCAACAAACCTGCTAGGCCTACTACCCCACTCATTTACACCAACCACACAACTATCAATAAATCTGGGCATGGCTATCCCTCTATGAGCAGGAGCTGTCATTACAGGCTTCCGTAACAAAACTAAGGCATCACTTGCCCATTTCCTACCACAAGGAACACCAACCCCACTAATTCCAATGCTAGTAATTATTGAGACTATTAGCCTTTTCATCCAACCAATAGCCCTTGCTGTACGACTAACAGCCAATATCACAGCAGGACACCTACTAATTCATTTAATCGGAGGAGCCACCCTAGCACTAATAA---ACATTAGCACCACAACTGCCCTTATTACGTTCATTGTCCTAATTCTACTAACGATTCTCGAGTTCGCAGTAGCTATAATTCAAGCTTACGTATTTACCCTCTTAGTCAGCTTATACCTGCACGATAACA +>Manis_pentadactyla_NC_016008 +------------AATGAACGAAAATCTATTCACCTCTTTCATTACCCCAGT---AATAATAGGGATCCCTATTGTAACAATTATCATTATGTTCCCAGTAATCCTCTTCCCAACATCAAA---CCGACTAATCAACAACCGCATTGTATCCATACAACAATGACTCCTAAAACAAACATCCAAACAAATAATAAGCATCCACAACTACAAAGGACAGACCTGAACCCTGATATTAATAACACTAATCATTTTCATCGCATCTACTAACCTACTAGGCCTGCTACCCCACTCATTCACCCCCACAGCCCAACTGTCAATAAACCTGAGCATAGCCGTTCCTCTATGGGCAGCCACCGTAGTCACAGGTTTTCGACACAATACAAAAACATCTTTAGCCCACTTCCTACCCCAGGGAACACCAACCCCCCTTATCCCAGTGCTAGTGATCATTGAAACAATCAGCCTGCTAATCCAACCCATAGCGCTCGCAGTACGACTGACAGCCAACATCACCGCCGGCCACCTGTTAATACACCTAATCGGAAGCGCAACCCTTGCCCTAATATC---AATCAACCCCACCGTGGCCACAACTACCTTCATCGTCCTAGTCCTGCTTACAATCCTTGAATTCGCAGTCGCACTCATTCAGGCCTACGTATTCACTCTTCTAATCAGCCTCTACTTACATGATAACAC +>Balaenoptera_omurai_NC_007937 +------------ATGAACGAAAATTTATTTACCCCTTTTATAACTCCAGTA---ATACTAGGTATTCCTATTACCACCCTAATCATTATACTTCCATCCATTTTATTCCCTACACCAAAT---CGACTAATCAACAACCGTATAATCTCCATTCAACAATGATTAACCAAACTCACATCAAAACAACTAATAAATGTACACAGCCCTAAAGGACAAACTTGATCTCTAATACTCATTTCACTACTCCTATTTATTGCTTCCACTAACCTCCTTGGAATATTACCCCACTCATTTACACCCACCACACAACTCTCAATAAACGTAGGAATGGCTATCCCCTTATGGGCTGGTGCCGTTGCCGCAGGCTTTCGCAACAAAACAAAAATATCCTTAGCACACCTACTACCACAAGGCACACCCACTTTTCTTATCCCTATACTAGTAATCATTGAAACCATCAGCCTATTCATTCAACCAGTAGCACTAGCCGTACGACTAACTGCCAATATCACAGCAGGTCACCTACTAATACATCTAATTGGAGAAACAACCCTTGCACTAATAAGT---ACTAGCCTATTTACAGCTCTTATCACATTTACTATCCTTGCTCTATTAACCATTCTTGAATTCGCTGTCGCCCTCATTCAAGCTTACGTATTTACCCTCCTAGTAAGCCTATACCTGCATGATAACACA +>Dugong_dugon_NC_003314 +------------TAATGAACGAAAACCTATTTACCTCTTTCATTACCCCTA---CAATAATAGGCTTACCCATCGTTATTCTTGTCATCGTTTTCCCAGCAATACTATATCCCTCCCCAA---ACCGACTTATTAACAACCGCCTAATCTCTATCCAACAATGACTAGTTCAACTCATCCTCAAACAAATGTTACTAATCCATAACTCTAAAGGCCGCACCTGAGCTCTTATACTAATTTCACTAATTCTATTCATCGGTTCAACTAATCTCCTAGGCCTAGTCCCCTATACATTTACTCCTACCACTCAACTATCAATAAACCTAGGCATGGCTATCCCCCTGTGAGCTGGGGCAGTAATTACGGGCTTTCGGCACAAGGCTAAAGCTTCACTAGCCCATTTCCTCCCACAAGGTACACCGATTACATTGATCCCCATACTCGTGGTAATCGAGACCATCAGCCTATTTATTCAACCAATAGCCTTGGCCATCCGTCTAACCGCTAACATCACGGCCGGCCACCTACTCATGCATTTAATCGGAGGAGCTGTCTTAGCTCTTACAT---CTATTAGCCCTGCAGCCGCTACAATCACTTTTATTATCCTCCTGTTACTTACGATCTTAGAATTTGCAGTGGCCCTGATCCAGGCATATGTATTTACACTCCTAGTTAGCCTATACTTACATGACAATA +>Rhyncholestes_raphanurus_NC_005829 +------------AATGAACGAAAATCTATTTGCCCCATTTATTACCCCTAC---AATCTTAGGTATTACAACTTTACCAATCATCATATTACTACCATGTCTAATCCTAACATCCCCCAA---ACGATGACTGCCTAATCGCATTCAAACCCTACAAATTTGACTAATTCGACTAATTACCAAACAAATAATAGCCATACATAACAAACTAGGCCAATCATGAACTCTGATACTTATATCACTAATCTTATTTATTGCTTCTACTAACCTTTTAGGCCTACTACCATACTCATTTACTCCTACCACACAACTATCTATAAACATTGGCATAGCCTTACCACTATGGATAGGAACAGTACTATTAGGATTCCGAAACAAACCTAAAGTATCCTTAGCACACTTTTTCCCTCAAGGGACACCTACTCCACTAATCCCTATACTTATTGTAATCGAAACAATCAGCTTATTTATTCAACCCCTAGCATTAGCCGTCCGATTAACAGCCAACATTACTGCAGGCCATCTTTTAATTCACCTAATCGGATCCGCAACACTAGCCCTATCCTC---TATCAGTATAGCAGTATCTACCATTACCTTTGCTGTTTTATTTCTACTTACAATCTTAGAACTAGCAGTAGCAATAATTCAAGCTTATGTTTTCACTTTACTAGTAAGCTTATACTTACACGATAATAC +>Cephalophus_dorsalis_isolate_CAR35_NC_020687 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTATA---ATACTAGGCCTACCCCTCGTTACCCTCATCGTCTTGTTTCCCAGTTTATTATTTCCAACATCAAAT---CGACTAGTCAACAATCGCCTTATTTCCCTCCAACAATGACTACTCCAACTCATCTCAAAACAAATAATAAGCATCCATAACTCTAAAGGACAAACATGAGCACTAATACTAATATCCTTAATTCTATTTATTGGATCAACAAATCTATTAGGTTTACTACCCCACTCATTTACACCAACCACGCAACTGTCAATAAACCTAGGTATGGCCATTCCTCTGTGAGCAGGAGCTGTCGTCACAGGCTTCCGCAATAAAACTAAAGCATCACTCGCCCACTTCCTACCACAAGGAACACCAACCCCATTAATTCCAATACTAGTAATTATTGAAACTATTAGCCTTTTTATTCAACCGGTAGCCCTTGCCGTACGACTAACAGCCAACATCACAGCAGGACACCTATTAATTCACTTAATCGGAGGAGCTACACTTGCACTAATAAGC---ATTAGCACCACAACAGCCCTCATTACATTTATTATCTTAATCCTACTAACAATTCTTGAATTTGCAGTAGCCATAATTCAAGCCTATGTATTTACCCTCCTAGTCAGCCTATACCTGCACGACAACACA +>Hylopetes_phayrei_NC_026443 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAA---CACTAATAGGTATGCCCATCATTATCTTAATCATCTCATTTCCCAATATCTTACTTCCTACCCCAA---ATCGACTAATTAATAACCGACTTGTATCTTTCCAGCAATGACTAATCCAACTCGTACTAAAACAAATAATGGCAATACACAACTTAAAAGGACGAACTTGATCCCTAATATTAATTTCCCTTATCATATTTATTGGCTCTACTAACCTCCTAGGACTTCTACCCCACTCATTTACACCTACCACCCAATTATCAATGAATTTAGGAATAGCCATCCCTTTATGAGCAGGAGCAGTAATTACTGGTTTCCGCTATAAAACTAAAGCATCCCTTGCTCACTTTCTTCCGCAAGGCACTCCAATCCCCTTAATTCCAATACTTGTAATTATCGAGACAATTAGCCTATTCATTCAACCCATAGCCCTAGCTGTTCGACTAACCGCTAACATTACAGCCGGCCACTTACTTATACACCTAATTGGAGGAGCCACCTTAGTCTTAACTT---CTATTAGCCCCCCAACCGCAATAATCACTTTTATTATCCTCATTTTATTAACAGTTCTAGAATTTGCCGTAGCATTAATTCAAGCATACGTATTTACTCTACTTGTAAGCCTCTATCTACATGATAACA +>Capreolus_pygargus_isolate_Cp5_NC_025271 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTGTCCCAAT---AGTTTTAGGCCTCCCACTTGCCACTCTTATTATTATTTTCCCCAGTCTGTTGTTTCCTACATCCAA---TCGTCTAATCAGTAACCGTCTTATCTCCCTTCAACAATGAATACTTCAACTTGTATCAAAACAAATGATAGGAATTCACAATACTAAGGGACAAACATGAGCATTGATACTTATATCCCTAATTTTATTTATTGGATCAACAAATCTCCTGGGACTACTACCCCACTCATTCACACCAACTACACAACTATCCATAAACTTAGGCATAGCTATTCCTTTATGAGCAGGCACTGTAATTACAGGCTTCCGCAATAAAACTAAAGCATCACTCGCCCATTTTCTTCCACAAGGAACACCTACCCCATTAATCCCAATACTAATTATTATTGAGACTATTAGCCTATTCATTCAACCAATTGCCCTAGCCGTACGATTAACAGCCAATATTACCGCAGGGCACTTGTTAATTCACCTAATCGGAGGAGCCACACTTGCACTAATAAG---TATTAGCACTACAATAGCATTTATTACATTTATTATTCTAGTCTTATTAACAGTTCTTGAATTTGCAGTAGCTATGATTCAGGCTTACGTATTTACTCTTTTAGTTAGCCTTTACCTGCACGATAACAC +>Stenella_attenuata_NC_012051 +------------ATGAACGAAAATCTATTTGCCTCTTTCATAATCCCAATT---GTACTAGGTATTCCTATTACTACTCTAATTATTATATTTCCCACTATGTTATTTCCAACACCAAAT---CGATTAATCAATAACCGCATGGTCGCCATCCAACAATGACTTACCAAGCTCACATCAAAACAACTAATAATTACACATAGCCCCAAAGGACAGACCTGATCTCTAATACTCATCTCACTTTTCCTTTTTATCGCTTCCACAAACCTTCTTGGAATACTACCTCACTCATTCACACCTACTACTCAACTCTCTATAAATTTAGGCATAGCTATTCCATTATGAGCTGGCACCGTCTTCATTGGATTCCGTAATAAAACAAAAATATCTCTAGCCCACCTTTTACCACTAGGCACACCCACTTTCCTAATTCCCATATTAGTAATAATCGAAACTATTAGCCTATTTATTCAACCCTTAGCCCTAGCAGTGCGGCTGACAGCGAACATCACAGCAGGTCACCTACTACTACATCTAATTGGAAGCGCAACCCTTGCATTAATAAGC---ATTAGTCTATTCACAGCTCTCATCACATTTATTATTCTCACCCTATTAATCATCCTCGAATTCGCTGTAGCCCTAATCCAAGCCTACGTATTCACCCTACTAGTAAGCCTATACCTGCAAGACAATACA +>Pygathrix_nemaeus_NC_008220 +------------TAATGAACGAAAATTTATTTACCTCATTTACACACCCAA---CACTCCTAGGGCTACCAGCCGTAGTACCTATTATTCTATTTCCTACATTACTACTTCCAACCTCAA---AATATCTTATTAATAATCGACTAATTACTATTCAACAAAATCTAATTCAGCTAATCGTAAAACAAATAATAATAATTCATAATATTAAAGGACAAACCTGGTCTCTAATACTAATATCCCTAATCATTTTTATTGCCACAACTAACCTTCTCGGACTCTTACCCCACTCATTTACACCTACCGCCCAACTATCAATAAATCTAGCTATAGCAATCCCTCTATGAGCAGGTACAGTAATCACAGGCCTTCGCTTCAAAACTAAAAGCTCCTTAGCGCACTTTTTACCACAAGGTACACCCACACTACTTATCCCCATATTAGTAGTTATTGAAACCATCAGTTTATTTATTCAACCAGTAGCCCTTGCTGTACGCCTAACCGCCAATATTACAGCAGGACATCTACTTATGCACCTAATTGGAAGTGCTACGCTAGTACTATCAA---CCATCAGCCTCTCTATAACCTCACTAACTTTAGTGCTTCTAGTATTATTAACAATTCTAGAAATAGCAGTCGCCCTAATTCAAGCCTACGTTTTCACACTATTGGTAAGCCTTTATCTACATGACAACA +>Globicephala_macrorhynchus_NC_019578 +------------AATGAACGAAAATCTATTTGCCTCTTTCATAGTCCCAAT---CACGCTAGGCATTCCCATCACCACTCTAATTATTATATTTCCCACCATACTATTCCCAACACCAAA---CCGATTAATCAATAACCGTATAATTACTATCCAACAATGACTTACCAAACTCACATCAAAACAACTGATAGTGACACATAATCCCAAAGGACAAACCTGATCTCTAATACTCATCTCACTTTTCCTTTTCATCGCCTCCACAAACCTTCTTGGAATATTACCTCACTCATTCACACCTACTGCTCAACTCTCTATAAACTTAGGCATAGCCATTCCATTATGAGCTGGTACCGTCTTTATCGGTTTCCGTAATAAGACAAAAATATCTCTAGCCCACCTTTTACCATTAGGCACACCCACTTTCCTAATTCCTATGCTGGTAATAATCGAAACTATCAGCCTATTTATTCAACCCTTAGCTCTAGCAGTACGGCTAACAGCGAACATCACAGCAGGTCACCTATTATTACACCTAATTGGAAGTGCAACTCTTGCATTAATAAG---CATTAACCTATTCACAGCTCTCATCACATTTATTATCCTCACTCTATTAGTTATCCTCGAATTCGCTGTAGCCCTAATCCAAGCCTACGTATTCACCCTACTAGTAAGCCTATACTTGCAAGACAATAC +>Homo_sp_Altai_NC_013993 +------------ATGAACGAAAATCTGTTCACTTCATTCATTGCCCCCACA---ATCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATTGATCCCCACCTCCAAA---TATCTCATCAACAACCGACTAATTACCACCCAACAATGACTAATCCAACTAACCTCAAAACAAATGATAGCCATACACAACACTAAGGGACGAACCTGATCTCTTATACTAGTATCCTTAATCATTTTTATTGCCACAACCAACCTCCTCGGGCTCCTGCCTCACTCATTTACACCAACCACCCAACTATCTATAAACCTAGCCATGGCCATCCCCTTATGAGCGGGCGCAGTGATTATAGGCTTTCGCTCTAAGATTAAAAATGCCCTAGCCCACTTCTTACCACAAGGCACACCTACACCCCTTATCCCTATACTAGTTATTATCGAAACCATCAGCCTACTCATTCAACCAATAGCCCTAGCCGTACGCCTAACCGCTAACATTACTGCAGGCCACCTACTCATGCACCTAATTGGAAGCGCCACACTAGCAATATCAACT---ATTAGCCTTCCCTCTACACTTATCATCTTCACAATTCTAATTCTACTGACTATCCTAGAAATCGCTGTCGCCTTAATCCAAGCCTACGTTTTTACACTTCTAGTAAGCCTCTACCTGCACGACAACACA +>Mustela_nivalis_voucher_YP1_NC_020639 +------------TAATGAACGAAAATCTATTTTCCTCATTCACTACCCCTA---CAATAATAGGACTACCCATCGTCATCCTCATTACCATATTCCCAGGTATTATATTCCCATCACCTA---GCCGACTGATTAATAACCGACTCATTTCTATTCAACAATGATTAGTTCAACTGACATCTAAGCAAATACTATCTATTCACAATCAGAAAGGACAAACCTGAGCATTAATACTAATATCCTTGATCCTATTTATTGGATCTACTAACCTTCTAGGCCTCCTACCCCACTCATTTACCCCTACCACACAACTGTCCTTAAACCTGGGAATAGCTATCCCCTTATGAGCAGGTACAGTAATTACTGGTTTCCGATATAAAACAAAAGCCTCTTTAGCCCACTTTCTTCCACAAGGGACCCCACTTCCTCTAATTCCCATGCTCATTATTATCGAAACTATCAGTCTATTTATTCAACCCATAGCCCTAGCCGTGCGACTAACAGCTAACATTACAGCGGGCCACTTGTTAATTCACCTAATTGGAGGGGCCACCTTAGCCCTAATAA---GCATCAGTACTATCACAGCAATGATTACCTTTACTATCCTCGTCCTATTGACTATCTTAGAATTTGCGGTAGCCCTTATTCAGGCCTACGTCTTTACCCTCCTAGTGAGCCTATACTTACATGACAACA +>Lepus_capensis_NC_015841 +------------AATGAACGAAAATCTATTCTCCTCTTTTATTACCCCAAC---AATAATAGGTTTACCAATCGTAATCCTAATTATTATATTCCCGACCCTTCTATTTCCTGCCCCTAC---CCGACTAATCAACAACCGACTAGTCTCAGCTCAACAATGATTAGCCCAATTAATTCTAAAACAAATAATAATGATGCACTCCCCTAAAGGACGGACCTGATCCCTCATGCTAATTTCCCTAATTATATTTATTGGCTCAACTAATCTTCTAGGCCTCTTACCTCACTCGTTTACACCAACAACCCAATTATCAATAAATCTAGGGATAGCTATCCCACTATGAGCAGGAGCTGTAATTACAGGCTTCCGATATAAAACTAAAGCGTCACTAGCTCACTTTCTCCCACAAGGAACACCTGTACCCCTTATTCCTATGCTAGTAATTATTGAAACAATTAGCCTGTTCATTCAACCCATGGCCTTAGCTGTACGACTCACAGCCAACATTACAGCAGGCCACTTACTAATGCATCTTATCGGAGGCGCAGCACTCGCCCTAATCTC---AATTAGTCCAACAACAGCCCTAATTACTTTTATTATTCTTATTCTCCTAACAATTCTAGAATTTGCTGTAGCCCTAATTCAAGCCTACGTTTTTACCCTTCTTGTAAGCCTATACTTACACGATAATAC +>Cricetulus_griseus_NC_007936 +------------ATGAACGAAAATTTATTCTCCTCTTTCATTACCCCAACC---CTAATAGGATTACCTATTATTATTCTTATTATTATATTTCCACTTGTCATTATGACATCATCAAAA---CGCTTAGTAAACAATCGATTTCACACCTTCCAACAGTGATTAATTAAACTAATTACTAAGCAAATAATAGCAATTCACTCACCTAAAGGACGAACCTGATCACTTATACTGGCATCATTAATTATCTTTATTGGCTCAACAAATCTGCTAGGTCTACTACCACACACATTCACTCCTACAACTCAATTATCTATAAACCTAGGAATAGCTATCCCACTATGAGCTGGAGCTGTAATCTTAGGGTTTCGACATAAAATAAAAGACTCACTTGCTCACTTTCTCCCACAAGGAACCCCTATTCCACTTATCCCAATACTAGTAATTATTGAAACAATTAGCTTATTTATTCAACCTATAGCCTTAGCTGTACGTTTAACAGCTAATATCACCGCAGGACATCTGCTAATGCACTTAATTGGAGGAGCTACACTAGTCCTAACCTCA---ATCAGCCTACCAACTGCTATAATCACATTTATTATCTTAATTATATTAACTATCCTAGAGTTCGCTGTAGCCTTAATTCAAGCCTATGTATTTACACTACTAGTAAGCCTATATCTACATGATAATACG +>Potamochoerus_porcus_isolate_GLC18_NC_020737 +------------TAATGAACGAAAATCTATTTACCTCTTTCATTACCCCTA---CGATAATAGGACTACCTATTGCTACCTTAATCATCGTCTTTCCTAGCCTATTATTCCCCACACCCA---AACGACTCATTAACAACCGCACAGTCTCTATTCAACAATGGTTAATCCAGCTAGCATCTAAACAAATAATAGCCATCCATAACCAAAAGGGCCAGACCTGATCACTAATGCTCATATCTCTAATCATATTCATTGGCTCAACAAATATCCTAGGCCTATTACCACACTCATTCACACCTACCACGCAACTATCAATAAACTTAGGCATAGCAATTCCCCTGTGATCAGCGACTGTATTCACAGGATTCCGCCATAAAACTAAGACATCTCTAGCTCACTTTCTACCACAAGGAACACCTGCTCCACTAATTCCCATGCTCGTAATTATCGAAACCATTAGCCTATTTATTCAACCAGTAGCCCTAGCTGTACGATTAACAGCAAACATCACAGCAGGACACCTGCTAATTCACTTAATCGGAGGAGCCACCTTAGCTCTACTTA---GCATCAACACCATAACAGCCTTTATCACATTCACTATCCTTGTTCTACTGACTATTCTTGAATTCGCAGTGGCCCTAATCCAAGCCTATGTATTCACACTACTAGTAAGCCTGTATTTACATGACAACA +>Taurotragus_derbianus_NC_020618 +------------AATGAACGAAAACCTATTTGCCTCTTTCATTACCCCAAT---AATCTTAGGCCTCCCCCTTGTAACCATCATCGTCTTATTCCCCAGCCTACTATTTCCGACATCAAA---TCGACTAGTAAATAATCGCCTCATCTCCCTCCAACAATGAGCACTCCAACTTGTATCAAAACAAATAATGGCTATTCACAATACTAAAGGACAAACATGAACACTAATATTAATGTCCCTAATCTTATTCATCGGGTCAACAAATCTACTAGGTCTCCTCCCTCACTCATTTACACCAACCACCCAACTATCAATAAACCTAGGTATAGCCATCCCCCTGTGAGCAGGAGCCGTCATCACAGGATTTCGCAGCAAAACTAAAGCATCACTCGCTCACTTCTTGCCACAAGGAACACCAACCCCACTAATCCCAATACTAGTTATCATTGAAACCATTAGCCTTTTTATTCAACCAGTGGCTCTTGCCGTACGATTAACAGCCAACATTACCGCAGGCCACTTACTAATTCACCTGATCGGAGGAGCTACACTCGCACTAATAAA---CATTAGCACCACAACAGCTTTCATCACATTTATTATCCTGGTCCTGTTGACAATCTTAGAATTCGCAGTAGCCATAATTCAAGCCTATGTATTTACCCTCTTAGTTAGCCTATACTTACATGACAACAC +>Saimiri_boliviensis_NC_021966 +------------ATGACCCAAAACTTATTCACCATCTTTAATATCCCAGTA---GTCCTAGGAATACCCCTAGCAGTACTAATTATTATATTTCCCTCCATACTAATCTTACCCCCTAAC---AACACTATCAACAACCGATTCTCATCCATTCAACAATGACTAGTTCAGCTCACACTAAAACAAATAATAATCACCCATTCTACTACAGGACGAACCTGATCTCTAATACTCCTAACCCTAATTACCTTTATTTCCTTAAATAACCTTCTTGGACTCACACCCTACGCATTTACACCCACCACTCAACTATCAATAAATATTGGTATAGCAATCCCACTATGAATAGCAACCGTACTTATAGGACTTCGACTTAAAACAAAAACATCCCTTGCTCACTTTCTGCCCCAAGGAACACCAACTCTACTCATTCCCATGCTCATCATCATTGAAACCATTAGCCTCTTTATTCAACCAGTAGCACTAGCAGTACGGCTAACAGCAAACATTACAGCAGGTCACCTACTAATACACCTATTAGGGACTGCTTCACTCACCCTTCTATCT---ATTTACCTCTCTTCCTCTCTAGCTACTATTATCGTCATTATCTTACTAATTACCCTAGAATTAGGCGTAGCCCTAATCCAAGCTTACGTCTTCACACTTCTAGTCAGTCTTTACCTACACAACAATTCA +>Tarsius_wallacei_voucher_SM27_NC_024053 +------------TAGTGAACGAAAATTTATTCGCCTCTTTCATTACCCCTA---CAATAATAGGTCTACCAGTAGTAGTATTAATTATTATATTCCCAACCATACTATACCCAACTTCAA---ACCGCTTAATTAACAATCGACTTATCTCCCTACAACAATGATTAATTCAACTAGTAACTAAACAAATAATGATGATACATAATAATAAAGGTCAAACTTGATCACTAATACTAATTTCCCTTATTCTTTTTATTGGGTCTACAAACCTATTAGGCCTACTACCCCATTCTTTCACACCCACCACTCAACTATCAATAAACCTGGGAATAGCCATCCCCCTATGAGCCGGAGCAGTAATTACTGGTTTCCGCCACAAAACTAAGGCGTCCCTAGCCCATTTCCTCCCACAAGGAACTCCAATTCCACTAATTCCCATGCTAATTATCATTGAGACTATTAGCCTCTTTATTCAACCAATAGCTTTAGCCGTACGACTAACCGCTAACATCACAGCAGGTCATTTACTTATACATTTAATCGGAGGAGCAACTCTAGTTCTATCAT---CAATTAACTCCATTGCAGCATCAACTACATTTATTATTCTCATCCTACTTACCATCCTCGAAATAGCAGTAGCCCTTATCCAAGCCTATGTTTTTACACTTCTAGTAAGTCTTTACCTACATGACAATA +>Rattus_lutreolus_NC_014858 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAAC---AGTAATAGGCCTTCCAATTGTCGTAACCATTATTATATTCCCATCAATTCTATTCCCATCATCAGA---GCGCCTGATTACCAACCGCCTACACTCATTTCAACACTGGCTAATCAAACTTATCATCAAACAAATAATATTAATCCATACACCAAAAGGACGAACCTGAACACTGATAATTGTATCACTAATTATATTTATTGGCTCAACTAACCTCTTAGGCCTACTTCCTCACACATTCACCCCTACCACCCAACTGTCCATAAACCTAAGCATAGCCATCCCTCTATGAGCAGGAGCCGTAATTTTAGGGTTCCGACACAAACTAAAAAATTCTTTAGCCCATTTCCTACCACAAGGAACACCCATTTCACTCATTCCTATACTAATTATCATTGAAACCATCAGCTTATTCATTCAACCAATAGCACTAGCAGTACGACTAACAGCAAACATCACAGCAGGCCACCTATTAATACACCTAATTGGAGGAGCTACTTTAGTACTCATGAA---CATCAGCCCACCAACCGCCACAATCACATTTATTATTCTTCTTCTACTTACAGTACTTGAATTTGCCGTAGCCTTAATTCAAGCCTATGTATTTACTCTCCTAGTAAGCCTGTACCTACATGATAACAC +>Neophoca_cinerea_NC_008419 +------------ATGAACGAAAATCTATTCACTTCTTTCGCTTCCCCTACA---ATAATGGGTCTTCCAATCGTAACCCTAATTATCCTATTTCCAAGTGCACTATTCCCTTCACCAGGC---CGACTGATCAATAACCGCTTCACCTCTATTCAACAGTGACTAGTCCAATTAACATCAAAACAAATAATAATAATTCACAATCACAAAGGACAAGCGTGGACATTAATACTTATATCGCTTATTATATTTATTGGGTCTACCAATCTACTGGGCCTGCTACCGCACTCATTTACTCCCACTACCCAACTGTCCATAAACCTAGGAATGGCCATCCCCCTATGAGCAGGAGCAGTTGCTATAGGGTTACGACACAAAACTAAAGCATCCTTGGCCCACTTCCTGCCCCAAGGGACACCCTCCCCTCTTATCCCAACATTAGTAATCATTGAATCTATTAGCCTATTTATTCAACCCATAGCCCTAGCCGTGCGACTGACAGCCAACATTACTGCAGGTCACCTACTAATTCACCTAATCGGTGGAGCTACCCTAGCCCTCACTAAC---ATCAGTATAATTGCGGCCCTTATCACTTTCATTATCCTCGTCTTACTCACAGTCCTTGAGTTTGCTGTAGCCTTGATCCAAGCCTACGTCTTCACTTTACTAGTAAGCCTATACTTACACGATAACACC +>Echymipera_rufescens_australis_NC_007632 +------------TAATGAACGAAAATCTATTTGCCCCATTCATCACCCCTA---CAATTCTAGGTGTTACAACCCTACCTATCATTATATTTTTTCCTTGCCTAATTCTTACAACTCCAA---AACGTTGACTACCTAATCGAATTCAAATACTACAAATATGACTAATTCGCTTAATTACTAAACAAATAATAATAATGCATAATAAACAAGGACGATCCTGAGCCCTAATGCTAATATCATTAATTTTATTCATCGCCTCTACTAATCTCCTAGGTCTTTTACCATATTCATTTACTCCAACTACTCAACTATCTATAAATATTGGTATAGCCTTACCACTATGAATGGGCACTGTATTAATAGGTTTTCGAAATAAACCAAAAGCATCACTAGCCCATTTTTTACCTCAAGGTACACCTACTCCTCTAATTCCTATATTGATTATCATCGAAACTATTAGCTTATTCATTCAACCTATTGCTCTAGCAGTTCGACTCACCGCAAATATTACAGCAGGCCACCTATTAATTCACCTAATCGGATCAGCAACTTTAGCATTAACAT---CTATCAGCATTTCAATCTCAGCAATTACCTTTATTATCCTATTTTTACTAACAATCTTAGAACTAGCTGTAGCTATAATCCAAGCATATGTTTTCACACTTTTAGTTAGTCTATACTTACATGACAACT +>Aotus_azarai_azarai_NC_018115 +------------AATGAACCAAAATTTATTTACCTCTTTCAATATCCCAAT---AATATTAGGAATCCCCTTAGTAGTATTAATTATTTTATTTCCTATCACATTAATTATGCCCTCCAA---CAAGCTAATCAACAACCGACTTTCTTCTCTTCAACAATGATTAATTCAACTGACACTAAAACAAATGATAATAGTCCATACCAATAAAGGACGAACATGATCCCTTATACTCTTAGCTCTAATCTCCTTCATTGCTCTAAATAACCTCCTTGGACTCACACCCTATGCATTTACACCCACTACCCAACTATCAATGAACCTAGGCATAGCAATTCCCCTATGAGCAGCAACCGTATTTATAGGACTTCGATTCAAAACAAAGGCGTCTCTTGCCCACTTCCTACCCCAAGGAACACCCGTCCCACTTATCCCAATACTAATCATTATTGAAACAATTAGCCTGTTTATCCAGCCAATAGCACTAGCTGTACGATTAACAGCCAATATTACAGCAGGCCATCTACTAATACACTTGCTTGGGGATACTGCACTAACCCTTATATC---AATTTATGTATCTTCCTCTACAATCACCATTATTATTATTATCTTACTGATTACTCTAGAGTTAGGTGTAGCTCTAATTCAAGCTTATGTCTTTACTCTTCTAGTAAGTCTATACTTACACGACAACTC +>Nectogale_elegans_NC_023351 +------------ATGAACGAAAACTTATTTGCCTCTTTCGCTACCCCAACA---ATAATAGGACTCCCTATTGTAATTTTAATTATTATATTCCCAAGCATCATATTTCCAAATCCTAGT---CGACTTATTAACAACCGTCTAGTAACACTGCAACAATGACTAATCCAATTAACCTCAAAACAGATAATAATAATCCATAACCAAAAAGGACAAACATGAACACTAATACTTATATCACTTATTCTTTTCATTGGCTCAACTAATCTTTTAGGATTATTACCTCATTCATTTACACCTACAACTCAACTCTCAATAAACTTAGGTATAGCTATCCCACTTTGAGCTGGTGCAGTTATTACAGGCTTTCGATATAAAACAAAAGCTTCACTAGCCCATTTCCTCCCTCAAGGAACTCCTTTACCACTTATTCCCATATTAATTATTATCGAAACAATTAGTTTATTTATTCAACCCATGGCACTTGCTGTACGATTAACGGCAAACATTACTGCCGGACATTTATTAATTCATCTCATCGGAGGTGCAACACTTGTACTTATAAGT---ATTAGCCCCATCACAGCATTTATTACTTTCATTATTCTTGTTATATTAACAATTCTTGAATTTGCTGTAGCACTAATTCAAGCCTACGTCTTTACTCTTCTTGTCAGCCTATATCTGCATGATAATACC +>Vicugna_vicugna_NC_013558 +------------TAATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAA---CAATAATAGGACTTCCTATTGTTACCCTTGTTGTTATATTCCCAAGTATATTATTTCCAACTCCTG---CCCGACTAATTAATAACCGCTTAATCTCTTTTCAACATTGGCTAATTCGACTCACATCTAAACAAATAATAACTATTCACAACCACAAAGGACAGACCTGATCCTTAATGCTAATGTCTCTAATTATATTTATCGGGGCTACTAACCTTCTAGGACTCCTTCCACACTCATTTACTCCTACCACACAGCTATCAATAAACCTAGGCATGGCAGTTCCTCTATGGGCTGGGACTGTAGTCACTGGCTTTCGCAATAAAACGAAAGCATCACTAGCGCACTTCCTCCCCCAAGGAACGCCCACACCACTAATCCCCATATTAGTAATTATCGAAACTATCAGCCTGTTCATTCAACCCGTGGCCCTGGCCGTTCGACTAACAGCTAACATCACAGCAGGCCATTTATTAATGCACCTAATTGGAGGGGCTACTCTAGCCTTAATAA---ATATCAGTACACTGACAGCCCTCCTTACTTTTGTGGTCCTAGTTTTACTTACAATCCTCGAATTTGCCGTGGCTATAATCCAAGCCTATGTTTTTACCCTACTAGTAAGTCTATACCTACATGACAATA +>Procapra_gutturosa_isolate_ED_NC_020738 +------------AATGAACGAAAATTTATTTGCCTCATTCATTACCCCAAT---AATACTAGGCCTTCCTCTCGTAACCCTAATTGTCTTGTTTCCCAGCCTATTATTTCCAACATCAAA---CCGACTGATAAATAACCGCCTTATTTCTCTTCAACAATGAGTACTTCAACTTGTATCAAAACAAATAATAAATATTCATAACCCCAAAGGACAAACATGAGCATTAATACTAATATCTCTAATTCTATTTATTGGGTCAACAAATTTATTAGGCCTACTACCCCACTCCTTTACACCAACCACACAACTATCAATAAACCTAGGCATAGCTATCCCCCTATGAGCAGGGGCTGTAATTACAGGCTTTCGCAACAAAACTAAAGCATCACTCGCCCACTTCCTACCACAAGGCACACCAACCCCTTTAATCCCCATGCTAGTAATCATTGAAACTATCAGCCTATTCATTCAACCAATAGCCCTCGCCGTACGACTGACAGCCAATATCACAGCAGGACATTTGCTAATTCACTTAATCGGAGGAGCTACACTTGCACTAATGAG---TATCAGCACTACAACAGCCTTCATCACATTCATTATCTTGATCTTATTAACAATCCTCGAATTCGCAGTAGCCATAATTCAAGCTTACGTATTTACCCTTCTAGTTAGCCTATATCTACACGACAACAC +>Hyperoodon_ampullatus_NC_005273 +------------ATGAACGAAAATCTATTTGCCTCTTTTACAATCCCAATA---ATACTAGGTATCCCTATCGTTACCTTAATCATTGTATTCCCTACTATTTTATTCCCTACACCAAAC---CGACTAATCAACAACCGCACAATTTCCCTCCAACAATGATTGACTAAACTCACATCAAAACAACTAATAAATATACACAACCCCAAAGGCCAAACTTGATCTTTAATACTCATTTCACTCCTCTTATTTATTGCCTCTACAAACCTTCTCGGAATGCTACCTCACTCGTTTACACCCACTACGCAACTATCAATAAATATCGGAATAGCTATCCCCTTATGAGCTGGCACAGTCATCATAGGCTTCCGTAACAAAACAAAAATATCCCTAGCTCATCTTCTACCACAAGGCACACCTACTTTTCTTATCCCTATGCTAGTAATTATTGAAACCATTAGCCTATTTATTCAACCAATGGCACTAGCCGTACGACTAACCGCCAACATCACAGCAGGACACCTATTAATACATTTAATTGGAAAAACAACCCTCGCACTAATAAAC---ATTAGCCTATCCGTAGCCTTCATCACATTTATAATCCTCATCCTACTAACTATTCTTGAATTCGCTGTTGCTTTAATCCAAGCTTATGTCTTTACCCTCCTAGTGAGCCTATACCTGCATGACAATACA +>Macroscelides_proboscideus_NC_004026 +------------TAATGAACGAAAATTTATTTACCTCATTCATTACACCAA---CACTAGTAGGTCTCCCTATAACAGTCATTATTATTGCATTCCCAAGCATTTTATTCCCACAACCTA---AACGTTTGATTAATAACCGATGAACCACAATCCAACAATGAATAATCAACCTCATCCTAAAACAAATAATGTCAATGCATAATATTAAAGGACGAACTTGATCCCTAATACTAATTTCACTAATCTTATTCATCGGTTCAACAAATCTATTGGGTCTACTACCACATTCATTTACTCCTACCACTCAACTATCAATAAACTTAGGAATAGCAATCCCACTATGAGCCGGAGCTGTTATTATAGGTTTCCGAAATAAACCCAAAACCTCATTAGCACATTTTCTTCCACAAGGAACCCCTATTCCCCTAATTCCGATACTCATTATTATTGAGACTATCAGTTTATTTATTCAACCAATAGCCCTAGCAGTACGACTCACAGCAAATATCACCGCAGGACACCTGCTTATTCACCTAATCGGAGGAGCCACTTTAATCTTAATAT---CAATTAGCACCACCACAGCTACCATTACATTTATTATCCTAATTCTTTTAACAATCCTAGAATTCGCAGTAGCCTTAATTCAAGCATACGTATTCACACTTTTAGTTAGCCTCTACTTACACGACAATA +>Cercocebus_chrysogaster_NC_021943 +------------AATGAACGAAAATCTATTTACCCCATTCTCAACTCCAAT---AGTACTAGGTCAACCCGCTACGATCCCTATTATCTTATTCCCCATACTACTAATTCCAACCTCCAA---ACACCTTATTAACAACCGACTAACCACTATCCAACAAAACCTAACCCAATTCACCCTAAAACAAATAATAATTACCCATAACACCAAGGGACAAACTTGATCTCTAATACTAATATCTCTAATTATTTTCATCACCATAACTAACCTTCTAGGACTCCTACCCTACTCATTCACACCAACAACCCAACTTTCTATAAACCTAGCCATAGCAATCCCCCTATGAGCAGGCACAGTAATCACAGGACTGCGCCTCAAGACTAAAAATTCTCTAGCCCACCTTCTACCACAGGGCACACCCACACCACTTATTCCCATACTAGTAATGATCGAAACTATTAGCCTGCTTATTCAACCAGTAGCCCTAGCCGTACGACTAACCGCTAACATTACTGCTGGTCACCTACTAATACACCTGACTGGAAACGCTGCACTAGCACTATCAAC---CGTCAGCTCCTCTGCCACCCTCCTAACCTTTACACTCCTAATACTGCTAACCATTCTAGAAATTGCAGTTGCCCTAATTCAAGCCTACGTTTTTACACTCCTAACTAGCCTTTATTTACATAACAACAC +>Rhinolophus_macrotis_voucher_Gz_07_64_NC_026460 +------------ATGAACGAAAATCTATTCGCCTCTTTCATTACCCCAACG---ATAATGGGCCTTCCCATTGTTATCTTGATTATTATATTCCCCACAATTCTCTTCCCCTCAACAAAC---CGACTGATTAGTAACCGCCTCGTCGCCATCCAACAATGATTAATTCATATAACATCAAAACAAATAATGGCTATCCACAACCCTAAAGGCCAAACTTGAACCCTAATGCTTATATCTCTTATTCTATTCATCGGCTCAACAAACCTGTTAGGACTTCTCCCTCACTCCTTTACACCAACTACACAACTATCTATGAACCTGGGCATGGCTATCCCCCTATGGGCAGGAACTGTAATCCTGGGCTTCCGCCACAAAACAAAAGCTTCTCTAGCCCACTTCCTACCGCAAGGAACTCCCTTGCCCTTAATCCCCATACTAGTAATTATCGAGACCATCAGCCTGTTTATCCAACCTATAGCTCTAGCCGTACGGCTAACAGCCAACATTACTGCCGGACATCTCCTAATCCACCTAATTGGAGGCGCCACACTAGCTCTACTAAGT---ATCAGTACAGCCACCGCCTTCATCACATTCATCATCCTTGTGCTGCTGACAATCCTAGAATTCGCCGTCGCCCTAATCCAAGCCTATGTATTCACACTGCTGGTTAGCCTTTACCTACACGACAACACC +>Nycticebus_coucang_NC_002765 +------------TAATGGACCAAAACTTATTTGCCTCATTCATTACCCCTA---CAATAGCTGGCCTGCCCATTGTAATTTTTATTGTAATATTCCCATACATTATAATCTCAGCCCCTA---CACGATTAATTAGCAACCGAATAACCTCTATACAACAATGACTTATTCAGCTAATCTTAAAACAACTAATAGTGACTCACAATACAAAAGGACGAACTTGATCATTAATGCTTATCTCACTTATCATTTTTATCGGTTCAACTAATCTACTAGGTCTACTACCCCACACTTTTACACCAACAACCCAGCTTTCAATGAATCTCGCTATAGCTATCCCACTATGAGCAGCTACTGTAATTACAGGTTTCCGACACAAAACCAAAGCGTCCCTAGCACACTTCCTGCCCCAGGGAACCCCTCCCTTGCTAATCCCCATACTAGTCCTTATCGAAACCATTAGCCTCTTAATTCAACCTATAGCCCTAGCCGTGCGACTAACAGCTAACATCACAGCAGGACATCTCCTTATACACCTTATCGGAGGCGCTACACTAGCAATTTCAT---CAATTAGCTCAGTCGCGGCCTCAATCACATTTATCATCCTCATCCTACTATCAATCCTAGAGTTCGCAGTAGCTCTTATCCAAGCATACGTATTTACACTGCTAGTCAGCCTTTACCTACACGACAATA +>Propithecus_coquereli_NC_011053 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAAC---AATTGTAGGAATCCCTATTGTGATTCTAATCATTGCAATCCCTAGTATTCTATTCCCTTCACCCAC---CCGTCTTATTACCAGCCGATTGACTTCTTTACAGCAATGACTCATTCAACTAGTATTAAAACAACTAATAATGATACACAGCATTAAAGGACGAACCTGATCACTTATATTAATTTCACTAATCCTATTTATCGGATCAACCAACTTACTAGGTCTATTACCCCACTCATTCACCCCTACCACTCAACTATCAATGAACTTAGGCATGGCCATTCCACTATGAGCTGCCGCAGTCATTACAGGCTTTCGCCATAAAACAAAAATATCCTTGGCCCATCTACTACCACAAGGAACACCAGTTCCCCTTATCCCTATACTAGTAATTATTGAAACCATTAGCCTTTTCATTCAACCTATAGCATTGGCCGTACGATTGACAGCCAACATTACAGCAGGCCATCTACTCATACACTTAATTGGCGGAGCCACCTTAGTATTAACCTC---AATCAGTCCTGCCACTGCTTCAATTACATTTATTATTCTCATTCTCCTTACAATCCTTGAATTTGCCGTCGCCCTAATTCAAGCCTACGTTTTTACCCTACTAGTTAGCCTTTATCTACACGACAACAC +>Semnopithecus_entellus_NC_008215 +------------ATGAACGAAAATTTGTTTGCCCCTTTCACAGCTCCATCA---CTCCTAGGCCTGCCCGCTGTAATACCCATCATTCTATTTCCTACACTGTTAATTTCAACTTCTAAG---GGTCTTATCAATAACCGACTAGTTACTATTCAACAAAACCTGATTCAAGTGGTTCTAAAACAAATAATAATAACACAGAGTACCAAAGGACAAGCTTGATCTCTAATATTAATATCCCTATTTATTTTCATTGCCACGACTAATCTTCTCGGGCTTTTACCTCATTCATTCACGCCCACTGCTCAACTATCCATAAATCTAGCCATGGCAATTCCTTTATGAGCAGGCACAGTAATTACAGGTCTCCGCTTCAAAACCAAAAACTCCTTAGCCCACTTTCTACCACAAGGCACACCCACACCTCTTATTCCCATGCTAGTAATTATCGAAACTATCAGCTTGTTTATTCAACCAGTAGCCCTAGCTGTACGCCTAACCGCTAATATTACAGCAGGGCATCTACTCATACACCTAATCGGAAATGCCGCGCTAGCATTATCAATC---AACAATTTCTTTGCAAGCTCTTTAATTCTGGCACCCCTAATAGCACTAATAATTCTAGAAATCGCAGTTGCCCTAATTCAAGCCTACGTCTTCACACTACTGGTAAGCCTTTACCTACATGATAATACT +>Mustela_sibirica_voucher_YP6136_NC_020637 +------------TAATGAACGAAAATCTATTTTCCTCATTCACTACCCCTA---CAATAATAGGATTGCCTATCGTTATCCTCATCACCATATTCCCAGGTATTATATTCCCCTCACCCA---ACCGACTGATTAACAACCGACTCATTTCTATTCAACAATGATTGGTTCAATTAACATCAAAACAAATGCTGTCCATTCACAACCAAAAAGGACAAACTTGAGCATTAATACTAATATCCCTAATCCTATTTATTGGGTCTACTAACCTGCTAGGTCTCCTACCTCACTCATTTACCCCTACCACACAACTGTCCCTGAACCTAGGTATAGCCATCCCCCTATGAGCAGGCACAGTAATTACTGGATTCCGACACAAAACAAAAGCCTCTTTAGCCCACTTTCTACCACAAGGAACCCCATTACCTCTAATCCCCATGCTAATCATCATTGAAACCATCAGCCTATTCATTCAACCCATGGCCCTGGCCGTGCGACTAACAGCTAACATCACAGCGGGCCACCTATTAATTCACCTAATTGGAGGAGCCACCCTAGCCCTAATAA---GCATTAGTACTGTTACAGCAATTGTTACCTTTTCTATCCTTGTTTTATTAACTATCTTAGAATTCGCAGTAGCTCTTATTCAAGCTTACGTCTTTACCCTACTAGTAAGCCTATATTTACATGACAACA +>Tarsius_bancanus_NC_002811 +------------AATGAACGAAAACCTATTCGCCTCTTTCATTACCCCCAC---AATAATAGGCCTACCAGTAGTAATTCTTATTATTATATTTCCAACTATATTATTTCCTACCCCAAC---CCGCTTAATTAATAACCGATTTATTTCTCTCCAACAATGGCTAATTCAACTAGTACTTAAACAAATAATGACCATACATAATAATAAAGGCCGAACTTGATCCCTAATATTAGTCTCCCTAATCTTATTTATCGGGTCCACAAATTTACTAGGCCTATTACCCCACTCCTTCACGCCAACTACTCAACTATCAATAAACCTAGGAATAGCAATCCCCCTATGAGCAGGAGCAGTAATTACTGGCTTCCGCTATAAAACTAAAGCATCCTTAGCTCACTTTCTCCCACAAGGAACCCCAATCCTCCTAATCCCCATACTAATCATTATTGAAACTATTAGCCTTTTTATTCAACCAATAGCTCTAGCCGTACGACTAACCGCTAACATTACAGCAGGTCACTTACTCATACATCTAATTGGAGGTGCCACTCTAATCTTACTATC---AATTAATACCATCGCAGCATCAACAACATTTATTATTCTTACATTACTTACAATTCTAGAGCTAGCTGTAGCCCTCATTCAAGCTTATGTATTTACACTTCTAGTAAGCCTTTACCTACACGACAACAC +>Gazella_bennettii_isolate_AWWP_NC_020703 +------------ATGAACGAAAATCTATTTACCTCTTTCATTACCCCTATA---ATTCTAGGCCTTCCCCTCGTTACCCTAATTGTCTTATTCCCTAGCCTATTATTTCCAACATCAAAC---CGACTAATAAATAACCGCCTTATCTCTCTTCAACAATGAGTACTTCAACTTGTATCAAAGCAAATAATAAGCATCCACAACCCCAAAGGACAAACATGAGCACTTATACTGATATCCTTAATTCTATTTATTGGATCAACAAACTTACTAGGCCTACTACCTCACTCTTTTACACCAACTACACAACTATCAATAAATCTAGGTATAGCCATCCCCCTATGAGCAGGAGCTGTAATCACGGGCTTCCGCAACAAAACTAAAGCATCACTTGCCCATTTCTTACCACAAGGAACACCCACCCCTCTAATCCCTATACTAGTAATTATCGAAACTATTAGTCTATTTATTCAACCAATAGCCCTCGCAGTACGATTAACAGCCAATATTACAGCAGGACACCTATTAATTCACCTAATTGGAGGAGCTACATTGGCACTAATAAAT---ATTAGCACTACAACAGCTCTTATTACATTTATTATTTTAGTTTTACTAACAATTCTTGAATTCGCAGTAGCCATAATCCAAGCCTACGTATTTACTCTTTTAGTCAGCCTATATCTACACGATAACACA +>Pteronotus_parnellii_NC_023368 +------------TAATGAACGAAAATCTATTCGCTTCTTTCATTACCCCTA---CGATAATAGGACTCCCTATCGTCGTACTAGTTATTATATTCCCAACGATCCTATTCCCATCCACTA---ACCGCCTAATCAACAACCGTCTAGTAGCTATCCAACAGTGATTGATTCACCTTACCTCCAAACAAATACTATCCATTCATAATCGAAAAGGCCAAACATGAGCCCTAATATTAATATCATTAATCCTTTTCATTGGCTCAACCAACCTACTAGGACTTCTACCACACTCGTTCACCCCAACAACACAACTATCAATAAACCTCAGTATAGCTATCCCCCTCTGAGCAGGCACAGTAATTCTAGGTTTCCGCCATAAAACTAAAGCTTCCCTAGCACACTTTCTCCCACAAGGAACTCCTATCCCCCTTATCCCGATACTAGTAATCATTGAGACAATCAGTCTATTTATCCAACCAGTGGCCCTGGCCGTACGACTAACAGCCAATATCACAGCAGGCCACCTCTTAATCCATCTAATCGGAGGGGCTACCTTAGCCCTCATAG---ACATTAGCATGACTACTGCCTTCATCACATTCATTATCTTAATCCTACTAACCATCCTTGAATTCGCTGTAGCTCTAATTCAAGCCTACGTCTTCACCTTACTAGTAAGCCTATATCTACACGACAATG +>Ovis_ammon_isolate_h77_NC_020656 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTAT---AATATTTGGCCTCCCCCTCGTTACCCTCATTGTTTTATTCCCTAGCCTATTATTCCCCACATCAAA---TCGACTAGTCAGCAACCGCCTCATCTCCCTCCAACAGTGAATACTTCAATTAGTATCAAAACAAATAATGAGCATTCATAACACCAAAGGACAAACATGAACACTAATGCTAATCTCCCTAATTTTATTTATTGGATCCACAAACCTACTAGGCCTCCTACCCCACTCATTTACACCAACTACACAACTATCAATAAACCTAGGCATGGCCATTCCTTTATGAGCAGGAGCTGTAATTACAGGCCTCCGCAACAAAACTAAAGCTTCACTCGCCCATTTCCTACCACAAGGGACACCCACCCCACTGATCCCAATACTAGTAATTATTGAAACCATTAGCCTATTTATTCAACCAGTAGCCCTTGCCGTACGATTGACAGCTAACATCACGGCAGGACACTTACTAATTCACCTAATTGGAGGAGCCACCCTTGCACTAATAAG---CATTAATATCACAACAGCACTCATCACATTCATTATCCTAATTTTATTAACAATCCTCGAGTTCGCAGTGGCTATAATTCAAGCCTATGTATTTACCCTTCTAGTTAGCTTATACCTGCATGATAACAC +>Hyaena_hyaena_isolate_Cerza_NC_020669 +------------AATGAACGAAAATCTATTCTCCTCTTTCACTACCCCAAC---AATAATGGGCCTACCCATCGTTGTACTAATTATCATATTCCCAAGCATACTATTCCCCTCACCAAA---TCGATTGATTAGTAATCGCCTAGTCTCACTTCAACAATGACTAGTCCAACTAACAGCAAAACAAATACTGACCATCCACAGTCGTAAAGGACAGACATGAGCCCTAATACTAATATCTTTAATTATATTTATTGGCTCAACTAATCTACTCGGATTACTCCCACACTCATTCACACCCACAACACAACTCTCTATAAACCTAGGAATAGCCATCCCCCTGTGGGCAGCTACTGTGGTAGTTGGATTCCGACATAAGACAAAGGCATCCCTAGCTCACTTTCTACCCCAAGGAACACCTCTTCCCCTGATCCCTATGCTCGTAATTATTGAAACTATCAGCCTATTCATTCAACCTGTGGCCCTGGCCGTACGACTCACAGCCAACATTACTGCAGGCCACCTATTAATGCATCTGATCGGAGGAGCGGCCCTAGCCCTAATAAA---AATCAACACCTCCATTGCTCTCATTACCTTTGTCGTCCTTGTTCTATTGACAATCCTTGAATTCGCCGTGGCCCTAATTCAGGCCTATGTCTTTACCCTACTAGTAAGCCTATATCTACACGACAATAC +>Macaca_arctoides_NC_025201 +------------ATGAACGAAAACTTGTTTGCCCCTTTCTCAGCCCCAACA---ATCCTAAACCAACCCGCCACAATCCCCATTATCCTACTGCCCACCCTACTAGTCTTAACCTCAAAA---CACCCCATCAATAATCGACTAACCACCATTCAACAAAATCTAACTCAATTCACCCTAAAACAAATAATAAAGACTCACAACGCTAAAGGACAAACCTGGTCTTTAATACTAATATCCCTAATCACTTTTATTGCCATAACAAACCTCCTAGGACTTCTGCCTTACTCGTTCACGCCAACCACCCAACTTTCCATGAACCTAGCTATGGCAATCCCCTTATGAACAGGCACGGTAGTAGTAGGGCTTCGCTTTAAAACCAAAAATTCCCTAGCCCACCTCCTACCACAAGGCACACCCACACCTCTCATCCCCATACTGGTAGCAATCGAAACTATCAGCCTACTCATTCAACCAGTAGCTCTAGCCGTACGACTAACCGCAAACATCACAGCCGGCCATCTGCTAATTCACCTGTCCGGAAACGCCGTACTAGCACTATCAACC---ATCAACCCTTCCATAACTCTACTAATTTCCACACTTCTAGTACTACTAACTGTGCTAGAAATCGCAGTAGCCCTAATTCAAGCCTATGTCTTCACACTCTTAATTAGCCTCTATCTGCGCAACAACACC +>Eubalaena_australis_NC_006930 +------------TAATGAACGAAAATCTATTTGCCCCTTTCATAACCCCAG---TTATAGTAGGTATTCCTATCACCACCCTAATTATTATCCTCCCATCCATTTTATTCCCAACACCAA---ACCGACTAATCAACAACCGCACAATCTCCATCCAACAATGATTAACTAAACTAACATCAAAACAACTAATAAGTGCACACAGCCCTAAAGGACAAACCTGATCTCTAATACTTATTTCATTATTCCTATTTATTGCCTCCACCAATCTTCTTGGAATATTACCCCACTCATTCACACCCACCACACAACTCTCAATAAATGTAGGAATAGCCATCCCCCTATGGGCTGGCACTGTTTTTACTGGATTTCGCAACAAAACAAAAATATCCTTAGCACACCTACTACCACAAGGCACACCCACCTTTCTTATTCCTATGCTAGTAATTATCGAAACTATCAGCCTATTTATTCAACCAGTAGCACTGGCCGTACGACTAACTGCCAACATTACAGCAGGTCACCTACTAATACATTTAATTGGAGAAGCAACCCTTGCACTAATAA---ATATCAGCCTACTTACAACCCTTATCACCTTTATTATTCTCACTCTATTGACCATCCTTGAATTCGCTGTCGCCTTAATCCAAGCCTACGTATTCACCCTCCTAGTAAGCCTATACCTTCATGATAACA +>Plecotus_rafinesquii_NC_016872 +------------AATGAACGAAAATCTATTTGCCTCATTCATTACCCCTAC---GATAATAGGTCTACCTATTGTTGTTCTCATCATTATATTTCCCTCAATCCTTTTCCCATCAGCAAC---ACGACTGATCAACAACCGGCTAATTACAATACAACAGTGATTGATTCAGCTGACCACAAAACAGATAATGTCTATCCACACTAAAAAGGGCCAAACCTGAGCACTAATATTAACCTCATTAATTATATTTATTGGCTCCACAAACCTGCTAGGTCTTCTACCGCACTCATTCACCCCAACTACCCAGCTATCAACAAACCTTGGCATGGCAATCCCCCTTTGAGCGGGCACAGTAATCCTGGGCTTTCGTTATAAGACAAAAGCATCATTAGCACATTTCCTACCTCAAGGCACACCACTACCTCTAATCCCCATACTCATCATTATCGAAACAATTAGCCTTCTTATTCAACCCATAGCACTAGCAGTACGACTCACAGCAAACATTACTGCAGGACACTTATTAATTCATCTCATTGGGGGAGCAACCCTGGCTTTAATGGA---TATTAGCATAACCACTGCCTCTATTACATTTATTATTCTTGTACTACTAACAGTGCTAGAGTTCGCTGTAGCCCTAATTCAAGCATACGTGTTTACCTTACTAGTCAGCCTCTACTTACACGATAATAC +>Lutra_lutra_NC_011358 +------------ATGAACGAAAATCTATTTTCCTCTTTTATTACCCCTGTA---ATAATAGGACTTCCTATTGTTATCGTTATCGTGATATTTCCGAGTATCATGTTTCCCTCACCTAAT---CGACTAATCAACAACCGACTCATCTCCATTCAACAATGATTAGTACAACTGACATCGAAACAAATGCTAGCCATCCACAACCAAAAAGGACAAACCTGAGCATTAATGCTAATATCTCTTATTCTGTTCATTGGTTCTACCAACCTATTAGGCCTCCTACCCCACTCATTTACTCCCACTACTCAACTATCCCTAAACCTGGGGATGGCCATCCCCTTATGAGCAGGTACAGTGATCACTGGTTTCCGGTATAAAACAAAAGCCTCCCTAGCCCACTTCTTACCACAAGGGACACCCCTCCCCCTAATCCCCATACTTATTATCATCGAAACTATTAGCCTATTTATCCAACCCATAGCCCTAGCCGTACGACTAACAGCCAACATTACCGCAGGTCACCTATTAATTCACCTAATCGGAGGAGCTACCCTGGCTTTAATAAAC---ATTAATGCCGCCACGGCAATAGTAACTTTTATAATCCTTATCCTTCTAACCATCCTAGAATTTGCAGTAGCCCTTATCCAAGCCTATGTTTTCACCCTACTGGTAAGCCTATACCTACACGATAATACC +>Apodemus_chevrieri_NC_017599 +------------TAATGAACGAAAATCTATTTGCCTCTTTTATCATTCCCT---CAGTAATAGGACTTCCAATTGTAATTACCATTATTATATTTCCATCTATTTTATTTCCATCATCAG---AACGCTTAATTAGTAATCGACTTCACTCATTTCAACACTGACTAATTAAACTTATTATCAAACAAATAATACTCATTCACACACCGAAAGGACGAACTTGAACTTTAATAATTGTTTCTCTGATTATATTTATTGGCTCAACTCACCTCCTAGGCCTCCTCCCACACACATTCACACCAACTACCCAACTATCAATAAATCTTAGCATAGCAATTCCACTATGAGCAGGAGCAGTCCTATTGGGATTTCGCCATAAATTAAAAACCTCCCTAGCCCACTTTCTCCCACAAGGCACCCCAATTTCACTTATCCCTATACTAATTATCATCGAAACAATTAGTCTATTTATTCAACCTATAGCCCTAGCAGTATGATTAACAGCTAACATTACTGCAGGACACCTACTTATGCACCTAATTGGAGGAGCAACCCTAGTCCTTATAA---ATATTAGCCCACCAACCGCTACTATTACATTCATCATCCTACTTCTCCTCACAGTACTAGAATTTGCTGTAGCCCTAATTCAAGCATACGTATTTACCCTACTAGTAAGCCTATATTTACATGATAACA +>Cuon_alpinus_NC_013445 +------------AATGAACGAAAATTTATTCGCCTCTTTCGCTGCCCCCTC---AATAATGGGTCTTCCTATTGCGATGTTGATCGTTATATTCCCTTCCATTCTATTTCCATCACCTAA---CCGCCTAATCAACAACCGGTTAATCTCTATTCAACAATGACTAATTCAATTGACATCAAAACAAATACTGGCTATTCATAACCAAAAGGGACGGACTTGAGCCCTTATACTGATGTCACTAATTCTATTTATTGGTTCAACTAATCTACTCGGACTACTACCCCACTCATTTACGCCCACAACACAACTCTCTATAAATCTTGGAATAGCTATTCCCCTATGAGCAGGGACAGTAATTACTGGTTTTCGCTATAAAACCAAGGCATCCTTGGCACATTTCCTACCTCAAGGCACTCCTCTTCCTCTAATTCCAATATTAGTAATCATCGAAACTATTAGTCTATTTATTCAACCTATAGCTCTAGCCGTTCGATTAACTGCCAATATTACTGCAGGACACCTCTTGATCCACTTGATTGGAGGGGCCACCTTAGCCCTTATTAG---TATTAGCACTACCACAGCTTTTGTTACTTTCATCATTCTAATCCTACTTACGATCCTAGAGTTTGCTGTTGCTTTAATTCAAGCCTATGTTTTTACCTTGCTAGTAAGTCTGTATTTACACGACAACAC +>Ochotona_princeps_NC_005358 +------------ATGAACGAAAATTTATTCTCCTCTTTCATTACCCCCTCA---ATTATAGGTTTACCCATCGTAATCCTCATTATTATATTTCCAATTATCCTATTCCCCACCCCTACA---CGCCTTATTAACAACCGACTCATTGCAATCCAACAATGACTAGTCCAACTCATTCTAAAACAAATAATACTAATCCATAACCCAAAAGGCCGAACCTGGTCACTAATATTAATCTCCCTGATCATATTCATCGGCTCAACCAACCTCCTAGGCCTCCTCCCACACTCCTTCACCCCAACCACACAATTATCTATAAACCTTGGTATAGCAATCCCTCTTTGAGCCGGGGCAGTCATCACAGGCTTCCGCTACAAAACCAAAGCTTCATTAGCACACTTTCTCCCCCAAGGAACTCCCCTCCCACTTATTCCTATACTCGTAATCATCGAGACAATTAGCCTGTTTATCCAACCCATAGCCCTCGCCGTACGACTTACCGCTAATATCACTGCAGGGCACCTCCTGATACACTTAATCGGTGGCGCCACACTAGCCCTGACCTCC---ATCAGCCCTGCAACCGCCACAATCACATTCATCATCCTCCTATTACTAACCGGCTTAGAATTTGCCGTCGCATTAATTCAAGCTTATGTCTTTACACTTCTAGTAAGCCTCTACTTACATGATAATACT +>Orcinus_orca_isolate_ENAHN1_NC_023889 +------------TATGAACAAAAATCTATTTACCTCTTTCATAATCCCAGT---TGTACTAGGTATTCCTATCACTACTCTAATTATTATATTTCCCACCATACTATTCCCGACACCCAA---TCGATTAACCAATAACCGTGTAATCACCATCCAACAATGACTTACCAAACTCACATCAAAACAACTGATAATTACACATGGCCTCAAAGGACAAACCTGATCTCTAATACTCACCTCACTTTTCCTTTTCATCGCTTCCACAAACCTTCTTGGAATGTTACCTCACTCATTCACACCTACTACTCAACTCTCTATAAACTTAGGCATGGCTATTCCACTATGAGCTGGCACCATCTTTATCGGCTTCCGTAATAAGACAAAAATATCCCTAGCCCACCTTTTACCATTAGGCACACCCGCTTTCCTAATTCCCATGCTAGTAATAATCGAAACTATTAGCCTATTTATTCAACCCTTAGCTTTAGCAGTACGACTAACAGCAAACATCACAGCAAGTCACCTATTACTACACCTAATTGGAAGTGCAACTCTTGCATTAATAGG---CATTAATCTACCCACAGCCCTCATCACATTTATCATCCTCACTCTATTAGTCATCCTCGAATTCGCTGTAGCCCTGATCCAAGCCTACGTATTTACATTACTAGTAAGCCTATACTTGCAAGACAATAC +>Cephalophus_adersi_isolate_SUN_NC_020685 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTATA---ATACTAGGCCTACCCCTCGTCACCCTTATTGTCTTATTCCCCAGTCTACTATTTCCAACATCAAAT---CGACTGGTTAATAATCGCCTCATTTCCCTCCAACAATGACTGCTCCAACTCATCTCAAAACAAATAATAAGCATTCATAACCCCAAAGGACAAACATGAGCACTAATACTAATATCCTTAATTTTATTTATTGGTTCAACAAATCTATTAGGCCTACTACCCCACTCATTTACGCCAACCACACAACTATCAATAAACTTAGGTATAGCCATTCCCCTATGAGCAGGGGCTGTTATTACAGGCTTCCGTAATAAAACCAAAGCATCACTCGCCCACTTTCTGCCACAAGGAACACCAACCCCATTAATTCCAATACTAGTAATTATTGAAACTATTAGCCTCTTTATCCAACCAGTAGCCCTTGCCGTACGACTAACAGCTAATATCACAGCAGGGCACCTATTAATCCATTTAATCGGAGGAGCTACACTTGCACTAATAAAT---ATTAGCACCACAACAGCTCTTATTACATTCATTATTTTAGTCCTATTAACTATTCTCGAATTCGCAGTAGCCATAATTCAAGCCTATGTATTTACCCTCTTAGTCAGCCTATATCTACACGACAACACA +>Martes_pennanti_isolate_MP41_NC_020664 +------------TAATGAACGAAAATTTATTCTCCTCTTTCACTACCCCTA---CAATAATAGGACTTCCTATCATTATCGCCATCACCATATTCCCAGGTATTATGTTTCCCTCACCAA---ATCGGCTAATTAACAATCGACTCATCTCCATCCAACAATGGTTAGTACAATTAACATCAAAACAAATATTGTCTATTCACAACCAAAAAGGACAAACCTGGGCGCTAATGCTAATATCCCTAATCCTATTTATCGGCTCCACTAACCTTCTAGGCCTCCTACCCCATTCATTCACCCCCACTACACAACTATCCCTAAATTTAGGCATAGCTATCCCCTTATGAGCAGGTACAGTAATCACTGGTTTCCGATACAAAACAAAGGCCTCCTTAGCTCACTTTTTACCACAAGGAACACCCCTCCCCCTAATCCCCATACTCGTAATTATCGAAACCATTAGCTTATTTATCCAACCAATAGCCCTAGCCGTACGATTAACAGCCAACATCACCGCAGGTCACCTATTAATCCATCTAATCGGAGGGGCCACCCTAGCCCTGATAA---GTATTAGTACTATCACAGCTGCAGTAACCTTTATCATTCTCATCCTCCTAACTATCCTAGAATTTGCAGTAGCCCTTATTCAAGCCTACGTCTTTACCTTATTAGTAAGCTTATATTTACATGATAACA +>Hexaprotodon_liberiensis_isolate_CYTO_NC_020697 +------------AATGAACGAAAATCTATTCACCTCTTTCATTACCCCTAC---AATACTAGGCCTACCCCTAGCCGCCATAATCATTATATTTCCAAGCATACTATTCCCAGCACCTAC---CCGTCTAATTACTAACCGCTTAATCTCCATTCAACAATGACTAATCCAACTCGTATCAAAACAAATAATGAACATCCACAACCACAAAGGACAAACTTGAACACTAATGTTAATATCCCTTATCCTATTCATCGGCTCAACAAATCTCTTAGGACTTCTCCCACACTCATTCACACCCACCACACAACTCTCAATGAACTTAGGCATAGCCATCCCCTTATGGGCAGGCACCGTAATCATAGGCTTCCGTAACAAAACAAAAATCTCTTTGGCCCACTTTCTACCCCAAGGAACACCCACACCCCTAATCCCCATACTGGTAATCATTGAGACAATTAGCCTATTTATTCAACCAATAGCACTAGCCGTGCGACTAACAGCAAACATCACAGCAGGACACCTACTAATGCACTTAATCGGAGGGGCAACCCTCGCATTAATAAA---CATCAGTATAGCCACTGCCCTTGTCACATTCATCATCCTAGTCCTGCTGACAGCCCTAGAATTTGCCGTTGCCATAATTCAGGCGTACGTCTTCACCCTACTAGTAAGTCTCTACTTACACGATAACAC +>Urotrichus_talpoides_NC_005034 +------------ATGAACGAAAATCTATTCGCCTCTTTCATTACCCCTACA---ATAATAGGATTACCTATTGTCATTCTAATCATCATGTTCCCAACTATTTTATTTCCTGAGCCAAAT---CGACTAATTAATAATCGACTAATCTCAATACAACAATGACTCATTCAACTAACTTCAAAACAAATAATATCAATTCACAACTCTAAAGGTCAAACCTGGACTCTAATATTAATATCTCTCATTCTATTCATCGGATCTACTAATCTCCTAGGTTTACTTCCACACTCATTTACCCCAACCACTCAACTATCAATGAACCTAGGCATAGCCATTCCACTATGAGCAGGCACAGTTATCACTGGATTTCGACATAAAACGAAAGCATCGCTAGCACATTTCTTACCACAAGGAACCCCTATTCCACTAATTCCTATATTAATTATCATCGAAACTATTAGTCTATTTATTCAACCCATAGCCCTAGCCGTTCGACTCACCGCAAACATTACCGCAGGGCATTTACTAATTCACCTAATTGGAGGTGCCACTTTAGCTCTAATAAAT---ATTAGTGTGGCTACAGCTATAGTCACCTTCATTATTTTAGTGCTACTAACTATTCTGGAATTCGCCGTAGCACTTATTCAAGCATACGTATTTACCCTATTAGTTAGCCTATACCTACATGACAACACC +>Ochotona_curzoniae_NC_011029 +------------TAATGAACGAAAATTTATTCTCCTCTTTCATTACCCCCT---CAACCATAGGATTGCCCGTTGTAATTATTATTATTATATTCCCAATTATTCTATTTCCTACCCCCA---CCCGCCTTATCAACAACCGCCTCATCGCCATTCAACAATGACTAGTCCAACTTATTTTAAAACAAATAATACTAATTCATAACCCTAAGGGTCGAACCTGATCCCTTATACTAATCTCTCTAATTATATTTATTGGCTCAACTAACCTCCTAGGCCTCCTCCCACACTCTTTCACCCCAACTACACAACTATCCATAAATCTCGGCATAGCCGTCCCCCTATGAGCTGGTGCAGTTATTATGGGCTTCCGTTATAAAACCAAAGCCTCACTAGCACATTTTCTACCCCAAGGAACTCCCCTTCCACTCATCCCTATACTCGTAATTATCGAAACGATTAGCCTGTTTATTCAACCCATAGCCCTCGCTGTACGACTCACTGCCAACATCACTGCAGGCCACCTCCTTATGCACCTAATCGGCGGTGCTACACTAGCCCTTACTT---CTATTAGCCCCGCAACCGCCACAATTACATTCATCATCCTTCTCCTACTAACCGGCTTAGAATTCGCTGTAGCACTAATCCAAGCCTATGTCTTCACGCTTCTCGTAAGCCTCTACTTACATGACAATA +>Puma_concolor_NC_016470 +------------ATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCAACA---ATAATAGGACTGCCTATCGTTATCTTAATTGTTATATTCCCAAGCATTCTATTCCCATCACCCAAC---CGACTAATTAATAACCGCCTGATCTCACTGCAACAATGACTAGTACAATTAACATCGAAGCAAATATTGGCCATCCACAATCACAAAGGACAAACCTGAGCCCTAATACTGATATCCCTCATCTTATTTATTGGATCAACAAACCTATTAGGCTTACTACCTCACTCATTCACCCCAACCACCCAATTATCAATAAACTTAGGAATAGCTATTCCACTATGAGCCGGCACTGTAATTACCGGGTTTCGCCATAAAACTAAAGCATCCCTAGCCCACTTTTTACCACAAGGAACACCTATTCCCCTAATCCCCATGCTCGTAATTATCGAAACTATTAGCCTCTTCATTCAACCTATGGCCCTAGCCGTACGACTTACAGCTAACATCACTGCAGGTCACTTACTAATACACTTAATTGGAGGGGCCACTTTAGCCTTAATAAAC---ATTACAACTTCCGTTGCCTTAATTACTTTTATTATTCTTATCCTACTAACAATCCTTGAATTCGCTGTAGCCCTAATCCAAGCCTACGTTTTCACCCTACTAGTAAGCCTATATCTACATGATAATACC +>Arctocephalus_forsteri_NC_004023 +------------TAATGAACGAAAATCTATTTACCTCTTTCGCTTCCCCTA---CAATAATAGGCCTTCCCATCGTAACTCTAATTATCCTATTTCCAAGTATGTTATTCCCTTCACCAG---GCCGACTGATTAACAACCGCTTCACCTCTATTCAACAGTGACTAATCCAATTAACATCAAAACAAATAATATTAATCCATAATCACAAAGGACAAACATGGACATTAATACTTATATCACTCATTATGTTTATTGGATCTACCAATCTACTGGGTCTATTACCACACTCATTCACCCCCACTACCCAACTGTCTATAAACCTAGGAATAGCCATCCCCCTGTGAGCGGGAACGGTCGCCATGGGACTACGACACAAAACCAAAGCATCCTTGGCCCACTTCCTACCCCAAGGAACACCCTCCCCTCTTATCCCGATATTAGTAATTATTGAGTCTATTAGCTTACTTATTCAACCCATAGCCTTAGCCGTACGACTAACAGCCAACATCACTGCAGGTCACTTATTAATCCACCTAATCGGTGGGGCCACCCTAGCCCTCACTA---ACATCAGTATAATTACGGCCCTTATCACTTTCATTATCCTCATCCTGCTCACAATTCTTGAGTTCGCTGTAGCCTTAATCCAAGCCTACGTCTTCACTTTACTGGTAAGCCTATACTTACATGATAACA +>Ochotona_collaris_NC_003033 +------------AATGAACGAAAATTTATTCTCCTCTTTCATTACCCCATC---AATTATAGGATTACCCATCGTAATTATTATCATTATATTCCCAATCATCCTATTCCCCACCCCCAC---ACGCCTTATTAACAACCGACTCATTACAATTCAACAATGATTAGTTCAACTCATTCTAAAACAAATAATACTGATTCATAACCCAAAAGGCCGAACCTGATCCCTGATACTAATTTCTCTAATTATATTCATTGGCTCTACCAACCTCCTAGGCCTCCTACCACACTCCTTCACCCCGACCACACAATTATCTATAAACCTCGGTATAGCAATCCCCCTCTGAGCTGGGGCAGTTATCACAGGCTTTCGTTATAAGACCAAAGCCTCACTGGCTCACTTTCTCCCTCAAGGAACCCCTCTCCCACTTATCCCCATGCTTGTAATCATCGAGACAATCAGTCTGTTCATTCAACCCATAGCCCTCGCCGTGCGACTTACCGCCAACATCACTGCAGGCCACCTTCTAATACACTTAATCGGCGGCGCCACACTAGCCCTGACCTC---CATCAGCCCTCCAACCGCCACAATCACATTTATTATCCTCCTGTTGCTAACCGGCTTAGAATTTGCCGTCGCATTGATTCAAGCTTATGTCTTTACACTTCTAGTAAGCCTCTACTTACACGATAATAC +>Rucervus_eldi_NC_014701 +------------ATGAACGAAAATTTATTTGCCTCTTTCATTACCCCAATA---ATCCTAGGCCTTCCACTCGCTACCCTCATCGTTATGTTCCCTAGCCTATTATTTCCAACATCAAAT---CGTCTAGTAAATAATCGTCTTATTTCCCTCCAACAATGGACACTTCAACTTGTATCAAAACAAATAATAGGAATTCACAATACCAAGGGGCAAACATGAACACTAATACTCATGTCTCTGATCTTATTTATTGGATCCACAAATCTCCTAGGCTTGCTACCCCACTCATTTACACCAACCACACAATTATCAATAAATCTAGGCATAGCCATTCCTCTGTGAGCAGGAACTGTAATTACAGGCTTCCGCAATAAAACTAAAGCATCACTTGCTCACTTTCTCCCGCAAGGAACCCCAACCCCATTAATTCCCATGCTAGTCATCATCGAAACTATTAGTCTTTTTATCCAACCAATCGCCTTAGCCGTACGACTAACAGCTAATATCACTGCAGGACACCTACTAATTCACCTTATCGGAGGGGCTACACTTGCATTAATGAAT---ATCAGTACTACAATAGCTCTTGTCACATTTACTATTCTAGTTCTACTCACAATCCTCGAATTTGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTTCTAGTTAGCCTTTACTTGCATGACAACACA +>Aotus_nancymaae_NC_018116 +------------TAATGAACCAAAATTTATTTACCTCTTTCAACGTACCAG---TAATTTTAGGAATCCCCTTAGTAGTATTAATTATTTTATTTCCTACCACACTAATTATGCCCTCCA---ACAAGCTAATCAACAATCGACTCTCTTCTCTTCAACAATGGTTGGTTCAACTTACACTAAAACAAATAATAATAGTCCATACCAATAAAGGACGAACATGATCCCTTATACTCTTAGCCCTAATCTCCTTCATTGCTCTAAATAACCTCCTTGGACTCACACCCTATGCATTTACACCCACTACTCAGCTATCAATGAATCTAGGCATAGCAATTCCCCTATGAGCGGCAACCGTATTTATAGGGCTTCGATTCAAAACAAAGGCATCCCTTGCCCACTTCCTGCCCCAAGGAACCCCTGTCCCACTTATCCCAATACTAATTATTATTGAAACAATTAGCCTGTTTATCCAACCAATAGCACTAGCCGTACGATTAACAGCCAATATTACAGCGGGCCACCTACTAATACACCTGCTAGGGGACACTGCACTAACCCTTATAT---CAATTTATATATCCTCTTCTACAATCACTATTATTATCATCATTTTACTAATTACTCTAGAATTAGGTGTAGCTCTAATTCAAGCTTACGTCTTTACTCTTCTAGTAAGTCTTTACTTACACGATAACT +>Mazama_nemorivaga_isolate_MRGMa36_NC_024812 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTGCCCCAGT---AATATTAGGTATCCCACTCGCTACTTTTATCATCATTTTTCCTAGTTTACTATTTCCCACATCAAA---CCGTCTAATTAATAACCGTTTTATTTCTCTCCAACAATGAATACTTCAACTTGTATCAAAACAAATATTAGGAAACCATAATGCCAAAGGACAAACATGAGCATTAATACTAATTGCCCTAATTATATTTATTGGGTCAACAAACCTATTAGGTCTCCTACCTCACTCATTTACACCAACAACACAACTATCAATAAACCTAGGTATAGCCATCCCTCTATGAGCAGGAACCGTAATTATAGGCTTCCGAAATAAAACCAAAGCATCACTCGCCCATTTTTTACCACAAGGGACACCCACTCCACTAATCCCTATGTTAATTATTATTGAAACTATTAGCCTTTTTATTCAGCCAGTTGCCTTAGCTGTACGATTAACAGCCAACATTACCGCAGGACACTTACTAATTCACCTAATTGGAGGAGCCACACTTACATTAATAAG---TATTAGCACTACAATAGCCCTTATTACATTTATTATTTTAGTCCTTCTTACAATTCTCGAATTCGCAGTAGCTATAATCCAAGCCTACGTATTTACTCTCTTAGTAAGCCTCTATCTGCATGACAACAC +>Alouatta_caraya_NC_021938 +------------ATGAACCAAAATTTATTTGCCTCCTTCAATGTACCAATA---ATACTAGGAATCCCCCTAGTTACACTAATCATTCTATTTCCCACCATGCTAATTTCATCCCCTAAT---AAACTAATCAACAATCGACTCTCCTCTCTTCAACAATGACTAATCCAACTTACACTAAAACAAATAATAACAGTCCATAGTACTAAAGGACGAACTTGATCCCTTATGCTCATAGCCCTAATCATTTTCATCGCCCTAAACAATCTCCTCGGAATAACACCCTACGCATTCACACCAACCACCCAGCTATCAATAAACTTAGCTATAGCAATCTCCCTATGAGCAGCCACCGTACTAACAGGACTTCGATTTAAAACAAAAGCATCTCTCGCCCATTTTTTACCCCAAGGAACACCCATACCACTTATCCCTATACTAGTCGTCATTGAAACAATCAGCCTTTTCATCCAACCAATTGCACTAGCCGTACGACTAACAGCCAATATTACAGCAGGTCACCTGCTAATACATTTACTTGGGGACACCACACTAACCCTTCTATCC---TCCTACACCTCCTCTTCCATAATTACAATTGTTATCATTATCTTACTTATTATACTAGAACTAGGTGTAGCCCTAATCCAAGCCTATGTTTTTACACTCTTAGTAAGTCTCTACCTACACGATAACTCA +>Tragelaphus_strepsiceros_isolate_PHC11_NC_020752 +------------TAATGAACGAAAACCTATTTACCTCTTTCATTACCCCAA---TAATTTTAGGCCTCCCTCTTGTAACTCTTATCGTCTTATTTCCTAGCCTACTGTTTCCAACATCAA---CTCGACTAGTAAATAACCGCCTCGTATCCCTCCAACAATGAGCAATCCAACTTGTATCAAAACAAATAATAGCTATCCACAATACTAAGGGACAAACATGAGCGCTAATATTAATATCTCTAATTATATTTATCGGATCAACAAATCTACTAGGTCTCCTACCTCACTCATTTACACCAACCACACAATTATCAATAAACCTAGGTATAGCCATTCCCCTGTGAGCAGGGGCTGTCATCACAGGGTTTCGCAACAAAACCAAAGCATCACTCGCTCATTTCTTACCACAAGGCACACCAACCCCGCTAATCCCAATACTAGTCATCATCGAAACTATCAGCCTTTTTATTCAACCAATAGCCCTTGCCGTACGACTAACAGCTAACATCACTGCAGGTCACCTACTGATTCACCTGATTGGAGGAGCTACGCTCGCACTAATAA---ACATTAGCACCATGATAGCTTTCATCACATTCACTGTCCTAATCCTACTAACGATCCTAGAATTCGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTCTTAGTTAGCCTATACTTACACGACAATA +>Propithecus_edwardsi_isolate_TOL21_NC_026096 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAAC---AATTGTAGGAATCCCTATTGTGATCCTAATCATCGCAATCCCTAGCATTCTCTTCCCTTCACCCAC---CCGTCTCATTTCCAACCGATTGACTTCCTTACAACAATGACTTATTCAACTAGTACTAAAACAACTAATAATGATACACAGCATTAAAGGACGAACTTGGTCCCTTATATTAATTTCACTAATCCTATTTATTGGATCAACCAACTTACTAGGTTTATTACCCCACTCATTCACCCCTACTACTCAACTATCAATGAATCTAGGCATAGCCATCCCACTATGAGCTGCTGCAGTCATTACAGGCTTTCGTCATAAAACAAAAATATCCTTAGCTCACCTACTACCACAAGGAACGCCAGTCCCTCTTATCCCCATACTAGTAATCATCGAAACCATTAGCCTTTTCATTCAACCTATAGCATTAGCCGTACGATTGACAGCTAACATTACAGCAGGTCACCTACTCATACACTTAATTGGTGGAGCCACCTTAGTATTAACCTC---AATTAGTCCCACCACTGCCTCAATTACATTTACTATTCTTATTCTCCTTACAATCCTTGAATTCGCCGTCGCCCTAATCCAAGCCTATGTATTTACTTTACTAGTTAGCCTTTATTTACATGACAACAC +>Leontopithecus_rosalia_NC_021952 +------------ATGAACCAAAATTTATTTGCCTCATTCAATATTCCAACA---ATACTAGGAGTACCCTTAGTATTTTTAATTATTGCACTCCCCACTACATTAATTTTATCTTCCAAA---AACTTATTCAACAACCGACTCTCTTCAATTCAACAATGGCTAATTCAACTAACACTTAAACAAATAATATTAACTCACACCACTAAAGGGCGAACCTGATCCCTTATACTCCTAGCCCTAATTTCTTTTATTGCCCTAAATAATATTCTCGGACTTACACCATATGCATTTACACCAACCACCCAACTGTCAATAAATCTAGGCATAGCTATTCCTCTATGAGCAGCAACTGTACTAATAGGTCTCCGATTTAAAACAAAATCATCCCTCGCTCATTTTTTACCACAAGGAACACCAATTCCACTAATCCCTATATTAATTATTATTGAAACAATCAGCCTATTCATTCAACCTGTAGCCTTAGCCGTACGATTAACAGCCAATATCACAGCAGGCCACCTATTAATGCATTTACTTGGGGACACAACACTAACTCTTCTATCA---ATTTATCTTTCCACTTCCACAATCACTATTATTATTATTATTTTATTGATTACCCTAGAGTTGGGTGTAGCCTTAATTCAAGCCTATGTATTTACCCTCTTAGTGAGCCTGTACTTACATGACAACTCA +>Sus_verrucosus_NC_023536 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTGCCCCTA---CGATAATAGGACTACCCATTGTCACCTTAATCATTATATTCCCAAGCTTACTATTCCCAACACCCA---AACGACTCATTAATAACCGCACAATCTCAATCCAACAATGATTAATCCAACTAACATCCAAACAAATAATAGCTATTCACAACCAAAAAGGCCAAACCTGATCACTAATACTCATATCTCTAATTATATTTATCGGCTCAACAAACATCCTAGGCCTACTACCACACTCATTCACACCCACCACACAACTATCAATAAACCTAGGTATAGCAATCCCCCTATGATCAGCAACTGTATTCACAGGATTCCGCCATAAAACCAAAGCATCACTAGCCCACTTTCTACCACAAGGAACACCCGCCCCATTAATTCCTATGCTCGTAATCATTGAAACTATTAGCCTATTTATTCAACCAGTAGCCCTAGCCGTACGACTGACAGCCAACATTACAGCAGGACACCTATTAATTCATCTAATTGGAGGGGCCACATTAGCACTACTCA---ACATCAGCACTATAACAGCACTTATCACATTTATTATCCTCATTCTACTAACTATTCTCGAATTTGCAGTAGCTATGATCCAAGCTTATGTATTTACACTGCTAGTAAGCTTATACCTACACGACAATA +>Niviventer_excelsior_NC_019617 +------------AATGAACGAAAATCTATTCGCCTCTTTCATTACCCCAAC---AATAATAGGACTGCCAATTGTTATAGCCATTATCATATTTCCATCCATTCTATTCCCATCATCGGA---ACGCCTAATTAATAACCGCCTCCACTCATTTCAACATTGACTAATTAAACTTATTATTAAACAAATAATATTAATTCATACACCAAAAGGACGAACTTGAGCCCTAATAATTGTTTCCTTAATTATATTTATTGGCTCAACAAACCTATTAGGCCTTCTCCCCCACACATTCACTCCAACCACCCAACTATCTATAAACCTAAGCATAGCTATTCCACTGTGAGCTGGGGCCGTAATCTTAGGATTCCGACATAAACTAAAAAACTCTTTAGCCCATTTCCTCCCACAAGGAACACCCATCTCACTTATTCCTATACTAATCATTATCGAAACCATCAGTCTATTTATTCAACCAATAGCATTAGCAGTACGACTAACAGCTAACATCACTGCAGGACATCTACTAATGCACCTAATCGGAGGCGCCACCCTAGTACTTATAGA---TATTAGCCCACCAACTGCCACTATTACATTTATTATTCTACTCCTACTTACAGTACTTGAATTTGCTGTAGCCCTAATTCAAGCATACGTCTTTACACTCCTAGTAAGCCTATATTTACATGATAATAC +>Meles_anakuma_NC_009677 +------------ATGAACGAAAATCTATTTTCCTCTTTCATTACCCCAACA---ATAATAGGACTCCCTATTGTTATTATTATCATTATATTCCCAAGCATTTTATTCCCCTCACCAAAC---CGCCTAATCAATAACCGACTAATCTCCATCCAACAGTGATTAGTACAACTAACATCTAAGCAAATACTGTCTATCCACAACCAAAAAGGTCAAACTTGAGCACTAATATTAATATCCTTAATCTTGTTTATTGGTTCTACCAACTTACTAGGCTTATTACCTCACTCATTTACCCCTACTACGCAATTGTCCCTAAACCTAGGTATAGCTATTCCCCTATGGGCAGGAACAGTAATTGTTGGCTTCCGACATAAAACAAAGGCATCCTTAGCCCACTTCCTACCACAAGGAACACCACTTCTTCTAATTCCTATACTTGTTATCATTGAAACTATTAGCTTGTTCATCCAACCAATAGCCCTAGCCGTACGATTAACAGCAAATATTACTGCAGGCCACCTATTAATCCATCTAATTGGAAGCGCCACCTTAGCCCTAATAAAT---ATTAGCACTACCACAGCCATAGTGACCTTTATTATTCTTATTCTTCTAACTATCCTAGAATTCGCAGTAGCCCTTATCCAAGCTTACGTCTTCACCTTACTAGTAAGCCTGTATCTACATGACAACACT +>Antilope_cervicapra_NC_012098 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTGCCCCTA---TAATTCTAGGCCTTCCCCTCGTTACCCTTATCGTCTTGTTTCCCAGCCTATTATTTCCAACATCAA---ACCGACTAGTAAACAACCGTCTTATCTCTCTTCAACAATGAGTGCTTCAACTTGTATCTAAACAAATAATGAGCATTCATAACCCTAAAGGACAAACATGAGCACTAATACTAATATCCCTAATTCTATTTATTGGATCAACAAACTTACTAGGCCTACTACCTCACTCTTTTACACCAACCACACAACTATCAATAAACCTAGGCATAGCTATCCCCTTATGAGCAGGAGCTGTAATCACGGGCTTCCGCAACAAAACCAAAGCATCACTTGCCCACTTTCTACCACAAGGAACACCCACTCCTTTGATCCCTATACTAGTAATCATCGAAACTATCAGCCTATTTATTCAACCAGTAGCCCTCGCAGTACGATTAACAGCCAACATTACAGCAGGACACCTATTAATTCACCTAATTGGAGGAGCCACACTGGCACTAATAA---ACATTAGCACCACAACAGCTCTTATTACATTCATCATTTTAATCCTACTAACAATCCTTGAATTCGCGGTAGCCATAATTCAAGCTTATGTATTTACTCTTCTAGTTAGCCTATATTTACACGATAATA +>Peponocephala_electra_NC_019589 +------------AATGAACGAAAATCTATTTGCCTCTTTCATAGTCCCAAT---CACACTAGGCATTCCTATTACCACTCTAATTATTATATTCCCCACCATACTATTCCCAACACCAAG---TCGATTAATCAATAACCGTATAATCACTATCCAACAATGACTTACCAAACTCACATCAAAACAACTGATAATCACACACAATCCTAAAGGACAAACCTGATCTCTAATACTCATTTCACTTTTCTTTTTCATCGCCTCCACAAACCTTCTTGGAATATTACCTCACTCATTCACACCTACCACTCAACTCTCTATAAACTTAGGCATGGCCATTCCATTATGAGCTGGTACCGTTTTTATCGGTTTCCGCAATAAGACAAAAATATCTCTAGCCCACCTTTTACCATTAGGTACACCCACTTTCCTAATTCCTATGTTGGTAATAATCGAAACTATCAGCCTATTTATTCAACCCTTAGCTCTAGCAGTACGGCTAACAGCGAACATCACAGCAGGTCACCTATTACTACACCTAATTGGAAGTGCAACTCTTGCATTAATAAA---CATTAGCCTATTCACAGCTCTCATCACATTTATTATCCTCACTCTATTAGTCATCCTCGAATTCGCTGTAGCCCTAATCCAGGCCTACGTATTCACCCTACTAGTAAGCCTATACTTGCAAGACAATAC +>Myotis_macrodactylus_NC_022694 +------------ATGAACGAAAATCTATTTGCCTCTTTTATTACCCCAACG---ATAATAGGATTACCTATTGTTATACTTATCATCATATTTCCAAGTATGTTATTTCCATCAACAGCA---CGACTGGTTAATAACCGCTTAGTCTCAATTCAACAATGACTGATTCGCATAACAGCAAAACAAATAATAGCTATTCATAGCAAAAAAGGACAAACTTGAACACTTATATTAATATCACTTATTATATTCATTGGATCAACAAACCTATTAGGTCTCTTGCCCCACTCTTTTACTCCAACCACTCAATTATCAATAAACCTAGGCATAGCTATCCCCCTTTGAGCAGGTACAGTTATTTTAGGCTTTCGTCACAAAACAAAAGCATCTCTAGCACACTTTTTACCTCAAGGAACTCCACTGCCCCTAATTCCTATACTAGTTATTATTGAGACAATTAGCCTATTTATTCAACCAATAGCATTAGCAGTACGACTCACAGCAAATATTACTGCAGGACACTTGCTCATCCACTTAATTGGAGGAGCCACTCTGGCACTAATAAAT---ATCAGTATAACTACTGCTTTTATTACATTTATTATTCTAGTCTTACTAACAGTATTAGAATTCGCTGTTGCCCTAATTCAAGCATACGTCTTCACCCTACTAGTAAGTCTCTACTTACATGATAACGCC +>Vulpes_corsac_NC_023958 +------------TAATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCCA---CAATAATGGGTCTCCCAATCGTTGTGTTAATCGTAATATTCCCATCTATTTTATTCCCATCACCTA---ACCGGCTAATTAATAATCGATTAATTTCTATTCAACAATGATTGATTCAACTTACATCCAAACAGATACTAATAATTCACAACCAAAAAGGACGAACCTGAGCTCTTATACTGATATCACTAATTTTATTTATTGGCTCAACTAACCTTCTCGGATTGTTACCCCACTCATTTACACCCACAACCCAATTGTCTATAAACTTAGGAATAGCAATCCCCCTATGAGCGGGGACAGTGATTACCGGGTTCCGCCACAAAACTAAGGCTTCTCTAGCACACTTCCTGCCCCAAGGCACACCCCTCCCTCTTATCCCCATGCTAGTAATCATCGAGACAATCAGTCTATTTATCCAACCCATAGCCTTGGCTGTCCGACTAACAGCTAACATCACCGCAGGACACCTGTTGATTCATCTAATTGGAGGAGCCACTATAGCTTTAATCA---ACATCAGCGCTACCACGGCCCTCATTACTTTTACAATCCTAGTTCTACTTACCATTCTTGAGTTTGCCGTTGCTCTCATTCAGGCCTATGTCTTTACACTACTAGTAAGTCTATACTTACACGACAATA +>Sylvicapra_grimmia_isolate_SUN_NC_020747 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTAT---GATACTAGGCCTACCCCTTGTTACCCTCATTGTCCTATTTCCCAGTTTACTATTTCCAACATCAAA---TCGACTAGTTAACAACCGCCTCGTTTCCCTCCAACAATGACTACTCCAACTCATTTCAAAACAAATAATAAGCATCCATAACCCTAAAGGACAAACATGAACATTAATACTAATATCCCTAATCCTATTTATTGGATCAACAAATCTACTAGGCCTACTACCCCACTCATTTACACCAACCACACAACTATCGATGAACCTAGGCATAGCCATTCCCCTATGGGCAGGGGCTGTTGTCACAGGCTTCCGTAATAAAACCAAAGCATCGCTTGCCCACTTCCTACCACAAGGAACACCAACCCCATTAATTCCGATATTAGTGATTATCGAAACTATCAGCCTCTTTATTCAACCAGTAGCCCTCGCCGTCCGACTAACAGCCAACATCACAGCAGGACACCTACTAATTCACTTAATCGGAGGAGCCACACTTGCTCTAATAAG---CATTAGCACCACAACAGCTCTCATTACATTCATTATTTTAGTCCTACTAACAATTCTTGAATTCGCAGTAGCCATAATTCAAGCCTATGTATTTACCCTCCTAGTCAGCCTATACCTGCACGACAACAC +>Mus_spretus_NC_025952 +------------ATGAACGAAAATCTATTTGCCTCATTCATTACCCCAACA---ATAATAGGATTTCCAATCGTCGTAGCCATCATTATATTTCCTTCTATCCTATTTCCATCCTCAAAA---CGCCTAATTAACAACCGACTCCATTCTTTCCAACACTGACTAATTAAACTTATTATTAAACAAATAATACTAATTCACACACCAAAAGGACGGACATGAACTTTAATGATCGTATCCCTAATTATATTTATTGGATCAACAAATCTCCTAGGCCTTTTACCACATACATTTACACCTACTACCCAACTATCCATAAACCTAAGTATGGCCATCCCACTATGAGCTGGGGCCGTAATTACAGGATTTCGACATAAACTAAAAAGCTCCCTTGCCCACTTCCTTCCACAAGGAACCCCAATTTCACTAATCCCAATACTTATTATTATCGAAACAATTAGCCTATTTATTCAACCCATGGCATTAGCAGTCCGACTAACAGCTAACATCACCGCAGGACACTTATTAATACACCTAATCGGAGGGGCTACTCTAGTACTAATAAAC---ATTAGCCCGCCAACAGCTACCATTACATTTATTATTTTACTTCTTCTTACAGTCCTAGAATTTGCAGTAGCATTAATTCAAGCCTACGTATTTACCCTCTTAGTAAGCCTATACTTACATGACAATACA +>Trachypithecus_obscurus_NC_006900 +------------TAATGAACGAAAATTTATTTACCCCATTTACAACCCCAA---CACTCCTAAGTCTCCCCGCTGTGGTACCCATTATTCTATTTCCCACATTATTGTTTCCAACCTCTA---AACACCTTGTTAACAACCGACTAATTACTATCCAACAAAATTTAACTCAACTTATCCTAAAACAAATGATAATAATTCATAATACAAAAGGACGAACTTGATCCCTAATACTTATAGCTCTAATTATTTTCATTGCTACAACCAACCTCCTCGGGCTATTACCTCACTCATTTACACCTACCGCCCAGCTGTCTATGAATTTGGCAATGGCAATCCCTCTATGGGCTGGTACAGTAATTACAGGCCTTCGCTTCAAAACCAAAAGTTCCCTAGCCCATTTTTTACCACAAGGCACACCTACACTTCTTATTCCCATACTAGTGATTATTGAAACTATTAGTTTATTTATTCAACCAGTAGCCCTGGCTGTACGCCTAACCGCTAATATTACAGCAGGACATCTGCTCATGCATCTAATCGGAAGTGCCGTACTAGCACTATCAA---CCATTAATTTTCTTGTAACCTCACTGACCTTTGTACTCCTATTACTATTAACAATTCTAGAAATTGCAGTTGCCCTAATCCAAGCCTATGTTTTCACGCTCTTGGTAAGCCTTTATCTACATGATAATA +>Platanista_minor_NC_005275 +------------AATGAACGAAAATCTATTTACCTCCTTCACTGTTCCAAT---AGCCTTAGGCATCCCCATTACCACACTAATTATCATATTCCCTTCTATCCTATTTCCTACACCAAA---CCGACTGATTAATAACCGTACAATCTCCATCCAACAATGACTTATTAAACTCGCATCAAAACAAATTATAAACTTACATAACCTCAAAGGACAGACCTGATCTCTAATACTAACATCGCTCCTCCTATTTATCGCCTCCACAAATCTCCTTGGAATATTTCCCCACTCATTTACACCTACCACACAACTCTCAATAAACATCGGCATAGCCCTTCCCCTATGAGCCGGCACTATTATCACAGGCTTCCGCCACAAAACAAAATTGTCCCTAGCACATCTCCTGCCACAAGGTACACCCACTTTCCTCATTCCTATATTAGTAATAATTGAAACTATTAGCCTTCTTATTCAACCAGTAGCACTAGCCGTACGACTAACTGCCAACATCACAGCAGGTCACTTACTAATACATCTAATTGGACAAACAACTCTAGCCCTAATAAT---AATCAGCCCCTTTACCGCCCTCACCACATTCGTAATCCTTATTCTACTCACCATCCTCGAATTCGCTGTTGCCCTAATTCAAGCTTACGTGTTTACTCTCTTAGTAAGCCTATACCTGCATGACAACAC +>Tragelaphus_spekii_NC_020620 +------------ATGAACGAAAACCTATTTGCCTCTTTCATTACCCCAATA---ATTCTAGGCCTCCCTCTTGTAATTCTCGTCGTCTTATTCCCTAGTCTATTATTTCCAACATCAGAT---CGACTAGTAAACAATCGCCTCATCTCTCTCCAACAATGGGCACTCAAACTTGTATCAAAACAAATAATAACTATCCACAATACTAAAGGACAGACATGAACACTAATATTAATATCCCTAATCCTATTCATCGGGTCAACAAACCTATTAGGCCTCCTACCTCACTCATTTACACCAACCACGCAACTATCAATAAACCTAGGTATAGCCATCCCCCTGTGAGCAGGAGCTGTTATCACAGGATTTCGCAACAAAACCAAGACATCACTCGCCCACTTCTTACCACAGGGGACACCGACCCCGCTAATTCCAATACTAGTTATTATCGAAACTATCAGCCTTTTTATTCAACCAATGGCCCTTGCTGTACGACTAACAGCCAACATCACTGCAGGCCACCTGCTGATTCACCTGATTGGAGGAGCTACACTCGCACTAATAAAT---ATTAGCACCACAACCGCTTTCATCACGTTTATTATTCTGATCCTACTAACGATTCTAGAATTCGCAGTAGCCATAATCCAGGCCTATGTATTTACCCTCCTAGTTAGTCTATACTTACACAACAACACA +>Budorcas_taxicolor_NC_013069 +------------TAATGAACGAAAATCTATTTACCTCTTTCATTACCCCTG---TAATTCTAGGCCTCCCCCTTGTTACTCTCGTCATTTTATTCCCTAGCTTACTATTTCCTACATCAA---ACCGACTAATTAATAACCGCCTTATCTCCCTCCAACAATGAGCACTTCAACTCATGTCAAAACAAATAATAAGCACTCACAACACCAAAGGACAAACATGAACATTGATATTAATGTCCCTAATTCTATTTATTGGATCTACAAATTTATTAGGCTTATTACCCCATTCATTTACACCAACCACACAATTATCAATAAATTTAGGCATGGCTATTCCCCTATGAGCAGGGGCCGTAGTTACAGGCTTCCGCAACAAAACCAAAGCATCACTCGCCCACTTCCTACCACAAGGAACACCTACCCCACTAATCCCAATACTGGTAATTATCGAAACCATCAGCCTCTTCATCCAACCAGTAGCCCTTGCCGTACGATTAACAGCCAACATCACAGCAGGGCACTTATTAATTCACTTGATTGGAGGAGCTACCCTTGCATTATTAA---ATATCAATACCACAACAGCACTTATTACATTTACTATTTTAGCTCTACTAACAATCCTAGAATTCGCAGTAGCTATAATTCAAGCCTACGTATTCACCCTCCTAGTTAGCTTATATGTGCACGACAACA +>Lama_guanicoe_NC_011822 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAAC---AATAATAGGACTTCCTATTGTTACCCTTGTTGTTATATTCCCAAGTATATTATTTCCAACTCCTGC---CCGACTAATTAATAACCGCTTAATCTCTTTTCAACATTGGCTAATTCGACTCACATCTAAGCAAATAATAACTATTCACAACTACAAAGGACAGACCTGATCCTTAATGCTAATGTCTCTAATTATATTTATTGGGGCTACTAACCTTCTAGGACTCCTTCCGCACTCATTTACTCCTACCACACAGCTATCAATAAACTTAGGCATGGCAGTTCCTCTATGAGCTGGGACTGTAGTCACTGGCTTTCGCAATAAAACGAAAGCATCACTAGCACACTTCCTCCCCCAAGGAACGCCCACACCACTAATCCCCATATTAGTAATTATCGAGACTATCAGCCTGTTCATTCAACCCGTGGCCCTGGCCGTTCGACTAACAGCTAACATCACAGCAGGCCATTTATTGATACACCTAATTGGAGGGGCTACTCTAGCCTTAATAAA---CATCAGTACACTGACAGCCCTCCTTACTTTTGTGGTCCTAGTTTTACTTACAATCCTCGAATTTGCCGTGGCTATAATCCAAGCCTATGTTTTTACCCTATTAGTAAGCCTATACCTACATGACAATAC +>Lagostrophus_fasciatus_NC_008447 +------------ATGAACGAAAATTTATTTGCCACATTCGTCACCCCTACT---ATCATAGGTGTTACAACACTACCAATTATTATTCTCTTCCCATGCATACTGCTTAGTACACCAAAA---CGTTGACTACCAAATCGTATCCAAATTCTACAGATTTGACTAATTCGACTCATTACAAAGCAAATATTAACAATACACAACAAACAAGGCCGAACCTGAGCTCTCATACTGATATCCCTTATCCTATTTATTGCCTCCACCAACCTCCTAGGATTGCTACCATATTCTTTTACCCCTACAACCCAGCTCTCCATAAATATTGGCATAGCTATCCCACTATGATTAGCAACAGTCCTAATAGGATTCCGCAACAAACCCAAAGTATCACTAGCCCATTTTTTACCCCAAGGCACACCTACACCACTGATTCCTATACTAATTATTATTGAAACAATCAGCCTATTTATTCAACCCTTAGCATTAGCAGTACGACTAACTGCTAACATCACTGCTGGCCACCTACTTATTCACCTTATCGGTTCCGCAACATTAGCCCTATCCTCA---ATCAGCATAACAGTCTCAACCATCACATTTACCATTCTCTTCCTCCTAACAATTCTAGAATTAGCTGTAGCCATAATTCAAGCCTACGTTTTCACCCTCCTAGTAAGCCTGTACTTACATGACAACTCT +>Tamandua_tetradactyla_NC_004032 +------------TAATGAACGAAAATTTATTTGCCTCCTTCATCTCTCCAA---CGATAATAGGGCTCCCTATTGTCATACTAATTATCATATTCCCAACCATTCTTTTCCCAGCCCCAA---ACCGCCTAATCAACAACCGTATAATCTCCATACAACAATGACTAACTAACTTAGTACTAAAACAAATAATAATGATTCATAACCCAAAAGGACGAACCTGAGCACTAATGTTAACATCACTTATCATGTTTATCGGCTCAACAAACTTACTGGGCCTCCTACCACATTCATTTACCCCTACAACTCAGCTATCTATAAATCTAGGAATAGCCATCCCACTGTGGGCTGGAACAGTAATCATAGGATTCCGCCACAAGACTAAATCAGCACTAGCACATTTCCTACCACAGGGAACTCCAATATCACTGATCCCAATACTAATTATCATCGAAACAATCAGCCTATTTATTCAACCAATTGCCCTAGCAGTACGACTAACAGCCAACATCACAGCAGGCCACCTACTAATGCACCTAATTGGAGGAGCTACATTAGCACTAATAT---CTATTAGCCCTACAACGGCACTAATTACATTCATTATTCTAGTCCTATTAACTATACTTGAATTCGCAGTAGCCCTAATCCAAGCCTACGTATTCACCCTCCTAGTAAGCCTATACCTACACGATAACA +>Petaurus_breviceps_NC_008135 +------------AATGAACGAAAATTTATTTGCCCCATTCATCACCCCTAC---TATCCTAGGTATTACTACACTACCAATCATCATATGCTTCCCATGTCTACTACTTAGTTCACCTAA---ACGTTGACTACCAAATCGCATCCTAATTATACAGATCTGATTAATTCGTTTAGTCACCAAACAAATAATAGTTATACATAACAAACAAGGTCGAGCTTGAACTCTAATGCTCATATCACTTATGCTTTTCATTGCATCAACCAACCTGCTAGGACTTCTCCCATACTCATTTACCCCAACCACTCAACTTTCTATAAATATTGGTATGGCTATCCCTCTATGGCTTGGCACAGTAGTGATAGGCTTCCGAAACAAACCTAAAATAGCCCTAGCCCACTTTCTTCCACAAGGAACACCAACACCACTGATTCCAATGCTTATTATTATTGAAACAATCAGCCTATTCATCCAACCACTAGCCCTAGCAGTACGGCTAACAGCTAATATCACCGCTGGACACCTACTCATTCACCTAATTGGCTCAGCTACCCTGGCCTTATCATC---TATTAGCATAACAGTATCAACTATTACATTTACAATTCTATTCCTTCTGACAATCCTGGAACTAGCAGTAGCCGTTATCCAAGCTTATGTTTTCACACTTCTAGTAAGCCTATACTTACATGATAACTC +>Equus_asinus_NC_001788 +------------ATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCAACA---ATAATAGGCCTCCCTATTGTAATCCTAATCATTATATTCCCCAGCATCCTATTTCCCTCATCCAAC---CGACTAATTAACAATCGCCTAATCTCAATCCAACAATGGCTAGTCCAACTTACATCAAAACAAATAATAACCATCCATAACAATAAAGGACAAACCTGAACCCTCATACTCATGTCGCTAATCCTATTCATTGGTTCAACAAACTTATTGGGCCTACTACCCCACTCATTTACACCAACAACACAACTATCAATAAACCTAGGCATAGCCATCCCCCTGTGAGCAGGAACAGTATTCATAGGCTTTCGTCATAAAACAAAAGCAGCTCTAGCTCACTTTCTACCCCAAGGAACGCCCATTTTCCTCATTCCCATACTAGTAATTATTGAGACTATCAGTCTATTTATTCAACCAATAGCTCTAGCCGTACGGCTAACTGCTAATATTACTGCCGGACATCTTCTAATCCACCTTATCGGAGGAGCAACGCTAGCCCTCATAGAC---ATTAGCCCCTCAACAGCCCTTATTACATTCATTATCCTGATTCTACTAACTATCCTCGAATTCGCAGTAGCCATAATCCAAGCCTATGTATTCACTCTCCTAGTAAGTCTCTACCTACACGATAACACC +>Oryx_dammah_NC_016421 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTA---TAATTCTAGGCCTTCCCCTTGTTACCCTAATCGTCTTATTCCCTAGCTTACTGTCTCCTACATCAA---ACCGACTAATCAACAACCGCCTCATCTCTCTCCAACAATGAATACTCCAACTTGTATCAAAACAAATAATAAGTATTCACAATGCCAAAGGACAAACATGAACGCTAATACTAATATCCCTGATTCTATTCATTGGATCAACAAACTTACTAGGCCTACTACCCCACTCATTTACACCAACCACACAACTGTCAATAAATTTAGGCATGGCTATCCCTCTATGAGCAGGAGCTGTTATTACAGGCTTCCGTAACAAAACTAAAGCATCACTTGCCCATTTCTTACCACAAGGTACACCAACCCCACTAATTCCAATGCTAGTAATTACCGAGACTATTAGCCTTTTTATTCAACCAATAGCCCTTGCTGTACGACTAACAGCCAATATCACAGCAGGACACCTATTAATTCATTTAATCGGAGGAGCCACCCTAGCACTAATAA---GCATTAGCACCACAACTGCCTTTATTACATTTATTGTCCTGATTCTACTAACAATTCTCGAGTTCGCAGTAGCTATAATTCAAGCCTACGTATTTACCCTCTTAGTCAGCCTATACTTGCACGATAACA +>Pygathrix_nigripes_NC_018061 +------------AATGAACGAAAATTTATTTACCTCATTTACACATCCAAC---ACTACTAGGCCTACCAGCTGTAGTACCTATTATTCTATTTCCTACATTACTACTCCCAACCTCAAA---ATATCTTATTAACAATCGACTAGTTACTATTCAACAAAACCTAATTCAGTTAATTGTAAAACAAATAATAGCAATTCATAATACCAAAGGACAAACCTGATCCCTAATACTGATATCCCTAATTATTTTTATTGCCACAACCAACCTTCTCGGGCTCTTACCCCACTCATTTACACCTACCGCCCAACTATCAATAAATCTAGCCATAGCTATCCCTCTATGGGCAGGTACAGTAATTACAGGTCTCCGCTTCAAAACTAAAAGCTCCTTGGCTCACTTTTTACCACAAGGTACACCCACACCACTTATCCCCATATTAGTAGTTATTGAAACCATCAGCTTATTTATTCAACCAGTAGCCCTAGCTGTACGCCTAACCGCCAATATTACAGCAGGGCATCTACTTATGCACCTAATCGGAAGTGCTACACTAGTGTTATCAAC---CATCAGCTTCTCTATGACCTCGTTAACTTTAGTGCTTTTAGTATTATTAACAATTCTAGAGATAGCAGTTGCCCTAATTCAGGCCTACGTTTTTACACTCTTGGTAAGCCTTTACCTACACGACAACAC +>Bradypus_variegatus_NC_006923 +------------ATGAACGAAAACCTGTTTGCCTCTTTTACCACTCCCACA---ATAATAAACATCCCCATCGCGCTCTTTATCGTGGCACTCCCAACCCTACTATTTCCATCACCTAAT---CGTCTAATCAACAACCGAATCGTCTCTATACAACAATGAACTACCAACCTGATCCTAAAACGAATAATAATCACTCACGGCCCAAAAGGACAAACCTGATCCCTAATACTAGTTTCACTAATTATCTTTATCGGAACAACAAACCTCCTGGGCCTACTTCCCCACTCGTTCACCCCCACAACTCAGCTCTCCATAAACTTAGGAATAGCTATCCCACTGTGAGCTGGAACAGTAGCTGTAGGCTTCCGCCACAAAACCAAAGCATCACTAGCCCACCTCCTACCACAAGGCACCCCGACCCCCCTTATTCCCATACTAGTGATCATCGAAACAATTAGTCTACTTATCCAACCCGTAGCCCTAGCCGTACGACTCACGGCAAACATCACTGCAGGGCACATACTCATGTACCTAACCGGAAGCGCCACACTAACATTAATATCT---ATCAACCCCATAGCAGCCTTAACTTCTTTCATCATCCTAACCTTGCTAACAATTTTAGAATTTGCAGTAGCACTAATTCAGGCCTACGTCTTCACACTCCTAATCAACCTCTACCTGCGCAATAATACT +>Canis_lupus_lupus_NC_009686 +------------TAATGAACGAAAATCTATTCGCTTCTTTCGCTGCCCCCT---CAATAATAGGTCTCCCTATTGTGGTACTGATCGTCATATTCCCTTCCATTTTATTCCCAACACCCA---GTCGCCTAATCAATAATCGGTTAATCTCCATTCAGCAATGACTAATTCAACTAACATCAAAACAAATACTAGCAATTCATAACCAAAAGGGACGAACCTGAGCTCTCATACTTATATCACTAATTCTATTTATTGGCTCAACTAATCTACTTGGCCTACTACCTCACTCATTTACGCCCACAACACAACTCTCTATAAACCTCGGAATAGCAATCCCCCTATGAGCAGGGACAGTAATTACCGGTTTCCGCTATAAGACCAAAGCATCCTTAGCACACTTTCTACCCCAAGGCACCCCTCTTCCCCTAATTCCAATACTAGTAGTCATCGAAACTATTAGTCTATTTATTCAACCCATAGCTCTAGCCGTTCGATTAACCGCCAATATTACTGCAGGACACCTCCTAATCCATTTGATTGGAGGGGCTACCTTAGCTCTTATCA---ATATTAGCGCGACCACAGCTTTTATCACTTTTATTATTCTAATCCTACTTACGATCCTGGAATTTGCTGTTGCCTTAATTCAAGCCTATGTTTTTACCTTACTAGTGAGTCTATACTTACATGACAACA +>Nanger_soemmerringii_isolate_AWWP_NC_020726 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTAT---AATTCTAGGTCTTCCCCTCGTCACCCTTATTGTCCTATTTCCCAGCTTATTATTTCCAACATCAAA---CCGACTAATAAGCAATCGCCTTATCTCTCTTCAACAATGAGCACTTCAACTTGTATCCAAACAAATAATGAGCATCCATAACCCTAAAGGACAAACATGAGCACTAATACTGATATCCCTAATTCTATTTATTGGATCAACGAACTTATTAGGCCTACTACCCCACTCTTTTACACCAACTACACAACTATCAATAAACTTAGGCATAGCTATTCCCCTATGAGCAGGAGCTGTAATCACGGGCTTCCGCAACAAAACCAAGGCATCACTTGCTCACTTTTTACCACAAGGAACACCCACTCCCCTAATCCCTATACTGGTAATTATCGAAACTATTAGCCTATTTATTCAACCAGTAGCCCTTGCAGTACGACTAACAGCCAACATTACAGCAGGACACCTATTAATTCACTTGATTGGAGGAGCCACATTAGCACTAATAAA---CATCAGCACTACAACAGCTCTCATTACATTTATTATCTTAGTCCTACTAACAATCCTTGAATTCGCAGTAGCCATAATTCAAGCTTACGTATTCACTCTTCTAGTCAGCCTATACTTACACGATAACAC +>Dremomys_rufigenis_NC_026442 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTACA---TTAATAGGACTTCCCATTGTTATCCTTATTATCCTATTCCCCAACATCCTCTTTCCATCGCCTAAC---CGACTTATCAACAATCGACTAGTCTCATTTCAACAATGACTCATTCAACTCGTACTAAAACAAATAATAATGATACACAACTTAAAAGGACGAACCTGATCCCTAATATTAATTTCACTAATTATATTTATCGGATCAACAAATCTACTAGGACTTTTACCCCACTCCTTTACACCTACCACGCAACTATCAATAAACCTCGGCATAGCCATCCCACTATGAGCTGGAGCAGTAATTACAGGCTTCCGCCATAAGACCAAAGCATCTCTAGCCCACTTCCTTCCCCAAGGAACACCAATTCCCCTAATTCCCATACTAATCATTATTGAAACAATCAGCTTATTCATTCAACCAATAGCCCTAGCTGTTCGACTCACAGCTAATATTACAGCTGGCCACTTACTCATACACTTAATTGGAGGCGCTACACTAGTCCTAACCTCC---ATTAGTCCACCAGCAGCAATAATCACATTCATCATCCTTATTTTATTAACAATTCTCGAATTTGCCGTTGCCCTGATCCAAGCTTACGTCTTCACATTACTAGTAAGCCTATATTTACATGATAACACC +>Myotis_ikonnikovi_NC_022698 +------------TAATGAACGAAAATTTATTTGCCTCTTTCATTACCCCAA---CGATAATAGGATTACCTATTGTCGTACTTATTATTATGTTTCCAAGTATATTATTCCCATCAACAA---CACGACTAATTAATAATCGCCTAGTCTCAATTCAACAGTGACTAATTCGCATGACAACAAAACAAATAATAGCTATTCATAGCAAGAAGGGCCAAACCTGAGCACTCATATTAATCTCACTTATTATATTTATCGGCTCAACAAATTTACTAGGCCTTTTACCACATTCTTTTACCCCAACCACTCAATTATCAATAAATCTGGGCATGGCCATTCCCCTTTGAGCAGGTACTGTTATCTTAGGCTTTCGCCATAAAACAAAAGCATCTCTAGCACATTTTTTACCTCAGGGAACACCACTGCCCCTGATTCCTATATTAGTAATTATTGAAACAATTAGCCTATTCATCCAACCAATAGCACTAGCAGTACGACTTACAGCAAATATCACTGCAGGACATTTACTTATCCATTTAATCGGAGGGGCTACCCTAGCACTAATGA---ATATCAGCATAACTACTGCCTTCATTACATTTATTATTTTAGTCCTATTAACAGTATTAGAATTTGCCGTTGCCTTAATTCAAGCATATGTATTCACTCTACTAGTAAGTCTCTATTTACACGATAATG +>Martes_melampus_NC_009678 +------------AATGAACGAAAATTTATTCTCCTCTTTCATTACCCCTAC---AATAATAGGACTCCCTATTGTTATCGCCATCACTATATTCCCAAGCATCATATTTCCCTCACCAAC---CCGGTTAATCAATAACCGGCTCATCTCCATCCAACAGTGATTGGTACAGCTAACATCGAAACAAATACTGTCTATTCACAATCAAAAAGGACAAACCTGAGCACTAATATTAATATCCCTAATCCTATTTATTGGCTCCACCAATCTACTAGGCCTCCTACCGCACTCATTCACTCCCACCACGCAACTATCCCTAAATCTGGGCATAGCTATCCCCCTATGAGCGGGCACAGTAATTACTGGCTTCCGGCATAAAACAAAGGCCTCCTTAGCCCACTTCCTACCACAAGGCACGCCGCTTCCTCTAATTCCCATGCTTGTAGTCATTGAAACCATCAGCCTATTCATTCAACCCATAGCCCTGGCCGTGCGACTAACAGCCAACATCACTGCAGGTCACTTATTAATCCACCTAATTGGAGGAGCCACCCTAGCCTTAATGAG---TATCAGCACTGTCACAGCCATAGTGACCTTCACCATCCTCATCCTTCTAACCATCTTAGAGTTTGCAGTAGCCCTTATCCAAGCCTACGTCTTTACTTTACTAGTAAGCCTGTACTTACATGATAACAC +>Capra_pyrenaica_NC_020625 +------------ATGAACGAAAATCTATTTACCTCTTTTATTACCCCTATA---GTATTAGGCCTCCCCCTTGTTACCCTTATTATTTTATTTCCTAGCTTACTATTTCCCTCATCAAAC---CGACTAATTAACAACCGCCTCATCTCTCTCCAACAATGGGCACTCCAACTCGTATCAAAACAAATAATAAGTATTCACAATACTAAAGGACAAACATGAACATTAATATTAATGTCCCTAATCCTATTTATTGGATCTACAAATCTATTAGGCCTTCTACCCCACTCATTCACACCAACTACACAGCTATCAATAAACCTAGGCATGGCTATTCCCTTATGAGCAGGGGCCGTAATCACAGGTTTTCGCAATAAAACTAAAACATCATTTGCCCATTTCCTACCACAAGGAACGCCCACACCACTAATCCCAATACTAGTAATTATTGAAACCATTAGCCTCTTTATCCAACCAATAGCCCTTGCCGTACGACTAACAGCCAACATCACAGCAGGACACTTATTAATTCACTTAATCGGAGGAGCCACCCTTGCACTAACAAAC---ATCAGTCCCACAACAGCACTCATTACATTCATTATTCTAATTCTACTAACAATTCTCGAATTCGCAGTAGCTATAATCCAAGCCTACGTATTTACTCTCCTAGTCAGCCTATACCTGCATGACAACACA +>Neotragus_batesi_isolate_CAR86_NC_020727 +------------TAATGAACGAAAACCTATTTGCCTCTTTCATTACCCCAA---TAATTCTAGGCCTCCCCCTCGTTACTCTAATTGTCCTATTTCCCAGTCTATTATTCCCAACGTCAA---ACCGACTCACAAATAATCGCCTTATTTCTCTCCAACAATGAATACTCCAAATCATCTCAAAACAAATAATAAGCATTCACAATTCCAAAGGACAAACATGAGCATTAATACTTATATCTCTAATCTTATTTATCGGATCAACAAATCTCCTAGGTTTACTACCCCACTCATTTACACCAACCACACAACTATCAATAAACCTAGGAATAGCCATTCCTCTATGAGCAGGAACTGTAATTACAGGCTTCCGTAACAAAACAAAAGCATCACTTGCCCATTTTTTACCACAAGGAACACCAACTCCACTAATTCCAATGTTAATTATCATTGAGACTATTAGCCTTTTCATCCAACCAATAGCCTTAGCTGTACGATTAACAGCAAACATTACCGCAGGCCACCTACTAATTCACCTTATTGGAGGAGCTACCCTTGCACTAATAA---GTATTAGCACTACAATAGCCTTAATCACATTTATTATTCTAATCCTACTAACAATTCTTGAATTTGCAGTAGCTATAATTCAAGCTTACGTATTTACCCTCTTAGTAAGCCTATATCTGCACGACAACA +>Axis_axis_isolate_CYTO_NC_020680 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAAT---AATTCTAGGCCTTCCACTCGCTACTCTCATCGTTATATTCCCTAGTCTACTATTTCCAACATCAAA---TCGTCTAGTAAATAATCGCTTTATTTCCCTCCAACAATGAATACTTCAACTCGTATCAAAGCAAATAATAGGAATTCACAATGCCAAAGGACAAATATGAGCATTAATACTCATATCTTTAATTCTATTTATTGGGTCCACAAATCTACTGGGCCTACTACCCCACTCATTTACACCAACCACACAATTGTCAATAAATTTAGGCATAGCCATCCCCCTGTGAGCAGGAACTGTAGTTACAGGTTTCCGCAATAAAGCTAAAGCATCATTTGCTCATTTTCTTCCACAAGGAACCCCAACTCCATTAATTCCTATACTAGTTATTATTGAAACTATTAGCCTTTTTATTCAACCAATCGCCTTAGCCGTACGATTAACAGCCAATATTACTGCAGGACACCTGCTAATTCACCTAATTGGAGGAGCTACACTTGCACTAATAAG---CATCAGTACTACAATAGCCTTAATCACATTTATTGTTCTAGTACTACTCACAATCCTTGAATTTGCAGTAGCCATAATTCAAGCATATGTATTTACTCTTCTAGTCAGCCTTTACTTGCATGACAACAC +>Chlorocebus_pygerythrus_NC_009747 +------------ATGAACGAAAATCTATTTACCTCATTCGCAACTCCAATA---ATCCTAGACCAACCTGCTACAATCCCTATCATTATATTCCCCATATTATTAATCCCAACGTCCAAA---CATCTCATTAACAACCGACTAATCACTATCCAACGCAACCTAGTACTATTCACTCTAAAGCAAATAATAATAGCCCATAATACTAAAGGGCGAACCTGATCTCTAATACTAGTATCCCTAATTACCTTTATTACCACAACTAACCTTCTGGGACTCCTACCCCACTCATTTACACCCACCACCCAGCTATCTATAAACCTCGCTATAGCAATCCCCTTATGAGCTGGCACAGTAATCATAGGCCTCCGTTTTAAAACCGAAAGCTCCCTGGCCCACCTCCTACCACAAGGCACACCAACATTGCTCATCCCCATACTAGTAATAATCGAAACCATTAGCCTGGTCATCCAACCAGTAGCCCTAGCCGTACGCTTAACCGCTAACATTACGGCCGGTCACCTGCTAATACACCTAATTGGAAACGCAACACTAACACTACTAACT---ATCAGCCCCCCCGCTACTTCACTAATCTTTACACTCCTAACACTACTTACCATCCTAGAGATCGCAGTTGCTTTAATCCAAGCCTATGTTTTCACACTTCTAGTTAGCCTTTATTTACACAACAACACC +>Cephalorhynchus_heavisidii_isolate_SUN_NC_020696 +------------TAATGAACGAAAATCTATTTGCCCCTTTCATAATCCCAG---TTGTACTAGGTTTTCCTATTACTACTCTAATTATTATATTTCCCACCATACTATTCCCAACACCAA---ATCGATTAATCAATAACCGTGTAATCGCTATTCAACAATGACTTACCAAACTCACATCAAAGCAGCTGATAACCACACATAACCCCAAAGGACAAACCTGATCTCTAATACTCATCTCACTTTTCCTCTTCATCGCATCCACAAACCTCCTTGGAATATTACCCCACTCATTCACACCTACTACTCAACTCTCTATAAACTTAGGCATAGCTATTCCACTATGAGCTGGCACCGTCTTTATCGGCTTCCGTAATAAGACAAAAATATCTCTAGCCCATCTTCTACCATTAGGCACACCCACTTTCCTAATTCCCATACTAGTAATAATTGAAACTATCAGCCTATTCATTCAACCCCTAGCCCTAGCAGTACGGCTAACAGCGAACATCACAGCAGGTCACCTATTACTACACCTAATTGGAAGTGCAACCCTTGCATTAACAA---ACATTAGTCTATTCACAGCCCTCATCACATTTACTGTCCTCACTCTATTAGTTATCCTCGAATTCGCTGTAGCCCTAATTCAGGCCTACGTATTCACCCTACTAGTAAGCCTGTACTTGCAAGACAATA +>Chlorocebus_cynosuros_NC_024933 +------------AATGAACGAAAATCTATTTACCTCATTCGCAACTCCAAT---AATCCTAGACCAACCTGCTACAATCCCTATCATTATATTCCCCATATTATTAATCCCAACGTCCAA---ACATCTCATTAACAACCGACTAATCACTATCCAACGCAACCTAGTACTATTCACTCTAAAGCAAATAATAATAACCCATAATGCTAAAGGGCGAACCTGATCTCTAATACTAATATCCCTAATTACCTTTATTACCACAACTAACCTTCTAGGACTCCTACCCCACTCATTTACACCTACCACCCAGCTATCTATAAACCTCGCTATAGCAATCCCCTTATGAGCTGGCACAGTAATCATAGGCCTCCGCTTTAAAACCGAGAGCTCCCTGGCCCACCTCCTACCACAAGGCACGCCAACATTGCTCATCCCCATACTAGTAATAATCGAAACCATTAGCCTGGTCATCCAACCAGTAGCCCTAGCCGTACGCTTAACCGCTAACATTACGGCCGGTCACCTGCTAATACACCTAATTGGAAACGCAACACTAACACTACTAAC---TATCAGCCCCCCCGCTACTTCACTAGTCTTTACACTCCTAACACTACTTACCATCCTAGAGATCGCAGTTGCTTTAATCCAAGCCTATGTTTTCACACTTCTAGTTAGCCTTTATTTACACAACAACAC +>Equus_caballus_NC_001640 +------------ATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCAACA---ATAGTAGGCCTCCCTATTGTAATTCTGATCATCATATTTCCCAGCATCCTATTCCCCTCACCCAAC---CGACTAATCAACAATCGCCTAATCTCAATTCAACAATGGCTAGTCCAACTTACATCAAAACAAATAATAGCTATCCATAACAGCAAAGGACAAACCTGAACTCTTATACTCATATCACTGATCCTATTCATTGGCTCAACAAACTTATTAGGCCTACTACCTCACTCATTTACACCAACAACACAACTATCAATAAACCTAGGCATAGCTATTCCCCTATGGGCAGGGACAGTATTCATAGGCTTTCGTCACAAAACAAAAGCAGCCCTAGCCCACTTTCTACCTCAAGGGACGCCCATTTTCCTCATCCCCATACTAGTAATTATCGAGACTATCAGCCTATTTATTCAACCTGTAGCCCTAGCCGTGCGGCTAACCGCTAACATTACCGCCGGACACCTCCTAATACACCTCATCGGAGGGGCAACACTAGCCCTCATAAGC---ATCAGCCCCTCAACAGCCCTTATTACGTTTATCATCCTAATTCTACTAACTATCCTCGAATTCGCAGTAGCTATAATCCAAGCCTACGTATTCACTCTCCTGGTAAGCCTTTACTTACACGACAACACC +>Trinomys_dimidiatus_NC_021388 +------------TAATGAACGAAAATTTATTCGCCTCTTTCATAACACCCA---CAATACTAGGACTTCCAATTGTTATCCTTATTATTATATTTCCAACCATCTTATTTCCTAGCCCCA---AACAACTAATCAATAACCGCATAATTACAATTCAACAATGATTGGTCAAATCAACTCTTAAACAAATAATACTAATCCACAGCACTAAAGGACGCTCTTGAGCATTAATATTAACCACCCTAATTCTATTCATTGGGACAACCAATTTACTAGGCCTCCTCCCACACTCTTTCACACCCACTACTCAATTATCTATAAACCTGGGAATAGCAATCCCATTGTGAGCTGGGACAGTACTTTTAGGCTTCCGTCACAAAACAAAAACATCCTTAGCTCATTTTCTCCCCCAAGGCACCCCAGCCCCTCTTATCCCAATACTAGTGATAATCGAGACTATTAGCTTGTTCATTCAACCCGTAGCTCTAGCAGTACGCCTAACCGCCAATATTACTGCAGGTCACTTACTAATACACCTAATTGGAGGGGCAACCTCTATCTTAATAA---CCATCAGCACCCCAATTGCGCTAACAACGTTTATTATTCTTCTTCTACTTACAATACTCGAATTCGCTGTAGCATTAATTCAAGCATATGTCTTCACCCTTCTAGTTAGCCTCTACTTACACGATAACA +>Myotis_brandtii_NC_025308 +------------AATGAACGAAAATTTATTTGCCTCTTTCATTACCCCTAC---AATAATGGGCCTACCCATTGTTGTTCTTATTATTATGTTTCCAGGCATATTATTCCCCTCAACAAC---CCGATTAATTAACAACCGGTTAGTTTCTATCCAACAATGACTTATCCGCATGACAACTAAACAAATAATATCTATCCATAATAAAAAGGGTCAGACCTGAGCACTTATACTAATATCACTTATTATATTCATTGGCTCAACAAACCTATTAGGTCTTTTACCACATTCTTTCACCCCTACTACTCAATTATCAATAAACCTAGGTATGGCTATCCCGCTTTGAGCTGGCACAGTCATTTTGGGGTTTCGCCATAAAACAAAAGCATCTTTAGCACACTTTCTACCCCAAGGAACACCATTGCCCCTAATTCCCATACTGGTAATTATCGAGACAATTAGCTTATTTATCCAGCCGATAGCATTAGCAGTGCGACTCACAGCAAATATCACTGCGGGACACTTACTCATCCACTTAATTGGAGGGGCCACCCTAGCACTAATAAG---TATTAGCATAACTACCGCTTTTATTACATTTGTAATCCTAGTTTTACTAACAGTATTAGAGTTTGCTGTCGCTCTGATTCAAGCATATGTCTTTACTCTACTAGTCAGCCTCTATCTACATGATAATGC +>Mirza_coquereli_NC_023840 +------------ATGAACGAAAATCTATTCGCCTCATTCATTGTCCCAACA---ATCGTAGGAATTCCTGTTGTAATCCTCATTATTATGTTTCCCAATATTTTCTTTCACAACCCCTAC---CGTACTATCGGCAACCGACTTACATCCCTACAACAATGATTAATTAAATTAGTACTCAAGCAAATAATAGCTATGCATAACATCAAAGGACGAACTTGATCACTTATATTAATTTCACTTATCCTATTCATTGGTTCTACTAACTTACTAGGCTTACTACCCCACTCATTTACTCCTACCACTCAACTGTCAATAAACTTAGGTATGGCTATCCCCCTGTGAACAGCCACAGTAATTATAGGTTTTCGCCATAAAATAAAAAAATCCTTAGCCCATTTCTTACCTCAAGGAACACCTATTCCTCTCATTCCTATATTAATTATTATTGAAACAATCAGTCTATTCATTCAACCCATAGCACTAGCCGTACGACTAACAGCCAACATTACAGCGGGCCATTTATTGATTCACCTGATTAGCGGGGCTACAATAGTACTGACCTCA---ATCAGCCCTGTTGTTTCCTCTATTACATTTATTATCTTAATCCTTCTTACAGTACTTGAATTTGCTGTTGCTCTCATTCAAGCATATGTTTTTACTCTATTAGTAAGCCTCTATCTACACGATAATACT +>Chlorocebus_sabaeus_NC_008066 +------------TAATGAACGAAAATTTATTTACCTTATTCGCAACTCCAA---TAATCCTAAACCAACCTGCTACAATCCCCATCATCATATTCCCCGTACTACTAATTCCAACTTCCA---AACACCTCATTAACAACCGACTAACCACTATTCAACGTAACCTAGTACTACTCGCTCTAAAGCAAATAATAATAACCCACAATGCTAAGGGGCGAACCTGGTCCCTAATACTAATGTCTCTAATCACCTTTATCACCACAACTAATCTCCTAGGACTTCTACCCCACTCATTTACACCTACCACCCCAACTATCTATAAACCTCGCTATAGCAATCCCTTATGAGCCGCAACAGCAATCACAGGCCTTCGCTTTAAAACCAAAAACTCCCTAGCTCACCTCCTACCACAAGGCACACCAACATTACTCATTCCCATACTAGTAATAATCGAAACCATTAGCTTGATTATTCAACCAGTGGCCCTAGCTGTACGCTTAACTGCCAACATCACGGCCGGCCACCTGCTAATACACCTAATCGGAAACACTGCACTAACACTACTAA---GTATCAGCCCCCCCGCTGCTTTACTAACCTTTACACTTCTAATACTACTCACCATCCTAGAGATCGCAGTTGCTTTAATCCAAGCCTATGTTTTCACACTTCTAGTTAGCCTCTATTTACACAACAACA +>Theropithecus_gelada_NC_019802 +------------AATGAACGAAAATCTATTTACCCCATTCTCAACCCCAAC---AATCCTAGGACAATCCGCCACAATCCCAATCACCATATTCCCCACGCTACTAATCCCAACCTCTAA---ACACCTCATCAACAACCAGCTAGTCACCATTCAACAAAATCTCACCAAACTTACCCTAAAACAAATAATAGCACCCCACAATGCTAAAGGACAATCTTGATCTCTAATACTAATATCCTTAATCACCTTTATTACCATAACCAATCTCCTAGGACTTCTACCCTACTCATTCACGCCAACCACCCAACTCTCTATAAACTTAGCCATGGCAATCCCCCTGTGGACAGGCACGATCATTACTGGCCTTCGCTTTAAAACTAAAAACTCCCTAGCCCACATTCTACCACAAGGCACACCCACACCCCTTATTCCCATACTAGTAATAATCGAGACCATTAGTCTACTTATTCAACCAATAGCCCTAGCTGTACGACTAACTGCTAATATCACAGCTGGCCATCTATTAATTCACCTAATCGGAAATACTGTATTAACACTATCAAC---CGTCAGCCTCTCCACCACCCTACTAATTTCCATGCTCCTAGCACTATTAACCATCTTAGAAGTCGCAGTTGCCTTAATTCAAGCCTACGTCTTCACACTCTTAGTCAGCCTATACCTACATAACAACAC +>Erignathus_barbatus_NC_008426 +------------ATGAACGAAAATCTATTCGCCTCTTTCACTACCCCTACA---ATAATAGGTCTTCCTATCGTTATCCTAATTATCTTATTTCCAAGTATTCTATTTCCCTCTCCCAAT---CGACTAGTTAATAATCGTCTTACCTCAATCCAACAATGACTAATTCAACTGACATCAAAACAAATACTGTCAATTCACAACCACAAAGGACAAACGTGAGCACTAATACTTATATCACTAATCCTATTTATCGGAACCACCAACCTATTAGGCCTTCTACCACATTCATTCACCCCTACCACCCAACTGTCTATAAATCTAGGGATAGCCATTCCCTTATGAGCAGGAACAGTCATCACAGGATTCCGATACAAAACGAAAGCATCTTTAGCCCACTTTCTGCCCCAAGGAACACCTTTACTCCTTATCCCAATACTGGTAATCATCGAAACTATTAGCCTATTTATTCAACCTATAGCCCTAGCCGTACGGTTAACAGCCAATATTACCGCAGGCCACCTACTAATTCACCTAATTGGAGGGGCCACCCTCGCCCTTATAGAT---ATCAGCACCACTACGGCACTTATTACTTTTACCATCCTCATTCTACTTACCATCCTTGAATTCGCTGTAGCCCTCATTCAAGCCTACGTCTTTACCCTACTAGTAAGCTTATATCTACATGACAATACC +>Eumetopias_jubatus_NC_004030 +------------TAATGAACGAAAATCTATTCACCTCTTTCGCTTCCCCTA---CAATAATAGGCCTTCCCATCGTAACCCTAGTCATTCTATTTCCAAGTATACTATTTCCTTCACCAA---GCCGACTAATCAACAACCGCCTTACCTCCATTCAACAGTGACTTATCCAATTAACATCAAAACAAATAATATTAATACATAATCACAAAGGACAAACATGAACATTAATACTTATATCACTCATCATATTTATTGGATCTACTAATCTACTGGGCCTACTACCGCACTCATTTACCCCCACTACCCAACTATCTATAAATCTAGGAATAGCCATCCCCCTATGAGCAGGGACAGTCGCCATAGGGTTACGACACAAAACTAAAGCATCCTTAGCCCACTTCCTACCCCAGGGAACACCCTCCCCCCTCATCCCAATATTAGTAATCATCGAATCTATTAGCTTACTCATCCAACCCATAGCCTTAGCCGTACGACTAACAGCCAACATCACTGCAGGCCACCTACTAATTCACCTAATCGGTGGGGCCACCCTAGCCCTTATTA---ACATCAGTATAATTTCGGCCTTTATCACCTTCATTATCCTCACCCTACTTACAATCCTTGAGTTCGCTGTAGCCTTAATCCAAGCCTACGTCTTCACTTTACTAGTAAGCCTATACTTACACGATAACA +>Moschus_moschiferus_NC_013753 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAAT---AATTCTAGGCCTTCCCCTTGCTACTCTTATTGTAATATTCCCCAGCCTATTATTCCCAACATCAAA---TCGATTAATCAATAATCGTCTCCTCTCCCTTCAACAATGAATACTTCAACTTGCATCAAAACAAATAATAGGAATTCACAACACTAAAGGACAAACATGAACACTTATACTAATATCTCTAATCTTATTTATTGGCTCAACAAATCTACTAGGCCTACTTCCCCACTCATTTACACCAACTACACAACTATCAATAAATCTAGGCATGGCTATCCCCTGATGAGCAGGCGCTGTAATTACAGGATTCCGTAACAAAACTAAAGCATCTCTTGCTCACTTCCTACCACAAGGAACACCTACTCCACTAATCCCAATGCTAGTAATTATTGAAACTATTAGCCTCTTCATCCAACCAATGGCCTTAGCAGTACGATTAACAGCCAATATCACTGCAGGACACCTATTAATTCATCTAATCGGAGGAGCCACACTTGCATTAATAAA---TATCAGCACCACAACAGCCCTCATTACATTCATTATCCTAATCCTACTCACAATTCTTGAGTTTGCAGTAGCCATAATCCAAGCTTACGTATTTACTCTTCTAGTAAGCCTATACCTGCATGACAACAC +>Phoca_vitulina_NC_001325 +------------ATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCTACA---ATAATAGGTCTTCCTATCGTAATCCTAATTGTCCTATTCCCAAGCATCCTATTTCCATCTCCTGAC---CGACTAATCAATAATCGCCTCGCCTCAATTCAACAATGATTAATCCAACTAACATCAAAACAAATGTTATCAATCCATAACCGTAAAGGACAGACATGAGCACTCATACTTATTTCACTTATTCTATTTATTGGATCCACTAACCTGCTAGGCCTCCTACCACACTCATTCACCCCTACCACCCAACTATCCATAAACCTAGGAATGGCTATCCCCCTATGAGCAGGAACAGTCATCACAGGTTTTCGACACAAAACAAAAGCATCCCTAGCCCACTTCCTACCCCAAGGAACACCTCTACCCCTCATTCCAATACTAGTGATCATCGAAACTATTAGCCTATTTATTCAACCCATAGCTTTAGCCGTACGACTGACGGCTAATATTACTGCAGGTCACCTACTAATTCACCTAATCGGAGGAGCTACCCTCGCCCTTATAGAC---ATTAGCACCGCCACAGCATTCATTACTTTCACTATCCTTATCCTACTCACTATCCTTGAATTTGCTGTAGCCCTCATTCAAGCCTATGTCTTCACACTGCTAGTAAGCTTATATCTACATGACAATACC +>Bison_bison_NC_012346 +------------TAATGAACGAAAATTTATTTGCCTCTTTTATTACCCCTA---TAATTTTAGGTCTCCCCCTCGTAACTCTTATCGTACTATTCCCCAGCCTACTATTCCCAACATCAA---ATCGATTAGTGAACAATCGCTTTGTAACCCTCCAACAATGAATGCTTCAACTTGTATCAAAACAAATAATGAGTATCCACAACCCCAAAGGACAAACATGAACATTAATATTAATATCTTTAATTCTATTTATTGGATCAACAAACCTATTAGGCCTGTTACCCCATTCATTCACACCAACAACACAACTATCAATAAACCTAGGCATAGCCATTCCCCTGTGAGCAGGAGCCGTAATTACAGGATTCCGCAACAAAACTAAAACATCACTTGCCCATTTCTTACCACAAGGAACACCAACTCCACTAATCCCAATACTAGTAATTATCGAAACTATTAGCCTTTTTATTCAACCCATAGCCCTCGCCGTGCGATTAACAGCCAACATCACTGCAGGACATCTATTAATTCACTTAATCGGAGGGGCTACACTTGCACTAATAA---GCATTAGCACTACAACAGCTCTAATTACATTCATCGTTCTAATCCTACTAACAGTCCTAGAATTTGCAGTAGCTATAATCCAAGCCTACGTATTCACTCTTCTAGTCAGCCTATATCTGCATGACAACA +>Lophocebus_aterrimus_NC_021954 +------------AATGAACGAAAATCTATTCACCCCATTCTCAACCCCAAC---AATCTTAGGACAACCAGCCACGATCCCCATCATCATATTTCCCACACTACTAATCCCAGCCTCTAA---ACACCTTATTGATAATCGACTAATCACTATTCAACAAAACCTCATTAAGCTTACCCTAAAACAAATAATAATACCCCACAGCGCTAAAGGACAATCTTGATCCCTAATACTAATATCCTTAATCACCTTTATCACCGTAACTAACCTTTTAGGACTCCTACCTCACTCATTCACACCGACCACCCAGCTTTCTATAAACCTAGCCATGGCAATCCCCCTGTGGGCAGGCACAATCATCGCTGGCCTCCGCTTCAAAACTAAAAGCTCCCTAGCCCACATTCTACCACAAGGTACACCTACACCCCTGATTCCCATACTAGTAGTAATCGAAACCATCAGCCTACTCATCCAACCAATAGCCCTAGCTGTACGACTAACCGCTAATATTACAGCTGGTCATCTATTAATACACCTAATCGGAAATACTATGCTAACACTATTAAC---CATCAGCCTCTCAGCCACCCTATTAACTTCTATGCTCCTAACACTATTAACCATCTTAGAAATTGCAGTTGCTCTAATCCAAGCCTACATCTTCACACTCTTGGTCAGCCTGTATCTACAAAACAACAC +>Hapalemur_griseus_NC_021950 +------------ATGAACGAAAATTTATTTGCCTCTTTCATTACCCCAACA---ATCGTAGGAATTCCTATTGTTATCCTTATCATTATAGCCCCCAGTATTATTTTCCCATCTCCTTCC---CGCCTAATTAATAATCGATTAACCTCCCTGCAACAATGACTAATTCAATTAATTCTAAAACAACTTATATCAATGCATAACCCCAAAGGACAAACTTGATCCCTTATACTAATTTCATTAATTCTATTTATTGGCTGTACCAATTTACTAGGCCTATTACCCCACTCATTTACCCCTACTACACAATTATCTATAAATTTAGGTATAGCAATCCCACTCTGAGCAGCTACAGTAATTAAAGGCTTCCGCCACAAAACAAAAGCATCCCTAGCCCATTTCCTACCGCAAGGTACACCTATTCCTTTAATTCCCATATTAGTAATTATCGAGACCATTAGCCTCTTTATTCAACCTATAGCCTTAGCTGTACGACTAACTGCTAATATCACAGCAGGTCATCTTCTCATACACTTAATTGGAGGAGCCACTTTAGCACTCACTTCA---ATTTACCTCTCTACTGCGCCGGTTACACTTATTATTCTTATTCTTCTTACAATTCTTGAATTCGCCGTTGCCTTAATTCAAGCCTATGTTTTCACTCTACTAGTTAGTCTTTACTTACACGATAATACC +>Sus_celebensis_NC_024860 +------------TAATGAACGAAAATTTATTTGCCTCTTTCATTACCCCTA---CGATAATAGGACTACCCATTGTCACCTTAATTATTATATTCCCAAGCTTACTATTCCCAACACCCA---AACGACTCATTAATAACCGCACAATCTCAGTCCAACAATGACTAATCCAACTAACATCCAAACAAATAATAGCTATTCACAACCAAAAAGGCCAAACCTGATCACTAATACTCATATCTCTAATCATATTTATCGGCTCAACAAACATCCTAGGCCTACTACCACACTCATTCACACCCACCACACAACTATCAATAAACCTGGGTATAGCAATCCCCCTATGATCAGCAACTGTATTCACAGGATTCCGCCATAAAACCAAAGCATCACTAGCCCACTTTCTACCACAAGGAACACCCGCCCCATTAATTCCTATGCTCGTAATCATTGAAACTATTAGCCTATTTATTCAACCAGTAGCCCTAGCCGTACGACTAACAGCCAACATTACAGCAGGACACCTATTAATTCATCTAATCGGAGGGGCCACATTAGCACTACTCA---ACATCAGTACTATAACAGCCTTTATCACATTTATTATCCTCATTCTATTAACTATTCTTGAATTTGCAGTAGCTCTGATCCAAGCTTATGTATTTACACTACTAGTAAGCTTATACCTACACGACAATA +>Elephas_maximus_NC_005129 +------------AGTGAACGAAGAACTATCCGCCTTCTTCGATGTACCCGT---------------AGGTACAATAATACTAGCTATTGCATTTCCAGCAATTCTACTTCCAACCCCAAA---TCGCCTAATTACCAACCGTTGAATTACAATCCAACAATGACTAATCCAATTAATCATAAAACAACTTCTGTCTATTCATAATATAAAAGGACTCTCATGATCTCTAATATTAATTACCCTAACCTTATTCATTGGTCTAACCAATCTACTAGGTCTATTACCTTATTCATTCGCCCCTACAACACAACTAACCGTAAACTTAAGCATAGCAATCCCCCTATGGACTGGTACAGTTGTCCTGGGCTTCCGGTATAAAACTAAAATCTCACTAGCCCATCTTCTCCCACAAGGAACACCTACATTCCTTATCCCTATAATCATTATTATCGAGACCATTAGTCTCCTTATTCGACCAATCACTCTAGCGGTTCGACTTACCGCCAATATTACGGCAGGTCACTTACTTATTCACTTAACCGGAAGCGCCGCACTAACTTTACTATC---GGTTCATTTAATAACAATTACAGTAACATTCATTACTGTGGTTATACTTACGATCCTGGAACTTGCCGTGGCACTAATTCAGGCCTACGTCTTCGCTCTACTAATTAGCCTCTACCTACATGAGAGTGC +>Gulo_gulo_NC_024047 +------------ATGAACGAAAATCTATTCTCCTCTTTCATTACCCCTACA---ATAATAGGACTCCCTATTGTTATTCTTATCACCATGTTCCCAGGCATTATATTCCCCTCACCGAGT---CGATTAATCAATAACCGACTCATCTCCATCCAACAATGATTAGTTCAACTAACATCAAAACAAATACTATCTGTTCACAACCAAAAGGGACAAACCTGAGCACTAATATTAATGTCCTTAATCCTATTTATTGGGTCTACCAATCTCTTAGGCCTTCTGCCCCATTCATTTACTCCCACTACCCAACTGTCTCTAAATCTAGGCATGGCCATCCCCCTGTGAGCGGGTACGGTAGTCACCGGTTTTCGATACAAAATAAAGGCATCCTTAGCCCACTTTCTACCACAAGGAACACCCCTACCTCTGATCCCAATACTTGTAATCATTGAGACCATTAGCCTTTTTATCCAGCCCATAGCCTTAGCTATTCGACTAACAGCCAACATCACCGCAGGTCACTTATTAATCCACCTGATCGGTGAAGCCACCTTGGCTTTAACAAGC---ATCAGCACCATTACCGCTATAGTAACTTTTATTATCCTTATTCTCCTAACCATCTTAGAATTTGCAGTGGCCCTTATTCAAGCTTACGTTTTTACTTTACTAGTAAGCTTATACCTACATGATAACACC +>Ursus_spelaeus_NC_011112 +------------TAATGAACGAAAATTTATTTACCTCTTTTATCACCCCAA---CGATAATGGGAATTCCTATTGTACTTTTAATTATTATATTTCCGAGCATTTTATTTCCTTCTTCCA---GTCGATTGATCGATAATCGCCTAGTATCTGTTCAACAGTGACTAGTCCGGCTAACATCAAAACAAATATTATCCATTCACAACCACAAGGGACAAACCTGAGCACTAATATTGATGTCACTAATCCTATTTATTGGCTCAACTAATCTTCTGGGTCTATTACCACACTCATTCACACCTACCACACAGCTGTCGATGAACCTAGGAATGGCTATTCCCTTGTGGGCAGGTACAGTCGCTACTGGATTCCGATACAAGACCAAAGCATCCCTGGCTCACTTTCTACCTCAAGGAACACCTTTCCCCTTAATCCCGATGCTCGTAATTATCGAAACAATCAGCCTATTTATCCAACCTATGGCCTTGGCCGTGCGATTAACCGCTAATATTACTGCAGGTCATTTACTCATCCATCTAATTGGGGGAGCTACTTTGGCCCTAACAA---GTATTAGCACTATTACAGCCTGTATCGCCTTCACCATTCTAGTGCTACTCACTATTCTCGAGTTCGCTGTAGCCCTCATCCAGGCCTACGTCTTTACCCTGCTAGTAAGTCTATACTTACACGATAACA +>Gazella_dorcas_isolate_AWWP_NC_020705 +------------ATGAACGAAAATCTATTTACCTCTTTCATTACCCCTATA---ATTCTAGGCCTCCCCCTCGTCACTCTCATTGTCTTATTCCCTAGCCTACTGTTTCCAACATCAAAC---CGACTATTAAATAATCGCCTTATCTCTCTTCAACAATGGGCACTTCAACTTGTATCAAAACAAATAATGAGCATCCACAATCCCAAAGGACAAACATGAGCACTTATACTGATATCTCTAATTCTATTCATTGGGTCAACAAACTTACTAGGCCTATTACCCCACTCTTTTACACCAACCACACAACTATCAATAAATCTAGGCATAGCTATCCCCCTATGAGCAGGAGCTGTAATCACGGGCTTCCGCAACAAGACTAAAGCATCACTTGCCCATTTCTTACCACAAGGAACACCCACCCCTCTAATTCCTATACTAGTAATTATCGAAACTATTAGCCTATTTATTCAACCAGTAGCCCTCGCAGTACGATTAACAGCCAATATTACAGCAGGACACCTATTAATTCACMTAATCGGAGGAGCCACATTGGCACTAATAAAT---ATTAGCACTACAACAGCTCTTATTACATTTATTATTTTAGTTTTACTAACAATTCTTGAATTCGCAGTAGCCATAATCCAGGCCTACGTATTTACTCTTCTAGTTAGCCTATACCTACACGATAACACA +>Moschus_berezovskii_NC_012694 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAA---TAATTCTAGGCCTTCCCCTCGCTACTCTCATTGTCATATTCCCCAGCCTATTATTCCCAACATCAA---ATCGATTAATCAACAATCGTCTCCTCTCCCTTCAACAATGAATACTTCAACTTGTATCAAAACAAATAATGGGAATTCACAACACTAAAGGACAAACATGGACACTTATACTAATATCTCTAATCCTATTTATTGGCTCAACAAATCTACTAGGCCTACTTCCCCACTCATTCACACCAACTACACAACTATCAATAAATCTAGGCATGGCTATCCCCTTATGGGCGGGCGCTGTAATTACAGGATTCCGTAACAAAACTAAAGCATCCCTTGCTCACTTCTTACCACAAGGAACACCTACTCCACTAATCCCAATGCTAGTAATTATCGAAACTATTAGCCTCTTTATTCAACCAATAGCCTTAGCAGTACGATTAACAGCCAATATTACTGCAGGACACCTGTTAATTCACCTAATTGGAGGGGCCACACTTGCACTAATAA---ATATCAGCACCACAACAGCCCTCATCACATTCATTATCCTGATCTTGCTCACAATTCTCGAATTTGCAGTAGCCATAATCCAAGCTTACGTATTTACTCTTCTAATTAGTCTATACCTGCATGATAATA +>Camelus_dromedarius_NC_009849 +------------AGTGAACGAAAATTTATTTGCCTCTTTTATTACCCCTAC---AGTAATAGGACTTCCTATTGCTATTCTCATTATTATATTCCCAAGTATACTATTCCCAGCCCCTCT---TCGACTAGTTAACAATCGTCTGATCTCTCTACAACATTGACTAATCCAACTTACATCCAAACAAATAATAACTATCCACAACCACAAGGGACAAACCTGATCCTTAATGCTAATATCTCTAATCATGTTTATTGGAACTACCAATCTCCTAGGGCTCCTCCCACATTCATTTACTCCTACCACACAATTATCGATAAATCTAGGGATAGCAATTCCTCTATGAGCCGGGACCGTAGTCACTGGTTTTCGCAATAAAACGAAAGCATCACTAGCACATTTTCTCCCCCAGGGAACGCCTACACCTCTAATCCCAATACTAGTAATCATTGAGACTATTAGCCTCTTCATTCAACCCGTAGCCCTGGCCGTTCGACTAACAGCCAATATCACAGCAGGCCACCTATTAATACATTTAATTGGAGGAGCCACTTTGGCACTAATAAG---CATCAACATGCCAACAGCCCTTATTACATTTATTGTCCTAATTTTACTTACAATCCTTGAATTTGCCGTGGCTATGATCCAAGCCTATGTATTTACCCTATTAGTAAGCCTGTATTTACATGACAATAC +>Nannospalax_judaei_isolate_ANZA_NC_020755 +------------ATGAACGAAAATCTATTTGCCTCTTTCGCTACCCCTACA---CTAATAGGCCTCCCCATTGTAATCCCAATCATTATACTCCCAACCCTATTTTTTAAAACAACAAAC---AAATTAATCAACAACCGAGTGACAACAGCCCAACAATGATTAATTAAGCTAATTACCAAACAAATAATATTTACGCACTCACCAAAAGGCCGCACATGATCCCTAATACTCACCTCACTCATCATCTTCATCGGATCCACAAACCTCCTAGGACTGCTTCCCCATACATTCACCCCAACCACACAACTCTCAATAAACTTAGGCATAGCAATCCCAATATGGGCCGGAGCTGTAATCCTAGGCTTCCGTCATAAAACAAAAGCATCACTAGCCCACTTCCTACCCCAAGGTACCCCCATTATCCTGATCCCAATATTAGTTATCATTGAAACAATTAGCCTATTCATTCAACCTATGGCACTAGCCGTACGTCTAACAGCTAACATCACAGCAGGACACCTGCTAATTCATCTAATTGGAGGCGCTACGCTAGTATTAACCACA---ATTAGCCCATCAACAGCCAGCATTACCTTCCTAATTCTTACAATACTTACTATCCTAGAACTCGCTGTAGCTATAATCCAAGCCTACGTATTTACCTTACTAGTTAGCCTATACCTACAAGACAACACA +>Ziphius_cavirostris_isolate_SWFSC_ID_z0004472_NC_021435 +------------TAATGAACGAAAATCTATTTGCCTCTTTCACAGTCCCAG---TAATACTAGGCATCCCTATTACTACCCTAATCATTATATTTCCCTCTATCTTATTCCCCACACCAA---GCCGACTAATCAATAACCGTGTAATTTCCCTCCAACAATGACTAACTAAACTCACATCAAAACAACTAATAAATACGCATACCTCTAAAGGCCAAACTTGATCCCTAATACTCATTTCGCTCCTTCTATTTATTGCTTCCACAAACCTCCTCGGAATATTACCCCACTCATTTACACCTACCACACAACTCTCAATAAACATTGGAATAGCTGTTCCCTTATGAGCTGGTACAGTTATTACAGGCTTCCGCAATAAAACAAAAATATCCCTAGCTCACCTTTTACCACAAGGCACACCTACCTTTCTTATCCCTATGTTAGTGATTATTGAAACTATTAGCCTGTTTATTCAACCAGTAGCACTAGCCGTACGACTAACTGCCAACATTACAGCAGGCCACCTATTAATACATCTAATTGGAAAAACAACCCTCGTACTAATAA---ACATTAATTTATCCGTAGCCCTCATCACATTTACAATCCTCGTCCTACTAACTATCCTTGAATTCGCTGTTGCTCTAATTCAGGCCTACGTATTTACCCTCCTAGTAAGCCTATATCTGCATGACAATA +>Echinops_telfairi_NC_002631 +------------AATGAACGAAAATCTATTTACCTCATTCTCTACCCCTAC---ATTAATAGGACTACCTATTATTATTATAATTATTGCATTCCCTGCCTTACTATACCCTACATCTAA---CCGTTTAATTAGCAACCGCATTCGAACCCTCCAACAATACCTAATTAACCTTATTCTAAAACAAATAATAGCTATCCATAGCCCTAAAGGTCGAACCTGATCACTAATACTTATATCACTTATTATTTTTATTGCATCAACAAACCTTTTAGGTCTTTTACCCCATACATTTACACCTACTACACAACTATCTATTAATTTGGGTTTAGCAATTCCACTGTGAGCAGGAGCAGTAATTTTAGGCTTTCGTTACAAATTTAAAACATCTGTGTCCCATTTTTTACCTCAAGGTACCCCAATCCTCTTAATCCCCATACTTATTATTATTGAAACTATTAGCCTATTTATTCAACCCATAGCACTAGCCGTTCGATTGACAGCTAATATTACAGCTGGGCACCTTCTCATACACCTAATTGGGGCTGCTACCCTAGCATTATTCTC---AATCAGTACCTCAACAGCCCTTATTACTTTTATTATTCTTCTACTTCTTACAATTCTAGAATTTGCTGTGGCACTGATTCAAGCCTATGTCTTCACTCTTCTAGTAAGCCTCTATCTACACGATAACAC +>Perodicticus_potto_NC_012764 +------------ATGAACCAAAACTTATTTACCTCTTTCATCACCCCCTCA---ATAGCAGGGCTTCCTATTATCACTCTCATTATCATATTTCCCAGTATTCTATTTCCCGCTCCCACA---CGACTAATCAACAATCGAATGACCTCAATACAACAATGACTAACTCAACTAGCCCTAAAACAACTGATAATCACTCACAATACAAAAGGACGAACTTGATCCCTCATGCTCATTACTCTAATAATATTCATTGGATCCACCAACCTACTAGGCCTACTTCCCCACACATTCACCCCTACTACCCAACTATCAATAAACCTTAGCATAGCTATCCCACTATGAGCAGCCACAGTACTTACAGGGTTCCGACACAAAACAAAAGCATCCCTAGCCCACTTCCTACCACAAGGAACACCTCCCCTATTAATTCCAATATTAGTATTAATCGAGACTATTAGCTTATTTATCCAACCCTTAGCCTTAGCTGTACGACTAACAGCTAATATCACAGCAGGCCACCTTCTTATACACCTAATTGGAGGAGCTACATTGGCACTCTCATCC---ATTAGCCCTACCACTGCCTTAATTACATTTATTATTCTCATTCTTCTCTCAGCCTTAGAATTAGCAGTTGCCCTAATCCAAGCATACGTATTTACCCTCTTAGTAAGCTTATACCTACATGACAACACA +>Lepus_coreanus_NC_024259 +------------TAATGAACGAAAATCTATTCTCCTCTTTTATTACCCCAA---CAATAATAGGCTTACCAATCGTAATCCTAATTATTATATTCCCAACCCTTCTATTTCCTGCCCCTA---CCCGACTGATCAACAACCGACTAGTCTCAGCCCAACAATGATTAGCCCAATTAATTCTAAAACAAATAATGATAATGCACTCCCCTAAAGGACGGACCTGATCCCTTATGCTAATCTCCCTAATTATATTTATTGGCTCAACTAACCTTCTAGGCCTCTTACCCCACTCGTTTACACCAACAACCCAATTATCAATAAATCTAGGGATAGCTATCCCACTATGAGCAGGAGCTGTAATTACAGGCTTCCGATACAAAACTAAAACGTCACTAGCTCACTTTCTCCCGCAAGGAACACCTGTGCCCCTTATTCCTATACTGGTAATTATTGAAACAATTAGCCTGTTCATTCAACCCATGGCCTTAGCTGTACGACTCACAGCCAACATTACAGCAGGCCACTTACTAATGCATCTTATCGGAGGCGCAGCACTCGCCCTAATCT---CAATTAGTCCAACAACAGCCCTAATTACTTTTATTATTCTTATTCTCCTAACAATTCTAGAATTTGCTGTAGCCCTAATTCAAGCCTACGTTTTTACCCTTCTTGTAAGCCTATATTTACACGATAACA +>Hylobates_agilis_NC_014042 +------------AATGAACGAAAATCTATTCGCTTCATTCGCTACCCCCAC---AATCCTAGGCCTACCCGCCGCAGTACCAATTATTCTATTCCCCTCCCTATTAATCCCTACTTCCAA---ATACCTCATCAACAACCGACTAATTACCACCCAACAGTGGCTAATTCAACTGACCTTAAAACAAATAATAGCAATACATAATACCAAAGGACGAACCTGGTCCCTCATACTAATCTCCCTAATTACTTTTATTGCCACAACCAACCTCCTTGGCCTCCTACCCCACTCGTTCACACCAACCACCCAACTATCCATAAACCTGGCTATAGCAATTCCCCTATGAGCAGGCACAGTAGCCACAGGCCTTCGCCTTAAAGCCAAAAATACCCTTGCCCACCTTCTACCCCAAGGCACACCCACTCCCCTCATTCCAATATTAATTATCATCGAAACCATTAGCCTATTTATCCAACCCGTAGCCCTTGCTGTACGACTAACCGCAAATATCACGGCAGGCCACCTACTAATACACTTGATTGGAGCAGCCACAATAGCCCTATCAAC---TATTAGCCCACCCATAACTCCTATCATCTTCACAGTCCTGGCTCTACTGACAATCCTCGAAATTGCCGTAGCTCTAATTCAAGCATACGTCTTCACACTCCTGGTGAGCCTCTACCTGCACGACAATAC +>Galeopterus_variegatus_NC_004031 +------------ATGAACGAAAATCTATTTAACTCATTCACAACCCCAACA---TTAATAGGTCTACCTATCGTAGCCCTTATCATCTTTTTACCTAATATAATATATCCCTCCCCCTCC---CGCCTCATCAATAACCGCTTAACATCTCTGCAAATATGACTAGTTCAACTTATCCTAAAACAACTAATAACAGTACACAATATCAAAGGACGATCATGATCCCTAATACTAATTTCACTAATCCTATTTATTGGCTCAACAAATCTACTAGGACTATTACCCCACTCATTTACACCTACCTCCCAATTATCACTAAACCTAGGTATAGCAATCCCCCTATGAGCCGGAACAGTAATCCTAGGCCTTCGCAACAAAATAAAAAAATCCCTGGCTCACCTTCTACCCCAAGGCACACCCACCCCCCTTATCCCAATACTTGTAATTATTGAAACCATCAGTCTCTTCATTCAACCCTTAGCCTTGGCCGTACGATTAACAGCTAACATTACAGCAGGCCACCTGCTCATGCACCTTACTGGAAACGCCACATCTACATTAATCACC---CTAAGCCCCCCAACAACTCCAACTATCTTTACCCTTCTTGTCCTACTCACCATGCTTGAACTCACCGTAGCCCTAATCCAAGCCTACGTATTTACCCTCCTAGTAAGCCTCTACCTGCATGACAACACC +>Aepyceros_melampus_isolate_PhC20_NC_020675 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCCA---TATTATTAGGCCTCCCCCTTGTTACTCTGATTGTCTTATTTCCTAGCTTACTATTTCCAACATCAA---ACCGACTAATTAATAACCGCCTCATTTCCCTCCAACAATGAATACTCCAACTTGTATCAAAACAAATAATAAGTATTCACAACCCAAAAGGACAAACATGAGCACTAATACTAATATCCTTAATTATATTTATTGGCTCAACAAATCTACTAGGCTTATTACCCCACTCATTTACACCAACCACACAATTATCAATAAACCTAGGCATAGCAATCCCCCTATGAGCAGGAGCTGTAATTATAGGCTTCCGCAACAAGACCAAAATATCACTCGCCCATTTATTACCACAAGGCACACCAACCGCACTAATCCCAATATTAATTATCATCGAAACTATCAGCCTCTTTATCCAACCAATAGCCCTTGCAGTACGACTCACAGCAAACATCACTGCAGGACATCTGCTAATTCACCTAATTGGAGGAGCCACACTCGCACTAATAA---ATATTAGCACTACAACAGCTCTCATTACATTCATTATTTTAATCCTATTAACAATTCTTGAATTTGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTCTTAGTAAGCCTGTACCTGCATGACAACA +>Mesocricetus_auratus_NC_013276 +------------AATGAACGAAAATCTTTTCGCCTCTTTCATTACCCCTAC---AATAATAGGTCTACCTGTTGTAATTATTATTATTATACTCCCATCCATAATACTAACATCTTCTAA---CCGTCTCTTAAGCAACCGCTTCCATACATTTCAACAATGAGTAGTTAAAATAATTACCAAACAAATAATATCAATTCATTCGCCAAAAGGACAGACTTGATGCCTAATACTAGTTTCCCTAATTATCTTTATTGGCTCAACAAACCTCTTAGGCTTATTACCTCATACCTTCACCCCAACAACCCAACTATCAATAAATCTAGGAATAGCAATTCCACTATGAGCAGGAACAGTTTTCCTCGGATTTCGCCACAAAATAAAAAGCACATTAGCCCATTTCCTACCGCAAGGAACACCTATTCCTCTTATTCCTATACTCATTATTATTGAAACAATCAGCCTATTTATTCAACCCATAGCCCTTGCAGTTCGACTAACAGCCAATATTACTGCAGGACATTTACTCATACATCTTATCGGAGGGGCAACCCTAGTTTTAACCTC---TATCAGTCCCCCAACAGCTATAATTACATTTATCATTCTTGTACTCCTAACTATTCTAGAATTTGCTGTTGCCCTAATTCAAGCATATGTGTTTACTCTACTAGTAAGCTTATATCTACATGATAATAC +>Macaca_tonkeana_NC_025222 +------------ATGAACGAAAACTTGTTTGCCCCATTCTCAAGCCCAACA---ATTCTAAACCAACCCGCCACAATCCCCATCATCCTATTCCCCACCCTACTAGTCTTAACCTCTAAA---CACCCCATTAACAATCGACTAATCACCATTCAACAAAACCTGACTCAACTAGCCCTAAAACAAATGATAGTAACTCATAATGCTAAAGGACTAACCTGGTCCCTAATACTAATATCCCTAATTACCTTCATCACTATAACGAACCTCTTAGGGCTCCTGCCCCACTCATTCACACCAACCACCCAGCTTTCCATAAACCTAGCCATAGCAATCCCTCTATGAGCAGGCACAGTAGTCATAGGACTTCGCTTTAAAACCAAAGATTCCCTAGCCCACCTTCTACCGCAAGGTACACCCACACCTCTCATTCCTATGTTGGTGATAATCGAAACTATTAGCCTACTTATCCAACCGGTAGCCCTAGCCGTACGACTAACTGCAAACATCACAGCTGGCCACCTACTAATACACTTGATTGGAAACGCTGTGTTAGCACTATCAACC---ACTAACTTCTTCATAACTCTGCCAACCTCCATACTCCTAATACTATTAACCATCCTAGAAATTGCAGTAGCCCTAATCCAAGCCTATGTCTTCACACTCCTAGTTAGTCTTTACCTGCATAACAACACC +>Ovis_vignei_breed_Urial_NC_026064 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTA---TAATATTTGGCCTCCCCCTCGTTACCCTCATTGTTTTATTCCCTAGCCTACTATTTCCTACATCAA---ACCGACTAGTTAGCAACCGCCTCATCTCCCTCCAACAGTGAATACTTCAATTAGTATCAAAACAAATAATGAGCATTCATAACACCAAAGGACAGACATGAGCATTAATGCTAATGTCCCTAATTTTATTTATTGGATCTACAAACCTACTAGGCCTCCTACCCCACTCATTTACACCAACTACACAACTATCAATAAATCTAGGCATGGCCATTCCTTTATGAGCAGGAGCTGTAATTACAGGCTTCCGCAACAAAACTAAAGCTTCACTCGCCCACTTCCTACCACAAGGGACACCCACCCCACTGATCCCAATACTAGTAATTATTGAAACCATCAGCCTATTTATTCAACCAGTAGCCCTTGCCGTACGATTAACAGCTAACATCACGGCAGGACACCTACTAATTCACCTAATTGGAGGAGCCACCCTTGCACTAATAA---GCATTAATACCACAACAGCACTCATCACATTTATTATTCTAATTTTACTAACAATCCTCGAGTTCGCAGTAGCTATAATTCAAGCCTATGTATTTACCCTTCTAGTTAGCTTATACCTGCATGATAACA +>Rattus_exulans_NC_012389 +------------CAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAA---CAATAATAGGTTTACCAATCGTCGTAACCATTATTATATTTCCATCAATTCTGTTTCCATCATCAG---AACGCCTAATTAGCAACCGCCTCCACTCATTCCAACACTGACTAATTAAACTTATCATTAAACAAATAATACTAATTCACACACCAAAAGGACGAACTTGAGCACTAATAATTGTATCACTAATTATATTTATTGGCTCAACTAACCTTCTAGGCCTACTTCCCCATACATTTACCCCTACCACTCAACTATCTATAAATCTAAGTATAGCAATCCCCCTATGAGCAGGAGCCGTAATCTTAGGATTCCGACACAAACTAAAAAGTTCTTTAGCCCACTTCCTACCACAAGGAACACCCATTTCACTTATTCCCATACTAATTATTATCGAAACTATTAGCCTATTTATTCAACCTATAGCACTCGCAGTACGACTAACAGCTAACATCACAGCAGGCCATCTATTAATACACCTAATCGGAGGGGCTACCCTAGTGCTCATAG---ACATTAGCCCACCTACCGCCACAATTACATTTATCATTCTACTTCTACTTACAATACTTGAATTTGCTGTAGCCTTAATTCAAGCCTACGTCTTTACCCTTCTAGTAAGCCTGTATCTACATGATAACA +>Tachyglossus_aculeatus_NC_003321 +------------AATGAACGAAAATCTATTTGCCTCATTCATCACTCCTAC---AATCCTAGGTATTTCAATTCTCCCACTTATCATAATCTTCCCATGTCTTTTATTTTCAGCCCCCAA---CCGTTGGATACCTAATCGTCTAGTTGCCCTTCAACTCTGATTAGTTCGCATAGTTACTAAGCAAATGATGTCAATACATAATAAACAAGGTCGAATATGAACACTAATACTAATCACCCTAATCATATTTATTGCTTCAACAAACCTTCTTGGATTACTACCCTACACATTCACCCCTACAACCCAACTATCAATAAACATGGGAATGGCAGTCCCCCTATGACTAGGCACAGTCCTTATGGGATTTCGCAATAAACCTAAATCCTCACTAGCCCATTTCTTACCCCAAGGAACCCCTACCCCCCTGATTCCTATATTAATTATTATCGAAACTATCAGTTTATTTATTCAACCAGTAGCACTCGCAGTACGGCTTACTGCTAACATTACAGCAGGACATCTCTTAATCCACCTCATCGGATCAGCTACACTAGCCCTATCATC---CATCAGTCTTACAGTATCAACAATCACGTTCACCATTCTTTTCCTCCTCACAATTCTAGAAATCGCTGTAGCTCTAATCCAGGCGTATGTTTTCACACTACTAGTTAGTCTTTATCTACATGATAACAC +>Nandinia_binotata_isolate_GLC8_NC_024567 +------------ATGAACGAAAATCTATTCTCCTCTTTCATTACCCCAACA---ATAATAGGATTACCCATCGTAGTACTAATTATTATATTTCCCAGCATCTTATTTCCCTCACCCACC---CGACTAATCAATAATCGCCTAATTTCCCTACAACAATGATTGGTCCAACTAACATCAAAACAAATATTAGCCATTCATAATCACAAAGGACAAACCTGAGCCCTAATACTAATATCCCTAATCCTATTCATTGGCTCAACAAACCTACTAGGACTATTACCACACTCATTCACACCTACTACACAACTATCAATAAACCTAGGAATAGCTATTCCCTTATGAGCAGGAACCGTAACAACCGGCTTCCGCCACAAAACAAAGGCATCCCTAGCCCACTTTCTACCCCAAGGAACCCCTATCCTCCTCATTCCTATACTCGTAATCATTGAAACTATTAGTCTCTTTATTCAACCAATAGCCTTAGCCGTACGACTCACAGCCAATATTACTGCTGGTCACCTATTAATTCACCTAATCGGAGGGGCTACCCTGGCTCTAATGAAC---ATCAGCACCTCTGTCGCCTCAATTACTTTTATTATTCTCACCCTACTAACTATTCTCGAATTCGCCGTAGCCCTAATCCAAGCCTACGTATTTACCCTACTAGTAAGCCTATACCTACATGACAATACC +>Acinonyx_jubatus_NC_005212 +------------TAATGAACGAAAATCTATTCGCCTCTTTCATTACCCCAA---CAATAATAGGACTGCCTATTGTTATATTAATCATTATATTCCCAAGTATTCTATTTCCATCGCCCA---ACCGACTGATTAATAACCGCCTAATCTCACTGCAACAATGACTAGTACAACTAACATCAAAGCAAATATTGGCCATTCATAACTACAAAGGACAGACCTGAGCTCTAATACTGATGTCCCTTATCCTATTTATTGGATCAACAAACCTACTAGGCCTATTACCCCACTCATTTACTCCAACCACCCAATTATCAATAAACCTAGGAATAGCTATCCCACTATGAGCCGGTACTGTAATTACCGGGTTTCGCCATAAAACTAAAGCATCCCTAGCTCACTTCTTACCACAAGGAACACCCATTCCCCTAATTCCTATGCTTGTAGTTATCGAAACTATTAGTCTCTTTATTCAACCTATAGCCTTAGCCGTACGACTTACAGCTAACATTACTGCAGGTCACTTACTAATACACCTAATTGGAGGGGCCACTCTAGCCTTAACAA---ACATTACTGTCCCTGCTGCTTTAATTACTTTCATTATTCTTATTCTACTAACAATCCTTGAGTTTGCTGTAGCCCTAATCCAAGCCTATGTCTTCACCCTACTAGTAAGCCTATATTTACATGATAACA +>Pusa_caspica_NC_008431 +------------AATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCTAC---AATAATAGGTCTTCCTATCGTAGTCCTAATTGTCTTATTCCCAAGCATCCTATTTCCATCTCCTGA---CCGACTAATCAATAATCGCCTCACCTCAATTCAACAGTGGCTAATCCAATTAACGTCAAAACAAATGTTGTCAATCCATAACCATAAAGGACAGACATGAGCACTTATACTTATTTCACTTATTCTATTTATTGGATCCACTAACCTGCTAGGCCTCCTACCACACTCATTCACCCCTACCACCCAACTATCCATAAACCTAGGAATGGCTATCCCCCTATGAGCAGGAACAGTCATCACAGGTTTTCGACACAAAACAAAAGCATCCCTAGCCCACTTCCTACCCCAAGGAACACCTCTACCCCTCATTCCGATGCTAGTGATCATCGAAACTATTAGCCTATTCATTCAACCCATAGCCTTAGCCGTACGACTAACGGCCAATATTACTGCAGGTCACCTACTAATCCACCTAATCGGAGGAGCTACCCTCGCCCTTATAGA---CATTAGCACCACTACAGCATTCATTACTTTCATCATCCTTATCCTGCTTACTATCCTTGAATTTGCCGTAGCCCTCATTCAAGCCTATGTCTTCACACTGCTAGTAAGCCTATATCTACATGACAATAC +>Capra_sibirica_NC_020626 +------------ATGAACGAAAATCTATTTACCTCTTTCATTACCCCTATA---ATTCTAGGCCTCCCTCTTGTCACCCTTATTATTTTATTTCCTAGCTTACTATTCCCCACAYCAAGC---CGACTAATTAACAACCGCCTCATCTCTCTCCAGCAATGGGCACTCCAACTTGTATCAAAACAAATAATAAGTATTCATAATACCAAAGGACAAACATGAACATTAATATTAATATCCCTAATCCTATTTATTGGATCTACAAACCTATTAGGCCTTTTACCCCACTCATTCACACCAACTACACAACTATCAATAAACCTAGGCATRGCTATTCCCTTATGAGCAGGAGCCGTAATCACAGGCTTTCGCAACAAAACTAAAGCATCACTTGCCCATTTCCTACCACAAGGAACACCCRCCCTACTAATCCCAATGCTAGTAATTATTGAAACCATTAGCCTCTTTATCCAGCCAGTAGCCCTTGCCGTACGACTGACAGCCAACATCACAGCAGGACACTTATTAATTCACTTAATTGGAGGAGCCACCCTTGCACTAACAAGC---ATTAGTGCCACAACAGCACTCATAACATTTATTATTCTAATTCTACTAACAATTCTCGAATTCGCAGTAGCTATAATCCAAGCCTACGTATTTACTCTCCTAGTTAGCCTATATCTGCATGATARCACA +>Callithrix_pygmaea_NC_021942 +------------TAATGAACCAAAATTTATTCGCCTCCTTCGACATCCCGA---TAATCCTAGGAGTCCCCCTAGTGATTTTAATCATTATATTTCCCGCCACATTAATTACACCCAACA---ATAACCTAATTAACAACCGTTACTCCTCTCTTCAACAATGACTAATTCAACTCGTACTAAAACAAATGATAATCTCCCATTCAACTAAAGGACGAACTTGATCCCTCATACTTACAGCCCTAATTACATTTATCGCTTTAAATAATCTCCTCGGACTCACACCCTATGCATTCACACCAACCACCCAATTATCAATAAATCTAGGTATAGCAATTCCCCTATGAGCAGCAACTGTACTCATAGGGTTGCGATTCAAAACAAAATCAACTCTCGCCCACTTCCTACCACAAGGAACACCTGTCCCACTAATCCCCATACTAATTATTATCGAAACAATCAGCCTATTTATTCAACCAGTAGCTCTAGCTGTACGACTTACAGCTAACATCACAGCAGGTCACCTGTTAATACATCTACTTGGTGACACTACACTAACTCTCATAT---CCATCTATCTATCCTCCTCCACAATTACTATTATCATCATTATTCTACTCATCACCCTAGAACTGGGTGTGGCACTCATCCAAGCATATGTATTCACACTTTTAGTTAGCCTATACCTACATGACAACT +>Mazama_americana_isolate_MAZ9472_NC_020719 +------------AATGAACGAAAATCTATTTGCCTCTTTTATTACCCCAAT---AATTCTAGGCCTTCCACTCGCTACCCTTATCGTTATTTTTCCTAGCCTACTATTCCCAACATCAAA---TCGCCTAATAAATAATCGTCTTATTTCTCTCCAACAATGATTACTTCAACTCATATCAAAACAAATAATAGGAATTCACAATACTAAAGGACAGACATGAACATTAATATTAATATCCCTAATTATCTTTATTGGATCAACTAATCTCTTGGGCCTATTACCTCACTCATTTACACCAACCACACAACTGTCAATGAACTTAGGAATAGCTATCCCCCTATGAGCAGGAACCGTAACCATAGGTTTCCGCAACAAAACCAAAGCATCACTTGCCCATTTTCTTCCACAAGGAACACCTACTCCATTAATCCCCATATTAGTTATCATTGAAACTATTAGCCTTTTTATTCAACCAATTGCCCTAGCTGTGCGATTGACAGCTAATATCACCGCAGGACATCTGCTAATTCACCTAATCGGAGGGGCCACACTCGCATTAATGAG---TATTAGCACTGCAATAGCCCTCACTACATTTATTATTCTAGTTCTGCTCACAGTTCTCGAATTTGCAGTGGCCATGATTCAGGCCTATGTATTTACCCTTCTAGTAAGCCTCTACCTGCATGACAACAC +>Neomys_fodiens_NC_025559 +------------ATGAACGAAAATTTATTCGCCTCTTTCGCTACCCCAACA---ATAATAGGATTTCCTATCGTAATCTTAATCATTATATTCCCTAGCATTATATTCCCAACTCCTAAC---CGACTTATTAATAACCGCCTAGTAGCTATTCAACAATGACTAATTCAATTAATCTCCAAACAAATAATAGCAATCCACAATCAAAAAGGACAAACATGAACTCTTATACTCATCTCACTTATTCTCTTTATTGGCTCGACCAATCTTCTAGGCTTACTACCCCACTCATTTACACCAACAACTCAACTATCAATAAACCTAGGCATGGCTATCCCACTTTGAGCTGGAACTGTGATTTCAGGCTTCCGACACAAAACTAAAGCTTCACTAGCCCATTTCCTTCCTCAAGGAACCCCTCTTCCACTCATCCCAATACTTATTATTATCGAGACAATCAGTCTATTCATCCAACCTATAGCTCTCGCTGTACGATTAACAGCAAATATTACTGCCGGTCATCTACTAATTCACCTCATCGGAGAAGCAACCCTTGTTCTCATGAGT---ATTAGCCCTGCTACAGCATTCATTACCTTTATTATCCTTGTAATATTAACTATTCTCGAATTCGCTGTAGCATTAATTCAGGCATACGTATTTACTCTCCTAGTTAGCCTGTACCTGCATGATAATACA +>Mustela_nigripes_NC_024942 +------------TAATGAACGAAAATCTATTTTCCTCATTCACTACCCCTA---CAATAATAGGATTGCCTATCGTTATCCTCATCACCATATTCCCAGGTATTATATTCCCCTCACCCA---ACCGACTGATTAACAACCGACTCATTTCTATCCAACAATGATTGGTTCAATTAACATCAAAACAAATGCTATCCATTCACAACCAAAAAGGACAAACTTGAGCATTAATACTAATATCCCTAATCCTATTTATTGGGTCTACTAACCTGCTAGGTCTCTTACCTCACTCATTTACCCCTACCACACAACTGTCCCTGAACCTAGGAATAGCTATCCCCCTATGAGCAGGCACAGTAATTACTGGATTTCGACACAAAACAAAAGCCTCTTTAGCCCACTTTCTACCACAAGGAACCCCACTACCCCTAATCCCCATGCTCATCATCATCGAAACTATCAGCCTATTTATTCAACCCATGGCCCTGGCCGTGCGACTAACAGCTAACATCACAGCGGGCCACCTATTAATTCACCTAATTGGAGGAGCCACCCTAGCCCTAATAA---ACATTAGTACCGTTACAGCAATAATTACCTTTTCTATCCTTGTCCTATTAACTATCTTAGAGTTTGCAGTAGCCCTTATTCAAGCCTACGTCTTTACCCTACTAGTAAGTCTATATTTACATGACAACA +>Saimiri_oerstedii_citrinellus_NC_023211 +------------AATGACCCAAAACCTATTCACCATCTTTAATATCCCAGT---AGTCCTAGGAATACCCCTAACAGTACTAATTATTATATTTCCCTCCATACTAATCTTACCCCCTAA---CAATACTATCAACAACCGATTCTCATCCATTCAACAATGACTAATCCAGCTCACACTAAAACAAATAATAATCACCCATTCCACTACAGGACGAACCTGATCTCTAATGCTCCTAACCCTAATTACCTTTATTTCCTTAAATAACCTTCTCGGACTCACACCCTACGCATTTACACCCACCACTCAACTATCAATAAATATTGGTATAGCAATCCCACTATGAATAGCAACCGTACTTATAGGACTTCGACTTAAAATAAAAACATCCCTTGCCCATCTTCTGCCCCAAGGAACACCAACTCTACTCATTCCAATGCTCATCATCATTGAAACCATTAGCCTCTTTATTCAACCAGTAGCACTAGCAGTACGACTAACAGCAAACATTACAGCAGGTCACCTACTAATGCACCTATTAGGGACTGCTTCACTGACCCTTCTATC---TATTTACCTCTCCTCCTCTTTAGTTACTATCATCGTCATTATCTTACTAATTACCCTAGAATTAGGCGTAGCCCTAATCCAAGCTTACGTCTTTACACTTCTAGTCAGTCTTTACCTGCACAATAATTC +>Mus_terricolor_NC_010650 +------------ATGAACGAAAATCTATTTGCCTCATTCATTACCCCAACA---ATAATAGGTCTACCTATCGTAGTAGCTATCATTATATTCCCATCCATCTTATTTCCTTCCTCAAAA---CGCTTAATCAACAACCGACTTCACTCTTTCCAACACTGACTAATTAAACTCATTATTAAACAAATAATATTAATTCACACCCCAAAAGGACGAACGTGAACCCTAATAATTGTGTCCCTAATTATATTTATTGGTTCCACAAATCTCCTAGGCCTCTTACCCCATACATTTACCCCCACTACACAACTATCCATAAACTTAAGTATAGCTATCCCACTATGAGCTGGAGCTGTTATTACAGGTTTTCGGCACAAACTAAAAAGTTCCCTTGCCCATTTCCTTCCACAAGGAACTCCAATCTCATTAATCCCAATACTTATCATTATCGAAACAATTAGCCTATTCATTCAACCCATAGCTTTAGCAGTCCGACTAACAGCCAACATTACTGCAGGCCACTTATTAATACACCTAATTGGAGGGGCTACCCTAGTACTAATAAGC---ATTAGCCCACCAACAGCTACCATTACATTTATTATTCTGCTACTTCTAACAGTCTTAGAATTTGCAGTTGCACTAATTCAAGCCTACGTATTTACTCTCCTAGTAAGCCTATATTTACACGACAATACA +>Avahi_laniger_NC_021940 +------------TAATGAACGAAAATCTATTTGCCTCTTTCGCTACCCCAA---TAATTATAGGATTCCCGATCGTAATTCTAATTATTGCTCTTCCCAGCATCCTATTCCCTTCACCTA---CCCGTCTCATCGCCAACCGACTAACCTCCCTGCAACAATGGTTAATTCGGCTAACATTAAAACAACTAATAACAATGCACAACGTCAAGGGACGAACTTGATCCCTCATACTAACCTCACTGATCTTATTTATTGGCTCGACTAATTTACTGGGCCTATTACCCCACTCATTCACCCCTACTACCCAACTCTCAATAAACCTAGGCATAGCAATCCCCCTATGAGCTGCCGCAGTCATAACGGGATTTCGCCACAAAACAAAAATATCCTTTGCCCATCTATTACCGCAGGGAACACCCATCCTCCTTATCCCTATACTAGTAATTATCGAGACTATCAGCCTTTTCATCCAACCTATAGCACTAGCCGTTCGACTAACAGCCAACATCACAGCGGGCCACTTACTCATACATTTAATTGGAGGAGCCACTTTAACCTTAACCT---CAGTCGGTCCCACTACGGCCTCAATCACGTTCACCATCCTTGTGCTCCTTACAATTCTCGAATTCGCCGTAGCCCTAATTCAAGCCTACGTCTTTACCTTATTAGTTAGCCTCTATTTACATGACAACA +>Myotis_davidii_NC_025568 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAAC---GATAATAGGCCTACCTATTGTCGTACTTATTATTATATTCCCAAGTATATTATTCCCATCAACAGC---ACGACTAGTTAACAACCGTCTAGTTTCAATTCAACAGTGATTAATTCGCATTACAGCGAAACAAATAATAACCATTCACAACAAAAAAGGACAGACTTGAACACTTATATTAATATCACTTATTATATTTATTGGTTCAACAAATCTATTGGGTCTCTTGCCTCACTCTTTTACCCCTACCACACAACTATCAATAAACTTAGGTATAGCCATTCCTCTCTGAGCCGGTACAGTTATTTTAGGCTTTCGCCATAAAACAAAAGCATCTCTAGCACATTTTTTACCTCAAGGAACACCTCTACCTCTGATTCCTATACTAGTTATTATCGAAACAATTAGCCTATTTATTCAACCAATGGCATTAGCAGTACGACTAACAGCAAACATTACTGCAGGACATCTACTCATTCACCTGATTGGGGGAGCCACTCTAGCACTAATAAG---TATCAGCATAACTACTGCTTTCATTACATTTGTTATTCTAGTCCTACTAACAGTATTAGAATTCGCTGTCGCCCTAATTCAAGCATATGTTTTTACCCTATTAGTAAGTCTTTATTTACACGATAACGC +>Gazella_leptoceros_isolate_CYTO_NC_020708 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTATA---ATTCTAGGCCTTCCCCTCGTTACCCTCATTGTCCTATTCCCTAGCCTATTATTTCCAACATCAAAC---CGACTAATAAATAACCGTCTTATCTCTCTTCAACAATGAGTACTTCAACTTGTATCAAAACAAATAATAAGCATCCACAACCCCAAGGGGCAAACATGAGCACTTATACTGATATCCTTAATTATATTTATTGGGTCAACAAACTTACTAGGCCTACTACCCCACTCTTTTACACCAACCACACAACTATCAATAAACCTAGGTATAGCCATTCCCCTATGAGCAGGAGCTGTAATCACGGGCTTCCGCAACAAAACTAAAGCATCACTTGCCCACTTTTTACCACAAGGAACACCCACCCCTCTAATCCCTATACTAGTAATTATCGAAACTATTAGCCTATTTATTCAACCAGTAGCCCTCGCAGTACGACTAACAGCCAATATTACAGCAGGACACCTATTAATTCACCTAATTGGAGGGGCTACATTAGCACTAATAAAT---ATTAGCACTACAACGGCTCTTATTACATTTATTATTCTAGTTTTACTAACAATTCTTGAATTCGCAGTAGCTATAATTCAAGCCTACGTATTTACTCTTTTAGTCAGCCTATACTTACACGATAACACA +>Propithecus_diadema_isolate_ANJZ5_NC_026084 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAA---CAATTGTAGGAATCCCTATTGTGATTCTAATCATCGCAATCCCTAGCATTCTCTTCCCTTCACCCA---CCCGTCTCATTTCCAACCGATTGACTTCCTTACAACAATGACTCATTCAACTAGTACTAAAACAACTAATAATGATACACAGCATTAAAGGACGAACTTGGTCTCTTATACTAATTTCACTAATCCTATTTATTGGATCAACCAACTTACTAGGCCTATTACCCCACTCATTCACCCCTACTACTCAACTATCAATGAATCTAGGCATAGCCATCCCACTATGAGCTGCTGCAGTCATTACAGGCTTTCGTCATAAAACAAAAATATCCTTAGCTCACCTACTACCACAAGGAACACCAGTCCCTCTTATCCCCATACTAGTAATCATCGAAACCATTAGCCTTTTCATTCAACCTATAGCATTAGCCGTACGATTGACAGCTAACATTACAGCAGGTCACCTACTCATACACTTAATTGGTGGAGCCACCTTAGTATTAACCT---CAATTAGTCCCACCACTGCCTCAATTACATTTACTATTCTTATTCTCCTTACAATCCTTGAACTTGCCGTCGCCCTAATCCAAGCCTATGTATTTACTTTACTAGTTAGCCTTTATTTACATGACAACA +>Rattus_rattus_NC_012374 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAAC---AGTAATAGGTCTACCAATTGTCGTAACCATCATCATATTTCCATCAATTTTGTTCCCATCATCAGA---ACGCCTTATTAGCAACCGCCTCCACACATTTCAACACTGACTAATTAAGCTTATTCTCAAACAAATAATGTTAATTCATACACCAAAAGGACGAACCTGAGCACTAATAATCGTATCACTAATTATATTTATTGGCTCAACTAACCTTTTAGGCTTGCTTCCCCACACATTTACTCCCACTACTCAACTATCTATAAATCTAAGCATAGCTATTCCTCTATGAGCAGGAGCCGTAATCTTAGGTTTCCGGCATAAGTTAAAAAGTTCTTTAGCCCACTTCTTACCTCAAGGAACGCCCATTTCACTCATTCCCATACTAATTATTATCGAAACTATCAGCCTTTTCATCCAACCAATAGCACTAGCAGTACGACTAACAGCAAATATCACAGCAGGCCACCTATTAATGCACCTAATCGGAGGAGCCGCCCTAGTTCTCATAAA---CATTAGCCCACCAACCGCTACAATCACATTTATTATCCTTCTCCTACTTACAATACTTGAATTCGCTGTAGCTTTAATTCAAGCTTACGTATTCACTCTTCTAGTAAGCCTATATCTACATGATAATAC +>Artibeus_lituratus_NC_016871 +------------ATGAACGAAAATTTATTCGCCTCTTTCATTACCCCTACG---ATAATAGGTCTCCCTATTGTTATCCTAATTATTATATTCCCCACTATTATATTCCCATCAACTAAT---CGATTAGTCAACAACCGGTTAGTAGCAATTCAACAATGACTAGTTTACTTAACTTCCAAACAAATGCTCTCTATCCATAATCGTAAAGGCCAAACATGAGCCCTAATACTAATATCTCTTATTTTATTTATCGGCTGCACAAATCTGCTAGGCCTACTACCACACTCTTTCACTCCAACAACACAACTGTCAATAAACCTAGGTATAGCTATTCCCTTATGAGCCGGAACAGTAATTCTAGGATTTCGACACAAAACCAAAGCCTCCCTAGCACATTTTCTCCCACAAGGAACTCCCTTACCACTAATTCCAATATTAATTATTATCGAAACTATTAGCTTATTTATTCAACCTATAGCATTAGCCGTACGACTTACTGCTAATATTACTGCTGGCCACTTACTAATTCACTTAATTGGCGGTGCCACTCTAGCTCTTATGAAT---ATCAGCACAGCCACCGCTCTTATTACATTTATAATTCTAGTTCTACTAACCATCCTAGAATTTGCTGTAGCTCTAATCCAAGCCTATGTCTTTACTTTACTAGTTAGTCTGTACCTACATGATAATGCT +>Balaenoptera_borealis_NC_006929 +------------TAATGAACGAAAATTTATTTGCCCCTTTTATAATCCCAA---TAATACTAGGTATTCCTATTACCACTCTAATCATTATTCTTCCATCTGTCTTATTTCCTACACCAA---ATCGTCTAATCAACAATCGTACGATCTCCATTCAACAATGATTAACCAAGCTCACATCAAAACAACTAATAAATGTACACAGTCCTAAAGGACAAACTTGATCCCTAATACTCATTTCACTGTTCCTATTTATTGCCTCCACTAATCTCCTTGGAATATTACCCCACTCATTTACACCCACCACACAACTCTCAATGAACATAGGAATGGCTATTCCCCTATGGGCTGGTACCGTTGCCACAGGTTTTCGCAACAAAACAAAAATATCCTTAGCCCACTTACTACCACAAGGCACACCCACCTTTCTTATTCCTATGTTAGTAATCATTGAAACCATCAGTCTATTTATTCAACCAGTAGCACTAGCCGTACGACTAACTGCCAACATCACAGCAGGTCACTTACTAATACATCTGATCGGAGAGACAACCCTTGTACTAATAA---ACACCAGCCCATTTACAGCCCTTATCACTTTCACTATCCTTGCTCTATTAACCATTCTTGAATTTGCTGTCGCCCTTATTCAAGCTTACGTCTTTACTCTTTTAGTAAGCCTATACCTTCACGATAATA +>Mus_cookii_isolate_R5155_NC_025270 +------------AATGAACGAAAATCTATTTGCCTCATTCATTACCCCAAC---AATAATAGGTCTACCAATTGTTGTTACTATTATTATATTTCCATCTATCTTATTTCCATCCTCAAA---ACGCCTAATTAACAACCGACTCTACTCCTTCCAACACTGACTAATCAAACTTATTATCAAACAAATAATACTAATTCACACCCCAAAAGGACGAACATGAGCACTAATAATTGTCTCTCTCATTATATTTATTGGATCCACAAACCTTTTAGGACTGTTACCTCATACATTCACACCTACCACCCAACTATCAATAAACCTAAGCATGGCAATTCCACTATGAGCTGGAGCCGTAATTATGGGCTTCCGACATAAACTAAAAAGCTCACTCGCCCACTTCCTCCCTCAAGGCACTCCTATTACACTAATTCCAATGCTTATTATTATTGAAACAATTAGCCTATTTATTCAACCCATAGCACTAGCAGTTCGACTTACAGCTAACATCACTGCAGGTCACCTGTTAATACACCTAATTGGAGGAGCCACTCTAGTACTAATAAA---TATTAGCCCCCCAACAGCTACAATTACATTTATTATCCTTCTACTGCTTACAGTACTAGAATTTGCAGTAGCATTAATTCAAGCCTATGTATTTACCCTCCTAGTAAGCCTATATTTACATGATAATAC +>Blarinella_quadraticauda_NC_023950 +------------ATGAACGAAAATTTATTCGCCTCTTTCGCTACCCCAACA---ATAATAGGTCTTCCTATTGTTATTTTAATTATTTTATTTCCCAGCATTATATTTCCAGCTCCTAAT---CGATTAATTAATAACCGATTAGTTGCCCTTCAACAATGATTAATTCAATTAACATCCAAACAAATAATGGCAATTCATAACCAAAAGGGACAAACATGAACCCTAATACTAATTTCCCTTATCCTTTTCATCGGATCTACTAACTTACTAGGATTATTACCACATTCATTTACACCTACAACTCAACTCTCAATAAATTTAGGTATAGCTATCCCTCTTTGAGCCGGAACTGTAATTACTGGATTTCGCCATAAAACAAAAGCATCTCTAGCTCATTTTCTTCCTCAAGGAACACCTTTACCATTAATTCCTATACTAATTATTATCGAAACTATCAGTTTATTTATTCAACCCATAGCCCTTGCTGTCCGATTGACAGCAAATATTACAGCAGGACATTTATTAATTCATCTAATCGGAGGAGCTACCCTTGTATTAATAAGC---ATTAACCCAGTTACAGCTTTCATTACTTTCATCATCCTAGTAATACTTACAGTACTAGAATTTGCTGTAGCCTTAATTCAAGCCTACGTCTTCACCCTTTTAGTAAGTCTTTATCTGCACGATAACACA +>Crocidura_shantungensis_NC_021398 +------------TAATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCAA---CAATAATAGGCCTTCCTATTGTTATTTTAATTATTTTATTTCCTAGTATTTTATTCCCTACCCCTA---ACCGACTTATTACAAATCGATTAACTGCTCTCCAACAATGATTTATCCAACTAGTATCTAAACAAATAATAATAATTCATAATCAAAAAGGACAGACATGAACACTCATATTAATATCTCTAATTTTATTTATTGGTTCAACAAATCTACTAGGGCTATTACCTCATTCTTTTACCCCTACCACACAACTCTCTATAAACCTCGGTATAGCAATTCCCCTATGAGCTGGAGCAGTAATTACCGGTTTCCGATATAAAACCAAAGCCTCATTAGCCCATTTCTTACCTCAAGGAACTCCTCTTCCATTAATTCCTATACTCATTATCATCGAAACAATTAGTTTATTTATTCAACCCATAGCATTAGCTGTTCGACTTACAGCTAATATTACAGCAGGACATCTTCTCATTCACTTAATTGGAGGCGCTACATTAGTGCTATTAA---GTATTAGTCCAGTCACCGCACTCATCACATTTATTATTTTAATAATACTAACTATTCTTGAATTTGCAGTTGCCCTAATTCAAGCTTATGTATTTACATTATTAGTTAGCCTCTATCTGCATGATAATA +>Mustela_putorius_voucher_ROM117143_NC_020638 +------------AATGAACGAAAATCTATTTTCCTCATTCACTACCCCTAC---AATAATAGGATTGCCTATCGTCATCCTCATCACCATATTCCCAAGTATTATATTCCCCTCACCCAA---CCGACTGATTAACAACCGACTCATTTCTATCCAACAATGATTGGTTCAATTAACATCAAAACAAATGCTGTCCATTCACAACCAAAAAGGACAAACTTGAGCATTAATACTAATATCCCTAATCCTATTTATTGGGTCTACTAACCTGCTAGGTCTCTTACCTCACTCATTTACCCCTACCACACAACTGTCCTTGAACCTAGGAATAGCTATCCCCCTATGAGCAGGCACAGTAATTACTGGATTTCGACACAAAACAAAAGCCTCTTTAGCCCACTTTCTACCACAAGGAACCCCACTACCCCTAATCCCCATGCTCATTATCATCGAAACTATCAGCCTATTTATTCAACCCATGGCCCTGGCCGTGCGACTAACAGCTAACATCACAGCGGGCCACCTATTAATTCACTTAATTGGAGGAGCCACCCTAGCCCTAATAAA---CATTAGTACTGTTACAGCAATAATTACCTTTTCCATCCTTGTCTTATTAACTATCTTAGAATTTGCAGTAGCCCTTATTCAAGCTTACGTCTTTACCCTACTAGTAAGCCTATATTTACATGACAACAC +>Elaphurus_davidianus_NC_018358 +------------ATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAATA---ATCCTAGGCCTTCCACTCGCCACCCTCATCGTTATGTTCCCTAGCCTATTATTTCCAACATCAAAT---CGTCTAGTAAATAATCGTCTTATTTCCCTCCAACAATGGATACTTCAACTTGTATCAAAACAAATAATAGGAATTCACAATGCCAAAGGACAAACATGAACACTAATACTCATGTCTCTGATCTTATTTATTGGATCCACAAATCTTCTAGGCTTACTACCTCACTCATTTACACCAACCACGCAATTATCAATAAATCTAGGCATAGCCATTCCCCTGTGAGCAGGAGCTGTCGTTACAGGTTTCCGCAATAAAACTAAAGCATCACTTGCTCACTTTCTCCCACAAGGAACTCCAACCCCATTAATTCCAATACTAGTCATCATCGAAACTATTAGTCTTTTTATTCAACCAATCGCCTTAGCCGTACGACTAACAGCTAATATTACTGCGGGACACCTACTAATTCACCTTATTGGAGGGGCTACACTTGCACTAATGAGT---ATCAGTACTACAATAGCTCTTATCACATTTATTGTTTTAGTTCTACTCACAATCCTTGAATTTGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTTCTGGTTAGCCTTTACTTGCATGACAACACA +>Tragelaphus_scriptus_isolate_PhC17_NC_020751 +------------TAATGAACGAAAACCTATTTGCCTCTTTCATTACCCCAG---TAATTCTAGGCCTCCCTCTTGCAACTCTCATCGTCTTATTCCCTAGCCTATTATTTCCAACATCAG---ACCGACTAGTAAACAATCGCCTCATCTCTCTCCAACAATGAGCACTCCAACTTGTATCAAAACAAATAATAGCTATTCACAATACTAAAGGACAAACATGAACGCTAATATTAACATCCCTAATCCTATTCATCGGATCAACAAACCTTCTAGGTCTTCTACCTCACTCATTCACACCGACCACACAACTATCAATAAACCTAGGTATAGCCATCCCCCTGTGAGCAGGAACTGTCATCATAGGATTTCGTAACAAAACCAAGGCATCACTCGCCCACTTCTTACCACAAGGGACACCAACCCCACTTATTCCAATACTAGTTATCATCGAAACCATCAGCCTTTTTATTCAACCAATGGCCCTTGCCGTACGACTAACAGCCAACATCACCGCAGGTCACCTACTGATTCACCTGATTGGGGGAGCTACACTCACACTAATAA---ACATTAGCACCACAACAGCCTTCATCACATTTATTATCCTAATTCTACTAACAATCCTAGAATTCGCAGTGGCCATAATTCAAGCCTATGTATTTACCCTCCTAGTTAGCCTATACCTACATGACAACA +>Cervus_nippon_yesoensis_NC_006973 +------------AATGAACGAAAATTTATTTACCTCTTTTATTACCCCAAT---AATCCTAGGCCTTCCACTAGCTACCCTCATCGTTATGTTTCCTAGCCTATTATTTCCAACATCAAA---TCGTCTAGTAAATAACCGTCTTATTTCCCTCCAACAATGGATACTTCAACTTGTATCAAAACAAATAATAGGAATTCACAATGCCAAAGGACAAACATGGACACTAATACTCATGTCCCTAATCTTATTTATTGGATCCACAAATCTTCTGGGCTTATTACCCCACTCATTTACACCAACCACACAATTATCAATAAACCTAGGCATAGCCATCCCCCTGTGAGCAGGAGCTGTAATTACAGGTTTCCGTAATAAAACTAAAACATCACTTGCCCACTTTCTCCCACAAGGAACTCCGACCCCACTAATTCCCATACTAGTTGTTATCGAAACTATTAGTCTTTTTATTCAACCAATCGCTTTAGCCGTACGACTAACAGCCAATATTACTGCAGGACACCTACTGATTCACCTAATTGGAGGAGCTGCACTTGCACTAATAAG---TATCAGTACTACAATAGCTCTCATCACATTCATTATTCTAGTCCTACTCACAATCCTTGAGTTTGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTTCTAGTCAGCCTTTATTTGCATGACAACAC +>Connochaetes_taurinus_isolate_SUN70_NC_020699 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTATA---ATGTTAGGCCTCCCCCTTGTAACTCTTATCGTCTTATTCCCCAGCCTGCTGTTTCCTACATCAAAC---CGACTAGTCAATAATCGCCTCATCTCTATCCAACAATGACTACTTCAACTCGTATCAAAACAAATAATGAGCATTCACAATACTAAAGGACAAACATGAGCATTGATATTAATATCCCTAATTCTATTTATTGGGTCTACAAACTTACTAGGCCTATTACCCCACTCATTTACACCAACCACACAACTATCAATAAACTTAGGCATGGCTATCCCCCTATGAGCAGGAGCAGTAATCACAGGCTTTCGCAACAAAACCAAAACATCACTCGCCCACTTCCTGCCACAAGGAACACCAACCCCACTAATCCCAATACTAGTAATTATCGAAACCATTAGCCTTTTCATTCAACCAATAGCCCTCGCTGTACGACTAACAGCCAACATCACAGCAGGACACCTATTAATGCACCTAATCGGAGGAGCAACCCTTGCACTAATAAGC---ATCAGTACTACAACAGCTCTCATTACCTTCATTATCTTAGTTTTACTAACAATCCTCGAGTTCGCAGTAGCTATAATTCAAGCTTACGTATTTACCCTCCTAGTCAGCCTGTACCTGCACGATAATACA +>Cebus_apella_NC_016666 +------------TAATGAACCAAAATCTATTCGCCTCTTTCAATATGCCAA---TAATCTTAGGAGTCCCCCTGGCAACACTATTTATCTTATTCCCTACTATACTAATCACACCCTCTA---ACAACCTAAACAACAACCGATTTTCCTCCCTTCAACAATGACTAATCCAACTTATGCTAAAACAAATAATGATAAACCACACCACCAAAGGACAAGCCTGGTCCCTCATACTTTTAACTCTAATCACCTTTATTACCCTAAATAACCTTCTCGGAATTATACCCTATACATTCACACCCACTACGCAACTATCAATAAACCTAGGCATGGCAATTCCCCTGTGAATAGCAACCGTACTTACAGGACTTCGATTTAAAACAAAAGCAACCCTTGCTCACCTCTTACCTCAAGGAACACCTATCCCACTCATCCCAATACTTATTATTATCGAAACTATCAGCCTTTTCATCCAACCAATAGCACTAGCCGTACGTTTAACAGCCAACATCACAGCAGGCCATCTATTAATGCACCTACTAGGAGACACTACTTTAACCCTTCTTT---CTATTTACCTCTCATCCTCCGTAATCACCATTATCGTCATCATTCTATTAATTACCCTAGAGCTAGGTGTAGCTCTAATTCAAGCCTATGTATTTACACTCCTAGTTAGTCTTTACTTGCACAATAATT +>Loxodonta_africana_NC_000934 +------------AGTGAACGAAGAACTATCCACCTTCTTCTATGTACCCGT---------------AGGTACAATAATACTAGCTATTGCATTTCCAGCAATCCTACTTCCAACCCCAAA---TCGCCTAATTACCAACCGTTGAATTACAATCCAACAATGACTAATCCAATTAATCATAAAACAACTTCTATCTATTCATAATACAAAAGGACTGTCATGATCTCTAATATTAATTACTCTAACTTTATTCATTGGTCTAACCAATCTACTAGGTCTATTACCCTATTCATTCGCTCCCACAACACAACTAACCGTAAACTTAAGCATAGCAATCCCCCTATGGACTGGTACAGTTGTCCCGGGTTTCCGATATAAAACTAAAATCTCACTAGCCCATCTTCTCCCACAAGGAACACCTATATTCCTTATCCCTATAATTATTATTATCGAAACCATTAGTCTCCTCATTCGACCAGTCACCCTAGCGGTTCGACTCACCGCCAATATCACGGCAGGTCACTCACTTATTCATTTAACCGGAACCGCCACACTAACTTTATCATC---CATCCATTCAATAACAATTACAGTAACATTTGTTACAGTAATTCTACTTACGATCCTGGAACTTGCCGTAGCACTAATTCAGGCCTACGTCTTTGCTCTACTAATTAGCCTCTACCTACATGAGAATGC +>Delphinus_capensis_NC_012061 +------------ATGAACGAAAATCTATTTACCTCTTTCATAATCCCAGTT---ATACTAGGTATTCCCATTACTACCCTAATTATTATATTTCCCACCATGCTATTTCCAACACCAAAT---CGATTAATCAATAACCGCATGATCGCTATCCAACAATGACTTACTAAACTCACATCAAAACAACTAATAGTTACACATAGCCCCAAAGGACAAACCTGATCCCTAATACTCATCTCACTTTTCCTTTTCATCGCTTCCACAAATCTTCTTGGAATATTACCTCACTCATTCACACCTACTACTCAACTCTCTATAAATTTAGGCATAGCTATTCCATTATGAGCTGGCACCGTCTTTATCGGCTTCCGTAATAAGACAAAAATATCTCTAGCTCACCTTTTACCACTAGGCACACCCACTTTCCTAATTCCTATATTGGTAATAATCGAAACTATTAGCCTATTTATTCAACCCATAGCCCTAGCAGTGCGGCTGACAGCGAATATCACAGCAGGTCACCTACTACTACATCTAATTGGAAGCGCAACCCTTGCATTAATAAGC---ATTAGTCTATTCACAGCTCTCATCACATTTATTATTCTCACCCTATTAATCATCCTTGAATTCGCTGTAGCTCTGATCCAAGCCTACGTATTCACCCTATTAGTAAGCCTATACTTGCAAGACAATACA +>Myodes_regulus_NC_016427 +------------TAATGAACGAAAATCTATTCGCCTCTTTCATTACCCCAA---CAATAATAGGTCTACCCATTGTTATCCTCATCATTATACTTCCATCAATACTCTTAACTTCATCTA---AACGACTAGTCTCTAATCGCTTCCACTTATTCCAACAATGATTAATTAAACTTATCATTAAACAAATAATACTAATTCACTCCCCTAAAGGACGAACTTGATCCCTTATATTAGTATCCCTAATTATATTTATTGGCTCAACAAACCTATTAGGTCTACTACCTCACACATTTACTCCTACAACGCAACTATCAATAAACCTAGGCATGGCCATTCCACTATGAGCCGGGGCCGTAATCTTAGGATTCCGCCACAAACTAAAAGCCTCATTAGCCCACTTCCTACCCCAAGGCACACCAATCTCCCTTATTCCTATACTCATCATCATTGAAACCATTAGCTTATTTATTCAACCTATAGCCCTAGCCGTCCGACTTACAGCCAACATTACTGCAGGACATCTACTAATTCACCTCATCGGAGGAGCCACACTAGTCCTAACAA---GCATTAGCCTACCAACAGCCACCATCACATTTATTATCTTAGGCCTTCTAACTGTCCTGGAGTTTGCAGTAGCACTAATTCAGGCCTACGTATTTACTCTCTTAGTTAGCCTATATCTACATGACAATA +>Balaena_mysticetus_NC_005268 +------------AATGAACGAAAATCTATTTGCCCCTTTCATAGCCCCAGT---TATAGTAGGTATCCCTATCACCACCCTAATTATTATCCTCCCATCCATTTTATTCCCAACACCAAA---CCGACTAATCAATAACCGCATGATCTCCATCCAACAATGATTAACCAAACTAACATCAAAACAACTAATAAATACACACAGCCCTAAAGGACAAACCTGATCTCTAATACTTATTTCACTATTCCTATTTATCGCCTCCACCAATCTCCTTGGAATATTACCCCACTCATTCACACCCACCACACAACTCTCAATAAACGTAGGAATAGCCATCCCCCTATGGGCTGGCACTGTTTTTACTGGTTTCCGCAACAAAACAAAAATATCCTTAGCACACTTACTACCACAAGGCACACCCACCTTCCTCATCCCTATACTAGTAATTATCGAAACTATTAGCCTATTCATTCAACCAGTAGCACTAGCCGTACGACTAACTGCCAACATTACAGCCGGTCACCTACTAATACATTTAATCGGAGAAGCAACCCTTGCACTAATAGA---TATCAGCCTATTTACAACCCTTATTACCTTCACCATTCTCACTCTATTAACCATTCTTGAATTCGCTGTCGCCTTAATCCAAGCCTACGTATTCACCCTCCTAGTAAGCCTATATCTTCATGATAACAC +>Papio_papio_NC_020009 +------------ATGAACGAAAACCTATTTGCCTCATTCTCAGCCCCAACA---ATCCTAGGACAACCAGCCACAATCCCCATCATCATATTCCCCACACTACTAATCCCGACTTCTAAG---CATCTCATTAGCAACCAACTAACCACCATTCAACAAAACCTCATCAAACTTACCCTAAAACAAATAATAGCGCCCCACAACGCTAAAGGACAATCTTGATCTCTAATACTAACATCCTTGATCACCTTTATTACTATAACTAACCTCCTGGGGCTCCTACCTCACTCATTTACGCCAACTACCCAACTTTCTATAAACCTAGCCATAGCAATCCCCCTGTGGGCAGGCACGATCATCACTGGTCTCCGCTTTAAAACTAAAAACTCCCTAGCTCACATACTACCACAAGGTACACCCACACCTCTTATTCCCATACTAGTAATAATCGAAACCATTAGCCTACTTATCCAGCCAATAGCCCTAGCCGTACGACTGACCGCTAACATCACGGCCGGCCATCTATTAATACACCTAATCGGAAATACTATGCTAACACTATCAACC---ATCAACTTCTCCACCACCCTGCTCACCTCTATGCTCCTAACACTACTGACCATTCTAGAAATCGCGGTTGCCCTAATTCAGGCCTATGTCTTCACACTCTTAGTCAGCCTGTACCTACACAACAACACC +>Lepus_granatensis_haplotype_gra_int_NC_024042 +------------TAATGAACGAAAATCTATTCTCCTCTTTTATTACCCCAA---CAATAATAGGCTTACCAATCGTAATCCTAATTATTATATTCCCAACCCTTCTATTTCCTGCCCCTA---CCCGACTGATCAACAATCGACTAGTCTCAGCCCAACAATGATTAGCCCAATTAATTCTAAAACAAATAATGATAATGCACTCCCCTAAAGGACGGACCTGATCCCTTATGCTAATCTCCCTAATTATATTTATTGGCTCAACTAACCTTCTAGGCCTCTTACCCCACTCGTTTACACCAACAACCCAATTATCAATAAATCTAGGGATAGCTATCCCACTATGAGCAGGAGCTGTAATTACAGGCTTCCGATACAAAACTAAAGCGTCACTAGCTCACTTTCTCCCGCAAGGAACACCTGTACCCCTTATTCCTATACTGGTAATTATTGAAACAATTAGCCTGTTCATTCAACCCATGGCCTTAGCTGTACGACTCACAGCCAACATTACAGCAGGCCACTTACTAATGCATCTTATCGGAGGCGCAGCACTCGCCCTAATCT---CAATTAGTCCAACAACAGCCCTAATTACTTTTATTATTCTTATTCTCCTAACGATTCTAGAATTTGCTGTAGCCCTAATTCAAGCCTACGTTTTTACCCTTCTTGTAAGCCTATATTTACACGATAACA +>Lagenorhynchus_albirostris_NC_005278 +------------AATGAACGAAAATTTATTTGCCCCTTTCATAATCCCAAT---TATACTAGGCATCCCTATTACTACCCTAATCATCATATTTCCCACCATACTATTCCCAACACCAAA---TCGATTAATCAATAACCGTGTGATCGCTATCCAACAATGACTTACCAAACTCACATCAAAGCAACTAATAATCACACATAGCCCCAAAGGACAAACCTGATCTCTAATACTCACCTCACTTCTCCTTTTTATTGCCTCCACAAACCTTCTTGGAATACTACCTCACTCATTTACACCTACCACTCAACTCTCTATAAATTTAGGCATGGCCATTCCATTATGAGCTGGCACCGTTTTTATCGGCTTCCGCAACAAGACAAAAATATCTCTAGCCCATCTTTTACCATTAGGCACACCCACTTTCCTAATCCCCATACTAGTAATTATCGAAACTATTAGCCTATTTATTCAACCTTTAGCTTTAGCAGTACGGCTAACAGCGAACATCACAGCAGGTCACCTACTATTGCACCTAATTGGAAGTGCAACTCTTGCATTAATAAA---TATTAGTCTATTCACAGCCCTCATCACATTTATTATCCTCACTCTATTAGTCATCCTCGAATTCGCCGTAGCCCTAATCCAAGCCTACGTATTCACCCTACTAGTAAGCCTATATTTGCAAGACAATAC +>Hippotragus_niger_isolate_ZA4143_NC_020713 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTATA---ATTCTAGGCCTCCCCCTTGCCACCCTAATTGTCTTATTTCCCAGCTTACTATTCCCTACATCAGAT---CGCCTAATTAACAATCGCCTCATCTCTCTCCAACAATGAATTCTCCAACTCGTATCAAAGCAAATAATAAACATTCACAATACCAAAGGACAAACATGAACATTAATACTAATATCCCTAATTTTGTTTATTGCATCAACAAATCTACTAGGCCTGTTACCCCACTCATTTACACCAACTACACAACTATCAATAAACTTAGGCATGGCTATTCCCTTATGAGCAGGGGCTGTAATTACAGGTTTTCGCAGTAAAACTAAAGCATCACTTGCCCATTTCTTACCACAAGGAACACCAACCCCACTAATCCCAATACTAGTAATTATTGAGACTATTAGTCTTTTTATCCAACCAATAGCCCTTGCTGTACGACTAACAGCTAACATCACAGCAGGCCACCTACTAATTCACTTAATTGGAGGAGCCACCCTCGCACTAATGAGT---ATCAACACCGCAACAGCCCTTATTACATTTATTATCCTGATTCTACTAACAGTCCTCGAATTTGCAGTAGCTATCATTCAAGCTTATGTATTTACTCTCTTAGTTAGCCTATACCTGCATGATAACACA +>Martes_martes_NC_021749 +------------TAATGAACGAAAATTTATTCTCCTCTTTCATTACCCCTA---CAATAATAGGACTCCCTATCGTTATCGCCATCACCATATTCCCAAGCATCATATTTCCCTCACCAA---ACCGGTTAATCAACAACCGGCTCATCTCCATCCAACAGTGATTAGTTCAGCTAACATCGAAACAAATACTGTCTATTCACAATCAAAAAGGACAAACCTGAGCACTAATATTAATATCCCTAATTCTATTTACTGGCTCCACCAATCTACTGGGCCTCCTACCACACTCATTCACTCCCACCACACAACTATCCCTAAATCTGGGCATAGCTATCCCCCTATGAGCGGGCACAGTAATTACTGGTTTCCGACATAAAACAAAGGCCTCTTTAGCCCACTTCCTACCACAAGGAACACCACTTCCTCTAATTCCCATGCTTGTAGTCATTGAAACCATCAGTCTATTCATCCAACCCATAGCCCTGGCCGTACGACTAACAGCCAATATCACTGCAGGTCACTTATTAATTCACCTAATTGGAGGAGCCACCCTAGCTTTAATGA---GTATCAGCACTATCACAGCCATAGTGACCTTCACCATCCTCATCCTTCTAACCATTTTAGAGTTTGCAGTAGCCCTTATCCAAGCCTACGTCTTTACTTTACTAGTAAGCCTGTACCTACACGATAACA +>Procavia_capensis_NC_004919 +------------AATGAACGAAAATCTATTTACCTCCTTTATTGCCCCCTC---AATAATAGGCCTCCCTCTAGCAATCTTGATCATCCTATTTCCTACAATATTATACCCCTCCCCAAA---GCGACTAGTCAATAATCGCTTGATCTCTACCCAACAATGACTAACTACCTTGATCATAAAACAATTAATGACAACCCACAACAACAAAGGACGAACATGAACCTTAATACTAGTATCACTAATTCTATTTATTGCCTCAACTAACCTATTGGGGTTATTACCATATTCATTTACACCGACCACCCAATTATCAATGAACTTAGGAATGGCCGTCCCCCTGTGAGCCGGGACAGTATTCCTAGGATTCCGCCACAAAACCAAAGCCTCCTTAGCACATCTACTGCCACAAGGCACACCCACTGCACTAATCCCCATACTAGTAATCATTGAAACCATCAGCCTATTCATTCAACCCGTAGCCCTAGCAGTACGACTAACCGCCAACATCACAGCCGGACACCTACTAATCCACTTGATCGGAAGTGCTACGCTAGCTCTAATGCA---CATCAACCAAACAGCAGCCGCGATCTCATTCATCATCCTATTCCTACTAACAGTACTAGAATTTGCAGTAGCACTAATCCAAGCCTACGTGTTTACTCTTCTAGTAAGCCTATACCTCCACGACAACAC +>Genetta_servalina_isolate_GLC9_NC_024568 +------------ATGAACGAAAATTTATTCGCCTCTTTCATTACCCCAACA---GTAATAGGACTTCCTGTTGTCATTCTAATCATTATATTTCCAAGCCTTTTATTTCCCGCACCTAAC---CGACTAATCAACAATCGCCTAATCTCGCTACAACAATGATTAGTACAACTAACAACAAAACAAATATTAAGCATTCACAACTATAAAGGACAAACCTGAGCCTTAATATTAATATCCCTAATTCTATTTATCGGCTCAACTAACTTATTAGGTCTACTTCCACACTCATTTACACCTACAACTCAATTATCAATAAATCTAGGAATAGCAATTCCCTTATGAGCTGCCACTGTAGTTATCGGATTCCGATATAAAACAAAATCATCTCTAGCTCACTTCTTACCCCAAGGAACTCCATTACCTTTAATCCCTATGCTTGTAATCATTGAGACTATTAGTTTATTTATTCAACCAATAGCTCTAGCCGTACGACTAACAGCCAATATCACTGCAGGTCATCTATTGATTCACTTAATCGGAGGAGCTACTCTAGCCCTAATAAAT---ATTAGCACCTCCGTTGCCCTAATTACCTTTATCATTCTTATCTTACTTACAATTCTAGAATTCGCTGTAGCCCTTATTCAAGCCTATGTTTTTACTCTGCTAGTAAGCCTATACCTACATGACAATACT +>Erinaceus_europaeus_NC_002080 +------------TAATGAACGAAAATTTATTTACCCCTTTTATTGCCCCTA---CACTATTAGGTATCCCGGTAGCCATTCTTATTATTATATTTCCCAGTCTTCTATTTATTAAACATA---CTCGACTTTTTAGTAATCGAATTATAATTTTACAGCAATGAATAATTAAAAAAACTACTAAACAAATGATAAGTAACCACAACCCTAAAGGTCAAACTTGAGCCCTACTGTTAATATCTTTAATAATATTTATTTCTTCATCAAATATCTTAGGTCTTCTACCTCACTCATTTACACCAACAACACAACTTTCAATAAATTTAGGTATAGCAATTCCCCTGTGAGCTGGAGCTGTTATTATAGGATTTCGACTAAAACTAAAAAATTCACTAGCCCATTTTCTTCCTCAAGGAACACCTCTCCCCCTTATTCCTATGCTAATTATTATTGAGACAATCAGCCTACTTATTCAACCAATAGCTCTAGCTATTCGGCTAACCGCTAATATTACAGCAGGACATCTATTAATTCACTTAATTGGAAGTGCAGTATTAAACCTTTTAG---CAATTAACCCTTCCGTAGCTATACTTACATTAATTATTCTTCTTTTATTAACCATTTTAGAATTTGCAGTAGCCCTCATTCAAGCATACGTCTTCACACTTTTAGTTAGCCTTTATTTACACGACAATA +>Rattus_tanezumi_NC_011638 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAAC---AGTAATAGGTCTACCAATTGTCGTAACCATCATCATACTTCCATCAATTTTATTCCCATCATCAGA---ACGCCTAATTAGCAACCGCCTCCACACATTCCAACACTGACTAATTAAGCTTATTCTTAAACAAATAATGTTAATTCATACACCAAAAGGACGAACCTGAGCACTAATAATCGTGTCACTAATTATATTTATTGGCTCAACTAACCTTTTAGGCCTACTTCCCCACACATTTACTCCCACTACTCAACTATCTATAAATCTAAGCATAGCTATCCCTCTATGAGCAGGAGCCGTAATCTTAGGCTTCCGACATAAATTAAAAAGTTCTTTAGCCCACTTCCTACCTCAAGGAACACCCATTTCACTCATTCCCATACTAATTGTTATCGAAACTATCAGCCTTTTCATCCAACCAATAGCACTAGCAGTACGACTGACAGCAAATATCACAGCAGGCCACCTATTAATACACCTAATCGGAGGAGCCACTTTAGTTCTCATAAA---CATTAGCCCACCAACCGCTACAATCACATTTATTATCCTACTCCTACTCACAATACTTGAATTCGCTGTAGCTTTAATTCAAGCTTACGTATTCACTCTTCTAGTAAGCCTGTATCTACATGATAATAC +>Pecari_tajacu_NC_012103 +------------ATGAACGAAAATCTATTCGCCTCTTTCATCACCCCTACA---ATAATGGGACTCCCCATTATCACACTTATCATCATGCTCCCTAACATACTATTCCCAGCACCCAAA---CGACTAATCAACAACCGCATGATCTCTATTCAACAATGAATCATCCAACTTGTAACCAAGCAAATAATAGCAATTCACAACCAAAAAGGACAAACTTGATCATTAATACTCGTGTCCCTTATCTTATTTATTGGCTCAACAAATATCCTGGGCCTACTCCCCCACTCATTCACACCAACAACACAATTATCAATAAACCTAGGCATGGCAATCCCACTGTGAGCAGCCACCGTACTTACAGGACTCCGACACAAAACCAAGTCATCCCTAGCCCATCTCTTACCACAAGGAACACCAACACCCCTTATCCCAATGCTAATTATCATCGAAACAATCAGCCTGTTCATTCAACCCGTAGCCCTAGCCGTACGACTAACAGCCAACATTACAGCAGGACACCTGCTAATTCACCTAATCGGAGGAGCTACCCTAGCACTACTCAAC---ATCAACACTACAACAGCCATAATCACACTTGTTATCCTTGTCTCACTTACAATTCTAGAATTTGCAGTAGCCTTAATTCAAGCATACGTATTCACACTTCTAGTGAGCCTATATCTACACAACAACACG +>Balaenoptera_bonaerensis_NC_006926 +------------TAATGAACGAAAATCTATTTGCCCCTTTTATAATCCCAA---TAATACTAGGCCTCCCTATTACCACTCTAATCATCATCCTCCCATCCATCCTATTTCCCACACCAA---ACCGACTGGTCAACAACCGCACGATTTCCATTCAACAATGACTAACTAAACTCACATCAAAACAATTAATAAATGTACACAGTCCTAAAGGACAAACTTGATCTCTAATACTCATCTCACTATTCCTATTTATTGCCTCCACTAATCTCCTTGGAATATTACCTCACTCATTTACACCTACCACTCAACTTTCAATAAACGTAGGAATAGCTATCCCCCTATGGGCCGGTGCCGTTATCACAGGCTTCCGCAACAAAACAAAAATATCCTTAGCACATCTACTACCACAAGGTACACCCACCTTTCTCATTCCCATACTAGTAATCATTGAAACCATCAGCCTATTCATTCAACCAGTAGCACTAGCCGTACGACTAACTGCCAACATCACAGCAGGTCACTTACTAATACATCTAATTGGAGAAACAACCCTTGTATTAATAA---GTACCAGTTTATTAACAGCCCTCATCACTTTCACTATCCTTACTCTATTAACCATTCTTGAATTTGCCGTAGCCCTCATCCAAGCTTACGTATTTACCCTCCTAGTAAGCCTATACCTTCATGATAACA +>Pseudorca_crassidens_NC_019577 +------------AATGAACGAAAATCTATTTGCCTCTTTCATAACCCCAAT---CATACTAGGCATTCCTATTACTACTCTAATTATTATATTTCCCACCATACTATTCCCGACACCAAA---CCGATTAATCAATAATCGCGTAATCACTATTCAACACTGACTTATCAAACTCATATCAAAACAACTGATAGTTATACATAACCCCAAAGGACAAACCTGATCCCTGATACTCATCTCGCTTTTCCTTTTCATCGCTTCCACAAACCTTCTTGGAATATTACCTCATTCATTCACACCTACTACTCAACTCTCTATAAATTTAGGCATAGCCATTCCACTATGAGCTGGCACCGTCTTTATTGGTTTCCGTAATAAAACAAAAATATCCCTAGCCCATCTTTTACCATTAGGCACACCCACTTTCCTAACTCCCATATTAGTGATAATCGAAACTATCAGCCTACTTATTCAACCCTTAGCTCTAGCAGTACGACTAACAGCGAACATCACAGCAGGTCACCTATTACTACACCTAATTGGAAATGCAACTATTGCATTAATAAGTATTATTACCCTATTCACAGCTCTCATCACATTTATTATCCTTACTTTATTGGTCATCCTCGAATTCACCGTAGCCCTAATCCAAGCTTACGTATTCACCCTGCTAGTAAGCCTATACTTGCAAGACAATAC +>Nasua_nasua_voucher_ROM108237_NC_020647 +------------ATGAACGAAAATCTATTCGCCTCCTTCACTACCCCTACG---CTAATAGGTCTTCCTCTAGTTATACTAATCATCATAGCCCCAAGTATATTATTTCCATCACCCAAC---CGACTAATCAACAACCAACTAGTCTCGATACAACAATGACTTGTGCAATTAGTATTAAAACAAATATTATCCACCCACAATAACAAGGGACAAACCTGAGCACTAATATTAACGTCACTTATCCTATTTATTGGTTCTACTAACCTACTGGGGTTGCTTCCCTACTCATTTACCCCAACTACCCAACTGTCCATGAACCTAGGAATAGCAATCCCACTATGGGCAGGGACAGTGGTAATCGGATTTCGATATAAGACTAAATCATCTCTAGCCCACTTCCTACCTCAAGGAACACCTGCCCCTCTCATTCCCATGCTCGTAATTATTGAAACCATCAGCTTATTCATCCAACCCGTAGCCCTAGCCGTGCGACTAACAGCCAACATTACCGCAGGTCACCTATTAATCCACTTAATCGGAGGAGCCACATTGACCTTAGCAAAT---ATTAGCACACCTGTAGCCATAACTACCTTTATTACCCTAATTCTACTTACCATTTTAGAATTCGCCGTAGCACTAATCCAAGCCTACGTATTTACCCTTCTAGTAAGCTTATACCTACATGACAGTACC +>Trachypithecus_pileatus_NC_024529 +------------TAATGAACGAAAATTTATTTACCCCATTTACAATCCCCA---CACTCCTAAATTTACCCGCTGTAGTACCCATTATTCTATTCCCCATATTATTATTTCCAACCTCCA---AGCACCTTGTTAATAACCGACTAATTGCTATTCAACAAAATCTGACTCAACTGATCCTAAAACAAATAATAATAATTCATAATACAAAAGGACGAACTTGATCCTTAATACTAGTATCTCTAATTACTTTTATTGCTACAACCAACCTCCTCGGGCTATTACCTCACACATTTACACCCACCACCCAACTGTCTATGAATTTAGCAATAGCAATTCCTCTATGAGCAGGTACAGTAATTACAGGCCTTCGCTTCAAAACCAAAAATTCCCTGGCCCATTTTCTACCACAAGGCACACCCACACTTCTTATCCCTATACTAGTAATCATTGAAACCATCAGCTTATTTATTCAACCAGTAGCCCTAGCCGTACGCCTAACTGCTAATATTACAGCAGGGCATCTACTCATGCATCTAATCGGAAGCGCCGTACTAGCGCTATCAA---CCATTAATTTTCTTGCAACTTCACTAACCTTCGTACTCCTATTGCTATTAACAATTCTAGAGATTGCAGTTGCCCTAATCCAAGCCTATGTTTTCACACTCTTGGTAAGCCTTTACTTACACGATAATA +>Litocranius_walleri_isolate_AWWP_NC_020716 +------------AATGAACGAAAATTTATTTGCCTCTTTCATTACCCCTAT---AATTCTAGGCCTTCCTCTAGTTACCCTCATTGTCCTATTTCCCAGCCTACTATTTCCAACATCAAA---TCGACTAATCAACAATCGTCTTATTTCCCTCCAACAATGAATCCTTCAACTTATCTCAAAACAAATAATAAGCATCCATAACCCTAAAGGACAAACATGAGCACTAATACTAATATCCTTAATTCTATTTATTGGATCAACAAACCTACTAGGCTTACTACCCCACTCTTTTACACCAACCACACAATTATCTATAAACCTAGGAATAGCCATTCCCCTTTGAGCAGGGGCTGTAATCACAGGCTTCCGCAATAAAACCAAAGCATCACTTGCCCACTTTTTACCACAAGGAACACCTACTCCTTTAATTCCTATACTAGTAATTATTGAAACCATCAGCCTATTTATTCAACCAATAGCCCTTGCAGTACGACTAACAGCTAACATTACAGCAGGACATCTATTAATTCACTTAATCGGAGGAGCCACACTGGCACTAATAAA---CATCAGTACTACAACAGCTTTTATTACATTTATTATCTTAATCCTATTAACAATCCTTGAATTTGCAGTAGCCATAATCCAAGCTTATGTATTTACCCTTCTAGTTAGCCTATATTTACACGATAACAC +>Akodon_montensis_NC_025746 +------------ATGAACGAAAATTTATTCGCCTCTTTCGCTACCCCAACA---GTAATAGGACTTCCTATCGTCATTCCCATTATTATGATTCCATCTATAATAATCACCTCCTCCTCA---CGCATCTTAACCAACCGCCTACTCACCTTTCAACACTGACTAATCAAAATTATCACAAAACAAATAATAATGATTCACTCAGCAAAAGGTCGCACATGATCTCTAATACTATTATCTCTTATTATCTTTATTGGCACCACCAATCTCCTAGGCCTCCTACCTCACACATTCACTCCTACAACACAGCTATCCATAAACCTGGGCATGGCAATCCCCCTATGAGCTGGGACAGTAGTCTTAGGGTTTCGCCATAAAACAAAATCTTCACTAGCCCACTTCTTACCTCAAGGTACACCCCTACCTCTTATCCCAATACTAATTATTATCGAAACTATTAGTCTCTTCATTCAACCAATAGCCCTAGCGGTACGACTCACAGCTAACATTACTGCCGGTCACCTATTAATTCATTTAATTGGAGGTGCTACTCTAGTTCTAACCTCT---ATTAACTTCCCCACAGCCCTTATCACATTTATTATCTTAACTATACTAACCATTCTAGAATTCGCCGTAGCCTTAATTCAAGCCTACGTATTTACCCTACTGGTCAGCCTCTACCTACATGATAACACA +>Orcaella_brevirostris_NC_019590 +------------TAATGAACGAAAATCTATTTACCTCTTTCATAATTCCAA---TTGTACTAGGTGTCCCTATTACCACTCTAATTATTATATTTCCTACTATACTATTCCCAACACCAA---ATCGATTAATCAATAACCGTACAATCGCTATTCAACAATGACTTACCAAACTCACATCAAAACAACTGATAACTACACATAATCCCAAAGGACAAACCTGATCTCTGATACTTACCTCACTTTTCCTTTTCATCGCTTCCACAAACCTTCTCGGAATATTACCTCACTCATTCACACCTACTACCCAACTCTCCATAAATTTAGGTATAGCTATTCCACTATGAGCTGGCACCATCTTTATCGGTTTCCGTAACAAGACAAAAATATCTCTAGCCCACCTTTTACCATTAGGCACACCCACTTTCCTAATTCCTATATTGGTAATAATCGAAACTATCAGCCTATTTATTCAACCTTTAGCTCTGGCAGTACGACTAACAGCGAACATCACAGCAGGTCACCTATTACTACACCTAATTGGAAGCACAACTCTTGCATTAATAA---ACATTAGTCTAT---TAGCCCTCATCACATTTATTATCCTCACTCTATTAATTATCCTCGAATTCGCCGTAGCCCTAATCCAAGCCTACGTATTCACTCTACTAGTAAGCCTATACTTGCAAGACAATA +>Rousettus_aegyptiacus_NC_007393 +------------AATGAACGAAAATCTATTCGCCTCTTTCATTACCCCTAC---GATAATAGGCCTACCTGTTGTCACCCTGATCATTATATTCCCAACTATCCTGTTTCCATCATCTAA---TCGACTAATCAACAACCGCCTGATTGCAATTCAACAATGAATCCTTCACCTAACGGCCAAACAAATAATATCAATCCACAACCACACCGGCCAAAAATGATCCCTAATACTTATATCACTTATTTTATTCATCGGTTCAACCAACCTACTAGGCCTTCTCCCACACTCCTTCACACCAACAACCCAACTGTCGATAAACCTGGGAATGGCCATCCCCCTCTGAGCAGGAACAGTAGCCCTAGGGTTCCGCCACAAAACAAAAGCATCACTTGCCCACTTCCTCCCCCAAGGAACCCCTGTCCCCCTAATCCCTATACTAATTATTATCGAAACTATCAGCTTATTTATTCAACCCATAGCCCTAGCGGTACGGTTAACTGCAAACATCACTGCTGGTCACCTACTAATCCACCTTATCGGAGGAGCAACCCTAGCACTACTGAA---CATCAACATGTTAACATCATTCATTACATTCATTATTCTCGTCTTACTAACAATCCTCGAATTTGCTGTGGCCCTAATCCAAGCTTACGTATTTACCCTGCTAGTTAGCCTATATCTACACGACAACAC +>Mus_cervicolor_isolate_R4864_NC_025269 +------------ATGAACGAAAATCTATTTGCCTCATTCATTACCCCAACA---ATAATAGGCTTACCTATTGTTGTGACCATTATCATGTTCCCATCCATCCTATTCCCATCCTCAAAA---CGCCTAATTAACAACCGACTTTACTCCTTTCAACACTGACTAATCAAACTCATTATCAAACAAATAATATTAATTCACACACCAAAAGGACGAACATGAACACTAATAATTGTCTCCCTCATGATATTTATTGGATCCACAAACCTTCTAGGACTTCTACCTCATACATTCACACCTACTACCCAACTGTCAATAAACTTAAGCATGGCAATTCCACTATGAGCTGGAGCTGTAATTATAGGCTTCCGACACAAACTAAAAAGCTCCCTTGCACATTTCCTTCCACAAGGAACACCCTTTACACTAATTCCAATACTAATCATTATCGAAACAATTAGTCTATTTATTCAACCCATAGCACTAGCAGTTCGACTAACAGCTAACATTACTGCAGGTCACTTATTAATACACCTAATTGGAGGAGCCACTCTAGTACTAATAAAT---ATTAGCCCACCAACAGCTACAATTACATTCATTATTCTTCTTCTGCTTACAGTATTAGAGTTCGCAGTAGCTTTAATTCAAGCCTATGTATTTACTCTCCTAGTAAGTCTATATCTACATGATAACACA +>Phascogale_tapoatafa_NC_006523 +------------TAATGAACGAAAATCTATTTGCCCCTTTCATCTGTCCTA---CTATTATAGGCATCTCAACCCTCCCTATTATCATATTATTCCCCTGCCTAATCTTCTCAACGCCCA---AACGATGATTACCCAATCGAATCCAAATTTTACAGGTTTGACTTATTCGACTCATCACCAAACAAATAATATTAATACATAACAATATTGGTCGAACATGGGCCCTAATACTTATAACTCTCATTCTATTTATTGCCACTACTAATCTCTTAGGGCTCTTACCATATTCATTTACTCCTACCACACAACTCTCAATAAATATTAGCATAGCTATCCCTCTCTGAATAGGGACAGTTATCCTAGGATTCCGTAATAAACCAAAAGCCTCACTAGCCCATTTCCTTCCACAAGGCACACCAACACCCCTAATCCCCATATTAATCATCATCGAAACAATTAGCCTGTTTATCCAACCATTAGCGCTAGCAGTACGACTTACTGCTAACATCACCGCCGGACATCTTCTAATTCATCTTATCGGATCCGCTGCCCTTGCGCTTATAT---CCATTAATATCTTCCTATCTTCTATTACGCTCATCATTCTCTTCCTTCTCACAATTCTGGAACTGGCTGTAGCTCTTATCCAAGCCTATGTTTTCACTCTCCTAGTAAGCCTCTACTTACATGATAATT +>Perameles_gunnii_NC_006521 +------------AATGAACGAAAATTTATTTGCCCCATTCATCACCCCTAC---AATTATAGGTATTACTACACTTCCAATCGTAATATTTTTCCCTTGTCTAATTCTTTCAACCCCTAA---ACGTTGATTACCAAATCGCATCCAAACCCTACAAATATGACTTATCCGCCTAATTACTAAACAAATAATAATTATACATAACGAACGAGGACGATCATGAACTCTCATATTAATATCACTAATTTTATTTATTGCATCAACCAACCTACTAGGACTAATACCATACTCCTTCACTCCAACAACTCAATTATCTATAAATATTGGAATAGCCCTACCCCTATGAATAGGCACCGTACTAATAGGATTCCGAAATAAACCAAAAGCATCTCTAGCCCATTTCCTTCCTCAAGGCACTCCAACTCCTTTAGTACCTATACTAATTATTATTGAAACTATTAGCCTATTTATTCAACCTTTAGCTCTAGCAGTTCGACTCACCGCCAATATCACAGCAGGCCACCTATTAATTCACTTAATTGGCTCTGCTACCTTAGCACTAGCCTC---AATCAGCATTACAATCTCAACAATCACATTCATCATTCTATTATTACTTACTATTCTAGAATTTGCCGTCGCCATAATCCAAGCATATGTATTTACACTTCTAGTTAGCCTATACTTACATGACAACTC +>Beatragus_hunteri_NC_023542 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTGTA---ATACTAGGCCTCCCCCTTGTTACCCTCATCGTCTTATTTCCTAGCCTACTATTTCCCACATCAAAC---CGACTAATCAACAACCGCCTCATCTCCCTCCAGCAATGAATACTTCAACTTGTATCAAAACAAATAATGAGTATTCACAACACCAAAGGACAAACATGAGCACTTATATTAATAACCCTAATCCTATTTATTGGATCTACAAACCTTCTAGGCCTATTGCCCCACTCATTTACACCAACCACACAACTATCAATAAACTTGGGCATAGCCATCCCCCTGTGAGCAGGAGCAGTAATTACAGGCTTCCGCAACAAGACTAAAGCATCACTTGCCCACTTCCTACCACAAGGAACACCAACCCCACTAATTCCAATGCTAGTAATCATCGAGACCATTAGCCTTTTCATCCAACCAGTAGCCCTCGCCGTGCGATTGACAGCCAACATCACAGCAGGACACCTGTTAATTCACTTAATTGGAGGAGCCACCCTTGCACTAATGAAT---ATCAGCACTACAACGGCTCTCATCACCTTCATCATCCTAGTCCTACTAACAATTCTCGAATTCGCAGTAGCCATAATTCAAGCCTACGTGTTTACCCTCCTAGTCAGTCTGTACTTGCACGACAACACA +>Aotus_azarai_NC_021939 +------------TAATGAACCAAAATTTATTTACCTCTTTCAATATCCCAA---TAATATTAGGAATCCCCTTAGTAGTATTAATTATTTTATTTCCTATCACATTAATTATGCCCTCCA---ACAAGCTAATCAACAACCGACTTTCTTCTCTTCAACAATGATTAATTCAACTGACACTAAAACAAATGATAATAGTCCATACCAATAAAGGACGAACATGATCCCTTATACTCTTAGCTCTAATCTCCTTCATTGCTCTAAATAACCTCCTTGGACTCACACCCTATGCATTTACACCCACTACCCAACTATCAATGAACCTAGGCATAGCAATCCCCCTATGAGCAGCAACCGTATTTATAGGACTTCGATTCAAAACAAAGGCGTCTCTTGCCCACTTCCTACCCCAAGGAACACCCGTCCCACTTATCCCAATACTAATCATTATTGAAACAATTAGCCTGTTTATCCAGCCAATAGCACTAGCTGTACGATTAACAGCCAATATTACAGCAGGCCATCTACTAATACACTTGCTTGGGGATACTGCACTAACCCTTATAT---CAATTTATGTATCTTCCTCTACAATCACCATTATTATTATTATCTTACTGATTACTCTAGAGTTAGGTGTAGCTCTAATTCAAGCTTATGTCTTTACTCTTCTAGTAAGTCTATACTTACACGATAACT +>Melursus_ursinus_NC_009970 +------------AATGAACGAAAATTTATTCACCTCTTTCACTACCCCCAC---GATAATGGGGATTCCTATTGTAGTCTTAATTGTTATGTTTCCGAGTCTTTTATTTCCTTCCCCTAG---CCGACTGATCAATAATCGCTTAGTATCCATTCAACAGTGACTAGTCCGGCTAACATCAAAACAAATATTATCCACTCATAATCACAAAGGACAAACCTGGGCACTAATATTGATATCACTAATCCTGTTTATTGGCTCAACCAACCTTCTGGGTTTATTACCGCACTCATTCACACCTACCACTCAGCTGTCAATGAACTTGGGAATGGCTATCCCCTTGTGGGCGGGTACAGTTATTACTGGGTTTCGATACAAGACTAAAGCATCCTTGGCCCACTTCCTACCTCAAGGAACACCTTTACCTCTGATCCCTATACTCGTAATTATCGAGACAATCAGTCTATTCATCCAACCTGTAGCCTTAGCCGTACGACTGACCGCTAATATTACTGCAGGTCACTTGCTCATCCACTTAATCGGAGGAGCTACCTTAGTCCTAACAAG---TATTAGTACCATTACAGCCCTTATCGCCTTCACTATTCTAGTGCTACTCACCATTCTCGAGTTCGCTGTAGCCCTCATTCAGGCCTACGTCTTCACCCTGCTAGTAGGCCTATACTTACACGATAACAC +>Rhizomys_pruinosus_NC_021478 +------------ATGAACGAAAATTTATTCTCCTCTTTCACTACCCCAACA---CTCATAGGTCTTCCTATTGTTATTTTCATTATCTTCTTTCCAAGCATTTTTTTAACTAAATCTAAC---CGGTTTATAAATAACCGATTTTTATCATCACAATCATGACTACTTCAAGTAATCACAAAACAAATAATACTCATTCATACACCAAAAGGCCGCTCATGAACACTAATACTGATATCACTAATTATTTTTATTGCCTCTAGCAACTTACTAGGCCTTCTACCCTATACATTTACTACTACTACACAACTCTCAATAAACCTAGGCTTAGCTATTCCACTATGAGCAGGAGCAGTAATCTTAGGCTTCCGACATAAAACAAAAATATCTTTAGCCCACTTTCTCCCCACAGGAACACCAATTATATTAATCCCTATACTCATTATCATTGAAACTATTAGCCTGTTAATTCAACCAATAGCCCTAGCCGTTCGTCTTACTGCCAACATTACAGCAGGACACTTACTCATACATCTAATTGGTAGCGCCACAATAGCCCTAACTTCA---ATCAATACCCCAATCGCCCTTATCACATTTATTATCCTTATTCTTCTAACAATTTTAGAACTTGCCGTAGCACTTATCCAAGCTTATGTATTCACACTTCTTGTTAGTCTATACTTACACGAAAATTCC +>Mesoplodon_grayi_voucher_Mgr159_NC_023830 +------------TAATGAACGAAAATCTATTTGCCCCTTTCACAGTCCCAA---TAATAATAGGCATCCCTATCATCACTTTAATCATTATATTTCCTACTATTTTATTTCCTACACCAA---ATCGACTAATTAACAACCGTATAATTTCTCTCCAACAATGACTAACTAAACTCACATCAAAACAATTAATAAATTCACATAGCCCTAAAGGCCAAACTTGATCTCTAATACTCATTTCACTTCTCTTATTTATTGCCTCTACAAACCTTCTTGGAATATTACCCCACTCATTTACACCTACTACACAACTCTCAATAAATATCGGAATAGCCATTCCTCTATGAGCTGGCACAGTAATTACAGGCTTCCGTAATAAAACAAAAATATCCTTAGCCCATCTCTTACCACAAGGCACACCTACTTTTCTCATCCCTATATTAGTAATCATTGAAACCATTAGCCTATTTATCCAACCTGTAGCACTAGCCGTACGACTAACTGCTAATATCACAGCAGGACACCTATTAATACATCTAATTGGAAAAACAACCCTTGTATTAATAA---GCATTAACCTATCTGTAGCCCTCATTACATTTATAATCCTTATCTTACTAACTATTCTTGAGTTCGCTGTCGCTTTAATCCAAGCTTATGTATTTACTCTCTTAGTAAGCCTATACTTACACGACAATA +>Eulemur_rufus_NC_021948 +------------AATGAACGAAAATTTATTTGCCTCTTTCATTACCCCAAC---AATTGTAGGAATCCCTATCGTCATCTTTATCATTATAATTCCAAGCATTCTCTTTCCCTCCCCTAC---TCGCCTAATTAATAACCGACTAACCTCATTACAACAATGACTAATTCAGTTGATCCTAAAACAATTAATATTAATTCACAATATCAAAGGACGAACTTGATCTCTAATATTAATCTCACTAATTCTATTTATTGGCTCTACTAATTTACTAGGCTTATTGCCCCACTCATTCACTCCTACCACACAACTATCTATAAATCTAGGCATAGCAATTCCACTCTGAGCAGCTGCGGTAATCAAAGGTTTCCGCCACAAAACAAAGGCATCCCTGGCCCACTTCCTACCTCAAGGAACACCAATCCCTTTAATTCCCATACTAGTAATTATTGAAACCATTAGCCTCTTCATTCAACCTATAGCCCTGGCCGTACGACTAACTGCCAATATTACAGCAGGCCACCTTCTTATGCATCTAATTGGAGGGGCTACCTTAGTACTTTCTTC---CATCAGCCCTACTACAGCTTCGATCACATTCATTATCCTCACCCTTCTTACAATTCTTGAATTCGCCGTTGCTCTAATTCAGGCCTATGTATTTACCCTACTAGTTAGCCTTTACTTACATGACAACAC +>Cebus_xanthosternos_NC_021961 +------------ATGAACCAAAATCTATTTGCCTCTTTCAATATGCCAATA---ATCTTAGGAGTCCCCCTAGCAACACTATTTATCTTATTCCCTACCATACTAATTACACCCTCTAAC---AACCTAAACAACAACCGATTTTCCTCTCTTCAACAATGACTAATCCAACTTACACTAAAACAAATAATGATAAACCATACCACCAAAGGACAAGCCTGATCCCTTATACTTTTAACTCTAATCACCTTTATTACCCTAAATAATCTTCTCGGGATTATACCCTATACATTCACACCCACTACGCAACTATCAATAAACCTAGGCATGGCAATTCCCCTGTGAATAGCAACCGTACTTATAGGACTTCGATTTAAAACAAAAGCAACCCTTGCTCATTTTCTACCCCAAGGAACACCTACTCCACTTATCCCTATACTTATTATTATTGAGACTATCAGCCTCTTCATCCAACCAGTAGCACTAGCCGTACGATTAACAGCCAACATCACAGCAGGCCACCTATTAATGCACCTACTAGGAGACACTACTTTAACTCTTCTCTCT---ATTTACCTCTCATCCTCCGTAATCACCATTATCGTCATCATTCTATTAATTACCCTAGAACTAGGTGTAGCCCTAATTCAAGCCTATGTATTTACACTCCTAGTTAGTCTCTACTTGCACAATAATTCA +>Papio_cynocephalus_isolate_north_NC_020007 +------------TAATGAACGAAAACCTATTTACCTCATTCTCAGCCCCAA---CAATCCTAGGACAACCAGCCACAATCCCCATCATCATATTCCCCACACTACTAATCCCGACCTCTA---AACATCTCATTAACAACCAACTAACCACCGTTCAACAAAACCTCATCAAACTTACCCTAAAACAAATAATAGCACCCCACAACGCTAAAGGACAATCCTGATCTCTAATACTAATATCCTTGATCACCTTTATTACCATGACTAACCTCCTAGGGCTCCTACCTCACTCATTTACGCCAACCACCCAACTTTCTATAAACCTAGCCATAGCAATCCCCCTGTGGGCAGGCACGATCATCACTGGTCTCCGCTTTAAAACTAAAAACTCCCTAGCTCACATACTACCACAAGGTACACCCACACCCCTTATTCCCATATTAGTAATAATCGAAACCATTAGCCTACTTATCCAGCCAACAGCCCTAGCCGTACGACTGACTGCTAACATCACAGCCGGCCACCTATTAATACACCTAATCGGAAATACTATGCTAACACTATCAA---CCATCAACCTCTCCACCACCCTACTCACTTCTGTACTCCTAATACTACTGACCATTTTAGAGATCGCCGTTGCCCTAATCCAGGCCTACGTCTTCACACTCTTAGTCAACCTGTACCTACACAACAACA +>Dama_mesopotamica_isolate_CYTO_NC_024819 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAAT---AATTCTAGGCCTTCCACTCGCTACCCTTATCGTCATGTTCCCTAGCCTATTATTTCCAACATCAAA---TCGTCTAGTAAACAATCGCCTTATTTCTCTCCAACAATGAATACTTCAACTTGTAGCAAAACAAATAATAGGAATTCACAACGCTAAAGGACAAACATGAGCACTGATACTCATATCTTTAATCTTATTTATTGGATCCACAAATATCTTAGGCTTATTACCCCACTCATTTACACCAACCACACAATTATCAATAAACCTAGGCATAGCCATTCCCCTGTGAGCAGGGGCTGTAGTTACAGGCTTCCGTAATAAAACTAAAGCATCACTTGCTCATTTCCTTCCACAAGGAACCCCAACTCCACTAATTCCCATGCTAGTAATCATCGAAACTATTAGTCTTTTTATTCAACCAATCGCCTTGGCCGTACGATTAACGGCCAATATTACTGCAGGACACCTGCTAATTCACTTAATTGGAGGAGCCACACTTGCACTAACAAG---CATCAGTACTACAATAGCTCTTATTACATTTATTATTCTAGTTCTACTCACAATCCTTGAATTCGCAGTAGCTATAATCCAAGCCTACGTATTTACCCTTCTAGTTAGCCTTTACTTGCATGACAATAC +>Eospalax_rothschildi_NC_018535 +------------ATGAACGAAAATTTATTCGCCTCTTTCTCTACCCCTACA---TTAATAGGAATTCCCATTGTCATTGCCATTATTATACTTCCAACTATTTTATTTTCACACTCTAAT---CGTATTTTTAATAACCGACTAGTAATATTCCAACAATGAATCATCCAACTAATTACTAAACAAATAATGTCTATTCACTCACAAAAAGGACGCTCATGGACTCTATTACTTATCTCACTAATTATCTTTATTGGTTCAACCAATCTCTTAGGCCTTCTACCACATACATTCACCCCAACAACACAACTATCAATAAATCTAGGAATAGCAATCCCACTTTGAGCCGGAGCAGTAATCCTAGGATTTCGTAACAAAACAAAATCTGCCCTAGCCCATTTCCTTCCACAAGGAACACCTATCCCTTTAATTCCTATACTAATTATTATCGAAACAATCAGCTTATTTATCCAACCAATAGCCTTAGCAGTTCGATTAACTGCTAATATCACAGCTGGTCATCTACTAATTCATCTTATTGGAGGAGCAACTTTAGCTCTATTATCA---ATTAATATCCCCACAGCTTTAATTACATTTTTAATCCTAACCCTACTAACTATTCTAGAATTTGCCGTAGCACTAATTCAAGCCTACGTTTTCACCCTTCTAGTTAGCCTCTATCTACATGATAATACC +>Brachyphylla_cavernarum_NC_022421 +------------TAATGAACGAAAATTTATTCGCCTCTTTCATTACCCCTA---CAATAATGGGCCTCCCCATTGTTATCCTTATTATTATATTCCCCACCATTATATTTCCATCAACCA---ACCGACTAATCAATAACCGGCTAGTAGCCATTCAACAATGACTAATCCACTTAACCTCTAAACAGATACTCTCTATTCATAATCACAAAGGTCAAACGTGAGCTCTAATACTTATATCCTTAATTCTATTCATTGGGACAACAAACCTGCTAGGTCTACTCCCCCACTCCTTTACCCCAACAACACAACTATCAATAAACCTCGGAATGGCTATTCCTCTATGAGCAGGAACAGTCATCTTAGGATTCCGATATAAAACTAAATCTTCCCTCGCACATTTCCTCCCACAAGGCACCCCACTACCCTTAATTCCCATGCTGATTATTATCGAAACAATCAGCCTATTCATTCAACCAATGGCATTAGCCGTACGGCTAACCGCCAATATCACTGCAGGCCACCTCCTAATTCACCTAATCGGAGGCGCAACCCTCGCTTTAATAA---GTATCAGCGCAACCACTGCTCTCATCACATTCGTAATCCTAATTTTACTGACTATTCTAGAGTTTGCTGTAGCCCTAATTCAGGCCTACGTATTCACCCTATTAGTCAGCTTATATCTACATGACAATG +>Propithecus_edwardsi_isolate_FAN43_NC_026086 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAAC---AATTGTAGGAATCCCTATTGTGATCCTAATCATCGCAGTCCCTAGTATTCTCTTCCCTTCGCCCAC---CCGTCTCATTTCCAACCGATTGACTTCCTTACAACAATGACTTATTCAACTAGTACTAAAACAACTAATAATGATACACAGCATTAAAGGACGAACTTGGTCCCTCATACTAATTTCACTAATCCTATTTATTGGTTCAACCAACTTACTAGGTCTATTACCCCACTCATTCACCCCCACTACTCAACTATCAATGAATCTAGGCATAGCCATCCCACTATGAGCTGCTGCAGTCATTACAGGCTTTCGTCACAAAACAAAAATATCCTTAGCTCACCTACTACCACAAGGAACGCCAGTCCCTCTTATTCCCATACTAGTAATCATCGAAACCATTAGCCTTTTCATTCAACCTATAGCATTAGCCGTACGATTGACGGCTAACATTACAGCAGGCCACCTACTCATACACTTAATTGGTGGAGCCACCTTAGTATTAACCTC---AATTAGTCCCACCACTGCCTCAATTACATTTACTATTCTTATTCTCCTTACAATCCTTGAATTCGCCGTCGCCCTAATCCAAGCCTATGTATTTACTTTACTAGTTAGCCTTTATTTACATGACAACAC +>Martes_americana_voucher_ROM116315_NC_020642 +------------ATGAACGAAAATTTATTCTCCTCTTTCATTACCCCTACA---ATAATAGGTCTCCCTATTGTTATCGCCATCACCATATTCCCAAGCATCATATTTCCCTCACCAAAC---CGGTTAATCAACAACCGGCTCATCTCCATCCAACAGTGATTAGTACACCTAACATCAAAACAAATACTGTCTATTCACAATCAAAAAGGACAAACCTGAGCACTAATATTAATATCCCTAATCCTATTTATTGGCTCCACCAATCTACTAGGCCTCCTACCGCACTCATTCACCCCCACCACGCAACTATCCCTAAATCTGGGTATAGCTATCCCCCTGTGAGCGGGCACAGTAGTTACCGGTTTCCGGCATAAAACAAAGGCCTCCTTAGCCCACTTCCTACCACAAGGAACACCACTTCCTCTAATTCCCATGCTTGTAATCATTGAAACCATCAGTCTATTCATCCAACCTATAGCCCTGGCCGTGCGACTAACAGCCAATATCACTGCAGGTCACTTATTAATTCACCTAATTGGAGGAGCCACCCTAGCTTTAATGAGT---ATCAGCACTATCACAGCCATAGTGACCTTCACCATCCTCATCCTTCTAACCATCTTAGAGTTTGCAGTAGCCCTTATCCAAGCCTACGTCTTTACTCTACTAGTAAGCCTGTACCTACATGACAACACT +>Mus_musculus_molossinus_NC_006915 +------------TAATGAACGAAAATCTATTTGCCTCATTCATTACCCCAA---CAATAATAGGATTACCAATCGTTGTAGCCATCATTATATTTCCTTCTATCCTATTTCCATCCTCAA---AACGCCTAATCAACAACCGACTCCATTCTTTCCAACACTGACTAATTAAACTTATTATCAAACAAATAATGCTAATTCACACACCAAAAGGACGGACATGAACCCTAATAATTGTCTCCCTAATCATATTTATTGGATCAACAAATCTCCTAGGCCTTTTACCACATACATTTACACCCACTACCCAACTATCTATAAATCTAAGTATAGCCATTCCACTATGAGCTGGAGCCGTAATTACAGGCTTCCGACACAAACTAAAAAGCTCACTCGCCCACTTCCTTCCACAAGGAACTCCAATCTCACTAATTCCAATACTTATTATTATTGAAACAATTAGCCTATTTATTCAACCAATGGCATTAGCAGTCCGGCTTACAGCTAACATTACCGCAGGACACTTATTAATACACCTAATCGGAGGAGCTACACTAGTACTAATAA---ATATTAGCCCACCAACAGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTCGCAGTAGCATTAATTCAAGCCTACGTATTCACCCTCCTAGTAAGCCTATATCTACATGATAATA +>Pantholops_hodgsonii_NC_007441 +------------AATGAACGAAAATCTATTTACCTCTTTCATTACCCCTAT---AATACTAGGTCTTCCTCTCGCCACCCTCATTGTTCTATTCCCCAGTCTACTATTTCCCACATCAAA---CCGACTAATCAACAACCGCCTCATTTCCCTTCAACAATGAATGCTTCAACTTGTGTCAAAACAAATAATAAGTATTCACAACATCAAGGGACAAACGTGAACATTAATACTAATATCCCTAATTCTATTTATTGGATCCACAAACCTGTTAGGCCTATTACCCCACTCATTCACCCCCACTACACAATTATCAATAAACCTAGGTATGGCTATCCCTCTGTGAGCAGGAGCTGTAATTACAGGTTTTCGCAACAAGACTAAAGCATCACTTGCCCACTTCCTACCACAAGGAACACCCACCCCGCTAATCCCAATACTAGTGATTATTGAAACTATCAGCCTCTTTATCCAACCAATAGCCCTTGCCGTACGACTGACAGCCAACATCACGGCAGGACATCTACTAATTCACTTAATCGGAGGAGCTACCCTTGCACTAATAAG---TATCAGCACTACAACAGCACTTATCACATTCATTATCCTAATCCTACTGACAATTCTTGAATTCGCAGTAGCTATAATTCAAGCCTACGTATTTACCCTCCTAGTCAGCCTATACCTGCACGATAACAC +>Lagorchestes_hirsutus_NC_008136 +------------ATGAACGAAAATCTATTTGCCCCATTCATCACCCCTACT---ATCCTAGGTATTACAACCCTGCCAATTATTATGCTCTTCCCATGTTTATTACTCACCTCTCCAAAA---CGTTGACTACCAAATCGCATTCAAATCCTCCAAATCTGACTAATCCGACTCATCACAAAACAAATAATAACAATTCACAATAAACAAGGACGATCCTGAACCCTCATACTAATATCTCTTATCTTATTTATTGCCTCTACAAACCTTCTAGGGTTACTACCATACTCCTTTACCCCTACTACGCAACTTTCCATGAACATTGGCATAGCCATTCCACTATGACTGGCCACTGTCCTAATAGGCTTTCGAAATAAACCTAAAGTATCATTAGCCCACTTTCTACCCCAAGGAACTCCTACACCACTGGTCCCAATGCTCGTCATTATTGAAACAATCAGCTTGTTCATTCAACCTGTAGCACTAGCAGTACGATTAACCGCTAATATCACCGCAGGTCACCTACTTATCCACCTAATTGGTTCCGCAACATTAGCACTATCCTCA---ATTAGCCTAACAGTATCAACCATCACATTTACCATTCTCTTCCTCCTAACAATTTTAGAACTAGCTGTAGCTATAATCCAAGCCTACGTCTTCACCCTACTAGTAAGCTTATATCTACATGACAATTCC +>Saimiri_boliviensis_boliviensis_NC_018096 +------------TAATGACCCAAAACTTATTCACCATCTTTAATATCCCAG---TAGTCCTAGGAATACCCCTAGCAGTACTAATTATTATATTTCCCTCCATACTAATCTTACCCCCTA---ACAACACTATCAACAACCGATTCTCATCCATTCAACAATGACTAGTCCAGCTCACACTAAAACAAATAATAATCACCCATTCTACTACAGGACGAACCTGATCTCTAATACTCCTAACCCTAATTACCTTTATTTCCTTAAATAACCTTCTTGGACTCACACCCTACGCATTTACACCCACCACTCAACTATCAATAAATATTGGTATAGCAATCCCACTATGAATAGCAACCGTACTTATAGGACTTCGACTTAAAACAAAAACATCCCTTGCTCACTTTCTGCCCCAAGGAACACCAACTCTACTCATTCCCATGCTCATCATCATTGAAACCATTAGCCTCTTTATTCAACCAGTAGCACTAGCAGTACGGCTAACAGCAAACATTACAGCAGGTCACCTACTAATACACCTATTAGGGACTGCTTCACTCACCCTTCTAT---CTATTTACCTCTCTTCCTCTCTAGCTACTATTATCGTCATTATCTTACTAATTACCCTAGAATTAGGCGTAGCCCTAATCCAAGCTTACGTCTTCACACTTCTAGTCAGTCTTTACCTACACAACAATT +>Phacochoerus_africanus_NC_008830 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTAC---GATAATAGGACTACCTATCGTTACCTTAATTATCATATTCCCTAGCCTATTATTCCCAACACCCAA---ACGACTTATTAACAACCGTATAATCTCCATTCAACAATGATTGACTCAACTAACATCCAAACAAATAATAGCCATCCATAATCAAAAAGGCCAAACCTGATCACTAATACTCATATCTCTAATCATATTTATTGGCTCAACAAACATCCTAGGTCTATTACCACACTCCTTCACACCCACTACACAACTATCAATAAACCTGGGCATAGCAATCCCCCTATGAGCAGCAACTGTATTCACAGGATTCCGTCATAAAACCAAGGCATCACTAGCCCACTTCCTACCACAAGGAACACCCGTTCCACTAATCCCCATGCTTGTAATCATCGAAACCATTAGCCTATTTATTCAACCAGTAGCCCTAGCCGTACGGCTAACAGCCAATATCACAGCAGGACATCTCCTAATTCACCTAATTGGAGGAGCTACTTTAGCATTACTCAA---TATCAACACTATAGTAGCCTCTATCACATTTATTATTCTAATCATACTAACCATTCTTGAATTCGCAGTAGCTCTAATTCAAGCCTATGTGTTCACACTACTAGTAAGCTTATATTTACATGATAATAC +>Papio_kindae_NC_020008 +------------ATGAACGAAAACCTATTTACCTCATTCTCAGCCCCAACA---ATCCTAGGACAACCAGCCGCAATCCCCATCATCATATTCCCCACACTACTAATCCCAACTTCTAAA---CATCTCATTAACAACCGACTAACCACCATTCAACAAAACCTCATCAAACTTATCCTAAAACAAATAATAGCACCCCACAACGCTAAAGGACAATCCTGATCTCTAATACTAATATCCTTGATCACCTTTATTACCATAACTAACCTCCTAGGGCTCCTACCTCACTCATTTACGCCAACCACCCAACTTTCTATAAACCTAGCCATAGCAATCCCCCTGTGGACAGGCACGATTATCACTGGTCTCCGCTTTAAAACTAAAAGCTCCCTAGCTCACATACTGCCACAAGGTACACCCACACCCCTCATTCCCATACTAGTAGTAATCGAAACCATTAGTCTACTTATCCAACCAATAGCCCTAGCCGTACGGCTGACTGCTAACATCACAGCCGGCCATCTATTAATACACCTAATCGGAAATACTATGCTAACACTATCAACC---ATCAACCTCTCCACCACCCTACTCACTTCTGTGCTCCTAACACTACTAACCGTCTTAGAAATCGCGGTTGCCCTAATCCAGGCCTACGTCTTCACACTCTTAGTCAACCTGTACCTACACAACAACACC +>Tonatia_saurophila_NC_022428 +------------TAATGAACGAAAATTTATTCTCCTCTTTCGTTACCCCAA---CTATAATAGGACTACCTATTGTCGTATTAATTATTATATTTCCCACCATACTATTTCCGTCTACCA---ACCGACTTATTAATAACCGACTAGTTGCCATCCAACAATGACTTATTTACTTAACATCAAAACAAATACTCTCCATTCACAACCAAAAAGGTCAAACATGAGCCTTAATATTAATATCTCTAATCCTATTCATTGGTTCTACAAACCTACTAGGCCTATTACCCCACTCATTTACCCCAACAACACAACTATCAATAAACCTAGGCATAGCCATCCCCCTATGAGCAGGCACCGTAATTCTAGGTTTCCGCCACAAAACCAAGGCCTCTTTAGCACACTTTCTACCACAAGGTACTCCACTACCCCTGATCCCTATACTAATTATCATCGAAACGATCAGTCTATTTATTCAACCAATAGCCCTAGCCGTACGACTAACTGCTAACATTACAGCTGGTCACCTATTAATTCATCTTATTGGAGGAGCAACACTTGCCCTAACTA---ATATCAACACAACTACTGCCCTAATTACATTTACAATTCTAATATTATTGACTATTCTAGAATTCGCCGTAGCTCTAATTCAAGCATACGTCTTCACTCTACTAGTCAGCCTATACTTACACGACAACA +>Mogera_wogura_NC_005035 +------------AATGAACGAAAATCTATTCGCCTCTTTCATTACCCCTAC---AATAATAGGTCTTCCTATTGTTATTTTAATTATTATATTTCCCAGCATTATATTTCCTGCACCTAA---CCGATTAGTCAATAATCGATTAATTTCCCTTCAGCAATGATTAATTCAACTAACATCAAAACAGATGATGTCTATTCATAACCCAAAAGGACAAACATGGGCCCTCATACTTATATCTCTAATTCTATTTATTGGCTCAACAAATTTACTAGGACTCCTACCACATTCTTTTACACCAACTACCCAACTTTCAATAAACCTCGGAATAGCCATCCCCCTATGAGCAGGTACTGTAATCACTGGTTTTCGACATAAAACAAAAGCATCACTAGCCCATTTCTTACCGCAAGGAACCCCATTACCATTAATTCCCATACTAATTATTATCGAAACTATCAGCCTATTTATTCAACCAATAGCACTAGCCGTACGACTCACAGCCAACATCACTGCAGGCCACCTACTAATTCACTTAATCGGAGGAGCCACACTAGCCCTAATGAG---TATTAGCACGGCCACAGCCTTCATTACATTTATTATCTTAGTATTATTAACTATTTTAGAATTTGCTGTAGCACTAATTCAAGCATATGTCTTCACACTATTAGTAAGCCTATACTTACATGACAATAC +>Enhydra_lutris_NC_009692 +------------ATGAACGAAAATCTATTTTCCTCTTTCATTACCCCTGTA---GTAATAGGACTTCCTATTGTTATCGCCATTGTAATATTCCCAAGTATTATATTCCCATCACCTAGT---CGACTAATCAACAACCGACTCATCTCTATTCAACAATGACTAGTACAACTAACATCAAAACAAATGTTGTCCATTCACAACCAAAAAGGACAAACCTGGGCATTAATATTAATATCCCTCATCTTATTTATTGGCTCCACCAACCTATTGGGCCTACTACCCCACTCATTTACCCCTACTACTCAATTATCCATAAACTTAGGAATGGCTATCCCCTTATGAGCAGGCACAGTAATTACTGGCTTCCGATACAAAACAAAAGCCTCCCTAGCCCATTTCTTACCACAAGGAACACCCATCCCCCTAATCCCCATACTTATTATCATCGAAACTATTAGTCTGTTCATCCAACCAATGGCTCTAGCTGTACGGCTAACAGCTAACATCACTGCAGGCCACTTATTAATCCACCTAATCGGGGGAGCTACCCTAGCCCTAATAAAC---ATTAGCACTATCACAGCAGCAGTAACCTTCATCATCCTTATCCTCTTGACCATCCTGGAATTTGCAGTAGCCCTTATTCAAGCCTATGTTTTCACTCTGCTAGTAAGCTTATACTTACATGATAATACT +>Galago_moholi_NC_021949 +------------TAATGAACCAAAACCTATTTGCCTCTTTCATTACCCCTA---CAATAATAGGCCTCCCTATTGTTATTCTAATCATTATGTTTCCTCTTATCCTATTCCCTGCTCCAA---CACGACTAGTTAATAACCGTCTCACATCAATACAACAATGACTAACTCAACTAATCCTAAAGCAACTCATAACCACCCATAATACAAAAGGTCGAACCTGATCACTCATACTTATTTCACTAATTATATTCATTGGATCAACTAATCTCCTCGGCCTACTTCCCCATACCTTTACTCCCACTACACAATTATCAATAAACCTTGGCATAGCTCTCCCCCTATGAACCGCAACAGTGCTCACAGGATTTCGTCACAAAACAAAAGCATCACTAGCCCATTTCCTGCCACAAGGGACCCCTCCTCCCCTCATCCCTATATTAGTCCTTATTGAAACTATCAGCCTCTTTATTCAACCTGTAGCCCTAGCCGTACGATTAACCGCCAACATTACAGCAGGACACCTTCTTATTCACTTAATTGGAGGAGCTACACTAGCACTTACAT---CAATTAGCCCTGCTACAGCTTCAATTACATTCACTATCTTAATCTTACTTTCAGCACTAGAACTCGCAGTAGCCCTTATCCAAGCATACGTATTCACATTATTAGTAAGCCTATACTTACATGACAACA +>Pudu_puda_isolate_M92144_NC_020740 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAAT---AATTTTAGGTTTTCCACTTGCTATCTTTATCGTTATTTTTCCTAGCCTACTGTTTCCAACATCAAA---CCGTCTAGTTAATAACCGTCTTATTTCTCTTCAACAATGAGTATTTCAACTTGTATCAAAACAAATAATAGGAATTCATAATACCAAAGGACAAACATGAACATTAATATTAATATCCCTCATTATATTTATTGGATCAACAAACCTATTAGGTCTGCTGCCCCACTCATTTACACCAACCACACAACTGTCAATAAATCTTGGTATAGCCATCCCCCTATGAGCAGGAACTGTAATTATAGGCTTCCGAAATAAAACCAAAGCATCACTTGCCCATTTTCTCCCACAAGGAACACCCACTCTACTAATCCCAATACTAGTTATTATTGAAACTATTAGCCTTTTCATTCAGCCAGTTGCCCTAGCTGTACGATTAACAGCTAACATTACTGCAGGGCACTTACTAATTCACCTAATTGGAGGAGCTACACTTGCACTAATAAA---TATTAGTACTACAATAGCCCTTATTACATTTATTATTCTAGTCCTACTTACAATTCTCGAGTTCGCAGTAGCTATAATTCAGGCCTATGTATTTACCCTCCTAGTAAGCCTCTACCTGCATGATAACAC +>Sus_scrofa_NC_000845 +------------ATGAACGAAAATCTATTTGCCTCTTTTATTGCCCCCACG---ATAATAGGACTACCTATTGTCACCTTAATTATTATATTCCCAAGCTTACTATTCCCAACACCCAAA---CGACTCATTAATAACCGCACAATCTCGATCCAACAATGATTAATCCAACTAACATCCAAACAAATAATAGCTATTCACAACCAAAAAGGCCAAACCTGATCACTAATACTTATATCTCTAATTATATTCATCGGCTCAACAAACATCCTAGGCCTACTACCACACTCATTCACACCCACCACACAACTATCAATAAACCTGGGTATAGCAATCCCCCTATGATCAGCAACCGTATTCACAGGATTCCGCTATAAAACCAAAACATCACTAGCCCACTTTCTACCACAAGGAACACCCGCCCTATTAATTCCTATGCTCGTAATTATTGAAACTATTAGCCTATTTATTCAACCAGTAGCCCTAGCCGTACGACTGACAGCCAACATTACAGCAGGGCACCTATTAATTCATCTAATTGGAGGGGCCACATTAGCACTACTCAAC---ATCAACACTATAACAGCTTTTATCACATTTACTATCCTCATTCTATTAACTATTCTTGAATTTGCAGTAGCTCTGATCCAAGCTTATGTGTTTACACTGCTAGTAAGCTTATACCTACACGACAATACA +>Isoodon_macrourus_NC_002746 +------------TAATGAACGAAAATTTATTTGCCCCATTCATCACCCCTA---CAATTATAGGTATTACAACCCTTCCCATCGTAATATTCTTTCCCTGCTTAATTCTCTCAACTCCCA---AACGTTGATTACCAAATCGAATTCAAACACTACAAATATGACTTATTCGTTTAATTACTAAACAAATAATAGTTATGCACAACGAACGAGGACGATCATGAACACTCATACTTATATCATTAATTTTATTTATTGCATCAACTAACCTTTTAGGCTTATTACCATACTCCTTTACTCCAACAACCCAATTATCAATAAATATTGGAATAGCCCTTCCTCTATGAATAGGCACTGTATTAATAGGATTCCGAAACAAGCCTAAAGCATCTCTAGCCCATTTTCTACCCCAAGGAACCCCTACCCCTTTAGTACCTATACTTATCATTATCGAAACCATTAGTCTATTTATTCAACCATTAGCCTTAGCTGTTCGACTTACTGCTAATATTACAGCAGGCCACCTATTAATTCACTTAATTGGCTCCGCCACCCTAGCATTAGCCT---CTATTAGTATCACAATTTCAACAATTACATTTATTATTCTTCTACTTCTAACTGTTTTAGAACTAGCCGTTGCCATAATTCAAGCATATGTATTTACACTTCTAGTTAGCCTATACTTACATGACAACT +>Sturnira_tildae_NC_022427 +------------AATGAACGAAAATTTATTCGCCTCTTTCATTACCCCTAC---GATAATAGGCCTTCCTATTGTTATTTTAATCATCATATTCCCTACTATAATATTTCCCTCAGCCAA---TCGACTAATTACCAACCGACTAGTAGCAATCCAACAATGACTTGTCCACCTAACATCCAAACAAATACTCTCCATTCACAATCACAAAGGCCAAACATGAGCTCTCATACTAATATCTCTCATCCTATTTATCGGCTCAACAAACCTACTAGGCCTACTACCCCACTCCTTCACTCCAACAACCCAACTATCAATAAACCTAGGCATGGCCATTCCCCTATGAGCTGGGACTGTTCTCCTAGGATTCCGCCACAAAACCAAAGCATCCCTTGCACACTTCCTACCACAAGGCACCCCCCTACCCCTAATCCCTATACTAATTATCATCGAAACAATTAGTCTATTCATCCAACCTATAGCACTAGCCGTACGACTAACCGCCAACATTACTGCCGGTCACCTACTCATCCACCTAATCGGAGGTGCAACCCTGGCCCTAATAAA---TATCAGCATAACAACCGCCCTCATTACATTCATAATCCTAATCCTACTAACCATTCTAGAATTTGCAGTTGCCCTAATTCAAGCTTACGTCTTTACACTACTAGTTAGCCTATACCTACATGACAATGC +>Nannospalax_galili_isolate_575_NC_020754 +------------ATGAACGAAAATCTATTTGCCTCTTTCGCTACCCCTACA---CTAATAGGCCTCCCCATTGTAATTCCCATCATTATATTCCCAACCCTATTTTTTAAAACAACAAAC---AAATTAATCAACAACCGAGTAACAACAGCCCAACAATGATTAATTAAACTTATTACCAAACAAATAATATTTACACACTCACCAAAAGGCCGCACATGATCTCTAATACTCACCTCACTCATCATCTTTATTGGATCTACAAACCTCCTAGGGCTGCTTCCCCATACATTTACCCCAACCACACAACTCTCAATAAACTTAGGCATAGCAATCCCAATGTGGGCAGGAGCTGTAATCCTAGGCTTCCGTTATAAAACAAAAGCATCACTAGCCCACTTCCTACCCCAAGGTACCCCTATTACCCTAATCCCAATACTAGTTATCATTGAAACAATTAGCCTATTCATTCAACCTATAGCACTAGCTGTACGTCTAACAGCTAACATCACAGCGGGACACCTACTAATTCATCTAATTGGAGGTGCTACACTAGTATTAACCACA---ATTAGCCTATCAACAGCCAGCATTACCTTCCTAATTCTAATAATACTTACCATCCTAGAACTTGCTGTAGCTATAATCCAAGCCTACGTATTTACCCTACTAGTTAGTCTATACCTACAAGACAACACA +>Macaca_silenus_NC_025221 +------------TAATGAACGAAAACCTGTTTACCCCATTCTCAACCCCAA---CAATTCTAAATCAACCCGCCACAATCCCCATTATCCTATTCCCCACCCTACTAGTCCTAACCTCTA---AGCACCCTATTAATAATCGACTGACAACCATTCAACAAAACCTGATTCAATTAGCCCTAAAACAAATAATGATAACCCATAATGCTAAAGGACTAACCTGGTCTCTAATACTAATATCTCTAATCACCTTTATCACTACAACAAACCTCCTAGGGCTTCTGCCCCATTCATTCACACCAACCACCCAACTCTCCATAAACCTAGCCATAGCAATCCCTCTATGAGCAGGCACAGTGATCATAGGACTTCGCTTTAAAACCAAAAATTCCCTAGCCCACCTTCTACCACAAAGTACACCCGCACCTCTCATTCCCATACTAGTGATAATCGAAACTATCAGCCTACTTATCCAACCGATAGCCCTAGCCGTACGACTAACTGCAAATATCACAGCTGGTCACCTACTAATACACCTAGTTGGAAACGCTGTACTAGCACTATCAA---CCATTAGCTTCCCCTTAACTCTACTAACTTCTATACTCCTAACATTACTAACTATTCTAGAGATTGCAGTAGCCCTAATCCAAGCCTACATCTTCACACTCCTAATTAGCCTCTACCTACACAACAACA +>Cervus_elaphus_songaricus_NC_014703 +------------AATGAACGAAAATTTATTTGCCTCTTTCATTACCCCAAT---AATCCTAGGCCTTCCACTAGCTACTCTCATCGTTATGTTTCCTAGCCTATTGTTTCCAACATCAAA---TCGTCTAGTAAATAACCGTCTTATTTCCCTCCAACAATGGATACTTCAACTTGTATCAAAACAAATAATAGGAATTCACAATACCAAAGGACAAACATGAACACTAATACTCATATCTCTAATCTTATTTATTGGATCCACAAATCTTCTGGGCTTATTACCCCACTCATTTACACCAACTACACAATTATCAATAAACCTAGGCATAGCCATTCCCCTGTGAGCAGGAGCTGTAATCACAGGCTTCCGTAACAAAACTAAAGCATCGCTTGCCCACTTTCTTCCACAAGGAACTCCAACCCCATTAATTCCCATACTAGTTATTATCGAAACTATTAGTCTTTTTATTCAGCCAATCGCTTTAGCCGTACGACTAACAGCCAATATTACTGCAGGACACCTACTAATTCACCTAATTGGAGGAGCTGCACTTGCACTAATAAG---CATCAGTACTACAACAGCTCTTATCACATTTATTATTCTAGTCCTACTCACAATCCTTGAGTTTGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTTCTAGTCAGCCTTTACTTGCATGACAACAC +>Nycticebus_bengalensis_NC_022195 +------------ATGGACCAAAACTTATTTGCCTCATTCATTACCCCTACA---ATAGCTGGCCTGCCCATTGTAATTTTTATTGTAATATTCCCATACATTATAATCTCAGCCCCTACA---CGATTAATTAGCAACCGAATAACCTCTATACAACAATGACTTATTCAGCTAATCTTAAAACAACTAATAGTGACTCACAATACAAAAGGACGAACTTGATCATTAATGCTTATCTCACTTATCATTTTTATCGGTTCAACTAATCTACTAGGTCTACTACCCCACACTTTTACACCAACAACCCAGCTTTCAATGAATCTCGCTATAGCTATCCCACTATGAGCAGCTACTGTAATTACAGGCTTCCGACACAAAACCAAAGCGTCCCTAGCACACTTCCTGCCCCAGGGAACCCCTCCCTTGCTAATCCCCATACTAGTCCTTATCGAAACCATTAGCCTCTTAATTCAACCTATGGCCCTAGCCGTGCGACTAACAGCTAACATCACAGCAGGACATCTCCTTATACACCTTATCGGAGGCGCTACACTAGCAATTTCATCA---ATTAGCTCAGTCGCGGCCTCAATCACATTTATCATCCTCATCCTACTATCAATCCTAGAGTTCGCAGTAGCTCTTATCCAGGCATACGTATTTACACTGCTAGTCAGCCTTTACCTACACGACAATACA +>Rhinoceros_sondaicus_NC_012683 +------------TAATGAACGAAAATTTATTCGCCTCTTTCACTACCCCAA---CAATAATAGGACTACCTATTGTTATCCTAATTATCATATTCCCCTGCATCATATTCCCCTCATCCA---ACCGACTAGTCAACAATCGCCTAATCTCAATTCAACAATGACTACTTCAACTAACATCAAAACAAATGATATCTATCCATAATAACAAAGGCCAAACCTGAGCACTAATACTTATATCCCTTATCCTATTTATTGGCTCAACCAATCTACTAGGCCTGTTACCCCACTCATTCACACCCACCACTCAACTGTCAATAAACCTGGGCATGGCCATTCCCCTGTGAACAGGAACAGTATTAGTAGGCTTCCGCTATAAAACCAAAGCATCTCTAGCCCATTTCCTTCCACAAGGAACACCCATTTTTCTTATTCCAATACTAGTAATTATCGAAACCATCAGCCTATTTATTCAACCCGTGGCCCTAGCCGTACGATTAACAGCCAACATTACCGCAGGACACCTCCTAATACACTTAATTGGAGGAGCAACACTAGCCCTAATAA---ACATTAGCCCAACTACAGCCCTCATCACATTTATTATTCTCGTCCTACTTATCATTCTCGAATTCGCTGTAGCTCTAATTCAAGCCTACGTATTCACCCTTCTAGTAAGCCTGTACTTACACGACAACA +>Ovibos_moschatus_NC_020631 +------------AATGAACGAAAATTTATTTGCCTCTTTCATTACCCCTAT---AATTTTAGGCCTCCCCCTTGTTACCCTCATTGTTCTATTCCCCAGCCTACTGTTCCCTACATCAAA---CCGATTGATTAATAATCGCCTCATCTCCCTCCAACAATGAATACTTCAACTCGTATCAAAACAAATAATAAGTATTCATAACATTAAAGGACAAACATGAACACTAATACTAATATCCCTAATTCTATTCATTGGGTCTACAAATTTACTAGGTCTATTGCCCCACTCATTTACACCAACAACACAACTATCAATAAACTTAGGCATGGCTATCCCCCTATGAGCAGGGGCCGTAATCACGGGCTTTCGCAACAAAACCAAAGCATCACTTGCCCACTTCCTACCACAAGGAACACCAACCCCCCTAATCCCAATACTAGTAATCATCGAAACCATCAGTCTCTTTATCCAACCAATGGCTCTCGCCGTACGACTAACGGCCAACATCACAGCAGGCCATTTATTAATTCACTTAATTGGAGGAGCCACTCTTGCACTAATAAA---TATCAGCACCACAACAGCATTCATTACATTTATTATCTTAATCCTACTAACAATTCTAGAATTCGCGGTAGCTATAATTCAAGCCTACGTATTTACCCTCCTAGTTAGCCTATACTTGCATGACAACAC +>Cervus_elaphus_yarkandensis_NC_013840 +------------ATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAATA---ATTCTAGGCCTTCCACTAGCTACTCTCATCGTTATGTTTCCTAGCCTATTATTTCCAACATCAAAT---CGTCTAATAAATAACCGTCTTATTTCCCTCCAACAATGGATACTTCAACTTGTATCGAAACAAATAATAGGAATTCACAACACCAAAGGACAAACATGAACACTAATACTCATGTCTCTAATCTTGTTTATTGGGTCTACTAATCTTCTGGGCTTATTACCCCACTCATTTACACCAACCACACAATTATCAATAAACCTAGGCATAGCCATTCCCCTGTGAGCAGGAGCTGTAGTTACAGGTTTCCGCAATAAAACTAAAGCAACACTCGCTCACTTTCTTCCACAAGGAACTCCAACCCCATTAATTCCCATACTAGTTATCATCGAAACTATTAGTCTTTTTATTCAACCAATTGCCTTAGCCGTACGACTAACAGCTAACATTACTGCAGGACACCTACTAATTCACCTAATTGGAGGAGCTGCGCTTGCACTAATAAGT---ATCAGTGCTACAATAGCCCTTATCACATTCATTATTCTAGTCTTACTTACAATCCTTGAATTTGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTTCTAGTTAGCCTTTATTTGCATGATAACACA +>Scapanulus_oweni_voucher_SAF_QL120129_NC_025777 +------------TAATGAACGAAAATTTATTCGCCTCTTTCATTACCCCTA---CAATAATAGGTCTACCTATCGTTATTTTAATCATTATATTCCCAAGCATAATATTTCCTACACCTA---ATCGACTAATTAATAATCGTTTAGTATCAATTCAACAATGACTAGTTCAACTAACTTCTAAGCAAATAATAGCGATTCACAACACAAAAGGACAAACATGGGCCCTCATACTTATGTCTCTAATCCTATTCATTGGGTCTACAAACTTACTAGGCCTCTTACCCCACTCATTTACTCCTACTACCCAACTATCCATAAACTTAGGAATAGCTATCCCCCTCTGAGCCGGTACAGTCATTACAGGATTTCGATACAAAACAAAAGCATCCCTAGCTCACTTCTTACCCCAAGGAACTCCTCTCCCACTAGTTCCAATACTTATTATTATTGAAACTATTAGCCTTTTCATTCAACCTATAGCATTAGCCGTTCGACTCACAGCCAACATTACCGCAGGGCATCTGCTTATCCACCTAATTGGAGGAGCAACCCTAGCTCTAATGA---GTATTAGTACAGCAACAGCTCTCATTACATTCATTATCTTAGTGTTACTAACCATTCTAGAATTCGCAGTAGCCCTAATTCAAGCATATGTCTTCACACTCCTGGTAAGCCTATATTTACATGATAATA +>Daubentonia_madagascariensis_NC_010299 +------------AATGAACGAAAATTTATTCGCCTCTTTCATTACCCCTAC---AATCATAGGTCTACCCATTGTTATATTAATCACTATGTTACCCTCCATACTATTCCCCACACCCTC---TCACTTTATCAATAATCGACTAATTTCCCTGCAACAACGATTTACCCAACTAATTCTAAAACAACTAATAGCAACACATAATACCAAAGGACGAACTTGATCCCTAATGTTAACCTCACTAATCCTATTTATCGGGTCAACAAACCTACTAGGCCTACTACCCTACTCGTTCACACCAACAACCCAACTATCAATGAACTTAGGAATAGCAATCCCACTATGAGCAGCCACAGTCATTACAGGCTTCCGCCACAAAACAAAATCATCATTCGCCCATTTCCTGCCACAAGGAACCCCCACTCCACTGATTCCTATATTAGTAATCATCGAAACTATCAGTCTTTTTATTCAACCAATAGCCCTAGCCGTACGATTAACAGCTAATATTACAGCCGGCCACCTTCTCATACACCTAATTGGAAGTGCTACTCTAATCCTCACATC---AATCAGCCCCGCTGCAGCTTCAATTACATTTATTATCCTAGTTTCACTTACCACCCTCGAACTCGCTGTCGCCCTCATCCAAGCCTACGTATTCACCCTATTAATCAGCCTTTACCTACACGAAAACAC +>Stenella_coeruleoalba_NC_012053 +------------ATGAACGAAAATCTATTTGCCTCTTTCATAATCCCAGTT---ATACTAGGTATTCCCATTACTACCCTAATTATTATATTTCCCACCATGCTATTTCCAACACCAAAT---CGATTAATCAATAACCGCATGGTCGCTATCCAACAATGACTTACTAAACTCACATCAAAACAACTAATAATTACACATAGCCCCAAAGGACAAACCTGATCCCTAATACTCATCTCACTTTTCCTTTTCATCGCTTCCACAAATCTTCTTGGAATATTACCTCACTCATTCACACCTACTACTCAACTCTCTATAAATTTAGGCATAGCTATTCCATTATGAGCTGGCACCGTCTTTATCGGCTTCCGTAATAAGACAAAAATATCTCTAGCTCACCTTTTACCACTAGGCACACCCACTTTCCTAATTCCTATATTAGTAATAATCGAAACTATTAGCCTATTTATTCAACCCATAGCCCTAGCAGTACGGCTGACAGCGAATATCACAGCAGGTCACCTACTACTACATCTAATTGGAAGCGCAACCCTTGCATTAATAAAC---ATTAGTCTATTCACAGCTCTCATCACATTTATTATTCTCACCCTATTAATCATCCTTGAATTCGCTGTAGCTCTGATCCAAGCCTACGTATTCACCCTACTAGTAAGCCTATACTTGCAAGACAATACA +>Pteromys_volans_NC_019612 +------------TAATGAACGAAAATCTATTTGCCTCATTCATTACCCCTA---CATTAATAGGACTCCCCGTAATTATCTTAATCATCTCCTTCCCTAACATTCTATTCCCCTCACCTA---ACCGACTTGTTAATAACCGACTAGTGTCTTTCCAACAATGATTAATTCAACTTGTACTAAAACAAATAATGGCAATACACAATTTAAAAGGACGAACCTGGTCCCTCATACTTATTTCCCTAATTATATTTATTGGGTCTACCAATTTATTAGGCCTCCTCCCACACTCCTTTACCCCCACAACTCAACTATCCATAAACTTAGGCATGGCCATTCCATTATGAGCAGGAGCAGTGATTACTGGCTTTCGTCATAAAACTAAAGCCTCACTAGCCCACTTCCTTCCTCAAGGAACACCAGTTCCTCTTATCCCAATACTTATTATCATTGAAACCATCAGCCTTTTTATTCAACCTATAGCCCTAGCTGTCCGTCTGACCGCCAATATTACAGCTGGTCACCTACTTATGCACCTTATTGGAGGAGCTACCTTAGTCTTAACTT---CCATTAGCCCCCCTACTGCAATAATCACTTTTATTATTCTAATTTTATTAACAGTCCTTGAATTCGCTGTAGCCCTAATTCAAGCATACGTTTTCACTTTACTTGTAAGTCTATATCTACATGATAATA +>Sorex_tundrensis_NC_025327 +------------AATGAACGAAAATTTATTCGCCTCTTTCGCTACCCCAAC---AATAATGGGTCTCCCTATTGTCGTCCTAATTATTCTATTCCCCAGCATTATATTCCCAGCCCCCAA---CCGATTAATTAATAACCGATTAGTCTCTCTTCAACAATGACTAATTCAGCTAACCTCAAAACAAATAATAGCAATTCACAATCAAAAAGGACAAACATGGACTCTCATACTAATATCACTAATTCTATTCATTGGCTCTACTAACCTACTAGGTCTTCTACCACATTCTTTTACACCAACAACACAACTTTCAATAAATTTAGGGATGGCTATCCCTCTATGAGCTGGAACAGTCATTACAGGGTTCCGGTACAAAACAAAAGCATCTTTAGCCCACTTCCTACCCCAAGGTACCCCACTACCACTGATCCCAATACTTATTATCATCGAGACTATCAGTCTATTTATTCAACCAATAGCATTAGCTGTACGGTTAACTGCAAATATTACAGCTGGCCACCTATTAATCCACCTAATTGGAGGCGCAACTCTAGTTCTAATAAG---CATTAGCCCAATTACAGCATTTATTACTTTCATTATTTTAGTAATGCTTACAGTACTTGAATTTGCCGTAGCGTTAATTCAAGCTTATGTCTTTACCCTCTTAGTAAGCCTCTATCTGCACGATAATAC +>Damaliscus_lunatus_NC_023543 +------------ATGAACGAAAATCTGTTTGCCTCTTTCATTACCCCTATA---ATACTAGGCCTCCCCATTGTTACTCTCATCGTCCTATTTCCTAGCCTGCTATTTCCTACATCAAAC---CGACTAATCAACAACCGCCTCATCTCCCTCCAGCAATGAATACTTCAACTCGTATCGAAACAAATAATGAGCATTCACAACACCAAAGGACAAACATGAGCACTAATATTAATGTCCCTAATTCTATTTATTGGGTCTACGAACCTCCTAGGTCTACTACCCCACTCATTCACACCAACCACACAACTATCAATAAACTTGGGTATAGCAATCCCCCTGTGAGCAGGGGCAGTAATTACAGGCTTCCGCAACAAGACCAAAGCATCACTTGCCCACTTCCTACCACAAGGAACACCAACCCCACTAATTCCAATGCTAGTAATTATCGAAACCATCAGCCTTTTCATCCAACCAATAGCCCTCGCTGTGCGACTGACAGCCAACATCACAGCAGGGCATCTGTTAATTCACTTAATCGGAGGAGCCACCCTTGCCCTAATGAAC---ATCAGTACTACAACGGCCCTCATTACCTTCATTATTCTAATCCTACTAACAGTCCTCGAATTCGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTTTTAGTCAGCCTGTACTTGCACGATAACACA +>Pusa_hispida_NC_008433 +------------TAATGAACGAAAATCTATTCGCCTCTTTCACTACCCCTA---CAATAATAGGTCTTCCTGTCGTAATCCTAATTGTATTATTCCCAAGCATCCTATTTCCATCCCCTG---ACCGACTAATCAATAATCGCCTCGCCTCGATTCAACAATGATTAATCCAATTAACATCAAAACAAATGTTATCAATCCATAACCATAAAGGACAGACATGAGCACTTATGCTTATTTCACTTATTCTATTTATTGGATCCACTAACCTGCTAGGCCTCCTACCACACTCATTCACCCCTACCACCCAACTATCCATAAACCTAGGAATGGCTATTCCCCTATGAGCAGGAACAGTCATCACAGGTTTTCGACACAAAACAAAAGCATCCCTAGCCCACTTCCTACCCCAAGGAACACCTCTACCCCTCATTCCAATACTAGTGATCATCGAGACTATTAGCCTATTCATTCAACCCATAGCCTTAGCCGTACGACTAACAGCCAATATTACTGCAGGTCACCTACTAATTCACCTAATCGGAGGAGCTACCCTCGCCCTTATGA---ACATTAGCACCACTACAGCATTCATTACTTTCATCATCCTTATCCTGCTCACCATCCTTGAATTTGCTGTAGCCCTTATTCAAGCTTATGTCTTCACACTGCTAGTAAGCTTATATCTACATGACAATA +>Tursiops_australis_isolate_SABD1_NC_022805 +------------AATGAACGAAAATCTATTTGCCTCTTTCATAGTCCCAGT---CATACTAGGCTTTCCCATTACTACTCTAATTATCATATTTCCCACCATGCTATTTCCAACACCAAA---TCGATTAATCAATAACCGCATAATCGCTATCCAACAATGACTTACCAAACTCACATCAAAACAACTAATAATTACACATAGCCCCAAAGGACAAACCTGATCCCTAATACTCATCTCACTTTTCCTTTTCATCGCTTCCACAAACCTTCTTGGAATATTACCTCACTCATTCACACCAACCACTCAACTCTCTATAAATTTAGGCATAGCTATTCCATTATGAGCTGGCACCGTTTTTATCGGTTTCCGTAACAAGACAAAAATATCCCTAGCTCACCTTTTACCATTAGGCACACCCACTTTCCTAATTCCTATACTGGTAATAATCGAGACTATTAGCCTATTTATTCAACCCTTGGCCCTAGCAGTACGGCTGACAGCGAATATTACAGCAGGCCACCTACTACTACATCTAATTGGAAGCGCAACCCTTGCATTAATAAG---CATTAGTCTATTCACAGCTCTCATCACATTTATTATTCTCACCCTATTAATCATCCTCGAATTCGCTGTGGCTCTAATCCAAGCCTATGTATTCACCCTACTAGTAAGCCTATACTTGCAAGACAATAC +>Microtus_fortis_calamorum_NC_015243 +------------ATGAACGAAAATCTATTCTCCTCTTTCATTACCCCAACA---ATAATAGGCCTCCCTATCGTTGTCCTTATCATTATACTCCCCTCTGCGCTCTTAACTTCTTCCAAA---CGACTTATCCCAAATCGCTTCCACTCATTCCAATTATGACTAATCAAACTTATTACCAAACAAATAATGTTAATCCACTCACCCAAAGGACGCACATGATCACTAATACTAGCATCTTTAATTATATTCATTGGCTCAACCAATCTCCTAGGCCTCTTACCACACACATTCACCCCAACAACACAATTATCAATAAACTTAGGAATAGCTATTCCATTATGAGCTGGAGCCGTAATTCTAGGCTTCCGCCACAAACTAAAATCCTCACTAGCCCACTTCTTACCCCAAGGCACACCCATCTCCCTAATCCCTATACTAATTATCATCGAAACTATCAGCCTATTCATCCAACCTATGGCCCTCGCAGTCCGTTTAACAGCTAACATTACCGCAGGCCACCTATTAATCCACTTAATCGGAGGGGCCACACTAGTCCTCACAAGC---ATCAGCCCACCAGCGGCCACAATTACATTTATTATCTTAGCCCTCCTCACCATCCTAGAATTTGCTGTAGCCCTAATTCAAGCTTACGTATTCACCCTACTAGTAAGCCTTTACCTACATGATAACACC +>Cephalophus_nigrifrons_isolate_GLC20_NC_020691 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTA---TAATACTAGGCTTGCCCCTCGTTACTCTTATTGTCCTATTCCCCAGYCTACTATTCCCAACATCAA---ATCGACTAATTAAYAATCGCCTCATTTCCCTTCAACAATGACTACTCCAACTCATCTCAAAACAAATAATAAGCATCCATAATCCTAAGGGACAGACATGAGCACTAATACTAATATCCCTAATTCTATTTATTGGCTCAACAAACCTACTAGGACTACTACCCCACTCATTTACACCAACCACACAACTATCAATAAATCTAGGCATGGCCATTCCTCTGTGGGCCGGAGCTGTTGTCACAGGCTTCCGTAATAAAACTAAAGCATCACTCGCCCATTTTCTGCCACAAGGTACACCAACCCCATTAATCCCAATACTAGTGATTATTGAGACTATTAGCCTCTTCATCCAACCAGTAGCCCTTGCTGTTCGACTGACAGCCAATATCACAGCAGGGCACCTACTAATTCACCTAATCGGAGGAGCCACACTTGCGCTAATAA---GCATTAGCACCACAACAGCTCTTATTACATTTATTATTCTAGTCTTACTAACAGTTCTCGAATTCGCAGTGGCCTTAATTCAAGCTTATGTATTCACCCTCCTAGTCAGCCTATACCTGCACGACAACA +>Moschus_chrysogaster_NC_020093 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAAT---AATTCTAGGCCTTCCCCTCGCTACTCTCATTATCATATTCCCCAGCCTATTATTCCCAACATCAAA---TCGATTAATCAACAATCGTCTCCTCTCCCTTCAACAATGAATACTTCAACTTGTATCAAAACAAATAATGGGAATTCACAACACTAAAGGACAAACATGGACACTTATACTAATATCTCTAATCCTATTTATTGGCTCAACAAATCTACTAGGCCTACTTCCCCACTCATTCACACCAACTACACAACTATCAATAAATCTAGGCATGGCTATCCCCTTATGGGCGGGCGCTGTAATTACAGGATTCCGTAACAAAACTAAAGCATCCCTTGCTCACTTCCTACCACAAGGAACACCTACTCCACTAATCCCAATGCTAGTAATTATCGAAACTATTAGCCTCTTTATTCAACCAATAGCCTTAGCAGTACGATTAACAGCTAATATTACTGCAGGACACCTGTTAATTCACCTAATTGGAGGGGCCACACTTGCACTAATAAA---TATCAGCACCACAACAGCCCTCATCACATTCATTATCCTGATCCTGCTCACAATTCTCGAGTTTGCAGTAGCCATAATCCAAGCTTACGTATTTACTCTTCTAGTTAGTCTATACCTGCATGATAATAC +>Callicebus_lugens_NC_024630 +------------ATGAACCAAAATCTATTTGCCTCATTCAACATTCCAATA---ATACTAGGAATCCCCCTAGCTACTTTTATTATTCTATTTCCTACCCTACTAATTATTCCCTCCAAC---AAACTAATAAGTAATCGATTCACTTCACTCCAACAATGGTTAATTCAACTAACACTAAAACAGTTAATACTAAGTCACAGCACTAAAGGACGAACCTGATCTCTTATACTTTTAGCGCTAATTACCTTTATTGCTCTCAACAATCTCCTTGGACTTACACCCTATGCATTTACACCAACCACTCAACTATCTATAAATATTGGAATAGCAATTCCCCTATGAGCAGCTACAGTAATTATAGGATTTCGATTTAAAACAAAATCATCTTTAGCCCACTTTCTACCTCAAGGGACACCAATTCCTCTCATCCCAATATTAGTAATTATTGAGACAATTAGTCTCCTCATTCAACCCATAGCACTAGCTGTGCGCCTAACAGCCAATATCACAGCAGGACACTTACTAATACACTTACTTGGGGACACCGCACTAACTCTCCTCTCT---TTATACTTCTCCTCTTCTATTATCACTATTATTGTTATTATTCTTCTAATTACCCTAGAACTAGGTGTAGCACTAATTCAAGCCTACGTCTTTACACTCCTAGTAAGCCTCTACTTACATGATAATTCC +>Rhinopithecus_bieti_NC_015486 +------------TAATGAACGAAAATTTATTTACCCCATTTATAACCCCAA---CGCTCCTAGGCTTACCCGCTGTAGTACCTATCATTCTATTCCCTACATTATTATTTCCAACCTCCA---AGCACCTTATTAGTAATCGACTAATTACTATCCAACAAAATCTAATCCAACTAATTATAAAACAAATAATAATAATTCACAATGCCAAAGGACAAACCTGATCCCTAATACTCATGTCCCTAATTATTTTTATTGCTACAACAAATCTTCTAGGACTCTTACCCCACTCATTTACCCCCACCACTCAACTGTCCATAAATCTAGCTATAGCAATTCCCCTGTGAGCAGGTACAGTAATTACAGGTCTTCGCTTCAAAACCAAAAACTCCCTAGCTCACTTTTTACCACAAGGCACACCTACACCTCTTATTCCCATATTAGTAGTTATCGAAACTATTAGCTTATTTATTCAACCAATAGCCCTAGCCGTACGCCTGACCGCCAACATCACAGCAGGACACCTACTAATACACCTAATCGGAAGTGCTACACTAGCACTATTAA---CTGCTAGTTTCCTTGCAACCTCACTGACTTTAGTACTCCTAGTATTATTAACAATCCTAGAAATAGCAGTTGCCCTAATCCAGGCCTACGTTTTTACACTCTTAGTAAGCCTTTATCTACATGATAATA +>Philantomba_maxwellii_isolate_E11_9_NC_020735 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTAT---AATTCTAGGTCTCCCCCTTGTTACTCTCATTGTCCTATTTCCTAGCCTGCTATTCCCAACATCAAA---CCGACTAGTAAATAACCGCCTCGTTTCCCTTCAACAATGACTACTCCAACTTATCTCAAAGCAAATGATAAGCATCCATAACCCTAAAGGACAAACATGAGCATTAATATTAATATCTCTGATCCTATTCATTGGGTCAACAAACCTACTAGGCCTATTACCCCACTCATTTACACCAACCACACAACTATCAATAAACTTAGGCATAGCTATCCCTCTGTGAGCAGGAGCCGTTATCACAGGCTTTCGTAACAAAACCAAAGCATCACTTGCCCACTTCCTACCACAAGGAACACCAACCCCATTAATCCCAATGCTAGTAATTATTGAAACTATTAGCCTTTTTATTCAACCGGTAGCCCTTGCTGTACGACTAACAGCCAACATTACAGCAGGACACCTATTAATCCACTTAATCGGAGGGGCCACACTCGCACTAATAAG---TATTAGTACCACAACAGCCCTCATTACATTTATCATTTTAGTCCTACTAACAATTCTTGAATTTGCAGTAGCCATAATCCAAGCCTACGTATTTACTCTCCTAGTAAGCCTATACCTGCACGACAACAC +>Cervus_nippon_sichuanicus_NC_018595 +------------ATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAATA---ATACTAGGCCTTCCACTAGCTACTCTTATCGTTATATTTCCTAGCCTATTATTTCCAACATCAAAT---CGCCTAGTAAATAACCGTCTTATTTCCCTCCAACAATGGATACTTCAACTTGTATCAAAACAAATAATAGGAATTCACAATGCCAAAGGACAAACATGAACATTAATACTCATGTCTCTAATCTTATTTATTGGATCCACAAATCTTCTGGGCTTATTACCCCATTCATTTACACCAACCACACAACTATCAATAAACCTAGGCATAGCCATTCCCCTGTGAGCAGGAGCTGTAATTACAGGTTTCCGTAATAAAACTAAAGCATCGCTTGCTCACTTTCTTCCACAAGGAACTCCAACCCCACTAATCCCCATACTAGTTATTATCGAAACTATTAGTCTTTTTATTCAACCAATCGCTTTAGCCGTACGACTAACAGCCAATATTACTGCAGGACACCTACTAATACACCTAATTGGAGGAGCTGCACTTGCACTAATAAAT---ATCAGCACTACAATAGCTTTTATCACATTCATTATTCTAGTCCTACTCACAATCCTTGAGTTTGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTTCTAGTCAGCCTTTACTTGCATGACAACACA +>Naemorhedus_griseus_isolate_T260_NC_020723 +------------TAATGAACGAAAATTTATTTACCTCTTTCGTTACCCCTG---TAATACTAGGCCTTCCCCTTGTTACCTTTATTGTCCTATTTCCTAGCCTATTATTTCCCACATCAA---ACCGGTTGATTAGTAACCGCCTCATCTCCCTCCAACAATGAATACTTCAACTCGTGTCAAAACAAATGATAAGTATTCACAACATTAAAGGACAAACATGGACATTAATACTAATGTCCCTAATTTTATTCATTGGGTCTACAAATTTATTGGGCCTATTACCCCACTCATTTACACCAACAACACAACTATCAATAAACTTAGGCATGGCTATTCCCCTATGAGCAGGGACCGTAATTACAGGCTTTCGCAACAAGACCAAAGCATCACTTGCCCACCTTCTACCACAAGGAACACCAACTCCACTAATCCCAATGCTAGTAATTATCGAAACCATCAGCCTCTTCATCCAACCAATAGCCCTTGCCGTACGACTAACAGCCAATATCACAGCAGGACATTTATTAATTCACTTAATTGGAGGAGCCACTTTTGCACTAATAA---ATATTAATATCACAGCAGCATCCATTACATTCATTGTCCTAGTCCTACTGACAATCCTAGAATTCGCAGTAGCTATAATTCAAGCCTACGTATTTACCCTTTTAGTTAGCTTATACCTGCATGATAACA +>Canis_lupus_familiaris_NC_002008 +------------AATGAACGAAAATCTATTCGCTTCTTTCGCTGCCCCCTC---AATAATAGGTCTCCCTATTGTGGTACTGATCGTCATATTCCCTTCCATTTTATTCCCAACACCCAG---TCGCCTAATCAATAATCGGTTAATCTCCATTCAGCAATGACTAATTCAACTAACATCAAAACAAATACTAGCAATTCATAACCAAAAGGGACGAACCTGAGCTCTCATACTTATATCACTAATTCTATTTATTGGCTCAACTAATCTACTTGGACTATTACCTCACTCATTTACGCCCACAACACAACTCTCTATAAACCTCGGAATAGCAATTCCCCTATGAGCAGGGACAGTAATTACCGGTTTCCGCTATAAAACCAAAGCATCCTTAGCACACTTTCTACCCCAAGGCACCCCTCTCCCCCTAATTCCAATACTAGTAGTCATCGAAACTATTAGTCTATTTATTCAACCCATGGCTCTAGCCGTTCGATTAACCGCCAATATTACTGCAGGACACCTCCTAATCCATTTGATTGGAGGGGCTACCTTAGCTCTTATCAA---TATTAGCGCGACCACAGCTTTTATCACTTTTATTATTCTAATCCTACTTACGATCCTAGAATTTGCTGTTGCCTTAATTCAAGCCTATGTTTTTACCTTACTAGTGAGTCTATACTTACATGACAACAC +>Desmodus_rotundus_NC_022423 +------------ATGAACGAAAACCTATTCGCCTCTTTCATTACCCCTGTA---ATAGCAGGACTGCCCATCGTCACCGCGATCATCATATTCCCTACCCTCCTATTCCCGTCAACGGGC---CGACTGGTTAATAACCGTCTAGTGGCCATCCAACAGTGACTCCTCCGCCTGACAGCCAAACAAATACTCTCTCTACACAACCCTAAGGCCCAAACATGAGCCCTTATATTAATATCCCTGATCATATTCATTGGCTCAACAAACCTCCTAGGACTACTGCCCTACTCATTCACCCCTACAACACAACTATCAACCAACCTCAGCATGGCCATTCCCCTATGGGCAGGAACCGTTATCTTAGGTTTCCGACGTAAGACTAAGACATCCTTAGCACATTTCCTACCCCAAGGAACCCCTCTGACCTTAATCCCGATACTAGTAATTATTGAAACAATCAGCCTATTCATCCAACCAATAGCGCTGGCCGTACGCTTAACTGCCAACATCACTGCCGGACACCTGTTAATTCACCTAATCGGAGGGGCAACCCTAGCCCTAATAGAC---ATCAACATATCCGTCAGCTTCATCACATTCGTAATCCTAGTGCTCCTGACAATCCTAGAATTTGCTGTGGCCCTGATCCAAGCCTATGTCTTCACTCTGCTAGTTAGCTTATACCTACATGACAACACT +>Przewalskium_albirostris_NC_016707 +------------TAATGAACGAAAATTTATTTGCCTCTTTTATTGCCCCAA---TAATCCTAGGCCTTCCACTAGCTACCCTCATCGTTATGTTTCCTAGCCTATTATTTCCAACATCAA---ATCGTCTAGTAAATAATCGCCTTATTTCCCTCCAACAATGGATACTTCAACTTGTATCAAAACAAATAATAGGAATTCACAATGCCAAAGGACAAACATGAACACTAATACTCATATCTCTAATCTTATTTATTGGATCCACAAATCTTCTGGGCCTATTACCCCACTCATTTACACCAACCACACAGTTATCAATAAATCTAGGCATAGCCATTCCCCTATGAGCAGGAGCCGTAGTTACAGGTTTCCGCAATAAAACTAAAGCATCACTTGCTCACTTTCTTCCACAAGGAACTCCAACCCCATTAATTCCTATACTAGTTATCATCGAAACTATTAGTCTTTTTATTCAACCAATCGCCTTAGCCGTACGACTAACAGCTAATATTACTGCAGGACATTTACTAATTCACCTAATTGGAGGGGCTGCACTTGCACTAATAA---GTATCAGTACTACAATAGCTCTTATCACATTTATTATTCTAGTCCTACTCACAATCCTTGAGTTTGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTTCTAGTTAGCCTTTACTTGCATGACAACA +>Chalinolobus_tuberculatus_NC_002626 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAAC---ACTAATAGGTCTGCCTATTGTTATTGCTATCATCATGTTCCCTAGTATATTTTTCCCATCAACAAC---TCGTCTAATTAGTAACCGCTTAATCGCTATACAAAAATGAATTATCCGCCTTATTACAAAACAAATAATAGTTATCCATACTAAAAAGGGTCAGACCTGAGCTCTAATGCTGGTATCACTAATTATATTCATTGGGTCTACAAATCTAATAGGACTATTGCCCCACTCATTCACTCCAACCACTCAACTATCCATGAACCTAGGAATAGCCATTCCTCTCTGAGCAGGTACAGTTATCTTAGGATTCCGTCATAAAACTAAAGCGTCTCTAGCACATTTCCTTCCCCAAGGCACACCATTAGCTCTAATTCCCATACTAGTAATTATTGAGACAATTAGCTTATTCATTCAACCTATAGCATTAGCAGTACGGCTCACAGCAAATATCACTGCAGGACATCTATTAATTCACCTAATTGGAGCCGCTACTTTAGCTCTAATAGA---TATTAGTATAACTACTGCTCTAATCACATTCAACATCCTTGTGCTACTAACAATACTTGAATTTGCTGTTGCCCTTATTCAAGCCTACGTCTTTACTTTACTAGTAAGCCTTTATCTACACGATAATGC +>Caperea_marginata_NC_005269 +------------ATGAACGAAAATTTATTTGCCCCCTTTATAATCCCAATA---GTAATAGGTATCCCCATTACCATTTTAATTATTATCCTCCCATCTATTTTATTTCCAACACCAAAT---CGATTAATTAATAACCGCACAATCTCCATTCAACAATGATTAACTAAACTTACATCAAAACAACTAATAAACGTACACAGTCCTAAAGGACAAACTTGATCTCTAATACTCATTTCACTATTCCTATTTATTGCCTCCACTAACCTCCTTGGAATATTACCTCACTCATTTACACCCACCACGCAACTCTCAATGAACGTAGGAATAGCGATTCCTCTATGAGCAGGCACTGTCGCCACAGGCCTCCGCAACAAAACAAAAATATCCTTAGCACACCTATTACCACAAGGTACACCCACTTTCCTTATCCCAATACTAGTAATTATCGAAACCATTAGCCTCTTCATTCAACCAGTAGCACTAGCCGTACGATTAACTGCCAATATCACAGCAGGTCACTTACTAATGCATTTAATTGGAGAAACAACCCTTACATTAATAAAC---ACCAGTCTATTTACAGCCCTTATTACCTTCATCATCCTTACTTTATTAACTATTCTTGAATTCGCCGTCGCCCTAATTCAAGCCTATGTATTTACTCTCCTAGTAAGCCTATACCTCCATGACAACACA +>Cricetulus_longicaudatus_NC_025330 +------------TAATGAACGAAAATCTATTCTCCTCTTTCATTACCCCAA---CTCTAATAGGATTACCTATTGTTATTGTTATTATTATGTTCCCACTTGTCATAATAACATCATCAA---AACGCTTAGTAAGTAATCGCCTCCATACCTTCCAACAATGACTAATTAAACTAACTACTAAGCAAATAATAACTATTCACTCACCTAAAGGACGAACTTGATCTCTAATACTGGCATCATTAATCATCTTTATTGGTTCAACAAACTTGCTAGGCTTATTACCCCATACATTTACACCTACAACTCAGCTATCTATAAATCTAGGTATAGCTATTCCTCTATGAGCTGGAGCTGTAATCCTGGGATTCCGACACAAAATGAAAGATTCACTTGCCCACTTTCTTCCACAAGGGACCCCTATCACACTTATCCCAATACTAATTATCATTGAAACAATTAGCCTATTTATTCAACCCATAGCTTTAGCAGTACGCTTGACAGCCAATATTACCGCAGGACACTTACTTATACACTTAATTGGAGGAGCCACTTTAGTATTAACCA---CAATTAGCCCACCAACTGCTATAATTACATTTATTATCTTAACTCTCCTGACTATTTTAGAATTTGCTGTAGCCCTAATTCAGGCCTATGTATTCACACTTCTAGTAAGTCTATACCTACATGATAATA +>Rupicapra_rupicapra_NC_020633 +------------AATGAACGAAAATCTGTTTGCCCCTTTCATTACCCCTAT---AATACTAGGCCTCCCCCTTGTTACTCTTATCATTCTATTTCCCAGCTTACTGTTTCCCACATCAAA---TCGACTAATTAATAACCGCCTCATCTCCCTCCAGCAGTGAATTCTCCAACTTGTATCAAAACAAATAATAAGCATTCACAACACCAAAGGACAAACATGAACATTAATACTAATATCCCTAATCCTATTCATCGGGTCTACAAATCTACTAGGCCTATTACCCCACTCATTTACACCAACCACACAACTATCAATAAATTTAGGCATGGCCATTCCCCTATGAGCAGGGGCCGTAGTCACAGGTTTTCGCAACAAAACTAAAGCATCACTTGCCCATTTCCTACCACAAGGGACACCCACCCCACTAATCCCAATACTAGTAATTATTGAGACCATCAGCCTTTTTATTCAACCAATAGCCCTCGCCGTACGATTAACAGCCAATATCACGGCAGGACACTTATTAATTCACTTAATCGGAGGAACCACCCTTGCATTAATAAA---TATCAGCACCACAGCAGCACTTATCACATTTGTTATTTTAATTCTATTAACAATTCTAGAGTTCGCAGTAGCCATGATCCAAGCCTACGTGTTTACTCTCTTAGTTAGCTTATACCTGCATGACAACAC +>Kobus_ellipsiprymnus_isolate_Niger_NC_020715 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTATA---GTACTAGGTCTTCCCCTTGTTACCCTTATTGTCCTATTCCCCAGTCTATTATTCCCAACATCAAAC---CGACTAGTAAACAATCGTCTTATTTCCCTCCAACAATGAGCACTCCAACTCGTATCAAAACAAATAATAAGTATTCACAACCCCAAAGGACAAACATGAACACTAATATTAATGTCCCTAATTCTATTCATTGGATCAACAAACCTAATAGGTCTATTACCCCACTCATTCACACCAACCACACAACTATCAATAAACCTAGGCATAGCCATCCCCCTATGAGCAGGAGCTGTAATTACAGGCTTCCGCAACAAAACCAAAGCATCACTTGCTCACTTCCTACCACAAGGAACACCCACTCCATTAATTCCAATGTTAGTAATTATTGAAACCATCAGCCTTTTTATTCAACCAGTAGCCCTTGCTGTACGACTAACAGCTAACATCACAGCAGGACACTTATTAATTCACCTAATTGGAGGGGCTACCCTCGCACTAATAAAC---ATTAGCACTACAACAGCCCTTATTACATTTATTATCTTAATTTTACTGACAATTCTCGAATTCGCAGTAGCCATAATTCAAGCCTATGTATTCACTCTATTAGTCAGCTTATACCTGCACGATAACACA +>Ursus_thibetanus_formosanus_NC_009331 +------------TAATGAACGAAAATCTATTCACCTCTTTTATTACCCCGA---TGATAATGGGGGTTCCCATTGTAGTCTTAATCGTTATGTTTCCGAGCATTTTATTCCCTTCTCCCA---GTCGACTGATCGATAATCGCTTAGTGTCTATTCAACAATGACTAGTCCGGCTAACATCAAAACAAATGCTATCCATTCATAATCGTAAAGGGCAAACCTGAGCACTAATGTTGATATCCCTAATCCTATTTATTGGCTCAACTAATCTTCTGGGTCTATTGCCACACTCATTCACACCTACCACGCAACTGTCAATGAATCTGGGAATGGCCATTCCCTTGTGAGCAGGTACAGTTGCCACTGGATTTCGATATAAGACCAAAGCATCCTTAGCTCACTTTCTACCTCAAGGAACACCTTTTCCTCTAATCCCTATACTTGTTATTATCGAAACAATCAGTCTATTCATCCAACCTATGGCCTTAGCCGTACGATTAACTGCTAATATTACTGCAGGTCACTTGCTCATCCATTTAATTGGAGGGGCTACTCTAGCTCTAATAA---GTATTAGCACTATTACAGCCCTCATCACCTTTATTATTCTAGTGCTACTTACTATTCTCGAGTTTGCTGTAGCCCTCATTCAGGCCTACGTCTTTACCCTGCTAGTAAGCCTATACTTACACGATAACA +>Vulpes_vulpes_NC_008434 +------------AATGAACGAAAATTTATTCGCCTCTTTCGCTACCCCTAC---AATAATGGGCCTCCCAATCGCTGTATTAATCGTAATATTCCCATCTATTCTATTCCCATCACCTAA---TCGACTAATTAACAATCGATTAATTTCTATCCAACAGTGATTAATTCAACTTACATCCAAACAGATACTAACAATTCACAACCAAAAAGGACGAACCTGAGCCCTTATGCTGATATCACTGATTTTATTTATTGGCTCGACTAATCTCCTCGGATTGCTACCCCACTCATTCACACCCACAACCCAATTGTCTATAAACCTAGGAATAGCAATTCCCCTGTGAGCAGGGACAGTAATTACCGGGTTCCGCCACAAAACTAAGGCCTCTCTAGCACACTTCCTGCCCCAAGGAACACCCCTCCCCCTAATTCCCATGCTAGTAATCATCGAGACAATTAGTCTATTCATCCAACCTATGGCCTTAGCTGTCCGATTAACAGCCAACATTACCGCAGGACACCTATTAATTCACCTAATTGGAGGGGCCACTCTAGCCCTAATCAA---CATCAGTGCTACCACAGCCCTTATTACTTTTATAATTCTAGTTTTACTTACCATTCTCGAATTCGCCGTCGCTCTTATTCAGGCCTACGTCTTTACACTACTAGTAAGTCTATACTTACATGACAATAC +>Mustela_altaica_NC_021751 +------------ATGAACGAAAATCTATTTTCCTCATTCGCTACCCCTACA---ATAATAGGACTACCCATCGTTATCCTCATCACCATATTCCCAAGTATCATATTCCCATCACCTAAC---CGACTGATTAATAATCGACTCGTTTCTGTCCAACAATGATTAGTACAACTAACATCAAAACAGATACTATCTATTCACAACCAAAAAGGACAAACCTGAGCATTAATACTAATATCTCTAATCCTATTTATTGGGTCTACTAACCTTTTAGGCCTCCTACCACACTCATTCACCCCTACCACACAACTGTCCCTAAACCTAGGAATAGCTATCCCCCTATGAGCAGGTACAGTAATCACTGGCTTCCGATATAAAACAAAAGCCTCTTTAGCCCACTTTTTACCACAAGGAACCCCACTTCCTCTAATTCCTATGCTTATTATCATCGAAACTATCAGCTTATTTATTCAACCTATAGCCCTGGCCGTGCGACTAACAGCTAACATCACAGCAGGTCACTTATTAATTCACCTAATTGGAGGAGCCACCCTAGCCTTAATAAGC---ATCAGTACTATTACAGCGATAATTACATTTACTATTCTTGTCCTGCTAACTATCTTAGAATTTGCAGTAGCTCTTATTCAAGCCTACGTCTTTACCCTTCTAGTGAGCCTATACTTACACGACAACACC +>Dorcatragus_megalotis_isolate_AWWP_NC_020701 +------------TAATGAACGAAAATTTATTTGCCTCTTTCATTACCCCTA---TAATATTAGGTCTCCCCCTTGTTACTCTCATCGTCTTATTCCCCAGCTTATTATTTCCAACATCAA---ACCGACTAATAAACAACCGTCTTATTTCTCTTCAACAATGAATCCTTCAACTTATCTCTAAACAAATGATAAGCATCCACAATTCTAAAGGACAAACATGAACATTAATATTAATATCCCTAATTTTATTTATTGGATCAACAAACCTACTTGGTCTTTTACCCCACTCCTTCACACCAACTACACAACTATCAATAAACCTAGGCATGGCTATTCCCTTATGAGCAGGAGCTGTAATCACAGGTTTTCGTAATAAAACTAAAGCATCATTTGCCCACTTCCTACCACAAGGAACACCAACTCCCCTAATCCCTATACTAGTCATCATTGAAACTATCAGTTTATTTATTCAACCAATAGCCCTTGCTGTACGATTAACAGCAAATATTACAGCAGGACACTTACTAATTCACCTAATTGGAGGAGCTACACTTGCACTTATAA---ATATTAGCCCTACTACAGCTTTCATTACATTTATCATCTTAATTCTATTAACAATTCTTGAATTTGCAGTTGCTATAATTCAAGCTTATGTATTCACTCTCTTAGTTAGCCTATATCTACACGACAATA +>Canis_lupus_chanco_NC_010340 +------------AATGAACGAAAATTTATTCGCCTCTTTCGCTGCCCCCTC---AATAATAGGTCTCCCTATTGTGGTATTGATCGTCATATTCCCTTCCATTTTATTCCCAGCACCCAA---TCGCCTAATCAATAATCGGCTAATCTCCATTCAGCAATGACTAATTCAACTAACATCAAAACAAATACTAGCAATTCATAACCAAAAGGGACGAACCTGAGCTCTCATACTTATATCACTAATTCTATTCATTGGCTCAACCAATCTACTTGGACTACTACCTCACTCATTTACGCCCACAACACAACTCTCTATAAACCTCGGAATAGCAATCCCCCTATGAGCAGGGGCAGTAATTACCGGTTTCCGCTATAAGACCAAAGCATCTTTGGCACACTTTCTACCCCAAGGCACCCCCCTTCCCCTAATTCCAATACTAGTAATCATCGAAACTATTAGTCTATTTATTCAACCCATAGCTCTAGCCGTTCGACTAACCGCCAATATTACTGCAGGACACCTCCTAATCCATTTGATTGGAGGGGCTACCTTAGCTCTTATTAA---TATTAGCGCGACCACAGCTTTTATCACTTTTATTATTTTAATCCTACTTACGATTCTAGAATTTGCTGTTGCCTTAWTTCAAGCCTATGTTTTTACCTTACTAGTAAGTCTATACTTACATGACAACAC +>Equus_zebra_isolate_H11_NC_020476 +------------ATGAACGAAAATTTATTCGCCTCTTTCGCTACCCCAACA---ATAATAGGCCTCCCTATTGTAATTTTAATTGTCATATTCCCCAGCATCCTATTCCCTTCATCCAAC---CGACTAATCAATAACCGCCTAACCTCGATTCAACAATGACTAGTTCAACTTACATCAAAACAAATAATAGCCATCCACAACAGCAAAGGACAAACCTGAACCCTCATACTCATATCACTGATCCTATTCATTGGCTCAACAAACTTATTAGGTTTATTACCTCACTCATTTACACCAACAACACAACTATCAATAAACCTAGGCATAGCCATTCCCCTGTGAGCAGGAACAGTATTCATAGGCTTTCGTCATAAAACAAAAGCAGCCCTGGCCCACTTTCTGCCTCAAGGAACACCTATTTTCCTCATTCCCATGCTAGTAATTATTGAAACTATCAGCCTATTTATTCAACCTGTGGCCCTAGCCGTTCGGCTAACTGCTAACATTACTGCCGGACATCTTCTAATTCACCTCATCGGAGGAGCAACGCTAGCCCTCATAAAT---ATTAGCCCCTCAACAGCCCTTATTACATTCATTATCCTAATTCTACTGACCATCCTCGAATTCGCAGTAGCCATAATCCAAGCCTACGTATTCACTCTCCTAGTAAGTCTCTACCTACATGACAACACC +>Chrysochloris_asiatica_NC_004920 +------------TAATGAACGAAAATTTATTTGCCTCATTCATCACTCCCA---CATTAATAGGACTACCAATTGTTCTACTAATTATTGCTTTTCCCACTATTATATTCCCTTCATCTA---AACGACTAATTCCTAATCGCCTAGTCTCATTCCAACAATGATTAATCTCATTAATTCTTAAACAAATAATGGCAATACACAATATTAAAGGTCGAACTTGATCCCTAATACTTATATCATTAATTCTATTTATTGGATCAACAAACCTACTAGGACTTCTACCCCATTCATTTACACCTACCACCCAATTGTCTATAAATCTAGGAATAGCAATCCCACTATGAGCTGGAGCCGTAATCACAGGATTCCGACACAAAACCAAAGCTTCCCTAGCACATTTTCTTCCTCAAGGCACCCCAATCCCACTAATCCCCATACTAATCATTATTGAGACTATCAGCCTATTCATTCAACCAATAGCTCTAGCCGTCCGACTAACCGCCAATATTACTGCGGGTCATTTATTAATTCACCTAATCGGAGGAGCCACTCTAGTACTTATAT---CCATTAGTATACCTACAGCAATTATTACGTTTATCATCTTACTACTTCTCACCGTACTGGAATTTGCAGTAGCCCTAATTCAAGCTTACGTATTTACTCTTCTAGTAAGCCTATACTTACATGACAATA +>Oryx_gazella_NC_016422 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTGCCCCTAT---AATTCTAGGCCTTCCCCTTGTTACCCTAATCGTCTTATTCCCCAGCCTACTGTTTCCTACATCAAA---CCGACTAATTAACAATCGTCTTATCTCCCTCCAACAATGAATACTCCAACTTGTATCAAAACAAATAATAAGCATTCACAATGCCAAAGGACAAACATGAACACTAATACTAATATCCCTAATTCTATTTATTGGATCAACAAACCTACTAGGCCTACTACCCCACTCATTTACACCAACTACACAACTATCAATAAATCTGGGTATAGCTATTCCTCTATGAGCAGGAGCTGTCATTACAGGCTTCCGTAACAAAACTAAAGCATCACTTGCCCATTTCTTGCCACAAGGGACACCAACCCCACTGATTCCAATGTTAGTAATTATTGAGACTATCAGCCTTTTCATCCAACCAATAGCCCTTGCTGTACGACTAACAGCTAATATCACAGCAGGACACCTACTAATTCATTTAATCGGAGGAGCCACCCTAGCACTAATAAA---TATTAGCACCGCAACTGCCCTTATTACGTTCATTATCCTAATTCTACTAACAATTCTCGAATTCGCAGTAGCTATAATTCAAGCTTACGTATTTACCCTCTTAGTCAGCCTATACCTGCACGATAACAC +>Sminthopsis_crassicaudata_NC_007631 +------------ATGAACGAAAATCTATTTACCCCTTTCATCTGTCCTAGT---ATCATAGGTGTTTCTACCTTACCCATTATTATTTTATTCCCTTGCTTAATCTTCTCAGCACCTAAG---CGCTGACTCCCCAACCGTATACAGATTCTTCAAATCTGACTTATTCGGTTAATTACTAAACAAATAATACTTATACACAACAAACTTGGCCGATCATGGACCTTAATGCTCATATCCTTAATTCTCTTTATTGCAACAACTAACCTCCTAGGCCTTCTCCCATACTCATTTACCCCGACGACCCAACTTTCAATAAATCTAGGAATGGCTATTCCTCTTTGAATGGGAACAGTAGTAATAGGCTTTCGTAATAAACCTAAAGCTTCTTTAGCTCACTTCCTACCACAAGGAACACCGACCCCTCTAATCCCCATGCTTATCATCATTGAAACTATTAGCCTTCTTATTCAACCTTTAGCTTTAGCCGTCCGGCTAACAGCTAATATTACGGCCGGTCACCTCCTAATTCACTTAATTGGCTCAGCTGCACTAGCCCTTATGTCT---ATCAGCCTAGCACTATCATCTATTACATTCATCATCCTATTCCTCCTAACAATCCTAGAGTTCGCCGTAGCTTTAATTCAAGCCTACGTCTTTACCCTTTTAGTAAGCCTATATCTACACGACAACACT +>Odobenus_rosmarus_rosmarus_NC_004029 +------------TAATGAACGAAAATCTATTTACCTCTTTCACTTCCCCTA---CCATAATGGGCTTCCCTGTCGTGATATTAATCATTCTATTCCCAAGTATCATATTCCCCTCACCTG---ACCGATTAATTAATAATCGCCTCGCCTCAATTCAACAATGACTAATCCAACTAACATCAAAACAGATAATATCCATTCATAATCATAAAGGACAAACATGAACATTAATACTCATATCACTCATTATATTTATTGGATCTACCAACCTGCTGGGCCTTCTACCACACTCATTTACCCCTACTACTCAACTATCAATAAACCTGGGGATAGCCATCCCCCTGTGAGCAGGAGCAGTTATTACAGGATTCCGATATAAAACTAAAGCATCCTTAGCCCACTTCCTCCCTCAAGGAACACCTCTTCCTCTTATCCCTATGTTAGTGATCATCGAGACCATCAGCCTATTCATCCAACCAATCGCTTTAGCCGTGCGATTAACAGCCAACATTACCGCAGGTCACCTATTAATACACCTGATTGGAGGAGCTACCCTCGCCCTAACCA---ATATCAGCATAACCACAGCCCTCATCACCTTTATTATTCTCATTCTACTCACCATTCTTGAATTTGCTGTAGCCCTAATTCAGGCCTACGTCTTTACCTTACTAGTAAGCCTGTACTTACACGACAACA +>Castor_fiber_NC_015072 +------------AATGAACGAAAATCTATTTACCTCTTTCATTACCCCCAC---TATAATAGGACTCCCTATTGTTACTCTAGTAATCCTCTTCCCAAGTATCATACTCCCAACTCCAAA---CCGACTAATTAATAACCGACTAACCTCAATTCAACAATGAGCAGCCAAACTAATCACTAAACAAATAATAACAATGCAAAACTCCAAAGGACGCACCTGATCTTTAATATTAATGTCACTTATCATCTTCATTGGATCAACCAACTTACTCGGACTTTTCCCATACTCCTTCACCCCAACAACTCAATTATCAATAAATCTAGGAATAGCCATCCCACTATGAACAGGGACTGTAATCCTAGGATTCCGCCATAAAATAAAATCATCCCTAGCTCACTTCCTACCACAAGGAACCCCAACCCCCCTAATTCCAATACTAATCATTATCGAAACTATCAGCCTATTCATTCAACCAGTAGCATTAGCCGTTCGACTAACAGCCAACATCACAGCAGGCCACCTATTAATCCATCTAATCAGCGGAGCCACACTAGCTCTACTAAC---AATTAGCCCAACCACAGCCTTAATAACATTCATCATTCTAATCCTCCTCACAATTCTTGAATTCGCAGTAGCCCTAATCCAGGCTTACGTATTCACACTCCTAGTTAGCCTATATCTCCATGACAATAC +>Mystacina_tuberculata_NC_006925 +------------ATGAACGAAAATTTATTCGCCTCTTTCATTACCCCTACG---CTAATAGGCCTGCCTATTGTCGTCCTAATTATTATATTCCCCACTATCCTATTTCCATCATCAAAT---CGACTAATTAACAACCGTCTCATTGCAATCCAACAATGACTAATCCACCTTACATCAAAACAGATATTGTCTATCCACAATCAAAAAGGTCAGACATGAGCTCTCATGCTTATATCACTAATTCTATTTATTGGCTCAACAAATCTGTTGGGCCTCCTGCCCCACTCATTCACTCCTACCACACAGCTATCTATAAACCTCGGCATAGCAATCCCCCTATGAGCAGGAACAGTAGTTCTAGGATTCCGTCACAAAACCAAAGCCTCCCTTGCACACTTCCTACCTCAAGGTACTCCCATTCCCTTAATTCCTATACTAGTTATCATCGAGACAATCAGTCTATTTATCCAACCGATCGCTCTGGCCGTTCGACTCACTGCTAATATTACTGCCGGACACCTACTAATTCACCTAATTGGAGGAGCCACTCTTGCTCTCATAAGT---ATTAGTAAGGCCACCGCACTAATTACCTTTATTATCTTAGTCCTACTTACAATTCTTGAATTCGCCGTAGCTCTAATCCAAGCATACGTGTTTACACTACTAGTCAGTCTTTACTTACATGATAATACC +>Colobus_guereza_NC_006901 +------------TAATGAACGAAAATTTATTTACCCCATTCACAACTCCAA---CAATCCTAGGCCTGCCTGCTGTAATTCTCATCATTCTGTTTCCTACACTACTACTCCCAACCTCCA---AACACATCATCAGCAATCGATTAATTACTATTCAACAGAATCTAATCCAACTAATTATAAAACAAATCATAACAACCCATAGTGCTAAAGGACAAGCCTGATCCCTAATACTTATATCTCTAATCATTTTTATTACCATGACTAATCTCCTTGGACTCTTACCGCACTCATTTACACCCACCGCTCAACTATCTATAAATTTAGCTATAGCAATCCCCCTATGAGCCGGCACAGTGATCACAGGACTTCGCTTCAAAACTAAAAGCTCCCTAGCCCACCTCTTACCACAAGGCACACCCACACCTCTTATCCCTATATTAGTAATTGTTGAAACCACTAGCCTCTTTATCCAACCAGTAGCCTTAGCCGTACGCCTAACCGCCAACATTACAGCAGGCCACCTACTTATACATCTAATTGGAGCCGCCACACTAACACTATCAA---CCATTAGCCTCCCTGCAGCCTCACTAACCTTAATACTCCTAGTATTATTTATAATCCTAGAGGTTGCAGTCGCCCTAATCCAAGCCTATGTATTCACACTCTTAGTAAGCCTTTATTTACACGACAATA +>Crocidura_russula_NC_006893 +------------AATGAACGAAAATTTATTCGCCTCTTTCGCTACCCCCAC---AATAATAGGTCTACCTATTGTTGTCCTAATTATCCTGTTTCCCAGCGTAATATTCCCTACCCCTAA---TCGACTTATTACTAACCGACTGACTGCCCTTCAACAATGAATAATTCAATTAACATCTAAACAAATAATGACTATTCATAATCAAAAGGGTCAAACATGAACACTCATATTAATATCCTTAATTTTATTTATTGGCTCAACAAACTTGCTAGGGTTATTGCCCCACTCTTTCACCCCTACCACTCAGCTTTCCATAAATCTTGGTATAGCAATTCCTTTATGAGCTGGGGCAGTAATCACTGGTTTCCGATATAAAACTAAGGCTTCATTAGCCCATTTTTTACCTCAAGGAACTCCCTTACCCCTTATCCCCATATTAATTATCATCGAAACTATTAGTTTATTTATTCAACCTATAGCGTTGGCTGTACGACTTACAGCTAATATTACAGCAGGTCATCTCCTTATTCATCTAATTGGAGGTGCTACATTAGTATTATCAAA---TATCAGCCCAACAACCGCACTCATTACATTCATTATTTTAATAATACTGACTATCCTTGAATTTGCAGTAGCCCTAATTCAAGCCTATGTATTCACACTATTAGTGAGCCTCTATCTGCATGATAACAC +>Bos_gaurus_isolate_Mondulkiri_NC_024818 +------------ATGAACGAAAATTTATTTGCCTCTTTTATTACCCCTATA---ATTTTAGGCCTCCCTCTCGTAACTCTCATCGTACTATTCCCCAGCCTACTATTCCCAACATCAAGT---CGACTAATAAACAATCGCTTTATAACCCTCCAACAATGGATACTTCAACTTATATCAAAACAAATAATGAGTATTCACAATTCTAAAGGACAAACATGAACATTAATATTAATATCTCTAATCCTATTTATTGGATCAACAAACCTACTAGGTCTGTTACCCCATTCATTTACACCAACAACACAACTATCAATAAACCTAGGCATAGCCATTCCCCTGTGAGCAGGAGCCGTAATTACAGGATTCCGCAATAAAACTAAAGCATCACTCGCCCATTTCTTACCACAAGGAACACCAACTCCACTAATCCCAATGCTAGTGATTATTGAAACTATTAGCCTTTTTATTCAACCTATAGCCCTCGCCGTACGGTTAACAGCCAACATCACTGCAGGACACCTGTTAATTCACTTAATTGGAGGGGCTACGCTTGCACTAATAAGT---ATTAGTACTACAACAGCTCTAATTACATTCATCATTCTAATCCTACTAACAATCCTAGAATTTGCAGTAGCCATAATCCAAGCCTACGTATTCACACTTCTAGTCAGCCTATATCTGCATGACAACACA +>Ovis_canadensis_NC_015889 +------------TAATGAACGAAAATCTATTTGCCTCTTTTATTACCCCTA---TAATATTAGGTCTCCCCCTCGTTACCCTTATTGTTTTATTCCCTAGCCTACTATTCCCCACATCAA---ACCGACTAATTAACAACCGCCTCATCTCCCTCCAACAGTGAATTCTTCAACTCGTATCAAAACAAATAATAAGTATTCACAACACCAAAGGACAAACATGAACATTAATACTAATGTCCCTGATTTTATTTATTGGGTCCACAAACCTACTAGGCCTCCTACCCCACTCATTCACACCAACTACACAACTATCAATAAATCTAGGCATGGCTATTCCTTTATGAGCAGGGGCTGTAATTACAGGCTTCCGCAACAAAACTAAAGCTTCACTCGCCCATTTCCTACCACAAGGAACACCCACTCCTCTGATCCCAATACTAGTAATTATTGAAACCATTAGCCTATTTATTCAACCAGTAGCCCTTGCCGTACGATTAACAGCCAACATCACAGCAGGACACTTACTAATTCACCTAATTGGAGGAGCCACCCTTGCACTAATAA---ACATTAACATCACAACAGCACTCATCACGTTCATTATCCTAATTCTATTAACAATCCTCGAGTTCGCAGTGGCTATAATTCAAGCCTATGTATTTACCCTTCTAGTCAGCTTATACCTGCATGATAACA +>Rhinolophus_ferrumequinum_quelpartis_NC_020326 +------------AATGAACGAAAATCTATTCGCCTCTTTCATTACCCCTAC---AATAATGGGCCTTCCCATTGTTATTTTAATTATTGTGTTTCCCACCATCCTATTTCCTTCAACCAA---CCGGCTAATTAATAATCGCCTCATTGCCATTCAACAATGACTAATCCACATAACATCAAAACAAATAATGGCCATTCACAACCCCAAAGGTCAAACCTGAACCCTTATACTAATGTCTCTCATCCTATTCATCGGTTCAACAAATCTCCTAGGATTATTGCCCCACTCCTTTACGCCAACCACACAACTATCCATAAACCTGGGCATGGCCATTCCCCTGTGAGCTGGGACCGTAATCCTGGGATTCCGCCACAAGACAAAAGCCTCTCTAGCCCACTTCCTACCACAAGGGACCCCTCTTCCCCTAATTCCAATGCTAGTCATTATCGAAACCATTAGCCTATTTATTCAACCTATAGCTCTAGCCGTACGGCTAACAGCCAATATTACTGCCGGACATCTCCTAATTCACCTAATTGGTGGTGCTACACTAGCCCTACTAAG---TATCAGCACAGCCACTGCCCTCATTACATTTATTATTCTTATCCTGTTGACAATCCTAGAATTTGCCGTCGCCCTAATCCAGGCCTATGTATTTACACTACTGGTTAGCCTGTACCTACACGATAACAC +>Rhinopithecus_bieti_2_RL_2012_NC_018060 +------------ATGAACGAAAATTTATTTACCCCATTTATAACCCCAACG---CTCCTAGGCTTGCCCGCTGTAGTACCTATCATTCTATTCCCTACATTATTATTTCCAACTTCCAAG---CACCTTATTAGTAATCGACTAATTACTACCCAGCAAAATCTAATCCAACTAATTATAAAACAAATAATAATAATTCACAATGCCAAAGGACAAACCTGATCCCTAATACTCATGTCCCTAATTATTTTTATTGCTACAACAAATCTTCTAGGACTCTTACCTCACTCATTTACCCCCACCACGCAACTGTCCATAAACCTAGCTATAGCAATTCCCCTGTGAGCAGGTACAGTAATTACAGGTCTTCGCTTCAAAACCAAAAACTCCCTAGCTCACTTTTTACCACAAGGCACACCTACACCTCTTATTCCCATATTAGTAGTTATCGAAACTATTAGCTTATTTATTCAACCAATAGCCCTAGCCGTACGCCTGACCGCCAACATCACAGCAGGACACCTACTAATACACCTAATCGGAAGTGCTACACTAGCACTATTAACT---ACTAGTTTCCTTGCAACCTTACTGACTTTAGTACTCCTACTATTATTAACAATCCTAGAAATAGCAGTTGCCCTAATCCAGGCCTACGTTTTTACACTCTTAGTAAGCCTTTATCTACATGATAATACT +>Nycticebus_bengalensis_NC_021958 +------------TAATGGACCAAAACTTATTTGCCTCATTCATTACCCCTA---CAATAGCTGGCCTGCCCATTGTAATTTTTATTGTAATATTCCCATACATTATAATCTCAGCCCCTA---CACGATTAATTAGCAACCGAATAACCTCTATACAACAATGACTTATTCAGCTAATCTTAAAACAACTAATAGTGACTCACAATACAAAAGGACGAACTTGATCATTAATGCTTATCTCACTTATCATTTTTATCGGTTCAACTAATCTACTAGGTCTACTACCCCACACTTTTACACCAACAACCCAGCTTTCAATGAATCTCGCTATAGCTATCCCACTATGAGCAGCTACTGTAATTACAGGTTTCCGACACAAAACCAAAGCGTCCCTAGCACACTTCCTGCCCCAGGGAACCCCTCCCTTGCTAATCCCCATACTAGTCCTTATCGAAACCATTAGCCTCTTAATTCAACCTATAGCCCTAGCCGTGCGACTAACAGCTAACATCACAGCAGGACATCTCCTTATACACCTTATCGGAGGCGCTACACTAGCAATTTCAT---CAATTAGCTCAGTCGCGGCCTCAATCACATTTATCATCCTCATCCTACTATCAATCCTAGAGTTCGCAGTAGCTCTTATCCAAGCATACGTATTTACACTGCTAGTCAGCCTTTACCTACACGACAATA +>Madoqua_kirkii_isolate_SUN_NC_020717 +------------AATGAACGAAAATTTATTTGCCTCTTTCATTACCCCTGT---AGTATTGGGCCTTCCCCTTGTCACTCTTATTGTTCTATTCCCCAGTTTGCTATTTCCAACGTCAAA---CCGACTAGTAAACAACCGCCTTATCTCCCTTCAACAATGAATTCTTCAACTTGTATCCAAACAAATGATAAGCATCCACAACCCTAAAGGACAGACATGAGCGCTAATGCTAATGTCCCTAATTCTATTTATTGGATCAACAAACCTGCTAGGTCTATTGCCCCATTCCTTTACACCAACTACACAGCTATCAATAAATCTAGGCATGGCCATCCCCCTATGAGCAGGGGCTGTAATCACAGGCTTCCGTAACAAAACCAAAGCATCACTTGCTCATTTCCTACCACAAGGAACACCAACTCCTCTAATTCCTATATTAGTAATTATTGAAACTATCAGTCTATTCATTCAACCAATAGCCCTTGCCGTACGATTAACAGCCAACATCACAGCAGGCCATCTGTTAATTCATTTAATCGGAGGAGCTACCCTCGCACTCATGAA---TATTAGCCCTACCACAGCCTTCATTACATTTATTATCCTAATCTTACTTACAATCCTTGAATTTGCAGTTGCCATGATCCAAGCTTACGTCTTTACTCTTCTAGTTAGCCTATACCTACACGACAACAC +>Cephalophus_leucogaster_isolate_SUN_NC_020689 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTATA---GTACTAGGCCTACCCCTCGTTACTCTTATCGTCCTATTCCCCAGTCTACTATTTCCAACATCAAAT---CGACTGATTAATAACCGTCTTATTTCCCTTCAACAATGAATACTCCAACTAATCTCAAAACAAATAATAAGCATCCACAATCCTAAGGGACAGACATGAGCATTAATACTAATATCCCTAATTTTATTTATTGGATCAACAAACCTACTAGGACTACTACCCCACTCATTCACACCAACCACGCAACTATCAATAAATTTAGGTATGGCCATTCCTCTATGAGCGGGAGCTGTTGTCACAGGCTTCCGTAACAAAACCAAAGCATCACTCGCCCATTTTCTGCCACAAGGTACACCTACCCCATTAATCCCAATGCTAGTGATTATTGAAACTATTAGCCTCTTTATCCAACCGGTAGCCCTTGCTGTGCGACTAACAGCCAATATCACAGCGGGGCACCTATTAATTCACCTAATCGGGGGAGCCACACTTGCACTAATAAGC---ATTAGCACCACAACAGCTCTTATTACATTTATTATCCTAGTCTTACTAACAGTTCTCGAGTTCGCAGTAGCCTTGATTCAAGCTTATGTATTTACCCTCCTAGTCAGCCTATACTTGCACGATAACACA +>Lemur_catta_NC_004025 +------------TAATGAACGAAAATTTATTTGCCTCTTTCATTACCCCAA---CAATCGTAGGAATCCCCATCGTTATTCTCATTATTATAACCCCCTACATTATTTTCCCTTCCCCTA---CTCGTCTAATCAATAATCGATTAACTTCCCTACAACAATGATTAGTTCAATTAATCCTAAAACAACTTATATCAATCCACAATACAAAAGGACGAACTTGATCCCTCATGCTAATCTCACTAATTCTATTCATCGGTTCTACTAATCTATTAGGCCTACTACCCCACTCATTTACCCCTACTACACAACTATCTATAAATTTAGGTATAGCAATTCCACTCTGAGCAGCCACAGTCATCAAAGGTTTCCGACACAAAACAAAAGCATCTCTAGCCCACTTCTTACCACAAGGAACACCTATTCCTTTAATCCCTATATTAGTAATTATCGAAACCATTAGCCTATTTATTCAACCCATAGCCTTAGCCGTACGGCTAACTGCCAATATTACAGCAGGTCACCTTCTTATACACTTAATTGGAGGGGCTACCTTAGTACTCACTT---CCATTAGCCCCGCTACAGCCTCAATCACATTCATTATCCTTACCCTTTTAACAATCCTTGAATTCGCCGTTGCCCTAATTCAAGCCTATGTCTTCACTCTACTAGTTAGCCTTTATCTACATGATAATA +>Kogia_breviceps_NC_005272 +------------AATGAACCAAAATCTATTTGCCTCTTTCACAACCCCAGT---AGTACTGGGAATTCCTATTATTACCCTGATCATTATATTCCCCATCATCCTATTTCCAACATCAAC---CCGACTAATTAACAACCGCATAATCTCCATTCAACAATGACTAACTAAACTCACATCAAAACAATTAATAGGCATACATAACTCCAAGGGACAAACATGATCACTAATGATCACCTCACTTATCTTATTTATCGCCTCCACCAATCTCCTTGGAATGCTGCCTCACTCATTCACACCCACCACACAACTCTCAATAAACTTAGGAATAGCTATCCCCCTATGAGCCGGCACTGTAATCATGGGCTTTCGCAACAAAACAAAGGCATCCTTAGCCCACTTCCTACCACAAGGCACACCCACCTTTCTCATCCCCATACTAGTAATTATCGAAACCATCAGCTTGCTCATTCAACCAATAGCCCTGGCCGTACGGCTAACTGCCAACATTACAGCAGGTCACTTACTAATGCACCTAATCGGCATGGCAACCCTTGCACTGACCAA---TATAAGCCTGCTTACTGCCCTCATCACATTCGTAATTCTCACCCTCCTAACTATTCTCGAGTTTGCTGTAGCCCTAATTCAGGCCTATGTATTTACCCTTTTAGTAAGCCTATACCTACACGACAACAC +>Camelus_bactrianus_NC_009628 +------------ATGAACGAAAATTTATTTGCCTCTTTCATTACCCCAACA---GTAATAGGACTTCCTATTGTAATCCTCATTATTATGTTCCCAAGCATACTATTCCCGGCCCCATTT---CGACTAATTAACAACCGTCTAATCTCTCTACAATATTGATTAATCCGACTCACATCTAAACAAATGATGACTATCCACAACCACAAGGGACAAACCTGATCCTTGATGCTAATATCTCTAATCATGTTTATCGGGACTACCAATCTCCTAGGACTCCTCCCACATTCATTTACCCCTACCACACAACTATCGATAAATCTAGGAATAGCAATTCCTTTATGAGCCGGAACAGTGGTCACTGGTTTTCGCAATAAAACAAAGGCATCACTAGCACATTTCCTCCCCCAGGGAACACCTACACCTCTAATCCCAATACTAGTAATCATCGAGACTATTAGCCTATTCATTCAACCCGTGGCCCTGGCCGTTCGACTAACAGCCAATATCACAGCAGGCCACCTATTAATACACTTAATTGGGGGAGCCACTTTGGCACTAATAAGC---ATTAATACACCAACAGCCCTTATTACATTTATTGTCCTAATTTTACTCACGATCCTTGAATTTGCCGTGGCTATAATCCAAGCCTATGTGTTCACCCTATTAGTAAGCCTATACTTACATGACAATACC +>Neophocaena_phocaenoides_NC_021461 +------------TAATGAACGAAAATCTATTTGCCCCTTTCGTAGTCCCAG---TAATACTGGGCATCCCCATCACCACCCTAATTATCATATTCCCCGCCCTATTATTCCCAACACCAA---ATCGACTAATCACCAATCGAATAGTCGCTATCCAACAATGATTAACTAAACTCACATCAAAACAGCTAATAATCACACATAACCTCAAAGGACAAACCTGATCTCTCATGCTTATTTCACTTTTCTTATTTATTGCCTCTACAAACCTTCTTGGAATAATACCCCACTCATTTACACCTACTACCCAACTCTCAATAAACCTAGGCATGGCTGTCCCTCTATGAGCTGGCACCGTCGTCATGGGTTTCCGCAACAAAATAGAAACATCCTTAGCCCACCTTTTACCACTAGGCACCCCCACCTTTCTAATCCCTATACTAGTAATAATCGAAACTATTAGCCTGTTTATTCAGCCCTTAGCCTTAGCAGTACGATTAACAGCCAACATCACAGCAGGCCACTTATTATTACACCTAATTGGAAGTGCAACCCTAGCATTGACAA---GTATCAGTCTACCTACAGCCCTCATTACATTCATTATCCTTACTTTACTAGTCATCCTTGAGTTCGCCGTAGCCTTAATCCAAGCCTACGTATTTACCCTACTAGTAAGCTTGTACTTGCAAGACAATA +>Loris_lydekkerianus_NC_021955 +------------AATGGACCAAAACCTATTTGCCCCATTCATTACCCCTAC---AATAATAGGCATGCCTATCGTAATTTTTATCATTATGTTCCCACTAATATTATTCTCTAACCCCAC---ACGACTAATTAGCAACCGGGTAACCTCCATGCAACAATGACTCATTCTCCTAACCTTAAAACAACTGATATCTACTCATAACACAAAAGGACAAACCTGATCCCTAATACTTATTTCACTTATTATATTTATTGGATCAACTAACCTTTTAGGTTTACTACCTCATACATTTACACCAACCACCCAACTTTCAATAAATCTTGGGATAGCTATTCCACTATGAGCAGCCACAGTAATTACAGGCTTCCGACATAAAACAAAAGCTACCCTAGCCCATTTCCTACCACAAGGGACCCCTCCCCCATTGATCCCTATGCTGGTCCTCATTGAAACCATCAGTCTTATAATCCAACCTTTAGCTCTAGCTGTACGATTGACAGCCAACATCACAGCTGGGCACCTCCTCATACATTTAATTGGAAATGCCACACTAGTCCTCTCATC---AATCAGCGTGACCACAGCTTCAATCACGTTTATTATCCTCATTATACTCTCAATTTTAGAGCTCGCAGTAGCTCTCATCCAAGCATACGTATTTACATTATTAGTTAGCCTGTACTTACACGATAATAC +>Eospalax_cansus_NC_021129 +------------ATGAACGAAAATTTATTATCTCCTCCTCCTTCCCATACA---TTAATAGGTATCCCTGTTGTTATTGCTATCATTATACTTCCAACTATTATATTCTCACATTCTAAT---CGTATCTATAATAACCGATTAGTAGTATTTCAACAATGAATTGTTCAAATAATCATTAAACAAATAATGTCAATTCACTCACAAAAAGGACGCTCATGAACCCTACTACTTATCTCACTAATCATTTTTATTGGCTCAACTAATCTTCTAGGTCTTCTACCACATACGTTTACCCCAACAACACAACTATCAATAAACCTAGGAATAGCAATTCCCCTTTGAGCCGGAGCAGTAATCCTAGGATTCCGCAATAAAACAAAATCCGCTCTAGCCCATTTTCTTCCCCAAGGAACACCCATCCCCTTAATTCCCATATTAATTATTATCGAAACAATCAGTCTATTTATCCAACCAATAGCCTTAGCAGTTCGATTAACCGCTAATATTACAGCCGGTCACCTACTAATTCATCTTATCGGAGGAGCAACTTTAGTTCTACTATCA---ATTAACATCCCCACAGCCTTAATTACATTTTTAATCCTAACCCTACTAACCATTCTAGAATTTGCCGTAGCACTAATTCAAGCCTACGTTTTCACTCTTCTAGTGAGTCTTTACTTACATGATAATACC +>Bos_mutus_NC_025563 +------------TAATGAACGAAAATTTATTTGCCTCTTTTATTACCCCTA---TAATTCTAGGTCTCCCCCTCGTAACCCTTATCGTACTATTCCCAAGCCTACTATTCCCAACATCAA---ACCGACTAGTAAGCAATCGCTTTGTAACCCTCCAACAATGAATACTTCAACTTGTATCAAAACAAATAATGAGTATCCACAATTCTAAAGGACAAACATGAACATTAATATTAATATCTCTGATCCTATTTATTGGATCAACAAACCTACTAGGCCTATTACCCCATTCATTCACACCAACAACACAACTATCAATAAACCTAGGCATAGCCATCCCCCTGTGAGCAGGAGCCGTAATTACAGGATTCCGCAATAAAACTAAAGCATCACTTGCCCATTTCTTACCACAAGGAACACCCACTCCACTAATCCCAATACTAGTAATTATTGAAACTATCAGCCTTTTTATTCAACCTATAGCCCTCGCCGTGCGGTTAACAGCTAACATCACTGCAGGACACCTATTAATTCACCTAATCGGAGGAGCTACACTTGCACTAATAA---GCATTAGCACTACAACAGCTCTAATTACATTCACCATTCTAATCCTACTAACAATTCTAGAGTTTGCAGTAGCTATAATCCAAGCCTATGTATTCACTCTCCTAGTCAGCCTATATCTGCATGACAACA +>Lagothrix_lagotricha_NC_021951 +------------AATGAACCAAAATCTATTTGCCTCCTTCAACATACCAGT---AATCTTAGGAATCCCCCTGATCACATTAATTATTCTATTTCCCACTATACTAATTATACCCTCTAA---TAAACTAATCAACAACCGGTTCTCCTCTCTTCAACAATGATTGATTCAACTTACACTAAAACAAATAATATTAACCCATAGCACTAAAGGACGAACATGATCCCTAATACTTTTAGCCCTGATCACTTTCATCGCCTTGAATAACCTTCTCGGACTAACACCTTATGCATTTACACCAACGACTCAACTATCAATAAATCTAGGCATAGCAATTCCACTATGATTAGCCACCGTACTAATAGGACTTCGATTTAAAACAAAAACATCCCTTGCTCACTTCCTACCCCAAGGAACACCCATCCCCCTTATCCCTATGCTAATCATTATTGAAACAATCAGCCTTTTTATTCAACCAATCGCACTGGCCGTACGACTGACAGCCAACATCACAGCAGGCCATCTATTAATACACCTATTAGGAGACACCACACTAACCCTTATATC---TATTTATCTATCTTCCTCTGTTATTACAGTAATCATTATTATTTTACTAATCACACTAGAACTAGGAGTCGCCCTAATTCAAGCCTACGTTTTCACACTACTAGTTAGCCTATATCTACATAATAACTC +>Tscherskia_triton_NC_013068 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAACC---TTAATAGGAATGCCCATCGTAATTATCATTATTATGCTCCCTGCAGCCATCATAACATCCTCAAAA---CGCCTAGTCAACAATCGCTTTCACACCTTCCAGCAATGACTAGTCAAACTAATTGCCAAACAAATGATAATGATTCACTCCTCAAAGGGACGAACTTGGTCCCTCATACTGGTATCTCTAATTATATTTATTGGCTCAACAAACTTATTAGGCCTCTTACCCTACACATTTACGCCAACAACCCAACTATCCATAAACCTCGGCATAGCAATTCCATTATGAGCAGGGACTGTTCTCCTAGGCTTCCGACACAAAATAAAAAGCTCATTAGCCCACTTCCTACCCCAAGGCACCCCTATCCCCCTCATCCCCATACTTATCATTATCGAAACAATCAGCCTGTTTATTCAACCCTTAGCCTTGGCAGTCCGTCTCACAGCTAATATTACTGCGGGCCACTTATTAATGCATTTAATCGGAGGCGCTACCCTAGCCTTAACCATC---ATTAGCCCTCCAACAGCCATTATCACATTCACTATCCTCATACTGCTAACTATCCTAGAGTTCGCCGTGGCCCTGATCCAAGCCTATGTGTTTACTCTCCTTGTAAGCCTTTACCTACACGATAACACC +>Suncus_murinus_NC_024604 +------------TAATGAACGAAAATTTATTCTCCTCTTTCGCTACCCCAA---CAATAATAGGTCTCCCTATTGTTATCCTAATTGTTTTATTTCCCAGTATTATATTCCCTATACCTA---ATCGACTTATCACAAACCGATTAACCACACTTCAACAATGATTAATTCAATTAACATCCAAACAAATAATAGCTATTCATAATCATAAGGGTCAAACATGAACCCTTATGTTAATATCTCTAATCCTTTTTATTGGTTCTACAAATCTATTAGGATTATTACCACATTCTTTTACCCCTACTACCCAACTTTCTATAAATCTTGGAATAGCAATTCCTTTATGAGCTGGTGCAGTAATTACTGGATTTCGATATAAAACTAAAGCTTCACTAGCTCATTTCTTACCCCAAGGTACGCCCTTACCACTAATCCCCATATTAATTATTATCGAAACTATTAGCTTATTTATTCAGCCAATAGCATTAGCCGTACGACTAACAGCCAATATTACAGCTGGTCACCTACTTATTCATTTGATTGGAGGCGCTACCTTAGTCCTTTCAA---ATATTAGTCCAACTACCGCACTCATCACATTTATTATTTTAATGATATTAACTATTCTTGAATTTGCAGTAGCCCTAATTCAAGCTTATGTATTTACACTATTAGTAAGCCTTTATCTGCATGATAATA +>Muntiacus_muntjak_NC_004563 +------------AATGAACGAAAATCTATTTGCCTCTTTTATTACCCCAAT---AATTCTAGGCCTTCCGCTTGCCACCCTAGTTGTTATATTTCCTAGTCTATTATTCCCAACATCAAA---TCGTCTAGTAAATAACCGCCTTATTTCCCTCCAACAATGAGCACTCCAACTTGTATCAAAACAAATAATAGGTATTCATAATACTAAAGGACAAACATGGACATTAATACTTATATCCCTAATCTTATTCATCGGATCCACAAATCTCCTGGGCCTATTACCTCACTCATTTACACCAACTACACAATTATCAATAAATCTAGGTATGGCCATCCCCCTATGAGCAGGAGCTGTAATCACTGGCTTCCGTAACAAGACTAAAGCATCACTTGCCCACTTTCTCCCCCAAGGAACACCAACCCCATTGATTCCTATACTAATTATTATTGAGACTATTAGTCTTTTTATTCAACCAATTGCCTTAGCTGTACGACTAACAGCTAATATTACTGCAGGACACCTGCTGATTCACCTAATTGGAGGAGCCACACTTGCACTAATAAG---CATCAGTACTACAACAGCCCTCATTACATTTATTATTCTAGTACTACTTACAATTCTTGAGTTCGCAGTAGCCATAATCCAAGCCTACGTATTTACTCTTCTAGTCAGCCTCTACCTGCATGACAACAC +>Mustela_kathiah_voucher_YP6126_NC_023210 +------------ATGAACGAAAATCTATTCTCCTCATTCACTACCCCTACA---ATAATAGGACTACCCATCATTATTATCATTACCATATTTCCAGGCATTATATTTCCATCACCTAAT---CGACTAATCAACAACCGACTCATCTCTATTCAACAATGATTAGTACAACTAACATCAAAACAAATACTATCTATCCACAACCAAAAGGGACAAACTTGAGCATTAATACTAATATCTCTAATCCTATTTATTGGGTCTACCAATCTATTAGGCCTCCTACCCCACTCGTTTACCCCAACTACACAACTATCCCTAAACCTAGGGATAGCTATTCCCTTATGAGCAGGTACAGTAATTACCGGCTTCCGGCATAAAACAAAAGCTTCCTTAGCCCATTTCTTACCACAAGGAACACCACTACCGCTAATTCCCATGCTTATCATTATCGAAACTATTAGCCTATTTATTCAACCCATAGCCTTAGCCGTACGATTAACAGCTAATATTACTGCAGGTCACTTATTAATTCACTTGATTGGAGGAGCTACCCTAGCCCTAATAAAC---ATTAGCACCATTACAGCAATAATTACCTTTACTATTCTTGTCCTCTTAACTATCCTAGAATTTGCAGTAGCCCTTATCCAAGCCTATGTATTTACCCTACTAGTAAGCCTATATTTACATGATAACACT +>Cephalophus_silvicultor_isolate_SUN_NC_020694 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTA---TAATACTAGGCCTACCCCTCGTTACCCTCATCGTCTTGTTTCCCAGTTTATTATTTCCAACATCAA---ATCGACTAATTAACAACCGCCTCATTTCCCTCCAGCAATGACTACTCCAACTCATCTCAAAACAAATAATAAGCATTCACAATCCTAAGGGACAAACATGAGCACTAATACTAATATCCTTAATTCTATTTATTGGGTCAACAAACCTGTTAGGTCTACTACCCCACTCATTTACACCAACCACGCAACTGTCAATAAATTTAGGCATAGCGATTCCTCTGTGAGCAGGAGCTGTCGTCACAGGCTTCCGCAATAAAACTAAAGCATCACTCGCCCATTTCCTACCACAAGGAACACCAACCCCATTAATTCCAATACTAGTAATTATCGAAACTATTAGCCTCTTTATCCAACCAGTAGCCCTTGCCGTACGACTAACAGCCAACATCACAGCAGGACACCTATTAATTCACTTAATCGGAGGAGCCACACTTGCACTAATAA---GCATTAGTACCACAACAGCCCTCATCACATTTATTATCTTAATCCTACTAACAATTCTTGAATTCGCAGTAGCCATAATTCAAGCCTATGTATTTACACTCCTAGTCAGCCTATACCTGCACGACAACA +>Cervus_nippon_yakushimae_NC_007179 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAAT---AATCCTAGGCCTTCCACTAGCTACTCTCATCGTTATATTTCCTAGCCTATTATTTCCAACATCAAA---TCGTCTAGTAAATAACCGTCTCATTTCCCTCCAACAATGGATACTTCAACTTGTATCAAAACAAATAATAGGGATTCACAATGCCAAAGGACAAACATGGACACTAATACTCATGTCTCTAATCTTGTTTATTGGATCCACAAATCTCCTGGGCTTATTACCCCACTCATTTACACCAACCACACAATTATCAATAAACCTAGGCATAGCTATCCCTCTGTGAGCAGGAGCTGTAATCACAGGTTTCCGTAATAAGACTAAAGCATCGCTTGCCCACTTTCTTCCACAAGGAACTCCGACCCCACTAATTCCCATACTAGTTATTATCGAAACTATTAGTCTTTTTATTCAACCAATCGCTTTAGCCGTACGACTAACAGCCAATATTACTGCAGGACACTTACTAATTCACCTAATTGGAGGAGCTGCACTTGCACTAATAAG---TATCAGTACTATAATAGCTCTTATCACATTCATTATTCTAGTCCTACTCACAATCCTTGAATTTGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTTCTAGTCAGCCTTTACTTGCACGACAACAC +>Equus_hemionus_NC_016061 +------------ATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCAACA---ATAATAGGCCTTCCTATTGTAATTCTAATCATCATATTCCCCAGCATCCTATTCCCCTCATCCAAC---CGACTAATCAACAATCGTCTAATCTCAATTCAACAGTGGCTAATCCAACTTACATCAAAACAAATAATAGCTATTCACAACAACAAAGGACAAACTTGAACCCTTATACTCATGTCGCTGATCCTATTCATTGGCTCAACAAACTTATTAGGCCTACTACCCCACTCATTTACACCAACAACACAACTATCAATAAACCTAGGCATAGCCATTCCCTTATGAGCAGGAACAGTATTCATAGGCTTTCGTCATAAAACAAAAGCAGCCCTAGCTCACTTTCTGCCTCAAGGAACACCCATTTTCCTCATTCCCATGCTAGTAATTATTGAAACCATCAGCCTATTTATTCAACCTGTAGCCCTAGCCGTACGGCTAACCGCTAACATTACTGCTGGACATCTTCTAATCCACCTTATCGGAGGGGCAACGCTAGCCCTCATAAAC---ATTAGCCCCTCAACAGCCCTTATTACATTCATTATCCTAATTCTACTAACTATCCTCGAATTCGCAGTAGCCATAATCCAAGCCTACGTATTCACTCTCCTAGTAAGTCTCTACCTACATGATAACACC +>Nanger_granti_isolate_PhC19_NC_020725 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTA---TAATTCTAGGCCTCCCCCTCGTCACCCTTATTGTCCTATTTCCCAGCTTATTATTTCCAACATCAA---ACCGGCTAATAAACAATCGCCTTATCACTCTTCAACAATGAGCACTTCAACTTGTATCTAAACAAATAATGAGCATCCATAACCCTAAAGGACAAACATGAGCACTAATACTAATATCCCTAATTCTATTTATTGGGTCAACGAACTTATTAGGCCTACTACCCCACTCTTTTACACCAACCACACAATTGTCAATAAACCTAGGCATAGCCATTCCCCTATGAGCAGGAGCTGTAATTACGGGCTTCCGCAACAAAACCAAGGCATCACTCGCTCACTTTTTACCACAAGGAACACCCACTCCCCTAATCCCTATACTGGTAATTATCGAAACTATCAGTCTATTTATTCAACCAGTAGCCCTTGCAGTACGACTAACAGCCAACATTACAGCAGGACACCTATTAATTCACTTAATTGGAGGAGCCACGTTAGCACTAATAA---ATATTAGCACTACAACAGCTCTCATTACATTTATTATCTTAATCCTACTAACAATCCTTGAATTCGCAGTAGCCATAATTCAAGCTTACGTATTTACTCTTCTAGTTAGCCTATACTTACACGATAACA +>Megaptera_novaeangliae_NC_006927 +------------AATGAACGAAAATTTATTTGCCCCTTTTATAATCCCAAT---TATGCTAGGTATCCCTATTACCACTCTAATCATCATTCTCCCATCTATCCTATTCCCTGCACCAAA---TCGACTAATCAACAACCGCACAATCTCCATTCAACAGTGATTGACTAAACTCACGTCAAAACAACTAATAAATGTACACAGCCCTAAAGGACAAACTTGAGCTCTAATACTCATCTCACTATTCTTATTTATCGCCTCCACCAATCTCCTTGGAATATTACCTCACTCATTTACACCCACCACACAACTCTCAATAAACGTAGGAATGGCCATCCCCCTATGAGCTGGTACCGTTGCCACAGGCTTCCGCAACAAAACAAAAATATCTTTAGCACATCTACTACCACAGGGCACACCCACTTTTCTTATTCCCATATTAGTAATCATTGAAACTATCAGCCTATTCATTCAACCAGTAGCACTAGCCGTACGACTAACCGCCAACATCACAGCAGGTCACTTATTAATACATCTAATTGGAGAAACAACCCTCACACTAATAAA---TACTAGCCTATTTACAGCCCTTATCACCTTTACAATCCTTGCCCTACTAACCATTCTTGAATTTGCTGTCGCCCTAATTCAAGCTTACGTATTTACCCTCCTAGTAAGCCTATACCTCCATGACAACAC +>Eulemur_mongoz_NC_010300 +------------ATGAACGAAAATTTATTTGCCTCTTTCATTACCCCAACA---ATTGTAGGAATTCCTATCGTCATATTTATTATCCTAATCCCAAGCATCTTCTTTCCCTCCCCTACT---CGCCTAATTAACAATCGACTAACCTCATTACAACAATGACTAATTCAGTTAATCCTAAAACAACTAATATTAATTCACAATATTAAAGGACGAACTTGATCTCTAATATTAATCTCACTAATTTTATTCATTGGCTCTACCAATTTATTAGGCTTATTACCCCACTCATTTACCCCTACCACACAACTATCTATAAACTTAGGCATAGCAATTCCACTCTGAGCAGCTGCAGTAATCAAAGGTTTCCGCCACAAAACAAAGATATCCCTGGCCCATTTCCTACCTCAAGGAACACCCATTCCTTTAATTCCCATACTAGTAATTATTGAGACCATTAGCCTCTTCATTCAACCTATAGCCCTAGCCGTACGACTAACTGCCAATATTACAGCAGGTCACCTCCTTATGCATCTAATTGGAGGAGCTACCTTAGTACTTTCTTCC---ATCAGCCCTACTACAGCTTTAATTACATTTATCATCCTTACCCTTCTTACAATTCTTGAATTCGCCGTTGCCCTAATTCAGGCCTATGTATTTACTCTACTAGTTAGCCTTTACTTACATGACAACACC +>Cephalophus_ogilbyi_isolate_CAR125_NC_020692 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTA---TAATACTTGGCCTACCCCTCGTTACCCTCATCGTCCTATTCCCAAGCTTACTATTTCCAACATCAA---ATCGACTAGTTAACAATCGCCTCATTTCCCTTCAACAATGACTACTCCAACTCATCTCAAAACAAATGATGAGCATCCACAACCCTAAAGGACAAACATGAGCACTAATACTAATATCCCTAATCTTATTCATTGGGTCAACAAATCTACTAGGTCTGCTACCCCACTCATTCACGCCAACCACACAACTATCAATAAACTTAGGCATGGCCATCCCCCTATGAGCAGGGGCTGTCGTTACAGGCTTTCGTAATAAAACTAAAGCATCACTCGCCCATTTCCTGCCACAGGGAACGCCAACCCCATTAATCCCAATACTAGTAATTATTGAAACCATCAGCCTATTCATCCAACCGGTAGCCCTCGCTGTGCGACTAACAGCCAATATTACAGCAGGACACCTATTAATTCACTTAATCGGAGGAGCCACACTCGCACTAATAA---ACATCAGTACCACAACAGCTCTTATCACATTCATCATCCTAGTACTGCTAACAATTCTTGAGTTTGCGGTAGCCATAATTCAAGCTTATGTATTTACCCTTCTAGTCAGCCTATACCTGCACGACAACA +>Macaca_mulatta_NC_005943 +------------AATGAACGAAAACTTGTTTACCCCTTTCTCAGCCCCAAC---AATTCTAAACCAACCCGCTACAATCCCCATTATCCTATTCCCCACCCTACTAATCTTAACCCCCAA---ACATCCCATTAATAATCGACTAGCTACCATTCAACAAAATCTGACTCGATTCACTCTAAAACAAATAATAATAACTCACAACGCTAAGGGACAAACCTGATCCTTAATACTAACATCCCTAATCACCTTTACTGCTACAACAAACCTCCTAGGACTTATGCCTTACTCGTTCACGCCAACTACCCAACTTTCCATAAACCTAGCTATAGCAATCCCCCTATGAGCGGGCACAGTAATAGTGGGGCTTCGCTTTAAAACCAAAAACTCCCTAGCCCACCTCCTACCACAAGGCACACCCACACCTCTCATTCCTATGCTAGTAGCAATCGAAACTATCAGTCTACTTATTCAACCAGTGGCTCTAGCCGTACGATTAACCGCAAACATCACAGCCGGCCATCTGCTAATACACCTGATCGGAAACACTGTACTAGCACTATCAAC---CACCAACCTCTCCATAGCTCTACTAGCCTCTACACTTCTGGTATTACTAACTATTCTAGAAATTGCAGTAGCCCTAATTCAAGCCTATGTCTTCACACTCTTAATTAGCCTTTATCTACGGAACAACAC +>Cercocebus_torquatus_NC_023964 +------------ATGAACGAAAATCTATTTACCTTATTCTCAACTCCAATA---GTATTAGGCCAACCCGCCACAATCCCTATTATCTTATTCCCTATACTACTGATCCCAACTTCCAAA---TATCTTATTAAGAATCGACTAACCACCATCCAACAAAACCTAACCCAACTCACTCTAAAACAAATAATAACAACCCATAATACCAAAGGACAAACTTGATCTCTAATACTAATATCCCTAATTATTTTTATCACCATAACTAACCTTCTAGGACTCCTACCATACTCATTTACACCAACCACCCAACTTTCTATAAACCTAGCCATAGCAATTCCCCTATGAGCAGGCACAGTAATTATAGGACTGCGCTTTAAGACCAAAAATTCCCTAGCCCATCTTCTACCACAAGGCACGCCCACACTGCTCATTCCCATACTAGTAGTAATCGAAACTATTAGCCTGCTTATTCAACCAGTAGCCCTAGCCGTACGACTAACCGCTAACATCACAGCTGGTCATCTATTAATGCACCTGATTGGAAACACTGCACTAGCACTATCAACC---GTTAACTCCTCTGCCACCCTCCTAATCTTTACGCTCCTAATACTATTAACTATCCTAGAAATTGCAGTCGCCCTAATTCAAGCCTACGTTTTTACACTCCTAACCAGCCTTTATTTACATAACAACACC +>Sorex_cylindricauda_NC_025278 +------------TAATGAACGAAAATTTATTCGCCTCTTTCGCTACCCCAA---CAATAATAGGTCTTCCTATTGTTATATTAATTATCTTATTCCCTAGCATTATATTCCCAGCCCCTA---ATCGACTAATTAATAACCGGTTAGTATCACTCCAACAATGATTAATTCAACTAACTTCAAAGCAAATAATAGCAATTCATAACCAAAAAGGACAAACATGAACACTCATGCTAATTTCACTAATCCTATTTATTGGCTCTACCAATTTACTAGGTCTTTTACCACATTCATTTACACCCACAACACAACTTTCAATAAACTTAGGAATAGCCATTCCCCTATGAGCCGGAACAGTAATTACAGGCTTTCGATACAAAACCAAAGCATCCTTAGCCCATTTCTTACCCCAAGGTACCCCTTTACCACTAATTCCAATACTTATTATTATCGAAACTATTAGTCTCTTCATTCAACCAATAGCATTAGCCGTACGACTAACCGCAAATATTACAGCCGGACATCTATTAATTCATCTAATTGGAGGCGCAACTCTAGTCTTAATAA---GCATTAGTCCCATCACAGCATTCATCACTTTCATTATTTTAGTAATACTTACAGTACTTGAATTTGCCGTAGCATTGATTCAAGCCTACGTTTTTACTCTCTTAGTAAGCCTTTACTTGCACGATAATA +>Lepus_sinensis_NC_025316 +------------AATGAACGAAAATCTATTCTCCTCTTTCATTACCCCTAC---AATAATAGGCTTACCAATCGTAATCCTAATCATCATATTCCCAACACTTCTATTTCCTGCCCCTAC---CCGACTAATCAACAACCGTCTAGTCTCAGCTCAACAATGATTAGCCCGACTAATTTTAAAACAAATAATAATAATGCACTCCCCCAAAGGACGGACCTGGTCCCTCATACTGATTTCCCTGATCATATTTATTGGCTCAACCAACCTTCTAGGCCTCTTGCCCCACTCATTTACACCAACAACCCAACTATCCATGAACCTAGGAATAGCTATCCCGCTATGAGCAGGAGCCGTAATTACAGGCTTCCGTTACAAAACTAAAGCATCTCTAGCCCATTTACTCCCACAAGGAACCCCTGTGCCACTGATTCCTATACTAGTAATTATTGAAACAATTAGCCTATTTATTCAACCCATGGCCTTAGCTGTACGACTCACAGCCAACATTACAGCAGGTCACTTACTAATACATCTCATTGGAGGTGCAGCACTCGCCTTAATCTC---TATTAGTCCCACAACAGCCTTAATCACTTTTATTATTCTTATTCTCTTAACAATTCTAGAATTTGCTGTAGCCCTAATTCAAGCCTACGTCTTCACCCTTCTTGTAAGCCTATATTTACACGATAACAC +>Chlorocebus_tantalus_NC_009748 +------------ATGAACGAAAATCTGCTTACCCTATTCGCAACCCCAATA---ATCCTAAACCAACCTGCCACAATCCCCATCATTATATTCCCCATATTACTAATCCCAACATCCAAA---CATCTCATTAACAACCGACTAATCACTATCCAACGCAACCTAGTACTATTCACCCTAAAGCAAATAATAATAACCCATAATGCTAAAGGGCGAACCTGATCTCTAATACTAATATCCCTAATTACCTTTATTACCACAACTAACCTTCTGGGACTCCTACCCCACTCATTTACACCCACCACCCATCTATCTATAAACCTCGCTATAGCAATCCCCCTATGAGCTGCCACAGTAATCACAGGCCTTCGCTTTAAAACCAAAAGCTCCCTGGCTCACCTCCTACCACAAGGCACACCAACATTACTCATCCCTATACTAGTAATAATCGAAACCATTAGCCTGGTCATCCAGCCAGTAGCCCTAGCCGTACGCTTAACTGCTAACATTACGGCCGGTCACCTGCTAATACACCTAGTTGGAAACGCAACACTAACGCTACTAACT---ATCAGCCCCCCCGCTACTCCACTGATCTTCACACTCCTGACACTACTTACCATCCTAGAGATCGCAGTTGCTTTAATCCAAGCCTATGTTTTCACACTTCTAGTTAGCCTTTATTTACACAACAACACC +>Hydrurga_leptonyx_NC_008425 +------------TAATGAACGAAAATCTATTCGCCTCTTTCACTACCCCTA---CAATAATAGGCCTCCCTATCGTAATCTTAATCATTTTATTCCCAAGCATCCTGTTTCCCTCTCCCA---ATCGACTAGTCAATAATCGTCTTATCTCAATCCAACAATGACTAATCCAATTAACATCGAAGCAATTATTATCTATTCATAACTACAAAGGACAAACATGAGCACTAATACTTATATCACTCATTCTATTCATCGGATCTACCAATCTACTAGGTCTCTTACCACACTCATTTACTCCTACTACTCAACTATCAATAAACCTAGGAATAGCTATCCCTCTATGAGCAGGGACCGTCATCACAGGCTTTCGACACAAAACAAAAGCATCCCTAGCCCACTTTCTACCTCAAGGAACACCCTTACCCCTTATTCCAATATTAGTAATTATTGAAACTATTAGTCTATTCATTCAACCTATGGCCCTAGCTGTACGACTAACAGCCAACATCACTGCAGGTCATCTACTAATTCACCTAATCGGAGGAGCTACCCTTGTCCTTATAG---ACATTAGCACCGCTACAGCCTCAATTACCTTTACCATCCTTATTCTCCTCACCATCCTAGAATTTGCTGTAGCCCTTATCCAAGCCTATGTCTTCACACTACTAGTTAGTTTATATCTACACGACAACA +>Bos_javanicus_NC_012706 +------------AATGAACGAAAATTTATTTACCTCTTTTATTACCCCTGT---AATTTTAGGTCTCCCTCTCGTAACCCTTATCGTACTATTCCCAAGCCTACTATTCCCAACATCAAA---CCGACTAGTAAGCAATCGCTTTGTAACCCTCCAACAATGAATACTTCAACTTGTATCAAAACAAATAATGAGTATCCACAATTCTAAAGGACAAACATGAACATTAATATTAATATCTCTGATCCTATTTATTGGATCAACAAACCTACTAGGCCTATTACCCCATTCATTCACACCAACAACACAACTATCAATAAACCTAGGCATAGCCATCCCCCTGTGAGCAGGAGCCGTAATTACAGGATTCCGCAATAAAACTAAAGCATCACTTGCCCATTTCTTACCACAAGGAACACCCACTCCACTAATCCCAATACTAGTAATTATTGAAACTATCAGCCTTTTTATTCAACCTATAGCCCTCGCCGTGCGGTTAACAGCTAACATCACTGCAGGACACCTATTAATTCACCTAATCGGAGGAGCTACACTTGCACTAATAAG---CATTAGCACTACAACAGCTCTAATTACATTCACCATTCTAATCCTACTAACAATTCTAGAGTTTGCAGTAGCTATAATCCAAGCCTATGTATTCACTCTCCTAGTCAGCCTATATCTGCATGACAACAC +>Capricornis_milneedwardsii_NC_023457 +------------ATGAACGAAAATTTATTTGCCTCTTTCGTTACCCCTATA---GTACTAGGCCTTCCCCTTGTTACCCTTATTGTTTTATTCCCTAGCTTTCTATTCCCCACATCAAAC---CGACTAATTAATAACCGCCTCATCTCCCTCCAACAATGAGCACTTCAACTCATCTCAAAACAAATAATAAATATTCACAACACCAAAGGACAAACATGAACATTAATACTAATATCCCTAATCTTATTTATTGGGTCTACAAATTTATTAGGCCTATTACCCCACTCATTTACACCAACAACACAATTATCAATAAACCTAGGCATGGCTATTCCCCTGTGAGCAGGAGCCGTAATTACAGGCTTTCGCAACAAAACTAAAACATCACTTGCTCATTTTCTACCACAAGGGACACCAACCCCACTAATCCCAATGCTAGTAATCATCGAAACCATTAGCCTTTTCATCCAACCAATAGCCCTTGCCGTACGACTAACAGCCAATATCACAGCTGGACACTTATTAATACACTTAATTGGAGGAGCCACTCTTGCATTAATAAAC---ATCAGCACCACAGCAGCATCCATTACATTCATCATCCTAATTCTACTAACAATTCTAGAGTTCGCAGTAGCTATAATTCAAGCCTACCTATTTACCCTTCTAGTTAGCTTATACCTGCATGATAATACA +>Mephitis_mephitis_voucher_YP2994_NC_020648 +------------TAATGAACGAAAATCTATTCGCCTCTTTCACTACCCCCA---CAATAATTGGCCTACCAATTGTCATCATTATTGTACTATTCCCCAGTATCCTATTCCCCACATCTA---ATCGATTAATTAACAACCGTCTTATTTCAATTCAACAGTGATTGGTACAACTTACATCAAAACAAATACTGTCAATCCATAACAATAAAGGACAGACCTGGGCCTTAATATTAATATCTCTCATTTTATTTATTGGTTCAACCAACCTACTAGGCTTATTACCACACTCATTTACCCCTACCACACAACTATCTATAAATCTAGGAATAGCCATCCCCTTATGAGCTGGTACAGTCGTGACTGGCTTTCGATACAAAACAAAATCATCCTTGGCCCACTTCTTACCCCAAGGGACACCTATTCCTCTGATTCCTATACTTGTTATTATCGAAACTATTAGCCTATTCATTCAACCCATAGCCCTGGCCGTACGACTAACAGCTAATATCACTGCAGGACACCTATTAATTCACTTAATCGGAGGGGCCACTTTAGCCTTAATAA---ATATCAGCACCGCTACAGCCCTAATCACATTCACTATCCTCATCCTCCTAACGATCCTAGAATTTGCAGTAGCCTTAATCCAGGCCTACGTATTCACCCTTCTAGTAAGCCTATATTTACATGATAACA +>Tarsius_syrichta_NC_012774 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTAC---AATAATAGGTCTACCAGTAGTAGTACTAGTTATTATATTCCCAATTATCCTATTTCCAACCTCAGC---CCGTCTAATTAACAACCGATTTATCTCCCTCCAACGATGGTTAGTTCAACTAGTACTTAAACAAATAATGTCTACACACAATAATAAAGGTCGAACCTGATCCCTAATATTAATCTCCCTAATTTTATTTATTGGATCCACAAACCTATTAGGCCTACTGCCCCACTCCTTCACACCAACTACCCAATTATCAATAAATTTAGGTATAGCGATTCCTCTATGAGCAGGAGCAGTAATTACCGGCTTCCGACACAAAACCAAAGCATCCTTGGCTCACTTTCTCCCACAAGGGACCCCCTTTCCCCTTATTCCGATACTGATTATTATCGAAACAATCAGCCTCTTTATTCAACCAATAGCTCTAGCCGTACGACTGACCGCCAATATTACAGCAGGTCACTTGCTCATACACTTAATTGGAGGGGCTACTCTAGTTTTATCATC---AATTAGCACCATTGCAGCATTAACAACATTTATTATTCTTATATTACTAACAATTCTAGAACTAGCTGTGGCCCTTATTCAAGCTTATGTTTTTACACTTCTAGTAAGTCTTTATTTACATGATAACAC +>Chlorocebus_aethiops_NC_007009 +------------ATGAACGAAAATCTATTTACCTTATTCGCAACTCCAATA---ATCCTAAACCAACCTGCCACAATCCCCATCATTATATTCCCCATACTACTAATCCCGACATCCAAA---CATCTCATTAACAACCGACTAATCACTATCCAACGTAACCTAGTACTATTCACTCTAAAGCAAATAATAATAATCCATAATGCTAAAGGGCGAACCTGGTCTCTAATACTAATATCCCTAATTACCTTTATTACCACAACTAACCTTCTGGGACTCCTACCCCACTCATTTACACCTACCACCCAACTATCTATAAACCTCGCTATAGCAATCCCCTTATGAGCTGCCACAGTAATTACAGGCCTTCGCTTTAAAACCAAAAGCTCCCTGGCTCACCTCCTACCACAAGGCACACCAACATTACTCATCCCCATACTAGTAATAATCGAAACCATTAGCCTGATCATCCAACCAGTAGCTCTAGCCGTACGCTTAACTGCCAACATTACGGCCGGTCACCTGCTAATACACCTGATTGGAAACGCAACACTAACACTACTAACT---ATCAGCCCCCCCGCTACTTCACTGGTCTTTACACTCCTAACACTACTTACCATCCTAGAGATCGCAGTTGCTTTAATCCAAGCCTATGTTTTCACACTCTTAATTAGCCTCTATTTACACAACAACACC +>Phoca_fasciata_NC_008428 +------------TAATGAACGAAAATCTATTCGCCTCTTTCACTACCCCTA---CAATAATAGGTCTTCCTATCGTAATCCTAATCGTCCTATTCCCAAGCATCCTATTTCCATCCCCTG---ATCGACTAATTAACAATCGTCTCGCCTCAATCCAACAATGATTAATCCAGTTAACATCAAAGCAAATACTATCAATCCACAACCACAAAGGACAAACATGAGCACTTATACTTATATCACTTATTCTATTTATTGGATCTACTAACCTGCTAGGCCTCTTACCACACTCATTCACTCCTACCACTCAATTGTCCATAAACCTGGGAATGGCTATCCCCCTATGAGCAGGGACAGTCATCATGGGTTTTCGACATAAAACAAAAGCATCCCTGGCCCACTTCCTACCCCAAGGAACACCTCTACCTCTCATTCCAATGCTAGTAATTATCGAAACTATCAGCCTATTCATTCAACCTATGGCCCTAGCCGTACGACTAACAGCCAACATTACTGCAGGTCACCTACTAATTCACCTAATCGGAGGAGCTACCCTTGCCCTCATAG---ATATTAGCACCACTACAGCATTCATTACTTTCATCATCCTTATCCTACTCACCATCCTCGAGTTTGCCGTAGCCCTCATTCAAGCCTATGTCTTCACACTACTAGTAAGTCTATACCTACATGACAATA +>Pteropus_scapulatus_NC_002619 +------------AATGAACGAAAATCTATTCTCCTCTTTCATTACCCCTAC---AATAATGGGCCTCCCCATTGTTACACTAATCATCATATTCCCAAGCATGCTATTCCCATCAACTAA---CCGACTAGTCAACAACCGCTTGGTCGCAATCCAACAGTGAATTATTCACTTAACATCCAAACAAATAATGGCGATTCATAACCAAACAGGACAAAAATGATCCTTAATGCTTATATCACTAATTCTATTTATTGGCTCAACAAACCTTCTAGGCTTATTACCACACTCCTTTACACCAACAACCCAACTATCAATAAACCTGGGGATAGCAATTCCCCTATGAGCAGGGACAGTAGCCTTAGGATTCCGCCATAAAACCAAAGCATCCCTAGCCCATTTTCTCCCCCAAGGGACCCCAATCCCTCTAATTCCTATACTTATTATTATCGAGACGATCAGCTTATTTATTCAACCTATAGCCCTAGCAGTACGATTAACCGCGAACATCACTGCCGGGCATCTACTAATTCACCTCATTGGAGGGGCCACTCTAGCTCTGATAGA---TATCAGCACAATAACGGCCCTAGTAACATTCATTATCTTAATTCTACTGACAATTCTCGAATTCGCAGTAGCCCTGATTCAAGCCTACGTGTTCACACTACTAGTAAGTCTATATTTACATGATAACAC +>Lepus_americanus_haplotype_ame_NC_024043 +------------ATGAACGAAAATTTATTCTCCTCTTTTACCACCCCAACA---ATAATAGGCTTACCAATCGTAATCCTAATCATCATGTTTCCAACTCTATTATTCCCTACCCCTACC---CGACTAATCAACAACCGACTAGTCTCAGCCCAACAATGATTAGCCCAATTAATTCTAAAACAAATAATAATAATACACTCCCCCAAAGGACGAACTTGGTCCCTTATACTAATCTCCCTAATTATATTCATCAGCTCAACTAATCTTCTAGGCCTCCTGCCCCACTCATTTACACCAACAACCCAGCTATCAATAAATCTAGGGATAGCTATTCCACTATGAGCAGGGGCTGTAATTACAGGCTTCCGTTACAAAACTAAAGCATCACTAGCCCACTTTCTCCCACAAGGTACACCTGTCCCTCTTATCCCCATACTAGTCATTATTGAAACAATTAGCCTATTCATTCAACCTATAGCCCTAGCTGTACGACTCACAGCCAACATTACAGCAGGTCACTTACTCATGCATCTTATTGGAGGTGCAGCACTAGCCCTGACCTCA---ATCAGTCCAACAACAGCCCTAATTACTTTTATTATCCTTATTCTCTTGACTATCCTGGAATTTGCTGTAGCCCTAATTCAAGCCTACGTTTTCACCCTTCTTGTAAGCCTTTATCTACATGATAACACC +>Nomascus_gabriellae_NC_018753 +------------TAATGAACGAAAATCTATTCGCTTCATTCGCTGCCCCCA---CAATCCTAGGCCTGCCCGCCGCAGTACCAATTATTCTATTCCCCTCTCTACTGATTCCCACCTCCA---AGTATCTCATCAACAACCGACTAGTTACCGCCCAACAGTGACTAATCCAACTAACCCTAAAACAAATAATAACAATACACAATGCTAAAGGACGAACCTGATCCCTCATGCTAATTTCCCTAATCACCTTCATTGCCACAACCAACCTACTCGGCCTCCTACCCCACTCATTCACACCAACCACCCAACTATCCATAAACCTGGCCATAGCAATTCCCCTATGAGCGGGCACGGTAACCACAGGTTTTCGTCTTAAAGCCAAAAACACCTTCGCTCACCTCCTACCCCAAGGCACACNTANACCTCTCATCCCCATACTAATTATCATTGAAACCATTAGTCTGTTTATTCAACCCATAGCCCTAGCCGTACGCCTAACCGCGAATATCACAGCAGGTCACCTACTAATACACCTAATCGGGGCAGCCACATTAGCCCTATCAA---CCATTAGTCTATCCGCAACACCCATCATCTTCACAGTCCTAGCCCTATTGACAATCCTCGAAATCGCCGTAGCTCTAATTCAAGCATATGTATTCACACTCCTGGTAAGCCTCTACCTGCACGACAACA +>Rattus_niobe_voucher_ABTC_47145_NC_023347 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAAC---AGTAATAGGTCTACCAATTGTCGTAACCATCATTATATTCCCATCAATTCTATTTCCATCATCAGA---ACGCCTAATTAGCAACCGCCTACACTCATTCCAACATTGACTAGTTAAACTTATCATTAAACAAATAATGCTGATTCACACACCGAAAGGACGAACCTGAGCACTAATAATCGTATCACTAATTATATTCATCGGCTCAACTAATCTTCTAGGTTTACTTCCCCATACATTCACCCCCACCACTCAACTGTCCATAAACCTAAGCATAGCCATCCCTCTATGAGCAGGGGCCGTAATCTTAGGATTTCGACACAAACTAAAAAACTCCCTAGCCCACTTCCTACCACAAGGAACACCTATCTCACTCATTCCCATACTAATCGTTATCGAAACTATCAGCCTATTTATTCAACCAATAGCACTAGCAGTACGACTAACAGCAAATATCACAGCAGGCCACCTATTAATACACCTGATCGGAGGAGCTACTCTAGTACTCATAAA---CATCAGCCCGCCAACCGCTACAATCACATTTATCATCCTTCTCCTACTTACAATGCTCGAATTCGCCGTAGCCTTAATTCAAGCCTACGTATTTACTCTCCTAGTAAGCCTGTACCTACATGATAACAC +>Lasiurus_borealis_NC_016873 +------------ATGAACGAAAATCTATTTGCCTCTTTCATCACACCAACG---ATAATAGGACTACCTATTGTAGTTTTGATTGTTATATTTCCTAGTATTCTCTTTCCATCCACCAAT---CGGCTGATTAACAACCGCCTGATCACAGTACAACAATGATTAGTTCGTCTAGTAACAAAACAAATGATATCTATCCACAATAAAAAGGGTCAAACTTGAGCTTTAATATTAATTTCATTGATCATATTTATTGGATCTACAAACTTACTGGGTTTATTACCCCACTCATTCACTCCAACAACTCAATTATCTTTAAATCTAGGTATGGCTATTCCTCTTTGAGCAGGGACTGTAATTTTAGGATTTCGCCATAAATTAAAAGCATCCCTTGCACACTTTTTACCACAAGGTACACCACTGCCTCTTATTCCAATATTAGTAATTATCGAGACTATTAGTTTGTTTATTCAACCTATAGCACTAGCAGTACGACTTACTGCAAACATTACCGCGGGTCATTTATTAATTCACTTAATTGGAAGCGCCACACTTGCTTTAATAGAT---ATCAGCATGACCACTGCCCTTATTACATTTATTATCCTAGTTATATTAACAATACTAGAATTTGCAGTTGCCCTAATTCAAGCTTATGTTTTTACTCTATTAGTCAGCCTTTATTTACACGACAACACC +>Elephantulus_sp_VB001_NC_004921 +------------TAATGAACGAAAATCTATTTGCCTCATTCATCACGCCTA---CACTAGCAGGCCTACCTATTGTAGTTCTCATTATTGCTTTTCCCAGCATTCTATTTCCCAACTCTA---ACCGCCTAATTAACAACCGATGGGTTGCAATTCAACAGTGATTAATTACTGTAATTCTTAAACAAATGATAATAATACATAATATTAAAGGACGAACATGATCACTGATACTGGTTTCCCTAATTTTATTTATTGGCTCAACAAATCTCCTTGGACTGTTACCTCATACATTCACCCCAACTACCCAACTATCAATAAATCTTGGCATAGCCATCCCATTATGAGCAGGAGCTGTAATTACAGGCTTCCGACACAAAACTAAGGCATCTCTAGCCCACTTTCTCCCACAAGGCACACCCATCCCTCTTATCCCTATACTCATTATTATTGAAACTATCAGCCTGTTTATTCAGCCCATAGCCTTAGCAGTGCGACTAACAGCTAACATTACTGCTGGACATTTACTAATTCACTTAATTGGAGGAGCAACCCTCGTATTAATGT---CAATTAGCACCCCCACTGCAATAATCACCTTCATTATCCTAATCCTACTTACCATCCTAGAATTCGCAGTAGCCTTAATCCAAGCTTACGTTTTCACTCTACTAGTCAGCCTCTACTTACATGATAATA +>Panthera_tigris_amoyensis_NC_014770 +------------AATGAACGAAAATCTATTCACCTCTTTCACTACCCCAAC---AATAATAGGATTGCCTGTTGTCGTATTAATTATTATGTTCCCCAGCATTCTAGTCCCCTCACCTAA---CCGACTAATTAATAACCGTTTAGTCTCACTTCGACAGTGATTAGTACAACTAACATCAAAACAAATACTAGCCATTCACAATCACAAAGGACAAACTTGGGCCCTAATACTCATATCTCTCATTTTATTTATTGGATCAACAAACCTGTTAGGTCTACTGCCTCACTCATTTACTCCAACTACCCAATTATCAATAAACTTAGGAATAGCTATTCCCCTATGAGCCGGTACCGTAATCACCGGGTTTCGCCACAAAACTAAAGCGTCCCTGGCCCACTTTCTACCACAAGGAACAGCAATCCCCCTGATCCCTATGCTTGTAATTATTGAAACCATTAGCCTTTTTATCCAGCCCGTGGCTCTGGCCGTACGACTTACAGCTAACATTACTGCAGGCCACCTATTCATACACTTACTTGGAGGAGCTGCTCTGGCCCTAACAAA---CATCAGTACCTCTATTGCTTTAATCACCTTTATTATCCTCATCCTACTGACAATCCTTGAATTTGCTGTGGCTCTAATCCAAGCCTACGTCTTTACCCTACTTGTAAGCCTGTATCTACATGACGATAC +>Sousa_chinensis_NC_012057 +------------ATGAACGAAAATCTATTTGCCTCTTTCATAATCCCAGTT---ATACTAGGAGTTCCTATTACTACCCTAATTATTATATTTCCCACCATGCTATTTCCAACACCAAAT---CGATTAATCAATAACCGCATGATTGCTATCCAACAATGACTTACCAAACTCACATCAAAACAACTAATAATTACACATAGCCCCAAAGGACAAGCCTGATCCCTAATACTCATCTCACTTTTCCTTTTCATCGCTTCCACAAACCTTCTTGGAATATTACCCCACTCATTCACGCCTACTACTCAACTCTCTATAAATTTAGGCATAGCTATTCCATTATGAGCTGGCACCGTCTTTATTGGCTTCCGTAATAAGACAAAAATATCCCTAGCTCACCTTTTACCATTAGGCACACCCACTTTCCTAATTCCTATATTAGTAATAATCGAAACTACTAGCCTATTTATTCAACCCTTAGCCCTAGCAGTGCGGCTAACAGCGAATATCACAGCAGGTCACCTACTACTACATCTAATTGGAAGCGCAACCCTTGCATTAATAAAC---ATTAGTCTATTCACAGCTCTCATCACATTTATCATTCTCACCCTATTAATCATCCTCGAATTCGCTGTAGCTCTAATCCAAGCCTACGTATTCACCCTACTAGTAAGCCTATACTTGCAAGACAATACA +>Macaca_fuscata_NC_025513 +------------TAATGAACGAAAACTTGTTTACCTCTTTCTCAACCCCAA---CAATTCTAAACCAACCCGCTGCAATCCCCATTATCCTATTCCCCACCCTATTAGTCCTAACCCCCA---AACACCCCATTAATAATCGACTAGCTACCATTCAACAAGACCTGACTCGATTCATCCTAAAACAAATAATAATAACTCACAACGCTAAAGGACAAACCTGATCCTTAATACTAATATCCCTAATCACCTTTATTGCTATAACAAACCTCCTAGGACTTATACCTTACTCGTTTACACCAACCACCCAACTTTCCATAAACCTAGCTATAGCAATCCCCCTATGAGCAGGCACAGTAGTAGTGGGGCTTCGCTTTAAAACCAAAAACTCCCTAGCCCACCTCCTACCACAAGGCACACCCACACCTCTCATTCCCATGTTAGTAGTAATCGAAACTATCAGCCTACTTATTCAACCAGTAGCTCTAGCCGTACGATTAACCGCAAACATCACAGCCGGCCATCTGCTAATACACCTAATCGGAAACGCTGTGCTAGCACTATCAA---CCGCCAACCTCTCCATAACTCTGCTAACCTCCACACTTCTGGTGTTACTAACCACTCTAGAAATTGCAGTAGCCCTAATTCAAGCCTACGTCTTCGCACTCTTAATTAGCCTTTATCTACATAACAACA +>Gorilla_gorilla_gorilla_NC_011120 +------------AATGAACGAAAATTTATTCGCTTCATTCATTGCCCCCAC---AATCCTAGGCTTACCCGCCGCAGTATTAATTATCCTACTTCCCCCTCTACTGATCCCCACCTCCAA---ATATCTCATCAACAACCGACTGATTGCCACCCAACAGTGACTAATCCAACTAACCTCAAAACAAATAATAACTATACATAACGCCAAGGGACGAACCTGATCCCTTATGTTAATATCATTAATTATTTTTATTGCCACAACCAACCTCCTCGGACTCTTGCCCCACTCATTCACACCAACTACCCAGCTATCTATAAACCTGGCCATAGCCATCCCCCTGTGAGCAGGCGCAGTAACTACAGGCTTTCGCTCCAAGACTAAAAATGCCCTAGCCCACCTACTACCACAAGGCACCCCTACACCCCTTATCCCTATACTAGTCATCATTGAAACCATCAGCCTATTCATCCAACCAATAGCCCTAGCTGTACGCCTAACCGCTAACATCACTGCAGGTCACCTACTTATGCACCTAATCGGAAGCGCCACACTAGCAATATCAAC---TACCAATCTTCCCTCAACACTCATTATCTTTACAGTCCTAATTTTATTAACTATACTAGAAATCGCTGTCGCCCTCATCCAAGCCTACGTTTTCACACTTTTAGTGAGCCTCTACCTGCACGAGAACAC +>Petaurista_hainana_NC_023089 +------------ATGAACGAAAATTTATTCGCCTCTTTCATTACCCCCACA---CTAATAGGCTTACCCATCATTGTCCTAATTATTTCATTCCCTAATATTCTATTTCCCTCACCAAAT---CGACTAGTAAACAATCGACTAGTATCCTTTCAACAATGACTTGTTCAACTTGTACTTAAACAAATAATGGCTATGCATAATCTAAAGGGACGAACCTGATCCCTAATACTCATCTCCCTTATCATATTTATCGGCTCGACCAATCTATTGGGACTCCTACCTCACTCGTTTACACCCACAACACAACTATCTATAAACCTTGGTATGGCAATTCCCCTGTGAGCAGGTGCAGTAATCACTGGATTTCGTCATAAAACCAAAGCATCTCTTGCCCATTTTCTTCCACAAGGAACCCCCATTCCCCTTATCCCCTTACTTGTCATTATTGAAACAATTAGCCTTTTTATCCAGCCAATAGCCCTAGCCGTCCGTCTCACTGCCAATATCACAGCAGGCCATCTACTCATACACTTAATTGGAGGAGCTACCCTAGTCTTAACCTCT---ATCAGCCCTCCTACCGCAATAATCACCTTTATTATTCTAATCTTACTAACAATTCTTGAGTTCGCCGTAGCACTAATTCAAGCATATGTATTCACACTTCTCGTAAGCCTTTACTTACACGATAACACT +>Callimico_goeldii_NC_024628 +------------TATGAACCAAAATTTATTTGCCTCCTTTAACATTCCCAC---AATCTTAGGGATCCCCCTAGTAATACTAATTATCATATTCCCTACTATTCTCCTCACACCCTCTAA---AAACCTAATTAAAAATCGACTTTCTTCTCTTCAACAATGGCTAATTCAACTTACACTAAAACAAATAATAACAACTCATACAACCAAAGGTCGAACTTGATCTCTCATACTTCTTGCTCTGATTACCTTCATTGCCTTAAATAATATTCTTGGACTCACACCCTACGCATTCACACCAACTACTCAACTATCAATAAATTTAGGCATGGCAGTTCCTCTATGAATAGCAACTGTACTCTTAGGCCTGCGACATAAAACAAAATCATCCCTTGCTCACTTTCTACCACAAGGAACACCTGCACCCCTTATTCCAATGTTAATTGTTATCGAAACAATTAGTCTTTTTATTCAACCAGTAGCCCTAGCTGTACGACTAACAGCTAATATTACAGCAGGTCACCTATTAATACATCTACTCGGAGACACTACACTAACCCTTATGTC---CATTTACCCAGCCTCCTCCACAATTACTACTATTATTATTGTTTTACTAGTAACTCTAGAACTGGGTGTAGCACTTATTCAAGCTTATGTGTTTACACTCTTAGTAAGCCTGTATCTACACGACAACTC +>Tragulus_kanchil_isolate_NLVD83_NC_020753 +------------ATGAACGAAAATTTATTTGCCTCTTTCATTACCCCAACA---CTCCTAGGCCTCCCCATCGTAATTCTAATTATCATATTCCCGGCCATCATATTCCCAACTTCAAAC---CGCTTGGCCAATAATCGCCTAGTCTCTCTCCAACAATGATTAATCCAACTAACAACTAAACAAATGTTAGGTATACATAACAAAAAAGGACAAACCTGAGCCCTAATGCTTATATCACTAATTATATTCATTGGATCTACTAACCTATTAGGCCTACTGCCACACTCATTTACACCCACTACACAACTATCAATAAACCTAGGAATAGCAATCCCCCTATGAGCAGGAACCGTAATCATAGGCTTTCGCAACAAAACTAAAAAATCTCTAGCTCATTTCTTACCGCAAGGCACACCAACTCCTTTAATCCCAATACTCATCATTATCGAAACAATCAGCCTTTTTATTCAACCAGTGGCCCTGGCCGTACGACTAACAGCTAACATCACAGCAGGCCACCTGCTTATGCACCTAATCGGAGGAGCTACTCTTGTACTTATGAAC---ATTAGCACCACCACAGCCCTCATCACGTTTATCATCTTAATGCTACTAACCATACTTGAATTTGCCGTAGCTATAATCCAAGCCTACGTCTTTACTCTATTAGTTAGCCTCTACTTACACGATAACTCA +>Acomys_cahirinus_isolate_E03_NC_020758 +------------TAATGAACGAAAATCTATTCTCCTCATTCATTACCCCCA---CACTAATAGGCCTACCTGTAGTCATTATTATTATCACACTCCCCTTCATCATGTTCCCTAACTCAA---AACGCCTCTTTAACAACCGCCTAATTTCTCTTCAACAATGACTAATTAAACTAATTATAAAACAAATAATACTAATCCACACACCAAAGGGTCGAACCTGGTCACTAATAATCATTTCCCTAATTATATTTATTGGATCAACTAACCTACTAGGCCTCCTCCCCCACACATTCACGCCTACCACCCAACTATCTATAAATCTCAGCATAGCTATCCCCTTGTGAGCTGGAGCTGTGATCATAGGATTCCGCCATAAACTAAAAGACTCACTAGCCCACTTTCTCCCCCAAGGTACCCCCATTACCCTTATTCCCATACTTATCATCATCGAAACAATTAGCCTATTTATCCAACCCATGGCCCTAGCAGTTCGCCTCACAGCCAACATTACCGCAGGCCACCTACTCATACACTTAATTGGAGGAGCCACACTAGTACTCATAA---GCATTAGCCCGCCAACCGCCCTAATTACATTCATTATTCTCCTACTCCTAACCGTATTAGAATTTGCTGTAGCACTAATTCAAGCCTATGTATTTACTCTACTAGTAAGCTTATATCTACATGATAACA +>Naemorhedus_caudatus_NC_013751 +------------AATGAACGAAAATTTATTTACCTCTTTCATTACCCCAAT---AATACTAGGCCTTCCCCTCGTTACCCTTATTGTCCTATTTCCTAGCTTACTATTTCCCACATCAAA---CCGATTGATTAATAACCGCCTCATCTCCCTCCAACAATGGGTACTTCAACTCGTGTCAAAACAAATAATAAGCATTCACAACATCAAAGGACAAACATGAACATTAATACTAATATCCTTAATTTTATTTATTGGATCTACAAATTTATTAGGTTTACTACCCCACTCATTTACACCAACAACACAACTATCAATAAACTTAGGTATGGCTATTCCCCTATGAGCAGGAACCGTAATCACAGGCTTTCGCAATAAAACTAAAGCATCACTTGCTCATCTTCTACCACAAGGAACACCAACCCCATTAATCCCAATGCTAGTAATTATCGAAACCATTAGCCTCCTCATCCAACCAATAGCCCTTGCTGTACGACTAACGGCTAATATCACGGCAGGACATTTATTAATTCACTTAATTGGAGGAGCTACTCTCGCATTAATAAG---TATCAGTACCACAACAGCACTAATCACATTTATTATTCTAGTTCTGCTAACAATTCTAGAATTCGCTGTAGCTATAATTCAAGCCTACGTATTTACCCTCCTAGTTAGCTTATACCTGCATGATAACAC +>Lepus_europaeus_NC_004028 +------------ATGAACGAAAATCTATTCTCCTCTTTTATTACCCCAACA---ATAATAGGCTTACCAATCGTAATCCTAATCATCATATTTCCAACCCTACTATTTCCTATCCCTACC---CGACTAATCAATAACCGGCTAGTCTCAGCTCAACAATGATTGGCCCAATTGATTCTAAAACAAATAATAATAATGCACTCCCCCAAAGGACGAACCTGGGCTCTCATACTGATCTCCCTAATTATATTTATTGGCTCAACTAACCTACTAGGCCTCTTACCTCATTCATTTACACCAACAACCCAATTATCAATAAACCTAGGGATAGCTATCCCATTATGAGCAGGGACTGTAATTACAGGATTCCGTTATAAAACTAAGGCATCACTAGCCCACTTTCTCCCACAAGGAACACCTGTACCCCTTATTCCCATGCTAGTAATTATTGAAACAATTAGTCTATTTATTCAACCCATAGCCTTAGCTGTACGACTTACAGCCAACATTACAGCAGGTCACTTACTTATACACCTCATTGGAGGCGCAGCACTTGCCTTAATCTCA---ATTAGTCCAACAACAGCCCTAATTACTTTTATTATTCTAATTCTCCTAACAATCCTAGAATTTGCTGTGGCCCTAATTCAAGCCTACGTTTTCACCCTTCTTGTAAGCCTATATCTACATGATAATACT +>Madoqua_saltiana_isolate_AWWP_NC_020718 +------------TAATGAACGAAAATTTATTTGCCTCTTTCATTACCCCTA---TAGTACTAGGCCTTCCCCTCGTTACCCTCATTGTCCTATTTCCCAGCCTACTATTTCCAACATCAA---ACCGACTATTAAACAACCGCCTTATCTCTCTTCAACAATGAGCTCTTCAACTTGTATCCAAACAAATGATAAGCATTCATAATCCTAAAGGACAGACATGAGCGTTAATATTAATATCCCTAATCCTATTTATTGGGTCAACAAATTTACTAGGCCTATTACCCCACTCCTTCACACCAACCACACAACTATCAATAAATCTAGGCATAGCCATTCCCCTATGAGCAGGAGCTGTAATCACAGGCTTTCGCAACAAAACGAAAGCATCGCTTGCTCATTTTCTGCCACAAGGGACGCCAACTCCTTTAATCCCTATACTAGTAATTATTGAAACTATTAGCTTATTCATTCAACCAATAGCTCTTGCCGTACGATTAACAGCTAACATTACAGCAGGTCACTTACTAATTCACTTAATTGGAGGAGCTACCCTCGCACTCATAA---GTATCAGCCCTACCACGGCCTTCATCACATTTATTATTCTAATCTTACTTACAATTCTTGAATTTGCAGTTGCCATAATTCAGGCCTACGTCTTTACCCTTCTAGTTAGCCTATATCTACACGACAACA +>Mus_musculus_castaneus_NC_012387 +------------AATGAACGAAAATCTATTTGCCTCATTCATTACCCCAAC---AATAATAGGATTCCCAATCGTTGTAGCCATCATTATATTTCCTTCTATCCTATTTCCATCCTCAAA---ACGCCTAATCAACAACCGACTCCATTCTTTCCAACACTGACTAATTAAACTTATTATTAAACAAATAATGCTAATCCACACACCAAAAGGACGGACATGAACCCTAATAATTGTTTCCCTAATCATATTTATTGGATCAACAAATCTCCTAGGCCTTTTACCACATACATTTACACCCACCACCCAACTATCCATAAATCTTAGTATAGCCATTCCACTATGAGCTGGAGCCGTAATTACAGGCTTCCGACACAAACTAAAAAGCTCACTTGCCCACTTCCTTCCACAAGGAACTCCAATTTCACTAATTCCAATACTTATTATTATTGAAACAATTAGCCTATTTATTCAACCAATGGCATTAGCAGTCCGGCTTACAGCTAACATTACCGCAGGACACTTATTAATGCACCTAATCGGAGGAGCTACTCTAGTACTAATAAA---TATTAGCCCACCAACAGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTCGCAGTAGCATTAATTCAAGCCTACGTATTCACCCTCCTAGTAAGCCTATATCTACATGATAATAC +>Muntiacus_reevesi_micrurus_NC_008491 +------------ATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAATA---ATTCTAGGCCTTCCGCTCGCCACCCTTATTGTTATATTTCCTAGTCTATTATTTCCAACATCAAAC---CGTTTAGTAAATAACCGCCTTATTTCCCTCCAACAATGAGCACTCCAGCTTGTGTCAAAACAAATAATAGGTATCCATAATACTAAAGGACAAACATGGACATTAATACTCATATCTCTAATCCTATTCATTGGATCCACAAATCTTCTAGGCCTATTACCTCATTCATTTACACCAACTACACAACTATCAATAAACCTAGGTATGGCCATCCCCCTATGAGCAGGAGCTGTAATCACTGGCTTCCGCAACAAGACCAAAGCATCGCTTGCCCATTTTCTCCCACAAGGAACACCAACCCCATTAATTCCTATACTAATTATTATTGAGACCATTAGTCTTTTTATTCAACCAATTGCCTTAGCTGTGCGACTAACGGCCAACATTACTGCAGGACACCTGCTAATTCACCTAATTGGAGGAGCCACACTTGCACTAATAAGC---ATCAGTACTACAACAGCCCTCATCACATTCATTATTCTAGTACTGCTTACAATTCTTGAGTTCGCAGTAGCCATAATTCAAGCTTACGTATTCACCCTTCTAGTTAGCCTTTATCTGCATGACAACACA +>Cervus_nippon_hortulorum_NC_013834 +------------TAATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAA---TAATACTAGGCCTTCCACTAGCTACTCTCATCGTTATATTTCCTAGCCTATTATTTCCAACATCAA---ATCGTCTAGTAAATAACCGTCTTATTTCCCTCCAACAATGGGTACTTCAACTTGTATCAAAACAAATAATAGGAATTCACAATGCCAAAGGACAAACATGAACACTAATACTCATGTCTCTAATCTTATTTATTGGATCCACAAATCTTCTGGGCTTATTACCCCACTCATTTACACCAACCACACAATTATCAATAAACCTAGGCATGGCCATTCCTCTGTGAGCAGGAGCTGTAATTACAGGTTTCCGTAATAAAACTAAAGCATCACTTGCCCACTTTCTTCCACAAGGAACTCCAACCCCACTAATTCCCATACTAGTTATTATCGAAACTATTAGTCTTTTTATTCAACCAATCGCTTTAGCCGTACGACTAACAGCCAATATTACTGCAGGACACCTACTAATACACCTAATTGGAGGAGCTGCACTTGCACTAATAA---ATATCAGCACTACAATAGCTTTTATCACATTCATTATTCTAGTCCTACTCACAATCCTTGAGTTTGCAGTGGCCATAATTCAAGCCTACGTATTTACCCTTCTAGTCAGCCTTTACTTGCATGACAACA +>Tragelaphus_eurycerus_isolate_SUN8_NC_020749 +------------AATGAACGAAAACCTATTTGCCTCTTTCATTACCCCAGT---AATTTTAGGCCTCCCTCTTGTAACTTTCATCGTCTTATTCCCCAGCCTATTATTTCCAACATCAAA---TCGACTAGTAAACAATCGCCTTATCTCTCTCCAACAATGAGCACTCCAACTTGTATCAAAACAAATAATAACAATCCACAATACTAAAGGACAAACATGAACGTTAATATTAATATCCCTAATTCTATTCATTGGGTCAACAAACCTACTAGGTCTCCTACCCCACTCATTTACACCAACCACGCAACTATCAATAAACCTGGGTATAGCCATCCCCCTGTGAGCAGGAGCTGTTATCACAGGATTTCGTAACAAAACCAAAGCAGCACTCGCCCACTTCCTACCACAAGGGACACCAACCCCACTAATTCCAATACTAGTTATCATCGAAACTATCAGCCTTTTTATTCAACCAATAGCCCTTGCCGTACGACTAACAGCCAACATCACTGCAGGTCACCTACTGATTCACCTGATTGGAGGAGCTACACTCGCACTAATGAA---CATCAGCACCACAACAGCTTTCATCACATTTACTATTCTAGTCCTATTAACAATCCTAGAATTCGCAGTAGCCATAATTCAAGCCTATGTATTTACCCTCCTAGTTAGCCTATACCTACACGACAACAC +>Rattus_norvegicus_strain_BN/SsNHsdMCW_NC_001665 +------------ATGAACGAAAACCTATTTGCCTCTTTCATTACCCCCACA---ATAATAGGTCTACCAATTGTTGTAACCATTATTATGTTCCCATCAATTCTATTCCCATCATCAGAA---CGCCTAATCAGCAACCGACTACACTCATTTCAACACTGACTAATCAAACTTATCATCAAACAAATAATGTTAATCCACACACCAAAAGGACGAACCTGAGCCCTAATAATTGTATCCCTAATTATATTTATTGGCTCAACCAACCTTCTAGGGCTTCTTCCCCATACATTTACCCCTACCACTCAGCTATCTATAAACCTAAGCATAGCCATCCCCCTATGAGCAGGAGCCGTAATTCTAGGCTTCCGACACAAACTAAAAAATTCTTTAGCCCACTTCTTACCGCAAGGAACCCCCATCTCCCTAATTCCCATACTAATTATCATCGAAACTATCAGCCTATTTATTCAACCGATAGCACTAGCAGTACGACTAACAGCAAACATTACAGCAGGCCATCTATTAATGCATCTAATCGGAGGAGCTACTCTAGTACTTATAGAC---ATCAGCCCACCAACCGCTACAATTACATTTATTATTCTACTTCTACTTACAGTACTTGAATTTGCCGTAGCCTTAATTCAAGCCTATGTATTCACCCTTCTAGTAAGCCTGTACCTACATGATAACACA +>Boselaphus_tragocamelus_NC_020614 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTGCCCCTA---TAATTTTAGGCCTCCCCCTTGTAACCCTAATTGTCCTATTTCCCAGCCTATTATTTCCTACCTCCA---ATCGACTGACAAACAACCGCCTAATCTCTCTTCAACAATGAATCCTACAACTTATTTCGAAACAAATAATAAGCATCCATAATACTAAAGGACAAACATGAACACTAATACTAATATCCTTAATCCTGTTCATCGGGTCAACAAACCTATTAGGCCTTCTACCCCATTCCTTCACACCAACCACTCAACTATCAATAAATCTAGGCATAGCTATCCCCCTGTGAGCAGGAGCTGTAATCACAGGCTTTCGCAACAAAACTAAAGCTTCACTAGCCCACTTCCTACCACAAGGAACACCAACCCCACTAATCCCGATACTAGTCATTATTGAAACTATTAGCCTTTTCATCCAACCAATTGCCCTCGCCGTACGACTAACAGCCAACATTACTGCAGGTCACCTATTAATTCACCTAATCGGAGGAGCCACACTCGCACTTATAA---GTATTAGTACTACAACAGCTCTCATTACATTTATTATCCTAGTCCTATTAACAATTCTCGAGTTCGCAGTAGCCATAATTCAAGCCTACGTATTCACACTTTTAGTCAGCCTATACTTGCATGACAACA +>Cervus_elaphus_xanthopygus_NC_013836 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAAT---AATCCTAGGCCTTCCACTAGCTACTCTCATCGTTATGTTTCCTAGCCTATTGTTTCCAACATCAAA---TCGTCTAGTAAATAACCGTCTTATTTCCCTCCAACAATGGGTACTTCAACTTGTATCAAAACAAATAATAGGAATTCACAATGCCAAAGGACAAACATGAACACTAATACTCATATCTCTAATCTTATTTATTGGATCCACAAATCTTCTGGGCTTATTACCCCACTCATTTACACCAACTACACAATTATCAATAAACCTAGGCATAGCCATTCCCCTGTGAGCAGGAGCTGTAATTACAGGCTTCCGTAATAAAACTAAAGCATCGCTTGCCCACTTTCTTCCACAAGGAACTCCAACCCCATTAATTCCCATACTAGTTATTATCGAAACTATTAGTCTTTTTATTCAGCCAATCGCTTTAGCCGTACGACTAACAGCCAATATTACTGCAGGACACCTACTAATTCACCTAATTGGAGGAGCTGCACTTGCACTAATAAG---CATCAGTACTACAATAGCTCTTATCACATTTACTATTCTAGTCCTACTCACAATCCTTGAGTTTGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTTCTAGTCAGCCTTTACTTGCATGACAACAC +>Balaenoptera_acutorostrata_NC_005271 +------------ATGAACGAAAATTTATTTGCCCCTTTTATAATCCCAACA---ATACTAGGCATTCCCGTTATCACTCTAATTATCATCCTCCCATCTATCCTATTTCCCACACCAAAC---CGACTAGTCAACAACCGTACAATCTCCATTCAACAATGACTGACTAAACTCACATCAAAACAATTAATAAGTGTACACAGTCCTAAAGGACAAACTTGATCTCTAATACTCATCTCACTATTCCTATTTATTGCCTCTACTAATCTCCTTGGAATGTTACCTCATTCATTTACACCTACCACTCAACTCTCAATAAACGTAGGAATAGCTATCCCCCTATGGGCCGGTACCGTTATCACAGGCTTCCGCAACAAAACAAAAATATCTCTAGCACATCTGCTACCACAAGGTACGCCCACCTTTCTCATCCCTATATTAGTAATTATTGAAACTATTAGCCTATTCATTCAACCAGTAGCACTAGCCGTACGACTAACCGCCAACATCACAGCAGGTCACTTACTAATACATCTAATTGGAGAAACAACCCTTGTATTAATAAAT---ACCAGCTTCTTAATAGCACTCATCACTTTCACTATCCTTGCTCTATTAACTATTCTTGAATTCGCTGTAGCCCTAATTCAAGCTTACGTATTTACCCTCCTAGTCAGCTTATACCTCCATGATAACACA +>Thylacinus_cynocephalus_NC_011944 +------------TAATGAACAAAAATTTATTTGCCTCTTTCATCTGTCCTA---ACATCATAGGACTATCTACATTACCAATCATTATCATATTACCATGCTTAATGTTCACAGCCCCTA---AACGGTGACTTCCAAACCGTATTCAAATTTTACAAATTTGACTCATCCGATTAATCACCAAGCAAATAATGTCTATACATAGTAAGCTTGGCCGAACTTGATCCTTAATACTTATTTCTCTAATTCTATTCATTGCATCAACTAACTTACTTGGTCTACTTCCCTACTCATTTACCCCTACTACACAACTTTCGATGAATCTCGGTATAGCTATTCCACTCTGAATAGGCACAGTAATTCTAGGATTACGAAAAAAACCTAAAGCATCTCTAGCCCATTTTCTCCCTCAAGGTACACCCACTCCACTTATCCCAATACTTATTATCATCGAAACCATCAGTCTATTCATCCAACCGATCGCATTAGCAGTACGACTTACAGCTAACATTACTGCTGGCCATCTTTTAATACACCTTATCGGCTCAGCAACTCTAGCACTTGCCT---CCATTAACATTATAATCTCATCAATTACTTTCACTATTCTTCTATTACTTACTATTCTTGAACTAGCAGTAGCCATCATCCAAGCATACGTATTTACCCTATTAGTTAGCCTTTATCTACATGATAACT +>Saimiri_sciureus_NC_012775 +------------AATGACCCAAAACTTATTCACCATCTTTAATATCCCAGT---AGTCCTAGGAATACCCCTAGCAGTACTAATTATTATATTTCCCTCCATACTAATCTTACCCCCTAA---CAACACTATCAACAACCGATTCTCATCCATTCAACAATGACTAGTCCAGCTCACACTAAAACAAATAATAATCACCCATTCTACTACAGGACGAACCTGATCTCTAATACTCCTAACCCTAATTACCTTTATTTCCTTAAATAACCTTCTTGGACTCACACCCTACGCATTTACACCCACCACTCAACTATCAATAAATATTGGTATAGCAATCCCACTATGAATAGCAACCGTACTTATAGGACTTCGACTTAAAACAAAAACATCCCTTGCTCACTTTCTGCCCCAAGGAACACCAACTCTACTCATTCCCATGCTCATCATCATTGAAACCATTAGCCTCTTTATTCAACCAGTAGCACTAGCAGTACGGCTAACAGCAAACATTACAGCAGGTCACCTACTAATACACCTATTAGGGACTGCTTCACTCACCCTTCTATC---TATTTACCTCTCTTCCTCTCTAGCTACTATTATCGTCATTATCTTACTAATTACCCTAGAATTAGGCGTAGCCCTAATCCAAGCTTACGTCTTCACACTTCTAGTCAGTCTTTACCTACACAACAATTC +>Equus_grevyi_NC_020432 +------------ATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCAACA---ATAATAGGCCTCCCTATTGTAATTCTAATCATCATATTCCCCAGCATCCTATTCCCTTCATCCAAC---CGACTAGTCAACAACCGCTTAATCTCAATTCAACAATGACTAGTCCAACTTACATCAAAACAAATAATAGCTATCCACAACAACAAAGGACAAACCTGAACCCTTATACTCATGTCGCTGATTCTATTTATTGGCTCAACAAACTTACTGGGTCTACTACCTCACTCATTTACACCAACAACACAACTATCGATAAACCTAGGCATAGCTATTCCCCTGTGAGCAGGAACAGTATTCATAGGCTTTCGTCATAAAACAAAAGCAGCCCTAGCCCACTTTCTACCTCAAGGAACACCTATTTTCCTCATTCCCATACTAGTAATTATTGAAACCATCAGCCTATTTATTCAACCTGTAGCTCTAGCCGTTCGGCTAACTGCTAATATTACTGCCGGACATCTTCTAATCCACCTTATCGGAGGAGCAACACTAGCCCTTATAAAC---ATTAGCCCCTCAACAGCTCTTATTACATTTATTATCCTGATCCTACTGACTATCCTCGAATTCGCAGTAGCCATAATCCAAGCCTACGTATTCACCCTCCTAGTAAGCCTCTACCTACATGATAACACC +>Cercopithecus_albogularis_NC_021944 +------------TAATGAACGAAAATCTATTTACTTTATTCACGACCCCAA---CAATTCTAAACCAACCTGCTACTATCCCCATCATTCTATCCCCCATGCTACTAATCCCAACATCCA---AACATCTCATTAACAATCGACTAATCACCATTCAACACAACCTAATCCAACTTACTCTAAAACAAATAATAATTAACCATAATGCTAAAGGACAAACATGATCTCTAATGCTAGCATCCCTAATCACCTTTATTATCATAACTAACCTCCTAGGACTCCTACCCCACTCATTTACACCCACCACCCAACTATCTATAAACCTAGCAATAGCAATCCCCCTATGAGCAGGTACAGTAATCACAGGTCTTCGCTTTAAAACCAAAAATTCCCTGGCCCACCTCCTTCCACAAGGTACACCAACACTACTTATTCCCATGTTGGTATTAATCGAAACTACCAGCCTATTCATTCAACCAGTAACCCTAGCCGTACGCCTAACTGCTAACATTACAGCTAGTCACCTACTAATGCACTTGATTGGAAACGCCATGTTAGCACTACTAA---CCATCAACCTCCCCATTGCCTTACTAACCTCCATACTCCTAATACTACTTACCACCCTAGAGATCGCAGTTGCCCTAATTCAAGCCTACGTATTTACACTTTTAGTTAGCCTCTACTTGCATAACAACA +>Axis_porcinus_isolate_CYTO_NC_020681 +------------AATGAACGAAAATTTATTTGCCTCTTTCATTACCCCAAT---AATTCTAGGCCTCCCACTCGCCACTCTCATCGTTATATTCCCTAGCCTACTATTTCCAACATCAAA---TCGTCTAGTAAATAATCGCTTTATTTCTCTCCAACAATGAATACTTCAACTTGTATCAAAGCAAATAATAGGAATTCACAATGCCAAAGGGCAAACATGAGCATTAATGCTCATATCTTTAATTCTATTCATTGGATCTACAAATCTCCTGGGCCTATTACCCCACTCATTTACACCAACCACACAATTGTCAATAAATTTAGGCATAGCCATTCCCCTGTGAGCAGGGGCTGTAGTTACAGGCTTCCGCAATAAAACTAAAGCATCACTTGCTCATTTTCTTCCACAAGGAACTCCAACTCCATTAATTCCCATACTAGTTGTTATTGAAACTATCAGCCTTTTTATTCAACCAATCGCCCTAGCCGTGCGATTAACAGCTAATATTACTGCAGGACACCTACTAATTCACCTAATTGGAGGGGCTACACTTGCACTAATAAG---CATTAGTACTACAACAGCCCTAGTTACATTCACCATTCTAGTGCTACTCACAATTCTTGAATTTGCAGTAGCCATGATTCAAGCATATGTATTTACTCTTCTAGTTAGCCTCTACTTGCATGACAACAC +>Alcelaphus_buselaphus_isolate_SUN_NC_020676 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTATA---GTACTAGGCCTCCCCCTTGTTACTCTTATCGTCTTATTCCCCAGCCTACTATTTCCTACATCAAAC---CGACTGATCAACAACCGCCTTATCTCCCTCCAACAATGAGTACTTCAACTCGTATCAAAACAAATAATGAGCATTCACAACACCAAAGGGCAAACATGGGCATTAATATTAATATCCCTAATCCTATTTATTGGATCTACAAATCTTCTAGGTCTATTACCCCACTCATTTACACCAACCACACAACTATCAATAAACTTAGGCATGGCCATCCCCCTATGAGCAGGGGCAGTAATTACAGGCTTCCGCAACAAGACTAAAGCATCACTTGCCCACTTCCTACCACAAGGAACACCAACCCCACTAATTCCAATACTAGTAATTATCGAAACCATTAGCCTTTTTATCCAACCAATAGCCCTCGCCGTACGATTGACAGCCAACATCACAGCAGGACATCTATTAATTCACCTGATCGGAGGAGCCACCCTTGCACTAATGAGC---ATCAGCACTACAACAGCTCTTATCACCTTCATTATTCTAGTCCTACTAACAATTCTCGAATTCGCAGTAGCCATAATTCAAGCCTACGTGTTCACCCTCCTAGTCAGCCTGTACCTGCACGATAACACA +>Rangifer_tarandus_NC_007703 +------------TAATGAACGAAAATCTATTTGCCTCTTTTATTACCCCAG---TAATTCTAGGCCTTCCACTTGCTACCCTAATCGTTATATTTCCTAGCCTACTGTTTCCAACATCAA---ATCGTCTAGTAAATAACCGTCTCATTTCTCTTCAACAATGAGCACTTCAACTCGTATCAAAACAAATAATAGGGATTCATAACGCCAAAGGACAAACATGGACATTAATATTAATATCACTAATTATATTTATTGGATCAACAAATCTTCTAGGCCTATTACCTCACTCATTTACACCAACCACCCAACTATCAATAAACTTAGGTATAGCCATCCCCTTATGAGCAGGAACTGTAGTTACGGGCTTCCGCAATAAAACTAAAGCATCACTAGCCCACTTCCTTCCACAAGGAACACCCGCTCCATTAATTCCCATGCTAGTTATTATCGAGACCATTAGTCTTTTTATTCAACCAGTCGCCCTAGCTGTACGATTAACAGCTAATATTACCGCAGGACATCTACTAATTCATCTAATCGGAGGAGCTACACTTGCATTAATAA---GTATTAGCACTACAATAGCCCTTATCACATTTATTATCCTAATTCTACTCACAGTCCTTGAATTCGCAGTAGCTATGATTCAGGCATATGTATTTACCCTTCTAGTTAGCCTCTACGTGCATGACAACA +>Herpestes_javanicus_NC_006835 +------------AATGAACGAAAATCTATTCGCCTCTTTCACTACCCCAAC---AATAATAGGACTTCCCGTCGTAATCCTTATTATTATATTCCCAAGCATCATATTCCCTGCACCAAA---TCGATTAATTAACAATCGCCTAATCTCACTCCAACAATGACTAATCCAACTTACATCAAAACAAATACTAGCTATTCACAACCACAAAGGACAGACATGAGCCCTCATACTAATATCCCTGATTCTATTTATCGGCTCAACTAATCTACTGGGCCTTCTTCCACACTCATTTACGCCCACAACACAACTATCAATAAACCTAGGAATGGCCATTCCCCTATGAGCCGGTACAGTAATTATGGGATTCCGACACAAGACAAAATCATCCCTAGCCCATTTTCTACCCCAAGGAACACCTTTACCACTAATTCCAATGCTTGTAGTTATTGAAACTATTAGCCTATTTATTCAACCAATAGCCCTGGCTGTACGACTTACAGCCAACATCACTGCAGGCCACCTACTAATTCACCTAATCGGAGGGGCTACCCTAGTCTTAATAAA---TATCAGTACTTCTATTGCTTTCATTACCTTTATTATCCTTATTCTATTGACAATTCTTGAATTTGCCGTAGCCCTAATTCAAGCCTATGTATTTACATTGCTGGTAAGCCTATACCTACATGACAACAC +>Trachypithecus_vetulus_NC_019582 +------------ATGAACGAAAATTTATTTGCCCCCTTCACAACTCCATCA---TTCCTAGGCCTGCCCGCTGTAATTCCCATTATTCTATTTCCTATACTATTAATTCCAACTTCTAAA---GATCTTATCAACAACCGATTAGTTACTATTCAACAAAACCTGATTCAAGCAGTTCTAAAACAAATAATAATAACGCAAAACACCAAAGGGCAATCCTGGTCTCTAATATTAATATCCTTATTTATTTTTATTGCTATAACCAATCTCCTCGGACTTTTACCTCATTCATTCACCCCCACCGCTCAACTATCCATAAATCTAGCCATAGCAATTCCTCTATGAGCAGGCACAGTGATTACAGGTCTCCGCTTCAAAACCAAAAGCTCCTTAGCCCACTTTCTACCACAGGGCACACCCACACCTCTTATCCCCATGCTAGTAATCATCGAAACTATTAGCTTATTTATTCAACCAGTAGCCCTAGCCGTACGCCTAACCGCCAATATTACAGCAGGACATCTACTTATACACCTAATCGGAAATGCCGCACTAGCATTATCAGTC---AATAATTTTCTTGCAACCCCTCTAATTCTAGCACTCCTAATAGCACTAACAATCCTAGAAATCGCAGTTGCCCTGATTCAGGCCTATGTCTTCACACTATTGGTAAGCCTCTACCTACATGATAATACT +>Dendrohyrax_dorsalis_NC_010301 +------------TAATGAACGAAAATCTATTTACCTCCTTCACTACTCCTT---CAACAATAGGACTCCCCCTAGAAATCCTAATCATCCTATTCCCAGCAATATTATACCCCACCCCAA---ACCGATTGGTCAATAATCGCCTAATCGCTACTCAACAATGATTAACCACCCTCATCATGAAACAACTGATAACAACCCATAACAACAAAGGACGTACATGAGCCTTAATACTAATATCACTCATCCTTTTTATTGCTTCCACCAATCTACTGGGACTTTTACCCCACTCATTCACACCAACCACTCAACTATCAATAAACCTGGGAATAGCCATCCCCCTATGAGCAGGAACAGTACTCCTAGGATTCCGACACAAAACCAAAGCCTCCTTGGCACACTTCCTGCCACAAGGCACACCCATCACATTAATCCCCATACTAGTAATCATTGAAACCATTAGCCTCTTCATTCAACCAATAGCCCTTGCAGTACGACTAACAGCCAACATCACAGCAGGACACTTACTAATTCATCTAATAGGAAGCACCACACTAACTCTCATGA---ACATTAGCCAAACAGCAACTGCAATCTCATTCATAGTCCTATTCCTGCTAACAATCCTAGAATTTGCAGTAGCACTGATTCAAGCCTACGTATTCACCCTTCTAGTTAGCCTATACCTCCACGACAACA +>Leopoldamys_edwardsi_NC_025670 +------------AATGAACGAAAATCTATTTGCCTCCTTCATCACTCCAAC---AATAATAGGTCTCCCAATCGTTGTGACCATTATTATATTCCCATCAATTCTATTCCCATCCTCTGA---ACGTCTAATCAGCAATCGTCTTCACTCATTCCAACACTGATTAATCAAACTAATTATTAAACAAATAATACTAATTCATACACCAAAAGGACGAACTTGAGCCCTAATAATTGTATCCTTAATTATATTTATTGGCTCTACAAACCTTCTAGGCCTTCTTCCTCATACATTCACCCCTACCACTCAACTATCTATAAACCTAAGCATGGCGATCCCATTATGAGCAGGAGCCGTAATTCTGGGATTCCGACATAAACTAAAAAACTCTTTAGCCCACTTCCTACCACAAGGAACACCCATCTCACTAATCCCTATACTAATTATCATCGAAACTATTAGCCTATTCATTCAACCAATAGCACTAGCAGTGCGACTAACAGCCAATATCACTGCAGGTCACCTATTAATGCACCTAATTGGAGGCGCTACCCTGGTACTCATAGA---CATCAGCCCACCAACAGCCACCATTACATTCATTATTCTCCTTCTACTTACAATGCTAGAATTCGCCGTAGCCCTAATCCAAGCCTACGTATTCACACTCCTAGTAAGCCTGTACTTACACGATAACAC +>Nannospalax_golani_isolate_623_NC_020757 +------------ATGAACGAAAATCTATTTGCCTCTTTCGCTACCCCTACA---CTAATAGGTCTCCCCATTGTAATTCCCATCATTATATTCCCAACCCTATTTTTTAAAACAACAAAC---AAATTAATTAACAACCGAGTAACAACAGCCCAACAATGATTAATTAAACTTATTACCAAACAAATAATATTTACACACTCACCAAAAGGCCGCACATGATCTCTAATACTCACCTCACTCATCATCTTTATTGGGTCTACAAACCTCCTAGGACTGCTTCCCCATACATTTACCCCAACCACACAACTCTCAATAAACTTAGGCATAGCAATCCCAATGTGGGCAGGAGCTGTAATCTTAGGCTTCCGTTACAAAACAAAAGCATCACTAGCCCACTTCCTACCCCAAGGTACCCCTATTACCCTAATCCCAATACTAGTTATCATTGAAACAATTAGCCTATTCATTCAACCTATAGCACTAGCTGTACGTCTAACAGCTAACATCACAGCGGGACACCTACTAATTCATCTAATCGGAGGTGCTACACTAGTATTAACCACA---ATTAACCTATCAACAGCCAGCATTACCTTCCTAATTCTAATAATACTTACTATCCTAGAACTTGCTGTAGCTATAATTCAAGCCTACGTATTCACCTTACTAGTTAGTCTATATTTACAAGACAACACA +>Spalax_carmeli_NC_020756 +------------TAATGAACGAAAATCTATTTGCCTCTTTCGCTACCCCTA---CACTAATAGGCCTCCCCATTGTAATCCCAATCATTATACTCCCAACACTATTTTTTAAAACAACAA---ACAAATTAATCAACAACCGAGTGACAACAGCCCAACAATGATTAATTAAACTAATCACCAAACAAATAATATTTACACACTCACCAAAAGGCCGCACATGATCCCTAATACTCACCTCACTCATCATCTTCATCGGATCCACAAACCTCCTAGGACTGCTTCCCCACACATTTACCCCAACCACACAACTCTCAATAAACTTAGGCATAGCAATCCCAATATGAGCCGGAACTGTGATCCTAGGCTTCCGTCATAAAACAAAAGCATCACTAGCCCACTTCCTACCCCAAGGTACCCCCATTATCCTGATCCCAATATTAGTTATAATTGAAACAATTAGCCTATTCATTCAACCTATAGCACTAGCCGTACGTCTAACAGCTAACATCACAGCAGGACACCTACTAATTCATCTAATTGGAGGCGCTACACTAGTATTAACCA---CAATCAACCTACCAACAGCCAGCATTACTTTCCTAATTCTTACAATACTTACTATCCTAGAACTCGCTGTAGCTATAATCCAAGCCTACGTATTTACCTTACTAGTTAGCCTATATCTACAAGACAACA +>Blastocerus_dichotomus_isolate_MRGBd8_NC_020682 +------------AATGAACGAAAACTTATTTGCCTCTTTCATTACCCCAAT---AATAATAGGTCTACCACTTGCTACTTTTATCGTTATTTTTCCTAGTCTACTGTTCCCAACATCAAA---TCGTCTAGTTAACAACCGTCTTATTTCTTTACAACAATGAGTACTTCAACTTGTATCAAAACAAATAATAGGAAATCATAGTACTAAAGGACAAACATGGACATTAATATTAATATCCCTAATTATATTTATCGGATCAACAAACCTATTAGGTCTTTTACCTCACTCATTTACACCAACCACACAACTGTCAATAAATTTAGGTATAGCCATCCCCCTATGAGCCGGAACTGTAATCACAGGCTTCCGAAATAAAACCAAAGCATCACTTGCCCATTTTCTCCCACAAGGAACACCTACACCATTAATTCCCATACTAGTTATTATTGAAACTATTAGCCTTTTCATTCAACCAATTGCCTTAGCCGTACGACTAACAGCTAACATTACCGCAGGACATTTACTAATTCACCTAATCGGAGGAGCTACACTTACATTAATAAC---TATCAGCACTACAACAGCTCTTATTACATTTATTATTCTAGTCCTACTAACAATTCTCGAATTCGCAGTAGCTATAATTCAAGCCTATGTATTTACCCTTCTAGTAAGTCTCTATTTGCATGATAACAC +>Monodon_monoceros_NC_005279 +------------ATGAACGAAAATCTATTTACCCCTTTCACAATCCCAATA---ATACTAGGCATTCCTATCACAACTCTAATTATTATATTTCCCACAATACTATTCCCAACACCAAAT---CAATTAATCAACAACCGCATGATCACTATCCAACAATGACTGACCAAACTCACATCAAAACAACTAATAAATACACACAACCCTAAAGGACAAACCTGATCCCTTATATTCATTTCACTTTTCTTATTTATTACTTCCACAAATCTTCTTGGAATACTACCCCACTCATTCACACCTACCGCTCAGCTCTCAATAAACTTAGGCATGGCTATCCCCCTATGAGCCGGCACTGTTGTTATAGGCTTTCGCAACAAGACAAAAATTTCCCTAGCCCATCTTCTACCACTAGGCACCCCCACCTTCTTAATCCCTATACTAGTAATAATTGAGACTATCAGTCTATTCATTCAACCTTTAGCCCTAGCAGTACGACTAACAGCCAACATCACAGCAGGTCACCTGTTACTACACCTAATTGGAAGTGCAACCCTTGCACTAGTAAAT---ATCAGTTTATTCACAGCCCTCATTACATTCACCATCCTTACTCTACTAACCATTCTCGAATTCGCTGTAGCCCTAATCCAAGCCTACGTATTCACCTTACTAGTAAGCCTATACCTGCAAGACAATACA +>Zalophus_californianus_NC_008416 +------------TAATGAACGAAAATCTATTCACCTCTTTCACTTCCCCTA---CAATAATAGGCCTTCCTATCGTAACCCTAATCATCCTATTTCCAAGCATATTATTCCCTTCACCAG---GCCGACTGATCAATAACCGCCTCACCTCAATTCAACAGTGACTGATCCAATTAACATCAAAGCAAATAATATTAATTCACAATCACAAAGGACAAACATGGACATTAATACTCATATCGCTCATCATATTCATTGGATCTACCAATCTACTAGGTCTACTACCACACTCATTTACTCCCACTACCCAACTATCTATAAATCTAGGAATGGCCATCCCCCTGTGAGCAGGAACAGTCGCCATAGGACTACGAACCAAAACTAAAGCATCCTTAGCCCACTTTCTACCCCAAGGAACACCCTTCCCCCTCATCCCAATATTAGTAATCATTGAATCTATTAGCTTGCTCATTCAACCTATAGCCTTAGCCGTACGACTAACAGCCAATATCACTGCAGGCCACCTATTAATTCACCTAATTGGTGGAGCCACCCTAGCCCTCATTA---ACATCAGCGCAATTACGGCCCTTATTACTTTCATTATCCTCACTCTACTTACAGTACTTGAGTTCGCTGTAGCCTTAATCCAAGCCTACGTCTTCACTTTACTAGTAAGCCTATACTTACATGATAACA +>Ursus_thibetanus_thibetanus_NC_011118 +------------AATGAACGAAAATCTATTCGCCTCTTTTTTTACCCCGAT---GATAATGGGGGTTCCCATTGTAGTCTTAATCGTTATGTTTCCGAGCATTTTATTCCCTTCTCCCAG---TCGACTGATCGACAATCGCTTAGTGTCTATTCAACAATGACTAGTCCGGCTAACATCAAAACAAATGCTATCCATTCATAATCGTAAAGGGCAAACCTGAGCACTAATGTTGATATCCCTAATCCTATTTATTGGCTCAACTAATCTTCTGGGTCTATTGCCACACTCATTCACACCTACCACGCAACTGTCAATGAATCTGGGAATGGCCATTCCCTTGTGAGCAGGTACAGTTGCCACTGGATTTCGATATAAGACCAAAGCATCCTTAGCTCACTTTCTACCTCAAGGAACACCTTTCCCTCTAATCCCTATACTTGTTATTATCGAAACAATCAGTCTATTCATCCAACCTATGGCCTTAGCCGTACGATTAACTGCTAATATTACTGCAGGTCACTTGCTCATCCATTTAATTGGAGGGGCTACTCTAGCTCTAACAAG---TATTAGCACTATTACAGCCCTCATCACCTTTATTATTCTAGTGCTACTTACTATTCTCGAGTTTGCTGTAGCCCTCATTCAGGCCTACGTCTTTACCCTGCTAGTAAGCCTATACTTACACGATAACAC +>Pan_troglodytes_NC_001643 +------------ATGAACGAAAATCTATTCGCTTCATTCGCTGCCCCCACA---ATCCTAGGCTTACCCGCCGCAGTACTAATCATTCTATTCCCCCCTCTACTGGTCCCCACTTCTAAA---CATCTCATCAACAACCGACTAATTACCACCCAACAATGACTAATTCAACTGACCTCAAAACAAATAATAACTATACACAGCACTAAAGGACGAACCTGATCTCTCATACTAGTATCCTTAATCATTTTTATTACCACAACCAATCTTCTTGGGCTTCTACCCCACTCATTCACACCAACCACCCAACTATCTATAAACCTAGCCATGGCTATCCCCCTATGAGCAGGCGCAGTAGTCATAGGCTTTCGCTTTAAGACTAAAAATGCCCTAGCCCACTTCTTACCGCAAGGCACACCTACACCCCTTATCCCCATACTAGTTATCATCGAAACTATTAGCCTACTCATTCAACCAATAGCCTTAGCCGTACGTCTAACCGCTAACATTACTGCAGGCCACCTACTCATGCACCTAATTGGAAGCGCCACACTAGCATTATCAACT---ATCAATCTACCCTATGCACTCATTATCTTCACAATTCTAATCCTACTGACTATTCTAGAGATCGCCGTCGCCTTAATCCAAGCCTACGTTTTTACACTTCTAGTGAGCCTCTACCTGCACGACAACACA +>Neovison_vison_voucher_ROM102488_NC_020641 +------------TAATGAACGAAAATCTATTTTCCTCATTCATTACCCCAA---CAATAATAGGACTCCCTATTGTAATTATTATCACTATGTTTCCAAGCATTATATTCCCATCACCTA---CCCGACTAATCAATAATCGACTCATCTCCATTCAACAATGATTAGTGCAACTAACATCAAAACAAATATTATCCATCCACAACCAAAAAGGACAAACTTGAGCCCTGATATTAATATCACTAATCTTATTTATCGGTTCTACTAATTTATTAGGCCTCCTGCCCCACTCATTCACCCCCACCACACAACTATCTTTAAATCTGGGTATAGCCATCCCCTTATGAGCAGGCACTGTAATCACTGGTTTTCGGCATAAAACAAAAGCCTCTTTAGCCCACTTTCTACCACAAGGAACACCACTACCTCTAATTCCCATACTTATTATTATCGAGACTATTAGCCTATTCATTCAACCCATAGCCCTGGCCGTACGACTAACAGCCAATATCACCGCAGGCCACCTATTAATTCACCTGATCGGAGGGGCTACTTTAGCCCTAATAA---ACATTAGCACAGTTACAGCAATAGTTACCTTCACTATCCTCGTCCTCCTAACTATCCTAGAATTCGCAGTAGCTCTTATCCAGGCCTATGTATTCACCTTACTAGTAAGCTTATACTTACACGACAATA +>Myrmecobius_fasciatus_NC_011949 +------------AATGAACGAAAATCTATTTGCCTCTTTCATCTGCCCTTC---TATCATAGGAGTATCGACACTACCAATTATTATTATATTCCCCTGTCTACTCCTAACCACCCCTAA---ACGCCTACTACCCAATCGAATCCAAACTCTTCAAATCTGACTTATCCGATTAATTACCAAACAAATAATAACTACACACAATAAACTTGGCCGAACATGATCACTCATACTAATCTCCCTAATCCTATTTATTGCTACAACCAACCTTCTTGGGCTTCTACCATATTCATTCACACCCACCACTCAACTATCTATAAATATTACCATGGCTATCCCACTTTGAATGGGTACAGTAGTAATAGGCTTTCGTAATAAACCAAAAGCATCGCTAGCTCACTTTTTACCACAGGGAACACCAACACCCCTAATCCCTATGCTAGTCATAATTGAAACTATTAGTCTATTTATTCAACCCTTAGCTCTAGCAGTACGACTCACAGCCAACATCACCGCAGGGCATCTACTTATTCACCTAATTGGATCAGCAGCTCTAGCACTACTATC---AATCAGCATCACACTATCATGCCTCACATTTGTCATCTTACTTCTTCTCACAATTTTAGAGCTAGCCGTAGCCATTATCCAGGCATACGTATTTACTCTCCTAGTTAGCCTATACCTGCAGGAAAATAC +>Naemorhedus_baileyi_isolate_104487_NC_020722 +------------ATGAACGAAAATTTATTTACCTCCTTCGTTACCCCTATA---ATACTAGGCCTCCCCCTTGCTACCTTTATTGTTCTATTTCCTAGCCTACTATTTCCCACATCAAAC---CGATTGATTAATAACCGCCTCATCTCCCTCCAACAATGACTACTTCAACTCATATCAAAACAAATGATAAGTATTCACAACATCAAAGGACAAACATGAACATTAATACTTATATCCCTAATTTTATTTATTGGGTCTACAAATTTATTAGGCCTATTACCCCACTCATTTACACCAACAACACAATTATCAATAAACCTAGGCATGGCTATTCCCCTATGAGCAGGGACCGTAATTACAGGCTTTCGCAACAAAACCAAAGCATCACTTGCCCATCTTCTACCACAAGGAACACCAACCCCACTAATCCCAATGCTAGTAATTATCGAAACCATCAGCCTCTTCATCCAACCAATAGCCCTTGCCGTACGATTAACAGCCAATATCACGGCAGGACATTTATTAATTCACTTAATTGGAGGAGCCACTTTTGCATTAATAAAA---ATCAGTACCACAGCAGCATTTATCACATTCATTGTCCTAGTCCTACTGACAATTCTAGAATTCGCAGTAGCTATAATTCAAGCCTACGTATTTACCCTTCTAGTTAGCTTATATCTGCATGATAACACA +>Cynopterus_brachyotis_NC_026465 +------------TAATGAACGAAAATTTATTCTCCTCTTTCATTACCCCAA---CACTAATAGGACTCCCCATTGTCACACTAATCATTATATTTCCAAGTATTCTATTCCCATCAACAA---ACCGTCTCATCAACAACCGCCTAATCGCAATTCAACAATGACTCCTTCACCTCACATCTAAACAAATAATGAACATTCACAACCCTACAGGACAAAAATGATCCCTAATGCTCATAACACTAATCCTGTTCATTGGCTCTACAAACCTGCTTGGTCTATTACCACATTCATTTACACCAACAACCCAACTCTCAATAAACCTTGGAATGGCTATCCCTCTATGAGCAGGTACAGTAGCCCTTGGATTTCGACACAAAACCAAAGCATCCCTTGCCCATTTCCTCCCCCAAGGCACACCCATCCCCCTTATCCCGATACTAATTATTATCGAGACTATTAGTCTCTTCATTCAACCAATAGCCCTGGCAGTTCGACTAACAGCAAATATCACCGCCGGACATCTCTTGATCCACCTAATTGGAGGCGCTACCCTAGCACTGCTAA---ACATCAGCACAACCACGGCCCTCATCACATTCATTATTTTAGTCCTCCTGACAATCCTTGAATTCGCAGTTGCCTTAATTCAAGCATACGTGTTTACTCTACTAGTAAGCCTGTACCTACATGATAACA +>Homo_sapiens_neanderthalensis_NC_011137 +------------AATGAACGAAAATCTGTTCGCTTCATTCATTGCCCCCAC---AATCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATTGATCCCCACCTCCAA---ATATCTCATCAACAACCGACTAATTACCACCCAACAATGACTAATCAAACTAACCTCAAAACAAATGATAGCCATACACAACACTAAGGGACGAACCTGATCTCTTATACTAGTATCCTTAATCATTTTTATTACCACAACTAACCTCCTCGGACTCCTGCCTCACTCATTTACACCAACCACCCAACTATCTATAAACCTAGCCATGGCCATCCCCTTATGAGCGGGCGCAGTGATTATAGGCTTTCGCTCTAAGATTAAAAATGCCCTAGCCCACTTCTTACCACAAGGCACACCTACACCCCTTATCCCTATACTAGTTATTATCGAAACCATCAGCCTACTCATTCAACCAGTAGCCCTGGCCGTACGCCTAACCGCTAACATTACTGCAGGTCACCTACTCATGCACCTAATTGGAAACGCCACCCTAGCAATATCAAC---CATTAACCTTCCCTCTACACTTATCATCTTCACAATTCTAATTCTACTGACTATCCTAGAAATCGCTGTCGCCTTAATCCAAGCCTACGTTTTCACACTTCTAGTAAGCCTCTACCTGCACGACAACAC +>Tragelaphus_angasii_isolate_MBP15_NC_020748 +------------ATGAACGAAAACCTATTTGCCTCTTTCATTACCCCAATA---ATTCTAGGCCTCCCCCTTGCAACCCTTATTGTTCTATTCCCTAGCCTATTATTTCCAACACCCAAC---CGACTAGTAAATAACCGCCTCATCTCCCTTCAACAATGAGCGCTCCAACTCGGATCAAAACAAATAATAGCTATCCACAACACCAAGGGACAAACATGGACACTAATACTAATGTCCCTAATCCTATTTATTGGATCAACAAACCTACTGGGTCTCCTGCCCCACTCATTCACACCAACCACACAACTGTCAATAAACCTAGGCATGGCTATCCCACTGTGAGCAGGAGCGGTTATCACAGGATTTCGTAACAAGACAAAAGCATCACTCGCACACTTCTTACCACAAGGAACACCAACCCCACTAATCCCAATGCTAGTCATTATTGAAACCATCAGCCTCTTTATTCAACCAGTAGCCCTAGCCGTACGACTAACAGCTAACATCACTGCAGGCCACCTACTAATTCACCTAATTGGAGGAGCTACACTTACATTGATGAAC---ATTAGCACCACAACAGCTCTCATCACATTTATTATTTTAGTTCTATTAACAATCTTAGAATTTGCAGTAGCTATGATCCAAGCCTACGTATTTACCCTCTTAGTTAGCCTATACTTACATGACAACACA +>Cephalophus_jentinki_isolate_SUN_NC_020688 +------------TAATGAACGAAAATCTGTTTGCCTCTTTCATTACCCCTA---TAATACTAGGCCTACCCCTCGTCACCCTCATTGTTTTATTTCCCAGTTTATTATTTCCAACATCAA---ATCGACTAGTTAACAATCGCCTCATCTCCCTCCAACAATGACTACTCCAACTCATCTCAAAACAAATAATAAGCATTCATAATCCTAAAGGACAAACATGAACACTAATACTAATATCCTTAATTCTATTTATCGGATCAACAAATCTATTAGGTCTATTACCCCACTCATTTACACCAACTACACAACTGTCAATAAATTTAGGTATAGCCATTCCTCTGTGAGCAGGAGCTGTCATCACAGGCTTCCGCAATAAAACTAAAGCATCACTCGCCCACTTCCTACCACAAGGAACACCAACCCCATTAATTCCAATACTAGTAATTATTGAAACTATTAGCCTCTTTATTCAACCAATAGCCCTCGCCGTACGACTAACAGCCAACATCACAGCAGGACATCTGCTAATTCACTTAATCGGAGGAGCTACACTTGCACTAATAA---GTATTAATACCACAACAGCCCTCGTTACATTTATCATCTTAATCCTACTAACAATTCTTGAATTCGCAGTAGCCATGATTCAAGCCTATGTATTTACTCTCCTAGTCAGCCTGTACCTGCACGACAACA +>Mus_fragilicauda_isolate_R5125_NC_025287 +------------AATGAACGAAAATCTATTTGCCTCATTCATTACCCCAAC---AATAATAGGCCTGCCAATCGTCGTAGCCATCATTATATTCCCATCTATTCTCTTCCCATCCTCAAA---ACGCTTAATTAACAATCGACTCCACTCCTTCCAACACTGATTAATTAAACTAATTATTAAACAAATAATATTAATCCACACCCCAAAAGGACGAACATGAGCCCTAATAATCGTTTCTCTCATCATATTTATTGGGTCTACAAACCTCCTGGGACTTCTACCCCACACATTTACACCTACGACTCAACTGTCCATAAATTTAAGTATGGCTATTCCATTATGAGCTGGAGCCGTAATTACAGGCTTCCGATATAAACTAAAAAGTTCCCTCGCCCACTTTCTTCCACAAGGAACCCCAATTTCACTAATTCCAATACTAATTATCATTGAAACAATTAGCTTATTCATTCAACCTATAGCATTAGCAGTCCGACTAACAGCTAACATTACTGCAGGCCACTTACTAATGCACCTAATTGGAGGAGCTACTCTAGTACTAATAAA---TATTAGCCCACCAACAGCCACCATTACATTTATTATCTTACTTCTACTTACAGTACTTGAATTTGCAGTAGCATTAATCCAAGCCTACGTATTTACCCTCCTAGTAAGCCTATATCTACATGACAATAC +>Notoryctes_typhlops_NC_006522 +------------ATGAACGAAAATTTATTTGCCCCCTTCATCACCCCTTCA---ATCATAGGTATTACGACACTACCAATTATTATTATATTCCCATGTTTAATCCTATCAACCCCAAAA---CGATGAATTCCAAACCGCATCCAAACATTGCAAATATGACTAATCCGCCTTATCACAAAACAAATGATAACCATACATAACAAACTAGGTCGAACATGAACCCTAATACTTATATCATTAATCCTATTTATCGCCTCCACTAACCTACTCGGCCTTCTACCATACTCATTTACACCTACAACTCAACTATCAATAAACATCGGTATAGCAATTCCACTATGAATGGGTACCGTCCTAATAGGTTTCCGTAATAAACCTAAAGCTTCTCTAGCCCATTTTCTACCTCAAGGAACACCCACTCCCCTCATCCCTATACTAATCATTATCGAAACCATTAGTCTATTTATCCAGCCGCTAGCACTAGCAGTACGACTAACAGCCAACATTACAGCCGGACATCTACTAATTCATCTTATTGGCTCAGCAACCCTAGCCCTATCCTCC---ATCAGCATGACAGTGTCATCCATTACATTCATAATTTTATTCCTCCTCACAATCCTAGAATTTGCTGTAGCAATGATTCAAGCCTATGTATTTACACTACTAGTAAGCCTATACTTACATGATAACTCC +>Philantomba_monticola_isolate_E11_14_NC_020736 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTA---TAATTCTAGGCCTTCCCCTTGTTACTCTTATTGTCCTATTCCCTAGTTTGCTATTTCCAACATCAA---GCCGACTAGTAAACAACCGCCTCATTTCTCTCCAACAATGACTACTCCAACTTATCTCAAAACAAATGATAAGCATTCATAATCCTAAAGGACAAACATGAGCACTAATATTAATGTCTCTAATCCTATTTATTGGGTCAACAAACCTACTAGGCCTACTACCCCACTCATTTACACCAACCACTCAACTATCAATAAACTTAGGCATAGCCATCCCTCTATGAGCAGGAGCCGTCATCACAGGCTTTCGTAACAAAACCAAAGCATCACTTGCCCATTTCCTACCACAAGGGACACCAACCCTATTAATCCCAATACTAGTAATTATCGAAACTATTAGCCTTTTTATTCAACCAGTAGCTCTCGCTGTACGGCTAACAGCCAATATTACAGCAGGACACCTATTAATCCACTTAATCGGAGGGGCCACACTCGCACTAATAA---GTATTAGCACCACAACAGCCCTCATTACATTTATTATTCTAGTTCTACTAACAATTCTTGAGTTCGCAGTAGCCATAATCCAAGCCTACGTATTCACTCTCCTAGTAAGCCTATACCTGCACGACAATA +>Cephalophus_natalensis_isolate_SUN_NC_020690 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTAT---AATACTAGGCCTACCCCTCGTTACTCTTATTGTCCTATTTCCCAGCCTACTATTCCCAACATCAAA---TCGATTAATTAACAATCGCCTCATTTCCCTTCAACAATGACTGCTCCAACTCATCTCAAAACAAATAATAAGTATCCATAACCCTAAGGGACAGACATGAGCACTAATACTAATATCCCTAATTTTATTTATTGGCTCAACAAACCTACTAGGGCTACTACCCCACTCATTCACACCAACCACACAACTATCAATAAATCTAGGTATGGCCATTCCTCTATGAGCTGGAGCTGTTGTCACAGGCTTCCGTAATAAAACTAAAGCATCACTCGCCCATTTTCTGCCACAAGGTACACCAACCCCATTAATCCCAATACTAGTGATTATTGAAACTATTAGCCTCTTCATCCAACCAGTAGCCCTTGCTGTTCGACTGACAGCCAATATCACAGCAGGACACCTATTAATCCACCTAATCGGAGGAGCCACACTTGCGCTAATAAG---CATTAGCACCACAACAGCTCTTATTACATTTATTATTCTAGTCCTACTAACAGTTCTCGAATTCGCAGTAGCCTTAATCCAAGCTTATGTATTCACCCTCCTAGTCAGCCTATATCTGCACGACAACAC +>Rattus_fuscipes_NC_014867 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAACA---GTAATAGGTCTACCAATTGTCGTTACCATCATTATATTCCCATCAATTCTTTTCCCATCATCAGAG---CGCCTTATTAGCAATCGCCTACACTCATTTCAACACTGACTAATTAAACTCATCATCAAACAAATAATATTAATCCATTCACCAAAAGGACGAACCTGAGCACTAATGATCGTATCACTAATTATATTTATTGGCTCAACTAACCTCTTAGGCCTGCTTCCCCATACATTCACCCCCACCACACAGCTATCCATAAACCTAAGCATGGCCATCCCTCTATGAGCAGGGGCTGTAATTTTAGGATTCCGACACAAACTAAAAAATTCTTTAGCCCATTTCCTACCACAAGGAACACCCATCTCACTCATTCCCATACTAATTATCATCGAAACTATCAGCTTATTCATCCAACCAATAGCACTAGCAGTACGACTAACAGCAAATATCACAGCAGGCCATCTATTAATACACCTAATTGGAGGGGCTACTCTAGTACTCATGAAC---ATCAGCCCACCAACCGCCACAATCACATTCATCATCCTTCTTTTACTTACAGTACTTGAATTCGCCGTAGCCTTAATTCAAGCCTACGTATTTACTCTCCTAGTAAGCCTGTACCTACATGACAATACA +>Wiedomys_cerradensis_NC_025747 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAA---CAATAATAGGCCTACCTATCGTAGTACTAATTATTATGTTTCCATCTATATTTATACTAACATCCA---AACGAGTATTAACCAACCGCCTGGTTGCCTTACAATTATGACTAACTAAATTAACTCTAAAACAAATAATAATAACTCACTCCATAAAAGCCCGAACATGGTCCCTTATACTGATTTCCCTTATTATATTTATTGGCTCCACCAACCTCTTAGGCCTTCTCCCCCACACATTTACACCAACCACCCAACTGTCAATGAATTTAAGCATAGCAATTCCTTTATGGGCCGGAACAGTAATCTTAGGTTTTCGTCACAAAACAAAAGCTTCTCTAGCCCACTTTTTACCTCAAGGAACCCCAATTGCTCTAATCCCTATATTAATTATCATTGAAACAATTAGTTTATTTATCCAGCCCATAGCTTTAGCTGTACGGCTTACAGCCAATATTACTGCCGGACATCTCTTAATTCACCTAATTGGAGGCGCCACGCTAGCCCTCACCT---CAATCAGTATAACTGTTGCCTCCATCTCCTTCATCATTCTTATTCTCCTTACAATTCTAGAAATTGCGGTTGCCCTAATCCAAGCCTATGTATTTACACTTCTTGTTAGCCTATATTTACATGATAATA +>Eschrichtius_robustus_NC_005270 +------------AATGAACGAAAATTTATTTGCCCCTTTCATAACTCCAGT---GATACTAGGCATCCCTATTACCACTCTAATCATTATTCTCCCATCTATCTTATTTCCTACACCAAA---TCGACTAGTCAACAACCGTACAATCTCCATCCAACAGTGATTGACCAAACTCACATCAAAACAACTAATAAACGTACACAACCCTAAAGGGCAAACTTGATCTCTAATACTTACCTCACTCTTCCTATTTATTGCCTCCACTAACCTCCTTGGAATATTACCTCACTCATTCACACCTACCACACAACTCTCAATAAACGTAGGAATGGCTATCCCCCTATGAGCCGGTACCGTCGCCACAGGCTTACGCAATAAAACAAAAATGTCCTTAGCCCATTTATTACCACAAGGCACACCCACTTTTCTTATTCCTATACTAGTAATTATTGAAACCATCAGCCTATTCATTCAACCAATAGCACTAGCCGTACGACTAACTGCCAACATCACAGCAGGTCACCTACTAATACATCTAATCGGAGAAACAACCCTCGTACTAACAAG---TATCAGCCCATTTACAGCCCTTATCACTTTCATTATCCTAACCCTATTAACTATTCTTGAATTTGCTGTCGCCCTAATTCAAGCTTATGTCTTTACCCTCCTAGTAAGCCTATACCTTCATGATAACAC +>Trichechus_manatus_NC_010302 +------------ATGAACGAAAACTTATTTGCCTCTTTCATTACCCCTACA---ATAATGGGTCTACCCATTGTTATTCTTATCATTGCACTCCCAGCAATATTATACCCTTCCCCAAAT---CGACTTGTCGACAATCGCTTAATCTCTATTCAACAATGACTGGTTCAACTCATTCTCAAACAAATACTACTAATCCATAACGTTAAAGGCCGTACATGATCTCTTATACTAATCTCATTAATCCTGTTCATTGGCTCAACCAATCTTTTAGGCCTAATCCCATATTCATTTACACCCACCACTCAACTATCCATAAATCTGGGCATGGCTATCCCCCTATGAGCCGGAACAGTAATTACAGGATTCCGATATAAGACCAAGTCCTCATTGGCCCACTTCCTCCCGCAGGGCACACCCACTTTGCTGATTCCAATACTAGTGGTAATCGAGACCATCAGTCTGTTTATTCAGCCAATAGCCCTAGCTGTACGCCTTACCGCCAACATCACAGCTGGCCACCTACTTATGCGTCTAATCGGGGGAGCCACCCTGGCCTTGACGGCT---ATCAGCCCTGCAACTGCTTCAATCACCTTCATCGTCCTTCTATTACTCACAATCTTAGAATTTGCAGTGGCATTAATTCAAGCATATGTATTCACATTGCTAGTTAGCCTGTACCTACATGACAACACC +>Oreotragus_oreotragus_isolate_PhC21_NC_020731 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTGTA---ATTTTTGGTCTTCCTCTAGCAACACTCATCGTCCTATTTCCTAGCTTATTATTCCCAACATCAAAC---CGACTGACAAATAACCGTCTTATTTCCCTTCAACAATGAGCACTCCAACTTATATCAAAACAAATGATAAGCATCCATAACCCCAAAGGACAAACATGAGCATTGATATTAATGTCCCTAATTCTATTCATTGGATCAACCAACCTATTAGGTCTCCTACCCCACTCATTTACACCAACCACACAACTATCAATAAACTTAGGCATGGCTATTCCCCTATGAGCAGGAGCCGTAATCACAGGCTTCCGCAATAAAACTAAAGCATCGCTTGCCCATTTCCTACCACAAGGAACCCCAACCCCACTGATCCCAATACTAGTAATTATCGAAACTATCAGCCTTTTTATTCAACCAATTGCCCTTGCTGTACGATTAACAGCTAATATTACAGCAGGCCACTTACTAATTCACCTAATCGGAGGAGCCACACTCGCATTAATAAGT---ATCAGCACTACAACAGCTCTCATTACATTTATTATTCTCATTCTACTGACAATTCTTGAATTCGCAGTAGCTATAATTCAAGCTTACGTATTTACCCTTCTAGTCAGCCTATACCTGCACGACAATACA +>Grampus_griseus_NC_012062 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATAATCCCAA---TTATACTAGGTATTCCTATTACTACTCTAATTATTATATTTCCCACCATACTATTCCCAACACCAA---ATCGATTAATCAATAACCGTGTAATTGCTATTCAACAATGACTTACCAAACTTACATCAAAACAACTGATAATTACACATAGCCCCAAAGGACAAACCTGATCTCTAATACTCATCTCACTCTTCCTCTTCATCGCTTCCACAAACCTTCTTGGAATATTACCTCACTCATTCACACCTACTACTCAACTCTCCATAAACTTAGGCATAGCTATTCCATTATGAGCTGGTACCGTCTTTATAGGTTTCCGTAATAAGACAAAAATATCTCTAGCCCACCTTTTACCGTTAGGCACACCCACTTTCCTAATTCCTATGCTGGTAATAATCGAAACTATCAGCCTATTTATTCAACCCTTAGCTCTGGCAGTACGACTAACAGCGAACATCACAGCAGGTCACCTATTACTACATCTAATTGGAAGCGCAACTCTTGCATTAATAA---GCATTAACCTATTCACAGCTCTCATCACATTTATCATCCTCACTTTATTGGTCATCCTCGAATTCGCTGTAGCCCTAATCCAAGCCTACGTATTCACCCTACTAGTAAGCCTATACTTGCAAGACAATA +>Capreolus_capreolus_isolate_CYTO_NC_020684 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTGTCCCAAT---AGTTTTAGGCCTCCCACTTGCCACTCTTATCATTATTTTTCCTAGCCTATTATTTCCTGCATCCAA---TCGTCTAATCAGTAACCGTCTTATTTCCCTTCAACAATGAGTACTTCAACTTGTATCAAAACAAATAATAGGAATTCACAATACCAAGGGACAAACATGGGCACTAATACTTATATCCCTAATTTTATTTATTGGATCAACAAATCTCCTGGGCCTATTACCCCACTCATTTACACCAACTACACAACTATCCATAAACTTAGGCATAGCTATTCCTTTATGAGCAGGCACTGTAATTATAGGCTTTCGCAATAAAACTAAAGCATCACTCGCCCATTTTCTTCCACAAGGAACACCTACCCCATTGATCCCAATACTAATTATTATTGAGACTATTAGCCTATTCATTCAACCAATTGCCCTAGCCGTACGATTAACAGCCAATATTACCGCAGGGCACTTGTTAATTCACCTAATCGGAGGAGCCACACTTGCACTAATAAG---TATTAGCACTACAATAGCATTTATTACATTTATTATTTTAGTCTTATTAACAGTCCTTGAATTCGCAGTAGCTATGATTCAGGCTTACGTATTTACTCTTTTAGTTAGCCTTTACCTGCACGATAACAC +>Bos_primigenius_NC_013996 +------------ATGAACGAAAATTTATTTACCTCTTTTATTACCCCTGTA---ATTTTAGGTCTCCCTCTCGTAACCCTTATTGTACTATTCCCCAGCCTACTATTCCCAACATCAAAC---CGACTAGTAAGCAATCGCTTTGTAACCCTCCAACAATGAATACTTCAACTTGTATCAAAACAAATAATGAGTATCCACAATTCTAAAGGACAAACATGAACATTAATATTAATATCTCTGATCCTATTTATTGGATCAACAAACCTACTAGGCCTATTACCCCATTCATTCACACCAACAACACAACTATCAATAAACCTAGGCATAGCCATCCCCCTGTGAGCAGGAGCCGTAATTACAGGATTCCGCAATAAAACTAAAGCATCACTTGCCCATTTCTTACCACAAGGAACACCCACTCCACTAATCCCAATACTAGTAATTATTGAAACTATCAGCCTTTTTATTCAACCTATAGCCCTCGCCGTGCGGTTAACAGCTAACATCACTGCAGGACACCTATTAATTCACCTAATCGGAGGAGCTACACTTGCACTAATAAGC---ATTAGCACTACAACAGCTCTAATTACATTCACCATTCTAATCCTACTAACAATTCTAGAGTTTGCAGTAGCTATAATCCAAGCCTATGTATTCACTCTCCTAGTCAGCCTATATCTGCATGACAACACA +>Alces_alces_isolate_Kazakhstan_NC_020677 +------------TAATGAACGAAAATTTATTTGCCTCTTTCATTACCCCAA---TAATTATAGGCCTTCCGCTCGCTACTCTTATCGTTATATTTCCTAGCCTCCTATTTCCAACATCAA---ATCGCCTAGTAAATAACCGCCTCATTTCCCTCCAACAATGAATACTTCAACTTGTATCAAAACAAATAATAGGAATTCACAATACCAAAGGACAAACATGAACATTAATACTTATATCCCTAATTCTATTTATTGGATCCACAAATCTCCTAGGCCTATTACCCCACTCATTTACACCAACTACACAACTATCCATAAATCTAGGCATAGCTATTCCTTTATGAGCAGGAGCTGTAATTACGGGTTTCCGTAATAAAACCAAAGCATCACTTGCCCATTTCCTTCCACAAGGAACACCTACTCTTTTAATCCCTATGCTAGTTATCATTGAAACTATTAGCCTTTTCATCCAACCAATCGCCTTAGCTGTACGATTAACAGCTAATATTACTGCAGGACACCTGCTAATTCACCTAATTGGAGGAGCCACCCTAGCACTGATAA---GTATTAGCAACACAATAGCCCTCATTACATTTATTATTTTAGTACTACTCACAATTCTCGAATTTGCAGTAGCCATAATTCAAGCCTACGTATTTACTCTTCTAGTCAGCCTTTATCTGCATGACAACA +>Bison_bonasus_NC_014044 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTACCCCTAT---AATTTTAGGTCTCCCCCTCGTAACCCTTATTGTACTATTCCCCAGCCTACTATTCCCAACATCAAA---TCGACTAGTAAGTAATCGCTTTGTGACTCTCCAACAATGAATTCTCCAACTTGTATCAAAACAAATAATGAGCATTCACAATTCCAAAGGACAAACATGAACATTAATACTAATATCCCTAATCCTATTTATCGGATCAACAAACCTACTAGGCCTATTGCCTCATTCATTCACACCAACAACACAACTATCAATAAACCTAGGCATAGCCATTCCCCTATGAGCAGGAGCCGTAATCACAGGATTCCGCAATAAAACTAAAGCATCACTTGCCCATTTCTTACCCCAAGGAACACCCACTCCTCTAATCCCAATACTAGTAATTATTGAAACTATCAGCCTTTTTATCCAACCTATAGCCCTCGCCGTGCGGTTGACAGCTAACATCACTGCAGGACACCTATTAATTCACTTAATTGGGGGAGCTACACTTGCACTAATAAG---TATTAGCACTACAACAGCTCTAATTACATTCATCATTCTAATCCTACTAACAATTCTAGAGTTTGCAGTAGCTATAATCCAAGCCTATGTATTCACTCTCCTAGTCAGCCTATATCTGCATGACAACAC +>Cricetulus_kamensis_NC_024592 +------------ATGAACGAAAATCTATTTGCCTCTTTCATCACCCCTACA---CTAATAGGACTGCCAATCGTAATTGCCATCATTATATTCCCAACAATAATATTCACATCCTCCAAA---CGCTTAGTAAACAACCGATTCATTACTTTACAACAATGACTAACTAAATTAGTCACCAAACAAATAATAATAATTCACTCACCTAAAGGACGAACCTGGTCCCTAATACTAGTTTCTCTAATTATATTCATTGGGTCTACCAATCTCCTAGGCCTCCTACCCCATACGTTTACTCCAACCACCCAACTATCCATAAACCTAGGAATAGCTATCCCACTGTGAGCAGGAGCCGTATTAATAGGCTTCCGCCACAAAATAAAAGACTCTCTAGCCCACTTCCTCCCCCAAGGTACCCCAATTCCCCTAATTCCAATACTTATCATCATCGAAACTATTAGCCTATTCATTCAACCCATAGCCCTAGCAGTCCGACTAACAGCCAACATCACCGCAGGCCACCTACTAATACACCTTATTGGAGGGGCTACTCTAGTCCTAACAACC---ATCAGCCCACCAACCGCCATAATCACATTTATCATCTTAGTCCTCCTCACAATATTAGAGTTTGCTGTGGCCCTGATCCAAGCCTACGTGTTTACCCTTCTTGTCAGCCTCTATCTACATGATAACACA +>Mammut_americanum_NC_009574 +------------TAGTGAACGAAGGACTATCCACCTTCTTCGATGTACCCA---------------TAGGCACTATAACTCTAATTGTTGCATTCCCAGCGATTTTACTTCCAACTACAA---ATCGCCTAATTACTAACCGTTTAGTCACAATCCAACAATGGCTAATTCAACTAATCATAAAGCAACTCTTGACTATTCATAACACAAAAGGACTGTCATGATCTCTCATACTAATTACTCTAACCTTATTTATTGGTCTGACTAACCTACTAGGTCTACTACCTTACTCATTCACCCCTACAACACAACTAGCCATAAACTTAAGCATAGCAATTCCACTATGGACTGGTACAGTAATCCTAGGCTTACGACATAAAACTAAAGTCTCATTAGCCCATCTCCTTCCACAAGGAACACCTACATTTCTTATTCCCATAATTATTGTCATCGAAACTATTAGTCTACTCATTCGACCTATTACCCTAGCGGTTCGACTCACCGCCAACATCACAGCAGGTCACTTACTTATTCATCTAACTGGGACCGCTACGCTGACTTTACTAT---CAATCCACCCAATAACAATTACAGTAACATTTATTACAATAATCCTACTTACAATCCTAGAACTTGCCGTAGCGCTAATCCAGGCTTATGTATTCGCTCTTCTGGTTAGCCTATATCTATATGAGAATG +>Ailurus_fulgens_NC_011124 +------------AATGAACGAAAACTTATTTGCCTCTTTCACTACCCCAAC---ATTAATAGGACTCCCTATTGTGATTCTCATTATTATACTCCCGAGCATTCTTTTTCCATCATCCAA---CCGATTAACCAATAACCGACTTATTTCAATCCAACAGTGACTATTAAAGCTTACATCAAAACAAATACTATCCACTCACAACTACGAAGGACAAAGCTGAGCCCTAATACTAATATCTTTAATTCTATTCATTGGCTCAACCAACCTACTAGGCCTTCTACCTCATTCATTCACTCCAACTACACAACTATCTATAAACCTAGGTATAGCTATTCCTCTATGAGCAGGAACAGTAGTTACAGGATTCCGATATAAAACTAAAGCATCTCTAGCTCATTTCCTACCCCAAGGAACACCTATTTTCTTAATTCCTATACTTGTAATCATTGAAACTATCAGCCTATTCATTCAACCTATGGCCCTAGCTGTACGACTAACAGCCAACATTACTGCAGGCCACCTGTTAATCCACCTGATCGGAGGGGCTACCCTCGTCCTAATAAA---TATTAGTACTGTTACAGCCTTAATTACCTTTATTATTCTAGTTTTACTGACTATTTTAGAATTTGCAGTAGCCCTCATTCAAGCCTACGTATTTACTCTCTTAGTAAGCCTATATCTACATGACAATAC +>Trachypithecus_francoisi_NC_023970 +------------ATGAACGAAAATTTATTTACTCCATTTACAACCCCAACT---CTCCTAACTCTACCCGCTGTAGTACCCATTATTCTATTTCCCACATTACTATTTCCAACCTCCAAG---CACCTTGTTAACAATCGACTAATTACTATTCAACAAAATCTGATTCAACTTATCTTAAAACAAATAATAATAATTCATAATACAAAAGGACGAACCTGGTCTCTAATGCTAATATCTCTAATTATTTTTATTGCCACAACCAACCTCCTCTGACTACTACCTCACTCATTTACACCTACCGCCCAGCTGTCTATGAATTTGGCAATGGCAATCCCTCTATGGGCTGGTACAGTGATTACAGGCCTCCGCTTTAAAACCAAAAATTCCCTAGCCCATTTTCTACCACAAGGCACACCCACATTTCTTATCCCCATACTAGTAATTATTGAAACTATCAGCTTATTTATTCAACCAGTGGCCCTAGCTGTACGTCTAACCGCCAATATCACAGCAGGACATCTACTCATGCATCTAATCGGAAGTGCCGTATTAGCATTATTAACC---ATTAATTTTTTTGCAACTTCACTAACCTTCGTACTCCTCTTGCTATTAACAATCCTAGAAATTGCAGTAGCCCTAATCCAAGCCTATGTTTTCACGCTCTTAGTAAGCCTTTATTTACATGATAATACT +>Pudu_mephistophiles_isolate_MRGPm2_NC_020739 +------------TAATGAACGAAAATTTATTTGCCTCTTTCATTACTCCAA---TAATTTTAGGCCTTCCACTTGCTACTCTAATCATTATTTTTCCTAGCCTGTTATTCCCAACATCAA---ATCGTCTAGTAAACAACCGTCTTATTTCTCTCCAACAATGAATAATTCAACTTGTATCAAAACAAATAATAGGAATTCACAACGTCAAAGGACAAACATGAACATTAATATTAATATCCTTAATTATATTTATTGGATCAACCAACCTTCTAGGTCTATTACCTCACACATTTACACCAACCACACAGCTGTCAATAAACTTAGGTATAGCCATTCCTCTATGAGCAGGAACCGTAATTATAGGTTTCCGTAATAAAACCAAAGCATCACTTGCCCATTTTCTTCCACAAGGAACACCCACTCCATTAATCCCCATACTAGTTATTATCGAAACTATTAGCCTTTTTATTCAACCAGTTGCCTTAGCTGTACGATTAACAGCTAATATCACTGCAGGACATCTACTAATTCACCTAATTGGAGGGGCCACACTTGCACTAATAA---ATATTAGCACTACAATAGCCCTTACTACATTTATTATTCTAGTTCTACTCACAGTTCTCGAGTTCGCAGTAGCCATAATTCAAGCTTACGTATTTACCCTTTTAGTAAGCCTCTACTTACATGACAACA +>Phocoena_phocoena_NC_005280 +------------AATGAACGAAAATCTATTTGCCCCTTTCATAGTCCCAGT---AATACTGGGCATCCCCATCACCACCCTAATTATCATATTTCCCACCCTATTATTCCCAACACCAAA---CCGACTAATCAGTAATCGAACAGTCGCTATCCAACAATGATTGACTAAACTCACATCAAAGCAGCTAATAATTACACACAACCCCAAAGGACAAACCTGATCTCTCATGCTTATTTCACTTTTCTTGTTCATTGCCTCTACAAATCTTCTTGGAATAATACCCCACTCATTTACACCTACCACCCAACTCTCAATAAATCTAGGCATGGCTATCCCTTTATGAGCTGGCGCCGTTGTTATAGGCTTTCGCAATAAAACAAAAATATCCTTGGCCCACCTCTTACCACTAGGTACCCCTACCTTTCTAATCCCTATGTTAGTTATAATTGAAACTATTAGCCTATTTATTCAACCCTTGGCCTTAGCAGTGCGATTAACAGCCAACATCACAGCAGGCCACCTATTATTACACCTAATTGGAAGTGCAACCCTTGTACTAACAAG---CATCAGCCCACCCATAGCCCTCATTACATTCACCATCCTTACCTTGCTAGTCATCCTTGAATTCGCCGTGGCCTTAATCCAAGCTTATGTATTTACCCTACTAGTGAGCTTGTACTTGCAAGACAATAC +>Rhinolophus_monoceros_NC_005433 +------------ATGAACGAAAATCTATTCGCCTCTTTCATTACCCCAACG---ATAATGGGCCTTCCCATTGTTATCTTAATTATTATATTCCCCACAATTCTCTTTCCCTCAACAAAT---CGACTAATTAGTAACCGCCTAGTCGCCATCCAACAATGATTAATTCATATAACATCAAAACAAATAATAGCCATCCACAACCCTAAAGGCCAAACCTGGACACTAATGCTCATGTCTCTTATCCTATTTATTGGCTCAACAAACCTTCTAGGACTTCTTCCCCATTCCTTCACACCGACTACACAACTATCTATAAACCTGGGTATGGCTATCCCTCTATGAGCAGGAACTGTCATTCTAGGCTTCCGCCACAAGACAAAAGCTTCCCTAGCCCATTTCCTGCCACAAGGAACCCCTCTCCCCCTAATCCCTATACTAGTAATCATTGAAACTATCAGTCTATTTATTCAACCCCTAGCCCTAGCCATACGGCTAACAGCCAACATTGCCGCCGGACATCTCTTAATCCACCTAATTGGCGGCGCCACACTAGCTCTACTAAGC---ATCAGTACGGCACCACCTTCAATTACATTTATCATTCTTGTACTACTGACAATCTTAGAGTTCGCCGTCGCCCTAATCCAGGCCTATGTATTCACACTACTGGTTAGCCTCTACCTACATGACAACACC +>Macaca_assamensis_NC_023795 +------------TAATGAACGAAAATCTGTTTACCTCTTTCTCAACCCCAA---CAATCCTAAATCAACCCGCCACAATTCCCATCATCCCATTCCCCACCCTACTAATCTTAACCTCCA---AACATCCCCGTTATAATCGACTAGCCACCATTCAACAAAACCTGACCCAACTCGCCCTAAAACAAATAATAGCAACTCACAACGCTACAGGACAAACTTGATCCTTGATACTAATATCTCTAGTCACCTTTATTGCCATAACAAACCCCCTAGGACTTCTGCCTTACTCGTTCACGCCAACCACCCAACTTTCCATAAACCTAGCCATAGCAATCCCTCTATGGGCGGGCACAGTGATACTAGGATTTCGCTTTAAAGCCAAAAATTCCCTAGCCCATCTCCTACCACAAGGTACACCCACACCCCTCATCCCCATATTAGTAGTAATCGAAACTATAAGCCTACTTATTCAACCAATAGCCCTGGCCGTACGACTAACCGCAAACATCACAGCCGGCCATCTACTGATACACCTGGTTGGAAATGCCGCACTAGCACTATCAA---CCACCAACTTCTCCATGACCCTGCTAACTTCTATACTTCTAGTATTACTAACTGCTCTAGAAATCGCAGTAGCCCTAATCCAAGCCTATGTCTTCACACTCTTAATTAGCCTTTATCTACGTAACAACA +>Metachirus_nudicaudatus_NC_006516 +------------AATGAACGAAAATCTATTTGCCCCATTCATCACACCCAC---AATTATAGGTATTACAACACTACCAATTATTATTATATTTCCATGTCTTATTTTATCTTCCCCCAA---ACGATGACTACCCAATCGAATTCAAATTTTACAGATATGATTAATTCGCCTAATCACTAAACAAATAATGACAATGCACAATAAACAAGGACGAGCCTGAACTCTAATACTTATATCACTAATCCTATTCATTGCTTCCACCAATTTACTAGGACTCCTACCATACTCTTTTACACCTACTACACAACTTTCCATAAACATTGGTATAGCTATCCCATTATGAGCAGGAACAGTAATTATAGGATTTCGAAATAAACCCAAAATATCTTTAGCCCATTTTTTACCTCAAGGAACACCCACTCCTTTAATTCCAATACTAATTATTATTGAAACTATTAGTCTATTTATTCAACCACTAGCTCTTGCAGTACGACTAACAGCTAACATTACAGCTGGACACCTTCTAATTCACCTTATTGGATCAGCTACGTTAGCTTTATCTTC---AATTAGTATAACCGTATCAACTATTACATTTTCTATCCTATTTCTCCTAACTCTTCTCGAAATTGCTGTAGCTATAATTCAAGCCTATGTTTTTACCCTTCTTGTAAGCTTATATCTACATGATAACTC +>Redunca_arundinum_isolate_MBP12_NC_020794 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTATA---GTATTAGGCCTCCCCCTTGTCACTCTGATTGTCCTATTTCCTAGCTTACTGTTCCCAACATCAAAC---CGACTAGTAAGCAATCGCCTCATCTCCCTCCAACAATGGGCACTTCAACTCGTAACAAAACAAATAATAAATATTCATAACCCTAAAGGACAAACATGAGCATTAATATTAATATCTCTAATTCTATTCATTGGATCAACAAACCTACTAGGTCTATTACCCCACTCATTTACACCAACTACACAGCTATCAATAAATTTAGGCATGGCCATCCCTTTATGAGCAGGAGCTGTAATCACAGGCTTTCGTAATAAAACCAAAACGTCACTTGCTCACTTTTTACCACAAGGAACACCTACCCCACTAATTCCAATATTAGTAATTATTGAAACTATCAGTCTCTTTATTCAACCAATAGCCCTCGCCGTACGACTAACAGCCAACATTACGGCAGGACATCTATTAATTCACCTAATCGGAGGAGCCACACTCGCACTAATAAGC---ATTAGCACCACGATAGCCCTCATTACATTTATTATCCTAGTCCTACTAACAATTCTCGAATTCGCAGTGGCTATAATCCAAGCCTACGTATTCACTCTATTAGTTAGCTTATACTTGCACGACAACACA +>Equus_kiang_NC_020433 +------------TAATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCAA---CAATAATAGGCCTTCCTATTGTAATTCTAATCATCATATTCCCCAGCATCCTATTCCCCTCATCCA---ACCGACTAATCAACAATCGTCTAATCTCAATTCAACAGTGGCTAATCCAACTTACATCAAAACAAATAATAGCTATTCACAACAACAAAGGACAAACTTGAACCCTTATACTCATGTCGCTGATCCTATTCATTGGCTCAACAAACTTATTAGGCCTACTACCCCACTCATTTACACCAACAACACAACTATCAATAAACCTAGGCATAGCCATTCCCCTATGAGCAGGAACAGTATTCATAGGCTTTCGTCATAAAACAAAAGCAGCCCTAGCTCACTTTCTGCCTCAAGGAACACCCATTTTCCTCATTCCCATGCTAGTAATTATTGAAACCATCAGCCTATTTATTCAACCTGTAGCCCTAGCCGTACGGCTAACCGCTAACATTACTGCTGGACATCTTCTAATCCACCTTATCGGAGGGGCAACGCTAGCCCTCATAA---ACATTAGCCCCTCAACAGCCCTTATTACATTCATTATCCTAATTCTACTAACTATCCTCGAATTCGCAGTAGCCATAATCCAAGCCTACGTATTCACTCTCCTAGTAAGTCTCTACCTACATGATAACA +>Rhinolophus_ferrumequinum_korai_NC_016191 +------------AATGAACGAAAATCTATTCGCCTCTTTCATTACCCCTAC---AATAATGGGCCTTCCCATTGTTATTTTAATTATTGTGTTTCCCACCATCCTATTTCCTTCAACCAA---CCGGCTAATTAATAATCGCCTCATTGCCATTCAACAATGACTAATCCACATAACATCAAAACAAATAATGGCCATTCACAACCCCAAAGGTCAAACCTGAACCCTTATACTAATGTCTCTCATCCTATTCATCGGTTCAACAAATCTCCTAGGATTATTGCCCCACTCCTTTACGCCAACCACACAACTATCCATAAACCTGGGCATGGCCATTCCCCTGTGAGCTGGGACCGTAATCCTGGGATTCCGCCACAAGACAAAAGCCTCTCTAGCCCACTTCCTACCACAAGGGACCCCTCTTCCCCTAATTCCAATGCTAGTCATTATCGAAACCATTAGCCTATTTATTCAACCTATAGCTCTGGCCGTACGGCTAACAGCCAATATTACTGCCGGACATCTCCTAATTCACCTAATTGGTGGTGCTACACTAGCCCTACTAAG---TATCAGCACAGCCACTGCCCTCATTACATTTATTATTCTTATCCTGTTGACAATCCTAGAATTTGCCGTCGCCCTAATCCAGGCCTATGTATTTACACTACTGGTTAGCCTGTACCTACACGATAACAC +>Varecia_variegata_isolate_ANOSIB7_NC_026085 +------------ATGAACGAAAATCTATTTGCCTCATTCACTACCCCAACA---ATCGTAGAAATCCCTATTGTTATTATTATTATTATAATTCCTAGCATTTTATTTCCTTCCCCTGCT---CGTCTTATCAATAACCGATTAACTTCTCTACAACAATGACTAATTCAACTAGTACTAAAACAACTTATAACAATCCATAATGCCAAAGGACGAACCTGATCCCTTATACTAGTTTCATTAATTTTATTTATTGCCTCCACTAACCTACTAGGCTTATTACCATACTCATTTACTCCCACTACCCAACTATCCATAAATCTAGGTATAGCAATTCCACTCTGAGCAGCTGCAGTAATTAAAGGTTTACGCCACAAAACAAAAGCATCCTTAGCCCATTTTCTACCACAAGGGACTCCCATCCCTCTAATTCCCGTAATAGTAATTATCGAAACTATCAGCCTCTTTATTCAACCAATAGCCCTAGCTGTACGATTAACTGCTAATATCACAGCAGGTCACCTTCTCATACACTTAATTGGAGGAGCCACCCTAGAACTTATCTCT---ATCTTCCCTTCTACAGCCCCAGTTACACTTATTATTCTTATTCTCCTTATAATTCTTGAATTCGCCGTAGCCCTAATCCAAGCCTACGTCTTCACCCTATTAGTCAGCCTATATTTACAAGATAACACT +>Bubalus_bubalis_NC_006295 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTA---TAATTCTAGGCCTCCCCCTCGTAACTCTTATCGTACTATTCCCCAGCTTACTGTTCCCAACTCCAA---ATCGACTAATAAGTAACCGCCTCATTTCCCTCCAACAATGAATACTTCAACTTGTATCAAAACAAATAATGAGTATCCACAATACCAAGGGACAAACATGAACATTAATACTAATATCCTTAATTTTATTTATTGGATCAACAAACCTACTAGGTCTACTACCCCACTCATTCACACCAACTACACAACTATCAATAAATCTAGGCATAGCTATCCCCCTATGAGCAGGCGCCGTAGTTACAGGCTTCCGCAACAAAACTAAAGCATCACTCGCCCATTTTCTACCACAGGGAACACCAACCCCATTGATCCCAATGCTAGTTATTATCGAGACTATCAGCCTTTTTATTCAACCAGTGGCTCTCGCCGTACGACTAACAGCCAACATTACTGCAGGACACCTGTTAATTCATCTAATCGGAGGAGCTACACTTGCACTAATAA---GCATCAGCATAACAACAGCTCTCATTACATTCATCATCTTAGTCCTTCTTACAATTCTAGAATTTGCAGTGGCTATAATCCAAGCCTACGTATTCACCCTCCTAGTCAGCTTATATCTGCACGACAACA +>Tragelaphus_imberbis_NC_020619 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTAT---AATTTTAGGCCTCCCTCTTGCAACTCTCATCATCATATTCCCTAGCCTGTTGTTCCCAACATCAAA---TCGACTAGTAAACAATCGCCTCATCTCCCTTCAACAATGAGCACTCCAACTTGTGTCAAAACAAATAATAACCATACACAACACCAAAGGACAAACATGGACACTAATGTTGATGTCCCTGATTTTATTTATCGGATCAACAAACCTACTAGGTCTCCTACCTCACTCATTCACACCAACCACACAGCTGTCAATGAACCTAGGCATAGCTATCCCCCTGTGAGCAGGAGCTGTCATCACAGGATTCCGCAACAAAACCAAGACATCACTCGCTCACTTCCTACCACAAGGAACGCCAACCCCACTAATCCCTATACTAGTTATTATCGAAACCATCAGCCTATTTATCCAACCAGTGGCCCTTGCCGTACGACTAACAGCCAACATCACTGCAGGTCACCTGTTGATTCACCTAATTGGAGGAGCCACACTCGCACTAATAAA---CATTAGCACTGCAACAGCTTTTATCACATTCATTATCCTAATCCTACTAACAATCCTAGAATTTGCAGTAGCTATAATCCAAGCCTACGTATTTACCCTCTTAGTCAGCCTGTATCTACATGACAACAC +>Pseudoryx_nghetinhensis_NC_020616 +------------ATGAACGAAAATCTATTTACCTCTTTCATTACCCCTATA---ATTCTAGGCCTGCCCCTCGTAACACTTATTGTACTATTCCCCAGTTTATTATTTCCAACATCAAAT---CGACTAGTAAACAATCGTCTCATCTCTCTTCAACAATGAATACTTCAACTTGTATCAAAACAAATAATAAGCATCCATAACGTCAAAGGGCAAACATGAACATTAATACTGACATCCCTAATTCTATTTATTGGATCAACAAATCTACTAGGCCTATTACCCCATTCATTTACACCAACTACACAACTATCAATAAACCTAGGCATAGCCATCCCTCTATGAGCAGGAGCCGTAATTACAGGATTCCGCAATAAAACTAAAGCATCACTTGCTCACTTCCTGCCACAAGGAACACCAACTTTCCTAATTCCAATACTTATTATTATCGAGACTATTAGCCTTTTCATTCAACCAGTGGCTCTCGCCGTACGACTAACAGCCAACATCACCGCAGGACACCTACTAATTCACCTAATCGGAGGAGCCACGCTCGCACTAATAAGC---ATTAGCACCACAACAGCTTTCATCACATTCACTATTTTAATCCTATTAACGATTCTCGAATTTGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTCCTAGTTAGTCTATACCTACACGACAACACA +>Vulpes_zerda_NC_023459 +------------TAATGAACGAAAATTTATTCGCCTCTTTCACTACCCCTA---CAATAATGGGCCTCCCAATCGCTGTATTAATCGTAATATTCCCATCTATTCTATTCCCATCACCTA---ACCGACTAATTAACAATCGATTAATTTCTATCCAACAGTGATTAATTCAACTTACATCCAAACAGATACTAACAATTCACAACCAAAAAGGACGAACCTGAGCCCTTATGCTGATATCACTGATTTTATTTATTGGCTCGACTAATCTCCTCGGATTGCTACCCCACTCATTCACACCCACAACCCAATTGTCTATAAACCTAGGAATAGCAATTCCCCTGTGAGCAGGGACAGTAATTACCGGGTTCCGCCACAAAACTAAGGCCTCTCTAGCACACTTCCTGCCCCAAGGAACACCCCTCCCCCTAATTCCCATGCTAGTAGTCATCGAGACAATTAGTCTATTCATCCAGCCTATGGCCTTAGCTGTCCGATTAACAGCCAACATTACCGCAGGACACCTATTAATCCACCTAATTGGAGGGGCCACTCTAGCCCTAATCA---ACATCAGTGCTACCACAGCCCTTATTACTTTTATAATTCTAATTTTACTTACCGTTCTCGAATTCGCCGTCGCTCTTATTCAGGCCTACGTCTTTACACTACTAGTAAGTCTATACTTACATGACAATA +>Phalanger_vestitus_NC_008137 +------------AATGAACGAAAATTTATTTGCCACATTCACTACCCCTTC---CATTATAGGTATTACAACACTACCAATTATTATACTCTTTCCCTGCCTAATTCTTACCTCCCCAAA---ACGCTGACTACCCAACCGAATCCAAACCCTACAAATATGACTAATCCGATCCGTCACAAAACAAATGATAACAATCCATAACAAACAAGGCCGAACATGAACCCTAATACTTATATCCCTAATCCTATTCATTGCATCAACCAATCTACTTGGACTATTACCATACTCTTTCACCCCAACCACACAACTCTCCATAAACATTGGTATAGCTATCCCACTATGACTAGGAACTGTTATTATAGGATTTCGAAACAAACCAAAAGCTTCCCTAGCACATTTCTTACCACAAGGTACACCAACCCCACTAATCCCAATACTAATCATTATCGAGACAATTAGCCTATTCATTCAACCACTAGCCTTGGCAGTACGGCTAACAGCCAACATCACCGCAGGACATCTACTTATTCACCTAATTGGCTCAGCAACGCTAGCCTTATCATC---CATCAACATAACAGTATCATCTATCACATTCATCATCCTCCTTCTACTAACGATCCTAGAACTAGCAGTAGCCATAATCCAAGCTTACGTTTTTACCCTCTTAGTAAGTTTGTACCTACATGACAATTC +>Micronycteris_megalotis_NC_022419 +------------ATGAACGAAAATCTATTCGCCTCTTTCATTACCCCTACG---ATAATAGGACTCCCTATTGTCATACTAATTATCATATTTCCAACTATCACATTCCCCTCAACCAAT---CGACTAATCAACAACCGCCTAGTAGCCATCCAACAATGACTAATTCACCTCACATCTAAACAAATACTTTCTATTCACAACCGTAAAGGCCAAACATGAGCCCTCATACTAATATCCCTTATTTTATTTATTGGATCAACCAACTTGCTAGGTCTCTTACCACACTCCTTTACCCCTACAACACAACTTTCAACAAACTTAGCCATAGCCATTCCCCTATGAGCTGGAACAGTCATTCTAGGCTTCCGACACAAAACCAAAGCCTCTCTAGCCCACTTCCTACCGCAAGGAACCCCACTAGCCCTAATTCCCATGTTAGTAGTCATCGAAACAATCAGCCTATTCATTCAACCCGTAGCACTAGCCGTCCGACTCACTGCAAACATCACAGCTGGCCACCTTCTAATTCACCTAATCGGAGGGGCCACTCTCGCCCTAATAAAC---ATTAGCATAACCACCGCCTTCATCACATTCGTAATCCTAGTCCTACTAACAATCCTAGAGTTCGCCGTAGCACTAATCCAAGCCTATGTATTTACCCTACTAGTAAGCCTTTACCTACACGATAACGCC +>Eubalaena_japonica_NC_006931 +------------TAATGAACGAAAATCTATTTGCCCCTTTCATAACCCCAG---TTATAGTAGGTATCCCTATCACCACCCTAATTATTATCCTCCCATCCATTTTATTCCCAACACCAA---ACCGACTAATCAACAACCGCACAATCTCTATCCAACAATGATTAACTAAACTAACATCAAAACAACTAATAAGTACGCACAGCCCTAAAGGACAAACCTGATCTCTAATACTTATTTCATTATTCCTATTTATTGCCTCCACCAATCTTCTTGGAATATTACCCCACTCATTCACACCCACCACACAACTCTCAATAAATGTAGGAATAGCCATCCCCCTATGGGCTGGCACTGTTTTTACTGGATTTCGCAACAAAACAAAAATATCCTTAGCACACCTACTACCACAAGGCACACCCACCTTTCTTATTCCTATGCTAGTAATTATCGAAACTATCAGCCTATTTATTCAACCAGTAGCACTGGCCGTACGACTAACTGCCAACATTACAGCAGGTCACCTACTAATACATTTAATTGGAGAAGCAACCCTTGCACTAATAA---ATATCAGTCTACTTACAACCCTTATCACCTTTATTATTCTTACTCTATTAACCATCCTTGAATTCGCTGTAGCCTTAATCCAAGCCTACGTATTCACCCTCCTAGTAAGCCTATACCTTCATGATAACA +>Lama_glama_NC_012102 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAAC---AATAATAGGACTTCCTATTGTTACCCTTGTTGTCATATTCCCAAGTATATTATTCCCAACCCCCAC---CCGACTAATTAATAACCGCTTAATCTCTTTTCAACATTGGCTAATTCGACTCACGTCTAAGCAAATAATAACTATTCATAATTACAAAGGACAGACCTGGTCCTTAATGCTAATATCTCTAATTATATTTATTGGGGCTACTAACCTTCTAGGACTCCTTCCGCACTCATTTACCCCTACCACACAACTATCAATAAACTTAGGCATAGCAGTTCCTCTATGAGCTGGAACTGTAGTTACTGGCTTCCGCAATAAAACGAAAGCATCACTAGCACATTTCCTCCCCCAAGGAACACCTACACCACTAATCCCCATACTAGTAATTATCGAAACTATCAGCCTGTTCATTCAACCCGTAGCCCTGGCCGTTCGACTAACAGCTAATATCACAGCAGGCCATTTATTAATGCACCTAATTGGAGGAGCTACCCTAGCCCTAATAAA---TATTAGTACACTAACAGCCCTCATCACCTTTGTAGTCCTAATTTTACTTACAATTCTCGAATTTGCCGTAGCTATAATTCAAGCCTATGTTTTTACCCTACTAGTAAGCCTATACCTACATGACAATAC +>Moschus_anhuiensis_NC_020017 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAATA---ATTCTAGGCCTTCCCCTCGCTACTCTCATTGTCATATTTCCCAGCCTATTATTCCCAACATCAAAT---CGATTAATCAACAATCGTCTCCTCTCCCTTCAACAATGAATACTTCAACTTGTATCAAAACAAATAATGGGAATTCACAACACTAAAGGACAAACATGGACACTTATACTAATATCTCTAATCCTATTTATTGGCTCAACAAATCTACTAGGCCTACTTCCCCACTCATTCACACCAACTACACAACTATCAATAAATCTAGGCATGGCTATCCCCTTATGGGCGGGCGCTGTAATTACAGGATTCCGTAACAAAACTAAAGCATCCCTTGCTCACTTCCTACCACAAGGAACACCTACTCCACTAATCCCAATGCTAGTAATTATCGAAACTATTAGCCTCTTTATTCAACCAATAGCCTTAGCAGTACGATTAACAGCTAATATTACTGCAGGACACCTGTTAATTCACCTAATTGGAGGAGCCACACTTGCACTAATAAAT---ATCAGCACCACAACAGCCCTCATCACATTCATTATCCTGATCCTGCTCACAATTCTCGAGTTTGCAGTAGCCATAATCCAAGCTTACGTATTCACTCTTCTAGTTAGCCTATACCTGCATGATAATACA +>Eulemur_rubriventer_isolate_TRA216_NC_026098 +------------TAATGAACGAAAATTTATTCGCCTCTTTCATTACCCCAA---CAATTGTAGGGATTCCTATCGTCATCTTTATCATTATAATTCCAAGCATTCTCTTTCCCTCCCCTA---CTCGCCTGATTAACAATCGACTAACCTCGTTACAACAATGACTAATTCAGTTAATTCTAAAACAACTAATATTAATTCACAACATTAAAGGACGAACTTGATCTCTAATATTAATTTCACTAATTTTATTTATTGGCTCTACTAACTTATTAGGCTTATTGCCCCACTCATTTACCCCTACCACACAACTATCTATAAATTTAGGTATAGCAATTCCACTCTGAGCAGCTGCGGTAATCAAGGGCTTCCGCCACAAAACAAAGATATCCCTGGCCCATTTCCTACCTCAAGGAACACCCATTCCTTTAATTCCCATACTAGTAATTATTGAGACCATTAGCCTCTTCATTCAACCTATAGCCCTAGCCGTACGACTAACTGCTAATATTACAGCAGGTCACCTTCTTATGCATCTAATTGGAGGGGCTACCTTAGTACTTTCTT---CCATCAGCCCTGCTACAGCTTCAATCACATTTATTATCCTTATCCTCCTTACAATTCTTGAATTTGCCGTTGCCCTAATTCAGGCCTACGTATTTACTCTATTAGTTAGCCTTTACTTACATGACAACA +>Bos_taurus_NC_006853 +------------AATGAACGAAAATTTATTTACCTCTTTTATTACCCCTGT---AATTTTAGGTCTCCCTCTCGTAACCCTTATCGTACTATTCCCAAGCCTACTATTCCCAACATCAAA---CCGACTAGTAAGCAATCGCTTTGTAACCCTCCAACAATGAATACTTCAACTTGTATCAAAACAAATAATGAGTATCCACAATTCTAAAGGACAAACATGAACATTAATATTAATATCTCTGATCCTATTTATTGGATCAACAAACCTACTAGGCCTATTACCCCATTCATTCACACCAACAACACAACTATCAATAAACCTAGGCATAGCCATCCCCCTGTGAGCAGGAGCCGTAATTACAGGATTCCGCAATAAAACTAAAGCATCACTTGCCCATTTCTTACCACAAGGAACACCCACTCCACTAATCCCAATACTAGTAATTATTGAAACTATCAGCCTTTTTATTCAACCTATAGCCCTCGCCGTGCGGTTAACAGCTAACATCACTGCAGGACACCTATTAATTCACCTAATCGGAGGAGCTACACTTGCACTAATAAG---CATTAGCACTACAACAGCTCTAATTACATTCACCATTCTAATCCTACTAACAATTCTAGAGTTTGCAGTAGCTATAATCCAAGCCTATGTATTCACTCTCCTAGTCAGCCTATATCTGCATGACAACAC +>Neotetracus_sinensis_NC_019626 +------------ATGAACGAAAATTTATTCGCCTCTTTTATTACCCCAATA---TTTTTAGGAATTCCAGTATTTATTTTTATTACTATATTTCCCATCTTATTTTTCCCTTCTCCATCT---CGACTAATTAATAACCGGACAGTTACCTTACAACAATGAGTAATTAAACTTACTTCTAAACAAATAATATCTATTCATAGCCATAAAGGCCAAACATGAACACTAATATTAACTTCTCTTATTATGTTTATTGGCTCAACAAATCTACTTGGTCTCCTTCCCCACTCATTTACCCCAACAACACAACTCTCCCTTAACCTAGGAATAGCCATTCCATTATGAGCAGGGACTGTAATCCTAGGATTCCGATTTAAAACTAAAGCATCTTTAGCACATTTTCTTCCTCAAGGAACCCCATTAGCCTTAATTCCTATACTTATCCTAATTGAAACTATTAGCTTATTTATTCAACCAGTAGCACTAGCAGTGCGGCTAACAGCAAATATTACAGCAGGACACCTCCTGATTCACCTAATCGGAGGAGCAACCCTAGCACTTACCTCT---ATTAGCCCACCAACAGCATTACTTTCTTTCATTATTCTTCTACTCCTAACTATTCTTGAATTTGCTGTAGCATTAATTCAAGCATATGTTTTTACACTTCTAGTAAGTCTCTACCTACATGACAATACC +>Ozotoceros_bezoarticus_isolate_MRGOb2_NC_020766 +------------TAATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAA---TAATTTTAGGTCTTCCACTCGCTACCTTCATCGTTATTTTTCCTAGTCTACTGTTCCCAACATCAA---ACCGTCTAGTTAACAACCGTCTCATTTCTCTCCAACAATGAGCACTTCAACTTGTATCAAAACAAATAATAGGAACTCATAATACTAAAGGACAAACATGAACATTAATACTAATATCCTTAATTATATTTATTGGGTCAACAAACCTATTAGGTCTCCTACCTCACTCATTTACACCAACCACACAACTGTCAATAAATCTAGGCATAGCCATCCCCCTATGAGCAGGAACCGTAATTACAGGCTTCCGAAATAAGACCAAAGCATCACTTGCCCATTTTCTTCCACAAGGAACGCCCACTCCACTAATTCCCATACTAGTTATTATTGAAACTATTAGCCTTTTTATTCAACCAATTGCCTTGGCTGTACGATTAACAGCCAACATTACCGCAGGACACTTGTTAATTCACCTAATTGGAGGAGCCACACTTGCATTAATAA---ACATTAGCAATACAATAGCCCTCATTACATTTATTATTTTAGTCCTACTTACAGTTCTCGAATTCGCAGTAGCCATGATTCAGGCCTATGTATTTACCCTTCTAGTAAGCCTCTACCTGCATGACAACA +>Niviventer_confucianus_NC_023960 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAAC---AATAATAGGACTCCCAATTGTTGTCACCATTATCATATTCCCATCAATTCTATTTCCATCATCAGA---ACGCTTAATTAGCAACCGTCTTCACTCATTCCAGCACTGACTAATTAAACTTATTATTAAACAAATAATACTAATTCACACACCAAAAGGACGAACTTGGGCCCTAATAATTGTCTCCCTAATTATATTTATTGGCTCAACAAACCTACTAGGACTTCTCCCACACACATTCACCCCTACTACCCAATTATCTATGAACCTAAGTATAGCAATCCCACTATGAGCTGGAGCCGTAATCCTAGGATTCCGACATAAACTAAAAAATTCTTTAGCCCATTTCCTCCCTCAAGGAACACCCATCTCGCTTATCCCTATACTAATTATTATCGAAACCATTAGCCTGTTTATTCAACCAATAGCACTAGCAGTACGACTAACAGCTAATATCACCGCAGGCCACCTACTAATACACCTAATCGGAGGGGCTACTCTAGTTCTCATAGA---CATCAGCCCACCAACTGCCACTATTACATTTATTATCTTACTATTACTAACAGTACTTGAATTCGCTGTAGCCCTAATTCAAGCATATGTATTTACACTTCTAGTAAGCCTCTATTTACATGATAATAC +>Hippotragus_equinus_isolate_B8_6_NC_020712 +------------ATGAACGAAAATTTGTTTACCTCTTTCATTACCCCTATA---ATTCTAGGCCTCCCCCTTGTCACCCTAATCGTCTTATTCCCCAGCTTACTATTTCCTACATCAAAT---CGACTAACTAACAACCGCCTCATCTCCCTCCAACAATGAATACTCCAACTTGTATCAAAACAAATAATAAATATTCACAATACTAAAGGACAAACATGAACATTAATATTAATATCTCTAATTTTATTTATTGGATCAACAAACCTACTAGGCCTATTACCCCACTCATTCACACCAACCACACAACTATCAATAAATTTGGGCATGGCTATCCCTCTATGAGCAGGAGCTGTAATTACAGGCTTCCGTAATAAAACTAAAGCATCACTTGCCCATTTCTTACCACAAGGAACACCGACCCCACTTATCCCAATGCTAGTAATTATCGAGACTATTAGCCTTTTTATCCAACCAATAGCCCTTGCTGTGCGACTAACAGCCAACATTACAGCAGGTCACCTACTAATTCACTTAATTGGAGGAGCCACCCTCACACTAATAAGT---ATTAGCACTATAGCAGCCCTTATTACATTTATTATTCTAATTCTACTGACAATCCTCGAATTCGCAGTAGCTATAATTCAAGCCTACGTATTCACTCTCTTAGTCAGCCTGTACTTGCATGACAACACG +>Tapirus_indicus_isolate_Ti_10_NC_023838 +------------TAATGAACGAAAATTTATTCGCCTCTTTCGCTACCCCAA---CAATAATGGGCCTACCCATTGTTATCCTAATCATTATATTCCCAAGTATTTTATTTCCTTCATCTA---ACCGATTAATCAACAACCGCCTAATCTCCATTCAACAATGACTAATTCAACTTGCATCAAAACAAATAATATCTATCCACAACCACAAAGGACAAACATGAACACTAATACTCATATCACTAATTTTATTCATTGGCTCAACCAACCTACTGGGCTTACTACCGCACTCGTTCACACCTACTACACAACTATCAATAAATCTAGGCATAGCCATCCCACTATGAGCAGGTACGGTATTCATAGGTTTCCGTCACAAGACAAAAGCATCTCTAGCCCATTTCCTCCCTCAAGGAACCCCCATCTTCCTAATCCCAATATTAATTATCATTGAAACCATTAGCCTATTTATCCAACCAGTAGCCCTGGCCGTACGACTTACAGCCAACATTACTGCAGGACACCTCCTAATTCACTTAATTGGAGGAGCAACACTAGCTCTAATAA---ACATCAGCCCCACCACAGCTTTCATCACATTTATTATTCTTATCTTACTTACTATTCTTGAATTCGCAGTAGCTTTAATTCAAGCCTACGTATTTACTCTTCTAGTAAGTCTCTATCTACACGACAACA +>Pygathrix_cinerea_1_RL_2012_NC_018062 +------------AATGAACGAAAATTTATTTACCTCATTTACACACCCAAC---ACTCCTAGGGCTACCAGCCGTAGTACCTATTATTCTATTTCCTACATTACTATTTCCAACCTCAAA---ATATCTTATTAATAATCGACTAATTACTATTCAACAAAATCTAATTCAGCTAGTCGTAAAACAAATAATAATAATTCATAATATTAAAGGACAAACCTGGTCTCTAATACTAATATCCCTAATCATTTTTATTGCCACAACTAACCTTCTCGGACTCTTACCCCACTCATTTACACCTACTGCCCAACTATCAATAAATCTGGCTATAGCAATCCCTCTATGAGCAGGTACAGTAGTTACAGGCCTCCGCTTCAAAACTAAAAGCTCCTTAGCGCACTTTTTACCACAAGGTACACCCACACTACTTATCCCCATATTAGTAGTTATTGAAACCATCAGTTTATTTATTCAACCAGTAGCCCTTGCCGTACGCCTAACCGCCAATATTACAGCAGGACATCTACTTATACACCTAATTGGAAGTGCTACACTAGTACTATCAAC---CATCAGCTTCTCTATAACCTCACTAACCTTAGTGCTTCTAGTATTATTAACAATTCTAGAAATGGCAGTTGCCCTAATTCAGGCCTACGTTTTCACACTATTGGTAAGCCTTTATCTACATGACAGCAC +>Berardius_bairdii_NC_005274 +------------ATGAACGAAAATTTATTTACCTCTTTCACTGTCCCAGTA---GTATTAGGCATTCCTATCACCACCTTAATCATTATATTCCCCACTATTCTATTCCCCTCACCAAAC---CGACTGATTAACAACCGTGTAATTTCCCTTCAACAGTGACTAACTAAACTTACATCAAAACAACTAATAAACACACATAGCCCCAAAGGTCAAACCTGATCCCTAATACTTATTTCACTCCTTCTATTTATTGCCTCTACAAACCTTCTTGGAATATTACCTCACTCATTTACACCAACTACACAACTTTCAATAAATATTGGAATGGCCGTCCCCTTATGGGCTGGTACAGTTATTACAGGCTTCCGTAACAAAACAAAAATATCTCTAGCCCACCTCCTACCACAAGGTACACCCACTTTCCTTATCCCCATGCTAGTAATTATTGAAACTATCAGCCTATTCATTCAACCAGTGGCACTAGCCGTACGATTAACCGCTAACATTACAGCAGGGCATCTATTAATACATCTAATTGGAAAAACGACCCTCGTACTAATAAGC---ATTAACCTACCCATAGCCTTTATCACATTTACAATCCTTATCTTACTAACCATTCTTGAATTCGCAGTCGCTCTAATCCAAGCCTATGTGTTTACTCTCCTAGTAAGCCTATATCTGCACGACAATACA +>Mammuthus_primigenius_NC_007596 +------------TAGTGAACGAAGAACTATCCGCCTTCTTCGATGTACCCG---------------TAGGTACAATAATACTAGCTATTGCGTTTCCAGCAATTCTACTTCCAACTCCAA---ATCGCCTAATTACCAACCGTTGAATTACAATCCAACAATGACTAGTCAAATTAATTATAAAACAACTTCTGTCTATTCATAATACAAAAGGACTGTCATGATCTCTAATATTAATTACTCTAACTTTATTCATTGGTCTAACCAATCTACTAGGTCTATTACCCTATTCATTCGCTCCTACAGCACAACTAACCGTAAACTTAAGCATAGCAATCCCCCTATGGACTGGTACAGTTATCCTGGGCTTCCGATATAAAACTAAAATCTCACTAGCCCATCTTCTCCCACAAGGAACACCTACATTCCTTATCCCTATAATTATTATTATCGAAACCATTAGTCTCCTCATTCGACCAGTCACTCTAGCGGTTCGACTCACCGCTAATATCACGGCAGGTCACTTACTTATTCATTTAACCGGAACCGCCGCACTAACTTTACTAT---CAATTCATTCAATAACAATTACAGTAACATTTATTACTGTAGTTGTACTTACGATCCTGGAACTTGCCGTAGCACTAATTCAGGCCTACGTCTTTGCCCTACTAATTAGCCTCTACCTACATGAGAGTG +>Indri_indri_isolate_TANDRA418_NC_026095 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAAC---AATTGTAGGAATCCCTATCGTAGTCCTAATTATTATGGCTCCTAGCATTCTCTTCCCCTCTTCTAC---CCGCCTTATCACCAGCCGACTAACCTCTCTACAGCAATGGCTGATCCAACTAGTATTGAAACAACTAATAATGATACATAACATCAAGGGACGGACTTGGGCTCTCATATTAATCTCACTTATCCTATTTATTGGATCAACCAACCTACTAGGTCTATTACCCCACTCATTTACTCCAACCACTCAACTATCAATAAATTTAGGTATAGCAATCCCATTATGAGCCGCCGCAGTCATCACAGGCTTTCGTTATAAGACAAAAGTATCCCTGGCTCATCTATTACCGCAAGGAACACCTGCCCTCCTTATCCCTATGCTAGTAATCATCGAAACAATTAGCCTATTTATTCAACCTATAGCATTAGCTGTGCGACTAACAGCTAACATCACAGCTGGTCACTTACTCATACATCTAGTTGGAGGGGCTACTTTAGTATTAACCTC---CATTAGTCCTACCACGGCCTCAATCACACTCATCATTCTAGTCCTCCTTACAATCCTAGAATTCGCCGTCGCTTTAATCCAAGCTTATGTCTTTACTCTACTAGTTAGCCTCTATTTACATGATAACAC +>Propithecus_edwardsi_isolate_VALO71_NC_026099 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAACA---ATTGTAGGAATCCCTATTGTGATCCTAATCATCGCAGTCCCTAGCATTCTCTTCCCTTCGCCCACC---CGTCTCATTTCCAACCGATTGACTTCCTTACAACAATGACTTATTCAACTAGTACTAAAACAACTAATAATGATACACAGCATTAAAGGACGAACTTGGTCCCTCATACTAATTTCACTAATCCTATTTATTGGTTCAACCAACTTACTAGGTCTATTACCCCACTCATTCACCCCCACTACTCAACTATCAATGAATCTAGGCATAGCCATCCCACTATGAGCTGCTGCAGTCATTACAGGCTTTCGTCACAAAACAAAAATATCCTTAGCTCACCTACTACCACAAGGAACGCCAGTCCCTCTTATTCCCATACTAGTAATCATCGAAACCATTAGCCTTTTCATTCAACCTATAGCATTAGCCGTACGATTGACGGCTAACATTACAGCAGGCCACCTACTCATACACTTAATTGGTGGAGCCACCTTAGTATTAACCTCA---ATTAGTCCCACCACTGCCTCAATTACATTTACTATTCTTATTCTCCTTACAATCCTTGAATTTGCCGTCGCCCTAATCCAAGCCTATGTATTTACTTTACTAGTTAGCCTTTATTTACATGACAACACC +>Connochaetes_gnou_isolate_SUN61_NC_020698 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTA---TAATGCTAGGCCTCCCCCTTGTAACCCTTATCGTCTTATTCCCTAGCCTGCTGTTTCCTACATCAA---ACCGACTAGTTAATAATCGCCTCATCTCTATCCAACAATGACTACTTCAACTCGTATCAAAACAAATAATGAGCATTCACAATACCAAAGGACAAACATGAGCATTGATACTAATATCCCTAATTCTGTTTATTGGGTCTACAAACTTACTAGGCCTACTACCCCACTCATTTACACCAACCACACAACTATCAATAAACTTGGGTATGGCTATCCCCCTATGAGCAGGAGCAGTAATCACAGGCTTTCGCAACAAAACCAAAACGTCACTCGCCCACTTCCTACCACAAGGAACACCAACCCCACTAATCCCAATACTAGTAATTATCGAAACCATTAGCCTTTTCATTCAACCAATAGCCCTCGCTGTACGACTAACAGCCAACATCACAGCAGGACACCTATTAATGCACCTAATCGGAGGAGCCACCCTTGCACTAATAA---GCATCAGTACTACAACAGCTCTCATTACTTTCATTATCCTAGTTTTACTAACAATCCTCGAGTTCGCAGTAGCCATAATTCAAGCTTACGTATTTACCCTCCTAGTCAGCCTGTACCTGCACGATAATA +>Mammuthus_columbi_NC_015529 +------------AGTGAACGAAGAACTATCCGCCTTCTTCGATGTACCCGT---------------AGGTACAATAATACTAGCTATTGCGTTTCCAGCAATTCTACTTCCAACTCCAAA---TCGCCTAATTACCAACCGTTGAATTACAATCCAACAATGACTAGTCAAATTAATTATAAAACAACTTCTGTCTATTCATAATACAAAAGGACTGTCATGATCTCTAATATTAATTACTCTAACTTTATTCATTGGTCTAACCAATCTACTAGGTCTATTACCCTATTCATTCGCTCCTACAGCACAACTAACCGTAAACTTAAGCATAGCAATCCCCCTATGGACTGGTACAGTTATCCTGGGCTTCCGATATAAAACTAAAATCTCACTAGCCCATCTTCTCCCACAAGGAACACCTACATTCCTTATCCCTATAATTATTATTATCGAAACCATTAGTCTCCTCATTCGACCAGTCACTCTAGCGGTTCGACTCACCGCTAATATCACGGCAGGTCACTTACTTATTCATTTAACCGGAACCGCCGCACTAACTTTACTATC---AATTCATTCAATAACAATTACAGTAACATTTATTACTGTAGTTGTACTTACAATCCTGGAACTTGCCGTAGCACTAATTCAGGCCTACGTCTTTGCCCTACTAATTAGCCTCTACCTACATGAGAGTGC +>Microtus_kikuchii_NC_003041 +------------ATGAACGAAAATCTATTCGCCTCTTTCATTACCCCAACA---ATAATAGGCCTCCCTATTGTTATTATTATTATTATACTCCCCGCAATACTCATAACTTCTTCCAAA---CGACTGGTATCAAATCGCTTTCACTCATTTCAACAATGACTAATCAAACTTATTATCAAACAAATAATATTGATCCACTCTCCCAAAGGACGCACATGGTCACTCATGCTAGTATCCTTAATTATATTCATCGGCTCAACAAACCTCCTAGGCCTCCTACCACACACATTCACCCCAACAACACAACTATCAATAAATTTAGGAATGGCAATCCCACTATGAGCCGGAGCCGTAATCCTAGGCTTCCGCCATAAACTAAAATCCTCATTAGCCCACTTTCTACCCCAAGGCACACCTATCTCTCTAATTCCCATACTAATTATTATCGAAACCATCAGCTTATTCATCCAACCCATGGCCCTCGCGGTCCGTTTAACAGCCAACATCACCGCAGGCCATTTATTAATTCACCTAATCGGTGGGGCTACACTAGTCCTCACAAAC---ATTAGCCCGCCGACAGCCACAATTACATTCATCATCCTAGCCCTTCTTACTATCCTAGAATTTGCCGTAGCCCTAATTCAAGCTTACGTATTTACCCTACTAGTAAGCCTTTACCTACACGATAACACC +>Ourebia_ourebi_isolate_South_NC_020733 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTA---TAATCCTAGGCCTCCCTCTCGTTACTCTCATCGTCTTATTTCCCAGTTTACTATTTCCCACATCAA---ACCGACTAATAAACAACCGCCTTATCTCCCTTCAACAATGAGTACTTCAACTTGTGTCAAAACAAATGATAAGCATCCACAATCCCAAGGGACAAACATGAGCCCTAATACTCATGTCCTTAATTTTATTCATTGGCTCAACAAACCTCTTAGGCCTATTGCCCCACTCCTTTACACCAACCACACAACTATCAATAAACCTAGGAATGGCTATCCCTCTGTGAGCAGGAGCAGTAATCACCGGCTTTCGCAACAAAACTAAAACATCACTCGCCCATTTCCTACCCCAAGGAACACCAACCCCCCTGATCCCCATACTAGTAATCATTGAAACCATTAGCCTATTTATTCAACCGGTAGCCCTCGCCGTACGACTAACTGCCAACATCACAGCAGGACACCTACTAATTCACTTGATCGGAGGAGCTACACTCGCACTAATAA---GCATCAGCACTACGACAGCCCTCATCACATTCATCATTTTAGTCCTACTAACAATTCTCGAATTTGCAGTAGCTATAATCCAAGCCTACGTATTCACTCTTTTAGTCAGCCTATACCTACACGATAACA +>Martes_foina_voucher_YP6135_NC_020643 +------------AATGAACGAAAATTTATTCTCCTCTTTCATTACCCCTAC---AGTAATAGGACTCCCTATTGTCATTGTCATCACTATATTCCCAAGTATCATATTTCCCTCACCAAA---CCGATTAATCAACAACCGGCTCGTCTCCATCCAACAATGGCTGGTGCAATTAACATCAAAACAAATACTATCTATCCACAATCAAAAGGGACAAACCTGGGCACTAATATTAATATCCCTAATCCTGTTTATTGGCTCTACTAACCTACTAGGCCTCCTACCACACTCATTCACTCCCACCACACAACTATCCTTGAACCTAGGCATGGCTGTCCCCCTATGAGCGGGCACAGTAATTACAGGCTTCCGACATAAAACAAAAGCCTCTTTAGCCCATTTCCTGCCACAGGGAACACCACTCCCTCTAATTCCCATACTCGTAATCATTGAGACCATTAGTCTATTCATCCAACCCATGGCCCTAGCCGTACGACTAACAGCTAATATCACTGCAGGCCACTTATTAATTCACCTAATTGGAGGGACCACCCTGGCCTTAATGAG---TATCAACACTATCACAGCTATGGTAACCTTTATTATCCTTATCCTTCTAACCATCCTAGAATTTGCAGTAGCCCTTATCCAAGCCTACGTATTTACTTTACTAGTAAGCCTGTACCTACATGATAACAC +>Cervus_nippon_kopschi_NC_016178 +------------ATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAATA---ATACTAGGCCTTCCACTAGCTACTCTTATCGTTATATTTCCTAGCCTATTATTTCCAACATCAAAT---CGCCTAGTAAATAACCGTCTTATTTCCCTCCAACAATGGATACTTCAACTTGTATCAAAACAAATAATAGGAATTCACAATGCCAAAGGACAAACATGAACATTAATACTCATGTCTCTAATCTTATTTATTGGATCCACAAATCTTCTGGGCTTATTACCCCATTCATTTACACCAACCACACAACTATCAATAAACCTAGGCATAGCCATTCCCCTGTGAGCAGGAGCTGTAATTACAGGTTTCCGTAATAAAACTAAAGCATCGCTTGCTCACTTTCTTCCACAAGGAACTCCAACCCCACTAATCCCCATACTAGTTATTATCGAAACTATTAGTCTTTTTATTCAACCAATCGCTTTAGCCGTACGACTAACAGCCAATATTACTGCAGGACACCTACTAATACACCTAATTGGAGGAGCTGCACTTGCACTAATAAAT---ATCAGCACTACAATAGCTTTTATCACATTCATTATTCTAGTCCTACTCACAATCCTTGAGTTTGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTTCTAGTCAGCCTTTACTTGCATGACAACACA +>Taxidea_taxus_voucher_ROM111450_NC_020646 +------------TAATGAACGAAAATTTATTCTCCTCTTTCATTACCCCTA---CAATAATAGGACTCCCTATTGTTGTTATTATTACAATATTCCCAAGCATCTTATTCCCCTCCCCAA---ACCGATTAGTTCCTAATCGACTTATCTCTATTCAACAATGACTAGTCCAACTAACATCGAAACAAATATTATCTATTCACAGCTCAAAAGGACAAACCTGAGCATTAATACTGATATCTCTCATCCTATTCATTGGCTCTACCAACCTACTAGGCCTCTTACCCCATTCGTTTACCCCCACCACACAACTATCTCTAAACCTAGGAATAGCCATCCCCCTATGAGCAGGCACAGTAATTATCGGATTCCGACACAAAACTAAAGCTTCCCTAGCCCACTTTCTACCACAAGGAACCCCTCTTCCCCTGATTCCTATACTCGTAGTCATTGAAACTATTAGCTTATTTATCCAACCTATGGCCCTAGCTGTACGACTAACAGCCAATATCACTGCAGGCCACCTATTAATTCACCTAATTGGCGGAGCTACCCTAGTCCTAACAA---ACATAAGCACTATCGCAGCCATAGTAACTTTCACCATTCTTATCCTACTAACCATTCTAGAATTTGCAGTAGCCCTCATTCAAGCCTATGTCTTCACCCTACTAGTAAGCCTATACCTACATGACAACA +>Monodelphis_domestica_NC_006299 +------------AATGAACGAAAATTTATTTGCCCCATTCGTCACACCAAC---AATTATAGGTATTACAACCCTACCTATTATTATTATATTTCCCTGTGTTATACTATCATCCCCAAA---ACGATGACTACCAAACCGAATTCAAACACTACAAATCTGACTAATTCGCTTAATTACTAAACAAATAATGACAATGCATAACAAACAAGGACGAACCTGGACCCTAATACTAATCTCTTTAATTCTCTTTATCGCTTCTACTAATCTCTTAGGGCTACTCCCATATTCATTCACACCTACAACTCAACTATCAATAAATATTGGAATAGCTATCCCACTATGAGCCGGAACAGTAATTATAGGATTCCGAAACAAACCTAAAATCTCTTTAGCTCACTTCCTACCACAAGGTACTCCAACACCCCTAATTCCTATATTAATTATTATTGAGACAATTAGCTTATTTATTCAACCCCTAGCCTTAGCTGTACGATTAACTGCCAATATCACTGCAGGACATCTCCTAATTCACCTAATTGGAGCAGCCACTTTAGCCCTATCATC---AATTAATACAACCGTTTCAACCATTACATTTTCAATTCTATTCCTTCTAACCATCTTAGAGCTAGCAGTAGCTATAATTCAAGCCTACGTATTCACGCTCCTAGTTAGTCTATACTTACACGATAATTC +>Ursus_americanus_NC_003426 +------------ATGAACGAAAGTTTGTTCACCTCTTTTATTACCCCAACA---ATAATGGGAATTCCTATTGTAGTATTAATCATTATGTTTCCGAGCATTCTATTTCCTTCTCCTAGT---CGACTAGTCAATAACCGCTTAGTATCTATTCAACAGTGACTAGTCCGACTAACATCAAAACAAATACTTTCCATTCATAATCATAAAGGACAAACCTGAGCACTAATGTTGATGTCACTAATCCTATTTATTGGCTCGACCAATCTTCTGGGTCTGTTGCCACACTCATTCACACCCACCACACAACTGTCAATGAATCTGGGAATAGCTATTCCCTTGTGGACAGGCACAGTTGCTATCGGACTTCGATACAAGACCAAGGCATCCTTGGCTCACTTTCTACCTCAAGGAACACCTTTTCCCCTAATCCCTATACTTGTAATTATCGAAACGATCAGCCTATTCATCCAACCTATAGCCTTAGCCGTTCGACTAACCGCTAACATTACTGCAGGTCACCTGCTCATCCATTTGATTGGGGGAGCTACTCTGGCCCTAACAAGT---ATTAGCACCATTACAGCCCTTATCACCTTTACCATTCTAGTGCTACTCACTATTCTTGAGTTCGCTGTAGCCCTCATTCAGGCCTACGTCTTCACTCTACTAGTAAGCCTATACTTACACGATAACACC +>Microtus_levis_NC_008064 +------------TAATGAACGAAAATTTATTCGCCTCTTTCATTACCCCTA---CAATAATAGGCTTACCTATCGTCGTACTTATTATTATACTCCCATCTATACTTATAACTTCCTCCA---AACGACTAATCTCTAATCGCTTCCACTCATTCCAACAATGACTAGTAAAACTTATCATTAAACAAATAATGCTAATTCACTCACCAAAAGGACGCACATGATCACTCATACTAGTGTCCCTAATCATATTCATTGGCTCAACTAACCTTCTAGGACTCCTACCACATACATTCACTCCCACAACACAATTATCTACAAATTTAGGTATAGCAATCCCCCTATGAGCTGGAGCCGTTATCCTAGGTTTCCGTCACAAACTAAAAGCCTCATTAGCCCACTTTCTACCACAAGGCACCCCTATCTCCCTGATCCCTATACTTATTATTATTGAAACAATTAGCCTGTTTATTCAACCTATGGCCCTAGCAGTCCGTCTCACAGCCAACATCACCGCAGGCCACTTGTTAATTCACTTAATCGGAGGCGCTACACTAGTCCTCACAA---GCATTAGTCCACCAACAGCTACAATCACTTTTATTATCCTAGCCCTTCTCACCATCCTAGAATTTGCCGTAGCCCTAATTCAAGCCTATGTGTTTACTTTACTAGTAAGCCTCTATTTACATGATAACA +>Callosciurus_erythraeus_NC_025550 +------------AATGAACGAAAATCTATTTGCCTCTTTCACTACCCCTAC---AATAATAGGCCTCCCTATTGTTATCCTCATCATCTTATTCCCTAACATCTTATTCCCATCACCTAA---CCGACTCATTAATAACCGCCTTACCTCTCTACAACAATGACTAATTCAATTAATCCTAAAACAAATAATAATAATACACAACTTAAAAGGACGAACCTGATCCCTAATATTAATTTCACTAATCCTATTTATCGGATCTACAAACCTCTTAGGCCTCCTACCCCACTCCTTCACACCAACTACTCAACTATCAATAAACCTGGGCATAGCTATTCCCCTATGAGCCGGAGCAGTAATTACAGGCTTTCGCCATAAAACCAAAGCATCACTGGCCCATTTCCTCCCTCAAGGCACCCCAATCCCACTTATTCCTATACTAATTATCATTGAAACCATTAGCCTATTTATTCAACCAATAGCCCTGGCTGTCCGATTAACAGCAAACATTACAGCCGGCCACCTACTCATGCACCTAATTGGAGGAGCCACACTAGTCCTAACATC---CATCAGCCCCCCCACAGCAATAATCACCTTTATTATCCTTATCCTTTTAACAATACTTGAATTCGCGGTAGCCCTGATTCAAGCTTATGTCTTTACTCTCCTAGTAAGCCTATACTTACACGATAATAC +>Damaliscus_pygargus_NC_020627 +------------ATGAACGAAAATCTGTTTGCCTCTTTCATTACCCCTATA---ATACTAGGCCTCCCCCTTGTTACTCTCATCGTCTTATTCCCTAGCCTGCTATTTCCTACATCAAAC---CGACTGATCAATAACCGCCTCATCTCCCTCCAGCAATGACTACTCCAACTCGTATCAAAACAAATAATGAGTATTCACAACACCAAAGGACAAACATGAGCACTAATATTAATGTCTCTAATCCTATTTATTGGATCTACAAATCTTCTGGGTCTATTGCCCCACTCATTCACACCAACCACACAGCTATCAATAAACTTGGGTATAGCCATCCCCCTATGAGCAGGAGCAGTAGTTACAGGTTTCCGCAACAAGACTAAAGCATCACTCGCTCACTTTCTACCACAGGGAACACCAACCCCACTAATTCCAATGTTAGTAATTATCGAAACTATTAGCCTCTTCATCCAACCAGTAGCCCTCGCCGTACGGTTGACAGCCAACATCACAGCAGGACACCTGTTAATGCACTTAATCGGAGGGGCCACCCTTGCCCTAATAAAC---ATCAGTACCACAACAGCTCTCATCACCTTCATCATCCTAGTACTGCTAACAATCCTCGAATTCGCAGTAGCCATAATTCAAGCCTACGTGTTTACCCTCCTAGTCAGCCTGTATTTGCACGATAACACA +>Dactylopsila_trivirgata_NC_008134 +------------TAATGAACGAAAACTTATTTGCTCCATTCGTCACACCTA---CTATCCTAGGTATTACAACTCTACCGATCATTATACTATTCCCATGTTTAATTCTCAGTTCTCCTA---AACGATGACTACCCAGCCGAATTCAAACTCTTCAAATCTGACTAATTCGACTAATTACCAAACAAATAATAACAATACACAACAAACAAGGACGATCATGGTCTCTAATACTAATATCACTAATCCTATTTATCGCATCCACTAATCTACTAGGTCTCCTCCCATATTCATTCACTCCTACAACTCAACTTTCAATAAACATTGGCATAGCTATCCCACTATGAATAGGAACAGTAGTAATAGGATTTCGCAACAAGCCAAAATCATCTCTAGCTCACTTCTTACCACAAGGAACGCCTACTGCACTAATTCCAATATTAATTATTATCGAAACTATCAGTCTATTCATTCAACCACTAGCCTTAGCAGTACGACTAACAGCCAATATTACCGCAGGACACCTACTTATTCACCTTATTGGCTCCGCTACCCTAGCCTTATCAT---CTATTAACATAACCGTATCAACCATTACGATTACTATCTTATTCTTATTGACGATCCTAGAACTCGCCGTAGGCATAATTCAAGCTTACGTATTTACCCTACTAGTAAGCCTTTACTTACATGATAAGT +>Balaenoptera_brydei_NC_006928 +------------AATGAACGAAAATTTATTTGCCCCTTTTATAATCCCAAC---AATGCTAGGCATTCCTATCACCACTCTAATCATCATTCTTCCATCTGTCCTATTTCCCACACCAAA---TCGTCTAATCAATAATCGTACGATCTCCATTCAACAATGATTAACCAAGCTCACATCAAAACAACTAATAAATGTACACAGTCCTAAAGGACAAACTTGATCTTTAATACTCATTTCGCTGTTCCTATTTATTGCCTCCACTAATCTCCTTGGAATATTACCCCACTCATTTACACCCACCACACAACTCTCAATGAACATAGGAATAGCTATCCCCCTATGGGCTGGTACCGTTGCCACAGGTTTTCGCAACAAAACAAAAATATCCTTAGCCCATTTACTACCACAAGGCACACCCACCTTTCTTATTCCTATGCTAGTAATCATTGAAACCATCAGTCTATTTATTCAACCAGTAGCACTAGCCGTACGACTAACTGCCAATATCACAGCAGGTCACTTACTAATGCATCTGATCGGAGAGACAACCCTTGTACTAATAAA---CACCAGCCTATTTACAGCCCTTATCACTTTCACTATCCTTGCTCTACTAACTATTCTTGAATTTGCTGTCGCCCTTATTCAAGCTTACGTATTTACTCTTTTAGTAAGCCTATACCTTCACGATAATAC +>Gazella_subgutturosa_isolate_PhC1_NC_020710 +------------ATGAACGAAAATCTATTTACCTCTTTCATTACCCCTATA---ATTCTAGGCCTCCCCCTCGTTACTCTAATTGTCTTATTCCCTAGCCTACTATTTCCAACATCAAAC---CGACTAATAAATAACCGCCTTATCTCTCTTCAACAATGAGTACTTCAACTTGTATCAAAACAAATAATAAGCATCCACAACCCCAAAGGACAAACATGAACACTTATACTGATATCCTTAATTCTATTTATTGGGTCAACAAACTTACTAGGCCTACTACCCCACTCTTTTACACCAACTACACAACTATCAATAAACCTAGGTATAGCCATTCCCCTATGAGCAGGAGCTGTAATCACGGGCTTCCGCAACAAAACTAAAGCATCACTTGCCCATTTCTTACCACAAGGAACACCCACCCCTCTAATCCCTATACTAGTAATTATCGAAACTATTAGCCTATTCATTCAACCAGTAGCCCTCGCAGTACGATTAACAGCCAATATTACAGCAGGACACCTATTAATTCACCTAATTGGAGGAGCTACATTGGCACTAATAAAT---ATTAGCACTACAATAGCTCTTATTACATTTATTATTTTAGTTTTACTAACAATTCTTGAATTCGCAGTAGCCATAATCCAAGCCTACGTATTTACTCTTTTAGTCAGCCTATATTTACACGATAACACA +>Trachypithecus_hatinhensis_NC_019579 +------------TAATGAACGAAAATTTATTTACTCCATTTACAACCCCAA---CACTCCTAACTCTACCCGCTGTAGTACCCATTATTCTATTTCCCACATTACTATTTCCAACCTCCA---AGCACCTTGTTAACAATCGACTAATTACTATTCAACAAAATCTGATTCAACTTACCTTAAAACAAATAATAACAATTCATAATACAAAAGGACAAACCTGGTCTCTAATGCTAATATCTCTAATTATTTTTATTGCCACAACCAACCTCCTCGGACTACTACCCCACTCATTTACACCTACCGCCCAGCTGTCTATGAATTTGGCAATGGCAATCCCTCTATGGGCTGGTACAGTGATTACAGGCCTCCGCTTTAAAACCAAAAATTCCCTAGCCCATTTTCTACCACAAGGCACACCCACATTTCTTATCCCCATACTAGTAATTATTGAAACTATCAGCTTATTTATTCAACCAGTGGCCCTAGCTGTACGTCTAACCGCCAATATCACAGCAGGACATCTACTCATGCATCTAATCGGAAGTGCCGTATTAGCATTATTAA---CCATTAATTTTTTTGCAACTTCACTAACCTTCGTACTCCTCTTGCTATTAACAATCCTAGAAATTGCAGTAGCCCTAATCCAAGCCTATGTTTTCACGCTCTTAGTAAGCCTTTACTTACATGATAATA +>Distoechurus_pennatus_NC_008145 +------------AATGAACGAAAATTTATTTGCCCCATTCATCACCCCTAC---AATCATAGGTATTTCCACTTTACCCATTATTATAATATTCCCCTGCCTCATTCTCACTTCACCTAA---ACGCTGATTACCTAACCGCATTCAAACATTACAAATCTGACTTATCCGAATAATTACAAAACAAATAATAATAATGCACAACAAACAAGGCCGATCATGAACACTTATACTCATATCCCTTATCCTATTTATTGCATCAACCAATCTTCTAGGATTATTACCATACTCCTTCACCCCTACAACCCAACTTTCCATAAACATTGGAATAGCAATTCCACTATGAATAGGAACAGTCACTATAGGTTTCCGAAATAAACCAAAAATATCATTAGCCCATTTCCTTCCTCAAGGTACACCAACACCTCTTATTCCAATACTTATTGTTATTGAAACAATCAGCCTCTTCATCCAACCCTTAGCCTTAGCAGTTCGACTTACAGCTAATATCACTGCAGGCCACCTACTTATTCATCTGATTGGTTCTGCAACACTAGCCCTTTCATC---AATTAGTATAACAATCTCATCCATCACATTCACCATTCTCTTCCTCTTGACCATCCTCGAACTAGCAGTAGCAATAATTCAAGCTTATGTATTTACCCTTCTAGTAAGCTTATATCTCCATGATAATAC +>Caenolestes_fuliginosus_NC_005828 +------------ATGAACGAAAATCTATTTGCCCCATTCATCACCCCTACA---ATCTTAGGTATTACAACACTACCAATAGTAATATTACTTCCATGCTTAATTCTTTCATCACCCAAA---CGATGACTACCAAACCGAATTCAAATTTTACAGATCTGACTCATTCGACTTATTACAAAACAAATAATAATTATACATAATACTCAGGGCCGATCATGATCTCTAATACTTATATCCTTAATCCTATTCATTGCTTCAACTAACCTACTAGGTCTTCTTCCATACTCATTTACACCAACCACCCAACTATCAATAAATATTGGTATAGCAATTCCACTATGAATAGGCACCGTAATTACAGGATTCCGAAATAAACCTAAAGCATCATTGGCCCACTTTCTTCCTCAAGGAACACCTACCCCCCTCATCCCTATACTAATTATTATCGAAACAATTAGTCTATTTATTCAACCCCTAGCCTTAGCCGTCCGACTAACCGCTAATATTACCGCTGGCCACCTACTAATCCACCTAATTGGCTCAGCAACACTAGCCCTATCTTCC---ATTAACATAGCTGTATCAATAATTACATTTATTATTCTATTCTTATTAACAATTCTTGAACTTGCAGTAGCAATGATTCAAGCTTATGTTTTTACCCTACTAGTAAGTCTATACCTACATGATAATACC +>Bos_grunniens_NC_006380 +------------TAATGAACGAAAATTTATTTGCCTCTTTTATTACCCCTA---TAATTCTAGGTCTCCCCCTCGTAACTCTTATCGTACTATTCCCCAGCCTACTATTCCCAACATCAA---ATCGATTAGTGAATAATCGCTTTGTAACTCTCCAACAATGAATACTCCAACTTGTATCAAAACAAATAATGAGTATCCACAACCCCAAAGGACAAACATGAACATTAATATTAATATCTCTAATTCTATTTATTGGGTCAACAAACCTATTAGGCCTGTTACCCCATTCATTCACACCAACAACACAACTATCAATAAACCTAGGCATAGCCATTCCCCTGTGAGCAGGAGCCGTAATTACAGGATTCCGCAATAAAACTAAAACATCACTTGCCCATTTCTTACCACAAGGAACACCAACTCCACTAATCCCAATACTAGTAATTATCGAAACTATCAGCCTTTTTATTCAACCTATAGCCCTCGCCGTGCGGTTAACAGCCAACATCACTGCAGGACATCTATTAATTCACTTAATCGGAGGGGCTACACTTGCACTAATAA---GTATTAGCGCTACAACAGCTCTAATTACATTTATTATTCTAATCCTACTAACAATCCTAGAATTTGCAGTAGCTATAATCCAAGCCTATGTATTCACCCTTCTAGTCAGCCTATATCTGCATGACAACA +>Chiropotes_albinasus_NC_021946 +------------AATGAACCAAAATCTATTCGCCTCTTTCAACATCCCTAT---TATCCTAGGAATTCCAATAGTTACGCTGGTAATTCTATTTCCCGCCATACTACTAGCACCCCCTAA---CAACTTAATCAACAACCGATTATCTTCTCTCCAACAATGATTGATTCAACTTACATTGAAACAAATAATAATCACCCACACCACAAAAGGACGAACTTGATCTCTTATGCTACTGACACTAATTACCTTTATTGCCCTAAATAACTTACTAGGACTAACACCCTATGCATTCACACCAACCACCCAACTATCAATAAACCTAGGCATAGCAATTCCTCTATGAACAGCCACCGTGCTTGTCGGACTTCGATTTAAAACAAAATCATCCTTAGCCCATCTCCTACCCCAAGGAACCCCTACCCCGCTTATTCCTATTCTAATTATTATTGAAACAATCAGCCTCTTTATTCAACCAGTAGCATTAGCCGTACGATTGACAGCTAACATCACAGCAGGCCACCTACTAATGCACTTACTTGGAAGCACTTCACTAACCCTGCTGTC---CATTTATCTCTCCTCATCCTTAGTTACTATCATCGTTATTATCCTACTGATTACCTTAGAACTGGGCGTAGCCCTAATTCAAGCATATGTCTTTACACTTCTAGTAAGCCTCTACTTACACAACAACAC +>Mazama_gouazoupira_isolate_MRGsp2_NC_020720 +------------ATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAGTA---ATCTTAGGTATTCCACTCGCTATTTTCATTGTTATTTTCCCTAGTCTGCTATTCCCAACATCAAAT---CGTCTAGTTAACAACCGTCTTATTTCCCTCCAACAATGAGTACTTCAACTTACATCAAAACAAATAATAGGAAACCATAATATCAAAGGACAAACATGAACATTAATATTAATATCCCTAATTATATTTATCGGATCAACAAATCTATTAGGTCTCCTACCTCACTCATTCACACCAACCACACAACTGTCAATAAATCTAGGCATAGCCATCCCCCTATGAGCAGGAACCGTAATTACAGGCTTCCGGAATAAAACCAAAGCATCACTCGCCCATTTTCTCCCACAAGGAACACCCACTCCACTAATTCCCATATTAGTCGTTATTGAGACTATTAGCCTTTTCATTCAACCAATTGCCTTAGCTGTACGATTAACAGCTAATATTACCGCAGGACACTTACTAATTCACCTAATCGGAGGAGCTACACTTACATTAATAAAC---ATCAGCACTACAATAGCCCTTATTACATTTATTATTCTAGTCCTACTCACAATTCTCGAATTCGCAGTAGCCATAATCCAGGCCTATGTATTTACCCTCCTAGTAAGTCTCTATCTGCATGATAACACA +>Martes_flavigula_NC_012141 +------------TAATGAACGAAAATTTATTCTCCTCTTTCATTACCCCTA---CAATAATAGGACTCCCTATCGTCATCATCATTACCATATTTCCAAGCATCATATTCCCTTCCCCAA---GCCGACTAATCAACAACCGACTTATTTCCATCCAGCAATGATTAGTTCAACTAACATCAAAACAGATACTGTCCATCCACAACCAAAAGGGACAAACCTGAGCATTGATACTGATGTCCTTAATCCTATTTATTGGTTCTACCAACCTACTAGGACTCTTACCACATTCATTTACCCCTACCACACAATTATCTCTAAACCTAGGAATGGCTATCCCCCTATGAGCAGGCACAGTGGCCACTGGCTTCCGATACAAAACAAAAGCCTCTTTAGCCCACTTTCTGCCACAAGGAACACCACTTCCCCTAATTCCCATGCTTGTAATCATTGAAACTATCAGTCTATTCATCCAACCTATAGCTTTAGCCGTACGACTGACAGCCAACATCACCGCAGGTCACTTATTGATTCACCTAATCGGAGGAGCCACTCTGGCTTTAATAA---ATATCAGTACCATTACAGCTATAGTAACCTTTATTATCCTTGTTCTCCTGACCATCCTAGAATTTGCAGTAGCCCTAATTCAAGCATACGTCTTTACCTTATTAGTAAGCCTATATCTACATGATAATA +>Helarctos_malayanus_NC_009968 +------------AATGAACGAAAATCTGTTCACCTCTTTTATTACCCCAAC---GATAATAGGGATTCCTGTTGTAGTCCTAATTGTCATGTCTCCGAGCATTTTATTTCCTTCTCCCAG---TCGGCTAATCGACAACCGCTTGGTATCTATTCAACAGTGACTAGTCCGACTAACATCAAAACAAATACTATCCACCCATAATCACAAAGGACAAACCTGAGCACTAATGTTAATATCATTAATCCTATTTATTGGCTCAACTAATCTTCTAGGCCTATTACCACACTCATTCACACCTACCACACAGCTGTCAATGAACCTGGGAATGGCTATTCCCCTGTGAGCAGGTACAGTTGCTATCGGGTTCCGATATAAGACCAAAGCATCCCTGGCTCACTTTCTACCCCAAGGAACACCTTTTCCTCTAATCCCTATACTCGTAATTATTGAAACAATTAGCCTGTTCATCCAGCCCATGGCCTTAGCCGTTCGACTGACCGCTAATATTACTGCAGGCCACTTGCTCATCCATTTAATTGGGGGAGCTACTTTGGCTCTAATTAA---CATCAGCACCATTACAGCCCTTATTACCTTTACTATTTTAGTGCTACTCACTATTCTCGAGTTCGCTGTAGCCCTCATTCAGGCCTACGTCTTCACTCTGCTAGTAAGCCTATACTTACATGATAACAC +>Tamias_sibiricus_NC_025277 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTACA---ATAATAGGACTACCTATTGTTGTTCTTATTATTATATTCCCTAATATCTTATTTCCTAGCTCCAAC---CGACTAATCAATAATCGGTTAATCTCATTTCAACAATGACTAATTCAACTTGTACTAAAACAAATAATGACAATACATAACCAAAAAGGACGAACCTGATCTTTAATATTAATCTCACTTATTATATTTATTGGCTCAACAAACTTACTAGGACTACTTCCTCACTCATTTACTCCAACGACCCAACTATCAATAAACCTAGGAATAGCAATTCCTCTATGAGCTGGAGCAGTAATTACTGGCTTCCGTAACAAGACCAAAGCATCTTTAGCCCACTTCTTACCACAAGGAACTCCAATCCCTCTTATTCCCATACTTATTATTATTGAAACAATTAGCCTTTTTATTCAACCAATAGCCCTTGCCGTACGATTAACCGCCAACATTACAGCAGGACATCTTCTCATACACCTAATCGGAGGAGCAACTATAGTACTTACTTCA---ATTAGCCCTCCTACAGCAATAATTACATTTATTATCTTAATTTTACTTACAATCCTTGAATTTGCAGTAGCTCTAATTCAAGCCTATGTATTTACCCTTCTAGTTAGCCTATACTTACATGATAATACC +>Rusa_timorensis_isolate_CYTO_NC_020745 +------------TATGAACGAAAATTTATTTGCCTCTTTTATTGCCCCAAT---AATCCTAGGCCTTCCACTAGCTACCCTTATCGTTATGTTTCCTAGCCTATTATTTCCAACATCAAA---TCGTCTAGTAAATAATCGCCTTATTTCCCTCCAACAATGAATACTTCAACTTGTATCGAAACAAATAATAGGAATTCACAATGCCAAAGGACAAACATGAACACTAATACTCATGTCTCTAATCTTATTTATTGGATCCACAAATCTTCTGGGCTTATTACCCCACTCATTTACACCAACCACACAGTTATCAATAAACCTAGGCATAGCCATTCCCCTATGAGCAGGAGCCGTGATTACAGGTTTCCGCAATAAAACTAAAGCATCACTTGCTCACTTTCTTCCACAAGGAACTCCAACCCCATTAATTCCCATACTAGTTATCATCGAAACTATTAGTCTTTTTATTCAACCAATCGCCTTAGCCGTACGACTAACAGCTAATATTACTGCAGGACACCTACTAATTCACCTAATTGGAGGGGCTGCACTTGCACTAATAAG---TATCAGTACTACAATAGCTCTTATTACATTTATTATTCTAGTCCTACTCACAATCCTTGAGTTTGCAGTAGCTATAATTCAAGCCTACGTATTTACCCTTCTAGTTAGCCTTTACTTGCATGATAACAC +>Trachypithecus_cristatus_NC_023971 +------------ATGAACGAAAATTTATTTACCCCATTTACAACCCCAACA---CTCCTAAGTCTACCCGCTGTAGTTCCCATTATTTTATTTCCCACATTATTATTCCCAACCTCCAAA---CACCTTGTTAACAACCGACTAGTTACTATTCAACAAAATCTGACTCAACTTATCCTAAAACAAATTATAATGATTCATAATACAAAAGGGCGAGCTTGATCCCTAATACTAATGTCTCTAATCATTTTCATTGCTACAACCAACCTCCTCGGGCTATTACCTCACTCATTTACACCTACCGCCCAGCTGTCTATGAATTTGGCAATGGCAATCCCTCTATGGGCTGGTACAGTAATTACAGGCCTTCGCTTCAAAACCAAAAATTCCCTAGCCCATTTTTTACCACAAGGCACACCTACACTCCTTATCCCCATGCTAGTAATTATTGAAACTATCAGCTTATTTATTCAACCAGTAGCCCTAGCTGTACGCCTAACCGCTAATATCACAGCGGGCCATCTACTCATGCATCTAATCGGAAGTGCCGTACTAGCGCTATCAACC---ATTAATTTTCTTGCAACTTCACTAACCTTTATACTCCTGTTGCTACTAACAATTCTAGAAATTGCAGTTGCCCTAATTCAAGCCTATGTTTTCACGCTCCTGGTAAGCCTTTACTTACATGATAACACT +>Cebus_albifrons_NC_002763 +------------TAATGAACCAAAATCTATTTGCCTCTTTCAATATACCAA---TAATCCTGGGAATCCCCCTAGTAGCACTATTTATTTTATTTCCCACTATACTAATTACACCCTCTA---ACAACCTAAACAATAACCGATCCTCCTCCCTTCAACAATGACTAATCCAACTTGTACTAAAACAAATAATGACAAACCATACCACCAAAGGACAAACCTGATCCCTTATACTTTTAACCCTAATTACCTTTATTACCCTGAACAACCTTCTCGGAATTACACCCTACGCATTTACACCTACCACACAACTATCATTAAATCTAGGCATGGCAATTCCCCTATGAATAGCAACCGTACTTATAGGACTTCGATTTAAAACAAAAGCAACCCTTGCTCACCTCTTACCTCAAGGAACACCTATCCCACTCATCCCTATACTTATTATTATTGAGACTATCAGCCTCTTCATTCAACCTATGGCACTAGCCGTACGATTAACAGCCAACATCACAGCAGGCCACCTATTAATGCATCTACTAGGAGACACTATATTAATTCTTCTTT---CTATTTACCTCTCTTCCTCCGTAATCACCGTTATCGTTATTATTCTATTAATTACCCTAGAACTAGGCGTAGCCCTAATCCAAGCCTATGTATTCACACTCCTAGTAAGTCTCTATTTGCACAATAACT +>Mandrillus_sphinx_NC_021956 +------------AATGAACGAAAATCTATTTACCCTATTCTCAACTCCAAC---AGTGCTAGGTCAGCCCGCCACGATCCCTATTATCTTATTCCCTATACTACTGATTCCAACCTCCAA---ATACCTTATTAATAACCGACTAACCACCATCCAACAAAACCTAACCCAATTCACCCTAAAACAAATAATAATAACCCATAATACCAAGGGGCAAACTTGATCTCTAATACTAATATCTCTAATTATTTTCATCACCATGACTAACCTTCTAGGACTCCTACCCTACTCATTTACACCAACCACCCAACTTTCTATAAACCTAGCCATGGCAATCCCCCTATGAGCAGGTACAGTAGTCACAGGACTGCGCCTCAAAACCAAAAGCTCCCTAGCCCACCTTCTACCACAAGGCACACCCACACAACTCATTCCTATACTAGTAGTAATCGAAACTATTAGCCTACTTATTCAACCGGTAGCCCTAGCCGTACGACTAACCGCTAACATTACAGCTGGCCACCTGCTAATACACCTGACTGGAAACGCTGCACTAGCACTATCAAC---CATCAGCTCCCCTGCCACCCTCCTAACCTTTACGCTCCTAATACTATTAACCATCCTAGAAATTGCAGTAGCCCTAATCCAAGCCTACGTTTTTACACTCCTAATCAGCCTCTATTTACACAACAACAC +>Mus_musculus_musculus_NC_010339 +------------ATGAACGAAAATCTATTTGCCTCATTCATTACCCCAACA---ATAATAGGATTCCCAATCGTTGTAGCCATCATTATATTTCCTTCTATCCTATTCCCATCCTCAAAA---CGCCTAATCAACAACCGACTCCATTCTTTCCAACACTGACTAATTAAACTTATTATCAAACAAATAATGCTAATTCACACACCAAAAGGACGGACATGAACCCTAATAATTGTCTCCCTAATCATATTTATTGGATCAACAAATCTCCTAGGCCTTTTACCACATACATTTACACCCACTACCCAACTATCTATAAATCTAAGTATAGCCATTCCTCTATGAGCTGGAGCCGTAATTACAGGCTTCCGACACAAACTAAAAAGCTCACTCGCCCACTTCCTTCCACAAGGAACTCCAATCTCACTAATTCCAATACTTATTATTATTGAAACAATTAGCCTATTTATTCAACCAATGGCATTAGCAGTCCGGCTTACAGCTAACATTACCGCAGGACACTTATTAATACACCTAATCGGAGGAGCTACACTAGTACTAATAAAT---ATTAGCCCACCAACAGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTCGCAGTAGCATTAATTCAAGCCTACGTATTCACCCTCCTAGTAAGCCTATATCTACATGATAATACA +>Rusa_unicolor_swinhoei_NC_008414 +------------TAATGAACGAAAATTTATTTGCCTCTTTTATTGCCCCAA---TAATCCTAGGCCTTCCACTAGCTACCCTCATCGTTATGTTTCCTAGCCTATTATTTCCAACATCAA---ATCGTCTAGTAAATAATCGCCTTATTTCCCTCCAACAATGGATACTTCAACTTGTATCAAAACAAATAATAGGAATTCACAATGCCAAAGGACAAACATGAACACTAATACTCATATCTCTAATCTTATTTATTGGATCCACAAATCTTCTGGGCCTATTACCCCACTCATTTACACCAACCACACAGTTATCAATAAATCTAGGCATAGCCATTCCCCTATGAGCAGGAGCCGTAGTTACAGGTTTCCGCAATAAAACTAAAGCATCACTTGCTCACTTTCTTCCACAAGGAACTCCAACCCCATTAATTCCTATACTAGTTATCATCGAAACTATTAGTCTTTTTATTCAACCAATCGCCTTAGCCGTACGACTAACAGCTAATATTACTGCAGGACATCTACTAATTCACCTAATTGGAGGGGCTGCACTTGCACTAATAA---GTATCAGTACTACAATAGCTCTTATCACATTTATTATTCTAGTCCTACTCACAATCCTTGAGTTTGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTTCTAGTTAGCCTTTACTTGCATGACAACA +>Plecotus_auritus_NC_015484 +------------AATGAACGAAAATTTATTTGCCTCTTTCACTACCCCTAC---GATAATAGGCCTGCCTATTGTGATCTTCATTATCTTATTTCCCAGCATTCTTTTTCCATCAACAAT---ACGTTTAATCAATAATCGTTTAGTTACACTTCAACAGTGACTCATTCGTGTAACCACAAAACAAATAATAACGATTCATAACAAAAAGGGCAAGACTTGGACATTAATATTGATCTCACTAATTATATTTATTGGCTCTACAAACCTATTAGGTCTCTTACCTCACTCATTTACACCAACTACACAGCTATCAATAAATCTCGGAATGGCCATCCCTCTTTGAGCAGGTACTGTAATTTTAGGTTTTCGCTATAAAACAAAAGCATCTCTCGCACACTTCTTACCTCAGGGCACACCGCCGCTCCTAATTCCTATGTTAATTATTATTGAAACAATTAGTTTATTTATTCAACCTCTGGCACTGGCAGTACGACTTACAGCAAATATTACCGCAGGACATCTATTAATTCACTTAATCGGGGGCGCTACATTAGCTCTAATAAA---TATTAGCATAACCACAGCCTCTATTACATTTATTATTCTTGTATTGTTAACAGTATTAGAGTTCGCTGTTGCCCTTATTCAAGCCTACGTTTTCACTCTGCTAGTGAGCCTGTACCTACATGATAACAC +>Myospalax_psilurus_NC_026034 +------------ATGAACGAAAATCTATTTGCCTCTTTCTCTACCCCTACA---CTAATAGGCATCCCTATTGCCATTGCAATTATCATAATCCCAACAATCCTATTCTCCCACTCTAAC---CGCATCCACAATAATCGATTAGTGGCATTACAACAATGAGTTATCAAACTAATTATTAAACAAATAATGTCTATTCACTCACAAAAAGGACGTTCCTGAACACTTTTACTTATCTCACTAATCATTTTTATCGGCTCAACTAACCTTTTAGGCCTTCTACCACACACCTTCACCCCAACAACACAATTATCAATAAACCTAGGAATAGCTATCCCCCTTTGAGCTGGAACAGTATTACTAGGATTCCGTAACAAAACAAAATCTGCTCTAGCCCATTTCCTACCCCAAGGAACACCAATTCCCTTAATCCCCATACTAATTATCATTGAAACAATTAGCTTATTCATCCAGCCAATAGCCCTAGCCGTTCGATTAACAGCCAACATCACAGCAGGTCACCTACTTATCCACCTTATTGGTGGAGCAACTTTAGCCTTATTATCA---ATTAGTACGCCAACAGCCCTTATTACATTCTCTATTCTAACCCTTCTAACCATTCTAGAATTCGCTGTAGCACTTATCCAAGCCTACGTCTTTACCCTTCTAGTAAGCCTCTATTTACACGATAACACC +>Ovis_orientalis_breed_Asian_mouflon_NC_026063 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTA---TAATATTTGGCCTCCCCCTCGTTACCCTCATTGTTTTATTCCCTAGCCTATTATTTCCCACATCAA---ACCGACTAGTCAACAACCGCCTCATCTCCCTCCAACAGTGAATACTTCAATTAGTATCAAAACAAATAATGAGCATTCATAATACCAAAGGACAGACATGAGCATTAATGCTAATGTCCCTAATTTTATTTATTGGATCTACAAACCTACTAGGCCTCCTACCCCACTCATTTACACCAACTACACAACTATCAATAAACCTAGGCATGGCCATTCCTTTATGAGCAGGAGCTGTAATTACAGGCTTCCGCAACAAAACTAAAGCTTCACTCGCCCATTTCCTACCACAAGGGACACCCACCCCACTGATCCCAATACTAGTAATTATTGAAACCATCAGCCTATTTATTCAACCAGTAGCCCTTGCCGTACGATTAACAGCTAATATCACGGCAGGACACTTACTAATTCACCTAATTGGAGGAGCCACCCTTGCACTAATAA---GCATTAATACCACAACAGCACTCATCACATTCATTATCCTAATTTTACTAACAGTTCTCGAATTCGCAGTGGCTATAATTCAAGCCTATGTATTTACCCTTCTAGTTAGCTTATACCTGCATGATAACA +>Saiga_tatarica_isolate_KOLN_NC_020746 +------------CAATGAACGAAAATTTATTTGCCTCTTTCATTACCCCTA---TAATATTAGGCCTTCCTATCGTCACTCTCATCGTTCTATTCCCTAGCCTATTATTTCCAACATCAA---ATCGCCTAGTAAATAACCGTCTCATCTCTCTACAACAATGAATACTTCAACTTGTATCAAAACAAATAATAAGCATTCACAATCCTAAAGGACAAACATGAGCACTTATATTAATATCCCTAATTCTATTTATTGGATCAACAAATCTACTAGGTCTACTACCCCACTCCTTCACACCAACTACACAACTATCAATAAACCTAGGCATGGCTATTCCCCTATGAGCAGGAGCTGTAATTACGGGCTTTCGCAACAAAACCAAAGCATCACTCGCCCATTTTTTACCACAAGGAACACCAACCCCTTTAATCCCCATACTAGTAATCATCGAAACCATCAGTTTATTTATTCAACCAGTAGCCCTTGCAGTACGACTAACAGCTAACATTACAGCAGGACATCTACTGATTCACTTGATTGGAGGAGCTACACTAGCACTAATGA---GTATTAGCACTACAACAGCACTTATCACATTTATTATTTTAATTTTACTAACAATCCTCGAATTCGCAGTAGCTATAATTCAAGCCTATGTATTTACCCTTTTAGTTAGCCTATACCTACACGATAACA +>Hydropotes_inermis_NC_011821 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAAT---AATTTTAGGCCTCCCACTCGTTACCCTTATCGTTATTTTTCCCAGCCTACTATTTCCCACATCTAA---TCGTCTGATTAGTAACCGTCTTATTTCACTTCAACAATGAGTACTTCAACTTGTATCAAAACAAATAATAGGGATTCACAATACTAAAGGACAAACATGAACATTAATACTCATATCCCTGATTCTATTTATTGGATCAACGAACTTATTAGGCCTATTACCCCATTCATTCACACCAACCACACAACTATCAATAAATTTAGGCATAGCCATTCCCTTATGAGCAGGTGCTGTAATTACAGGCTTCCGTAATAAAACTAAAGCATCACTTGCTCATTTTCTCCCACAAGGAACACCCACCCCACTAATTCCAATACTAGTTATTATTGAAACTATTAGTCTATTTATTCAACCAATCGCCCTAGCCGTGCGATTAACAGCTAATATCACTGCAGGGCACCTGTTAATTCACCTAATTGGAGGAGCCACACTTGCACTAATAAG---TATTAGTACTACAATGGCCTTTATTACATTTATTATTCTGGTCTTACTCACAGTTCTTGAATTTGCAGTAGCTATAATTCAGGCTTACGTATTTACCCTTTTAGTTAGCCTCTACCTGCACGACAATAC +>Canis_lupus_laniger_NC_011218 +------------ATGAACGAAAATTTATTCGCCTCTTTCGCTGCCCCCTCA---ATAATAGGTCTCCCTATTGTGGTATTGATCGTCATATTCCCTTCCATTTTATTCCCAGCACCCAAT---CGCCTAATCAATAATCGGTTAATCTCCATTCAGCAATGACTAATTCAACTAACATCAAAACAAATACTAGCAATTCATAACCAAAAGGGACGAACCTGAGCTCTCATACTTATATCACTAATTCTATTCATTGGCTCAACCAATCTACTTGGACTACTACCTCACTCATTTACGCCCACAACACAACTCTCTATAAACCTCGGAATAGCAATCCCCCTATGAGCAGGGGCAGTAATTACCGGTTTCCGCTATAAGACCAAAGCATCTTTGGCACACTTTCTACCCCAAGGCACCCCCCTTCCCCTAATTCCAATACTAGTAATCATCGAAACTATTAGTCTATTTATTCAACCCATAGCTCTAGCCGTTCGACTAACCGCCAATATTACTGCAGGACACCTCCTAATCCATTTGATTGGAGGGGCTACCTTAGCTCTTATTAAT---ATTAGCGCGACCACAGCTTTTATCACTTTTATTATTTTAATCCTACTTACGATTCTAGAATTTGCTGTTGCCTTAATTCAAGCCTATGTTTTTACCTTACTAGTAAGTCTATACTTACATGACAACACT +>Leggadina_lakedownensis_NC_014696 +------------TAATGAACGAAAATCTATTTACCTCTTTCATAACCCCAA---CAGTAATAGGCCTACCAATCGTAATTACCATTATCATATTCCCATCAATTCTATTTCCATCATCAG---AACGACTAATCAACAACCGCCTCCACTCTTTCCAACATTGATTAATCAAACTTATCATCAAACAAATAATACTAATTCACACACCAAAAGGACGAACTTGAGCACTAATAATTGTCTCCCTAATTATATTTATTGGATCTACAAACCTTCTTGGATTACTACCCCACACCTTCACACCAACTACTCAACTATCAATAAATCTAAGTATAGCAATCCCCCTATGAGCAGGCGCAGTAATTCTAGGATTCCGTCATAAACTAAAAAACTCTTTAGCCCACTTTCTACCACAAGGAACCCCAATATCACTTATTCCAATACTAATCATTATCGAAACCATCAGTCTATTTATTCAACCTATAGCACTAGCAGTACGACTAACCGCTAATATCACTGCAGGACACCTATTAATCCACCTTATTGGAGGAGCAACCCTAGTACTTATAA---ACATCAGCCCACCAACAGCCACAATCACATTTATTATCCTACTATTATTAACAATATTAGAATTTGCCGTAGCCCTAATTCAAGCCTACGTATTCACCCTCTTAGTAAGCCTGTATTTACATGATAACA +>Rhinopithecus_roxellana_NC_008218 +------------AATGAACGAAAATTTATTTACCCCATTCATAGTCCCAAC---ATTCCTAGGCTTACCCGCTGTAGTCCCTATTATTCTATTTCCTACATTACTGTTTCCAACCTCCAA---GCACCTTATTACTAATCGACTAATTATTATCCAGCGAAATCTAGTCCAACTAATTATAAAACAAATGATAACTATTCATAGTACCAAGGGACAAACCTGATCCCTAATACTCATATCCCTAATTATTTTTATTGCTGCAACAAATCTTCTAGGACTCTTACCCCACTCATTTACCCCCACCACTCAACTGTCCATAAATCTAGCTATAGCAATTCCTCTGTGAGCAGGTACAGTAATTACAGGTCTTCGCTTCAAAACCAAAAACTCCTTAGCTCACTTTTTACCACAAGGCACACCCACACCTCTTATTCCCATATTAGTAGTTATCGAAACTATTAGCTTATTTATTCAACCAGTAGCCCTAGCCGTACGCCTAACCGCCAACATCACAGCAGGGCATCTGCTAATACACCTAATCGGAAGTGCCACACTAGCACTATTAAC---TGCTAGTTTCCTTGCAACCTCACTAACCTTAGTGCTCCTAGTATTATTAACAATCCTAGAAATAGCAGTTGCCCTAATCCAGGCCTACGTTTTTACACTCTTAGTAAGCCTTTATCTACATGATAATAC +>Rhinopithecus_bieti_1_RL_2012_NC_018058 +------------ATGAACGAAAATTTATTTACCCCATTTATAACCCCAACG---CTCCTAGGCTTACCCGCTGTAGTACCTATCATTCTATTCCCTACATTATTATTTCCAACCTCCAAG---CACCTTATTAGTAATCGACTAATTACTATCCAACAAAATCTAATCCAACTAATTATAAAACAAATAATAATAATTCACAATGCCAAAGGACAAACCTGATCCCTAATACTCATGTCCCTAATTATTTTTATTGCTACAACAAATCTTCTAGGACTCTTACCCCACTCATTTACCCCCACCACTCAACTGTCCATAAATCTAGCTATAGCAATTCCCCTGTGAGCAGGTACAGTAATTACAGGTCTTCGCTTCAAAACCAAAAACTCCCTAGCTCACTTTTTACCACAAGGCACACCTACACCTCTTATTCCCATATTAGTAGTTATCGAAACTATTAGCTTATTTATTCAACCAATAGCCCTAGCCGTACGCCTGACCGCCAACATCACAGCAGGACACCTACTAATACACCTAATCGGAAGTGCTACACTAGCACTATTAACT---GCTAGTTTCCTTGCAACCTCACTGACTTTAGTACTCCTAGTATTATTAACAATCCTAGAAATAGCAGTTGCCCTAATCCAGGCCTACGTTTTTACACTCTTAGTAAGCCTTTATCTACATGATAATACT +>Nomascus_leucogenys_NC_021957 +------------TAATGAACGAAAATCTATTCGCTTCATTCGCTGCCCCCA---CAATCCTAGACCTACCCGCCGCAGTACCAATTATTCTATTCCCCTCTCTACTAATTCCCACCTCCA---AGTATCTCATCAACAACCGACTAGTTACCACCCAACGGTGACTAATCCAGCTAACCTTAAAACAAATAATAACAATACACAATGCTAAGGGACGAACCTGATCCCTCATACTAATTTCCCTAATCACCTTCATTGCCACAACCAACCTACTAGGCCTCCTACCCCACTCATTCACACCAACCACCCAGCTATCCATAAACCTGGCCATAGCAATTCCCCTATGAGCAGGCACAGTAGCCACAGGTTTTCGTCTTAAAGCCAAAAACACCTTCGCCCACCTCCTACCCCAAGGCACACCTACACCTCTCATCCCCATACTAATTATCATTGAAACCATTAGTCTGTTTATTCAGCCCATAGCCCTAGCCGTACGCCTAACCGCAAATATCACAGCAGGTCACCTACTAATACACTTAATCGGGGCAGCCACATTAGCCCTATCAA---CCATTAGTCTATCCGCAACACCCATCATCTTCACAGTCCTAGCCCTATTGACAATCCTCGAAGTCGCCGTCGCTCTAATTCAAGCATATGTATTTACACTCCTGGTAAGCCTCTACCTGCACGATAACA +>Chiropotes_israelita_NC_024629 +------------AATGAACCAAAATCTATTCGCCTCTTTCAACATCCCCGT---CATCCTAGGTATTCCAATAGTTACGCTAGTAATTCTATTTCCCGTCATACTACTAATACCCTCTAA---CAACTTAATCAACAACCGACTATATTCTCTCCAACAATGATTGATTCAACTCACATTGAAACAAATGATAATTACTCATACTACAAAAGGACGAACTTGATCTCTTATGCTACTAACACTAATTACCTTTATTGCCCTAAATAACTTACTCGGACTAACACCCTATGCATTTACACCAACCACCCAACTATCAATAAATCTAGGTATAGCAATTCCTCTATGAACAGCCACCGTGCTTGTCGGACTTCGATTTAAAACAAAATCATCTTTAGCCCATCTCTTACCTCAAGGAACTCCTACCCCACTTATTCCTATTTTAATTATTATTGAAACAATTAGCCTCTTTATTCAACCAGTAGCATTGGCCGTACGATTAACAGCTAACATTACAGCAGGCCACCTACTAATACATTTACTTGGAAGCACTTCACTAACCCTGCTATC---CATTTATCTCTCCTCATCCTTAGTTACTATTATTGTTATTATTCTGCTGATTACCTTAGAACTAGGCGTAGCCCTAATTCAAGCATATGTCTTTACACTTCTAGTAAGCCTCTACTTACACAACAACAC +>Capra_falconeri_NC_020622 +------------ATGAACGAAAATCTATTTACCTCTTTTATTACCCCTATA---GTATTAGGCCTCCCCCTTGTTACCCTTATTATTTTATTTCCTAGCTTACTATTTCCCTCACCAAAC---CGACTAATTAACAACCGCCTCATCTCTCTCCAACAGTGGGCACTCCAACTTGCATCAAAACAAATAATAAGCATTCATAACACCAAAGGACAAACATGAACATTAATATTAATGTCCCTGATCTTATTTATTGGATCTACAAACCTATTAGGCCTCCTACCCCACTCATTTACACCAACTACACAACTATCAATAAACTTAGGCATGGCCATTCCCYTATGAGCAGGGGCCGTAATCACAGGTTTTCGCAACAAAACTAAAGCATCACTTGCCCATTTCCTACCACAAGGAACRCCCACMCCACTAATCCCAATGCTAGTAATTATTGAAACCATTAGCCTCTTTATTCAACCAATAGCCCTCGCCGTACGACTGACAGCCAACATCACAGCAGGACACTTATTAATTCACTTAATCGGAGGAGCCACCCTTGCACTAACAARC---ATCARTCCCACAACAGCACTCATTACATTCATTATTCTAATTCTACTAACAATTCTCGAATTCGCAGTAGCTATAATCCAAGCCTACGTATTTACTCTCCTAGTCAGCCTATACCTGCATGACAACACA +>Physeter_catodon_NC_002503 +------------TAATGAACCAAAATCTATTTACCTCTTTTATAACCCCAG---TAATACTAGGCATCCCCATCATCACCCTAATCATCATATTCCCAACTATCTTGTTCCCAGCACCAA---CCCGGCTAATTAACAACCGAACAATCTCTATCCAACAGTGATTGACCAAATTTCGATCGAAACAACTAATAATTACACACAACTCCAAGGGACAAACCTGATCCCTCCTACTTGTTTCACTTATTCTATTCATCACCTCTACCAATCTCCTCGGAATACTACCACACTCATTTACACCTACCACACAGCTCTCAATAAATATAGGAATAGCCGTTCCCCTATGAGCCGGCACTGTCATCATAGGCTTCCGAAACAAGACAAAAGCATCTCTAGCCCACTTCTTGCCCCAAGGCACACCCACCTTCCTTATCCCTATACTAGTAATTATCGAAACTATCAGCCTATTGATCCAACCAGTAGCACTAGCCGTACGGCTAACTGCCAATATCACAGCAGGCCACCTGTTAATACACCTAATCGGAATAGCCACCCTCGCACTAATAA---GCATCAGTCTATTCACAGCCTTCATCACATTCATCATTCTCACCCTCTTAACCATCCTTGAATTTGCCGTCGCCCTAATCCAAGCCTATGTTTTCACCCTCCTAGTAAGCCTGTACCTGCATGACAACA +>Uropsilus_soricipes_NC_023244 +------------CAATGAACGAAAATTTATTCGCCTCTTTCATTACCCCTA---CAATAATAGGACTACCCATTGTTGTATTAATTATTATATTTCCAAGCATTATATTTCCTTCTCCAA---ATCGACTAATCAACAACCGCATAATTTCTTTACAACAATGACTCATTCAACTGACTTCTAAACAAATAATAGGGATCCATAATATTAAAGGCCAAACCTGATCTCTTATACTGATATCATTAATTATATTTATTGGCTCAACCAATCTACTAGGCCTACTACCACACTCGTTTACCCCTACAACACAACTATCAATAAACTTGGGTATGGCTATTCCACTATGAGCAGGAACCGTAATTACAGGTTTCCGACATAAAACAAAAGCCTCCCTAGCACATTTCTTACCTCAAGGAACTCCACTTCCCCTTATTCCTATACTGATTATTATCGAAACTATTAGCTTATTTATTCAACCCATGGCATTAGCCGTACGACTAACTGCAAATATTACTGCTGGACACTTATTAATTCACCTTATTGGAGGAGCTACCCTAGCTCTAATAA---ATATTAGCCCAATTACTGCTGCAATTACATTTATTATTCTAGTTTTATTAACAATTCTAGAGTTCGCAGTAGCCCTCATTCAAGCTTACGTATTTACACTTCTAGTTAGTCTCTACTTACATGACAACA +>Macaca_nigra_NC_026120 +------------AATGAACGAAAACTTGTTTACCCCTTTCTCAGCCCCAAC---AATTTTAAATCAACCCGCTACAATCCCCATTATCCTATTCCCCACCCTACTAATCTTAACCCCCAA---GCACCCCATTAATAATCGACTAGCTACCATTCAACAAGACCTGACTCGATTCACCCTAAAACAAATAATAATAACTCACAACGCTAAAGGACAAACCTGATCCTTAATACTAACATCCCTAATCACCTTTATTGCCATAACAAACCTCCTAGGACTTATGCCCTACTCGTTCACACCAACTACCCAACTTTCCATAAATCTAGCTATAGCAATCCCCCTATGAGCAGCCACAGTAATAATGGGGCTTCGCTTTAAAACCAAAAACTCCCTAGCCCACCTCCTACCACAAGGCACACCCACACCTCTCATTCCCATGTTAGTAGCAATCGAAACTATCAGCCTACTCATTCAACCAGTAGCCCTAGCCGTACGATTAACCGCAAACATCACAGCCGGCCATCTGCTAATACACCTAATCGGAAACGCTATACTAGCACTATCAAC---CACCAACCTCTCCATAACTCTGCTAACCTCCACACTTCTGGTATTACTAACTACTCTAGAAATCGCAGTAGCCCTAATTCAAGCCTATGTCTTCGCACTCTTAATTAGCCTTTATCTACATAACAACAC +>Capra_nubiana_NC_020624 +------------ATGAACGAAAATCTATTTACCTCTTTTATTACCCCTATA---GCATTAGGCCTCCCCCTTGTTACCCTTATTATTTTATTTCCTAGCTTACTATTTCCCTCATCAAAT---CGACTAATTAACAACCGTCTCATCTCTCTCCAACAATGAGCACTCCAACTCATATCAAAACAAATAATAAGTATTCATAATACCAAAGGACAAACATGAACATTAATATTAATGTCCCTAATCCTATTTATTGGATCTACAAACCTATTAGGCCTTCTACCCCACTCATTTACACCAACTACACAACTATCAATAAACCTAGGCATAGCTATTCCCTTATGAGCAGGAGCCGTAATCACAGGATTTCGCAACAAAACTAAAACATCACTTGCCCATTTCCTACCACAAGGAACGCCCACACCACTAATCCCAGTGCTAGTGATTATTGAAACCATTAGCCTCTTTATCCAACCAATAGCCCTCGCCGTACGACTGACAGCCAACATCACAGCAGGACACTTGTTAATTCACTTAATCGGAGGAGCCACCCTTGCATTAACAAGC---ATCAGTCCCGCAACAGCACTCATTACATTCATTATTCTAATTCTACTAACAATTCTCGAATTCGCAGTAGCTATAATCCAAGCCTACGTATTTACTCTCCTAGTCAGCCTATACCTGCATGACAACACA +>Ursus_arctos_NC_003427 +------------TAATGAACGAAAATTTATTTACCTCTTTTATCACCCCAA---CGATAGTGGGAATTCCTATTGTACTTTTAATTATTATGTTTCCGAGCATTTTATTTCCTTCCCCCA---GTCGACTGATCGACAATCGCTTAGTATCTATTCAACAGTGACTAGTTCGGCTAACATCAAAACAAATATTATCCATTCATAGCCACAAAGGACAAACCTGGGCACTAATATTGATATCACTAATCCTATTTATTGGCTCAACTAATCTTCTGGGACTATTGCCGCACTCATTCACACCTACCACTCAGCTGTCAATGAACCTAGGAATGGCTATTCCCTTATGGGCAGGTACAGTTGCTACTGGATTCCGATACAAGACCAAAGCATCCTTGGCTCACTTTCTACCTCAAGGAACACCTTTCCCTCTAATCCCGATACTCGTAATTATTGAAACAATCAGCCTATTTATCCAACCTGTGGCCCTGGCCGTGCGACTAACCGCTAATATTACTGCAGGCCATTTGCTCATTCATTTAATTGGGGGAGCTACCTTGACTCTAACAA---GTATTAGTACTATTACAGCCTTTATCACCTTTACCGTTCTAGTGCTACTTACTATTCTCGAGTTCGCTGTAGCCCTCATTCAGGCCTACGTCTTCACCCTGCTAGTAAGCTTGTACCTACACGATAACA +>Procolobus_verus_NC_020666 +------------AATGAACGAAAATTTATTCACCTCTTTTATAGCCCCGAC---AATTCTAGGTTTGCCTGCTGCAATTCCCATCATTCTATTTCCCGCACTACTATTTCCAACTTCCAA---ACACCTCATTAACAACCGATTAATTACTATTCAACAAAATCTAATTCAACTAATTCTAAAACAAATTATAGTAATTCATAACACCAAGGGGCAAACTTGATCTTTAATACTTATATCCTTAATTACTTTTATTGCCACAACCAATCTCCTCGGACTCCTACCACACTCATTTACACCCACAGCCCAGCTATCTATAAATTTAGCTATAGCAATCCCCCTATGAGCCGGTACAGTAATTACAGGCTTTCGCTTCAAGACTAAAAGCTCTCTAGCTCACTTTTTACCGCAAGGAACACCCACACCCCTCATTCCCATACTAGTAATTATTGAAACCATCAGCTTATTTATTCAACCAGTGGCCTTAGCCGTACGCCTGACCGCCAACATTACAGCAGGCCACCTACTCATGCATCTGATTGGGAGCGCCGCACTAGCATTATCAGC---CATTAATTTCCCCGCAACTTCACTCATCCTAATCCTCCTAGTGCTATTAACAATTCTAGAAATTGCAGTTGCCCTAATTCAAGCCTACGTCTTTACACTCTTAGTAAGTCTTTATTTACATGATAACAC +>Antidorcas_marsupialis_NC_020678 +------------ATGAACGAAAATTTATTTGCCTCTTTCATTACCCCTATA---GTACTAGGCCTTCCTCTAGTCACCCTCATTGTCCTATTTCCCAGCTTATTATTTCCAACATCAAAC---CGACTAGTAAATAACCGCCTTATTTCTCTTCAACAATGAATCCTTCAACTCATTTCAAAACAAATAATAAGCATTCACAATCCTAAAGGACAGACATGAACACTAATACTTATATCCCTAATTCTATTTATTGGGTCAACAAACTTACTAGGTCTACTGCCTCACTCTTTTACACCAACCACACAATTATCAATAAACTTAGGCATGGCTATTCCCCTATGAGCAGGAGCTGTAATTACAGGCTTCCGCAACAAAACCAAAGCATCACTCGCCCATTTCCTACCACAAGGAACACCTACTCCTCTAATTCCCATATTAGTAATTATCGAAACTATCAGCCTATTTATTCAACCAATAGCTCTCGCAGTACGACTAACAGCCAATATTACAGCAGGACATCTATTAATTCACTTAATCGGAGGAGCTACACTAGCACTAATAAAC---ATTAGTACCACAACAGCTCTCATTACATTTATCATTCTAGTCTTATTAACAATTCTCGAATTTGCAGTAGCTATAATTCAAGCTTACGTATTTACTCTTCTAGTTAGCCTATACCTACACGATAATACA +>Murina_leucogaster_NC_025949 +------------TAATGAACGAAAATTTATTTGCCTCTTTTATTACCCCTA---CAATAATAGGTCTACCTATTGTTATACTAATTATCATATTCCCAAGCATGTTGTTTCCATCAGCAA---CACGATTAATCAATAATCGTCTCGTCTCTATCCAACAATGACTAGTCCGACTAGCAACGAAGCAAATAATGGCTATCCATAGCAAAAAGGGTCAGACCTGGGCACTCATGTTGATATCATTAATAATATTCATTGGCTCAACAAACCTATTAGGCCTCTTACCCCACTCATTTACACCAACTACCCAATTATCAATAAACCTAGGTATGGCCATCCCCCTCTGAGCAGGTGCTGTAATCCTAGGCTTTCGCCATAAGACAAAACTGTCTCTGGCCCACTTCCTACCGCAAGGCACACCACTACCCCTTATTCCAATACTAGTGATTATTGAGACAATTAGTTTATTTATTCAACCCATAGCACTAGCAGTTCGACTCACAGCAAACATCACCGCAGGACACCTGCTTATTCACTTGATTGGAAGCGCCGCTTTAGCATTAATAG---ATATTAATATGGCCACTGCTTTCATTACATTCCTAATCTTAGTGTTACTCACAGTACTAGAATTTGCCGTAGCACTAATTCAAGCATACGTTTTCACTTTATTAGTAAGCCTCTATCTACATGATAACA +>Odocoileus_virginianus_NC_015247 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAAT---AATTCTAGGCCTTCCACTCGCCACCCTTATCGTTATTTTTCCTAGCCTGCTATTCCCAACATCAAA---TCGTCTAGTAAATAACCGTCTTATTTCTCTCCAACAATGAGTAATTCAACTCGTATCAAAACAAATAATAGGAATTCACAATACCAAAGGACAGACATGAACATTAATATTAATATCCCTAATTATATTCATTGGATCAACCAACCTATTAGGTCTATTGCCTCACTCATTCACACCAACCACACAACTGTCAATGAATTTAGGAATAGCTATTCCCCTATGAGCAGGAACCGTAATCACAGGCTTCCGCAATAAAACCAAAGCATCACTTGCCCATTTTCTTCCACAAGGAACACCCACTCYATTAATCCCTATACTAGTTATCATTGAAACTATCAGCCTTTTTATTCAACCAATTGCCCTGGCTGTACGATTAACAGCCAATATCACCGCAGGACACCTGTTAATTCACCTAATCGGAGGGGCCACACTTGCATTAATGAG---TATTAGCACTACAATAGCCCTCACTACATTTATTATTCTAGTTCTGCTCACAGTTCTTGAATTTGCAGTGGCTATGATTCAGGCCTATGTATTYACCCTTCTAGTAAGCCTCTACCTGCATGACAACAC +>Petaurista_alborufus_NC_023922 +------------ATGAACGAAAATTTATTCGCCTCTTTCATTACCCCTACA---CTAATAGGTCTACCCATTATTATCCTAATTATTTCGTTCCCCAATGTTCTATTTCCCTCACCAAAC---CGACTAGTAAACAATCGACTAGTGTCCTTTCAGCAATGACTTATTCAACTTGTACTTAAACAAATAATGACAATGCATAACCTAAAGGGACGAACCTGATCCCTAATACTCATCTCCCTTATCATATTTATTGGCTCAACCAACCTACTAGGGCTCCTACCCCACTCATTTACACCCACTACACAACTATCTATAAACCTTGGCATAGCAATTCCCCTGTGAGCAGGTGCAGTAATCACCGGATTTCGTCACAAAACTAAGGCATCTCTTGCCCATTTTCTTCCACAAGGAACCCCCATTCCCCTTATCCCCATACTCGTCATTATCGAAACAATTAGTCTCTTTATTCAACCAATAGCCCTGGCCGTCCGTCTCACTGCCAATATCACAGCAGGCCATCTACTCATACATTTAATTGGAGGGGCTACCCTTATCTTAACCTCT---ATCAGCCCTCCTACCGCAATAATCACCTTTATTATTCTAATCTTATTAACTATTCTTGAGTTCGCCGTAGCACTAATTCAAGCATATGTATTTACACTTCTCGTAAGCCTTTACTTACACGATAATACT +>Ornithorhynchus_anatinus_NC_000891 +------------TATGAACGAAAATTTATTTGCCCCCTTCATTACTCCTAC---AGTCCTAGGTATTTCAGTTCTACCTCTAATTATGATTTTCCCATGTCTACTATTCTCAACTTCCAA---CCGCTGAGTTCCTAACCGCCTGATTGCTCTTCAACTTTGATTAGTTCGACTTATCACTAAACAAATGATAATAATGCATAATAAACAAGGCCGAATATGAACACTAATATTAATTACATTAATTATCTTTATTGCCTCAACAAATCTTTTAGGACTTTTACCATACACCTTTACTCCTACAACCCAATTGTCAATAAACATAGGAATGGCTATCCCCCTATGAATAGGGACAGTACTAATAGGTTTTCGTAATAAGCCCAAGGCTTCCTTAGCCCATTTCCTCCCACAAGGAACTCCAACCCCTCTTATCCCCATATTAATTATTATCGAAACTATCAGTCTCTTTATTCAACCTCTAGCACTTGCTGTACGACTAACTGCTAATATTACAGCGGGCCATCTACTGATTCACCTTATTGGATCAGCTACCCTAGCCCTGTCCTC---AATCAGCCTAACAGTATCAACCATTACATTTACTATTCTTTTTCTTCTAACAATCCTAGAATTTGCAGTAGCCCTCATTCAAGCATATGTTTTTACACTACTAGTGAGCCTGTATTTACATGATAATAC +>Rhinoceros_unicornis_NC_001779 +------------ATGAACGAAAATTTATTCGCCTCTTTCACTACCCCAACA---ATAATAGGACTACCTATTGTTATCCTAATTATTATATCCCCCAGCATCATATTCCCTTCACCTAAT---CGACTAATCAACAACCGCCTAATCTCAATTCAACAATGACTACTTCAATTAACATCAAAACAAATAATATCTACCCATAATAACAAAGGTCAAACCTGAACACTAATACTTATATCCCTCATCCTATTTATTGGCTCAACCAATCTACTAGGCCTGTTACCCCACTCATTTACACCTACCACTCAATTATCAATAAACCTAGGCATGGCTATTCCCCTATGAGCAGGAACAGTGCTCACAGGCTTCCGTCATAAAACCAAAGCATCCCTAGCCCACTTCCTCCCACAAGGAACACCCACTTTTCTTATCCCAATACTAGTAATTATCGAAACCATCAGCCTATTTATTCAACCCGTAGCCCTAGCCGTACGATTAACAGCCAACATTACAGCAGGACATCTTCTAATACACTTAATCGGAGGGGCAACACTAGCCCTAATAAAC---ATTAGCCCAACTACATCCTTCATCACATTCATCACTCTCGTCCTACTTACCATTCTCGAATTCGCTGTAGCTTTAATTCAAGCCTACGTATTCACCCTCTTAGTAAGCCTGTACTTACACGACAACACC +>Panthera_onca_NC_022842 +------------TAATGAACGAAAATCTATTCACCTCTTTCACTACCCCAA---CAATAATAGGACTACCCATTGTCATACTAATTATTATATTCCCCAGTATTCTATTCCCCTCGCCCA---GTCGACTAATTAACAATCGTCTAATCTCACTCCAACAGTGATTAGTACAATTAACATCAAAACAAATACTAGCCATTCACAACCACAAAGGGCAAACTTGGGCTCTAATACTCATATCTCTCATTCTATTCATTGGATCAACAAACCTGTTGGGCCTACTGCCCCACTCATTTACCCCAACTACCCAATTATCAATAAACTTAGGAATAGCTATTCCCCTATGAGCCGGCACCGTAATTACTGGGTTTCGCCACAAAACTAAAGCATCCCTAGCCCACTTTCTACCACAAGGGACACCGATCCCCCTGATCCCCATGCTTGTAATTATTGAAACTATTAGCCTTTTCATCCAACCCGTGGCTCTGGCCGTACGACTTACAGCCAACATTACTGCGGGCCACTTATTAATGCACTTAATCGGAGGAGCTGCTCTGGCCCTAATAA---ACATTAGTACCTCTATTGCTCTAATTACCTTTATTATCCTTATCCTACTGACAGTCCTTGAATTCGCTGTAGCCCTAATCCAAGCTTATGTCTTTACCCTACTTGTAAGCCTGTATTTACATGACAACA +>Eremitalpa_granti_NC_010304 +------------AATGAACGAAAATTTATTTGCCTCATTCATCACTCCCAC---ATTAATAGGTCTTCCCATTGTCCTATTAATTATTGCTTTCCCTACCATTCTATATCCCTCATCTAA---ACGACTTATTAGCAATCGCCTAGTCTCTTTCCAACGGTGACTAATCTCCTTAATCCTTAAACAAATAATAGCTATTCATACTTCCAAAGGCCGAACTTGATCATTAATATTAATATCATTAATTTTATTTATTGGGTCTACTAACCTATTAGGGCTTCTACCACATTCTTTCACACCTACTACCCAATTATCTATAAATTTAGGAATAGCAATTCCCCTATGAGCTGGAGCTGTAATTATAGGATTTCGACATAAAACCAAAGCTTCCTTAGCACATTTCCTACCTCAAGGAACACCTATTCCATCAATCCCAATACTAATTATCATCGAAACAATTAGTCTATTTATTCAACCAACGGCCCTTTGCGTGCGGCTAACAGCCAACATTACCGCAGGACACTTACTAATCCACCTAATCGGAGGAGCTACTCTAGTATTAATATC---TATCAGTGTACCTACTGCAATTATCACCTTTATTATTCTACTCCTCCTTACAATATTAGAATTCGCAGTCGCTCTAATTCAAGCTTACGTCTTCACCCTACTTGTAAGCCTTCATTTACATGACAACAC +>Monachus_schauinslandi_NC_008421 +------------ATGAACGAAAATTTATTCGCTTCTTTCGCTACCCCTACA---ATAATAGGCCTCCCCATCGTAATTCTCATTACCCTGTTTCCAAGTATCCTACTCCCCTCTCCCGAT---CGATTAATTAATAACCGCCTTATTTCTATTCAACAATGACTAATTCAACTAACATCAAAGCAAATATTGTCAGTCCATAACTACAAAGGACAAACATGGGCACTCATACTTATATCACTCATTCTATTCATTGGATCTACTAATCTTCTAGGTCTCTTACCACACTCATTTACTCCCACTACTCAACTATCCATAAATCTAGGCATAGCCATTCCCCTATGAGCAGGAACAGTCATTATAGGATTCCGACACAAAATAAAAACATCTCTAGCTCACTTCCTACCTCAAGGAACACCTCTACTTCTTATCCCAATACTAGTAATCATTGAAACTATTAGTCTATTAATTCAGCCCATAGCCCTAGCTGTACGACTAACAGCTAACATCACTGCAGGCCACCTACTAATTCACCTAATCGGAGGGGCTACTCTTATCCTTATAGAC---ATCAACACTGCTACAGCCTCAATCACCTTTATTATCCTCATACTACTTACCATCCTCGAGTTCGCTGTAGCCCTTATCCAAGCCTATGTCTTCACACTATTAGTCAGCTTGTATCTACACGATAATACC +>Pipistrellus_abramus_NC_005436 +------------TAATGAACGAAAATTTATTTGCCTCTTTCATTACCCCTA---CATTAATAGGTCTCCCTATTGTTGTTGTTATTATTACACTCCCTGGTATTTTTTTCCCATCATCAA---ACCGCCTAATTAATAACCGTCTAGTTGCAGTACAAAAATGACTCATTCGTCTTATTACAAAACAAATAATGGCTATTCACAGCAAAAAAGGCCAAACTTGAGCCTTAATACTAATATCACTAATTATATTTATTGGATCGACAAATCTGATTGGACTTCTACCCCACTCATTCACCCCAACCACTCAATTATCAATAAATCTTGGTATAGCCATTCCTCTTTGAGCCGGTACTGTAATTTTAGGGTTTCGCCATAAAACTAAGGCATCCCTAGCACATTTTCTCCCCCAAGGCACACCATTACCTTTAATTCCTATACTAGTAATCATTGAAACAATTAGTTTATTTATTCAACCAATGGCACTAGCAGTTCGACTAACAGCAAACATTACCGCAGGACACTTATTAATTCATCTAATTGGAGGTGCCACATTAGCTTTAATAA---ATATTAGTATAACTACTGCCTTTATCACATTTATTATTCTTGTACTGTTAACAATATTAGAATTCGCTGTTGCCCTAATCCAAGCTTATGTATTCACCCTACTAGTAAGTCTCTATTTACATGATAATG +>Vombatus_ursinus_NC_003322 +------------AATGAACGAAAATCTATTTGCCCCATTCATCACTCCTAC---AATCATAGGTATTACAACATTACCAATTATTATAATCTTTCCATGTATTATTTTATCAACCCCAAA---ACGCTGACTCCCTAATCGTATCCAAACGCTACAAATCTGACTAATCCGACAAATCACAAAACAAATACTATCAATGCACAATACACGAGGTCGAACCTGAGCTCTAATACTAATGTCCCTTATTCTCTTCATCGCATCCACTAATCTCCTAGGTCTACTCCCATACTCTTTTACTCCCACAACACAACTTGCCATAAACATTGGCATGGCCATCCCACTATGATTAGCCACCGTAATCATAGGCTTTCGTAATAAACCAAAAGTATCTTTAGCCCACTTCCTACCACAAGGTACACCCACCCCTCTTATCCCAATACTTATTATCATCGAGACAATTAGCCTTTTCATCCAACCTCTAGCCCTCGCAGTACGACTAACAGCCAACATTACCGCAGGACACCTACTCATTCACCTAATCGGTTCCGCTACATTAGCCCTATCCTC---CATTAGCATAACCGTATCAACTATCACATTTACAATCCTCTTCTTATTAACTATCCTAGAATTAGCTGTAGCTATAATCCAAGCCTACGTTTTCACACTTCTAGTAAGCCTATACCTACATGACAACTC +>Prionailurus_bengalensis_euptilurus_NC_016189 +------------ATGAACGAAAATCTATTCGCCTCTTTCACTACCCCAACA---ATAATAGGACTACCTATTGTTATCTTAATTATTATATTTCCAAGTATTCTATTTCCTTCACCCAAT---CGACTAATTAATAACCGCCTAGTCTCACTACAACAATGACTGGTGCAACTAACATCAAAACAAATACTGGCCATCCATAATCACAAAGGACAAACCTGAGCCCTAATACTAATATCCCTTATCTTATTTATTGGGTCAACAAATTTACTAGGCTTACTGCCCCACTCATTCACCCCAACTACCCAGTTGTCAATAAATTTAGGAATAGCCATCCCACTATGGGCTGGCACTGTAATTACTGGGTTTCGCCACAAAACTAAAGCATCTCTGGCCCATTTCTTACCGCAAGGAACACCTATTCCCTTAATTCCTATGCTTGTAATCATCGAAACTATTAGTCTCTTTATCCAACCTATAGCCTTGGCCGTACGACTCACAGCCAACATCACCGCAGGCCACTTACTAATACACTTAATTGGAGGAGCCGCTCTAGCCCTAGCAAAC---ATCAGCACCTCTATTGCTTTAATTACTTTTACTATCCTTATCTTACTGACGATCCTTGAATTTGCCGTAGCCCTAATCCAAGCCTACGTTTTTACCTTACTAGTAAGCCTCTATCTACATGATAACACT +>Jaculus_jaculus_NC_005314 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAA---CACTCATAGGCCTTCCCGTAATTATTCTTATCGTTGCAATACCCAATATTTTTATCCCTTCTTCAA---ACCGACTCCTAACAAACCGAGTCTTAACCCTGCAACGATGACTAATTCAACTGATTCTAAAACAAATAATGGCAATACACAATAACAAAGGACGCTCCTGATCTCTTATATTGATCTCACTTATCATCTTTATTGGGTCTACTAACCTTCTGGGTCTATCCCCTCATACCTTCACGCCTACAACTCAACTGTCGATAAATCTAGGTATAGCTATCCCGTTATGAGCCGGAGCAGTCATCCTAGGCTTCCGACACAAAACCAAATCATCTCTAGCCCATTTTCTTCCTCAAGGCACTCCAGTTCCTCTGATTCCTATACTAATCATTATCGAAACCATTAGCCTATTTATCCAACCAATAGCCTTAGCCGTACGGCTTACTGCTAATATCACGGCAGGTCACCTCCTAATTCATCTGATCGGCGGGGCAACCCTAGCTCTCCTAT---CTATTAGCGTTCCCACCGCATTAGTAACCCTAATTATCTTAATCCTCCTCACCATTCTTGAATTTGCCGTGGCCCTCATCCAAGCTTATGTATTCACCCTCCTAGTAAGCCTCTATTTACACGATAATG +>Odocoileus_hemionus_isolate_T1766_NC_020729 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAAT---AATTCTAGGCCTTCCACTCGCCACCCTTATCGTTATTTTTCCTAGCCTGCTATTCCCAACATCAAA---TCGTCTAGTTAATAACCGTCTTATTTCTCTCCAACAATGAGCAATTCAACTCGTATCAAAACAAATAATAGGAATTCACAATACTAAAGGACAGACATGAGCATTAATATTAATATCCCTAATTATATTCATTGGATCAACCAACCTATTGGGTCTATTGCCTCACTCATTCACACCAACCACACAACTGTCAATGAATTTAGGAATAGCTATTCCCCTATGAGCAGGAACCGTAATCACAGGCTTCCGCAATAAAACCAAAGCATCACTTGCCCATTTTCTTCCACAAGGAACACCCACTCCATTAATCCCTATACTAGTTATCATTGAAACCATCAGCCTTTTTATTCAACCAATTGCCCTAGCTGTACGATTAACAGCCAATATCACCGCAGGACACCTGTTAATTCACCTAATCGGAGGGGCCACACTTGCATTAATGAG---TATTAGCACTACAATAGCCCTCACTACATTTATTATTCTAGTTCTGCTCACAGTTCTTGAATTTGCAGTGGCTATAATTCAGGCCTATGTATTCACCCTTCTAGTAAGCCTCTACCTGCATGACAACAC +>Ailuropoda_melanoleuca_NC_009492 +------------ATGAACGAAAATCTGTTCGCCTCTTTTACTACCCCAATG---ATAATAGGAGTACCAATTGTGGTTCTGATTATTATTTTCCCAAGTATCTTATTTCCCTCACCTAAT---CGATTAATCAATAACCGCCTAGCTACTGTCCAACAATGATTAATTCAATTAGTATCTAAGCATATACTGTCTATTCACAATTATAAAGGACAAACCTGAGCGCTAATACTAATGTCATTAATTTTATTTATTGGCTCAACTAACCTTTTAGGCCTATTACCACATTCATTCACACCTACTACACAACTATCAATAAATTTAGGAATGGCCATTCCTCTGTGAGCAGGTACAGTAGTTATAGGATTTCGACACAAAACTAAGGCATCTCTGGCCCACTTTCTACCCCAAGGAACACCTCTTCCTCTGATCCCAATGTTAGTAATTATCGAGACAATTAGTCTGTTTATTCAACCTGTGGCCCTAGCTGTACGACTGACCGCTAATATTACTGCAGGCCATCTACTTATTCATTTAATCGGAGGGGCTACCCTAGTTTTAATAAAC---ATTAACCCTGTAACAGCCCTAATTACCTTTATTATTCTTATTCTACTTACTATTCTCGAATTAGCTGTAGCTCTTATCCAAGCCTATGTTTTCACCCTACTAGTTAGTCTATACTTACATGATAATACC +>Cheirogaleus_medius_NC_021945 +------------TAATGAACGAAAATTTATTCGCCTCTTTCACTACCCCAA---CCATCATAGGCATTCCTATTGTAATTCTTATTATTTTAACTCCCAGTATTTTCTTCCCCTCTTCAC---CCCACCTTCTCGGCAACCGACTAATATCTCTTCAACAATGACTTGTCCAACTCGTATTAAAACAATTAATAGCAATCCACAATATCAAAGGGCGAACCTGATCCCTCATACTAATCTCACTGATTCTATTTATTGGATCTACCAATTTACTAGGCCTGTTACCCCACTCATTTACTCCTACCACACAATTATCAATAAATCTAGGAATAGCCATTCCCCTATGAGCAGCTACGGTTATTATAGGCTTTCGACACAAAACAAAAAAATCCTTAGCCCATTTCCTCCCACAAGGAACACCCATTCCCCTCATTCCTATACTAGTAATTATCGAAACCATTAGTCTTTTTATTCAACCTATAGCATTAGCCGTACGATTGACAGCTAATATTACTGCAGGCCACCTTCTTATACACTTAATCGGAGGAGCTACCATAGCATTAACCT---CCATTAGCCCTACCATTTCCTCAATCACATTTACTATTTTAATACTCCTTACAGTCCTTGAGTTTGCCGTTGCCCTCATTCAAGCCTATGTGTTTACCCTCTTAGTAAGCCTTTATTTACATGACAACG +>Rattus_norvegicus_strain_Wistar_AC_000022 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCCAC---AATAATAGGTCTACCAATTGTTGTGACCATTATTATGTTCCCATCAATTCTATTCCCATCATCAGA---ACGCCTAATCAGCAACCGACTACACTCATTTCAACACTGACTAATCAAACTTATCATCAAACAAATAATGTTAATTCACACACCAAAAGGACGAACCTGAGCCCTAATAATTGTATCCCTAATTATATTTATTGGCTCAACCAACCTTCTAGGGCTTCTTCCCCATACATTTACCCCTACCACTCAGCTATCTATAGACCTAAGCATAGCCATCCCCCTATGAGCAGGAGCCGTAATTCTAGGTTTCCGACACAAACTAAAAAATTCTTTAGCCCACTTCTCACCGCAAGGAACCCCCATCTCACTAATTCCCATACTAATCATCATCGAAACTATCAGCCTATTTATTCAACCGATAGCACTAGCAGTACGACTAACAGCAAACATTACAGCAGGCCATCTATTAATGCATCTAATCGGAGGAGCTACCCTAGTACTTATAGA---CATCAGCCCACCAACCGCTACAATTACATTTATTATTCTACTTCTACTTACAGTACTTGAATTTGCCGTAGCCTTAATTCAAGCCTATGTATTCACCCTTCTAGTCAGCCTGTACCTACATGATAACAC +>Sus_scrofa_taiwanensis_NC_014692 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTGCCCCTACG---ATAATAGGACTACCTATTGTCACCTTAATTATTATATTCCCAAGCTTACTATTCCCAACACCCAAA---CGACTCATTAATAACCGCACAATCTCGATCCAACAATGATTAATCCAACTAACATCCAAACAAATAATAGCTATTCACAACCAAAAAGGCCAAACCTGATCACTAATACTTATATCTCTAATTATATTCATTGGCTCAACAAACATCCTAGGCCTACTACCACACTCATTCACACCCACCACACAACTATCAATAAACCTGGGTATAGCAATCCCCCTATGATCAGCAACCGTATTCACAGGATTCCGCCATAAAACCAAAACATCACTAGCCCACTTTCTACCACAAGGAACACCCGCCCCATTAATTCCTATGCTCGTAATTATTGAAACTATTAGCCTATTTATTCAACCAGTAGCCCTAGCCGTACGACTGACAGCCAACATTACAGCAGGGCACCTATTAATTCATCTAATTGGAGGGGCCACATTAGCACTACTCAAC---ATCAGCACTATAACAGCTTTTATCACATTTACTATCCTCATCCTATTAACTATTCTTGAATTTGCAGTAGCTCTGATCCAAGCTTATGTGTTTACACTGCTAGTAAGCTTATACCTACACGACAATACA +>Myotis_formosus_NC_015828 +------------TAATGAACGAAAATTTATTTGCCTCTTTCATTACCCCAA---CAATAATAGGACTACCTATTGTTGCACTTATTATTATATTCCCAAGTTTACTATTCCCATCAACAG---CACGACTAATCAACAACCGTTTAATCTCAATTCAACAATGACTAATTCGTATAACAACAAAACAAATAATGGCTATTCATAGCAAGAAAGGCCAAACCTGAGCACTTATATTAATTTCATTAATTATATTTATTGGTTCAACAAACCTAGTAGGCCTTCTACCCCACTCCTTTACCCCAACCACACAACTATCTATAAATCTAGGCATAGCTATTCCCCTGTGAGCCGGTACAGTTATTTTGGGCTTCCGCTACAAAACAAAAGCATCTTTAGCACATTTTTTACCCCAAGGAACACCACTGCCCCTAATTCCTATGCTAGTAATTATTGAAACAATTAGCCTATTTATTCAACCAATAGCACTAGCCGTGCGACTTACAGCAAACATCACCGCAGGACACTTACTCATTCATCTAATTGGAGGAGCTACCCTAGCACTAATAA---ATATTAGCATAACTACCGCTTTTATTACATTTATTATCTTGGTGCTGTTAACAGTATTAGAATTTGCCGTAGCCCTAATTCAAGCATATGTTTTCACCTTACTAGTTAGCCTCTATTTACATGATAATG +>Marmota_himalayana_NC_018367 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTAC---GTTAGTAGGTTTTCCTATTGTCCTTTTTATTATTATATTCCCCAACTTACTCTTCCCCTCCCCTAC---TCGACTAGTAAACAACCGTCTAGTATCATTTCAACAATGGCTAATTCAACTTGTACTAAAACAAATAATGATTATACATAACCCAAAAGGACGTACCTGATCCCTAATACTAGTTTCACTAATTATATTTATTGGCTCAACTAATCTCCTAGGTCTATTACCCCACTCTTTTACTCCAACTACCCAGCTATCAATAAACTTAGGAATAGCTGTGCCTCTATGAGCAGGAGCAGTAATCACTGGATTTCGTCACAAAACTAAAGCATCATTAGCCCACTTTCTCCCACAAGGAACCCCAATCCTACTTATTCCTATGCTCATTATTATCGAAACAATTAGTCTTTTTATTCAACCTATAGCATTAGCCGTGCGACTAACAGCTAATATTACAGCCGGCCATCTTCTCATACATTTAATCGGAGGAGCAACCCTTATACTAACATC---CATTAGCCCTCCCACAGCCATTTTAACCTTTATTATTCTTGTATTACTAACAATACTTGAATTTGCAGTCGCATTAATTCAAGCCTACGTCTTCACTCTCCTAGTAAGCTTATATTTACATGATAATAC +>Lipotes_vexillifer_NC_007629 +------------TTATGAACCAAAATCTATTTACCCCTTTCATAACCCCAT---TTATACTAGGCATCCCCATTACTACTCTAATCATTATATTACCAGCCATACTATTTCCATCACCAA---ACCGATTAACTAATAATCGCCTAATCTCCATCCAACAGTGATTAACTAAGACAGTATTAAAACAACTAATAAACATACATAACCCTAAAGGACAATCTTGATCCCTAATACTCATCTCACTTCTTCTATTCATTGCCTCCACAAACTTACTGGGAATATTACCCCATTCATTCACACCCACCACCCAACTCTCAATAAATCTAGGAATAGCCATCCCCCTCTGAACTGGTACTGTCCTCATAGGCCTCCGCCACAAAACAAAAACATCCCTGGCCCACCTCTTACCACAAGGCACACCCACCTTCCTAATCCCTATATTAGTAGTCATTGAAACTATCAGCCTATTCATTCAACCAATAGCACTAGCTGTACGACTAACCGCCAACATTACAGCAGGACACCTACTACTACACTTAATCGGAAGCGCAATCCTTGCATTAGCAA---ATATTAATACACTCGCAGCCTTCACCACATTTATTATCCTAACTTTATTAGTCATTCTCGAACTCGCCGTCGCCTTAATCCAAGCCTACGTATTTACCCTATTAGTAAGCCTATACCTACACGACAACA +>Otolemur_crassicaudatus_NC_012762 +------------AATGAACCAAAACCTATTTGCCTCTTTCGCTACCCCTAC---AATAATAGGCCTTCCTATTATCACCTTAATCATCATGTTCCCTTACACCCTCTTCCCCACTCCAAC---ACGATTACTCAACAACCGATTAACATCACTACAACAATGATTAGCCCACTTAATCCTAAAACAACTTATAATCACCCATAACACAAAAGGTCGAACATGGTCACTAATACTCGTCTCACTAATTATATTTATTGGGTCAACTAACCTCCTCGGTCTACTCCCCCACACCTTCACTCCTACCACGCAGCTATCAATAAACCTAGGCATGGCTATTCCACTATGAGCGGCCACAGTATTTACTGGGTTTCGACACAAAACAAAAGCATCACTTGCCCACTTCCTACCACAAGGGACTCCCCCTCCCCTCATTCCCATGCTAATTCTCATTGAGACTATCAGCCTTTTCATTCAACCAGTAGCCCTAGCTGTACGATTAACCGCCAATATTACGGCAGGCCATCTCCTCATACATTTAATTGGAGGAGCTACACTAGCCCTCACATC---AATCAGCCCAGCCGCAGCCTCGATCACATTTATTATCCTAGCCCTACTCTCAGCACTAGAACTAGCAGTTGCTCTCATTCAAGCATACGTATTCACACTACTAGTTAGCCTTTACTTACATGACAACAC +>Aotus_lemurinus_NC_019799 +------------ATGAACCAAAATTTATTTACCTCTTTCAACGTACCAGTA---ATCTTAGGAATCCCCTTAGTAGTATTAATTATTTTATTCCCTACCACACTAATTATGCCCTCCAAC---AAGCTAATCAACAACCGACTCTCTTCTCTTCAACAATGATTAGTTCAACTTACACTAAAACAAATAATAATAGTTCATACCAACAAAGGACGAACATGATCCCTTATACTCTTAGCCCTAATCTCCTTCATTGCTCTAAATAACCTCCTTGGACTTACACCCTATGCATTTACACCTACTACTCAACTATCAATGAACCTAGGCATAGCAATTCCCCTATGGGCAGCAACCGTATTTATAGGACTTCGATTCAAAACAAAGGCGTCCCTTGCCCACTTCCTGCCCCAAGGAACACCTGTCCCACTTATCCCAATACTAATCATTATTGAAACAATTAGCCTGTTTATCCAACCAATAGCACTAGCCGTACGATTAACAGCCAATATTACAGCAGGCCACCTACTAATACATTTGCTAGGGGACACTGCACTAACCCTAATATCA---ATCTATATATCTTCTTCTACAATCACTATTATTATCATCATTTTACTGATTACCCTAGAATTAGGTGTAGCTCTAATTCAAGCCTACGTCTTTACTCTTCTGGTTAGCCTCTACTTACACGATAACTCA +>Trachypithecus_shortridgei_NC_019581 +------------TAATGAACGAAAATTTATTTACCCCATTTACAACCCCCA---CACTCCTAAATTTACCCGCTGTAGTACCCATTATTCTATTCCCCATATTATTATTTCCAACCTCCA---AGCACCTTGTTAATAACCGACTAATTGCTATTCAACAAAATCTGACTCAACTGATCCTAAAACAAATAATAATAATCCATAATACAAAAGGACGAACTTGATCCTTAATACTAGTATCTCTAATTACTTTTATTGCTACAACCAACCTCCTCGGACTATTACCTCACACATTTACACCCACCACCCAGCTGTCTATGAATTTAGCAATAGCAATTCCTCTATGAGCAGGTACAGTAATTACAGGCCTTCGCTTCAAAACCAAAAGTTCCCTAGCCCATTTTCTACCACAAGGCACACCCACACTTCTTATCCCTATATTAGTAATCATTGAAACCATCAGCTTATTTATTCAACCAGTAGCCCTAGCCGTACGCCTAACTGCTAATATTACAGCAGGGCATCTACTCATGCATCTAATCGGAAGCGCCGTACTAGCGCTATCAA---CCATTAATTTTCTTGCAACTTCACTAACCTTCGTACTCCTATTGCTATTAATAATTCTAGAGATTGCAGTTGCCCTAATCCAAGCCTATGTTTTCACACTCTTGGTAAGCCTTTACTTACACGATAATA +>Cervus_elaphus_NC_007704 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAAT---AATTATAGGCCTTCCACTAGCTACTCTCATCGTTATATTTCCTAGCCTATTATTTCCAACATCAAA---TCGTCTAGTAAATAACCGTCTTATTTCCCTCCAACAATGAATACTTCAACTTGTATCAAAACAAATAATAGGAATTCACAATGCCAAAGGACAAACATGAACACTAATACTCATGTCTCTAATCTTATTTATTGGATCCACAAATCTTCTGGGCTTGTTACCCCACTCATTTACACCAACCACACAATTATCAATAAACCTAGGCATAGCCATTCCCCTGTGAGCAGGAGCTGTAGTTACAGGTTTCCGCAATAAAACTAAGGCATCACTTGCTCACTTTCTTCCACAAGGAACTCCAACCCCATTAATTCCCATGCTAGTTATCATCGAAACTATTAGTCTTTTTATTCAACCAATCGCCTTAGCCGTACGACTAACAGCTAACATTACTGCAGGACACCTACTAATTCACCTAATTGGAGGAGCTGCACTTGCACTAATAAG---TATCAGTACTACAATAGCTCTCATCACATTTATTATTCTAGTCCTACTCACAATCCTTGAGTTTGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTTCTAGTCAGCCTTTACTTGCATGACAACAC +>Cystophora_cristata_NC_008427 +------------ATGAACGAAAATCTATTCACCTCTTTCGCTGCCCCCACA---ATAATAGGTCTACCTATCGTACTCCTAATCACCCTGTTCCCAAGCATCTTATTTCCATCCCCCGAT---CGACTAATCAACAATCGACTCGCCTCAATCCAACAATGACTGATCCAATTAACATCGAAGCAAATACTGTCAATTCACAATCATAAGGGACAAACATGAGCACTTATACTTATATCACTTATTCTATTTATCGGATCCACTAACCTACTAGGCCTTATACCACATTCATTCACCCCCACCACCCAACTATCCATAAACCTAGGAATGGCCATCCCCCTGTGAGCAGGAACAGTCATCACAGGTTTTCGATACAAAACAAAAGCATCCCTAGCCCACTTCCTACCCCAAGGAACACCTCTACCCCTCATTCCAATGCTAGTAATTATCGAAACTATCAGCTTATTTATTCAACCTATAGCCCTAGCCGTACGACTAACAGCCAACATCACTGCAGGCCACCTATTGATTCATCTAATCGGAGGAGCTACTCTTGCCCTTATAGAC---ATTAGCACTACCACAGCATTTATTACTTTCATCATCCTCATTCTACTCACTATCCTCGAATTTGCTGTAGCCCTCATTCAAGCCTATGTCTTTACACTACTAGTAAGCCTATACCTACATGATAACACC +>Simias_concolor_NC_020667 +------------TAATGAACGAAAATTTATTTACCCCTTTCACAACTCCAA---CACTCTTAGAATTACCCGTTGTAGTACCTATTGTCCTATTTCCTACGTTACTGCTCCCAACCTCAA---AATACCTTATTAATAATCGACTAATTACTATTCAACAAAAACTAGTTCAACTAGTTCTAAAACAAATAATAGCAATTCATAATACCAAAGGACAAGCCTGATCCCTAATACTAATGTCCTTAATTATTTTTATTGCCTCAACCAATTTTCTCGGACTCTTGCCCTATTCATTTACAGCTACCACCCAATTGTCCATGAATCTAGCTATAGCAATCCCTCTATGAGCAGGCACAGTAATTATAGGTCTTCGCTTCAAAACCAAAAGCTCATTAGCCCACTTTTTACCACAAGGTACACCCACACCCCTTATTCCCGCATTAGTAGTTATTGAAACCATCAGCTTATTCATCCAACCAATGGCCCTAGCTGTACGCCTAACCGCTAACATTACAGCAGGCCATCTACTCATACACCTAATCGGAAGTGCTACTCTAGCACTATTAA---CTATTAGTCTCTTTGCAACCTCACTAACTTTAGTACTCCTGGTATTATTAACAATTCTAGAAATAGCAGTTGCCCTAATCCAGGCCTATGTCTTTACACTCTTGGTAAGCCTTTACTTACATGATAATA +>Gazella_gazella_isolate_AWWP_NC_020707 +------------AATGAACGAAAATCTATTTACCTCTTTCATTACCCCTAT---AATTCTAGGCCTTCCCCTCGTTACTCTAATTGTCTTATTCCCTAGCCTATTATTTCCAACATCAAA---TCGACTAATAAATAACCGTCTTATCTCTCTTCAACAGTGAGTACTTCAACTTGTATCAAAACAAATAATAAGCATCCACAACCCCAAAGGACAAACATGAGCACTTATATTAATATCCTTAATTCTATTTATTGGGTCAACAAACTTACTAGGCCTACTACCCCACTCTTTTACACCAACCACACAACTATCAATAAATTTAGGTATAGCTATCCCCCTATGAGCAGGAGCTGTAATCACGGGCTTCCGCAACAAAACTAAAGCATCACTTGCCCACTTCTTACCACAAGGAACACCCACCCCTCTAATCCCTATACTAGTAATTATCGAAACTATTAGCCTATTTATTCAACCAGTAGCCCTCGCAGTACGATTAACAGCTAATATTACAGCAGGACACCTATTAATTCACCTAATCGGAGGAGCCACATTAGCACTAATAAA---TATTAGCACTACAACAGCTCTTATTACATTTATTATTTTAGTTTTACTAACAATTCTTGAATTCGCAGTAGCTATAATCCAAGCCTACGTATTTACTCTTCTAGTTAGCCTATATCTACACGATAACAC +>Carollia_perspicillata_NC_022422 +------------ATGAACGAAAATTTATTCGCCTCTTTCATTACCCCTACG---ATAATAGGCCTTCCTATTGTTATATTAATTATTATATTTCCCACTATCATATTTCCTTCAACTAAC---CGACTAATCAATAATCGGCTACTAGCAATTCAGCAATGATTAGTCCACCTTACATCTAAACAAATACTTTCTATCCACAGCCATAAAGGTCAAACATGAGCCTTAATACTAATATCCCTAATCCTATTCATTGGCTCCACAAACCTACTAGGCCTTTTGCCACATTCATTTACCCCAACTACACAACTCTCAATAAACCTTGGTATGGCTATCCCTCTATGAACTGGTACAGTAATTCTAGGTTTCCGACATAAAACTAAGGCTTCCTTAGCACATTTTCTCCCACAAGGCACCCCACTTCCCCTAATTCCTATGCTAATTGTCATCGAAACAATCAGTCTGTTTATTCAACCAGTAGCACTAGCCGTACGACTAACCGCTAATATTACAGCTGGTCACCTGCTAATTCACTTAATTGGAGGAGCTACCCTCGCACTCATAAGC---ATTAGCACAGCCACTGCCTTCATTACATTCGTAATTCTAGTCCTATTAACAGTATTAGAATTTGCCGTGGCCCTTATCCAAGCTTATGTATTTACTCTACTTGTCAGCCTGTACCTACATGATAATGCC +>Trichosurus_vulpecula_NC_003039 +------------TAATGAACGAAAATCTATTTGCCACATTCATCACCCCTA---CTATCATAGGTATTACAACACTACCAATCATTATACTATTCCCATGCCTAATTCTTACCACTCCAA---AACGCTGACTGCCCAATCGCATCCAAACCCTACAAATCTGACTAATCCGATTAATTACAAAGCAAATGATAACAATACACAACAAACAAGGCCGAACATGAACACTCATACTCATATCCCTAATCCTATTTATTGCATCAACTAATCTACTTGGGCTATTACCATATTCATTCACCCCAACTACACAACTATCCATAAACATTGGTATAGCTATTCCACTATGATTAGGAACTGTAATTATAGGATTCCGAAATAAACCAAAAACTTCTCTCGCACACTTCCTACCACAAGGCACACCAACCCCACTAATCCCTATACTTATTATTATTGAAACTATCAGCCTATTCATTCAACCCTTAGCCCTGGCAGTACGACTAACAGCCAATATCACTGCAGGTCACTTACTTATTCACCTAATTGGCTCAGCCACACTAGCCCTTTCAT---CTATCAACATAACAGTATCAACCATTACATTCACCATCTTATTCCTACTAACAATCCTAGAACTAGCTGTAGCCATAATTCAAGCTTACGTTTTTACACTTTTAGTAAGCTTGTATCTACATGATAACT +>Cephalophus_rufilatus_isolate_SUN_NC_020693 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTAT---AATACTAGGCTTACCCCTCGTTACTCTTATTGTCCTATTCCCCAGCCTACTATTCCCAACATCAAA---TCGACTAATTAACAATCGCCTCATTTCCCTTCAACAATGACTACTCCAACTCATCTCAAAACAAATAATAAGCATCCATAATCCTAAGGGACAGACATGAGCACTAATACTAATATCCCTAATTCTATTTATTGGCTCAACAAACCTACTAGGACTACTACCCCACTCATTTACACCAACCACACAACTATCAATAAATCTAGGCATGGCCATTCCTCTGTGGGCCGGAGCTGTTGTCACAGGCTTCCGTAATAAAACTAAAGCATCACTCGCCCATTTTCTGCCACAAGGTACACCAACCCCATTAATCCCAATACTAGTGATTATTGAGACTATTAGCCTCTTCATCCAACCAGTAGCCCTTGCTGTTCGACTGACAGCCAATATCACAGCAGGGCACCTGCTAATCCACCTAATCGGAGGAGCCACACTTGCGCTAATAAG---CATTAGCACCACAACAGCTCTTATTACATTTATTATTCTAGTCTTACTAACAGTTCTCGAATTCGCAGTGGCCTTAATTCAAGCTTATGTATTCACCCTCCTAGTCAGCCTATACCTGCACGACAACAC +>Neofelis_nebulosa_NC_008450 +------------ATGAACGAAAATCTATTCGCCTCTTTCACTACCCCAACA---ATAATAGGATTACCCATTGTTGTGTTAATTATTATATTCCCTAGTATTCTGTTTCCCTCACCTAAC---CGACTGGTCAACAATCGCCTAGTTTCACTACAACAGTGACTAGTACAACTAACATCAAAACAAATACTGGCCATCCACAACCACAAAGGACAAACTTGGGCCCTAATACTTATGTCTCTCATTCTATTTATCGGGTCAACAAACCTGTTAGGTCTACTACCTCACTCATTTACTCCAACTACCCAATTATCAATAAACTTAGGGATAGCTATCCCCCTGTGAGCTGGCACCGTGATCACCGGGTTTCGCCGCAAAACTAAAGCATCCCTGGCCCACTTTCTACCACAAGGAACACCAGGCCCTCTGATCCCTATGCTTGTAATTATCGAAACCATCAGTCTCTTCATTCAGCCCGTAGCCCTGGCCGTACGACTCACAGCTAACATTACTGCAGGTCACTTATTAATACACCTAATCGGAGGAGCTGCTTTAGCCTTGATAAAC---ATTAGCACTCCCGTTGCCCTAATCACCTTTATCATCCTTATCCTGCTGACAATCCTCGAATTTGCTGTGGCTCTAATCCAAGCCTACGTCTTTACTTTACTTGTAAGCCTATACCTACACGATAATACC +>Lynx_rufus_NC_014456 +------------TAATGAACGAAAATCTATTCGCCTCTTTCACTACCCCAA---CAATAATAGGACTGCCTATTGTTATTCTGATCATTATATTTCCAAGCATTCTATTCCCATCACCCA---ATCGACTAATTAATAACCGCCTAATCTCACTACAACAATGACTAGTACAATTAACATCAAAACAAATACTAGCCATTCATAATCACAAAGGACAAACCTGAGCCCTAATACTAATATCCCTCATCTTATTTATCGGATCAACGAACTTACTAGGCTTGTTGCCTCACTCATTCACTCCAACCACCCAGTTGTCAATAAACTTAGGAATAGCCATTCCACTATGAGCTGGCACTGTAATTACTGGATTTCGCCATAAGACTAAAGCATCTCTGGCCCACTTTTTACCACAGGGAACACCTATTCCCCTAATTCCTATGCTTGTAATCATCGAAACTATTAGTCTCTTTATTCAACCTGTGGCCTTAGCCGTACGACTTACAGCTAACATCACTGCAGGGCATCTACTAATACACCTGATTGGAGGAGCCACCCTAGCCCTGGCAA---ACATCAGCACCTCCGTTGCCTTAATTACTTTTACCATTCTCATCCTCCTAACAATCCTTGAATTCGCTGTGGCTTTAATTCAAGCCTACGTCTTCACCCTACTAGTAAGCCTGTATTTACATGACAATA +>Elaphodus_cephalophus_NC_008749 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTATCCCAAT---AGTTCTAGGCCTACCACTTGTCACCCTTATCATTATATTTCCTAGCCTTCTATTTCCAACATCAAA---CCGCCTAGTAAATAACCGTTTTATTTCACTCCAACAATGAATACTTCAACTTGTGTCAAAACAAATAATAGGAATTCACAACACCAAAGGGCAAACATGAACATTGATACTTATATCTTTAATTTTGTTTATTGGATCCACAAATCTTCTAGGCCTATTACCCCATTCATTTACACCAACCACACAGCTATCAATAAATTTAGGTATAGCCATCCCCCTGTGAGCGGGAGCCGTAGTTACAGGCTTTCGCAATAAGACTAAGGCATCACTTGCCCATTTTCTTCCACAAGGAACACCAACTCCATTAATTCCCATATTGGTAATTATCGAAACCATCAGTCTCTTTATTCAACCAATCGCTTTGGCCGTACGACTAACAGCCAATATTACTGCAGGACATTTGCTAATTCACTTAATTGGAGGAGCTACACTTGCATTAATAAA---TATCAGTACTACAATAGCCCTCATTACATTCATTATTCTAGTATTACTTACAGTCCTTGAATTTGCAGTAGCCATAATCCAAGCCTATGTATTTACCCTCCTGGTTAGCCTTTACCTGCATGACAATAC +>Eptesicus_serotinus_NC_022474 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAACA---CTAATAGGATTACCCGTCGTTATTATCATTATCATGTTCCCTAGTATTTTCTTCCCGTCAACAACC---CGTCTAATTAGTAATCGCTTAATTGCAATACAAAAATGACTTATCCGCCTAACCACAAAACAAATAATGGCCATTCATAGTAAAAAGGGTCAGACCTGGGCCCTAATACTAATATCCCTGATCATATTTATTGGGTCAACAAACCTAATTGGCCTATTACCTCATTCTTTCACCCCAACCACCCAATTGTCCATAAACCTTGGAATAGCTATTCCCCTTTGAGCAGGTACAGTAATTTTAGGCTTCCGCCACAAAACTAAAGCATCTCTAGCACATTTTCTCCCCCAAGGTACCCCATTACCCCTAATCCCCATGTTAATTATCATTGAGACGATTAGTCTATTTATTCAACCGATAGCCCTCGCTGTACGACTTACAGCAAATATTACCGCTGGGCACTTGTTGATTCACCTAATCGGAAGTGCAACTCTCGCTTTAATAGAT---ATTAGTATAACAACTGCTCTGATTACATTCATTATTCTTGTATTATTAACAGTACTAGAATTTGCCGTTGCCCTCATTCAAGCCTATGTATTTACCCTATTAGTAAGCCTCTATTTACACGATAATGCC +>Neophocaena_asiaeorientalis_NC_026456 +------------TAATGAACGAAAATCTATTTGCCCCTTTCGTAGTCCCAG---TAATACTGGGCATCCCCATCACCACCCTAATTATCATATTCCCCGCCCTATTATTCCCAACACCAA---ATCGACTAATCACCAATCGAATAGTCGCTATCCAACAATGATTAACTAAACTCACATCAAAACAGCTAATAATCACACATAACCTCAAAGGACAAACCTGATCTCTCATGCTTATTTCACTTTTCTTATTTATTGCCTCTACAAACCTTCTTGGAATAATACCCCACTCATTTACACCTACTACCCAACTCTCAATAAACCTAGGCATGGCTGTCCCTCTATGAGCTGGCACCGTCGTCATGGGTTTCCGCAACAAAATAGAAACATCCTTAGCCCACCTTTTACCACTAGGCACCCCCACCTTTCTAATCCCTATACTAGTAATAATCGAAACTATTAGCCTGTTTATTCAGCCCTTAGCCTTAGCAGTACGATTAACAGCCAACATCACAGCAGGCCACTTATTATTACACCTAATTGGAAGTGCAACCCTAGCATTGACAA---GTATCAGTCTACCTACAGCCCTCATTACATTCATTATCCTTACTTTACTAGTCATCCTTGAGTTCGCCGTAGCCTTAATCCAAGCCTACGTATTTACCCTACTAGTAAGCTTGTACTTGCAAGACAATA +>Microtus_fortis_fortis_NC_015241 +------------AATGAACGAAAATCTATTCTCCTCTTTCATTACCCCAAC---AATAATAGGCCTCCCTATCGTTGTCCTTATCATTATACTCCCCTCTGCGCTCTTAACTTCTTCCAA---ACGACTTATCCCAAATCGCTTCCACTCATTCCAACTATGACTAATCAAGCTTATTACCAAACAAATAATGTTAATCCACTCACCCAAAGGACGCACATGATCACTAATACTAGCATCTTTAATTATATTCATTGGCTCAACCAATCTCCTAGGCCTCTTACCACACACATTCACCCCAACAACACAATTATCAATAAACTTAGGAATAGCTATTCCATTATGAGCTGGAGCCGTAATTCTAGGCTTCCGCCACAAACTAAAATCCTCACTAGCCCACTTCCTACCCCAAGGCACACCCATCTCCTTAATCCCTATACTAATTATCATCGAAACTATCAGCCTATTCATCCAACCTATGGCCCTCGCAGTCCGTTTAACAGCTAACATTACCGCAGGCCACCTATTAATCCACTTAATCGGAGGGGCCACACTAGTCCTCACAAG---CATCAGCCCACCAGCGGCCACAATTACATTTATTATCTTAGCCCTCCTCACCATCCTAGAATTTGCTGTAGCCCTAATTCAAGCTTACGTATTCACCCTACTAGTAAGCCTTTACCTACATGATAACAC +>Sarcophilus_harrisii_NC_018788 +------------ATGAACGAAAATTTATTTGCCCCTTTCATCTGCCCTACT---ATTATAGGCATTTCTACTTTACCAATTATTATAATCTTCCCTTGTCTCATTTTTACAACACCCAAG---CGTTGACTCCCTAATCGAATCCAAATACTACAAATCTGACTCATCCGACTGATTACTAAACAAATAATAACAATACATAATAACCTAGGTCGCACATGAGCCCTTATACTCATAACTCTTATTCTATTTATCGCCACAACCAACCTTTTAGGCCTTTTACCCTATTCATTCACCCCAACAACACAACTTTCAATAAATATTAGCATAGCTATCCCTCTCTGAATAGCAACCGTACTACTAGGCTTTCGAAACAAACCAAAAACCTCATTAGCCCATTTCCTACCACAAGGAACTCCAACACTTCTTATCCCCATACTAATTATTATTGAGACTATTAGCCTTTTTATTCAACCACTGGCATTAGCAGTCCGATTGACAGCTAACATCACTGCTGGTCACCTACTAATTCATCTTATTAGCTCTGCTGCCTTAGCATTAGTCTCT---ATTAACATTGTGCTATCCTCAGTTACACTTATTGTTCTCTTCCTCCTAACCATCTTAGAGTTAGCTGTAGCTATAATTCAAGCTTATGTCTTCACCCTGCTAGTAAGCTTATATTTACATAATAACACA +>Prionodon_pardicolor_isolate_TC108_NC_024569 +------------TAATGAACGAAAATCTATTCGCCTCTTTCACTACCCCAA---CAATAATAGGTCTGCCCATTGTCATCCTGATCGTAATATTTCCAAGTATCCTATTTCCTTCACCTA---ACCGACTAGTCAATAATCGTCTAATTTCCCTACAACAATGACTCCTGCAATTAACATCAAAACAAATACTAACTATTCACAATAATAAAGGACAAACATGAGCCTTAATACTAATATCTCTAATTCTATTCATTGGCTCAACAAATCTACTGGGTCTTTTACCCCACTCATTTACCCCTACAACCCAACTATCAATAAATCTGGGGATGGCTATCCCCTTATGAGCAGGAACCGTCGTTACTGGCTTCCGGTATAAAATAAAAGCATCCTTAGCACACTTCCTACCCCAAGGTACACCTCTTCCTCTAATTCCTATACTTGTGATTATCGAAACCATTAGTCTTTTTATTCAACCCATAGCCTTAGCTGTACGATTAACAGCTAATATTACCGCAGGTCACCTGTTGATTCACTTAATTGGAGGGGCCACGCTAGCCTTAATAA---ATATTAGTACCTCCGTAGCCTTCATTACCTTTATTATTTTAGTCTTACTAACAATCCTCGAATTTGCAGTTGCTCTAATTCAAGCCTATGTTTTTACCTTACTAGTAAGCTTATACTTACATGACAACA +>Presbytis_melalophos_NC_008217 +------------AATGAACGAAAATTTATTTACCCCATTCACAACCCCAAC---ATTCCTAGGTCTACCCGCTGTAATACCTATCATTATATTTCCTATATTACTACTTCCAACCTCTAA---ACATCTTATCAACAACCGACTAATCACCATTCAACAAAATCTAACTCAACTAATCCTAAAACAAATAATAGCAATTCATAATACTAAGGGACAAACTTGATCCTTAATGCTAGTATCTCTAATTATTTTTATTGCCACAACCAATCTTCTCGGACTCTTACCCCACTCGTTTACGCCCACCGCCCAACTATCTATAAACTTAGCTATGGCAATTCCTCTGTGAGCAGGTACAGTGCTTACAGGTCTTCGCTTCAAAACCAAAAGCTCCTTAGCTCATTTCTTACCACAAGGAACACCTACCCTTCTTATCCCCATATTAGTAATCATTGAAACCATTAGCCTATTTATTCAACCAGTAGCCCTAGCCGTACGCCTGACCGCTAATATCACAGCAGGCCATCTGCTCATACACCTAGTCGGAAATGCCACACTAGCACTAATAAC---CATAAATTTCCTTGCAACTTCACTAACCTTAATTCTTCTAATATTATTAATAATTCTAGAAATTGCAGTTGCCTTAATCCAAGCCTACGTTTTTACACTTTTAGTAAGTCTCTATTTACACGATAACAC +>Dromiciops_gliroides_NC_005826 +------------ATGAACGAAAATCTATTTGCCCCATTCATCACCCCTACT---ATCCTAGGTATTTCAACACTACCAATCATTATATTATTCCCATGCCTAATTTTAACAACCCCAAAA---CGTTGATTACCCAACCGAATCCAAATTTTACAAATTTGATTAATTCGCCTAATTACCAAACAAATAATATCAATACACAATCAACGAGGCCGATCATGAACCCTAATACTTATATCACTTATATTATTTATTGCATCAACAAATCTACTGGGTCTTCTTCCATATTCTTTCACCCCAACAACACAGCTATCAATAAATATCGGTATAGCTATCCCACTCTGAATAGGAACAGTAGTTATAGGCTTCCGAAACAAACCCAAAGTCTCTTTAGCCCACTTCCTCCCTCAAGGAACTCCTACCCCACTGATCCCTATACTAATTATTATCGAAACAATCAGCCTATTTATTCAACCGCTAGCCTTAGCAGTCCGACTAACAGCCAATATTACTGCTGGCCACCTTCTTATTCACCTCATTGGCTCTGCAACATTAGCCCTGTCATCC---ATTAACATAACAGTATCTACAATTACATTCACTATCCTATTCCTCTTAACAATCTTAGAACTAGCAGTAGCTATAATCCAAGCCTATGTTTTTACTCTCCTAGTAAGCCTATATTTGCATGATAATTCA +>Rhinolophus_luctus_NC_018539 +------------TAATGAACGAAAATCTATTCGCCTCTTTCATTACCCCAA---CGATAATGGGCCTTCCCATTGTCATTTTAATTATTATATTCCCCACTATACTATTTCCCTCAACAA---ACCGACTTATCAACAATCGCCTGATTGCCATCCAACAATGACTAATTCACATAACATCAAAACAAATAATAACCATTCACAACCACAAAGGCCAAACATGAACCCTAATACTAATGTCCCTTATTCTATTTATCGGCTCAACAAACCTATTAGGACTTCTACCCCACTCTTTTACACCAACCACCCAACTATCTATAAACTTAGGCATAGCAATCCCCCTATGAGCAGGAACCGTTATTCTAGGTTTCCGCCACAAGACAAAAGCTTCCCTAGCACATTTCCTACCTCAAGGAACCCCTCTACCACTAATTCCTATACTAGTAATCATCGAAACTATCAGCCTATTTATTCAACCAATAGCCCTCGCCGTACGGCTTACTGCCAATATCACTGCTGGACATCTCTTAATTCACCTGATCGGCGGTGCCACACTGGCTTTACTAA---GTATTAGCACGGCCACTGCCTTCATTACATTCATCATCCTAGTCTTGCTAACTATCTTAGAATTTGCCGTCGCCCTAATCCAAGCATATGTATTCACACTACTGGTTAGTCTATATTTACACGACAATA +>Ammotragus_lervia_NC_009510 +------------AATGAACGAAAACTTATTTACCTCTTTCATTACCCCTAT---AATATTAGGCCTCCCCCTTGTTACCCTTATCGTTTTATTTCCTAGCCTATTATTTCCCACATCAAA---CCGACTAATTAACAACCGCCTCATTTCCCTCCAACAATGGCTACTTCAACTTGTATCAAAGCAGATGATAAGTATTCATAACACCAAAGGACAAACGTGAACATTAATATTAGTATCCCTAATCCTATTCATTGGGTCTACAAATCTACTAGGCCTATTACCTCACTCATTTACACCAACTACACAACTATCAATAAACTTAGGCATAGCTATTCCCTTATGAGCAGGAGCCGTAATTACAGGCTTCCGCAACAAAACTAAAGCATCACTTGCTCATTTTCTACCACAAGGAACACCCACCCCACTGATCCCAATACTAGTAATTATTGAAACCATCAGCCTCTTCATTCAACCAGTAGCCCTTGCCGTACGATTAACAGCCAACATCACGGCAGGACACTTATTAATTCACTTAATCGGAGGAGCCACCCTTGCACTAACAGC---CATCAACACCACAACAGCACTCATTACATTTATTATTTTAATCCTACTGACCATTCTTGAATTTGCAGTAGCTATAATTCAAGCCTACGTATTCACTCTCCTAGTTAACCTATACCTGCATGACAATAC +>Trachypithecus_johnii_NC_019583 +------------ATGAACGAAAATTTATTTGCCCCCTTCACAACTCCATCA---CTCCTAGGCCTGCCCGCCGTAATCCCCATCATTCTATTTCCTACACTATTAATTCCAGCCTCTAAA---GCTCTTATCAACAACCGACTAATTACTATTCAACAAAACCTAATTCAAATAACTCTAAAACAAATAATAATAACACAGAGCACCAAAGGACAAGCTTGGTCTCTAATATTAATATCCCTTTTTATTTTCATTGCCATAACTAACCTTCTCGGACTCCTACCTCATTCATTTACGCCTACCGCTCAACTATCCATAAACCTAGCCATGGCAATCCCTCTATGAGCAGGTACAGTAATTACAGGTCTCCGCTTTAAAACCAAAAGCTCCCTGGCCCACTTTCTACCACAAGGTACACCCACACCTCTTATCCCCATACTAGTAGTTATTGAGACTATTAGCTTGTTTATTCAACCAGTTGCCCTAGCTGTACGCCTAACCGCTAATATTACAGCAGGACATCTACTTATACACCTGATCGGAAACGCCGCACTAGCATTATCAGTC---AACAATTTCCTTGCAACCCCTCTAATCCTAGTACTCCTAATAGCACTAATAATTCTAGAAATCGCAGTTGCCCTGATTCAGGCCTATGTTTTCACGCTATTGGTAAGCCTTTACCTACATGATAATACT +>Eothenomys_chinensis_NC_013571 +------------TAATGAACGAAAATCTATTCGCCTCTTTCATTACCCCAA---CAGTAATAGGCTTACCTATCGTTATCCTTATCATCATACTACCGTCAATACTTTTAACCCCGTCCA---AACGACTAATCTCCAACCGCTTCCATTCACTCCAACAATGATTAGTAAAACTTATTATTAAACAAATAATATTAATCCACTCCCCTAAAGGACGGACATGATCACTCATATTAGTATCCTTAATCATATTCATCGGCTCCACAAACCTGTTAGGCCTCCTACCACACACATTCACCCCAACAACACAATTATCTACAAACTTAGGAATAGCAATTCCCCTATGAGCTGGAGCCGTAATTTTAGGATTTCGACACAAACTAAAAGCCTCATTGGCCCACTTTTTACCCCAAGGCACTCCAATCTCCCTTATCCCCATACTTATTATTATCGAAACCATTAGCCTATTCATCCAGCCCATAGCCTTAGCAGTCCGTCTAACAGCCAATATCACTGCAGGACACCTATTAATTCACCTTATTGGGGGAGCCACATTAGTCCTTACAA---GCATCAGCCCCCCAACAGCTACCATCACATTCATTATTCTAGCTCTCCTCACCATTCTAGAGTTCGCCGTAGCTCTCATTCAAGCCTACGTATTTACACTCCTAGTCAGCCTCTATCTACACGACAACA +>Piliocolobus_badius_NC_008219 +------------AATGAACGAAAATTTATTCGCCTCTTTCATAATACCAAC---AATTCTAGGCCTACCTGCTGTAGTTCCCATTATTATGTTTCCCGCACTACTATTCCCAACTTCCAA---GCACCTAATTAGTAATCGATTAATTACTATCCAACAAAATATTATCCAAATGATTCTGAAACAAATCATAACAATTCATAATACCAAAGGACAGACCTGATCTCTGATACTTATATCCCTAATCATTTTTATCGCTACAACTAATCTCCTCGGGCTATTACCACACTCATTCACACCCACCGCCCAACTATCTATAAACTTAGCTATAGCAGTTCCACTATGAGCCGGCACAGTAGTTTTAGGATTTCGCTTCAAGACTAAAAATTCCCTGGCTCACTTTCTACCACAAGGCACACCTACACCTCTTATCCCTATACTAGTAGTCATCGAAACTATTAGTTTATTTATTCAACCAGTAGCCTTAGCTGTGCGCTTAACTGCTAATATTACAGCAGGCCATCTACTCATACACCTAATTGGAAGCGCCGCACTAGCATTATTAAC---CATCAACCTCCCAACAACCTTCCTCATCCTAGTACTCCTAGTATTATTAACAATTCTAGAAATTGCAGTTGCCCTAATTCAAGCCTATGTCTTCACGCTCTTAGTGAGCCTCTACCTACACGATAATAC +>Diceros_bicornis_NC_012682 +------------ATGAACGAAAACTTATTTGCCTCTTTCACTACCCCAACA---ATTATAGGACTACCTATTGTTATCCTAATTATTATATCCCCCAGCATTATATTCCCCACATCCAAT---CGACTAATTAACAACCGCCTAATCTCCATCCAACAATGACTTCTTCAACTCACATCAAAACAAATATTATCTATCCACAACAATAAAGGTCAGACCTGAGCACTAATACTTATATCCCTCATCCTATTTATTGGCTCAACTAACCTACTAGGCCTATTACCACACTCATTTACACCCACTACTCAACTATCAATAAACCTGGGCATGGCCATCCCCTTATGGGCAGGAACGGTGTTCCTAGGCTTTCGCCATAATACCAAAACATCCCTAGCTCATTTCCTCCCCCAAGGAACACCCATTTTCCTCATCCCTGCACTAGTAATTATTGAAACCATCAGCCTATTTATTCAACCCGTAGCCCTAGCCGTACGACTAACAGCCAACATTACTGCCGGACACCTTTTGATATACTTAATCGGAGGAGCAACACTAGCTCTAATAAAT---ATCAGCCCCACCACAGCTCTTGTTACATTTATTATTCTCATCTTACTCACCATTCTTGAATTCGCTGTAGCCCTAATTCAAGCTTACGTATTTACCCTTCTAGTAAGCCTCTACCTGCACAACAACACT +>Pan_paniscus_NC_001644 +------------TAATGAACGAAAATCTGTTCGCTTCATTCGCTGCCCCCA---CAATCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTCCCCCCTCTACTGGTTCCCACCTCTA---AACATCTCATCAACAACCGACTAATTACCACCCAACAATGACTAATTCAACTGACCTCAAAACAAATAATAACTATACACAACACTAAAGGACGAACCTGATCTCTCATACTAGTATCCTTAATTATTTTTATTGCCACAACTAATCTTCTCGGACTTCTACCTCACTCATTCACACCAACCACCCAACTATCTATAAACCTAGCCATGGCTATCCCCCTATGAGCAGGCACAGTAGTCATAGGCTTTCGCTTTAAGACTAAAAATGCCCTAGCCCACTTCTTACCGCAAGGCACACCTACACCCCTTATCCCCATACTAATTATCATCGAAACTATCAGCCTATTCATTCAACCAATAGCCTTAGCCGTACGTCTAACCGCTAACATTACTGCAGGCCACCTACTCATGCACCTAATTGGAAGCGCCACACTAGCATTATCAA---CTATTAGTTTACCCTCCACACTCATTATCTTCACAATTCTAATCCTACTGACTGTTCTAGAAATCGCCGTTGCCTTAATCCAAGCCTACGTTTTTACACTTCTAGTGAGCCTCTACCTGCACGACAACA +>Mirounga_leonina_NC_008422 +------------AATGAACGAAAATCTATTCACCTCTTTCGCTACCCCTAC---AATAATAGGCCTCCCCATCGTAATCTTAGTCATCTTATTCCCAAGTATTCTATTTCCCTCTCCCGA---TCGACTAATTAATAACCGCCTTACCTCAATTCAACAATGACTAATTCAACTAACATCAAAACAAATACTATCAATTCACAACCATAAAGGGCAAACATGAGCACTAATACTTATATCACTCATCCTATTTATTGGATCTACCAATCTATTAGGCCTTCTACCACATTCATTTACCCCTACCACTCAACTATCTATAAACCTAGGCATAGCCATCCCCTTATGAGCGGGAACAGTCATTACAGGGTTTCGATATAAGATAAAAATATCCTTAGCCCATTTTCTACCTCAAGGAACACCCTTACTCCTCATTCCAATATTAGTGATTATTGAAACTATTAGCCTATTTATTCAACCCATAGCCCTGGCCGTACGACTAACAGCCAATATTACTGCAGGTCACCTACTAATTCACCTAATTGGAGGAGCTACTCTTGTTCTTATAAG---TATTAGCACTGCTACAGCCTCAATCACTTTTATTATCCTTATTCTACTCACTATCCTAGAATTTGCCGTAGCCCTTATCCAAGCCTATGTTTTCACACTACTAGTTAGTTTATATTTACATGATAACAC +>Pseudomys_chapmani_NC_014698 +------------ATGAACGAAAATCTATTTACCTCTTTTATAACTCCTACA---GTAATAGGCCTACCAGTCGTAATCACTATTATTATATTTCCATCAATTCTATTTCCATCCTCAGAA---CGACTAATCAGCAACCGTCTCCACTCATTCCAACACTGACTGATTAAGCTCATTATCAAACAATTAATATTAATTCATTCACCAAAAGGACGAACTTGAGCATTAATAATTGTCTCCCTAATTATATTTATTGGATCAACAAACCTTCTAGGACTACTACCACATACTTTTACACCAACCACTCAACTATCTTTAAACTTAAGCATAGCAATCCCGCTTTGAGCAGGAGTTGTAATCCTAGGCCTTCGACACCAACTAAAAAATTCTTTAGCTCATTTTCTTCCACAAGGAACCCCAATTCCTCTTATTCCCATACTAATTATCATTGAAACCATTAGCCTCTTAATTCAACCAATAGCACTAGCAGTACGGCTAACAGCCAATATCACAGCAGGTCACCTACTAATACATCTAATTGGAGGTGCTACCATAGTATTAATAGAT---ATTAGTCCACCAACAGCTACAATCACATTTATTATTTTATTACTATTAACAATTCTAGAATTTGCCGTAGCCCTAATCCAAGCTTACGTGTTTACTCTTCTAGTAAGCCTATACTTACACGATAATTCA +>Hippocamelus_antisensis_isolate_MRGHa9_NC_020711 +------------TAATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAA---TAATTTTAGGTCTTCCACTCGCTACTTTCATCGTTATTTTTCCTAGTCTGCTGTTCCCAACATCAA---ATCGTCTAGTTAACAACCGTCTCATTTCTCTTCAACAATGGGTACTTCAACTTACATCAAAACAAATAATAGGAACTCATAATACCAAAGGACAAACATGAACATTAATACTAATATCCCTAATTATATTTATTGGATCAACAAATCTATTAGGTCTCCTACCTCACTCATTTACACCAACCACACAACTGTCAATAAATCTAGGTATAGCCATCCCCCTATGAGCAGGAACCGTAATTACAGGCTTCCGAAATAAAACCAAAACATCACTTGCCCATTTTCTTCCACAAGGAACACCCACTCCATTAATCCCCATACTAGTTATTATTGAAACTATTAGCCTTTTCATTCAACCAATTGCTTTGGCTGTACGATTAACAGCCAACATTACCGCAGGACACTTGCTAATTCACCTAATCGGAGGAGCCACACTTACATTAATAA---ATATCAGCACTACAATAGCTCTTATTACATTCATTATTCTAATCCTACTTACAATTCTCGAATTTGCAGTAGCTATGATCCAAGCCTATGTATTCACCCTCCTAGTAAGTCTCTATTTGCATGATAATA +>Nyctereutes_procyonoides_NC_013700 +------------AATGAACGAAAATTTATTCGCCTCTTTCACTACCCCCTC---AATAATAGGTCTTCCAATCGCAGTACTTATTGTCATATTCCCATCTATTCTATTCCCCTCACCTGG---CCGCCTAATTAACAACCGCCTAATCTCCATTCAACAATGACTCATTCAATTAGTATCCAAACAAATATTATCAATCCACAACCAAAAAGGACGAACTTGAGCTCTTATGTTAGTATCATTAATCCTATTTATTGCCTCGACCAATCTACTCGGACTGTTACCCCACTCATTCACCCCTACAACTCAACTGTCCATGAATCTAGGAATAGCTATCCCCCTGTGAGCAGGAGCAGTAATTACTGGTTTTCGCTATAAAACTAAAGCATCCCTGGCACACTTCCTACCCCAAGGCACACCTATCCCCCTGATCCCAATACTAGTCATTATTGAGACTATTAGTCTATTCATTCAACCCATGGCCCTAGCCGTTCGGTTAACAGCCAATATTACCGCAGGACACCTTCTAATTCACCTAATCGGAGGCGCCACTCTAGCCCTAATCGA---CATCAGCACTACCACGGCCTTTATTACTTTTATTATCCTAATTCTACTCACTATTCTCGAATTCGCCGTTGCCCTTATCCAAGCCTACGTCTTTACTCTACTAGTAAGTCTGTACTTACATGACAACAC +>Papio_anubis_isolate_east_NC_020006 +------------ATGAACGAAAACCTATTTACCTCATTCTCAGCCCCAACA---ATCCTAGGACAACCAGCCACAATCCCCATCATCATATTCCCCACACTACTAATCCCGACCTCTAAA---CATCTCATTAACAACCAACTAACCACCGTTCAACAAAACCTCATCAAACTTATCCTAAAACAAATAATAGCACCCCACAACGCTAAAGGACAATCCTGATCTCTAATACTAATATCCTTGATCACCTTTATTACCATGACTAACCTCCTAGGGCTCCTGCCTCACTCATTTACGCCAACCACCCAACTTTCTATAAACCTAGCCATAGCAATCCCCCTGTGGGCAGGCACGATCATCACTGGCCTCCGCTTTAAAACTAAAAACTTCCTAGCTCACATACTACCACAAGGTACACCCACACCCCTTATTCCCATACTAGTAATAATCGAAACCGTTAGCCTACTTATCCAGCCAATAGCCCTAGCCGTACGACTGACTGCTAACATCACAGCCGGCCATCTATTAATACACCTAATCGGAAATACTATGCTAACACTATCAACC---ATCAACCTCTCCACCACCCTACTCACTTCTGTACTCCTAATACTACTGACCATTTTAGAGATCGCGGTTGCCCTAATCCAGGCCTACGTCTTCACACTCTTAGTCAACCTGTACCTACACAACAACACC +>Camelus_ferus_NC_009629 +------------TAATGAACGAAAATTTATTTGCCTCTTTCATTACCCCAA---CAGTAATAGGACTTCCTATTGTTATCCTCATTATTATGTTCCCAAGCATACTATTCCCAGCCCCAT---TTCGACTAATTAACAACCGTCTAATCTCTCTACAATATTGATTAATCCGACTCACATCTAAACAAATGATGACTATTCATAACCACAAGGGACAAACCTGATCCTTGATGCTAATATCTCTAATCATGTTTATTGGGACTACCAATCTCCTAGGACTCCTCCCACATTCATTTACCCCTACCACACAACTATCGATAAATCTAGGAATAGCAATTCCTTTATGAGCCGGAACCGTGGTCACTGGTTTTCGCAATAAAACAAAGGCATCACTAGCACATTTTCTCCCCCAGGGAACACCTACACCTCTAATCCCAATACTAGTAATCATCGAGACTATTAGCCTATTCATTCAACCCGTGGCCCTGGCTGTTCGACTAACAGCCAATATCACAGCAGGCCACCTATTAATACACTTAATTGGAGGAGCCACTTTGGCACTAATAA---GCATTAATACACCAACAGCTCTTATTACATTTATTGTCCTAATTTTACTCACGATCCTTGAATTTGCCGTGGCTATAATCCAAGCCTATGTGTTCACCCTATTAGTAAGTCTATACTTACATGATAATA +>Rattus_leucopus_NC_014855 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAAC---AGTAATAGGTCTACCAATTGTCGTGACCATCATTATATTCCCATCAATCCTATTCCCATCATCAGA---ACGTCTAATTAGCAACCGTCTACACTCATTTCAACACTGACTAATTAAACTTATCATCAAACAAATAATATTAATCCACACACCAAAAGGACGAACCTGAGCACTAATAATTGTATCACTAATTATATTTATTGGCTCAACTAACCTCCTAGGCCTACTTCCCCATACATTCACTCCTACCACTCAACTATCCATAAACCTAAGCATAGCCATCCCCCTATGAGCAGGGGCCGTAATCTTAGGATTCCGACACAAACTAAAAAATTCTTTAGCCCATTTCCTACCACAAGGAACACCCATTTCACTCATTCCCATACTAATTATTATCGAAACCATCAGCTTATTTATTCAACCAATAGCACTAGCAGTACGACTAACAGCAAACATCACAGCAGGCCACCTACTAATGCATCTAATTGGAGGGGCTACTCTAGTACTCATGAA---CATCAGCCCACCAACCGCCACAATTACATTCATCATCCTTCTTCTACTTACAATGCTCGAATTCGCCGTAGCCTTAATTCAAGCCTATGTATTTACTCTCCTAGTAAGCCTGTACCTACATGATAACAC +>Eulemur_fulvus_fulvus_NC_012766 +------------ATGAACGAAAATTTATTTGCCTCTTTCATTACCCCAACA---ATTGTAGGAATTCCTATCGTCATCTTTATCGTTATAATTCCAAGCATTCTCTTTCCCTCCCCTACT---CGCCTAATTAATAACCGACTAACCTCATTACAACAATGACTAATTCAGTTAATCCTAAAACAATTAATATTAATTCACAGTATCAAAGGACGAACTTGATCTCTAATATTAATTTCACTAATTCTATTTATTGGCTCTACTAATTTACTAGGCTTATTGCCCCACTCATTTACTCCTACCACACAACTATCTATAAACCTAGGCATAGCAATTCCACTCTGAGCAGCTGCGGTAATCAAAGGTTTCCGCCACAAAACAAAGGCATCCCTGGCCCACTTCCTTCCTCAAGGAACACCAATCCCTTTAATTCCTATACTAGTAATTATTGAAACCATTAGCCTCTTCATTCAACCTATAGCCCTGGCCGTACGACTAACTGCCAACATTACAGCAGGTCACCTTCTTATGCATCTAATTGGAGGGGCTACCTTAGTACTTTCTTCC---ATCAGCCCTACTACAGCTTCGATCACATTCATTATCCTCACCCTTCTTACAATTCTTGAATTCGCCGTTGCTCTAATTCAGGCCTATGTATTTACCCTACTAGTTAGCCTTTACTTACATGACAACACC +>Propithecus_edwardsi_isolate_LAMB2_NC_026087 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAA---CAATTGTAGGAATCCCTATTGTGATCCTAATCATCGCAATCCCTAGCATTCTCTTCCCTTCGCCCA---CCCGTCTCATTTCCAACCGATTGACTTCCTTACAACAATGACTTATTCAACTAGTACTAAAACAACTAATAATGATACACAGCATTAAAGGACGAACTTGGTCCCTCATACTAATTTCACTAATCCTATTTATTGGTTCAACCAACTTACTAGGTCTATTACCCCACTCATTCACCCCCACTACTCAACTATCAATGAATCTAGGCATAGCCATCCCACTATGAGCTGCTGCAGTCATTACAGGCTTTCGTCATAAAACAAAAATATCCTTAGCTCACCTACTACCACAAGGAACGCCAGTCCCTCTTATTCCCATACTAGTAATCATCGAAACCATTAGCCTTTTCATTCAACCTATAGCATTAGCCGTACGATTGACAGCTAACATTACAGCAGGCCACCTACTCATACACTTAATTGGTGGAGCCACCTTAGTATTAACCT---CAATTAGTCCCACCACTGCCTCAATTACATTTACTATTCTTATTCTCCTTACAATCCTTGAATTTGCCGTCGCCCTAATCCAAGCCTATGTATTTACTTTACTAGTTAGCCTTTATTTACATGACAACA +>Pseudois_schaeferi_NC_016689 +------------AATGAACGAAAATCTATTTACCTCTTTCATTACCCCTAT---AATATTAGGTCTCCCCCTTGTTACACTCATTATTTTGTTTCCTAGCTTATTATTCCCTACACCAAA---CCGACTAATCAACAACCGCCTCATCTCTCTCCAGCAATGAGCAGTTCAAGTAGTATCAAAACAAGTAATAAGTATTCACAACACCAAAGGACAATCATGAACATTAATATTAATATCCTTAATCCTATTTATTGCATCCACAAACTTATTAGGCCTTTTACCCCACTCATTTACACCAACTACACAACTATCAATAAATCTAGGCATGGCTACCCCCTTATGAGCAGGAGCCGTAATCACAGGCTTTCGCAACAAAACTAAAGTATCACTTGCCCATTTCCTACCACAAGGCACACCCACCCCACTAATCCCAATACTAGTAATTATTGAAACTATTAGCCTCTTCATCCAACCAATAGCCCTTGCCGTACGACTAACAGCTAACATTACAGCAGGACACCTATTAATTCATTTAATCGGAGGAGCCACTCTTGCACTAACAAG---CATCAGCACCACAACAGCGCTCATCACATTTGTCATTTTAATTTTACTAACAATTCTTGAATTCGCAGTAGCCATAATCCAAGCCTACGTATTTACCCTCCTAGTTAGCCTATATCTGCATGATAACAC +>Raphicerus_campestris_isolate_SUN_NC_020741 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTATA---GTACTAGGTCTTCCCCTCGTCACACTCATTGTCTTATTTCCCAGCCTATTATTCCCAACATCAAAC---CGACTAGTAAACAACCGCCTTATCTCTCTCCAACAATGAATTCTCCAACTCACATCAAAACAAATAATAAGCATCCACAACCCCAAAGGACAAACATGAGCATTAATACTAATATCCCTGATCATATTTATTGGGTCTACAAATCTTCTAGGTCTATTACCCCACTCTTTTACACCAACCACACAACTATCAATGAACTTAGGCATGGCCATCCCCCTATGAGCAGGAACTGTAATTACAGGCTTCCGCAACAAAACCAAAGCGTCACTTGCCCACTTCTTACCACAGGGAACACCAACCCCCTTAATTCCCATACTAGTAATTATTGAAACTATTAGCCTATTTATTCAACCAGTAGCCCTCGCCGTACGACTGACAGCCAATATTACAGCAGGGCATTTATTAATTCATTTAATTGGGGGAGCTACCCTTGCACTCATAAGC---ATCAGTACTACAACGGCCCTAATTACATTTATTATTTTAATTTTACTAACAGTTCTCGAATTTGCAGTAGCTATGATTCAAGCCTACGTATTTACTCTCTTAGTTAGCCTATACTTACATGACAACACA +>Ursus_maritimus_NC_003428 +------------TAATGAACGAAAATTTATTTACCTCTTTTATCACCCCAA---CGATAGTGGGAATTCCTATTGTACCTTTAATTATCATGTTTCCGAGCATTTTATTTCCTTCTCCCA---GTCGACTGATCGATAATCGCTTAGTATCTATTCAACAGTGACTAGTTCGGCTAACATCAAAACAAATATTATCCATTCATAGCCACAAAGGACAAACCTGGGCACTAATATTGATATCACTAATCCTATTTATTGGCTCAACTAATCTTCTGGGTCTATTACCGCACTCATTCACACCTACCACACAACTGTCAATGAACCTAGGAATGGCTATTCCCTTATGGGCAGGTACAGTCGCTACTGGATTCCGATACAAGACCAAGGCATCCTTGGCTCACTTTCTACCTCAAGGGACACCTTTCCCTCTAATCCCGATACTCGTAATTATTGAAACAATCAGCCTATTTATCCAGCCTGTGGCCCTGGCCGTGCGACTAACCGCTAATATTACTGCAGGCCATTTGCTCATTCATTTAATTGGGGGAGCTACTTTGACTCTAACAA---GTATTAGCACTATTACAGCCTTTATCACCTTTACCGTTCTAGTACTACTTACCATTCTCGAGTTCGCTGTAGCCCTCATTCAGGCCTACGTCTTCACCCTGCTAGTAAGCCTATACCTACACGATAACA +>Hydropotes_inermis_argyropus_NC_018032 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAAT---AATTTTAGGCCTCCCACTCGTTACCCTTATCGTTATTTTTCCCAGCCTACTATTTCCCACATCTAA---TCGTCTGATTAGTAACCGTCTTATTTCACTTCAACAATGAGTACTTCAACTTGTATCAAAACAAATAATAGGGATTCACAATACTAAAGGACAAACATGAACATTAATACTTATATCCCTGATTCTATTTATTGGATCAACGAACTTATTAGGCCTACTACCCCATTCATTTACACCAACCACACAACTATCAATAAATTTAGGCATAGCCATTCCCTTATGAGCAGGTACTGTAATTACAGGCTTCCGTAATAAAACTAAAGCATCACTTGCTCATTTTCTCCCACAAGGAACACCCACCCCACTAATCCCAATACTAGTTATTATTGAAACTATTAGTCTATTTATTCAACCAATCGCCCTAGCCGTACGATTAACAGCTAATATCACTGCAGGGCACCTGTTAATTCACCTAATTGGAGGAGCCACACTTGCACTAATAAG---TATTAGTACTACAATGGCCTTTATTACATTTATTATTCTGGTCTTACTCACAGTTCTTGAATTTGCAGTAGCTATAATTCAGGCTTACGTATTTACCCTTTTAGTTAGCCTCTACCTGCACGACAATAC +>Ratufa_bicolor_NC_023780 +------------ATGAACGAAAATTTATTTGCCTCTTTCATTACCCCTACA---ATAATAGGCCTTCCTATTGTTATTATTATTGTCCTGTTTCCCAGTATTCTCTTCCCCTCTCCAAAT---CGACTAGTTAATAACCGAGTAATTTCACTTCAACAATGACTAATCCATTTAATTCTAAAGCAAATAATGATAATACACAATAAAAAAGGACAAACATGATCTCTTATACTTATTTCATTAATTATCTTCATCGGCTCTACAAATCTTTTAGGACTCTTGCCATACTCTTTCACACCCACCACTCAACTATCTATGAATTTAGGAATAGCTATTCCACTTTGAGCAGGAGCTGTAATCACAGGATTTCGTTACAAAGCCAAAGCATCACTAGCCCACTTTCTCCCCCAGGGCACTCCAATCCCCCTTATCCCAATGCTTATCATCATTGAAACAATCAGCCTGTTTATCCAACCCATAGCCCTTGCTGTACGACTAACAGCAAATATCACGGCCGGTCACCTACTAATACACCTCATTGGAGGCGCTACTCTAGTACTAACCTCC---ATTAGCCCTCCTGCCGCTATAATTACATTCATTATCCTAGTACTACTAACAATCCTCGAATTCGCAGTAGCTTTAATTCAAGCATATGTTTTCACTCTCCTAGTTAGCCTGTACCTACATGACAACACA +>Panthera_pardus_NC_010641 +------------TAATGAACGAAAATCTATTCACCTCTTTCACTACCCCAA---CAATAATAGGACTGCCTATTGTCGTATTAATTATTATATTCCCCAGCATTCTATTCCCCTCGCCCA---ATCGACTAATTAATAACCGCCTAGTCTCACTCCAGCAGTGACTAGTACAACTAACATCAAAACAAATACTAGCTATTCACAGCCATAAAGGACAAACTTGAGCCCTGATACTTATGTCTCTCATTTTATTTATTGGGTCGACAAACCTATTGGGTCTACTGCCCCACTCATTTACTCCAACTACTCAATTATCAATAAACCTAGGAATAGCTATTCCCCTATGGGCCGGCGCCGTAGTCACCGGGTTTCGCTACAAAACTAAAGCGTCTCTAGCCCACTTTCTACCACAGGGAACACCAATCCCCCTGATCCCTATGCTTGTAATTATTGAGACCATTAGCCTTTTTATCCAGCCCGTAGCTCTGGCCGTACGACTTACAGCTAACATTACTGCAGGCCACTTATTAATACACTTAATTGGAGGAGCTGCTCTAGTCCTAATAA---ACATTAGTGCCTCTATTGCTTTAATTACCTTTATTATCCTCATCCTGCTGACAATCCTTGAATTCGCTGTGGCCCTGATCCAAGCCTACGTCTTTACTCTACTTGTAAGCCTGTATCTACACGATAATA +>Hemitragus_jayakari_NC_020621 +------------AATGAACGAAAATCTATTTACCTCTTTCATTACCCCTAT---AATACTAGGCCTTCCCCTTGTAACTCTTATCGTTTTATTTCCTAGCTTATTATTTCCCACGTCAGA---CCGGTTAGTCAACAACCGCCTCATCTCCCTCCAACAATGATTACTTCAACTTGTATCAAAACAAATAATAAGTATTCACAACACTAAGGGACAAACATGAACATTAATATTGGTATCCCTAATCCTATTCATTGGATCCACAAATTTACTAGGCCTATTACCTCACTCATTTACACCAACTACACAACTATCAATAAATCTAGGCATAGCCATTCCCCTATGAGCAGGAACCGTAATCACAGGCTTTCGCAATAAAACTAAAGCATCACTTGCCCACTTGCTACCACAAGGGACACCCACCCCACTGATCCCAATACTAGTAATTATTGAAACCATCAGCCTCTTTATTCAACCAGTAGCCCTTGCTGTACGACTAACAGCCAACATCACAGCAGGACACTTACTAATTCACTTAATCGGAGGAGCCACCCTTGCACTAATAAC---AATCAGCACCACAACAGCACTTATTACATTCATTATTCTAATTCTACTAACCATTCTCGAATTCGCAGTAGCTATAATTCAAGCCTACGTATTCACTCTCCTAGTTAGCTTATACCTGCATGACAACAC +>Didelphis_virginiana_NC_001610 +------------ATGAACGAAAATCTATTTGCCCCATTCATCACACCAACA---ATTTTAGGTATTACAACACTACCAATTATTATTACATTTCCATGTCTTATCCTATCTTCTCCCAAA---CGATGATTACCAAATCGAATTCAAATCTTACAAATATGATTAATCCGCTTAATCACTAAACAAATAATGACAATGCATAACAAACAAGGACGAACCTGAACTCTAATACTTATATCACTAATTCTATTTATCGCTTCAACTAATTTACTAGGACTTCTACCATACTCTTTTACACCTACTACACAACTTTCTATAAATATTGGAATAGCTATCCCATTATGAGCAGGAACAGTAATTATAGGATTCCGAAATAAACCAAAAATATCTCTAGCTCATTTTTTACCTCAAGGTACACCTACTCCTTTAATCCCAATACTTATTATTATTGAAACTATTAGCCTATTTATTCAACCACTAGCTCTTGCAGTACGACTAACAGCTAATATTACAGCTGGACATCTTTTAATTCATCTTATTGGGTCAGCTACATTAGCCCTATCTTCA---ATTAGTATAACTGTATCAACTATTACATTCTCTATCCTATTTCTCCTAACTCTTCTCGAAATCGCTGTAGCTATAATTCAAGCTTACGTATTTACCCTACTAGTAAGCTTGTATCTACATGATAACTCA +>Pongo_pygmaeus_NC_001646 +------------TAATGAACGAAGATCTATTCACCCCATTCACTACCCCCA---CAGTCCTAGGCCTCCCCGCTGCAATTCTAGTCATCTTATTTCCCCCCTTACTAGTCCCTACCTCCA---AACATTTCATCAACAACCGTCTAATTACCACCCAGCAATGACTAATCCGACTCACCCTAAAACAAATAATAATCACCCATAACACTAAAGGACGAACTTGATCCCTAATACTAACATCCCTAATCATTTTTATCGCCTCAACCAACCTCCTCGGACTCTTCCCCTACTCATTTACACCAACTACCCAGCTATCCATAAACTTAGCTATAGCAATCCCCCTATGAGCAAGCACGGTAGCCATGGGCCTACGCTTCAAGGCCAAAATTAGCCTAGCTCACCTCTTGCCACAAGGTACCCCCACACCCCTCATCCCCATACTAATTATTATTGAAACCATTAGTCTTTTTATTCAACCGCTAGCCTTAGCCGTACGCCTAACCGCCAACATCACTGCAGGCCACCTGCTCATGCACCTAATTGGAAGCGCCACACTAACAATACTAA---CCATTAATCTCCCCCTGACCCTCATTACCCTTACAATCCTAACCCTGTTAACGATCCTAGAAATTGCCGTTGCCCTAATTCAAGCCTACGTCTTCACACTTCTAGTAAGCCTCTACTTACACGACAATT +>Chinchilla_lanigera_NC_021386 +------------AATGAACGAAAACTTATTTGCCTCTTTTGCCACACCAAC---ACTAGCAGGCCTCCCAATCGTCACCCTCATTATCCTATTCCCAAGCATTTTCTTCCCATCACCTAA---TCGACTAACCAACAACCGCTTAGCTACATTCCAACAATGATTAATTAAGCTAGTCCTAAAACAAATGATACTAATCCACAACAATAAAGGACGAGCTTGATCCCTAATATTAATCTCCCTGATCATATTCATCGGGTCAACCAACCTACTAGGCCTACTACCCCACTCCTTCACTCCAACAACACAACTATCAATAAACCTAGGAATAGCCATCCCACTCTGGGCCGCAACCGTCGTATTAGGATTCCGCCATAAGACAAAAGCCTCCTTAGCCCACTTCCTCCCACAAGGCACTCCCGCTATACTAATCCCAATGCTCGTAGCAATCGAAACAATCAGTTTATTCATCCAACCGGTAGCACTAGCAGTTCGACTAACCGCTAACATTACCGCAGGGCACCTGCTCATGCACTTAATCGGAGGCGCAACCTCAGTCCTAATCCC---TATCAGCCCAACCGCAGCCCTAACAACCTTTACTATTTTATTTCTTCTAACTATTCTCGAATTCGCTGTAGCACTTATTCAAGCATATGTCTTCACTTTACTAGTCAATCTATACCTACACGATAATAC +>Rhinopithecus_strykeri_NC_018059 +------------ATGAACGAAAATTTATTTACCCCATTTATAACCCCAACG---CTCCTAGGCTTGCCCGCTGTAGTACCTATCATTCTATTCCCTACATTATTATTTCCAACTTCCAAG---CACCTTATTAGTAATCGACTAATTACTACCCAGCAAAATCTAATTCAACTAATTATAAAACAAATAATAATAATTCACAATGCCAAAGGACAAACCTGATCCCTAATACTCATGTCCCTAATTATTTTTATTGCTACAACAAATCTTCTAGGACTCTTACCCCACTCATTTACCCCTACCACGCAACTGTCCATAAATCTAGCTATAGCAATTCCCCTGTGAGCAGGTACAGTAATTACAGGTCTTCGCTTCAAAACCAAAAACTCCCTAGCTCACTTTTTACCACAAGGCACACCTACACCTCTTATTCCCATATTAGTAGTTATCGAAACTATTAGCTTATTTATTCAACCAATAGCCCTAGCCGTACGCCTGACCGCCAACATCACAGCAGGACACCTACTAATACACCTAATCGGAAGTGCTATACTAGCACTATTAACT---ACTAGTTTCCTTGCAACCTTACTGACTTTAGTACTCCTACTATTATTAACAATCCTAGAAATAGCAGTTGCCCTAATCCAGGCCTACGTTTTTACACTCTTAGTAAGCCTTTATCTACATGATAATACT +>Phoca_largha_NC_008430 +------------TAATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCTA---CAATAATAGGTCTTCCTATCGTAATCCTAATTATCTTATTCCCAAGCATCCTATTTCCATCTCCTG---ACCGACTAATCAATAATCGCCTCACCTCAATTCAACAATGATTAATCCAACTAACATCAAAACAAATGTTATCAATCCATAACCATAAAGGACAGACATGAGCACTTATACTTATTTCACTTATTCTATTTATTGGATCCACTAACCTGCTAGGCCTCCTACCACACTCATTCACCCCTACCACCCAACTATCCATAAACCTAGGAATGGCTATCCCCCTATGAGCAGGAACAGTCATCACGGGCTTTCGACACAAAACAAAAGCATCCCTAGCCCACTTCCTACCCCAAGGAACACCTCTACCCCTTATTCCAATACTAGTGATCATCGAAACTATTAGCCTATTTATTCAACCCATAGCTTTAGCCGTACGACTAACGGCTAATATTACTGCAGGTCACCTGCTAATTCACCTAATCGGAGGAGCTACCCTCGCCCTTATAG---ACATTAGCACTGCCACAGCATTCATTACTTTCACCATCCTTATCCTACTCACTATCCTTGAATTTGCTGTAGCCCTCATTCAAGCCTATGTCTTCACACTGCTAGTAAGCTTATATCTACATGACAATA +>Apodemus_chejuensis_NC_016662 +------------AATGAACGAAAATCTATTTGCCTCTTTTATCACTCCCTC---AGTAATAGGACTCCCAATTGTAATTACTATTATCATATTTCCATCTATTCTATTCCCATCATCAGA---ACGTTTAATTAGTAATCGGCTTCACTCATTTCAACACTGACTAATCAAACTAATTATCAAACAAATAATACTTATTCACACACCAAAAGGACGGACTTGAACTCTAATAATTGTCTCCCTTATTATATTCATCAGCTCAACTAACCTTCTAGGCCTTCTTCCACACACATTTACACCGACTACTCAACTATCAATAAATCTTAGTATAGCAATCCCACTATGAGCAGGAGCAGTCCTATTAGGGTTTCGCCATAAATTAAAAAGCTCCTTAGCTCATTTCCTTCCACAAGGCACCCCTATTTCACTTATCCCTATACTAATTATTATCGAAACAATTAGTCTATTTATTCAACCTATAGCTCTAGCAGTACGATTGACAGCCAATATTACCGCAGGGCATCTACTTATGCATCTAATTGGAGGAGCAACCCTAGTCCTTATAAA---TATTAGCCCACCCACCGCTACTATTACATTCATTATTTTACTCCTTCTCACAGTACTAGAGTTTGCTGTAGCCCTAATTCAAGCATACGTATTTACTCTTCTAGTAAGCCTATATCTACACGATAACAC +>Pseudocheirus_peregrinus_NC_006519 +------------ATGAACGAAAATCTATTTGCCCCATTCATCACCCCTACA---ATCATAGGTATTACAACCCTGCCTATCATCATACTATTCCCATGCCTAATTTTAAGCACACCAAAA---CGTTGATTACCAAACCGCATCCAAACCCTTCAAATTTGACTGATTCGCCTGATTACAAAACAAATAATAACCATACACAATAAACAAGGACGATCTTGAACTCTAATACTCATTTCACTAATTCTATTCATTGCGTCCACTAACCTACTAGGACTACTCCCATATTCCTTTACTCCAACCACACAATTATCAATAAACATCGGAATAGCTATCCCACTGTGAATAGGAACCGTAGTAATAGGATTCCGAAACAAACCAAAAGCATCATTAGCCCATTTTCTTCCACAAGGAACTCCTACCCCATTAATTCCAATGCTAATTATCATTGAAACCATTAGCCTATTCATTCAACCACTAGCTCTAGCGGTGCGACTCACAGCTAACATCACAGCAGGCCATCTTCTTATCCATCTAATTGGCTCAGCAACCCTGGCCCTCTCATCC---ATCAGCATAGCTGTGTCATCAATCACTTTTATAATTCTATTTCTACTAACAATTCTAGAATTAGCTGTAGCTATAATTCAAGCCTACGTCTTTACCTTACTAGTAAGCCTATACCTGCATGACAACTCC +>Uropsilus_sp_1_FT_2014_NC_018598 +------------ATGAACGAAAATCTATTCGCCTCTTTCATTACCCCTACA---ATAATAGGACTTCCAATTGTTGTATTAATCATCATATTCCCAAGTATTATATTCCCTACCCCAAAC---CGACTTATCAATAATCGTGTAATCTCTTTACAACAATGACTTATTCAACTGACTTCCAAACAAATAATAAGTATCCATAATATTAAAGGACAAACCTGATCCCTCATACTAATATCATTAATTATATTTATTGGCTCAACCAACCTACTAGGTCTACTACCACACTCATTTACGCCGACAACACAACTGTCAATAAATTTAGGTATAGCCATTCCATTATGAGCAGGAACAGTAATTACAGGATTCCGATACAAAACAAAAGCGTCCCTAGCCCATTTCTTACCTCAAGGAACTCCACTGCCCCTTATTCCTATATTAATTATTATCGAGACCATTAGCCTATTTATTCAACCCATGGCCTTAGCCGTACGACTAACCGCAAACATTACTGCTGGCCACCTATTAATTCATCTTATCGGCGGGGCCACTCTGGCTTTAATAAGT---ATTAGCCCAACTACTGCAGCAATTACATTTATTATTCTAGTTCTATTAACAATTCTAGAGTTCGCAGTGGCCCTAATTCAAGCTTATGTGTTTACACTTCTAGTTAGCCTATACTTACATGATAATACA +>Lepus_hainanus_NC_025902 +------------TAATGAACGAAAATCTGTTCTCCTCTTTCATTACCCCAA---CAATAATAGGCTTACCAATCGTAATCCTAATTATTATATTCCCAACCCTATTATTTCCTACCCCTA---CCCGACTAATCAACAACCGACTAGTCTCAGCCCAACAATGGTTAGCCCAGTTAATTCTAAAACAAATAATAATAATGCACTCCCCCAAAGGACGAACCTGGTCCCTCATGTTGATCTCCCTAATTATATTTATTGGCTCGACTAACCTACTGGGCCTCTTACCCCACTCATTTACACCAACAACCCAATTATCAATAAATCTAGGGATAGCTATTCCATTATGAGCAGGGGCTGTAATTACAGGCTTCCGTTACAAAACTAAAGCATCATTAGCCCACTTTCTCCCGCAAGGAACACCTGTACCCCTTATTCCCATACTAGTGATTATTGAAACAATTAGTCTATTCATCCAACCCATGGCCCTAGCCGTACGACTTACAGCCAACATTACAGCAGGCCACTTACTAATACATCTCATTGGAGACGCGGCACTTGCCCTAATCT---CAATTAGTCCAACAACAGCCCTAATTACTTTTATTATTCTGATTCTCTTAACAATCCTAGAATTTGCTGTAGCCCTAATTCAAGCCTACGTTTTCACCCTTCTTGTAAGCCTATATTTACACGATAACA +>Phoca_groenlandica_NC_008429 +------------AATGAACGAAAATCTATTCGCCTCTTTCGCTGCCCCTAC---AATAATAGGTCTTCCCATCGTAATCCTAATTGTTCTATTTCCAAGCATCTTATTTCCATCCCCTGA---TCGATTAATCAACAATCGTCTCGCCTCAATTCAACAATGATTAATTCAGTTAACATCAAAGCAAATGCTATCAATCCACAACCATAAAGGACAAACGTGAGCACTTATACTTATATCACTTATCCTATTTATTGGGTCTACTAACCTGCTAGGCCTCCTACCACACTCATTCACTCCTACCACCCAACTATCCATAAACCTGGGAATGGCTATCCCCCTGTGAGCAGGGACAGTCATCACAGGTTTTCGATATAAAACAAAAATATCCCTGGCTCACTTCCTACCTCAAGGAACACCCTTACCTCTCATTCCAATACTAGTGATTATCGAAACTATCAGCCTATTCATTCAACCCATAGCCTTAGCCGTACGACTAACAGCTAACATTACTGCAGGTCACCTGCTAATTCACCTAATCGGAGGAGCTACCCTTGCTCTCATAGA---TATTAGCACCACCACAGCATTCATTACTTTCATCATCCTTATCTTACTCACTATCCTTGAATTTGCCGTAGCCCTCATTCAAGCCTATGTCTTTACACTACTAGTAAGCCTGTACCTACATGACAACAC +>Rucervus_duvaucelii_isolate_CYTO_NC_020743 +------------ATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAATA---ATTTTAGGCCTCCCACTCGCAACTCTTATCGTTATATTCCCTAGCCTACTATTTCCAACATCAAAT---CGTCTAGTAAACAATCGTTTTATTTCCCTTCAACAATGAATACTTCAACTTGTATCGAAGCAAATAATAGGGATTCACAATGCCAAGGGGCAAACATGGACATTAATACTTATATCCTTAATTCTATTTATTGGATCCACAAATCTCCTGGGCCTACTACCCCATTCATTTACACCAACCACACAATTATCAATAAATCTAGGCATAGCTATCCCTCTGTGAGCAGGAGCCGTGGCTACAGGCTTCCGCAATAAAACTAAAGCATCACTTGCTCACTTTCTTCCACAAGGAACTCCAACTCCACTAATTCCCATACTAGTTGTCATTGAAACTATTAGTCTCTTTATTCAACCAATCGCCTTAGCCGTACGATTAACAGCCAATATTACTGCAGGACACCTGCTAATTCACCTAATTGGAGGAGCTACACTTGCACTAATAAAC---ATCAGTACTACAATAGCCCTAATCACATTTATTATTCTAGTACTACTTACAATTCTTGAATTTGCAGTAGCCATGATTCAAGCATACGTATTTACTCTTCTAGTCAGCCTTTACTTGCATGACAACACA +>Hoolock_hoolock_isolate_Faisal_NC_023377 +------------TAATGAACGAAAATCTATTCGCCTCATTCACTACCCCTA---CAATCCTAGGCCTGCCTGCTGCAGTACCAATTATTCTATTCCCCTCCCTATTAATTCCCACCTCCA---AATATCTCATCAACAACCGACTAATTACTACCCAGCAATGACTAATTCAACTGACCTTAAAACAAATAATAGCAATACATAATGCCAAAGGACGAACCTGATCCCTCATATTAATTTCCCTAATTACTTTTATTGCCACAACCAACCTTCTTGGTCTCCTACCCCACTCATTTACGCCAACCACCCAACTATCCATAAACCTAGCCATAGCAATTCCTCTGTGAGCGGGCACAGTAGCCATGGGCTTTCGTCTTAAAACCAAAAATACCCTTGCTCACCTCCTACCCCAAGGCACACCTACACCCCTTATTCCCATATTAATTATTATTGAAACCATCAGCCTATTTATTCAACCCATAGCCCTAGCCGTACGGCTAACTGCAAACATTACAGCAGGTCACCTACTAATACACTTGATCGGAGCAGCCACATTAGCCCTATCAA---CTATCAATCTACTCACAACCCCTGTCACCTTCACAATTCTAACCCTACTAACAATCCTTGAAATCGCCGTCGCCCTAATTCAAGCGTATGTCTTCACACTCCTGGTAAGCCTCTATCTGCACGACAACA +>Arctodus_simus_NC_011116 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAAC---AATAATAGGAGTCCCCATTGTAGTCCTAATCGTCGTATTCCCAAGTATTCTATTTCCATCCCCTAG---TCGACTGATTAATAACCGCTTAGTTTCTATTCAACAGTGACTAGTCCAGCTAACATCAAAGCAGATATTGTCCATTCACAATCACAAGGGACAAGCCTGAGCACTGATATTAATATCACTGATCTTATTTATTGGTTCGACCAACCTTCTAGGTCTACTACCACACTCATTTACGCCTACCACACAACTATCAATGAACTTAGGAATAGCCATTCCCTTATGAGCGGGCACAATTGTCATCGGATTTCGATATAAAACCAAAGCATCTCTGGCTCACCTCCTACCCCAAGGAACACCCTTTCCCCTAATTCCGATACTCGTGATTATTGAAACTATTAGTCTATTCATTCAACCCATGGCCTTAGCCGTGCGACTAACCGCCAATATCACTGCGGGTCACCTACTTATTCATCTAATTGGAGGAGCTACTCTAGCTTTAACAAA---CATTAGCGTCGCTACAGCCCTCATCACTTTCACTGTCCTAGTACTACTCACTATTCTTGAGTTCGCTGTGGCTCTTATCCAAGCCTATGTCTTCACTCTACTAGTAAGTCTATACTTACATGATAACAC +>Dasyurus_hallucatus_NC_007630 +------------CATGAACGAAAATCTATTTGCCCCTTTCATCTGCCCTAC---TATTATAGGCATCTCTACTCTACCTATTATCATAATCTTTCCCTGTCTCCTTTTTACAACGCCTAA---ACGTTGACTCCCCAACCGAATTCAAATCTTACAAATCTGACTTATCCGACTAATTACTAAACAAATAATAACTATACATAACAATTTAGGCCGCACATGAACTCTTATACTTATAACCCTTATCTTATTTATTGCAACTACTAATCTTCTAGGACTTTTACCATATTCTTTCACTCCAACAACTCAACTCTCAATAAATATTAGCATAGCCATCCCCCTTTGGATAGGAACTGTAGTTTTAGGCTTCCGAAATAAACCTAAAGCCTCATTTGCCCACTTTCTACCACAAGGAACTCCTACACCTCTTGTCCCTATACTAATTATTATCGAAACTATTAGCCTTTTTATTCAGCCCTTAGCACTAGCAGTTCGACTAACAGCCAATATCACTGCTGGTCATCTATTAATTCATCTAATTAGCTCCGCTGCACTAACATTAATCTC---TATCAACATTCTACTAACCTCAATTACATTTATTGTTCTTTTTCTTCTTACAATTTTAGAGTTAGCAGTAGCAATAATTCAAGCTTACGTCTTCACTCTACTAGTAAGCCTATATTTACATAATAATAC +>Pteropus_alecto_NC_023122 +------------ATGAACGAAAATCTATTCTCCTCTTTCATTACCCCTACA---ATAATGGGCCTTCCCATTGTTACACTAATCATTATGTTCCCAACCATGTTATTTCCATCAACTAAC---CGACTAGTAAACAACCGCCTAGTCGCGATTCAACAATGAGTTATCCACTTGACATCAAAGCAAATAATAGCAATCCATAACCAAACAGGACAAAAATGATCCCTGATACTTATATCACTCATCCTATTTATTGGATCAACAAACCTACTAGGCTTATTACCACATTCCTTCACACCAACAACTCAGCTGTCAATGAATCTAGGGATGGCCATTCCCCTGTGAGCAGGGACAGTAGCTTTAGGGTTTCGCCATAAAACCAAAGCATCCCTAGCCCACTTCCTCCCCCAAGGAACCCCAATCCCCCTGATCCCCATACTTATTGTCATCGAGACAATCAGCTTGTTTATTCAACCAATAGCCCTAGCAGTACGATTAACTGCAAATATTACGGCCGGGCACCTACTAATTCACCTCATCGGAGGAGCTACCCTAGCCCTAATAAAC---ATCAGCACAATAACGGCTCTTATCACATTCATTATCCTAATCCTGTTAACAATCCTTGAATTCGCAGTAGCCCTAATTCAAGCTTACGTATTCACGCTACTAGTAAGTCTATATTTACATGATAACACC +>Arctocephalus_townsendi_NC_008420 +------------TAATGAACGAAAATCTATTTACCTCTTTTGCTTCCCCTA---CAATAATAGGCCTCCCCGTCGTAACCCTAATTATCCTATTTCCAAGTATACTATTTCCTTCACCAG---GCCGACTGATCAACAACCGCCTCACCTCTATTCAACAGTGACTGATCCAACTAACATCAAAACAAATAATATCAATCCATAATCGCAAAGGACAAACATGGACATTAATACTTATATCGCTCATTATGTTTATTGGATCTACTAACCTACTAGGTCTGCTACCGCACTCATTCACTCCAACTACCCAACTGTCTATAAACCTAGGAATAGCCATCCCCCTATGAGCGGGAACAGTTGCTATAGGGTTACGACATAAAACTAAAGCATCCTTGGCCCATTTTCTACCCCAGGGAACACCCTCCCCTCTCGTCCCAATATTAGTAATCATCGAATCTATTAGCTTACTCATTCAACCCATAGCCTTAGCCGTACGACTGACAGCCAACATTACTGCAGGCCACTTATTAATTCACCTAATCGGCGGAGCCACTCTGGCCCTCACCA---ACATCAGTATAATTACGGCCCTTGTCACTTTCATTATCCTTATCCTACTCACAATTCTTGAGTTTGCTGTAGCCTTGATCCAAGCCTACGTCTTCACTTTACTAGTAAGCCTATACTTACACGATAACA +>Kobus_leche_NC_018603 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTAT---AATACTAGGCCTTCCCCTTGTTACCCTTATTGTCCTATTTCCCAGTTTATTATTCCCAACATCAAA---CCGACTAGTAAACAACCGTCTTATTTCCCTCCAACAATGAGCACTCCAACTTGTATCTAAACAAATAATAAATATTCACAACCCCAAAGGACAGACATGAACACTAATACTAATGTCCCTAATTCTATTCATCGGATCAACAAACCTAATAGGCCTATTACCCCACTCATTTACACCAACCACACAACTATCTATAAATTTAGGCATAGCTATTCCCTTATGAGCAGGAGCTGTAATTACAGGCTTCCGTAACAAAACCAAAGCATCATTTGCTCACTTCCTACCACAAGGAACACCTACTCCATTAATTCCAATATTAGTAATCATTGAAACTATCAGCCTCTTTATTCAACCAGTGGCCCTAGCCGTACGACTAACAGCCAACATTACAGCAGGACACTTATTAATTCACCTTATTGGAGGAGCTACTCTCGCACTAATAAG---CATTAGTACCACAACAGCCCTCATTACATTTATTATCCTAATTTTATTAACAATCCTCGAATTCGCAGTAGCCATAATCCAAGCCTATGTATTCACCTTATTAGTCAGTTTATATCTGCACGATAACAC +>Pontoporia_blainvillei_NC_005277 +------------ATGAACCAAAATCTATTTGCCCCCTTCATAACCCCAATA---CTGCTGGGTATCCCAGTTACTCTCCTGGTCATTATACTCCCTGCCATACTACTTCCAACACCAAAT---CAACTAATCAACAACCGCATAATCTCTGTCCAACAATGAATAATCAAACTCCTAACAAAACAACTAATAAGTACACACAATACCAAAGGACAAACCTGGTCTCTAATACTTACTTCCCTCTTCCTATTCATCGCCCTTACAAATCTTCTTGGAATATTGCCCCACTCATTTACACCCACCACCCAACTCTCAATAAACCTAGGCATAGCTATCCCCCTATGAGCCGGCACTGTCTTTGCGGGTTTCCGAAATAAGACAAAAATATCCCTAGCACACCTCCTACCACAAGGCACACCCACTTTCCTAATCCCTATATTAGTGATAATCGAAACCATTAGCCTATTTATCCAACCTATAGCATTAGCTGTACGACTAACAGCCAATATCACAGCAGGCCACCTATTATTACACTTAATTGGAAGTACTGTTCTCGCACTGACAAAT---ATCAACCTGCTCGCAGCTTCCATTACATTTATTATCCTTACCCTACTGACTATCCTCGAATTCGCCGTTGCCTTAATCCAAGCCTATGTGTTTACACTATTAGTAAGCTTATACCTACAGGATAACACA +>Eospalax_baileyi_NC_018098 +------------TAATGAACGAAAATTTATTCGCCTCTTTCTCTACCCCTA---CATTAATAGGAATCCCCATTGTCATTGCTATTATTATACTTCCAACTATTATATTCTCACATTCTA---ATCGTATCTACAATAACCGATTAGTAGTGTTTCAACAATGAATTGTTCAAATAATCATTAAACAAATAATGTCAATTCACTCACAAAAAGGACGCTCATGAACCCTACTACTTATCTCACTAATCATTTTTATTGGCTCAACTAATCTTCTAGGTCTTCTACCACACACATTTACCCCAACAACACAACTATCAATAAACCTAGGAATAGCAATTCCCCTTTGAGCCGGAGCAGTAATCCTAGGATTCCGCAATAAAACAAAATCCGCTCTAGCCCATTTTCTTCCCCAAGGAACACCTATCCCTTTAATCCCCATATTAATTATTATCGAAACAATCAGTCTATTTATCCAACCAATAGCCTTAGCAGTTCGATTAACCGCTAATATTACAGCCGGTCACCTACTAATCCATCTTATCGGAGGAGCAACTTTAGCTCTACTAT---CAATTAATATCCCTACAGCCTTAATTACATTTTTAATCCTAACCCTACTAACCATTCTAGAATTTGCCGTAGCACTAATTCAAGCCTACGTTTTCACTCTTCTAGTGAGCCTTTACTTACATGATAATA +>Cercopithecus_lhoesti_NC_023962 +------------AATGAACGAAAATTTATTTACCCCATTCACAACTCCAAC---AATCCTAAACCAGCCTGCCACCATCCCCATTATCCTATTCCCCATACTACTAATCCCAACATCCAA---GCACCTCATCAACAATCGACTAATTACTATTCAACATAACCTAATCCAACCCATTCTAAAACAAATAATAATCACCCACAATGCTAAAGGACAAACCTGATCTCTAATACTAGTATCCCTAATCATCTTTATTGCCATAACTAACCTTCTAGGACTTCTACCCCACTCATTTACACCTACCACCCAACTATCTATAAATCTAGCTATAGCAATCCCCTTATGAGCAGGCACAGTAATCACAGGCCTACGCTTTAAAACCAAAAATTCCTTAGCACATCTACTACCACAAGGTACACCAACTCTACTCATCCCCATACTAGTGTTGATCGAAACTACTAGCCTACTCATTCAACCAATAGCCCTAGCTGTACGCCTAACTGCTAACATTACAGCTGGTCATCTACTAATGCATTTGATTGGAAGCACTGTACTAGCACTACTAAC---CATCAACCTCCCCGTTGCCTTACTGACCTACACACTCCTAATACTACTCACCATCCTAGAAATCGCAGTTGCCCTAATCCAAGCCTACGTCTTCACACTTCTAGTTAGCCTCTACCTACATAATAACAC +>Murina_ussuriensis_NC_021119 +------------ATGAACGAAAATCTATTTGCCTCTTTTATTACCCCTACA---ATAATAGGTTTACCTGTTGTTATTTTCATTATTATATTCCCAAGTATATTATTTCCATCAGCAACG---CGGTTAATTAATAACCGTCTCATTTCCATCCAACAGTGATTAATCCGCCTAGCAACAAAACAAATAATAAATATTCACAGTAAAAAGGGCCAGACCTGGGCACTTATATTAACATCACTAATAATATTTATTGGTTCAACAAACCTATTAGGCTTACTACCCCACTCATTCACACCGACTACACAGCTATCAATAAACCTAGGCATGGCTATCCCCCTTTGGGCTGGTACAGTTATCCTCGGATTTCGTTATAAAACAAAAATATCCTTAGCGCACTTCCTACCACAAGGAACACCACTACCCCTAATTCCAATGCTAGTAATCATTGAAACAATTAGCCTGTTTATTCAGCCAATAGCCCTAGCAGTTCGACTCACAGCAAATATCACTGCAGGTCATTTACTCATCCATCTCATCGGAAGTGCTACTCTGGCACTAATAGAT---ATTAACATAACCACTGCCCTAATCACATTCTTAATTTTAGTATTACTCACAGTACTAGAGTTTGCTGTAGCCCTAATTCAAGCCTATGTCTTCACTCTACTAGTAAGCCTTTATTTACATGATAATACC +>Rhinophylla_pumilio_NC_022426 +------------TAATGAACGAAAATCTATTCACCTCTTTCATTACCCCTA---CGATAATAGGTCTTCCTGTTGTTATATTAATTATCATGTTTCCTACCATGCTATTTCCATCTACCA---AACGGCTAATTAACAACCGAATATTAGCAATTCAACAATGACTTGTCCACCTGACATCTAAACAAATACTCTCAATTCATAACCAAAAAGGACAAACATGAGCTCTAATATTATTATCTTTAATTTTATTTATTGGCTCAACTAACCTACTAGGACTCCTGCCTCATTCTTTTACACCTACGACTCAATTATCAATAAACCTTGGAATAGCAATCCCCTTATGAGCTGGAACTGTTATCCTCGGTTTTCGACATAAAACTAAAGCTTCTCTAGCACACTTTCTTCCACAGGGCACACCTTTACCACTGATTCCTATACTAATCATTATTGAAACAATTAGTCTATTCATTCAACCTTTAGCTCTAGCTGTACGACTAACTGCAAACATTACTGCAGGTCACCTATTAATTCACCTTATTGGAGGAGCAACTCTTGCTCTTATAA---ATATTAGTATAACCACTGCCTTCATTACATTTATTATTTTAGTATTGTTAACTATCTTAGAATTCGCTGTAGCTTTAATTCAAGCCTACGTATTTACTCTCCTAGTTAGTCTATATTTACACGACAATG +>Canis_latrans_NC_008093 +------------AATGAACGAAAATCTATTCGCCTCTTTCGCTGCCCCCTC---AATAATAGGTCTCCCTATTGTAGTACTGATCGTCATGTTCCCTTCCATTTTATTCCCAGCACCCAA---TCGCCTAATCAATAACCGGTTAATCTCCATTCAACAATGATTAATTCAATTAACATCAAAACAAATACTAGCAATTCACAACCAGAAGGGACGAACCTGAGCTCTCATACTTATATCACTAATTCTATTCATTGGCTCAACTAATCTACTTGGACTATTACCCCACTCATTTACACCCACAACCCAACTCTCTATAAACCTCGGAATAGCAATCCCCCTATGAGCAGGGACAGTAATTACCGGCTTCCGCTATAAGACCAAAGCATCCTTGGCACACTTTCTACCCCAAGGCACCCCTCTTCCCCTAATTCCAATACTAGTAATCATCGAAACTATTAGTCTATTCATTCAACCCATAGCTCTAGCCGTTCGATTAACCGCCAATATTACTGCAGGACACCTCCTAATCCACTTGATTGGAGGGGCTACCTTAGCTCTTATTAA---TATTAGCGCGGCCACAGCTTTTATTACTTTTATTATTTTAATCCTTCTTACGATTCTAGAATTTGCTGTTGCTTTAATTCAAGCCTATGTTTTTACCTTACTAGTAAGTCTATACTTACACGACAACAC +>Propithecus_edwardsi_isolate_RANO343_NC_026092 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAACA---ATTGTAGGAATCCCTATTGTGATCCTAATCATCGCAGTCCCTAGCATTCTCTTCCCTTCGCCCACC---CGTCTCATTTCCAACCGATTGACTTCCTTACAACAATGACTTATTCAACTAGTACTAAAACAACTAATAATGATACACAGCATTAAAGGACGAACTTGATCCCTCATACTAATTTCACTAATCCTATTTATTGGTTCAACCAACTTACTAGGTCTATTACCCCACTCATTCACCCCCACTACTCAACTATCAATGAATCTAGGCATAGCCGTCCCACTATGAGCTGCTGCAGTCATTACAGGCTTTCGTCATAAAACAAAAATATCCTTAGCTCACCTACTACCACAAGGAACGCCAGTCCCTCTTATTCCCATACTAGTAATCATCGAAACCATTAGCCTTTTCATTCAACCTATAGCATTAGCCGTACGATTGACGGCTAACATTACAGCAGGCCACCTACTCATACACTTAATTGGTGGAGCCACCTTAGTATTAACCTCA---ATTAGTCCCACCACTGCCTCAATTACATTTACTATTCTTATTCTCCTTACAATCCTTGAATTTGCCGTCGCCCTAATCCAAGCCTATGTATTTACTTTACTAGTTAGCCTTTATTTACATGACAACACC +>Mus_musculus_domesticus_NC_006914 +------------TAATGAACGAAAATCTATTTGCCTCATTCATTACCCCAA---CAATAATAGGATTCCCAATCGTTGTAGCCATCATTATATTTCCTTCAATCCTATTCCCATCCTCAA---AACGCCTAATCAACAACCGTCTCCATTCTTTCCAACACTGACTAGTTAAACTTATTATCAAACAAATAATGCTAATCCACACACCAAAAGGACGAACATGAACCCTAATAATTGTTTCCCTAATCATATTTATTGGATCAACAAATCTCCTAGGCCTTTTACCACATACATTTACACCTACTACCCAACTATCCATAAATCTAAGTATAGCCATTCCACTATGAGCTGGAGCCGTAATTACAGGCTTCCGACACAAACTAAAAAGCTCACTTGCCCACTTCCTTCCACAAGGAACTCCAATTTCACTAATTCCAATACTTATTATTATTGAAACAATTAGCCTATTTATTCAACCAATGGCATTAGCAGTCCGGCTTACAGCTAACATTACTGCAGGACACTTATTAATACACCTAATCGGAGGAGCTACTCTAGTATTAATAA---ATATTAGCCCACCAACAGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGCAGTAGCATTAATTCAAGCCTACGTATTCACCCTCCTAGTAAGCCTATATCTACATGATAATA +>Hipposideros_armiger_NC_018540 +------------AATGAACGAAAATCTGTTCTCCTCTTTCATTACCCCTAC---TATAATAGGCCTGCCTATCGTAGTTCTCATTGTCATTTTCCCTAGTATACTATTTCCCTCAACTAA---CCGACTAGTCAATAATCGACTAATCGCCATCCAACAATGGCTACTTCATATAACATCAAAACAAATGATAATAATCCACAATCATAAAGGCCAATCCTGAACTCTAATATTAATATCACTCATCCTTTTTATTGGCTCAACAAACCTTCTAGGCCTTCTTCCACACTCATTTACACCCACCACTCAACTGTCCATAAACCTAGGCATAGCCATTCCCCTATGGGCCGGGACTGTACTTCTAGGATTTCGCTATAAGACAAAAGCCTCTTTAGCCCATTTTTTACCACAAGGAACCCCTCTGCCCCTCATCCCAATACTAGTAATTATCGAAACTATTAGCCTGTTCATCCAACCAATAGCCCTCGCTGTACGACTAACAGCCAACATCACCGCCGGACATCTGCTAATTCACCTAATCGGAGGGGCTACCCTAGCTCTACTAGG---CATTAGCACAACTACAGCTTTCATCACCTTCATCATCTTAATTATATTAACCATTCTAGAATTTGCTGTCGCTCTAATTCAAGCCTATGTCTTCACACTACTAGTGAGCCTCTACCTACATGACAATAC +>Procapra_przewalskii_NC_014875 +------------ATGAACGAAAATTTATTTGCCTCATTCATTACCCCAATA---ATACTAGGCCTTCCTCTCGCAACCCTAATTGTCTTATTTCCCAGCCTATTATTTCCAACATCAAAC---CGACTGATAAATAATCGCCTTATTTCTCTTCAACAATGAGTACTTCAACTTGTATCAAAACAAATAATAAGTATTCATAACCCCAAAGGACAAACATGAGCATTAATACTAATATCTCTAATTCTATTTATTGGGTCAACAAATTTATTAGGCCTACTACCCCACTCCTTTACACCAACCACACAACTATCAATAAACCTAGGCATAGCTATCCCCCTGTGAGCAGGGGCTGTAATTACAGGCTTTCGCAACAAAACTAAAGCATCACTCGCCCACTTCCTACCACAAGGCACACCAACCCCTTTAATTCCCATGCTAGTAATCATTGAAACTATCAGCCTATTCATTCAACCAATAGCCCTCGCCGTACGACTGACAGCCAATATCACAGCAGGACATTTGCTAATTCACTTAATCGGAGGAGCTACACTTGCACTAATGAGT---ATCAGCACTACAACAGCCTTCATCACATTCATTATCTTGATCTTATTAACAATCCTCGAATTCGCAGTAGCCATAATTCAAGCTTACGTATTTACCCTTCTAGTTAGCCTATATCTACACGACAACACA +>Pteronotus_rubiginosus_NC_022425 +------------TAATGAACGAAAATTTATTCGCTTCTTTCATTACCCCTA---CGATAATAGGACTCCCTATCGTCGTACTAATTATTATATTCCCAACGATCTTATTCCCATCCACCA---ACCGCCTAATCAACAACCGCTTAGTAGCTATCCAACAATGACTAATCCATCTAACCTCTAAACAAATACTATCTATTCACAATCGAAAAGGCCAAACATGAGCCCTAATATTAATATCACTAATCCTTTTTATCGGCTCAACTAATCTACTAGGACTTCTACCACACTCATTCACCCCAACAACACAACTATCAATAAACCTCAGCATAGCTATCCCACTCTGAGCAGGCACAGTAATCCTCGGTTTCCGCCACAAAACTAAAGCCTCTCTAGCACATTTCCTCCCACAGGGAACCCCCATCCCCCTCATCCCAATACTAGTAATTATCGAGACAATCAGCCTATTTATTCAACCAGTGGCCCTGGCCGTACGACTAACAGCCAACATTACAGCAGGACACCTCTTAATCCACCTAATCGGAGGAGCTACCCTAGCCCTTATAG---ACATTAGTATGACTACCGCCTTCATCACATTTATCATTTTAATCCTATTAACCATTCTTGAATTCGCCGTAGCCTTGATCCAGGCCTACGTCTTTACCCTACTAGTAAGTCTATACCTACATGACAATG +>Pseudois_nayaur_NC_020632 +------------AATGAACGAAAATCTATTTACCTCTTTCATTACCCCTAT---AATGTTAGGCCTCCCCCTTGTTACACTCATTATTTTGTTTCCTAGCTTATTATTCCCTACGCCAAA---CCGACTAATCAACAACCGCCTCATCTCTCTCCAACAATGAGCACTTCAACTCGTATCAAAACAAATAATAAGTATTCACAACACCAAAGGACAATCATGAACATTAATATTAATATCCTTAATCCTATTCATTGGATCCACAAACTTATTAGGCCTTTTACCCCACTCATTTACACCAACTACACAACTATCAATAAATCTAGGCATGGCTATCCCCTTATGAGCAGGAGCCGTAATCACAGGCTTTCGTAACAAAACTAAAGTATCACTTGCCCATTTCCTACCACAAGGCACACCCACCCCACTAATCCCAATACTAGTAATTATTGAAACTATTAGCCTCTTCATCCAACCAATAGCCCTTGCCGTACGGCTAACAGCTAACATCACAGCAGGACACCTATTAATTCATTTAATCGGAGGGGCCACTCTTGCACTAACAAA---CATCAGCACCACAACAGCGCTCATCACATTTGTTATTTTAATTTTACTAACAATTCTTGAATTCGCAGTAGCCATAATCCAAGCCTACGTATTCACCCTCCTAGTTAGCCTATACCTGCATGATAACAC +>Prolemur_simus_NC_021959 +------------ATGAACGAAAATTTATTTGCCTCTTTCATTACCCCAACA---ATCGTAGGAATCCCTATCGTTATTTTCATCATCATAATTCCCAGCATTATTTTTCCTTCTCCTACT---CGCCTAATTAATAATCGGCTAACCTCTTTACAACAATGGTTAGTTCGATTAATCCTAAAACAACTCATATCTATCCACAGTATTAAAGGACAAACCTGATCTCTCATACTAATCTCACTTATTCTATTCATCGGCTCTACTAATCTACTAGGTCTATTACCCCACTCATTCACCCCTACCACACAACTATCCATAAATTTAGGTATAGCAATCCCACTCTGAGCAGCTACAGTAATCAAAGGTTTTCGCCACAAAACAAAAGCATCCCTAGCCCACTTCTTACCACAAGGAACGCCCATCCCTTTAATCCCTATATTAGTGATTATTGAAACCATCAGCCTCTTTATTCAACCCATAGCCTTAGCTGTGCGATTAACTGCTAATATTACAGCAGGTCACCTTCTTATACACCTAATCGGAGGAGCTACTTTAGTTCTTACTTCC---ATCAGCCCCGCTACAGCCTCAATTACATTTATCATTCTTACCCTCCTTACAATTCTTGAATTTGCTGTTGCCTTAATTCAAGCCTATGTTTTCACCCTACTAGTTAGCCTTTATTTACATGACAACACC +>Echinosorex_gymnura_NC_002808 +------------TAATGAACGAAAATCTATTTACCTCTTTTATAATTCCAA---TATTTATAGGATTGCCTGTATTCATTATTATTATCATATTCCCTTCTATTCTATTTCCTTCCCCTT---CACGTCTAATTAATAATCGCATTATCACTATTCAACAATGAATTGTTAAAATTACATCAAAACAAATAATATCAATTCATAATCAAAAAGGCCAAACATGAACCCTACTACTTATATCTTTAATTATATTTATTGGCTCAACAAATCTTCTAGGATTATTTCCTCACTCTTTCACCCCTACAACACAACTATCAATAAATCTAGGAATAGCTATTCCCTTATGAGCAGGTACAGTAATTATGGGATTCCGCTTCAAAACCAAAGCTTCATTAGCACACTTTCTTCCACAAGGAACCCCTTTAGCTCTCATTCCCATACTAGTGTTAATTGAAACAATTAGTCTATTTATTCAACCTATAGCATTAGCAGTACGATTAACAGCTAATATTACAGCAGGTCATCTACTTATTCATCTAATTGGTAGTGCCACACTAACACTTATTT---CTATTAGCCCAACTGCAGCAACATTCTCATTTATTATTCTAATTTTATTAACAATCTTAGAATTTGCAGTAGCATTAATTCAAGCTTATGTGTTTACACTATTAGTTAGCCTATATTTACATGATAATA +>Rhinopithecus_avunculus_NC_015485 +------------AATGAACGAAAATTTATTTACCCCTTTCACAACCCCAAC---GCTTCTAGGCTTGCCCGCTGTAATACCTATTATTTTATTTCCCACATTATTATTTCCAACCTCCAA---GCACCTTATTAGTAATCGACTAATTATTATCCAGCAAAATCTAATCCAACTAATTCTAAAACAAATGATAACAATTCATAATACTAAAGGACAAACCTGATCTCTAATACTCATGTCCCTAATTATCTTTATTGCTACAACAAATCTTCTAGGACTCTTACCCCACTCATTTACCCCCACCACTCAACTGTCCATAAATCTAGCTATAGCAATCCCCCTGTGAGCAGGTACAGTAATTACAGGTCTCCGCTTCAAAACCAAAAACTCCTTAGCTCACTTTTTACCACAAGGGACACCCACACCTCTTATTCCTATGCTAGTAATTATCGAAACTATTAGCTTATTTATTCAACCAGTAGCCCTAGCCGTACGCCTAACCGCCAACATTACGGCAGGACATCTACTAATACATCTAATCGGAAGTGCCACACTAGCACTATTAAC---TGCCAGTTTACTTGCAACCTCACTAACTTTAGTGCTCCTAGTATTATTAACAATTCTAGAAATAGCAGTCGCCCTAATCCAGGCCTACGTCTTTACACTCTTAGTAAGCCTTTATTTACATGATAATAC +>Cervus_nippon_centralis_NC_006993 +------------ATGAACGAAAATTTATTTACCTCTTTTATTACCCCAATA---ATCCTACGCCTTCCACTAGCTACCCTCATCGTTATGTCTCCTAGCCTATTATTTCCAACATCAAAT---CGTCTAGTAAATAACCGTCTTATCTCCCTCCAACAATGGATACTTCAACTTGTATCAAAACAAATAATAGGAATTCACAATGCCAAAGGACAAACATGGACACTAATACTCATGTCCCTAATCTTATTTATTGGATCCACAAATCTTCTGGGCTTATTACCCCACTCATTTACACCAACCACACAATTATCAATAAACCTAGGCATAGCCATCCCCCTGTGAGCAGGAGCTGTAATTACAGGTTTCCGTAATAAAACTAAAACATCACTTGCCCACTTTCTCCCACAAGGAACTCCGACCCCACTAATTCCCATACTAGTTATTATCGAAACTATTAGTCTTTTTATTCAACCAATCGCTTTAGCCGTACGACTAACAGCCAATATTACTGCAGGACACCTACTGATTCACCTAATTGGAGGAGCTGCACTTGCACTAATAAGT---ATCAGTACTACAATAGCTCTCATCACATTCATTATTCTAGTCCTACTCACAATCCTTGAGTTTGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTTCTAGTCAGCCTTTATTTGCATGACAACACA +>Sminthopsis_douglasi_NC_006517 +------------TAATGAACGAAAATTTATTTGCCCCTTTCATCTGTCCTA---GTATCATAGACATCTCCACCCTTCCCATTATTATCTTATTCCCATGTCTAATTTTCTCTGCACCTA---AACGCTGACTCCCCAACCGAATACAAATTCTTCAAATCTGACTAATCCGATTGATCACCAAACAAATAATAACAATACACAATAAACTAGGTCGAACCTGAACCTTAATACTTATATCCCTAATTTTATTTATTGCAACAACAAACCTACTAGGCCTACTCCCCTATTCATTTACCCCTACTACACAACTTTCCATAAACCTAGGTATAGCCATCCCTCTTTGAATAGGAACAGTCATCATAGGCTTTCAGAATAAACCAAAAGCTTCTCTCGCCCACTTCTTACCACAAGGCACACCTACACCCCTAATCCCAATGTTGATTATTATTGAAACAATTAGTCTTCTCATCCAACCCGTGGCACTAGCAGTACGACTCACAGCTAACATTACAGCTGGCCACCTCCTAATTCACCTAATTAGCTCAGCCGCATTAGCTCTTCTAT---CTATTAGCATCACTTTATCTTCTATTACATTCATTATCCTATTCCTTCTCACAATTCTAGAGTTCGCCGTAGCTTTAATTCAAGCCTATGTCTTTACTCTTCTAGTGAGCCTGTATCTGCACGACAATA +>Eulemur_fulvus_mayottensis_NC_012769 +------------AATGAACGAAAATTTATTTGCCTCTTTCATTACCCCAAC---AATTGTAGGAATTCCTATCGTCATCTTTATCGTTATAATTCCAAGCATTCTCTTTCCCTCCCCTAC---TCGCCTAATTAATAACCGACTAACCTCATTACAACAATGACTAATTCAGTTAATCCTAAAACAATTAATATTAATTCACAGTATCAAAGGACGAACTTGATCTCTAATATTAATTTCACTAATTCTATTTATTGGCTCTACTAATTTACTAGGCTTATTGCCCCACTCATTTACTCCTACCACACAACTATCTATAAACCTAGGCATAGCAATTCCACTCTGAGCAGCTGCGGTAATCAAAGGTTTCCGCCACAAAACAAAGGCATCCCTGGCCCACTTCCTTCCTCAAGGAACACCAATCCCTTTAATTCCTATACTAGTAATTATTGAAACCATTAGCCTCTTCATTCAACCTATAGCCCTGGCCGTACGACTAACTGCCAACATTACAGCAGGTCACCTTCTTATGCATCTAATTGGAGGGGCTACCTTAGTACTTTCTTC---CATCAGCCCTACTACAGCTTCGATCACATTCATTATCCTCACCCTTCTTACAATTCTTGAATTCGCCGTTGCTCTAATTCAGGCCTATGTATTTACCCTACTAGTTAGCCTTTACTTACATGACAACAC +>Castor_canadensis_NC_015108 +------------ATGAACGAAAATTTATTTGCCTCTTTTATTACCCCTACT---ATAATAGGACTCCCTATTGTTACCCTAATTATCCTTTTCCCAAGTATTACACTCCCAACCCCAAAC---CGATTAATTAACAACCGGTTAGTCTCTATTCAACAATGAGCAGTTAAACTAATCACCAAGCAAATAATAACAATACATAACTCCAAAGGACGTACTTGATCTTTGATGCTAATATCACTCATTATCTTCATTGGATCAACCAACCTACTCGGACTTTTCCCATACTCCTTCACCCCAACAACCCAGCTGTCAATAAATCTCGGAATAGCCATCCCACTTTGAGCAGGAGCCGTAATTCTAGGCTTCCGCCATAAAATAAAATCATCCCTAGCTCACTTTTTACCACAAGGAACCCCTATCCCCCTAATCCCAATACTAGTTATTATTGAAACTATCAGCCTGTTCATTCAACCAATAGCACTAGCCATTCGACTAACAGCCAATATCACAGCAGGCCACCTACTAATACACCTAATCAGCGGAGCCACACTAGCACTACTAACC---ATCAACCCAACCACAGCCTTCGTAACATTTATCATTCTAATCCTCCTCACAATCCTCGAATTCGCAGTAGCCCTAATTCAAGCTTACGTATTCACACTCCTAGTTAGCCTGTATCTCCATGACAACACA +>Tursiops_truncatus_NC_012059 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATAATCCCAG---TTGTACTAGGTATTCCCATTACTACCCTAATTATTATATTTCCCACCATGCTATTCCCAACACCAA---ATCGACTAATCAATAACCGCATGGTCGCTATCCAGCAATGACTTACCAAACTCACATCAAAACAACTAATAATTACACATAGCCCTAAAGGACAAACCTGATCCCTAATACTCATCTCACTTTTCCTTTTCATCGCTTCCACAAATCTTCTTGGAATATTACCTCACTCATTCACACCTACCACTCAACTCTCTATAAATTTAGGCATAGCTATTCCACTATGAGCTGGCACCGTCTTTATCGGCTTCCGTAATAAGACAAAAATATCTCTAGCTCACCTTTTACCATTAGGCACACCCACTTTCCTAATTCCTATATTGGTAATAATCGAAACTATTAGCCTATTTATTCAACCCTTAGCCCTAGCAGTGCGGCTAACAGCGAATATCACAGCAGGTCACCTACTACTACATCTAATCGGAAGCGCAACCCTTGCATTAATAA---GCATTAACCTATTCACAGCTCTCATCACATTTATTATTCTCACCCTATTAATCATCCTTGAGTTCGCTGTAGCGCTGATCCAAGCCTACGTATTTACCCTACTAGTAAGCCTATACTTGCAAGACAATA +>Megaladapis_edwardsi_NC_026088 +------------AATGAACGAAAATCTATTCACCTCTTTCATTACCCCAAC---AATCATAGGAATACCTATTATTATTCTCATCATTATAATTCCTAGCATCCTATTTCCTACTCCCAC---TCGCCTTATTAACAACCGACTAACATCTATTCAACAGTGAGTAATTCAACTAACACTAAAACAATTAATAATAAACCACAGCACTAAGGGACGAACTTGATCTCTAATACTAGTATCGCTAATCCTATTTATTGGCTCAACTAACTTGCTAGGCCTCCTACCTCACTCATTTACCCCAACTACGCAGCTATCAATGAACCTAGGCATGGCAATCCCACTCTGGGCAGCTGCAGTTATTACAGGTTTCCGCCACAAAATAAAAATATCCCTTGCCCATTTCTTACCACAAGGAACCCCCACACCCCTAATCCCAATACTTGTAGTTATTGAGACTATTAGCCTATTTATTCAACCCATGGCACTGGCTGTACGTCTAACAGCAAATATCACGGCTGGCCACCTACTTATGCATCTAATTGGTGGAGCCACCCTAGTACTTACTTC---CATTAGCCCCGCTACAGCCCCAATCACATTTATTACCCTAACTCTCCTCACCATCCTTGAATTTGCTGTAGCTTTAATTCAAGCTTATGTATTTACCCTACTAGTTAGTCTCTATCTACACGACAACAC +>Syncerus_caffer_NC_020617 +------------ATGAACGAAAATTTATTTGCCTCTTTCATTACCCCTATA---ATCCTAGGCCTCCCCCTCGTAACCCTTATCGTACTATTTCCCAGCCTACTATTCCCAACATCAAGT---CGACTAGTAAGCAACCGCCTTATTTCCCTCCAGCGATGAATGATCCAACTTGTATCAAAACAAATAATGAGTATTCACAATACCAAGGGACAAACATGAACACTGATACTAATATCCTTGATCTTATTTATCGGGACAACAAACCTACTAGGCCTATTACCCCACTCATTTACACCAACCACACAACTATCGATAAACCTAGGCATAGCCATCCCCCTATGAGCAGGGGCTGTAGTCACAGGCTTCCGTAACAAAACTAAAGCATCACTCGCCCATTTCTTACCACAAGGAACACCAACCCCACTAATCCCAATACTAGTTATTATTGAAACTATCAGCCTTTTCATTCAACCAGTAGCCCTTGCCGTACGACTAACAGCCAATATCACTGCAGGACACCTGTTAATTCACTTAATCGGAGGAGCTACACTTGCACTAATAAGC---ATCAGTACAACAACAGCTCTCATTACATTCATAATCTTAATCTTATTAACAATTCTAGAATTTGCAGTAGCTATAATCCAAGCCTACGTATTTACCCTCCTAGTCAGCCTATATCTGCACGACAACACG +>Ailurus_fulgens_styani_NC_009691 +------------TAATGAACGAAAATTTATTTGCCTCTTTCACTACCCCAA---CATTAATAGGACTCCCTATTGTGATTCTCATTATTATATTCCCAAGCATTCTTTTTCCATCATCCA---ACCGACTAACCAATAACCGACTTATTTCAATCCAACAGTGACTATTAAAGCTTACATCAAAACAAATACTATCCACTCACAACTACAAAGGACAAAGCTGAGCCCTAATACTAATATCTTTAATTCTATTTATTGGCTCAACCAACCTACTAGGCCTTCTACCTCATTCATTCACCCCAACTACACAACTATCTATAAACCTAGGTATAGCTATTCCTCTATGAGCAGGAACAGTAGTTACAGGATTCCGATATAAAACTAAAGCATCTCTAGCTCATTTCCTACCCCAAGGAACACCTATTTTCTTAATTCCTATACTTGTAATCATTGAAACTATCAGCCTATTCATTCAACCCATGGCCCTAGCTGTACGACTAACAGCCAACATTACTGCAGGCCACCTGTTAATCCATCTGATCGGAGGGGCTACCCTCGTCCTAATAA---ATATTAGTACTGTTACAGCCTTAATCACCTTTATTATTCTAGTATTACTGACTATTTTAGAATTTGCAGTAGCCCTCATTCAAGCCTACGTATTTACTCTCTTAGTAAGCCTATATCTACATGACAATA +>Callithrix_jacchus_NC_025586 +------------AATGAACCAAAATCTATTCGCTTCCTTCAATATCCCAGC---AATCCTAGGAATCCCCCTAGTAATTCTGATCATCATACTTCCCGCCACATTTATTACACCCACTAA---TAACCTAATTAACAACCGATTCTCCTCTCTTCAACAATGATTAATTCAACTCATACTAAAACAAATGATAATTACCCATTCTACTAAAGGACGAACTTGATCCCTCATGCTTATAGCCCTAATTACATTTATCGCTTTAAATAATCTCCTCGGACTCACACCCTATGCATTCACACCAACCACCCAACTATCAATAAACCTAGGCATAGCAATTCCACTATGAGCAGCAACTGTACTCATGGGGCTGCGATTTAAAACAAAACTAGCTCTAGCCCACTTCCTACCACAAGGAACACCCGTGCCACTCATCCCTATACTAATTATTATCGAAACAATTAGCCTCTTCATCCAACCAGTAGCTTTAGCTGTACGACTTACAGCCAATATTACAGCAGGCCATCTGCTAATGCATCTACTAGGTGACACTACACTAACCCTCATATC---CATCTACCTATCTTCCTCCACAATCACCATTATCATTATTATTCTGCTCATCACCCTAGAACTAGGTGTTGCACTCATCCAAGCATACGTATTCACACTCTTAGTAAGCCTATATCTACATGACAACTC +>Palaeopropithecus_ingens_NC_026090 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAACA---ATCATAGGAATCCCTATCGTCATTCTGATCGTTATAATTCCTAGTATTATATTTCCCTCATCTACC---CGCCTTATTACCAACCGACTAATCTCCTTACAACAATGACTAGTTCAACTAGTACTAAAACAACTAATGATAATACACAGCATCAAAGGACGAACCTGATCCCTCATACTAATCTCACTAATCCTGTTTATCGGCTCAACCAATTTACTGGGCCTATTACCTCATTCATTTACCCCTACCACACAACTATCAATAAACCTGGGTATAGCAATTCCACTATGAGCAGCCACGGTTTTTACAGGTTTTCGTCACAAAACAAAAGCGACCCTTGCCCATCTACTACCACAAGGAACACCCCTTCCCCTTATCCCTATGTTAGTAGTTATTGAGACTATTAGCCTTCTCATTCAACCCATAGCATTAGCTGTACGACTAACAGCTAATATTACAGCAGGTCATCTACTTATACATCTGATCGGAGGAGCTACCCTAGTATTAACCTCC---ATTAGCTCCACCGTAGCTTCGATTACATTTATTATCCTCGTCCTACTTACAGTCCTTGAATTCGCCGTCGCTTTAATTCAAGCCTACGTGTTTACTCTACTAGTAAGTCTCTATCTACACGACAATACC +>Manis_temminckii_NC_025769 +------------TAATGAACGAAAATCTATTTGCCTCTTTCCTTACCCCAA---TAATAATGGGCATTCCCATTGTTACAATTATTATTATATTCCCAATTATTATATTCCCATCACCAA---AACGACTAATTAACAATCGCATCGAATCTATACAACAATGACTTTTACAGCAAACAACTAAGCAAATAATATCCATTCACAGCTATAAAGGACAAACCTGAACCCTAATATTAATATCCCTAATTATTTTTATTGCCTCCACTAACCTACTAGGCTTACTACCCTACTCATTCACTGCCACAACTCAACTATCAATAAATCTGGGCATGGCCGTTCCTTTATGAGCAGCAACCGTAATCACAGGGTTCCGACATAAGACAAAAATATCCCTAGCCCATCTTCTACCCCAAGGTACGCCAACCCCTCTTATCCCTGTATTAGTAATTATCGAAACAATCAGTCTGCTTATTCAACCCATAGCCCTAGCAGTACGACTAACCGCTAATATCACCGCTGGCCACCTACTAATACACTTAATCGGAAGCGCAACTTTAGCTTTAATAT---CTATTAGCCTCACCGTAGCAACTCCAACCTTTATCATCCTAGTCCTACTTACAATTCTCGAGTTCGCGGTCGCATTAATTCAAGCATACGTATTTACTCTGCTTATCAGCCTTTACTTACATGATAATA +>Proedromys_liangshanensis_NC_013563 +------------AATGAACGAAAATTTATTCGCCTCTTTCATTACCCCAAC---AATAATAGGCCTACCCATTGTTGTACTCATTATCATGCTCCCACCAATACTAATAACCTCCTCCAA---ACGGCTAATCTCAAACCGCTTCCACTCATTCCAACAGTGGTTAATCAAAACTATCATAAAACAAATAATGCTAATCCACTCACCCAAAGGACGCACATGATCACTGATATTAGTATCCCTAATTATATTTATTGGCTCAACTAACCTTCTAGGACTGTTACCTCACACATTCACCCCAACAACACAACTATCAACAAACCTAGGAATAGCGATCCCACTATGAGCTGGGGCCGTTATCCTAGGCTTTCGACACAAACTAAAAGCTTCACTAGCCCACTTCCTACCACAAGGAACACCCATCTCCCTGATTCCAATACTTATCATCATTGAAACCATTAGTCTATTTATTCAGCCTATAGCCCTGGCAGTCCGTCTAACAGCCAATATCACCGCAGGCCACCTATTAATTCATCTAATCGGAGGCGCCACACTTGTTCTAACAAG---CATCAGCCCACCTACAGCTACAATTACATTTATCATCCTGGCCCTCCTAACAATCCTAGAATTTGCTGTAGCCCTAATTCAAGCCTACGTATTTACATTATTAGTAAGCCTCTACTTACACGATAATAC +>Tursiops_aduncus_NC_012058 +------------ATGAACGAAAATCTATTTGCCTCTTTCATAATCCCAGTT---ATACTAGGTATTCCCATTACTACCCTAATTATTATATTTCCCACCATGCTATTTCCAACACCAAAT---CGATTAATCAATAACCGCATGGTCGCTATCCAACAATGACTTACTAAACTCACATCAAAACAACTAATAATTACACATAGCCCCAAGGGACAAACCTGATCCCTAATACTCATCTCACTTTTCCTTTTCATCGCTTCCACAAATCTTCTTGGAATATTACCTCACTCATTCACACCTACTACTCAACTCTCTATAAATTTAGGCATAGCTATTCCATTATGAGCTGGCACCATTTTTATCGGCTTCCGTAATAAGACAAAAATATCTCTAGCTCACCTTTTACCACTAGGCACACCCACTTTCCTAATTCCCATATTAGTAATAATCGAAACTATTAGCCTATTTATTCAACCCATAGCCCTAGCAGTGCGGCTAACAGCAAATATCACAGCAGGTCACCTACTACTACATCTAATTGGAAGCGCAACCCTTGCATTAATAAGC---ATTAGTCTATTCACGGCTCTTATCACATTTATTATTCTCACCTTATTAATCATCCTTGAATTCGCTGTAGCTCTAATCCAAGCCTACGTATTCACCCTACTAGTAAGCCTATACTTGCAAGACAATACA +>Capricornis_swinhoei_NC_010640 +------------TAATGAACGAAAATTTATTTGCCTCTTTCGTTACCCCTA---TAGTACTAGGCCTTCCCCTTGTTACCCTTATTGTTTTATTCCCTAGCTTTTTATTCCCCACATCAA---ACCGACTAATTAATAACCGCCTCATCTCCCTCCAACAATGAGCACTTCAACTCATCTCAAAACAAATAATAAATATTCACAACGCCAAAGGACAAACATGAACATTAATACTAATATCCCTAATCCTATTTATTGGGTCTACAAACTTATTAGGCCTATTACCCCACTCATTTACACCAACAACACAATTATCAATAAACCTAGGCATGGCTATTCCCCTGTGAGCAGGAGCCGTAATTACAGGCTTTCGCAACAAAACTAAAACATCACTTGCTCATTTTTTACCACAAGGAACACCAACCCCACTAATCCCAATGCTAGTAATCATCGAAACCATCAGCCTTTTCATCCAACCAATAGCCCTTGCCGTACGACTAACAGCCAATATCACAGCTGGACACTTATTAATTTACTTAATTGGAGGAGCCACTCTTGCATTAATAA---ACATCAGCACCACAGCAGCATCCATTACATTTATCATCCTAATTTTACTAACAATTCTAGAGTTCGCAGTAGCTATAATTCAAGCCTACGTGTTTACCCTTCTAGTTAGCTTGTATCTGCATGATAATA +>Galago_senegalensis_NC_012761 +------------AATGAACCAAAACCTATTTGCCTCTTTCATTACCCCTAC---AATAATAGGCCTCCCTATTGTTATTCTAATCATTATGTTCCCTCTTATCCTATTCCCTGCTCCAAC---ACGACTAGTTAATAACCGTCTCACATCAATACAACAATGACTAACTCAACTAATCCTAAAGCAACTCATAACCACCCATAATACAAAAGGTCGAACCTGATCACTCATACTTATTTCACTAATTATATTCATTGGATCAACTAATCTCCTCGGCTTACTTCCCCATACCTTTACTCCCACTACACAATTATCAATAAACCTTGGCATAGCTCTCCCCCTATGAACCGCAACAGTGCTCACAGGATTTCGTCACAAAACAAAAGCATCACTAGCCCATTTCCTGCCACAAGGGACCCCTCCTCCCCTCATCCCTATATTAGTCCTTATTGAAACTATCAGCCTCTTTATTCAACCTGTAGCCCTAGCCGTACGATTAACCGCCAACATTACAGCAGGACACCTTCTTATACACTTAATTGGAGGAGCTACACTAGCACTTACATC---AATTAGCCCTGCTACAGCTTCAATTACATTCACTATCTTAATCTTACTTTCAGCACTAGAACTCGCAGTAGCCCTTATCCAAGCATACGTATTCACATTATTAGTAAGCCTATACTTACATGACAACAC +>Capra_hircus_NC_005044 +------------ATGAACGAAAATCTATTTACCTCTTTTATTACCCCTATA---ATATTAGGCCTCCCCCTTGTTACCCTTATTATTTTATTTCCTAGCTTACTATTTCCCTCATCAAAC---CGACTAATTAACAACCGCCTCATCTCTCTCCAACAATGGGCACTCCAACTCATATCAAAACAAATAATAAGTATTCATAACACCAAAGGACAAACATGAACATTAATATTAATGTCCCTAATCCTATTTATTGGATCTACAAACCTATTAGGCCTTCTACCCCACTCATTTACACCAACTACACAACTATCAATAAATCTAGGCATGGCTATTCCCTTATGAGCAGGGGCTGTAATTACAGGTTTTCGCAACAAAACTAAAGCATCACTCGCCCATTTCCTACCACAAGGAACGCCCACACCACTAATCCCAATGCTAGTAATTATTGAAACCATTAGCCTCTTTATTCAACCAATAGCCCTCGCCGTACGACTGACAGCCAACATCACAGCAGGACACTTACTAATTCACTTAATCGGAGGGGCCACCCTTGCACTAACAAGC---ATTAGTCCTACAACAGCACTCATTACATTCATTATTCTAATTCTACTAACAATTCTCGAATTCGCAGTAGCTATAATCCAAGCCTACGTATTTACTCTCCTAGTCAGCCTATACCTGCACGACAACACA +>Varecia_variegata_variegata_NC_012773 +------------TAATGAACGAAAATCTATTTGCCTCATTCACTACCCCAA---CAATCGTAGAAATCCCTATTGTTATTATTATTATAATAATTCCTAGCATTTTATTTCCTTCCCCTG---CTCGTCTTATCAATAACCGATTAACTTCTCTACAACAATGACTAATTCAACTAGTACTAAAACAACTTATAACAATCCATAATGCCAAAGGACGAACCTGATCCCTTATACTAGTTTCATTAATTTTATTTATTGCCTCCACTAACCTACTAGGCTTATTACCATACTCATTTACCCCCACTACCCAACTATCCATAAACCTAGGTATAGCAATTCCACTCTGAGCAGCTGCAGTAATTAAAGGTTTACGCCACAAAACAAAAGCATCCTTAGCCCATTTTCTACCACAAGGGACTCCCATCCCTCTAATTCCCGTAATAGTAATTATCGAAACTATCAGCCTCTTTATTCAACCAATAGCCCTAGCTGTACGATTAACTGCTAATATCACAGCAGGTCACCTTCTCATACACTTAATTGGAGGAGCCACCCTAGAACTTATCT---CTATCTTCCCTTCTACAGCCCCAGTTACACTTATTATTCTTATTCTTCTTATAATTCTTGAATTCGCTGTAGCCCTAATCCAAGCTTACGTCTTCACCCTATTAGTCAGCCTATATTTACAAGATAACA +>Apodemus_draco_NC_019584 +------------AATGAACGAAAATCTATTTGCCTCTTTTATTACCCCCTC---AGTAATAGGACTACCAATTGTAATTACCATTATTATATTCCCATCAATCTTATTCCCATCATCAGA---ACGCTTAATCAGTAATCGTCTCCATTCATTTCAACACTGACTAATTAAACTGATTATCAAACAAATAATATTAATTCATACCCCAAAAGGACGAACTTGAACCCTAATAATTGTCTCCCTAATCATATTTATTGGATCAACCAATCTTCTAGGCCTACTCCCACATACATTTACACCCACCACACAACTATCTATAAACCTTAGCATAGCTATTCCACTGTGAGCAGGAGCTGTACTTCTAGGATTTCGCCACAAACTAAAAAGCTCCCTAGCCCACTTTCTCCCACAAGGTACTCCAATTTCACTTATTCCAATACTAATTATCATCGAAACAATCAGCCTATTTATTCAACCAATAGCCCTAGCAGTACGACTTACAGCTAACATCACAGCAGGCCACCTACTGATACATTTAATTGGAGGAGCAACCTTAGTACTTATAAA---TATCAGCCCACCAACCGCTACTATTACATTTATTATCCTTCTACTTCTCACAGTACTAGAATTTGCCGTAGCCTTAATTCAAGCATACGTATTCACACTACTAGTAAGCCTATATCTACATGATAACAC +>Pelea_capreolus_isolate_South_NC_020734 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTATA---ATTCTAGGCCTCCCCCTTGTTACTCTTATTGTCCTATTTCCCAGCTTATTATTCCCAACATCAAAC---CGACTAGTAAATAACCGCCTTATCTCCCTTCAGCAATGAGCACTCCAACTTGTATCAAAACAAATAATAAGCATCCACAACCCCAAAGGACAAACATGAGCATTAATATTAATATCCCTGATTCTATTTATTGGGTCTACAAACCTAATGGGACTATTACCCCACTCATTTACACCAACTACACAACTATCAATAAACCTAGGTATAGCCATCCCCCTATGAGCAGGAGCTGTAATCACAGGCTTCCGTAACAAAACCAAAGCATCACTTGCTCATTTTCTACCACAAGGGACACCTACCCCACTAATTCCAATACTAGTAATTATCGAAACTATTAGTCTTTTTATTCAACCAGTGGCCCTTGCCGTACGACTAACAGCCAACATTACAGCAGGACATTTACTAATACACCTAATTGGAGGAGCTACACTTGCACTTATAAGC---ATTAGCACTACAACAGCTCTCATTACATTTATCATCTTAATTCTACTAACAATTCTTGAATTCGCAGTAGCCATAATTCAAGCCTACGTGTTCACCCTTCTAGTCAGCTTATATCTACATGACAATACA +>Episoriculus_fumidus_NC_003040 +------------TAATGAACGAAAATTTATTCGCCTCTTTCGCTACCCCAA---CAATAATAGGTCTCCCTATCGTAATCTTAATTATCTTATTTCCCAGCATTATATTTCCAGCCCCAA---ATCGACTAATTAACAACCGCCTTGTCGCCCTACAACAATGACTAATCCAATTAATCTCAAAACAAATAATAACAATTCACAACCAAAAAGGACAAACATGAACATTAATATTAATCTCACTTATTCTATTTATTGGCTCTACTAATCTTCTAGGACTGTTACCACACTCATTCACACCCACAACCCAACTCTCAATAAACCTAGGAATAGCAATTCCACTATGAGCAGGAGCAGTAATCACAGGCTTCCGCCATAAAACCAAAGCTTCACTAGCCCATTTCTTACCTCAAGGAACCCCTCTTCCTCTTATTCCAATATTAATTATTATCGAAACAATTAGTCTCTTCATTCAACCTATAGCACTTGCCGTACGATTAACAGCAAATATCACCGCAGGCCACCTGTTAATTCACCTTATTGGGGGAGCAACCCTTGTACTTATGA---GTATTAGCCCTATTACAGCTTTCATCACCTTTATTATTCTTGTCATACTTACAGTCCTTGAATTTGCCGTAGCATTAATTCAAGCTTACGTATTTACCCTCTTAGTAAGCCTATATCTGCATGATAATA +>Arctonyx_collaris_voucher_YP6001_NC_020645 +------------AATGAACGAAAATCTATTTTCCTCTTTCATTACCCCAAC---AATTATAGGGCTCCCCATCGTCATTATTATCATCATATTTCCAAGCATTCTATTTCCCTCACCAAA---CCGACTTGTCAATAACCGGCTAATCTCCATCCAACAGTGATTAGTACAATTAACATCTAAACAAATGCTATCCATCCATAACCAAAAAGGCCAAACTTGAGCACTAATATTAATATCCCTAATCCTGTTTATTGGCTCTACCAATTTACTAGGACTATTACCTCATTCATTCACTCCTACTACTCAACTATCCCTAAATTTAGGTATGGCTATTCCCCTATGAGCAGGAACAGTAATTGTCGGATTCCGACATAAAACAAAAGCATCCTTAGCCCACTTCCTACCACAAGGAACTCCACTCTTTTTAATTCCTATACTTGTAATCATTGAGACTATTAGCCTATTCATCCAACCAATAGCCCTGGCCGTACGATTAACAGCAAACATCACTGCAGGCCACCTATTAATACACCTGATTGGAAGTGCCACCTTGGCCCTAATAAA---TATTAGTACTACCACAGCCATAGTAACCTTTATTATTCTCATTCTCCTAACCATCTTAGAATTCGCAGTAGCCCTTATCCAAGCCTACGTCTTCACCTTATTAGTGAGCTTATATCTACATGACAACAC +>Talpa_europaea_NC_002391 +------------ATGAACGAAAATTTATTCGCCTCTTTCATTACCCCTACA---ATAATGGGATTACCTATTGTTGTCCTAATTATTATATTCCCCAGCATCATATTTCCCTCACCTAAC---CGACTAATTAATAACCGATTAGTATCACTTCAACAATGACTAATTCAACTAACGTCAAAGCAAATGATAACAATTCATAATGCAAAAGGACAAACATGAGCCCTAATACTTATATCTTTAATCCTATTCATTGGATCAACCAACCTACTAGGACTCCTACCACATTCTTTTACCCCTACTACTCAGCTCTCGATAAATCTCGGCATAGCCATTCCACTTTGAGCAGGAACCGTAATCACTGGGTTCCGCCACAAAACAAAAGCATCCCTAGCACATTTTCTACCACAAGGAACCCCACTACCACTTATCCCAATACTAATTATCATCGAAACTATTAGTCTGTTTATTCAACCAATAGCACTAGCCGTACGGCTCACTGCTAATATCACTGCGGGTCACCTACTAATTCACCTAATTGGAGGAGCCACATTAGCCTTAATAAGC---ATCAGCACTGCCACAGCCCTAGTCACATTTATTATTCTAATCTTATTAACTATTCTAGAATTCGCTGTGGCACTAATCCAAGCATATGTCTTCACCCTGCTAGTGAGCCTATACCTACATGACAACACC +>Cephalophus_spadix_isolate_SUN_NC_020695 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTA---TAATACTAGGCCTACCCCTCGTCACCCTTATCGTCTTGTTTCCCAGTTTATTATTTCCAACATCAA---ATCGACTAATTAACAACCGCCTCATTTCCCTCCAGCAATGACTACTCCAACTCATCTCAAAACAAATAATAAGCATTCATAACCCTAAAGGACAAACATGAGCACTAATACTAATATCCTTAATTTTATTTATTGGGTCAACAAACCTGTTAGGTCTACTACCCCACTCATTTACACCAACCACGCAACTATCAATAAATTTAGGTATAGCGATTCCTCTGTGAGCAGGAGCTGTCGTCACAGGCTTCCGCAATAAAACTAAAGCATCACTCGCCCACTTCCTACCACAAGGAACACCAACTCCATTAATTCCAATACTAGTAATCATTGAAACTATTAGCCTCTTTATCCAACCAGTAGCCCTTGCCGTACGACTAACAGCCAACATCACAGCAGGACACCTATTAATTCACCTAATCGGAGGAGCTACACTTGCACTAATAA---ACATTAGTACCACGACGGCCCTCATTACATTTATTATCTTAATCCTACTAACAATTCTTGAATTCGCAGTAGCCATAATTCAGGCCTATGTATTTACACTCCTAGTCAGCCTATACCTGCACGACAACA +>Lasiopodomys_mandarinus_NC_025283 +------------AATGAACCAAAATTTATTTGCCTCTTTCATTACCCCCAC---AATAATAGGCCTTCCTATTGTTGTACTTATCATTATACTTCCATCATTACTCTTGACCTCTTCCAA---ACGTCTAATCTCCAACCGCCTCCACTCATTACAACAATGATTAGTTAAACTCATTACCAAACAGATAATGTTAATTCACTCACCCAAAGGACGCACATGATCACTCATACTAGTATCCCTAACTTTATTCATTGGCTCAACTAACCTCCTAGGACTTTTACCATACACATTCACCCCAACAACACAATTATCCACAAACCTGGGCATAGCAATTCCACTATGAGCCGGAACCGTAATTCTAGGGTTCCGCCACAAGCTAAAGCCCTCATTAGCCCACTTTCTTCCACAAGGTACACCTATCTCCCTTATCCCAATACTAGTCATTATCGAGACTATCAGTCTATTCATTCAACCTATAGCCTTAGCAGTACGTTTAACAGCGAATATCACTGCAGGTCACTTATTAATCCATTTAATTGGGGGGGCCACACTAGCCCTCACAAC---CATCAACCTACCAACAGCTACAATTACATTTATCATTTTAACCCTTCTGACTACCTTAGAATTTGCTGTGGCCCTTATCCAGGCCTACGTATTTACTCTACTAGTAAGCCTCTATCTACATGACAATAC +>Oreamnos_americanus_NC_020630 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTATA---ATACTAGGCCTTCCCCTTGCTACTCTTATTGTTCTATTCCCTAGCTTACTATTTCCTTCATCAAAC---CGACTAATCAATAATCGCTTTATCTCCCTCCAACAATGAGTACTTCAACTTACATCAAAACAAATAATAAGCACCCATAGCACCAAAGGACAAACATGAACATTAATATTAATGTCTTTAATTCTATTTATTGGATCCACAAATTTATTAGGCCTACTACCCCATTCATTCACACCAACCACACAACTATCAATAAACTTAGGCATGGCTATTCCTTTATGAGCAGGAACCGTGGTTATAGGCTTCCGCAACAAAACCAAGACATCACTTGCCCACTTCCTACCACAAGGGACACCCACACCCTTGATCCCAATATTAGTGATCATTGAAACCATCAGCCTCTTCATTCAACCAGTAGCCCTCGCCGTACGATTAACAGCCAATATCACAGCAGGACACTTACTAATTCATCTAATTGGAGGAGCCACCCTCGCATTAACAAGC---ATTAGTAACATAGCAGCACTTATTATATTTATTATTCTAATTCTACTAACAATTCTCGAATTCGCAGTGGCTATAATCCAAGCCTACGTATTTACCCTTCTAGTCAGCCTATACCTACATGACAACACA +>Mus_caroli_isolate_R5231_NC_025268 +------------TAATGAACGAAAATCTATTTGCCTCATTCATTACCCCAA---CAGTAATAGGCTTACCAGTCGTTGTGACTATTATTATGTTTCCATCCATCCTATTTCCATCCTCAA---AACGCCTAATTAACAACCGACTCCACTCCTTCCAACACTGACTAATTAAACTTATTATTAAACAAATAATATTAATTCACACTCCAAAAGGACGAACATGAGCTTTAATAATCATCTCCCTTATTATATTTATTGGCTCAACAAATCTTTTAGGTCTACTACCCCACACATTTACGCCTACTACCCAACTATCAATAAACCTAAGTATAGCTATTCCACTATGAGCTGGAGCCGTGATTATAGGCTTCCGCCATAAACTAAAAAGCTCACTCGCCCACTTTCTTCCACAAGGTACTCCCATCACACTAATTCCTATATTAATTATTATCGAAACAATTAGCCTATTTATCCAACCTATAGCTCTAGCAGTCCGACTAACAGCTAACATCACCGCAGGCCATCTATTAATACACCTAATTGGAGGGGCTACACTGGTATTAATAA---ATATTAGTCCACCAACAGCTACAATTACATTTATTATTCTTCTACTGCTTACAGTATTAGAATTTGCAGTAGCATTAATTCAAGCTTACGTATTTACTCTTCTAGTAAGCCTATATTTACATGATAACA +>Propithecus_edwardsi_isolate_RANO90_NC_026094 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAAC---AATTGTAGGAATCCCTATTGTGATCCTAATCATCGCAGTCCCTAGCATTCTCTTCCCTTCGCCCAC---CCGTCTCATTTCCAACCGATTGACTTCCTTACAACAATGACTTATTCAACTAGTACTAAAACAACTAATAATGATACACAGCATTAAAGGACGAACTTGGTCCCTCATACTAATTTCACTAATCCTATTTATTGGTTCAACCAACTTACTAGGTCTATTACCCCACTCATTCACCCCCACTACTCAACTATCAATGAATCTAGGCATAGCCATCCCACTATGAGCTGCTGCAGTCATTACAGGCTTTCGTCACAAAACAAAAATATCCTTAGCTCACCTACTACCACAAGGAACGCCAGTCCCTCTTATTCCCATACTAGTAATCATCGAAACCATTAGCCTTTTCATTCAACCTATAGCATTAGCCGTACGATTGACGGCTAACATTACAGCAGGCCACCTACTCATACACTTAATTGGTGGAGCCACCTTAGTATTAACCTC---AATTAGTCCCACCACTGCCTCAATTACATTTACTATTCTTATTCTCCTTACAATCCTTGAATTTGCCGTCGCCCTAATCCAAGCCTATGTATTTACTTTACTAGTTAGCCTTTATTTACATGACAACAC +>Lepus_tolai_NC_025748 +------------ATGAACGAAAATCTATTCTCCTCTTTTATTACCCCAACA---ATAATAGGTTTACCAATCGTAATCCTAATTATTATATTCCCGACCCTTCTATTTCCTGCCCCTACC---CGACTAATCAACAACCGACTAGTCTCAGCTCAACAATGATTAGCCCAATTAATTCTAAAACAAATAATAATGATGCACTCCCCTAAAGGACGGACCTGATCCCTCATGCTAATCTCCCTAATTATATTTATTGGCTCAACTAATCTTCTAGGCCTCTTACCTCACTCGTTTACACCAACAACCCAATTATCAATAAATCTAGGGATAGCTATCCCACTATGAGCAGGAGCTGTAATTACAGGCTTCCGATATAAAACTAAAGCGTCACTAGCTCACTTTCTCCCACAAGGAACACCTGTACCCCTTATTCCTATGCTAGTAATTATTGAAACAATTAGCCTGTTCATTCAACCCATGGCCTTAGCTGTACGACTCACAGCCAACATTACAGCAGGCCACTTACTAATGCATCTTATCGGAGGCGCAGCACTCGCCCTAATCTCA---ATTAGTCCAACAACAGCCCTAATTACTTTTATTATTCTTATTCTCCTAACAATTCTAGAATTTGCTGTAGCCCTAATTCAAGCCTACGTTTTTACCCTTCTTGTAAGCCTATATTTACACGATAATACC +>Neodon_irene_NC_016055 +------------TAATGAACGAAAATCTATTCGCCTCTTTCATTACCCCTA---CAATAATAGGCCTTCCTATTGTCGTCCTCATTATCATACTTCCATCAATACTTATAACCTCCTCCA---AACGACTAATCTCAAACCGCCTCCACTTATTTCAACAATGGTTGGTCAAACTTATTATTAAACAAATAATACTAATTCACTCCCCCAAAGGACGTACATGATCACTTATATTAGTATCCTTAATCATATTCATTGGCTCAACTAACCTCCTAGGCTTATTACCTCACACATTTACCCCAACAACACAATTATCAACAAACCTAGGAATAGCAATTCCATTATGGGCTGGGGCTGTAATCCTAGGCTTCCGCCACAAACTAAAAGCCTCACTAGCCCACTTCCTGCCTCAAGGGACACCTATCTCTCTAATTCCCATGCTGATCATCATCGAAACTATCAGCTTATTTATTCAACCCATGGCCCTAGCGGTCCGTTTAACAGCCAACATCACCGCAGGCCACCTACTAATCCACCTAATCGGAGGCGCTACACTAGTCCTCACAA---GCATCAGCCCACCGACAGCTACAATCACATTCATTATTTTAGCCCTCCTCACTATCCTAGAGTTTGCCGTAGCCCTTATTCAAGCCTACGTATTTACCCTACTAGTAAGCCTCTATCTACACGATAATA +>Hylomys_suillus_NC_010298 +------------AATGAACGAAAATTTGTTCACCTCATTCATTACCCCTAT---ATTCTTAGGTATTCCAATCTTTACTTTAATTATTATATTCCCAACGCTATTCTTCCCATCACCCTC---CCGATTAATTAATAACCGAGTGATTACTATTCAACAGTGACTAATTAAATCAATTTCCAAACAAATAATATTAATTCATAACCCCAAGGGTCAATCATGAACACTTATACTTCTCTCCCTCATTCTATTTATCGGATCAACAAACCTTTTAGGACTCCTTCCTCATTCCTTTACTCCAACAACTCAATTATCAACAAACTTAGGTATAGCAATCCCCCTATGAGCAGGTGCTGTGATTTTAGGGTTTCGATTTAAAACTAAAGCATCTCTAGCTCATTTCCTCCCTCAAGGAACACCTTTAGCTCTTATTCCTATACTAATTCTAATCGAAACTATTAGTTTATTCATCCAACCTATAGCACTTGCAGTCCGACTCACAGCTAATATTACAGCTGGTCATCTTCTAATTCACCTTATTGGAGGAGCAACAATAGTCCTTACATC---AATTAGTACCCCAACCGCTACTCTCTCCTTCCTAATTCTTCTCTTATTAACTATTTTAGAATTTGCAGTTGCATTAATTCAAGCTTATGTCTTCACTCTTCTTGTAAGCCTTTACTTACATGATAACAC +>Redunca_fulvorufula_isolate_PhC12_NC_020742 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTATA---GTACTAGGCCTCCCCCTTGTCACTCTAATCGTCCTATTCCCTAGTTTGTTATTCCCAACATCAAAC---CGACTAGTAAGCAACCGTCTTGTCTCCCTCCAACAATGAGCCCTTCAACTTGTAACCAAACAAATAATAAATATCCACAACCCTAAAGGACAGACATGAACACTAATGTTAATATCTCTAATTTTATTTATTGGATCAACAAACCTACTAGGTCTACTACCCCACTCATTCACACCAACTACACAACTATCAATAAACTTAGGCATAGCCATCCCTCTATGAGCAGGGGCTGTAATTACGGGCTTTCGTAATAAAACCAAATCATCACTTGCTCACTTTCTACCACAAGGAACACCTACCCCACTGATCCCAATATTAGTAATTATCGAAACTATCAGCCTTTTTATTCAGCCAATAGCCCTCGCCGTACGACTAACAGCCAACATTACGGCAGGACACCTATTAATCCACTTGATCGGAGGAGCCACACTCGCACTAATAAGC---ATTAGTACCACAATAGCCCTCATTACATTTATCATCTTGGTCCTACTAACAATTCTCGAATTCGCAGTAGCCATAATTCAAGCTTACGTATTCACCTTATTAGTTAGTTTATACTTGCACGACAACACA +>Zaglossus_bruijni_NC_006364 +------------TAATGAACGAAAATCTATTTGCCTCATTCATTACTCCTA---CAATCTTAGGTATTTCAATTCTCCCACTTATTATAATCTTCCCATGTCTTTTATTTTCAGCCCCCA---ACCGTTGGGTCCCCAATCGTCTAGTTGCCCTTCAACTCTGGTTAATTCGCATAATTGCTAAACAAATAATGCTAATCCATAACAAACAAGGTCGAATGTGAACACTAATATTAATCACTTTAATCATATTTATTGCTTCAACAAACCTCCTCGGATTACTGCCCTACACATTTACTCCTACAACCCAACTGTCAATAAACATGGGAATGGCAATCCCCCTATGATTAGGCACAGTCCTTATGGGGTTTCGCAATAAACCTAAATCTTCACTAGCCCATTTTTTACCCCAAGGAACCCCTACCCCCCTAATTCCTATATTAATCATTATCGAAACTATCAGTTTATTTATTCAACCAGTAGCACTCGCAGTACGGCTCACTGCTAACATTACAGCAGGTCACCTCTTAATCCACCTTATCGGGTCAGCCACGCTAGCCCTATCCT---CCATCAGTCTTACAGTATCAACAATTACATTCACTATTCTTTTCCTCCTCACAATTCTAGAAATCGCTGTAGCTCTTATCCAAGCGTATGTTTTCACACTACTAGTTAGCCTATATCTACATGATAACA +>Tarsius_dentatus_voucher_SM10_NC_024052 +------------CTATGAACGAAAATTTATTCGCCTCTTTCATTACCCCTA---CAATAATAGGCCTACCAGTAGTAATATTAATTATTATATTTCCAACCATACTATACCCAACTTCAG---ACCGCCTAATTAACAATCGACTTATCTCCCTACAACAATGATTGATTCAACTAGTAACTAAACAAATAATGATAATACATAATAATAAAGGCCAAACTTGATCACTAATACTAATTTCCCTTATTCTTTTTATTGGATCTACAAACCTACTAGGCCTACTACCCCATTCTTTCACACCCTCCACTCAACTATCAATAAACCTAGGAATAGCCATCCCCCTATGAGCCGGAGCAGTAATTACTGGTTTCCGTCACAAAACTAAGGCGTCCCTAGCCCATTTCCTCCCACAAGGAACTCCAATTCCCCTAATTCCCATGCTAATTATCATTGAGACTATTAGCCTCTTTATTCAACCAATAGCTTTAGCCGTCCGACTAACCGCTAACATCACAGCAGGTCATTTACTTATACATTTAATCGGAGGAGCAACCCTGGTTCTATCAT---CAATTAGCTCCATTGCAGCATCAACTACATTTATTATTCTCATCCTACTTACCATCCTCGAAATAGCAGTAGCCCTTATCCAGGCCTATGTTTTTACACTTCTAGTAAGTCTTTACCTACATGACAATA +>Muntiacus_vuquangensis_NC_016920 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTACCCCAAT---AATTTTAGGTCTTCCACTCGCCACCCTTATTGTTATATTTCCTAGTCTATTATTTCCAACATCAAA---CCGTCTAGTTAATAACCGTCTTATTTCCCTCCAACAATGAGTACTACAACTTGTATCAAAACAAATAATAAGTATTCATAATGCTAAAGGACAAACATGGACATTAATAATTATATCCCTAATTCTATTTATTGGATCCACAAACCTCCTGGGCCTATTACCTCATTCATTTACACCAACTACACAACTATCAATAAACCTAGGCATGGCCATCCCCCTATGAGCAGGAGCTGTAATTACTGGCTTCCGCAACAAGACTAAAGCATCACTTGCCCATTTCCTCCCACAAGGAACACCAACCCCATTGATTCCTATATTAATTATTATTGAGACCATTAGTCTTTTTATTCAACCAATTGCCTTAGCTGTACGACTAACAGCCAACATTACTGCAGGACACCTGCTGATTCACCTAATCGGAGGAGCCACACTTGCACTAATAAG---CATCAGTACCACAACAGCCCTTATCACATTTATTATTCTAGTACTACTTACAATTCTTGAGTTCGCAGTAGCCATAATTCAAGCCTACGTATTTACTCTCCTAGTTAGCCTCTATCTGCATGACAACAC +>Loris_tardigradus_NC_012763 +------------ATGGACCAAAACCTATTTGCCCCATTCATTACCCCCACA---ATAATAGGTATGCCTATCGTAATTTTCATCATTATGTTCCCACTAATATTATTCTCCAACCCCACA---CGACTAATTAACAACCGGGTAACCTCCATGCAACAATGACTCATCCACCTAACCTTAAAACAACTAATATCTACTCATAACACAAAAGGACAAACCTGATCCCTAATACTTATTTCACTTATTATATTTATTGGATCAACTAACTTTTTAGGTTTACTACCTCACACATTCACACCAACCACCCAACTTTCAATAAATCTTGGGATAGCTATTCCACTATGAGCAGCCACAGTAATTACAGGCTTCCGACATAAAACAAAAGCTACCCTAGCCCATTTTCTACCACAAGGGACCCCTCCTCCATTGATCCCTATGCTGGTCCTCATTGAAACCATCAGTCTTATAATCCAACCTTTAGCTCTAGCTGTACGATTGACAGCCAACATCACAGCTGGGCACCTCCTTATACATTTAATTGGAAGCGCCACACTAGTCCTCTCATCA---ATCAGTATGACCACAGCTTCAATCACATTTACTATCCTCATTATACTCTCAATTTTAGAACTCGCAGTAGCTCTCATCCAAGCATATGTATTTACACTATTAGTTAGCCTATACTTACACGATAATACA +>Panthera_tigris_NC_010642 +------------TAATGAACGAAAATCTATTCACCTCTTTTACTACCCCAA---CAATAATAGGACTGCCTGTTGTTGTGTTAATCGTTATGTTCCCCAGCATTCTATTTCCCTCGCCTA---ACCGACTAATTAATAACCGCCTAGTCTCACTCCAACAATGATTAGTACAACTTACATTAAAGCAAATACTGATTACCCACAATTACAAAGGACAAACCTGGGCCCTAATACTTATGTCTCTCATTTTATTTATTGGGTCAACAAATCTGCTAGGTCTACTACCTCACTCATTTACTCCAACTACCCAATTATCAATAAACCTAGGCATAGCCATCCCCTTGTGAGCCGGCACCGTAATCACTGGATTCCGTCACAAAACTAAAGCATCCTTGGCCCACTTTCTACCACAAGGAACACCAGTCCCCTTAATCCCTATGCTCGTAATTATCGAAACTATCAGCCTTTTTATCCAGCCCGTAGCCCTAGCCGTACGACTCACAGCTAATATTACTGCAGGCCATTTATTAATACACCTAATCGGAGGAGCTGCTTTAGCCCTAACAA---ATATTAGTGCCCCTACTGCTTTAATTACCTTTATCATCCTCATCCTACTGACAATTCTTGAATTCGCTGTAGCTCTAATCCAAGCCTATGTTTTTACCCTACTTGTGAGCCTGTATTTACATGATAATA +>Tupaia_belangeri_NC_002521 +------------AATGAACGAAAACCTATTTGCCTCTTTCATTACCCCGAC---ATTAATAGGCCTTCCTATCGTGGTCCTAATCATTGCCTTCCCAAGCATTCTATTCCCAACTACATC---CCGACTAGTTAGTAACCGCTTAGTCGCTATCCAACAATGAGTAGTCAAACTTATCATAAAGCAAATAATAGCAATGCACAACACCAAAGGACGAACATGAGCCCTTATACTAACATCGCTAATTATCTTCATTGGGTCAACCAATCTATTAGGACTACTACCACACTCATTCACCCCCACAACCCAACTATCTATAAATCTAGGCATGGCTGTTCCCCTATGGGCCGGAGCCGTAATCTTAGGCTTCCGACACAAGCCTAAATCTTCTTTAGCCCACTTCCTCCCACAAGGAACACCTGTCCCCCTCATCCCTATGCTAATCATGATCGAAACCATTAGTCTCTTCATTCAACCAATAGCCCTAGCCGTCCGGCTAACAGCGAACATCACCGCAGGTCACTTGCTCATGCATCTTATTGGCGGGGCAACACTTGTACTAACATC---CATCAGCACACCCACGGCCATACTCACTTTTATTATCCTAGTCCTGCTAACAGTACTAGAGTTTGCAGTAGCACTCATCCAAGCCTACGTATTCACTCTGCTAGTTAGCCTGTACTTACACGACAACTC +>Symphalangus_syndactylus_NC_014047 +------------ATGAACGAAAATTTATTCGCTTCATTCGCTGCCCCTACA---ATCCTAGGCCTACCCGCCGCAGTACCAATTATTCTATTTCCCTCCCTATTAATTCCCACTTCCAAA---TACCTCATCAACAATCGATTAATTACTACCCAACAATGACTAATTCAATTGACCTTAAAACAAATAATAACATTACACAATACTAAAGGACGAACCTGATCCCTCATATTAATCTCTCTAATTATTTTTATTGCTACAACCAACCTCCTTGGCCTCTTACCCCACTCATTCACACCAACCACCCAACTATCCATAAACCTAGCCATAGCAATTCCCCTATGAGCAGGCACTGTGGCCACAGGTTTACGCCTCAAAACCAAAAACACTCTTGCTCACCTTTTACCCCAAGGCACACCTACGCCCCTCATTCCCATACTAATTATCATCGAAACTATCAGTCTATTTATCCAACCCATAGCCCTAGCCGTACGATTAACTGCAAATATTACAGCAGGTCACCTACTAATACACCTAATTGGAGCAGCCACACTAGCTCTATCAACC---ATCAGCCTACCTATAACTCCCATCATCTTCACAATCTTAGCCCTACTAACAATCCTTGAAATCGCTGTTGCTCTAATTCAAGCGTATGTCTTCACGCTCCTGGTAAGCCTCTACCTGCATGACAACACA +>Tremarctos_ornatus_NC_009969 +------------TAATGAACGAAAATTTATTTGCCTCTTTTACTACCCCAA---CGATAATAGGAGTCCCTATTGTAGTCCTAATCATTGTATTCCCAAGTATTCTATTTCCATCCCCTA---GTCGACTGATTAATAACCGTTTGATTTCTACCCAACAGTGATTAGTTCAGCTAACATTAAAACAAATACTGTCTATTCACAATTACAAGGGACAAACCTGAGCACTGATATTAATATCACTGGTCTTATTTATCGGCTCAACCAACCTTCTAGGCCTACTGCCACACTCATTTACGCCTACTACACAACTATCAATAAATTTAGGAATGGCTATCCCCTTATGAGCGGGTACAATCGTTATCGGATTCCGATATAAAACCAAAGCATCCCTAGCTCACTTCTTACCTCAAGGAACACCCTTTCCCCTAACTCCAATACTAGTAGTTATCGAAACAATCAGTCTATTCATCCAACCTATGGCCTTAGCTGTGCGTCTAACTGCCAACATCACTGCAGGTCACTTACTTATTCATCTAATTGGAAAAGCTACTCTAGCTCTAATAA---ACATCAGCATCGCCACAGCCCTCATCACTTTCTCTATTCTAGTACTACTCACTATTCTTGAACTCGCCGTGGCTCTCATCCAAGCCTATGTCTTTGCTCTACTAGTAAGTCTATACTTACATGACAACA +>Oryx_beisa_isolate_AWWP_NC_020793 +------------AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTAT---AATTCTAGGCCTTCCCCTTGTTACCCTAATCGTCTTATTCCCCAGCTTACTGTTTCCTACATCAAA---CCGACTAATTAACAACCGCCTCATTTCTCTCCAACAGTGAATACTCCAACTTGTATCAAAACAAATAATAAGCATTCACAATGCCAAGGGACAAACATGAACACTAATACTAATATCCCTAATTCTATTCATTGGATCAACAAACCTGCTAGGCCTATTACCCCACTCATTTACACCAACCACACAACTATCAATAAATCTGGGTATAGCTATTCCTCTATGAGCAGGAGCTGTCATTACAGGCTTCCGTAACAAAACTAAGGCATCACTTGCCCATTTCTTACCACAAGGGACACCAACCCCACTAATTCCAATGCTAGTAATTATTGAGACTATCAGCCTTTTCATTCAACCAATAGCCCTTGCTGTACGACTAACAGCTAATATCACAGCAGGACACTTACTAATTCATTTAATCGGAGGAGCCACCCTAGCACTAATAAA---TATTAGCACCGCAACGGCCCTTATTACGTTCATTGTCCTAATTCTACTAACAATTCTCGAGTTCGCAGTAGCTATAATTCAAGCCTACGTATTTACCCTTTTAGTCAGCCTATACTTGCACGATAACAC +>Chrysocyon_brachyurus_NC_024172 +------------ATGAACGAAAATCTATTCGCCTCTTTCGCTGCCCCCTCA---ATAATAGGCCTTCCTATTGTAATACTGATCATTATATTTCCCTCTATTTTATTTCCATCGCCCAAC---CGTCTAATTAATAATCGACTAATTTCCATTCAACAATGACTAATTCAATTAACATCAAAACAGATATTAGCTATTCACAACCAAAAAGGACAAACCTGGGCTCTTATACTAATATCACTAATTCTATTCATCGGCTCAACTAACTTACTCGGACTTTTACCTTACTCATTCACACCCACAACACAACTCTCTATAAACCTCGGAATAGCAATCCCCTTATGAGCAGGAACGGTAGTTACCGGCTTTCGCTATAAAACCAAAGCATCCCTAGCACATTTCCTACCTCAAGGTACTCCTCTCCCTCTAATTCCCATATTGGTGATTATCGAAACTATTAGTCTATTTATTCAACCCGTGGCCTTAGCCGTTCGATTAACCGCCAACATTACTGCAGGACATCTCTTAATACACCTGATCGGAGGTGCTACCTTAGTCCTTATTAAT---ATTAGTACCACCACGGCTTCTATTACCTTTATTATTTTAATTCTACTAACCATCCTGGAATTTGCCGTTGCCTTAATTCAAGCTTATGTTTTTACCTTGCTAGTAAGTCTTTACTTACACGACAACACC +>Nasalis_larvatus_NC_008216 +------------TAATGAACGAAAATTTATTTACCCCATTCACAACCCCAA---CACTCTTAGAATTACCCGTTGTAGTACCTATTATTCTATTTCCTACGTTATTGCTCCCAACCTCAA---AATACCTTATTAATAATCGACTAATTACTATTCAACAAAAACTGGTTCAACTAATCCTAAAACAAATAATAGTAATCCATAATACCAAAGGACAAACCTGATCCCTAATATTAATATCCTTAATTATTTTTATTGCCTCAACCAATTTTCTCGGACTCTTGCCCTATTCATTTACAGCTACTACCCAGCTGTCCATAAACCTAGCTATAGCGATCCCTCTATGAGCAGGTACAGTAATTACAGGTCTTCGCTTCAAAACCAAAAGCTCATTAGCCCACTTTTTACCACAAGGTACACCCACACCCCTTATTCCCGCATTAGTAATTATTGAAACTATCAGCTTATTCATCCAACCAATGGCCCTAGCCGTGCGCCTAACCGCCAATATTACAGCAGGCCATCTACTCATACACCTAATCGGAAGTGCTACTCTGGCATTATTAA---CCATTAGTCTCCTTGCAACCTCACTAACCTTAGTACTCCTAGTAATACTAACAATTCTAGAAATAGCAGTTGCTCTAATCCAGGCTTACGTTTTTACACTCCTAGTAAGCCTTTACTTACATGATAATA +>Hemiechinus_auritus_NC_005033 +------------AATGAACGAAAATTTATTTGCCTCTTTTATTATCCCTAC---ATTAATAGGCCTTCCAATAACTATTCTAATCATTATGTTTCCTAGTTTATTATTTATTAAACATAC---ACGATTAATTACTAATCGAATTATAGCATTACAACAATGAATAATCAAAAATATTACTAAACAAATAATGAGCATTCATAGTATTAAAGGCCAAACCTGAACTCTATTATTAATTTCACTAATTATATTTATTGCATCAACAAATATTTTAGGTCTCTTACCCCACACATTTACACCAACAGCTCAACTTTCAATAAATTTAGGTATAGCAATTCCTTTGTGAGCAGGAACTGTTATTTTAGGCTTTCGCCTAAAATTAAAATCATCACTAGCCCACTTTTTACCACAAGGAACACCACTACCTCTTATTCCTATACTTATTATTATTGAAACAATTAGTCTATTTATTCAACCTATAGCTCTAGCTGTTCGATTGACTGCCAATATCACAGCAGGACATTTATTAATTCACTTAATCGGAAGCGCAACACTTAACCTCATTAC---TATTTATACTTCTACAGCTATAATTACATTTATTATTCTCCTCCTATTGACTATTTTAGAAATTGCTGTAGCTCTAATTCAAGCTTATGTATTTACACTTTTAGTCAGTCTTTACTTACATGACAATTC +>Crocidura_attenuata_NC_026204 +------------ATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCAACA---ATAATAGGTCTCCCCATTGTTATCTTAATTATTATATTTCCTAGCATTATATTCCCTATTCCTAAC---CGACTTATTACAAATCGACTAACCGCTATTCAACAATGACTAATTCAATTAACATCAAAACAAATAATAATTATTCATAACCAAAAAGGCCAAACATGAACACTTATACTTATATCATTAATTTTATTTATCGGCTCAACAAATTTATTAGGACTATTACCCCACTCTTTTACTCCAACTACCCAACTCTCCATAAATCTTGGTATAGCAATCCCCTTATGAGCCGGGGCGGTAATTACTGGATTCCGATATAAGACCAAGGCATCACTAGCCCATTTTTTACCTCAAGGAACTCCCCTGCCCTTAATTCCCATATTAATTATTATCGAAACTATTAGTTTATTTATTCAACCCATAGCGTTAGCTGTACGACTTACAGCCAACATTACAGCCGGACATCTTCTTATTCATTTAATTGGAGGAGCTACACTAGTACTTTCAAAT---ATTAGTCCAATTACCGCACTCATTACATTTATTATTTTAATGATGTTAACCATCCTTGAATTTGCAGTAGCTTTAATTCAAGCCTATGTTTTTACGTTATTAGTTAGTCTCTATCTGCATGATAATACC +>Sus_cebifrons_NC_023541 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTGCCCCTA---CGATAATAGGACTACCCATTGTCACCTTAATTATTATATTCCCAAGCTTACTATTCCCAACACCCA---AACGACTCATTAATAACCGCACAATCTCAATCCAACAATGATTAATCCAACTAACATCCAAACAAATAATAGCTATTCACAACCAAAAAGGCCAAACCTGATCACTAATACTCATATCTCTAATTATATTCATCGGCTCAACAAACATCCTAGGCCTACTACCACACTCATTCACACCCACCACACAACTATCGATAAACCTGGGTATAGCAATCCCCCTATGATCAGCAACTGTACTCACAGGATTCCGCCATAAAACCAAAGCATCACTAGCCCACCTTCTACCACAAGGAACACCCGCCCCATTAATCCCTATACTCGTAATCATTGAAACTATTAGCCTATTTATTCAACCAACAGCCCTAGCCGTACGACTAACAGCCAACATTACAGCAGGACATCTATTAATTCATCTAATCGGAGGGGCCACATTAGCACTACTCA---ACATCAGCACTATAACAGCTTTTATCACATTTATTATCCTCATTCTATTAACCATTCTTGAATTTGCAGTAGCTCTGATCCAAGCTTATGTATTTACACTGCTAGTAAGCTTATATCTACACGATAATA +>Cercopithecus_diana_NC_023963 +------------AATGAACGAAAATTTATTTACCTCTTTCATAGCCCCAAC---AATTTTAAACCAACCTGCTGCAATCCTCATTATCCTATTCCCAATATTACTAATCCCAACCTCTAA---ATATCCCATTAATAACCGACTAATCACTATCCAACATAACCTAACCCAATTCACTCTAAAGCAAATAATAATCACCCACAGTACTAAAGGACAGACCTGATCCCTAATACTAACATCTCTAATTATCTTTATTACTATAACCAACCTTCTAGGACTCCTACCCCACTCATTCACACCCACCACCCAACTATCAGCAAACCTAGCTATAGCAATCCCCCTATGAGCAGGCACAGTCATTACAGGCCTTCGCTTCAAAACCAAGAGCTCCCTAGCCCATTTCCTACCACAAGGCACACCAACACTACTCATTCCAATGCTAGTAATAATTGAAACCATTAGCCTATTCATCCAACCAGTAGCCCTGGCAGTACGCCTAACCGCCAACATTACAGCCGGCCACCTGCTAATACACCTGGCTGGAAACGCTGTACTAGCACTACTAAC---CATCAGTCCCCCCGCAGCCCTGCTGACCTCTATACTCCTAACGCTACTCATCGTCCTAGAAATCGCAGTAGCCCTAATTCAAGCCTACGTTTTTACACTCCTAGTTAGTCTCTATCTACACAACAACAC +>Rattus_villosissimus_NC_014864 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAACA---GTAATGGGTCTACCAATTGTTGTAACCATCATTATATTTCCATCAATTCTATTCCCATCATCAGAA---CGCCTAATTAGCAATCGTCTACACTCATTTCAACACTGACTAATTAAACTTATTATCAAACAAATAATATTAATTCATACCCCAAAAGGACGAACCTGAGCACTAATAATTGTATCACTAATTATATTTATTGGCTCAACTAACCTCTTAGGCTTACTTCCCCATACATTTACCCCTACCACACAACTGTCCATAAACCTAAGCATAGCCATCCCCCTATGAGCAGGAGCCGTAATTTTAGGATTCCGACACAAACTAAAAAGTTCTTTAGCCCACTTCCTACCACAAGGAACACCCATTTCACTCATTCCTATACTAATTATTATCGAAACCATCAGCTTATTTATTCAACCGATAGCACTAGCAGTACGACTAACAGCAAATATCACAGCAGGCCACCTATTAATGCACCTAATTGGAGGAGCTACTCTAGTACTCATGAAC---ATCAGCCCACCAACCGCCACAATCACATTCATTATCCTTCTCCTACTTACAATGCTCGAATTTGCCGTAGCCTTAATTCAAGCCTATGTATTTACTCTCCTAGTAAGCCTGTACCTACATGATAACACA +>Phocarctos_hookeri_NC_008418 +------------TAATGAACGAAAATCTATTCACCTCTTTCGCTTCCCCTG---CAATAATAGGCCTTCCCATCGTAACCCTAATTATCCTGTTCCCAAGTATCTTATTTCCTTCACCGA---GCCGACTGGTCAACAACCGCTTCACCTCTATCCAACAGTGATTGATCCAATTGACATCAAAACAAATAATATTAATTCACAATCACAAAGGACAAACATGGACATTAATACTTATGTCACTCATTACGTTTATTGGATCCACTAACCTACTGGGTCTGCTACCACACTCATTTACTCCTACTACCCAACTGTCTATAAACCTAGGAATGGCCATCCCCCTATGAGCAGGAACAGTTATTATAGGATTACGACATAAAACTAAAGCATCCCTGGCCCACTTCCTACCCCAGGGAACACCCTCCCCTCTCATCCCAATATTAGTGATTATCGAATCCATTAGCTTACTCATTCAACCCATAGCCTTAGCCGTACGACTGACAGCCAACATTACTGCGGGTCACCTATTAATTCACCTAATCGGTGGAGCTACCCTAGCCCTCACTA---ACATCAGTATAATTACGGCCCTTATCACTTTCACTATCCTCATCCTGCTCACAATCCTCGAGTTTGCTGTAGCCTTGATCCAAGCCTACGTTTTTACCTTACTAGTAAGCCTATACTTACATGATAACA +>Hylobates_lar_NC_002082 +------------AATGAACGAAAATCTATTCACTTCATTCGCTACCCCCAC---AATTCTAGGCTTACCCGCCGCAGTACCAATTATTCTATTTCCCTCCCTATTAATCCCTACTTCCAA---ATACCTCATCAACAACCGACTAATTACCACCCAACAGTGACTAATTCAACTGACCTTAAAGCAAATAATAACGATACATAATACTAAAGGACGAACCTGATCCCTCATGCTAATCTCCCTAATTACCTTTATTGCCACAACCAACCTCCTTGGCCTCCTACCCCACTCATTCACACCAACTACCCAACTATCCATAAACCTGGCCATAGCAATCCCCCTATGAGCAGGCACAGTAGCCACAGGCTTCCGCCTTAAGGCCAAAAATACCCTTGCCCACCTTCTACCCCAGGGCACACCCACCCCTCTCATTCCAATATTAATTATCATCGAAACCATTAGCCTATTTATCCAACCCGTAGCCCTTGCTGTACGACTAACTGCAAATATTACAGCAGGTCACCTACTAATACACCTGATCGGAGCAGCCACAATAGCCTTATCAAC---TATTAGCCTACCCGCAACCCCCATCATCTTCACAGTCTTAACTCTACTAACAACCCTCGAAATTGCCGTAGCTCTAATCCAAGCATACGTCTTCACACTCCTGGTGAGCCTCTACCTGCACGACAACAC +>Meriones_unguiculatus_NC_023263 +------------ATGAACGAAAACTTATTTGCCTCTTTCATTACCCCTACC---ATAATAGGTCTGCCTGTATTTACCCTTATTATTATGCTCCCATCAATTCTATTTACATCATCAAAT---CGTCTAATCAACAATCGCTTCCACACCTTTCAAGAATGATTAACAAAATTAATCATAAAACAAATAATAACAATTCATTCACCAAAAGGACGAACCTGGTCCCTAATAATCATCTCACTAATTATATTTATTGGGTCAACAAATCTCCTAGGATTATTACCACATACATTTACTCCAACTACACAATTATCAACAAACCTAGCTATAGCTATCCCCCTATGAGCTGGAGCAGTAATTACTGGTTTCCGACATAAACCAAAAAGCTCGTTAGCCCACTTTTTACCTCAAGGAACCCCAATTCCCTTAATTCCTATACTTGTTATCATTGAAACTATTAGTTTATTCATTCAACCAATAGCACTAGCTGTTCGACTAACAGCCAATATCACTGCCGGACATCTACTTATACATTTAATTGGAGGGGCAACCATAGCGTTAACAAGC---ATTAGTACCCCCACTGCCTTAATCACTTTTATTATTTTAACTTTACTCACAGTACTGGAATTTGCTGTGGCCTTAATTCAAGCCTACGTTTTCACCTTATTAGTCAGCCTGTATCTACATGACAACACC +>Callithrix_geoffroyi_NC_021941 +------------TAATGAACCAAAATCTATTCGCTTCCTTCAATATCCCAG---CAATCTTAGGAATCCCCCTAGTAATTCTAATCATCATACTCCCTGCCACATTTATTACACCCACTA---ATAACCTAATTAACAACCGATTCTCCTCTCTTCAACAATGATTAATTCAACTCATACTTAAACAAATGATAATTACCCATTCTACTAAAGGACGAACTTGATCCCTCATGCTTATAGCCCTAATTACATTTATCGCTTTAAATAATCTCCTCGGACTCACACCCTATGCATTCACACCAACTACCCAACTATCAATAAATCTAGGCATAGCAATTCCCCTGTGAGCAGCAACTGTGCTCATGGGGCTGCGATTTAAAACAAAACTAGCTCTAGCCCACTTCCTACCACAAGGAACACCCGTGCCACTCATCCCTATACTAATTATTATCGAAACAATTAGCCTCTTCATCCAACCAGTAGCTTTAGCTGTACGACTTACAGCCAATATTACAGCAGGCCATCTGCTAATGCATCTACTAGGTGACACTACACTGACCCTCATAT---CCATCTACCTATCTTCCTCCACAATTACCATTATCATTATTATTCTGCTTATCACCCTAGAACTAGGTGTTGCACTCATCCAAGCATACGTATTCACACTCTTAGTAAGCCTATATCTACATGACAACT +>Ursus_thibetanus_mupinensis_NC_008753 +------------AATGAACGAAAATCTATTCACCTCTTTTATTACCCCGAC---GATAATGGGGGTCCCCATTGTAGTCTTAATCGTTATGTTTCCGAGCATTTTATTCCCTTCTCCCAG---TCGACTGATCGACAATCGCTTAGTGTCTATTCAACAATGACTAGTCTGGCTAACATCAAAACAAATGCTATCCATTCATAATCGTAAAGGGCAAACCTGAGCACTAATGTTGATATCCCTAATCCTATTTATTGGCTCAACTAATCTTCTGGGTCTATTGCCACACTCATTCACACCTACCACACAACTGTCAATGAATCTGGGAATGGCCATTCCCTTGTGAGCAGGTACAGTTGCCACTGGATTTCGATATAAGACCAAAGCATCCTTAGCTCACTTTCTACCTCAAGGAACACCTTTTCCTCTAATCCCTATACTTGTAATTATCGAAACAATCAGTCTATTCATCCAACCTATGGCCTTAGCCGTACGATTAACTGCTAATATTACTGCAGGTCACTTGCTTATCCATTTAATTGGAGGGGCTACTCTAGCTCTAACAAG---TATTAGCACTATTACAGCCCTCATCACCTTTATTATTCTAGTGCTACTTACTATTCTCGAGTTCGCTGTAGCCCTCATTCAGGCCTACGTCTTCACCCTGCTAGTAAGCCTATACTTACACGATAACAC +>Callorhinus_ursinus_NC_008415 +------------ATGCACGAAAATCTATTCGCCTCTTTCACTTCCCCTACA---ATAATAGGCCTCCCCATCGTAACTCTGATCATCCTGTTTCCAAGCATACTATTTCCCTCACCTAAC---CAACTAATCAGTAACCGCCTCACCTCAATCCAACAATGATTGATTCAATTAATATCAAAACAAATAATGTCAATCCACAATCACAAAGGACAAACGTGGGCATTAATACTCATATCACTTATTACATTCATCGGATCTACCAACCTACTAGGACTGTTACCACACTCATTTACTCCCACTACTCAATTATCTATAAACCTAGGAATAGCTATCCCATTATGGGCGGGAACAGTTATCGTAGGATTACGACATAAAACCAAGGCATCCTTAGCCCACTTCCTACCCCAAGGGACACCCTCTCCCCTTATCCCAATATTAGTAATTATTGAGTCTATCAGCCTACTCATTCAACCTATAGCCTTAGCCGTACGACTAACAGCCAATATCACTGCAGGCCACCTACTAATCCACTTAATCGGTGGAGCCACCCTGGCCCTTACTAAT---ATCAGCATAATCACGGCCTTTATCACTTTTATCATCCTCACTCTACTCACAATCCTTGAATTCGCTGTAGCCTTAATCCAAGCCTATGTTTTCACTCTACTAGTTAGCCTATACTTACACGACAACACC +>Pusa_sibirica_NC_008432 +------------TAATGAACGAAAATCTATTCGCCTCTTTCGCTGCCCCTA---CAATAATAGGCCTTCCTATCGTAATCCTAATTGTCTTATTCCCAAGCATCCTATTTCCATCTCCTG---ACCGACTAATCAATAATCGCCTCGCCTCAATTCAACAATGATTAATCCAATTAACATCAAAACAAATGTTGTCAATCCATAACCATAAGGGACAGACATGAGCACTTATACTTATTTCACTTATTCTATTTATTGGATCCACTAACCTGCTAGGCCTCCTACCACACTCATTCACCCCTACCACCCAACTATCCATAAACCTAGGAATGGCTATCCCCCTATGAGCAGGAACAGTCATCACAGGTTTTCGACACAAAACAAAAGCATCCCTAGCCCACTTCCTACCCCAAGGAACACCTCTACCCCTCATTCCAATACTAGTGATCATCGAAACTATTAGCCTATTCATTCAACCCATAGCCTTAGCCGTACGACTAACGGCCAATATTACTGCAGGTCACCTACTAATTCACCTAATCGGAGGGGCTACCCTCGCCCTTATAG---ACATTAGCACCGCTACAGCACTCATTACTTTCACCATCCTCATCCTACTCACTATCCTTGAATTTGCTGTAGCCCTCATTCAAGCCTATGTCTTCACACTGCTAGTAAGCTTATATCTACATGACAATA +>Anomalurus_sp_GP_2005_NC_009056 +------------AATGAACGAAAACTTATTCTCCTCCTTCATTGCCCCCTC---AATAATAGGCTTACCTATCATTATCCTAATTATCCTATTCCCAATTATCTTATTTAAAACCCCGAC---TCGACTGATAAATAATCGACTTATTTCACTACAAATATGATTAATTAAATTAGTCACAAAACAAATAATAACAATTCATAACAAAAAGGGGCAAACCTGATCCTTATTATTAATGTCCTTAATTACATTCATTAGCTCAACCAACTTACTCGGCCTCTTACCCTATTCATTTACCCCTACAACCCAACTATCAACTAACCTAGCCATAGCCATTCCCCTATGAGCCGGGACCGTATTAGTTGGCTTCCGACACAAAACTAAATCATCATTAGCCCACTTCTTACCCCAAGGCACCCCTACCCCATTAATCCCTATACTAATTGTAATCGAAACAGTTAGCTTATTAATTCAACCAATAGCCTTAGCCGTACGACTCACAGCCAACATTACAGCTGGGCATCTACTCATACATTTAATTGGTAGCGCAACACTAGGACTTATAAC---TATCAGCCTACCAACTGCTACAATTACACTAATTCTATTAATTCTGCTAACAGTATTAGAACTGGCCGTAGCCTTCATCCAAGCTTATGTATTTACCCTACTAGTTAGCCTATACCTACATGATAACAC +>Vespertilio_sinensis_NC_024558 +------------ATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAACA---CTAATAGGATTACCCGTCGTTATTATCATTATCATGTTCCCTAGTATTTTCTTCCCGTCAACAACC---CGTCTAATTAGTAATCGCTTAATTGCAATACAAAAATGACTTATCCGCCTAACCACAAAACAAATAATGGCCATTCATAGCAAAAAGGGTCAGACCTGGGCCCTAATACTAATATCCCTGATCATATTTATTGGGTCAACAAACCTAATTGGCCTATTACCTCATTCTTTCACCCCAACCACCCAATTGTCTATAAACCTTGGAATAGCTATTCCCCTTTGAGCAGGTACAGTAATTTTAGGCTTCCGCCACAAAACTAAAGCATCTCTGGCACATTTTCTCCCCCAAGGTACCCCATTACCCCTAATCCCCATGTTAATTATCATTGAGACGATTAGTCTATTTATTCAACCTATAGCCCTCGCTGTACGACTTACAGCAAATATTACCGCTGGGCACTTGTTGATTCACCTAATCGGAAGTGCAACTCTCGCTTTAATAGAT---ATTAGTATAACAACTGCTCTGATTACATTTATTATTCTTGTATTATTAACAGTATTAGAATTTGCCGTTGCCCTCATTCAAGCCTATGTATTTACCCTATTAGTAAGCCTCTATTTACACGATAATGCC +>Eudorcas_rufifrons_isolate_AWWP5812_NC_020702 +------------TAATGAACGAAAATTTATTTGCCTCTTTCATTACCCCTG---TAATCCTAGGCCTTCCTCTCGCTACCCTCATTGTCTTATTTCCTAGCCTATTATTTCCAACATCAA---ATCGACTAATAAATAACCGCCTTATCTCCCTCCAACAATGAGCACTCCAACTTGTGTCAAAACAAATAATGAGTATCCATAACCCTAAAGGACAAACATGAGCACTAATATTAATATCCTTAATTATATTTATTGGATCAACAAACCTACTAGGCCTACTACCCCACTCTTTTACACCAACCACACAACTATCGATAAACCTAGGCATAGCTGTCCCCTTATGAGCAGGGGCTGTAATCACAGGTTTTCGCAACAAAACTAAAGCATCACTTGCCCACTTTTTACCACAAGGAACACCTACTCCCCTAATTCCTATACTAGTAATTATCGAAACTATTAGCCTATTTATTCAACCAGTAGCCCTAGCAGTACGATTAACAGCCAACATTACAGCAGGACATCTGTTAATTCATCTAATTGGAGGAGCCACATTAGCACTAATAA---GCATTAGCACTACAACAGCTCTTATTACATTCATTATTCTAATCCTACTAACAATTCTTGAATTCGCAGTAGCCATAATCCAAGCTTACGTATTCACCCTTCTAGTCAGCCTATACTTACACGATAACA +>Tragelaphus_oryx_isolate_PHC13_NC_020750 +------------AATGAACGAAAACCTATTTGCCTCTTTCGCTACCCCAAT---AATCTTAGGCCTCCCCCTTGTAACTCTCATCGTCTTATTTCCTAGCCTACTATTTCCAACATCAAA---TCGACTAGTAAATAACCGCCTCATCTCCCTCCAACAATGAGCACTCCAACTTGTATCAAAACAAATGATAGCTATTCACAATACTAAAGGACAAACATGAGCACTAATATTAATATCTCTAATCCTATTCATCGGGTCAACAAATCTACTAGGTCTCCTACCTCACTCATTTACACCAACCACACAACTATCAATAAACCTAGGTATAGCCATCCCCCTATGAGCAGGAGCTGTCATCACAGGATTTCGCAACAAAACCAAAGCATCGCTCGCTCACTTCTTGCCACAAGGGACACCAACCCCACTAATCCCAATACTAGTTATCATCGAAACCATCAGCCTTTTTATCCAACCAGTGGCTCTTGCCGTACGACTAACAGCCAACATTACTGCAGGTCACTTACTAATTCACCTGATCGGAGGAGCTACACTCGCACTAATAAA---CATTAGTACCACAACAGCTTTCATCACATTTATTATCCTAATCCTGCTAACAATCTTAGAATTCGCAGTAGCCATAATTCAAGCCTATGTATTTACCCTCTTAGTTAGCCTATACTTACACGACAACAC +>Macrotis_lagotis_NC_006520 +------------ATGAACGAAAATTTATTTGCCCCATTCATCACCCCTTCT---ATCATAGGTATTACAACACTGCCTATCATTATATTTTTTCCATGCCTTATTCTATCAACCCCTAAA---CGATGACTACCAAACCGAATCCAAACTCTACAAATCTGACTAATTCGGCTAATTACTAAACAAATAATGACAATACATAATAAACGAGGACGATCATGAACACTTATACTAATATCACTGATTTTATTTATTGCTTCCACCAATCTTCTAGGATTATTACCATATTCATTTACTCCAACTACTCAATTATCAATAAATATTGGAATAGCAATCCCATTATGAATAGGCACAGTAGTAATAGGATTTCGAAATAAACCAAAAACATCTCTTGCACATTTCCTACCACAAGGAACACCTACACCTCTAGTTCCAATATTAATTATCATTGAAACTATTAGCTTATTTATTCAACCATTAGCATTAGCTGTGCGATTAACAGCCAATATCACTGCGGGGCATCTTCTTATTCACCTCATTGGATCAGCCACATTATCACTAGCCTCA---ATTAGCATTATGGTATCTACCATTACATTTATCATTTTATTTCTACTTACTATTCTAGAACTGGCTGTAGCTATAATTCAAGCATACGTATTCACCCTATTAGTAAGCCTATATCTACATGATAATTCA +>Meles_meles_NC_011125 +------------ATGAACGAAAATCTATTTTCCTCTTTCATTACCCCAACA---ATAATAGGACTCCCTATTGTTGTTATAATCATTATATTCCCAAGTATTCTATTCCCCTCACCGAAT---CGACTAATCAATAATCGATTAATCTCTATCCAACAGTGACTAGTACAACTAACATCCAAGCAAATGCTGTCCATCCACAACCAAAAAGGTCAAACTTGAGCACTAATATTAATATCCTTAATCCTATTTATTGGCTCTACCAATTTACTAGGTCTATTACCTCACTCATTTACCCCTACTACTCAACTGTCCCTAAACTTAGGTATAGCTATCCCCCTATGGGCAGGAACAGTAATTGTTGGGTTCCGACATAAAACAAAGGCATCCTTAGCCCACTTCCTACCACAAGGAACACCACTACTTCTAATTCCTATACTTATTATCATTGAAACTATTAGCCTATTCATCCAACCAATAGCCCTAGCCGTGCGATTAACAGCAAATATTACTGCAGGTCACCTATTGATTCATCTGATTGGAAGTGCCACTTTAGCCCTAATAAAC---ATTAGCACTGCCACAGCCATAGTAACCTTTATTATCCTAATTCTTCTAACCATCCTAGAATTTGCAGTAGCCCTTATCCAAGCCTACGTCTTCACCTTATTAGTAAGCTTATATCTACATGACAACACT +>Sciurus_vulgaris_NC_002369 +------------TAATGAACGAAAATTTATTTGCCTCTTTCATTACCCCTA---CACTAATAGGACTTCCTATTATTATTCTTATCATTGCATTTCCTAACATCCTATTTCCTTCTCCAA---ATCGACTTATTAACAACCGCTTAGTCTCATTCCAACAATGACTAATTCAACTAGTACTTAAACAAATAATGACCATACATAACCTGAAAGGACGAACATGATCTTTAATATTAATCTCTTTGATTATATTTATTGGGTCAACTAATCTATTGGGTTTACTCCCACACTCATTTACACCAACCACACAACTATCTATAAACTTAGGCATAGCCATTCCCTTATGGGCAGGAGCTGTAATCACAGGCTTTCGACACAAAACCAAAGCTTCTCTAGCTCACTTTCTACCCCAAGGTACACCAATCCCCCTCATTCCTATACTTGTAATTATCGAAACAATTAGCCTTTTTATTCAACCCATGGCCCTAGCTGTTCGACTCACTGCCAACATTACAGCTGGACATCTGCTCATACACTTAATTGGAGGCGCTACATTAGTCTTAACTT---CTATTAGCACACCCACTGCAATAATCACATTTATCATTCTAGTTCTTCTTACAGTCCTTGAATTCGCTGTTGCTTTAATCCAAGCATACGTATTTACTCTCCTTGTTAGCCTGTACTTACACGACAACA +>Balaenoptera_edeni_NC_007938 +------------ATGAACGAAAATTTATTTGCCCCTTTTATAATCCCAATA---ATACTAGGCATTCCTATCACCACTCTAATCATCATTCTCCCATCTATCTTATTTCCTACACCAAAT---CGTCTAATCAACAACCGTACGATCTCCATTCAACAATGATTAACCAAGCTCACATCAAAACAACTAATAAATGTACACAGTCCTAAAGGACAAACTTGATCTCTAATACTCATTTCACTGTTCCTATTTATTGCCTCCACTAATCTCCTTGGAATATTACCCCACTCATTTACACCCACCACACAACTTTCAATGAACATAGGAATGGCTATCCCCCTATGGGCTGGTACCGTTGCCACAGGTTTTCGCAACAAAACAAAAATATCCTTAGCCCACTTACTACCACAAGGCACACCCACCTTTCTTATTCCTATGCTAGTAATCATTGAAACCATCAGTCTATTTATCCAACCAGTAGCACTAGCCGTACGACTAACTGCCAATATCACAGCAGGCCACTTACTAATACACCTGATCGGAGAGACAACCCTTGTACTAATAAAC---ACCAGCCTATTTACAGCCCTTATCACTTTCACCATCCTTGCTCTATTAACCATTCTTGAATTTGCTGTCGCCCTTATTCAAGCTTACGTATTTACTCTTTTAGTAAGCCTATACCTTCACGATAATACA +>Pongo_abelii_NC_002083 +------------TAATGAACGAAAGTCTATTTACCCCATTCATTACCCCCA---CAGTACTAGGCCTCCCCGCCGCAGTACTAGTCATCTTATTTCCCCCCTTACTGATCCCCACCTCCA---AACATCTCATCAACAACCGACTAATTATTATCCAACAATGACTAATCCGACTCATCCTAAAACAAATAATAACCACCCATAACGCTAAAGGACGAACTTGATCCCTCATACTAACGTCCCTAATCATTTTCATCGCCTCAACCAACCTCCTAGGACTCCTCCCCTACTCATTTACACCAACCACCCAACTATCCATAAATTTAGCTATAGCAATTCCCTTATGAGCAAGCACGGTAGCTATGGGCCTTCGCTTCAAAGCCAAAATTACCCTAACCCACCTCTTACCACAAGGTACCCCCACACCTCTCATCCCTATACTAATTATTATTGAAACCGTCAGCCTTTTCATTCAACCACTAGCCTTAGCCGTACGCCTAACTGCTAACATCACTGCAGGCCACCTACTCATGCACCTAATCGGAAGCTCTGCACTAGCTATACTAG---CCATCAACCTCCCCCTAACCCTCATCACCCTTACAATCTTAACCCTGCTAACAATCCTGGAGACTGCCATCGCCCTAATTCAAGCCTACGTCTTCACACTTCTAGTAAGCCTCTACCTGCACGACAACT +>Glis_glis_NC_001892 +------------AATGAACGAAGAGTTATTTGCCTCTTTCATTACACCAAC---ATTAACAGGCCTCCCTGTCGTAATCCTAATTATTCTATTCCAGGGGATTTTATTTCCCTCATCTAA---TCGCTTAATTAATAATCGCTTAATCTCATTTCAACTATGCTTACACAACTGATTCTTAAAACAAATGATAACAATACATAATAATAAAGGACGAACATGATCTCTAATATTAGTTTCTCTAATTATATTTATTGGCTCAACTAATCTTCTAGGTCTTTTACCTCATACTTTTACCCCAACTACACAATTATCAATAAACCTAGGTATAGCAATCCCACTCTGAGCAGGTGCAGTAATTACTGGGTTTCGACATAAACTAAATCAATCCCTAGCCCATTTTCTACCTCAAGGGACACCAATTCCTCTAATTCCAATACTCATTATTATTGAGACTATTAGTCTATTTATTCAACCTATGGCCCTAGCAGTTCGACTTACAGCTAATATCACAGCTGGACATCTACTAATACACCTAATTGGAGGTGCAACTCTAGTCTTAACATC---TATCAGTCCCCCAACCGCTATAATTACGTTTATTATCCTTATCCTCCTTACTATTCTAGAATTCGCTGTAGCATTAATTCAAGATTATATATTTAATATTCTAGTTAGCATTTATTTACACGATAATAC +>Ceratotherium_simum_NC_001808 +------------CATGAACGAAAACTTATTTACCTCTTTCGCTACCCCAAC---AATCATAGGACTACCTATTGTTATCCTAATTATCATATTTCCCAGCATCATATTCCCCTCACCTAA---TCGACTAATTAACAACCGCCTAGTCTCCACCCAACAATGACTCCTTCAACTCACATCAAAACAAATATTATCTATCCACAACAACAAGGGTCAGACTTGAGCACTAATACTCATATCTCTTATCTTATTTATCGGCTCAACCAACCTGCTAGGCCTACTACCACACTCATTCACACCCACTACTCAACTATCAATAAACCTAGGCATAGCCATCCCCTTGTGAGCAGGGACGGTGTTTCTAGGCTTCCGCCATAAGACCAAAGCATCCCTAGCCCACTTCCTCCCCCAAGGAACACCTGTCTTCCTCATTCCTATACTAGTAATCATTGAAACCATCAGCCTATTTATTCAACCCGTAGCCCTAGCTGTACGATTAACAGCCAACATTACTGCCGGACACCTTTTAATGCACTTAATCGGAGGAGCAACACTAGCTCTAATAAA---CATCAGCCCTACCACGGCTCTTATCACATTTATTATTCTCATCTTACTCACTATTCTTGAGTTCGCCGTAGCCCTGATTCAAGCCTACGTGTTTACTCTTCTAGTAAGCCTCTACCTACATGACAACAC +>Halichoerus_grypus_NC_001602 +------------ATGAACGAAAATCTATTCGCCTCTTTCACTACCCCTACA---ATAATAGGTCTTCCTATCGTAATCCTAATTGTCCTATTCCCAAGCATCCTATTTCCATCTCCCGAC---CGACTAATCAATAATCGCCTCACCTCAATTCAACAATGATTAATCCAATTAACATCAAAACAAATGTTGTCAATCCATAACCATAAAGGACAGACATGAGCACTTATACTTATTTCACTTATTCTATTTATTGGATCCACTAACCTGCTAGGCCTCCTGCCTCACTCATTCACCCCTACCACCCAACTATCCATAAACTTAGGAATGGCTATCCCCCTGTGAGCAGGAACAGTAATCACAGGTTTTCGACACAAAACAAAAGCATCCCTAGCCCACTTCCTACCCCAAGGAACACCTCTACCCCTCATTCCAATACTAGTGATCATCGAAACTATTAGCCTGTTCATTCAACCCATAGCCTTAGCCGTGCGACTAACGGCCAATATTACTGCAGGTCACCTACTAATTCACCTAATCGGAGGAGCTACCCTCGCCCTTATAGAC---ATTAGCACCACTACAGCATTCATTACTTTCATCGTCCTTATCCTACTCACTATCCTTGAATTTGCTGTAGCCCTCATTCAAGCCTATGTCTTCACACTGCTAGTAAGCTTATATCTACATGACAATACC +>Dasypus_novemcinctus_NC_001821 +------------TAATGAACGAAAACCTATTTGCCTCATTCGCTACCCCTA---CCATAATAGGCCTGCCAATCATCATATTAATCATCATATTCCCAAGTATTCTTTTCCCTACCCCTA---AACGGATAATTACCAACCGAGTGGTATCAGTCCAACAATGATTAATCAACATGATCATAAAGCAAATAATGAATATTCACAACAACAAAGGACGAACATGAACTCTTATATTAATCTCTCTCATCACATTCATCGGCACTACCAACCTACTAGGCCTATTACCACACACTTTTACACCCACCACACAACTCTCTATAAACTTAGGCATAGCTATTCCATTATGAGCAGGCGCAGTAGTAACAGGCTTCCGACATAAAACCAAAGCCTCACTAGCACACTTCCTACCACAAGGCACACCAATTCCACTGATTCCCATACTAATTATCATTCAAACCATCAGCCTGTTTATTCAACCAATAGCCCTAGCTGTCCGACTCACAGCAAACATCACAGCAGGACACCTTCTAATCCATCTAATTGGAGGAGCCACATTAGCCTTAATAT---CAATTAGCCCAACAACAGCCTCAATCACATTTATCATCTTAATTCTACTAACAATTCTAGAATTCGCAGTAGCCCTAATTCAAGCATACGTCTTCACACTACTAGTAAGCCTGTACTTACATGACAACA +>Artibeus_jamaicensis_NC_002009 +------------AATGAACGAAAATTTATTCGCCTCTTTCATTACCCCTAC---GATAATAGGTCTCCCTATTGTTATCCTAATTATTATATTTCCCACTATCATATTTCCATCAACTAA---TCGATTAGTTAATAATCGGTTAGTGGCAATCCAACAATGATTAGTTTACTTAACCTCTAAACAAATACTCTCTATCCATAATCGTAAAGGCCAAACATGAGCCCTAATACTAATATCTCTCATTTTATTTATCGGCTGCACAAATCTGCTAGGCCTACTACCACACTCTTTTACTCCAACAACACAACTATCAATAAACCTAGGTATAGCTATCCCCTTATGAGCTGGAACAGTAATTCTAGGATTTCGACATAAAACCAAAGCCTCCCTAGCACACTTTCTCCCACAAGGAACTCCCTTACCACTAATTCCAATATTAATTATTATCGAAACTATTAGCTTATTTATTCAACCTATAGCATTAGCCGTACGACTTACCGCTAATATCACTGCTGGCCACTTACTAATTCATCTAATTGGCGGTGCTACCCTAGCTCTTATAAA---TATCAGTACAGCCACCGCCCTTATTACATTCATAATTCTAGTCCTACTAACTATCCTAGAATTTGCTGTAGCTCTAATCCAAGCTTATGTCTTTACCTTATTAGTTAGTCTATACCTACATGATAATGC +>Balaenoptera_musculus_NC_001601 +------------ATGAACGAAAATTTATTTGCCCCTTTTATAATCCCAGTA---ATATTAGGTATTCCTATTACCACTCTAATCATTATTCTCCCATCTATCTTATTCCCCGCACCAAAT---CGACTAATCAACAACCGTACAATCTCCATCCAACAATGATTAACTAAACTCACATCAAAACAACTAATAAGTGTACACAGTCCTAAAGGACAAACTTGATCTCTAATACTCATCTCACTGTTCCTATTTATTGCCTCCACTAATCTCCTTGGAATATTACCTCACTCATTCACACCCACTACACAACTCTCAATAAATGTAGGAATGGCTATCCCCCTATGAGCCGGTACTGTTGCCACAGGCTTCCGTAACAAAACAAAAATATCCTTAGCACACTTACTACCACAAGGCACACCTACTTTTCTTATTCCTATGCTAGTAATTATCGAAACCATTAGTCTATTCATTCAACCAGTAGCACTAGCCGTACGACTAACTGCCAACATCACAGCAGGTCACTTACTAATACATCTAATTGGAGAAACAACCCTTGTACTAATAAGT---ACCAGCCTATTTACAGCCATTATCACTTTCACTATCCTTGCTCTACTAACCATTCTTGAATTTCGTGTCGCCCTCATTCAAGCTTACGTATTCACCCTCCTAGTAAGCCTATACCTTCATGATAACACA +>Ovis_aries_NC_001941 +------------TAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCTA---TAATATTTGGTCTCCCCCTCGTTACCCTCATTGTTTTATTCCCTAGCCTATTATTTCCCACATCAA---ACCGACTAGTCAACAACCGCCTCATCTCCCTCCAACAGTGAATACTTCAATTAGTATCAAAACAAATAATGAGCATTCATAATACCAAAGGACAGACATGAGCATTAATGCTAATGTCCCTAATTTTATTTATTGGATCTACAAACCTACTAGGCCTCCTACCCCACTCATTTACACCAACTACACAACTATCAATAAACCTAGGCATGGCCATTCCTTTATGAGGAGGAGCTGTAATTACAGGCTTCCGCAACAAAACTAAAGCTTCACTCGCCCATTTCCTACCACAAGGGACACCCACCCCACTGATCCCAATACTAGTAATTATTGAAACCATCAGCCTATTTATTCAACCAGTAGCCCTTGCCGTACGATTAACAGCTAATATCACGGCAGGACACTTACTAATTCACCTAATTGGAGGAGCCACCCTTGCACTAATAA---GCATTAATACCACAACAGCACTCATCACATTCATTATCCTAATTTTACTAACAGTTCTCGAATTCGCAGTGGCTATAATTCAAGCCTATGTATTTACCCTTCTAGTTAGCTTATACCTGCATGATAACA +>Cavia_porcellus_NC_000884 +------------CAATGAACGAAAACCTATTTGCCTCTTTCATTACACCTA---CATTAATAGGACTACCTATTGTAACCATCATTATTATGTTCCCCATTATTCTTTTTCCCTCCCCCA---CACACTTAATCAATAATCGCCTAATCACTATTCAACAATGATTAGTTAAATTAGTCTTAAAACAAATGATGTCAATACATAACATCAAGGGACGTACTTGATCGCTGATATTAACCTCCCTCATTTTATTTATTGGGTCCACCAACCTGTTAGGCCTATTACCCCACTCCTTTACCCCCACTACTCAGCTATCAATAAATCTAGCTATAGCCATCCCACTATGAGCAGCAACTGTAATCTTAGGTTTCCGGTATAAAATAAAAGCATCCCTAGCCCACTTCCTCCCACAGGGAACACCCGGACCACTAATTCCAATACTAATCCTAATTGAAACCATCAGTCTATTCATCCAACCAATTGCCCTGGCAGTCCGCTTAACCGCTAATATTACCGCCGGACACCTCCTCATGCACCTAATTGGAGGTGCCACACTAGTCCTAACCA---CTATCAGCACTCCTACAGCTCTAATCACATTCATCATTTTACTCCTGCTAACAATACTAGAAATTGCCGTAGCAATAATTCAAGCTTACGTGTTCACCCTACTAGTAAGCCTATACCTTCATGATAACT +>Spalacopus_cyanus_voucher_DG657_NC_020660 +------------AATGAACGAAAATCTATTCTCCTCTTTTATCACACCGAC---AATATTAAGTATGCCAATTGTGATTCTTATTATTATGTTCCCTGCTATACTATTCCCCAACCCAAA---ACGACTAATTAATAATCGAGTAATTGCTCTCCAACAGTGTCTAGTTAAACTAATCCTAAAACAAATAATGTCAATACACTCCACTAAAGGACGAACTTGATCTTTAATATTAATTTCACTAATCCTTTTCATTGGCACAACTAACTTACTAGGTCTATTGCCCCACTCCTTCACCCCCACTACCCAATTATCTATAAACCTAGGAATAGCTATCCCTCTTTGAGCAGGAGCTGTAATTCTAGGCTTCCGACATAAGACAAAAATATCTTTAGCCCACTTTCTCCCTCAAGGCACACCTATTCCCCTCATCCCCATACTAATTGTAATTGAAACAATTAGTTTATTTATTCAACCTATAGCCTTGGCAATTCGCCTAACTGCTAATATTACTGCCGGCCACTTATTAATACATCTAATTGGGGGAGCAACCTCCGCCCTACTTAC---AATTAGCCCCCCAGCAGCTTTAATAACATTTATCATTCTCCTACTTTTAACTATTCTTGAATTTGCCGTGGCATTAATCCAAGCTTATGTATTTACACTACTAGTTAGCCTCTACCTACACGACAATAC +>Ctenomys_leucodon_NC_020659 +------------ATGAACGAAAATTTATTCTCCTTTTTTATCACACCAACT---CTAATAGGCATGCCTATTATCATTTTAATTATTATATTCCCCATTATCCTATTTCCTAGTCCCAAG---CAATTAATTAATAATCGAGCAACAACCTTTCAACAATGACTACTAAAACTCATCCTAAAACAGATAATATCAATGCATAACATCAAGGGACGAACTTGAGCCCTTATACTAATTTCCCTGATACTGTTTATTGGTACAACTAATCTATTAGGGTTATTACCCTATACATTTACCCCAACTACACAACTATCAATAAATTTAAGTATAGCTATTCCTTTATGAGCCGGAACTGTTATCTTAGGATTCCGCTATAAAACAAAAATATCCTTAGCCCATTTCCTTCCACAAGGAACCCCTACCCCCTTAATTCCAATACTCACTATCATTGAGACAATCAGCTTATTTATTCAGCCTTTAGCATTAGCAGTCCGTTTAACCGCTAACATTACTGCAGGACATTTACTAATACATCTCATTGGAGGAGCAACATCAGCCCTGCTCTCT---ATTAGCTTTCCTACTGCAATAATTACATTCATTATTCTTTTATTATTAACAATTCTTGAATTCGCTGTAGCATTAATTCAAGCATATGTTTTCACCCTACTAGTGAGTCTCTACTTATATGATAATACT +>Orycteropus_afer_NC_002078 +------------TAATGAACGAAAATCTATTTGCCTCATTCGCTACACCTA---CACTAATAGGCCTCCCTGTAGTCCTCCTCATTATTATATTCCCAATACTCCTATATCCACCATCAA---ATCGACTAATCACCAATCGTTTATCAGCAATCCAACAATGATTAGTTAAGCTGATCCTAAAACAACTAATATCTATCCATAACACAAAAGGCCGAACATGATCTTTAATATTAATTTCACTAATTCTTTTTATCGGGTCAACAAACCTATTAGGCCTATTACCTCACTCCTTTACACCTACCACCCAATTATCAATAAACCTAGGAATAGCCATCCCTTTATGAGCAGGGGCCGTAATTATAGGATTCCGCCATAAAACAAAATCATCATTAGCCCATTTCCTCCCACAAGGAACTCCAATTCCTCTAATCCCAATACTTATTATTATCGAAACAATCAGCTTATTCATTCAACCTATGGCTTTAGCTATCCGACTCACTGCTAATATCACAGCAGGTCATCTACTAATGCATCTGATTGGAGGAGCCACCCTAGCACTAATAT---CAATCAGCACTACCACAGCATTCATCACATTCATTATTCTATTATTACTTACCATATTAGAATTCGCAGTAGCTTTAATTCAAGCATATGTATTTACACTATTAGTCAGCCTATACTTACACGACAATA +>Proechimys_longicaudatus_NC_020657 +------------AATGAACGAAAACCTATTTGCCTCTTTCATAACACCTAA---TTTAATAGGCATTCCTGTCGCAGTATTCATTATTATATTTCCAGCTCTCTTATTCCCTAATCCTAA---TCGACTAATTAATAATCGAACCGTTACAATTCAACAATGATTAATTAAACTAATCCTACAACAAATAATATCGATTCATAGCATTAAAGGACGAACCTGATCACTTATATTAATTACACTAATTCTATTTATCGGGACAACTAATTTACTAGGACTCCTTCCCCATTCTTTTACCCCTACAACTCAACTATCTATGAATTTAGGAATAGCAATCCCCCTTTGAGCAGGAGCTGTGTTACTAGGTTTTCGTCACAAAACACAAACATCTTTAGCCCACTTTCTTCCCCAAGGCACACCATTAGTCCTTATCCCAATACTAGTAGTCATTGAAACAATTAGCCTTTTTATTCAACCTATAGCTCTGGCTGTCCGTCTAACTGCTAATATTACTGCTGGTCATTTGTTAATACACCTAATCGGAGGGGCTGCCTCAGTTCTATTCTC---TATTAACACCCCCGCTGCACTAACTACATTCATTATTCTATTACTACTAACAATGCTAGAATTCGCTGTAGCCCTAATCCAAGCATACGTATTCACACTGCTAGTTAGTCTTTACCTACATGACAATAC +>Ctenomys_sociabilis_voucher_EAL545_NC_020658 +------------ATGAACGAAAATCTATTCTCCTCTTTTATTACACCAACT---TTAATAGGTATACCTATTATTGTTTTAATCATTATATTCCCTATTATCCTATTTCCCAGTCCCAAA---CGATTAATCAACAACCGAGTAACTACCCTTCAACAATGATTGGTAAAAATAATTCTAAAACAAATAATATTAATACATAGCGCCAAAGGACGAACTTGATCCCTTATACTAATTTCTCTTATTCTATTTATTGGCACAACTAATCTACTAGGGTTATTACCACATTCATTTACCCCCACTACCCACCTATCAATAAATTTAGGTATAGCTATCCCTTTATGAGCTGGAACTGTTATCTTAGGGTTCCGCTATAAAACAAAAATATCCTTAGCCCATTTCCTTCCACAAGGAACCCCTATCCTATTAATTCCAATACTCATCATTATTGAAACAATTAGTTTATTTATCCAACCTCTAGCATTAGCAGTCCGTTTAACTGCTAACATTACTGCAGGACACTTACTAATACATCTTATTGGAGGAGCAACATCAGTTCTATTCTCT---ATTAGTCCACCTACTGCTATAATTACATTTATTATTCTTTTACTACTAACAATTCTTGAATTCGCTGTAGCACTAATTCAAGCATATGTATTCACTTTATTAGTTAGCCTTTATTTACATGACAACACT +>Hippopotamus_amphibius_NC_000889 +------------TAATGAACGAAAATCTATTCGCCTCTTTCATTACCCCTA---CAATCCTAGGCCTACCCCTAGTCACCCTAATCATTATATTCCCAAGCATACTATTCCCAGCACCCA---CCCTGCTAATTACTAATCGCTTAGTCTCCATTCAACAATGACTAATCCAGCTCGTATCAAAACAAATAATGAACATCCACAACCACAAGGGACAAACTTGAACACTAATATTAATATCCCTTATCCTATTCATCGGCTCAACAAACCTCCTGGGACTCCTGCCACACTCATTCACACCCACCACACAACTCTCAATAAACTTAGGCATAGCCATCCCCCTGTGAGCAGGCACTGTAATCATAGGCTTCCGTAACAAAACAAAAATCTCCCTGGCCCACTTTTTACCCCAAGGAACACCCACACCCCTAATCCCCATGCTAGTAATCATTGAGACAATCAGCCTATTTATCCAACCGATAGCACTAGCCGTACGACTAACGGCAAACATCACGGCAGGACACCTACTAATGCACCTAATCGGAGGAGCAACCCTCGCATTAATAA---ACATCAGCATAACCACCGCCCTTATCACGTTCATCATCCTAGTCTTACTAACAGCTCTAGAGTTTGCCGTTGCCATAATCCAAGCGTACGTCTTCACCCTACTAGTAAGTCTATACTTACACGATAACA +>Macropus_robustus_NC_001794 +------------AATGAACGAAAATCTATTTGCCACATTCATCACCCCTAC---TATCCTAGGTATTACAACTCTACCAATTATTATACTTTTCCCGTGTTTATTACTTACCTCCCCAAA---GCGCTGATTACCAAACCGTATTCAAATTCTCCAAGTTTGATTAATTCGACTCATTACAAAACAAATACTGACAATTCACAACAAACAAGGCCGATCCTGAGCCCTCATACTAATGTCCCTCATCCTATTTATCGCTTCCACAAATCTCCTAGGACTATTACCCTACTCTTTTACCCCCACAACACAACTCTCCATAAACATCGGTATAGCTATTCCACTATGACTAGCTACTGTCCTAATAGGCTTTCGAAATAAACCCAAAATTTCATTAGCCCATTTTCTACCCCAAGGAACACCTACTCCACTAGTCCCTATACTAATCATTATTGAAACAATCAGCCTATTCATCCAGCCTGTAGCACTAGCAGTGCGATTAACTGCTAACATTACCGCCGGCCACCTACTCATTCACTTAATTGGCTCAGCAACATTAGCACTATGCTC---AATTAGCGTAACAGTATCAACCATCACATTCATTATCCTCTTCCTCCTAACAATCCTAGAACTAGCCGTAGCTATAATTCAAGCCTATGTTTTCACCCTACTTGTAAGCCTATACCTACATGACAACTC +>Oryctolagus_cuniculus_NC_001913 +------------ATGAACGAAAATTTATTCTCCTCTTTCGCTACCCCAACA---CTAATAGGGCTCCCTATTGTAGCCTTAATTATCATATTCCCAACTTTACTATTTCCCTCCCCTAGC---CGACTAATTAACAACCGACTAGTCTCAACCCAACAATGATTAGCCCAACTTATCTTAAAGCAAATAATATTAATACATTCCCCCAAAGGACGAACCTGATCTCTAATACTAATTTCCCTAATCATATTTATTGGCTCAACCAACCTCCTAGGCCTCCTGCCTCACTCATTCACACCAACAACTCAATTATCAATAAATTTAGGGATAGCAATCCCCCTATGAGCAGGAGCCGTAATCACCGGGTTTCGATACAAAACTAAGGCGTCACTAGCCCATTTCCTCCCACAAGGAACCCCTATTCCTCTTATTCCTATGCTAATTGTTATTGAAACTATTAGTCTCTTCATTCAACCTATAGCCCTAGCCGTACGGCTTACAGCCAATATCACAGCAGGCCACCTTCTCATACATCTTATTGGAGGCGCTGCACTAGCTTTAGTCTCA---ATTAGTCCAACAACAGCCCTAATTACCTTTATTATCCTTATTCTACTAACAATTCTAGAATTCGCCGTAGCCTTGATCCAAGCTTACGTCTTTACTCTCCTTGTAAGCCTATACCTACATGACAATACC +>Octodon_degus_voucher_109241_NC_020661 +------------TATGAACGAAAATCTATTCTCCTCTTTTATCACACCAAC---AATACTAGGCATGCCTATTGCAATTATCATTATCATATTCCCCGCTATACTATACCCCAACCCAAA---GCGATTAATTAATAACCGAGTAGTTGCCCTTCAGCAATGATTAATTAAACTAATTCTAAAACAAATAATATTAATTCACTCTACCAAAGGACGAACTTGATCTTTAATATTAATCTCACTAATCTTATTTATTGGGACAACCAATTTATTAGGGCTATTACCACACTCCTTCACCCCTACTACTCAACTATCTATAAACTTAGGTATAGCAATCCCTCTTTGAGCAGGGGCTGTAATCCTGGGCTTCCGTCATAAAACAAAAATATCTTTAGCCCACTTCCTTCCCCAAGGCACACCTATTCTCCTTATCCCTATACTAATTGTAATCGAAACAATTAGCCTATTTATTCAACCAATAGCCTTAGCAGTCCGTCTGACTGCTAATATTACTGCTGGACATTTATTAATACATCTAATTGGAGGAGCAACCTCCGCACTACTTAC---AATTAGCCCTCCAGCAGCTTTAATAACATTCATTATTCTTCTCCTCTTAACCATTCTTGAATTCGCCGTTGCACTAATTCAAGCCTATGTATTTACACTACTAGTTAGCCTTTACCTACATGATAATAC +>Tympanoctomys_barrerae_voucher_AK13811_NC_020792 +------------ATGAACGAAAATTTATTCGCCTCTTTTATCACACCAACA---ATACTAGGGTTTCCCATTGTAATTCTCATTATTATATTTCCTGCAATACTATTCCCTAACCCTAAG---CGACTAATTAACAACCGAATAATCGCTCTCCAACAATGATTAATCAAACTAATTCTAAAACAAATAATATCAATACATACCCCTAAGGGACGAACTTGATCCCTAATATTAATTTCACTGATCCTATTTATTGGGACAACCAATCTATTAGGACTACTACCACACTCTTTCACTCCAACAACCCAACTATCCATAAACCTAGGCATAGCAATCCCTCTTTGAGCAGGGGCTGTGATTTTAGGATTTCGACATAAAACAAAAATATCCTTAGCCCATTTCCTCCCCCAAGGCACACCCATTCTCCTAATCCCAATACTAATCGTAATTGAAACAATTAGCTTATTCATTCAGCCCATAGCTCTAGCAGTCCGTTTAACTGCCAACATTACCGCTGGTCATTTACTAATACACCTTATTGGAGGAGCAACTTCCGTACTACTCATA---ATTAGCCCCCCAGCAGCTCTAATAACATTCATTATCTTACTTCTATTAACTATCCTTGAATTTGCTGTAGCATTAATTCAAGCTTACGTATTTACTTTACTAGTTAGCCTTTACCTACACGATAATACT +>Homo_sapiens_NC_012920 +------------TAATGAACGAAAATCTGTTCGCTTCATTCATTGCCCCCA---CAATCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATTGATCCCCACCTCCA---AATATCTCATCAACAACCGACTAATCACCACCCAACAATGACTAATCAAACTAACCTCAAAACAAATGATAACCATACACAACACTAAAGGACGAACCTGATCTCTTATACTAGTATCCTTAATCATTTTTATTGCCACAACTAACCTCCTCGGACTCCTGCCTCACTCATTTACACCAACCACCCAACTATCTATAAACCTAGCCATGGCCATCCCCTTATGAGCGGGCACAGTGATTATAGGCTTTCGCTCTAAGATTAAAAATGCCCTAGCCCACTTCTTACCACAAGGCACACCTACACCCCTTATCCCCATACTAGTTATTATCGAAACCATCAGCCTACTCATTCAACCAATAGCCCTGGCCGTACGCCTAACCGCTAACATTACTGCAGGCCACCTACTCATGCACCTAATTGGAAGCGCCACCCTAGCAATATCAA---CCATTAACCTTCCCTCTACACTTATCATCTTCACAATTCTAATTCTACTGACTATCCTAGAAATCGCTGTCGCCTTAATCCAAGCCTACGTTTTCACACTTCTAGTAAGCCTCTACCTGCACGACAACA +>Homo_heidelbergensis_NC_023100 +------------AATGAACGAAAATCTGTTCACTTCATTCATTGCCCCCAC---AATCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATTGATCCCCACCTCCAA---ATATCTCATCAACAACCGACTAATTACCACCCAACAATGACTAATCCAACTAACCTCAAAACAAATGATAGCCATACACAACACTAANGGACGAANNNNNNNNNNNNNNNNNNNNNNNNTAATCATTTTTATTGCCACAACTAACCTCCTCGGACTCCTGCCTCACTCATTTACACCAACCACCCAACTATCTATAAACCTAGCCATGGCCATCCCCTTATGAGCNGGCNCNGTGATTATAGGCTTTCGCTCTAAGATTAAAAATGCCCTAGCCCACTTCTTACCACAAGGCACACCTACACCCCTTATCCCNATACTAGTTATTATCGAAACCATCAGCCTACTCATTCAACCAATAGCCCTAGCCGTACGCCTAACCGCTAACATTACTGCAGGCCACCTACTCATGCACCTAATTGGAAGCGCCACACTAGCAATATCAAC---TATTAACNTTCCNNNNNNNNTTATCATCTTCACAATTCTAATTCTACTGACTATCCTAGAAATCGCTGTCGCCTTAATCCAAGCCTACGTTTTTACACTTCTAGTAAGCCTCTACCTGCACGACAACAC +>Myodes_glareolus_NC_024538 +------------ATGAACGAAAATCTATTCGCCTCTTTCGTTACCCCAACA---ATAATAGGCCTTCCTATTGTTATCCTTATCATTATACTCCCACCAATACTTTTAACTTCATCTAAA---CGACTTATCTCCAACCGATTCCACTCATTCCAACAATGGTTAATTAAACTTATCATTAAACAAATAATACTAATTCACTCTCCTAAAGGACGGACATGATCCCTCATACTAGTATCTCTAATTATATTTATTGGCTCAACAAATTTACTAGGCCTCCTACCCCATACATTTACCCCTACAACACAACTGTCAACTAACCTATGTATAGCTATCCCTCTATGAGCCGGAGCCGTAATCTTAGGCTTCCGCCATAAACTAAAAGCCTCACTAGCCCATTTCTTACCCCAAGGCACCCCAATCTCCCTTATCCCCATACTTATTATCATCGAAACCATTAGCTTATTCATCCAACCCATGGCCTTAGCAGTACGGCTAACAGCCAACATTACTGCAGGACACCTGTTAATTCACCTCATTGGAGGAGCTACACTAGTACTAACAAGC---ATTAGCCCCCCAACAGCCACAATTACATTTATTATTCTAGCCCTACTGACTATCCTAGAATTCGCAGTAGCCCTAATTCAAGCCTACGTATTCACCCTTCTAGTCAGCCTATATTTACATGATAACACC +>Crocodylus_acutus_NC_015647 +TAATGACCCTGGCCACAAATCTAAATCTATTTGACCAATTCTTAGTGCCTA---AACTATTTGGCATATCACTACTAATCCCAGCCATATTGCTAACAACACTGCTAATTTATAACCCACAAGACCGCTGACTGTCGAACCCTTTAACAACCCTACAAGCTTGACTAATTGCAAAAACCACTAAACAAATCATAACCCCAGTAAACAAACCAGGACATAAATGATCATTAATACTGATCTCATTACTAACAATGCTTATTCTCAACAACCTCTTAGGCCTTCTCCCGTATACATTTACACCAACAACTCAACTGTCTATAAACATAGCCCTGGCCCTACCACTATGACTGGCAACAGTACTAATTGGCCTACGAAACAAACCAACTTCTTCACTAGCCCACCTCCTGCCAGAAGGGACCCCTACACCCCTTATCCCAATCTTAATCTTAATCGAGACAATCAGCCTGCTCATCCGACCAATCGCACTCGCCGTGCGACTTACAGCCAACCTCACCGCAGGACATCTCTTGATACACCTAATTTCTACTGCGGTACTCAACCTAGTGA---CAACTTCCACACTACTTGCCGGACTAACCCTGTCCATCCTAGCCTTGTTAATACTCCTAGAAATTGCAGTAGCAATGATCCAGGCATATGTATTTACCCTACTACTCTCACTATACCTGCAAGAAAACG +>Anolis_carolinensis_NC_010972 +------------AATGATACTAAGCTTTTTTGATCAATTTTCTATTCCAAC---CGTCTTGGGCATTCCACTAATTTTTGTTGCTACTATTTTTCCAGCCCTACTTATTGTAATAAATAATAGCCGACTAGTATTAAACCGATTGTCAACCCTACTTGAATGATCAATAAAACTATTTTCTAAACAACTTATGCTTCCTATTAATCTGCCGGGCCATAAATGAACTGCCCTACTTTTAACCCTAATAATAACCCTGTCCTCACTAAATATGCTAGGACTTCTACCCTACACATTTACACCAACAACACAACTATCATTTAATATAGCACTTGCAGTCCCAATGTGGCTAGCCACAGTAATAATTGGCCTGCGCAATCAACCAACAATTTCACTTGGACACCTTCTACCTGAAGGCACACCCCTTATACTTATCCCAATCCTAATTATTATTGAAACAATTAGCCTATTTATTCGACCTCTGGCCTTAGGAGTACGACTAACAGCTAATATTACAGCAGGCCACCTTCTTATTCAACTAATTTCAACTGCAACCTTTGTGCTACTTCC---AATAATAACAATAACAGCAACCATTACATTTATTGTTTTACTTCTTCTTACAGGACTTGAAATTGCAGTTGCCCTCATTCAAGCATACGTATTTGTTCTTCTTCTAAGTTTATACCTACAAGAAAATGT +>Caretta_caretta_NC_016923 +------------ATGAACCTAACATTCTTCGACCAATTCATAAGCCCACAA---ATCCTAGGAATCCCATTAACTACCCTAGCCCTACTAATACCATCAACCCTCTTCCCCACCCAAAACACCCGATGATTAACTAACCGTCTTTCAACACTCCAATCATGAACAATCAACTCATTCACAAAACAACTAATACTTCCAATTAATAAAACAGGCCACCAATGATCCATTATCCTAACATCATTAATAACCATACTATTAATAATCAATTTACTAGGCCTTCTACCATACACCTTCACCCCTACTACACAACTTTCCTTAAACATAGGACTAGCCATCCCAATATGACTAGCCACAGTACTCACAGGACTTCGAAATCAACCAACAACATCACTAGGACACCTATTACCAGAAGGCACCCCAATCCTATTAACCCCTATTCTCATTATCATTGAAACAATCAGCTTATTCATCCGACCATTAGCTTTAGGCGTACGACTCACAGCCAACCTAACAGCCGGACATCTACTAATTCAACTTACCTCAACCGCAGTACTAACCCTACTTCCA---ATAATACCTACTCTATCATTACTAACTATAGTTATTCTTTTATTACTAACAATTCTAGAATTAGCCGTAGCCATAATTCAAGCTTACGTATTTGTTCTTCTATTAAGCTTATATTTACAAGAAAACACT +>Gallus_gallus_NC_001323 +------------ATGAACCTAAGCTTCTTCGACCAATTCTCAAGCCCCTGC---CTACTAGGAATCCCTCTAATCCTCCCATCACTCCTTCTTCCAGCCCTCCTACTTCCATCACCAGGAAACCGATGGATCAACAACCGCCTCTCCACCATCCAACTCTGATTCACCCACCTAATCACAAAACAACTAATAACCCCCCTAAACAAGGCAGGTCACAAATGAGCCCTCCTACTCACCTCACTTATCCTAATACTCCTCTCCATTAACCTCCTAGGCCTCCTCCCCTACACCTTCACCCCAACTACCCAACTATCAATAAACATGGCCTTAGCCCTGCCACTATGACTAGCCACCTTACTAACAGGCCTGCGAAACCAACCCTCCGCCTCCTTAGGACACCTACTCCCTGAAGGCACCCCCACCCCACTGATTCCAGCCCTAATCATAATCGAAACAACCAGCCTACTTATTCGGCCATTAGCCCTAGGAGTACGCCTAACAGCAAACCTCACAGCTGGTCACCTACTTATCCAACTTATCTCTACAGCCACAATCGCCCTACTACCA---ATAATGCCATCAATCTCCGCCCTAACGGCACTCATCCTATTCCTACTAACCATCCTAGAAGTGGCAGTAGCAATAATCCAAGCCTACGTCTTCGTCCTCCTCCTAAGCCTCTACTTACAAGAAAATATT +>Passer_domesticus_NC_025611 +------------TAATGAACCTAAGCTTCTTCGACCAATTCTCAAGCCCGT---CCTTACTAGGAATCCCACTAATCCTCATCTCAATAACATTCCCAGCCTTACTCCTCCCCTCCCTAGACAACCGATGGGTCACTAACCGACTCTCCACCCTCCAACTCTGACTAGTTAACCTAATCACAAAACAACTGATAATACCCCTGGACAAAAAAGGCCACAAATGAGCCATGATCCTCACATCTCTCATAATCTTCCTCCTATTGATTAATCTGCTCGGACTGCTACCATACACATTCACCCCAACCACTCAACTATCCATAAACCTAGCCCTAGCATTCCCCCTATGACTCGCCACCCTCCTAACCGGCCTACGTAACCAGCCATCCGCCTCCCTAGGCCACCTCCTACCAGAAGGCACTCCGACCCCACTAATCCCGGCCCTAATCCTAATCGAAACAACAAGCCTATTAATCCGACCACTAGCCCTAGGAGTACGACTCACAGCCAACCTTACAGCAGGACATCTACTCATCCAACTAATCTCCACAGCCACAACAGCCTTATTCT---CAACAATACCAGCAGTCTCTTTACTAACATTAATAGTCCTCTTCCTATTAACCATCCTAGAAGTAGCAGTAGCAATAATCCAGGCCTATGTCTTCGTCCTACTACTAAGCCTCTACCTACAAGAAAACA diff --git a/src/TEST/all_possible.trees b/src/TEST/all_possible.trees new file mode 100644 index 0000000..2f4d386 --- /dev/null +++ b/src/TEST/all_possible.trees @@ -0,0 +1,15 @@ +((A,B),E,(C,D)); +((A,B),D,(C,E)); +((A,B),C,(D,E)); +((A,C),E,(B,D)); +((A,C),B,(D,E)); +((A,C),D,(B,E)); +((A,D),E,(B,C)); +((A,D),B,(C,E)); +((A,D),C,(B,E)); +((A,E),B,(C,D)); +((A,E),C,(B,D)); +((A,E),D,(B,C)); +((B,C),A,(D,E)); +((B,D),A,(C,E)); +((B,E),A,(C,D)); diff --git a/src/TEST/bad_alignment.fa b/src/TEST/bad_alignment.fa new file mode 100644 index 0000000..ae287f8 --- /dev/null +++ b/src/TEST/bad_alignment.fa @@ -0,0 +1,8 @@ +>Sequence5 +MMMMM +>Sequence1 +M-K-K +>Sequence2 +M---- +>Sequence3 +MMMM diff --git a/src/TEST/binary_test.tre b/src/TEST/binary_test.tre new file mode 100644 index 0000000..a35f994 --- /dev/null +++ b/src/TEST/binary_test.tre @@ -0,0 +1,2 @@ +((TaxonX:0.13,(TaxonC:0.25,(TaxonA1:0.07,TaxonA2:0.08,TaxonA3:0.07)1.0:0.235,TaxonB:0.155)1.0:0.5,TaxonW:0.36)0.99:0.39,(TaxonD:0.23,TaxonE:0.16)0.94:0.3); +((TaxonX:0.13,TaxonW:0.36)0.99:0.39,(TaxonD:0.23,TaxonE:0.16)0.94:0.3); diff --git a/src/TEST/clsq.test b/src/TEST/clsq.test new file mode 100644 index 0000000..88dbc8d --- /dev/null +++ b/src/TEST/clsq.test @@ -0,0 +1,42 @@ +>Seq23 +NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAA +>Seq1 +GNTACGAGA----ATATATACGAGANNNNATAT +>Seq2 +GATACGAGANNNNATATATACGAGANNNNATAT +>Seq3 +GATACCCATATATATATATACC-ATATATATAT +>Seq4 +GATACGAGA----ATATATACGAGA----ATAT +>Seq5 +GATAC-AGANNNNATATATACGAGANNNNATAT +>Seq6 +GATACCCATATATATATATACCCATATATATAT +>Seq7 +GATACGAGA----ATATATACGAGA----ATAT +>Seq8 +GATACGAGANNNNATATATACGAGANNNNATAT +>Seq9 +GATACCCATATATATATATACCCATATATATAT +>Seq10 +----------AAA-------------------- +>Seq11 +GNTACGAGA----ATATATACGAGANNNNATAT +>Seq21 +GATACGAGANNNNATATATACGAGANNNNATAT +>Seq31 +GATACCCATATATATATATACC-ATATATATAT +>Seq41 +GATACGAGA----ATATATACGAGA----ATAT +>Seq51 +GATAC-AGANNNNATATATACGAGANNNNATAT +>Seq61 +GATACCCATATATATATATACCCATATATATAT +>Seq71 +GATACGAGA----ATATATACGAGA----ATAT +>Seq81 +GATACGAGANNNNATATATACGAGANNNNATAT +>Seq91 +GATACCCATATATATATATACCCATATATATAT +>Seq101 +----------AAA-------------------- diff --git a/src/TEST/clsq_phylip.test b/src/TEST/clsq_phylip.test new file mode 100644 index 0000000..4e61355 --- /dev/null +++ b/src/TEST/clsq_phylip.test @@ -0,0 +1,23 @@ +20 33 + +Seq23 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAA +Seq1 GNTACGAGA----ATATATACGAGANNNNATAT +Seq2 GATACGAGANNNNATATATACGAGANNNNATAT +Seq3 GATACCCATATATATATATACC-ATATATATAT +Seq4 GATACGAGA----ATATATACGAGA----ATAT +Seq5 GATAC-AGANNNNATATATACGAGANNNNATAT +Seq6 GATACCCATATATATATATACCCATATATATAT +Seq7 GATACGAGA----ATATATACGAGA----ATAT +Seq8 GATACGAGANNNNATATATACGAGANNNNATAT +Seq9 GATACCCATATATATATATACCCATATATATAT +Seq10 ----------AAA-------------------- +Seq11 GNTACGAGA----ATATATACGAGANNNNATAT +Seq21 GATACGAGANNNNATATATACGAGANNNNATAT +Seq31 GATACCCATATATATATATACC-ATATATATAT +Seq41 GATACGAGA----ATATATACGAGA----ATAT +Seq51 GATAC-AGANNNNATATATACGAGANNNNATAT +Seq61 GATACCCATATATATATATACCCATATATATAT +Seq71 GATACGAGA----ATATATACGAGA----ATAT +Seq81 GATACGAGANNNNATATATACGAGANNNNATAT +Seq91 GATACCCATATATATATATACCCATATATATAT +Seq101 ----------AAA-------------------- diff --git a/src/TEST/collapse.tre b/src/TEST/collapse.tre new file mode 100644 index 0000000..1574d4a --- /dev/null +++ b/src/TEST/collapse.tre @@ -0,0 +1 @@ +(((TaxonA:0.1,TaxonB:0.03)0.43:0.125,TaxonC:0.25)1.0:0.4,(TaxonD:0.23,TaxonE:0.16)0.94:0.3); diff --git a/src/TEST/collapse/integer_support.tre b/src/TEST/collapse/integer_support.tre new file mode 100644 index 0000000..e2d7d6f --- /dev/null +++ b/src/TEST/collapse/integer_support.tre @@ -0,0 +1 @@ +(((TaxonA:0.1,TaxonB:0.03)43:0.125,TaxonC:0.25)100:0.4,(TaxonD:0.23,TaxonE:0.16)94:0.3); diff --git a/src/TEST/collapse/prob_support.tre b/src/TEST/collapse/prob_support.tre new file mode 100644 index 0000000..1574d4a --- /dev/null +++ b/src/TEST/collapse/prob_support.tre @@ -0,0 +1 @@ +(((TaxonA:0.1,TaxonB:0.03)0.43:0.125,TaxonC:0.25)1.0:0.4,(TaxonD:0.23,TaxonE:0.16)0.94:0.3); diff --git a/src/TEST/collapse/real_support.tre b/src/TEST/collapse/real_support.tre new file mode 100644 index 0000000..6cc5c27 --- /dev/null +++ b/src/TEST/collapse/real_support.tre @@ -0,0 +1 @@ +(((TaxonA:0.1,TaxonB:0.03)43.3:0.125,TaxonC:0.25)99.9:0.4,(TaxonD:0.23,TaxonE:0.16)94.7:0.3); diff --git a/src/TEST/contrates_file.txt b/src/TEST/contrates_file.txt new file mode 100644 index 0000000..7af6274 --- /dev/null +++ b/src/TEST/contrates_file.txt @@ -0,0 +1,20 @@ +>s10 +100 10 20 +>s9 +100 11 20 +>s8 +100 12 20 +>s7 +100 13 20 +>s6 +90 14 20 +>s5 +80 15 20 +>s4 +110 16 20 +>s3 +120 17 20 +>s2 +100 18 20 +>s1 +100 19 20 diff --git a/src/TEST/contrates_tree.tre b/src/TEST/contrates_tree.tre new file mode 100644 index 0000000..a5c98e4 --- /dev/null +++ b/src/TEST/contrates_tree.tre @@ -0,0 +1 @@ +((((s1:0.3603553431,s2:0.3603553431):0.8968782862,s3:1.257233629):0.4207546592,(((s4:0.1190332191,s5:0.1190332191):0.02544171746,s6:0.1444749366):0.7647640019,s7:0.9092389385):0.76874935):0.06349158892,((s8:0.3106889265,s9:0.3106889265):0.1031508249,s10:0.4138397514):1.327640126); diff --git a/src/TEST/different_sampling.trees b/src/TEST/different_sampling.trees new file mode 100644 index 0000000..89a1262 --- /dev/null +++ b/src/TEST/different_sampling.trees @@ -0,0 +1,3 @@ +(((((Dimu:34.875000,MJM1652:40.125000):14.750000,DrobinSFB:60.250000):17.500000,(Beta123:45.500000,Spol:45.500000):450.750000):10.750000,DrolusSFB:64.250000):30.875000,NepSFB:30.875000); +(((((Dimu:34.875000,MJM1652:40.125000):14.750000,DrobinSFB:60.250000):17.500000,(Beta:45.500000,Spol:45.500000):450.750000):10.750000,DrolusSFB:64.250000):30.875000,NepSFB:30.875000); +(((((Dimu:34.875000,MJM1652:40.125000):14.750000,DrobinSFB:60.250000):17.500000,Spol:45.500000):10.750000,DrolusSFB:64.250000):30.875000,NepSFB:30.875000); diff --git a/src/TEST/drosophila.aln b/src/TEST/drosophila.aln new file mode 100644 index 0000000..d80f3c6 --- /dev/null +++ b/src/TEST/drosophila.aln @@ -0,0 +1,38 @@ +>Drosophila_setosifrons +TTAATAATATTCTTATATAAAATATAATTATTTTTATATTTGGTCCTTTCGTACTAAAATATAACAATTTTTTAAAGATAGAAACCAACCTGGCTTACACCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACAGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTACAAATGGATCAATTATTCATAAATTAATGGTTTTTTAAATTAAAAGTTTATTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAACTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAACTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTTATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTAAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCATGTCCATTGCGGTAAGTAAATATATAAATATATAAATACTTTATCAGGTGGCAGCCTATTTAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAATGTCGAACCACGCGTTGCCGAGCTTCTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGCCTTCAARATAGAGCTTCTCCCTTAATAGAACAACTAATTTTTTTTCATGATCACGCTTTATTAATTTTAGTAATAATCACTGTATTAGTTGGCTACTTAATATTTATATTATTTTTCAATAAATATATTAACCGATTTCTTCTTCATGGACAATTAATTGAAATAATTTGAACAATTCTACCTGCAATTATCTTATTATTTATTGCCCTTCCTTCTTTGCGTCTTCTTTATCTTCTTGATGAAATTAATGAACCTTCAGTAACTTTAAAAAGAATTGGACATCAATGATATTGAAGTTATGAATATTCAGATTTTAATAACATTGAATTTGACTCATACATAATCCCCACAAATGAATTAACAAATGATGGATTCCGTCTTTTAGACGTTGATAATCGAATTATTTTACCCATAAACTCTCAAATCCGAATTCTAGTAACAGCCGCTGATGTAATTCATTYTTGAACTATTCCCGCTTTAGGGGTAAAAGTTGATGGAANTCCTGGCCGATTAAACCAAANTAATTTTTTTATCAACCGACCAGGTTTATTTTACGGACAATGTTCAGAAATTTGTGGAGSTAACCACAGTTTTATACCTATTGTAATTGAAAGAGTCCCTGTTAACTATTTTATTAAATGAATTTYTAAAAGRGTAAATTYTT--CCCGCCCTGGTTGAGGCTAGCCAAGAATGCTGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGTAAGATCAAGCCCAACGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGAGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCAATCTTGATTAAACATATAMTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCTAATCTGGCCAATGAAGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAAAAAGCCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCACTTCCGTGTTGTCGTTGTGGACGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGACTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTACCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTAAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAATCTTTCACACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCGGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAAGGCCCACCCACGGCAGAGGAAGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGACTAAACATTTCAGTCCTAATTAATTTTCAATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAAAGATTTAATCGA +>Drosophila_adunca +TTAATAATATTCTTATTAAAAATATAATTATTTAAATATTTGGTCCTTTCGTACTAAAATATTTTAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATAATTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTGTATAATTAAAATAAACAAAATATAAAGATTNATAGGGTCTTCTCGTCTAGTAAATGTATTTTAGCTTGTGGACTACAAAATAAAATTGTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTCACAGGTACTGTGAACACCACTACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGTCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTACCCGTTTACTCTGCATCAAAGGCGGCTGCCCTAAGCTTCACCAGTTCCCTCTCGGTAAGTAAATATATAAATRTAT--ATACTTCAGAAGGTGACAATCTATTGATTCTTAACAGAGATTGGCCCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCAAAACCACTCTGGTGCACAAATTTAACTCTTGGCTGAATGTTGAGCCACGGGTTGCGGAGCTACTCCTTGAGTTTCCCACACAGACAACGGAGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGTCTTCAAGATAGAGCTTCACCTTTAATAGAACAACTAATTTTTTTTCACGATCATGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTAGGGTATTTAATATTTATATTATTTTTTAATACATATATTAACCGATTTTTACTCCACGGACAATTAATTGAAATAATTTGAACTATTTTACCTGCAATTATTTTATTATTTATTGCTCTTCCTTCTTTACGTCTTTTATACCTTTTAGATGAAATTAACGAACCTTCAGTAACTTTAAAAAGAATTGGACACCAATGATATTGAAGTTATGAATATTCAGATTTTAATAATGGTGAATTTGATTCTTATATAATTCCTACTAATGAACTTGCCAATGATGGATTTCGATTATTAGACGTTGATAACCGAATTGTCTTACCAATAAATTCACAAATTCGAATTTTAGTTACAGCCGCAGATGTAATTCATTCATGAACAATTCCTGCTTTAGGAGTAAAAGTAGATGGAACTCCTGGTCGATTAAATCAAACTAATTTTTTTATCAACCGGCCAGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGTGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTACCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTT-------------TGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTTATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAACGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCACCTGAAGGTAAGCCTATACGCAAACATGACTCTTGGCACTCTTGATTAATCCTATACTATCTACAATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCGAATGAGGTGGCTGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTAGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTTGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCGGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGCTTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGTGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ATACATTTTCAATTC----ATTTAAAACCTTTCACACAGGCGGTCGCAATCGTCGTGTCTCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCATGCCCAATTAATTTATTATATTAACCTAATGCC---TTTCTTTCAGATTCCCCCTGTTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCT-------------- +>Drosophila_oahuensis +TTAATGAAATTCTTGCTAAAAATATGATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTGTTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAACTTATTATAACAAAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATGGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACGCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATGTTAACAGAAATTGGCGCATATTACTGGTGTTACGGCATATTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATTCCACACAGACATCATTGCAGTGCGCACATAACTTTGTGAAAGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGCCTTCAAGATAGAGCTTCACCTTTAATAGAACAACTTATTTTTTTCCATGATCACGCTTTATTAATTTTAGTAATAATTACAGTCTTAGTCGGATACTTAATATTTATACTATTTTTTAATAGTTATATTAACCGATTTCTACTCCATGGTCAATTAATTGAAATAATTTGAACAATTTTACCTGCAATTATTTTATTATTTATTGCTCTCCCCTCTTTACGACTTCTCTACCTTTTAGATGAAATTAATGAACCTTCCGTAACTTTAAAAAGAATCGGTCACCAATGATATTGAAGTTATGAATATTCAGATTTTAATAACGTTGAATTTGATTCTTACATAATCCCTACAAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTTGACAACCGAATTATTTTACCTATAAACTCACAAATTCGAATTTTAGTYACAGCCGCGGATGTAATTCATTYTTGAACAATTCCCGCTTTAGGAGTAAAAGTTGACGGAACCCCGGGTYGTTTAAACCAAAMTAATTTTTTTATYAACCGACCAGGSTTATTTTATGGACAATGTTCAGAAATTTGCGGAGCTAACCATAGCTTTATACCTATTGTAATTGAAAGTGTACCTGTAAATTATTTTATTAAATGAATTTTTAGTAGAGTAAATTTTT----------GGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTAGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGAGGCATTGATCTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCGCAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCAAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGCGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATC------------------------- +>Drosophila_picticornis +TTAATAATATTCTTATTTAAAATATAATTATTTTAACATTTGGTCCTTTCGTACTAAAATGTTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCGTTATTAACGGATCAATTATTCATAAATCAATGATTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAACAGAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTACAATAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTCCTCATCAATGGCGCTGGTATCCTGGATGATCATCAGATTGAGCGCACCATTGCGGTGAACTTTGCAGGTACAGTGAACACCACAACAGCGATCTTGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCCGTAACTGGCTTTAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCATGTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAAGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATACTCCATCAATCCGGGCATTACCAAAACTATTCTGGTGCATAAATTCAACTCCTGGCTAAATGTTGAGCCACGCGTTGCCGAGCTTCTCCTTGAGCATCCCACACAGACAACACTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTCAAGATAGAGCTTCACCTTTAATAGAACAATTAATTTTTTTTCATGATCATGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTCGGATACTTAATATTTATATTATTTTTTAATAACTATATTAATCGGTTTCTTCTTCATGGGCAATTAATTGAAATAATTTGAACAATCTTGCCCGCAATTATTTTGTTATTTATCGCTCTCCCTTCCTTACGTCTTCTTTATCTTTTAGATGAAATTAACGAACCTTCAGTAACTCTAAAAAGAATTGGACATCAATGATATTGAAGTTATGAATATTCTGATTTTAACGATATTGAATTTGATTCTTATATAATTCCTACGAATGAATTAACAAATGACGGATTTCGTCTTTTAGATGTTGATAACCGAATTATTTTACCGATAAATTCTCAAATTCGAATTTTAGTGACAGCAGCAGATGTAATCCATTCTTGAACAATCCCCGCTTTAGGGGTAAAAGTAGATGGAACCCCTGGTCGACTAAATCAAACCAATTTTTTTATAAACCGACCTGGTTTATTYTACGGCCAATGTTCAGAAATCTGTGGAGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATCAAATGAATTTYTAACCAAGTAAATTYTT-------------------------------------------TTTTTGTGGTGCCGCATCAGTTTATCCCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAACGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATTTGAAGGTGAGTCTACACGCAAAGGTGACTCTTGGCAATCTTGATTAAACCTTTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCAAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAAAAAGCCAAGGTGCTGCGTGATCTCTTCCAGGCCAATCACTTCCGTGTTGTCGTTGTGGAAGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGTGACAATACCAAAGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCGACGTTCTTTGAGAGCTGCGGCGTCGCTGATCTTATCACGACGTGCTATGGTTCGTGTCCAACACTACATTTGAAATTTAATTATTAATTATATTTTAAAATCTTTTAATTC----ATATGAAATCTTTCACACAGGTGGTCGCAATCGTCGCGTATCTGAGGCTTTTGTCACATCTGGCAAAACCATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAAGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTAATTTATTTATTATAATAATCAAATATTAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCT-------------- +>Drosophila_primaeva +TTAATAATATTCTTACCAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTACTAATGGATCAATTACTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAACAAAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTACAAAAATTTTAAATGAAACAAGTTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATACTCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACTACTGCGATCTACGACTTCTGGGACAAGCGTAAGGGCGGACCAGGTGGTGTTATTGCCAACGTCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTNTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCTCTTCCCTTGCCGTAAGTAAACATATATTTATAT--AGACTTCCTCAGGTGGCAACCTATTGAATCTTAACAGAGATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCAGGCATTACCAAAACCGCTCTGGTGCATAAATGCAACTCTTGGCTGAATGATGAGCCAGGCGTTGACGAGCTTCTACTTGAGCATTCCACACAGACAACGGTCCAGTGCGCTCAGAACTTTGTCAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTCCAAGATAGCGCCTCACCCTTAATAGAACAACTTATTTTTTTCCATGACCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTTGGATATTTAATATTTATATTATTTTTTAATAACTATATTAATCGATTTTTATTGCACGGGCAACTAATTGAAATAATTTGAACAATTTTACCAGCAATTATTTTATTATTTATTGCTCTACCCTCTTTACGCCTTTTATACCTTTTAGATGAAATTAACGAACCCTCAGTTACTTTAAAAAGAATTGGACATCAATGATATTGAAGCTACGAATATTCAGATTTTAATAACGTAGAATTTGATTCGTATATAATCCCTACCAATGAATTAGCAAACGACGGATTTCGACTATTAGATGTTGATAACCGAATCATTTTACCTATAAATTCTCAAATCCGAATTTTAGTAACAGCAGCTGATGTAATTCACTCATGAACAATCCCAGCTTTAGGGGTAAAAGTTGATGGAACCCCTGGACGATTAAACCAAACCAATTTTTTTATTAACCGACCTGGGTTATTTTATGGACAATGCTCAGAAATTTGTGGGGCAAATCATAGCTTCATACCTATTGTAATTGAAAGTGTTCCCGTGAATTATTTTATTAAATGAATTTCTTCGAGAGTAAATTCTT--CCGACCCTGGTTGAGGCTAGCCAAGAATGCTGATATACTCATTTTTGTGGTGCCCCATCAGTTTATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAATGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCCATACGCAAAGGTGACTCTGGGCAATCTTAATTAATCCTATAATATCAACTATCAGATACCATGCGCTGGGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACTACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTTGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGTGGTGCCTTGAAGAACATCGTCGCCTGTGGTGCGGGCTTCGTTGATGGTCTCAAACTGGGCGACAATACCAAGGCGGCGGTCATCCGTCTCGGCCTTATGGAAATGATTCGCTTCGTCGATGTCTTCTATCCAGGCAGTAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTAAATTTCAATTAT--ATTAAA----ACACTTTTTCAATTCATGAATATGAAACCTTTCACACAGGCGGTCGCAATCGTCGTGTCTCTGAGGCCTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGACAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTTAGGCATCATTTATTTATTATATTAATTAAATATCAACTTTCTTTCAGATTCCCCCTGTTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTTAATCG- +>Drosophila_nigribasis +TTAATAATATTCTTATTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACATTAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATTTATGGTTTTAAAAATTAAAAGTTTTTAAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTAACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCCTGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGCTGGCAACCAATTGAATCTTATCAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTCTGGTGCACAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTCCAAGATAGAGCTTCACCCTTAATAGAACAACTTATTTTTTTCCACGATCACGCCTTATTAATTTTAGTAATAATTACTGTTTTAGTTGGATATTTAATATTTATATTATTTTTTAATAGATATATTAACCGATTTCTACTTCATGGTCAATTAATTGAAATAATTTGAACAATCTTACCTGCAATTATTTTATTATTTATTGCTCTTCCCTCTTTACGACTTCTTTACCTTTTAGATGAAATTAATGAGCCTTCAGTAACTTTAAAAAGAATCGGGCACCAATGATATTGAAGCTACGAATATTCAGATTTTAATAATATTGAATTTGATTCATATATAATCCCTACTAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTAACAGCTGCAGATGTAATTCATTCTTGAACAATCCCTGCTTTAGGGGTAAAAGTTGATGGAACTCCTGGTCGTTTAAACCAAACTAATTTTTTTATTAACCGACCTGGTTTATTTTATGGGCAATGTTCAGAAATTTGTGGAGCTAATCATAGTTTTATACCTATTGTAATTGAGAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTT--CCCGCCCGGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTAGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACCATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGCGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATATCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGCCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTTAATCGA +>Drosophila_obscuripes +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCANAAATCAATGGTGGTAAAAATTAAAAGTTTTTTNAATTTTAATATCNCCCCAATAAAATWTTTTAWTTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTGTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGATAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAAGTGGCAACTAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTYAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCATGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTGGGATACTTAATATTTATACTATTTTTTAACAGTTATATTAACCGATTTCTACTACATGGACAACTAATTGAAATAATTTGAACAATCCTACCCGCAATTATTTTATTATTTATTGCTCTCCCTTCTTTACGGCTTCTTTACCTTTTAGATGAAATTAATGAACCTTCGGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAAGTTATGAATATTCAGATTTTAATAATGTTGAATTTGATTCATATATAATCCCTACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCAGATGTAATTCATTCTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACTCCTGGTCGATTAAACCAAACTAATTTTTTTATTAACCGACCGGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGCGCTAACCATAGTTTTATACCTATCGTAATCGAAAGCGTTCCTGTTAAATATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT-TCCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCTCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGTGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGCTTAAACCTGTAMTATATACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGTCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCC--------------- +>Drosophila_silvestris +TTAATAATATTCTTATTTAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAGCGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTACTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATACTCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAATGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAACATATTTATACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACTGTATATTCCATCAATCCGGGCATTACCAAAACTGTTCTAGTGCATAAATTCAACTCCTGGCTGAATGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTGGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTTGGGTATTTAATATTTATATTATTTTTTAATAGTTATATTAACCGATTCCTACTCCACGGACAATTAATTGAAATAATTTGAACGATTTTACCCGCCATTATTTTATTATTTATTGCTCTCCCCTCCCTTCGTCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTAAAAAGAATTGGCCATCAATGATACTGAAGTTACGAATACTCAGATTTTAACAGAATCGAATTTGATTCATATATAATTCCTACAAATGAGTTAGCGAATGATGGATTCCGACTCCTAGATGTTGATAACCGAATTGTTTTGCCTATAAATTCTCAAATCCGAATTTTAGTAACCGCCGCAGATGTAATTCATTYTTGAACAATCCCTGYTYTTGGGGTAAAAGTTGATGGAABTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGGCCAGGCTTATTTTATGGACAATGTTCAGAAATTTGTGGGGCTAACCATAGTTTTATACCTATTGTAATCGAAAGTGTCCCTGTGAACWATTTTATTAAATGAATTTNTAACAGAGTAAATTYTT--CCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTAGGCAAGATCAAGCCCCGCGCGATTGCCATATCACTGATCAAGGGTTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGTTTAAACCCGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAAGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTACGGGCTTTGTCGATGGTCTCAAGTTGGGTGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTHGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTSAGANCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGGAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTAAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAWCTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAAAATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCC--------------- +>Drosophila_heteroneura +TTAATAATATTCTTATTTAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAGCGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTACTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATACTCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTGGTTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAATGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTGGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTTGGATATTTAATATTTATATTATTTTTTAATAGTTATATTAACCGATTCCTACTCCACGGACAATTAATTGAAATAATTTGAACGATTTTACCCGCCATTATTTTATTATTTATTGCTCTCCCCTCCCTTCGTCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTAAAAAGAATTGGCCATCAATGATACTGAAGTTACGAATACTCAGATTTTAACAGAATCGAATTTGATTCATATATAATTCCTACAAATGAGTTAGCGAACGATGGGTTCCGACTCCTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTAACCGCCGCAGATGTAATTCATTYTTGAACAATCCCTGCTCTTGGGGTAAAAGTTGATGGAACTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGGCCGGGCTTATTTTATGGACAATGTTCAGAAATTTGTGGGGCTAACCATAGTTTTATACCTATTGTAATCGAAAGTGTCCCTGTGAACTATTTTATTAAATGAATTTCTAACAGAGTAAATTYTT----------------------CCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCGATTGCCATATCACTGATCAAGGGTTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGTTTAAACCCGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAAGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAGCTGGGAGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACAACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACTTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTCATTTATTTATAATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGGCATACACAAAATTTGCACAAATC------------------------- +>Drosophila_differens +TTAATAATATTCTTATTAAAAATATAATTATCTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTAATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACGAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTACACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTGGGCCTTYAAGATAGCGCCTCGCCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTCGGGTACTTAATGTTTATATTATTTTTTAATAATTATATTAATCGGTTCCTACTTCATGGGCAATTAATTGAAATAATTTGAACAATTTTGCCCGCCATTATTTTATTATTTATTGCTCTTCCTTCCCTTCGTCTTCTTTACCTCCTAGATGAAATTAACGAACCCTCAGTTACTTTAAAAAGAATTGGTCATCAATGATATTGAAGTTACGAATACTCAGATTTTAACAGAATTGAATTTGATTCATACATAATTCCTACAAATGAGTTAGCAAACGATGGATTCCGTCTTTTAGATGTTGATAACCGAATTGTTTTACCCAYAAATTCTCAAATCCGAATTTTAGTAACTGCCGCGGATGTAATCCATTCTTGAACAATCCCCGCTCTTGGAGTAAAAGTTGATGGAACTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGACCGGGCTTATTCTACGGACAATGTTCAGAAATTTGTGGCGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTT--------------------------------CGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCGATTGCCATATCACTGATCAAGGGYTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTACTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAGCTGGGAGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGTGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACTTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAAAATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTTAATCGA +>Drosophila_planitibia +TTAATAATATTCTTATTAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAGCGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATAATAATAAAACTAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTAATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTACACTTCATCAGGTGGCAACCAATTGAATCTCAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGATGCCTACCAGAAATGTCAACATGAGCTAACCTGGGCCTTCAARATAGCGCCTCACCTTTAATARAACAACTTATTTTTTTCCACGATCACGCTTTATTAATTTTAGTTATAATTACTGTTTTAGTCGGRTACTTAATGTTTATATTATTTTTTAAYAATTATATTAAYCGGTTCCTACTCCAYGGRCAATTAATTGAAATAATTTGAACAATTTTGCCCGCCATTATTTTATTATTTATTGCTCTCCCCTCTCTTCGTCTTCTTTACCTCCTAGATGAAATTAACGAACCYTCAGTTACTTTAAAAAGAATTGGYCATCAATGATATTGAAGTTACGAATACTCAGATTTTAACAGAATCGAATTTGATTCATACATAATCCCTACAAATGAGTTAGCGAAYGATGGNTTCCGACTTTTAGANGTTGATAACCGAATTGTTTTACCYATAAATTCTCAAATCCGAATTTTAGTAACTGCCGCNGATGTAATCCATTCTTGAACAATCCCCGCTYTTGGAGTAAAAGTTGATGGAACTCCTGGCCGATTAAACCAAACTAATTTTTTTATCAACCGACCGGGCTTATTTTACGGACAATGTTCAGAAATTTGTGGGGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTYTT-------------------------------TCGATATACTCATTTTTGTKGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCGATTGCCATATCACTGATCAAGGGTTTCGATAAGGCCGGGGGGGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGTTTAAACCCGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATACGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAGCTGGGAGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACTTTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCC--------------- +>Drosophila_hemipeza +TTAATAATATTCTTAATAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGCTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTACAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTCAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAATGGCGGCCCAGGTGGTGTGATTGCCAATATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACAACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAAAACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCGACTCCTTGAGCATCCCACACAGACAACATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAACCTAGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCACGCCCTATTAATTTTAGTTATAATTACCGTTTTAGTCGGATATTTAATATTTATATTATTTTTTAATAACTACATTAATCGATTTTTACTCCACGGACAATTAATTGAAATAATTTGAACAATTTTACCCGCCATTATTTTATTATYTATTGCTCTCCCTTCTTTACGTCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTAAAAAGAATTGGTCATCAATGATATTGAAGTTATGAATACTCAGATTTTAATAGAATTGAATTTGACTCTTATATAATCCCTACAAACGAGCTAACGAACGACGGATTTCGGCTATTAGATGTCGATAACCGAATTGTTTTACCTATAAATTCTCAAATTCGGATTTTAGTGACTGCCGCAGATGTAATCCATTCATGAACAATTCCGGCCCTTGGGGTAAAAGTTGATGGAACCCCTGGTCGATTAAATCAAACTAATTTTTTTATTAACCGACCAGGTTTATTTTACGGACAATGTTCAGAAATCTGCGGAGCTAACCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTTAATTATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT----------------GGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCCAATTTCTGTAAGCAACTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACACGCCATCTGAAGGTAAGCCTATACGCAAAGGTGACTCTTGGCTATCTTGCTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGTGCCAATCTGGCCAATGAGGTGGCCGAGGGCAACTTTTGCGAGACAACAATCGGCTGCACGGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGCATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCAGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACTTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAAGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTAGGCTAAACATTTCAGGCCTAATTTTTTTATAATATTAACCAAATATCAACTTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAA------------ +>Drosophila_ingens +TTAATAATATTCTTATTAAAAATATAATTATTTTAATATTTGGTCCTTTCGTACTAAAATATTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCRGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATTCCACACAGACATCATCGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATCTTAGTTATAATTACAGTTTTAGTGGGGTACTTAATATTTATACTATTTTTTAACTCTTATATTAACCGATTTTTACTACACGGACAATTAATTGAAATAATTTGAACAATCTTACCTGCAATTATTTTGTTATTCATTGCTCTACCTTCTTTACGACTTCTCTACCTTTTAGATGAAATCAATGAACCTTCAGTAACTTTAAAGAGAATTGGCCACCAATGATACTGAAGCTATGAATACTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTTGATAATCGAATCGTTTTACCCATAAATTCACAAATCCGAATTTTAGTGACAGCCGCAGATGTAATTCATTTTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAAMTCCTGGTCGTTTAAACCAAACTAATTTTTTTATTWACCGACCAGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGGGSTAATYATAGCTTTATACCTATTGTAATTGAAAGAGTCCCTGTTAATTATTTTATTAAATGAATTTYTAATAGAGTAAATTYTTTTCCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCTCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACACTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCAGTCATTCGTCTCGGACTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGANAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTNGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCCCAYTTATTTATTATATTAACCAAATATCGCCCTTCTTTCAGATTCCCCCTATTT----------------------------------------------------- +>Drosophila_neopicta +TTAATAATATTCTTATTAAAAATATAATTATTTTCATATTTGGTCCTTTCGTACTAAAATATAATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAACCAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTTATCAGCTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGAGCTTCTCCCCTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATTTTAGTAATAATTACTGTTTTAGTTGGATATTTAATATTTATGCTATTTTTTAATAGTTACATTAACCGATTTCTACTTCACGGACAATTAATTGAAATAATTTGAACGATCTTACCTGCAATTATTTTATTATTTATTGCTCTCCCTTCTTTACGACTTCTATACCTTTTAGATGAAATTAATGAGCCCTCAGTAACTTTAAAAAGAATTGGTCATCAATGATATTGAAGTTATGAGTATTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAGCAAACGATGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTGACCGCCGCAGATGTAATTCATTCTTGAACAATCCCTGCTCTAGGGGTAAAAGTTGATGGAACTCCTGGTCGCTTAAACCAAACTAATTTTTTTATTAACCGACCTGGTTTATTCTACGGACAATGTTCAGAAATTTGTGGAGCTAATCATAGTTTTATACCTATTGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT-TCCCCGCCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTTGATAAGGCCGAGGGTGGCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAGCCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATGTGATACCTTTCAAACAGGCGGTCGYAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATGTCAGGCCTAATTTATTTATTATATTAACCAAATATCAAAATTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGGGCAA---------------------------- +>Drosophila_substenoptera +TTAATAATATTCTTATTAAAAATACAATTATTTTCATATTTGGTCCTTTCGTACTAAAATATAATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATTAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTACAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGCAAGGGCGGCCCAGGTGGTGTTGTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCATTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGCTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGCATATTCCATCAATCCGGGCATTACCAATACTGTTTTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACGCAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTCCAGGATAGAGCTTCACCCCTAATAGAACAACTTATTTTTTTCCACGATCACGCCCTATTAATTTTAGTAATAATTACTGTTTTAGTCGGATATTTAATATTTATATTATTTTTTAACAGGTATATTAACCGATTTCTTCTTCATGGCCAATTAATTGAAATAATTTGAACAATTTTGCCGGCAATTATTTTATTATTTATTGCTCTCCCCTCCCTACGACTTCTTTACCTTTTAGACGAAATTAATGAACCTTCAGTAACTTTAAAAAGAATTGGTCATCAATGATACTGAAGCTACGAATACTCAGATTTTAATAATGTTGAATTTGATTCTTATATAATTCCCACCAATGAATTAACAAATGACGGATTTCGACTTTTAGATGTCGATAACCGAATCGTTTTACCTATAAATTCTCAAATCCGAATTTTAGTGACAGCCGCAGATGTAATTCATTCTTGAACAATCCCCGCTTTAGGGGTAAAAGTTGACGGAACTCCAGGTCGTTTAAACCAAACTAATTTTTTTATCAACCGACCTGGCCTATTTTATGGACAATGTTCAGAAATTTGCGGAGCTAACCATAGTTTTATACCTATCGTAATTGAAAGTGTTCCTGTAAATTATTTTATTAAATGAATTTCTAACAGAGTAAATTCTT--CCCGACCTGGTTGAGGCTAGCCAAGAATGCCGATATACTAATTTTTGTGGTGCCGCATCAGTTRAKACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAKCCCAGCGCCATTGCCATATCACTGATCAAGGGKTTCGATAAGGCCGAGGGTGCCGGCATTGATCTAATTTCGCACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGATATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTAGTCGTTGTGGGGGATGCCGATGCCGTTGAAGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACTTTCTTTCAGGTTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAA------------ +>Drosophila_neoperkinsi +TTAATAAGATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGCTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAATAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCAATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATATTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGCGCCTCACCTTTAATAGAACAACTTATTTTTTTCCATGATCACGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTGGGGTACTTAATATTTATATTATTTTTTAACAATTATATTAACCGATTTCTACTACATGGACAATTAATTGAAATAATTTGAACGATTCTTCCCGCAATTATCTTATTATTTATTGCTCTCCCTTCTTTACGGCTTCTTTACCTTTTAGATGAAATTAATGAACCCTCAGTAACTTTGAAAAGAATTGGTCACCAGTGATATTGAAGTTATGAATACTCAGATTTTAATAACGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAATAAATGACGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCGGATGTAATTCATTCCTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACCCCTGGCCGTTTAAACCAAACTAATTTTTTTATTAACCGGCCAGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGTGCTAACCATAGCTTTATACCTATTGTAATTGAAAGTGTCCCTGTTAATTATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT---------TGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCTCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGCGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACWCTTTGTTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAATGATTT------ +>Drosophila_melanocephala +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCACTATTAATGGATCAATTATTCATAAATCAATGGTTTTTAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATTGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTCAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTAGGATACTTAATATTTATACTATTTTTTAACAGTTATATTAACCGATTTCTACTACATGGACAACTAATTGAAATAATTTGAACAATTCTACCCGCAATTATTTTATTATTTATTGCTCTACCTTCTTTACGGCTTCTTTACCTTTTAGACGAAATTAATGAACCTTCGGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAAGTTATGAATATTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCCACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAACCGAATTATTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCAGATGTAATTCATTYTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACTCCTGGTCGATTAAACCAAACTAATTTTTTTATTAACCGACCAGGCTTATTTTATGGACAATGTTCAGAAATTTGTGGAGCTAATCATAGCTTTATACCTATTGTAATCGAAAGTGTTCCTGTTAAWTATWTTATTAAATGAATTTNTAATAGAGTAAATTCTT-------------------------------------------------TGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTRTTGGGCAAGATCAAGCCCAGTGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGACTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGAACTATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCATGGGCTAAACATTTCAGGCCTAACTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGC---------------------- +>Drosophila_hanaulae +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATYTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGCTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGGTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGTACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCTCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTGATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGARTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATCGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGCCTTCAAGATAGAGCTTCACCTTTAATAGAACAACTTATTTTTTTTCACGATCATGCCCTATTAATCTTAGTTATAATTACAGTTTTAGTGGGATACTTAATATTTATATTATTTTTTAACTCTTATATTAACCGATTTTTACTACACGGACAATTAATTGAAATAATTTGAACAATCTTACCTGCAATTATTTTGTTATTTATTGCTCTCCCTTCTTTACGACTTCTTTACCTTTTAGATGAAATCAATGAACCTTCAGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAAGCTATGAATACTCAGATTTTAATAATGTTGAATTTGATTCATATATAATTCCTACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAATCGAATCGTTTTACCTATAAATTCACAAATCCGAATTTTAGTGACAGCCGCGGATGTAATTCATTCTTGAACAATCCCTGCCCTAGGGGTAAAAGTTGATGGAACTCCTGGTCGTTTAAACCAAACTAATTTTTTTATTAACCGACCAGGTTTATTTTACGGACAATGCTCGGAAATTTGTGGTGCTAACCATAGCTTTATACCTATTGTAATTGAAAGTGTCCCTGTTAAATATTTTATTAAATGAATTTCTAATAGAGTAAATTCTT------CCCTGGTTGAGGCTAGCCAAGAATGCCGATATACTCATTTTTGTGGTGCCGCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGTGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAAYACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGAAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGAAACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCTTGGGCTAAACATTTCAGGCCTAATTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCTATTTACTGCCATACACAAAATTTGCACAAATCAGCTTAAGCCTAA------------ +>Drosophila_cyrtoloma +TTAATAATATTCTTACTAAAAATATAATTATTTTAGTATTTGGTCCTTTCGTACTAAAATACTATAATTTTTTAAAGATAGAAACCAACCTGGCTTACGCCGGTCTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACCCAAAATTATATCTTAATCCAACATCGAGGTCGCAATCTTTTTTATCGATATGAACTCTCCAAAAAAATTACGCTGTTATCCCTAAAGTAACTTAAATTTTTAATCATTATTAATGGATCAATTATTCATAAATCAATGGTTTTAAAAATTAAAAGTTTTTTAAATTTTAATATCACCCCAATAAAATATTTTAATTTATTATAATAAAAATAATCTTTATAATTAAAATAAACAAAATATAAAGATTTATAGGGTCTTCTCGTCTTTTAAATTTATTTTAGCTTTTTGACTAAAAAATAAAATTCTATAAAAAATTTAAATGAAACAAGCTGAAGACAGTTGATCTGCTCATCAATGGCGCTGGTATCCTGGACGATAATCAGATTGAGCGCACCATTGCGGTGAATTTTACAGGCACAGTGAACACCACAACTGCGATCATGGATTTCTGGGACAAGCGTAAGGGCGGCCCAGGTGGTGTTCTTGCCAACATCTGCTCAGTAACTGGCTTCAACTCCATCTATCAGGTGCCCGTTTACTCTGCCTCAAAGGCGGCTGCCCTAAGCTTCACCACTTCCCTTGCGGTAAGTAAATATATAAATATATTTATACTTCATCAGGTGGCAACCAATTGAATCTTAACAGAAATTGGCGCATATTACTGGCGTTACGGTATACTCCATCAATCCGGGCATTACCGATACTGTTCTGGTGCATAAATTCAACTCCTGGCTGAGTGTTGAGCCACGCGTTGCCGAGCTACTCCTTGAGCATCCCACACAGACATCATCGCAGTGCGCACAGAACTTTGTGAAGGCCATTGAGGCCAACCAGAAATGTCAACATGAGCTAATTTAGGTCTTCAAGATAGAGCCTCACCTTTAATAGAACAACTTATTTTTTTCCACGATCATGCCCTATTAATTTTAGTTATAATTACAGTTTTAGTGGGATACTTAATATTTATACTATTTTTTAACAGTTATATTAACCGATTTCTACTACATGGACAACTAATTGAAATAATTTGAACAATCCTGCCCGCAATTATTTTATTATTTATTGCTCTCCCTTCTTTACGGCTTCTTTMCCTTTTAAATGAAATTAATGAACCTTCGGTAACTTTAAAAAGAATTGGCCACCAATGATACTGAATTTATGAATATTCAGATTTTAATAANGTTGAATTTGATYCATATATAATCCCTACAAATGAATTAACAAATGATGGATTTCGACTTTTAGATGTTGATAACCGAATTGTTTTACCTATAAATTCACAAATTCGAATTTTAGTAACAGCCGCAGAWGTAATTCATTTTTGAACAATCCCTGCCTTAGGGGTAAAAGTTGATGGAACTCCTGGTYGATTAAACCAAAMTAATTTTTTTATTAACCGACCVGGTTTATTTTATGGACAATGTTCAGAAATTTGTGGVGCTAACCATAGTTTTATACCTATYGTAATCGAAAGCGTTCCTGKTAAWTATWTTATTAAATGAATTTNTAATAGAGTAAATTCTT--CCCGCCCTGGTTGAGGCTAGCCAAGAATGCCGATATACTHATTTTTGTGGTGCCNCATCAGTTCATACCAAATTTCTGTAAGCAATTGTTGGGCAAGATCAAGCCCAGYGCCATTGCCATATCACTGATCAAGGGCTTCGATAAGGCCGAGGGTGGCGGCATTGATTTAATTTCACACATTATCACCCGCCATCTGAAGGTAAGTCTATACGCAAAGGTGACTCTTTGCTATCTTGTTTAAACCTGTACTATCTACTATCAGATACCATGCGCTGTGCTGATGGGCGCCAATCTGGCCAATGAGGTGGCCGAAGGCAACTTTTGCGAGACAACAATCGGCTGCACAGACAAAAAATATGGCAAGGTGCTGCGCGATCTCTTCCAGGCTAATCATTTCCGTGTGGTCGTTGTGGGGGATGCCGATGCCGTTGAGGTTTGCGGTGCCCTGAAGAACATCGTCGCCTGTGGTGCGGGCTTTGTCGATGGTCTCAAACTGGGCGACAATACCAAGGCAGCGGTCATTCGTCTCGGCCTTATGGAAATGATTCGATTCGTCGATGTCTTCTATCCGGGCAGCAAATTGTCCACGTTCTTTGAGAGCTGCGGCGTTGCCGATCTTATCACGACGTGCTATGGTTCGTGTCGACCAATACATTTGAAATTCAATTAT--ATTAAA----ACACTTTTTCAATTC----ATATGATACCTTTCAAACAGGCGGTCGCAATCGTCGTGTATCTGAGGCTTTTGTCACATCTGGCAAAACTATTGAGGAACTGGAGAAGGAAATGCTCAATGGTCAGAAATTGCAGGGCCCACCCACGGCAGAGGAGGTCAACTACATGTTGAAAAACAAAGGCTTGGAGGACAAGTATGCATGGGCTAAACATTTCAGGCCTAACTTATTTATTATATTAACCAAATATCAACCTTCTTTCAGATTCCCCCT--------------------------------------------------------- diff --git a/src/TEST/figtree.tre b/src/TEST/figtree.tre new file mode 100644 index 0000000..1df54c8 --- /dev/null +++ b/src/TEST/figtree.tre @@ -0,0 +1,170 @@ +#NEXUS + +Begin taxa; + Dimensions ntax=78; + Taxlabels + Acanthisitta + Vidua + Picathartes + Corvus + Menura + Dendrocolaptes + Sapayoa + Platycercus + Cacatua + Daptrius + Falco + Micrastur + Cariama + Todus + Brachypteracias + Galbula + Tockus + Trogon + Leptosomus + Colius + Urocolius + Phodilus + Tyto + Speotyto + Buteo + Pandion + Cathartes + Arenaria + Larus + Haematopus + Anhinga + Fregata + Balaeniceps + Pelecanus + Ciconia + Puffinus + Oceanites + Eudyptula + Gavia + Tauraco + Grus + Psophia + Heliornis + Coccyzus + Geococcyx + Choriotis + Eupodotis + Opisthocomus + Aegotheles + Streptoprocne + Hemiprocne + Colibri + Caprimulgus + Nyctibius_gr + Steatornis + Eurypyga + Rhynochetos + Geotrygon + Otidiphaps + Mesitornis + Monias + Pterocles + Syrrhaptes + Phaethon_le + Phoenicopterus + Podiceps + Megapodius + Gallus + Anas + Anseranas + Chauna + Apteryx + Casuarius + Dromaius + Tinamus + Eudromia + Rhea + Struthio + ; +End; + +Begin trees; + Translate + 1 Acanthisitta, + 2 Vidua, + 3 Picathartes, + 4 Corvus, + 5 Menura, + 6 Dendrocolaptes, + 7 Sapayoa, + 8 Platycercus, + 9 Cacatua, + 10 Daptrius, + 11 Falco, + 12 Micrastur, + 13 Cariama, + 14 Todus, + 15 Brachypteracias, + 16 Galbula, + 17 Tockus, + 18 Trogon, + 19 Leptosomus, + 20 Colius, + 21 Urocolius, + 22 Phodilus, + 23 Tyto, + 24 Speotyto, + 25 Buteo, + 26 Pandion, + 27 Cathartes, + 28 Arenaria, + 29 Larus, + 30 Haematopus, + 31 Anhinga, + 32 Fregata, + 33 Balaeniceps, + 34 Pelecanus, + 35 Ciconia, + 36 Puffinus, + 37 Oceanites, + 38 Eudyptula, + 39 Gavia, + 40 Tauraco, + 41 Grus, + 42 Psophia, + 43 Heliornis, + 44 Coccyzus, + 45 Geococcyx, + 46 Choriotis, + 47 Eupodotis, + 48 Opisthocomus, + 49 Aegotheles, + 50 Streptoprocne, + 51 Hemiprocne, + 52 Colibri, + 53 Caprimulgus, + 54 Nyctibius_gr, + 55 Steatornis, + 56 Eurypyga, + 57 Rhynochetos, + 58 Geotrygon, + 59 Otidiphaps, + 60 Mesitornis, + 61 Monias, + 62 Pterocles, + 63 Syrrhaptes, + 64 Phaethon_le, + 65 Phoenicopterus, + 66 Podiceps, + 67 Megapodius, + 68 Gallus, + 69 Anas, + 70 Anseranas, + 71 Chauna, + 72 Apteryx, + 73 Casuarius, + 74 Dromaius, + 75 Tinamus, + 76 Eudromia, + 77 Rhea, + 78 Struthio + ; +tree TREE1 = [&R] 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+End; + diff --git a/src/TEST/kingdoms.newnames.txt b/src/TEST/kingdoms.newnames.txt new file mode 100644 index 0000000..52ba727 --- /dev/null +++ b/src/TEST/kingdoms.newnames.txt @@ -0,0 +1,9 @@ +Animal +Archaea +Eubacteria +Fungi +Plant +Amoebozoa +Excavata +SAR + diff --git a/src/TEST/kingdoms.nex.tre b/src/TEST/kingdoms.nex.tre new file mode 100644 index 0000000..8aafd3d --- /dev/null +++ b/src/TEST/kingdoms.nex.tre @@ -0,0 +1,4 @@ +#NEXUS +Begin trees; + tree kingdoms = (Frankiaceae:4200.0,('Archaeoglobus.fulgidus.DSM4304':3806.01025,((((Theileriaparva:1626.042732,Andreaeobryaceae1:1626.027667):72.380184,Monocercomonoidessp:1698.422916):74.73122,Mastigamoebabalamuthi:1773.154136):7.937535,(Symsagitti:1295.717544,basGeastrumpectinatum:1295.703361):485.38006):2024.92):394.0); +end; diff --git a/src/TEST/kingdoms.oldnames.txt b/src/TEST/kingdoms.oldnames.txt new file mode 100644 index 0000000..c7c2224 --- /dev/null +++ b/src/TEST/kingdoms.oldnames.txt @@ -0,0 +1,9 @@ +Symsagitti +Archaeoglobus.fulgidus.DSM4304 +Frankiaceae +basGeastrumpectinatum +Andreaeobryaceae1 +Mastigamoebabalamuthi +Monocercomonoidessp +Theileriaparva + diff --git a/src/TEST/kingdoms.tre b/src/TEST/kingdoms.tre new file mode 100644 index 0000000..f488770 --- /dev/null +++ b/src/TEST/kingdoms.tre @@ -0,0 +1 @@ +(Frankiaceae:4200.0,('Archaeoglobus.fulgidus.DSM4304':3806.01025,((((Theileriaparva:1626.042732,Andreaeobryaceae1:1626.027667):72.380184,Monocercomonoidessp:1698.422916):74.73122,Mastigamoebabalamuthi:1773.154136):7.937535,(Symsagitti:1295.717544,basGeastrumpectinatum:1295.703361):485.38006):2024.92):394.0); diff --git a/src/TEST/knuckle_tree.tre b/src/TEST/knuckle_tree.tre new file mode 100644 index 0000000..0d77589 --- /dev/null +++ b/src/TEST/knuckle_tree.tre @@ -0,0 +1 @@ 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-0,0 +1,3 @@ +KIM = s28 s87 +THURSTON = s19 s21 +LEE = s292 s296 s307 diff --git a/src/TEST/mrca_OLD.txt b/src/TEST/mrca_OLD.txt new file mode 100644 index 0000000..3a2b431 --- /dev/null +++ b/src/TEST/mrca_OLD.txt @@ -0,0 +1,3 @@ +s28 s87 KIM +s19 s21 THURSTON +s292 s296 s307 LEE diff --git a/src/TEST/mrca_test.tre b/src/TEST/mrca_test.tre new file mode 100644 index 0000000..d493d9b --- /dev/null +++ b/src/TEST/mrca_test.tre @@ -0,0 +1 @@ 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diff --git a/src/TEST/named_mrca.txt b/src/TEST/named_mrca.txt new file mode 100644 index 0000000..0502871 --- /dev/null +++ b/src/TEST/named_mrca.txt @@ -0,0 +1 @@ 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diff --git a/src/TEST/newnames.txt b/src/TEST/newnames.txt new file mode 100644 index 0000000..4525657 --- /dev/null +++ b/src/TEST/newnames.txt @@ -0,0 +1,6 @@ +Cinclus_mexicanus +Anodorhynchus_hyacinthinus +Stellula_calliope +Anser_anser +Gallus_gallus + diff --git a/src/TEST/oldnames.txt b/src/TEST/oldnames.txt new file mode 100644 index 0000000..11ae26f --- /dev/null +++ b/src/TEST/oldnames.txt @@ -0,0 +1,6 @@ +TaxonA +TaxonB +TaxonC +TaxonD +TaxonE + diff --git a/src/TEST/phylip_examples/interleaved.phy b/src/TEST/phylip_examples/interleaved.phy new file mode 100644 index 0000000..f8b74cb --- /dev/null +++ b/src/TEST/phylip_examples/interleaved.phy @@ -0,0 +1,12 @@ +5 20 +TaxonA AAATTTCCCTGTCCC +TaxonB GCTCGAGGGGCCCCA +TaxonC ACGCTCCCCCTTAAA +TaxonD TCCTTGTTCAACTCC +TaxonE TTACTATTCCCCCCC + +TTTAA +AGACC +AATGA +GGTGG +GCCGG diff --git a/src/TEST/phylip_examples/interleaved2.phy b/src/TEST/phylip_examples/interleaved2.phy new file mode 100644 index 0000000..960f4db --- /dev/null +++ b/src/TEST/phylip_examples/interleaved2.phy @@ -0,0 +1,11 @@ +5 20 +TaxonA AAATTTCCCTGTCCC +TaxonB GCTCGAGGGGCCCCA +TaxonC ACGCTCCCCCTTAAA +TaxonD TCCTTGTTCAACTCC +TaxonE TTACTATTCCCCCCC +TTTAA +AGACC +AATGA +GGTGG +GCCGG diff --git a/src/TEST/phylip_examples/multiline.phy b/src/TEST/phylip_examples/multiline.phy new file mode 100644 index 0000000..5d6a261 --- /dev/null +++ b/src/TEST/phylip_examples/multiline.phy @@ -0,0 +1,11 @@ +5 20 +TaxonA AAATTTCCCTGTCCC + TTTAA +TaxonB GCTCGAGGGGCCCCA + AGACC +TaxonC ACGCTCCCCCTTAAA + AATGA +TaxonD TCCTTGTTCAACTCC + GGTGG +TaxonE TTACTATTCCCCCCC + GCCGG diff --git a/src/TEST/phylip_examples/simple.phy b/src/TEST/phylip_examples/simple.phy new file mode 100644 index 0000000..db3a970 --- /dev/null +++ b/src/TEST/phylip_examples/simple.phy @@ -0,0 +1,7 @@ +5 20 +TaxonA AAATTTCCCTGTCCCTTTAA +TaxonB GCTCGAGGGGCCCCAAGACC +TaxonC ACGCTCCCCCTTAAAAATGA +TaxonD TCCTTGTTCAACTCCGGTGG +TaxonE TTACTATTCCCCCCCGCCGG + diff --git a/src/TEST/phylip_examples/spaces.phy b/src/TEST/phylip_examples/spaces.phy new file mode 100644 index 0000000..41c37d9 --- /dev/null +++ b/src/TEST/phylip_examples/spaces.phy @@ -0,0 +1,7 @@ +5 20 +TaxonA AAATT TCCCT GTCCC TTTAA +TaxonB GCTCG AGGGG CCCCA AGACC +TaxonC ACGCT CCCCC TTAAA AATGA +TaxonD TCCTT GTTCA ACTCC GGTGG +TaxonE TTACT ATTCC CCCCC GCCGG + diff --git a/src/TEST/phylip_examples/spaces_int.phy b/src/TEST/phylip_examples/spaces_int.phy new file mode 100644 index 0000000..65e737d --- /dev/null +++ b/src/TEST/phylip_examples/spaces_int.phy @@ -0,0 +1,12 @@ +5 20 +TaxonA AAATT TCCCT +TaxonB GCTCG AGGGG +TaxonC ACGCT CCCCC +TaxonD TCCTT GTTCA +TaxonE TTACT ATTCC + +GTCCC TTTAA +CCCCA AGACC +TTAAA AATGA +ACTCC GGTGG +CCCCC GCCGG \ No newline at end of file diff --git a/src/TEST/phylip_examples/spaces_int2.phy b/src/TEST/phylip_examples/spaces_int2.phy new file mode 100644 index 0000000..e72bb89 --- /dev/null +++ b/src/TEST/phylip_examples/spaces_int2.phy @@ -0,0 +1,11 @@ +5 20 +TaxonA AAATT TCCCT +TaxonB GCTCG AGGGG +TaxonC ACGCT CCCCC +TaxonD TCCTT GTTCA +TaxonE TTACT ATTCC +GTCCC TTTAA +CCCCA AGACC +TTAAA AATGA +ACTCC GGTGG +CCCCC GCCGG diff --git a/src/TEST/phylip_examples/spaces_ml.phy b/src/TEST/phylip_examples/spaces_ml.phy new file mode 100644 index 0000000..fa90e56 --- /dev/null +++ b/src/TEST/phylip_examples/spaces_ml.phy @@ -0,0 +1,11 @@ +5 20 +TaxonA AAATT TCCCT GTCCC + TTTAA +TaxonB GCTCG AGGGG CCCCA + AGACC +TaxonC ACGCT CCCCC TTAAA + AATGA +TaxonD TCCTT GTTCA ACTCC + GGTGG +TaxonE TTACT ATTCC CCCCC + GCCGG diff --git a/src/TEST/phylip_examples/spaces_ml2.phy b/src/TEST/phylip_examples/spaces_ml2.phy new file mode 100644 index 0000000..913db1d --- /dev/null +++ b/src/TEST/phylip_examples/spaces_ml2.phy @@ -0,0 +1,11 @@ +5 20 +TaxonA AAATT TCCCT + GTCCC TTTAA +TaxonB GCTCG AGGGG + CCCCA AGACC +TaxonC ACGCT CCCCC + TTAAA AATGA +TaxonD TCCTT GTTCA + ACTCC GGTGG +TaxonE TTACT ATTCC + CCCCC GCCGG diff --git a/src/TEST/phylip_examples/test_phylip.sh b/src/TEST/phylip_examples/test_phylip.sh new file mode 100755 index 0000000..7296e08 --- /dev/null +++ b/src/TEST/phylip_examples/test_phylip.sh @@ -0,0 +1,11 @@ +#!/bin/bash + +INPUTDIR=/home/josephwb/Work/Phylogenetics/phyx/src +TOOL=$INPUTDIR/pxs2fa + + +for f in *.phy; do + echo -e "\nTesting file: " $f + #more $f + $TOOL -s $f +done diff --git a/src/TEST/polytomy.tre b/src/TEST/polytomy.tre new file mode 100644 index 0000000..914234e --- /dev/null +++ b/src/TEST/polytomy.tre @@ -0,0 +1 @@ +((TaxonX:0.13,(TaxonC:0.25,(TaxonA1:0.07,TaxonA2:0.08,TaxonA3:0.07)1.0:0.235,TaxonB:0.155)1.0:0.5,TaxonW:0.36)0.99:0.39,(TaxonD:0.23,TaxonE:0.16)0.94:0.3); diff --git a/src/TEST/protein_matrices/AA_5tax.NEX b/src/TEST/protein_matrices/AA_5tax.NEX new file mode 100644 index 0000000..94cb5e9 --- /dev/null +++ b/src/TEST/protein_matrices/AA_5tax.NEX @@ -0,0 +1,14 @@ +#NEXUS +BEGIN DATA; + DIMENSIONS NTAX=5 NCHAR=250; + FORMAT DATATYPE=PROTEIN INTERLEAVE=NO GAP=-; + MATRIX + +TaxonE AWWYHNTLNCRGWGEFRYLTHEFCCHWGNAFYHICHNYDNGPTTERFLTIQTWTARDRWCCKHSVHWNFQENFSTYGLKQRFQNQHSCNRHIVRQLWNNLRFFICICQIKRGKGNKCQFCILHYFIHLPSLACRLSYAFGYLRHNWFGTLTPYGFASPPNWYMRSEPSFGNSWNMAIQIANAFRTWKYRECGYSIKQSCDSTLMWPHRYWMIAQYTFQVTDSRTYDFITSSLVVYAFLCDAQARADCIDQ +TaxonD HWPYHNEWNQRGWGVFRYLTHEFMCHQHRLFYHICHNYDHGPTTERFKAITTWTAQDRWKSGHSVHGDFQENFCTYGMKMRFQNQHSCNRHIGRRLQNNLRFNYCYCQIKRYKGNKCQFVQLKVDIHDKSLAANLIAASMYLRHMWFGPLTPYGFAVPPNWMMVSGPSFGKSWHMQIQIRNAYVTWKYRGKGYSICQSPQNKLMWPNRYWMIEIYTFIVTDIRTALFIQISLSEYAFSCDFIPRQDMNWQ +TaxonC QVFYATEVNFRDIGSEGFLTCEFLDHFDAHEEKLLHNYVEKPWIEEPLWWRTRKRDDMYFSYHWDFLDFQENFDMHAYSMVMPQQHSYRFGEYRQVVNNLYYFNAGPMGHRQKMNNKQGCRMHYFIAYAQAQFNSGYHAEYLKMLSTGGLDLSGESSDPNWAKMSGESEGWSHWVAMLMRNYYRHGKSHGCKMFKHAYESEKLRCIGISSSGDQYCFTVRDSSGYRFDACVLECKTSLAACGHNANCGWP +TaxonB QVFYHNEVNCRWINEKGILTHEPLDHFDAHNQHILANNVETPVIYRPLWWRTRKAMDRWFYKTSVHWDFQERFDTHGYSMVAPQQQSCNRAEYRQVVNNLRRFIQPQDGHGRKMNVKQGCRMHYFIARASLEFNSGYHAEYLKQLWLGGLDFSGEKSMLNWAKMSGESEGWSHWVYMLMRNYYRHGKLHGCSHRKEALESEKLRCIGIMRWWKQYAFKVRDISGYRFDRCYLICKTLLYDDGCKANCNWP +TaxonA QVFTHNEVNCRWHIEKGILTHEPLDHFDAHNHHILANNVETPVIYRPLWWRTRKAMDMWFLKSSMHWDFQENFDTMAYSMHAPQQQSKHSAHYRQQVNNLRRFIQPQMGHGRKMNNKQGCRMHYFIAYASLQFNSLYHAEMLKQLWTGGLDFSGEKSMPNWAKMSGESEGWSHWVLMLMRNYYRHGKLHGCSHRKEILESEKLRRIGIMRWWKQYAFKVRDISGYRFDRGYFGCKTLLNDAGCKVNCNWP +; +end; + diff --git a/src/TEST/protein_matrices/AA_5tax.fa b/src/TEST/protein_matrices/AA_5tax.fa new file mode 100644 index 0000000..6fe8c3b --- /dev/null +++ b/src/TEST/protein_matrices/AA_5tax.fa @@ -0,0 +1,10 @@ +>TaxonE +AWWYHNTLNCRGWGEFRYLTHEFCCHWGNAFYHICHNYDNGPTTERFLTIQTWTARDRWCCKHSVHWNFQENFSTYGLKQRFQNQHSCNRHIVRQLWNNLRFFICICQIKRGKGNKCQFCILHYFIHLPSLACRLSYAFGYLRHNWFGTLTPYGFASPPNWYMRSEPSFGNSWNMAIQIANAFRTWKYRECGYSIKQSCDSTLMWPHRYWMIAQYTFQVTDSRTYDFITSSLVVYAFLCDAQARADCIDQ +>TaxonD +HWPYHNEWNQRGWGVFRYLTHEFMCHQHRLFYHICHNYDHGPTTERFKAITTWTAQDRWKSGHSVHGDFQENFCTYGMKMRFQNQHSCNRHIGRRLQNNLRFNYCYCQIKRYKGNKCQFVQLKVDIHDKSLAANLIAASMYLRHMWFGPLTPYGFAVPPNWMMVSGPSFGKSWHMQIQIRNAYVTWKYRGKGYSICQSPQNKLMWPNRYWMIEIYTFIVTDIRTALFIQISLSEYAFSCDFIPRQDMNWQ +>TaxonC +QVFYATEVNFRDIGSEGFLTCEFLDHFDAHEEKLLHNYVEKPWIEEPLWWRTRKRDDMYFSYHWDFLDFQENFDMHAYSMVMPQQHSYRFGEYRQVVNNLYYFNAGPMGHRQKMNNKQGCRMHYFIAYAQAQFNSGYHAEYLKMLSTGGLDLSGESSDPNWAKMSGESEGWSHWVAMLMRNYYRHGKSHGCKMFKHAYESEKLRCIGISSSGDQYCFTVRDSSGYRFDACVLECKTSLAACGHNANCGWP +>TaxonB +QVFYHNEVNCRWINEKGILTHEPLDHFDAHNQHILANNVETPVIYRPLWWRTRKAMDRWFYKTSVHWDFQERFDTHGYSMVAPQQQSCNRAEYRQVVNNLRRFIQPQDGHGRKMNVKQGCRMHYFIARASLEFNSGYHAEYLKQLWLGGLDFSGEKSMLNWAKMSGESEGWSHWVYMLMRNYYRHGKLHGCSHRKEALESEKLRCIGIMRWWKQYAFKVRDISGYRFDRCYLICKTLLYDDGCKANCNWP +>TaxonA +QVFTHNEVNCRWHIEKGILTHEPLDHFDAHNHHILANNVETPVIYRPLWWRTRKAMDMWFLKSSMHWDFQENFDTMAYSMHAPQQQSKHSAHYRQQVNNLRRFIQPQMGHGRKMNNKQGCRMHYFIAYASLQFNSLYHAEMLKQLWTGGLDFSGEKSMPNWAKMSGESEGWSHWVLMLMRNYYRHGKLHGCSHRKEILESEKLRRIGIMRWWKQYAFKVRDISGYRFDRGYFGCKTLLNDAGCKVNCNWP diff --git a/src/TEST/protein_matrices/AA_5tax.phy b/src/TEST/protein_matrices/AA_5tax.phy new file mode 100644 index 0000000..ec16a74 --- /dev/null +++ b/src/TEST/protein_matrices/AA_5tax.phy @@ -0,0 +1,16 @@ +5 250 +TaxonE AWWYHNTLNCRGWGEFRYLTHEFCCHWGNAFYHICHNYDNGPTTERFLTIQTWTARDRWCCKHSVHWNFQENFSTYGLKQRFQNQHSCNRHIVRQLWNNL + RFFICICQIKRGKGNKCQFCILHYFIHLPSLACRLSYAFGYLRHNWFGTLTPYGFASPPNWYMRSEPSFGNSWNMAIQIANAFRTWKYRECGYSIKQSCD + STLMWPHRYWMIAQYTFQVTDSRTYDFITSSLVVYAFLCDAQARADCIDQ +TaxonD HWPYHNEWNQRGWGVFRYLTHEFMCHQHRLFYHICHNYDHGPTTERFKAITTWTAQDRWKSGHSVHGDFQENFCTYGMKMRFQNQHSCNRHIGRRLQNNL + RFNYCYCQIKRYKGNKCQFVQLKVDIHDKSLAANLIAASMYLRHMWFGPLTPYGFAVPPNWMMVSGPSFGKSWHMQIQIRNAYVTWKYRGKGYSICQSPQ + NKLMWPNRYWMIEIYTFIVTDIRTALFIQISLSEYAFSCDFIPRQDMNWQ +TaxonC QVFYATEVNFRDIGSEGFLTCEFLDHFDAHEEKLLHNYVEKPWIEEPLWWRTRKRDDMYFSYHWDFLDFQENFDMHAYSMVMPQQHSYRFGEYRQVVNNL + YYFNAGPMGHRQKMNNKQGCRMHYFIAYAQAQFNSGYHAEYLKMLSTGGLDLSGESSDPNWAKMSGESEGWSHWVAMLMRNYYRHGKSHGCKMFKHAYES + EKLRCIGISSSGDQYCFTVRDSSGYRFDACVLECKTSLAACGHNANCGWP +TaxonB QVFYHNEVNCRWINEKGILTHEPLDHFDAHNQHILANNVETPVIYRPLWWRTRKAMDRWFYKTSVHWDFQERFDTHGYSMVAPQQQSCNRAEYRQVVNNL + RRFIQPQDGHGRKMNVKQGCRMHYFIARASLEFNSGYHAEYLKQLWLGGLDFSGEKSMLNWAKMSGESEGWSHWVYMLMRNYYRHGKLHGCSHRKEALES + EKLRCIGIMRWWKQYAFKVRDISGYRFDRCYLICKTLLYDDGCKANCNWP +TaxonA QVFTHNEVNCRWHIEKGILTHEPLDHFDAHNHHILANNVETPVIYRPLWWRTRKAMDMWFLKSSMHWDFQENFDTMAYSMHAPQQQSKHSAHYRQQVNNL + RRFIQPQMGHGRKMNNKQGCRMHYFIAYASLQFNSLYHAEMLKQLWTGGLDFSGEKSMPNWAKMSGESEGWSHWVLMLMRNYYRHGKLHGCSHRKEILES + EKLRRIGIMRWWKQYAFKVRDISGYRFDRGYFGCKTLLNDAGCKVNCNWP diff --git a/src/TEST/protein_matrices/AA_5tax_interleaved.NEX b/src/TEST/protein_matrices/AA_5tax_interleaved.NEX new file mode 100644 index 0000000..19b5f58 --- /dev/null +++ b/src/TEST/protein_matrices/AA_5tax_interleaved.NEX @@ -0,0 +1,31 @@ +#NEXUS + +Begin data; + Dimensions ntax=5 nchar=250; + Format datatype=protein interleave gap=-; + Matrix +TaxonE AWWYHNTLNCRGWGEFRYLTHEFCCHWGNAFYHICHNYDNGPTTERFLTIQTWTARDRWCCKHSVHWNFQENFST +TaxonD HWPYHNEWNQRGWGVFRYLTHEFMCHQHRLFYHICHNYDHGPTTERFKAITTWTAQDRWKSGHSVHGDFQENFCT +TaxonC QVFYATEVNFRDIGSEGFLTCEFLDHFDAHEEKLLHNYVEKPWIEEPLWWRTRKRDDMYFSYHWDFLDFQENFDM +TaxonB QVFYHNEVNCRWINEKGILTHEPLDHFDAHNQHILANNVETPVIYRPLWWRTRKAMDRWFYKTSVHWDFQERFDT +TaxonA QVFTHNEVNCRWHIEKGILTHEPLDHFDAHNHHILANNVETPVIYRPLWWRTRKAMDMWFLKSSMHWDFQENFDT + +TaxonE YGLKQRFQNQHSCNRHIVRQLWNNLRFFICICQIKRGKGNKCQFCILHYFIHLPSLACRLSYAFGYLRHNWFGTL +TaxonD YGMKMRFQNQHSCNRHIGRRLQNNLRFNYCYCQIKRYKGNKCQFVQLKVDIHDKSLAANLIAASMYLRHMWFGPL +TaxonC HAYSMVMPQQHSYRFGEYRQVVNNLYYFNAGPMGHRQKMNNKQGCRMHYFIAYAQAQFNSGYHAEYLKMLSTGGL +TaxonB HGYSMVAPQQQSCNRAEYRQVVNNLRRFIQPQDGHGRKMNVKQGCRMHYFIARASLEFNSGYHAEYLKQLWLGGL +TaxonA MAYSMHAPQQQSKHSAHYRQQVNNLRRFIQPQMGHGRKMNNKQGCRMHYFIAYASLQFNSLYHAEMLKQLWTGGL + +TaxonE TPYGFASPPNWYMRSEPSFGNSWNMAIQIANAFRTWKYRECGYSIKQSCDSTLMWPHRYWMIAQYTFQVTDSRTY +TaxonD TPYGFAVPPNWMMVSGPSFGKSWHMQIQIRNAYVTWKYRGKGYSICQSPQNKLMWPNRYWMIEIYTFIVTDIRTA +TaxonC DLSGESSDPNWAKMSGESEGWSHWVAMLMRNYYRHGKSHGCKMFKHAYESEKLRCIGISSSGDQYCFTVRDSSGY +TaxonB DFSGEKSMLNWAKMSGESEGWSHWVYMLMRNYYRHGKLHGCSHRKEALESEKLRCIGIMRWWKQYAFKVRDISGY +TaxonA DFSGEKSMPNWAKMSGESEGWSHWVLMLMRNYYRHGKLHGCSHRKEILESEKLRRIGIMRWWKQYAFKVRDISGY + +TaxonE DFITSSLVVYAFLCDAQARADCIDQ +TaxonD LFIQISLSEYAFSCDFIPRQDMNWQ +TaxonC RFDACVLECKTSLAACGHNANCGWP +TaxonB RFDRCYLICKTLLYDDGCKANCNWP +TaxonA RFDRGYFGCKTLLNDAGCKVNCNWP + ; +End; diff --git a/src/TEST/protein_matrices/AA_5tax_interleaved.phy b/src/TEST/protein_matrices/AA_5tax_interleaved.phy new file mode 100644 index 0000000..03d03c6 --- /dev/null +++ b/src/TEST/protein_matrices/AA_5tax_interleaved.phy @@ -0,0 +1,18 @@ +5 250 +TaxonE AWWYHNTLNCRGWGEFRYLTHEFCCHWGNAFYHICHNYDNGPTTERFLTIQTWTARDRWCCKHSVHWNFQENFSTYGLKQRFQNQHSCNRHIVRQLWNNL +TaxonD HWPYHNEWNQRGWGVFRYLTHEFMCHQHRLFYHICHNYDHGPTTERFKAITTWTAQDRWKSGHSVHGDFQENFCTYGMKMRFQNQHSCNRHIGRRLQNNL +TaxonC QVFYATEVNFRDIGSEGFLTCEFLDHFDAHEEKLLHNYVEKPWIEEPLWWRTRKRDDMYFSYHWDFLDFQENFDMHAYSMVMPQQHSYRFGEYRQVVNNL +TaxonB QVFYHNEVNCRWINEKGILTHEPLDHFDAHNQHILANNVETPVIYRPLWWRTRKAMDRWFYKTSVHWDFQERFDTHGYSMVAPQQQSCNRAEYRQVVNNL +TaxonA QVFTHNEVNCRWHIEKGILTHEPLDHFDAHNHHILANNVETPVIYRPLWWRTRKAMDMWFLKSSMHWDFQENFDTMAYSMHAPQQQSKHSAHYRQQVNNL + +RFFICICQIKRGKGNKCQFCILHYFIHLPSLACRLSYAFGYLRHNWFGTLTPYGFASPPNWYMRSEPSFGNSWNMAIQIANAFRTWKYRECGYSIKQSCD +RFNYCYCQIKRYKGNKCQFVQLKVDIHDKSLAANLIAASMYLRHMWFGPLTPYGFAVPPNWMMVSGPSFGKSWHMQIQIRNAYVTWKYRGKGYSICQSPQ +YYFNAGPMGHRQKMNNKQGCRMHYFIAYAQAQFNSGYHAEYLKMLSTGGLDLSGESSDPNWAKMSGESEGWSHWVAMLMRNYYRHGKSHGCKMFKHAYES +RRFIQPQDGHGRKMNVKQGCRMHYFIARASLEFNSGYHAEYLKQLWLGGLDFSGEKSMLNWAKMSGESEGWSHWVYMLMRNYYRHGKLHGCSHRKEALES +RRFIQPQMGHGRKMNNKQGCRMHYFIAYASLQFNSLYHAEMLKQLWTGGLDFSGEKSMPNWAKMSGESEGWSHWVLMLMRNYYRHGKLHGCSHRKEILES + +STLMWPHRYWMIAQYTFQVTDSRTYDFITSSLVVYAFLCDAQARADCIDQ +NKLMWPNRYWMIEIYTFIVTDIRTALFIQISLSEYAFSCDFIPRQDMNWQ +EKLRCIGISSSGDQYCFTVRDSSGYRFDACVLECKTSLAACGHNANCGWP +EKLRCIGIMRWWKQYAFKVRDISGYRFDRCYLICKTLLYDDGCKANCNWP +EKLRRIGIMRWWKQYAFKVRDISGYRFDRGYFGCKTLLNDAGCKVNCNWP diff --git a/src/TEST/protein_matrices/AA_5tax_multiline.phy b/src/TEST/protein_matrices/AA_5tax_multiline.phy new file mode 100644 index 0000000..ec16a74 --- /dev/null +++ b/src/TEST/protein_matrices/AA_5tax_multiline.phy @@ -0,0 +1,16 @@ +5 250 +TaxonE AWWYHNTLNCRGWGEFRYLTHEFCCHWGNAFYHICHNYDNGPTTERFLTIQTWTARDRWCCKHSVHWNFQENFSTYGLKQRFQNQHSCNRHIVRQLWNNL + RFFICICQIKRGKGNKCQFCILHYFIHLPSLACRLSYAFGYLRHNWFGTLTPYGFASPPNWYMRSEPSFGNSWNMAIQIANAFRTWKYRECGYSIKQSCD + STLMWPHRYWMIAQYTFQVTDSRTYDFITSSLVVYAFLCDAQARADCIDQ +TaxonD HWPYHNEWNQRGWGVFRYLTHEFMCHQHRLFYHICHNYDHGPTTERFKAITTWTAQDRWKSGHSVHGDFQENFCTYGMKMRFQNQHSCNRHIGRRLQNNL + RFNYCYCQIKRYKGNKCQFVQLKVDIHDKSLAANLIAASMYLRHMWFGPLTPYGFAVPPNWMMVSGPSFGKSWHMQIQIRNAYVTWKYRGKGYSICQSPQ + NKLMWPNRYWMIEIYTFIVTDIRTALFIQISLSEYAFSCDFIPRQDMNWQ +TaxonC QVFYATEVNFRDIGSEGFLTCEFLDHFDAHEEKLLHNYVEKPWIEEPLWWRTRKRDDMYFSYHWDFLDFQENFDMHAYSMVMPQQHSYRFGEYRQVVNNL + YYFNAGPMGHRQKMNNKQGCRMHYFIAYAQAQFNSGYHAEYLKMLSTGGLDLSGESSDPNWAKMSGESEGWSHWVAMLMRNYYRHGKSHGCKMFKHAYES + EKLRCIGISSSGDQYCFTVRDSSGYRFDACVLECKTSLAACGHNANCGWP +TaxonB QVFYHNEVNCRWINEKGILTHEPLDHFDAHNQHILANNVETPVIYRPLWWRTRKAMDRWFYKTSVHWDFQERFDTHGYSMVAPQQQSCNRAEYRQVVNNL + RRFIQPQDGHGRKMNVKQGCRMHYFIARASLEFNSGYHAEYLKQLWLGGLDFSGEKSMLNWAKMSGESEGWSHWVYMLMRNYYRHGKLHGCSHRKEALES + EKLRCIGIMRWWKQYAFKVRDISGYRFDRCYLICKTLLYDDGCKANCNWP +TaxonA QVFTHNEVNCRWHIEKGILTHEPLDHFDAHNHHILANNVETPVIYRPLWWRTRKAMDMWFLKSSMHWDFQENFDTMAYSMHAPQQQSKHSAHYRQQVNNL + RRFIQPQMGHGRKMNNKQGCRMHYFIAYASLQFNSLYHAEMLKQLWTGGLDFSGEKSMPNWAKMSGESEGWSHWVLMLMRNYYRHGKLHGCSHRKEILES + EKLRRIGIMRWWKQYAFKVRDISGYRFDRGYFGCKTLLNDAGCKVNCNWP diff --git a/src/TEST/protein_matrices/AA_good.phy b/src/TEST/protein_matrices/AA_good.phy new file mode 100644 index 0000000..a15014a --- /dev/null +++ b/src/TEST/protein_matrices/AA_good.phy @@ -0,0 +1,6 @@ +5 250 +TaxonE AWWYHNTLNCRGWGEFRYLTHEFCCHWGNAFYHICHNYDNGPTTERFLTIQTWTARDRWCCKHSVHWNFQENFSTYGLKQRFQNQHSCNRHIVRQLWNNLRFFICICQIKRGKGNKCQFCILHYFIHLPSLACRLSYAFGYLRHNWFGTLTPYGFASPPNWYMRSEPSFGNSWNMAIQIANAFRTWKYRECGYSIKQSCDSTLMWPHRYWMIAQYTFQVTDSRTYDFITSSLVVYAFLCDAQARADCIDQ +TaxonD HWPYHNEWNQRGWGVFRYLTHEFMCHQHRLFYHICHNYDHGPTTERFKAITTWTAQDRWKSGHSVHGDFQENFCTYGMKMRFQNQHSCNRHIGRRLQNNLRFNYCYCQIKRYKGNKCQFVQLKVDIHDKSLAANLIAASMYLRHMWFGPLTPYGFAVPPNWMMVSGPSFGKSWHMQIQIRNAYVTWKYRGKGYSICQSPQNKLMWPNRYWMIEIYTFIVTDIRTALFIQISLSEYAFSCDFIPRQDMNWQ +TaxonC QVFYATEVNFRDIGSEGFLTCEFLDHFDAHEEKLLHNYVEKPWIEEPLWWRTRKRDDMYFSYHWDFLDFQENFDMHAYSMVMPQQHSYRFGEYRQVVNNLYYFNAGPMGHRQKMNNKQGCRMHYFIAYAQAQFNSGYHAEYLKMLSTGGLDLSGESSDPNWAKMSGESEGWSHWVAMLMRNYYRHGKSHGCKMFKHAYESEKLRCIGISSSGDQYCFTVRDSSGYRFDACVLECKTSLAACGHNANCGWP +TaxonB QVFYHNEVNCRWINEKGILTHEPLDHFDAHNQHILANNVETPVIYRPLWWRTRKAMDRWFYKTSVHWDFQERFDTHGYSMVAPQQQSCNRAEYRQVVNNLRRFIQPQDGHGRKMNVKQGCRMHYFIARASLEFNSGYHAEYLKQLWLGGLDFSGEKSMLNWAKMSGESEGWSHWVYMLMRNYYRHGKLHGCSHRKEALESEKLRCIGIMRWWKQYAFKVRDISGYRFDRCYLICKTLLYDDGCKANCNWP +TaxonA QVFTHNEVNCRWHIEKGILTHEPLDHFDAHNHHILANNVETPVIYRPLWWRTRKAMDMWFLKSSMHWDFQENFDTMAYSMHAPQQQSKHSAHYRQQVNNLRRFIQPQMGHGRKMNNKQGCRMHYFIAYASLQFNSLYHAEMLKQLWTGGLDFSGEKSMPNWAKMSGESEGWSHWVLMLMRNYYRHGKLHGCSHRKEILESEKLRRIGIMRWWKQYAFKVRDISGYRFDRGYFGCKTLLNDAGCKVNCNWP diff --git a/src/TEST/protein_matrices/AA_small.NEX b/src/TEST/protein_matrices/AA_small.NEX new file mode 100644 index 0000000..a1fb4db --- /dev/null +++ b/src/TEST/protein_matrices/AA_small.NEX @@ -0,0 +1,14 @@ +#NEXUS +BEGIN DATA; + DIMENSIONS NTAX=5 NCHAR=20; + FORMAT DATATYPE=DNA INTERLEAVE=NO GAP=- MISSING=?; + MATRIX + +TaxonA AAATTTCCCTGTCCCTTTAA +TaxonB GCTCGAGGGGCCCCAAGACC +TaxonC ACGCTCCCCCTTAAAAATGA +TaxonD TCCTTGTTCAACTCCGGTGG +TaxonE TTACTATTCCCCCCCGCCGG +; +end; + diff --git a/src/TEST/run1.p b/src/TEST/run1.p new file mode 100644 index 0000000..0f0b4a7 --- /dev/null +++ b/src/TEST/run1.p @@ -0,0 +1,502 @@ +Gen LnL LnPr TL{all} r(A<->C){all} r(A<->G){all} r(A<->T){all} r(C<->G){all} r(C<->T){all} r(G<->T){all} pi(A){all} pi(C){all} pi(G){all} pi(T){all} alpha{all} pinvar{all} +0 -2.562053e+04 -3.796461e+01 9.333417e+00 1.289285e-02 5.594060e-01 2.744430e-02 1.497787e-02 2.943502e-01 9.092876e-02 3.459642e-01 4.425162e-01 6.023543e-02 1.512842e-01 6.663653e-01 3.814808e-01 +1 -2.562447e+04 -3.856619e+01 9.403918e+00 1.360440e-02 5.712996e-01 2.770746e-02 1.167338e-02 2.955978e-01 8.011734e-02 3.430474e-01 4.478519e-01 5.719984e-02 1.519008e-01 6.588726e-01 4.024021e-01 +2 -2.562016e+04 -3.998325e+01 9.569465e+00 1.271646e-02 5.758557e-01 2.643411e-02 1.380047e-02 2.879286e-01 8.326468e-02 3.408267e-01 4.528472e-01 5.788046e-02 1.484456e-01 6.633111e-01 4.045894e-01 +3 -2.561709e+04 -3.873663e+01 9.420863e+00 1.251896e-02 5.427183e-01 2.931556e-02 1.609952e-02 3.199818e-01 7.936586e-02 3.556605e-01 4.413730e-01 5.882298e-02 1.441436e-01 6.836047e-01 4.037010e-01 +4 -2.561935e+04 -3.906508e+01 9.468045e+00 1.094859e-02 5.160564e-01 2.567840e-02 1.494035e-02 3.195053e-01 1.128709e-01 3.519820e-01 4.393224e-01 6.229527e-02 1.464003e-01 6.076687e-01 3.947991e-01 +5 -2.562967e+04 -4.354418e+01 1.000517e+01 1.330310e-02 5.612329e-01 2.558913e-02 2.036484e-02 2.942368e-01 8.527317e-02 3.409938e-01 4.486071e-01 5.815242e-02 1.522467e-01 6.187035e-01 3.910847e-01 +6 -2.562089e+04 -3.387826e+01 8.871416e+00 1.330310e-02 5.612329e-01 2.615193e-02 2.036484e-02 2.942368e-01 8.471037e-02 3.370361e-01 4.560012e-01 5.815242e-02 1.488102e-01 6.875559e-01 4.051423e-01 +7 -2.562623e+04 -4.220094e+01 9.838135e+00 1.483780e-02 5.947876e-01 2.714551e-02 1.768750e-02 2.702738e-01 7.526783e-02 3.328264e-01 4.480307e-01 5.948090e-02 1.596620e-01 6.390249e-01 3.935644e-01 +8 -2.561525e+04 -4.376952e+01 1.002970e+01 1.029922e-02 5.348181e-01 3.333632e-02 1.147661e-02 3.289340e-01 8.113575e-02 3.540267e-01 4.440602e-01 6.123692e-02 1.406761e-01 6.456513e-01 3.875541e-01 +9 -2.563223e+04 -4.170071e+01 9.778203e+00 1.228279e-02 5.703954e-01 2.128166e-02 2.378896e-02 2.703680e-01 1.018832e-01 3.417515e-01 4.516524e-01 5.654221e-02 1.500539e-01 6.336308e-01 3.732779e-01 +10 -2.562097e+04 -4.051189e+01 9.640985e+00 1.329101e-02 5.524446e-01 2.654917e-02 1.337248e-02 2.989975e-01 9.534519e-02 3.424588e-01 4.415303e-01 6.219402e-02 1.538169e-01 5.891160e-01 3.835332e-01 +11 -2.563322e+04 -3.606246e+01 9.110211e+00 1.312139e-02 5.541498e-01 2.760911e-02 1.528000e-02 3.113450e-01 7.849463e-02 3.481109e-01 4.396855e-01 5.791029e-02 1.542933e-01 7.229616e-01 4.193255e-01 +12 -2.562753e+04 -3.559810e+01 9.063426e+00 1.301264e-02 5.291641e-01 3.129113e-02 1.819350e-02 3.280397e-01 8.029890e-02 3.611548e-01 4.297937e-01 6.189223e-02 1.471593e-01 6.751728e-01 3.947713e-01 +13 -2.562963e+04 -2.902413e+01 8.355304e+00 1.432265e-02 5.468834e-01 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+Begin taxa; + Dimensions ntax=33; + Taxlabels + 113_V_gryphus + 128_C_burrovianus + 135_C_aura + 31_C_melambrotus + 6_C_atratus + 97_S_papa + 9_G_californianus + Anas_clypeata + Anas_platyrhunchos + Apterodytes_patagonicus + Ardea_herodias + Asio_otus + Balaeniceps_rex + Bonasa_umbellus + Bucephala_abeola + Caracara_cheriway + Charadrius_alexandrinus + Ciconia_maguari + Ephippiorhynchus_senegalensis + Falco_femoralis + Falco_peregrinus + Falco_rusticolus + Fulmarus_glacialis + Gallus_gallus + Gavia_immer + Gyps_bengalensis + Larus_marinus + Lunda_cirrhata + Nyctanassa_violacea + Pandion + Pygoscelis_antarcticus + Sagittarius + Scopus_umbretta + ; +End; + +Begin trees; + Translate + 1 113_V_gryphus, + 2 128_C_burrovianus, + 3 135_C_aura, + 4 31_C_melambrotus, + 5 6_C_atratus, + 6 97_S_papa, + 7 9_G_californianus, + 8 Anas_clypeata, + 9 Anas_platyrhunchos, + 10 Apterodytes_patagonicus, + 11 Ardea_herodias, + 12 Asio_otus, + 13 Balaeniceps_rex, + 14 Bonasa_umbellus, + 15 Bucephala_abeola, + 16 Caracara_cheriway, + 17 Charadrius_alexandrinus, + 18 Ciconia_maguari, + 19 Ephippiorhynchus_senegalensis, + 20 Falco_femoralis, + 21 Falco_peregrinus, + 22 Falco_rusticolus, + 23 Fulmarus_glacialis, + 24 Gallus_gallus, + 25 Gavia_immer, + 26 Gyps_bengalensis, + 27 Larus_marinus, + 28 Lunda_cirrhata, + 29 Nyctanassa_violacea, + 30 Pandion, + 31 Pygoscelis_antarcticus, + 32 Sagittarius, + 33 Scopus_umbretta + ; +tree STATE_0 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-95143.48101001458,EEF_ucld_branchRates=-266.168517335019,lnP=-95143.48101001458,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=0.02234135338553881]:5.09961E0,9[&rate=0.02837737786871923]:5.09961E0)[&rate=0.08852504376910755]:4.69329E0,15[&rate=0.032172544376755666]:9.7929E0)[&rate=0.09048013234469902]:8.54202E1,(14[&rate=0.035178720277860634]:3.44813E1,24[&rate=0.03776392226896683]:3.44813E1)[&rate=0.09248621721034095]:6.07318E1)[&rate=0.09454809074648765]:1.90448E1,(((((19[&rate=0.040084625791642695]:7.55131E0,18[&rate=0.04222370293714232]:7.55131E0)[&rate=0.0966710180250762]:6.00086E1,((33[&rate=0.0442310403283049]:5.9902553E1,13[&rate=0.046139350448828095]:5.9902553E1)[&rate=0.0988608186246841]:7.11938E0,(11[&rate=0.04797145754430627]:1.4373533E1,29[&rate=0.04974406499292393]:1.4373533E1)[&rate=0.10112396417852913]:5.26484E1)[&rate=0.10346769579051854]:5.37977E-1)[&rate=0.10590016670797511]:1.74225E0,((10[&rate=0.05146987509034866]:1.0828134E1,31[&rate=0.05315886193965773]:1.0828134E1)[&rate=0.10843061735954053]:5.82947E1,23[&rate=0.05481907652257585]:6.9122834E1)[&rate=0.1110695922545826]:1.79326E-1)[&rate=0.11382921159990848]:2.10502E0,((12[&rate=0.05645717809392223]:6.697338E1,(((16[&rate=0.05807879781036426]:1.332987E1,((22[&rate=0.05968879545822361]:1.62809E0,21[&rate=0.06129144582349835]:1.62809E0)[&rate=0.11672351528643168]:1.80365E0,20[&rate=0.06289057748385585]:3.43174E0)[&rate=0.1197689038605611]:9.89813E0)[&rate=0.12298471138435389]:4.98254E1,((30[&rate=0.06448967869610779]:5.12196E1,26[&rate=0.06609198011174378]:5.12196E1)[&rate=0.1263939606029411]:4.75282E0,32[&rate=0.06770052095127599]:5.597242E1)[&rate=0.13002437475881606]:7.18285E0)[&rate=0.13390975820773335]:1.27429E0,((((3[&rate=0.06931820327112426]:7.55302E-1,4[&rate=0.0709478376436605]:7.55302E-1)[&rate=0.13809191947416302]:2.01528E-1,2[&rate=0.07259218269320954]:9.5683E-1)[&rate=0.14262341358753114]:5.45989E0,5[&rate=0.0742539803375295]:6.41672E0)[&rate=0.14757156021233067]:2.27674E0,((6[&rate=0.07593598818215795]:4.627846E0,7[&rate=0.07764101024517056]:4.627846E0)[&rate=0.15302452037296171]:5.82054E-1,1[&rate=0.0793719270149648]:5.2099E0)[&rate=0.1591008371574467]:3.48356E0)[&rate=0.16596510567742037]:5.57361E1)[&rate=0.1738551754505638]:2.54382E0)[&rate=0.18313278812845646]:2.6958E0,25[&rate=0.08113172574000375]:6.966918E1)[&rate=0.19438683381524174]:1.738E0)[&rate=0.20867186822964753]:1.19542E0,(17[&rate=0.08292353180254597]:6.23045E1,(27[&rate=0.08475064203020245]:2.25099E1,28[&rate=0.08661656249982545]:2.25099E1)[&rate=0.22816999477396083]:3.97946E1)[&rate=0.25868525683626453]:1.02981E1)[&rate=0.32857495943199877]:4.16553E1); +tree STATE_10000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-56308.71687692223,EEF_ucld_branchRates=-266.168517335019,lnP=-56308.71687692223,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=0.005534491954394902]:8.596895746744E0,9[&rate=0.006476945420290763]:8.596895746744E0)[&rate=0.006835020901839831]:3.032384263759E0,15[&rate=0.004352794078497458]:1.16292800105E1)[&rate=0.011212711932104791]:6.851096607266E1,(14[&rate=0.007645772656595157]:4.99695012098E1,24[&rate=0.006143348089517109]:4.99695012098E1)[&rate=0.018072692018208193]:3.017074487337E1)[&rate=0.005830274971774973]:1.442027489237E1,(((((16[&rate=0.002928032017243164]:4.210807596442E1,((22[&rate=0.0024072262652037697]:1.549492752481E0,21[&rate=0.0036404410747458127]:1.549492752481E0)[&rate=0.008922621906503293]:2.261615214524E0,20[&rate=0.005534491954394902]:3.811107967005E0)[&rate=0.009229706919276501]:3.829696799742E1)[&rate=0.016243033629421866]:2.201876165972E1,(((((7[&rate=0.0019354844181460513]:5.829894404142E0,6[&rate=0.00956021452714004]:5.829894404142E0)[&rate=0.013059901741520386]:1.021333411492E-1,1[&rate=0.005117427506153162]:5.932027745291E0)[&rate=0.008635804796088737]:6.819814522139E-1,5[&rate=0.003406190333899866]:6.614009197505E0)[&rate=0.0030498219983862637]:1.882138617846E0,((2[&rate=0.010736951750537327]:5.134828562982E-1,4[&rate=0.0028037943615721633]:5.134828562982E-1)[&rate=0.003523419329272991]:4.183153249012E-1,3[&rate=0.004352794078497458]:9.317981811994E-1)[&rate=0.00811310743292528]:7.564349634152E0)[&rate=0.004984362715054201]:5.554950460237E1,((30[&rate=0.006307353675970683]:5.98473025893E1,26[&rate=0.007645772656595157]:5.98473025893E1)[&rate=0.016243033629421866]:2.787352544865E0,32[&rate=0.0021066339878159555]:6.263465513416E1)[&rate=0.0014972565214994972]:1.410997283555E0)[&rate=0.02099716250471439]:8.118520642171E-2)[&rate=0.004599567279261122]:1.662481744732E1,12[&rate=0.006835020901839831]:8.075165507146E1)[&rate=0.00485385261927327]:3.082960411239E-1,((((33[&rate=0.006835020901839831]:6.646938092325E1,13[&rate=0.003993002111421824]:6.646938092325E1)[&rate=0.007873308757648982]:4.381140748727E0,((19[&rate=0.0028037943615721633]:4.343713885797E1,18[&rate=0.004475348849709203]:4.343713885797E1)[&rate=0.0072225191282240635]:2.720107977664E1,(11[&rate=0.0041118327610813995]:3.353586568833E1,29[&rate=0.0017395382194027587]:3.353586568833E1)[&rate=0.011746761284566068]:3.710235294627E1)[&rate=0.005117427506153162]:2.123030373659E-1)[&rate=0.0021066339878159555]:9.379442211574E0,((10[&rate=0.0019354844181460513]:7.500744597609E1,31[&rate=0.0031697867903832055]:7.500744597609E1)[&rate=0.012354858476480412]:4.983940272596E0,23[&rate=0.0041118327610813995]:7.999138624869E1)[&rate=0.013896932291208556]:2.385776348601E-1)[&rate=0.004725662532416282]:7.583656264776E-1,25[&rate=0.005680401878297703]:8.098832951003E1)[&rate=0.002262235854243648]:7.162160256006E-2)[&rate=0.010736951750537327]:1.38677068633E0,(17[&rate=0.0072225191282240635]:8.229208233817E1,(27[&rate=0.003757541471003611]:3.402763000855E1,28[&rate=0.009918060920863284]:3.402763000855E1)[&rate=0.005830274971774973]:4.826445232962E1)[&rate=0.003406190333899866]:1.546394607443E-1)[&rate=0.02794256433558149]:1.211379917662E1); +tree STATE_20000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55292.96881692097,EEF_ucld_branchRates=-266.168517335019,lnP=-55292.96881692097,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.5901600382069375E-4]:8.148091970122E0,9[&rate=8.961349023795466E-4]:8.148091970122E0)[&rate=5.593831989306519E-4]:3.275631792194E0,15[&rate=0.0010618207794870149]:1.142372376232E1)[&rate=0.0010618207794870149]:6.353637874456E1,(14[&rate=0.001016494541155432]:4.022064357962E1,24[&rate=0.001016494541155432]:4.022064357962E1)[&rate=0.002075626550811356]:3.473945892726E1)[&rate=0.004568586140453037]:1.420974794256E1,((((((30[&rate=7.634463046077018E-4]:6.040832871165E1,26[&rate=5.593831989306519E-4]:6.040832871165E1)[&rate=1.6608406432214607E-4]:2.68551119202E0,32[&rate=4.396977476677569E-4]:6.309383990367E1)[&rate=1.493784513081965E-4]:2.151742187668E0,((16[&rate=1.8216396979039352E-4]:4.480553589979E1,((22[&rate=0.002472512671490812]:1.459768404941E0,21[&rate=5.8757425971920247E-5]:1.459768404941E0)[&rate=0.0019254895191932859]:2.269723906498E0,20[&rate=6.285317632621968E-4]:3.729492311439E0)[&rate=8.603704421402534E-4]:4.107604358835E1)[&rate=0.00311832970148836]:2.027915130553E1,((((2[&rate=0.0012790316789111878]:4.906968682397E-1,4[&rate=0.0036549517900329284]:4.906968682397E-1)[&rate=5.378832160045775E-4]:5.676093650878E-1,3[&rate=0.0017967188835400997]:1.058306233328E0)[&rate=7.341031235014077E-4]:6.324361737722E0,5[&rate=3.052980314366944E-4]:7.38266797105E0)[&rate=3.052980314366944E-4]:1.092835624258E0,((7[&rate=3.8673659576297887E-4]:5.463006079877E0,6[&rate=3.8673659576297887E-4]:5.463006079877E0)[&rate=0.006988817954099029]:3.900051826173E-1,1[&rate=6.791476359934216E-4]:5.853011262494E0)[&rate=0.0012183511429375833]:2.622492332813E0)[&rate=2.897300845612171E-4]:5.660918361001E1)[&rate=0.00311832970148836]:1.608948860178E-1)[&rate=4.0398146467410213E-4]:1.64142794102E1,12[&rate=8.961349023795466E-4]:8.165986150153E1)[&rate=8.603704421402534E-4]:3.921862625682E-1,((((19[&rate=2.2855270088779914E-4]:5.019236493502E1,18[&rate=4.396977476677569E-4]:5.019236493502E1)[&rate=4.96883043656718E-4]:2.123519840185E1,((11[&rate=1.493784513081965E-4]:3.574260855447E1,29[&rate=1.1235304243657387E-4]:3.574260855447E1)[&rate=6.53340018073036E-4]:3.550524726692E1,(33[&rate=7.060378818120524E-4]:5.663892515255E1,13[&rate=4.582401070182594E-4]:5.663892515255E1)[&rate=3.052980314366944E-4]:1.460893066884E1)[&rate=0.001417336256920313]:1.797075154806E-1)[&rate=8.988447211996303E-5]:8.529391553883E0,((10[&rate=1.3168747146050748E-4]:7.316224812334E1,31[&rate=2.4377980242280156E-4]:7.316224812334E1)[&rate=0.0017967188835400997]:6.60957739429E0,23[&rate=4.7728854160503515E-4]:7.977182551763E1)[&rate=3.3704975445673983E-4]:1.851293731268E-1)[&rate=0.001684491288810692]:1.349247149708E0,25[&rate=7.341031235014077E-4]:8.130620204047E1)[&rate=2.2855270088779914E-4]:7.458457236368E-1)[&rate=0.001684491288810692]:1.721290954872E0,(17[&rate=8.961349023795466E-4]:8.323703559363E1,(27[&rate=3.5330390907476177E-4]:3.028723925019E1,28[&rate=0.0012790316789111878]:3.028723925019E1)[&rate=4.7728854160503515E-4]:5.294979634344E1)[&rate=6.285317632621968E-4]:5.363031253448E-1)[&rate=0.0013450625660334492]:5.396511730463E0); +tree STATE_30000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55165.13591323536,EEF_ucld_branchRates=-266.168517335019,lnP=-55165.13591323536,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.6359196488894883E-4]:9.264319876363E0,9[&rate=4.8545212747031337E-4]:9.264319876363E0)[&rate=3.6357824522326285E-4]:3.161876099649E0,15[&rate=4.995494111558678E-4]:1.242619597601E1)[&rate=7.115600569873193E-4]:6.38826989606E1,(14[&rate=0.0012876842754695054]:3.546954464833E1,24[&rate=6.92492891567586E-4]:3.546954464833E1)[&rate=0.002106389978854149]:4.083935028828E1)[&rate=0.0024586280710127604]:1.947233729943E1,(((((19[&rate=2.2972656836234444E-4]:4.919963633228E1,18[&rate=4.7153404059156084E-4]:4.919963633228E1)[&rate=3.6357824522326285E-4]:2.573124806917E1,((33[&rate=8.677062759495942E-4]:5.217414694573E1,13[&rate=5.138502622881336E-4]:5.217414694573E1)[&rate=1.615578440496492E-4]:2.259003989486E1,(11[&rate=3.770080206645897E-4]:3.480823158651E1,29[&rate=3.0846897647169105E-4]:3.480823158651E1)[&rate=8.943404467656337E-4]:3.995595525408E1)[&rate=9.521726263858471E-4]:1.666975608578E-1)[&rate=1.2033190569110708E-4]:9.855072652572E0,((10[&rate=1.615578440496492E-4]:7.247824013981E1,31[&rate=2.6359196488894883E-4]:7.247824013981E1)[&rate=7.951378614453684E-4]:1.157710757657E1,23[&rate=3.3641126981943936E-4]:8.405534771639E1)[&rate=0.0012876842754695054]:7.306093376306E-1)[&rate=7.730085583765644E-4]:1.73510481065E0,((((16[&rate=3.770080206645897E-4]:4.532702230922E1,((22[&rate=0.0017290583901739005]:1.752068175749E0,21[&rate=7.730085583765644E-4]:1.752068175749E0)[&rate=4.577708626551919E-4]:2.69987735171E0,20[&rate=6.740359859521338E-4]:4.451945527459E0)[&rate=0.0010925038989306256]:4.087507678176E1)[&rate=0.0010535867374189198]:2.337988248916E1,(((30[&rate=6.561393335494123E-4]:6.282025399368E1,26[&rate=3.0846897647169105E-4]:6.282025399368E1)[&rate=0.001423116709694369]:3.540204300138E0,32[&rate=2.2972656836234444E-4]:6.636045829381E1)[&rate=0.002106389978854149]:1.981102200455E0,((((2[&rate=4.4413808176659687E-4]:6.766996347332E-1,4[&rate=0.0010535867374189198]:6.766996347332E-1)[&rate=6.218489129232431E-4]:8.242558732462E-1,3[&rate=4.0376605201700297E-4]:1.500955507979E0)[&rate=0.0010174661934869889]:6.767887570689E0,5[&rate=4.4413808176659687E-4]:8.268843078668E0)[&rate=8.943404467656337E-4]:7.114075959876E-1,((7[&rate=3.0846897647169105E-4]:6.124204126274E0,6[&rate=6.218489129232431E-4]:6.124204126274E0)[&rate=5.735952748534499E-4]:6.891806027751E-1,1[&rate=4.3061061924309365E-4]:6.813384729049E0)[&rate=7.730085583765644E-4]:2.166865945606E0)[&rate=5.735952748534499E-4]:5.936130981961E1)[&rate=0.002106389978854149]:3.653443041051E-1)[&rate=8.943404467656337E-4]:1.643652216512E1,12[&rate=7.730085583765644E-4]:8.514342696349E1)[&rate=2.105099934427916E-4]:7.625859014056E-1,25[&rate=5.735952748534499E-4]:8.59060128649E1)[&rate=6.92492891567586E-4]:6.150489997703E-1)[&rate=0.001231393537232744]:2.599178698858E0,(17[&rate=6.387574895090293E-4]:8.747877344964E1,(27[&rate=4.995494111558678E-4]:3.157521799873E1,28[&rate=0.001231393537232744]:3.157521799873E1)[&rate=5.283794181886187E-4]:5.590355545091E1)[&rate=0.0015069148660890102]:1.641467113886E0)[&rate=0.0011807293218386024]:6.660991672513E0); +tree STATE_40000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55164.40851956385,EEF_ucld_branchRates=-266.168517335019,lnP=-55164.40851956385,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=0.0011172754989913194]:8.741058510332E0,9[&rate=7.68570643099146E-4]:8.741058510332E0)[&rate=6.315567728949794E-4]:6.169412441235E0,15[&rate=3.5080790352272345E-4]:1.491047095157E1)[&rate=0.0012556710282048617]:6.689595472873E1,(14[&rate=0.0012556710282048617]:4.033972840346E1,24[&rate=0.001182314307846734]:4.033972840346E1)[&rate=0.002100614441328816]:4.146669727684E1)[&rate=0.0024361620524523835]:2.167305773874E1,(((((19[&rate=2.9943740688101537E-4]:5.495296246912E1,18[&rate=2.0598214189987413E-4]:5.495296246912E1)[&rate=5.06457372835073E-4]:2.895136673982E1,((33[&rate=6.315567728949794E-4]:6.97621853631E1,13[&rate=3.2457396752303335E-4]:6.97621853631E1)[&rate=2.6337125207169857E-4]:1.365423625848E1,(11[&rate=2.9943740688101537E-4]:3.344209599268E1,29[&rate=3.6439922783118036E-4]:3.344209599268E1)[&rate=7.68570643099146E-4]:4.99743256289E1)[&rate=4.711396027530816E-4]:4.879075873604E-1)[&rate=2.4014003740296973E-4]:6.851452305342E0,((10[&rate=1.4830708734342888E-4]:7.256233335092E1,31[&rate=1.8327953357615866E-4]:7.256233335092E1)[&rate=0.0015517721000181135]:1.816014927111E1,23[&rate=3.7834248185515185E-4]:9.072248262203E1)[&rate=0.0018674732650384566]:3.329889224878E-2)[&rate=1.2323539227199787E-4]:1.622216240206E0,((((16[&rate=1.0955784928761159E-4]:4.235485497233E1,((22[&rate=6.082816797258076E-4]:2.740364060985E0,21[&rate=2.2869166867731463E-4]:2.740364060985E0)[&rate=0.002100614441328816]:2.603003757871E0,20[&rate=5.251481572020213E-4]:5.343367818856E0)[&rate=0.0010063278723949052]:3.701148715348E1)[&rate=0.0015517721000181135]:3.152663331729E1,(((30[&rate=4.5440902377667016E-4]:6.717748449857E1,26[&rate=4.2257922808644016E-4]:6.717748449857E1)[&rate=9.583524799252688E-4]:3.367140557011E0,32[&rate=2.9943740688101537E-4]:7.054462505558E1)[&rate=5.446050943313448E-4]:2.944910957558E0,((((2[&rate=3.1188067212229315E-4]:9.092531822116E-1,4[&rate=1.6018619457708092E-4]:9.092531822116E-1)[&rate=9.446777160936877E-5]:9.594652545698E-1,3[&rate=3.375414277389524E-4]:1.868718436781E0)[&rate=8.362409196066144E-4]:7.354448187E0,5[&rate=1.3605185556881633E-4]:9.223166623781E0)[&rate=8.012618111416493E-4]:5.61355952233E-1,((7[&rate=2.2869166867731463E-4]:6.673546883073E0,6[&rate=0.002100614441328816]:6.673546883073E0)[&rate=3.375414277389524E-4]:1.195895747114E0,1[&rate=1.8327953357615866E-4]:7.869442630188E0)[&rate=9.143706693003936E-4]:1.915079945826E0)[&rate=5.446050943313448E-4]:6.370501343712E1)[&rate=7.670912175908314E-5]:3.919522764837E-1)[&rate=6.560251296036593E-4]:1.459981216866E1,12[&rate=6.315567728949794E-4]:8.848130045828E1)[&rate=1.8327953357615866E-4]:2.864413919697E0,25[&rate=4.2257922808644016E-4]:9.134571437798E1)[&rate=7.670912175908314E-5]:1.032283376508E0)[&rate=6.082816797258076E-4]:1.482450058364E0,(17[&rate=7.379065807715135E-4]:8.90395740596E1,(27[&rate=4.884726289823178E-4]:3.040152860707E1,28[&rate=9.583524799252688E-4]:3.040152860707E1)[&rate=4.2257922808644016E-4]:5.863804545253E1)[&rate=2.2869166867731463E-4]:4.820873753251E0)[&rate=0.0013394661671240126]:9.619035606182E0); +tree STATE_50000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55143.704581966114,EEF_ucld_branchRates=-266.168517335019,lnP=-55143.704581966114,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.6522218666579823E-4]:7.699154395384E0,9[&rate=0.0011592656155629065]:7.699154395384E0)[&rate=6.501571003684036E-4]:8.155426729061E0,15[&rate=1.3276384501042284E-4]:1.585458112444E1)[&rate=0.0013881994856905953]:6.675115960128E1,(14[&rate=0.00227329106029058]:3.7665593814E1,24[&rate=0.0011592656155629065]:3.7665593814E1)[&rate=0.0015451193198280854]:4.494014691173E1)[&rate=0.0025815751125833446]:1.614104995265E1,(((((19[&rate=4.4239302624584856E-4]:3.887654952568E1,18[&rate=2.803404141042831E-4]:3.887654952568E1)[&rate=3.534995941938539E-4]:3.564299175777E1,((33[&rate=8.373924637354559E-4]:6.233385664304E1,13[&rate=5.563925906893235E-4]:6.233385664304E1)[&rate=2.1708723245547778E-4]:1.15498020581E1,(11[&rate=3.389878609469412E-4]:2.920808762624E1,29[&rate=4.734516190416763E-4]:2.920808762624E1)[&rate=0.0010313031823846908]:4.46755710749E1)[&rate=3.0988944085687215E-4]:6.358825823108E-1)[&rate=6.303090813469045E-4]:5.604954051638E0,((10[&rate=1.5874026777950106E-4]:5.657502814738E1,31[&rate=4.2720300213809723E-4]:5.657502814738E1)[&rate=8.105182733713689E-4]:2.333457331444E1,23[&rate=5.221596566581489E-4]:7.990960146182E1)[&rate=9.941728186129964E-4]:2.148938732701E-1)[&rate=3.389878609469412E-4]:1.032789550385E0,(25[&rate=5.05602326471683E-4]:8.035008671512E1,((((((2[&rate=1.9941639597352944E-4]:1.136290492417E0,4[&rate=0.0013224068672080007]:1.136290492417E0)[&rate=0.0011134592924492552]:1.763098417968E-1,3[&rate=0.0017530482908197703]:1.312600334214E0)[&rate=4.2720300213809723E-4]:6.657540543929E0,5[&rate=6.110524434104949E-4]:7.970140878143E0)[&rate=6.918303417018396E-4]:7.20440912289E-1,((7[&rate=0.0011592656155629065]:6.10673297717E0,6[&rate=5.741346893582827E-4]:6.10673297717E0)[&rate=1.9941639597352944E-4]:1.535525195056E0,1[&rate=8.105182733713689E-4]:7.642258172226E0)[&rate=2.803404141042831E-4]:1.048323618206E0)[&rate=3.534995941938539E-4]:6.000147903396E1,(((30[&rate=7.848172861287641E-4]:5.830711646885E1,26[&rate=4.893761795231981E-4]:5.830711646885E1)[&rate=0.0010709477857820497]:4.453107613383E0,32[&rate=4.2720300213809723E-4]:6.276022408223E1)[&rate=5.741346893582827E-4]:4.321675039833E0,(16[&rate=3.8265163820766767E-4]:3.69788883264E1,((22[&rate=0.00227329106029058]:1.950727134969E0,21[&rate=4.734516190416763E-4]:1.950727134969E0)[&rate=0.0025815751125833446]:2.833066579873E0,20[&rate=0.0017530482908197703]:4.783793714842E0)[&rate=0.0014617939620790276]:3.219509461156E1)[&rate=0.0014617939620790276]:3.010301079566E1)[&rate=1.5874026777950106E-4]:1.610161702325E0)[&rate=7.137696646102572E-4]:9.722438860072E0,12[&rate=7.848172861287641E-4]:7.841449968446E1)[&rate=2.3376419623485805E-4]:1.935587030665E0)[&rate=6.918303417018396E-4]:8.071981703492E-1)[&rate=8.373924637354559E-4]:2.433008171612E0,(17[&rate=9.263254625461475E-4]:7.864666213244E1,(27[&rate=4.734516190416763E-4]:2.653606938907E1,28[&rate=9.592627453772064E-4]:2.653606938907E1)[&rate=6.70646078063514E-4]:5.211059274337E1)[&rate=2.803404141042831E-4]:4.943630924648E0)[&rate=0.0017530482908197703]:1.51564976213E1); +tree STATE_60000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55128.43264471028,EEF_ucld_branchRates=-266.168517335019,lnP=-55128.43264471028,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=0.0014137690120696407]:6.618450029667E0,9[&rate=0.0012590800087104435]:6.618450029667E0)[&rate=1.5595757378044685E-4]:8.505965420493E0,15[&rate=6.022443667337674E-4]:1.512441545016E1)[&rate=0.0010463813464534144]:7.386935309626E1,(14[&rate=8.687774435406573E-4]:3.882221815901E1,24[&rate=9.672306977051902E-4]:3.882221815901E1)[&rate=0.0011412109637408158]:5.017155038741E1)[&rate=0.001330523661230903]:8.216040928987E0,(((((19[&rate=3.49716491713515E-4]:3.56148351938E1,18[&rate=3.869149769191827E-4]:3.56148351938E1)[&rate=4.5162288998982727E-4]:3.628877320041E1,((33[&rate=9.672306977051902E-4]:6.145046701581E1,13[&rate=3.37442363248515E-4]:6.145046701581E1)[&rate=2.0786429950841025E-4]:9.681327818071E0,(11[&rate=2.363945861999226E-4]:2.477407200355E1,29[&rate=4.2519456353245523E-4]:2.477407200355E1)[&rate=8.993816356351439E-4]:4.635772283033E1)[&rate=5.222607428139351E-4]:7.718135603272E-1)[&rate=2.628474826314998E-4]:5.040321122993E0,((10[&rate=4.2519456353245523E-4]:4.742720324756E1,31[&rate=2.628474826314998E-4]:4.742720324756E1)[&rate=5.529056617005928E-4]:2.79700344561E1,23[&rate=3.995235108008269E-4]:7.539723770367E1)[&rate=6.022443667337674E-4]:1.546691813533E0)[&rate=3.129115300916073E-4]:8.857494375281E-1,(25[&rate=5.529056617005928E-4]:7.710185743343E1,(((16[&rate=3.129115300916073E-4]:3.67407104529E1,((22[&rate=0.0016357726787091162]:2.117079179622E0,21[&rate=4.5162288998982727E-4]:2.117079179622E0)[&rate=0.002016757395627807]:2.245458560114E0,20[&rate=6.964407635161496E-4]:4.362537739737E0)[&rate=0.0010914712782616606]:3.237817271317E1)[&rate=0.0012590800087104435]:2.853869078904E1,(((30[&rate=8.400263789872712E-4]:5.513457091006E1,26[&rate=5.688648391815664E-4]:5.513457091006E1)[&rate=0.002376196027660009]:3.26641187757E0,32[&rate=5.075084716948852E-4]:5.840098278763E1)[&rate=2.363945861999226E-4]:6.282540406919E0,((((2[&rate=1.9228135695119827E-4]:1.172568540085E0,4[&rate=0.0015131438687149806]:1.172568540085E0)[&rate=0.0011966201356656719]:2.435409656152E-1,3[&rate=1.323664321733681E-4]:1.4161095057E0)[&rate=4.789947798668154E-4]:6.296559236964E0,5[&rate=2.0786429950841025E-4]:7.712668742664E0)[&rate=4.3830260927248924E-4]:1.009280399811E0,((7[&rate=5.688648391815664E-4]:5.099550134522E0,6[&rate=3.620358616172635E-4]:5.099550134522E0)[&rate=3.995235108008269E-4]:1.434182132026E0,1[&rate=1.323664321733681E-4]:6.533732266548E0)[&rate=6.022443667337674E-4]:2.188216875927E0)[&rate=4.3830260927248924E-4]:5.596157405207E1)[&rate=7.176060184719216E-4]:5.958780473966E-1)[&rate=9.320957431010094E-4]:8.359094353625E0,12[&rate=7.397286261442928E-4]:7.363849559557E1)[&rate=1.7526563220331728E-4]:3.463361837858E0)[&rate=6.964407635161496E-4]:7.278215212991E-1)[&rate=3.869149769191827E-4]:3.184956058222E0,(17[&rate=7.872592771710153E-4]:7.699765944001E1,(27[&rate=2.881693697215938E-4]:3.038622607528E1,28[&rate=8.129139709977752E-4]:3.038622607528E1)[&rate=6.761454729012033E-4]:4.661143336473E1)[&rate=7.176060184719216E-4]:4.016975572936E0)[&rate=0.0032478254431917613]:1.619517446246E1); +tree STATE_70000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55128.39268554542,EEF_ucld_branchRates=-266.168517335019,lnP=-55128.39268554542,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.585151191018052E-4]:7.032541395121E0,9[&rate=9.991853598961575E-4]:7.032541395121E0)[&rate=3.865649825755008E-4]:1.08805176202E1,15[&rate=4.7363474150521006E-4]:1.791305901532E1)[&rate=0.0010386303178376883]:8.238468646083E1,(14[&rate=0.0012933687039236462]:3.951857233359E1,24[&rate=0.0017558550219353194]:3.951857233359E1)[&rate=0.001232392962379348]:6.077917314257E1)[&rate=0.001081123345290904]:9.012038681597E0,(((((19[&rate=3.453625773359237E-4]:3.916050321747E1,18[&rate=1.2526913731134655E-4]:3.916050321747E1)[&rate=6.673989472034059E-4]:3.790447565753E1,((33[&rate=7.334557059476996E-4]:6.233326711542E1,13[&rate=3.317882691462321E-4]:6.233326711542E1)[&rate=2.348439707193408E-4]:1.364220077653E1,(11[&rate=1.2526913731134655E-4]:2.859464151889E1,29[&rate=4.436738896942883E-4]:2.859464151889E1)[&rate=0.001081123345290904]:4.738082637306E1)[&rate=6.082249417209873E-4]:1.089510983049E0)[&rate=2.634514219173201E-4]:3.414147767797E0,((10[&rate=2.0429023979000657E-4]:4.387104585847E1,31[&rate=4.585151191018052E-4]:4.387104585847E1)[&rate=4.1472035193700513E-4]:3.576824370918E1,23[&rate=4.7363474150521006E-4]:7.963928956765E1)[&rate=4.290843580905898E-4]:8.398370751511E-1)[&rate=4.585151191018052E-4]:1.351671216344E0,(25[&rate=6.673989472034059E-4]:8.076070918802E1,(((16[&rate=2.0429023979000657E-4]:3.718437644673E1,((22[&rate=0.001910571731701351]:2.330079868284E0,21[&rate=1.4963497568257263E-4]:2.330079868284E0)[&rate=0.0023971938501102076]:2.567394902743E0,20[&rate=5.048203099648665E-4]:4.897474771027E0)[&rate=0.0013615566803819605]:3.22869016757E1)[&rate=0.0014387383839769004]:3.237326380908E1,(((((2[&rate=8.08485808607798E-4]:9.188496499608E-1,4[&rate=0.0016312411806085512]:9.188496499608E-1)[&rate=8.955155296445328E-4]:6.047355529877E-1,3[&rate=5.897555638752528E-4]:1.523585202948E0)[&rate=0.0014387383839769004]:6.40542692094E0,5[&rate=2.634514219173201E-4]:7.929012123889E0)[&rate=1.4963497568257263E-4]:2.254986538086E0,((7[&rate=5.897555638752528E-4]:5.853653732987E0,6[&rate=6.673989472034059E-4]:5.853653732987E0)[&rate=2.1989638793561787E-4]:1.41691958048E0,1[&rate=5.374657016927087E-4]:7.270573313467E0)[&rate=0.0013615566803819605]:2.913425348508E0)[&rate=3.727209984266885E-4]:5.841559306923E1,((30[&rate=9.279268936306056E-4]:5.663785197227E1,26[&rate=5.897555638752528E-4]:5.663785197227E1)[&rate=0.0023971938501102076]:6.153054673628E0,32[&rate=5.374657016927087E-4]:6.27909066459E1)[&rate=2.9106304110590935E-4]:5.808685085304E0)[&rate=7.573431845976776E-4]:9.580485246114E-1)[&rate=7.823167187383624E-4]:5.910647941656E0,12[&rate=7.573431845976776E-4]:7.546828819747E1)[&rate=2.348439707193408E-4]:5.29242099055E0)[&rate=0.001177317694370326]:1.070088671124E0)[&rate=4.0055591622184164E-4]:3.633321181933E0,(17[&rate=8.359755761404912E-4]:8.059604028382E1,(27[&rate=3.0467905577474715E-4]:3.141525951505E1,28[&rate=9.623929024170825E-4]:3.141525951505E1)[&rate=4.1472035193700513E-4]:4.918078076877E1)[&rate=8.08485808607798E-4]:4.868078757258E0)[&rate=0.004017527639800529]:2.384566511667E1); +tree STATE_80000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.33526278501,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.33526278501,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.572370751255679E-4]:7.053178927989E0,9[&rate=0.0016764508662859918]:7.053178927989E0)[&rate=7.154896369662258E-4]:8.134390999851E0,15[&rate=5.694066029450496E-4]:1.518756992784E1)[&rate=9.605211148433177E-4]:8.544462498537E1,(14[&rate=0.0011115825038663016]:3.715222519975E1,24[&rate=0.0013625458846234508]:3.715222519975E1)[&rate=8.702236079192744E-4]:6.347996971345E1)[&rate=6.725944714318667E-4]:1.019378237013E1,(((((19[&rate=4.6140445450211753E-4]:3.455628063528E1,18[&rate=5.212040391490219E-4]:3.455628063528E1)[&rate=4.973657499945528E-4]:4.029772177115E1,((33[&rate=8.129508769081095E-4]:6.166522114308E1,13[&rate=3.852906410751996E-4]:6.166522114308E1)[&rate=3.252651716419258E-4]:1.254373339654E1,(11[&rate=3.252651716419258E-4]:2.562329620124E1,29[&rate=2.3485374516229548E-4]:2.562329620124E1)[&rate=7.953324371537528E-4]:4.858565833838E1)[&rate=7.305203322605673E-4]:6.450478668111E-1)[&rate=3.568994232488353E-4]:1.446816266886E0,((10[&rate=5.331564871629184E-4]:3.35465594785E1,31[&rate=4.1173052406031773E-4]:3.35465594785E1)[&rate=2.6436129441352894E-4]:4.166419939419E1,23[&rate=5.331564871629184E-4]:7.521075887269E1)[&rate=5.572370751255679E-4]:1.090059800628E0)[&rate=5.941054270209015E-4]:2.648137848497E0,(25[&rate=9.360731917722879E-4]:7.829733980093E1,(((16[&rate=2.3485374516229548E-4]:3.650413676086E1,((22[&rate=2.6436129441352894E-4]:2.207819578686E0,21[&rate=5.092814272089465E-4]:2.207819578686E0)[&rate=9.865136782244697E-4]:2.709723370296E0,20[&rate=8.910720551966045E-4]:4.917542948982E0)[&rate=0.0012973642039727261]:3.158659381188E1)[&rate=0.0011932900349283604]:3.505111554742E1,(((30[&rate=6.323613545900664E-4]:5.219805269997E1,26[&rate=6.589241212294761E-4]:5.219805269997E1)[&rate=0.0011932900349283604]:7.427354975592E0,32[&rate=4.1173052406031773E-4]:5.962540767557E1)[&rate=7.154896369662258E-4]:1.035795321802E1,((((2[&rate=7.783343549930989E-4]:1.001216036479E0,4[&rate=6.455214450171927E-4]:1.001216036479E0)[&rate=3.252651716419258E-4]:7.270654481206E-1,3[&rate=6.194201818369134E-4]:1.728281484599E0)[&rate=0.0018870838986441607]:7.510023883952E0,5[&rate=3.852906410751996E-4]:9.238305368552E0)[&rate=9.12976970243385E-4]:1.449683536867E0,((7[&rate=0.0010142858905819647]:6.411516510021E0,6[&rate=7.783343549930989E-4]:6.411516510021E0)[&rate=0.0011502711817636569]:1.279265361769E0,1[&rate=5.694066029450496E-4]:7.69078187179E0)[&rate=8.129508769081095E-4]:2.997207033629E0)[&rate=4.4924741624434363E-4]:5.929537198816E1)[&rate=5.694066029450496E-4]:1.571891414692E0)[&rate=0.0014413614808857953]:4.637332003713E0,12[&rate=7.61899370243201E-4]:7.619258431199E1)[&rate=3.568994232488353E-4]:2.10475548894E0)[&rate=0.0011115825038663016]:6.516167208858E-1)[&rate=6.589241212294761E-4]:4.4692717474E0,(17[&rate=7.953324371537528E-4]:7.920023136166E1,(27[&rate=5.451605178379577E-4]:2.765793749302E1,28[&rate=0.0010441280878184776]:2.765793749302E1)[&rate=4.973657499945528E-4]:5.154229386863E1)[&rate=0.0010441280878184776]:4.217996907559E0)[&rate=0.0023644128165407345]:2.740774901412E1); +tree STATE_90000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55117.659152101216,EEF_ucld_branchRates=-266.168517335019,lnP=-55117.659152101216,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.33580822165846E-4]:7.302682610234E0,9[&rate=0.0011257362524335504]:7.302682610234E0)[&rate=4.33580822165846E-4]:7.385506716476E0,15[&rate=6.171671034550184E-4]:1.468818932671E1)[&rate=0.0010897703531426212]:8.369325382558E1,(14[&rate=0.0012142243752146823]:3.860491459478E1,24[&rate=9.331648675925535E-4]:3.860491459478E1)[&rate=9.773619512805016E-4]:5.977652855751E1)[&rate=0.00143782478945856]:2.930685218315E1,(((((19[&rate=5.339169275872539E-4]:2.668161617476E1,18[&rate=6.066311698254334E-4]:2.668161617476E1)[&rate=3.7766429794855406E-4]:4.966755751601E1,((33[&rate=6.715327202276851E-4]:6.682706042983E1,13[&rate=3.189325984497443E-4]:6.682706042983E1)[&rate=5.128959691417147E-4]:9.28120800637E0,(11[&rate=5.650380563431234E-4]:2.159014864651E1,29[&rate=5.443225259362119E-4]:2.159014864651E1)[&rate=8.940783780867862E-4]:5.451811978969E1)[&rate=6.493788846577463E-4]:2.409052545684E-1)[&rate=6.603756892689464E-4]:2.117097419381E0,((10[&rate=7.969732155045665E-4]:2.923736037276E1,31[&rate=4.0735047416849793E-4]:2.923736037276E1)[&rate=5.857590139292751E-4]:4.883343072059E1,23[&rate=4.5768851588483316E-4]:7.807079109335E1)[&rate=8.115722314091445E-4]:3.954800167974E-1)[&rate=5.753884663829673E-4]:2.4548450935E0,(25[&rate=7.181709783237821E-4]:7.996386557212E1,(((16[&rate=3.416025874238101E-4]:3.551182210233E1,((22[&rate=9.54527315195231E-4]:2.201656940293E0,21[&rate=6.171671034550184E-4]:2.201656940293E0)[&rate=6.603756892689464E-4]:2.574157245262E0,20[&rate=0.0010019241914578935]:4.775814185555E0)[&rate=0.0015834755411275995]:3.073600791677E1)[&rate=0.0011666548618817078]:4.006780096388E1,(((((3[&rate=8.424586056378154E-4]:1.371374228077E0,4[&rate=0.001342405511842771]:1.371374228077E0)[&rate=8.760519924161573E-4]:3.634541225659E-1,2[&rate=7.691952498962801E-4]:1.734828350643E0)[&rate=7.559275207527407E-4]:8.716345408713E0,5[&rate=5.857590139292751E-4]:1.045117375936E1)[&rate=2.89596639990363E-4]:1.05106401643E0,((7[&rate=5.546892603772489E-4]:7.162657712172E0,6[&rate=4.914128383342643E-4]:7.162657712172E0)[&rate=0.0010019241914578935]:2.100977915501E0,1[&rate=4.0735047416849793E-4]:9.263635627673E0)[&rate=7.828632343894969E-4]:2.238602148113E0)[&rate=5.961674831966385E-4]:6.190885121336E1,((30[&rate=6.715327202276851E-4]:5.32451674374E1,26[&rate=7.181709783237821E-4]:5.32451674374E1)[&rate=0.0010019241914578935]:8.902631204362E0,32[&rate=3.607409901316896E-4]:6.214779864176E1)[&rate=7.559275207527407E-4]:1.126329034739E1)[&rate=5.339169275872539E-4]:2.168534077055E0)[&rate=0.001057632563005913]:4.144571256345E0,12[&rate=9.54527315195231E-4]:7.972419432255E1)[&rate=3.189325984497443E-4]:2.396712495705E-1)[&rate=7.181709783237821E-4]:9.572506315264E-1)[&rate=4.458449411903105E-4]:5.247563619149E0,(17[&rate=8.588774255383282E-4]:8.170993406915E1,(27[&rate=6.385237082230468E-4]:2.498489226788E1,28[&rate=8.115722314091445E-4]:2.498489226788E1)[&rate=5.546892603772489E-4]:5.672504180127E1)[&rate=3.7766429794855406E-4]:4.458745753643E0)[&rate=0.00143782478945856]:4.151961551265E1); +tree STATE_100000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.583916827825,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.583916827825,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.208618705868827E-4]:7.187809098267E0,9[&rate=0.0011184812239877957]:7.187809098267E0)[&rate=0.0010090055875050816]:7.285827205874E0,15[&rate=4.193962609855181E-4]:1.447363630414E1)[&rate=8.525289635861237E-4]:9.114075004458E1,(14[&rate=0.0012306796420496798]:4.378170272962E1,24[&rate=5.775069189829491E-4]:4.378170272962E1)[&rate=8.042612466647114E-4]:6.18326836191E1)[&rate=9.313773675085644E-4]:2.337973453076E1,(((((19[&rate=7.896094743188346E-4]:1.908623216041E1,18[&rate=5.30306766856563E-4]:1.908623216041E1)[&rate=4.824205222269677E-4]:5.512825235201E1,((33[&rate=6.464429385563455E-4]:6.315668350733E1,13[&rate=3.519984061584087E-4]:6.315668350733E1)[&rate=3.1302784691553744E-4]:1.067561961378E1,(11[&rate=3.677106588883793E-4]:1.818577760215E1,29[&rate=3.341872683794918E-4]:1.818577760215E1)[&rate=6.261435792133404E-4]:5.564652551896E1)[&rate=4.824205222269677E-4]:3.821813913005E-1)[&rate=5.30306766856563E-4]:1.704350702883E0,((10[&rate=6.892760821357626E-4]:2.819426378395E1,31[&rate=5.58564190912116E-4]:2.819426378395E1)[&rate=6.063919678960947E-4]:4.546748660691E1,23[&rate=5.39726967375177E-4]:7.366175039085E1)[&rate=4.193962609855181E-4]:2.257084824445E0)[&rate=9.096154316532493E-4]:1.991265593559E0,(25[&rate=7.363119127905988E-4]:7.593058700835E1,(((((30[&rate=7.489476830301054E-4]:5.446409938108E1,26[&rate=6.261435792133404E-4]:5.446409938108E1)[&rate=6.162077086407009E-4]:7.241296259736E0,32[&rate=5.39726967375177E-4]:6.170539564081E1)[&rate=6.892760821357626E-4]:7.382948750283E0,((((3[&rate=8.525289635861237E-4]:1.490381041492E0,4[&rate=8.893608555433277E-4]:1.490381041492E0)[&rate=4.306886562845776E-4]:1.974134478438E-1,2[&rate=4.4157983882193855E-4]:1.687794489336E0)[&rate=3.951927094606625E-4]:9.177046190219E0,5[&rate=7.620102249605487E-4]:1.086484067955E1)[&rate=6.78236997851043E-4]:7.653984021203E-1,((7[&rate=6.063919678960947E-4]:6.602659039006E0,6[&rate=9.806417130672391E-4]:6.602659039006E0)[&rate=3.951927094606625E-4]:1.13188302486E0,1[&rate=2.855395966740293E-4]:7.734542063866E0)[&rate=5.870570984311687E-4]:3.895697017809E0)[&rate=5.208618705868827E-4]:5.745810530942E1)[&rate=5.775069189829491E-4]:3.846185014387E0,(16[&rate=3.519984061584087E-4]:3.61020434297E1,((22[&rate=0.0013138686282367907]:2.486605610432E0,21[&rate=3.677106588883793E-4]:2.486605610432E0)[&rate=0.0010407010503511625]:2.364665029962E0,20[&rate=0.0010767028418223344]:4.851270640394E0)[&rate=7.620102249605487E-4]:3.12507727893E1)[&rate=9.096154316532493E-4]:3.683248597578E1)[&rate=8.356293098777016E-4]:2.028844172799E0,12[&rate=8.525289635861237E-4]:7.496337357828E1)[&rate=7.005748996578308E-4]:9.672134300691E-1)[&rate=5.58564190912116E-4]:1.979513800508E0)[&rate=5.11372976793809E-4]:5.263735206982E0,(17[&rate=9.313773675085644E-4]:7.675792577375E1,(27[&rate=6.162077086407009E-4]:2.559277245057E1,28[&rate=0.0012306796420496798]:2.559277245057E1)[&rate=7.121602431207865E-4]:5.116515332319E1)[&rate=7.363119127905988E-4]:6.415910242086E0)[&rate=0.0014403517852423996]:4.582028486364E1); +tree STATE_110000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55111.51881461051,EEF_ucld_branchRates=-266.168517335019,lnP=-55111.51881461051,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.2569631578625314E-4]:8.531303108964E0,9[&rate=6.193614534660965E-4]:8.531303108964E0)[&rate=7.714015932701841E-4]:4.800291069417E0,15[&rate=4.7024937498119665E-4]:1.333159417838E1)[&rate=6.536614826565535E-4]:9.420896562883E1,(14[&rate=9.359535121913269E-4]:4.47732445897E1,24[&rate=0.001044723640170405]:4.47732445897E1)[&rate=8.924515524635973E-4]:6.276731521752E1)[&rate=5.864908097408716E-4]:1.528103434488E1,(((((19[&rate=6.082708566218781E-4]:1.54621357224E1,18[&rate=3.75718285208186E-4]:1.54621357224E1)[&rate=5.230915518999972E-4]:5.25107909756E1,((33[&rate=5.757657952926047E-4]:6.204197464271E1,13[&rate=3.29835839603801E-4]:6.204197464271E1)[&rate=9.359535121913269E-4]:5.589327534666E0,(11[&rate=5.545587701715301E-4]:1.541728128214E1,29[&rate=5.335590133554677E-4]:1.541728128214E1)[&rate=7.567724239888876E-4]:5.221402089524E1)[&rate=3.464486391724557E-4]:3.416245206238E-1)[&rate=3.616117142426158E-4]:4.085796916014E0,((10[&rate=5.335590133554677E-4]:2.40981323579E1,31[&rate=5.230915518999972E-4]:2.40981323579E1)[&rate=3.1111609988749417E-4]:4.75807039228E1,23[&rate=6.306103403334994E-4]:7.16788362807E1)[&rate=2.606400660391243E-4]:3.798873333134E-1)[&rate=3.29835839603801E-4]:1.049161049613E0,(25[&rate=8.18685926810497E-4]:7.108002460182E1,(((((30[&rate=7.155692429902346E-4]:4.993120357997E1,26[&rate=7.567724239888876E-4]:4.993120357997E1)[&rate=0.0012723747220772577]:7.228440848188E0,32[&rate=3.29835839603801E-4]:5.715964442816E1)[&rate=4.0170890043088526E-4]:8.507634259863E0,((((3[&rate=7.02596272796497E-4]:1.736825823356E0,4[&rate=5.12620006040666E-4]:1.736825823356E0)[&rate=4.0170890043088526E-4]:1.107275816464E-1,2[&rate=8.725695114882345E-4]:1.847553405003E0)[&rate=9.599730494010644E-4]:7.643988006161E0,5[&rate=7.288984308866874E-4]:9.491541411164E0)[&rate=0.0010139516836424796]:1.031762555891E0,((7[&rate=4.139001803709051E-4]:7.406857262016E0,6[&rate=6.082708566218781E-4]:7.406857262016E0)[&rate=7.02596272796497E-4]:4.208869430926E-1,1[&rate=5.12620006040666E-4]:7.827744205109E0)[&rate=8.537264830669652E-4]:2.695559761946E0)[&rate=4.7024937498119665E-4]:5.514397472097E1)[&rate=7.714015932701841E-4]:1.951329798213E0,(16[&rate=2.8903970056852994E-4]:3.074903787045E1,((22[&rate=0.0016101698834131224]:2.363993758637E0,21[&rate=0.0010139516836424796]:2.363993758637E0)[&rate=8.18685926810497E-4]:1.972076701421E0,20[&rate=8.537264830669652E-4]:4.336070460058E0)[&rate=0.001044723640170405]:2.641296741039E1)[&rate=0.0011169932400667242]:3.686957061579E1)[&rate=0.0011605674490551298]:2.586523745863E0,12[&rate=6.193614534660965E-4]:7.02051322321E1)[&rate=0.0011169932400667242]:8.74892369718E-1)[&rate=6.306103403334994E-4]:2.027860061812E0)[&rate=4.7024937498119665E-4]:2.770894453767E0,(17[&rate=5.973199702250081E-4]:7.017736739668E1,(27[&rate=5.545587701715301E-4]:2.656552702748E1,28[&rate=0.0013489330346413049]:2.656552702748E1)[&rate=6.65505713916869E-4]:4.36118403692E1)[&rate=7.567724239888876E-4]:5.701411720721E0)[&rate=0.0014519624256512898]:4.694281503469E1); +tree STATE_120000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55123.96640602601,EEF_ucld_branchRates=-266.168517335019,lnP=-55123.96640602601,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=0.001154028279339214]:6.881974092744E0,9[&rate=0.0014070397486576252]:6.881974092744E0)[&rate=8.938856601943283E-4]:9.028621354814E0,15[&rate=5.408960858917783E-4]:1.591059544756E1)[&rate=8.792718135781054E-4]:8.850268032165E1,(14[&rate=0.00125579139366644]:4.251574545218E1,24[&rate=0.0012984612495937594]:4.251574545218E1)[&rate=0.0010323236496681345]:6.189753031703E1)[&rate=0.0011845502146668734]:1.512938465516E1,(((((19[&rate=8.512413294940105E-4]:1.328747351054E1,18[&rate=6.475014280345919E-4]:1.328747351054E1)[&rate=3.857461073898542E-4]:5.635318569396E1,((11[&rate=4.3288032845708723E-4]:1.492178530521E1,29[&rate=9.089549406405198E-4]:1.492178530521E1)[&rate=9.089549406405198E-4]:5.314568471959E1,(33[&rate=0.00101221440243677]:6.31668967817E1,13[&rate=4.690781713675698E-4]:6.31668967817E1)[&rate=6.813844943196404E-4]:4.9005732431E0)[&rate=6.588004823746652E-4]:1.573189179703E0)[&rate=7.5041260167986E-4]:2.922796814718E0,((10[&rate=7.38666537370468E-4]:2.606409973842E1,31[&rate=6.475014280345919E-4]:2.606409973842E1)[&rate=4.1135004049859834E-4]:4.548678889575E1,23[&rate=4.999817555838189E-4]:7.155088863417E1)[&rate=7.743457984232568E-4]:1.012567385052E0)[&rate=4.5185760976440987E-4]:2.033294327604E0,(25[&rate=6.475014280345919E-4]:7.406745959262E1,(((((30[&rate=8.24566699229824E-4]:5.237162588967E1,26[&rate=7.865734272611986E-4]:5.237162588967E1)[&rate=0.00125579139366644]:6.552030909321E0,32[&rate=4.5185760976440987E-4]:5.892365679899E1)[&rate=5.78109989517332E-4]:1.009967695483E1,((((3[&rate=9.931023338125501E-4]:1.910482407461E0,4[&rate=8.37750825056855E-4]:1.910482407461E0)[&rate=6.588004823746652E-4]:3.069282034589E-1,2[&rate=8.938856601943283E-4]:2.21741061092E0)[&rate=4.999817555838189E-4]:7.508563022327E0,5[&rate=4.3288032845708723E-4]:9.725973633247E0)[&rate=0.00101221440243677]:1.402931358405E0,((7[&rate=5.277858779161321E-4]:7.426746783052E0,6[&rate=0.001126057008800308]:7.426746783052E0)[&rate=5.141865840802532E-4]:5.452125877734E-1,1[&rate=8.938856601943283E-4]:7.971959370825E0)[&rate=0.0010323236496681345]:3.156945620826E0)[&rate=6.475014280345919E-4]:5.789442876217E1)[&rate=6.017300554949747E-4]:6.495744836962E-1,(16[&rate=6.813844943196404E-4]:3.306426420257E1,((22[&rate=0.0011002012581250774]:2.276478088381E0,21[&rate=7.622990871400344E-4]:2.276478088381E0)[&rate=7.990037490877938E-4]:4.433248437201E0,20[&rate=0.001578965586127157]:6.709726525582E0)[&rate=0.0012182041079476585]:2.635453767699E1)[&rate=0.0010535708422191687]:3.660864403494E1)[&rate=0.001728188132682674]:1.791968331547E0,12[&rate=7.5041260167986E-4]:7.146487656906E1)[&rate=7.155195682441027E-4]:2.602583023553E0)[&rate=7.622990871400344E-4]:5.292907542083E-1)[&rate=7.04081562570523E-4]:4.995431759705E0,(17[&rate=9.574179370183233E-4]:7.367126000673E1,(27[&rate=5.900085973491877E-4]:2.608616248564E1,28[&rate=9.931023338125501E-4]:2.608616248564E1)[&rate=7.270417531486815E-4]:4.758509752109E1)[&rate=3.524383815815313E-4]:5.920922099802E0)[&rate=0.0014070397486576252]:3.995047831783E1); +tree STATE_130000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.08330990378,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.08330990378,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.6981867862945943E-4]:1.061966333407E1,9[&rate=6.846917457722275E-4]:1.061966333407E1)[&rate=0.0010377384514722113]:6.503950714856E0,15[&rate=9.90619290791368E-4]:1.712361404892E1)[&rate=9.303840717680246E-4]:8.690804440477E1,(14[&rate=0.0011604036680096443]:4.514611096727E1,24[&rate=0.0012008182590476665]:4.514611096727E1)[&rate=0.0013038029447749013]:5.888554748643E1)[&rate=6.520909903471902E-4]:2.565612376641E1,(((((19[&rate=7.791005634698475E-4]:1.608897138078E1,18[&rate=7.301524995217394E-4]:1.608897138078E1)[&rate=4.071754048642794E-4]:5.897665897118E1,((11[&rate=6.958059560788786E-4]:1.42142597815E1,29[&rate=5.351630096906742E-4]:1.42142597815E1)[&rate=4.3781700456403964E-4]:5.884037639977E1,(33[&rate=6.958059560788786E-4]:6.503557267879E1,13[&rate=4.230818895242498E-4]:6.503557267879E1)[&rate=5.241079371615782E-4]:8.019063502483E0)[&rate=7.791005634698475E-4]:2.010994170689E0)[&rate=7.185163383227367E-4]:2.345138331591E0,((10[&rate=4.895688863531634E-4]:2.250575304674E1,31[&rate=8.19114497371842E-4]:2.250575304674E1)[&rate=3.6981867862945943E-4]:5.353547959543E1,23[&rate=4.7741471947981167E-4]:7.604123264217E1)[&rate=9.493265581019099E-4]:1.369536041381E0)[&rate=3.4625241415304987E-4]:1.0801703092E0,(25[&rate=5.991822655647798E-4]:7.706703109423E1,(((((((3[&rate=3.4625241415304987E-4]:1.611049558567E0,4[&rate=8.478963534313421E-4]:1.611049558567E0)[&rate=0.0019197730767652286]:1.169133724437E-1,2[&rate=3.1565338514862257E-4]:1.727962931011E0)[&rate=6.202361936495881E-4]:8.548824973617E0,5[&rate=6.097028960906808E-4]:1.027678790463E1)[&rate=8.788144330096818E-4]:1.618675667627E0,((7[&rate=4.7741471947981167E-4]:8.441112013881E0,6[&rate=6.097028960906808E-4]:8.441112013881E0)[&rate=9.303840717680246E-4]:7.311972238745E-1,1[&rate=5.886553500640413E-4]:9.172309237756E0)[&rate=8.053966642731579E-4]:2.723154334499E0)[&rate=5.675009465966788E-4]:6.096332499108E1,((30[&rate=6.414128093341293E-4]:5.585878961333E1,26[&rate=4.7741471947981167E-4]:5.585878961333E1)[&rate=0.0011248309332377185]:8.169749812375E0,32[&rate=5.991822655647798E-4]:6.40285394257E1)[&rate=9.693508187731965E-4]:8.830249137631E0)[&rate=0.0016095010600754324]:9.683283435423E-1,(16[&rate=7.07074329303432E-4]:3.820134879592E1,((22[&rate=8.332656139090173E-4]:2.823201311288E0,21[&rate=9.303840717680246E-4]:2.823201311288E0)[&rate=6.414128093341293E-4]:3.275011671131E0,20[&rate=0.0012008182590476665]:6.098212982419E0)[&rate=0.0011248309332377185]:3.21031358135E1)[&rate=8.332656139090173E-4]:3.562576811095E1)[&rate=0.0010377384514722113]:2.0751702005E0,12[&rate=7.540961731913215E-4]:7.590228710738E1)[&rate=9.693508187731965E-4]:1.164743986852E0)[&rate=8.053966642731579E-4]:1.42390789852E0)[&rate=5.460588518542255E-4]:2.406506885679E0,(17[&rate=8.952310318773309E-4]:7.362154965232E1,(27[&rate=5.886553500640413E-4]:3.206400909076E1,28[&rate=7.07074329303432E-4]:3.206400909076E1)[&rate=6.737130833897111E-4]:4.155754056156E1)[&rate=4.895688863531634E-4]:7.275896226104E0)[&rate=0.0012477287477185646]:4.879033634168E1); +tree STATE_140000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55118.20399604438,EEF_ucld_branchRates=-266.168517335019,lnP=-55118.20399604438,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.550676009090287E-4]:9.941058321033E0,9[&rate=4.550676009090287E-4]:9.941058321033E0)[&rate=3.60346179245397E-4]:5.531711235864E0,15[&rate=7.518924749822438E-4]:1.54727695569E1)[&rate=9.599935659988625E-4]:9.10949924026E1,(14[&rate=9.091768519689211E-4]:3.974590983573E1,24[&rate=8.033359719668815E-4]:3.974590983573E1)[&rate=9.910940960290032E-4]:6.682185212376E1)[&rate=7.404032616229928E-4]:1.931357598219E1,(((((19[&rate=8.681867766571084E-4]:1.349921951635E1,18[&rate=7.895052448192487E-4]:1.349921951635E1)[&rate=3.60346179245397E-4]:5.748486862915E1,((11[&rate=5.225612398910059E-4]:1.713178392558E1,29[&rate=6.983114813870708E-4]:1.713178392558E1)[&rate=7.895052448192487E-4]:5.333509443358E1,(33[&rate=7.895052448192487E-4]:5.797821411063E1,13[&rate=5.383666660107974E-4]:5.797821411063E1)[&rate=8.502166395502219E-4]:1.248866424852E1)[&rate=2.727736131135363E-4]:5.172097863495E-1)[&rate=6.096744313777837E-4]:2.709389773062E0,((10[&rate=8.179736159415192E-4]:2.065817202753E1,31[&rate=3.76362758048113E-4]:2.065817202753E1)[&rate=4.550676009090287E-4]:5.200874268765E1,23[&rate=3.903827577656497E-4]:7.266691471519E1)[&rate=6.346109111689322E-4]:1.026563203378E0)[&rate=6.261852979315741E-4]:7.681706781219E-1,(25[&rate=6.698116498372119E-4]:7.175595717201E1,(((((((3[&rate=4.550676009090287E-4]:1.485475975544E0,4[&rate=6.096744313777837E-4]:1.485475975544E0)[&rate=4.900614010507747E-4]:3.317395447924E-1,2[&rate=7.083341148296074E-4]:1.817215520337E0)[&rate=6.983114813870708E-4]:8.043814786787E0,5[&rate=6.518778297756023E-4]:9.861030307124E0)[&rate=7.083341148296074E-4]:1.56589552327E0,((7[&rate=5.697535564440584E-4]:7.431722123165E0,6[&rate=5.935253950057507E-4]:7.431722123165E0)[&rate=6.698116498372119E-4]:1.321928331372E0,1[&rate=3.60346179245397E-4]:8.753650454537E0)[&rate=5.225612398910059E-4]:2.673275375856E0)[&rate=4.2555642015650627E-4]:5.695237015993E1,((30[&rate=5.618996129201723E-4]:4.834371594083E1,26[&rate=8.179736159415192E-4]:4.834371594083E1)[&rate=5.697535564440584E-4]:1.199862707395E1,32[&rate=4.030298328202695E-4]:6.034234301478E1)[&rate=4.983484656092575E-4]:8.03695297554E0)[&rate=4.550676009090287E-4]:1.539624993663E0,(16[&rate=5.145762981897017E-4]:3.456494623149E1,((22[&rate=6.885679176789586E-4]:3.31257556287E0,21[&rate=5.697535564440584E-4]:3.31257556287E0)[&rate=7.18666423536141E-4]:3.075711840989E0,20[&rate=5.383666660107974E-4]:6.388287403858E0)[&rate=9.091768519689211E-4]:2.817665882763E1)[&rate=0.0012249204198859116]:3.53539747525E1)[&rate=7.763765178649494E-4]:9.64331776105E-1,12[&rate=9.910940960290032E-4]:7.088325276009E1)[&rate=6.015613164120359E-4]:8.727044119203E-1)[&rate=6.178778832577042E-4]:2.705691424681E0)[&rate=5.462196981803251E-4]:5.792716983733E0,(17[&rate=9.091768519689211E-4]:7.306897574792E1,(27[&rate=4.983484656092575E-4]:2.714489462683E1,28[&rate=9.599935659988625E-4]:2.714489462683E1)[&rate=5.776340953566392E-4]:4.592408112109E1)[&rate=6.096744313777837E-4]:7.185389832496E0)[&rate=0.0012249204198859116]:4.562697236126E1); +tree STATE_150000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55135.25474421151,EEF_ucld_branchRates=-266.168517335019,lnP=-55135.25474421151,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.976126437311172E-4]:8.508098814262E0,9[&rate=0.0011169361308539915]:8.508098814262E0)[&rate=5.952408781430578E-4]:7.623915652328E0,15[&rate=8.946603677431877E-4]:1.613201446659E1)[&rate=7.454477373680971E-4]:9.796448086946E1,(14[&rate=0.0012353719858917188]:4.871031295476E1,24[&rate=8.787104240997261E-4]:4.871031295476E1)[&rate=0.0011169361308539915]:6.538618238128E1)[&rate=7.693088170676306E-4]:1.177195470676E1,(((((19[&rate=8.344120671957305E-4]:1.520965847346E1,18[&rate=9.471609339631677E-4]:1.520965847346E1)[&rate=3.553782772504842E-4]:6.025118619346E1,((11[&rate=5.952408781430578E-4]:2.278854472493E1,29[&rate=5.639367636636011E-4]:2.278854472493E1)[&rate=7.002966453025849E-4]:5.013327911695E1,(33[&rate=8.072749137576853E-4]:5.77941468467E1,13[&rate=4.6012313097334876E-4]:5.77941468467E1)[&rate=8.072749137576853E-4]:1.512767699518E1)[&rate=4.976126437311172E-4]:2.539020825027E0)[&rate=0.0011902051143932951]:8.020956577205E-1,((10[&rate=4.976126437311172E-4]:2.075316992094E1,31[&rate=9.287867526800754E-4]:2.075316992094E1)[&rate=6.470284654054311E-4]:5.520875683917E1,23[&rate=6.574954755333602E-4]:7.596192676011E1)[&rate=3.7886507347330864E-4]:3.010135645235E-1)[&rate=7.11317048019165E-4]:7.841976889222E-1,(25[&rate=6.574954755333602E-4]:7.598819896385E1,(((((30[&rate=9.871794537992242E-4]:5.5846333256E1,26[&rate=4.976126437311172E-4]:5.5846333256E1)[&rate=0.0012353719858917188]:7.172328816406E0,32[&rate=3.7886507347330864E-4]:6.30186620724E1)[&rate=6.05584317162086E-4]:6.866583719954E0,((((3[&rate=6.159164875850757E-4]:1.658139407558E0,4[&rate=5.425985502541658E-4]:1.658139407558E0)[&rate=9.287867526800754E-4]:5.43327314608E-1,2[&rate=6.680388138338686E-4]:2.201466722166E0)[&rate=9.665732565084096E-4]:7.973784303523E0,5[&rate=5.84866339957599E-4]:1.017525102569E1)[&rate=0.0010583338074744357]:1.993352350368E0,((7[&rate=4.317979677711018E-4]:8.796641894972E0,6[&rate=8.072749137576853E-4]:8.796641894972E0)[&rate=5.639367636636011E-4]:9.061414758897E-1,1[&rate=7.11317048019165E-4]:9.702783370862E0)[&rate=4.160108497642771E-4]:2.465820005195E0)[&rate=4.976126437311172E-4]:5.77166424163E1)[&rate=2.736688548948708E-4]:2.251330369015E0,(16[&rate=5.639367636636011E-4]:3.731451451501E1,((22[&rate=6.574954755333602E-4]:2.511694377931E0,21[&rate=7.11317048019165E-4]:2.511694377931E0)[&rate=9.871794537992242E-4]:4.295085431624E0,20[&rate=7.816451500428929E-4]:6.806779809555E0)[&rate=0.0010327875629773896]:3.050773470546E1)[&rate=8.486483798559837E-4]:3.482206164636E1)[&rate=0.001582218513945725]:1.795427218361E0,12[&rate=9.471609339631677E-4]:7.393200337973E1)[&rate=6.894221068270843E-4]:2.056195584118E0)[&rate=0.0011902051143932951]:1.058939049706E0)[&rate=7.816451500428929E-4]:3.654220523736E0,(17[&rate=6.786753297510117E-4]:6.949951038378E1,(27[&rate=3.7886507347330864E-4]:4.061855879449E1,28[&rate=6.159164875850757E-4]:4.061855879449E1)[&rate=0.0011169361308539915]:2.888095158929E1)[&rate=8.344120671957305E-4]:1.120184815351E1)[&rate=0.001582218513945725]:4.516709150551E1); +tree STATE_160000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55137.459882877614,EEF_ucld_branchRates=-266.168517335019,lnP=-55137.459882877614,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.884055173862778E-4]:7.921746734357E0,9[&rate=0.0010480805395310518]:7.921746734357E0)[&rate=0.0014882381043151705]:4.674762503444E0,15[&rate=3.3851966313607417E-4]:1.25965092378E1)[&rate=8.263717677149479E-4]:9.514696915162E1,(14[&rate=0.001227041546151285]:4.464706784261E1,24[&rate=0.0010152281166156039]:4.464706784261E1)[&rate=0.0011254816920789697]:6.309641054681E1)[&rate=8.651527314576056E-4]:9.23518323056E0,(((((19[&rate=4.478273229468292E-4]:1.428584853306E1,18[&rate=8.452654358979224E-4]:1.428584853306E1)[&rate=2.6665746273748684E-4]:5.505215216631E1,((11[&rate=4.027752668019927E-4]:2.47494548143E1,29[&rate=3.3851966313607417E-4]:2.47494548143E1)[&rate=7.286036960704763E-4]:4.361589378101E1,(33[&rate=9.084684615417787E-4]:6.129984649464E1,13[&rate=5.230504194977317E-4]:6.129984649464E1)[&rate=6.005209713685134E-4]:7.065502100671E0)[&rate=8.861670034658632E-4]:9.726521040616E-1)[&rate=8.861670034658632E-4]:2.444273185563E0,((10[&rate=3.908971691691143E-4]:2.004304453288E1,31[&rate=8.263717677149479E-4]:2.004304453288E1)[&rate=3.234200162909581E-4]:5.072195038575E1,23[&rate=4.143528350004341E-4]:7.076499491863E1)[&rate=7.434042414549303E-4]:1.017278966296E0)[&rate=5.556002401288861E-4]:1.44803738178E0,(25[&rate=7.746109175203108E-4]:7.239207633244E1,(((((30[&rate=6.239682451184576E-4]:5.1759438627E1,26[&rate=6.239682451184576E-4]:5.1759438627E1)[&rate=0.0011723094403718875]:6.970193113285E0,32[&rate=5.016219945738909E-4]:5.872963174029E1)[&rate=4.909323177913883E-4]:8.334924873575E0,((((3[&rate=9.084684615417787E-4]:1.473605446168E0,4[&rate=7.434042414549303E-4]:1.473605446168E0)[&rate=4.027752668019927E-4]:3.358127902428E-1,2[&rate=8.651527314576056E-4]:1.80941823641E0)[&rate=7.003668902342628E-4]:7.789210588994E0,5[&rate=9.577581310515596E-4]:9.598628825405E0)[&rate=5.230504194977317E-4]:1.645384480107E0,((7[&rate=2.6665746273748684E-4]:6.692572704524E0,6[&rate=4.027752668019927E-4]:6.692572704524E0)[&rate=6.239682451184576E-4]:6.743614356224E-1,1[&rate=4.6949724902019556E-4]:7.366934140147E0)[&rate=5.123214608391127E-4]:3.877079165365E0)[&rate=5.44671676778791E-4]:5.582054330835E1)[&rate=5.890731162549076E-4]:9.637342164376E-1,(16[&rate=5.666312933685234E-4]:3.743470492013E1,((22[&rate=7.286036960704763E-4]:3.005815893744E0,21[&rate=2.884055173862778E-4]:3.005815893744E0)[&rate=0.0011254816920789697]:2.783998477258E0,20[&rate=6.608425280162308E-4]:5.789814371002E0)[&rate=6.005209713685134E-4]:3.164489054912E1)[&rate=0.0011254816920789697]:3.059358591017E1)[&rate=5.123214608391127E-4]:3.121837238872E0,12[&rate=6.868494217724936E-4]:7.115012806917E1)[&rate=1.9361905636808153E-4]:1.24194826327E0)[&rate=5.777828214833678E-4]:8.38234934267E-1)[&rate=5.666312933685234E-4]:1.804722283484E0,(17[&rate=7.587218785275288E-4]:6.786021981852E1,(27[&rate=4.8023155237174314E-4]:3.163881365154E1,28[&rate=0.0010845204084174874]:3.163881365154E1)[&rate=7.003668902342628E-4]:3.622140616698E1)[&rate=4.6949724902019556E-4]:7.174813731673E0)[&rate=0.0020496422422981715]:4.194362806978E1); +tree STATE_170000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55145.55524628809,EEF_ucld_branchRates=-266.168517335019,lnP=-55145.55524628809,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.970173960084409E-4]:6.047352946572E0,9[&rate=3.9855736986467845E-4]:6.047352946572E0)[&rate=5.198589896045992E-4]:7.895534039795E0,15[&rate=9.53264312992607E-4]:1.394288698637E1)[&rate=7.654479405815171E-4]:1.052106035376E2,(14[&rate=7.503645185576872E-4]:5.590028368932E1,24[&rate=5.859398809971109E-4]:5.590028368932E1)[&rate=0.0010627259818013247]:6.325320683469E1)[&rate=5.016471818820326E-4]:1.024454291563E1,(((((19[&rate=6.268523209104419E-4]:1.739803774417E1,18[&rate=4.925768132512E-4]:1.739803774417E1)[&rate=2.7720732483382484E-4]:5.644224808483E1,((11[&rate=3.28543678002807E-4]:2.545578646195E1,29[&rate=3.9855736986467845E-4]:2.545578646195E1)[&rate=0.001259533466438718]:4.485826172631E1,(33[&rate=6.716280948333958E-4]:6.559701357574E1,13[&rate=2.7720732483382484E-4]:6.559701357574E1)[&rate=7.812811176537629E-4]:4.717034612518E0)[&rate=5.665110017794647E-4]:3.526237640737E0)[&rate=0.0010627259818013247]:1.829613254206E0,((10[&rate=5.859398809971109E-4]:2.379491297172E1,31[&rate=6.836249452507899E-4]:2.379491297172E1)[&rate=3.4201081856826673E-4]:5.083400367718E1,23[&rate=3.9855736986467845E-4]:7.46289166489E1)[&rate=4.4689663538609065E-4]:1.040982434299E0)[&rate=9.250082708926529E-4]:1.874759928295E0,(25[&rate=6.163197213706916E-4]:7.630844095817E1,(((((30[&rate=6.599836212330334E-4]:5.778788676936E1,26[&rate=5.016471818820326E-4]:5.778788676936E1)[&rate=7.654479405815171E-4]:7.667711539047E0,32[&rate=3.9855736986467845E-4]:6.545559830841E1)[&rate=3.8819104634941473E-4]:6.381103622375E0,((((3[&rate=7.359462898423362E-4]:1.651444742682E0,4[&rate=5.569922789199248E-4]:1.651444742682E0)[&rate=7.979643124063607E-4]:4.968024055091E-1,2[&rate=2.0913430216684025E-4]:2.148247148192E0)[&rate=6.836249452507899E-4]:7.566550542497E0,5[&rate=2.970173960084409E-4]:9.714797690689E0)[&rate=8.544529008397495E-4]:1.498271970988E0,((7[&rate=6.716280948333958E-4]:6.024715085439E0,6[&rate=4.6530971832366646E-4]:6.024715085439E0)[&rate=7.088273206885474E-4]:2.17134955227E0,1[&rate=5.475828698103034E-4]:8.196064637709E0)[&rate=7.979643124063607E-4]:3.017005023968E0)[&rate=4.835087221416463E-4]:6.06236322691E1)[&rate=5.382674968619791E-4]:1.917677164084E0,(16[&rate=4.561406259776432E-4]:4.300015511566E1,((22[&rate=8.156177420313357E-4]:2.734078785058E0,21[&rate=3.28543678002807E-4]:2.734078785058E0)[&rate=5.475828698103034E-4]:3.021873774045E0,20[&rate=9.848912167714449E-4]:5.755952559103E0)[&rate=8.994331684195413E-4]:3.724420255656E1)[&rate=7.979643124063607E-4]:3.07542239792E1)[&rate=6.268523209104419E-4]:1.245095406817E0,12[&rate=9.848912167714449E-4]:7.499947450168E1)[&rate=5.016471818820326E-4]:1.308966456487E0)[&rate=4.6530971832366646E-4]:1.236218053328E0)[&rate=8.156177420313357E-4]:3.134127278253E0,(17[&rate=9.848912167714449E-4]:6.984606132356E1,(27[&rate=5.859398809971109E-4]:3.411548518367E1,28[&rate=5.569922789199248E-4]:3.411548518367E1)[&rate=5.665110017794647E-4]:3.573057613989E1)[&rate=4.561406259776432E-4]:1.083272496619E1)[&rate=0.0016695104492787105]:4.871924714988E1); +tree STATE_180000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55125.69429027552,EEF_ucld_branchRates=-266.168517335019,lnP=-55125.69429027552,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.971395497800755E-4]:6.253273704821E0,9[&rate=9.036134466202992E-4]:6.253273704821E0)[&rate=0.0012724696696561962]:7.05257470291E0,15[&rate=5.141771532369299E-4]:1.330584840773E1)[&rate=7.275627676395374E-4]:1.027075954166E2,(14[&rate=0.0011505224234491344]:5.610021887166E1,24[&rate=5.832690798454651E-4]:5.610021887166E1)[&rate=0.0010321684143659604]:5.991322495265E1)[&rate=6.677253020012031E-4]:1.169089561439E1,(((((19[&rate=6.035316022281004E-4]:1.542213588407E1,18[&rate=5.240077705698487E-4]:1.542213588407E1)[&rate=4.0921045875145335E-4]:5.50737415115E1,((11[&rate=6.035316022281004E-4]:2.282007825634E1,29[&rate=4.943860136635411E-4]:2.282007825634E1)[&rate=0.0010321684143659604]:4.685850694322E1,(33[&rate=8.290504446135658E-4]:5.887317432281E1,13[&rate=3.2210665150803053E-4]:5.887317432281E1)[&rate=5.240077705698487E-4]:1.080541087675E1)[&rate=4.943860136635411E-4]:8.172921960093E-1)[&rate=6.035316022281004E-4]:3.90823693713E0,((10[&rate=6.242668201453694E-4]:2.589161933128E1,31[&rate=5.436386149487397E-4]:2.589161933128E1)[&rate=7.027133078048315E-4]:4.776862200113E1,23[&rate=5.933495780666932E-4]:7.366024133241E1)[&rate=8.642203441319821E-4]:7.438730002859E-1)[&rate=8.461759479507364E-4]:1.369636274036E0,(25[&rate=7.275627676395374E-4]:7.430216928081E1,(((((((2[&rate=3.2210665150803053E-4]:1.338603347314E0,4[&rate=5.043104057722143E-4]:1.338603347314E0)[&rate=5.633478823665603E-4]:1.049000409496E0,3[&rate=9.253141985633919E-4]:2.387603756811E0)[&rate=4.320530021328494E-4]:7.689863478429E0,5[&rate=3.56247680257931E-4]:1.007746723524E1)[&rate=0.0012047087818762648]:8.019434523375E-1,((7[&rate=8.461759479507364E-4]:6.539490782393E0,6[&rate=3.006510977870679E-4]:6.539490782393E0)[&rate=3.8436221464865965E-4]:6.212890447632E-1,1[&rate=4.4295326395600267E-4]:7.160779827156E0)[&rate=5.043104057722143E-4]:3.718630860422E0)[&rate=6.791209324007848E-4]:5.799388599582E1,((30[&rate=8.127354497293808E-4]:5.219106200369E1,26[&rate=5.338220817427386E-4]:5.219106200369E1)[&rate=7.275627676395374E-4]:9.678717482243E0,32[&rate=4.640152160880101E-4]:6.186977948594E1)[&rate=5.933495780666932E-4]:7.003517197462E0)[&rate=6.348546849999437E-4]:2.778304386131E0,(16[&rate=3.006510977870679E-4]:4.011127671469E1,((22[&rate=7.678044023589373E-4]:2.554503394097E0,21[&rate=4.320530021328494E-4]:2.554503394097E0)[&rate=6.348546849999437E-4]:3.889921366476E0,20[&rate=8.642203441319821E-4]:6.444424760573E0)[&rate=9.739576079332769E-4]:3.366685195412E1)[&rate=0.0010321684143659604]:3.154032435484E1)[&rate=5.338220817427386E-4]:1.200117233374E0,12[&rate=8.833135859078092E-4]:7.28517183029E1)[&rate=6.348546849999437E-4]:1.450450977908E0)[&rate=8.642203441319821E-4]:1.471581325923E0)[&rate=7.275627676395374E-4]:3.176034639446E0,(17[&rate=9.739576079332769E-4]:6.604773767096E1,(27[&rate=3.56247680257931E-4]:3.144531207456E1,28[&rate=0.0010663663825882174]:3.144531207456E1)[&rate=7.275627676395374E-4]:3.46024255964E1)[&rate=2.269069642404926E-4]:1.290204757522E1)[&rate=0.0018063392007839666]:4.875455419251E1); +tree STATE_190000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55129.14894650696,EEF_ucld_branchRates=-266.168517335019,lnP=-55129.14894650696,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=0.0011515852891599099]:7.787074895818E0,9[&rate=6.63410290693766E-4]:7.787074895818E0)[&rate=9.175740531288086E-4]:8.414895663188E0,15[&rate=3.2070274572794453E-4]:1.620197055901E1)[&rate=7.240223577978837E-4]:9.784096519393E1,(14[&rate=0.0011068504881737256]:4.89840885624E1,24[&rate=8.81602277525443E-4]:4.89840885624E1)[&rate=8.81602277525443E-4]:6.505884719054E1)[&rate=0.0010080949029905404]:1.326857967044E1,(((((19[&rate=7.939835830913188E-4]:2.102620389182E1,18[&rate=6.167310509773814E-4]:2.102620389182E1)[&rate=6.076214274307669E-4]:4.823391977636E1,((11[&rate=5.161139061189842E-4]:1.942771359686E1,29[&rate=5.349085624283386E-4]:1.942771359686E1)[&rate=6.258964523663972E-4]:4.79486869757E1,(33[&rate=8.495969570197026E-4]:6.18481155949E1,13[&rate=5.532931134588233E-4]:6.18481155949E1)[&rate=0.0010080949029905404]:5.528284977653E0)[&rate=4.545498110314001E-4]:1.883723095624E0)[&rate=9.589528415914706E-4]:3.216148908515E0,((10[&rate=5.62388290091955E-4]:2.718262971481E1,31[&rate=3.699062487805442E-4]:2.718262971481E1)[&rate=2.735907877855544E-4]:4.526599014865E1,23[&rate=4.429415011733281E-4]:7.244861986347E1)[&rate=0.0011068504881737256]:2.765271322373E-2)[&rate=3.485928451376872E-4]:1.323420767029E0,(25[&rate=7.240223577978837E-4]:7.336461112081E1,(((((((2[&rate=7.460109320151391E-4]:1.200452696241E0,4[&rate=6.928776160911677E-4]:1.200452696241E0)[&rate=6.444530163564371E-4]:9.180720546878E-1,3[&rate=8.495969570197026E-4]:2.118524750929E0)[&rate=4.763111897783547E-4]:7.262945935231E0,5[&rate=5.255751753421773E-4]:9.38147068616E0)[&rate=6.63410290693766E-4]:1.259082155194E0,((7[&rate=5.349085624283386E-4]:6.755755396992E0,1[&rate=5.62388290091955E-4]:6.755755396992E0)[&rate=4.6564027998995E-4]:1.125916009624E0,6[&rate=8.990172874573935E-4]:7.881671406616E0)[&rate=3.699062487805442E-4]:2.758881434738E0)[&rate=5.804800970550199E-4]:5.522868733865E1,((30[&rate=8.65171552949532E-4]:4.823286090809E1,26[&rate=6.351322043836783E-4]:4.823286090809E1)[&rate=0.0012071357840746384]:7.752001058909E0,32[&rate=3.877498903980923E-4]:5.5984861967E1)[&rate=6.258964523663972E-4]:9.884378213007E0)[&rate=6.351322043836783E-4]:5.150036964326E0,(16[&rate=4.034213061536148E-4]:3.711604455476E1,((22[&rate=6.351322043836783E-4]:3.339605022515E0,21[&rate=8.206103970762829E-4]:3.339605022515E0)[&rate=4.763111897783547E-4]:4.284578731121E0,20[&rate=5.62388290091955E-4]:7.624183753637E0)[&rate=9.374691992090216E-4]:2.949186080113E1)[&rate=8.347727088695304E-4]:3.390323258957E1)[&rate=7.348770953385911E-4]:9.100862327201E-1,12[&rate=8.65171552949532E-4]:7.192936337705E1)[&rate=6.53873892318384E-4]:1.435247743761E0)[&rate=7.460109320151391E-4]:4.350822229047E-1)[&rate=8.495969570197026E-4]:3.12099217708E0,(17[&rate=6.928776160911677E-4]:6.904359863915E1,(27[&rate=5.349085624283386E-4]:3.524033106874E1,28[&rate=5.62388290091955E-4]:3.524033106874E1)[&rate=0.0010080949029905404]:3.380326757041E1)[&rate=7.240223577978837E-4]:7.877086881651E0)[&rate=0.0016320983366070294]:5.039082990257E1); +tree STATE_200000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55149.18880056645,EEF_ucld_branchRates=-266.168517335019,lnP=-55149.18880056645,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.7275038035997954E-4]:6.856053057716E0,9[&rate=7.320150740825299E-4]:6.856053057716E0)[&rate=4.5022144464112703E-4]:8.295163281177E0,15[&rate=6.991683304803039E-4]:1.515121633889E1)[&rate=8.650612259779344E-4]:1.043568902692E2,(14[&rate=0.0011402320080223008]:4.887538333157E1,24[&rate=6.287512285973973E-4]:4.887538333157E1)[&rate=8.991154140994147E-4]:7.063272327653E1)[&rate=5.622917499724436E-4]:8.036687013988E0,(((((19[&rate=8.991154140994147E-4]:1.549486358782E1,18[&rate=9.58688532789412E-4]:1.549486358782E1)[&rate=3.9748083314118036E-4]:5.431569517681E1,((11[&rate=4.7275038035997954E-4]:2.08186150534E1,29[&rate=5.336354828909927E-4]:2.08186150534E1)[&rate=5.811921194230341E-4]:4.685376032599E1,(33[&rate=7.098852295119579E-4]:6.113838764594E1,13[&rate=3.630667555017946E-4]:6.113838764594E1)[&rate=6.384417504144038E-4]:6.533987733447E0)[&rate=6.581253152042919E-4]:2.138183385238E0)[&rate=3.412523998682846E-4]:2.182323432326E0,((10[&rate=5.336354828909927E-4]:2.994963483762E1,31[&rate=5.140733318570403E-4]:2.994963483762E1)[&rate=5.622917499724436E-4]:4.1144296752E1,23[&rate=4.5022144464112703E-4]:7.109393158962E1)[&rate=6.48227828356583E-4]:8.989506073351E-1)[&rate=8.198629336332425E-4]:1.796626178502E0,(25[&rate=8.342678267347649E-4]:7.272096021552E1,(12[&rate=0.0011402320080223008]:6.781524835922E1,((((30[&rate=6.48227828356583E-4]:4.810042734464E1,26[&rate=6.581253152042919E-4]:4.810042734464E1)[&rate=6.000987051427977E-4]:9.70639863462E0,32[&rate=3.630667555017946E-4]:5.780682597926E1)[&rate=5.811921194230341E-4]:6.5854078574E0,((((2[&rate=3.412523998682846E-4]:1.570815801454E0,4[&rate=4.382230088173755E-4]:1.570815801454E0)[&rate=7.320150740825299E-4]:5.943272628567E-1,3[&rate=0.0010342231224828718]:2.165143064311E0)[&rate=8.816259090619043E-4]:7.999436387349E0,5[&rate=7.320150740825299E-4]:1.016457945166E1)[&rate=0.0010342231224828718]:9.194666146185E-1,((7[&rate=8.991154140994147E-4]:7.074020236272E0,1[&rate=6.384417504144038E-4]:7.074020236272E0)[&rate=2.649809625366566E-4]:8.25653200283E-1,6[&rate=8.650612259779344E-4]:7.899673436555E0)[&rate=7.320150740825299E-4]:3.184372629723E0)[&rate=8.493070327100529E-4]:5.330818777038E1)[&rate=8.991154140994147E-4]:2.843374759093E0,(16[&rate=3.630667555017946E-4]:3.615749680325E1,((22[&rate=6.191407589399554E-4]:2.756765262722E0,21[&rate=7.552430369185652E-4]:2.756765262722E0)[&rate=6.783206979978573E-4]:5.013658841653E0,20[&rate=5.336354828909927E-4]:7.770424104375E0)[&rate=9.58688532789412E-4]:2.838707269888E1)[&rate=8.650612259779344E-4]:3.10781117925E1)[&rate=0.0011402320080223008]:5.796397634673E-1)[&rate=9.374550802343306E-4]:4.905711856296E0)[&rate=9.58688532789412E-4]:1.068548159937E0)[&rate=6.581253152042919E-4]:4.606342062564E0,(17[&rate=7.43477806634759E-4]:7.165587613499E1,(27[&rate=5.622917499724436E-4]:3.155576386607E1,28[&rate=0.00118839238535153]:3.155576386607E1)[&rate=5.239170996371831E-4]:4.010011226892E1)[&rate=5.528001693093845E-4]:6.739974303033E0)[&rate=0.001710388415017734]:4.914894318406E1); +tree STATE_210000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55131.00297514561,EEF_ucld_branchRates=-266.168517335019,lnP=-55131.00297514561,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.253315122472508E-4]:9.447829778114E0,9[&rate=5.360128873217232E-4]:9.447829778114E0)[&rate=7.378788998640604E-4]:7.904737727204E0,15[&rate=5.812818227671468E-4]:1.735256750532E1)[&rate=8.440238147060673E-4]:1.024249065072E2,(14[&rate=0.0011016511661915188]:4.776288990055E1,24[&rate=8.581696771598779E-4]:4.776288990055E1)[&rate=9.417463969622246E-4]:7.201458411192E1)[&rate=7.276719426185755E-4]:5.942538493057E0,(((((19[&rate=8.050281348267193E-4]:2.054817899594E1,18[&rate=8.581696771598779E-4]:2.054817899594E1)[&rate=4.75430353769822E-4]:5.251302640409E1,((11[&rate=4.6395752945200505E-4]:2.077484124187E1,29[&rate=7.078713575256338E-4]:2.077484124187E1)[&rate=6.610639300714554E-4]:5.069205472068E1,(33[&rate=0.001008601416909044]:6.165183465475E1,13[&rate=3.9136927409057004E-4]:6.165183465475E1)[&rate=5.724012184516518E-4]:9.815061307807E0)[&rate=4.968940928262263E-4]:1.594309437482E0)[&rate=9.84262401170682E-4]:3.416742542632E0,((10[&rate=7.483202308312411E-4]:2.90063111711E1,31[&rate=5.544253769117588E-4]:2.90063111711E1)[&rate=3.9136927409057004E-4]:4.643073539413E1,23[&rate=6.520323040696031E-4]:7.543704656523E1)[&rate=8.581696771598779E-4]:1.040901377439E0)[&rate=4.863761248482734E-4]:2.482686579517E0,(25[&rate=9.052304509158072E-4]:7.681854018669E1,(12[&rate=7.378788998640604E-4]:7.469939813536E1,((16[&rate=3.4202198513406056E-4]:3.82946815673E1,((22[&rate=0.0011436465822266231]:2.751891075102E0,21[&rate=5.812818227671468E-4]:2.751891075102E0)[&rate=8.886637913627453E-4]:5.701290477978E0,20[&rate=6.341802451284649E-4]:8.453181553079E0)[&rate=9.417463969622246E-4]:2.984150001422E1)[&rate=0.0011016511661915188]:3.375778789282E1,(((((2[&rate=5.452863624121417E-4]:1.954362268105E0,4[&rate=6.701851176869768E-4]:1.954362268105E0)[&rate=7.378788998640604E-4]:7.218146572144E-1,3[&rate=3.4202198513406056E-4]:2.676176925319E0)[&rate=8.581696771598779E-4]:7.512660330081E0,5[&rate=8.440238147060673E-4]:1.01888372554E1)[&rate=6.610639300714554E-4]:2.383065723507E0,((7[&rate=7.276719426185755E-4]:8.047409514781E0,6[&rate=7.483202308312411E-4]:8.047409514781E0)[&rate=3.9136927409057004E-4]:1.098683193165E0,1[&rate=6.701851176869768E-4]:9.146092707946E0)[&rate=5.544253769117588E-4]:3.425810270961E0)[&rate=5.812818227671468E-4]:5.758406410722E1,((30[&rate=5.989231445345781E-4]:4.993950000136E1,26[&rate=6.077175852572532E-4]:4.993950000136E1)[&rate=6.520323040696031E-4]:1.19357456938E1,32[&rate=3.9136927409057004E-4]:6.187524569515E1)[&rate=6.701851176869768E-4]:8.280721390973E0)[&rate=8.730167364614912E-4]:1.896502373997E0)[&rate=6.794106933901177E-4]:2.646928675238E0)[&rate=4.6395752945200505E-4]:2.119142051327E0)[&rate=8.886637913627453E-4]:2.142094335499E0)[&rate=3.9136927409057004E-4]:3.741364607414E0,(17[&rate=8.886637913627453E-4]:7.565486977397E1,(27[&rate=5.452863624121417E-4]:3.300967514365E1,28[&rate=0.0011436465822266231]:3.300967514365E1)[&rate=6.430758068078994E-4]:4.264519463032E1)[&rate=9.621118259801296E-4]:7.047129355631E0)[&rate=0.0015896361235236663]:4.301801337592E1); +tree STATE_220000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55134.321723076086,EEF_ucld_branchRates=-266.168517335019,lnP=-55134.321723076086,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.868066732579518E-4]:1.025060448302E1,9[&rate=3.7099368123750067E-4]:1.025060448302E1)[&rate=2.838426851924642E-4]:7.599511438094E0,15[&rate=4.765390606058314E-4]:1.785011592111E1)[&rate=8.33695512946248E-4]:9.899398465325E1,(14[&rate=0.0011903955275399374]:4.735628124582E1,24[&rate=0.0012665630298399392]:4.735628124582E1)[&rate=7.868066732579518E-4]:6.948781932854E1)[&rate=7.076915004266004E-4]:6.417466512051E0,(((((19[&rate=2.3046646495839007E-4]:2.096639551267E1,18[&rate=7.654225547747428E-4]:2.096639551267E1)[&rate=3.069394572511193E-4]:5.245011193559E1,((11[&rate=1.7121613648385853E-4]:2.085667552775E1,29[&rate=8.875553308308187E-4]:2.085667552775E1)[&rate=5.341944467133915E-4]:5.107993624553E1,(33[&rate=7.868066732579518E-4]:5.662793420755E1,13[&rate=4.1246829156241064E-4]:5.662793420755E1)[&rate=4.020741836847945E-4]:1.530867756573E1)[&rate=4.989828567459821E-4]:1.479895674988E0)[&rate=4.020741836847945E-4]:2.483397232442E0,((10[&rate=4.876714259147339E-4]:3.120948170168E1,31[&rate=6.125422410559622E-4]:3.120948170168E1)[&rate=3.8135837820993217E-4]:4.317197335437E1,23[&rate=6.269784317587147E-4]:7.438145505605E1)[&rate=1.335157190543648E-4]:1.518449624656E0)[&rate=3.069394572511193E-4]:1.015061498972E0,(25[&rate=6.125422410559622E-4]:7.551129638352E1,(12[&rate=7.654225547747428E-4]:7.417226719989E1,((16[&rate=2.3046646495839007E-4]:3.89901002543E1,((22[&rate=9.178637626920087E-4]:2.601136591827E0,21[&rate=4.440287602945656E-4]:2.601136591827E0)[&rate=5.464308098485543E-4]:6.697665878744E0,20[&rate=5.464308098485543E-4]:9.298802470571E0)[&rate=0.0011903955275399374]:2.969129778373E1)[&rate=8.596185882053694E-4]:3.418768077616E1,(((((2[&rate=3.8135837820993217E-4]:1.823047104644E0,4[&rate=2.838426851924642E-4]:1.823047104644E0)[&rate=2.9557301897618183E-4]:8.876139168213E-1,3[&rate=5.104931365307473E-4]:2.710661021466E0)[&rate=4.765390606058314E-4]:7.097861605286E0,5[&rate=5.718006438204436E-4]:9.808522626752E0)[&rate=0.0010283876223065997]:2.896146350433E0,((7[&rate=2.140820639660861E-4]:6.890028910286E0,6[&rate=6.125422410559622E-4]:6.890028910286E0)[&rate=6.125422410559622E-4]:1.722170571415E0,1[&rate=2.140820639660861E-4]:8.6121994817E0)[&rate=4.440287602945656E-4]:4.092469495485E0)[&rate=4.3342708396826285E-4]:5.874530745667E1,((30[&rate=7.868066732579518E-4]:4.955791517637E1,26[&rate=8.33695512946248E-4]:4.955791517637E1)[&rate=9.510028679544571E-4]:1.453306352546E1,32[&rate=3.9171111794382744E-4]:6.409097870183E1)[&rate=4.989828567459821E-4]:7.358997732029E0)[&rate=5.104931365307473E-4]:1.727804596602E0)[&rate=0.0012665630298399392]:9.944861694346E-1)[&rate=2.140820639660861E-4]:1.339029183631E0)[&rate=5.985593754784308E-4]:1.403669796158E0)[&rate=8.33695512946248E-4]:3.551843478628E0,(17[&rate=7.868066732579518E-4]:6.806920426438E1,(27[&rate=4.765390606058314E-4]:3.332034268593E1,28[&rate=0.0010283876223065997]:3.332034268593E1)[&rate=6.125422410559622E-4]:3.474886157845E1)[&rate=3.7099368123750067E-4]:1.239760539393E1)[&rate=0.0021862617091201316]:4.27947574281E1); +tree STATE_230000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55116.46428828211,EEF_ucld_branchRates=-266.168517335019,lnP=-55116.46428828211,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.864651165502172E-4]:8.946872753087E0,9[&rate=0.0014716887443197689]:8.946872753087E0)[&rate=2.9492687408259004E-4]:7.998664511705E0,15[&rate=4.86434263879698E-4]:1.694553726479E1)[&rate=9.919373054448285E-4]:9.789587979325E1,(14[&rate=0.0013880534066486683]:4.219279614953E1,24[&rate=0.0010522820643693357]:4.219279614953E1)[&rate=0.0010522820643693357]:7.264862090851E1)[&rate=0.0013880534066486683]:3.574456501522E0,(((((19[&rate=7.416445003095864E-4]:1.776595165597E1,18[&rate=2.9492687408259004E-4]:1.776595165597E1)[&rate=3.7295002432413227E-4]:5.417990729825E1,((33[&rate=6.802840492363963E-4]:6.285386287326E1,13[&rate=4.621271993041141E-4]:6.285386287326E1)[&rate=3.5897132409963144E-4]:6.066964166444E0,(11[&rate=4.985653507781451E-4]:1.794032466764E1,29[&rate=3.290596641721155E-4]:1.794032466764E1)[&rate=7.416445003095864E-4]:5.098050237207E1)[&rate=0.001021008341899421]:3.025031914517E0)[&rate=5.229063395180507E-4]:2.864772259616E0,((10[&rate=7.58122347985199E-4]:2.382916860985E1,31[&rate=9.151237982927407E-4]:2.382916860985E1)[&rate=5.107149970086742E-4]:4.988005551917E1,23[&rate=3.1269730610201403E-4]:7.370922412902E1)[&rate=9.392231438408163E-4]:1.101407084822E0)[&rate=8.300541190317287E-4]:1.628475552785E0,(25[&rate=7.416445003095864E-4]:7.499727577167E1,(12[&rate=0.0011231041105578346]:7.129137640541E1,((16[&rate=3.996146343014295E-4]:3.84143092485E1,((22[&rate=5.981295680598041E-4]:2.345592507696E0,21[&rate=9.151237982927407E-4]:2.345592507696E0)[&rate=6.112086770117548E-4]:4.883214018256E0,20[&rate=9.151237982927407E-4]:7.228806525952E0)[&rate=0.0013880534066486683]:3.118550272255E1)[&rate=0.001021008341899421]:3.153878034622E1,(((((2[&rate=1.7622513012758545E-4]:1.746525250549E0,4[&rate=7.416445003095864E-4]:1.746525250549E0)[&rate=6.51817208154736E-4]:1.695301949657E0,3[&rate=7.101348153413308E-4]:3.441827200206E0)[&rate=4.86434263879698E-4]:8.987770922479E0,5[&rate=2.5202392243665493E-4]:1.242959812268E1)[&rate=2.7510662273445163E-4]:1.399585126487E0,((7[&rate=6.658930687232239E-4]:7.936042114342E0,6[&rate=6.51817208154736E-4]:7.936042114342E0)[&rate=7.416445003095864E-4]:1.233361347768E0,1[&rate=4.621271993041141E-4]:9.169403462111E0)[&rate=6.112086770117548E-4]:4.659779787061E0)[&rate=4.742970970643641E-4]:5.295448077112E1,((30[&rate=9.392231438408163E-4]:5.207569280839E1,26[&rate=5.599476909135095E-4]:5.207569280839E1)[&rate=0.0013880534066486683]:8.448477097462E0,32[&rate=5.981295680598041E-4]:6.052416990585E1)[&rate=6.380284257318137E-4]:6.259494114445E0)[&rate=5.475015856202499E-4]:3.169425574422E0)[&rate=9.647591112933375E-4]:1.338286810697E0)[&rate=6.112086770117548E-4]:3.705899366254E0)[&rate=9.919373054448285E-4]:1.441830994959E0)[&rate=5.725204673602834E-4]:2.571027976229E0,(17[&rate=9.151237982927407E-4]:6.537177201407E1,(27[&rate=2.5202392243665493E-4]:2.637320225588E1,28[&rate=0.001260280352847822]:2.637320225588E1)[&rate=5.852407195139706E-4]:3.899856975818E1)[&rate=5.351614300644995E-4]:1.363836272879E1)[&rate=0.0019479078257069115]:3.940573881671E1); +tree STATE_240000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55155.69876349511,EEF_ucld_branchRates=-266.168517335019,lnP=-55155.69876349511,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.8251464750050126E-4]:7.376085177547E0,9[&rate=6.678503681732938E-4]:7.376085177547E0)[&rate=4.158894016665897E-4]:9.852725304484E0,15[&rate=6.076994415428504E-4]:1.722881048203E1)[&rate=7.779820997898537E-4]:9.912635252906E1,(14[&rate=9.432701328890578E-4]:4.636291863351E1,24[&rate=8.74475454513574E-4]:4.636291863351E1)[&rate=7.779820997898537E-4]:6.999224437758E1)[&rate=7.387833899944934E-4]:1.039827694925E1,(((((19[&rate=7.674988549336909E-4]:1.819234881337E1,18[&rate=6.897135604064218E-4]:1.819234881337E1)[&rate=4.158894016665897E-4]:5.395076714092E1,((33[&rate=9.167010157627459E-4]:6.291553049837E1,13[&rate=5.493522205150319E-4]:6.291553049837E1)[&rate=4.538967355827217E-4]:7.643435953195E0,(11[&rate=5.820122485848653E-4]:1.878494072344E1,29[&rate=6.141526479412304E-4]:1.878494072344E1)[&rate=7.387833899944934E-4]:5.177402572812E1)[&rate=8.007450681052182E-4]:1.584149502724E0)[&rate=5.357712051386123E-4]:3.617548543062E0,((10[&rate=5.357712051386123E-4]:2.571620465192E1,31[&rate=5.493522205150319E-4]:2.571620465192E1)[&rate=5.755689718723143E-4]:4.985089782615E1,23[&rate=4.3026094182591046E-4]:7.556710247808E1)[&rate=8.007450681052182E-4]:1.935620192745E-1)[&rate=5.755689718723143E-4]:2.925973442096E0,(25[&rate=6.076994415428504E-4]:7.773383525319E1,(12[&rate=7.779820997898537E-4]:7.682030100078E1,((16[&rate=6.749927897987759E-4]:3.438891048061E1,((22[&rate=7.575104669316774E-4]:3.208848773241E0,21[&rate=7.779820997898537E-4]:3.208848773241E0)[&rate=5.426153786063185E-4]:4.313488182638E0,20[&rate=5.884360103547109E-4]:7.522336955879E0)[&rate=6.337507336541638E-4]:2.686657352473E1)[&rate=7.575104669316774E-4]:4.015334495018E1,(((((3[&rate=4.990635943761076E-4]:3.259901371985E0,4[&rate=6.608329332025198E-4]:3.259901371985E0)[&rate=5.56000278946673E-4]:6.03365193068E-1,2[&rate=6.20638808871782E-4]:3.863266565053E0)[&rate=9.167010157627459E-4]:8.700582784871E0,5[&rate=6.539267122384268E-4]:1.256384934992E1)[&rate=6.403973584897976E-4]:1.798458470608E0,((7[&rate=4.538967355827217E-4]:8.725549855568E0,6[&rate=5.884360103547109E-4]:8.725549855568E0)[&rate=6.471188731100808E-4]:8.913265284773E-1,1[&rate=3.3459431809514713E-4]:9.616876384045E0)[&rate=6.012690830284092E-4]:4.745431436488E0)[&rate=7.131545783796651E-4]:5.895297231644E1,((30[&rate=7.479557560928514E-4]:5.247376179064E1,26[&rate=6.141526479412304E-4]:5.247376179064E1)[&rate=6.749927897987759E-4]:1.274732173089E1,32[&rate=4.7359670386047534E-4]:6.522108352153E1)[&rate=3.984669951725629E-4]:8.094196615441E0)[&rate=3.984669951725629E-4]:1.226975293818E0)[&rate=8.941511668993531E-4]:2.278045569988E0)[&rate=5.56000278946673E-4]:9.135342524058E-1)[&rate=6.608329332025198E-4]:9.528026862618E-1)[&rate=4.6410941974220723E-4]:1.351545062826E0,(17[&rate=8.266241431077436E-4]:6.861746520088E1,(27[&rate=7.479557560928514E-4]:2.598892152779E1,28[&rate=9.167010157627459E-4]:2.598892152779E1)[&rate=6.141526479412304E-4]:4.262854367309E1)[&rate=6.822751016449409E-4]:1.142071780139E1)[&rate=0.001081661778119477]:4.671525695806E1); +tree STATE_250000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55123.874381520814,EEF_ucld_branchRates=-266.168517335019,lnP=-55123.874381520814,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.899554123116986E-4]:8.010468338601E0,9[&rate=7.099213264092859E-4]:8.010468338601E0)[&rate=2.1992470668310922E-4]:7.975263268359E0,15[&rate=3.268362702723446E-4]:1.598573160696E1)[&rate=8.576699026449706E-4]:1.018776668372E2,(14[&rate=0.0011605423745626728]:4.014191434318E1,24[&rate=0.0011057636595465377]:4.014191434318E1)[&rate=8.576699026449706E-4]:7.772148410102E1)[&rate=3.9200346368564823E-4]:8.521675449711E0,(((((19[&rate=9.131384810748684E-4]:1.509672965281E1,18[&rate=8.093835734402907E-4]:1.509672965281E1)[&rate=2.1992470668310922E-4]:5.249593940774E1,((33[&rate=9.784856722388653E-4]:5.665235979749E1,13[&rate=4.4558537495710846E-4]:5.665235979749E1)[&rate=5.130558376650936E-4]:8.75897244407E0,(11[&rate=3.813384350165942E-4]:1.423716787937E1,29[&rate=4.1332044153065964E-4]:1.423716787937E1)[&rate=0.0012250848059085057]:5.117416436219E1)[&rate=3.7063634195001483E-4]:2.181336818987E0)[&rate=1.7584770513154522E-4]:3.708359566429E0,((10[&rate=8.093835734402907E-4]:2.331514079669E1,31[&rate=8.093835734402907E-4]:2.331514079669E1)[&rate=4.786624901211511E-4]:4.747798077248E1,23[&rate=4.1332044153065964E-4]:7.079312156917E1)[&rate=2.791275174935962E-4]:5.079070578027E-1)[&rate=6.448156510984158E-4]:1.754779604584E0,(25[&rate=8.327544557556757E-4]:7.208272140579E1,(12[&rate=7.873631072590932E-4]:6.936023906671E1,((16[&rate=5.014133335006029E-4]:3.30690456666E1,((22[&rate=5.492997768246529E-4]:2.966832479535E0,21[&rate=8.576699026449706E-4]:2.966832479535E0)[&rate=4.899554123116986E-4]:3.865748925843E0,20[&rate=4.6751556386902076E-4]:6.832581405379E0)[&rate=0.001403430609861371]:2.623646426123E1)[&rate=8.576699026449706E-4]:3.43967220913E1,(((((3[&rate=2.659524305091982E-4]:2.326198315454E0,4[&rate=8.327544557556757E-4]:2.326198315454E0)[&rate=2.0039513869275685E-4]:2.209515542693E-1,2[&rate=5.618954863008907E-4]:2.547149869723E0)[&rate=5.88011293185396E-4]:8.210045494478E0,5[&rate=4.0265649202691085E-4]:1.07571953642E1)[&rate=3.154354468140976E-4]:2.593063080144E0,((7[&rate=2.659524305091982E-4]:7.863635979999E0,6[&rate=5.747900226721453E-4]:7.863635979999E0)[&rate=5.618954863008907E-4]:1.484599041646E0,1[&rate=2.1992470668310922E-4]:9.348235021644E0)[&rate=5.014133335006029E-4]:4.002023422701E0)[&rate=4.564960091575508E-4]:5.309789312895E1,((30[&rate=5.88011293185396E-4]:4.865557967504E1,26[&rate=4.6751556386902076E-4]:4.865557967504E1)[&rate=6.448156510984158E-4]:8.996540285965E0,32[&rate=4.240166239193767E-4]:5.7652119961E1)[&rate=5.249032948871343E-4]:8.796031612296E0)[&rate=0.0012250848059085057]:1.017616184606E0)[&rate=8.576699026449706E-4]:1.894471308809E0)[&rate=2.3677456875292215E-4]:2.722482339077E0)[&rate=6.299533742623575E-4]:9.730868257685E-1)[&rate=7.665319480388039E-4]:2.307306675406E0,(17[&rate=6.299533742623575E-4]:6.814946361734E1,(27[&rate=2.916754413793474E-4]:2.169840121466E1,28[&rate=0.0017552066715512142]:2.169840121466E1)[&rate=6.155581525306367E-4]:4.645106240268E1)[&rate=5.747900226721453E-4]:7.213651289622E0)[&rate=0.0011605423745626728]:5.102195898695E1); +tree STATE_260000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.334655926505,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.334655926505,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.809250666934111E-4]:9.662700351991E0,9[&rate=5.809250666934111E-4]:9.662700351991E0)[&rate=5.809250666934111E-4]:6.172952570053E0,15[&rate=8.292344534019142E-4]:1.583565292204E1)[&rate=8.640114645821435E-4]:9.752992659755E1,(14[&rate=9.250504104408812E-4]:4.566547331292E1,24[&rate=8.461399938488513E-4]:4.566547331292E1)[&rate=0.001070627032288432]:6.770010620667E1)[&rate=0.0010345475242634228]:1.662895304114E1,(((((19[&rate=7.691530363702429E-4]:1.191548328379E1,18[&rate=9.03265830542768E-4]:1.191548328379E1)[&rate=3.292126870354316E-4]:5.928238950981E1,((33[&rate=8.292344534019142E-4]:5.781635726456E1,13[&rate=4.139029439435232E-4]:5.781635726456E1)[&rate=3.292126870354316E-4]:1.190857798178E1,(11[&rate=8.829939145816595E-4]:1.219832246011E1,29[&rate=5.149293116074142E-4]:1.219832246011E1)[&rate=0.0011125076546165285]:5.752661278623E1)[&rate=6.611383920080252E-4]:1.47293754726E0)[&rate=4.8635113474753463E-4]:1.797790622777E0,((10[&rate=4.2513758108681394E-4]:2.429794011766E1,31[&rate=6.299749185445351E-4]:2.429794011766E1)[&rate=3.898314073787122E-4]:4.828703894789E1,23[&rate=6.0021320215644E-4]:7.258497906555E1)[&rate=5.619333843934563E-4]:4.106843508257E-1)[&rate=0.0010345475242634228]:1.880518636669E0,(25[&rate=6.82950813972212E-4]:7.40455063634E1,(((16[&rate=5.809250666934111E-4]:3.616424578997E1,((22[&rate=8.640114645821435E-4]:2.116227142917E0,21[&rate=6.505641442637092E-4]:2.116227142917E0)[&rate=2.8093616441165575E-4]:7.514593712576E0,20[&rate=7.058089541823855E-4]:9.630820855493E0)[&rate=0.0012250412370662003]:2.653342493447E1)[&rate=0.0011125076546165285]:3.262149192011E1,12[&rate=8.292344534019142E-4]:6.878573771008E1)[&rate=4.7663403256626493E-4]:2.927315398849E0,(((30[&rate=6.942360392181486E-4]:5.144030241246E1,26[&rate=4.021762909696626E-4]:5.144030241246E1)[&rate=8.292344534019142E-4]:1.164333091929E1,32[&rate=5.243418387672317E-4]:6.308363333175E1)[&rate=2.3547687063467154E-4]:7.471849323344E0,((((2[&rate=6.611383920080252E-4]:2.181103920635E0,4[&rate=6.299749185445351E-4]:2.181103920635E0)[&rate=6.942360392181486E-4]:1.116675290483E0,3[&rate=6.100071063168226E-4]:3.297779211117E0)[&rate=8.131752931324965E-4]:6.966446666251E0,5[&rate=3.4690244408066564E-4]:1.026422587737E1)[&rate=6.505641442637092E-4]:2.510177664722E0,((7[&rate=5.149293116074142E-4]:8.231111619586E0,6[&rate=6.299749185445351E-4]:8.231111619586E0)[&rate=4.95955940606843E-4]:1.621865126169E0,1[&rate=3.898314073787122E-4]:9.852976745755E0)[&rate=5.431149481110663E-4]:2.921426796335E0)[&rate=5.809250666934111E-4]:5.778107911301E1)[&rate=8.640114645821435E-4]:1.15757045383E0)[&rate=3.082072809575134E-4]:2.332453254472E0)[&rate=6.82950813972212E-4]:8.306756896436E-1)[&rate=5.149293116074142E-4]:2.894113703585E0,(17[&rate=8.829939145816595E-4]:6.720925448032E1,(27[&rate=4.139029439435232E-4]:2.178456098355E1,28[&rate=0.0014355542947928142]:2.178456098355E1)[&rate=5.525103202286241E-4]:4.542469349677E1)[&rate=5.713998313480698E-4]:1.056104127631E1)[&rate=8.461399938488513E-4]:5.22242368041E1); +tree STATE_270000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55165.28615315586,EEF_ucld_branchRates=-266.168517335019,lnP=-55165.28615315586,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.006551510069631E-4]:9.216222644659E0,9[&rate=7.891698438365708E-4]:9.216222644659E0)[&rate=3.3944522902782965E-4]:6.547491775745E0,15[&rate=5.294908568002557E-4]:1.57637144204E1)[&rate=4.543132114766331E-4]:1.00779241961E2,(14[&rate=0.0012700445383579026]:5.201211307272E1,24[&rate=8.090773886847943E-4]:5.201211307272E1)[&rate=7.361743943246848E-4]:6.453084330864E1)[&rate=7.528646949061466E-4]:1.271435523959E1,(((((19[&rate=5.80673933694278E-4]:1.155072879778E1,18[&rate=5.596243809637789E-4]:1.155072879778E1)[&rate=2.610936702063594E-4]:5.77562917866E1,((11[&rate=5.006551510069631E-4]:1.2024123401E1,29[&rate=6.258683406009913E-4]:1.2024123401E1)[&rate=6.141183967746332E-4]:5.725551857074E1,(33[&rate=9.70177762278766E-4]:6.001039094335E1,13[&rate=3.169125810008145E-4]:6.001039094335E1)[&rate=6.906715373469237E-4]:9.2692510284E0)[&rate=9.70177762278766E-4]:2.737861264032E-2)[&rate=5.80673933694278E-4]:3.338295021092E0,((10[&rate=8.090773886847943E-4]:2.168219941995E1,31[&rate=5.006551510069631E-4]:2.168219941995E1)[&rate=4.360145056883491E-4]:4.962545211304E1,23[&rate=4.634815603983628E-4]:7.130765153299E1)[&rate=0.0014123522753192602]:1.337664072489E0)[&rate=4.8193742859150077E-4]:3.132275669043E0,(25[&rate=4.8193742859150077E-4]:7.508448052232E1,(12[&rate=8.534053373149784E-4]:7.410475478344E1,((16[&rate=6.141183967746332E-4]:3.244440042208E1,((22[&rate=7.891698438365708E-4]:2.847277696044E0,21[&rate=5.80673933694278E-4]:2.847277696044E0)[&rate=5.393684881770637E-4]:5.89875776013E0,20[&rate=4.360145056883491E-4]:8.746035456174E0)[&rate=8.090773886847943E-4]:2.369836496591E1)[&rate=0.0010544401063953448]:4.092655644181E1,(((((2[&rate=2.772388077716147E-4]:1.525125913076E0,4[&rate=7.528646949061466E-4]:1.525125913076E0)[&rate=3.9904892903399285E-4]:7.897437205593E-1,3[&rate=5.596243809637789E-4]:2.314869633635E0)[&rate=4.912559379151812E-4]:8.037542741969E0,5[&rate=3.5002817467388273E-4]:1.03524123756E1)[&rate=7.528646949061466E-4]:2.616619617046E0,((7[&rate=2.610936702063594E-4]:6.832593571786E0,6[&rate=5.494069757001138E-4]:6.832593571786E0)[&rate=3.3944522902782965E-4]:8.729201489217E-1,1[&rate=3.284435843723082E-4]:7.705513720708E0)[&rate=3.0470020509434296E-4]:5.263518271942E0)[&rate=4.083888389954144E-4]:5.931912171135E1,((30[&rate=5.700398621960739E-4]:5.16233225992E1,26[&rate=6.026881153401965E-4]:5.16233225992E1)[&rate=8.090773886847943E-4]:8.589691454786E0,32[&rate=4.268491568816995E-4]:6.021301405399E1)[&rate=2.17694653130259E-4]:1.207513965001E1)[&rate=4.083888389954144E-4]:1.082803159893E0)[&rate=2.610936702063594E-4]:7.337979195427E-1)[&rate=6.141183967746332E-4]:9.797257388783E-1)[&rate=4.7268441462324016E-4]:6.931107522037E-1)[&rate=7.361743943246848E-4]:3.149251944887E0,(17[&rate=7.528646949061466E-4]:6.622005867641E1,(27[&rate=5.006551510069631E-4]:2.112514048258E1,28[&rate=9.70177762278766E-4]:2.112514048258E1)[&rate=7.203048986191872E-4]:4.509491819383E1)[&rate=2.42087209847687E-4]:1.2706784543E1)[&rate=9.70177762278766E-4]:5.033046840154E1); +tree STATE_280000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55154.62893278322,EEF_ucld_branchRates=-266.168517335019,lnP=-55154.62893278322,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.67937832109154E-4]:9.324022249632E0,9[&rate=8.685333681916521E-4]:9.324022249632E0)[&rate=6.119125165592457E-4]:5.451714150658E0,15[&rate=7.226901849256293E-4]:1.477573640029E1)[&rate=5.67937832109154E-4]:1.102123127089E2,(14[&rate=8.887593480638219E-4]:5.343643217535E1,24[&rate=6.585314072905979E-4]:5.343643217535E1)[&rate=9.575209335882666E-4]:7.155161693384E1)[&rate=6.23270344237514E-4]:3.762323644792E0,(((((19[&rate=4.171566288888361E-4]:1.076331021604E1,18[&rate=0.0010125671377771536]:1.076331021604E1)[&rate=2.526976005406079E-4]:5.684259632292E1,((11[&rate=6.832531676116348E-4]:1.342794581663E1,29[&rate=3.3797931312339437E-4]:1.342794581663E1)[&rate=8.887593480638219E-4]:5.378047751263E1,(33[&rate=8.493736318275727E-4]:5.729102533641E1,13[&rate=4.725703259597234E-4]:5.729102533641E1)[&rate=6.465584308436081E-4]:9.917397992853E0)[&rate=9.102028506631125E-4]:3.974832096994E-1)[&rate=2.8086361728778313E-4]:3.515635947371E0,((10[&rate=4.938230808343252E-4]:2.548020560132E1,31[&rate=4.171566288888361E-4]:2.548020560132E1)[&rate=2.526976005406079E-4]:4.525962456202E1,23[&rate=5.465723073712588E-4]:7.073983016334E1)[&rate=3.0280044160083824E-4]:3.817123229958E-1)[&rate=5.67937832109154E-4]:2.633980839513E0,(25[&rate=6.585314072905979E-4]:7.215244460275E1,(12[&rate=8.493736318275727E-4]:7.069383862203E1,((16[&rate=8.887593480638219E-4]:3.177610193742E1,((22[&rate=6.960547971646544E-4]:2.8213870573E0,21[&rate=0.001624246118820065]:2.8213870573E0)[&rate=5.787495712971688E-4]:4.481017413823E0,20[&rate=3.6718131741729384E-4]:7.302404471123E0)[&rate=0.0014613608586144162]:2.44736974663E1)[&rate=0.0010787688057570266]:3.708473833888E1,(((30[&rate=0.0010787688057570266]:4.693507744993E1,26[&rate=6.960547971646544E-4]:4.693507744993E1)[&rate=0.001214403015143637]:1.005751037594E1,32[&rate=3.214285181677186E-4]:5.699258782587E1)[&rate=4.938230808343252E-4]:1.01451598243E1,((((2[&rate=5.254331258263524E-4]:2.321051958735E0,4[&rate=4.5093585085369085E-4]:2.321051958735E0)[&rate=8.685333681916521E-4]:9.340372945365E-1,3[&rate=7.365935141454817E-4]:3.255089253272E0)[&rate=9.330477893991243E-4]:7.70796893671E0,5[&rate=8.311541376716791E-4]:1.096305818998E1)[&rate=6.23270344237514E-4]:1.143868969622E0,((7[&rate=3.0280044160083824E-4]:7.433658599149E0,6[&rate=8.685333681916521E-4]:7.433658599149E0)[&rate=6.465584308436081E-4]:8.516534188969E-1,1[&rate=5.465723073712588E-4]:8.285312018046E0)[&rate=5.896706675755208E-4]:3.821615141558E0)[&rate=5.896706675755208E-4]:5.503082049057E1)[&rate=5.043731312931637E-4]:1.72309262613E0)[&rate=0.0010439764880436895]:1.832998345725E0)[&rate=3.6718131741729384E-4]:1.458605980721E0)[&rate=5.787495712971688E-4]:1.603078723095E0)[&rate=3.804736424735575E-4]:3.454537513343E0,(17[&rate=6.960547971646544E-4]:6.603433190355E1,(27[&rate=6.960547971646544E-4]:2.166882282827E1,28[&rate=9.330477893991243E-4]:2.166882282827E1)[&rate=7.971271993438931E-4]:4.436550907528E1)[&rate=4.6181578602507323E-4]:1.117572893564E1)[&rate=0.001214403015143637]:5.154031191479E1); +tree STATE_290000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55168.1943992586,EEF_ucld_branchRates=-266.168517335019,lnP=-55168.1943992586,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.049546374861198E-4]:9.540292420166E0,9[&rate=7.617581441720167E-4]:9.540292420166E0)[&rate=4.7057569015793627E-4]:6.502976981871E0,15[&rate=6.686814814394657E-4]:1.604326940204E1)[&rate=5.8601168941058E-4]:1.053633702946E2,(14[&rate=0.0011210504943764547]:4.713731829105E1,24[&rate=0.0011560680487425687]:4.713731829105E1)[&rate=0.0010395200102657517]:7.42693214056E1)[&rate=5.455900436793612E-4]:2.215508500204E0,(((12[&rate=0.0011560680487425687]:7.253198531598E1,((16[&rate=4.98794305882152E-4]:3.387469252705E1,((22[&rate=9.440234938375699E-4]:2.188923012432E0,21[&rate=6.416438372144103E-4]:2.188923012432E0)[&rate=7.234502449647192E-4]:6.017429434197E0,20[&rate=9.283390241818461E-4]:8.206352446629E0)[&rate=0.0013166794886332223]:2.566834008042E1)[&rate=6.77696121829087E-4]:3.622316521419E1,(((((2[&rate=8.246710875154395E-4]:1.57559358877E0,4[&rate=5.8601168941058E-4]:1.57559358877E0)[&rate=6.142680129545554E-4]:8.032480404976E-1,3[&rate=6.596781773271369E-4]:2.378841629267E0)[&rate=8.856354367044346E-4]:8.651894136452E0,5[&rate=4.131738396496856E-4]:1.103073576572E1)[&rate=9.440234938375699E-4]:1.662702481091E0,((7[&rate=6.958182637605437E-4]:7.358982762356E0,6[&rate=9.134416787359901E-4]:7.358982762356E0)[&rate=9.782507976782556E-4]:1.433141106139E0,1[&rate=7.328390722937088E-4]:8.792123868494E0)[&rate=4.355972008937653E-4]:3.901314378316E0)[&rate=7.141604248916641E-4]:5.560110880907E1,((30[&rate=7.818385176704547E-4]:4.868566802697E1,26[&rate=0.0010174419869202654]:4.868566802697E1)[&rate=9.134416787359901E-4]:9.027224166257E0,32[&rate=6.506709462819509E-4]:5.771289219323E1)[&rate=7.141604248916641E-4]:1.058165486265E1)[&rate=9.134416787359901E-4]:1.803310685363E0)[&rate=4.7057569015793627E-4]:2.434127574732E0)[&rate=6.77696121829087E-4]:3.409053515923E0,(25[&rate=7.921775173019889E-4]:7.538637242166E1,(((19[&rate=0.0014181819746135443]:1.490925621472E1,18[&rate=6.958182637605437E-4]:1.490925621472E1)[&rate=4.98794305882152E-4]:5.52089064628E1,((11[&rate=7.717057112306525E-4]:1.28180596078E1,29[&rate=4.355972008937653E-4]:1.28180596078E1)[&rate=7.717057112306525E-4]:5.611224247924E1,(33[&rate=7.423424056851332E-4]:6.156793119448E1,13[&rate=4.8527476918795156E-4]:6.156793119448E1)[&rate=5.455900436793612E-4]:7.362370892558E0)[&rate=6.049786355790377E-4]:1.187860590485E0)[&rate=0.0010174419869202654]:3.122548762763E0,((10[&rate=3.836020550570163E-4]:2.132261164815E1,31[&rate=7.423424056851332E-4]:2.132261164815E1)[&rate=3.3299066168863755E-4]:5.100755285858E1,23[&rate=5.8601168941058E-4]:7.233016450672E1)[&rate=8.992342669851183E-4]:9.105469335606E-1)[&rate=6.958182637605437E-4]:2.145660981375E0)[&rate=8.027455114222606E-4]:5.546664102421E-1)[&rate=8.360870006801218E-4]:2.967354707118E0,(17[&rate=0.0010174419869202654]:6.894815833019E1,(27[&rate=6.049786355790377E-4]:2.618011960531E1,28[&rate=8.992342669851183E-4]:2.618011960531E1)[&rate=9.440234938375699E-4]:4.276803872489E1)[&rate=7.818385176704547E-4]:9.960235208824E0)[&rate=9.283390241818461E-4]:4.471375465784E1); +tree STATE_300000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55132.59623971877,EEF_ucld_branchRates=-266.168517335019,lnP=-55132.59623971877,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.908663029074864E-4]:7.911731596326E0,9[&rate=0.0012516546287124552]:7.911731596326E0)[&rate=3.834222538046178E-4]:8.311455174376E0,15[&rate=3.834222538046178E-4]:1.62231867707E1)[&rate=0.0010398572221666416]:9.655134808129E1,(14[&rate=8.778763480603875E-4]:4.860834329075E1,24[&rate=8.430435189441829E-4]:4.860834329075E1)[&rate=6.690571448265439E-4]:6.416619156125E1)[&rate=9.16566866299512E-4]:9.893200971857E0,(((((19[&rate=4.2327661931886197E-4]:1.48690957839E1,18[&rate=6.252738503876218E-4]:1.48690957839E1)[&rate=3.834222538046178E-4]:5.558949284574E1,((33[&rate=8.600370857829747E-4]:5.844272610382E1,13[&rate=3.834222538046178E-4]:5.844272610382E1)[&rate=8.966744039383641E-4]:1.122184003649E1,(11[&rate=7.678637005980576E-4]:1.283679472264E1,29[&rate=6.04196669173907E-4]:1.283679472264E1)[&rate=7.28483409507692E-4]:5.682777141768E1)[&rate=8.112260595359019E-4]:7.9402248933E-1)[&rate=2.341392103882259E-4]:2.986737130795E0,((10[&rate=6.146820865735788E-4]:2.175170636289E1,31[&rate=6.359891655996406E-4]:2.175170636289E1)[&rate=2.818068867363656E-4]:5.10516708438E1,23[&rate=5.117770580466194E-4]:7.280337720669E1)[&rate=4.908663029074864E-4]:6.419485537447E-1)[&rate=4.908663029074864E-4]:1.738277572717E0,(25[&rate=6.04196669173907E-4]:7.437724879012E1,(12[&rate=0.0010110286062813426]:7.169769647969E1,((((((2[&rate=6.468457390587597E-4]:2.135880285989E0,4[&rate=0.0010110286062813426]:2.135880285989E0)[&rate=5.220931537724574E-4]:7.096917376896E-1,3[&rate=5.732101273053879E-4]:2.845572023678E0)[&rate=0.0012516546287124552]:8.495764400851E0,5[&rate=3.6828371356305604E-4]:1.134133642453E1)[&rate=6.920672133746293E-4]:1.4159713092E0,((7[&rate=5.732101273053879E-4]:7.510381766052E0,6[&rate=5.938007122174116E-4]:7.510381766052E0)[&rate=6.252738503876218E-4]:6.310691710318E-1,1[&rate=6.804516486627358E-4]:8.141450937084E0)[&rate=3.328515377591653E-4]:4.615856796644E0)[&rate=5.527744816716623E-4]:5.680481237646E1,((30[&rate=9.16566866299512E-4]:4.840544567402E1,26[&rate=7.678637005980576E-4]:4.840544567402E1)[&rate=9.377183904431869E-4]:8.419474162091E0,32[&rate=4.583283394926297E-4]:5.682491983611E1)[&rate=6.804516486627358E-4]:1.273720027408E1)[&rate=7.039271661531045E-4]:1.111664199506E0,(16[&rate=7.28483409507692E-4]:2.853190011783E1,((22[&rate=5.938007122174116E-4]:3.209401342811E0,21[&rate=9.16566866299512E-4]:3.209401342811E0)[&rate=3.105923709806773E-4]:4.859117733956E0,20[&rate=7.16056737599937E-4]:8.068519076767E0)[&rate=0.0014171218957608623]:2.046338104106E1)[&rate=8.600370857829747E-4]:4.214188419187E1)[&rate=0.0018798527971593962]:1.023912169989E0)[&rate=8.966744039383641E-4]:2.679552310432E0)[&rate=8.600370857829747E-4]:8.063545430355E-1)[&rate=6.252738503876218E-4]:3.115659224055E0,(17[&rate=9.16566866299512E-4]:6.919309877117E1,(27[&rate=5.117770580466194E-4]:2.635649247546E1,28[&rate=0.0010110286062813426]:2.635649247546E1)[&rate=7.16056737599937E-4]:4.28366062957E1)[&rate=3.328515377591653E-4]:9.106163786044E0)[&rate=0.0011951309095769684]:4.436847326664E1); +tree STATE_310000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55130.41940413208,EEF_ucld_branchRates=-266.168517335019,lnP=-55130.41940413208,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.215004685236421E-4]:9.596869029694E0,9[&rate=0.0011820142315545677]:9.596869029694E0)[&rate=2.1257967640872554E-4]:9.285215458404E0,15[&rate=4.321841028389267E-4]:1.88820844881E1)[&rate=7.024090834994813E-4]:1.009342547E2,(14[&rate=7.858861571154136E-4]:5.426581616028E1,24[&rate=0.00107003721364207]:5.426581616028E1)[&rate=9.24550727548799E-4]:6.555052302783E1)[&rate=2.5746278899740845E-4]:3.743112655792E0,(((((11[&rate=9.24550727548799E-4]:1.42927867756E1,29[&rate=5.862100955343091E-4]:1.42927867756E1)[&rate=5.11277384240552E-4]:5.999648893289E1,((33[&rate=5.215004685236421E-4]:5.82154150312E1,13[&rate=4.0257626840527953E-4]:5.82154150312E1)[&rate=2.8924504752140536E-4]:1.480171676267E1,(19[&rate=4.1251147473647627E-4]:1.559169646324E1,18[&rate=9.549504003786772E-4]:1.559169646324E1)[&rate=5.215004685236421E-4]:5.742543533063E1)[&rate=6.216428885757834E-4]:1.272143914612E0)[&rate=7.675382216072989E-4]:3.026570540967E0,((10[&rate=7.675382216072989E-4]:2.092584423989E1,31[&rate=6.600498216113497E-4]:2.092584423989E1)[&rate=3.029680215917263E-4]:5.539040911001E1,23[&rate=4.911554355930862E-4]:7.631625334991E1)[&rate=2.7426662809321254E-4]:9.995928995481E-1)[&rate=3.823681489908321E-4]:1.788779253211E0,(25[&rate=4.911554355930862E-4]:7.817912994073E1,(12[&rate=7.335071853736334E-4]:7.373620818133E1,((((((2[&rate=6.216428885757834E-4]:1.441198398024E0,4[&rate=5.530219628018802E-4]:1.441198398024E0)[&rate=6.340727511900543E-4]:1.465569659818E0,3[&rate=3.029680215917263E-4]:2.906768057841E0)[&rate=5.423551276906882E-4]:7.475744819758E0,5[&rate=4.0257626840527953E-4]:1.03825128776E1)[&rate=8.258719924401195E-4]:3.009763224904E0,((7[&rate=2.1257967640872554E-4]:9.225221133479E0,6[&rate=8.478401208423723E-4]:9.225221133479E0)[&rate=8.052810935201412E-4]:6.926992557314E-1,1[&rate=4.2237252624082025E-4]:9.91792038921E0)[&rate=3.3948051911189087E-4]:3.474355713293E0)[&rate=5.977394535330165E-4]:5.636795312324E1,((30[&rate=6.600498216113497E-4]:4.748328837986E1,26[&rate=4.7135608074158E-4]:4.748328837986E1)[&rate=8.258719924401195E-4]:1.174664897194E1,32[&rate=3.7202620506695253E-4]:5.92299373518E1)[&rate=2.1257967640872554E-4]:1.053029187395E1)[&rate=5.423551276906882E-4]:1.771635680995E0,(16[&rate=5.318539500964401E-4]:3.249975914016E1,((22[&rate=0.0011208041777194823]:2.861826301967E0,21[&rate=3.029680215917263E-4]:2.861826301967E0)[&rate=6.468631995012861E-4]:5.097384188511E0,20[&rate=2.5746278899740845E-4]:7.959210490478E0)[&rate=0.0015250143528459845]:2.454054864969E1)[&rate=8.052810935201412E-4]:3.903210576658E1)[&rate=7.675382216072989E-4]:2.20434327459E0)[&rate=6.216428885757834E-4]:4.442921759399E0)[&rate=5.11277384240552E-4]:9.254955619394E-1)[&rate=4.6153596993866433E-4]:4.210237756912E0,(17[&rate=8.052810935201412E-4]:7.019247016884E1,(27[&rate=5.862100955343091E-4]:2.660072595765E1,28[&rate=9.24550727548799E-4]:2.660072595765E1)[&rate=8.258719924401195E-4]:4.359174421118E1)[&rate=5.215004685236421E-4]:1.312239309074E1)[&rate=0.0018874586790647257]:4.024458858433E1); +tree STATE_320000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.699900765736,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.699900765736,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.246319856888717E-4]:7.118427479032E0,9[&rate=9.299699932480038E-4]:7.118427479032E0)[&rate=6.094707834923466E-4]:9.504645841972E0,15[&rate=6.543090854691401E-4]:1.6623073321E1)[&rate=6.393599900177117E-4]:1.057281502153E2,(14[&rate=9.93547772175196E-4]:5.019284738768E1,24[&rate=7.415748549493034E-4]:5.019284738768E1)[&rate=8.19083127441631E-4]:7.215837614859E1)[&rate=8.19083127441631E-4]:6.0383434624E0,(((((19[&rate=4.888362546431221E-4]:1.296803986341E1,18[&rate=6.618273569881965E-4]:1.296803986341E1)[&rate=3.8840572973900873E-4]:6.115630979737E1,((11[&rate=5.629330369055155E-4]:1.787225505841E1,29[&rate=6.92469402058816E-4]:1.787225505841E1)[&rate=6.543090854691401E-4]:5.465444187357E1,(33[&rate=6.319053141273234E-4]:6.370487132754E1,13[&rate=4.503930983050234E-4]:6.370487132754E1)[&rate=7.083059561640792E-4]:8.82182560445E0)[&rate=8.54705056925241E-4]:1.597652728787E0)[&rate=3.8840572973900873E-4]:1.365828616531E0,((10[&rate=7.977772664833451E-4]:2.308655932775E1,31[&rate=6.693905193533902E-4]:2.308655932775E1)[&rate=4.772123748209331E-4]:4.975927501897E1,23[&rate=5.866356564440887E-4]:7.284583434672E1)[&rate=5.287760243254088E-4]:2.644343930587E0)[&rate=8.422552253534779E-4]:2.44928904002E0,(25[&rate=6.770104562220707E-4]:7.594882108431E1,(12[&rate=6.468239089817403E-4]:7.454909489936E1,((((30[&rate=8.54705056925241E-4]:4.844184474952E1,26[&rate=7.164002618680337E-4]:4.844184474952E1)[&rate=7.50323317841633E-4]:1.402878357578E1,32[&rate=4.996532226662755E-4]:6.24706283253E1)[&rate=7.246319856888717E-4]:8.325465375286E0,(16[&rate=5.629330369055155E-4]:2.967735220753E1,((22[&rate=8.817851337273508E-4]:2.963807059063E0,21[&rate=4.888362546431221E-4]:2.963807059063E0)[&rate=8.422552253534779E-4]:5.301063838784E0,20[&rate=4.645285820432447E-4]:8.264870897847E0)[&rate=0.0013817590345164491]:2.141248130969E1)[&rate=8.422552253534779E-4]:4.111874149305E1)[&rate=0.0012207165228390658]:2.078375331494E0,((((2[&rate=5.7885857487836E-4]:1.419580890569E0,4[&rate=9.126486013770684E-4]:1.419580890569E0)[&rate=4.341441348773755E-4]:1.89009485968E0,3[&rate=5.463340111403293E-4]:3.309675750249E0)[&rate=6.169738622739973E-4]:8.799942733677E0,5[&rate=4.341441348773755E-4]:1.210961848393E1)[&rate=6.468239089817403E-4]:2.870674937931E0,((7[&rate=7.415748549493034E-4]:8.350818381711E0,6[&rate=8.54705056925241E-4]:8.350818381711E0)[&rate=6.468239089817403E-4]:1.826409952533E0,1[&rate=0.0010527099408096869]:1.017722833424E1)[&rate=7.50323317841633E-4]:4.803065087613E0)[&rate=6.92469402058816E-4]:5.789417561022E1)[&rate=8.19083127441631E-4]:1.674625867286E0)[&rate=5.7885857487836E-4]:1.399726184948E0)[&rate=9.126486013770684E-4]:1.990646233012E0)[&rate=8.422552253534779E-4]:2.546001699086E0,(17[&rate=8.966618569036918E-4]:7.476810363708E1,(27[&rate=4.1450725157693045E-4]:3.052819663716E1,28[&rate=7.779426097194149E-4]:3.052819663716E1)[&rate=6.693905193533902E-4]:4.423990699993E1)[&rate=6.244475446382894E-4]:5.717365379326E0)[&rate=0.0010206762515500797]:4.790409798226E1); +tree STATE_330000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55150.68417351364,EEF_ucld_branchRates=-266.168517335019,lnP=-55150.68417351364,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.267370274115018E-4]:7.361991745658E0,9[&rate=8.058333803676466E-4]:7.361991745658E0)[&rate=5.752204452569423E-4]:8.217519397444E0,15[&rate=3.4280389465168426E-4]:1.55795111431E1)[&rate=6.178696576812593E-4]:1.121300185519E2,(14[&rate=8.21496787546945E-4]:5.269347111054E1,24[&rate=8.753678164214186E-4]:5.269347111054E1)[&rate=0.001048162697724898]:7.501605858445E1)[&rate=6.73660376141134E-4]:8.687806329627E-1,(((((19[&rate=8.560642962408184E-4]:1.461028474314E1,18[&rate=6.449334844114626E-4]:1.461028474314E1)[&rate=4.84361723363163E-4]:5.483269631696E1,((11[&rate=5.835728409964524E-4]:1.837910983803E1,29[&rate=5.669297389573821E-4]:1.837910983803E1)[&rate=7.509367015695058E-4]:5.002908157062E1,(33[&rate=6.178696576812593E-4]:5.930958552889E1,13[&rate=5.752204452569423E-4]:5.930958552889E1)[&rate=3.733494926960959E-4]:9.098605879754E0)[&rate=3.2335625998363636E-4]:1.034789651449E0)[&rate=3.5907179922416946E-4]:3.698819082969E0,((10[&rate=8.058333803676466E-4]:1.691095371298E1,31[&rate=5.341189312251873E-4]:1.691095371298E1)[&rate=3.4280389465168426E-4]:5.406233729392E1,23[&rate=7.156111146909293E-4]:7.09732910069E1)[&rate=4.7577941169890247E-4]:2.168509136167E0)[&rate=6.005160845628879E-4]:3.296967999046E0,((12[&rate=8.381818200319026E-4]:7.132654840387E1,((((30[&rate=5.92000208547334E-4]:4.711464225749E1,26[&rate=5.752204452569423E-4]:4.711464225749E1)[&rate=2.9787894757300244E-4]:1.202725775837E1,32[&rate=4.928256325983023E-4]:5.914190001586E1)[&rate=5.586875509995687E-4]:7.917260405215E0,((((2[&rate=8.058333803676466E-4]:1.773345628171E0,4[&rate=7.77034285736795E-4]:1.773345628171E0)[&rate=6.542981370970247E-4]:4.871143471618E-1,3[&rate=8.560642962408184E-4]:2.260459975333E0)[&rate=3.4280389465168426E-4]:8.982041059324E0,5[&rate=3.981673764036233E-4]:1.124250103466E1)[&rate=7.3870957731638E-4]:1.499708421486E0,((7[&rate=6.94022934235775E-4]:8.096903202374E0,6[&rate=5.422957184637918E-4]:8.096903202374E0)[&rate=4.0931668633523724E-4]:1.366302918064E0,1[&rate=4.581462416616338E-4]:9.463206120438E0)[&rate=3.981673764036233E-4]:3.279003335706E0)[&rate=3.733494926960959E-4]:5.431695096493E1)[&rate=5.504806755395354E-4]:2.780901157487E0,(16[&rate=4.396464931482944E-4]:3.146169648256E1,((22[&rate=5.669297389573821E-4]:2.358936842504E0,21[&rate=5.92000208547334E-4]:2.358936842504E0)[&rate=4.928256325983023E-4]:5.813636226925E0,20[&rate=7.636893068395057E-4]:8.172573069429E0)[&rate=0.0011639349916119906]:2.328912341314E1)[&rate=7.91050761124405E-4]:3.8378365096E1)[&rate=7.77034285736795E-4]:1.48648682531E0)[&rate=5.669297389573821E-4]:2.537411861735E0,25[&rate=6.357525898095115E-4]:7.386396026561E1)[&rate=7.77034285736795E-4]:2.574807876501E0)[&rate=5.011949275686088E-4]:5.428678406482E0,(17[&rate=0.0010080786852925971]:7.664498673683E1,(27[&rate=6.83703683844771E-4]:3.008953025608E1,28[&rate=8.753678164214186E-4]:3.008953025608E1)[&rate=6.83703683844771E-4]:4.655545648075E1)[&rate=0.0014773287130625684]:5.222459811767E0)[&rate=0.001048162697724898]:4.671086377936E1); +tree STATE_340000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55154.462720388954,EEF_ucld_branchRates=-266.168517335019,lnP=-55154.462720388954,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.322031738980447E-4]:7.110960557087E0,9[&rate=8.874573456287434E-4]:7.110960557087E0)[&rate=8.53353897275771E-4]:9.016801528496E0,15[&rate=4.8314888229290424E-4]:1.612776208558E1)[&rate=8.375836314210029E-4]:1.018290927039E2,(14[&rate=0.001440343582183076]:4.7866123793E1,24[&rate=9.258754664168605E-4]:4.7866123793E1)[&rate=9.258754664168605E-4]:7.009073099651E1)[&rate=8.699400919780453E-4]:9.807546549205E0,(((((19[&rate=9.701794524394316E-4]:1.643632740903E1,18[&rate=8.375836314210029E-4]:1.643632740903E1)[&rate=4.153983057077814E-4]:5.289331756293E1,((11[&rate=5.793413409001229E-4]:1.629416292415E1,29[&rate=3.535523156837782E-4]:1.629416292415E1)[&rate=7.556076522424077E-4]:5.183985696677E1,(33[&rate=7.942786168239969E-4]:5.708548006083E1,13[&rate=4.279363441751257E-4]:5.708548006083E1)[&rate=3.8758689612976977E-4]:1.104853983009E1)[&rate=5.793413409001229E-4]:1.195625081031E0)[&rate=7.091420288923245E-4]:1.46294344211E0,((10[&rate=3.535523156837782E-4]:2.242149938932E1,31[&rate=6.17301940386019E-4]:2.242149938932E1)[&rate=5.129814861594812E-4]:4.799820771613E1,23[&rate=4.6217491654455177E-4]:7.041970710545E1)[&rate=0.0011778662306653387]:3.728813086114E-1)[&rate=8.874573456287434E-4]:1.318284100875E0,((((((3[&rate=8.375836314210029E-4]:1.983429435512E0,4[&rate=6.77030406521497E-4]:1.983429435512E0)[&rate=7.680704346413822E-4]:3.704290476882E-1,2[&rate=6.269587865256051E-4]:2.3538584832E0)[&rate=6.17301940386019E-4]:9.65927981066E0,5[&rate=3.535523156837782E-4]:1.201313829386E1)[&rate=6.667217819047184E-4]:1.097905972325E0,((7[&rate=8.874573456287434E-4]:8.097071552139E0,6[&rate=7.809456266780934E-4]:8.097071552139E0)[&rate=3.0392383863093374E-4]:1.225804355877E0,1[&rate=6.982193404934955E-4]:9.322875908016E0)[&rate=6.367130721206366E-4]:3.788168358169E0)[&rate=3.8758689612976977E-4]:5.487441039956E1,(12[&rate=9.258754664168605E-4]:6.779915791495E1,((16[&rate=7.435172251548309E-4]:2.828444112199E1,((22[&rate=6.667217819047184E-4]:1.957722959022E0,21[&rate=0.0011778662306653387]:1.957722959022E0)[&rate=5.887620832904734E-4]:5.883323578657E0,20[&rate=7.435172251548309E-4]:7.841046537679E0)[&rate=0.0013185260143456783]:2.044339458431E1)[&rate=0.0010888460237397364]:3.830408600696E1,((30[&rate=5.226400493307603E-4]:4.996732430355E1,26[&rate=5.887620832904734E-4]:4.996732430355E1)[&rate=6.17301940386019E-4]:1.02238289706E1,32[&rate=5.032010301412316E-4]:6.019115327415E1)[&rate=5.032010301412316E-4]:6.397373854796E0)[&rate=9.060452512422987E-4]:1.210630786005E0)[&rate=3.320031199094297E-4]:1.862967507934E-1)[&rate=6.875227941944465E-4]:2.14411152907E0,25[&rate=6.269587865256051E-4]:7.012956619482E1)[&rate=6.17301940386019E-4]:1.98130632012E0)[&rate=4.153983057077814E-4]:5.863957905502E0,(17[&rate=6.077270569911687E-4]:6.858863512718E1,(27[&rate=3.0392383863093374E-4]:2.693752499056E1,28[&rate=8.375836314210029E-4]:2.693752499056E1)[&rate=6.465806354158344E-4]:4.165111013661E1)[&rate=6.17301940386019E-4]:9.386195293263E0)[&rate=9.471625022781013E-4]:4.978957091828E1); +tree STATE_350000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55158.78120421397,EEF_ucld_branchRates=-266.168517335019,lnP=-55158.78120421397,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.976498443899919E-4]:8.146619261731E0,9[&rate=6.933200778728209E-4]:8.146619261731E0)[&rate=4.567509631855265E-4]:8.057716531448E0,15[&rate=6.279729048958966E-4]:1.620433579318E1)[&rate=7.586062902511242E-4]:1.028556549081E2,(14[&rate=8.146392009328169E-4]:4.943107481667E1,24[&rate=9.90890947098375E-4]:4.943107481667E1)[&rate=5.573999675652063E-4]:6.962891588458E1)[&rate=7.292457147390183E-4]:6.851348270676E0,(((((19[&rate=5.967448132184707E-4]:1.601735201265E1,18[&rate=7.02023653430033E-4]:1.601735201265E1)[&rate=6.598886626137809E-4]:5.496260386491E1,((11[&rate=4.567509631855265E-4]:1.675122116137E1,29[&rate=8.273405373826303E-4]:1.675122116137E1)[&rate=6.045312629747295E-4]:5.36599861898E1,(33[&rate=7.199662305757283E-4]:5.972337527401E1,13[&rate=3.553190907233114E-4]:5.972337527401E1)[&rate=6.045312629747295E-4]:1.068783207716E1)[&rate=3.553190907233114E-4]:5.687485263905E-1)[&rate=6.358561464174929E-4]:4.74281214345E0,((10[&rate=5.493359842770327E-4]:2.416274021448E1,31[&rate=9.031280577243998E-4]:2.416274021448E1)[&rate=3.553190907233114E-4]:5.063272181251E1,23[&rate=6.201326341717853E-4]:7.479546202699E1)[&rate=5.15720880140721E-4]:9.27305994023E-1)[&rate=8.025176678172322E-4]:1.361720576652E0,((12[&rate=8.858675189388924E-4]:7.467006269997E1,((16[&rate=6.358561464174929E-4]:2.988419112727E1,((22[&rate=6.358561464174929E-4]:4.089133646355E0,21[&rate=8.548264185653991E-4]:4.089133646355E0)[&rate=6.358561464174929E-4]:3.632335905328E0,20[&rate=4.0124735555086076E-4]:7.721469551683E0)[&rate=0.0014204952540651091]:2.216272157559E1)[&rate=8.698308329569246E-4]:4.19723642235E1,(((((3[&rate=5.32854142920114E-4]:2.36292929089E0,4[&rate=6.680700213940627E-4]:2.36292929089E0)[&rate=7.909075324775936E-4]:5.945872884968E-1,2[&rate=7.586062902511242E-4]:2.957516579387E0)[&rate=4.0124735555086076E-4]:9.16757565541E0,5[&rate=6.358561464174929E-4]:1.21250922348E1)[&rate=8.548264185653991E-4]:1.513068271858E0,((7[&rate=4.567509631855265E-4]:8.83869652975E0,6[&rate=8.025176678172322E-4]:8.83869652975E0)[&rate=8.407033564991292E-4]:3.870016473871E-1,1[&rate=4.567509631855265E-4]:9.225698177137E0)[&rate=7.586062902511242E-4]:4.412462329519E0)[&rate=6.847707584367843E-4]:5.739248273797E1,((30[&rate=6.680700213940627E-4]:5.300231392856E1,26[&rate=6.358561464174929E-4]:5.300231392856E1)[&rate=6.279729048958966E-4]:1.098948553622E1,32[&rate=4.1767376072364735E-4]:6.399179946477E1)[&rate=0.0010554932447426986]:7.038843779856E0)[&rate=8.698308329569246E-4]:8.259121061443E-1)[&rate=5.811339012284636E-4]:2.813507349201E0)[&rate=5.32854142920114E-4]:1.73057248148E0,25[&rate=6.847707584367843E-4]:7.640063518145E1)[&rate=7.586062902511242E-4]:6.838534162116E-1)[&rate=5.493359842770327E-4]:6.259025726873E0,(17[&rate=8.407033564991292E-4]:7.292605898592E1,(27[&rate=7.909075324775936E-4]:3.225598665252E1,28[&rate=0.0010554932447426986]:3.225598665252E1)[&rate=8.273405373826303E-4]:4.06700723334E1)[&rate=4.3200806952934046E-4]:1.041745533861E1)[&rate=0.0011556611426329828]:4.256782464739E1); +tree STATE_360000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.800806365754,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.800806365754,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.4311804523790766E-4]:8.783838769548E0,9[&rate=6.137582486896784E-4]:8.783838769548E0)[&rate=3.2690498947440805E-4]:7.706307393504E0,15[&rate=6.419637517113855E-4]:1.649014616305E1)[&rate=7.048951427059834E-4]:1.069343331575E2,(14[&rate=8.499242652600086E-4]:5.140811671039E1,24[&rate=0.001049961290603911]:5.140811671039E1)[&rate=7.979266345419365E-4]:7.201636261018E1)[&rate=5.611853701195436E-4]:5.3286000825E0,(((((19[&rate=7.681783776877441E-4]:2.055513959858E1,18[&rate=4.603082758983865E-4]:2.055513959858E1)[&rate=4.603082758983865E-4]:5.489541797352E1,((11[&rate=6.936242686691796E-4]:1.790966895505E1,29[&rate=5.782872877772822E-4]:1.790966895505E1)[&rate=6.323741680819325E-4]:5.632657398739E1,(33[&rate=6.61810131887488E-4]:6.302593938133E1,13[&rate=5.276929046561798E-4]:6.302593938133E1)[&rate=7.048951427059834E-4]:1.121030356111E1)[&rate=8.141260489197513E-4]:1.214314629661E0)[&rate=3.8221167690877375E-4]:1.378298275432E0,((10[&rate=3.8221167690877375E-4]:2.382308580539E1,31[&rate=5.696954173510896E-4]:2.382308580539E1)[&rate=3.2690498947440805E-4]:5.040712588671E1,23[&rate=4.944111822799199E-4]:7.42302116921E1)[&rate=0.001049961290603911]:2.598644155439E0)[&rate=7.54409916762161E-4]:3.062831620774E0,((12[&rate=7.54409916762161E-4]:7.729074371521E1,((16[&rate=3.0756747990607903E-4]:3.360369834923E1,((22[&rate=0.0012761067208175848]:2.836941741998E0,21[&rate=5.696954173510896E-4]:2.836941741998E0)[&rate=5.696954173510896E-4]:5.161175712172E0,20[&rate=5.696954173510896E-4]:7.998117454171E0)[&rate=0.001049961290603911]:2.560558089506E1)[&rate=8.141260489197513E-4]:4.222308153672E1,(((((3[&rate=4.6898048171036455E-4]:2.406792353696E0,4[&rate=8.313970075590452E-4]:2.406792353696E0)[&rate=3.933922031889503E-4]:4.100971623359E-1,2[&rate=5.360108447665154E-4]:2.816889516032E0)[&rate=7.048951427059834E-4]:1.00457357115E1,5[&rate=6.137582486896784E-4]:1.286262522753E1)[&rate=7.54409916762161E-4]:1.403202006496E0,((7[&rate=3.8221167690877375E-4]:9.087952415232E0,6[&rate=5.696954173510896E-4]:9.087952415232E0)[&rate=4.7753967386017564E-4]:1.291202117212E0,1[&rate=8.499242652600086E-4]:1.037915453244E1)[&rate=7.54409916762161E-4]:3.88667270158E0)[&rate=5.527435549406016E-4]:5.858192118829E1,((30[&rate=6.61810131887488E-4]:4.819690353779E1,26[&rate=6.229787049135914E-4]:4.819690353779E1)[&rate=6.229787049135914E-4]:1.093898746808E1,32[&rate=3.933922031889503E-4]:5.913589100587E1)[&rate=4.4251214671918167E-4]:1.371185741645E1)[&rate=5.957724763243096E-4]:2.979031463635E0)[&rate=5.276929046561798E-4]:1.46396382926E0)[&rate=5.696954173510896E-4]:1.898695265558E0,25[&rate=5.193887842169909E-4]:7.918943898077E1)[&rate=7.286660951845471E-4]:7.022484875386E-1)[&rate=3.2690498947440805E-4]:4.398169438983E0,(17[&rate=8.141260489197513E-4]:7.452266354839E1,(27[&rate=4.3331965635190137E-4]:2.827850846454E1,28[&rate=7.826508548089032E-4]:2.827850846454E1)[&rate=8.499242652600086E-4]:4.624415508385E1)[&rate=2.8231233307561484E-4]:9.767193358899E0)[&rate=0.001171322357349016]:4.446322249578E1); +tree STATE_370000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55157.87866324824,EEF_ucld_branchRates=-266.168517335019,lnP=-55157.87866324824,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.4181627362247423E-4]:8.315142604445E0,9[&rate=0.0016673567228464923]:8.315142604445E0)[&rate=8.883716998705745E-4]:5.978668990044E0,15[&rate=0.0010723716744515542]:1.429381159449E1)[&rate=9.83143448209304E-4]:9.235922393964E1,(14[&rate=0.0014343668419339937]:4.357250958395E1,24[&rate=9.330615609201157E-4]:4.357250958395E1)[&rate=9.83143448209304E-4]:6.308052595018E1)[&rate=6.851579392556547E-4]:1.663771052083E1,(((((19[&rate=6.993619776470734E-4]:1.910034506632E1,18[&rate=4.2436747576320453E-4]:1.910034506632E1)[&rate=6.183979559555097E-4]:5.149309172831E1,((11[&rate=8.28954515728843E-4]:1.333652318424E1,29[&rate=6.851579392556547E-4]:1.333652318424E1)[&rate=6.993619776470734E-4]:5.339539405176E1,(33[&rate=6.31268113200611E-4]:5.91282304948E1,13[&rate=6.183979559555097E-4]:5.91282304948E1)[&rate=7.442189349659581E-4]:7.603686741205E0)[&rate=8.28954515728843E-4]:3.861519558626E0)[&rate=4.4905442524957666E-4]:8.754321978146E-1,((10[&rate=7.139171658343554E-4]:1.758196194018E1,31[&rate=6.576819979508072E-4]:1.758196194018E1)[&rate=2.6478132125188996E-4]:5.243139715121E1,23[&rate=6.183979559555097E-4]:7.001335909139E1)[&rate=6.183979559555097E-4]:1.455509901048E0)[&rate=5.565414148617573E-4]:2.989029694543E0,((12[&rate=0.0010723716744515542]:7.227118734875E1,((16[&rate=4.3680497588340414E-4]:3.115053906003E1,((22[&rate=0.00234851260340188]:3.576423722999E0,21[&rate=5.808682170887665E-4]:3.576423722999E0)[&rate=4.7315732912430397E-4]:5.351843114582E0,20[&rate=2.8795696960163826E-4]:8.92826683758E0)[&rate=0.0014343668419339937]:2.222227222245E1)[&rate=0.0010723716744515542]:3.805304310434E1,(((30[&rate=8.676645774083961E-4]:4.682690290496E1,26[&rate=6.057221206591573E-4]:4.682690290496E1)[&rate=9.83143448209304E-4]:8.585106042757E0,32[&rate=3.0779079881562997E-4]:5.541200894772E1)[&rate=3.7150997241419854E-4]:1.311572766937E1,((((3[&rate=6.057221206591573E-4]:2.00624551627E0,4[&rate=8.883716998705745E-4]:2.00624551627E0)[&rate=4.4905442524957666E-4]:3.743790061553E-1,2[&rate=2.353328247345734E-4]:2.380624522426E0)[&rate=5.44525320557687E-4]:8.317000481315E0,5[&rate=6.993619776470734E-4]:1.069762500374E1)[&rate=3.570585516928393E-4]:2.829234181494E0,((7[&rate=3.570585516928393E-4]:9.662792456532E0,6[&rate=9.330615609201157E-4]:9.662792456532E0)[&rate=4.969596804331286E-4]:1.197803511546E0,1[&rate=5.088197992272259E-4]:1.086059596808E1)[&rate=6.183979559555097E-4]:2.666263217157E0)[&rate=6.183979559555097E-4]:5.500087743185E1)[&rate=0.0010403363624404214]:6.758455472828E-1)[&rate=3.7150997241419854E-4]:3.067605184375E0)[&rate=2.8795696960163826E-4]:8.783763634266E-1,25[&rate=7.60043161401013E-4]:7.314956371217E1)[&rate=9.101261437479882E-4]:1.30833497481E0)[&rate=2.8795696960163826E-4]:2.376296477271E0,(17[&rate=0.0010403363624404214]:6.488913026364E1,(27[&rate=8.478912748901586E-4]:3.037036771261E1,28[&rate=9.330615609201157E-4]:3.037036771261E1)[&rate=8.107702239105428E-4]:3.451876255102E1)[&rate=5.44525320557687E-4]:1.194506490062E1)[&rate=0.0013562238249810736]:4.64565508907E1); +tree STATE_380000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.440705718844,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.440705718844,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.300355718922186E-4]:1.068842596899E1,9[&rate=5.927030123235871E-4]:1.068842596899E1)[&rate=4.946388713819909E-4]:7.532698206178E0,15[&rate=5.148507041000547E-4]:1.822112417517E1)[&rate=8.19223652045042E-4]:8.926885905889E1,(14[&rate=9.414113720627684E-4]:4.262300538861E1,24[&rate=9.208093019982979E-4]:4.262300538861E1)[&rate=0.001267020400048829]:6.486697784546E1)[&rate=0.0014788327092806757]:1.746258856737E1,(((((19[&rate=7.777515643369384E-4]:1.659527370825E1,18[&rate=6.320296356098543E-4]:1.659527370825E1)[&rate=3.015353636043785E-4]:5.345076960482E1,((33[&rate=6.420810609137986E-4]:5.868287654233E1,13[&rate=4.149792910606177E-4]:5.868287654233E1)[&rate=7.283635922829131E-4]:9.485657051462E0,(11[&rate=8.497606276817883E-4]:1.311724177462E1,29[&rate=6.220820095918839E-4]:1.311724177462E1)[&rate=8.497606276817883E-4]:5.505129181917E1)[&rate=5.048205710773698E-4]:1.877509719287E0)[&rate=5.733454989359751E-4]:3.257391158293E0,((10[&rate=6.220820095918839E-4]:1.786229447211E1,31[&rate=8.833244607115158E-4]:1.786229447211E1)[&rate=3.703670487289901E-4]:5.337649413829E1,23[&rate=5.83012087453606E-4]:7.12387886104E1)[&rate=4.39939676940408E-4]:2.064645860968E0)[&rate=6.944923092239646E-4]:2.565364863428E0,((12[&rate=8.497606276817883E-4]:7.202695159244E1,(((((3[&rate=0.0011534246814018545]:1.59927875846E0,4[&rate=6.320296356098543E-4]:1.59927875846E0)[&rate=4.0134088112779104E-4]:4.316662508647E-1,2[&rate=4.39939676940408E-4]:2.030945009325E0)[&rate=7.523504173782504E-4]:6.449771583781E0,5[&rate=6.320296356098543E-4]:8.480716593106E0)[&rate=8.19223652045042E-4]:3.021681218422E0,((7[&rate=7.05537103925075E-4]:7.420800311688E0,6[&rate=6.420810609137986E-4]:7.420800311688E0)[&rate=4.946388713819909E-4]:2.085547856727E0,1[&rate=6.220820095918839E-4]:9.506348168415E0)[&rate=5.443206596755824E-4]:1.996049643113E0)[&rate=5.345752877939442E-4]:5.880730348117E1,(((30[&rate=8.661158567947459E-4]:4.854464611914E1,26[&rate=4.842700412944149E-4]:4.854464611914E1)[&rate=6.836619954332643E-4]:1.010356632962E1,32[&rate=3.300355718922186E-4]:5.864821244876E1)[&rate=7.910785826432817E-4]:1.07182933723E1,(16[&rate=3.5194410341444544E-4]:3.315388639499E1,((22[&rate=9.874746298088218E-4]:2.86830789949E0,21[&rate=3.5194410341444544E-4]:2.86830789949E0)[&rate=6.944923092239646E-4]:5.231641151307E0,20[&rate=6.625613966424356E-4]:8.099949050798E0)[&rate=0.0012039957664519228]:2.505393734419E1)[&rate=9.63537778433646E-4]:3.621261942607E1)[&rate=9.63537778433646E-4]:9.431954716401E-1)[&rate=9.414113720627684E-4]:1.717250299744E0)[&rate=8.048845641275841E-4]:1.513579213489E0,25[&rate=6.024344352673019E-4]:7.354053080593E1)[&rate=6.836619954332643E-4]:2.328268528864E0)[&rate=6.320296356098543E-4]:2.132441059827E0,(17[&rate=0.001351128171264593]:7.120639282811E1,(27[&rate=4.149792910606177E-4]:3.17989535452E1,28[&rate=9.015069063559901E-4]:3.17989535452E1)[&rate=6.944923092239646E-4]:3.940743928291E1)[&rate=7.910785826432817E-4]:6.794847566518E0)[&rate=9.208093019982979E-4]:4.695133140681E1); +tree STATE_390000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55138.76717268659,EEF_ucld_branchRates=-266.168517335019,lnP=-55138.76717268659,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.194412310255505E-4]:8.971443223508E0,9[&rate=0.0012603622333371971]:8.971443223508E0)[&rate=7.62249216375599E-4]:1.033227464898E1,15[&rate=6.271073012109406E-4]:1.930371787249E1)[&rate=7.034051262285858E-4]:8.109029165265E1,(14[&rate=0.001023879422698331]:4.368567787646E1,24[&rate=0.0010009610619116393]:4.368567787646E1)[&rate=8.72231553672988E-4]:5.670833164868E1)[&rate=0.0013874958438491903]:2.342525720187E1,(((((19[&rate=0.0010009610619116393]:1.598482334271E1,18[&rate=6.592704433933293E-4]:1.598482334271E1)[&rate=3.9422745022133654E-4]:5.474767864421E1,((33[&rate=7.500433187382959E-4]:5.990701679245E1,13[&rate=4.7014722806882465E-4]:5.990701679245E1)[&rate=0.001104267729800632]:8.214709377202E0,(11[&rate=5.738566332374985E-4]:1.696223243839E1,29[&rate=6.592704433933293E-4]:1.696223243839E1)[&rate=5.738566332374985E-4]:5.115949373126E1)[&rate=6.811006178270707E-4]:2.610775817274E0)[&rate=6.921845701991627E-4]:2.494449633053E0,((10[&rate=0.0010751631190189267]:1.766330079674E1,31[&rate=0.001023879422698331]:1.766330079674E1)[&rate=3.9422745022133654E-4]:5.499177129578E1,23[&rate=5.070601095228625E-4]:7.265507209252E1)[&rate=0.0010009610619116393]:5.718795274591E-1)[&rate=6.271073012109406E-4]:2.265879219927E0,((12[&rate=7.147810734268206E-4]:6.974082395343E1,((16[&rate=4.42875295377153E-4]:3.169449078084E1,((22[&rate=9.592923486967802E-4]:3.085782616977E0,21[&rate=5.52203092850371E-4]:3.085782616977E0)[&rate=8.278781178422093E-4]:4.68246639389E0,20[&rate=9.220168757115878E-4]:7.768249010868E0)[&rate=0.001625239204547441]:2.392624176997E1)[&rate=8.569279808759052E-4]:3.741622917581E1,(((((3[&rate=6.811006178270707E-4]:1.545818970496E0,4[&rate=8.72231553672988E-4]:1.545818970496E0)[&rate=7.380788010391989E-4]:3.651000463885E-1,2[&rate=6.811006178270707E-4]:1.910919016885E0)[&rate=9.401765744044804E-4]:5.355920372509E0,5[&rate=4.2798970685944477E-4]:7.266839389393E0)[&rate=0.0012603622333371971]:3.847849325739E0,((7[&rate=3.9422745022133654E-4]:7.611990550623E0,1[&rate=7.263320637780899E-4]:7.611990550623E0)[&rate=6.921845701991627E-4]:1.179319527824E0,6[&rate=6.377739073706669E-4]:8.791310078446E0)[&rate=9.401765744044804E-4]:2.323378636686E0)[&rate=5.186699382892189E-4]:5.703981522381E1,((30[&rate=6.701351339879758E-4]:4.881277133852E1,26[&rate=8.421611739704576E-4]:4.881277133852E1)[&rate=7.747219715552721E-4]:8.283789932075E0,32[&rate=3.503637110685406E-4]:5.70965612706E1)[&rate=8.140320671818991E-4]:1.105794266834E1)[&rate=6.377739073706669E-4]:9.562160177127E-1)[&rate=0.0013874958438491903]:6.301039967813E-1)[&rate=5.300345259072631E-4]:3.602933592168E0,25[&rate=5.411993673429406E-4]:7.33437575456E1)[&rate=4.42875295377153E-4]:2.149073294311E0)[&rate=8.881324780254545E-4]:4.096502041586E0,(17[&rate=9.220168757115878E-4]:6.675074930378E1,(27[&rate=3.503637110685406E-4]:3.840417179183E1,28[&rate=7.747219715552721E-4]:3.840417179183E1)[&rate=7.263320637780899E-4]:2.834657751196E1)[&rate=4.2798970685944477E-4]:1.283858357771E1)[&rate=0.001048506396279708]:4.422993384551E1); +tree STATE_400000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55138.48500995097,EEF_ucld_branchRates=-266.168517335019,lnP=-55138.48500995097,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.3416937636545186E-4]:8.646902932921E0,9[&rate=9.921311955641207E-4]:8.646902932921E0)[&rate=2.772321517273265E-4]:9.428279467658E0,15[&rate=3.6961202964240947E-4]:1.807518240058E1)[&rate=8.646812841493725E-4]:9.037013388238E1,(14[&rate=9.343502445768772E-4]:4.240412653074E1,24[&rate=7.595814334579874E-4]:4.240412653074E1)[&rate=7.170707988048164E-4]:6.604118975221E1)[&rate=6.550616048714174E-4]:1.187179528345E1,(((((19[&rate=5.797863698855382E-4]:1.858271625437E1,18[&rate=6.324805892494504E-4]:1.858271625437E1)[&rate=5.113911003979121E-4]:4.762262022446E1,((33[&rate=7.448562005557799E-4]:5.715488214269E1,13[&rate=3.6961202964240947E-4]:5.715488214269E1)[&rate=3.150316056036689E-4]:7.016346723816E0,(11[&rate=3.150316056036689E-4]:1.320680434597E1,29[&rate=8.079298503909151E-4]:1.320680434597E1)[&rate=5.697328379720988E-4]:5.096442452053E1)[&rate=5.797863698855382E-4]:2.034107612316E0)[&rate=3.443690253973973E-4]:5.055766653283E0,((10[&rate=6.10843161705745E-4]:1.744333709227E1,31[&rate=6.10843161705745E-4]:1.744333709227E1)[&rate=3.3038028202607276E-4]:5.281297191601E1,23[&rate=3.6961202964240947E-4]:7.025630900828E1)[&rate=5.402331484372975E-4]:1.004794123825E0)[&rate=4.240910860291703E-4]:2.204756932638E0,((12[&rate=7.595814334579874E-4]:7.034466336577E1,((16[&rate=6.436413708734888E-4]:3.622681810883E1,((22[&rate=8.646812841493725E-4]:2.650637566964E0,21[&rate=0.0012317616243391848]:2.650637566964E0)[&rate=6.436413708734888E-4]:5.17679750346E0,20[&rate=6.215552458284412E-4]:7.827435070424E0)[&rate=8.079298503909151E-4]:2.83993830384E1)[&rate=4.92314656963836E-4]:3.201970986744E1,(((((3[&rate=0.0011640216992238645]:1.540897403184E0,4[&rate=7.039019288807356E-4]:1.540897403184E0)[&rate=3.443690253973973E-4]:1.454052787195E-1,2[&rate=4.4408814012509613E-4]:1.686302681904E0)[&rate=5.30567104509208E-4]:7.217813030105E0,5[&rate=5.797863698855382E-4]:8.904115712009E0)[&rate=4.5388052525423614E-4]:1.994921384792E0,((7[&rate=8.079298503909151E-4]:6.375164652244E0,6[&rate=4.7319774957116796E-4]:6.375164652244E0)[&rate=9.092742325110747E-4]:1.386829049505E0,1[&rate=5.598002113648312E-4]:7.761993701749E0)[&rate=8.646812841493725E-4]:3.137043395052E0)[&rate=6.003236965770491E-4]:5.476110571367E1,((30[&rate=7.448562005557799E-4]:4.760909949603E1,26[&rate=5.899775238406093E-4]:4.760909949603E1)[&rate=7.039019288807356E-4]:6.601395580386E0,32[&rate=5.209584031785439E-4]:5.421049507642E1)[&rate=5.113911003979121E-4]:1.144964773405E1)[&rate=2.5081910834167916E-4]:2.586385165794E0)[&rate=0.001322731229329703]:2.098135389505E0)[&rate=5.697328379720988E-4]:1.069095266801E0,25[&rate=8.646812841493725E-4]:7.141375863257E1)[&rate=4.138143624249966E-4]:2.052101432171E0)[&rate=2.772321517273265E-4]:4.330829107569E0,(17[&rate=8.646812841493725E-4]:6.783995555452E1,(27[&rate=6.911540910611448E-4]:2.917599883033E1,28[&rate=0.001109944039684141]:2.917599883033E1)[&rate=7.910336076493549E-4]:3.866395672418E1)[&rate=5.697328379720988E-4]:9.956733617798E0)[&rate=0.0014620242743406207]:4.252042239409E1); +tree STATE_410000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55143.632012221125,EEF_ucld_branchRates=-266.168517335019,lnP=-55143.632012221125,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.3450431550453E-4]:8.258314649319E0,9[&rate=6.214680616012443E-4]:8.258314649319E0)[&rate=2.634384438069108E-4]:1.050461524619E1,15[&rate=4.2469565133018943E-4]:1.876292989551E1)[&rate=7.361337805654675E-4]:8.878696046397E1,(14[&rate=9.993653188785717E-4]:4.295003008626E1,24[&rate=0.0014359840784256026]:4.295003008626E1)[&rate=8.061902862499419E-4]:6.459986027323E1)[&rate=5.366774599170445E-4]:2.181358422458E1,(((((19[&rate=5.7185514209193E-4]:1.60169395834E1,18[&rate=8.678399548671735E-4]:1.60169395834E1)[&rate=5.138922040248609E-4]:6.010719565451E1,((33[&rate=7.202421753095087E-4]:6.854520675893E1,13[&rate=3.1346649358834856E-4]:6.854520675893E1)[&rate=4.019602196574765E-4]:6.712044594449E0,(11[&rate=2.146851221743464E-4]:1.579646720104E1,29[&rate=4.019602196574765E-4]:1.579646720104E1)[&rate=5.252308513999167E-4]:5.946078415234E1)[&rate=5.7185514209193E-4]:8.668838845273E-1)[&rate=7.875626559126008E-4]:2.33398072144E0,((10[&rate=6.755598086228017E-4]:2.041008230005E1,31[&rate=9.411215151447017E-4]:2.041008230005E1)[&rate=2.634384438069108E-4]:5.718154413152E1,23[&rate=2.9832163130023197E-4]:7.759162643157E1)[&rate=6.478451004529988E-4]:8.664895277749E-1)[&rate=5.7185514209193E-4]:2.500443413937E0,((12[&rate=7.526090178413787E-4]:7.430620253462E1,((16[&rate=2.634384438069108E-4]:3.919839193151E1,((22[&rate=0.001154581498657938]:2.127921498759E0,21[&rate=3.903563284696011E-4]:2.127921498759E0)[&rate=5.02642676322105E-4]:5.981985210097E0,20[&rate=3.539858316110424E-4]:8.109906708856E0)[&rate=0.0017620848949408267]:3.108848522266E1)[&rate=8.061902862499419E-4]:3.418412993235E1,(((((3[&rate=4.8033436846188173E-4]:1.642747501055E0,4[&rate=7.361337805654675E-4]:1.642747501055E0)[&rate=0.0015635153602111614]:2.41454083606E-1,2[&rate=4.1339320618299376E-4]:1.884201584661E0)[&rate=8.907400152723213E-4]:8.633850911122E0,5[&rate=3.4109665009277013E-4]:1.051805249578E1)[&rate=0.0012680723462899863]:1.265207157186E0,((7[&rate=5.7185514209193E-4]:7.542827009574E0,6[&rate=8.678399548671735E-4]:7.542827009574E0)[&rate=6.755598086228017E-4]:7.912505602886E-1,1[&rate=5.02642676322105E-4]:8.334077569863E0)[&rate=0.0012680723462899863]:3.449182083106E0)[&rate=5.7185514209193E-4]:5.905380117969E1,((30[&rate=9.411215151447017E-4]:4.802820828648E1,26[&rate=6.755598086228017E-4]:4.802820828648E1)[&rate=5.599702737247372E-4]:1.027870724747E1,32[&rate=4.6923588314565684E-4]:5.830691553394E1)[&rate=5.7185514209193E-4]:1.253014529871E1)[&rate=8.678399548671735E-4]:2.545461031211E0)[&rate=6.478451004529988E-4]:9.236806707533E-1)[&rate=2.9832163130023197E-4]:5.104273666372E0,25[&rate=8.462116174592041E-4]:7.941047620099E1)[&rate=7.875626559126008E-4]:1.548083172293E0)[&rate=2.8184728886076175E-4]:3.157154829286E0,(17[&rate=0.0011090505018124764]:7.074561146872E1,(27[&rate=3.4109665009277013E-4]:3.531444414733E1,28[&rate=9.690976765639932E-4]:3.531444414733E1)[&rate=6.3450431550453E-4]:3.543116732139E1)[&rate=5.839257110803551E-4]:1.337010273385E1)[&rate=9.411215151447017E-4]:4.52477603815E1); +tree STATE_420000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55118.60609297945,EEF_ucld_branchRates=-266.168517335019,lnP=-55118.60609297945,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.702836706349486E-4]:7.766017936759E0,9[&rate=9.42574319416602E-4]:7.766017936759E0)[&rate=4.574565330226411E-4]:1.047589529876E1,15[&rate=7.178505113085951E-4]:1.824191323551E1)[&rate=9.42574319416602E-4]:9.292655945305E1,(14[&rate=0.0019026097740883763]:4.089268589982E1,24[&rate=0.001261729055599599]:4.089268589982E1)[&rate=6.260015983005512E-4]:7.027578678874E1)[&rate=8.81847953809939E-4]:1.223950600196E1,(((((19[&rate=6.702836706349486E-4]:1.826400099299E1,18[&rate=8.637528559250193E-4]:1.826400099299E1)[&rate=3.6679008165744565E-4]:5.521472340691E1,((33[&rate=7.99082906516808E-4]:6.335526877759E1,13[&rate=4.685984793068316E-4]:6.335526877759E1)[&rate=3.311706315833914E-4]:9.170291722633E0,(11[&rate=4.685984793068316E-4]:1.329210263168E1,29[&rate=6.260015983005512E-4]:1.329210263168E1)[&rate=4.221397053517758E-4]:5.923345786855E1)[&rate=7.433478276723215E-4]:9.531638996779E-1)[&rate=6.368362316820533E-4]:1.01305125651E0,((10[&rate=4.902645364397674E-4]:1.936372673918E1,31[&rate=0.00104630975743972]:1.936372673918E1)[&rate=5.008674010117245E-4]:5.320334988779E1,23[&rate=4.221397053517758E-4]:7.256707662698E1)[&rate=0.0012042007535110933]:1.924699029433E0)[&rate=5.630530981201164E-4]:3.788159201942E0,((12[&rate=8.637528559250193E-4]:7.50285339088E1,((16[&rate=5.424414201517941E-4]:3.625418272311E1,((22[&rate=9.009195238141727E-4]:2.107659457395E0,21[&rate=5.630530981201164E-4]:2.107659457395E0)[&rate=8.142609990746862E-4]:4.153749044658E0,20[&rate=7.178505113085951E-4]:6.261408502053E0)[&rate=0.0013337199938306444]:2.999277422106E1)[&rate=9.009195238141727E-4]:3.668736342227E1,(((((3[&rate=0.0011561956581744002]:1.501000482922E0,4[&rate=7.566306252985693E-4]:1.501000482922E0)[&rate=6.818127522489302E-4]:4.06600030519E-1,2[&rate=3.0881273159755163E-4]:1.907600513441E0)[&rate=5.733848208208148E-4]:8.806900054824E0,5[&rate=4.094709346254871E-4]:1.071450056827E1)[&rate=6.368362316820533E-4]:2.470801608329E0,((7[&rate=6.260015983005512E-4]:7.31001919774E0,6[&rate=7.844533565075344E-4]:7.31001919774E0)[&rate=8.142609990746862E-4]:1.288789520537E0,1[&rate=3.5006635596767803E-4]:8.598808718277E0)[&rate=7.844533565075344E-4]:4.586493458318E0)[&rate=5.321236695768836E-4]:5.706059174716E1,((30[&rate=7.178505113085951E-4]:5.154568364367E1,26[&rate=6.260015983005512E-4]:5.154568364367E1)[&rate=0.001017019856319146]:7.508509642408E0,32[&rate=3.311706315833914E-4]:5.905419328607E1)[&rate=6.589581576616462E-4]:1.119170063768E1)[&rate=5.837576195623846E-4]:2.695652221621E0)[&rate=9.42574319416602E-4]:2.086987763419E0)[&rate=3.5006635596767803E-4]:1.82460914524E0,25[&rate=6.152936938181198E-4]:7.685314305404E1)[&rate=3.0881273159755163E-4]:1.426791804314E0)[&rate=6.260015983005512E-4]:4.724681228912E0,(17[&rate=8.142609990746862E-4]:7.465163244805E1,(27[&rate=3.6679008165744565E-4]:3.042117407202E1,28[&rate=9.655319376331449E-4]:3.042117407202E1)[&rate=7.055715095798063E-4]:4.423045837604E1)[&rate=5.941887179456376E-4]:8.352983639214E0)[&rate=0.0015778930686898426]:4.040336260325E1); +tree STATE_430000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55132.56554577505,EEF_ucld_branchRates=-266.168517335019,lnP=-55132.56554577505,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.675783967164867E-4]:7.716215533621E0,9[&rate=9.123886577236854E-4]:7.716215533621E0)[&rate=3.603254489906682E-4]:9.122886305261E0,15[&rate=3.603254489906682E-4]:1.683910183888E1)[&rate=8.730484076912783E-4]:8.856848731942E1,(14[&rate=0.0016352334253641086]:4.156514949134E1,24[&rate=7.53276959920748E-4]:4.156514949134E1)[&rate=0.001086649562059078]:6.384243966696E1)[&rate=7.409429560971089E-4]:1.989764484523E1,(((((19[&rate=5.509446730885284E-4]:1.670924967727E1,18[&rate=7.409429560971089E-4]:1.670924967727E1)[&rate=3.603254489906682E-4]:5.3968185479E1,((33[&rate=8.730484076912783E-4]:6.046324435436E1,13[&rate=5.238234144533878E-4]:6.046324435436E1)[&rate=5.690109176497302E-4]:8.803799843022E0,(11[&rate=8.730484076912783E-4]:1.408594621153E1,29[&rate=6.438024263972344E-4]:1.408594621153E1)[&rate=6.740024136166709E-4]:5.518109798585E1)[&rate=0.0011904999151805319]:1.410390958891E0)[&rate=3.221368489418206E-4]:2.295949093386E0,((10[&rate=6.8447291357514E-4]:1.663125430118E1,31[&rate=6.056633722328744E-4]:1.663125430118E1)[&rate=6.244858780016771E-4]:5.609161897479E1,23[&rate=6.056633722328744E-4]:7.272287327597E1)[&rate=7.660480398669046E-4]:2.50510973689E-1)[&rate=5.599685609592306E-4]:4.513948954652E0,((12[&rate=8.0751790966958E-4]:7.439841488203E1,((16[&rate=3.603254489906682E-4]:3.576534769494E1,((22[&rate=6.056633722328744E-4]:3.291073720586E0,21[&rate=6.056633722328744E-4]:3.291073720586E0)[&rate=6.438024263972344E-4]:4.624919668553E0,20[&rate=3.221368489418206E-4]:7.915993389139E0)[&rate=0.001086649562059078]:2.78493543058E1)[&rate=9.584132622938017E-4]:3.646012006444E1,(((((3[&rate=8.384934892995796E-4]:1.623197359337E0,4[&rate=7.53276959920748E-4]:1.623197359337E0)[&rate=5.872111470900174E-4]:2.387210683409E-1,2[&rate=8.0751790966958E-4]:1.861918427678E0)[&rate=6.637475978835942E-4]:8.41559286506E0,5[&rate=4.474174150110901E-4]:1.027751129274E1)[&rate=7.660480398669046E-4]:3.049491096798E0,((7[&rate=5.599685609592306E-4]:7.422618433247E0,6[&rate=7.061544003776859E-4]:7.422618433247E0)[&rate=9.584132622938017E-4]:1.928329743687E0,1[&rate=4.675783967164867E-4]:9.350948176934E0)[&rate=6.438024263972344E-4]:3.976054212601E0)[&rate=5.872111470900174E-4]:5.738742434059E1,((30[&rate=6.438024263972344E-4]:4.804423965713E1,26[&rate=5.238234144533878E-4]:4.804423965713E1)[&rate=5.328890010541567E-4]:1.236050070677E1,32[&rate=3.221368489418206E-4]:6.04047403639E1)[&rate=4.8684763797649465E-4]:1.030968636623E1)[&rate=6.740024136166709E-4]:1.511041029261E0)[&rate=4.144922706806995E-4]:2.172947122645E0)[&rate=6.15020794087697E-4]:7.930271437858E-1,25[&rate=5.509446730885284E-4]:7.519144202582E1)[&rate=8.920231076893872E-4]:2.295891178492E0)[&rate=4.259316839451561E-4]:2.621551105984E0,(17[&rate=8.384934892995796E-4]:6.842777126378E1,(27[&rate=4.259316839451561E-4]:3.21637829833E1,28[&rate=0.0010478615957481893]:3.21637829833E1)[&rate=7.061544003776859E-4]:3.626398828048E1)[&rate=3.603254489906682E-4]:1.168111304651E1)[&rate=0.0013834543455660082]:4.519634969324E1); +tree STATE_440000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55131.23852483192,EEF_ucld_branchRates=-266.168517335019,lnP=-55131.23852483192,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=9.497009202809718E-4]:8.35420950403E0,9[&rate=5.747783990648948E-4]:8.35420950403E0)[&rate=3.041531834227713E-4]:7.755708825324E0,15[&rate=2.862227800173435E-4]:1.610991832935E1)[&rate=6.67741229463046E-4]:9.094508348982E1,(14[&rate=0.0015817922294039746]:3.887506792718E1,24[&rate=5.85680558794532E-4]:3.887506792718E1)[&rate=0.001238258664785017]:6.8179933892E1)[&rate=0.0014204971280375202]:2.216356295796E1,(((((19[&rate=8.177080633122408E-4]:1.492507132783E1,18[&rate=3.965672842390939E-4]:1.492507132783E1)[&rate=3.041531834227713E-4]:5.639902898707E1,((33[&rate=9.778635251042926E-4]:6.130227673163E1,13[&rate=3.7335596442346434E-4]:6.130227673163E1)[&rate=6.67741229463046E-4]:9.01925451862E0,(11[&rate=4.913218149791825E-4]:1.356845351003E1,29[&rate=7.358721212702812E-4]:1.356845351003E1)[&rate=9.237868149919757E-4]:5.675307774022E1)[&rate=6.079948411424932E-4]:1.002569064651E0)[&rate=5.533916251533308E-4]:1.876492511232E0,((10[&rate=5.747783990648948E-4]:1.80571806848E1,31[&rate=6.937554827691586E-4]:1.80571806848E1)[&rate=3.041531834227713E-4]:5.472174661937E1,23[&rate=5.220937727208842E-4]:7.277892730417E1)[&rate=2.862227800173435E-4]:4.216655219596E-1)[&rate=6.079948411424932E-4]:2.193218450166E0,((12[&rate=8.997622356969371E-4]:7.17306254337E1,((16[&rate=4.076918058182771E-4]:3.568531079649E1,((22[&rate=0.0010087432656306153]:2.805540459184E0,21[&rate=7.509127806775719E-4]:2.805540459184E0)[&rate=8.563141891399528E-4]:5.102016980066E0,20[&rate=4.1857759733989164E-4]:7.90755743925E0)[&rate=0.001176572167133901]:2.777775335724E1)[&rate=0.0011253105961461693]:3.455552075783E1,(((((3[&rate=4.1857759733989164E-4]:1.697476968949E0,4[&rate=7.358721212702812E-4]:1.697476968949E0)[&rate=5.118013088266772E-4]:1.909868440813E-1,2[&rate=2.862227800173435E-4]:1.88846381303E0)[&rate=2.6513275342943555E-4]:1.002337437877E1,5[&rate=5.220937727208842E-4]:1.19118381918E1)[&rate=6.194465632101085E-4]:1.835309395521E0,((7[&rate=7.665450694696932E-4]:8.460256841047E0,6[&rate=8.77346106360987E-4]:8.460256841047E0)[&rate=4.913218149791825E-4]:1.937620722814E0,1[&rate=7.509127806775719E-4]:1.039787756386E1)[&rate=4.7085787469359553E-4]:3.349270023462E0)[&rate=2.6513275342943555E-4]:5.39983913233E1,((30[&rate=8.77346106360987E-4]:4.819966111759E1,26[&rate=6.079948411424932E-4]:4.819966111759E1)[&rate=5.747783990648948E-4]:1.103267069303E1,32[&rate=3.611043221159824E-4]:5.923233181062E1)[&rate=5.220937727208842E-4]:8.513207100001E0)[&rate=5.640213576418618E-4]:2.495292643695E0)[&rate=0.0013158292808572833]:1.489793879377E0)[&rate=8.997622356969371E-4]:2.20069384293E0,25[&rate=6.552443783689777E-4]:7.393131927663E1)[&rate=6.43047321854709E-4]:1.462491999669E0)[&rate=5.85680558794532E-4]:4.086962763127E0,(17[&rate=6.937554827691586E-4]:7.049578675303E1,(27[&rate=5.85680558794532E-4]:3.341567452438E1,28[&rate=8.177080633122408E-4]:3.341567452438E1)[&rate=7.358721212702812E-4]:3.708011222865E1)[&rate=4.398155718679091E-4]:8.984987286396E0)[&rate=5.324448979609076E-4]:4.973779073771E1); +tree STATE_450000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55141.74410102451,EEF_ucld_branchRates=-266.168517335019,lnP=-55141.74410102451,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.356665178991711E-4]:9.358818855806E0,9[&rate=9.371930643066711E-4]:9.358818855806E0)[&rate=6.490312780582868E-4]:7.689108097548E0,15[&rate=3.4138084021587047E-4]:1.704792695335E1)[&rate=8.24013566862896E-4]:9.301918447524E1,(14[&rate=0.0016438102712117032]:4.000449740889E1,24[&rate=7.92551283196223E-4]:4.000449740889E1)[&rate=9.844272090225616E-4]:7.00626140197E1)[&rate=0.0016438102712117032]:1.927112369065E1,(((((19[&rate=6.606888871500762E-4]:1.290107039683E1,18[&rate=9.157637277535048E-4]:1.290107039683E1)[&rate=3.221687940775971E-4]:5.682811364326E1,((33[&rate=7.492503389155882E-4]:5.823550130871E1,13[&rate=4.852170045554186E-4]:5.823550130871E1)[&rate=6.26234744749037E-4]:8.801060692914E0,(11[&rate=4.39624538165241E-4]:1.462243545847E1,29[&rate=6.72546703150656E-4]:1.462243545847E1)[&rate=5.713935331101842E-4]:5.241412654315E1)[&rate=5.606503229281215E-4]:2.692622038465E0)[&rate=4.150606443594714E-4]:2.87641505255E0,((10[&rate=5.070317018108015E-4]:1.970582770422E1,31[&rate=6.375531368841945E-4]:1.970582770422E1)[&rate=4.6285539498507473E-4]:5.125343330263E1,23[&rate=4.6285539498507473E-4]:7.095926100685E1)[&rate=3.4138084021587047E-4]:1.64633808579E0)[&rate=0.0011881779261406137]:2.121986564692E0,((12[&rate=6.040021151566944E-4]:7.025928627055E1,((((((2[&rate=5.606503229281215E-4]:1.611430553682E0,4[&rate=0.001301608293482671]:1.611430553682E0)[&rate=3.4138084021587047E-4]:4.694628307608E-1,3[&rate=5.606503229281215E-4]:2.080893384442E0)[&rate=9.371930643066711E-4]:9.075857708091E0,5[&rate=8.24013566862896E-4]:1.115675109253E1)[&rate=9.371930643066711E-4]:2.108984246792E0,((7[&rate=4.275464525610453E-4]:9.021026965348E0,6[&rate=5.606503229281215E-4]:9.021026965348E0)[&rate=7.095488338628193E-4]:9.421214562891E-1,1[&rate=6.375531368841945E-4]:9.963148421637E0)[&rate=6.040021151566944E-4]:3.302586917689E0)[&rate=7.224436160492642E-4]:5.01003377985E1,((30[&rate=7.92551283196223E-4]:4.661437994832E1,26[&rate=7.224436160492642E-4]:4.661437994832E1)[&rate=8.24013566862896E-4]:7.589186490092E0,32[&rate=3.5842261137811643E-4]:5.420356643841E1)[&rate=2.9949889209623855E-4]:9.162506699409E0)[&rate=5.499400480126014E-4]:3.12984579376E0,(16[&rate=6.26234744749037E-4]:3.549006788617E1,((22[&rate=8.763636105477012E-4]:2.539191548752E0,21[&rate=3.4138084021587047E-4]:2.539191548752E0)[&rate=0.0010392885502835878]:4.090128719387E0,20[&rate=7.492503389155882E-4]:6.629320268139E0)[&rate=0.001301608293482671]:2.886074761803E1)[&rate=9.844272090225616E-4]:3.100585104541E1)[&rate=6.375531368841945E-4]:3.763367338968E0)[&rate=4.020665516747072E-4]:2.130085416126E0,25[&rate=8.079864968315195E-4]:7.238937168667E1)[&rate=6.26234744749037E-4]:2.33821397066E0)[&rate=8.581191865692422E-4]:3.289408417908E0,(17[&rate=9.844272090225616E-4]:6.752842137203E1,(27[&rate=3.221687940775971E-4]:2.817956702578E1,28[&rate=0.0010392885502835878]:2.817956702578E1)[&rate=6.606888871500762E-4]:3.934885434625E1)[&rate=5.499400480126014E-4]:1.048857270321E1)[&rate=0.0013792277248119674]:5.132124104401E1); +tree STATE_460000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55172.21295651247,EEF_ucld_branchRates=-266.168517335019,lnP=-55172.21295651247,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=9.271224101017265E-4]:9.352570959879E0,9[&rate=9.271224101017265E-4]:9.352570959879E0)[&rate=6.450020163745986E-4]:9.936459006433E0,15[&rate=3.6822404989636086E-4]:1.928902996631E1)[&rate=6.658086898361787E-4]:9.076166660221E1,(14[&rate=0.0014297590236987106]:4.048846613894E1,24[&rate=6.874561115022176E-4]:4.048846613894E1)[&rate=7.729124466177874E-4]:6.956223042959E1)[&rate=7.729124466177874E-4]:1.609055424942E1,(((((19[&rate=8.667922149149875E-4]:1.561581828607E1,18[&rate=4.624054131165222E-4]:1.561581828607E1)[&rate=3.3485956248172023E-4]:5.408621706996E1,((33[&rate=7.868369283394077E-4]:6.085882857746E1,13[&rate=4.308519119605803E-4]:6.085882857746E1)[&rate=3.824183409733474E-4]:7.607424437697E0,(11[&rate=8.855605853172021E-4]:1.43586412707E1,29[&rate=6.052891236735073E-4]:1.43586412707E1)[&rate=5.861114937020625E-4]:5.410761174446E1)[&rate=3.3485956248172023E-4]:1.235782340868E0)[&rate=5.578428606794646E-4]:2.810064979796E0,((10[&rate=5.956569465918394E-4]:2.198880005278E1,31[&rate=3.525888235228774E-4]:2.198880005278E1)[&rate=4.8225162449849616E-4]:5.006311339886E1,23[&rate=5.391488465731279E-4]:7.205191345164E1)[&rate=8.164999493292892E-4]:4.601868841804E-1)[&rate=6.248760483246475E-4]:2.062447011043E0,((((((((3[&rate=7.1013074086253E-4]:1.859245708198E0,4[&rate=8.667922149149875E-4]:1.859245708198E0)[&rate=9.055975137880129E-4]:1.918242642446E-1,2[&rate=5.484912789538494E-4]:2.051069972443E0)[&rate=5.484912789538494E-4]:1.113403898696E1,5[&rate=6.248760483246475E-4]:1.31851089594E1)[&rate=4.724177273944153E-4]:1.409939679194E0,((7[&rate=4.308519119605803E-4]:9.521102571869E0,1[&rate=3.525888235228774E-4]:9.521102571869E0)[&rate=6.150235263436769E-4]:1.201436746074E0,6[&rate=4.308519119605803E-4]:1.072253931794E1)[&rate=7.340561960308048E-4]:3.872509320649E0)[&rate=5.391488465731279E-4]:5.58287245357E1,((30[&rate=7.729124466177874E-4]:4.70886275887E1,26[&rate=6.248760483246475E-4]:4.70886275887E1)[&rate=7.595082710387821E-4]:1.315441781373E1,32[&rate=5.484912789538494E-4]:6.024304540243E1)[&rate=3.9556115504693054E-4]:1.018072777186E1)[&rate=6.348631444517705E-4]:1.681073125214E0,(16[&rate=3.525888235228774E-4]:3.25966467444E1,((22[&rate=6.348631444517705E-4]:2.563407500915E0,21[&rate=5.766374904372438E-4]:2.563407500915E0)[&rate=7.340561960308048E-4]:4.300230118893E0,20[&rate=9.055975137880129E-4]:6.863637619808E0)[&rate=0.0014297590236987106]:2.573300912459E1)[&rate=7.729124466177874E-4]:3.950819955511E1)[&rate=0.0011613754633567979]:3.459351370303E-1,12[&rate=0.0010707854839050444]:7.245078143653E1)[&rate=9.055975137880129E-4]:1.441133703484E0,25[&rate=6.874561115022176E-4]:7.389191514002E1)[&rate=6.052891236735073E-4]:6.826322068503E-1)[&rate=5.110024582027937E-4]:1.76392894495E0,(17[&rate=8.667922149149875E-4]:6.849451531241E1,(27[&rate=3.525888235228774E-4]:2.635767101866E1,28[&rate=0.0011613754633567979]:2.635767101866E1)[&rate=5.484912789538494E-4]:4.213684429375E1)[&rate=6.986520699446728E-4]:7.843960979407E0)[&rate=0.0013049768415146414]:4.980277452613E1); +tree STATE_470000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55129.85051269936,EEF_ucld_branchRates=-266.168517335019,lnP=-55129.85051269936,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.831069000887972E-4]:8.857526633439E0,9[&rate=5.831069000887972E-4]:8.857526633439E0)[&rate=5.61296373222668E-4]:1.05753497525E1,15[&rate=6.171274468613201E-4]:1.943287638594E1)[&rate=9.508680678779239E-4]:9.388769327502E1,(14[&rate=0.0012436190370526637]:4.440389195239E1,24[&rate=9.246240068461771E-4]:4.440389195239E1)[&rate=5.721273735855916E-4]:6.891667770857E1)[&rate=5.942535853744004E-4]:1.581667137429E1,(((((19[&rate=9.246240068461771E-4]:1.364684247716E1,18[&rate=6.787633037474138E-4]:1.364684247716E1)[&rate=3.446446421856704E-4]:6.016364031494E1,((33[&rate=7.6557351688551E-4]:6.550582934212E1,13[&rate=5.087523609164967E-4]:6.550582934212E1)[&rate=7.6557351688551E-4]:7.415448328991E0,(11[&rate=5.087523609164967E-4]:1.622073446054E1,29[&rate=4.984446106278553E-4]:1.622073446054E1)[&rate=6.171274468613201E-4]:5.670054321058E1)[&rate=5.400085045641492E-4]:8.892051209891E-1)[&rate=5.087523609164967E-4]:9.035408599892E-1,((10[&rate=4.984446106278553E-4]:2.335805628592E1,31[&rate=5.721273735855916E-4]:2.335805628592E1)[&rate=3.815854573572185E-4]:5.11537008575E1,23[&rate=3.3104494244700744E-4]:7.451175714341E1)[&rate=6.787633037474138E-4]:2.022665086789E-1)[&rate=3.164574877295202E-4]:2.026732466817E0,((((((((2[&rate=7.6557351688551E-4]:1.514836644617E0,4[&rate=5.191039263983667E-4]:1.514836644617E0)[&rate=5.942535853744004E-4]:5.43555021304E-1,3[&rate=7.199412053510433E-4]:2.05839166592E0)[&rate=7.820346454653307E-4]:9.533527719616E0,5[&rate=2.825975163863213E-4]:1.159191938554E1)[&rate=2.825975163863213E-4]:2.012159463151E0,((7[&rate=3.164574877295202E-4]:8.518559930173E0,6[&rate=3.815854573572185E-4]:8.518559930173E0)[&rate=4.3642396944949363E-4]:9.300808137241E-1,1[&rate=4.572744107575711E-4]:9.448640743897E0)[&rate=5.191039263983667E-4]:4.155438104791E0)[&rate=6.658234834619924E-4]:5.602948563919E1,((30[&rate=7.497810157942033E-4]:5.05536576803E1,26[&rate=9.246240068461771E-4]:5.05536576803E1)[&rate=2.825975163863213E-4]:9.603622378609E0,32[&rate=4.041905722829379E-4]:6.01572800589E1)[&rate=7.199412053510433E-4]:9.47628442897E0)[&rate=3.0051349757351237E-4]:1.356305077776E0,(16[&rate=2.825975163863213E-4]:3.131686178029E1,((22[&rate=9.003011877323465E-4]:2.239547467547E0,21[&rate=6.409190260255669E-4]:2.239547467547E0)[&rate=7.6557351688551E-4]:4.57960153249E0,20[&rate=6.055869146226487E-4]:6.819149000038E0)[&rate=0.0015931785892018295]:2.449771278025E1)[&rate=0.0011809621227642604]:3.967300778536E1)[&rate=6.920711494633574E-4]:2.103705051208E0,12[&rate=8.776136057232608E-4]:7.309357461686E1)[&rate=8.776136057232608E-4]:2.245998047346E0,25[&rate=8.776136057232608E-4]:7.533957266421E1)[&rate=5.400085045641492E-4]:1.401183454705E0)[&rate=0.0015931785892018295]:2.927977075225E0,(17[&rate=9.246240068461771E-4]:6.698220401637E1,(27[&rate=3.815854573572185E-4]:2.792392381292E1,28[&rate=0.0013224613975828582]:2.792392381292E1)[&rate=8.172867269230016E-4]:3.905828020345E1)[&rate=4.3642396944949363E-4]:1.268652917777E1)[&rate=0.0011289231719150156]:4.946850784111E1); +tree STATE_480000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.914370011546,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.914370011546,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.169568193307634E-4]:8.372529988105E0,9[&rate=0.0014739122751421686]:8.372529988105E0)[&rate=3.9746581492093244E-4]:5.817046041588E0,15[&rate=8.465102470977224E-4]:1.418957602969E1)[&rate=7.318147631226881E-4]:1.040547473783E2,(14[&rate=0.0013648741130866953]:4.557739326636E1,24[&rate=9.568106013214324E-4]:4.557739326636E1)[&rate=9.318250748032188E-4]:7.266693014165E1)[&rate=9.568106013214324E-4]:1.016782874463E1,((((((11[&rate=4.432032765313757E-4]:1.440111193681E1,29[&rate=6.776996088540745E-4]:1.440111193681E1)[&rate=9.085148342792043E-4]:5.550681984982E1,(33[&rate=8.102622485029824E-4]:5.944103964888E1,13[&rate=3.592584978167305E-4]:5.944103964888E1)[&rate=3.592584978167305E-4]:1.046689213775E1)[&rate=5.829868288814346E-4]:4.483787989122E-1,(19[&rate=5.610369780197227E-4]:1.263558667933E1,18[&rate=3.1357417570760976E-4]:1.263558667933E1)[&rate=3.9746581492093244E-4]:5.772072390622E1)[&rate=6.054691968941107E-4]:2.495116630966E0,((10[&rate=6.286351582698724E-4]:2.219689682806E1,31[&rate=6.906789851538717E-4]:2.219689682806E1)[&rate=2.950138386164316E-4]:5.016247913746E1,23[&rate=5.610369780197227E-4]:7.235937596552E1)[&rate=2.950138386164316E-4]:4.920512509916E-1)[&rate=7.93331958008951E-4]:1.711461734751E0,((((((((2[&rate=5.181618606672871E-4]:1.308994715584E0,4[&rate=6.286351582698724E-4]:1.308994715584E0)[&rate=5.181618606672871E-4]:6.883416728773E-1,3[&rate=4.541346030949311E-4]:1.997336388461E0)[&rate=6.286351582698724E-4]:1.098344546353E1,5[&rate=2.950138386164316E-4]:1.298078185199E1)[&rate=7.040014754861956E-4]:1.217006424821E0,((7[&rate=5.075514067786489E-4]:7.398584057796E0,6[&rate=5.502167647066148E-4]:7.398584057796E0)[&rate=9.568106013214324E-4]:7.865829715772E-1,1[&rate=5.181618606672871E-4]:8.185167029373E0)[&rate=3.4518505815063076E-4]:6.01262124744E0)[&rate=4.7566671840112984E-4]:5.539370364202E1,((30[&rate=7.77086817642972E-4]:4.526176575487E1,26[&rate=8.866462687181158E-4]:4.526176575487E1)[&rate=4.0930207351182207E-4]:1.522130371032E1,32[&rate=6.526498106734282E-4]:6.048306946519E1)[&rate=3.300846881294519E-4]:9.108422453643E0)[&rate=5.94152255762339E-4]:1.728260874181E0,(16[&rate=7.177009129614771E-4]:2.899900048487E1,((22[&rate=7.318147631226881E-4]:2.973538397876E0,21[&rate=9.837642596703655E-4]:2.973538397876E0)[&rate=5.181618606672871E-4]:3.549796863057E0,20[&rate=2.950138386164316E-4]:6.523335260933E0)[&rate=0.0020171530986357903]:2.247566522393E1)[&rate=7.040014754861956E-4]:4.232075230814E1)[&rate=0.0012840877295500182]:1.725635517845E0,12[&rate=7.93331958008951E-4]:7.304538831086E1)[&rate=9.568106013214324E-4]:5.611388186391E-1,25[&rate=7.77086817642972E-4]:7.36065271295E1)[&rate=5.287971788245851E-4]:9.563618217666E-1)[&rate=5.829868288814346E-4]:3.422281440172E0,(17[&rate=7.77086817642972E-4]:6.75731370728E1,(27[&rate=3.8524874575651983E-4]:2.592041204357E1,28[&rate=0.0011664953097540887]:2.592041204357E1)[&rate=6.054691968941107E-4]:4.165272502923E1)[&rate=9.568106013214324E-4]:1.041203331864E1)[&rate=0.0011664953097540887]:5.042698176121E1); +tree STATE_490000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55155.93474866327,EEF_ucld_branchRates=-266.168517335019,lnP=-55155.93474866327,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.738783585425204E-4]:8.953348987544E0,9[&rate=5.738783585425204E-4]:8.953348987544E0)[&rate=5.833232100258033E-4]:4.628197293152E0,15[&rate=8.163274316075615E-4]:1.35815462807E1)[&rate=9.268269896525155E-4]:9.696867499497E1,(14[&rate=0.001252507899030874]:4.569195658087E1,24[&rate=8.911874862056788E-4]:4.569195658087E1)[&rate=0.001252507899030874]:6.48582646948E1)[&rate=7.209139023860103E-4]:1.775505992232E1,((((((11[&rate=7.102613227698447E-4]:1.533210058101E1,29[&rate=6.89528764385002E-4]:1.533210058101E1)[&rate=9.673522923378275E-4]:5.204855066688E1,(33[&rate=9.463797408122218E-4]:6.012112462893E1,13[&rate=4.086891665091361E-4]:6.012112462893E1)[&rate=7.429001169445255E-4]:7.259526618958E0)[&rate=6.595778644643788E-4]:3.674315123154E0,(19[&rate=6.210835245676399E-4]:1.106281130699E1,18[&rate=7.209139023860103E-4]:1.106281130699E1)[&rate=3.7402769822582273E-4]:5.999215506405E1)[&rate=8.031099027646373E-4]:1.783117070498E0,((10[&rate=7.209139023860103E-4]:2.452415812599E1,31[&rate=4.7319978406610256E-4]:2.452415812599E1)[&rate=3.924735386749528E-4]:4.804229119514E1,23[&rate=4.6168626994628115E-4]:7.256644932114E1)[&rate=7.659620564160644E-4]:2.716341204052E-1)[&rate=4.369316938426715E-4]:1.835642376994E0,(((12[&rate=9.084852835796438E-4]:7.012829537962E1,(16[&rate=5.452406450120793E-4]:2.99632243119E1,((22[&rate=5.738783585425204E-4]:3.029034381201E0,21[&rate=3.924735386749528E-4]:3.029034381201E0)[&rate=6.794098675521023E-4]:5.797389894347E0,20[&rate=6.305997748539341E-4]:8.826424275549E0)[&rate=0.0017046291919733097]:2.113680003635E1)[&rate=6.498316164158772E-4]:4.016507106772E1)[&rate=0.0011065312516184188]:2.218226092095E0,(((30[&rate=8.44311256568681E-4]:5.129076152831E1,26[&rate=8.747976134175786E-4]:5.129076152831E1)[&rate=5.256723795334569E-4]:8.787729334758E0,32[&rate=4.6168626994628115E-4]:6.007849086306E1)[&rate=7.659620564160644E-4]:8.603260117153E0,((((2[&rate=6.595778644643788E-4]:1.381978753235E0,4[&rate=6.89528764385002E-4]:1.381978753235E0)[&rate=3.924735386749528E-4]:7.325429107491E-1,3[&rate=8.300417915664263E-4]:2.114521663984E0)[&rate=6.794098675521023E-4]:1.08641509198E1,5[&rate=6.116133854934825E-4]:1.297867258379E1)[&rate=0.0014491807514400747]:1.075823810525E0,((7[&rate=3.924735386749528E-4]:7.572215851104E0,6[&rate=9.673522923378275E-4]:7.572215851104E0)[&rate=6.498316164158772E-4]:1.125458066347E0,1[&rate=4.369316938426715E-4]:8.697673917451E0)[&rate=4.7319978406610256E-4]:5.356822476859E0)[&rate=5.927493270212426E-4]:5.462725458591E1)[&rate=5.548577528008723E-4]:3.664770491496E0)[&rate=5.156634399605105E-4]:1.138120731786E0,25[&rate=8.163274316075615E-4]:7.34846422035E1)[&rate=9.268269896525155E-4]:1.189083615037E0)[&rate=8.911874862056788E-4]:3.697850497496E0,(17[&rate=7.429001169445255E-4]:6.920182089604E1,(27[&rate=4.369316938426715E-4]:2.950625555608E1,28[&rate=0.001072187376393127]:2.950625555608E1)[&rate=6.305997748539341E-4]:3.969556533996E1)[&rate=8.031099027646373E-4]:9.169755419995E0)[&rate=9.673522923378275E-4]:4.993370488195E1); +tree STATE_500000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55107.35917739688,EEF_ucld_branchRates=-266.168517335019,lnP=-55107.35917739688,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.6328681318850806E-4]:7.037908305019E0,9[&rate=0.001022621298963064]:7.037908305019E0)[&rate=5.736908916324828E-4]:7.82515801133E0,15[&rate=8.130680899881627E-4]:1.486306631635E1)[&rate=6.472775283774323E-4]:1.024756685154E2,(14[&rate=0.0012262482926472839]:4.802142733855E1,24[&rate=0.0011304672654216122]:4.802142733855E1)[&rate=9.153814911174858E-4]:6.931730749323E1)[&rate=8.130680899881627E-4]:9.912200890514E0,((((((11[&rate=4.6004008759219467E-4]:1.575135656893E1,29[&rate=8.130680899881627E-4]:1.575135656893E1)[&rate=6.344787703327652E-4]:5.576495284682E1,(33[&rate=6.095886268283535E-4]:6.17276036326E1,13[&rate=3.892329103079943E-4]:6.17276036326E1)[&rate=9.651775643465473E-4]:9.788705783159E0)[&rate=4.713551410956128E-4]:1.882446084747E0,(19[&rate=5.163660902789979E-4]:1.222921924193E1,18[&rate=6.873921761771372E-4]:1.222921924193E1)[&rate=3.349108436940948E-4]:6.116953625857E1)[&rate=7.307194630935513E-4]:2.295941491516E0,((10[&rate=8.509449924223776E-4]:2.475678626739E1,31[&rate=3.4948370132999325E-4]:2.475678626739E1)[&rate=2.832883363629269E-4]:5.04327894102E1,23[&rate=3.764942181289855E-4]:7.51895756776E1)[&rate=7.953346627526376E-4]:5.051213144232E-1)[&rate=5.051038840731333E-4]:1.480576485982E0,(((12[&rate=9.39464670943951E-4]:6.968505903155E1,(16[&rate=3.0232301829886043E-4]:2.887283934615E1,((22[&rate=4.37146667640306E-4]:3.595429929462E0,21[&rate=5.276699363803478E-4]:3.595429929462E0)[&rate=3.349108436940948E-4]:7.310834312707E0,20[&rate=3.0232301829886043E-4]:1.090626424217E1)[&rate=0.0021983391513666554]:1.796657510399E1)[&rate=7.307194630935513E-4]:4.08122196854E1)[&rate=5.974520288446137E-4]:3.610315712085E0,(((30[&rate=6.873921761771372E-4]:5.406900942868E1,26[&rate=5.163660902789979E-4]:5.406900942868E1)[&rate=8.927131816238545E-4]:1.008497505164E1,32[&rate=3.892329103079943E-4]:6.415398448032E1)[&rate=0.0010551108074185625]:7.230351510321E0,((((3[&rate=4.938627351790708E-4]:2.146383702824E0,4[&rate=0.0021983391513666554]:2.146383702824E0)[&rate=4.938627351790708E-4]:2.008745968894E-1,2[&rate=3.892329103079943E-4]:2.347258299713E0)[&rate=7.307194630935513E-4]:1.045301467183E1,5[&rate=5.620267024642896E-4]:1.280027297154E1)[&rate=9.39464670943951E-4]:1.889183022287E0,((7[&rate=9.39464670943951E-4]:7.26328192382E0,6[&rate=8.315748911892168E-4]:7.26328192382E0)[&rate=0.001022621298963064]:1.172211448925E0,1[&rate=2.832883363629269E-4]:8.435493372744E0)[&rate=5.736908916324828E-4]:6.253962621087E0)[&rate=5.051038840731333E-4]:5.669487999681E1)[&rate=6.344787703327652E-4]:1.911038752991E0)[&rate=6.737065492932566E-4]:2.811333384125E0,25[&rate=6.219235522669571E-4]:7.610670812776E1)[&rate=9.92785462503284E-4]:1.068565350239E0)[&rate=6.344787703327652E-4]:2.414906453872E0,(17[&rate=7.158625947508273E-4]:7.145768926061E1,(27[&rate=3.193181122533896E-4]:2.766814910734E1,28[&rate=0.0013584273290860184]:2.766814910734E1)[&rate=6.873921761771372E-4]:4.378954015328E1)[&rate=5.974520288446137E-4]:8.132490671258E0)[&rate=0.0013584273290860184]:4.766075579042E1); +tree STATE_510000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55122.91785715205,EEF_ucld_branchRates=-266.168517335019,lnP=-55122.91785715205,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.819063373764553E-4]:7.219155725971E0,9[&rate=6.447294992380995E-4]:7.219155725971E0)[&rate=5.316694532771518E-4]:7.936067120479E0,15[&rate=6.339258689845561E-4]:1.515522284645E1)[&rate=7.951458797679311E-4]:1.010510236881E2,(14[&rate=0.0010506666716233544]:4.623896006336E1,24[&rate=8.104218973180484E-4]:4.623896006336E1)[&rate=8.984735304570814E-4]:6.996728647119E1)[&rate=7.951458797679311E-4]:8.559980055519E0,((((((11[&rate=6.447294992380995E-4]:1.685143388376E1,29[&rate=4.1470210622306764E-4]:1.685143388376E1)[&rate=5.516845186364787E-4]:5.513237884549E1,(33[&rate=7.393622334858929E-4]:6.585302930364E1,13[&rate=5.921010725116191E-4]:6.585302930364E1)[&rate=3.7562971810817497E-4]:6.13078342561E0)[&rate=0.0018436481570566117]:4.653142831044E-1,(19[&rate=9.192218399457012E-4]:1.16249994531E1,18[&rate=5.819063373764553E-4]:1.16249994531E1)[&rate=4.0236812167898097E-4]:6.082412755926E1)[&rate=8.984735304570814E-4]:4.245011990519E0,((10[&rate=8.104218973180484E-4]:2.373128722887E1,31[&rate=7.139908958085867E-4]:2.373128722887E1)[&rate=5.11590176579403E-4]:5.043797072976E1,23[&rate=7.264996925068737E-4]:7.416925795863E1)[&rate=6.232789353989847E-4]:2.524881044244E0)[&rate=5.216477696010311E-4]:1.664862740564E0,((((((30[&rate=4.2653517253419984E-4]:5.334733094411E1,26[&rate=7.01803194106337E-4]:5.334733094411E1)[&rate=8.430230119347522E-4]:1.062201687731E1,32[&rate=3.4448511045198594E-4]:6.396934782142E1)[&rate=5.316694532771518E-4]:7.87688523126E0,((((3[&rate=6.232789353989847E-4]:2.073415316704E0,4[&rate=9.911369621877996E-4]:2.073415316704E0)[&rate=6.127706540875029E-4]:5.15570359696E-1,2[&rate=5.216477696010311E-4]:2.5889856764E0)[&rate=6.127706540875029E-4]:7.614776935695E0,5[&rate=4.2653517253419984E-4]:1.02037626121E1)[&rate=5.014747749311925E-4]:2.134545318628E0,((7[&rate=3.2605528358823184E-4]:6.671107277535E0,1[&rate=9.414044565772993E-4]:6.671107277535E0)[&rate=3.607889214718687E-4]:1.110419015574E0,6[&rate=3.607889214718687E-4]:7.781526293109E0)[&rate=8.789605793576082E-4]:4.556781637615E0)[&rate=5.416754124152334E-4]:5.950792512196E1)[&rate=5.617146611712093E-4]:1.271964854416E0,12[&rate=7.804577528945022E-4]:7.31181979071E1)[&rate=3.7562971810817497E-4]:1.359662132476E0,(16[&rate=5.014747749311925E-4]:3.169019094015E1,((22[&rate=6.89907018803526E-4]:3.167315204395E0,21[&rate=6.89907018803526E-4]:3.167315204395E0)[&rate=3.607889214718687E-4]:6.7096209608E0,20[&rate=3.607889214718687E-4]:9.876936165195E0)[&rate=0.0018436481570566117]:2.181325477495E1)[&rate=9.414044565772993E-4]:4.278766909942E1)[&rate=0.0010506666716233544]:2.839997608138E0,25[&rate=6.55708751765478E-4]:7.731785764771E1)[&rate=7.951458797679311E-4]:1.041144095731E0)[&rate=4.2653517253419984E-4]:3.419617367249E0,(17[&rate=9.414044565772993E-4]:7.368476250588E1,(27[&rate=6.89907018803526E-4]:2.625153680078E1,28[&rate=0.0012272076857461711]:2.625153680078E1)[&rate=9.192218399457012E-4]:4.74332257051E1)[&rate=6.89907018803526E-4]:8.093856604807E0)[&rate=0.0012272076857461711]:4.298760747938E1); +tree STATE_520000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55147.072449068786,EEF_ucld_branchRates=-266.168517335019,lnP=-55147.072449068786,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.652620321432614E-4]:7.592704581392E0,9[&rate=7.771326936980999E-4]:7.592704581392E0)[&rate=5.035459306776246E-4]:8.608973856204E0,15[&rate=6.317183248213777E-4]:1.62016784376E1)[&rate=7.216480158710325E-4]:9.870433820885E1,(14[&rate=9.370837054172511E-4]:5.288266548308E1,24[&rate=7.927336427475211E-4]:5.288266548308E1)[&rate=8.654936115848181E-4]:6.202335116336E1)[&rate=7.346375929791303E-4]:1.282338558147E1,((((((33[&rate=8.0922084995333E-4]:6.46890875665E1,13[&rate=3.1287583172408625E-4]:6.46890875665E1)[&rate=3.440216584793952E-4]:8.288914550639E0,(11[&rate=4.0247847560685767E-4]:1.728590908053E1,29[&rate=8.45416720369157E-4]:1.728590908053E1)[&rate=4.7728033337744773E-4]:5.569209303661E1)[&rate=9.370837054172511E-4]:4.78206423631E-1,(19[&rate=8.45416720369157E-4]:1.464858328285E1,18[&rate=4.7728033337744773E-4]:1.464858328285E1)[&rate=4.125811897985043E-4]:5.880762525792E1)[&rate=5.652620321432614E-4]:3.220442681975E0,((10[&rate=6.740787280132809E-4]:2.364061538933E1,31[&rate=5.835376218883927E-4]:2.364061538933E1)[&rate=3.695390785618332E-4]:5.154929985531E1,23[&rate=4.8607148265119205E-4]:7.518991524465E1)[&rate=3.81061352327827E-4]:1.486735978102E0)[&rate=3.440216584793952E-4]:2.130862840308E0,((((16[&rate=5.652620321432614E-4]:3.423425326195E1,((22[&rate=3.572713085587252E-4]:2.693479030599E0,21[&rate=7.216480158710325E-4]:2.693479030599E0)[&rate=5.928558951560467E-4]:5.950936372554E0,20[&rate=6.630789720936844E-4]:8.644415403153E0)[&rate=0.001334218393912119]:2.55898378588E1)[&rate=8.267273288938588E-4]:3.952964166015E1,(((30[&rate=8.654936115848181E-4]:5.213252237947E1,26[&rate=3.920016275581878E-4]:5.213252237947E1)[&rate=0.001334218393912119]:1.168957951452E1,32[&rate=5.385276853270761E-4]:6.3822101894E1)[&rate=3.440216584793952E-4]:6.487822228984E0,((((2[&rate=6.317183248213777E-4]:1.7721667106E0,4[&rate=8.0922084995333E-4]:1.7721667106E0)[&rate=4.948207106197941E-4]:7.6184676245E-1,3[&rate=4.0247847560685767E-4]:2.53401347305E0)[&rate=6.217282611317319E-4]:9.055895588666E0,5[&rate=4.8607148265119205E-4]:1.158990906172E1)[&rate=6.317183248213777E-4]:5.846941619641E-1,((7[&rate=5.385276853270761E-4]:6.620574002694E0,6[&rate=4.8607148265119205E-4]:6.620574002694E0)[&rate=6.217282611317319E-4]:7.367999930045E-1,1[&rate=3.294264563509383E-4]:7.357373995699E0)[&rate=3.1287583172408625E-4]:4.817229227981E0)[&rate=5.209901184827933E-4]:5.81353208993E1)[&rate=4.7728033337744773E-4]:3.453970799125E0)[&rate=5.835376218883927E-4]:4.133117257013E-1,12[&rate=5.652620321432614E-4]:7.417720664781E1)[&rate=7.346375929791303E-4]:2.976062460298E0,25[&rate=6.523700486150057E-4]:7.715326910811E1)[&rate=8.0922084995333E-4]:1.654244954949E0)[&rate=5.385276853270761E-4]:5.545642514559E0,(17[&rate=7.216480158710325E-4]:7.446874723466E1,(27[&rate=4.5949216514289327E-4]:2.515508450857E1,28[&rate=0.001083963892840059]:2.515508450857E1)[&rate=6.523700486150057E-4]:4.931366272609E1)[&rate=7.091436198285539E-4]:9.884409342952E0)[&rate=0.001083963892840059]:4.33762456503E1); +tree STATE_530000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55117.26040828159,EEF_ucld_branchRates=-266.168517335019,lnP=-55117.26040828159,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.257177588764174E-4]:9.231085824981E0,9[&rate=5.205810642982964E-4]:9.231085824981E0)[&rate=5.103241416379793E-4]:9.200446272761E0,15[&rate=3.470563957593068E-4]:1.843153209774E1)[&rate=6.836142549244299E-4]:9.794741777937E1,(14[&rate=0.0015739964167323143]:5.308306381436E1,24[&rate=5.826133124813159E-4]:5.308306381436E1)[&rate=0.001248464051275422]:6.329588606275E1)[&rate=8.806419981079513E-4]:1.165388213658E1,((((((33[&rate=6.147323829414381E-4]:6.56916420269E1,13[&rate=4.2504601801741736E-4]:6.56916420269E1)[&rate=3.3067320363416684E-4]:1.13099326392E1,(11[&rate=4.014660004519184E-4]:1.693100290228E1,29[&rate=4.1345294768868753E-4]:1.693100290228E1)[&rate=7.215763734906812E-4]:6.007057176382E1)[&rate=9.228683476942878E-4]:1.872656053973E0,(19[&rate=5.826133124813159E-4]:1.648272451658E1,18[&rate=6.147323829414381E-4]:1.648272451658E1)[&rate=3.3067320363416684E-4]:6.239150620349E1)[&rate=7.930246329912181E-4]:1.254895424997E0,((10[&rate=9.01096544718218E-4]:1.995016566889E1,31[&rate=5.721273902861035E-4]:1.995016566889E1)[&rate=3.889882658390005E-4]:5.954938703198E1,23[&rate=5.000395224533744E-4]:7.949955270087E1)[&rate=9.01096544718218E-4]:6.295734441969E-1)[&rate=5.721273902861035E-4]:1.610835999084E0,((12[&rate=7.930246329912181E-4]:7.483152743982E1,((((((2[&rate=9.712680273607862E-4]:1.663172405658E0,4[&rate=7.77712355019981E-4]:1.663172405658E0)[&rate=0.0010613009278490758]:3.34831895977E-1,3[&rate=6.597760757160658E-4]:1.998004301635E0)[&rate=9.712680273607862E-4]:7.250443307231E0,5[&rate=6.836142549244299E-4]:9.248447608866E0)[&rate=6.959457638028567E-4]:1.768034095583E0,((7[&rate=8.256019552851012E-4]:7.836307398347E0,6[&rate=5.513839136884972E-4]:7.836307398347E0)[&rate=7.215763734906812E-4]:6.315949507437E-1,1[&rate=5.308307175430273E-4]:8.46790234909E0)[&rate=3.758914150749859E-4]:2.548579355358E0)[&rate=5.000395224533744E-4]:6.11067726071E1,((30[&rate=6.257177588764174E-4]:5.167297943878E1,26[&rate=5.000395224533744E-4]:5.167297943878E1)[&rate=3.758914150749859E-4]:1.290973213381E1,32[&rate=6.257177588764174E-4]:6.45827115726E1)[&rate=6.715663903729346E-4]:7.540542738952E0)[&rate=8.089635072569146E-4]:1.561796792262E0,(16[&rate=4.897051117762453E-4]:3.445976023518E1,((22[&rate=0.0010613009278490758]:2.799213825833E0,21[&rate=3.121963918908909E-4]:2.799213825833E0)[&rate=6.836142549244299E-4]:7.12966344086E0,20[&rate=9.01096544718218E-4]:9.928877266693E0)[&rate=0.0014216835675038805]:2.453088296849E1)[&rate=8.806419981079513E-4]:3.922529086863E1)[&rate=9.461700683135753E-4]:1.146476336014E0)[&rate=5.103241416379793E-4]:4.491027915718E0,25[&rate=5.205810642982964E-4]:7.932255535554E1)[&rate=4.2504601801741736E-4]:2.41740678861E0)[&rate=3.6199896071503984E-4]:3.602570394817E0,(17[&rate=7.349412974087319E-4]:8.038213159E1,(27[&rate=6.257177588764174E-4]:2.374572205479E1,28[&rate=9.01096544718218E-4]:2.374572205479E1)[&rate=8.089635072569146E-4]:5.663640953521E1)[&rate=3.121963918908909E-4]:4.960400948968E0)[&rate=0.001248464051275422]:4.269029947472E1); +tree STATE_540000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.6839498887,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.6839498887,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.601078162538218E-4]:6.024983097303E0,9[&rate=0.0017223085679575778]:6.024983097303E0)[&rate=4.7434356281737176E-4]:1.112680314533E1,15[&rate=2.8473967076380946E-4]:1.715178624263E1)[&rate=9.811302136960125E-4]:9.201265634906E1,(14[&rate=8.588552835648221E-4]:4.962179823954E1,24[&rate=9.537194013706145E-4]:4.962179823954E1)[&rate=6.67828743374552E-4]:5.954264435215E1)[&rate=6.977304756559134E-4]:1.487606946161E1,((((((33[&rate=6.977304756559134E-4]:5.685482104423E1,13[&rate=4.0090188443587307E-4]:5.685482104423E1)[&rate=2.6523567399526114E-4]:1.509104815267E1,(11[&rate=5.728033379507144E-4]:1.622947790846E1,29[&rate=6.825870306815722E-4]:1.622947790846E1)[&rate=6.977304756559134E-4]:5.571639128844E1)[&rate=6.977304756559134E-4]:1.068230333946E0,(19[&rate=4.985049607393941E-4]:1.48329176442E1,18[&rate=3.479332917861423E-4]:1.48329176442E1)[&rate=2.4255676595157476E-4]:5.818118188666E1)[&rate=7.458521093466837E-4]:1.517386571796E0,((10[&rate=9.537194013706145E-4]:2.199842159625E1,31[&rate=0.001076260650735581]:2.199842159625E1)[&rate=3.335341874018493E-4]:5.134778103831E1,23[&rate=4.7434356281737176E-4]:7.334620263457E1)[&rate=5.351541093882894E-4]:1.185283468081E0)[&rate=7.629369793467786E-4]:2.104485025559E0,((12[&rate=8.807067892588217E-4]:7.31101640712E1,((((((2[&rate=9.811302136960125E-4]:2.556417784157E0,4[&rate=0.0012006830219375873]:2.556417784157E0)[&rate=4.7434356281737176E-4]:5.070189822278E-1,3[&rate=5.106451001902365E-4]:3.063436766385E0)[&rate=7.629369793467786E-4]:6.469092797542E0,5[&rate=4.6227499184916344E-4]:9.532529563928E0)[&rate=8.380209408445003E-4]:1.979542491016E0,((7[&rate=2.6523567399526114E-4]:6.826199770219E0,6[&rate=9.811302136960125E-4]:6.826199770219E0)[&rate=5.728033379507144E-4]:2.799789780145E-1,1[&rate=4.0090188443587307E-4]:7.106178748234E0)[&rate=9.811302136960125E-4]:4.40589330671E0)[&rate=3.335341874018493E-4]:5.737894220641E1,((30[&rate=5.987377802607197E-4]:5.129560647601E1,26[&rate=5.601078162538218E-4]:5.129560647601E1)[&rate=6.255459956747897E-4]:9.681373336002E0,32[&rate=2.8473967076380946E-4]:6.097697981201E1)[&rate=5.106451001902365E-4]:7.91403444935E0)[&rate=4.7434356281737176E-4]:1.562541100997E0,(16[&rate=4.8641209317651883E-4]:3.170511200346E1,((22[&rate=0.001154799286743911]:3.174676404585E0,21[&rate=6.534224722715123E-4]:3.174676404585E0)[&rate=0.0014671562803098333]:4.445351181411E0,20[&rate=3.751335617973711E-4]:7.620027585996E0)[&rate=0.0014671562803098333]:2.408508441746E1)[&rate=0.001076260650735581]:3.87484433589E1)[&rate=0.001076260650735581]:2.656608708848E0)[&rate=5.987377802607197E-4]:2.13047242779E0,25[&rate=6.120209986957139E-4]:7.524063649899E1)[&rate=3.022488681398337E-4]:1.395334629213E0)[&rate=8.588552835648221E-4]:5.473609309463E0,(17[&rate=9.811302136960125E-4]:7.426912913977E1,(27[&rate=3.6175775393176173E-4]:2.445134170254E1,28[&rate=8.588552835648221E-4]:2.445134170254E1)[&rate=6.120209986957139E-4]:4.981778743723E1)[&rate=8.588552835648221E-4]:7.840451297897E0)[&rate=0.0017223085679575778]:4.193093161563E1); +tree STATE_550000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55134.77175171959,EEF_ucld_branchRates=-266.168517335019,lnP=-55134.77175171959,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.856276334827377E-4]:7.101964646792E0,9[&rate=0.0010892467460903038]:7.101964646792E0)[&rate=6.184205661440152E-4]:9.777972318652E0,15[&rate=5.067286770661846E-4]:1.687993696544E1)[&rate=7.514793879777766E-4]:8.541852406936E1,(14[&rate=9.355233524877536E-4]:4.22569845519E1,24[&rate=0.0011287621723145727]:4.22569845519E1)[&rate=9.619064956551843E-4]:6.004147648291E1)[&rate=5.672027967754349E-4]:2.107394674675E1,((((((33[&rate=8.441046814677798E-4]:5.767766451718E1,13[&rate=4.94902037098036E-4]:5.767766451718E1)[&rate=2.6641252686239664E-4]:1.208787238519E1,(11[&rate=3.477257137209998E-4]:1.37268121835E1,29[&rate=3.8714013623857994E-4]:1.37268121835E1)[&rate=9.355233524877536E-4]:5.603872471887E1)[&rate=4.713485650191293E-4]:1.158124551021E0,(19[&rate=4.5957539994609804E-4]:1.507932716258E1,18[&rate=6.59422766606158E-4]:1.507932716258E1)[&rate=3.187214802097336E-4]:5.584433429081E1)[&rate=3.8714013623857994E-4]:1.850931149357E0,((10[&rate=8.441046814677798E-4]:1.998244341081E1,31[&rate=5.923978617622986E-4]:1.998244341081E1)[&rate=2.6641252686239664E-4]:5.263803002329E1,23[&rate=8.441046814677798E-4]:7.26204734341E1)[&rate=4.5957539994609804E-4]:1.541191686458E-1)[&rate=5.305890491180718E-4]:1.760892740707E0,((12[&rate=9.355233524877536E-4]:7.225110405804E1,((((30[&rate=8.240026714055555E-4]:4.992030256652E1,26[&rate=9.619064956551843E-4]:4.992030256652E1)[&rate=3.9961304694940443E-4]:5.681050629534E0,32[&rate=3.335961073340522E-4]:5.560135319605E1)[&rate=6.184205661440152E-4]:1.136369708713E1,((((2[&rate=6.88389724162212E-4]:2.407088130004E0,4[&rate=6.88389724162212E-4]:2.407088130004E0)[&rate=0.0016710642870678466]:7.427362759659E-1,3[&rate=8.873421003401454E-4]:3.14982440597E0)[&rate=0.0015307110572299178]:6.171497873536E0,5[&rate=4.713485650191293E-4]:9.321322279506E0)[&rate=9.107351186919553E-4]:3.064884335624E0,((7[&rate=6.737226223755058E-4]:6.69124804804E0,6[&rate=0.0010204887046755136]:6.69124804804E0)[&rate=5.923978617622986E-4]:1.32787970332E0,1[&rate=2.856276334827377E-4]:8.01912775136E0)[&rate=5.923978617622986E-4]:4.36707886377E0)[&rate=5.067286770661846E-4]:5.457884366806E1)[&rate=7.514793879777766E-4]:1.907344663352E0,(16[&rate=2.856276334827377E-4]:3.34485455509E1,((22[&rate=5.548615741116706E-4]:3.399338140458E0,21[&rate=2.856276334827377E-4]:3.399338140458E0)[&rate=9.355233524877536E-4]:4.464434729426E0,20[&rate=7.685808844541103E-4]:7.863772869884E0)[&rate=0.0015307110572299178]:2.558477268101E1)[&rate=0.0010892467460903038]:3.542384939564E1)[&rate=0.0011727651552971856]:3.378709111502E0)[&rate=4.5957539994609804E-4]:1.678847256863E0,25[&rate=6.88389724162212E-4]:7.39299513149E1)[&rate=6.454583495636735E-4]:6.055340285553E-1)[&rate=5.426637206247535E-4]:4.870131547916E0,(17[&rate=5.672027967754349E-4]:7.070003816619E1,(27[&rate=4.8311614614401243E-4]:2.527447139008E1,28[&rate=8.441046814677798E-4]:2.527447139008E1)[&rate=6.737226223755058E-4]:4.542556677611E1)[&rate=3.612812429890535E-4]:8.705578725184E0)[&rate=0.0015307110572299178]:4.396679089018E1); +tree STATE_560000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55123.693666954845,EEF_ucld_branchRates=-266.168517335019,lnP=-55123.693666954845,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.227791069818815E-4]:9.344138102472E0,9[&rate=9.713426626699263E-4]:9.344138102472E0)[&rate=3.705506199848558E-4]:6.68098265132E0,15[&rate=6.401824521520237E-4]:1.602512075379E1)[&rate=5.702043875699311E-4]:9.82268921562E1,(14[&rate=9.020233380184819E-4]:4.655854286069E1,24[&rate=0.0010261025341100532]:4.655854286069E1)[&rate=9.237378175942788E-4]:6.76934700493E1)[&rate=9.976809714778885E-4]:1.228602915188E1,((((((33[&rate=0.0011284904831191593]:5.962846412641E1,13[&rate=6.162615419543988E-4]:5.962846412641E1)[&rate=7.039457819598852E-4]:1.231267656479E1,(11[&rate=5.144165190909185E-4]:1.426645391723E1,29[&rate=9.020233380184819E-4]:1.426645391723E1)[&rate=7.761227772678859E-4]:5.767468677397E1)[&rate=0.0010570036208299692]:2.304791909244E0,(19[&rate=6.162615419543988E-4]:1.465885870828E1,18[&rate=7.039457819598852E-4]:1.465885870828E1)[&rate=5.589511424597178E-4]:5.958707389217E1)[&rate=4.809351318956731E-4]:2.300999559744E0,((10[&rate=5.255177895379145E-4]:2.050649718258E1,31[&rate=9.020233380184819E-4]:2.050649718258E1)[&rate=3.229421388008123E-4]:5.549429475905E1,23[&rate=4.104193254345321E-4]:7.600079194163E1)[&rate=5.589511424597178E-4]:5.461402185572E-1)[&rate=3.036214840896357E-4]:1.753808985389E0,((12[&rate=9.237378175942788E-4]:7.483510827687E1,((((((2[&rate=5.702043875699311E-4]:2.061165105219E0,4[&rate=6.77642305852951E-4]:2.061165105219E0)[&rate=6.649150422098425E-4]:1.151059737129E0,3[&rate=4.921496506210746E-4]:3.212224842348E0)[&rate=3.229421388008123E-4]:6.708748794196E0,5[&rate=3.036214840896357E-4]:9.920973636544E0)[&rate=6.906434415868436E-4]:2.746411146727E0,((7[&rate=8.433141179243915E-4]:7.988113509819E0,6[&rate=6.281312279548298E-4]:7.988113509819E0)[&rate=4.227791069818815E-4]:1.006643047556E0,1[&rate=2.809200337149651E-4]:8.994756557375E0)[&rate=7.608056382934968E-4]:3.672628225897E0)[&rate=6.281312279548298E-4]:5.695373924866E1,((30[&rate=6.906434415868436E-4]:4.989492981499E1,26[&rate=8.254995771396156E-4]:4.989492981499E1)[&rate=9.237378175942788E-4]:1.165168597377E1,32[&rate=4.921496506210746E-4]:6.154661578876E1)[&rate=5.477650579115066E-4]:8.074508243173E0)[&rate=3.229421388008123E-4]:1.8419131996E0,(16[&rate=5.929868456047867E-4]:3.567328467472E1,((22[&rate=7.608056382934968E-4]:3.504663281535E0,21[&rate=8.433141179243915E-4]:3.504663281535E0)[&rate=5.366271390097779E-4]:3.826654970895E0,20[&rate=8.433141179243915E-4]:7.33131825243E0)[&rate=0.001428801108536912]:2.834196642229E1)[&rate=0.0010570036208299692]:3.578975255681E1)[&rate=0.001428801108536912]:3.37207104534E0)[&rate=5.033015993787605E-4]:2.134698765557E0,25[&rate=7.039457819598852E-4]:7.696980704243E1)[&rate=3.705506199848558E-4]:1.330934103148E0)[&rate=8.619378789544156E-4]:3.945330185474E0,(17[&rate=8.254995771396156E-4]:7.690958863828E1,(27[&rate=4.348230801678755E-4]:2.77454426535E1,28[&rate=0.0015442640644243387]:2.77454426535E1)[&rate=5.033015993787605E-4]:4.916414598479E1)[&rate=3.705506199848558E-4]:5.336482692767E0)[&rate=0.0015442640644243387]:4.429197073082E1); +tree STATE_570000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55121.59887290825,EEF_ucld_branchRates=-266.168517335019,lnP=-55121.59887290825,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.371923547322015E-4]:7.414524421527E0,9[&rate=8.403806945302895E-4]:7.414524421527E0)[&rate=4.208266589297074E-4]:9.188213459865E0,15[&rate=3.8735368654105947E-4]:1.660273788139E1)[&rate=9.514474344142586E-4]:9.901670902308E1,(14[&rate=8.403806945302895E-4]:5.004723836038E1,24[&rate=8.653641601291619E-4]:5.004723836038E1)[&rate=9.849366034619745E-4]:6.557220854409E1)[&rate=5.509149184181908E-4]:1.129395089836E1,((((((11[&rate=4.433138184618361E-4]:1.578264850021E1,29[&rate=3.8735368654105947E-4]:1.578264850021E1)[&rate=0.00102159174674798]:5.577273150515E1,(19[&rate=5.90879914922077E-4]:1.548754620737E1,18[&rate=6.048720037069035E-4]:1.548754620737E1)[&rate=4.546723755750391E-4]:5.606783379799E1)[&rate=0.00110733521720897]:1.964894723073E0,(33[&rate=7.534616781467328E-4]:6.405317280906E1,13[&rate=2.809641605015249E-4]:6.405317280906E1)[&rate=2.198393149102446E-4]:9.46710191937E0)[&rate=6.048720037069035E-4]:1.855439619252E0,((10[&rate=4.7771815469699536E-4]:1.794031394323E1,31[&rate=5.134018543915878E-4]:1.794031394323E1)[&rate=2.809641605015249E-4]:5.694675288483E1,23[&rate=4.208266589297074E-4]:7.488706682806E1)[&rate=1.3516397213390443E-4]:4.886475196282E-1)[&rate=2.198393149102446E-4]:2.64994313141E0,((12[&rate=8.920212659354561E-4]:7.339493810264E1,((((((2[&rate=0.00102159174674798]:2.009442206673E0,4[&rate=6.192515080056104E-4]:2.009442206673E0)[&rate=3.5359681459045213E-4]:5.334942926921E-1,3[&rate=7.534616781467328E-4]:2.542936499365E0)[&rate=5.256742307703744E-4]:7.022107245113E0,5[&rate=3.305030587553051E-4]:9.565043744478E0)[&rate=3.985071409374576E-4]:3.542652780996E0,((7[&rate=5.256742307703744E-4]:7.797448138878E0,6[&rate=0.0014807386033619504]:7.797448138878E0)[&rate=5.256742307703744E-4]:1.042530590272E0,1[&rate=2.371923547322015E-4]:8.83997872915E0)[&rate=8.403806945302895E-4]:4.267717796324E0)[&rate=4.7771815469699536E-4]:5.873203209131E1,((30[&rate=7.159541190786925E-4]:4.890464250274E1,26[&rate=6.814155102200703E-4]:4.890464250274E1)[&rate=5.256742307703744E-4]:1.338069957709E1,32[&rate=4.7771815469699536E-4]:6.228534207983E1)[&rate=3.1864446943750426E-4]:9.554386536958E0)[&rate=4.6613400167904687E-4]:9.349092781761E-1,(16[&rate=4.096568779026747E-4]:3.502475153512E1,((22[&rate=8.403806945302895E-4]:2.435269342414E0,21[&rate=2.371923547322015E-4]:2.435269342414E0)[&rate=7.735359754825262E-4]:4.087976660926E0,20[&rate=5.90879914922077E-4]:6.52324600334E0)[&rate=0.0014807386033619504]:2.850150553178E1)[&rate=7.735359754825262E-4]:3.774988635984E1)[&rate=0.0016294541796487792]:6.20300207679E-1)[&rate=6.983497426741701E-4]:3.474229787908E0,25[&rate=6.192515080056104E-4]:7.686916789055E1)[&rate=4.3203864186553803E-4]:1.156489588544E0)[&rate=2.809641605015249E-4]:1.585755053677E0,(17[&rate=9.206094248933696E-4]:7.296784163355E1,(27[&rate=3.305030587553051E-4]:2.847322691728E1,28[&rate=7.735359754825262E-4]:2.847322691728E1)[&rate=6.048720037069035E-4]:4.449461471627E1)[&rate=7.735359754825262E-4]:6.64357089922E0)[&rate=0.0016294541796487792]:4.730198527006E1); +tree STATE_580000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55122.90919330829,EEF_ucld_branchRates=-266.168517335019,lnP=-55122.90919330829,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.073182348482795E-4]:1.005158598945E1,9[&rate=0.0011249668632427373]:1.005158598945E1)[&rate=7.859927683339262E-4]:9.407881716792E0,15[&rate=5.49717060950495E-4]:1.945946770624E1)[&rate=8.007043620768064E-4]:9.49997633783E1,(14[&rate=0.0010721448433929203]:4.565064779511E1,24[&rate=6.289022541132086E-4]:4.565064779511E1)[&rate=7.335075544429201E-4]:6.880858328944E1)[&rate=5.840330871149024E-4]:1.448409062713E1,((((((11[&rate=5.582204578543717E-4]:1.243298583834E1,29[&rate=4.725430669764968E-4]:1.243298583834E1)[&rate=6.382887586018736E-4]:5.921100571394E1,(33[&rate=7.101777216282804E-4]:6.398546412751E1,13[&rate=5.840330871149024E-4]:6.398546412751E1)[&rate=8.007043620768064E-4]:7.658527424772E0)[&rate=5.243140660909321E-4]:1.006481993832E0,(19[&rate=8.690667150912635E-4]:1.422169598114E1,18[&rate=7.859927683339262E-4]:1.422169598114E1)[&rate=2.907323940303518E-4]:5.842877756498E1)[&rate=5.49717060950495E-4]:1.626029579354E0,((10[&rate=7.335075544429201E-4]:1.793742145853E1,31[&rate=6.382887586018736E-4]:1.793742145853E1)[&rate=3.928420236667655E-4]:5.488675538875E1,23[&rate=5.243140660909321E-4]:7.282417684728E1)[&rate=8.690667150912635E-4]:1.452326278187E0)[&rate=5.840330871149024E-4]:3.142138246732E0,((12[&rate=9.115605735636263E-4]:7.633541680362E1,((((((2[&rate=4.987524671733476E-4]:1.844154290281E0,4[&rate=3.928420236667655E-4]:1.844154290281E0)[&rate=6.19674948795309E-4]:6.744708974818E-1,3[&rate=4.353719782692402E-4]:2.518625187763E0)[&rate=5.412410807690452E-4]:7.256019307263E0,5[&rate=4.150764150736097E-4]:9.774644495026E0)[&rate=7.335075544429201E-4]:2.676404296606E0,((7[&rate=6.016313227096871E-4]:8.456928615723E0,6[&rate=3.928420236667655E-4]:8.456928615723E0)[&rate=4.543895942923255E-4]:9.069536474169E-1,1[&rate=6.382887586018736E-4]:9.36388226314E0)[&rate=3.3633639119518856E-4]:3.087166528492E0)[&rate=6.382887586018736E-4]:5.892796224113E1,((30[&rate=7.21642464826822E-4]:5.365837463484E1,26[&rate=7.458184409838716E-4]:5.365837463484E1)[&rate=8.326935734224053E-4]:1.036134673426E1,32[&rate=3.5290688317806817E-4]:6.401972136909E1)[&rate=3.5290688317806817E-4]:7.359289663672E0)[&rate=6.382887586018736E-4]:3.006959028485E0,(16[&rate=5.840330871149024E-4]:3.543332251284E1,((22[&rate=7.458184409838716E-4]:2.554781394637E0,21[&rate=5.243140660909321E-4]:2.554781394637E0)[&rate=5.412410807690452E-4]:3.843562594508E0,20[&rate=4.353719782692402E-4]:6.398343989144E0)[&rate=0.0013014280581259644]:2.903497852369E1)[&rate=6.882946189499975E-4]:3.895264754841E1)[&rate=7.719951617584359E-4]:1.949446742367E0)[&rate=4.901161480538242E-4]:5.057841559761E-3,25[&rate=7.101777216282804E-4]:7.634047464518E1)[&rate=9.631538180808008E-4]:1.078166727027E0)[&rate=3.3633639119518856E-4]:4.221021074444E0,(17[&rate=8.162306258340493E-4]:7.513378468005E1,(27[&rate=4.725430669764968E-4]:3.105433862766E1,28[&rate=8.502431685431218E-4]:3.105433862766E1)[&rate=5.927838927102842E-4]:4.407944605239E1)[&rate=3.3633639119518856E-4]:6.505877766595E0)[&rate=0.0011952255661917912]:4.730365926503E1); +tree STATE_590000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55148.89900056519,EEF_ucld_branchRates=-266.168517335019,lnP=-55148.89900056519,RHOD_ucld_branchRates=-266.168517335019] = [&R] 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+tree STATE_600000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55148.824978126184,EEF_ucld_branchRates=-266.168517335019,lnP=-55148.824978126184,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.973979920217328E-4]:9.415685509962E0,9[&rate=5.246415580661787E-4]:9.415685509962E0)[&rate=6.793175993071832E-4]:4.226605532773E0,15[&rate=3.3484310469936916E-4]:1.364229104274E1)[&rate=6.407065003852507E-4]:1.055493271249E2,(14[&rate=0.0015882413403219033]:3.849840645773E1,24[&rate=9.080273226494311E-4]:3.849840645773E1)[&rate=8.222328177814041E-4]:8.06932117099E1)[&rate=4.880504666632778E-4]:8.32043258342E0,((((((11[&rate=6.793175993071832E-4]:1.106168195151E1,29[&rate=5.775680655021668E-4]:1.106168195151E1)[&rate=6.596850113428341E-4]:5.526019751036E1,(33[&rate=5.952588127494935E-4]:5.674804587241E1,13[&rate=5.511949881136266E-4]:5.674804587241E1)[&rate=7.679725927898979E-4]:9.57383358946E0)[&rate=4.263296455363363E-4]:1.484413699655E0,(19[&rate=4.880504666632778E-4]:1.685088077651E1,18[&rate=5.423864743030337E-4]:1.685088077651E1)[&rate=7.438387966609007E-4]:5.095541238501E1)[&rate=7.556998085018953E-4]:3.406130846942E0,((10[&rate=8.885964251143254E-4]:2.014593220171E1,31[&rate=7.939476782968262E-4]:2.014593220171E1)[&rate=3.5549349399876075E-4]:4.951067870665E1,23[&rate=5.156664372168541E-4]:6.965661090836E1)[&rate=2.6226363487066076E-4]:1.555813100102E0)[&rate=6.314194498928822E-4]:2.041678358407E0,((12[&rate=8.374339133771018E-4]:6.938947630495E1,((((30[&rate=7.556998085018953E-4]:4.56460878375E1,26[&rate=6.131711402582346E-4]:4.56460878375E1)[&rate=0.0011173534039416592]:7.402023444973E0,32[&rate=6.041801811417088E-4]:5.304811128247E1)[&rate=4.263296455363363E-4]:1.185421600796E1,((((3[&rate=6.407065003852507E-4]:2.036401913423E0,4[&rate=6.694103820964997E-4]:2.036401913423E0)[&rate=8.704758743610079E-4]:2.551939419551E-1,2[&rate=3.3484310469936916E-4]:2.291595855378E0)[&rate=8.374339133771018E-4]:7.056880239249E0,5[&rate=4.144344339062653E-4]:9.348476094627E0)[&rate=6.222460214317763E-4]:1.63922155518E0,((7[&rate=4.587284287319711E-4]:7.052477068832E0,1[&rate=3.727897955071885E-4]:7.052477068832E0)[&rate=3.3484310469936916E-4]:1.234509625451E0,6[&rate=5.599841643572704E-4]:8.286986694284E0)[&rate=7.679725927898979E-4]:2.700710955523E0)[&rate=5.599841643572704E-4]:5.391462964062E1)[&rate=8.077662552808429E-4]:9.269471153273E-1,(16[&rate=4.3759795047140077E-4]:3.132457949844E1,((22[&rate=6.694103820964997E-4]:1.601593538146E0,21[&rate=5.863928436510923E-4]:1.601593538146E0)[&rate=7.323485452406963E-4]:3.65616428939E0,20[&rate=8.53473104559196E-4]:5.257757827536E0)[&rate=0.0012439794671556719]:2.60668216709E1)[&rate=9.518736239874024E-4]:3.450469490732E1)[&rate=8.222328177814041E-4]:3.560201899194E0)[&rate=0.001005075623274302]:7.535685100299E-1,25[&rate=7.438387966609007E-4]:7.014304481498E1)[&rate=5.065936775530302E-4]:3.111057551891E0)[&rate=6.131711402582346E-4]:2.417125640812E0,(17[&rate=7.807039415098549E-4]:6.615309471264E1,(27[&rate=4.587284287319711E-4]:2.167704190426E1,28[&rate=8.885964251143254E-4]:2.167704190426E1)[&rate=5.599841643572704E-4]:4.447605280838E1)[&rate=6.407065003852507E-4]:9.518133295039E0)[&rate=0.001353112988866289]:5.184082274336E1); +tree STATE_610000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55156.057422954385,EEF_ucld_branchRates=-266.168517335019,lnP=-55156.057422954385,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.576843095529489E-4]:6.391530262002E0,9[&rate=8.560175426265173E-4]:6.391530262002E0)[&rate=8.317512794920563E-4]:7.644471854183E0,15[&rate=6.243684738623953E-4]:1.403600211618E1)[&rate=0.0011012929157995187]:1.060915498226E2,(14[&rate=0.0012888582522911187]:4.163007361528E1,24[&rate=7.229709701203369E-4]:4.163007361528E1)[&rate=7.783593935982723E-4]:7.849747832349E1)[&rate=5.576843095529489E-4]:6.175061700534E0,((((((11[&rate=6.974049256254913E-4]:1.105691885067E1,29[&rate=6.726868293867452E-4]:1.105691885067E1)[&rate=9.123788226885621E-4]:5.707971465408E1,(33[&rate=7.229709701203369E-4]:5.797792732191E1,13[&rate=5.098683281976282E-4]:5.797792732191E1)[&rate=7.317493917421152E-4]:1.015870618284E1)[&rate=6.974049256254913E-4]:1.518358369406E0,(19[&rate=5.750328161807866E-4]:1.512263026574E1,18[&rate=6.808546934529762E-4]:1.512263026574E1)[&rate=3.348175668690189E-4]:5.453236160841E1)[&rate=6.404298771412137E-4]:2.596036819732E0,((10[&rate=4.7528429563831735E-4]:2.236344201681E1,31[&rate=5.750328161807866E-4]:2.236344201681E1)[&rate=4.2985599320881704E-4]:4.930229482633E1,23[&rate=7.058140258977987E-4]:7.166573684313E1)[&rate=9.46334106094458E-4]:5.85291850753E-1)[&rate=8.203364467540117E-4]:2.628926603417E0,(25[&rate=6.645731922417099E-4]:7.353806930876E1,(12[&rate=8.970663548606376E-4]:7.215081778944E1,((((((4[&rate=6.808546934529762E-4]:1.822344746663E0,3[&rate=6.243684738623953E-4]:1.822344746663E0)[&rate=6.243684738623953E-4]:2.661344103313E-1,2[&rate=6.243684738623953E-4]:2.088479156994E0)[&rate=7.883776949717793E-4]:8.027164285042E0,5[&rate=4.092342578202177E-4]:1.011564344204E1)[&rate=8.689970372179339E-4]:1.5370409664E0,((7[&rate=7.986903297253645E-4]:6.977589804019E0,6[&rate=6.726868293867452E-4]:6.977589804019E0)[&rate=4.469639014061275E-4]:5.352652299159E-1,1[&rate=8.436253985490835E-4]:7.512855033935E0)[&rate=5.487199197356518E-4]:4.139829374501E0)[&rate=4.990575840395089E-4]:5.737322960977E1,((30[&rate=8.203364467540117E-4]:4.679732142644E1,26[&rate=8.093306160906909E-4]:4.679732142644E1)[&rate=8.970663548606376E-4]:1.422778084001E1,32[&rate=4.990575840395089E-4]:6.102510226645E1)[&rate=3.348175668690189E-4]:8.000811751757E0)[&rate=5.201526343250597E-4]:1.063049743311E0,(16[&rate=5.098683281976282E-4]:3.326359147358E1,((22[&rate=8.560175426265173E-4]:1.866797941675E0,21[&rate=6.082040743921694E-4]:1.866797941675E0)[&rate=4.092342578202177E-4]:3.697800926292E0,20[&rate=6.163066709546145E-4]:5.564598867967E0)[&rate=0.0012888582522911187]:2.769899260561E1)[&rate=7.883776949717793E-4]:3.682537228794E1)[&rate=7.317493917421152E-4]:2.06185402792E0)[&rate=7.883776949717793E-4]:1.387251519316E0)[&rate=6.082040743921694E-4]:1.341885988548E0)[&rate=7.229709701203369E-4]:5.002012253336E0,(17[&rate=9.287367906704824E-4]:6.760126738002E1,(27[&rate=8.317512794920563E-4]:2.135725998395E1,28[&rate=9.863354329822463E-4]:2.135725998395E1)[&rate=9.46334106094458E-4]:4.624400739607E1)[&rate=6.484575591028283E-4]:1.228070017062E1)[&rate=0.0012888582522911187]:4.642064608867E1); +tree STATE_620000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.842583902144,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.842583902144,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.057994878985228E-4]:9.10361116194E0,9[&rate=0.0010424528456968011]:9.10361116194E0)[&rate=0.0010424528456968011]:5.119046874131E0,15[&rate=3.7904033844692834E-4]:1.422265803607E1)[&rate=5.847207632301741E-4]:1.043469768724E2,(14[&rate=0.0017279256676925368]:3.787151842215E1,24[&rate=8.251767367575257E-4]:3.787151842215E1)[&rate=8.440429891114695E-4]:8.06981164863E1)[&rate=7.572336556107255E-4]:7.663960925248E0,((((((11[&rate=3.6598208577750673E-4]:1.26764614591E1,29[&rate=6.710968886686014E-4]:1.26764614591E1)[&rate=8.638438053249303E-4]:5.264726533724E1,(33[&rate=9.067479597193599E-4]:5.98003116024E1,13[&rate=5.503743148394561E-4]:5.98003116024E1)[&rate=0.0010424528456968011]:5.523415193946E0)[&rate=1.9050007481450802E-4]:2.153202945903E0,(19[&rate=5.964440272884674E-4]:1.204374287044E1,18[&rate=6.204195038933246E-4]:1.204374287044E1)[&rate=4.614600807562417E-4]:5.543318687181E1)[&rate=5.391373400762985E-4]:2.548028465356E0,((10[&rate=6.327134971755614E-4]:2.337563359002E1,31[&rate=4.614600807562417E-4]:2.337563359002E1)[&rate=5.279752491228346E-4]:4.655908370695E1,23[&rate=3.6598208577750673E-4]:6.993471729697E1)[&rate=9.067479597193599E-4]:9.024091063412E-2)[&rate=7.898574768707827E-4]:4.40571436825E0,(25[&rate=7.732425707085323E-4]:7.309744588032E1,(12[&rate=9.551504293079359E-4]:7.208774547491E1,((((30[&rate=6.710968886686014E-4]:5.061699057169E1,26[&rate=7.898574768707827E-4]:5.061699057169E1)[&rate=5.617048052860102E-4]:1.040751738649E1,32[&rate=3.523255829059693E-4]:6.102450795818E1)[&rate=8.251767367575257E-4]:7.884278767669E0,((((4[&rate=4.389047345182469E-4]:1.926455715636E0,2[&rate=4.038389541781942E-4]:1.926455715636E0)[&rate=6.710968886686014E-4]:2.120841400077E-1,3[&rate=7.898574768707827E-4]:2.138539855643E0)[&rate=8.440429891114695E-4]:7.111541026008E0,5[&rate=2.86688685273389E-4]:9.250080881652E0)[&rate=5.168691198817464E-4]:2.126787155534E0,((7[&rate=2.3626765117008632E-4]:6.745897304939E0,6[&rate=9.067479597193599E-4]:6.745897304939E0)[&rate=6.204195038933246E-4]:5.80680016704E-1,1[&rate=5.168691198817464E-4]:7.326577321643E0)[&rate=9.551504293079359E-4]:4.050290715542E0)[&rate=6.327134971755614E-4]:5.753191868866E1)[&rate=4.038389541781942E-4]:1.863486639608E0,(16[&rate=2.6453504132116143E-4]:3.137660082686E1,((22[&rate=6.710968886686014E-4]:2.596072626196E0,21[&rate=2.86688685273389E-4]:2.596072626196E0)[&rate=6.327134971755614E-4]:3.274572047136E0,20[&rate=5.057994878985228E-4]:5.870644673332E0)[&rate=0.0017279256676925368]:2.550595615352E1)[&rate=9.819658954987344E-4]:3.93956725386E1)[&rate=0.001543284915538183]:1.315472109451E0)[&rate=5.279752491228346E-4]:1.00970040541E0)[&rate=4.389047345182469E-4]:1.333226695538E0)[&rate=5.964440272884674E-4]:7.322957775129E0,(17[&rate=7.572336556107255E-4]:7.116957503136E1,(27[&rate=2.3626765117008632E-4]:2.746220679016E1,28[&rate=0.0010424528456968011]:2.746220679016E1)[&rate=6.710968886686014E-4]:4.37073682412E1)[&rate=3.6598208577750673E-4]:1.058405531963E1)[&rate=0.0013359547422368326]:4.447996548271E1); +tree STATE_630000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55125.231652800576,EEF_ucld_branchRates=-266.168517335019,lnP=-55125.231652800576,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.341258232041607E-4]:1.078026692096E1,9[&rate=6.936584378286078E-4]:1.078026692096E1)[&rate=8.75567611520907E-4]:4.783356539531E0,15[&rate=6.335500076847579E-4]:1.556362346049E1)[&rate=6.834128449464062E-4]:9.140523613584E1,(14[&rate=0.0015056335179426993]:3.957107188494E1,24[&rate=0.0010272245306107164]:3.957107188494E1)[&rate=0.0012393097183678837]:6.73977877114E1)[&rate=8.46449371552259E-4]:1.264671645973E1,((((((33[&rate=0.0010272245306107164]:5.977774987639E1,13[&rate=5.943309257868853E-4]:5.977774987639E1)[&rate=9.614473828927008E-4]:7.024606570969E0,(11[&rate=9.243515305050412E-4]:1.217787173477E1,29[&rate=7.361158666337805E-4]:1.217787173477E1)[&rate=7.361158666337805E-4]:5.462448471259E1)[&rate=2.83896066825626E-4]:1.643412839854E0,(19[&rate=7.25243161751436E-4]:1.490070512705E1,18[&rate=0.0010272245306107164]:1.490070512705E1)[&rate=4.897381474401612E-4]:5.354506416016E1)[&rate=8.065415824504377E-4]:2.7144124108E0,((10[&rate=7.361158666337805E-4]:1.927319091964E1,31[&rate=7.25243161751436E-4]:1.927319091964E1)[&rate=4.652747427866349E-4]:5.105014911743E1,23[&rate=5.544743487597746E-4]:7.032334003707E1)[&rate=6.139429804933677E-4]:8.368416609371E-1)[&rate=6.632429695818723E-4]:1.27826995239E0,(25[&rate=7.361158666337805E-4]:7.163357259705E1,(12[&rate=9.81801228283238E-4]:7.077927313034E1,((((30[&rate=6.632429695818723E-4]:4.661412431703E1,26[&rate=5.232434427277701E-4]:4.661412431703E1)[&rate=8.75567611520907E-4]:1.144425800709E1,32[&rate=4.5207807259658783E-4]:5.805838232412E1)[&rate=6.041464145620245E-4]:9.131155029833E0,((((4[&rate=5.943309257868853E-4]:1.85568007529E0,3[&rate=0.0015056335179426993]:1.85568007529E0)[&rate=9.243515305050412E-4]:2.323258390845E-1,2[&rate=6.936584378286078E-4]:2.088005914374E0)[&rate=8.326972179270191E-4]:6.643461802403E0,5[&rate=5.338441954849812E-4]:8.731467716777E0)[&rate=2.83896066825626E-4]:2.270385657534E0,((7[&rate=3.6395194806520485E-4]:6.107754268906E0,6[&rate=0.0010529309094995567]:6.107754268906E0)[&rate=6.73279812138648E-4]:1.366458678165E0,1[&rate=5.01249169856016E-4]:7.474212947071E0)[&rate=9.614473828927008E-4]:3.52764042724E0)[&rate=5.544743487597746E-4]:5.618768397964E1)[&rate=8.46449371552259E-4]:2.044400810835E0,(16[&rate=4.652747427866349E-4]:3.032377299825E1,((22[&rate=6.139429804933677E-4]:1.679797496544E0,21[&rate=8.910648793634818E-4]:1.679797496544E0)[&rate=7.040334785194983E-4]:4.190080048256E0,20[&rate=6.237385022331384E-4]:5.8698775448E0)[&rate=0.001772025390317845]:2.445389545345E1)[&rate=6.433939230102091E-4]:3.891016516653E1)[&rate=8.46449371552259E-4]:1.545334965553E0)[&rate=8.065415824504377E-4]:8.542994667133E-1)[&rate=3.867859600998175E-4]:8.048790533491E-1)[&rate=2.83896066825626E-4]:2.205949026484E0,(17[&rate=8.194100341730611E-4]:6.522854169963E1,(27[&rate=4.777816227899359E-4]:2.638670066015E1,28[&rate=5.943309257868853E-4]:2.638670066015E1)[&rate=8.326972179270191E-4]:3.884184103948E1)[&rate=4.652747427866349E-4]:9.415858977251E0)[&rate=9.243515305050412E-4]:4.497117537918E1); +tree STATE_640000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.84650663127,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.84650663127,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.297908801548182E-4]:1.154099858997E1,9[&rate=6.386442842349231E-4]:1.154099858997E1)[&rate=2.862110085253504E-4]:4.091512768611E0,15[&rate=9.457638681249037E-4]:1.563251135858E1)[&rate=8.574094344227503E-4]:8.960221699677E1,(14[&rate=0.001569920777061997]:3.717409823588E1,24[&rate=9.457638681249037E-4]:3.717409823588E1)[&rate=8.152716712551168E-4]:6.806063011947E1)[&rate=5.240537261061581E-4]:2.08146206292E1,((((((33[&rate=7.781050309515398E-4]:6.224879450103E1,13[&rate=4.8546634491867076E-4]:6.224879450103E1)[&rate=5.687402281010994E-4]:8.326727875796E0,(11[&rate=3.6054409432284204E-4]:1.283867992571E1,29[&rate=6.843349989053255E-4]:1.283867992571E1)[&rate=6.475730946763436E-4]:5.773684245112E1)[&rate=6.475730946763436E-4]:1.72144721602E0,(19[&rate=2.862110085253504E-4]:1.293616117955E1,18[&rate=8.024137048049879E-4]:1.293616117955E1)[&rate=5.861634640480331E-4]:5.93608084133E1)[&rate=6.035430124981981E-4]:5.539096777848E-1,((10[&rate=8.729205898997599E-4]:2.052202735412E1,31[&rate=6.843349989053255E-4]:2.052202735412E1)[&rate=3.3300031999735827E-4]:5.170343006566E1,23[&rate=3.8152263293738905E-4]:7.222545741978E1)[&rate=6.657144677825184E-4]:6.254218508537E-1)[&rate=7.900418973492115E-4]:2.337646095698E0,(25[&rate=7.338922164330571E-4]:7.369477580938E1,(12[&rate=8.729205898997599E-4]:7.173678772441E1,((((30[&rate=6.938654687813889E-4]:4.898180737303E1,26[&rate=5.687402281010994E-4]:4.898180737303E1)[&rate=9.068320983873778E-4]:1.060567997777E1,32[&rate=4.64306018826976E-4]:5.95874873508E1)[&rate=4.410450433911478E-4]:1.007508182503E1,(16[&rate=5.422252554014958E-4]:3.506689842539E1,((22[&rate=8.893461235203613E-4]:2.048572332449E0,21[&rate=7.665585394981147E-4]:2.048572332449E0)[&rate=7.900418973492115E-4]:4.415685720103E0,20[&rate=0.001126017967424592]:6.464258052553E0)[&rate=0.0013493338652388698]:2.860264037283E1)[&rate=9.457638681249037E-4]:3.459567075044E1)[&rate=5.332051297030672E-4]:1.053972450169E0,((((4[&rate=8.574094344227503E-4]:1.875073972964E0,3[&rate=6.657144677825184E-4]:1.875073972964E0)[&rate=5.948509732278965E-4]:4.657219546453E-1,2[&rate=3.3300031999735827E-4]:2.340795927609E0)[&rate=4.64306018826976E-4]:6.618756895973E0,5[&rate=9.457638681249037E-4]:8.959552823582E0)[&rate=6.843349989053255E-4]:2.220939676724E0,((7[&rate=4.64306018826976E-4]:7.22594253471E0,6[&rate=6.209988423414927E-4]:7.22594253471E0)[&rate=8.152716712551168E-4]:9.439076230323E-1,1[&rate=6.56591595675466E-4]:8.169850157742E0)[&rate=4.7509597696797893E-4]:3.010642342564E0)[&rate=4.8546634491867076E-4]:5.953604912569E1)[&rate=7.781050309515398E-4]:1.020246098418E0)[&rate=5.774652405965486E-4]:1.957988084963E0)[&rate=5.59971254500217E-4]:1.493749556956E0)[&rate=7.55363324816603E-4]:3.282903767356E0,(17[&rate=6.035430124981981E-4]:7.114302498067E1,(27[&rate=4.5299898433674284E-4]:2.765236879157E1,28[&rate=8.024137048049879E-4]:2.765236879157E1)[&rate=6.843349989053255E-4]:4.34906561891E1)[&rate=6.938654687813889E-4]:7.328404153022E0)[&rate=0.001569920777061997]:4.757791985086E1); +tree STATE_650000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55169.12236083816,EEF_ucld_branchRates=-266.168517335019,lnP=-55169.12236083816,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.5343334556357407E-4]:8.158955303552E0,9[&rate=5.116078669821801E-4]:8.158955303552E0)[&rate=3.001294835245537E-4]:7.011885611094E0,15[&rate=4.645028079971962E-4]:1.517084091465E1)[&rate=7.38549890715235E-4]:9.297440237023E1,(14[&rate=0.0014432627147440836]:4.004009762133E1,24[&rate=8.646993692585088E-4]:4.004009762133E1)[&rate=0.001143034979617999]:6.810514566354E1)[&rate=5.60218014292051E-4]:1.988004558654E1,((((((11[&rate=5.805299447205512E-4]:1.41822167886E1,29[&rate=5.02129966845865E-4]:1.41822167886E1)[&rate=5.90940228326011E-4]:5.590580628369E1,(33[&rate=5.805299447205512E-4]:6.038322655383E1,13[&rate=5.60218014292051E-4]:6.038322655383E1)[&rate=3.8641927869777963E-4]:9.704796518459E0)[&rate=3.7581176647797645E-4]:2.172428680981E0,(19[&rate=9.128466128091633E-4]:1.222856887584E1,18[&rate=7.86682946423221E-4]:1.222856887584E1)[&rate=3.4145709519656925E-4]:6.003188287743E1)[&rate=7.239041374155958E-4]:3.452964469511E0,((10[&rate=5.90940228326011E-4]:2.448073881832E1,31[&rate=9.128466128091633E-4]:2.448073881832E1)[&rate=2.633374880813624E-4]:4.946222166036E1,23[&rate=4.1671541795041604E-4]:7.394296047868E1)[&rate=2.3769650152992381E-4]:1.770455744099E0)[&rate=1.9554967203313237E-4]:2.126984746976E0,(25[&rate=6.015453985631121E-4]:7.745607777764E1,((((30[&rate=4.7390045221733283E-4]:4.902605817159E1,26[&rate=8.044359271544134E-4]:4.902605817159E1)[&rate=5.502808564476092E-4]:1.485519275112E1,32[&rate=5.211463404757726E-4]:6.388125092271E1)[&rate=8.432665159825392E-4]:9.132175959925E0,((((4[&rate=6.123660598754095E-4]:1.725021363397E0,3[&rate=4.264584493345213E-4]:1.725021363397E0)[&rate=6.83206581431845E-4]:4.729484448681E-1,2[&rate=5.90940228326011E-4]:2.197969808265E0)[&rate=7.538404745171573E-4]:7.440645874671E0,5[&rate=5.116078669821801E-4]:9.638615682936E0)[&rate=7.098359574575912E-4]:1.873934618758E0,((7[&rate=4.7390045221733283E-4]:7.265596401757E0,6[&rate=8.044359271544134E-4]:7.265596401757E0)[&rate=6.123660598754095E-4]:1.057172510036E0,1[&rate=4.8329264596848055E-4]:8.322768911793E0)[&rate=3.648459082857349E-4]:3.189781389901E0)[&rate=3.648459082857349E-4]:6.150087658094E1)[&rate=4.926969229423044E-4]:5.675626069142E-1,(12[&rate=6.705496928865602E-4]:7.346487184891E1,(16[&rate=3.9673730579614777E-4]:3.665298621354E1,((22[&rate=6.582767093213377E-4]:2.90435709736E0,21[&rate=3.8641927869777963E-4]:2.90435709736E0)[&rate=8.232440733068071E-4]:4.767397231649E0,20[&rate=9.128466128091633E-4]:7.67175432901E0)[&rate=8.646993692585088E-4]:2.898123188453E1)[&rate=7.098359574575912E-4]:3.681188563537E1)[&rate=7.38549890715235E-4]:1.161176406405E-1)[&rate=6.123660598754095E-4]:3.875088288094E0)[&rate=2.3769650152992381E-4]:3.843231921103E-1)[&rate=4.4561491054121084E-4]:2.316876938251E0,(17[&rate=9.128466128091633E-4]:6.671508981177E1,(27[&rate=7.098359574575912E-4]:2.489145295021E1,28[&rate=0.0014432627147440836]:2.489145295021E1)[&rate=5.502808564476092E-4]:4.182363686156E1)[&rate=1.9554967203313237E-4]:1.344218809623E1)[&rate=0.0017543291917417466]:4.786801096341E1); +tree STATE_660000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55134.47414417466,EEF_ucld_branchRates=-266.168517335019,lnP=-55134.47414417466,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.71237411192769E-4]:1.094427685358E1,9[&rate=3.657014084194037E-4]:1.094427685358E1)[&rate=7.401970147563408E-4]:4.551875452281E0,15[&rate=3.9838791101967896E-4]:1.549615230586E1)[&rate=7.593703000867164E-4]:9.728622694055E1,(14[&rate=9.952649967461013E-4]:3.907127516225E1,24[&rate=0.0013262627553173732]:3.907127516225E1)[&rate=9.952649967461013E-4]:7.371110408416E1)[&rate=7.218806463463418E-4]:9.018773516888E0,((((((33[&rate=6.71266307628606E-4]:6.276102159776E1,13[&rate=3.657014084194037E-4]:6.276102159776E1)[&rate=7.401970147563408E-4]:8.481825636748E0,(11[&rate=6.40494643598794E-4]:1.688726458979E1,29[&rate=3.0861640056765706E-4]:1.688726458979E1)[&rate=5.71237411192769E-4]:5.435558264472E1)[&rate=5.33596533251579E-4]:2.726208929287E0,(19[&rate=7.401970147563408E-4]:1.406105642491E1,18[&rate=3.321034194592191E-4]:1.406105642491E1)[&rate=4.8654834017796127E-4]:5.990799973888E1)[&rate=2.0353236697665761E-4]:3.185727249702E0,((10[&rate=4.528962439468675E-4]:2.17081169544E1,31[&rate=7.218806463463418E-4]:2.17081169544E1)[&rate=2.963447068533396E-4]:5.441610295572E1,23[&rate=5.584205606487737E-4]:7.612421991012E1)[&rate=8.231184055365022E-4]:1.030563503376E0)[&rate=1.3918894509147472E-4]:2.369944214028E0,(25[&rate=7.043350870872827E-4]:7.855518330875E1,(12[&rate=9.287377469162034E-4]:7.623166801973E1,((16[&rate=4.752073980127561E-4]:3.739530818991E1,((22[&rate=4.4188844379791794E-4]:2.882316744604E0,21[&rate=3.0861640056765706E-4]:2.882316744604E0)[&rate=2.4051849012791309E-4]:3.403682898258E0,20[&rate=5.215418333157876E-4]:6.285999642863E0)[&rate=0.001033615565585889]:3.110930854705E1)[&rate=8.722709513220864E-4]:3.738467481439E1,(((((4[&rate=5.843586107697706E-4]:2.160498202205E0,3[&rate=5.978125710037607E-4]:2.160498202205E0)[&rate=3.4346694368889646E-4]:3.816216020887E-1,2[&rate=8.722709513220864E-4]:2.542119804294E0)[&rate=4.309537988704615E-4]:6.601301187426E0,5[&rate=2.963447068533396E-4]:9.14342099172E0)[&rate=2.701868020007974E-4]:1.682539446435E0,((7[&rate=5.978125710037607E-4]:6.407293824102E0,6[&rate=8.469082125114964E-4]:6.407293824102E0)[&rate=2.0353236697665761E-4]:1.407442499557E0,1[&rate=5.33596533251579E-4]:7.814736323659E0)[&rate=5.584205606487737E-4]:3.011224114496E0)[&rate=3.321034194592191E-4]:6.127876432992E1,((30[&rate=7.795003287041114E-4]:5.253731772045E1,26[&rate=4.63996290543021E-4]:5.253731772045E1)[&rate=4.8654834017796127E-4]:1.288650713127E1,32[&rate=5.096959227996868E-4]:6.542382485171E1)[&rate=1.3918894509147472E-4]:6.680899916363E0)[&rate=4.200726778297663E-4]:2.675258236227E0)[&rate=0.001567272666063988]:1.451685015427E0)[&rate=9.952649967461013E-4]:2.323515289018E0)[&rate=9.287377469162034E-4]:9.695443187742E-1)[&rate=1.7857901969264346E-4]:3.051845902278E0,(17[&rate=8.994479096764004E-4]:7.117998367941E1,(27[&rate=4.309537988704615E-4]:2.897804536515E1,28[&rate=0.001567272666063988]:2.897804536515E1)[&rate=5.843586107697706E-4]:4.220193831426E1)[&rate=5.978125710037607E-4]:1.139658985039E1)[&rate=0.0017862720714384192]:3.92245792335E1); +tree STATE_670000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.85792063989,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.85792063989,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.520635108078546E-4]:7.543271595793E0,9[&rate=5.324229098026514E-4]:7.543271595793E0)[&rate=2.259316379158654E-4]:8.427154604391E0,15[&rate=7.807212812096443E-4]:1.597042620018E1)[&rate=9.725546641934992E-4]:9.786999399343E1,(14[&rate=0.0013622149073197443]:3.90087556056E1,24[&rate=0.0010002263651157058]:3.90087556056E1)[&rate=8.818717097618766E-4]:7.483166458801E1)[&rate=8.11275857748917E-4]:1.483607766548E1,((((((33[&rate=7.524749098426034E-4]:6.214211842794E1,13[&rate=4.0792450226278935E-4]:6.214211842794E1)[&rate=6.228223407578232E-4]:9.886269165998E0,(11[&rate=4.0792450226278935E-4]:1.868270891334E1,29[&rate=6.662684744027103E-4]:1.868270891334E1)[&rate=8.275939126450066E-4]:5.334567868061E1)[&rate=6.662684744027103E-4]:7.522939716015E-1,(19[&rate=8.11275857748917E-4]:1.229309509018E1,18[&rate=8.627725416836426E-4]:1.229309509018E1)[&rate=3.9582567425057094E-4]:6.048758647537E1)[&rate=9.238881935113331E-4]:2.728070626926E0,((10[&rate=2.259316379158654E-4]:2.090609419652E1,31[&rate=4.930157603937822E-4]:2.090609419652E1)[&rate=2.9952457570938355E-4]:5.399611458794E1,23[&rate=4.6267142672046506E-4]:7.490220878446E1)[&rate=5.718515155647227E-4]:6.065434080099E-1)[&rate=4.7291356925166603E-4]:2.086571809043E0,(25[&rate=6.123910372702507E-4]:7.586476942151E1,((12[&rate=9.238881935113331E-4]:6.999804113558E1,((16[&rate=5.324229098026514E-4]:3.686536603907E1,((22[&rate=5.919174836517197E-4]:3.024686241844E0,21[&rate=6.441625344160192E-4]:3.024686241844E0)[&rate=5.919174836517197E-4]:4.339281485075E0,20[&rate=3.3903175386156703E-4]:7.363967726919E0)[&rate=0.0013622149073197443]:2.950139831215E1)[&rate=9.725546641934992E-4]:2.929900509661E1,((30[&rate=7.807212812096443E-4]:5.194846950857E1,26[&rate=7.260979768815303E-4]:5.194846950857E1)[&rate=9.725546641934992E-4]:9.5704507392E0,32[&rate=4.307412909875444E-4]:6.151892024777E1)[&rate=6.441625344160192E-4]:4.645450887907E0)[&rate=5.226152430580152E-4]:3.833669999907E0)[&rate=5.127916435008348E-4]:2.763839102462E0,((((4[&rate=4.522572015819319E-4]:2.23366047073E0,3[&rate=7.807212812096443E-4]:2.23366047073E0)[&rate=8.818717097618766E-4]:2.410682641266E-1,2[&rate=2.9952457570938355E-4]:2.474728734856E0)[&rate=8.627725416836426E-4]:6.490363303692E0,5[&rate=6.893137192413423E-4]:8.965092038548E0)[&rate=5.919174836517197E-4]:1.355500070588E0,((7[&rate=6.893137192413423E-4]:6.67887409269E0,6[&rate=7.663397547847432E-4]:6.67887409269E0)[&rate=3.3903175386156703E-4]:1.048225459168E0,1[&rate=6.55109515890978E-4]:7.727099551858E0)[&rate=6.334066642199869E-4]:2.593492557279E0)[&rate=6.441625344160192E-4]:6.244128812891E1)[&rate=4.0792450226278935E-4]:3.102889183467E0)[&rate=5.718515155647227E-4]:1.730554579998E0)[&rate=5.422331519668728E-4]:5.63892336702E0,(17[&rate=7.807212812096443E-4]:7.062304175994E1,(27[&rate=4.307412909875444E-4]:3.655569867441E1,28[&rate=5.718515155647227E-4]:3.655569867441E1)[&rate=0.0013622149073197443]:3.406734308553E1)[&rate=3.209432586320519E-4]:1.26112056086E1)[&rate=0.001501049095380693]:4.544225049056E1); +tree STATE_680000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.524234353135,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.524234353135,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.866498998405824E-4]:1.015529048147E1,9[&rate=6.215536206343159E-4]:1.015529048147E1)[&rate=7.215852057055438E-4]:5.681068259916E0,15[&rate=4.3904871216950646E-4]:1.583635874139E1)[&rate=8.288412224175205E-4]:8.724769201059E1,(14[&rate=0.0014292631066323972]:3.839144165314E1,24[&rate=0.0010563302560340757]:3.839144165314E1)[&rate=8.952960762083821E-4]:6.469260909883E1)[&rate=3.244891975349426E-4]:2.182907292989E1,((((((33[&rate=8.952960762083821E-4]:6.215090657832E1,13[&rate=3.244891975349426E-4]:6.215090657832E1)[&rate=9.140174426663497E-4]:7.952863993192E0,(11[&rate=8.288412224175205E-4]:1.667493574762E1,29[&rate=9.338188335658802E-4]:1.667493574762E1)[&rate=6.866498998405824E-4]:5.342883482389E1)[&rate=5.074087395799766E-4]:6.682256662614E-1,(19[&rate=7.097076593232368E-4]:1.261706616E1,18[&rate=9.338188335658802E-4]:1.261706616E1)[&rate=4.3904871216950646E-4]:5.815493007777E1)[&rate=5.180190675039886E-4]:3.807030329433E0,((10[&rate=6.534809543688705E-4]:2.352422494263E1,31[&rate=6.980702824751173E-4]:2.352422494263E1)[&rate=4.262979069660757E-4]:5.000478146722E1,23[&rate=6.320877214927883E-4]:7.352900640985E1)[&rate=2.9508130383477287E-4]:1.050020157352E0)[&rate=0.0010277155466883485]:1.837376472571E0,(25[&rate=7.720336705784117E-4]:7.56145630542E1,(((((4[&rate=9.773485274631724E-4]:1.872874099025E0,3[&rate=5.595528142105621E-4]:1.872874099025E0)[&rate=6.007256628975512E-4]:6.250865748699E-1,2[&rate=0.0013358271714617124]:2.497960673895E0)[&rate=6.111052047023954E-4]:6.20273999306E0,5[&rate=6.643749922902319E-4]:8.700700666955E0)[&rate=9.773485274631724E-4]:1.655641189835E0,((7[&rate=3.244891975349426E-4]:7.250701393724E0,6[&rate=0.0010277155466883485]:7.250701393724E0)[&rate=5.801053546679922E-4]:6.909342635087E-1,1[&rate=3.663287998448405E-4]:7.941635657233E0)[&rate=8.288412224175205E-4]:2.414706199557E0)[&rate=7.337279664951338E-4]:6.197168317222E1,((16[&rate=5.595528142105621E-4]:3.315157231532E1,((22[&rate=6.534809543688705E-4]:2.499576835461E0,21[&rate=7.855384955961385E-4]:2.499576835461E0)[&rate=4.262979069660757E-4]:4.669333350052E0,20[&rate=5.698297359159443E-4]:7.168910185513E0)[&rate=0.0014292631066323972]:2.598266212981E1)[&rate=6.111052047023954E-4]:3.701739088891E1,(((30[&rate=8.605805870598771E-4]:4.883865362571E1,26[&rate=6.111052047023954E-4]:4.883865362571E1)[&rate=5.698297359159443E-4]:1.326725487104E1,32[&rate=4.85703855258917E-4]:6.210590849675E1)[&rate=3.663287998448405E-4]:6.731659599246E0,12[&rate=9.140174426663497E-4]:6.8837568096E1)[&rate=4.5127315630468515E-4]:1.33139510823E0)[&rate=2.4622526851035884E-4]:2.159061824779E0)[&rate=8.288412224175205E-4]:3.286538025188E0)[&rate=4.6307348886610395E-4]:8.018399855796E-1)[&rate=6.320877214927883E-4]:5.079704346199E0,(17[&rate=8.605805870598771E-4]:7.441522440614E1,(27[&rate=4.7452922422796796E-4]:3.419303320423E1,28[&rate=7.097076593232368E-4]:3.419303320423E1)[&rate=6.866498998405824E-4]:4.022219120191E1)[&rate=0.0010277155466883485]:7.08088297984E0)[&rate=0.0015717039084154722]:4.341701629589E1); +tree STATE_690000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55145.296861861156,EEF_ucld_branchRates=-266.168517335019,lnP=-55145.296861861156,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.215839330559491E-4]:8.727486874423E0,9[&rate=6.007742076546003E-4]:8.727486874423E0)[&rate=3.6369825295196095E-4]:5.794685985251E0,15[&rate=4.729215451078965E-4]:1.452217285967E1)[&rate=6.65415317490201E-4]:8.596878965233E1,(14[&rate=0.0014477503938112415]:3.627989362714E1,24[&rate=0.0010652375511031767]:3.627989362714E1)[&rate=8.486957305791317E-4]:6.421106888487E1)[&rate=6.880593485390563E-4]:1.931151853158E1,((((((33[&rate=7.887129129372406E-4]:5.879127749069E1,13[&rate=4.2418320703312243E-4]:5.879127749069E1)[&rate=7.115106053312416E-4]:8.496333980606E0,(11[&rate=0.0010359622853050353]:1.352426304648E1,29[&rate=6.996732018150066E-4]:1.352426304648E1)[&rate=6.113088661721687E-4]:5.376334842482E1)[&rate=2.920302825247366E-4]:1.51422809349E0,(19[&rate=8.825057608575499E-4]:1.650421641777E1,18[&rate=7.359527748179355E-4]:1.650421641777E1)[&rate=4.494114045744743E-4]:5.229762314702E1)[&rate=7.115106053312416E-4]:3.729534402329E0,((10[&rate=8.825057608575499E-4]:2.05952897697E1,31[&rate=5.061890719743319E-4]:2.05952897697E1)[&rate=3.215839330559491E-4]:5.111433133326E1,23[&rate=4.370605084687103E-4]:7.170962110296E1)[&rate=3.215839330559491E-4]:8.217528641558E-1)[&rate=0.0010091793443560738]:1.895877043872E0,(25[&rate=8.328488314939918E-4]:7.294086174478E1,((((30[&rate=4.494114045744743E-4]:5.276342177712E1,26[&rate=4.952990256659112E-4]:5.276342177712E1)[&rate=6.996732018150066E-4]:1.053671482694E1,32[&rate=3.807440737582496E-4]:6.330013660406E1)[&rate=5.590129302216315E-4]:6.487791310091E0,((16[&rate=4.6133848094382675E-4]:3.618405412815E1,((22[&rate=6.434166919326495E-4]:2.473250895377E0,21[&rate=5.694326117037593E-4]:2.473250895377E0)[&rate=2.4303039188013634E-4]:3.011091804869E0,20[&rate=7.616007087225763E-4]:5.484342700246E0)[&rate=0.0015942636554675863]:3.069971142791E1)[&rate=8.652205888128571E-4]:3.061007375097E1,((((4[&rate=0.0013517586657489083]:1.414051227246E0,3[&rate=9.197615900896547E-4]:1.414051227246E0)[&rate=6.65415317490201E-4]:3.925802539332E-1,2[&rate=6.113088661721687E-4]:1.806631481179E0)[&rate=9.61482552004752E-4]:5.763210068547E0,5[&rate=5.590129302216315E-4]:7.569841549727E0)[&rate=4.1064346084679744E-4]:3.625816056606E0,((7[&rate=9.844619483743294E-4]:6.831971690584E0,6[&rate=8.328488314939918E-4]:6.831971690584E0)[&rate=9.197615900896547E-4]:1.574109867738E0,1[&rate=5.275583303532325E-4]:8.406081558322E0)[&rate=6.113088661721687E-4]:2.789576048011E0)[&rate=5.590129302216315E-4]:5.559847027279E1)[&rate=9.197615900896547E-4]:2.993800035034E0)[&rate=9.006478988555155E-4]:9.423049640009E-1,12[&rate=9.844619483743294E-4]:7.073023287815E1)[&rate=7.115106053312416E-4]:2.210628866624E0)[&rate=6.766469588904813E-4]:1.486389266211E0)[&rate=5.590129302216315E-4]:5.09927819254E0,(17[&rate=0.0010359622853050353]:6.937534640125E1,(27[&rate=6.65415317490201E-4]:3.204338237984E1,28[&rate=8.328488314939918E-4]:3.204338237984E1)[&rate=6.32612963298215E-4]:3.733196402141E1)[&rate=6.007742076546003E-4]:1.015118280228E1)[&rate=0.0015942636554675863]:4.027595184005E1); +tree STATE_700000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55144.19474204878,EEF_ucld_branchRates=-266.168517335019,lnP=-55144.19474204878,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.3434240303322354E-4]:9.620568570288E0,9[&rate=8.873219483806976E-4]:9.620568570288E0)[&rate=5.92434354895532E-4]:5.077474614746E0,15[&rate=7.721828458957581E-4]:1.469804318503E1)[&rate=9.210784524474463E-4]:8.947966993992E1,(14[&rate=0.0012166309694360978]:3.948164249207E1,24[&rate=9.602897536883608E-4]:3.948164249207E1)[&rate=8.873219483806976E-4]:6.469607063288E1)[&rate=5.036601767915853E-4]:2.44419372561E1,((((((33[&rate=7.616283232992528E-4]:5.882758233744E1,13[&rate=3.81307518756999E-4]:5.882758233744E1)[&rate=7.94290146950141E-4]:1.187712991081E1,(11[&rate=5.585460973463334E-4]:1.343342707368E1,29[&rate=6.855165207651892E-4]:1.343342707368E1)[&rate=8.059198746580889E-4]:5.727128517457E1)[&rate=5.133844276169566E-4]:1.141102661183E0,(19[&rate=6.341149692069892E-4]:1.609860126394E1,18[&rate=5.756286087316243E-4]:1.609860126394E1)[&rate=4.935885444441146E-4]:5.574721364549E1)[&rate=3.0723789612829426E-4]:2.802227660436E0,((10[&rate=6.341149692069892E-4]:2.096699292755E1,31[&rate=7.034653448133004E-4]:2.096699292755E1)[&rate=5.840567681468686E-4]:5.342159084022E1,23[&rate=4.830943310774425E-4]:7.438858376777E1)[&rate=8.305680379876458E-4]:2.594588020934E-1)[&rate=6.174255544912477E-4]:3.272768979905E0,(25[&rate=7.034653448133004E-4]:7.789394877563E1,((((((3[&rate=7.616283232992528E-4]:1.258877681322E0,4[&rate=6.944225892656022E-4]:1.258877681322E0)[&rate=6.174255544912477E-4]:7.851693622045E-1,2[&rate=4.935885444441146E-4]:2.044047043527E0)[&rate=6.944225892656022E-4]:8.20298540168E0,5[&rate=5.228209862780989E-4]:1.024703244521E1)[&rate=6.680521967023232E-4]:2.10718701555E0,((7[&rate=5.840567681468686E-4]:7.643243715345E0,6[&rate=6.425094712853939E-4]:7.643243715345E0)[&rate=4.720803041679949E-4]:5.244173456621E-1,1[&rate=5.320183078131214E-4]:8.167661061007E0)[&rate=8.719822784022603E-4]:4.18655839975E0)[&rate=5.840567681468686E-4]:6.09673083151E1,12[&rate=7.94290146950141E-4]:7.332152777585E1)[&rate=8.179943454625525E-4]:1.771921839326E0,((16[&rate=6.425094712853939E-4]:3.476282069415E1,((22[&rate=0.0011064763052693852]:2.28482309579E0,21[&rate=9.82694113909724E-4]:2.28482309579E0)[&rate=6.680521967023232E-4]:3.519913156019E0,20[&rate=7.220291014084335E-4]:5.804736251809E0)[&rate=0.0013105244203032464]:2.895808444234E1)[&rate=8.574794315301806E-4]:3.916433756354E1,((30[&rate=4.192683873927657E-4]:5.290110743992E1,26[&rate=6.855165207651892E-4]:5.290110743992E1)[&rate=8.574794315301806E-4]:1.364308024676E1,32[&rate=3.81307518756999E-4]:6.654418768668E1)[&rate=6.509549257154535E-4]:7.382970571007E0)[&rate=6.944225892656022E-4]:1.166291357491E0)[&rate=8.437046508576388E-4]:2.800499160448E0)[&rate=6.680521967023232E-4]:2.686277414348E-2)[&rate=3.5398847134130855E-4]:4.88529137473E0,(17[&rate=9.398729800770852E-4]:7.613020311565E1,(27[&rate=3.0723789612829426E-4]:3.354969664247E1,28[&rate=9.398729800770852E-4]:3.354969664247E1)[&rate=8.305680379876458E-4]:4.258050647319E1)[&rate=4.479243631602747E-4]:6.675899808849E0)[&rate=0.0015099391775709992]:4.581354745655E1); +tree STATE_710000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55152.16259121707,EEF_ucld_branchRates=-266.168517335019,lnP=-55152.16259121707,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.1047061865411586E-4]:9.747723287791E0,9[&rate=5.965791927348159E-4]:9.747723287791E0)[&rate=2.561835720264566E-4]:8.370232443076E0,15[&rate=5.317376178904604E-4]:1.811795573087E1)[&rate=8.7788502267932E-4]:9.453109553354E1,(14[&rate=0.0014752347638372402]:3.755417300575E1,24[&rate=0.0016392466903379658]:3.755417300575E1)[&rate=0.001054746914774242]:7.509487825866E1)[&rate=4.4536487412720173E-4]:1.179444475938E1,(((((((33[&rate=6.304878663443682E-4]:6.158877488845E1,13[&rate=2.846652498013254E-4]:6.158877488845E1)[&rate=2.846652498013254E-4]:9.130158948899E0,(11[&rate=6.421347020441654E-4]:1.414676085813E1,29[&rate=8.226605510440854E-4]:1.414676085813E1)[&rate=7.448218155113836E-4]:5.657217297921E1)[&rate=3.424004405214619E-4]:3.087365940347E0,(19[&rate=3.853400599435204E-4]:1.942434366902E1,18[&rate=5.211065892804474E-4]:1.942434366902E1)[&rate=3.576819164273075E-4]:5.438195610868E1)[&rate=4.998234221834986E-4]:3.315074573556E0,((10[&rate=7.89765588203763E-4]:2.273603842399E1,31[&rate=6.539875064008666E-4]:2.273603842399E1)[&rate=3.256727572334932E-4]:5.382998291577E1,23[&rate=5.104755199825095E-4]:7.656602133977E1)[&rate=5.965791927348159E-4]:5.553530114843E-1)[&rate=8.982786789121937E-4]:3.051756188287E0,25[&rate=6.6606844473983E-4]:8.017313053954E1)[&rate=7.742571869888298E-4]:4.633993391844E-1,(12[&rate=9.429303857568813E-4]:7.738463362036E1,((16[&rate=3.98150557902521E-4]:3.490027835298E1,((22[&rate=8.226605510440854E-4]:2.812386927172E0,21[&rate=6.784012434221982E-4]:2.812386927172E0)[&rate=4.340090785879061E-4]:2.747541406389E0,20[&rate=7.039267840338464E-4]:5.559928333561E0)[&rate=9.941998788494163E-4]:2.934035001942E1)[&rate=0.0010230892382511732]:4.019266117058E1,(((((3[&rate=5.965791927348159E-4]:1.572798064772E0,4[&rate=6.539875064008666E-4]:1.572798064772E0)[&rate=0.001289478666040962]:4.012887009955E-1,2[&rate=2.561835720264566E-4]:1.974086765767E0)[&rate=0.001054746914774242]:8.129624981412E0,5[&rate=7.592932405040965E-4]:1.010371174718E1)[&rate=8.226605510440854E-4]:1.769157844494E0,((7[&rate=4.565155507732413E-4]:9.411714199147E0,6[&rate=6.910114512848982E-4]:9.411714199147E0)[&rate=8.585653883768499E-4]:1.073440912993E0,1[&rate=5.638235398287805E-4]:1.048515511214E1)[&rate=5.746440153443983E-4]:1.387714479534E0)[&rate=2.561835720264566E-4]:6.0026516891E1,((30[&rate=5.965791927348159E-4]:5.258865345385E1,26[&rate=5.746440153443983E-4]:5.258865345385E1)[&rate=8.982786789121937E-4]:1.119713119561E1,32[&rate=4.1047061865411586E-4]:6.378578464946E1)[&rate=8.982786789121937E-4]:8.113601833215E0)[&rate=6.190260950066914E-4]:3.193553040891E0)[&rate=8.585653883768499E-4]:2.291694096798E0)[&rate=6.6606844473983E-4]:3.25189625836E0)[&rate=9.19898723826655E-4]:3.107668872288E0,(17[&rate=6.6606844473983E-4]:7.394114711231E1,(27[&rate=5.104755199825095E-4]:3.227335327091E1,28[&rate=0.0010898116137338]:3.227335327091E1)[&rate=5.104755199825095E-4]:4.16677938414E1)[&rate=4.22398032324578E-4]:9.803051638698E0)[&rate=0.0020038908894589374]:4.069929727278E1); +tree STATE_720000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55128.437647093546,EEF_ucld_branchRates=-266.168517335019,lnP=-55128.437647093546,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.4714284115444344E-4]:7.698414580996E0,9[&rate=3.590768975293094E-4]:7.698414580996E0)[&rate=5.027868799674934E-4]:8.014775917607E0,15[&rate=2.1652890150743452E-4]:1.57131904986E1)[&rate=7.542709112299139E-4]:9.419732739995E1,(14[&rate=0.0012481677256810794]:3.871593463702E1,24[&rate=7.362213210333269E-4]:3.871593463702E1)[&rate=7.362213210333269E-4]:7.119458326153E1)[&rate=3.3584894590697734E-4]:1.613959692283E1,(((25[&rate=8.137925538909451E-4]:7.58412168689E1,(12[&rate=6.001833167610127E-4]:7.415114769211E1,((16[&rate=2.1652890150743452E-4]:3.777673315689E1,((22[&rate=8.358035248326413E-4]:2.757134007461E0,21[&rate=4.362248970592852E-4]:2.757134007461E0)[&rate=8.591430859362285E-4]:4.410566543483E0,20[&rate=5.027868799674934E-4]:7.167700550944E0)[&rate=0.0015576065638328409]:3.060903260595E1)[&rate=8.591430859362285E-4]:3.477805301168E1,(((30[&rate=9.10611844355988E-4]:5.104806591514E1,26[&rate=8.137925538909451E-4]:5.104806591514E1)[&rate=5.619397088003217E-4]:1.272330067344E1,32[&rate=4.2533071986695627E-4]:6.377136658858E1)[&rate=6.001833167610127E-4]:8.187372861796E0,((((3[&rate=3.3584894590697734E-4]:1.494364366211E0,4[&rate=3.1134171404063394E-4]:1.494364366211E0)[&rate=5.258911151318315E-4]:1.665212743374E-1,2[&rate=0.0010416031154881508]:1.660885640548E0)[&rate=4.362248970592852E-4]:9.918953221125E0,5[&rate=3.3584894590697734E-4]:1.157983886167E1)[&rate=6.272383871502857E-4]:3.068712715475E0,((7[&rate=8.840017485763845E-4]:9.492237504676E0,6[&rate=5.871513760611351E-4]:9.492237504676E0)[&rate=0.0010416031154881508]:1.403036134274E0,1[&rate=1.9081278232996633E-4]:1.089527363895E1)[&rate=2.5445568214790414E-4]:3.753277938199E0)[&rate=5.258911151318315E-4]:5.731018787323E1)[&rate=4.5810523087557733E-4]:5.960467181989E-1)[&rate=0.0015576065638328409]:1.596361523538E0)[&rate=1.9081278232996633E-4]:1.690069176791E0)[&rate=6.413244653561944E-4]:1.321673756194E0,((((33[&rate=7.022855049335241E-4]:6.040343456338E1,13[&rate=4.362248970592852E-4]:6.040343456338E1)[&rate=6.001833167610127E-4]:9.849334013994E0,(11[&rate=6.862634401957692E-4]:1.398861604052E1,29[&rate=7.731489892509699E-4]:1.398861604052E1)[&rate=5.619397088003217E-4]:5.626415253685E1)[&rate=6.135356247433027E-4]:7.786426852897E-1,(19[&rate=3.815228180155034E-4]:1.864630618967E1,18[&rate=5.377012076378003E-4]:1.864630618967E1)[&rate=4.91453891454983E-4]:5.238510507299E1)[&rate=3.4758676312168806E-4]:2.434301491946E0,((10[&rate=8.591430859362285E-4]:1.982585522111E1,31[&rate=7.731489892509699E-4]:1.982585522111E1)[&rate=3.703738759141882E-4]:5.17910191079E1,23[&rate=5.377012076378003E-4]:7.161687432901E1)[&rate=5.142595691639368E-4]:1.848838425599E0)[&rate=2.847363333248489E-4]:3.697177870488E0)[&rate=2.5445568214790414E-4]:3.68316800085E0,(17[&rate=0.0010042218156638494]:6.9997896511E1,(27[&rate=6.135356247433027E-4]:3.34253101085E1,28[&rate=0.0010042218156638494]:3.34253101085E1)[&rate=9.392607560333663E-4]:3.657258640251E1)[&rate=2.1652890150743452E-4]:1.084816211494E1)[&rate=0.001767527490188106]:4.520405619543E1); +tree STATE_730000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55131.80379113949,EEF_ucld_branchRates=-266.168517335019,lnP=-55131.80379113949,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.647144087074688E-4]:7.101155294058E0,9[&rate=6.740492920858453E-4]:7.101155294058E0)[&rate=4.745976159806863E-4]:8.767169712958E0,15[&rate=7.209268917298747E-4]:1.586832500702E1)[&rate=7.089149739806845E-4]:9.800012542334E1,(14[&rate=0.001495872497831559]:4.280745384554E1,24[&rate=0.0011328609607325862]:4.280745384554E1)[&rate=9.101190668720371E-4]:7.106099658482E1)[&rate=9.918913332450212E-4]:5.294251816873E0,(((25[&rate=9.918913332450212E-4]:7.303258407362E1,(12[&rate=0.001099357543121468]:7.094137043432E1,((16[&rate=4.6228154670612063E-4]:3.324570871578E1,((22[&rate=0.0012626295528364237]:3.027294996807E0,21[&rate=7.584547903961223E-4]:3.027294996807E0)[&rate=0.001069030908587114]:3.652288845013E0,20[&rate=6.854970560363986E-4]:6.679583841819E0)[&rate=9.486902757869499E-4]:2.656612487396E1)[&rate=9.696294063288104E-4]:3.585564217513E1,(((30[&rate=4.8655961662247624E-4]:5.201479155378E1,26[&rate=5.538881674987379E-4]:5.201479155378E1)[&rate=7.089149739806845E-4]:8.412617476927E0,32[&rate=2.998997133194518E-4]:6.042740903071E1)[&rate=3.738118256348569E-4]:7.441775945997E0,((((3[&rate=7.988073898077652E-4]:1.88738434551E0,4[&rate=5.647144087074688E-4]:1.88738434551E0)[&rate=4.982332694464857E-4]:4.13840554305E-1,2[&rate=7.456712569923056E-4]:2.301224899815E0)[&rate=8.429460850682915E-4]:1.012398956188E1,5[&rate=7.715503101144333E-4]:1.24252144617E1)[&rate=0.001099357543121468]:2.024196087324E0,((7[&rate=2.998997133194518E-4]:9.872347513442E0,6[&rate=6.627495122872893E-4]:9.872347513442E0)[&rate=6.515790633218831E-4]:1.149946919438E0,1[&rate=2.998997133194518E-4]:1.102229443288E1)[&rate=6.295539675120838E-4]:3.427116116141E0)[&rate=4.982332694464857E-4]:5.341977442769E1)[&rate=9.486902757869499E-4]:1.232165914205E0)[&rate=0.001495872497831559]:1.840019543411E0)[&rate=8.587186234898988E-4]:2.091213639295E0)[&rate=7.331708047181826E-4]:1.851350903587E0,((((33[&rate=8.429460850682915E-4]:5.795037900231E1,13[&rate=4.3623470048674025E-4]:5.795037900231E1)[&rate=4.495291499934678E-4]:1.081282030538E1,(11[&rate=6.186638584017472E-4]:1.355525496209E1,29[&rate=5.755008082739152E-4]:1.355525496209E1)[&rate=9.101190668720371E-4]:5.520794434559E1)[&rate=5.862691228446282E-4]:1.526351258399E0,(19[&rate=8.587186234898988E-4]:1.259959161125E1,18[&rate=7.089149739806845E-4]:1.259959161125E1)[&rate=4.074060315417476E-4]:5.768995895484E1)[&rate=9.486902757869499E-4]:1.650194034578E0,((10[&rate=3.3037124662341953E-4]:1.876505235261E1,31[&rate=9.289009833428938E-4]:1.876505235261E1)[&rate=3.3037124662341953E-4]:5.200723263906E1,23[&rate=6.515790633218831E-4]:7.077228499167E1)[&rate=8.922257070953348E-4]:1.167459608985E0)[&rate=3.738118256348569E-4]:2.944190376546E0)[&rate=5.755008082739152E-4]:3.440669051437E0,(17[&rate=7.331708047181826E-4]:7.478101257142E1,(27[&rate=4.745976159806863E-4]:3.549648188096E1,28[&rate=7.988073898077652E-4]:3.549648188096E1)[&rate=6.186638584017472E-4]:3.928453069046E1)[&rate=6.627495122872893E-4]:3.543591457219E0)[&rate=0.001647861734939]:4.083809821859E1); +tree STATE_740000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55126.60025537764,EEF_ucld_branchRates=-266.168517335019,lnP=-55126.60025537764,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.5079674202364196E-4]:7.703761754284E0,9[&rate=5.695444773509621E-4]:7.703761754284E0)[&rate=4.626130554710346E-4]:7.745919236501E0,15[&rate=7.338023253706403E-4]:1.544968099079E1)[&rate=6.980582000349908E-4]:1.066528773447E2,(14[&rate=0.001574717516386066]:4.850572664216E1,24[&rate=5.489320732060565E-4]:4.850572664216E1)[&rate=9.555586641063289E-4]:7.359683169329E1)[&rate=7.590587178879896E-4]:2.992233415676E0,(((25[&rate=7.857457772505928E-4]:7.330244429213E1,(12[&rate=8.291658861006681E-4]:7.214993590809E1,((16[&rate=4.740849913178133E-4]:3.260322047095E1,((22[&rate=6.642852194112276E-4]:2.930912245307E0,21[&rate=7.216296532190483E-4]:2.930912245307E0)[&rate=9.555586641063289E-4]:2.882313236993E0,20[&rate=9.145885169362876E-4]:5.8132254823E0)[&rate=0.0012117130813143443]:2.678999498865E1)[&rate=0.001057354581482341]:3.766157308385E1,(((30[&rate=6.005004457168117E-4]:4.985762433584E1,26[&rate=6.980582000349908E-4]:4.985762433584E1)[&rate=0.0014316796365791327]:5.789941750504E0,32[&rate=4.740849913178133E-4]:5.564756608634E1)[&rate=6.425868761123275E-4]:1.072621740463E1,((((3[&rate=4.257901207032593E-4]:1.67986013645E0,4[&rate=4.257901207032593E-4]:1.67986013645E0)[&rate=5.489320732060565E-4]:8.056121164093E-1,2[&rate=5.901523851577283E-4]:2.48547225286E0)[&rate=7.997206797661216E-4]:9.328822112136E0,5[&rate=9.344499766007618E-4]:1.1814294365E1)[&rate=3.6576035860777116E-4]:1.561487026195E0,((7[&rate=2.9447170031883036E-4]:7.656186005086E0,6[&rate=6.109010194392864E-4]:7.656186005086E0)[&rate=6.980582000349908E-4]:2.239901212827E0,1[&rate=3.238921143560036E-4]:9.896087217913E0)[&rate=8.779840469628108E-4]:3.479694173277E0)[&rate=6.866110411216975E-4]:5.299800209978E1)[&rate=6.005004457168117E-4]:3.891010063832E0)[&rate=4.626130554710346E-4]:1.885142353287E0)[&rate=8.609947362058409E-4]:1.152508384042E0)[&rate=3.6576035860777116E-4]:1.070594667341E0,((((33[&rate=5.489320732060565E-4]:5.382788768487E1,13[&rate=6.319273304807705E-4]:5.382788768487E1)[&rate=6.866110411216975E-4]:1.305362889968E1,(11[&rate=4.740849913178133E-4]:1.285120266196E1,29[&rate=8.141765270534006E-4]:1.285120266196E1)[&rate=9.344499766007618E-4]:5.403031392259E1)[&rate=8.779840469628108E-4]:1.264033537023E0,(19[&rate=9.344499766007618E-4]:1.177495731508E1,18[&rate=0.0010023706401884815]:1.177495731508E1)[&rate=2.9447170031883036E-4]:5.637059280649E1)[&rate=8.779840469628108E-4]:2.283863614768E0,((10[&rate=6.213710317707395E-4]:1.875232251647E1,31[&rate=0.001057354581482341]:1.875232251647E1)[&rate=3.466029167042172E-4]:5.069071999074E1,23[&rate=5.592484596209643E-4]:6.94430425072E1)[&rate=7.46268687889429E-4]:9.863712291373E-1)[&rate=6.533669262917066E-4]:3.943625223134E0)[&rate=6.319273304807705E-4]:2.677719579803E0,(17[&rate=7.997206797661216E-4]:6.887674406461E1,(27[&rate=2.9447170031883036E-4]:3.290195614323E1,28[&rate=0.0010890570777127497]:3.290195614323E1)[&rate=7.216296532190483E-4]:3.597478792138E1)[&rate=3.980849543611684E-4]:8.174014474669E0)[&rate=0.0014316796365791327]:4.804403321184E1); +tree STATE_750000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55165.13148245269,EEF_ucld_branchRates=-266.168517335019,lnP=-55165.13148245269,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.491519171407602E-4]:1.13257396578E1,9[&rate=6.367032323998896E-4]:1.13257396578E1)[&rate=7.858985904720106E-4]:4.464111684496E0,15[&rate=4.1233866807259843E-4]:1.57898513423E1)[&rate=6.875024701695477E-4]:1.092846716327E2,(14[&rate=0.0012135271601642415]:4.944525647579E1,24[&rate=5.521552390624093E-4]:4.944525647579E1)[&rate=0.0010441679181449727]:7.562926649923E1)[&rate=9.262993402486683E-4]:1.723696214156E0,(((25[&rate=7.708275361737002E-4]:7.181708005364E1,((((30[&rate=6.121845853669823E-4]:4.985660910622E1,26[&rate=7.14127096657731E-4]:4.985660910622E1)[&rate=0.0010176993850459428]:9.995868247001E0,32[&rate=3.4625317941899754E-4]:5.985247735322E1)[&rate=4.6653751154651294E-4]:7.996827625354E0,((16[&rate=3.974271783369831E-4]:3.380740319842E1,((22[&rate=8.338699316080518E-4]:3.257441736696E0,21[&rate=7.56148400880097E-4]:3.257441736696E0)[&rate=6.367032323998896E-4]:3.227919911685E0,20[&rate=9.928761850134726E-4]:6.48536164838E0)[&rate=0.001311098279928485]:2.732204155004E1)[&rate=9.928761850134726E-4]:3.371522301258E1,((((3[&rate=3.2549049638558433E-4]:1.432620961347E0,4[&rate=0.0010441679181449727]:1.432620961347E0)[&rate=5.640993501024151E-4]:3.934199057588E-1,2[&rate=6.000746086707974E-4]:1.826040867106E0)[&rate=3.8165268046827126E-4]:9.803756223352E0,5[&rate=3.4625317941899754E-4]:1.162979709046E1)[&rate=6.617539259616744E-4]:2.042858207699E0,((7[&rate=5.521552390624093E-4]:7.913622803886E0,6[&rate=9.262993402486683E-4]:7.913622803886E0)[&rate=7.14127096657731E-4]:1.743947557529E0,1[&rate=8.68642972479051E-4]:9.657570361415E0)[&rate=7.278289091363475E-4]:4.015084936742E0)[&rate=4.535850203136672E-4]:5.384997091285E1)[&rate=4.1233866807259843E-4]:3.266787675755E-1)[&rate=0.001854090422241169]:1.851111882531E0,12[&rate=9.928761850134726E-4]:6.970041686111E1)[&rate=6.745302046339041E-4]:2.116663192535E0)[&rate=7.56148400880097E-4]:1.906772436903E0,((((33[&rate=9.473390789692693E-4]:4.850834425682E1,13[&rate=2.698812133915219E-4]:4.850834425682E1)[&rate=3.0109868906779026E-4]:2.007204490211E1,(19[&rate=8.509392570586737E-4]:1.274367209727E1,18[&rate=0.0012135271601642415]:1.274367209727E1)[&rate=2.698812133915219E-4]:5.583671706166E1)[&rate=7.858985904720106E-4]:1.489063433765E0,(11[&rate=4.7921810677827465E-4]:1.213878324424E1,29[&rate=6.000746086707974E-4]:1.213878324424E1)[&rate=8.870497241331672E-4]:5.793066934846E1)[&rate=2.698812133915219E-4]:2.53817815615E0,((10[&rate=6.745302046339041E-4]:1.574844011456E1,31[&rate=8.68642972479051E-4]:1.574844011456E1)[&rate=5.521552390624093E-4]:5.393796591546E1,23[&rate=5.521552390624093E-4]:6.968640603003E1)[&rate=4.6653751154651294E-4]:2.921224718818E0)[&rate=9.694820211563088E-4]:1.116221741701E0)[&rate=0.001854090422241169]:4.19015990179E0,(17[&rate=7.708275361737002E-4]:7.160357780666E1,(27[&rate=4.535850203136672E-4]:2.985614862999E1,28[&rate=7.278289091363475E-4]:2.985614862999E1)[&rate=0.0011364778888983934]:4.174742917667E1)[&rate=0.0011031761422500594]:6.310434585674E0)[&rate=0.0016618610145439333]:4.888420679684E1); +tree STATE_760000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55150.08139216103,EEF_ucld_branchRates=-266.168517335019,lnP=-55150.08139216103,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.314981863680117E-4]:1.057810436762E1,9[&rate=7.608845745462584E-4]:1.057810436762E1)[&rate=9.319934320103298E-4]:5.687615367494E0,15[&rate=3.312596340151894E-4]:1.626571973511E1)[&rate=5.664203806968808E-4]:1.064125138655E2,(14[&rate=0.0012172627751075552]:4.918394126722E1,24[&rate=0.0011367717096648856]:4.918394126722E1)[&rate=9.728832173059846E-4]:7.349429233336E1)[&rate=3.548911653147389E-4]:2.159766844575E0,(((25[&rate=6.648173355499342E-4]:7.173690375749E1,(((16[&rate=6.425047482213626E-4]:3.357165683496E1,((22[&rate=4.374828223255979E-4]:3.227346217645E0,21[&rate=8.951737975567943E-4]:3.227346217645E0)[&rate=0.0010191265941524744]:4.706956437383E0,20[&rate=4.085544272395475E-4]:7.934302655028E0)[&rate=0.0011367717096648856]:2.563735417993E1)[&rate=0.0010726829067514347]:3.487847865438E1,(((30[&rate=7.232137959318911E-4]:5.085351936054E1,26[&rate=7.111563980249784E-4]:5.085351936054E1)[&rate=7.355041950963425E-4]:5.606274960739E0,32[&rate=4.87984612252876E-4]:5.645979432128E1)[&rate=5.664203806968808E-4]:9.164441815777E0,((((3[&rate=3.0068819832319306E-4]:1.386269718831E0,4[&rate=6.993090370349473E-4]:1.386269718831E0)[&rate=6.648173355499342E-4]:9.015680628258E-1,2[&rate=9.728832173059846E-4]:2.287837781656E0)[&rate=9.518609925267524E-4]:8.781392866703E0,5[&rate=6.425047482213626E-4]:1.106923064836E1)[&rate=7.740302266416061E-4]:1.989949007122E0,((7[&rate=7.480522382478336E-4]:8.590470644928E0,6[&rate=8.304359398649335E-4]:8.590470644928E0)[&rate=0.0019890191065648115]:1.507932964525E0,1[&rate=7.355041950963425E-4]:1.009840360945E1)[&rate=9.319934320103298E-4]:2.960776046028E0)[&rate=3.548911653147389E-4]:5.256505648157E1)[&rate=4.759802642070843E-4]:2.825899352283E0)[&rate=8.780017683548512E-4]:9.370250402939E-1,12[&rate=8.457016837649496E-4]:6.938716052963E1)[&rate=7.740302266416061E-4]:2.349743227857E0)[&rate=0.0016539328735128782]:1.814833220011E0,((((33[&rate=8.780017683548512E-4]:5.738115193849E1,13[&rate=3.7484561195289716E-4]:5.738115193849E1)[&rate=4.374828223255979E-4]:9.330870970264E0,(11[&rate=3.548911653147389E-4]:1.266284089911E1,29[&rate=5.988638882428135E-4]:1.266284089911E1)[&rate=7.608845745462584E-4]:5.404918200965E1)[&rate=6.648173355499342E-4]:2.58010697349E0,(19[&rate=9.131374733105163E-4]:1.285022280699E1,18[&rate=4.636207892882266E-4]:1.285022280699E1)[&rate=5.555547953273699E-4]:5.644190707525E1)[&rate=7.232137959318911E-4]:2.055067333033E0,((10[&rate=6.314981863680117E-4]:1.423631361029E1,31[&rate=5.664203806968808E-4]:1.423631361029E1)[&rate=6.876501785246978E-4]:5.69156579906E1,23[&rate=4.996997673869134E-4]:7.115197160089E1)[&rate=5.772461075264776E-4]:1.952256143892E-1)[&rate=0.0010448292361712745]:2.204539762222E0)[&rate=2.500318344065562E-4]:5.604916837487E0,(17[&rate=9.518609925267524E-4]:7.349380335006E1,(27[&rate=4.2345762901174966E-4]:3.460634917552E1,28[&rate=8.156824950737969E-4]:3.460634917552E1)[&rate=8.615356420766822E-4]:3.888745417454E1)[&rate=4.87984612252876E-4]:5.662850464923E0)[&rate=0.001501293984588793]:4.568134663017E1); +tree STATE_770000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55114.92162296427,EEF_ucld_branchRates=-266.168517335019,lnP=-55114.92162296427,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.432835519837599E-4]:1.100973124427E1,9[&rate=4.8626015958343563E-4]:1.100973124427E1)[&rate=3.6454536364777235E-4]:5.649648486163E0,15[&rate=9.773747081365596E-4]:1.665937973043E1)[&rate=7.041365574460978E-4]:1.088979418912E2,(14[&rate=0.00100683793147973]:5.055464428328E1,24[&rate=5.570724333007862E-4]:5.055464428328E1)[&rate=8.238640701612584E-4]:7.500267733839E1)[&rate=0.0015473551116608954]:1.90590494296E0,(((25[&rate=6.66750193656917E-4]:7.568801303577E1,(12[&rate=6.432835519837599E-4]:7.28395630592E1,((16[&rate=2.5350035197253395E-4]:3.624643042751E1,((22[&rate=0.0018819295968046754]:3.169847917002E0,21[&rate=2.809302220991419E-4]:3.169847917002E0)[&rate=5.673801276555682E-4]:5.374182723095E0,20[&rate=4.963571768224952E-4]:8.544030640097E0)[&rate=0.0010394458163883933]:2.770239978741E1)[&rate=9.773747081365596E-4]:3.514029213497E1,(((30[&rate=7.594550785275435E-4]:4.843669821979E1,26[&rate=4.963571768224952E-4]:4.843669821979E1)[&rate=9.026669316639456E-4]:1.089160199797E1,32[&rate=3.773694205585881E-4]:5.932830021776E1)[&rate=5.570724333007862E-4]:1.015625933124E1,((((3[&rate=7.449171477244499E-4]:1.581049982656E0,4[&rate=9.773747081365596E-4]:1.581049982656E0)[&rate=8.419266792272108E-4]:5.692743077229E-1,2[&rate=4.963571768224952E-4]:2.150324290379E0)[&rate=4.2374920021226984E-4]:8.280531199389E0,5[&rate=3.509469086713054E-4]:1.043085548977E1)[&rate=6.319097002157012E-4]:3.133736605239E0,((7[&rate=3.89591068401691E-4]:8.514600229056E0,6[&rate=5.88308888642596E-4]:8.514600229056E0)[&rate=8.609824782466007E-4]:1.189340788068E0,1[&rate=7.449171477244499E-4]:9.703941017125E0)[&rate=4.2374920021226984E-4]:3.860651077882E0)[&rate=7.173032727879145E-4]:5.5919967454E1)[&rate=3.89591068401691E-4]:1.902163013473E0)[&rate=9.026669316639456E-4]:1.452840496727E0)[&rate=5.88308888642596E-4]:2.848449976572E0)[&rate=6.432835519837599E-4]:6.356517176802E-1,((((11[&rate=5.570724333007862E-4]:1.440547607658E1,29[&rate=7.745510698353868E-4]:1.440547607658E1)[&rate=5.777866535606864E-4]:5.443858763138E1,(33[&rate=7.902677421602243E-4]:5.598164503662E1,13[&rate=3.203025450350539E-4]:5.598164503662E1)[&rate=8.609824782466007E-4]:1.286241867135E1)[&rate=0.0011177048600246257]:1.20168189338E0,(19[&rate=7.902677421602243E-4]:1.397235759973E1,18[&rate=6.788925687625579E-4]:1.397235759973E1)[&rate=5.064289247136427E-4]:5.607338800162E1)[&rate=2.0843238030718346E-4]:3.542968383984E0,((10[&rate=6.097700838501141E-4]:1.417768651896E1,31[&rate=8.419266792272108E-4]:1.417768651896E1)[&rate=2.5350035197253395E-4]:5.807526881403E1,23[&rate=3.89591068401691E-4]:7.225295533299E1)[&rate=6.548891178634315E-4]:1.335758652342E0)[&rate=3.0224038688422003E-4]:2.734950768121E0)[&rate=4.2374920021226984E-4]:4.723307623727E0,(17[&rate=6.66750193656917E-4]:7.3448718883E1,(27[&rate=3.0224038688422003E-4]:3.512903799491E1,28[&rate=5.064289247136427E-4]:3.512903799491E1)[&rate=6.207454408416914E-4]:3.83196808881E1)[&rate=7.902677421602243E-4]:7.598253494177E0)[&rate=0.0015473551116608954]:4.641625418744E1); +tree STATE_780000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55093.86456053107,EEF_ucld_branchRates=-266.168517335019,lnP=-55093.86456053107,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.6012466573501645E-4]:1.053746753645E1,9[&rate=7.843047860504468E-4]:1.053746753645E1)[&rate=5.0581410233717E-4]:6.489712871796E0,15[&rate=6.668549178795747E-4]:1.702718040824E1)[&rate=8.015458992817076E-4]:1.081576364707E2,(14[&rate=0.0010088452388507896]:4.686537362107E1,24[&rate=7.843047860504468E-4]:4.686537362107E1)[&rate=8.794625563691221E-4]:7.831944325789E1)[&rate=9.018075066192845E-4]:2.199164145722E0,(((25[&rate=5.489645631946158E-4]:7.796823688088E1,(12[&rate=8.794625563691221E-4]:7.628120359625E1,((16[&rate=3.8494481865383707E-4]:3.925844318142E1,((22[&rate=9.256431578504333E-4]:3.898552965929E0,21[&rate=6.171938901760674E-4]:3.898552965929E0)[&rate=6.668549178795747E-4]:3.507791143949E0,20[&rate=7.518753656901365E-4]:7.406344109878E0)[&rate=0.001078375863887524]:3.185209907155E1)[&rate=0.0016588425512117208]:3.513292021811E1,(((30[&rate=4.738414741421734E-4]:5.233697041903E1,26[&rate=5.489645631946158E-4]:5.233697041903E1)[&rate=6.414866623474475E-4]:9.021800666699E0,32[&rate=3.8494481865383707E-4]:6.135877108573E1)[&rate=2.8319725278046085E-4]:1.110715814315E1,((((3[&rate=5.823601762645096E-4]:1.899038346581E0,4[&rate=5.380652963858298E-4]:1.899038346581E0)[&rate=4.082685346856245E-4]:4.65168179082E-1,2[&rate=7.518753656901365E-4]:2.364206525663E0)[&rate=3.329110694001762E-4]:1.023781694827E1,5[&rate=2.8319725278046085E-4]:1.260202347393E1)[&rate=2.616476222383976E-4]:1.828179289169E0,((7[&rate=4.8450094731595226E-4]:9.960393812488E0,6[&rate=2.3410886538660942E-4]:9.960393812488E0)[&rate=4.8450094731595226E-4]:1.001423899234E0,1[&rate=2.3410886538660942E-4]:1.096181771172E1)[&rate=5.710938812431369E-4]:3.46838505138E0)[&rate=6.171938901760674E-4]:5.803572646577E1)[&rate=7.074222519196173E-4]:1.925434170655E0)[&rate=0.0020503506414571372]:1.889840196723E0)[&rate=0.0012215168051150083]:1.687033284633E0)[&rate=5.380652963858298E-4]:2.020382433348E0,((((11[&rate=8.794625563691221E-4]:1.517329121857E1,29[&rate=6.540233155484778E-4]:1.517329121857E1)[&rate=8.384951592427277E-4]:5.376545967824E1,(33[&rate=7.217520812580537E-4]:5.494440421869E1,13[&rate=4.8450094731595226E-4]:5.494440421869E1)[&rate=6.414866623474475E-4]:1.399434667812E1)[&rate=8.195773665069302E-4]:2.145488792667E0,(19[&rate=6.171938901760674E-4]:1.705984317484E1,18[&rate=0.0010418052375398364]:1.705984317484E1)[&rate=3.7276616926621515E-4]:5.402439651463E1)[&rate=3.7276616926621515E-4]:5.919953961972E0,((10[&rate=8.384951592427277E-4]:1.517320766874E1,31[&rate=0.0010418052375398364]:1.517320766874E1)[&rate=2.3410886538660942E-4]:6.18247662637E1,23[&rate=6.292183926325313E-4]:7.699797393244E1)[&rate=2.8319725278046085E-4]:6.219719009778E-3)[&rate=3.8494481865383707E-4]:2.984425662784E0)[&rate=8.794625563691221E-4]:2.611635800183E0,(17[&rate=6.668549178795747E-4]:7.507192080716E1,(27[&rate=4.8450094731595226E-4]:3.492321718596E1,28[&rate=9.788162686139937E-4]:3.492321718596E1)[&rate=5.937857845228743E-4]:4.01487036212E1)[&rate=3.96754488019604E-4]:7.528334307257E0)[&rate=0.0016588425512117208]:4.478372591027E1); +tree STATE_790000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55129.87052347309,EEF_ucld_branchRates=-266.168517335019,lnP=-55129.87052347309,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.066097019294435E-4]:1.07568141584E1,9[&rate=8.67989763853159E-4]:1.07568141584E1)[&rate=4.6356073087012426E-4]:9.37125547926E0,15[&rate=2.2676083374627897E-4]:2.012806963766E1)[&rate=8.67989763853159E-4]:9.872108264778E1,(14[&rate=0.0013676113136323678]:4.245714471267E1,24[&rate=9.80288710297613E-4]:4.245714471267E1)[&rate=8.020875789748006E-4]:7.639200757277E1)[&rate=5.633341908903434E-4]:6.884003169277E0,((((12[&rate=6.390353822594545E-4]:7.567921348753E1,((16[&rate=5.633341908903434E-4]:3.876191691889E1,((22[&rate=3.447167184332075E-4]:3.468309035193E0,21[&rate=3.07916205099355E-4]:3.468309035193E0)[&rate=7.638194289318662E-4]:4.390084770045E0,20[&rate=4.424107250105804E-4]:7.858393805238E0)[&rate=0.0016812837993772415]:3.090352311365E1)[&rate=9.80288710297613E-4]:3.528551690521E1,(((((3[&rate=4.424107250105804E-4]:2.171815157335E0,4[&rate=2.470891429183894E-4]:2.171815157335E0)[&rate=3.2067368401077776E-4]:4.723965727751E-1,2[&rate=2.0099040236757344E-4]:2.64421173011E0)[&rate=7.460135929861184E-4]:8.783333965784E0,5[&rate=3.447167184332075E-4]:1.142754569589E1)[&rate=5.066097019294435E-4]:2.771749475436E0,((7[&rate=3.6743046800013373E-4]:9.59617105114E0,6[&rate=6.125877263206706E-4]:9.59617105114E0)[&rate=2.470891429183894E-4]:1.27801552066E0,1[&rate=3.6743046800013373E-4]:1.08741865718E1)[&rate=6.390353822594545E-4]:3.32510859953E0)[&rate=6.125877263206706E-4]:5.906595491277E1,((30[&rate=8.446845102300667E-4]:4.880507558075E1,26[&rate=6.968735921907402E-4]:4.880507558075E1)[&rate=2.470891429183894E-4]:1.504868501029E1,32[&rate=4.957080547027265E-4]:6.385376059104E1)[&rate=6.968735921907402E-4]:9.411489493062E0)[&rate=6.670261269058315E-4]:7.821837400018E-1)[&rate=0.0012063415462943848]:1.631779663423E0)[&rate=5.516302283112064E-4]:1.482976541483E0,25[&rate=5.874260512070298E-4]:7.716219002901E1)[&rate=4.957080547027265E-4]:4.90155812249E-1,((((11[&rate=8.020875789748006E-4]:1.801527753452E1,29[&rate=7.460135929861184E-4]:1.801527753452E1)[&rate=8.446845102300667E-4]:5.128338566482E1,(33[&rate=0.001053787461148689]:5.221393998245E1,13[&rate=4.424107250105804E-4]:5.221393998245E1)[&rate=5.874260512070298E-4]:1.708472321689E1)[&rate=4.424107250105804E-4]:1.226723825238E0,(19[&rate=0.001053787461148689]:1.700916822088E1,18[&rate=6.125877263206706E-4]:1.700916822088E1)[&rate=4.424107250105804E-4]:5.35162188037E1)[&rate=2.2676083374627897E-4]:5.026086317692E0,((10[&rate=0.001053787461148689]:1.856373185197E1,31[&rate=5.401255454026521E-4]:1.856373185197E1)[&rate=3.2067368401077776E-4]:5.691282458383E1,23[&rate=2.6451651703730784E-4]:7.54765564358E1)[&rate=6.670261269058315E-4]:7.491690647019E-2)[&rate=5.287999956060568E-4]:2.100872498988E0)[&rate=3.447167184332075E-4]:1.890025224509E0,(17[&rate=7.638194289318662E-4]:7.079170717013E1,(27[&rate=3.2067368401077776E-4]:3.44566390445E1,28[&rate=8.227753045637104E-4]:3.44566390445E1)[&rate=8.929037701224505E-4]:3.633506812563E1)[&rate=5.633341908903434E-4]:8.750663895632E0)[&rate=0.0016812837993772415]:4.619078438895E1); +tree STATE_800000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55148.49088986089,EEF_ucld_branchRates=-266.168517335019,lnP=-55148.49088986089,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.6600320265904705E-4]:9.926514079946E0,9[&rate=5.665981447146745E-4]:9.926514079946E0)[&rate=7.29144087000873E-4]:9.2506669721E0,15[&rate=3.781369414639386E-4]:1.917718105205E1)[&rate=8.662676960153982E-4]:9.556696535738E1,(14[&rate=0.001379822144774771]:4.265043410438E1,24[&rate=0.001050071864526156]:4.265043410438E1)[&rate=6.122605519141992E-4]:7.209371230505E1)[&rate=9.336753111654173E-4]:1.212100040707E1,((((((11[&rate=6.740167127410072E-4]:1.287342329804E1,29[&rate=4.906796778770233E-4]:1.287342329804E1)[&rate=9.097806469356501E-4]:5.512980958064E1,(33[&rate=8.662676960153982E-4]:5.817699066747E1,13[&rate=3.781369414639386E-4]:5.817699066747E1)[&rate=5.336952283928252E-4]:9.826242211204E0)[&rate=7.29144087000873E-4]:5.01393375628E-1,(19[&rate=6.122605519141992E-4]:1.624224105588E1,18[&rate=5.777848454341919E-4]:1.624224105588E1)[&rate=5.777848454341919E-4]:5.226238519843E1)[&rate=4.139162136281174E-4]:7.068940843276E0,((10[&rate=8.873768033140352E-4]:1.870079887015E1,31[&rate=4.906796778770233E-4]:1.870079887015E1)[&rate=4.906796778770233E-4]:5.639164562231E1,23[&rate=3.0631017123191256E-4]:7.509244449246E1)[&rate=5.445713271878738E-4]:4.811226051216E-1)[&rate=3.6539181228348804E-4]:2.708625517726E0,(25[&rate=6.241231135788983E-4]:7.716705877659E1,(12[&rate=7.440032101561017E-4]:7.613830177175E1,((((((3[&rate=7.007982057004645E-4]:2.719886227281E0,4[&rate=2.8776966993385226E-4]:2.719886227281E0)[&rate=8.873768033140352E-4]:3.710563434871E-1,2[&rate=8.092264283029301E-4]:3.090942570768E0)[&rate=8.092264283029301E-4]:1.047001729765E1,5[&rate=2.3817093822343883E-4]:1.356095986841E1)[&rate=0.0012963035526124492]:1.70806065955E0,((7[&rate=2.8776966993385226E-4]:9.794519599967E0,6[&rate=4.252773511528652E-4]:9.794519599967E0)[&rate=6.485326580780604E-4]:9.363293119524E-1,1[&rate=7.753364589214605E-4]:1.073084891192E1)[&rate=1.9294741709664355E-4]:4.538171616045E0)[&rate=5.121272946735993E-4]:5.494626770865E1,((30[&rate=8.092264283029301E-4]:4.956595824722E1,26[&rate=5.555329879645703E-4]:4.956595824722E1)[&rate=4.906796778770233E-4]:9.947328563267E0,32[&rate=4.906796778770233E-4]:5.951328681049E1)[&rate=3.22824638407558E-4]:1.070200142613E1)[&rate=6.122605519141992E-4]:3.832241928341E0,(16[&rate=3.9041287502112975E-4]:4.250639929542E1,((22[&rate=5.891114502999446E-4]:4.14436950977E0,21[&rate=8.462921529322135E-4]:4.14436950977E0)[&rate=4.252773511528652E-4]:4.199139449549E0,20[&rate=3.9041287502112975E-4]:8.343508959319E0)[&rate=0.0010866991263098957]:3.41628903361E1)[&rate=0.0010866991263098957]:3.154113086954E1)[&rate=0.001017053966644327]:2.090771606788E0)[&rate=0.002057923185208387]:1.028757004842E0)[&rate=2.8776966993385226E-4]:1.11513383872E0)[&rate=6.740167127410072E-4]:4.748221139495E0,(17[&rate=6.485326580780604E-4]:7.406777780634E1,(27[&rate=6.611273070934404E-4]:2.714531365913E1,28[&rate=0.0010866991263098957]:2.714531365913E1)[&rate=8.873768033140352E-4]:4.692246414721E1)[&rate=6.611273070934404E-4]:8.962635948462E0)[&rate=0.0016671679850240426]:4.38347330617E1); +tree STATE_810000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55130.41961333657,EEF_ucld_branchRates=-266.168517335019,lnP=-55130.41961333657,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.265597592001004E-4]:8.894066579974E0,9[&rate=4.942008716248169E-4]:8.894066579974E0)[&rate=4.942008716248169E-4]:7.413297552034E0,15[&rate=6.10615555232763E-4]:1.630736413201E1)[&rate=8.701281634825918E-4]:1.05429721927E2,(14[&rate=0.0014487090019437137]:5.06709934125E1,24[&rate=8.146421786052459E-4]:5.06709934125E1)[&rate=8.146421786052459E-4]:7.106609264646E1)[&rate=4.751169591625182E-4]:5.833296334621E0,((((((11[&rate=8.505166446613319E-4]:1.634423124338E1,29[&rate=5.705675442978731E-4]:1.634423124338E1)[&rate=8.146421786052459E-4]:5.602972737291E1,(33[&rate=8.146421786052459E-4]:5.777494628604E1,13[&rate=4.3578784528673376E-4]:5.777494628604E1)[&rate=3.0911402456563987E-4]:1.459901233025E1)[&rate=7.82343550272916E-4]:8.155563134595E-1,(19[&rate=5.903294744818761E-4]:1.638856103265E1,18[&rate=6.315659485059258E-4]:1.638856103265E1)[&rate=3.0911402456563987E-4]:5.680095389711E1)[&rate=9.380981198301507E-4]:2.853521681698E0,((10[&rate=8.505166446613319E-4]:1.703364988461E1,31[&rate=7.672816849567449E-4]:1.703364988461E1)[&rate=3.0911402456563987E-4]:5.806754549172E1,23[&rate=5.416248355097677E-4]:7.510119537633E1)[&rate=3.265597592001004E-4]:9.418412351273E-1)[&rate=3.93015342484971E-4]:2.437479239093E0,(25[&rate=6.423383786150817E-4]:7.682180135581E1,(12[&rate=6.315659485059258E-4]:7.577173523112E1,((((((3[&rate=5.705675442978731E-4]:2.936515268322E0,4[&rate=8.505166446613319E-4]:2.936515268322E0)[&rate=2.1750220322459818E-4]:2.172176350139E-1,2[&rate=0.0010274124997002878]:3.153732903336E0)[&rate=4.0421281044251186E-4]:8.987374165034E0,5[&rate=7.389536873156429E-4]:1.214110706837E1)[&rate=4.8468639813685797E-4]:2.457582565629E0,((7[&rate=6.423383786150817E-4]:9.212323691408E0,6[&rate=7.672816849567449E-4]:9.212323691408E0)[&rate=4.0421281044251186E-4]:7.637319843259E-1,1[&rate=4.942008716248169E-4]:9.976055675733E0)[&rate=6.003985464770884E-4]:4.622633958265E0)[&rate=6.423383786150817E-4]:5.726832544213E1,((30[&rate=9.943565750886703E-4]:5.150924347901E1,26[&rate=6.879378317525299E-4]:5.150924347901E1)[&rate=5.8039128041587E-4]:1.133732447301E1,32[&rate=3.93015342484971E-4]:6.284656795201E1)[&rate=4.3578784528673376E-4]:9.020447124121E0)[&rate=4.1502840590154513E-4]:2.823845134801E0,(16[&rate=5.22614015543845E-4]:4.151054091098E1,((22[&rate=0.001161169638341848]:3.754401843862E0,21[&rate=3.41991848716285E-4]:3.754401843862E0)[&rate=5.511999195063704E-4]:3.773258461487E0,20[&rate=4.255342167536232E-4]:7.527660305349E0)[&rate=0.0012267035700506072]:3.398288060563E1)[&rate=9.943565750886703E-4]:3.318031929996E1)[&rate=6.761103258563157E-4]:1.080875020185E0)[&rate=6.003985464770884E-4]:1.050066124693E0)[&rate=5.8039128041587E-4]:1.658714494734E0)[&rate=2.6174426815780483E-4]:2.166873964637E0,(17[&rate=7.126296315507377E-4]:7.250086945452E1,(27[&rate=6.315659485059258E-4]:2.824953325732E1,28[&rate=9.648256352788107E-4]:2.824953325732E1)[&rate=7.126296315507377E-4]:4.42513361972E1)[&rate=5.131462011710763E-4]:8.146520360661E0)[&rate=0.0017433905122138903]:4.69229925784E1); +tree STATE_820000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.955186247586,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.955186247586,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.332124228843848E-4]:9.671723702351E0,9[&rate=7.15706527610776E-4]:9.671723702351E0)[&rate=6.102503340531109E-4]:7.133002417043E0,15[&rate=6.607756500971294E-4]:1.680472611939E1)[&rate=8.059917556661829E-4]:1.02212722988E2,(14[&rate=0.001464088097147455]:4.678857155303E1,24[&rate=8.059917556661829E-4]:4.678857155303E1)[&rate=9.070602582417531E-4]:7.222887755433E1)[&rate=0.001464088097147455]:9.038283451343E0,((((((11[&rate=6.503944520359247E-4]:1.811364166732E1,29[&rate=6.82079340325357E-4]:1.811364166732E1)[&rate=6.82079340325357E-4]:5.058839860866E1,(33[&rate=7.780128107971794E-4]:5.775241941031E1,13[&rate=4.941235496436815E-4]:5.775241941031E1)[&rate=4.4148563767205994E-4]:1.094962086567E1)[&rate=8.697517395669828E-4]:9.945467141455E-1,(19[&rate=6.401685688969046E-4]:1.416053220303E1,18[&rate=6.82079340325357E-4]:1.416053220303E1)[&rate=5.619544134326854E-4]:5.55360547871E1)[&rate=2.9353753896431086E-4]:5.446498337626E0,((10[&rate=4.6332216547537294E-4]:2.08418014719E1,31[&rate=9.73451410853909E-4]:2.08418014719E1)[&rate=3.215896434224814E-4]:5.279972037313E1,23[&rate=4.4148563767205994E-4]:7.364152184502E1)[&rate=7.15706527610776E-4]:1.501563482728E0)[&rate=8.059917556661829E-4]:2.93868305548E0,(25[&rate=5.907753665099115E-4]:7.683234830405E1,(12[&rate=8.697517395669828E-4]:7.580075463174E1,((((((3[&rate=4.7379963233827615E-4]:2.778209455231E0,4[&rate=3.613304746577767E-4]:2.778209455231E0)[&rate=6.102503340531109E-4]:6.029932490343E-1,2[&rate=5.332124228843848E-4]:3.381202704266E0)[&rate=6.201130693515213E-4]:8.301898303005E0,5[&rate=4.2998977579412385E-4]:1.168310100727E1)[&rate=7.042434766224994E-4]:3.186825728126E0,((7[&rate=4.525710667891741E-4]:7.633961865648E0,6[&rate=7.647681139087352E-4]:7.633961865648E0)[&rate=5.428132773334261E-4]:1.496039248489E0,1[&rate=6.713307052924297E-4]:9.130001114137E0)[&rate=3.613304746577767E-4]:5.739925621259E0)[&rate=4.7379963233827615E-4]:5.627095831806E1,((30[&rate=9.994768272568715E-4]:5.131486301914E1,26[&rate=5.907753665099115E-4]:5.131486301914E1)[&rate=8.363600110592104E-4]:1.054060934572E1,32[&rate=3.918821856078136E-4]:6.185547236486E1)[&rate=5.428132773334261E-4]:9.285412688597E0)[&rate=4.6332216547537294E-4]:2.395154919964E0,(16[&rate=3.613304746577767E-4]:4.063307981662E1,((22[&rate=7.647681139087352E-4]:3.681246959657E0,21[&rate=3.215896434224814E-4]:3.681246959657E0)[&rate=5.332124228843848E-4]:5.57271954453E0,20[&rate=8.526296622326537E-4]:9.253966504187E0)[&rate=0.001464088097147455]:3.137911331243E1)[&rate=0.0010602503380606546]:3.29029601568E1)[&rate=0.0010602503380606546]:2.264714658324E0)[&rate=0.0010602503380606546]:1.031593672302E0)[&rate=3.613304746577767E-4]:1.249420079184E0)[&rate=8.697517395669828E-4]:4.421067886137E0,(17[&rate=8.87846604280551E-4]:7.310657463236E1,(27[&rate=6.102503340531109E-4]:2.233426528246E1,28[&rate=8.526296622326537E-4]:2.233426528246E1)[&rate=6.102503340531109E-4]:5.07723093499E1)[&rate=6.503944520359247E-4]:9.396261637006E0)[&rate=0.0011893954343890954]:4.555289628934E1); +tree STATE_830000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55126.8531958235,EEF_ucld_branchRates=-266.168517335019,lnP=-55126.8531958235,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.958942865018653E-4]:7.980119830523E0,9[&rate=9.409357824418734E-4]:7.980119830523E0)[&rate=6.610092205557259E-4]:9.223074287036E0,15[&rate=5.640136042441317E-4]:1.720319411756E1)[&rate=7.215697147735745E-4]:1.03177976948E2,(14[&rate=0.001248797926431693]:5.101128745215E1,24[&rate=6.722214893654888E-4]:5.101128745215E1)[&rate=7.497794765887603E-4]:6.936988361345E1)[&rate=7.353173396272015E-4]:8.822578757667E0,((((((11[&rate=3.9537745351246215E-4]:1.765872030356E1,29[&rate=5.382771944612292E-4]:1.765872030356E1)[&rate=5.909167208060052E-4]:5.419026786031E1,(33[&rate=7.985752942302799E-4]:6.316680123389E1,13[&rate=4.1353642275682276E-4]:6.316680123389E1)[&rate=4.724598795905389E-4]:8.682186929977E0)[&rate=3.1712040905343885E-4]:1.253812802757E0,(19[&rate=5.298892934733114E-4]:1.589259478781E1,18[&rate=3.7604225355936045E-4]:1.589259478781E1)[&rate=5.640136042441317E-4]:5.721020617881E1)[&rate=4.0457609240361424E-4]:2.081218457384E0,((10[&rate=7.497794765887603E-4]:1.945417539857E1,31[&rate=8.591706622637619E-4]:1.945417539857E1)[&rate=3.3088217628321384E-4]:5.288462770702E1,23[&rate=6.097207020583551E-4]:7.233880310559E1)[&rate=3.1712040905343885E-4]:2.845216318423E0)[&rate=5.909167208060052E-4]:3.054949333202E0,(25[&rate=6.194411577770008E-4]:7.58509417795E1,(12[&rate=7.497794765887603E-4]:7.475059929462E1,((((((2[&rate=2.829135888180607E-4]:2.001651737464E0,4[&rate=6.097207020583551E-4]:2.001651737464E0)[&rate=5.817931495393205E-4]:9.191328349034E-1,3[&rate=6.722214893654888E-4]:2.920784572367E0)[&rate=8.372491380981624E-4]:1.021254595552E1,5[&rate=4.309059958531765E-4]:1.313333052788E1)[&rate=5.298892934733114E-4]:1.191963161146E0,((7[&rate=2.587163745161979E-4]:7.672308163403E0,6[&rate=4.5604259774885127E-4]:7.672308163403E0)[&rate=3.1712040905343885E-4]:8.614395739519E-1,1[&rate=2.829135888180607E-4]:8.533747737355E0)[&rate=7.650569687331224E-4]:5.791545951675E0)[&rate=5.215741123647838E-4]:5.790429613034E1,(16[&rate=3.7604225355936045E-4]:3.726786587316E1,((22[&rate=5.382771944612292E-4]:4.601106475017E0,21[&rate=8.833351477230477E-4]:4.601106475017E0)[&rate=5.553253287454143E-4]:4.338651081466E0,20[&rate=4.1353642275682276E-4]:8.939757556483E0)[&rate=0.001248797926431693]:2.832810831667E1)[&rate=6.958942865018653E-4]:3.496172394621E1)[&rate=9.409357824418734E-4]:4.426704831428E-1,((30[&rate=4.5604259774885127E-4]:5.307649583204E1,26[&rate=7.497794765887603E-4]:5.307649583204E1)[&rate=5.05108814335137E-4]:1.197683243844E1,32[&rate=4.642723446600494E-4]:6.505332827048E1)[&rate=5.728309913069172E-4]:7.618932032031E0)[&rate=7.084523981412808E-4]:2.078338992111E0)[&rate=3.1712040905343885E-4]:1.100342484881E0)[&rate=3.8588809152273316E-4]:2.388026977709E0)[&rate=5.382771944612292E-4]:3.035731214114E0,(17[&rate=6.00219506518633E-4]:7.432933597559E1,(27[&rate=3.9537745351246215E-4]:2.231170885024E1,28[&rate=0.001248797926431693]:2.231170885024E1)[&rate=4.887745314023434E-4]:5.201762712535E1)[&rate=4.724598795905389E-4]:6.94536399574E0)[&rate=0.0010188069351768198]:4.792904985194E1); +tree STATE_840000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55144.44416435281,EEF_ucld_branchRates=-266.168517335019,lnP=-55144.44416435281,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.2709341303808607E-4]:8.862564492099E0,9[&rate=6.590233854011752E-4]:8.862564492099E0)[&rate=3.090904818443952E-4]:6.435572507619E0,15[&rate=4.054503643779172E-4]:1.529813699972E1)[&rate=7.464578118769488E-4]:1.035505049673E2,(14[&rate=0.001041848862190698]:5.602968209521E1,24[&rate=0.0011253537565541114]:5.602968209521E1)[&rate=9.776645644225662E-4]:6.281895987179E1)[&rate=6.154434763605601E-4]:5.708121989715E0,(((12[&rate=8.069311150300278E-4]:7.410711948232E1,(((16[&rate=3.423697808295355E-4]:3.636684338621E1,((22[&rate=8.605659383924514E-4]:3.226450022258E0,21[&rate=8.238527819250804E-4]:3.226450022258E0)[&rate=4.8720247463739737E-4]:4.391682484925E0,20[&rate=7.754141344016944E-4]:7.618132507183E0)[&rate=0.0014749735041676374]:2.874871087903E1)[&rate=9.021144022016739E-4]:3.527653971936E1,((30[&rate=6.590233854011752E-4]:5.250496470243E1,26[&rate=6.478002461523801E-4]:5.250496470243E1)[&rate=8.806436433972298E-4]:9.872273792052E0,32[&rate=3.940892745915221E-4]:6.237723849448E1)[&rate=6.705037937248048E-4]:9.266144611098E0)[&rate=7.754141344016944E-4]:6.002056453568E-1,((((2[&rate=5.746233244211279E-4]:1.572489287693E0,4[&rate=6.26031688995276E-4]:1.572489287693E0)[&rate=3.090904818443952E-4]:1.342299537303E0,3[&rate=0.0014749735041676374]:2.914788824996E0)[&rate=4.968791538529423E-4]:1.036002202714E1,5[&rate=4.2709341303808607E-4]:1.327481085214E1)[&rate=3.267443624322006E-4]:1.688030205171E0,((7[&rate=2.8820325930562786E-4]:6.426396140429E0,6[&rate=5.84633455385783E-4]:6.426396140429E0)[&rate=6.154434763605601E-4]:2.047644163152E0,1[&rate=3.267443624322006E-4]:8.474040303581E0)[&rate=6.154434763605601E-4]:6.488800753725E0)[&rate=4.375062738212885E-4]:5.728074769363E1)[&rate=5.746233244211279E-4]:1.863530731389E0)[&rate=3.940892745915221E-4]:2.863560522828E0,(25[&rate=5.746233244211279E-4]:7.545450627256E1,((((33[&rate=8.238527819250804E-4]:5.847092397313E1,13[&rate=4.1642749394991984E-4]:5.847092397313E1)[&rate=6.478002461523801E-4]:5.185586080307E0,(11[&rate=4.5775528702109093E-4]:1.903425990287E1,29[&rate=4.968791538529423E-4]:1.903425990287E1)[&rate=7.606505257399739E-4]:4.462225015057E1)[&rate=0.001080448254495473]:2.504022924123E0,(19[&rate=5.647155477906082E-4]:1.168762330278E1,18[&rate=7.908151929521237E-4]:1.168762330278E1)[&rate=2.8820325930562786E-4]:5.447290967478E1)[&rate=4.968791538529423E-4]:7.121211554284E0,((10[&rate=5.947622299860868E-4]:1.721873299323E1,31[&rate=8.416879715239063E-4]:1.721873299323E1)[&rate=4.054503643779172E-4]:5.383801022516E1,23[&rate=4.968791538529423E-4]:7.105674321839E1)[&rate=3.565993256817649E-4]:2.225001313454E0)[&rate=6.26031688995276E-4]:2.172761740712E0)[&rate=8.416879715239063E-4]:1.51617373259E0)[&rate=5.25789489947982E-4]:2.776556770632E0,(17[&rate=7.195614917453526E-4]:7.240339017716E1,(27[&rate=9.776645644225662E-4]:1.851083432923E1,28[&rate=0.0014749735041676374]:1.851083432923E1)[&rate=6.705037937248048E-4]:5.389255584793E1)[&rate=5.548941494134532E-4]:7.343846598626E0)[&rate=0.0011791699055467945]:4.480952718093E1); +tree STATE_850000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55145.76743416705,EEF_ucld_branchRates=-266.168517335019,lnP=-55145.76743416705,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.284586511296035E-4]:8.988874526607E0,9[&rate=0.0010471110139599945]:8.988874526607E0)[&rate=5.908358205426717E-4]:7.928595389068E0,15[&rate=3.460062796952484E-4]:1.691746991568E1)[&rate=8.125679624771528E-4]:9.921611174144E1,(14[&rate=9.421785681549233E-4]:5.130690722185E1,24[&rate=0.0012070475179313683]:5.130690722185E1)[&rate=7.410352212910093E-4]:6.482667443527E1)[&rate=9.000792418668197E-4]:1.200611009043E1,((((((33[&rate=7.153337011779748E-4]:5.842881509979E1,13[&rate=3.627281830402541E-4]:5.842881509979E1)[&rate=6.337412372369671E-4]:1.071371659715E1,(11[&rate=5.180614876118372E-4]:2.034846120923E1,29[&rate=6.560099401022837E-4]:2.034846120923E1)[&rate=6.228379023599891E-4]:4.879407048771E1)[&rate=8.625345666663701E-4]:2.665594421781E0,(19[&rate=0.0010471110139599945]:1.51406130555E1,18[&rate=7.029600340048602E-4]:1.51406130555E1)[&rate=3.460062796952484E-4]:5.666751306321E1)[&rate=5.284586511296035E-4]:5.095848167399E0,((10[&rate=6.674139007013036E-4]:2.856364207015E1,31[&rate=5.284586511296035E-4]:2.856364207015E1)[&rate=4.8643511888398524E-4]:4.521779247635E1,23[&rate=5.388228102025428E-4]:7.378143454651E1)[&rate=6.908658097291864E-4]:3.122539739603E0)[&rate=5.908358205426717E-4]:3.079034066281E0,((12[&rate=6.790250871653466E-4]:7.763060079507E1,((((((2[&rate=4.5352658208501766E-4]:1.910014604064E0,4[&rate=8.125679624771528E-4]:1.910014604064E0)[&rate=3.2712355195446647E-4]:6.65789620126E-1,3[&rate=8.808114590305644E-4]:2.57580422419E0)[&rate=3.047968895958437E-4]:1.095785793515E1,5[&rate=3.2712355195446647E-4]:1.353366215934E1)[&rate=0.0011583937692474851]:1.783660033855E0,((7[&rate=4.6469975843316035E-4]:6.501123400863E0,1[&rate=4.054427798861477E-4]:6.501123400863E0)[&rate=4.5352658208501766E-4]:1.690132196315E0,6[&rate=7.824908990682705E-4]:8.191255597178E0)[&rate=6.120642048620072E-4]:7.126066596018E0)[&rate=4.054427798861477E-4]:5.838444479636E1,((30[&rate=9.653902776980304E-4]:5.40607752468E1,26[&rate=8.285040884213225E-4]:5.40607752468E1)[&rate=3.2712355195446647E-4]:1.426443361425E1,32[&rate=4.4208479377401443E-4]:6.832520886104E1)[&rate=6.560099401022837E-4]:5.376558128517E0)[&rate=8.808114590305644E-4]:2.444804418705E0,(16[&rate=4.1813155165534464E-4]:3.97711590757E1,((22[&rate=6.560099401022837E-4]:3.541575892245E0,21[&rate=5.595338598108015E-4]:3.541575892245E0)[&rate=7.029600340048602E-4]:4.183779224866E0,20[&rate=6.120642048620072E-4]:7.72535511711E0)[&rate=0.0015864841418225762]:3.204580395859E1)[&rate=9.000792418668197E-4]:3.637541233256E1)[&rate=0.001079881489430989]:1.484029386803E0)[&rate=0.0012070475179313683]:1.401657878161E0,25[&rate=8.625345666663701E-4]:7.903225867323E1)[&rate=3.627281830402541E-4]:9.50749679163E-1)[&rate=8.285040884213225E-4]:5.02117290093E0,(17[&rate=7.029600340048602E-4]:7.96764124044E1,(27[&rate=8.125679624771528E-4]:2.269779704707E1,28[&rate=0.0015864841418225762]:2.269779704707E1)[&rate=4.1813155165534464E-4]:5.697861535733E1)[&rate=6.228379023599891E-4]:5.327768848926E0)[&rate=0.0015864841418225762]:4.313551049422E1); +tree STATE_860000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55170.77524687989,EEF_ucld_branchRates=-266.168517335019,lnP=-55170.77524687989,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.181441473373404E-4]:8.643046945439E0,9[&rate=0.0011114573713762303]:8.643046945439E0)[&rate=7.879537406003574E-4]:6.830200412719E0,15[&rate=4.07653690060317E-4]:1.547324735816E1)[&rate=0.001040883435454918]:1.008894789071E2,(14[&rate=6.015544325699574E-4]:5.413104259968E1,24[&rate=8.723765234415095E-4]:5.413104259968E1)[&rate=8.195083886943869E-4]:6.223168366557E1)[&rate=0.001203480848777209]:8.3702895287E0,((((((33[&rate=6.80744152593466E-4]:5.217446565937E1,13[&rate=5.697402479751621E-4]:5.217446565937E1)[&rate=5.385087366455795E-4]:1.221147777036E1,(11[&rate=6.456916681311206E-4]:1.769990105312E1,29[&rate=4.757655363579858E-4]:1.769990105312E1)[&rate=8.363067470191372E-4]:4.668604237661E1)[&rate=0.0012629029060311117]:1.457233620033E0,(19[&rate=0.001040883435454918]:1.220930905836E1,18[&rate=0.001590966210042635]:1.220930905836E1)[&rate=3.359878034641279E-4]:5.36338679914E1)[&rate=3.950253703701702E-4]:7.174453643161E0,((10[&rate=8.363067470191372E-4]:2.595668151615E1,31[&rate=6.233178379414697E-4]:2.595668151615E1)[&rate=5.177738010246233E-4]:4.587191393958E1,23[&rate=6.57155720491178E-4]:7.182859545573E1)[&rate=5.488835383934112E-4]:1.189035237192E0)[&rate=3.950253703701702E-4]:1.683411940597E0,((12[&rate=8.723765234415095E-4]:7.161167195238E1,(((((3[&rate=8.034152436866808E-4]:2.446779982123E0,4[&rate=6.80744152593466E-4]:2.446779982123E0)[&rate=3.172750663084734E-4]:2.173816790411E-1,2[&rate=3.950253703701702E-4]:2.664161661164E0)[&rate=6.344190366544029E-4]:9.231061813347E0,5[&rate=5.177738010246233E-4]:1.189522347451E1)[&rate=5.177738010246233E-4]:1.898716759649E0,((7[&rate=4.3151472429608267E-4]:6.561734766604E0,1[&rate=3.172750663084734E-4]:6.561734766604E0)[&rate=6.929154389883743E-4]:1.120006636176E0,6[&rate=7.053725322463002E-4]:7.68174140278E0)[&rate=2.9517897289237685E-4]:6.11219883138E0)[&rate=3.5257725440083695E-4]:5.728669098157E1,((16[&rate=4.540677750036977E-4]:3.371623632415E1,((22[&rate=8.034152436866808E-4]:2.562328136128E0,21[&rate=5.908562716261161E-4]:2.562328136128E0)[&rate=3.359878034641279E-4]:4.682830450327E0,20[&rate=6.456916681311206E-4]:7.245158586456E0)[&rate=9.344859880937415E-4]:2.647107773769E1)[&rate=8.195083886943869E-4]:3.446424341676E1,((30[&rate=8.918678234536541E-4]:5.069620361515E1,26[&rate=4.540677750036977E-4]:5.069620361515E1)[&rate=6.123690561799942E-4]:1.118488133007E1,32[&rate=6.123690561799942E-4]:6.188108494522E1)[&rate=3.359878034641279E-4]:6.299394795687E0)[&rate=8.723765234415095E-4]:2.900151474817E0)[&rate=0.001590966210042635]:5.310407366502E-1)[&rate=3.172750663084734E-4]:2.215200017155E0,25[&rate=5.697402479751621E-4]:7.382687196953E1)[&rate=7.053725322463002E-4]:8.741706639868E-1)[&rate=8.538959373696803E-4]:6.142454825351E0,(17[&rate=9.833267545575365E-4]:7.125363573393E1,(27[&rate=7.053725322463002E-4]:2.093605283186E1,28[&rate=0.001203480848777209]:2.093605283186E1)[&rate=5.073736100997251E-4]:5.031758290206E1)[&rate=4.429222146975695E-4]:9.589861724944E0)[&rate=0.001590966210042635]:4.388951833508E1); +tree STATE_870000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55144.54150481558,EEF_ucld_branchRates=-266.168517335019,lnP=-55144.54150481558,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.108844231103969E-4]:7.955882687067E0,9[&rate=7.348718044447107E-4]:7.955882687067E0)[&rate=7.494268552672629E-4]:5.657522898089E0,15[&rate=7.803986358025438E-4]:1.361340558516E1)[&rate=7.969658964307591E-4]:1.003067745303E2,(14[&rate=0.001039896461485491]:4.792907794861E1,24[&rate=8.950853810921544E-4]:4.792907794861E1)[&rate=9.18970292372757E-4]:6.599110216682E1)[&rate=4.8101491702899206E-4]:8.2444271805E0,((((((33[&rate=8.327423379615736E-4]:5.557398785595E1,13[&rate=4.3155844893080406E-4]:5.557398785595E1)[&rate=5.904913645567397E-4]:9.642669307268E0,(11[&rate=2.4625055767745364E-4]:1.858762646732E1,29[&rate=4.3155844893080406E-4]:1.858762646732E1)[&rate=6.691886824036259E-4]:4.66290306959E1)[&rate=8.143761741214832E-4]:1.783851581137E0,(19[&rate=6.691886824036259E-4]:1.183730052356E1,18[&rate=7.803986358025438E-4]:1.183730052356E1)[&rate=2.934137251783608E-4]:5.51632082208E1)[&rate=2.934137251783608E-4]:7.649717365423E0,((10[&rate=5.697810568202703E-4]:2.803638106574E1,31[&rate=7.494268552672629E-4]:2.803638106574E1)[&rate=2.934137251783608E-4]:4.503702719086E1,23[&rate=6.454655406327056E-4]:7.30734082566E1)[&rate=5.904913645567397E-4]:1.576817853175E0)[&rate=3.6606049984949906E-4]:1.858445220136E0,(((12[&rate=8.143761741214832E-4]:6.964625469802E1,((30[&rate=7.969658964307591E-4]:4.907880463414E1,26[&rate=7.969658964307591E-4]:4.907880463414E1)[&rate=5.697810568202703E-4]:1.076849126568E1,32[&rate=4.002023144112605E-4]:5.984729589982E1)[&rate=5.004601287712626E-4]:9.798958798202E0)[&rate=4.8101491702899206E-4]:2.198775843852E0,(((((3[&rate=6.454655406327056E-4]:2.285714804425E0,4[&rate=5.495819752387034E-4]:2.285714804425E0)[&rate=4.416420555522912E-4]:3.375925370235E-1,2[&rate=3.108844231103969E-4]:2.623307341449E0)[&rate=0.0011268265720498088]:9.740736549966E0,5[&rate=3.6606049984949906E-4]:1.236404389141E1)[&rate=6.691886824036259E-4]:1.159316423671E0,((7[&rate=3.6606049984949906E-4]:7.820966364996E0,1[&rate=3.2638033838140073E-4]:7.820966364996E0)[&rate=6.340234452907275E-4]:1.263130797375E0,6[&rate=5.800637825216852E-4]:9.08409716237E0)[&rate=6.571782513638765E-4]:4.439263152715E0)[&rate=4.8101491702899206E-4]:5.826423059292E1,(16[&rate=5.297620622883042E-4]:3.779962479098E1,((22[&rate=0.0013481621073408816]:2.500003858253E0,21[&rate=6.118536497275481E-4]:2.500003858253E0)[&rate=2.934137251783608E-4]:4.849467472039E0,20[&rate=5.697810568202703E-4]:7.349471330292E0)[&rate=0.0011829928119369655]:3.045015346069E1)[&rate=0.0014934952487071801]:3.398796611703E1)[&rate=3.7787319673645604E-4]:5.743963386595E-2)[&rate=0.0010800447091355203]:2.76819223881E0,25[&rate=4.21317975242315E-4]:7.461322278069E1)[&rate=4.7126432698663015E-4]:1.895448549227E0)[&rate=5.396326928710295E-4]:3.70669900166E0,(17[&rate=6.010817097299917E-4]:7.110267934528E1,(27[&rate=5.101922380876828E-4]:2.324542241963E1,28[&rate=9.732736829684972E-4]:2.324542241963E1)[&rate=7.348718044447107E-4]:4.785725692565E1)[&rate=9.732736829684972E-4]:9.112690986297E0)[&rate=0.0018151640084546265]:4.194923696436E1); +tree STATE_880000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55157.80368613177,EEF_ucld_branchRates=-266.168517335019,lnP=-55157.80368613177,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.117182974010031E-4]:7.383011542234E0,9[&rate=0.0011104012474308879]:7.383011542234E0)[&rate=7.257358916776494E-4]:6.443260978966E0,15[&rate=2.658680798003727E-4]:1.38262725212E1)[&rate=4.15682302322828E-4]:1.03170832701E2,(14[&rate=0.0011104012474308879]:5.240223429657E1,24[&rate=7.887078956227078E-4]:5.240223429657E1)[&rate=9.793162499614867E-4]:6.459487092567E1)[&rate=5.354603777141023E-4]:1.269870438751E1,((((((33[&rate=7.556732536021662E-4]:5.609741844493E1,13[&rate=4.0606840718093913E-4]:5.609741844493E1)[&rate=3.5408450456804604E-4]:1.253920557694E1,(11[&rate=3.5408450456804604E-4]:1.838314327885E1,29[&rate=6.982464949994481E-4]:1.838314327885E1)[&rate=5.545056273430709E-4]:5.025348074302E1)[&rate=3.1663222400567286E-4]:1.642996624918E0,(19[&rate=3.6521334041135365E-4]:1.246936098496E1,18[&rate=7.556732536021662E-4]:1.246936098496E1)[&rate=4.802226915530229E-4]:5.781025966183E1)[&rate=5.545056273430709E-4]:5.676497148954E0,((10[&rate=3.019753552798212E-4]:2.581088973488E1,31[&rate=5.449257046076903E-4]:2.581088973488E1)[&rate=5.168120580563283E-4]:4.869721280062E1,23[&rate=4.802226915530229E-4]:7.45081025355E1)[&rate=2.854281020136761E-4]:1.448015260246E0)[&rate=2.854281020136761E-4]:4.335530790979E0,(((((((3[&rate=7.717539042060572E-4]:2.331176198389E0,4[&rate=4.5290467800543826E-4]:2.331176198389E0)[&rate=5.840955397205301E-4]:2.670083375337E-1,2[&rate=6.153385835184682E-4]:2.598184535922E0)[&rate=9.1813133336921E-4]:8.47549720254E0,5[&rate=6.262159165306775E-4]:1.107368173846E1)[&rate=6.982464949994481E-4]:2.183010863984E0,((7[&rate=3.019753552798212E-4]:7.015803277624E0,1[&rate=4.2514321595748617E-4]:7.015803277624E0)[&rate=5.075989532571396E-4]:7.577634835986E-1,6[&rate=5.354603777141023E-4]:7.773566761223E0)[&rate=6.373645778398758E-4]:5.483125841223E0)[&rate=4.802226915530229E-4]:5.943314540547E1,((30[&rate=5.840955397205301E-4]:5.123667143056E1,26[&rate=5.545056273430709E-4]:5.123667143056E1)[&rate=8.68181094431201E-4]:1.228111815729E1,32[&rate=4.15682302322828E-4]:6.351778958785E1)[&rate=3.299882593436986E-4]:9.172048420064E0)[&rate=4.620328345907906E-4]:3.028584999148E0,((16[&rate=2.658680798003727E-4]:3.536288475541E1,((22[&rate=5.642160621374303E-4]:2.965990172365E0,21[&rate=6.262159165306775E-4]:2.965990172365E0)[&rate=7.257358916776494E-4]:3.936571204618E0,20[&rate=2.854281020136761E-4]:6.902561376984E0)[&rate=0.001261203719708924]:2.846032337843E1)[&rate=7.403628787249424E-4]:3.969951318841E1,12[&rate=7.403628787249424E-4]:7.506239794382E1)[&rate=0.001261203719708924]:6.560250632391E-1)[&rate=6.373645778398758E-4]:2.487330119517E0,25[&rate=6.153385835184682E-4]:7.820575312658E1)[&rate=9.1813133336921E-4]:2.085895460143E0)[&rate=7.556732536021662E-4]:5.134637999888E0,(17[&rate=6.153385835184682E-4]:7.794101003836E1,(27[&rate=3.7589796854708236E-4]:2.247619665489E1,28[&rate=9.793162499614867E-4]:2.247619665489E1)[&rate=4.620328345907906E-4]:5.546481338347E1)[&rate=8.461871709151609E-4]:7.485276548251E0)[&rate=0.0016851881242011982]:4.426952302313E1); +tree STATE_890000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.606098843455,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.606098843455,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.918336287308795E-4]:8.478416193732E0,9[&rate=6.639279206747258E-4]:8.478416193732E0)[&rate=8.568924495181643E-4]:4.322871358967E0,15[&rate=6.028420142321957E-4]:1.28012875527E1)[&rate=8.171839914685901E-4]:1.027059985315E2,(14[&rate=0.0012518434347777]:5.161156317833E1,24[&rate=9.798010383990643E-4]:5.161156317833E1)[&rate=0.0010298204045832832]:6.389572290591E1)[&rate=3.764791629315091E-4]:9.909184582795E0,((((((33[&rate=7.931902660484254E-4]:5.99810205214E1,13[&rate=5.408553980551688E-4]:5.99810205214E1)[&rate=6.819382241949344E-4]:9.599088077016E0,(11[&rate=7.194677018811897E-4]:1.149131987741E1,29[&rate=8.568924495181643E-4]:1.149131987741E1)[&rate=6.462588680966214E-4]:5.808878872102E1)[&rate=4.44793041354612E-4]:1.160336512014E0,(19[&rate=5.767280971809501E-4]:1.376113875644E1,18[&rate=6.288185299355163E-4]:1.376113875644E1)[&rate=3.764791629315091E-4]:5.6979306354E1)[&rate=7.098556240374042E-4]:2.344605743065E0,((10[&rate=5.679144468930618E-4]:2.669893117301E1,31[&rate=4.153593321641355E-4]:2.669893117301E1)[&rate=5.941739184399428E-4]:4.557846763056E1,23[&rate=5.767280971809501E-4]:7.227739880357E1)[&rate=8.430797087493373E-4]:8.076520499289E-1)[&rate=9.384002540748842E-4]:4.579936885422E0,((12[&rate=8.298661374521401E-4]:7.530725677595E1,(((30[&rate=7.392633226221438E-4]:5.2879631128E1,26[&rate=3.764791629315091E-4]:5.2879631128E1)[&rate=6.375170443662108E-4]:1.304824673362E1,32[&rate=4.153593321641355E-4]:6.592787786163E1)[&rate=5.767280971809501E-4]:7.451037254396E0,((16[&rate=4.81008847690627E-4]:2.908838755594E1,((22[&rate=7.004082768833333E-4]:3.265696793873E0,21[&rate=5.408553980551688E-4]:3.265696793873E0)[&rate=6.639279206747258E-4]:3.797931351536E0,20[&rate=7.004082768833333E-4]:7.063628145408E0)[&rate=0.0010034835900562802]:2.202475941053E1)[&rate=8.171839914685901E-4]:4.244319416695E1,((((3[&rate=7.931902660484254E-4]:1.723851408008E0,4[&rate=0.0011346632468586867]:1.723851408008E0)[&rate=6.911080090910009E-4]:8.039436890888E-1,2[&rate=9.582365680495075E-4]:2.527795097097E0)[&rate=8.430797087493373E-4]:7.776369872838E0,5[&rate=4.81008847690627E-4]:1.030416496994E1)[&rate=7.292634449016973E-4]:2.278033156915E0,((7[&rate=4.153593321641355E-4]:7.372440745986E0,1[&rate=8.568924495181643E-4]:7.372440745986E0)[&rate=8.049753592624887E-4]:8.235312315438E-1,6[&rate=4.44793041354612E-4]:8.19597197753E0)[&rate=6.911080090910009E-4]:4.38622614932E0)[&rate=4.696568764218469E-4]:5.894938359604E1)[&rate=6.639279206747258E-4]:1.847333393132E0)[&rate=0.0010939088957497528]:1.928341659926E0)[&rate=8.298661374521401E-4]:8.357023619646E-1,25[&rate=6.114954201077676E-4]:7.614295913791E1)[&rate=5.315426239923827E-4]:1.522028601009E0)[&rate=5.315426239923827E-4]:1.8972803421E0,(17[&rate=9.199994915472741E-4]:6.969147751835E1,(27[&rate=6.550578534854667E-4]:2.489346528299E1,28[&rate=0.0011851024787387632]:2.489346528299E1)[&rate=7.292634449016973E-4]:4.479801223535E1)[&rate=3.976811937377634E-4]:9.870790562674E0)[&rate=0.001565624262773543]:4.585420258601E1); +tree STATE_900000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.440450455455,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.440450455455,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.9876777356994374E-4]:6.673335065518E0,9[&rate=7.177103300462284E-4]:6.673335065518E0)[&rate=8.468271760176716E-4]:4.675325963237E0,15[&rate=6.579384778710532E-4]:1.134866102875E1)[&rate=8.3042976377766E-4]:1.090407382358E2,(14[&rate=0.0013724596952645546]:4.692877444768E1,24[&rate=0.0010414157068002385]:4.692877444768E1)[&rate=9.877594155345715E-4]:7.34606248169E1)[&rate=8.146715735426241E-4]:5.744586598046E0,((((((33[&rate=8.639382931662171E-4]:5.745064349447E1,13[&rate=4.254113009507018E-4]:5.745064349447E1)[&rate=4.954096163865513E-4]:9.255510016514E0,(11[&rate=6.811797682650033E-4]:1.157944232543E1,29[&rate=4.3788898598514893E-4]:1.157944232543E1)[&rate=8.468271760176716E-4]:5.512671118556E1)[&rate=3.842815593803224E-4]:4.894147490619E0,(19[&rate=8.818497743199897E-4]:1.522865658275E1,18[&rate=6.579384778710532E-4]:1.522865658275E1)[&rate=3.515808227533738E-4]:5.637164441885E1)[&rate=0.00114358405584592]:2.487022005596E0,((10[&rate=3.515808227533738E-4]:2.191003609733E1,31[&rate=8.468271760176716E-4]:2.191003609733E1)[&rate=7.304296365936593E-4]:4.99810904381E1,23[&rate=5.385094866514385E-4]:7.189112653543E1)[&rate=0.00114358405584592]:2.196196471769E0)[&rate=3.842815593803224E-4]:2.650930963218E0,((12[&rate=8.818497743199897E-4]:7.277766870651E1,((((((3[&rate=3.322680217227513E-4]:1.678251071564E0,4[&rate=7.304296365936593E-4]:1.678251071564E0)[&rate=6.133757004470313E-4]:5.183968676446E-1,2[&rate=6.243236103704973E-4]:2.196647939209E0)[&rate=8.639382931662171E-4]:9.248735697713E0,5[&rate=6.353879117364672E-4]:1.144538363692E1)[&rate=4.843574792212399E-4]:8.59915648882E-1,((7[&rate=3.322680217227513E-4]:7.274416527613E0,1[&rate=3.0944259144528115E-4]:7.274416527613E0)[&rate=6.694627308166818E-4]:7.19836039727E-1,6[&rate=6.353879117364672E-4]:7.99425256734E0)[&rate=7.9948803879238E-4]:4.311046718465E0)[&rate=4.954096163865513E-4]:5.683885151356E1,((30[&rate=5.597647968207942E-4]:4.878842654532E1,26[&rate=6.93111108678976E-4]:4.878842654532E1)[&rate=7.052797320140023E-4]:1.478226345315E1,32[&rate=5.491427303439718E-4]:6.357068999847E1)[&rate=3.0944259144528115E-4]:5.573460800892E0)[&rate=3.0944259144528115E-4]:1.2229872686E0,(16[&rate=5.385094866514385E-4]:2.865453411183E1,((22[&rate=6.93111108678976E-4]:3.489599858561E0,21[&rate=0.001297068663382857]:3.489599858561E0)[&rate=4.954096163865513E-4]:2.967478856669E0,20[&rate=9.006633820679389E-4]:6.45707871523E0)[&rate=0.0019705584790817954]:2.21974553966E1)[&rate=0.00114358405584592]:4.171260395613E1)[&rate=5.810540951006513E-4]:2.410530638553E0)[&rate=5.278437956124108E-4]:1.735053239274E0,25[&rate=6.811797682650033E-4]:7.451272194579E1)[&rate=0.0010134987853753692]:2.225532024632E0)[&rate=6.133757004470313E-4]:5.0254783595E0,(17[&rate=9.006633820679389E-4]:7.641317159754E1,(27[&rate=7.568538055876782E-4]:2.559357579409E1,28[&rate=0.001297068663382857]:2.559357579409E1)[&rate=5.385094866514385E-4]:5.081959580345E1)[&rate=4.254113009507018E-4]:5.350560732381E0)[&rate=0.0014736965125254978]:4.437025353271E1); +tree STATE_910000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55121.9401125964,EEF_ucld_branchRates=-266.168517335019,lnP=-55121.9401125964,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.390036884662745E-4]:8.569827855552E0,9[&rate=7.148944740861485E-4]:8.569827855552E0)[&rate=4.111919487725629E-4]:5.336238860854E0,15[&rate=8.415160265552725E-4]:1.390606671641E1)[&rate=6.885708657971076E-4]:1.076562283553E2,(14[&rate=0.0010935024897558156]:4.44758725026E1,24[&rate=7.938532807515849E-4]:4.44758725026E1)[&rate=9.98941207085299E-4]:7.70864225691E1)[&rate=6.467921533664746E-4]:7.891283140837E0,((((((33[&rate=8.288545851635866E-4]:5.638492094622E1,13[&rate=5.816301159805759E-4]:5.638492094622E1)[&rate=7.059804355164878E-4]:1.277382900037E1,(11[&rate=7.239706214440401E-4]:1.375568193973E1,29[&rate=8.050795589021622E-4]:1.375568193973E1)[&rate=8.415160265552725E-4]:5.540306800687E1)[&rate=8.050795589021622E-4]:2.078856011333E0,(19[&rate=3.907034858927431E-4]:1.629216678805E1,18[&rate=9.750878972317062E-4]:1.629216678805E1)[&rate=4.8022185338086E-4]:5.494543916988E1)[&rate=6.800440455403049E-4]:3.74144215303E0,((10[&rate=5.478082941919665E-4]:2.556548599373E1,31[&rate=5.980270197984777E-4]:2.556548599373E1)[&rate=4.282189767326637E-4]:4.678817562986E1,23[&rate=5.564463449789085E-4]:7.235366162359E1)[&rate=7.52366084311699E-4]:2.62538648737E0)[&rate=6.6327407058424E-4]:2.349951736231E0,((12[&rate=5.816301159805759E-4]:7.44228011961E1,((((((3[&rate=8.167293393070538E-4]:2.592413994882E0,4[&rate=4.111919487725629E-4]:2.592413994882E0)[&rate=7.938532807515849E-4]:2.100055829489E-1,2[&rate=5.64946524516647E-4]:2.802419577831E0)[&rate=0.0011387832826387782]:8.071258714626E0,5[&rate=4.910415268946466E-4]:1.087367829246E1)[&rate=7.059804355164878E-4]:8.787905250732E-1,((7[&rate=3.907034858927431E-4]:7.075170396849E0,1[&rate=6.142751389141861E-4]:7.075170396849E0)[&rate=8.288545851635866E-4]:4.974720350764E-1,6[&rate=0.0010568175604813673]:7.572642431925E0)[&rate=5.478082941919665E-4]:4.179826385605E0)[&rate=7.059804355164878E-4]:5.768785235264E1,((30[&rate=8.288545851635866E-4]:4.974078530311E1,26[&rate=6.972112682849033E-4]:4.974078530311E1)[&rate=6.142751389141861E-4]:1.004351171893E1,32[&rate=3.907034858927431E-4]:5.978429702204E1)[&rate=0.0010568175604813673]:9.65602414813E0)[&rate=4.111919487725629E-4]:3.335888055971E0,(16[&rate=5.816301159805759E-4]:3.231957233018E1,((22[&rate=6.550036882246595E-4]:2.864163877644E0,21[&rate=9.98941207085299E-4]:2.864163877644E0)[&rate=4.910415268946466E-4]:5.674572573211E0,20[&rate=6.467921533664746E-4]:8.538736450855E0)[&rate=0.001287743773141506]:2.378083587933E1)[&rate=7.938532807515849E-4]:4.045663689596E1)[&rate=6.885708657971076E-4]:1.646591969959E0)[&rate=4.5646187356434854E-4]:1.041112882466E0,25[&rate=6.304939004203264E-4]:7.546391407857E1)[&rate=4.282189767326637E-4]:1.865085768624E0)[&rate=8.991923453072178E-4]:6.919867862833E0,(17[&rate=7.72497460384424E-4]:7.647165777472E1,(27[&rate=5.112222246349429E-4]:2.470082187864E1,28[&rate=9.159588426583621E-4]:2.470082187864E1)[&rate=6.467921533664746E-4]:5.177083589608E1)[&rate=6.6327407058424E-4]:7.777209935308E0)[&rate=0.001287743773141506]:4.520471050251E1); +tree STATE_920000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55138.73091840194,EEF_ucld_branchRates=-266.168517335019,lnP=-55138.73091840194,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.7450260217809853E-4]:9.758990763836E0,9[&rate=8.681661513479866E-4]:9.758990763836E0)[&rate=7.326557713541129E-4]:3.971628689291E0,15[&rate=7.71927755651183E-4]:1.373061945313E1)[&rate=5.484008880313274E-4]:1.120077580699E2,(14[&rate=0.0011367165427388286]:4.417582660231E1,24[&rate=7.71927755651183E-4]:4.417582660231E1)[&rate=8.008512529338983E-4]:8.156255092075E1)[&rate=0.0010139256842646987]:3.372958687833E0,((((((33[&rate=6.042605701444062E-4]:5.749360030783E1,13[&rate=4.839789268525269E-4]:5.749360030783E1)[&rate=8.008512529338983E-4]:1.047231907663E1,(11[&rate=7.204465772305116E-4]:1.197767132221E1,29[&rate=6.642981591845761E-4]:1.197767132221E1)[&rate=9.834220831149044E-4]:5.598824806224E1)[&rate=7.452746501629339E-4]:1.759287136238E0,(19[&rate=6.749754801042555E-4]:1.48452643811E1,18[&rate=7.452746501629339E-4]:1.48452643811E1)[&rate=4.550897798985689E-4]:5.487994213959E1)[&rate=5.575633872025565E-4]:2.360736920615E0,((10[&rate=5.853450301206756E-4]:2.512590200615E1,31[&rate=5.667649452417657E-4]:2.512590200615E1)[&rate=3.475743757369768E-4]:4.661119623697E1,23[&rate=3.095428191654753E-4]:7.173709824312E1)[&rate=6.435982461406834E-4]:3.48845198187E-1)[&rate=7.452746501629339E-4]:2.991625771889E0,((12[&rate=8.326477893245556E-4]:7.195987990453E1,((16[&rate=3.095428191654753E-4]:3.257980462917E1,((22[&rate=6.335338797590408E-4]:3.361345512915E0,21[&rate=3.475743757369768E-4]:3.361345512915E0)[&rate=0.0010139256842646987]:4.111378203965E0,20[&rate=3.095428191654753E-4]:7.472723716879E0)[&rate=0.001397660788597717]:2.510708091229E1)[&rate=6.538463077905668E-4]:3.849586934178E1,(((((3[&rate=5.947533306690461E-4]:1.864032259439E0,4[&rate=8.163445158692451E-4]:1.864032259439E0)[&rate=9.313522180765763E-4]:3.227379284328E-1,2[&rate=5.853450301206756E-4]:2.186770187872E0)[&rate=8.008512529338983E-4]:7.991680764781E0,5[&rate=6.538463077905668E-4]:1.017845095265E1)[&rate=0.0011367165427388286]:1.718607428316E0,((7[&rate=3.301992379886347E-4]:7.100085491964E0,1[&rate=3.628929545808831E-4]:7.100085491964E0)[&rate=4.2421495870626467E-4]:3.717261840496E-1,6[&rate=5.209922700640203E-4]:7.471811676014E0)[&rate=4.7450260217809853E-4]:4.425246704955E0)[&rate=5.667649452417657E-4]:5.77602406159E1,((30[&rate=5.209922700640203E-4]:4.963986041521E1,26[&rate=5.118270976006683E-4]:4.963986041521E1)[&rate=8.008512529338983E-4]:7.959875249657E0,32[&rate=4.017537835645486E-4]:5.759973566487E1)[&rate=4.839789268525269E-4]:1.2057563332E1)[&rate=4.017537835645486E-4]:1.418374974074E0)[&rate=4.3480801714783167E-4]:8.842059335864E-1)[&rate=3.301992379886347E-4]:2.495409539813E0,25[&rate=5.118270976006683E-4]:7.445528944434E1)[&rate=6.236344343298788E-4]:6.222797688528E-1)[&rate=3.475743757369768E-4]:2.523623605777E0,(17[&rate=6.538463077905668E-4]:6.983273986816E1,(27[&rate=6.236344343298788E-4]:2.386340283346E1,28[&rate=0.0010887330209776304]:2.386340283346E1)[&rate=6.042605701444062E-4]:4.59693370347E1)[&rate=0.0010887330209776304]:7.768452950812E0)[&rate=0.001397660788597717]:5.151014339191E1); +tree STATE_930000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.36925630346,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.36925630346,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=9.900943521228376E-4]:8.566569890503E0,9[&rate=5.433135397518505E-4]:8.566569890503E0)[&rate=6.804273413900265E-4]:6.277086816739E0,15[&rate=8.059067146432804E-4]:1.484365670724E1)[&rate=6.609779198317763E-4]:1.065965781742E2,(14[&rate=0.001367613207454145]:4.447686965261E1,24[&rate=0.0010501998779511644]:4.447686965261E1)[&rate=7.797491117500977E-4]:7.696336522878E1)[&rate=9.011638420358655E-4]:7.722728001715E0,((((((11[&rate=6.804273413900265E-4]:1.60379217911E1,29[&rate=4.463243318232039E-4]:1.60379217911E1)[&rate=9.207092330446259E-4]:5.924781772252E1,(33[&rate=8.059067146432804E-4]:6.201301344728E1,13[&rate=5.160874072124125E-4]:6.201301344728E1)[&rate=6.804273413900265E-4]:1.327272606634E1)[&rate=3.961065471325046E-4]:1.332560350732E0,(19[&rate=5.522474308271677E-4]:1.521033395577E1,18[&rate=7.006069132855943E-4]:1.521033395577E1)[&rate=3.148656661888777E-4]:6.140796590858E1)[&rate=6.14630594543138E-4]:9.790055382911E-1,((10[&rate=6.32858818950554E-4]:2.54283375525E1,31[&rate=6.514808297429242E-4]:2.54283375525E1)[&rate=3.8071465665445E-4]:5.179574533359E1,23[&rate=4.97345945695808E-4]:7.722408288609E1)[&rate=3.422568930152044E-4]:3.73222516552E-1)[&rate=5.433135397518505E-4]:1.873574258086E0,((12[&rate=8.343827763201443E-4]:7.668684498019E1,((16[&rate=7.925707941135308E-4]:3.370850759852E1,((22[&rate=7.554393576225315E-4]:3.212377496058E0,21[&rate=3.422568930152044E-4]:3.212377496058E0)[&rate=7.797491117500977E-4]:5.168235457732E0,20[&rate=3.6318951828364396E-4]:8.38061295379E0)[&rate=0.0011310687312062126]:2.532789464473E1)[&rate=7.925707941135308E-4]:4.040566103098E1,(((((3[&rate=0.0011856466719875327]:1.974868242742E0,4[&rate=6.237029088792836E-4]:1.974868242742E0)[&rate=8.198195682898914E-4]:6.539422188376E-1,2[&rate=5.252551418746944E-4]:2.628810461579E0)[&rate=8.496832031819567E-4]:7.567091998284E0,5[&rate=4.349226341211698E-4]:1.019590245986E1)[&rate=3.422568930152044E-4]:2.141161238837E0,((7[&rate=6.904159617076632E-4]:7.887989837536E0,1[&rate=3.8071465665445E-4]:7.887989837536E0)[&rate=7.554393576225315E-4]:1.057910877061E0,6[&rate=6.609779198317763E-4]:8.945900714597E0)[&rate=6.32858818950554E-4]:3.391162984103E0)[&rate=5.522474308271677E-4]:5.901318766983E1,((30[&rate=4.97345945695808E-4]:5.275632021792E1,26[&rate=5.877712449039174E-4]:5.275632021792E1)[&rate=6.804273413900265E-4]:8.545341977115E0,32[&rate=4.463243318232039E-4]:6.130166219503E1)[&rate=6.32858818950554E-4]:1.00485891735E1)[&rate=5.160874072124125E-4]:2.763917260968E0)[&rate=0.001018280354246158]:2.572676350692E0)[&rate=3.8071465665445E-4]:1.740312684115E0,25[&rate=0.001018280354246158]:7.84271576643E1)[&rate=5.788893631092454E-4]:1.043721996425E0)[&rate=5.877712449039174E-4]:5.066679650943E0,(17[&rate=7.925707941135308E-4]:7.479240481834E1,(27[&rate=5.067941110771175E-4]:2.621071082587E1,28[&rate=0.0010871177130776118]:2.621071082587E1)[&rate=8.198195682898914E-4]:4.858169399248E1)[&rate=5.700185452462508E-4]:9.745154493328E0)[&rate=0.0012581614934330278]:4.462540357144E1); +tree STATE_940000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55130.69285590193,EEF_ucld_branchRates=-266.168517335019,lnP=-55130.69285590193,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.5403993973752294E-4]:8.228130312379E0,9[&rate=9.324151050805441E-4]:8.228130312379E0)[&rate=8.538412251084788E-4]:5.867972053956E0,15[&rate=6.91041612774984E-4]:1.409610236633E1)[&rate=8.209900570592679E-4]:1.072846224084E2,(14[&rate=0.0011187441861725091]:5.249559668249E1,24[&rate=0.001041305841585183]:5.249559668249E1)[&rate=0.001009741820553941]:6.888512809227E1)[&rate=7.9111590436256E-4]:4.104152641619E0,((((((33[&rate=6.586768935045845E-4]:5.997733916161E1,13[&rate=5.038713446560019E-4]:5.997733916161E1)[&rate=3.15020688220481E-4]:1.364449380994E1,(11[&rate=5.228985559745224E-4]:1.781153464347E1,29[&rate=5.699983939688109E-4]:1.781153464347E1)[&rate=6.083190837641429E-4]:5.581029832809E1)[&rate=5.038713446560019E-4]:1.440454733136E0,(19[&rate=5.511478591510383E-4]:1.439536242552E1,18[&rate=4.645149766217972E-4]:1.439536242552E1)[&rate=4.745896393828604E-4]:6.066692527918E1)[&rate=5.605602745658488E-4]:8.085435537404E-1,((10[&rate=5.228985559745224E-4]:2.440997531272E1,31[&rate=5.228985559745224E-4]:2.440997531272E1)[&rate=3.15020688220481E-4]:4.96067423559E1,23[&rate=3.9726403855559365E-4]:7.401671766862E1)[&rate=7.9111590436256E-4]:1.85411358981E0)[&rate=7.505669433913136E-4]:2.111739346237E0,((((16[&rate=4.844851148374859E-4]:3.461565537247E1,((22[&rate=0.0017128957728306123]:2.357836730859E0,21[&rate=3.697658223502696E-4]:2.357836730859E0)[&rate=5.417449153749616E-4]:4.768302148449E0,20[&rate=9.107322465752494E-4]:7.126138879308E0)[&rate=0.0011684369969849982]:2.748951649316E1)[&rate=0.001041305841585183]:3.547816471023E1,12[&rate=6.181183859841164E-4]:7.00938200827E1)[&rate=8.209900570592679E-4]:2.879821950631E0,(((((3[&rate=3.362092675327412E-4]:2.190331780748E0,4[&rate=7.9111590436256E-4]:2.190331780748E0)[&rate=3.8404336460869944E-4]:4.911683977007E-1,2[&rate=3.15020688220481E-4]:2.681500178449E0)[&rate=7.9111590436256E-4]:6.006376001681E0,5[&rate=4.94235785660238E-4]:8.687876180129E0)[&rate=7.9111590436256E-4]:1.814816871749E0,((7[&rate=6.586768935045845E-4]:6.882185884423E0,6[&rate=4.2147420194382226E-4]:6.882185884423E0)[&rate=4.94235785660238E-4]:1.633879559207E0,1[&rate=6.800269382310719E-4]:8.51606544363E0)[&rate=0.001041305841585183]:1.986627608248E0)[&rate=3.15020688220481E-4]:6.084886410916E1,((30[&rate=6.692461725451588E-4]:5.369096818622E1,26[&rate=7.02314569675468E-4]:5.369096818622E1)[&rate=8.057245366889517E-4]:9.130091699067E0,32[&rate=2.8748421213996745E-4]:6.282105988528E1)[&rate=6.692461725451588E-4]:8.53049727575E0)[&rate=7.770929455169965E-4]:1.622084872296E0)[&rate=4.2147420194382226E-4]:3.502665860666E0,25[&rate=6.380910586282204E-4]:7.6476307894E1)[&rate=6.181183859841164E-4]:1.506262710675E0)[&rate=8.538412251084788E-4]:3.643872522829E0,(17[&rate=6.28036854000833E-4]:7.30657250492E1,(27[&rate=6.586768935045845E-4]:2.605595479346E1,28[&rate=0.0013131625301705061]:2.605595479346E1)[&rate=7.505669433913136E-4]:4.700977025574E1)[&rate=5.890143560467712E-4]:8.560718078296E0)[&rate=0.0013131625301705061]:4.385843428887E1); +tree STATE_950000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.727454768545,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.727454768545,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.565387345008174E-4]:8.095261951754E0,9[&rate=0.0020761272207486634]:8.095261951754E0)[&rate=8.974064807418605E-4]:5.38957803014E0,15[&rate=4.087451471246129E-4]:1.348483998189E1)[&rate=6.80232642651083E-4]:1.0179428265E2,(14[&rate=0.0012394120327276351]:4.502012081775E1,24[&rate=9.794239443454064E-4]:4.502012081775E1)[&rate=0.0011176268948102466]:7.025900181416E1)[&rate=3.3951471514524165E-4]:7.313059721239E0,((((((33[&rate=6.106957905389321E-4]:5.681548913868E1,13[&rate=5.097035470267665E-4]:5.681548913868E1)[&rate=9.163351332549776E-4]:1.098355631626E1,(11[&rate=5.436660972299875E-4]:1.823147338128E1,29[&rate=5.548423344535778E-4]:1.823147338128E1)[&rate=7.172391449965775E-4]:4.956757207366E1)[&rate=3.936459112310721E-4]:9.609414166686E-1,(19[&rate=5.548423344535778E-4]:1.425110571161E1,18[&rate=8.79329944234177E-4]:1.425110571161E1)[&rate=4.981392193141693E-4]:5.450888116E1)[&rate=5.324356355089859E-4]:2.888490683775E0,((10[&rate=3.158047300469646E-4]:2.260064059613E1,31[&rate=7.431402510746801E-4]:2.260064059613E1)[&rate=3.3951471514524165E-4]:4.797669208578E1,23[&rate=7.300498368021334E-4]:7.057733268191E1)[&rate=7.172391449965775E-4]:1.071144873473E0)[&rate=6.682961277697795E-4]:1.455913871998E0,((12[&rate=8.79329944234177E-4]:6.875987826605E1,((16[&rate=3.158047300469646E-4]:2.87051588145E1,((22[&rate=0.001193627575632314]:2.453125231709E0,21[&rate=8.79329944234177E-4]:2.453125231709E0)[&rate=9.163351332549776E-4]:3.965975967039E0,20[&rate=8.293530212295146E-4]:6.419101198748E0)[&rate=0.0013567638882743948]:2.228605761576E1)[&rate=9.163351332549776E-4]:3.933680399551E1,(((30[&rate=5.211245841099812E-4]:5.041209427267E1,26[&rate=5.211245841099812E-4]:5.041209427267E1)[&rate=8.620132716269078E-4]:5.97089199802E0,32[&rate=3.158047300469646E-4]:5.638298627069E1)[&rate=4.229794115111491E-4]:7.774723505272E0,((((2[&rate=6.80232642651083E-4]:1.161920369672E0,4[&rate=0.0010556552688857452]:1.161920369672E0)[&rate=5.211245841099812E-4]:1.180375639585E0,3[&rate=9.794239443454064E-4]:2.342296009258E0)[&rate=8.974064807418605E-4]:7.316756904331E0,5[&rate=3.158047300469646E-4]:9.659052913589E0)[&rate=5.659883612847565E-4]:1.456063425613E0,((7[&rate=8.453771952631063E-4]:5.835932601117E0,6[&rate=6.448968926035843E-4]:5.835932601117E0)[&rate=0.001193627575632314]:1.847735793811E0,1[&rate=4.087451471246129E-4]:7.683668394928E0)[&rate=6.565240926033435E-4]:3.431447944273E0)[&rate=6.682961277697795E-4]:5.304259343676E1)[&rate=5.882772070818888E-4]:3.884253034054E0)[&rate=0.0015449087128659208]:7.179154560298E-1)[&rate=7.172391449965775E-4]:1.214675986695E0,25[&rate=7.565387345008174E-4]:6.997455425274E1)[&rate=6.106957905389321E-4]:3.129837174638E0)[&rate=4.863932278589192E-4]:5.170562193253E0,(17[&rate=0.0010283902386889695]:6.714130517087E1,(27[&rate=3.158047300469646E-4]:2.080957971762E1,28[&rate=0.0015449087128659208]:2.080957971762E1)[&rate=7.172391449965775E-4]:4.633172545325E1)[&rate=4.4956812243790716E-4]:1.113364844977E1)[&rate=0.001193627575632314]:4.431722873252E1); +tree STATE_960000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55144.21666484796,EEF_ucld_branchRates=-266.168517335019,lnP=-55144.21666484796,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.4183980046617747E-4]:6.125486394803E0,9[&rate=9.131902494333585E-4]:6.125486394803E0)[&rate=6.01486297738052E-4]:7.720865426137E0,15[&rate=6.923058710778308E-4]:1.384635182094E1)[&rate=7.040646894152582E-4]:9.699638874476E1,(14[&rate=0.0011809924318088416]:5.28382160693E1,24[&rate=5.902549793767996E-4]:5.28382160693E1)[&rate=0.0015577931878984045]:5.800452449639E1)[&rate=5.56206261350367E-4]:1.297934129317E1,((((((33[&rate=0.0012642352182542522]:5.850859041902E1,13[&rate=3.142124815188378E-4]:5.850859041902E1)[&rate=8.639291079788636E-4]:8.559221515654E0,(11[&rate=4.8355421211935065E-4]:1.78645237658E1,29[&rate=8.05496906546125E-4]:1.78645237658E1)[&rate=7.040646894152582E-4]:4.920328816888E1)[&rate=7.785794030710799E-4]:1.807759148378E0,(19[&rate=9.309714041271513E-4]:1.525259613392E1,18[&rate=0.0010114190309652754]:1.525259613392E1)[&rate=3.4601197131537E-4]:5.362297494913E1)[&rate=9.495706859647326E-4]:3.964084210512E0,((10[&rate=7.528388250581917E-4]:2.091742546475E1,31[&rate=7.785794030710799E-4]:2.091742546475E1)[&rate=3.705838896608609E-4]:5.141244273715E1,23[&rate=5.902549793767996E-4]:7.23298682019E1)[&rate=6.01486297738052E-4]:5.097870916673E-1)[&rate=9.131902494333585E-4]:1.189146194892E0,((12[&rate=9.69092096406379E-4]:7.063260238383E1,((16[&rate=4.2635664950917336E-4]:2.869712807607E1,((22[&rate=7.040646894152582E-4]:2.042739263901E0,21[&rate=3.4601197131537E-4]:2.042739263901E0)[&rate=7.528388250581917E-4]:4.203002750927E0,20[&rate=5.676408294962896E-4]:6.245742014828E0)[&rate=0.0020613282411157197]:2.245138606124E1)[&rate=8.797402600191041E-4]:3.927871727464E1,(((((2[&rate=7.528388250581917E-4]:1.201599572204E0,4[&rate=0.0011809924318088416]:1.201599572204E0)[&rate=9.495706859647326E-4]:7.134931692749E-1,3[&rate=0.0015577931878984045]:1.915092741479E0)[&rate=9.495706859647326E-4]:8.518486609643E0,5[&rate=3.4601197131537E-4]:1.043357935112E1)[&rate=9.89658935875657E-4]:1.891607716359E0,((7[&rate=9.309714041271513E-4]:7.846009382271E0,6[&rate=3.705838896608609E-4]:7.846009382271E0)[&rate=9.89658935875657E-4]:8.565874396046E-1,1[&rate=7.528388250581917E-4]:8.702596821875E0)[&rate=4.564085910532133E-4]:3.622590245606E0)[&rate=6.464219420632956E-4]:5.474957474696E1,((30[&rate=6.577573780871455E-4]:5.196703522333E1,26[&rate=7.280621810046986E-4]:5.196703522333E1)[&rate=0.0010858749784335973]:9.406192029039E0,32[&rate=5.210131282162503E-4]:6.137322725236E1)[&rate=3.4601197131537E-4]:5.701534562075E0)[&rate=0.0015577931878984045]:9.010835362718E-1)[&rate=0.0012642352182542522]:2.65675703312E0)[&rate=5.56206261350367E-4]:2.1646069597E0,25[&rate=5.56206261350367E-4]:7.279720934353E1)[&rate=6.239112525186138E-4]:1.231592144931E0)[&rate=5.676408294962896E-4]:2.711726132367E0,(17[&rate=7.655760897397736E-4]:6.703769919652E1,(27[&rate=7.280621810046986E-4]:2.328388518247E1,28[&rate=9.495706859647326E-4]:2.328388518247E1)[&rate=4.564085910532133E-4]:4.375381401406E1)[&rate=5.210131282162503E-4]:9.702828424308E0)[&rate=0.0013157361928250715]:4.708155423804E1); +tree STATE_970000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55154.515035210075,EEF_ucld_branchRates=-266.168517335019,lnP=-55154.515035210075,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.6589707023059246E-4]:9.0872619867E0,9[&rate=5.364223393560873E-4]:9.0872619867E0)[&rate=6.581161829010711E-4]:4.870364343127E0,15[&rate=6.001912022882079E-4]:1.395762632983E1)[&rate=5.572074754252509E-4]:9.739215079023E1,(14[&rate=0.0010403629654011238]:4.664559059434E1,24[&rate=6.342408212006567E-4]:4.664559059434E1)[&rate=0.0014104897940793338]:6.470418652572E1)[&rate=5.892246828062797E-4]:1.843280254803E1,((((((19[&rate=4.955808312364502E-4]:1.455327889749E1,18[&rate=8.773955810916141E-4]:1.455327889749E1)[&rate=3.6589707023059246E-4]:5.673110566261E1,(11[&rate=5.05743561467904E-4]:1.875814735984E1,29[&rate=4.854191268531925E-4]:1.875814735984E1)[&rate=0.0010403629654011238]:5.252623720025E1)[&rate=2.698819676785777E-4]:4.029933831882E-1,(33[&rate=8.994773048365594E-4]:6.072623452952E1,13[&rate=2.698819676785777E-4]:6.072623452952E1)[&rate=4.2320774406403927E-4]:1.096114341376E1)[&rate=7.681204296520909E-4]:3.612995832506E0,((10[&rate=5.784172626460162E-4]:2.047728117534E1,31[&rate=4.854191268531925E-4]:2.047728117534E1)[&rate=4.752384124334228E-4]:5.334236257538E1,23[&rate=5.892246828062797E-4]:7.381964375072E1)[&rate=2.698819676785777E-4]:1.480730025066E0)[&rate=8.186059777909805E-4]:1.417635964988E0,((12[&rate=7.378299173180694E-4]:7.401520776112E1,(((((2[&rate=4.338587624786942E-4]:1.864262413142E0,4[&rate=8.186059777909805E-4]:1.864262413142E0)[&rate=4.5473147019727786E-4]:5.674842425133E-1,3[&rate=6.113358384298133E-4]:2.431746655655E0)[&rate=7.378299173180694E-4]:9.106502639456E0,5[&rate=4.5473147019727786E-4]:1.153824929511E1)[&rate=8.186059777909805E-4]:1.060087699058E0,((7[&rate=3.089733306653309E-4]:7.544064889519E0,6[&rate=6.226786278298425E-4]:7.544064889519E0)[&rate=3.249268411399915E-4]:1.167498116914E0,1[&rate=2.698819676785777E-4]:8.711563006433E0)[&rate=7.681204296520909E-4]:3.886773987735E0)[&rate=3.6589707023059246E-4]:6.033013274983E1,(((30[&rate=8.371220950499353E-4]:5.578085235416E1,26[&rate=7.842001683872851E-4]:5.578085235416E1)[&rate=0.0011715429838948775]:6.670980003961E0,32[&rate=3.089733306653309E-4]:6.245183235812E1)[&rate=2.427479518955201E-4]:8.967948199312E0,(16[&rate=6.342408212006567E-4]:3.045805756457E1,((22[&rate=0.0011212389528720515]:2.147339326037E0,21[&rate=6.581161829010711E-4]:2.147339326037E0)[&rate=6.7048044543632E-4]:3.776378938581E0,20[&rate=4.012743933811985E-4]:5.923718264618E0)[&rate=0.0019189601608913052]:2.453433929995E1)[&rate=9.231344571198702E-4]:4.096172299286E1)[&rate=6.7048044543632E-4]:1.508689186568E0)[&rate=5.05743561467904E-4]:1.086738017119E0)[&rate=6.342408212006567E-4]:1.530584162235E0,25[&rate=7.842001683872851E-4]:7.554579192336E1)[&rate=0.0014104897940793338]:1.17221781742E0)[&rate=4.6501707945489755E-4]:2.477948035318E0,(17[&rate=0.0011715429838948775]:6.889849475946E1,(27[&rate=4.5473147019727786E-4]:2.847091508902E1,28[&rate=8.009995637084802E-4]:2.847091508902E1)[&rate=8.566698346578898E-4]:4.042757967044E1)[&rate=6.113358384298133E-4]:1.029746301663E1)[&rate=0.0014104897940793338]:5.0586621892E1); +tree STATE_980000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55152.41626247657,EEF_ucld_branchRates=-266.168517335019,lnP=-55152.41626247657,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.038194508457271E-4]:8.321635391608E0,9[&rate=8.16050174715858E-4]:8.321635391608E0)[&rate=4.3571695259247425E-4]:6.537486557666E0,15[&rate=7.400128759257029E-4]:1.485912194927E1)[&rate=6.540304728479668E-4]:9.627615100874E1,(14[&rate=9.966751129556293E-4]:4.644765360222E1,24[&rate=8.335636100482496E-4]:4.644765360222E1)[&rate=0.0011644224560402705]:6.46876193558E1)[&rate=0.0013187217632804934]:1.512771615887E1,((25[&rate=5.709392431926823E-4]:7.603686450005E1,(((((33[&rate=7.994307819304341E-4]:6.108709799894E1,13[&rate=3.416859892993394E-4]:6.108709799894E1)[&rate=4.2543439506494694E-4]:9.283510000413E0,(11[&rate=4.2543439506494694E-4]:2.035125705171E1,29[&rate=6.321712974769474E-4]:2.035125705171E1)[&rate=7.994307819304341E-4]:5.001935094764E1)[&rate=5.418924670941285E-4]:1.243130119386E0,(19[&rate=8.16050174715858E-4]:1.047159865577E1,18[&rate=4.847632375680483E-4]:1.047159865577E1)[&rate=5.133160106078826E-4]:6.114213946297E1)[&rate=2.612990363077308E-4]:2.036359305974E0,((10[&rate=9.966751129556293E-4]:2.039608468915E1,31[&rate=7.265664834922353E-4]:2.039608468915E1)[&rate=3.0874329721526254E-4]:5.277651629742E1,23[&rate=6.321712974769474E-4]:7.317260098657E1)[&rate=5.038194508457271E-4]:4.774964381349E-1)[&rate=3.2622220165729154E-4]:2.347438389872E0,((((((2[&rate=7.400128759257029E-4]:1.690946014027E0,4[&rate=6.653255347179759E-4]:1.690946014027E0)[&rate=8.718055494708534E-4]:1.367498459238E0,3[&rate=6.321712974769474E-4]:3.058444473265E0)[&rate=6.768976978316347E-4]:6.5581327134E0,5[&rate=3.0874329721526254E-4]:9.616577186665E0)[&rate=2.1701082867724318E-4]:2.696974047569E0,((7[&rate=4.457945651169165E-4]:8.985062939061E0,6[&rate=6.215619318246486E-4]:8.985062939061E0)[&rate=6.008821640348195E-4]:7.424368483705E-1,1[&rate=6.008821640348195E-4]:9.727499787432E0)[&rate=3.81127663699935E-4]:2.586051446802E0)[&rate=4.6548664412811644E-4]:6.064295634665E1,((30[&rate=7.684687899267046E-4]:5.274966031794E1,26[&rate=7.994307819304341E-4]:5.274966031794E1)[&rate=4.7516366126329994E-4]:1.027657859717E1,32[&rate=3.68828845468391E-4]:6.302623891511E1)[&rate=2.8805201206636246E-4]:9.930268665774E0)[&rate=5.907748014949115E-4]:1.270731311441E0,((16[&rate=3.68828845468391E-4]:3.198314187737E1,((22[&rate=8.928766965601316E-4]:2.977240922716E0,21[&rate=4.7516366126329994E-4]:2.977240922716E0)[&rate=6.321712974769474E-4]:5.016304052443E0,20[&rate=0.0011117238317192605]:7.993544975159E0)[&rate=0.0017504216705868088]:2.398959690221E1)[&rate=0.0012303439805651903]:3.986208150001E1,12[&rate=8.718055494708534E-4]:7.184522337738E1)[&rate=6.768976978316347E-4]:2.382015514943E0)[&rate=3.416859892993394E-4]:1.770296922258E0)[&rate=5.611785333078955E-4]:3.932868547233E-2)[&rate=5.133160106078826E-4]:4.912048050537E0,(17[&rate=7.994307819304341E-4]:7.210889706001E1,(27[&rate=4.943082428954315E-4]:2.290648121954E1,28[&rate=0.0011117238317192605]:2.290648121954E1)[&rate=7.400128759257029E-4]:4.920241584046E1)[&rate=6.111385492247486E-4]:8.840015490583E0)[&rate=0.0013187217632804934]:4.53140765663E1); +tree STATE_990000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55157.155388174986,EEF_ucld_branchRates=-266.168517335019,lnP=-55157.155388174986,RHOD_ucld_branchRates=-266.168517335019] = [&R] 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+tree STATE_1000000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55136.136594571886,EEF_ucld_branchRates=-266.168517335019,lnP=-55136.136594571886,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.65726218474487E-4]:8.515430382666E0,9[&rate=6.06819128073254E-4]:8.515430382666E0)[&rate=7.929519599953199E-4]:6.728925838673E0,15[&rate=5.798508543767756E-4]:1.524435622134E1)[&rate=6.84438547709924E-4]:9.097024241699E1,(14[&rate=0.0011058922834672265]:4.53712664973E1,24[&rate=7.286769742686582E-4]:4.53712664973E1)[&rate=8.561277076731885E-4]:6.084333214103E1)[&rate=4.6356667714520205E-4]:2.351623400921E1,(((((((2[&rate=6.84438547709924E-4]:1.311736444966E0,4[&rate=8.22825256443977E-4]:1.311736444966E0)[&rate=4.914733263637745E-4]:8.675635577651E-1,3[&rate=0.0010242678641913187]:2.179300002731E0)[&rate=0.0011058922834672265]:7.236329918222E0,5[&rate=6.159929199778437E-4]:9.415629920953E0)[&rate=5.271064880275239E-4]:3.458666795373E0,((7[&rate=5.709977803998803E-4]:7.951718354199E0,6[&rate=4.1180574977025674E-4]:7.951718354199E0)[&rate=6.06819128073254E-4]:1.054511137922E0,1[&rate=6.252837701836565E-4]:9.006229492121E0)[&rate=7.171387201721583E-4]:3.868067224205E0)[&rate=4.5387707548858814E-4]:6.10954997398E1,(((30[&rate=5.534107495446971E-4]:5.047727243855E1,26[&rate=5.094330314067382E-4]:5.047727243855E1)[&rate=7.929519599953199E-4]:1.304383900529E1,32[&rate=6.06819128073254E-4]:6.352111144384E1)[&rate=3.418095027982908E-4]:8.701444286939E0,((16[&rate=2.5023735379034993E-4]:3.321061304552E1,((22[&rate=6.347074649665556E-4]:2.608552334697E0,21[&rate=2.949124689402047E-4]:2.608552334697E0)[&rate=5.358849889635957E-4]:4.771290987645E0,20[&rate=7.405922629509587E-4]:7.379843322343E0)[&rate=0.0013457290499930231]:2.583076972317E1)[&rate=0.0011058922834672265]:3.688665857329E1,12[&rate=0.0010242678641913187]:7.009727161881E1)[&rate=5.094330314067382E-4]:2.125284111971E0)[&rate=7.65726218474487E-4]:1.747240725351E0)[&rate=4.2296895275049435E-4]:3.705209196954E0,(25[&rate=6.740785995479225E-4]:7.561728716786E1,((((33[&rate=7.65726218474487E-4]:6.481482110201E1,13[&rate=3.7387684212836507E-4]:6.481482110201E1)[&rate=9.383012017246343E-4]:6.376144199023E0,(11[&rate=6.442805814590756E-4]:1.816058312655E1,29[&rate=3.5887064462889016E-4]:1.816058312655E1)[&rate=6.540207094626872E-4]:5.303038217448E1)[&rate=4.4392179565090097E-4]:5.750984260881E-1,(19[&rate=7.929519599953199E-4]:1.087880451071E1,18[&rate=5.446477529447429E-4]:1.087880451071E1)[&rate=4.6356667714520205E-4]:6.088725921641E1)[&rate=4.914733263637745E-4]:2.989215017322E0,((10[&rate=7.929519599953199E-4]:1.788856949451E1,31[&rate=6.540207094626872E-4]:1.788856949451E1)[&rate=3.2146743175579955E-4]:5.623416793485E1,23[&rate=5.271064880275239E-4]:7.412273742936E1)[&rate=6.347074649665556E-4]:6.32541315082E-1)[&rate=3.5887064462889016E-4]:8.620084234172E-1)[&rate=6.252837701836565E-4]:2.057718485222E0)[&rate=4.2296895275049435E-4]:4.941470638607E0,(17[&rate=8.389868262114616E-4]:7.440257651085E1,(27[&rate=3.5887064462889016E-4]:2.604575213884E1,28[&rate=0.0013457290499930231]:2.604575213884E1)[&rate=7.286769742686582E-4]:4.835682437201E1)[&rate=8.940139469297388E-4]:8.213899780837E0)[&rate=0.001585983349993784]:4.711435635585E1); +End; diff --git a/src/TEST/run2.p b/src/TEST/run2.p new file mode 100644 index 0000000..9f512c6 --- /dev/null +++ b/src/TEST/run2.p @@ -0,0 +1,502 @@ +Gen LnL LnPr TL{all} r(A<->C){all} r(A<->G){all} r(A<->T){all} r(C<->G){all} r(C<->T){all} r(G<->T){all} pi(A){all} pi(C){all} pi(G){all} pi(T){all} alpha{all} pinvar{all} +0 -2.561028e+04 -2.876914e+01 8.321362e+00 1.425849e-02 5.480320e-01 3.602417e-02 1.455460e-02 3.110515e-01 7.607930e-02 3.406596e-01 4.476472e-01 6.009528e-02 1.515979e-01 7.541165e-01 4.299346e-01 +1 -2.562996e+04 -3.626180e+01 9.145354e+00 1.428379e-02 5.772625e-01 2.056351e-02 1.343023e-02 2.879508e-01 8.650916e-02 3.416052e-01 4.421873e-01 5.877676e-02 1.574308e-01 6.107722e-01 4.255472e-01 +2 -2.560949e+04 -3.483579e+01 8.973865e+00 1.473324e-02 5.286236e-01 2.854095e-02 1.192542e-02 3.282517e-01 8.792511e-02 3.483711e-01 4.386570e-01 6.071897e-02 1.522530e-01 7.162783e-01 4.336521e-01 +3 -2.561581e+04 -2.969123e+01 8.418771e+00 1.473324e-02 5.286236e-01 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1.456183e-01 6.444172e-01 3.979065e-01 +497 -2.562726e+04 -3.117516e+01 8.578195e+00 1.494588e-02 5.572569e-01 3.142162e-02 1.908854e-02 3.070151e-01 7.027195e-02 3.440535e-01 4.477427e-01 5.762976e-02 1.505740e-01 7.026502e-01 4.086000e-01 +498 -2.563547e+04 -4.476208e+01 1.014618e+01 1.397270e-02 6.002729e-01 2.540609e-02 1.303682e-02 2.728592e-01 7.445228e-02 3.420850e-01 4.489292e-01 5.587707e-02 1.531087e-01 7.028454e-01 3.964668e-01 +499 -2.561241e+04 -4.229667e+01 9.849913e+00 1.528257e-02 5.604048e-01 2.831545e-02 1.454320e-02 3.073300e-01 7.412401e-02 3.471748e-01 4.369289e-01 6.259994e-02 1.532964e-01 6.378649e-01 3.920198e-01 +500 -2.561437e+04 -3.343121e+01 8.819019e+00 1.364716e-02 5.058547e-01 3.713427e-02 1.752883e-02 3.592584e-01 6.657668e-02 3.573228e-01 4.355069e-01 6.246680e-02 1.447035e-01 7.196523e-01 4.225202e-01 diff --git a/src/TEST/run2.trees b/src/TEST/run2.trees new file mode 100644 index 0000000..e3f3c04 --- /dev/null +++ b/src/TEST/run2.trees @@ -0,0 +1,229 @@ +#NEXUS + +Begin taxa; + Dimensions ntax=33; + Taxlabels + 113_V_gryphus + 128_C_burrovianus + 135_C_aura + 31_C_melambrotus + 6_C_atratus + 97_S_papa + 9_G_californianus + Anas_clypeata + Anas_platyrhunchos + Apterodytes_patagonicus + Ardea_herodias + Asio_otus + Balaeniceps_rex + Bonasa_umbellus + Bucephala_abeola + Caracara_cheriway + Charadrius_alexandrinus + Ciconia_maguari + Ephippiorhynchus_senegalensis + Falco_femoralis + Falco_peregrinus + Falco_rusticolus + Fulmarus_glacialis + Gallus_gallus + Gavia_immer + Gyps_bengalensis + Larus_marinus + Lunda_cirrhata + Nyctanassa_violacea + Pandion + Pygoscelis_antarcticus + Sagittarius + Scopus_umbretta + ; +End; + +Begin trees; + Translate + 1 113_V_gryphus, + 2 128_C_burrovianus, + 3 135_C_aura, + 4 31_C_melambrotus, + 5 6_C_atratus, + 6 97_S_papa, + 7 9_G_californianus, + 8 Anas_clypeata, + 9 Anas_platyrhunchos, + 10 Apterodytes_patagonicus, + 11 Ardea_herodias, + 12 Asio_otus, + 13 Balaeniceps_rex, + 14 Bonasa_umbellus, + 15 Bucephala_abeola, + 16 Caracara_cheriway, + 17 Charadrius_alexandrinus, + 18 Ciconia_maguari, + 19 Ephippiorhynchus_senegalensis, + 20 Falco_femoralis, + 21 Falco_peregrinus, + 22 Falco_rusticolus, + 23 Fulmarus_glacialis, + 24 Gallus_gallus, + 25 Gavia_immer, + 26 Gyps_bengalensis, + 27 Larus_marinus, + 28 Lunda_cirrhata, + 29 Nyctanassa_violacea, + 30 Pandion, + 31 Pygoscelis_antarcticus, + 32 Sagittarius, + 33 Scopus_umbretta + ; +tree STATE_0 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-95143.48101001458,EEF_ucld_branchRates=-266.168517335019,lnP=-95143.48101001458,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=0.02234135338553881]:5.09961E0,9[&rate=0.02837737786871923]:5.09961E0)[&rate=0.08852504376910755]:4.69329E0,15[&rate=0.032172544376755666]:9.7929E0)[&rate=0.09048013234469902]:8.54202E1,(14[&rate=0.035178720277860634]:3.44813E1,24[&rate=0.03776392226896683]:3.44813E1)[&rate=0.09248621721034095]:6.07318E1)[&rate=0.09454809074648765]:1.90448E1,(((((19[&rate=0.040084625791642695]:7.55131E0,18[&rate=0.04222370293714232]:7.55131E0)[&rate=0.0966710180250762]:6.00086E1,((33[&rate=0.0442310403283049]:5.9902553E1,13[&rate=0.046139350448828095]:5.9902553E1)[&rate=0.0988608186246841]:7.11938E0,(11[&rate=0.04797145754430627]:1.4373533E1,29[&rate=0.04974406499292393]:1.4373533E1)[&rate=0.10112396417852913]:5.26484E1)[&rate=0.10346769579051854]:5.37977E-1)[&rate=0.10590016670797511]:1.74225E0,((10[&rate=0.05146987509034866]:1.0828134E1,31[&rate=0.05315886193965773]:1.0828134E1)[&rate=0.10843061735954053]:5.82947E1,23[&rate=0.05481907652257585]:6.9122834E1)[&rate=0.1110695922545826]:1.79326E-1)[&rate=0.11382921159990848]:2.10502E0,((12[&rate=0.05645717809392223]:6.697338E1,(((16[&rate=0.05807879781036426]:1.332987E1,((22[&rate=0.05968879545822361]:1.62809E0,21[&rate=0.06129144582349835]:1.62809E0)[&rate=0.11672351528643168]:1.80365E0,20[&rate=0.06289057748385585]:3.43174E0)[&rate=0.1197689038605611]:9.89813E0)[&rate=0.12298471138435389]:4.98254E1,((30[&rate=0.06448967869610779]:5.12196E1,26[&rate=0.06609198011174378]:5.12196E1)[&rate=0.1263939606029411]:4.75282E0,32[&rate=0.06770052095127599]:5.597242E1)[&rate=0.13002437475881606]:7.18285E0)[&rate=0.13390975820773335]:1.27429E0,((((3[&rate=0.06931820327112426]:7.55302E-1,4[&rate=0.0709478376436605]:7.55302E-1)[&rate=0.13809191947416302]:2.01528E-1,2[&rate=0.07259218269320954]:9.5683E-1)[&rate=0.14262341358753114]:5.45989E0,5[&rate=0.0742539803375295]:6.41672E0)[&rate=0.14757156021233067]:2.27674E0,((6[&rate=0.07593598818215795]:4.627846E0,7[&rate=0.07764101024517056]:4.627846E0)[&rate=0.15302452037296171]:5.82054E-1,1[&rate=0.0793719270149648]:5.2099E0)[&rate=0.1591008371574467]:3.48356E0)[&rate=0.16596510567742037]:5.57361E1)[&rate=0.1738551754505638]:2.54382E0)[&rate=0.18313278812845646]:2.6958E0,25[&rate=0.08113172574000375]:6.966918E1)[&rate=0.19438683381524174]:1.738E0)[&rate=0.20867186822964753]:1.19542E0,(17[&rate=0.08292353180254597]:6.23045E1,(27[&rate=0.08475064203020245]:2.25099E1,28[&rate=0.08661656249982545]:2.25099E1)[&rate=0.22816999477396083]:3.97946E1)[&rate=0.25868525683626453]:1.02981E1)[&rate=0.32857495943199877]:4.16553E1); +tree STATE_10000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55642.88669685059,EEF_ucld_branchRates=-266.168517335019,lnP=-55642.88669685059,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=1.7059247495734066E-4]:5.214364319514E0,9[&rate=0.004977268091956065]:5.214364319514E0)[&rate=2.764832205591581E-5]:4.399701646978E0,15[&rate=6.46092746186996E-4]:9.614065966492E0)[&rate=0.0012804811250744857]:9.300368803653E1,(14[&rate=0.0030560325187369637]:3.059480551555E1,24[&rate=0.0016506393730639976]:3.059480551555E1)[&rate=0.0019592168530436394]:7.202294848748E1)[&rate=0.03856650522494413]:1.592235398036E-1,(25[&rate=7.691944654578447E-4]:7.33283531147E1,(((17[&rate=0.002136759752053799]:3.727178781712E1,(27[&rate=4.931291636306746E-4]:2.934580396799E1,28[&rate=0.0010816572434484747]:2.934580396799E1)[&rate=0.0030560325187369637]:7.925983849128E0)[&rate=3.354987256452663E-4]:3.393908724801E1,(12[&rate=5.403513490720421E-4]:7.089283874881E1,(((30[&rate=5.912333395725239E-4]:5.642549249395E1,26[&rate=3.706889958902214E-4]:5.642549249395E1)[&rate=0.006920379925546729]:4.661387646598E0,32[&rate=1.4948519687465068E-4]:6.108688014055E1)[&rate=6.734848001969103E-6]:3.431418152891E0,(((((4[&rate=0.010081391278205282]:4.373377592155E-1,3[&rate=0.013490886332526377]:4.373377592155E-1)[&rate=0.010081391278205282]:7.12022564289E-2,2[&rate=0.019019442270180296]:5.085400156444E-1)[&rate=0.004491876257039267]:5.457718499777E0,5[&rate=5.142518363340267E-5]:5.966258515421E0)[&rate=0.029305072991786744]:1.445382453033E-1,((6[&rate=0.004491876257039267]:4.945948503991E0,7[&rate=1.2988857204521237E-4]:4.945948503991E0)[&rate=0.010081391278205282]:1.180638678735E-1,1[&rate=4.085450515753992E-4]:5.064012371864E0)[&rate=0.003354296400643816]:1.046784388861E0)[&rate=7.052822660780628E-4]:5.837429645166E1,(16[&rate=1.93314712653003E-4]:3.10702860565E1,((22[&rate=0.013490886332526377]:5.829742699403E-1,21[&rate=2.764832205591581E-5]:5.829742699403E-1)[&rate=0.0010816572434484747]:2.723937142235E0,20[&rate=6.478603459940597E-5]:3.306911412176E0)[&rate=0.0019592168530436394]:2.776337464432E1)[&rate=0.0011769160282665155]:3.341480715589E1)[&rate=0.223764331363126]:3.32050810503E-2)[&rate=0.003354296400643816]:6.374540455373E0)[&rate=0.006920379925546729]:3.180363163246E-1)[&rate=0.054506698704721294]:1.07230552409E-1,(((19[&rate=1.1170643075981579E-4]:5.47286942614E1,18[&rate=2.1776532158728905E-4]:5.47286942614E1)[&rate=0.002136759752053799]:1.541349290036E1,((33[&rate=8.382673558771904E-4]:6.66402531143E1,13[&rate=4.931291636306746E-4]:6.66402531143E1)[&rate=0.002136759752053799]:3.069469093374E0,(11[&rate=4.085450515753992E-4]:1.645602476491E1,29[&rate=9.129909201157009E-4]:1.645602476491E1)[&rate=0.0013932498202372464]:5.325369744276E1)[&rate=0.007795675452276504]:4.324649540828E-1)[&rate=0.0886262606756945]:1.600022065946E-2,((10[&rate=2.1776532158728905E-4]:6.048043001906E1,31[&rate=1.1170643075981579E-4]:6.048043001906E1)[&rate=0.0025489407635275003]:9.661282042664E0,23[&rate=3.706889958902214E-4]:7.014171206172E1)[&rate=0.019019442270180296]:1.647532069479E-2)[&rate=7.923569674572886E-5]:1.15991823513E0)[&rate=3.907584447185506E-5]:2.010247497156E0)[&rate=0.005533246223236269]:2.944862442812E1); +tree STATE_20000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55275.219692732775,EEF_ucld_branchRates=-266.168517335019,lnP=-55275.219692732775,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=0.0022997457419140738]:5.240882843361E0,9[&rate=0.0028965940884385383]:5.240882843361E0)[&rate=6.777784347624889E-5]:5.490876806141E0,15[&rate=8.081912377384307E-4]:1.07317596495E1)[&rate=6.547699319298554E-4]:9.354207159924E1,(14[&rate=0.001848508075092935]:3.082770233843E1,24[&rate=0.0017220482251467904]:3.082770233843E1)[&rate=8.081912377384307E-4]:7.344612891031E1)[&rate=0.017857568851752065]:5.215963715861E-2,(25[&rate=7.028534328051217E-4]:7.300710970977E1,(((17[&rate=0.0024795691472661923]:3.551663789333E1,(27[&rate=4.881281523585811E-4]:2.674820267421E1,28[&rate=0.0010632839544861931]:2.674820267421E1)[&rate=0.0024795691472661923]:8.768435219123E0)[&rate=1.584443962188327E-4]:3.696662633062E1,(12[&rate=8.659533789087062E-4]:7.20388485978E1,(((30[&rate=7.028534328051217E-4]:5.765062406832E1,26[&rate=4.520259524452992E-4]:5.765062406832E1)[&rate=0.004453032522749926]:2.640974747078E0,32[&rate=2.0052181003636096E-4]:6.02915988154E1)[&rate=4.178519563135782E-4]:5.336894608245E0,((16[&rate=1.2003035966835468E-4]:4.065506309952E1,((22[&rate=0.010083678078151173]:9.022341581582E-1,21[&rate=1.6359622371943326E-5]:9.022341581582E-1)[&rate=1.584443962188327E-4]:2.12320423905E0,20[&rate=0.004903112199516039]:3.025438397208E0)[&rate=0.0014976003821661268]:3.762962470231E1)[&rate=0.0017220482251467904]:2.495925341144E1,((((4[&rate=0.004060879261652358]:4.673347650917E-1,2[&rate=8.462704752667726E-5]:4.673347650917E-1)[&rate=6.777784347624889E-5]:1.08618498345E-1,3[&rate=0.00676216495931394]:5.759532634366E-1)[&rate=0.0013049620017759988]:5.64406205996E0,5[&rate=2.2311845794020807E-4]:6.220015323397E0)[&rate=0.011866131727310065]:1.071240966353E-1,((6[&rate=0.0031398479106215594]:5.30560414398E0,7[&rate=1.3881720045184917E-4]:5.30560414398E0)[&rate=0.00676216495931394]:1.155281533512E-1,1[&rate=5.124210819289332E-5]:5.421132297331E0)[&rate=0.005424685692408027]:9.060071227007E-1)[&rate=4.881281523585811E-4]:5.928717709093E1)[&rate=0.0739838291485339]:1.417691268114E-2)[&rate=0.0014976003821661268]:6.410355174164E0)[&rate=0.0076389417068984874]:4.444156261416E-1)[&rate=0.03499100442041858]:1.331719721656E-1,((((33[&rate=5.666803823683567E-4]:6.772556392289E1,13[&rate=2.7180297927690633E-4]:6.772556392289E1)[&rate=6.094449078807157E-4]:3.387912247288E0,(11[&rate=4.881281523585811E-4]:1.575135259869E1,29[&rate=0.0011383107037341317]:1.575135259869E1)[&rate=0.0013049620017759988]:5.536212357149E1)[&rate=0.03499100442041858]:6.990452801519E-2,(19[&rate=3.5479250689151513E-4]:5.573000751709E1,18[&rate=2.468529083670278E-4]:5.573000751709E1)[&rate=0.0010632839544861931]:1.545337318111E1)[&rate=0.014302135568641303]:1.719552652281E-1,((10[&rate=8.462704752667726E-5]:6.335943904311E1,31[&rate=2.468529083670278E-4]:6.335943904311E1)[&rate=0.001985983459455347]:7.45606980647E0,23[&rate=4.178519563135782E-4]:7.081550884958E1)[&rate=0.004453032522749926]:5.398271138463E-1)[&rate=0.0031398479106215594]:1.261100232686E0)[&rate=0.0076389417068984874]:3.906735136627E-1)[&rate=0.0024795691472661923]:3.131888117613E1); +tree STATE_30000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55179.45885855026,EEF_ucld_branchRates=-266.168517335019,lnP=-55179.45885855026,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.093277085855822E-5]:7.966702002258E0,9[&rate=0.002607953965603514]:7.966702002258E0)[&rate=5.564555476898796E-4]:4.644249499209E0,15[&rate=3.7722561982394447E-4]:1.261095150147E1)[&rate=0.0010833386397313249]:9.373329838215E1,(14[&rate=0.0016889536729345204]:3.842591425969E1,24[&rate=6.687242671499543E-4]:3.842591425969E1)[&rate=0.001225116695075007]:6.791833562393E1)[&rate=0.007903941459297839]:4.400958697616E0,(((25[&rate=5.227888993365406E-4]:7.951584084202E1,(12[&rate=9.03528465918031E-4]:7.816478512277E1,((16[&rate=1.1733751068509043E-4]:4.195555076814E1,((22[&rate=0.005809932199529795]:1.009744081656E0,21[&rate=2.0256173980437423E-4]:1.009744081656E0)[&rate=0.00207929865951241]:2.097288000226E0,20[&rate=0.002607953965603514]:3.107032081882E0)[&rate=0.0013040119681330977]:3.884851868626E1)[&rate=0.001480966687794605]:2.974182902233E1,(((30[&rate=4.603229682074566E-4]:6.020560690364E1,26[&rate=4.036362823128827E-4]:6.020560690364E1)[&rate=8.012437990984265E-4]:4.448629234009E0,32[&rate=3.7722561982394447E-4]:6.465423613765E1)[&rate=5.544696562049217E-5]:6.935852101311E0,((((4[&rate=0.00207929865951241]:6.2580394247E-1,3[&rate=0.003365507139701496]:6.2580394247E-1)[&rate=8.625101603454187E-5]:5.756548617124E-2,2[&rate=8.625101603454187E-5]:6.833694286412E-1)[&rate=0.0030788310142172877]:5.826519598302E0,5[&rate=2.2142266931635671E-4]:6.509889026943E0)[&rate=0.009610832529034448]:4.321959296728E-1,((6[&rate=0.0018072022304851565]:5.75145998676E0,7[&rate=0.0010833386397313249]:5.75145998676E0)[&rate=0.004086413317445849]:2.952693643029E-1,1[&rate=8.625101603454187E-5]:6.046729351063E0)[&rate=0.002828518326215556]:8.953556055525E-1)[&rate=4.3130605433649543E-4]:6.464800328234E1)[&rate=0.017379618861850667]:1.072915515083E-1)[&rate=8.012437990984265E-4]:6.467405332298E0)[&rate=5.227888993365406E-4]:1.351055719251E0)[&rate=0.017379618861850667]:6.666911997958E-2,((((33[&rate=4.603229682074566E-4]:7.371846215682E1,13[&rate=2.0256173980437423E-4]:7.371846215682E1)[&rate=0.0016889536729345204]:3.481654545272E0,(11[&rate=4.036362823128827E-4]:1.808226883445E1,29[&rate=7.545119022335537E-4]:1.808226883445E1)[&rate=6.292796698464019E-4]:5.911784786765E1)[&rate=0.004549592604630024]:3.911524673407E-2,(19[&rate=3.0476315215583605E-4]:5.498917330935E1,18[&rate=1.3336881406312087E-4]:5.498917330935E1)[&rate=6.292796698464019E-4]:2.225005863948E1)[&rate=0.004549592604630024]:1.679445911057E0,((10[&rate=1.6682673253621806E-4]:6.965509871845E1,31[&rate=1.4984264323979307E-4]:6.965509871845E1)[&rate=0.0019367532445759685]:8.797074402333E0,23[&rate=3.7722561982394447E-4]:7.845217312078E1)[&rate=0.006705437711460956]:4.665047390989E-1)[&rate=2.028546282488894E-5]:6.638321021139E-1)[&rate=0.017379618861850667]:2.206807318237E-1,(17[&rate=0.0013040119681330977]:4.049684309037E1,(27[&rate=2.410177000529094E-4]:3.210499180547E1,28[&rate=8.012437990984265E-4]:3.210499180547E1)[&rate=0.003365507139701496]:8.391851284907E0)[&rate=2.2142266931635671E-4]:3.930634760345E1)[&rate=0.001580601465450594]:3.094201788741E1); +tree STATE_40000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55151.5861721761,EEF_ucld_branchRates=-266.168517335019,lnP=-55151.5861721761,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=1.2024877354116295E-4]:7.83615994843E0,9[&rate=0.0019281225632662932]:7.83615994843E0)[&rate=1.0179008242508551E-4]:4.188164410096E0,15[&rate=0.0010393472887508326]:1.202432435853E1)[&rate=8.037287297770403E-4]:9.274659015965E1,(14[&rate=0.001517505018135576]:3.518337229476E1,24[&rate=0.0018117250133607113]:3.518337229476E1)[&rate=0.001517505018135576]:6.958754222342E1)[&rate=0.0035312008198202564]:8.049270441345E0,(((25[&rate=5.89061875203948E-4]:7.75772666266E1,(12[&rate=7.635994596572456E-4]:7.590560386979E1,(((((4[&rate=0.019413534648858456]:5.148552440012E-1,3[&rate=0.0012172668349647057]:5.148552440012E-1)[&rate=0.0025315315903773217]:1.527603398979E-1,2[&rate=5.585473782125097E-4]:6.676155838992E-1)[&rate=2.685730653486481E-4]:6.627946511455E0,5[&rate=1.0179008242508551E-4]:7.295562095354E0)[&rate=0.004914695865750292]:2.178349571865E-1,((6[&rate=0.0017053168495670518]:5.298853407629E0,7[&rate=4.74086965356768E-4]:5.298853407629E0)[&rate=0.004349463285911108]:6.747604825125E-1,1[&rate=3.9869494013806896E-4]:5.973613890142E0)[&rate=0.0035312008198202564]:1.539783162398E0)[&rate=5.011395039836326E-4]:6.260420563302E1,(((30[&rate=6.541617095780695E-4]:5.819548404854E1,26[&rate=4.480388474035561E-4]:5.819548404854E1)[&rate=0.0027310982599314648]:5.057138355641E0,32[&rate=4.480388474035561E-4]:6.325262240418E1)[&rate=1.2024877354116295E-4]:6.771980290792E0,(16[&rate=4.2292888790556026E-4]:4.028740091137E1,((22[&rate=0.004349463285911108]:1.300843264863E0,21[&rate=8.037287297770403E-4]:1.300843264863E0)[&rate=0.0020560901830160394]:1.789421380498E0,20[&rate=0.0014341275945921128]:3.090264645361E0)[&rate=0.001154210156648106]:3.719713626601E1)[&rate=0.0013567104445966446]:2.97372017836E1)[&rate=0.019413534648858456]:9.299999059417E-2)[&rate=0.00219757830793981]:5.78800118423E0)[&rate=0.002355026206423273]:1.671662756809E0)[&rate=0.0038997146115039155]:3.534939529989E-1,((((11[&rate=1.7434639890029653E-4]:1.90992836356E1,29[&rate=3.9869494013806896E-4]:1.90992836356E1)[&rate=4.74086965356768E-4]:5.50609951158E1,(33[&rate=6.209007276687648E-4]:7.176970778897E1,13[&rate=2.685730653486481E-4]:7.176970778897E1)[&rate=6.209007276687648E-4]:2.390570962426E0)[&rate=0.008239680386668955]:4.22680263424E-1,(19[&rate=3.526234339080626E-4]:4.796289214113E1,18[&rate=1.5631841322972652E-4]:4.796289214113E1)[&rate=6.541617095780695E-4]:2.662006687369E1)[&rate=1.9254107425393708E-4]:2.4021479802E0,((10[&rate=2.685730653486481E-4]:6.078052866148E1,31[&rate=2.887021797889817E-4]:6.078052866148E1)[&rate=8.903898380962199E-4]:1.564059449111E1,23[&rate=6.88951703283418E-4]:7.642112315259E1)[&rate=3.502202002635079E-5]:5.639838424251E-1)[&rate=1.2024877354116295E-4]:9.456535845826E-1)[&rate=0.008239680386668955]:2.459783262736E-1,(17[&rate=0.001607601700185582]:4.031168022208E1,(27[&rate=2.4894790833034243E-4]:3.114826819936E1,28[&rate=0.0010950240013525745]:3.114826819936E1)[&rate=0.0025315315903773217]:9.163412022729E0)[&rate=2.1099221147138187E-4]:3.786505868379E1)[&rate=0.0012172668349647057]:3.464344605365E1); +tree STATE_50000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55105.61998721235,EEF_ucld_branchRates=-266.168517335019,lnP=-55105.61998721235,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=1.8583754139810886E-4]:8.30381200721E0,9[&rate=0.0016619852085184733]:8.30381200721E0)[&rate=0.0013269492615378706]:4.570806837338E0,15[&rate=5.224021745658479E-4]:1.287461884455E1)[&rate=8.433792054573883E-4]:9.662761576276E1,(14[&rate=0.001842895668625106]:3.533451664375E1,24[&rate=0.0019488454321163384]:3.533451664375E1)[&rate=0.0011759685359490231]:7.416771796355E1)[&rate=0.0025494688700410445]:1.253245067508E1,(((25[&rate=5.224021745658479E-4]:8.143916531135E1,(12[&rate=7.852497258477975E-4]:7.904433201738E1,((16[&rate=4.420479347821922E-4]:4.249565777432E1,((22[&rate=0.007236803347514898]:8.435189016241E-1,21[&rate=3.6559432702462587E-4]:8.435189016241E-1)[&rate=2.0874203179274505E-4]:2.296540134592E0,20[&rate=0.0022045668482277873]:3.140059036216E0)[&rate=0.0013269492615378706]:3.93555987381E1)[&rate=0.0012232415092133051]:3.3195017367E1,(((30[&rate=6.322530459835106E-4]:6.303375848626E1,26[&rate=5.224021745658479E-4]:6.303375848626E1)[&rate=0.0019488454321163384]:5.533605802785E0,32[&rate=5.434023146856892E-4]:6.856736428905E1)[&rate=4.0350479223239113E-4]:6.594491148246E0,((((4[&rate=6.322530459835106E-4]:6.290119043669E-1,3[&rate=0.007236803347514898]:6.290119043669E-1)[&rate=0.0016619852085184733]:1.347508279638E-1,2[&rate=0.0010107092856123723]:7.637627323307E-1)[&rate=0.0015118590250623053]:7.009647841041E0,5[&rate=3.089667911696571E-4]:7.773410573371E0)[&rate=0.002362597073626008]:6.154429127538E-1,((6[&rate=9.742764086127082E-4]:5.534208323989E0,7[&rate=6.802064832929527E-4]:5.534208323989E0)[&rate=0.0010107092856123723]:6.638088782582E-1,1[&rate=7.852497258477975E-4]:6.198017202247E0)[&rate=0.0010489081494616018]:2.190836283878E0)[&rate=4.815738197040346E-4]:6.677300195117E1)[&rate=2.0874203179274505E-4]:5.288197040292E-1)[&rate=0.0011313246803090961]:3.353656876053E0)[&rate=2.898637548441505E-4]:2.394833293972E0)[&rate=7.852497258477975E-4]:6.393713404125E-1,((((11[&rate=3.6559432702462587E-4]:1.224039862114E1,29[&rate=5.648458268033617E-4]:1.224039862114E1)[&rate=6.802064832929527E-4]:6.75178419617E1,(33[&rate=6.558960257922692E-4]:7.652100015676E1,13[&rate=4.6166765865036214E-4]:7.652100015676E1)[&rate=0.002362597073626008]:3.237240426083E0)[&rate=0.003980780460395201]:7.195961936941E-2,(19[&rate=3.278987722173E-4]:4.871005975689E1,18[&rate=2.0874203179274505E-4]:4.871005975689E1)[&rate=6.558960257922692E-4]:3.112014044532E1)[&rate=8.830197446938774E-5]:1.166485174347E0,((10[&rate=3.6559432702462587E-4]:6.460730076639E1,31[&rate=2.704752458917994E-4]:6.460730076639E1)[&rate=0.001445598936565789]:1.632387220284E1,23[&rate=6.802064832929527E-4]:8.093117296922E1)[&rate=0.003980780460395201]:6.55124073333E-2)[&rate=9.061117169393191E-4]:1.081851275203E0)[&rate=1.8583754139810886E-4]:1.801877816145E0,(17[&rate=0.001445598936565789]:4.453465969247E1,(27[&rate=5.018056947016706E-4]:3.084121227728E1,28[&rate=0.0011759685359490231]:3.084121227728E1)[&rate=0.0027762329515066088]:1.369344741518E1)[&rate=2.704752458917994E-4]:3.934575477544E1)[&rate=0.0015836838539062658]:3.815427081448E1); +tree STATE_60000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55111.62792429199,EEF_ucld_branchRates=-266.168517335019,lnP=-55111.62792429199,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.538992658048271E-4]:7.441056715106E0,9[&rate=9.941617356538372E-4]:7.441056715106E0)[&rate=3.078494413972936E-4]:4.457040316086E0,15[&rate=4.7158036587329773E-4]:1.189809703119E1)[&rate=8.556137160290516E-4]:8.571050538679E1,(14[&rate=0.0018429462297447567]:3.268110138571E1,24[&rate=0.0010947148054252292]:3.268110138571E1)[&rate=0.0011721106878371922]:6.492750103227E1)[&rate=0.0018429462297447567]:1.567116142431E1,(((25[&rate=7.203735562568342E-4]:7.56375733171E1,(12[&rate=7.626006135236245E-4]:7.354483027568E1,((16[&rate=6.240260728132073E-4]:3.949975758157E1,((22[&rate=0.0042357314335145875]:9.64847288426E-1,21[&rate=7.203735562568342E-4]:9.64847288426E-1)[&rate=8.075161398525856E-4]:2.318192825252E0,20[&rate=9.350955151799289E-4]:3.283040113678E0)[&rate=0.0012147692562342583]:3.621671746789E1)[&rate=0.0014874701096311014]:3.092740425895E1,(((((4[&rate=2.282049761452876E-4]:6.368219969635E-1,3[&rate=0.0011721106878371922]:6.368219969635E-1)[&rate=0.0010947148054252292]:2.033548134021E-1,2[&rate=3.9149767996290004E-4]:8.401768103657E-1)[&rate=0.0013638018675086931]:5.857240068021E0,5[&rate=2.503732783304687E-4]:6.697416878386E0)[&rate=3.9149767996290004E-4]:1.439794968704E0,((6[&rate=3.4231849734131373E-4]:6.211397536231E0,7[&rate=2.282049761452876E-4]:6.211397536231E0)[&rate=9.350955151799289E-4]:4.677496965037E-1,1[&rate=4.877300137101249E-4]:6.679147232735E0)[&rate=7.001374737842162E-4]:1.458064614355E0)[&rate=5.204396049472888E-4]:6.147952269519E1,((30[&rate=8.311323122272067E-4]:5.588779470208E1,26[&rate=6.240260728132073E-4]:5.588779470208E1)[&rate=0.0012605854925909956]:8.164562974057E0,32[&rate=4.075588761986994E-4]:6.405235767613E1)[&rate=3.5894856884965536E-4]:5.564376866147E0)[&rate=0.001972563025191415]:8.104272982359E-1)[&rate=8.810399999078945E-4]:3.117668435158E0)[&rate=6.424070622738159E-4]:2.092743041423E0)[&rate=0.002132516978724837]:7.70792623924E-1,((((11[&rate=5.040060712953338E-4]:1.203374014899E1,29[&rate=9.941617356538372E-4]:1.203374014899E1)[&rate=6.424070622738159E-4]:6.088935008872E1,(33[&rate=6.240260728132073E-4]:7.123885267469E1,13[&rate=6.060170561093041E-4]:7.123885267469E1)[&rate=0.0014874701096311014]:1.684237563027E0)[&rate=0.0017343714012775131]:5.62794630855E-1,(19[&rate=3.9149767996290004E-4]:3.983278390526E1,18[&rate=2.706758974187468E-4]:3.983278390526E1)[&rate=4.7158036587329773E-4]:3.365310096331E1)[&rate=1.2605267246977003E-4]:1.764305042757E0,((10[&rate=2.503732783304687E-4]:6.156727654509E1,31[&rate=3.253276804452044E-4]:6.156727654509E1)[&rate=6.060170561093041E-4]:1.309452771813E1,23[&rate=5.204396049472888E-4]:7.466180426322E1)[&rate=0.0026295046194605392]:5.883856481089E-1)[&rate=0.0013100567752042192]:1.158176029695E0)[&rate=5.370607698027861E-4]:8.160042843674E-1,(17[&rate=0.0014226033469815042]:3.806468735737E1,(27[&rate=5.204396049472888E-4]:2.555940916135E1,28[&rate=0.0014874701096311014]:2.555940916135E1)[&rate=0.0023396740775661184]:1.250527819602E1)[&rate=2.8971288388195165E-4]:3.915968286802E1)[&rate=0.001025912059695766]:3.60553936169E1); +tree STATE_70000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55138.73121008681,EEF_ucld_branchRates=-266.168517335019,lnP=-55138.73121008681,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.9622805302690165E-4]:9.336339779033E0,9[&rate=6.950698531018992E-4]:9.336339779033E0)[&rate=0.0013369471148943913]:3.684544845771E0,15[&rate=8.661703409047905E-4]:1.30208846248E1)[&rate=8.244262204180266E-4]:8.305246056496E1,(14[&rate=0.0016676280406441328]:3.249811898593E1,24[&rate=0.0011331874188382682]:3.249811898593E1)[&rate=8.880983732002431E-4]:6.357522620384E1)[&rate=0.0016676280406441328]:1.197484699169E1,(((25[&rate=7.298730881563027E-4]:7.498477612847E1,(12[&rate=7.851143181163521E-4]:7.384891653046E1,(((30[&rate=3.9622805302690165E-4]:5.779709332218E1,26[&rate=5.665974217404584E-4]:5.779709332218E1)[&rate=0.0011331874188382682]:6.386094690859E0,32[&rate=3.0336898636978835E-4]:6.418318801304E1)[&rate=0.0013369471148943913]:7.60320199624E0,(((((4[&rate=7.298730881563027E-4]:7.824859916362E-1,3[&rate=0.001888900440273807]:7.824859916362E-1)[&rate=5.820104466163687E-4]:2.351825373114E-1,2[&rate=4.1260439055997304E-4]:1.017668528948E0)[&rate=5.665974217404584E-4]:6.163222423978E0,5[&rate=9.845765058870604E-4]:7.180890952926E0)[&rate=4.752227132376784E-4]:1.763636015765E0,((6[&rate=0.0016676280406441328]:5.135570696733E0,7[&rate=0.0013888214110897104]:5.135570696733E0)[&rate=5.056831750804117E-4]:1.460987387415E0,1[&rate=5.512874401353108E-4]:6.596558084147E0)[&rate=4.443418730257761E-4]:2.347968884544E0)[&rate=5.208612524465843E-4]:6.108029195486E1,(16[&rate=3.619050584119115E-4]:3.6520018687E1,((22[&rate=0.0033935492636631473]:1.48315984312E0,21[&rate=8.44966955104092E-4]:1.48315984312E0)[&rate=9.589656995612495E-4]:2.09807087363E0,20[&rate=6.452368670087717E-4]:3.58123071675E0)[&rate=0.0010689891750371378]:3.293878797025E1)[&rate=6.615717311686381E-4]:3.350480023655E1)[&rate=0.0016676280406441328]:1.761571085727E0)[&rate=0.0011683048900951976]:2.062526521183E0)[&rate=0.0010113597237330911]:1.135859598007E0)[&rate=6.781730438780525E-4]:1.302673375147E0,((((11[&rate=9.344134471599295E-4]:1.453286174169E1,29[&rate=6.781730438780525E-4]:1.453286174169E1)[&rate=7.298730881563027E-4]:5.866303209169E1,(33[&rate=6.452368670087717E-4]:7.112819473435E1,13[&rate=3.0336898636978835E-4]:7.112819473435E1)[&rate=0.0012461080996574643]:2.067699099029E0)[&rate=9.845765058870604E-4]:1.055898309625E0,(19[&rate=3.0336898636978835E-4]:3.431880231909E1,18[&rate=3.0336898636978835E-4]:3.431880231909E1)[&rate=5.975540232372116E-4]:3.993298982391E1)[&rate=5.820104466163687E-4]:5.725379002252E-1,((10[&rate=3.0336898636978835E-4]:5.471499156246E1,31[&rate=3.0336898636978835E-4]:5.471499156246E1)[&rate=4.443418730257761E-4]:1.888915835567E1,23[&rate=6.615717311686381E-4]:7.360414991813E1)[&rate=0.0012896237035172923]:1.220180125097E0)[&rate=4.443418730257761E-4]:1.46311946039E0)[&rate=0.0011331874188382682]:6.725952283217E-1,(17[&rate=0.0011001659448224704]:4.359805049111E1,(27[&rate=5.820104466163687E-4]:2.583337956488E1,28[&rate=0.002044480977136792]:2.583337956488E1)[&rate=0.002598532484464891]:1.776467092623E1)[&rate=1.6885972985721553E-4]:3.336199424082E1)[&rate=0.0012461080996574643]:3.108814744952E1); +tree STATE_80000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55145.25448843567,EEF_ucld_branchRates=-266.168517335019,lnP=-55145.25448843567,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.4115803323881084E-4]:7.730418688466E0,9[&rate=4.8582984398326133E-4]:7.730418688466E0)[&rate=0.0015029454472448214]:4.555665981403E0,15[&rate=2.929119239390291E-4]:1.228608466987E1)[&rate=9.038239677579695E-4]:8.575253524172E1,(14[&rate=0.0018153481748545816]:3.088958858763E1,24[&rate=0.001206556378374931]:3.088958858763E1)[&rate=0.0010854773246533438]:6.714903132396E1)[&rate=0.0016905037389932677]:1.806732980832E1,(((25[&rate=5.148665264022944E-4]:7.404513710398E1,(12[&rate=7.87990473049401E-4]:7.275101385145E1,((16[&rate=4.5718575932360956E-4]:3.951070771191E1,((22[&rate=0.003398712838132031]:1.101599879702E0,21[&rate=4.7147248175570403E-4]:1.101599879702E0)[&rate=6.391416055963323E-4]:2.209371891174E0,20[&rate=9.578429825210946E-4]:3.310971770877E0)[&rate=0.001254008478669916]:3.619973594103E1)[&rate=8.786821208918897E-4]:3.243812438517E1,(((((4[&rate=9.578429825210946E-4]:6.801926081158E-1,3[&rate=0.001206556378374931]:6.801926081158E-1)[&rate=5.002856381733146E-4]:2.004777936722E-1,2[&rate=2.5634129761138626E-4]:8.80670401788E-1)[&rate=0.001588698406335788]:6.603550333511E0,5[&rate=8.546237643404725E-4]:7.484220735299E0)[&rate=2.5634129761138626E-4]:9.774235785752E-1,((6[&rate=0.0013061597193515032]:4.94063074717E0,7[&rate=6.22614097591786E-4]:4.94063074717E0)[&rate=5.749572315145197E-4]:4.851998148798E-1,1[&rate=2.3551854684889613E-4]:5.42583056205E0)[&rate=0.0010505902680888546]:3.035813751824E0)[&rate=5.002856381733146E-4]:6.124857619653E1,((30[&rate=6.064272903252232E-4]:5.7033514808E1,26[&rate=8.093622990581231E-4]:5.7033514808E1)[&rate=0.0010178547718703056]:7.766485284444E0,32[&rate=3.8568335064909873E-4]:6.480000009244E1)[&rate=6.064272903252232E-4]:4.910220417966E0)[&rate=5.905511838967516E-4]:2.238611586668E0)[&rate=9.038239677579695E-4]:8.021817543764E-1)[&rate=0.0018153481748545816]:1.294123252527E0)[&rate=1.8220053590731192E-4]:1.000062187401E0,((((11[&rate=7.093280651016263E-4]:1.687652604497E1,29[&rate=0.0011630303899414385]:1.687652604497E1)[&rate=5.295984699066617E-4]:5.411608115147E1,(33[&rate=7.67361090410561E-4]:6.775219023821E1,13[&rate=2.5634129761138626E-4]:6.775219023821E1)[&rate=9.301660316650421E-4]:3.240416958232E0)[&rate=6.910969784660186E-4]:8.29389840526E-1,(19[&rate=3.4115803323881084E-4]:2.572577847674E1,18[&rate=3.562724373323399E-4]:2.572577847674E1)[&rate=2.5634129761138626E-4]:4.609621856022E1)[&rate=5.295984699066617E-4]:1.478633685752E0,((10[&rate=3.8568335064909873E-4]:5.001201933281E1,31[&rate=2.5634129761138626E-4]:5.001201933281E1)[&rate=5.596180429418019E-4]:2.25852457058E1,23[&rate=5.749572315145197E-4]:7.259726503861E1)[&rate=4.2870421720444336E-4]:7.033656841102E-1)[&rate=6.733479110147295E-4]:1.744568568661E0)[&rate=5.148665264022944E-4]:1.360400243918E0,(17[&rate=0.0013640268187175902]:4.172366642007E1,(27[&rate=7.474111308410958E-4]:2.313692969284E1,28[&rate=0.0015029454472448214]:2.313692969284E1)[&rate=0.002554046860737086]:1.858673672723E1)[&rate=3.8568335064909873E-4]:3.468193311523E1)[&rate=0.0010178547718703056]:3.970035018461E1); +tree STATE_90000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55109.47699107278,EEF_ucld_branchRates=-266.168517335019,lnP=-55109.47699107278,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.840336032317837E-4]:8.00398581167E0,9[&rate=7.996705929676291E-4]:8.00398581167E0)[&rate=0.0014386574635264692]:4.859605983213E0,15[&rate=4.574617847737402E-4]:1.286359179488E1)[&rate=8.710810382463166E-4]:8.198376615948E1,(14[&rate=0.0015300484901014898]:3.339364268139E1,24[&rate=9.251839205020714E-4]:3.339364268139E1)[&rate=8.223565153603983E-4]:6.145371527297E1)[&rate=0.0023036185151446317]:2.462025436272E1,(((25[&rate=5.832290110216934E-4]:7.610092648574E1,(12[&rate=0.0010197589318503301]:7.534951292095E1,((16[&rate=5.251267633510919E-4]:4.154891537441E1,((22[&rate=0.003058105656467023]:1.375737760733E0,21[&rate=8.973809022793283E-4]:1.375737760733E0)[&rate=5.536211736633264E-4]:2.567680865564E0,20[&rate=1.265709828220229E-4]:3.943418626297E0)[&rate=0.0011847522586602493]:3.760549674811E1)[&rate=8.223565153603983E-4]:3.094262524976E1,(((((4[&rate=7.177913733427153E-4]:8.997987242125E-1,3[&rate=0.0011378383609239545]:8.997987242125E-1)[&rate=4.4435296088165687E-4]:3.66102703311E-1,2[&rate=3.665560212117038E-4]:1.265901427523E0)[&rate=0.0013616385891715836]:6.349056624805E0,5[&rate=7.779572115670539E-4]:7.614958052328E0)[&rate=2.3572080475706605E-4]:5.836908579268E-1,((6[&rate=0.0011378383609239545]:5.026110135662E0,7[&rate=3.1296143265109545E-4]:5.026110135662E0)[&rate=7.370933373164055E-4]:4.814374748305E-1,1[&rate=5.392478272761437E-4]:5.507547610492E0)[&rate=9.546847865187677E-4]:2.691101299763E0)[&rate=6.991557709965875E-4]:6.279682083793E1,((30[&rate=5.682725534011683E-4]:5.604966973092E1,26[&rate=4.840336032317837E-4]:5.604966973092E1)[&rate=8.223565153603983E-4]:8.000213498123E0,32[&rate=2.3572080475706605E-4]:6.404988322905E1)[&rate=2.5297723635343345E-4]:6.945586519142E0)[&rate=6.141735379833022E-4]:1.496070875981E0)[&rate=0.0012951798970701396]:2.85797229678E0)[&rate=3.1296143265109545E-4]:7.514135647915E-1)[&rate=4.4435296088165687E-4]:8.3790560267E-1,((((11[&rate=7.996705929676291E-4]:1.538753549877E1,29[&rate=5.536211736633264E-4]:1.538753549877E1)[&rate=6.811299194303528E-4]:5.520288286517E1,(33[&rate=6.467085072785578E-4]:6.76614109157E1,13[&rate=2.5297723635343345E-4]:6.76614109157E1)[&rate=0.0016420588709237201]:2.929007448241E0)[&rate=4.7068081942901126E-4]:2.457340157162E0,(19[&rate=4.574617847737402E-4]:3.028520216973E1,18[&rate=3.795675884008127E-4]:3.028520216973E1)[&rate=4.1836809950454817E-4]:4.276255635137E1)[&rate=2.3572080475706605E-4]:2.536913340953E0,((10[&rate=4.1836809950454817E-4]:4.641765959116E1,31[&rate=3.1296143265109545E-4]:4.641765959116E1)[&rate=6.467085072785578E-4]:2.789479115462E1,23[&rate=4.4435296088165687E-4]:7.431245074578E1)[&rate=9.546847865187677E-4]:1.272221116275E0)[&rate=5.392478272761437E-4]:1.354160226354E0)[&rate=2.6904767001578674E-4]:1.626858536892E0,(17[&rate=0.0012367895789387583]:4.927102556207E1,(27[&rate=3.534418824992192E-4]:2.572433588991E1,28[&rate=0.0016420588709237201]:2.572433588991E1)[&rate=0.0010951374403498251]:2.354668967216E1)[&rate=3.665560212117038E-4]:2.929466506324E1)[&rate=2.3572080475706605E-4]:4.090192169178E1); +tree STATE_100000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.610719796365,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.610719796365,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.462870198185977E-4]:7.613406890115E0,9[&rate=0.0010795542224252203]:7.613406890115E0)[&rate=0.0010279037202679709]:4.038953023627E0,15[&rate=5.058084490360357E-4]:1.165235991374E1)[&rate=9.382085606628969E-4]:8.363439517772E1,(14[&rate=0.0016587769037409892]:3.104747995178E1,24[&rate=0.0012035266156994505]:3.104747995178E1)[&rate=0.0013252441756373902]:6.423927513969E1)[&rate=0.002714463157534833]:2.304085551009E1,(((25[&rate=5.891003052335953E-4]:7.57172239732E1,(12[&rate=9.179741691323471E-4]:7.270659840141E1,((16[&rate=4.462870198185977E-4]:3.707765216092E1,((22[&rate=0.0021688636672918776]:1.169124745366E0,21[&rate=0.0010795542224252203]:1.169124745366E0)[&rate=0.0013745592288619457]:2.26824810425E0,20[&rate=6.866994961161355E-4]:3.437372849616E0)[&rate=8.795709381822285E-4]:3.364027931131E1)[&rate=9.592275750439442E-4]:3.473229590857E1,(((((4[&rate=0.001493830115503096]:1.442406040212E0,3[&rate=0.0011374333382258078]:1.442406040212E0)[&rate=8.795709381822285E-4]:1.240488783649E-1,2[&rate=6.303921094679419E-4]:1.566454918576E0)[&rate=9.179741691323471E-4]:5.90625832063E0,5[&rate=3.5655142794869523E-4]:7.472713239206E0)[&rate=0.0012405454944352697]:1.091966896939E0,((6[&rate=0.0016587769037409892]:4.943662557244E0,7[&rate=6.02823095812913E-4]:4.943662557244E0)[&rate=6.303921094679419E-4]:9.901832006604E-1,1[&rate=7.011565510435902E-4]:5.933845757904E0)[&rate=0.001493830115503096]:2.630834378241E0)[&rate=6.165786817065493E-4]:6.173075716229E1,((30[&rate=8.262481393526499E-4]:5.829898465996E1,26[&rate=5.891003052335953E-4]:5.829898465996E1)[&rate=6.303921094679419E-4]:7.205829497986E0,32[&rate=6.02823095812913E-4]:6.550481415795E1)[&rate=3.5655142794869523E-4]:4.790623140484E0)[&rate=0.0012405454944352697]:1.514510771059E0)[&rate=0.0013252441756373902]:8.966503319162E-1)[&rate=9.179741691323471E-4]:3.010625571795E0)[&rate=0.0010279037202679709]:1.68378577113E0,((((11[&rate=3.770718888829964E-4]:1.618303173566E1,29[&rate=5.753839216799205E-4]:1.618303173566E1)[&rate=7.612337052054933E-4]:5.551284596895E1,(33[&rate=7.306940729987538E-4]:6.858652272786E1,13[&rate=4.914218480606181E-4]:6.858652272786E1)[&rate=6.72417934702876E-4]:3.109354976753E0)[&rate=3.33600057416353E-4]:2.05260301805E0,(19[&rate=6.72417934702876E-4]:2.709217675338E1,18[&rate=7.011565510435902E-4]:2.709217675338E1)[&rate=3.959213752214245E-4]:4.665630396929E1)[&rate=2.726954591920745E-4]:1.704054153719E0,((10[&rate=5.058084490360357E-4]:4.432925327926E1,31[&rate=3.5655142794869523E-4]:4.432925327926E1)[&rate=8.094212003799486E-4]:2.992879470369E1,23[&rate=5.616457291361167E-4]:7.425804798295E1)[&rate=9.592275750439442E-4]:1.194486893431E0)[&rate=8.094212003799486E-4]:1.948474867952E0)[&rate=7.158131383394664E-4]:1.795279964466E0,(17[&rate=8.435195717659292E-4]:5.766968031465E1,(27[&rate=4.1355636632161864E-4]:3.155778232493E1,28[&rate=0.0012808853385523006]:3.155778232493E1)[&rate=0.001003970407794378]:2.611189798972E1)[&rate=4.462870198185977E-4]:2.152660939415E1)[&rate=4.914218480606181E-4]:3.913132089275E1); +tree STATE_110000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55141.547827532675,EEF_ucld_branchRates=-266.168517335019,lnP=-55141.547827532675,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.50490203711985E-4]:7.520816953548E0,9[&rate=9.286864176622678E-4]:7.520816953548E0)[&rate=5.940393853311583E-4]:3.917336941711E0,15[&rate=7.293565623128751E-4]:1.143815389526E1)[&rate=9.519716952779099E-4]:8.234198355467E1,(14[&rate=0.00169624325075304]:3.123124625893E1,24[&rate=0.0014603098379207488]:3.123124625893E1)[&rate=0.0011676980479827731]:6.254889119099E1)[&rate=0.0019073845388496312]:1.9988632576E1,(((25[&rate=7.92834364602894E-4]:7.35458547101E1,(12[&rate=8.099958106489196E-4]:7.177458369802E1,((16[&rate=3.1576595208278714E-4]:3.398766808487E1,((22[&rate=0.0014603098379207488]:1.280910172517E0,21[&rate=3.948932920659541E-4]:1.280910172517E0)[&rate=0.0011676980479827731]:2.207916077109E0,20[&rate=0.0010028077366255684]:3.488826249626E0)[&rate=0.001210979099976398]:3.049884183525E1)[&rate=8.654872792053596E-4]:3.682827657737E1,(((((4[&rate=6.322231815460089E-4]:1.22241696622E0,3[&rate=0.0011287614642904497]:1.22241696622E0)[&rate=3.948932920659541E-4]:2.664836783668E-1,2[&rate=9.286864176622678E-4]:1.488900644586E0)[&rate=0.0010933480764393029]:5.790307684552E0,5[&rate=4.346682322488961E-4]:7.279208329138E0)[&rate=7.601564484345011E-4]:8.632197662523E-1,((6[&rate=4.346682322488961E-4]:5.151545102416E0,7[&rate=6.193277607317895E-4]:5.151545102416E0)[&rate=5.57051417619346E-4]:7.812374413602E-1,1[&rate=3.1576595208278714E-4]:5.932782543776E0)[&rate=0.001259743050354543]:2.209645551615E0)[&rate=5.327820955731157E-4]:6.072570595604E1,((30[&rate=6.322231815460089E-4]:5.512236356622E1,26[&rate=5.57051417619346E-4]:5.512236356622E1)[&rate=5.57051417619346E-4]:7.617389818675E0,32[&rate=4.965251106693781E-4]:6.27397533849E1)[&rate=5.57051417619346E-4]:6.128380666532E0)[&rate=5.207001733109903E-4]:1.94781061081E0)[&rate=6.193277607317895E-4]:9.586390357789E-1)[&rate=9.519716952779099E-4]:1.771271012081E0)[&rate=3.1576595208278714E-4]:1.350868452503E0,((((11[&rate=5.086228024720246E-4]:1.56507010522E1,29[&rate=6.721795119442003E-4]:1.56507010522E1)[&rate=7.92834364602894E-4]:5.466278725722E1,(33[&rate=5.940393853311583E-4]:6.445982541689E1,13[&rate=5.327820955731157E-4]:6.445982541689E1)[&rate=0.0010933480764393029]:5.853662892523E0)[&rate=8.462526086776752E-4]:3.505714332459E-1,(19[&rate=7.92834364602894E-4]:2.193018447118E1,18[&rate=5.327820955731157E-4]:2.193018447118E1)[&rate=7.14559812335083E-4]:4.873387527148E1)[&rate=7.293565623128751E-4]:1.524089096682E0,((10[&rate=3.6603982548435483E-4]:4.33270149128E1,31[&rate=3.50490203711985E-4]:4.33270149128E1)[&rate=7.14559812335083E-4]:2.722695932296E1,23[&rate=6.066068731726846E-4]:7.055397423576E1)[&rate=1.9332936176757204E-4]:1.634174603585E0)[&rate=4.47343344707378E-4]:2.708574323262E0)[&rate=8.27780186392064E-4]:3.39497493835E-1,(17[&rate=0.0010933480764393029]:5.132139509379E1,(27[&rate=3.948932920659541E-4]:2.844001942234E1,28[&rate=0.0013156319960538113]:2.844001942234E1)[&rate=4.47343344707378E-4]:2.288137567145E1)[&rate=3.1576595208278714E-4]:2.391482556265E1)[&rate=9.065974314674346E-4]:3.853254936949E1); +tree STATE_120000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55154.173673600235,EEF_ucld_branchRates=-266.168517335019,lnP=-55154.173673600235,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.464075729485166E-4]:6.894738316127E0,9[&rate=0.0013243260626542945]:6.894738316127E0)[&rate=9.272019487734993E-4]:4.955400297482E0,15[&rate=9.99216384659642E-4]:1.185013861361E1)[&rate=9.272019487734993E-4]:8.88505855867E1,(14[&rate=0.0018937393351503157]:3.302690339376E1,24[&rate=0.0010258265761553685]:3.302690339376E1)[&rate=0.001188216554459461]:6.767382080655E1)[&rate=7.732081732316908E-4]:1.530033882335E1,(((25[&rate=7.403526590562529E-4]:7.076175145544E1,(12[&rate=8.44814349404329E-4]:6.876717803406E1,((16[&rate=4.602354359926559E-4]:3.165665689879E1,((22[&rate=0.0014461054736281227]:1.341957233871E0,21[&rate=3.5523645554179947E-4]:1.341957233871E0)[&rate=7.090352910159318E-4]:2.614305780645E0,20[&rate=6.500135604880283E-4]:3.956263014515E0)[&rate=0.001188216554459461]:2.770039388427E1)[&rate=7.732081732316908E-4]:3.57432216027E1,(((30[&rate=5.407175082600761E-4]:5.425838053585E1,26[&rate=5.141122490362602E-4]:5.425838053585E1)[&rate=0.001274147349128285]:6.358344212722E0,32[&rate=4.0317894405439577E-4]:6.061672474857E1)[&rate=6.218805187054008E-4]:5.365347918135E0,((((4[&rate=3.3738117069304996E-4]:1.462545894205E0,3[&rate=8.843872271832056E-4]:1.462545894205E0)[&rate=8.44814349404329E-4]:4.898598475008E-2,2[&rate=5.674169733732039E-4]:1.511531878956E0)[&rate=0.0017331571253535554]:5.73507839957E0,5[&rate=3.5523645554179947E-4]:7.246610278526E0)[&rate=0.0027190733632002934]:1.02019123716E0,((6[&rate=0.001084059085312935]:6.039240334773E0,7[&rate=2.964009294232079E-4]:6.039240334773E0)[&rate=8.44814349404329E-4]:7.738652988934E-1,1[&rate=4.0317894405439577E-4]:6.813105633666E0)[&rate=8.44814349404329E-4]:1.45369588202E0)[&rate=5.141122490362602E-4]:5.771527115102E1)[&rate=4.602354359926559E-4]:1.417805834779E0)[&rate=6.500135604880283E-4]:1.367299532571E0)[&rate=0.0010258265761553685]:1.994573421387E0)[&rate=3.180011194706097E-4]:8.530114117867E-1,((((11[&rate=6.500135604880283E-4]:1.476092703484E1,29[&rate=0.001274147349128285]:1.476092703484E1)[&rate=6.218805187054008E-4]:5.35180454369E1,(33[&rate=5.674169733732039E-4]:6.214744283233E1,13[&rate=3.8790249416495063E-4]:6.214744283233E1)[&rate=5.674169733732039E-4]:6.131529639413E0)[&rate=2.395096849457106E-4]:1.17705878522E0,(19[&rate=7.732081732316908E-4]:1.97247441787E1,18[&rate=5.808647694148932E-4]:1.97247441787E1)[&rate=3.180011194706097E-4]:4.973128707826E1)[&rate=6.643869019699526E-4]:1.064786018358E0,((10[&rate=5.674169733732039E-4]:3.947276207218E1,31[&rate=6.218805187054008E-4]:3.947276207218E1)[&rate=5.540426047106384E-4]:2.963466331671E1,23[&rate=5.808647694148932E-4]:6.910742538889E1)[&rate=7.565703719147858E-4]:1.41339188643E0)[&rate=9.99216384659642E-4]:1.093945591912E0)[&rate=9.740110750474953E-4]:5.55415701324E-1,(17[&rate=0.001188216554459461]:4.68644512369E1,(27[&rate=4.602354359926559E-4]:2.679884166948E1,28[&rate=0.0012291027192541909]:2.679884166948E1)[&rate=0.001615432623779576]:2.006560956743E1)[&rate=3.3738117069304996E-4]:2.530572733165E1)[&rate=0.0014461054736281227]:4.383088445511E1); +tree STATE_130000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55134.29812699747,EEF_ucld_branchRates=-266.168517335019,lnP=-55134.29812699747,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.746466206254376E-4]:8.04342410646E0,9[&rate=0.0012317549071632617]:8.04342410646E0)[&rate=5.864869576651052E-4]:6.772822543536E0,15[&rate=7.864793919071311E-4]:1.481624665E1)[&rate=0.0010754468973270001]:8.767837692771E1,(14[&rate=0.001711629671016008]:3.468317771941E1,24[&rate=0.0010754468973270001]:3.468317771941E1)[&rate=0.0010754468973270001]:6.78114458583E1)[&rate=5.864869576651052E-4]:1.731282017968E1,(((25[&rate=6.204245512211303E-4]:7.741650799679E1,(12[&rate=7.304375649280302E-4]:7.661602892134E1,((16[&rate=7.864793919071311E-4]:3.401569308452E1,((22[&rate=0.0010455046652213318]:2.954821126741E0,21[&rate=5.64173362973324E-4]:2.954821126741E0)[&rate=5.195806974377646E-4]:2.164395789584E0,20[&rate=7.172956215957431E-4]:5.119216916325E0)[&rate=8.499974923057563E-4]:2.889647616819E1)[&rate=9.047551366418572E-4]:4.052142303988E1,(((30[&rate=6.09024914996524E-4]:5.814169228641E1,26[&rate=7.044394263810241E-4]:5.814169228641E1)[&rate=0.0010455046652213318]:7.520834143814E0,32[&rate=3.2811454106134884E-4]:6.566252643023E1)[&rate=3.0472402275699993E-4]:7.25591523416E0,((((4[&rate=9.047551366418572E-4]:1.551181400635E0,3[&rate=5.97718528602318E-4]:1.551181400635E0)[&rate=7.304375649280302E-4]:2.838064584064E-1,2[&rate=8.171107958677214E-4]:1.834987859042E0)[&rate=0.0013510180112044363]:5.676347810911E0,5[&rate=4.737239446888099E-4]:7.511335669953E0)[&rate=3.2811454106134884E-4]:1.336932703833E0,((6[&rate=9.459967613671627E-4]:6.510031892631E0,7[&rate=5.64173362973324E-4]:6.510031892631E0)[&rate=6.204245512211303E-4]:5.08381000173E-1,1[&rate=4.737239446888099E-4]:7.018412892804E0)[&rate=7.718786101049073E-4]:1.829855480981E0)[&rate=3.9660626545822797E-4]:6.40701732906E1)[&rate=5.64173362973324E-4]:1.618674460006E0)[&rate=0.0011445555996177478]:2.078912796946E0)[&rate=8.499974923057563E-4]:8.004790754527E-1)[&rate=9.248215828532215E-4]:1.462351933742E0,((((11[&rate=4.107212485472749E-4]:1.93938664652E1,29[&rate=5.195806974377646E-4]:1.93938664652E1)[&rate=6.319359021461921E-4]:5.493571917377E1,(33[&rate=6.435776683433503E-4]:6.835380783631E1,13[&rate=4.371143810774692E-4]:6.835380783631E1)[&rate=3.655666961847396E-4]:5.975777802661E0)[&rate=3.9660626545822797E-4]:1.822499942161E0,(19[&rate=4.737239446888099E-4]:2.173175789752E1,18[&rate=4.2417831370062276E-4]:2.173175789752E1)[&rate=6.794802360014019E-4]:5.442032768362E1)[&rate=9.248215828532215E-4]:1.428631940265E0,((10[&rate=5.5305257858064E-4]:3.71742858378E1,31[&rate=5.753115823265633E-4]:3.71742858378E1)[&rate=4.737239446888099E-4]:3.882370578792E1,23[&rate=5.419285262198658E-4]:7.599799162572E1)[&rate=0.0013510180112044363]:1.582725895679E0)[&rate=6.09024914996524E-4]:1.298142409133E0)[&rate=9.248215828532215E-4]:2.268417797542E0,(17[&rate=0.0010455046652213318]:5.978852780956E1,(27[&rate=7.864793919071311E-4]:2.34577512022E1,28[&rate=0.0012317549071632617]:2.34577512022E1)[&rate=7.718786101049073E-4]:3.633077660736E1)[&rate=3.2811454106134884E-4]:2.135874991852E1)[&rate=0.0020864102706770063]:3.866016602932E1); +tree STATE_140000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55123.318440039904,EEF_ucld_branchRates=-266.168517335019,lnP=-55123.318440039904,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.2610944757178773E-4]:8.100348835544E0,9[&rate=4.8259875059779186E-4]:8.100348835544E0)[&rate=4.0828215427904407E-4]:6.72393723696E0,15[&rate=5.474857071412316E-4]:1.48242860725E1)[&rate=8.362014938219918E-4]:1.105875018757E2,(14[&rate=0.00127461683461126]:3.924864519168E1,24[&rate=9.303422800834102E-4]:3.924864519168E1)[&rate=8.160472256127162E-4]:8.616314275655E1)[&rate=8.801768387971485E-4]:1.635560486929E-1,(((25[&rate=6.055075835468503E-4]:8.327359303646E1,(12[&rate=7.446361919617098E-4]:7.961203950595E1,(((30[&rate=4.403672785245958E-4]:6.082687648192E1,26[&rate=6.17781800624785E-4]:6.082687648192E1)[&rate=4.720305350992812E-4]:6.995817807679E0,32[&rate=3.390429813130828E-4]:6.78226942896E1)[&rate=3.8626697247211E-4]:9.163156356647E0,(((((4[&rate=6.303340564246787E-4]:9.993056958344E-1,3[&rate=6.983063769341877E-4]:9.993056958344E-1)[&rate=6.983063769341877E-4]:4.281548583529E-1,2[&rate=7.969214750817959E-4]:1.427460554187E0)[&rate=9.88993323069879E-4]:6.530793234915E0,5[&rate=2.432601331508061E-4]:7.958253789103E0)[&rate=0.00165826860150968]:1.293411598405E0,((6[&rate=8.160472256127162E-4]:6.657488055542E0,7[&rate=3.8626697247211E-4]:6.657488055542E0)[&rate=4.932069863011902E-4]:7.267305943586E-1,1[&rate=4.8259875059779186E-4]:7.3842186499E0)[&rate=3.973614792440707E-4]:1.867446737607E0)[&rate=5.038737913595232E-4]:6.695044356512E1,(16[&rate=5.364053040101712E-4]:3.970580945134E1,((22[&rate=8.362014938219918E-4]:2.241232121523E0,21[&rate=4.932069863011902E-4]:2.241232121523E0)[&rate=6.839032865688442E-4]:3.107858990106E0,20[&rate=2.641148844200462E-4]:5.349091111629E0)[&rate=0.0011501121147654823]:3.435671833971E1)[&rate=9.88993323069879E-4]:3.649629950128E1)[&rate=5.038737913595232E-4]:7.837416936232E-1)[&rate=9.584173679758075E-4]:2.626188859702E0)[&rate=2.819360972901464E-4]:3.661553530512E0)[&rate=6.983063769341877E-4]:2.027960023411E0,((((11[&rate=3.5142021644951545E-4]:1.618778659902E1,29[&rate=5.587146957332018E-4]:1.618778659902E1)[&rate=7.446361919617098E-4]:6.079227204316E1,(33[&rate=6.431914152875997E-4]:6.560727895047E1,13[&rate=3.124569259614268E-4]:6.560727895047E1)[&rate=9.88993323069879E-4]:1.137277969171E1)[&rate=9.88993323069879E-4]:7.666808259532E-1,(19[&rate=6.431914152875997E-4]:1.978889026477E1,18[&rate=4.614830385342161E-4]:1.978889026477E1)[&rate=2.641148844200462E-4]:5.795784920336E1)[&rate=0.0010225948282694883]:1.359538413507E0,((10[&rate=5.254551380993314E-4]:3.050589371877E1,31[&rate=5.038737913595232E-4]:3.050589371877E1)[&rate=4.2975347275224827E-4]:4.799651315925E1,23[&rate=5.254551380993314E-4]:7.850240687802E1)[&rate=0.00127461683461126]:6.038710036202E-1)[&rate=3.633598807069271E-4]:6.195275178231E0)[&rate=1.7387575287274755E-4]:4.690957498015E0,(17[&rate=6.983063769341877E-4]:6.705210370777E1,(27[&rate=3.124569259614268E-4]:2.96027937904E1,28[&rate=0.001206508413483346]:2.96027937904E1)[&rate=7.787079174828098E-4]:3.744930991737E1)[&rate=5.474857071412316E-4]:2.294040685012E1)[&rate=0.0020667660093677334]:3.558283343905E1); +tree STATE_150000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.98063991054,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.98063991054,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.661735128331768E-4]:7.200051163198E0,9[&rate=5.796657031877729E-4]:7.200051163198E0)[&rate=6.101319383284094E-4]:6.112187999569E0,15[&rate=7.869261066120358E-4]:1.331223916277E1)[&rate=7.089347965826835E-4]:1.073855653225E2,(14[&rate=0.0011275459807763462]:4.255307530427E1,24[&rate=9.951857149870663E-4]:4.255307530427E1)[&rate=9.696615496840445E-4]:7.814472918097E1)[&rate=7.461951935550931E-4]:3.029229338476E-1,((((12[&rate=8.166006596151494E-4]:7.535763898988E1,((16[&rate=5.196524268235083E-4]:3.4696837776E1,((22[&rate=0.0010538835846029863]:1.967262779693E0,21[&rate=5.496624879427196E-4]:1.967262779693E0)[&rate=3.8361518639765905E-4]:3.363979701499E0,20[&rate=0.0011730999155698592]:5.331242481191E0)[&rate=0.001526202845367975]:2.936559529481E1)[&rate=6.631589777639994E-4]:3.964779394286E1,(((30[&rate=4.571856033097431E-4]:5.701630741736E1,26[&rate=5.9989760157916E-4]:5.701630741736E1)[&rate=8.844059633217363E-4]:6.817733792728E0,32[&rate=5.69635397676367E-4]:6.383404121009E1)[&rate=5.69635397676367E-4]:8.461248649404E0,((((4[&rate=4.993731107900506E-4]:1.12034774026E0,3[&rate=5.496624879427196E-4]:1.12034774026E0)[&rate=6.101319383284094E-4]:3.448786200057E-1,2[&rate=9.696615496840445E-4]:1.465226360266E0)[&rate=7.210293230858545E-4]:7.358230917016E0,5[&rate=5.596400446877393E-4]:8.823457277282E0)[&rate=8.844059633217363E-4]:2.091051171275E0,((6[&rate=6.101319383284094E-4]:6.011406081421E0,7[&rate=6.74261616478531E-4]:6.011406081421E0)[&rate=3.974315495277633E-4]:9.583273343074E-1,1[&rate=5.396848465667537E-4]:6.969733415729E0)[&rate=8.488649392876873E-4]:3.944775032828E0)[&rate=5.796657031877729E-4]:6.138078141094E1)[&rate=0.0012957717983381023]:2.04934185937E0)[&rate=9.241928554656191E-4]:1.013007271013E0)[&rate=2.36207149547626E-4]:1.451614008422E0,25[&rate=6.74261616478531E-4]:7.68092529983E1)[&rate=3.5234113298198284E-4]:2.327745009572E0,((((11[&rate=9.696615496840445E-4]:1.600230790785E1,29[&rate=4.680232692012413E-4]:1.600230790785E1)[&rate=8.166006596151494E-4]:5.806983411195E1,(33[&rate=7.461951935550931E-4]:6.260878591844E1,13[&rate=7.461951935550931E-4]:6.260878591844E1)[&rate=6.97126026886174E-4]:1.146335610137E1)[&rate=9.951857149870663E-4]:9.760147056893E-1,(19[&rate=4.571856033097431E-4]:2.061925981037E1,18[&rate=3.1185090053537795E-4]:2.061925981037E1)[&rate=3.974315495277633E-4]:5.442889691513E1)[&rate=4.993731107900506E-4]:1.321027580466E0,((10[&rate=5.596400446877393E-4]:2.835243059665E1,31[&rate=4.227862802895817E-4]:2.835243059665E1)[&rate=4.680232692012413E-4]:4.506686553035E1,23[&rate=4.104284077547285E-4]:7.341929612699E1)[&rate=8.166006596151494E-4]:2.949888178968E0)[&rate=3.338116805306386E-4]:2.767813701912E0)[&rate=3.5234113298198284E-4]:2.371931254467E0,(17[&rate=7.461951935550931E-4]:6.278316597336E1,(27[&rate=4.3463622424792423E-4]:2.608148051698E1,28[&rate=0.0011730999155698592]:2.608148051698E1)[&rate=8.661735128331768E-4]:3.670168545637E1)[&rate=5.897476354089268E-4]:1.872576328899E1)[&rate=0.001831205204481909]:3.949179815675E1); +tree STATE_160000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.75580591052,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.75580591052,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.824455627927049E-4]:7.867764442474E0,9[&rate=6.402153488815005E-4]:7.867764442474E0)[&rate=7.641528637189284E-4]:6.343413699021E0,15[&rate=8.5266050372664E-4]:1.42111781415E1)[&rate=9.91902794076929E-4]:1.014793076308E2,(14[&rate=0.0013594116335973962]:3.829691063104E1,24[&rate=0.0010980522110993326]:3.829691063104E1)[&rate=6.596594717041985E-4]:7.739357514127E1)[&rate=5.32726662891603E-4]:7.008857842355E0,((((12[&rate=6.596594717041985E-4]:7.342462307595E1,((16[&rate=5.529925968305623E-4]:3.727857587853E1,((22[&rate=0.0011729994848383122]:2.909702121841E0,21[&rate=3.65325935640224E-4]:2.909702121841E0)[&rate=0.0011729994848383122]:2.386712362126E0,20[&rate=6.209518513467057E-4]:5.296414483967E0)[&rate=0.0010148559622323232]:3.198216139457E1)[&rate=8.123493762691244E-4]:3.434722366402E1,(((30[&rate=0.001067377948496144]:5.056317876345E1,26[&rate=5.921132016512052E-4]:5.056317876345E1)[&rate=7.757207443273851E-4]:7.793152220792E0,32[&rate=4.5228115926014724E-4]:5.835633098424E1)[&rate=4.384080967849413E-4]:1.095223370447E1,((((4[&rate=8.980740968515023E-4]:1.195171970497E0,3[&rate=7.875877751997311E-4]:1.195171970497E0)[&rate=4.893584365132644E-4]:2.219250265272E-1,2[&rate=7.098846457950602E-4]:1.417096997024E0)[&rate=6.402153488815005E-4]:9.025604212787E0,5[&rate=7.30971336848409E-4]:1.044270120981E1)[&rate=9.146978522877077E-4]:1.972789163122E0,((6[&rate=9.146978522877077E-4]:6.010296827269E0,7[&rate=5.116444218613898E-4]:6.010296827269E0)[&rate=0.0010148559622323232]:8.169978839836E-1,1[&rate=4.7759183618057224E-4]:6.827294711253E0)[&rate=6.305688617858878E-4]:5.588195661681E0)[&rate=6.017411738826939E-4]:5.689307431578E1)[&rate=0.0012208749425730817]:2.317234853843E0)[&rate=7.098846457950602E-4]:1.798823533401E0)[&rate=5.72718056266018E-4]:2.15950139451E0,25[&rate=7.528555993915447E-4]:7.558412447046E1)[&rate=0.0010148559622323232]:1.28591538744E0,((((33[&rate=7.203386706081952E-4]:6.280888601594E1,13[&rate=2.8605343579427814E-4]:6.280888601594E1)[&rate=9.508334541075798E-4]:8.53618633938E0,(11[&rate=8.980740968515023E-4]:1.613025068891E1,29[&rate=6.113481975514503E-4]:1.613025068891E1)[&rate=7.875877751997311E-4]:5.521482166641E1)[&rate=4.5228115926014724E-4]:1.063108370191E0,(19[&rate=3.8788470856292623E-4]:2.171993321008E1,18[&rate=6.499070415665478E-4]:2.171993321008E1)[&rate=4.067806698673774E-4]:5.068824751543E1)[&rate=4.067806698673774E-4]:1.752469949262E0,((10[&rate=5.116444218613898E-4]:3.092008089614E1,31[&rate=8.5266050372664E-4]:3.092008089614E1)[&rate=5.22308428272849E-4]:4.302707914022E1,23[&rate=5.529925968305623E-4]:7.394716003636E1)[&rate=6.499070415665478E-4]:2.134906384118E-1)[&rate=9.91902794076929E-4]:2.709389183132E0)[&rate=4.6527879619762277E-4]:4.158893385395E0,(17[&rate=8.387388181503878E-4]:6.946758925694E1,(27[&rate=6.113481975514503E-4]:3.224376474698E1,28[&rate=7.875877751997311E-4]:3.224376474698E1)[&rate=8.822539686963805E-4]:3.722382450996E1)[&rate=6.596594717041985E-4]:1.156134398636E1)[&rate=0.0014788243651665447]:4.167041037137E1); +tree STATE_170000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.15054391887,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.15054391887,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.169785003770666E-4]:6.275023473099E0,9[&rate=0.0011767149150951266]:6.275023473099E0)[&rate=2.5877370397720906E-4]:7.439866477267E0,15[&rate=8.036054259999365E-4]:1.371488995037E1)[&rate=5.116712643444549E-4]:1.005036330374E2,(14[&rate=0.0015157498640260567]:4.354625269009E1,24[&rate=7.843709375658145E-4]:4.354625269009E1)[&rate=8.94388397658379E-4]:7.067227029765E1)[&rate=6.464058805509248E-4]:1.471212862019E1,((((12[&rate=6.730243735425846E-4]:7.61462570504E1,((16[&rate=3.934940920067881E-4]:3.932847714767E1,((22[&rate=6.213585770766644E-4]:2.731295540807E0,21[&rate=3.169785003770666E-4]:2.731295540807E0)[&rate=6.594995872758855E-4]:3.418579859969E0,20[&rate=7.843709375658145E-4]:6.149875400776E0)[&rate=0.0010659059883086491]:3.317860174689E1)[&rate=8.94388397658379E-4]:3.494309149865E1,(((30[&rate=7.488861719714275E-4]:5.063368209812E1,26[&rate=4.8177765386468724E-4]:5.063368209812E1)[&rate=0.0011767149150951266]:1.113979238743E1,32[&rate=3.169785003770666E-4]:6.177347448555E1)[&rate=3.169785003770666E-4]:8.883312985776E0,((((3[&rate=9.853593865137582E-4]:1.326594782768E0,4[&rate=4.3297381606809593E-4]:1.326594782768E0)[&rate=5.116712643444549E-4]:4.391132884078E-1,2[&rate=8.691650131226814E-4]:1.765708071175E0)[&rate=4.3297381606809593E-4]:9.844306320623E0,5[&rate=2.5877370397720906E-4]:1.16100143918E1)[&rate=7.843709375658145E-4]:9.663953980673E-1,((6[&rate=4.719601253340357E-4]:7.002733705068E0,7[&rate=5.218373345783734E-4]:7.002733705068E0)[&rate=9.519435728172452E-4]:1.384630267534E0,1[&rate=2.7555366174047735E-4]:8.387363972601E0)[&rate=4.133861775722541E-4]:4.189045817265E0)[&rate=6.337039546172656E-4]:5.808037768146E1)[&rate=7.488861719714275E-4]:3.614781174997E0)[&rate=5.016168841204603E-4]:1.874688404081E0)[&rate=4.427138239185881E-4]:1.426946593472E0,25[&rate=4.916577810433959E-4]:7.757320364387E1)[&rate=2.905053370477468E-4]:1.152286625248E0,((((33[&rate=5.749480033897214E-4]:6.55344732844E1,13[&rate=4.133861775722541E-4]:6.55344732844E1)[&rate=3.625361247172029E-4]:6.792717937424E0,(11[&rate=5.116712643444549E-4]:1.444295254262E1,29[&rate=6.093379574449178E-4]:1.444295254262E1)[&rate=7.324101624139124E-4]:5.78842386792E1)[&rate=6.870243613263019E-4]:6.06250575531E-1,(19[&rate=9.218268998639527E-4]:1.728703357634E1,18[&rate=6.594995872758855E-4]:1.728703357634E1)[&rate=3.290658292973697E-4]:5.564640822101E1)[&rate=9.218268998639527E-4]:1.679621406917E0,((10[&rate=3.625361247172029E-4]:3.302457375281E1,31[&rate=5.116712643444549E-4]:3.302457375281E1)[&rate=5.861580001509899E-4]:4.084757845182E1,23[&rate=3.8336158843056304E-4]:7.387215220464E1)[&rate=4.621885405822849E-4]:7.409109996344E-1)[&rate=1.7307246631544288E-4]:4.112427064853E0)[&rate=4.719601253340357E-4]:5.609412649868E0,(17[&rate=7.324101624139124E-4]:6.777779553028E1,(27[&rate=3.730570130914026E-4]:3.175029513463E1,28[&rate=9.853593865137582E-4]:3.175029513463E1)[&rate=5.749480033897214E-4]:3.602750039565E1)[&rate=4.719601253340357E-4]:1.655710738871E1)[&rate=0.001356216910607438]:4.459574868894E1); +tree STATE_180000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.35037548495,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.35037548495,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.069668153637177E-4]:6.714985372764E0,9[&rate=6.859657531826749E-4]:6.714985372764E0)[&rate=9.892101202977563E-4]:5.43614102641E0,15[&rate=8.255446388651048E-4]:1.215112639917E1)[&rate=7.651252470654687E-4]:9.869532561275E1,(14[&rate=0.0012930216045079974]:4.022137938717E1,24[&rate=8.85328111926983E-4]:4.022137938717E1)[&rate=9.643145889227475E-4]:7.062507262475E1)[&rate=7.236317317086348E-4]:1.857999633904E1,((((12[&rate=7.878913541582153E-4]:7.356186371882E1,((16[&rate=4.6774649464420873E-4]:4.105513177496E1,((22[&rate=6.254551237569587E-4]:2.10035813615E0,21[&rate=4.8804291954564243E-4]:2.10035813615E0)[&rate=6.171302042753336E-4]:3.856226763855E0,20[&rate=5.160550987388552E-4]:5.956584900005E0)[&rate=9.027471316429299E-4]:3.509854687495E1)[&rate=9.027471316429299E-4]:3.069175471799E1,(((((3[&rate=7.236317317086348E-4]:1.716942478732E0,4[&rate=0.0010497490039937745]:1.716942478732E0)[&rate=6.171302042753336E-4]:3.438959384494E-1,2[&rate=5.840904641127273E-4]:2.060838417181E0)[&rate=7.04414000307513E-4]:9.278667711341E0,5[&rate=3.879042923348495E-4]:1.133950612852E1)[&rate=0.0010173269936536503]:1.338647691351E0,((6[&rate=5.840904641127273E-4]:6.695519430183E0,7[&rate=4.196997035122528E-4]:6.695519430183E0)[&rate=6.171302042753336E-4]:4.573586795316E-1,1[&rate=3.879042923348495E-4]:7.152878109715E0)[&rate=0.0011986986719152595]:5.525275710157E0)[&rate=6.951035874047276E-4]:5.715173923581E1,((30[&rate=5.591879431259729E-4]:4.496536325407E1,26[&rate=4.8804291954564243E-4]:4.496536325407E1)[&rate=7.335832558379404E-4]:1.496066468528E1,32[&rate=4.4538499626940096E-4]:5.992602793935E1)[&rate=5.840904641127273E-4]:9.903865116335E0)[&rate=5.675310954847338E-4]:1.916993437267E0)[&rate=0.00108821617468898]:1.814977225869E0)[&rate=5.069668153637177E-4]:2.743098428717E0,25[&rate=7.139163545816414E-4]:7.630496214754E1)[&rate=8.255446388651048E-4]:5.56409749056E-1,((((33[&rate=5.507790842033913E-4]:6.14531445136E1,13[&rate=3.4073626009219936E-4]:6.14531445136E1)[&rate=7.437964788721898E-4]:9.175564111264E0,(11[&rate=5.336832498169262E-4]:1.46206559831E1,29[&rate=9.419190753606748E-4]:1.46206559831E1)[&rate=8.392794803652022E-4]:5.600805264177E1)[&rate=6.254551237569587E-4]:8.293993035146E-1,(19[&rate=5.923385741305409E-4]:1.961805925358E1,18[&rate=9.419190753606748E-4]:1.961805925358E1)[&rate=4.4538499626940096E-4]:5.18400486748E1)[&rate=4.4538499626940096E-4]:2.523225861331E0,((10[&rate=5.923385741305409E-4]:3.274144328184E1,31[&rate=5.336832498169262E-4]:3.274144328184E1)[&rate=6.171302042753336E-4]:4.062264194469E1,23[&rate=5.758264381266342E-4]:7.336408522653E1)[&rate=6.681373474811415E-4]:6.172485631846E-1)[&rate=8.12450057074194E-4]:2.880038106882E0)[&rate=8.255446388651048E-4]:4.318072139196E0,(17[&rate=7.878913541582153E-4]:7.096252656472E1,(27[&rate=4.5688341833617673E-4]:3.115468827752E1,28[&rate=8.12450057074194E-4]:3.115468827752E1)[&rate=6.681373474811415E-4]:3.980783828721E1)[&rate=4.0486380921914773E-4]:1.021691747106E1)[&rate=9.215189467659218E-4]:4.824700431518E1); +tree STATE_190000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55149.561119774386,EEF_ucld_branchRates=-266.168517335019,lnP=-55149.561119774386,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.572993396765939E-4]:5.505005752993E0,9[&rate=0.001314431524248791]:5.505005752993E0)[&rate=8.980387222118892E-4]:7.12719348326E0,15[&rate=4.920816587460045E-4]:1.263219923625E1)[&rate=0.0010451061015016208]:9.920698926142E1,(14[&rate=0.0016672886914391829]:4.006465414993E1,24[&rate=7.488340791279559E-4]:4.006465414993E1)[&rate=0.0012507913665202933]:7.177453434775E1)[&rate=7.630718973450828E-4]:1.7468908156E1,((((12[&rate=9.889311729991438E-4]:7.087270081092E1,((16[&rate=5.681805905795045E-4]:3.521822998201E1,((22[&rate=8.784550886155315E-4]:1.892907066149E0,21[&rate=3.16932481031131E-4]:1.892907066149E0)[&rate=6.012313844654546E-4]:4.76919154269E0,20[&rate=6.012313844654546E-4]:6.662098608839E0)[&rate=0.0011524215512927632]:2.855613137317E1)[&rate=7.630718973450828E-4]:3.415307763883E1,(((((3[&rate=6.708127337021204E-4]:1.440761948291E0,4[&rate=7.630718973450828E-4]:1.440761948291E0)[&rate=3.834607080615985E-4]:3.242118256898E-1,2[&rate=0.0011524215512927632]:1.764973773981E0)[&rate=9.889311729991438E-4]:9.301298814712E0,5[&rate=4.228359048035693E-4]:1.106627258869E1)[&rate=6.708127337021204E-4]:2.467137023099E0,((6[&rate=5.030517664148638E-4]:6.413333194026E0,7[&rate=4.468545396379687E-4]:6.413333194026E0)[&rate=0.0011524215512927632]:8.008054534423E-1,1[&rate=6.956203650613935E-4]:7.214138647469E0)[&rate=6.237848293437563E-4]:6.319270964323E0)[&rate=7.777604363314366E-4]:5.492304856248E1,((30[&rate=5.681805905795045E-4]:4.913592897572E1,26[&rate=5.24801397677853E-4]:4.913592897572E1)[&rate=8.784550886155315E-4]:1.002052809247E1,32[&rate=3.834607080615985E-4]:5.915645706819E1)[&rate=6.012313844654546E-4]:9.300001106084E0)[&rate=7.084307973777946E-4]:9.148494465707E-1)[&rate=8.980387222118892E-4]:1.50139319008E0)[&rate=3.834607080615985E-4]:3.938305772888E0,25[&rate=4.1025951948710226E-4]:7.481100658381E1)[&rate=5.464553397578726E-4]:2.225018677924E0,((((19[&rate=8.086816101750834E-4]:1.524906547617E1,18[&rate=0.0010771435227063914]:1.524906547617E1)[&rate=3.5330303348156275E-4]:5.617506743027E1,(11[&rate=2.6504611127825675E-4]:1.442643517268E1,29[&rate=0.0010451061015016208]:1.442643517268E1)[&rate=6.956203650613935E-4]:5.699769773375E1)[&rate=5.139498957677555E-4]:1.149831024072E0,(33[&rate=8.784550886155315E-4]:6.311320361835E1,13[&rate=5.356294038589408E-4]:6.311320361835E1)[&rate=4.3500816976625956E-4]:9.46076031216E0)[&rate=8.420487940762542E-4]:1.060042887036E0,((10[&rate=5.681805905795045E-4]:2.918318934938E1,31[&rate=3.16932481031131E-4]:2.918318934938E1)[&rate=5.356294038589408E-4]:4.319439423882E1,23[&rate=6.124440612546814E-4]:7.23775835882E1)[&rate=4.468545396379687E-4]:1.256423229345E0)[&rate=3.5330303348156275E-4]:3.402018444195E0)[&rate=6.012313844654546E-4]:3.081922972457E0,(17[&rate=0.001314431524248791]:7.017612729156E1,(27[&rate=4.698089341054181E-4]:3.11431849238E1,28[&rate=8.980387222118892E-4]:3.11431849238E1)[&rate=8.980387222118892E-4]:3.903294236776E1)[&rate=4.468545396379687E-4]:9.941820942632E0)[&rate=0.0011126185369374519]:4.919014841949E1); +tree STATE_200000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55141.902525003155,EEF_ucld_branchRates=-266.168517335019,lnP=-55141.902525003155,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.2840456767154552E-4]:5.231732057215E0,9[&rate=0.0012881658051684666]:5.231732057215E0)[&rate=0.0011680182391395353]:6.109876481306E0,15[&rate=4.674192370856951E-4]:1.134160853852E1)[&rate=7.135597468410573E-4]:9.622712768796E1,(14[&rate=0.001816269024628164]:3.796764887483E1,24[&rate=8.443641593067688E-4]:3.796764887483E1)[&rate=0.0011680182391395353]:6.960108735165E1)[&rate=5.486271654377733E-4]:1.468085595499E1,((((((((3[&rate=8.230069777534221E-4]:1.36069620453E0,4[&rate=7.135597468410573E-4]:1.36069620453E0)[&rate=0.001039217870186094]:5.110874375789E-1,2[&rate=3.398445336772274E-4]:1.871783642108E0)[&rate=3.269329714859615E-4]:8.272751369889E0,5[&rate=2.842429772042829E-4]:1.0144535012E1)[&rate=0.0011680182391395353]:2.883234179985E0,((6[&rate=4.7873406534047226E-4]:7.091808419117E0,7[&rate=7.135597468410573E-4]:7.091808419117E0)[&rate=5.607924618288186E-4]:1.424896629274E0,1[&rate=3.5233428340514385E-4]:8.516705048392E0)[&rate=2.67871584525977E-4]:4.511064143591E0)[&rate=6.116945312883471E-4]:5.781751380749E1,(12[&rate=8.443641593067688E-4]:6.992698604769E1,(((30[&rate=7.135597468410573E-4]:4.935937908549E1,26[&rate=6.388312675269546E-4]:4.935937908549E1)[&rate=3.8807988955414426E-4]:1.51652202045E1,32[&rate=3.996139446437287E-4]:6.452459928999E1)[&rate=9.434966702719397E-4]:4.049177009224E0,(16[&rate=3.5233428340514385E-4]:3.402618859658E1,((22[&rate=6.116945312883471E-4]:2.263957669001E0,21[&rate=4.44895479007152E-4]:2.263957669001E0)[&rate=0.0010774105430855503]:4.107494257039E0,20[&rate=4.674192370856951E-4]:6.37145192604E0)[&rate=8.669133504523163E-4]:2.765473667054E1)[&rate=8.443641593067688E-4]:3.454758770264E1)[&rate=8.443641593067688E-4]:1.353209748477E0)[&rate=0.0011199607122206704]:9.182969517822E-1)[&rate=6.251000069946493E-4]:5.01668304958E0,25[&rate=5.366424540969142E-4]:7.586196604905E1)[&rate=4.110301971814132E-4]:2.285646865255E0,((((33[&rate=0.001039217870186094]:6.372872196584E1,13[&rate=3.763882647605611E-4]:6.372872196584E1)[&rate=4.901117559339325E-4]:6.602250746446E0,(11[&rate=4.44895479007152E-4]:1.49272575072E1,29[&rate=5.366424540969142E-4]:1.49272575072E1)[&rate=7.648339863457021E-4]:5.540371520508E1)[&rate=3.763882647605611E-4]:2.109368911896E0,(19[&rate=7.300088986675004E-4]:1.52963809467E1,18[&rate=3.644920268052331E-4]:1.52963809467E1)[&rate=5.486271654377733E-4]:5.714396067748E1)[&rate=4.561468431938617E-4]:2.645634066441E0,((10[&rate=4.7873406534047226E-4]:3.002147563426E1,31[&rate=5.015720825625301E-4]:3.002147563426E1)[&rate=5.248181099242461E-4]:4.205603612193E1,23[&rate=2.67871584525977E-4]:7.20775117562E1)[&rate=9.728041968225667E-4]:3.008463934423E0)[&rate=6.529190538684609E-4]:3.06163722369E0)[&rate=2.842429772042829E-4]:3.26555905028E0,(17[&rate=8.669133504523163E-4]:7.161740667615E1,(27[&rate=3.134814777066983E-4]:3.708351707226E1,28[&rate=8.443641593067688E-4]:3.708351707226E1)[&rate=0.0012881658051684666]:3.453388960388E1)[&rate=5.131344434923628E-4]:9.795765288441E0)[&rate=0.0013668940818854544]:4.083642021688E1); +tree STATE_210000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55166.88427655368,EEF_ucld_branchRates=-266.168517335019,lnP=-55166.88427655368,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=9.403497652015867E-4]:7.125514085453E0,9[&rate=5.754638257771231E-4]:7.125514085453E0)[&rate=0.0010061467203073883]:5.982133120292E0,15[&rate=4.814710385174394E-4]:1.310764720574E1)[&rate=8.215831553054026E-4]:1.035514314486E2,(14[&rate=0.0012990979517981853]:4.028340002002E1,24[&rate=9.819726378598413E-4]:4.028340002002E1)[&rate=0.0011020144350151356]:7.63756786343E1)[&rate=7.768173482792226E-4]:1.032990645166E1,((((12[&rate=7.984290069522296E-4]:7.45863922452E1,((16[&rate=8.466757429949792E-4]:3.47171588937E1,((22[&rate=8.338574553602891E-4]:2.984439773605E0,21[&rate=4.814710385174394E-4]:2.984439773605E0)[&rate=6.414324736315858E-4]:1.803339242202E0,20[&rate=9.050815687247342E-4]:4.787779015808E0)[&rate=0.0011020144350151356]:2.992937987789E1)[&rate=0.0010648162507261559]:3.499245088457E1,(((30[&rate=8.215831553054026E-4]:4.686331256613E1,26[&rate=6.414324736315858E-4]:4.686331256613E1)[&rate=5.921520656555687E-4]:1.494706838632E1,32[&rate=5.027824786500935E-4]:6.181038095245E1)[&rate=5.754638257771231E-4]:7.554808991523E0,((((3[&rate=8.891967060939167E-4]:1.209243337791E0,4[&rate=5.223743384944336E-4]:1.209243337791E0)[&rate=5.407969266303956E-4]:4.525943889211E-1,2[&rate=7.564482285521532E-4]:1.661837726712E0)[&rate=4.290246758333921E-4]:9.833115123487E0,5[&rate=4.440121809031983E-4]:1.14949528502E1)[&rate=9.602016652433069E-4]:1.165753102795E0,((6[&rate=9.403497652015867E-4]:7.316210796953E0,7[&rate=5.496866287463571E-4]:7.316210796953E0)[&rate=8.466757429949792E-4]:4.767948424814E-1,1[&rate=4.57503768235136E-4]:7.793005639434E0)[&rate=5.317061821146142E-4]:4.86770031356E0)[&rate=6.004074244458451E-4]:5.670448399098E1)[&rate=7.006598315556478E-4]:3.444198343011E-1)[&rate=7.466542732107405E-4]:4.876782466927E0)[&rate=8.466757429949792E-4]:1.859200329539E0,25[&rate=8.466757429949792E-4]:7.644559257474E1)[&rate=5.223743384944336E-4]:1.395076686239E0,((((33[&rate=6.168238155879418E-4]:6.055358402633E1,13[&rate=4.440121809031983E-4]:6.055358402633E1)[&rate=6.250148627501092E-4]:9.929334227146E0,(11[&rate=5.317061821146142E-4]:1.362042426684E1,29[&rate=6.332132590804092E-4]:1.362042426684E1)[&rate=7.66493403461463E-4]:5.686249398663E1)[&rate=6.414324736315858E-4]:1.394035564814E0,(19[&rate=7.095279386533697E-4]:1.693586895801E1,18[&rate=6.579859734400804E-4]:1.693586895801E1)[&rate=5.921520656555687E-4]:5.494108486028E1)[&rate=5.027824786500935E-4]:1.896523072414E0,((10[&rate=7.18543259021527E-4]:2.461810037728E1,31[&rate=7.095279386533697E-4]:2.461810037728E1)[&rate=6.168238155879418E-4]:4.796396761081E1,23[&rate=5.838435412831376E-4]:7.258206798809E1)[&rate=0.0010334152821733571]:1.191408902612E0)[&rate=6.919226255244917E-4]:4.067192370279E0)[&rate=6.496856920736671E-4]:3.857010621322E0,(17[&rate=8.338574553602891E-4]:7.359405686776E1,(27[&rate=3.639382119659714E-4]:3.62244452802E1,28[&rate=7.564482285521532E-4]:3.62244452802E1)[&rate=4.290246758333921E-4]:3.736961158756E1)[&rate=6.004074244458451E-4]:8.103623014542E0)[&rate=0.0010061467203073883]:4.529130522368E1); +tree STATE_220000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55184.3263401491,EEF_ucld_branchRates=-266.168517335019,lnP=-55184.3263401491,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.322120967433617E-4]:8.907592453281E0,9[&rate=5.314265329044074E-4]:8.907592453281E0)[&rate=5.970665925817025E-4]:4.33579993532E0,15[&rate=9.428673317003838E-4]:1.32433923886E1)[&rate=6.25145857237087E-4]:9.545812443774E1,(14[&rate=9.0119060163014E-4]:3.935559155928E1,24[&rate=9.980767070189194E-4]:3.935559155928E1)[&rate=6.322120967433617E-4]:6.934592526706E1)[&rate=9.980767070189194E-4]:1.992070150292E1,(((((16[&rate=4.4629202265586903E-4]:4.05410848016E1,((22[&rate=6.758679055374136E-4]:2.751115973015E0,21[&rate=5.900356125724115E-4]:2.751115973015E0)[&rate=6.181094171239115E-4]:2.237340472837E0,20[&rate=5.541562575400319E-4]:4.988456445851E0)[&rate=9.980767070189194E-4]:3.555262835575E1)[&rate=0.0011545933210430717]:2.953159026831E1,((((30[&rate=7.236970642734767E-4]:5.186190941227E1,26[&rate=7.797355607699364E-4]:5.186190941227E1)[&rate=7.597772919118968E-4]:4.816319124715E0,32[&rate=5.23509484152536E-4]:5.667822853698E1)[&rate=7.411894208790886E-4]:1.086920743395E1,((((2[&rate=5.614801437046695E-4]:1.154173031693E0,4[&rate=6.110916474868733E-4]:1.154173031693E0)[&rate=8.253820671971734E-4]:3.859866548698E-1,3[&rate=5.758729774769359E-4]:1.540159686563E0)[&rate=5.970665925817025E-4]:8.160097809919E0,5[&rate=5.758729774769359E-4]:9.700257496482E0)[&rate=8.672863660335736E-4]:2.289458457307E0,((6[&rate=7.152934214307366E-4]:7.79897262217E0,7[&rate=4.3292798758698544E-4]:7.79897262217E0)[&rate=8.014324952179148E-4]:1.205316166171E0,1[&rate=6.609985213212971E-4]:9.004288788341E0)[&rate=6.834657901247808E-4]:2.985427165449E0)[&rate=5.153663085145727E-4]:5.555772001714E1)[&rate=7.903388112284038E-4]:1.351818509938E0,12[&rate=8.834778850922144E-4]:6.889925448087E1)[&rate=6.040812445371928E-4]:1.173420589043E0)[&rate=6.758679055374136E-4]:4.965437594446E0,25[&rate=8.253820671971734E-4]:7.503811266436E1)[&rate=4.794716450055517E-4]:1.937946451279E0,((((33[&rate=9.20805847449019E-4]:6.10125463478E1,13[&rate=4.175574113118777E-4]:6.10125463478E1)[&rate=7.411894208790886E-4]:6.790587172369E0,(11[&rate=4.982153036756249E-4]:1.689185061018E1,29[&rate=5.153663085145727E-4]:1.689185061018E1)[&rate=5.687131542715961E-4]:5.091128290999E1)[&rate=4.582779842927611E-4]:1.41022904087E0,(19[&rate=6.758679055374136E-4]:1.362528272662E1,18[&rate=5.23509484152536E-4]:1.362528272662E1)[&rate=4.982153036756249E-4]:5.558807983442E1)[&rate=4.3292798758698544E-4]:3.962804657411E0,((10[&rate=7.695647745905365E-4]:2.180443190196E1,31[&rate=3.7424029080368026E-4]:2.180443190196E1)[&rate=5.758729774769359E-4]:5.026993545673E1,23[&rate=4.890845006064249E-4]:7.207436735869E1)[&rate=7.236970642734767E-4]:1.101799859764E0)[&rate=7.797355607699364E-4]:3.799891897188E0)[&rate=6.322120967433617E-4]:3.719576331211E0,(17[&rate=7.152934214307366E-4]:7.440394799407E1,(27[&rate=5.687131542715961E-4]:3.740539978764E1,28[&rate=7.903388112284038E-4]:3.740539978764E1)[&rate=9.20805847449019E-4]:3.699854820643E1)[&rate=7.695647745905365E-4]:6.291687452778E0)[&rate=9.0119060163014E-4]:4.792658288241E1); +tree STATE_230000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55159.65897810424,EEF_ucld_branchRates=-266.168517335019,lnP=-55159.65897810424,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.4415665164271113E-4]:7.495887433726E0,9[&rate=0.0017004775020116763]:7.495887433726E0)[&rate=5.810968396477971E-4]:8.364030506142E0,15[&rate=5.622996294895772E-4]:1.585991793987E1)[&rate=0.0010073537500336943]:1.008155478001E2,(14[&rate=0.0010385461766174132]:4.545659007867E1,24[&rate=0.0011150361919547672]:4.545659007867E1)[&rate=5.905703541717978E-4]:7.121887566134E1)[&rate=8.894799569454798E-4]:1.205875201791E1,(((((((30[&rate=6.194737195584533E-4]:5.091139237509E1,26[&rate=5.716783749604874E-4]:5.091139237509E1)[&rate=3.388575293862025E-4]:7.592061521457E0,32[&rate=5.34242539173178E-4]:5.850345389655E1)[&rate=6.29320884253701E-4]:1.023404735806E1,((((3[&rate=3.566574322405098E-4]:1.651465195803E0,4[&rate=0.0011640943256860448]:1.651465195803E0)[&rate=4.460023260884287E-4]:5.241489926537E-1,2[&rate=9.541042574967742E-4]:2.175614188457E0)[&rate=7.910355386714364E-4]:6.821589621179E0,5[&rate=4.963495049110836E-4]:8.997203809636E0)[&rate=8.707714504127132E-4]:3.045895060817E0,((6[&rate=0.0011640943256860448]:9.207176693714E0,7[&rate=4.121520300798456E-4]:9.207176693714E0)[&rate=4.351546383140798E-4]:4.637091302172E-1,1[&rate=4.667703750298006E-4]:9.670885823931E0)[&rate=6.809140986572084E-4]:2.372213046522E0)[&rate=6.702187356404163E-4]:5.669440238415E1)[&rate=7.637679219768041E-4]:3.182435403733E0,(12[&rate=7.383659375017039E-4]:6.996746162897E1,(16[&rate=6.597316305135645E-4]:3.045238356667E1,((22[&rate=4.667703750298006E-4]:3.364100221238E0,21[&rate=6.097434227073442E-4]:3.364100221238E0)[&rate=7.383659375017039E-4]:2.440003907265E0,20[&rate=7.910355386714364E-4]:5.804104128503E0)[&rate=0.0010385461766174132]:2.464827943817E1)[&rate=8.055057873226054E-4]:3.95150780623E1)[&rate=5.154312974770118E-4]:1.952475029371E0)[&rate=7.26252577095694E-4]:2.645546596831E0,25[&rate=8.206240987392198E-4]:7.456548325517E1)[&rate=7.910355386714364E-4]:1.5935340021E0,((((33[&rate=7.26252577095694E-4]:5.591680104062E1,13[&rate=5.34242539173178E-4]:5.591680104062E1)[&rate=8.531496834027194E-4]:1.207201684975E1,(11[&rate=5.622996294895772E-4]:2.150695186496E1,29[&rate=5.154312974770118E-4]:2.150695186496E1)[&rate=5.248599750426414E-4]:4.648186602542E1)[&rate=5.34242539173178E-4]:8.912225032204E-1,(19[&rate=5.716783749604874E-4]:1.478874649739E1,18[&rate=0.0010073537500336943]:1.478874649739E1)[&rate=4.460023260884287E-4]:5.409129389621E1)[&rate=6.809140986572084E-4]:3.801548230852E0,((10[&rate=4.351546383140798E-4]:2.400104327583E1,31[&rate=6.097434227073442E-4]:2.400104327583E1)[&rate=3.865904946192235E-4]:4.757592368352E1,23[&rate=3.865904946192235E-4]:7.157696695935E1)[&rate=8.36472866351118E-4]:1.104621665101E0)[&rate=3.865904946192235E-4]:3.477428632821E0)[&rate=8.36472866351118E-4]:5.610181731073E0,(17[&rate=7.637679219768041E-4]:7.496717322725E1,(27[&rate=4.667703750298006E-4]:3.426246299305E1,28[&rate=6.097434227073442E-4]:3.426246299305E1)[&rate=5.059355357986756E-4]:4.07047102342E1)[&rate=9.794283796826103E-4]:6.80202576109E0)[&rate=0.0010739604280593379]:4.696501876958E1); +tree STATE_240000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55126.51021728988,EEF_ucld_branchRates=-266.168517335019,lnP=-55126.51021728988,RHOD_ucld_branchRates=-266.168517335019] = [&R] 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+tree STATE_250000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55132.247700953696,EEF_ucld_branchRates=-266.168517335019,lnP=-55132.247700953696,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.054262875524697E-4]:7.498435340527E0,9[&rate=5.112179090560738E-4]:7.498435340527E0)[&rate=6.631938967808402E-4]:6.445725938152E0,15[&rate=4.068315730321986E-4]:1.394416127868E1)[&rate=7.870812859641207E-4]:1.050935679464E2,(14[&rate=0.0011304003137496937]:4.533636500178E1,24[&rate=6.90892597510654E-4]:4.533636500178E1)[&rate=9.739896053362237E-4]:7.370136422325E1)[&rate=0.0011304003137496937]:1.061469981934E1,((((12[&rate=7.693283679834196E-4]:7.181420785649E1,((16[&rate=5.325692392468351E-4]:3.27986304511E1,((22[&rate=0.0011304003137496937]:3.16077433008E0,21[&rate=2.8231671158847804E-4]:3.16077433008E0)[&rate=5.006854370385869E-4]:3.409667097356E0,20[&rate=8.461116948340604E-4]:6.570441427436E0)[&rate=0.0014471392806453807]:2.622818902367E1)[&rate=7.054262875524697E-4]:3.78365857323E1,(((30[&rate=7.361034647427703E-4]:4.829589070389E1,26[&rate=6.37056684258999E-4]:4.829589070389E1)[&rate=3.2592025622861905E-4]:8.351241593826E0,32[&rate=4.1743503988676714E-4]:5.664713229772E1)[&rate=3.626287869466448E-4]:1.126379556618E1,((((2[&rate=0.0010066354268866388]:1.708111556695E0,4[&rate=2.980366973779141E-4]:1.708111556695E0)[&rate=7.361034647427703E-4]:6.796624828377E-1,3[&rate=5.544195325295764E-4]:2.387774039533E0)[&rate=8.05717539967545E-4]:8.167379437726E0,5[&rate=3.9609202417158424E-4]:1.055515347726E1)[&rate=5.655770046418935E-4]:1.62436114994E0,((7[&rate=4.694497434513823E-4]:9.435730644281E0,6[&rate=3.508685067582974E-4]:9.435730644281E0)[&rate=3.740418280138357E-4]:3.251765038449E-1,1[&rate=5.434230972300329E-4]:9.760907148126E0)[&rate=0.0011304003137496937]:2.418607479073E0)[&rate=4.4874230321595616E-4]:5.57314132367E1)[&rate=6.122164449451049E-4]:2.724288319507E0)[&rate=0.0012510653977741025]:1.178991673086E0)[&rate=8.917035626264312E-4]:1.649659453698E0,25[&rate=6.37056684258999E-4]:7.346386731019E1)[&rate=1.7522959596512588E-4]:1.0142118929E0,((((11[&rate=2.980366973779141E-4]:2.083849871642E1,29[&rate=7.870812859641207E-4]:2.083849871642E1)[&rate=0.0010836904498318872]:4.60133516565E1,(33[&rate=7.361034647427703E-4]:5.552804241754E1,13[&rate=3.386716339186931E-4]:5.552804241754E1)[&rate=5.544195325295764E-4]:1.132380795538E1)[&rate=5.544195325295764E-4]:4.066793569521E0,(19[&rate=7.870812859641207E-4]:1.48947353154E1,18[&rate=4.1743503988676714E-4]:1.48947353154E1)[&rate=5.006854370385869E-4]:5.602390862704E1)[&rate=4.694497434513823E-4]:1.56932824263E0,((10[&rate=4.2793576826849564E-4]:2.874940660421E1,31[&rate=5.21840035525396E-4]:2.874940660421E1)[&rate=4.694497434513823E-4]:4.208481760454E1,23[&rate=4.3836288967464106E-4]:7.083422420874E1)[&rate=3.626287869466448E-4]:1.653747976327E0)[&rate=5.434230972300329E-4]:1.990107018016E0)[&rate=0.0011304003137496937]:3.301863812349E0,(17[&rate=8.461116948340604E-4]:6.771313561975E1,(27[&rate=4.694497434513823E-4]:2.675452358559E1,28[&rate=8.681643522631967E-4]:2.675452358559E1)[&rate=6.90892597510654E-4]:4.095861203416E1)[&rate=2.4406542881221543E-4]:1.006680739569E1)[&rate=0.001185077784679174]:5.187248602893E1); +tree STATE_260000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55128.95985748921,EEF_ucld_branchRates=-266.168517335019,lnP=-55128.95985748921,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.623996731855348E-4]:7.930435388755E0,9[&rate=7.823807634262227E-4]:7.930435388755E0)[&rate=6.075512393453337E-4]:6.87860971885E0,15[&rate=4.99180114971304E-4]:1.48090451076E1)[&rate=5.087546917273912E-4]:1.127105678604E2,(14[&rate=0.001170659974518494]:5.161257818281E1,24[&rate=0.0010718341986342241]:5.161257818281E1)[&rate=0.0010332151021302336]:7.590703478525E1)[&rate=7.823807634262227E-4]:1.318019706863E0,((((12[&rate=7.823807634262227E-4]:7.322723509479E1,((16[&rate=3.6345257283695626E-4]:3.069201448922E1,((22[&rate=4.306139997908641E-4]:3.308839476079E0,21[&rate=7.522829453749765E-4]:3.308839476079E0)[&rate=8.331632730438785E-4]:3.422519400357E0,20[&rate=0.0010332151021302336]:6.731358876436E0)[&rate=0.001116777723546346]:2.396065561279E1)[&rate=8.331632730438785E-4]:4.21905596248E1,(((30[&rate=6.623996731855348E-4]:4.928675709438E1,26[&rate=7.113017791132549E-4]:4.928675709438E1)[&rate=7.823807634262227E-4]:9.141438591361E0,32[&rate=4.703082074370173E-4]:5.842819568574E1)[&rate=3.2078032506209974E-4]:1.287642598667E1,((((2[&rate=7.244817027080791E-4]:1.703712382241E0,4[&rate=6.985410132915509E-4]:1.703712382241E0)[&rate=8.520146343313285E-4]:9.730164617917E-1,3[&rate=4.605649682873486E-4]:2.676728844033E0)[&rate=0.0010332151021302336]:9.768057598426E0,5[&rate=5.8696042329355E-4]:1.244478644246E1)[&rate=3.987986818721761E-4]:1.824571886374E0,((7[&rate=2.559488578322969E-4]:9.451200613723E0,6[&rate=5.570562943954099E-4]:9.451200613723E0)[&rate=4.5072160441169003E-4]:8.76827876103E-1,1[&rate=5.768781992753943E-4]:1.032802848983E1)[&rate=9.690258633909966E-4]:3.941329839007E0)[&rate=5.375843078901635E-4]:5.703526334358E1)[&rate=3.033019071807867E-4]:1.577952441607E0)[&rate=0.001116777723546346]:3.446609807678E-1)[&rate=5.8696042329355E-4]:2.012022761784E0,25[&rate=6.861599637669243E-4]:7.523925785657E1)[&rate=7.381252561783771E-4]:1.387272400682E0,((((11[&rate=5.472844627973523E-4]:2.04985324703E1,29[&rate=3.987986818721761E-4]:2.04985324703E1)[&rate=7.381252561783771E-4]:4.662281028524E1,(33[&rate=6.861599637669243E-4]:6.043624243283E1,13[&rate=4.0969104105761776E-4]:6.043624243283E1)[&rate=4.306139997908641E-4]:6.685100322707E0)[&rate=4.407491045713649E-4]:2.063112296493E0,(19[&rate=5.279400364095534E-4]:1.551529207325E1,18[&rate=5.375843078901635E-4]:1.551529207325E1)[&rate=3.2078032506209974E-4]:5.366916297878E1)[&rate=4.99180114971304E-4]:4.350101409979E0,((10[&rate=5.669155682962563E-4]:2.814048490328E1,31[&rate=7.670125618544826E-4]:2.814048490328E1)[&rate=5.768781992753943E-4]:4.473814803332E1,23[&rate=5.279400364095534E-4]:7.28786329366E1)[&rate=3.362573225142306E-4]:6.559235254115E-1)[&rate=4.99180114971304E-4]:3.091973795248E0)[&rate=4.0969104105761776E-4]:2.841346394954E0,(17[&rate=9.166045862116356E-4]:6.947835644303E1,(27[&rate=3.8752803340988824E-4]:2.71327907126E1,28[&rate=0.0010718341986342241]:2.71327907126E1)[&rate=9.690258633909966E-4]:4.234556573044E1)[&rate=4.99180114971304E-4]:9.989520209176E0)[&rate=0.0013286627780883958]:4.936975602271E1); +tree STATE_270000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55133.383846295386,EEF_ucld_branchRates=-266.168517335019,lnP=-55133.383846295386,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.920922211552181E-4]:8.175948751862E0,9[&rate=7.195452228813573E-4]:8.175948751862E0)[&rate=8.41634491297603E-4]:6.665062601845E0,15[&rate=6.222276720631426E-4]:1.484101135371E1)[&rate=5.971260822325347E-4]:1.054205605133E2,(14[&rate=0.0011731673772479557]:5.210641856086E1,24[&rate=7.677955335044366E-4]:5.210641856086E1)[&rate=8.219283680549296E-4]:6.815515330615E1)[&rate=7.350781669307569E-4]:8.043943744899E0,((((12[&rate=7.850953749215767E-4]:7.569056808921E1,((16[&rate=3.886656730243359E-4]:3.067805567357E1,((22[&rate=0.0012257250989493468]:3.225455520884E0,21[&rate=9.07280724868349E-4]:3.225455520884E0)[&rate=6.898891276848637E-4]:3.311155052434E0,20[&rate=5.376375472268411E-4]:6.536610573318E0)[&rate=0.001361876833514723]:2.414144510025E1)[&rate=7.850953749215767E-4]:4.396422609191E1,(((30[&rate=0.0010168266716569774]:5.112220656487E1,26[&rate=8.41634491297603E-4]:5.112220656487E1)[&rate=0.0010866578413420219]:5.162716716594E0,32[&rate=5.261386040665878E-4]:5.628492328147E1)[&rate=4.920922211552181E-4]:1.552134996101E1,((((2[&rate=2.901918976539974E-4]:2.117788129137E0,4[&rate=3.505683849691803E-4]:2.117788129137E0)[&rate=3.7635683255063645E-4]:7.084004388486E-1,3[&rate=4.355935399663658E-4]:2.826188567986E0)[&rate=3.7635683255063645E-4]:1.003452267058E1,5[&rate=4.241082033708682E-4]:1.286071123856E1)[&rate=0.001361876833514723]:1.780658958662E0,((7[&rate=3.0699060914042624E-4]:7.237958094195E0,6[&rate=6.898891276848637E-4]:7.237958094195E0)[&rate=5.033854934225433E-4]:1.615600891718E0,1[&rate=2.901918976539974E-4]:8.853558985913E0)[&rate=5.033854934225433E-4]:5.787811211313E0)[&rate=5.728538207507187E-4]:5.716490304525E1)[&rate=4.1248721961675014E-4]:2.836008523003E0)[&rate=0.0012873541109131332]:1.048286323727E0)[&rate=0.0011731673772479557]:5.947263693037E-1,25[&rate=5.609759313818002E-4]:7.628529445851E1)[&rate=9.07280724868349E-4]:1.070074699178E0,((((11[&rate=7.677955335044366E-4]:2.011807834325E1,29[&rate=9.318509275404434E-4]:2.011807834325E1)[&rate=5.971260822325347E-4]:4.909071411479E1,(33[&rate=8.031129241606054E-4]:5.922774269634E1,13[&rate=3.3687062081093447E-4]:5.922774269634E1)[&rate=4.5829466669501683E-4]:9.9810497617E0)[&rate=0.0012257250989493468]:3.159695568776E-1,(19[&rate=8.219283680549296E-4]:1.489894856832E1,18[&rate=4.4697867808133024E-4]:1.489894856832E1)[&rate=2.7140967905130294E-4]:5.46258134466E1)[&rate=0.0010866578413420219]:5.23462757835E0,((10[&rate=4.1248721961675014E-4]:2.317088903481E1,31[&rate=7.350781669307569E-4]:2.317088903481E1)[&rate=4.920922211552181E-4]:4.980267158392E1,23[&rate=5.376375472268411E-4]:7.297356061873E1)[&rate=5.848970635110142E-4]:1.785828974536E0)[&rate=5.261386040665878E-4]:2.595979564424E0)[&rate=3.886656730243359E-4]:3.275697548391E0,(17[&rate=8.41634491297603E-4]:7.145000952631E1,(27[&rate=5.609759313818002E-4]:2.811760020104E1,28[&rate=0.0011731673772479557]:2.811760020104E1)[&rate=5.492436196102969E-4]:4.333240932528E1)[&rate=2.494703367518972E-4]:9.181057179766E0)[&rate=0.0015841788159435314]:4.767444890583E1); +tree STATE_280000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55149.7507245411,EEF_ucld_branchRates=-266.168517335019,lnP=-55149.7507245411,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.838831575220492E-4]:9.040309774432E0,9[&rate=5.94720589150884E-4]:9.040309774432E0)[&rate=9.100842008263977E-4]:5.73741736938E0,15[&rate=8.881802196169915E-4]:1.477772714381E1)[&rate=9.100842008263977E-4]:1.053320219109E2,(14[&rate=9.6324808773468E-4]:5.047173035829E1,24[&rate=5.722912008784313E-4]:5.047173035829E1)[&rate=7.5399562035947E-4]:6.963801869642E1)[&rate=5.351175349519253E-4]:8.976403588065E0,((((12[&rate=7.905847375227864E-4]:7.341712117389E1,((16[&rate=5.872052885098997E-4]:2.931212348971E1,((22[&rate=5.351175349519253E-4]:3.168280075649E0,21[&rate=5.94720589150884E-4]:3.168280075649E0)[&rate=4.010432643010177E-4]:4.468600451192E0,20[&rate=5.722912008784313E-4]:7.636880526841E0)[&rate=9.969582181986244E-4]:2.167524296287E1)[&rate=5.500314242703794E-4]:4.231726496081E1,(((30[&rate=5.045725522097837E-4]:4.827030039199E1,26[&rate=6.176424753737096E-4]:4.827030039199E1)[&rate=9.347931782956376E-4]:1.171653524859E1,32[&rate=4.632488292974169E-4]:5.998683564059E1)[&rate=4.632488292974169E-4]:1.071322286568E1,((((3[&rate=7.428775315544855E-4]:2.429541551319E0,4[&rate=6.176424753737096E-4]:2.429541551319E0)[&rate=6.838831575220492E-4]:6.357281928055E-1,2[&rate=6.578690025376304E-4]:3.065269744125E0)[&rate=7.428775315544855E-4]:1.03353497822E1,5[&rate=4.542252632221988E-4]:1.340061952632E1)[&rate=4.7195668349570187E-4]:1.638804335881E0,((7[&rate=3.2860360326788753E-4]:8.913458515059E0,6[&rate=5.648686521781673E-4]:8.913458515059E0)[&rate=4.448179629208303E-4]:9.070344619762E-1,1[&rate=7.023310676281167E-4]:9.820492977035E0)[&rate=7.905847375227864E-4]:5.218930885171E0)[&rate=5.42590951954683E-4]:5.566063464406E1)[&rate=5.42590951954683E-4]:9.293299442575E-1)[&rate=7.119620333608019E-4]:1.787732723374E0)[&rate=7.777768856068012E-4]:2.481605583379E-1,25[&rate=5.045725522097837E-4]:7.366528173223E1)[&rate=7.219052492300305E-4]:1.21252047102E0,((((11[&rate=3.719542844083264E-4]:1.696086843838E1,29[&rate=7.023310676281167E-4]:1.696086843838E1)[&rate=6.578690025376304E-4]:5.239949549312E1,(33[&rate=7.219052492300305E-4]:6.063053543456E1,13[&rate=4.804027902846761E-4]:6.063053543456E1)[&rate=6.022905128021441E-4]:8.729828496933E0)[&rate=9.6324808773468E-4]:2.098865710478E0,(19[&rate=7.5399562035947E-4]:1.426245762704E1,18[&rate=8.684544906869791E-4]:1.426245762704E1)[&rate=3.874827955526875E-4]:5.719677201494E1)[&rate=4.244707875227891E-4]:1.164284991155E0,((10[&rate=5.351175349519253E-4]:2.2454288141E1,31[&rate=7.5399562035947E-4]:2.2454288141E1)[&rate=3.874827955526875E-4]:4.918610143369E1,23[&rate=5.797327671084461E-4]:7.164038957469E1)[&rate=4.966773435744941E-4]:9.831250584412E-1)[&rate=6.750132744376925E-4]:2.254287570123E0)[&rate=4.244707875227891E-4]:3.743811444367E0,(17[&rate=9.347931782956376E-4]:6.684282369814E1,(27[&rate=5.574529279242441E-4]:2.413559643287E1,28[&rate=9.969582181986244E-4]:2.413559643287E1)[&rate=8.339020694832941E-4]:4.270722726527E1)[&rate=4.804027902846761E-4]:1.177878994948E1)[&rate=0.0010934915817671375]:5.046453899516E1); +tree STATE_290000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55148.13088525634,EEF_ucld_branchRates=-266.168517335019,lnP=-55148.13088525634,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.80504285507175E-4]:9.328419597973E0,9[&rate=0.0011872889541274224]:9.328419597973E0)[&rate=8.618496752849605E-4]:4.321668890523E0,15[&rate=5.990791814502593E-4]:1.36500884885E1)[&rate=8.618496752849605E-4]:1.028175133768E2,(14[&rate=0.0012987822633672617]:4.331040452931E1,24[&rate=0.0012987822633672617]:4.331040452931E1)[&rate=7.40644812148554E-4]:7.315719733596E1)[&rate=9.399714438897914E-4]:1.286740234312E1,((((12[&rate=9.399714438897914E-4]:7.289366836027E1,((16[&rate=8.281205396261675E-4]:2.855098852516E1,((22[&rate=4.916883757336114E-4]:2.653894794424E0,21[&rate=4.0862772252842885E-4]:2.653894794424E0)[&rate=7.822334914725681E-4]:3.747181518079E0,20[&rate=0.0011437681047877296]:6.401076312503E0)[&rate=0.001237971799735081]:2.214991221265E1)[&rate=8.122629048320057E-4]:4.280401916975E1,(((30[&rate=8.79884048578548E-4]:4.878258062076E1,26[&rate=4.461754157602839E-4]:4.878258062076E1)[&rate=7.969862223327921E-4]:9.896646681239E0,32[&rate=5.990791814502593E-4]:5.8679227302E1)[&rate=2.7643474033596505E-4]:8.826123615671E0,((((3[&rate=0.0011055748552385252]:2.090579115184E0,4[&rate=9.624905278354314E-4]:2.090579115184E0)[&rate=0.001040686369893425]:2.13091452373E-1,2[&rate=7.969862223327921E-4]:2.303670567557E0)[&rate=5.34875088549741E-4]:1.09387386619E1,5[&rate=3.649263539585408E-4]:1.324240922945E1)[&rate=4.6937452589461767E-4]:1.592956727488E0,((7[&rate=4.461754157602839E-4]:8.109289230503E0,6[&rate=9.188106887960609E-4]:8.109289230503E0)[&rate=5.02618237058541E-4]:1.074273857939E0,1[&rate=5.990791814502593E-4]:9.183563088442E0)[&rate=3.9498263091071163E-4]:5.651802868499E0)[&rate=5.882751029549724E-4]:5.266998496073E1)[&rate=5.668461041377627E-4]:3.84965677724E0)[&rate=0.0011872889541274224]:1.538660665362E0)[&rate=5.34875088549741E-4]:6.302561207517E-1,25[&rate=8.618496752849605E-4]:7.352392448102E1)[&rate=6.662782538377766E-4]:1.051476320664E0,((((11[&rate=4.916883757336114E-4]:1.726709439355E1,29[&rate=6.209546939070735E-4]:1.726709439355E1)[&rate=7.275386426959252E-4]:5.240049770253E1,(33[&rate=6.780478464944935E-4]:6.200958900807E1,13[&rate=4.461754157602839E-4]:6.200958900807E1)[&rate=4.0862772252842885E-4]:7.658003088009E0)[&rate=3.478400867667744E-4]:2.120473495502E0,(19[&rate=0.0011437681047877296]:1.257137269664E1,18[&rate=5.561851125951048E-4]:1.257137269664E1)[&rate=4.6937452589461767E-4]:5.921669289494E1)[&rate=3.285618438778209E-4]:1.174479133022E0,((10[&rate=6.320614942815525E-4]:1.78052031027E1,31[&rate=7.822334914725681E-4]:1.78052031027E1)[&rate=5.45534754378577E-4]:5.291605149941E1,23[&rate=4.6937452589461767E-4]:7.072125460211E1)[&rate=8.79884048578548E-4]:2.241290122498E0)[&rate=5.775366819571403E-4]:1.612856077084E0)[&rate=6.209546939070735E-4]:5.479259836453E0,(17[&rate=8.281205396261675E-4]:6.973214824994E1,(27[&rate=6.320614942815525E-4]:2.846443620883E1,28[&rate=0.0012987822633672617]:2.846443620883E1)[&rate=5.775366819571403E-4]:4.126771204111E1)[&rate=7.275386426959252E-4]:1.03225123882E1)[&rate=0.001477378708947271]:4.928034357024E1); +tree STATE_300000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.97814248667,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.97814248667,RHOD_ucld_branchRates=-266.168517335019] = [&R] 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+tree STATE_310000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.835238652406,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.835238652406,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.783859962822616E-4]:7.86409174467E0,9[&rate=8.09549886653282E-4]:7.86409174467E0)[&rate=7.926754359974824E-4]:5.820255088903E0,15[&rate=6.303098313419685E-4]:1.368434683357E1)[&rate=7.316824757003786E-4]:9.548336441473E1,(14[&rate=9.321671216434174E-4]:4.086993779842E1,24[&rate=0.0011308447054968673]:4.086993779842E1)[&rate=0.001087629702179525]:6.829777344988E1)[&rate=5.331518959431695E-4]:1.775282299697E1,(((25[&rate=7.765217560698567E-4]:7.703075306703E1,((((11[&rate=5.331518959431695E-4]:1.820653657137E1,29[&rate=3.5866793483694235E-4]:1.820653657137E1)[&rate=6.783859962822616E-4]:5.544028547673E1,(33[&rate=7.460862181405423E-4]:6.187283902927E1,13[&rate=3.4496151173705927E-4]:6.187283902927E1)[&rate=5.126029855880377E-4]:1.177398301882E1)[&rate=0.0011308447054968673]:1.815665813495E-1,(19[&rate=4.5074395442092074E-4]:2.097231310525E1,18[&rate=0.0011308447054968673]:2.097231310525E1)[&rate=3.958127684809231E-4]:5.285607552419E1)[&rate=5.228590069928957E-4]:1.460165842989E0,((10[&rate=5.966503520767643E-4]:1.771020788805E1,31[&rate=5.857740297675222E-4]:1.771020788805E1)[&rate=5.126029855880377E-4]:5.523810591347E1,23[&rate=5.64425331204165E-4]:7.294831380152E1)[&rate=9.855616852513195E-4]:2.340240670912E0)[&rate=4.7156978188916E-4]:1.742198594601E0)[&rate=4.4016182841007215E-4]:2.021650892914E-1,(((((3[&rate=7.460862181405423E-4]:1.871131876423E0,4[&rate=3.839455591238722E-4]:1.871131876423E0)[&rate=0.001241862800727849]:5.733313679341E-1,2[&rate=4.0730138896515045E-4]:2.444463244357E0)[&rate=8.09549886653282E-4]:9.382056724206E0,5[&rate=3.1412318568477504E-4]:1.182651996856E1)[&rate=8.45826423658717E-4]:2.778137006931E0,((7[&rate=5.966503520767643E-4]:6.558442896726E0,1[&rate=3.1412318568477504E-4]:6.558442896726E0)[&rate=3.1412318568477504E-4]:9.142854402811E-1,6[&rate=9.084248476469023E-4]:7.472728337007E0)[&rate=4.5074395442092074E-4]:7.131928638486E0)[&rate=5.331518959431695E-4]:5.983990048885E1,((((30[&rate=8.45826423658717E-4]:4.737190539612E1,26[&rate=5.434991714782479E-4]:4.737190539612E1)[&rate=7.460862181405423E-4]:1.543469287606E1,32[&rate=4.921281541380928E-4]:6.280659827218E1)[&rate=5.126029855880377E-4]:9.187598342879E0,(16[&rate=4.2942231287323497E-4]:2.831705262712E1,((22[&rate=3.7160550993674783E-4]:2.441419893492E0,21[&rate=5.539179842085052E-4]:2.441419893492E0)[&rate=9.321671216434174E-4]:3.114673697965E0,20[&rate=6.419404192946778E-4]:5.556093591457E0)[&rate=0.0014205487296152358]:2.276095903566E1)[&rate=7.316824757003786E-4]:4.367714398795E1)[&rate=8.45826423658717E-4]:6.403202960055E-1,12[&rate=8.272326050776073E-4]:7.263451691107E1)[&rate=3.3023939999086695E-4]:1.810040553277E0)[&rate=0.001087629702179525]:2.788360691981E0)[&rate=3.1412318568477504E-4]:2.21444987306E0,(17[&rate=6.783859962822616E-4]:7.078614106091E1,(27[&rate=4.0730138896515045E-4]:3.170229989166E1,28[&rate=0.001241862800727849]:3.170229989166E1)[&rate=0.001049763495741623]:3.908384116925E1)[&rate=5.857740297675222E-4]:8.661226968475E0)[&rate=0.0014205487296152358]:4.747316621588E1); +tree STATE_320000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55120.08869181443,EEF_ucld_branchRates=-266.168517335019,lnP=-55120.08869181443,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.0718979539547434E-4]:8.62141655943E0,9[&rate=8.893105022078821E-4]:8.62141655943E0)[&rate=2.9171387112025815E-4]:8.468703867485E0,15[&rate=2.9171387112025815E-4]:1.709012042692E1)[&rate=0.0011980547434518984]:8.904445602713E1,(14[&rate=0.0015043765998773123]:4.365766982755E1,24[&rate=8.661876788772245E-4]:4.365766982755E1)[&rate=9.97892066946853E-4]:6.24769066265E1)[&rate=3.740357265160861E-4]:1.133512924841E1,(((25[&rate=5.028863196117131E-4]:7.207133506376E1,(((16[&rate=3.0718979539547434E-4]:2.87321035452E1,((22[&rate=5.384828560390958E-4]:2.445183082451E0,21[&rate=8.234697503976938E-4]:2.445183082451E0)[&rate=9.97892066946853E-4]:3.000577003737E0,20[&rate=6.999949880548192E-4]:5.445760086187E0)[&rate=0.0016441064264122568]:2.328634345901E1)[&rate=0.0011980547434518984]:3.954275757615E1,(((((3[&rate=4.21772588919128E-4]:2.241633155084E0,4[&rate=6.009749880740397E-4]:2.241633155084E0)[&rate=6.275836487738687E-4]:3.502739002629E-1,2[&rate=0.0010659909348576804]:2.591907055347E0)[&rate=0.001254678489816079]:7.413941033851E0,5[&rate=4.796112313164184E-4]:1.00058480892E1)[&rate=0.0011980547434518984]:2.125298595579E0,((7[&rate=2.7491856637965425E-4]:6.171248922878E0,1[&rate=5.146406977180895E-4]:6.171248922878E0)[&rate=5.753789405276036E-4]:8.919761884613E-1,6[&rate=0.001254678489816079]:7.06322511134E0)[&rate=5.26499621581543E-4]:5.067921573436E0)[&rate=5.146406977180895E-4]:5.438120081464E1,((30[&rate=9.67840313216272E-4]:5.160826138662E1,26[&rate=7.664245646437482E-4]:5.160826138662E1)[&rate=8.893105022078821E-4]:6.578350506767E0,32[&rate=3.487524343507586E-4]:5.818661189339E1)[&rate=5.753789405276036E-4]:8.325735606023E0)[&rate=3.740357265160861E-4]:1.762513621935E0)[&rate=0.0011980547434518984]:1.015153134413E0,12[&rate=8.036184380332502E-4]:6.929001425576E1)[&rate=6.009749880740397E-4]:2.781320807998E0)[&rate=3.35507526098214E-4]:1.046615209578E0,((((11[&rate=4.796112313164184E-4]:2.191322208005E1,29[&rate=6.847095811714894E-4]:2.191322208005E1)[&rate=8.442869659914175E-4]:4.642167828703E1,(33[&rate=8.036184380332502E-4]:5.900853216635E1,13[&rate=2.5620208969292477E-4]:5.900853216635E1)[&rate=7.489194505655521E-4]:9.326368200728E0)[&rate=0.0013212413489066277]:8.422953866679E-1,(19[&rate=5.26499621581543E-4]:1.915488834336E1,18[&rate=4.21772588919128E-4]:1.915488834336E1)[&rate=3.35507526098214E-4]:5.002230741038E1)[&rate=4.333969154944361E-4]:2.763516574703E0,((10[&rate=6.999949880548192E-4]:1.942783223011E1,31[&rate=7.489194505655521E-4]:1.942783223011E1)[&rate=3.9823142651795873E-4]:5.081087669559E1,23[&rate=4.912165913798251E-4]:7.02387089257E1)[&rate=8.442869659914175E-4]:1.702003402746E0)[&rate=3.740357265160861E-4]:1.17723794489E0)[&rate=7.664245646437482E-4]:3.317800636242E0,(17[&rate=7.489194505655521E-4]:6.678684118894E1,(27[&rate=4.1006249158597976E-4]:3.069909978544E1,28[&rate=4.796112313164184E-4]:3.069909978544E1)[&rate=5.629020524501354E-4]:3.608774140349E1)[&rate=6.413318960392741E-4]:9.648909720642E0)[&rate=0.0016441064264122568]:4.103395479288E1); +tree STATE_330000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55164.152298851615,EEF_ucld_branchRates=-266.168517335019,lnP=-55164.152298851615,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.199149826163236E-4]:9.384460177684E0,9[&rate=0.0012469087659199754]:9.384460177684E0)[&rate=3.305536130628265E-4]:7.350740554985E0,15[&rate=9.858207584546319E-4]:1.673520073267E1)[&rate=7.075857763002685E-4]:9.386854805965E1,(14[&rate=0.0011673476851416934]:5.105961392189E1,24[&rate=5.907157969391524E-4]:5.105961392189E1)[&rate=9.555599745759055E-4]:5.954413487043E1)[&rate=5.264782879959428E-4]:9.17345289944E0,(((25[&rate=6.615305959940946E-4]:7.323101982938E1,((((33[&rate=5.085833759679743E-4]:5.990765079787E1,13[&rate=3.4542942912011245E-4]:5.990765079787E1)[&rate=5.085833759679743E-4]:8.502648884363E0,(11[&rate=5.354576232040577E-4]:1.626819082667E1,29[&rate=4.996362761927792E-4]:1.626819082667E1)[&rate=7.60278334505037E-4]:5.214210885556E1)[&rate=4.3521852579320815E-4]:1.64662442532E0,(19[&rate=7.901730739308938E-4]:2.171368041397E1,18[&rate=4.154312207703542E-4]:2.171368041397E1)[&rate=4.5417514853360053E-4]:4.834324369358E1)[&rate=4.254506906912544E-4]:1.890197699984E0,((10[&rate=8.41401620768132E-4]:1.944602333553E1,31[&rate=6.955530386346045E-4]:1.944602333553E1)[&rate=3.4542942912011245E-4]:5.22190672385E1,23[&rate=4.5417514853360053E-4]:7.166509057402E1)[&rate=6.955530386346045E-4]:2.820312335142E-1)[&rate=6.955530386346045E-4]:1.283898021843E0)[&rate=3.4542942912011245E-4]:2.607579516628E0,((((30[&rate=7.60278334505037E-4]:4.946883982087E1,26[&rate=7.329203071104281E-4]:4.946883982087E1)[&rate=0.0010202018918278215]:1.035925834092E1,32[&rate=4.6343463865328903E-4]:5.982809816178E1)[&rate=5.719348986832371E-4]:1.087626525383E1,(12[&rate=7.075857763002685E-4]:6.911216622174E1,(16[&rate=4.051039324078304E-4]:3.304512324986E1,((22[&rate=7.329203071104281E-4]:3.45958541395E0,21[&rate=7.74869972046392E-4]:3.45958541395E0)[&rate=0.0010202018918278215]:3.820668740311E0,20[&rate=4.906669989183058E-4]:7.280254154261E0)[&rate=0.0010601111026454838]:2.57648690956E1)[&rate=7.329203071104281E-4]:3.606704297188E1)[&rate=5.719348986832371E-4]:1.59219719387E0)[&rate=3.8322405995839837E-4]:7.59425696601E-1,((((3[&rate=8.607191879175151E-4]:1.953203770814E0,4[&rate=7.74869972046392E-4]:1.953203770814E0)[&rate=6.10022467986193E-4]:2.162746567236E-1,2[&rate=3.305536130628265E-4]:2.169478427538E0)[&rate=6.615305959940946E-4]:7.12997506233E0,5[&rate=4.996362761927792E-4]:9.299453489868E0)[&rate=4.5417514853360053E-4]:1.368877075476E0,((7[&rate=6.507767260590256E-4]:7.674137649139E0,6[&rate=5.812676321762341E-4]:7.674137649139E0)[&rate=4.154312207703542E-4]:4.521865096779E-1,1[&rate=5.264782879959428E-4]:8.126324158817E0)[&rate=9.555599745759055E-4]:2.542006406527E0)[&rate=5.812676321762341E-4]:6.079545854687E1)[&rate=3.136970909796024E-4]:4.374810233794E0)[&rate=3.8322405995839837E-4]:2.463037214622E0,(17[&rate=8.41401620768132E-4]:6.870268097877E1,(27[&rate=5.354576232040577E-4]:3.359872275239E1,28[&rate=9.039496872177095E-4]:3.359872275239E1)[&rate=9.858207584546319E-4]:3.510395822637E1)[&rate=5.354576232040577E-4]:9.598955581862E0)[&rate=0.0012469087659199754]:4.147556513113E1); +tree STATE_340000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55140.0048038921,EEF_ucld_branchRates=-266.168517335019,lnP=-55140.0048038921,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.8500072564249324E-4]:7.299734412181E0,9[&rate=7.742002573880922E-4]:7.299734412181E0)[&rate=2.711464834820805E-4]:8.393395505026E0,15[&rate=2.560811022262293E-4]:1.569312991721E1)[&rate=7.20215974328871E-4]:1.059140339068E2,(14[&rate=0.001231551174350848]:5.546027315874E1,24[&rate=7.373593849638331E-4]:5.546027315874E1)[&rate=0.0010583999783827993]:6.614689066531E1)[&rate=3.445687187668126E-4]:2.870032068051E0,(((25[&rate=5.329862121865757E-4]:7.558771873246E1,(((16[&rate=3.5539948206660734E-4]:3.347720526631E1,((22[&rate=2.3925325272328371E-4]:3.182657574665E0,21[&rate=3.660318345992468E-4]:3.182657574665E0)[&rate=6.171935201323076E-4]:4.181560119265E0,20[&rate=8.873872869535182E-4]:7.36421769393E0)[&rate=0.0011065830848844326]:2.611298757238E1)[&rate=0.0011631239989753183]:3.667162645896E1,(((30[&rate=6.441534273268045E-4]:5.138882957727E1,26[&rate=5.002246558336993E-4]:5.138882957727E1)[&rate=0.0013181721819286276]:9.47176712882E0,32[&rate=4.1754034420116767E-4]:6.086059670608E1)[&rate=7.20215974328871E-4]:7.174207405295E0,((((2[&rate=5.794559677935096E-4]:2.153922745105E0,4[&rate=7.941144184387014E-4]:2.153922745105E0)[&rate=7.20215974328871E-4]:6.228262504043E-1,3[&rate=2.3925325272328371E-4]:2.77674899551E0)[&rate=6.171935201323076E-4]:7.374302967651E0,5[&rate=3.8686929868338605E-4]:1.015105196316E1)[&rate=0.0010164040179676142]:1.38384646379E0,((7[&rate=2.560811022262293E-4]:7.129642670811E0,6[&rate=3.10287028190222E-4]:7.129642670811E0)[&rate=4.3789223429771106E-4]:1.180041292795E0,1[&rate=4.481024648089928E-4]:8.309683963606E0)[&rate=3.8686929868338605E-4]:3.225214463344E0)[&rate=5.442639297972637E-4]:5.649990568443E1)[&rate=6.441534273268045E-4]:2.114027613888E0)[&rate=9.79166115383253E-4]:1.631997560514E0,12[&rate=7.742002573880922E-4]:7.178082928578E1)[&rate=4.79091542753898E-4]:3.806889446677E0)[&rate=6.728983327951417E-4]:1.744389050404E0,((((33[&rate=7.742002573880922E-4]:6.172327729797E1,13[&rate=3.8686929868338605E-4]:6.172327729797E1)[&rate=3.660318345992468E-4]:1.016327167061E1,(11[&rate=5.218998907311381E-4]:1.594550485844E1,29[&rate=8.616108009322891E-4]:1.594550485844E1)[&rate=6.880543346634598E-4]:5.594104411013E1)[&rate=3.8686929868338605E-4]:7.868921562888E-1,(19[&rate=4.79091542753898E-4]:1.898367700893E1,18[&rate=0.0011631239989753183]:1.898367700893E1)[&rate=5.442639297972637E-4]:5.368976411593E1)[&rate=3.10287028190222E-4]:2.249407945422E0,((10[&rate=5.329862121865757E-4]:2.706891955208E1,31[&rate=6.728983327951417E-4]:2.706891955208E1)[&rate=3.3348657930010346E-4]:4.654300132282E1,23[&rate=4.6868444578504573E-4]:7.361192087489E1)[&rate=9.79166115383253E-4]:1.31092819539E0)[&rate=4.3789223429771106E-4]:2.409258712578E0)[&rate=4.89599168143165E-4]:4.667033084742E0,(17[&rate=8.616108009322891E-4]:7.521695068874E1,(27[&rate=4.481024648089928E-4]:2.94072440983E1,28[&rate=0.0011065830848844326]:2.94072440983E1)[&rate=4.79091542753898E-4]:4.580970659044E1)[&rate=6.880543346634598E-4]:6.782190178868E0)[&rate=0.0014360106941210104]:4.247805502449E1); +tree STATE_350000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.98311687989,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.98311687989,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.2931123543252713E-4]:7.565641480275E0,9[&rate=6.668130719934744E-4]:7.565641480275E0)[&rate=7.004471630802707E-4]:1.018742936731E1,15[&rate=4.126762273166434E-4]:1.775307084758E1)[&rate=8.038723838870969E-4]:1.105168168751E2,(14[&rate=9.60365278436905E-4]:5.708047744717E1,24[&rate=6.218243683289752E-4]:5.708047744717E1)[&rate=0.0010045017510117759]:7.11894102755E1)[&rate=2.2931123543252713E-4]:1.115983299061E0,(((25[&rate=6.668130719934744E-4]:7.691588628736E1,(((16[&rate=3.3836276493082716E-4]:3.817611907732E1,((22[&rate=6.511671830441057E-4]:2.670096528631E0,21[&rate=4.4107201505269155E-4]:2.670096528631E0)[&rate=6.080011144387253E-4]:4.25394050273E0,20[&rate=4.31518675661454E-4]:6.924037031361E0)[&rate=0.001306707054222528]:3.125208204596E1)[&rate=0.0010563168828811695]:3.403271135635E1,12[&rate=0.0010563168828811695]:7.220883043367E1)[&rate=2.2931123543252713E-4]:1.523304884669E0,(((30[&rate=5.946721401622028E-4]:4.763692109534E1,26[&rate=4.704510243293309E-4]:4.763692109534E1)[&rate=8.038723838870969E-4]:1.27586956146E1,32[&rate=3.477608468741531E-4]:6.039561670994E1)[&rate=4.5073445438934234E-4]:9.907144596755E0,((((3[&rate=6.218243683289752E-4]:2.038105768053E0,4[&rate=3.9408026242344457E-4]:2.038105768053E0)[&rate=4.704510243293309E-4]:4.432190323603E-1,2[&rate=3.5708312536747927E-4]:2.481324800413E0)[&rate=8.572014798729186E-4]:6.889285282051E0,5[&rate=4.908021482855587E-4]:9.370610082464E0)[&rate=5.693199884690775E-4]:2.219642316096E0,((7[&rate=4.8053850783313614E-4]:7.247125645586E0,6[&rate=4.31518675661454E-4]:7.247125645586E0)[&rate=8.878269294127084E-4]:6.828624156791E-1,1[&rate=4.126762273166434E-4]:7.929988061265E0)[&rate=3.477608468741531E-4]:3.660264337295E0)[&rate=4.908021482855587E-4]:5.871250890813E1)[&rate=2.993603492303813E-4]:3.429374011645E0)[&rate=3.288602348456124E-4]:3.183750969025E0)[&rate=3.1921999003712166E-4]:1.749876018542E0,((((11[&rate=7.004471630802707E-4]:1.77971377438E1,29[&rate=4.033555050521975E-4]:1.77971377438E1)[&rate=9.219115606708201E-4]:5.234938081195E1,(33[&rate=7.186341670765685E-4]:6.262413835368E1,13[&rate=2.783478864163879E-4]:6.262413835368E1)[&rate=2.2931123543252713E-4]:7.52238020207E0)[&rate=4.31518675661454E-4]:2.065047370915E0,(19[&rate=5.817919197274414E-4]:1.741959706793E1,18[&rate=6.511671830441057E-4]:1.741959706793E1)[&rate=3.755981237538701E-4]:5.479196885873E1)[&rate=2.6720263647309224E-4]:4.092754259411E0,((10[&rate=3.9408026242344457E-4]:2.590590288957E1,31[&rate=0.0010045017510117759]:2.590590288957E1)[&rate=2.890339613209342E-4]:4.87027852883E1,23[&rate=6.511671830441057E-4]:7.460868817787E1)[&rate=5.228423210288277E-4]:1.695632008202E0)[&rate=3.477608468741531E-4]:2.361442119832E0)[&rate=3.094026100694693E-4]:3.340952863547E0,(17[&rate=7.803075811097269E-4]:7.10361419093E1,(27[&rate=5.572201506491944E-4]:2.898298849902E1,28[&rate=0.0010563168828811695]:2.898298849902E1)[&rate=5.817919197274414E-4]:4.205315341028E1)[&rate=2.2931123543252713E-4]:1.097057326015E1)[&rate=0.0011985231478246726]:4.737915585229E1); +tree STATE_360000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55144.23194976868,EEF_ucld_branchRates=-266.168517335019,lnP=-55144.23194976868,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.9036126586915627E-4]:7.992500105232E0,9[&rate=0.001330167410190824]:7.992500105232E0)[&rate=2.7208481364771254E-4]:1.298222852658E1,15[&rate=4.128225176447285E-4]:2.097472863181E1)[&rate=5.828511996928257E-4]:1.005024825484E2,(14[&rate=9.855101789570866E-4]:4.660692070641E1,24[&rate=0.0011413427501226758]:4.660692070641E1)[&rate=0.0010955921307004414]:7.487029047385E1)[&rate=7.735387203317878E-4]:7.628021143953E0,(((25[&rate=7.735387203317878E-4]:7.438492844814E1,(((16[&rate=2.7208481364771254E-4]:3.603875218492E1,((22[&rate=5.586566083823783E-4]:3.007795040174E0,21[&rate=6.762079486406869E-4]:3.007795040174E0)[&rate=5.123749152906806E-4]:4.806722516883E0,20[&rate=4.899772013367455E-4]:7.814517557058E0)[&rate=0.0014247361269235236]:2.822423462786E1)[&rate=0.001330167410190824]:3.387072113771E1,(((30[&rate=0.0010955921307004414]:5.028909597414E1,26[&rate=6.209446804137477E-4]:5.028909597414E1)[&rate=8.537793442501692E-4]:9.087093391985E0,32[&rate=4.788982320443306E-4]:5.937618936612E1)[&rate=5.237312395042528E-4]:9.30772294512E0,((((3[&rate=7.921460719124066E-4]:2.010013679926E0,4[&rate=3.9036126586915627E-4]:2.010013679926E0)[&rate=2.540248296388278E-4]:1.556293861977E-1,2[&rate=5.586566083823783E-4]:2.165643066124E0)[&rate=8.766923713049368E-4]:7.844883268456E0,5[&rate=5.828511996928257E-4]:1.001052633458E1)[&rate=8.537793442501692E-4]:2.113791419451E0,((7[&rate=0.0012555107719922777]:6.734390541515E0,6[&rate=5.352175357440848E-4]:6.734390541515E0)[&rate=4.6787360788713505E-4]:8.351924407384E-1,1[&rate=3.303404084242987E-4]:7.569582982254E0)[&rate=2.8826383651629674E-4]:4.554734771777E0)[&rate=5.352175357440848E-4]:5.655959455721E1)[&rate=4.568833511328086E-4]:1.225561011384E0)[&rate=7.735387203317878E-4]:1.97154435633E0,12[&rate=9.271369461214454E-4]:7.188101767896E1)[&rate=7.386432489810813E-4]:2.50391076918E0)[&rate=3.303404084242987E-4]:7.00986193966E-1,((((11[&rate=4.788982320443306E-4]:2.129183066913E1,29[&rate=3.4303708910610317E-4]:2.129183066913E1)[&rate=7.063545484398032E-4]:4.650803734128E1,(33[&rate=8.321480931952724E-4]:6.211443918041E1,13[&rate=4.128225176447285E-4]:6.211443918041E1)[&rate=3.553069096937381E-4]:5.68542883001E0)[&rate=0.0011413427501226758]:2.201117019389E0,(19[&rate=9.551679157997913E-4]:2.013529770296E1,18[&rate=4.128225176447285E-4]:2.013529770296E1)[&rate=2.7208481364771254E-4]:4.986568732685E1)[&rate=3.9036126586915627E-4]:2.454334857323E0,((10[&rate=3.9036126586915627E-4]:2.449469631288E1,31[&rate=7.063545484398032E-4]:2.449469631288E1)[&rate=4.6787360788713505E-4]:4.642273828654E1,23[&rate=7.222048037579182E-4]:7.091743459941E1)[&rate=6.910383124455425E-4]:1.537885287714E0)[&rate=5.706490470005464E-4]:2.630594754974E0)[&rate=4.239015084628049E-4]:2.34233701637E0,(17[&rate=7.735387203317878E-4]:6.437116169034E1,(27[&rate=5.011298042311908E-4]:2.801771310577E1,28[&rate=0.0012555107719922777]:2.801771310577E1)[&rate=6.910383124455425E-4]:3.635344858457E1)[&rate=6.618203905546064E-4]:1.305708996813E1)[&rate=0.0014247361269235236]:5.167698066574E1); +tree STATE_370000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55120.54834236956,EEF_ucld_branchRates=-266.168517335019,lnP=-55120.54834236956,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.2571128467102086E-4]:8.65575358525E0,9[&rate=6.092093528403125E-4]:8.65575358525E0)[&rate=3.6589440696887843E-4]:9.912251014151E0,15[&rate=5.284319883732004E-4]:1.85680045994E1)[&rate=8.91127038171747E-4]:9.336079262494E1,(14[&rate=0.0011637269197829997]:4.932478400773E1,24[&rate=8.91127038171747E-4]:4.932478400773E1)[&rate=9.910727556127772E-4]:6.260401321662E1)[&rate=6.891453312923163E-4]:1.740450119242E1,(((25[&rate=8.187372205277585E-4]:7.598962721367E1,((12[&rate=8.525858200782565E-4]:7.195480095474E1,(16[&rate=4.74567816609892E-4]:3.80078952537E1,((22[&rate=6.092093528403125E-4]:3.657567811239E0,21[&rate=0.0010619083749923465]:3.657567811239E0)[&rate=4.557269496781525E-4]:3.637394613072E0,20[&rate=4.557269496781525E-4]:7.294962424311E0)[&rate=0.0013529785126726087]:3.071293282939E1)[&rate=8.187372205277585E-4]:3.394690570105E1)[&rate=7.742850623162123E-4]:1.118544577968E0,(((30[&rate=7.352816325886436E-4]:4.620322721779E1,26[&rate=7.1151422637361E-4]:4.620322721779E1)[&rate=6.784038658200779E-4]:1.002652306921E1,32[&rate=4.557269496781525E-4]:5.622975028701E1)[&rate=4.038338852137106E-4]:1.307409549414E1,((((3[&rate=6.891453312923163E-4]:2.115486988277E0,4[&rate=7.607695189356256E-4]:2.115486988277E0)[&rate=3.338810235614056E-4]:3.579320057099E-1,2[&rate=5.195949314692891E-4]:2.473418993987E0)[&rate=6.377878693286522E-4]:7.904539445729E0,5[&rate=3.6589440696887843E-4]:1.037795843972E1)[&rate=5.372562424385791E-4]:1.673649338594E0,((7[&rate=5.907906515107808E-4]:6.866139816564E0,6[&rate=6.092093528403125E-4]:6.866139816564E0)[&rate=5.817251330571535E-4]:1.342817290293E0,1[&rate=5.638089927918258E-4]:8.208957106856E0)[&rate=5.372562424385791E-4]:3.842650671454E0)[&rate=6.891453312923163E-4]:5.725223800284E1)[&rate=4.557269496781525E-4]:3.769499751567E0)[&rate=5.727360274597224E-4]:2.916281680962E0)[&rate=7.352816325886436E-4]:6.314183556019E-1,((((11[&rate=4.837564289052699E-4]:2.001579459214E1,29[&rate=4.360167725583312E-4]:2.001579459214E1)[&rate=7.477870002010887E-4]:5.05079608847E1,(33[&rate=7.477870002010887E-4]:6.285606868194E1,13[&rate=3.338810235614056E-4]:6.285606868194E1)[&rate=5.638089927918258E-4]:7.66768679489E0)[&rate=0.0011072663149875885]:1.349105458778E0,(19[&rate=7.001721623700593E-4]:1.581213752454E1,18[&rate=9.910727556127772E-4]:1.581213752454E1)[&rate=3.338810235614056E-4]:5.606072341107E1)[&rate=6.679208324405266E-4]:1.818655528467E0,((10[&rate=4.150145341679261E-4]:2.34996347353E1,31[&rate=5.372562424385791E-4]:2.34996347353E1)[&rate=4.74567816609892E-4]:4.850383732859E1,23[&rate=7.352816325886436E-4]:7.200347206388E1)[&rate=5.817251330571535E-4]:1.688044400194E0)[&rate=9.362234407094129E-4]:2.929529105198E0)[&rate=5.460837193704791E-4]:3.178911670002E0,(17[&rate=9.910727556127772E-4]:7.190455498876E1,(27[&rate=4.74567816609892E-4]:2.800419099067E1,28[&rate=0.0011072663149875885]:2.800419099067E1)[&rate=5.018130324777344E-4]:4.390036399808E1)[&rate=8.031858842731698E-4]:7.895402250522E0)[&rate=0.0010619083749923465]:4.953334117749E1); +tree STATE_380000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55149.64650959004,EEF_ucld_branchRates=-266.168517335019,lnP=-55149.64650959004,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.326845677091347E-4]:7.221027308879E0,9[&rate=6.792167394659755E-4]:7.221027308879E0)[&rate=7.921831335468257E-4]:7.29186265042E0,15[&rate=4.8131935674770453E-4]:1.45128899593E1)[&rate=7.673338887139629E-4]:9.371418572623E1,(14[&rate=0.0010803732754328889]:5.023477700599E1,24[&rate=7.795720109023393E-4]:5.023477700599E1)[&rate=0.0011563681854345788]:5.799229867954E1)[&rate=8.624539462662446E-4]:1.544204261733E1,(((25[&rate=5.911840988952641E-4]:7.295008950485E1,(((((30[&rate=8.951245881029778E-4]:4.917738625511E1,26[&rate=6.296082297552757E-4]:4.917738625511E1)[&rate=8.052074818943434E-4]:1.11386368769E1,32[&rate=7.554329928173054E-4]:6.031602313201E1)[&rate=6.296082297552757E-4]:8.547191741441E0,((((3[&rate=4.4631648619581087E-4]:2.157258464715E0,4[&rate=5.720427955539006E-4]:2.157258464715E0)[&rate=0.001265467892128412]:4.408091755692E-1,2[&rate=0.0011155874857326554]:2.598067640284E0)[&rate=8.186906217609709E-4]:6.222317456591E0,5[&rate=4.5848150213762456E-4]:8.820385096876E0)[&rate=0.0011563681854345788]:2.772977866102E0,((7[&rate=0.0012049886468957292]:7.241297907922E0,6[&rate=8.186906217609709E-4]:7.241297907922E0)[&rate=3.700813547929858E-4]:1.174159445827E0,1[&rate=5.331700608572854E-4]:8.415457353749E0)[&rate=4.0499736836836574E-4]:3.177905609229E0)[&rate=5.911840988952641E-4]:5.726985191048E1)[&rate=5.231965227973708E-4]:1.455729683609E0,(16[&rate=5.027368813236687E-4]:3.425520035796E1,((22[&rate=6.199438949831083E-4]:3.690675265733E0,21[&rate=7.325178368501533E-4]:3.690675265733E0)[&rate=0.0011155874857326554]:2.716112745635E0,20[&rate=4.5848150213762456E-4]:6.406788011367E0)[&rate=0.0017314715923713697]:2.784841234659E1)[&rate=9.315530436773193E-4]:3.606374419911E1)[&rate=5.027368813236687E-4]:1.235601115951E0,12[&rate=8.052074818943434E-4]:7.155454567301E1)[&rate=6.690703636266528E-4]:1.395543831831E0)[&rate=5.527607262591192E-4]:1.509896621045E0,((((11[&rate=6.103289309309828E-4]:1.555283369581E1,29[&rate=8.783802886697805E-4]:1.555283369581E1)[&rate=6.199438949831083E-4]:5.159336716433E1,(33[&rate=9.128022213785478E-4]:6.192695330134E1,13[&rate=3.8865600366642483E-4]:6.192695330134E1)[&rate=6.199438949831083E-4]:5.219247558796E0)[&rate=6.895090252547684E-4]:2.863248447164E0,(19[&rate=5.027368813236687E-4]:1.618447806286E1,18[&rate=7.4383727821973E-4]:1.618447806286E1)[&rate=3.700813547929858E-4]:5.382497124443E1)[&rate=3.8865600366642483E-4]:2.649988537768E0,((10[&rate=5.911840988952641E-4]:2.785783319789E1,31[&rate=5.231965227973708E-4]:2.785783319789E1)[&rate=5.027368813236687E-4]:4.251793003057E1,23[&rate=7.554329928173054E-4]:7.037576322847E1)[&rate=6.690703636266528E-4]:2.283674616599E0)[&rate=5.720427955539006E-4]:1.800548280827E0)[&rate=9.730048571709354E-4]:2.571669531208E0,(17[&rate=0.0010214721199925906]:6.595326549953E1,(27[&rate=7.795720109023393E-4]:2.857267442014E1,28[&rate=0.0012049886468957292]:2.857267442014E1)[&rate=5.527607262591192E-4]:3.73805910794E1)[&rate=6.491470045208704E-4]:1.107839015757E1)[&rate=9.515489893227806E-4]:4.663746264576E1); +tree STATE_390000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55126.25413185855,EEF_ucld_branchRates=-266.168517335019,lnP=-55126.25413185855,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.258391030934407E-4]:8.786358449621E0,9[&rate=8.918580792882567E-4]:8.786358449621E0)[&rate=7.334771449872476E-4]:6.91963446672E0,15[&rate=5.01832757128293E-4]:1.570599291634E1)[&rate=7.334771449872476E-4]:1.00623040432E2,(14[&rate=0.001138742457675]:5.332158051898E1,24[&rate=9.309998875255093E-4]:5.332158051898E1)[&rate=0.001138742457675]:6.30074528294E1)[&rate=7.454188902840357E-4]:8.341046860981E0,(((25[&rate=5.979887219784931E-4]:7.206942104874E1,((((11[&rate=3.2924440927268884E-4]:1.739931641171E1,29[&rate=5.311582174218169E-4]:1.739931641171E1)[&rate=7.703731528427789E-4]:4.951666580421E1,(33[&rate=8.74018394178337E-4]:5.841954082873E1,13[&rate=3.691249468343066E-4]:5.841954082873E1)[&rate=0.001138742457675]:8.496441387189E0)[&rate=5.979887219784931E-4]:1.185113891106E0,(19[&rate=7.970213146747608E-4]:1.541223890467E1,18[&rate=8.111011434979639E-4]:1.541223890467E1)[&rate=6.67442722332991E-4]:5.268885720235E1)[&rate=0.001138742457675]:2.154863458634E0,((10[&rate=5.693488394719172E-4]:2.891708178318E1,31[&rate=4.917946820433468E-4]:2.891708178318E1)[&rate=5.01832757128293E-4]:3.918919204045E1,23[&rate=7.105010052262326E-4]:6.810627382363E1)[&rate=8.571313791585492E-4]:2.149685742031E0)[&rate=7.834629815825048E-4]:1.813461483081E0)[&rate=4.815703489265224E-4]:2.752350849416E0,(((((((2[&rate=5.503128366276395E-4]:1.863108152717E0,4[&rate=3.2924440927268884E-4]:1.863108152717E0)[&rate=5.407600076111336E-4]:7.062739622262E-1,3[&rate=4.258391030934407E-4]:2.569382114943E0)[&rate=5.884088346140905E-4]:8.865572541884E0,5[&rate=4.815703489265224E-4]:1.143495465683E1)[&rate=4.815703489265224E-4]:1.645825976172E0,((7[&rate=7.577054332286747E-4]:6.267239999755E0,6[&rate=9.107933275150232E-4]:6.267239999755E0)[&rate=0.0010972746274963384]:7.102673243353E-1,1[&rate=6.370048864304021E-4]:6.977507324091E0)[&rate=7.577054332286747E-4]:6.103273308908E0)[&rate=6.173264461345817E-4]:5.706705503968E1,((30[&rate=5.693488394719172E-4]:5.220321749523E1,26[&rate=6.076227722072069E-4]:5.220321749523E1)[&rate=0.0010972746274963384]:8.325065363347E0,32[&rate=3.691249468343066E-4]:6.052828285858E1)[&rate=4.493203179108345E-4]:9.619552814098E0)[&rate=7.334771449872476E-4]:1.23813962203E0,(16[&rate=6.571516114494879E-4]:3.258734143347E1,((22[&rate=6.470114601981507E-4]:3.644631111949E0,21[&rate=5.884088346140905E-4]:3.644631111949E0)[&rate=6.470114601981507E-4]:2.416175913257E0,20[&rate=5.01832757128293E-4]:6.060807025206E0)[&rate=0.001728086193297859]:2.652653440826E1)[&rate=7.834629815825048E-4]:3.879863386124E1)[&rate=7.970213146747608E-4]:1.791255909897E0,12[&rate=9.309998875255093E-4]:7.31772312046E1)[&rate=4.1319638832315115E-4]:1.644540693552E0)[&rate=5.693488394719172E-4]:3.558528860415E0,(17[&rate=0.0010299924486622707]:6.88307791847E1,(27[&rate=5.693488394719172E-4]:3.12501593069E1,28[&rate=9.761656507560791E-4]:3.12501593069E1)[&rate=9.107933275150232E-4]:3.75806198778E1)[&rate=4.1319638832315115E-4]:9.549521573873E0)[&rate=0.0011882455095299817]:4.628977945079E1); +tree STATE_400000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55152.56801412306,EEF_ucld_branchRates=-266.168517335019,lnP=-55152.56801412306,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.2143116109850275E-4]:7.371333017155E0,9[&rate=9.243896273527606E-4]:7.371333017155E0)[&rate=4.320494305691518E-4]:5.774922439934E0,15[&rate=4.4241165675095427E-4]:1.314625545709E1)[&rate=7.348719624978754E-4]:9.480576818865E1,(14[&rate=7.921028782321825E-4]:5.156130793655E1,24[&rate=0.0011208073610262943]:5.156130793655E1)[&rate=9.016713514689704E-4]:5.639071570919E1)[&rate=3.991784177105893E-4]:1.576140069055E1,(((25[&rate=5.301149232017577E-4]:7.214286862658E1,(((((((3[&rate=7.76922501270906E-4]:1.92517927403E0,4[&rate=4.4241165675095427E-4]:1.92517927403E0)[&rate=4.724016869662635E-4]:2.928273210258E-1,2[&rate=3.3196306360542464E-4]:2.218006595056E0)[&rate=7.091946380121143E-4]:7.562432133216E0,5[&rate=6.189368885360108E-4]:9.780438728271E0)[&rate=7.218287254781703E-4]:1.065147246923E0,((7[&rate=3.14307930029902E-4]:5.864933757487E0,6[&rate=5.589743498288685E-4]:5.864933757487E0)[&rate=9.490085674949967E-4]:1.058243372842E0,1[&rate=4.724016869662635E-4]:6.923177130329E0)[&rate=5.014227201882107E-4]:3.922408844865E0)[&rate=6.96931073996424E-4]:5.51397644001E1,((30[&rate=5.301149232017577E-4]:4.775472247423E1,26[&rate=5.7852336275327E-4]:4.775472247423E1)[&rate=0.0010767884114634642]:1.275928609319E1,32[&rate=3.6178564870811147E-4]:6.051400856743E1)[&rate=6.733809194994074E-4]:5.471341807872E0)[&rate=3.47576762527657E-4]:2.929387698761E0,(16[&rate=5.589743498288685E-4]:3.46514704311E1,((22[&rate=0.0011735239147742348]:2.384111406777E0,21[&rate=6.086278197703141E-4]:2.384111406777E0)[&rate=5.396939470711984E-4]:3.320402188739E0,20[&rate=4.724016869662635E-4]:5.704513595516E0)[&rate=0.0011735239147742348]:2.894695683558E1)[&rate=6.96931073996424E-4]:3.426326764296E1)[&rate=0.0010767884114634642]:1.494426114168E0,12[&rate=8.246511490347558E-4]:7.040916418823E1)[&rate=7.483678790655896E-4]:1.733704438351E0)[&rate=9.016713514689704E-4]:1.177610938923E0,((((33[&rate=7.483678790655896E-4]:5.038989168071E1,13[&rate=7.218287254781703E-4]:5.038989168071E1)[&rate=8.42213401981885E-4]:1.35547896939E1,(11[&rate=3.6178564870811147E-4]:1.943324981146E1,29[&rate=6.294124670515911E-4]:1.943324981146E1)[&rate=9.759209833962721E-4]:4.451143156315E1)[&rate=0.0011208073610262943]:1.343947474143E0,(19[&rate=7.218287254781703E-4]:1.75592756374E1,18[&rate=0.0011735239147742348]:1.75592756374E1)[&rate=5.301149232017577E-4]:4.772935321135E1)[&rate=5.589743498288685E-4]:5.813890438871E0,((10[&rate=8.607959559413742E-4]:2.5548783051E1,31[&rate=4.918131276484211E-4]:2.5548783051E1)[&rate=2.933981770285713E-4]:4.481214480848E1,23[&rate=5.589743498288685E-4]:7.036092785947E1)[&rate=5.493084311165247E-4]:7.415914281537E-1)[&rate=5.109968854932963E-4]:2.217960277873E0)[&rate=3.749699208862047E-4]:3.953912268302E0,(17[&rate=7.483678790655896E-4]:6.484224759831E1,(27[&rate=4.724016869662635E-4]:3.046498959083E1,28[&rate=8.80552282061555E-4]:3.046498959083E1)[&rate=6.294124670515911E-4]:3.437725800748E1)[&rate=6.086278197703141E-4]:1.243214423549E1)[&rate=0.0017586530372097429]:4.643903250249E1); +tree STATE_410000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55150.133720444865,EEF_ucld_branchRates=-266.168517335019,lnP=-55150.133720444865,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.766422114777086E-4]:7.951784480916E0,9[&rate=6.047437555840573E-4]:7.951784480916E0)[&rate=7.40156578254458E-4]:6.586973241007E0,15[&rate=9.099302745772548E-4]:1.453875772192E1)[&rate=8.486855463239783E-4]:1.003590937524E2,(14[&rate=0.0010563273878883752]:4.846156227806E1,24[&rate=8.486855463239783E-4]:4.846156227806E1)[&rate=8.307705446759234E-4]:6.64362891963E1)[&rate=4.910133617282512E-4]:1.459346207494E1,(((25[&rate=6.249254229570168E-4]:7.805696017883E1,((12[&rate=0.0010563273878883752]:7.085694669598E1,(16[&rate=4.4274104178984423E-4]:3.353236832647E1,((22[&rate=8.677226567719214E-4]:3.071112091619E0,21[&rate=5.003903374132837E-4]:3.071112091619E0)[&rate=7.022585782656087E-4]:3.83610902377E0,20[&rate=4.4274104178984423E-4]:6.907221115389E0)[&rate=0.0010985233305090317]:2.662514721108E1)[&rate=0.0010985233305090317]:3.732457836952E1)[&rate=6.047437555840573E-4]:4.111101488693E0,(((((3[&rate=7.271051455539042E-4]:2.266266773126E0,4[&rate=3.8882098567178866E-4]:2.266266773126E0)[&rate=6.675697168672942E-4]:2.648649564728E-1,2[&rate=4.326007555841311E-4]:2.531131729599E0)[&rate=4.815772193542227E-4]:9.269833153299E0,5[&rate=4.52672293887748E-4]:1.18009648829E1)[&rate=8.138310518335285E-4]:2.310096340039E0,((7[&rate=5.283643437170131E-4]:7.333077239801E0,6[&rate=5.470583698566775E-4]:7.333077239801E0)[&rate=5.470583698566775E-4]:1.182621543158E0,1[&rate=7.677535002570442E-4]:8.515698782959E0)[&rate=3.766422114777086E-4]:5.595362439978E0)[&rate=5.283643437170131E-4]:5.524457404096E1,((30[&rate=5.754851116474808E-4]:5.096180973678E1,26[&rate=5.948723463294537E-4]:5.096180973678E1)[&rate=0.0010985233305090317]:1.03824729774E1,32[&rate=3.6369068666469983E-4]:6.134428271418E1)[&rate=5.564671755217225E-4]:8.011352549713E0)[&rate=5.470583698566775E-4]:5.612412920784E0)[&rate=7.144863802592832E-4]:3.088911994149E0)[&rate=4.326007555841311E-4]:1.450280992016E0,((((33[&rate=7.677535002570442E-4]:5.871830151442E1,13[&rate=6.047437555840573E-4]:5.871830151442E1)[&rate=2.963309102482266E-4]:1.15501399618E1,(11[&rate=4.910133617282512E-4]:2.023830402893E1,29[&rate=4.6243386396627227E-4]:2.023830402893E1)[&rate=7.271051455539042E-4]:5.003013744729E1)[&rate=7.271051455539042E-4]:1.61249695507E0,(19[&rate=7.40156578254458E-4]:1.851221418041E1,18[&rate=9.594886893184676E-4]:1.851221418041E1)[&rate=4.720591972723551E-4]:5.336872425088E1)[&rate=3.169604142142069E-4]:5.022979306112E0,((10[&rate=5.376959500675665E-4]:2.935536322244E1,31[&rate=5.283643437170131E-4]:2.935536322244E1)[&rate=4.2220425430106363E-4]:4.636381929525E1,23[&rate=6.903847161940193E-4]:7.571918251769E1)[&rate=9.336141648540832E-4]:1.184735219707E0)[&rate=6.047437555840573E-4]:2.603323433441E0)[&rate=9.336141648540832E-4]:1.474788846355E0,(17[&rate=0.0010985233305090317]:7.075045125209E1,(27[&rate=3.3435489560117225E-4]:2.761212630369E1,28[&rate=0.0010985233305090317]:2.761212630369E1)[&rate=6.903847161940193E-4]:4.313832494839E1)[&rate=6.903847161940193E-4]:1.023157876511E1)[&rate=0.0014250307851622016]:4.85092835321E1); +tree STATE_420000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55116.83593303072,EEF_ucld_branchRates=-266.168517335019,lnP=-55116.83593303072,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.092973682369778E-4]:8.060782556834E0,9[&rate=7.746037149730546E-4]:8.060782556834E0)[&rate=3.975961699859585E-4]:5.975547478469E0,15[&rate=3.471559500473038E-4]:1.40363300353E1)[&rate=7.58403926511482E-4]:1.093602848342E2,(14[&rate=0.0012382428516624457]:4.564762184079E1,24[&rate=9.356645972038236E-4]:4.564762184079E1)[&rate=8.885196553705472E-4]:7.774899302874E1)[&rate=0.0011819441057802735]:1.971552740725E0,(((25[&rate=9.356645972038236E-4]:7.369126973327E1,(((((30[&rate=0.0010206639781805708]:5.007787415428E1,26[&rate=6.092973682369778E-4]:5.007787415428E1)[&rate=0.0012382428516624457]:7.632897190483E0,32[&rate=3.3302028591274796E-4]:5.771077134476E1)[&rate=5.189996389527853E-4]:1.006323172806E1,((((3[&rate=0.001054356109355308]:2.132783765295E0,4[&rate=6.092973682369778E-4]:2.132783765295E0)[&rate=5.519559364761127E-4]:3.814566800219E-1,2[&rate=3.975961699859585E-4]:2.514240445317E0)[&rate=6.335289800348366E-4]:8.019468491628E0,5[&rate=7.427930639598946E-4]:1.053370893694E1)[&rate=7.277152319532177E-4]:2.426887062449E0,((7[&rate=5.299071614124362E-4]:5.847478572219E0,6[&rate=7.131209903326558E-4]:5.847478572219E0)[&rate=7.131209903326558E-4]:1.549898373348E0,1[&rate=2.610905941049231E-4]:7.397376945567E0)[&rate=5.408865264278786E-4]:5.563219053826E0)[&rate=5.519559364761127E-4]:5.481340707343E1)[&rate=6.092973682369778E-4]:1.854217695752E0,(16[&rate=4.3190959316801987E-4]:3.16113296044E1,((22[&rate=4.2067570496534485E-4]:3.455921100593E0,21[&rate=9.113281350217953E-4]:3.455921100593E0)[&rate=7.746037149730546E-4]:3.690028761101E0,20[&rate=5.189996389527853E-4]:7.145949861694E0)[&rate=0.0011819441057802735]:2.44653797427E1)[&rate=0.0010206639781805708]:3.801689116418E1)[&rate=7.914560664644368E-4]:2.45381521705E0,12[&rate=7.427930639598946E-4]:7.208203598562E1)[&rate=0.0011819441057802735]:1.609233747644E0)[&rate=5.408865264278786E-4]:1.627948480364E0,((((11[&rate=4.539724453475416E-4]:1.87559331393E1,29[&rate=4.0925415404191666E-4]:1.87559331393E1)[&rate=8.670380065435516E-4]:4.864881124928E1,(33[&rate=7.131209903326558E-4]:5.899435075797E1,13[&rate=3.1787897140805405E-4]:5.899435075797E1)[&rate=4.8652019500267926E-4]:8.410393630618E0)[&rate=4.8652019500267926E-4]:1.311637410054E0,(19[&rate=6.852117437285137E-4]:1.610548758616E1,18[&rate=8.090339683384907E-4]:1.610548758616E1)[&rate=3.471559500473038E-4]:5.261089421248E1)[&rate=4.6486718363570207E-4]:3.728684058641E0,((10[&rate=5.189996389527853E-4]:2.72822168682E1,31[&rate=4.757082395003772E-4]:2.72822168682E1)[&rate=4.2067570496534485E-4]:4.38935302171E1,23[&rate=4.429967999702637E-4]:7.117574708531E1)[&rate=5.858866613893266E-4]:1.269318771976E0)[&rate=3.471559500473038E-4]:2.874152356349E0)[&rate=0.0013061357198836498]:2.295341078296E0,(17[&rate=0.0010917517960460775]:6.218671739863E1,(27[&rate=2.828227820082491E-4]:2.495792006173E1,28[&rate=0.0011819441057802735]:2.495792006173E1)[&rate=8.090339683384907E-4]:3.72287973369E1)[&rate=5.974999678977391E-4]:1.54278418933E1)[&rate=0.0015075662353491576]:4.775360831832E1); +tree STATE_430000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55143.62707319326,EEF_ucld_branchRates=-266.168517335019,lnP=-55143.62707319326,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.36898841972078E-4]:1.152562175907E1,9[&rate=6.171601789310594E-4]:1.152562175907E1)[&rate=4.1027688178626765E-4]:4.623137911131E0,15[&rate=4.910918773569259E-4]:1.61487596702E1)[&rate=9.67494161036723E-4]:1.061346939647E2,(14[&rate=8.362634715076573E-4]:4.916517676638E1,24[&rate=9.945609858323656E-4]:4.916517676638E1)[&rate=9.422701324698098E-4]:7.31182768685E1)[&rate=5.700089309541901E-4]:5.582807281296E0,(((25[&rate=8.005907206930626E-4]:7.211512458695E1,(((((((4[&rate=5.700089309541901E-4]:2.290688867676E0,3[&rate=5.022806034761005E-4]:2.290688867676E0)[&rate=5.358954207814464E-4]:1.950790084557E-1,2[&rate=2.691454807060742E-4]:2.485767876132E0)[&rate=7.36898841972078E-4]:7.214283601943E0,5[&rate=5.585502735964078E-4]:9.700051478075E0)[&rate=3.7194303055304275E-4]:2.662593034756E0,((7[&rate=6.171601789310594E-4]:4.902960285206E0,1[&rate=0.001090536317134817]:4.902960285206E0)[&rate=0.0011729288577020365]:5.583754379264E-1,6[&rate=0.0012812280776135524]:5.461335723133E0)[&rate=2.916041564078975E-4]:6.901308789698E0)[&rate=4.798736505049922E-4]:5.538467892393E1,((30[&rate=4.5724430401609327E-4]:4.602847285445E1,26[&rate=8.553163684859734E-4]:4.602847285445E1)[&rate=0.0013516512239710274]:8.636429119951E0,32[&rate=5.022806034761005E-4]:5.46649019744E1)[&rate=7.520163197295161E-4]:1.308242146236E1)[&rate=5.358954207814464E-4]:1.437886364054E0,(16[&rate=7.079910704497938E-4]:3.044461099312E1,((22[&rate=0.001222838170401524]:3.498120912697E0,21[&rate=4.3415137584271326E-4]:3.498120912697E0)[&rate=0.001222838170401524]:3.655726504628E0,20[&rate=3.434951012331937E-4]:7.153847417325E0)[&rate=0.001222838170401524]:2.329076357579E1)[&rate=8.180507633974024E-4]:3.874059880769E1)[&rate=0.001090536317134817]:1.910247468122E0,12[&rate=9.945609858323656E-4]:7.109545726893E1)[&rate=0.0015606389527030437]:1.01966731802E0)[&rate=4.6860050708666195E-4]:2.65339879787E0,((((11[&rate=4.2233601269041024E-4]:2.230994849511E1,29[&rate=5.700089309541901E-4]:2.230994849511E1)[&rate=7.83807632693299E-4]:4.320178864522E1,(33[&rate=7.520163197295161E-4]:5.812818043134E1,13[&rate=5.358954207814464E-4]:5.812818043134E1)[&rate=6.293753374725116E-4]:7.383556708998E0)[&rate=3.278408649272344E-4]:1.761786534665E0,(19[&rate=0.001222838170401524]:1.658559221799E1,18[&rate=9.186312818871136E-4]:1.658559221799E1)[&rate=5.471853843872274E-4]:5.0687931457E1)[&rate=8.005907206930626E-4]:4.10352458154E0,((10[&rate=7.83807632693299E-4]:2.530473825786E1,31[&rate=4.1027688178626765E-4]:2.530473825786E1)[&rate=3.5811116622777215E-4]:4.525064097248E1,23[&rate=6.051361993084924E-4]:7.055537923034E1)[&rate=3.5811116622777215E-4]:8.216690262E-1)[&rate=6.418032656418848E-4]:3.391475128285E0)[&rate=4.3415137584271326E-4]:4.078788239374E0,(17[&rate=7.36898841972078E-4]:6.712510113756E1,(27[&rate=4.5724430401609327E-4]:2.775594011772E1,28[&rate=0.0013516512239710274]:2.775594011772E1)[&rate=6.418032656418848E-4]:3.936916101985E1)[&rate=6.544667869737193E-4]:1.172221048663E1)[&rate=0.0010556056417642258]:4.901894929198E1); +tree STATE_440000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55163.0566640687,EEF_ucld_branchRates=-266.168517335019,lnP=-55163.0566640687,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.1364723603169415E-4]:1.139275051607E1,9[&rate=9.566030618547037E-4]:1.139275051607E1)[&rate=0.001179895957335951]:5.770316930091E0,15[&rate=7.600447801799036E-4]:1.716306744616E1)[&rate=7.600447801799036E-4]:9.998323456184E1,(14[&rate=0.0010863511466338925]:4.556629493498E1,24[&rate=5.427571526525709E-4]:4.556629493498E1)[&rate=8.447739525803825E-4]:7.158000707302E1)[&rate=9.843765523338056E-4]:1.048963900992E1,(((25[&rate=5.958509910204192E-4]:7.379309342242E1,(((((((4[&rate=4.709076597878086E-4]:2.27614325239E0,3[&rate=4.5010550650226045E-4]:2.27614325239E0)[&rate=6.410932246475564E-4]:4.778355151014E-1,2[&rate=6.06874422558011E-4]:2.753978767491E0)[&rate=7.307430271771541E-4]:7.519866274543E0,5[&rate=4.914429087496312E-4]:1.027384504203E1)[&rate=4.28808375615975E-4]:2.345039173513E0,((7[&rate=4.605528843845581E-4]:4.956261775547E0,6[&rate=7.916750320067183E-4]:4.956261775547E0)[&rate=4.0671318755713216E-4]:1.055102830929E0,1[&rate=5.849862932988999E-4]:6.011364606476E0)[&rate=5.958509910204192E-4]:6.607519609071E0)[&rate=4.0671318755713216E-4]:5.343760310762E1,((30[&rate=4.811963801543272E-4]:4.987166346244E1,26[&rate=4.5010550650226045E-4]:4.987166346244E1)[&rate=5.531646171567982E-4]:7.467485177969E0,32[&rate=5.427571526525709E-4]:5.733914864041E1)[&rate=6.902435589957447E-4]:8.71733868276E0)[&rate=2.955274522310136E-4]:2.016474447442E0,(16[&rate=7.033405037971843E-4]:3.050821524462E1,((22[&rate=0.0010863511466338925]:2.306551497058E0,21[&rate=0.0011295274001409004]:2.306551497058E0)[&rate=5.22139631897917E-4]:3.512340078137E0,20[&rate=9.566030618547037E-4]:5.818891575195E0)[&rate=0.0012404479804646658]:2.468932366942E1)[&rate=0.0011295274001409004]:3.7564746526E1)[&rate=9.073122229829523E-4]:3.555650802717E0,12[&rate=7.451322534158915E-4]:7.162861257333E1)[&rate=5.22139631897917E-4]:2.16448084909E0)[&rate=5.11894944429126E-4]:2.549270657262E0,((((11[&rate=3.5813749699567065E-4]:1.995259363422E1,29[&rate=5.427571526525709E-4]:1.995259363422E1)[&rate=7.916750320067183E-4]:4.866439766908E1,(33[&rate=9.310319952346989E-4]:6.222068451571E1,13[&rate=4.811963801543272E-4]:6.222068451571E1)[&rate=6.902435589957447E-4]:6.396306787589E0)[&rate=7.168271824929513E-4]:2.876559740585E0,(19[&rate=7.033405037971843E-4]:2.087112262279E1,18[&rate=7.755373666205899E-4]:2.087112262279E1)[&rate=3.5813749699567065E-4]:5.062242842109E1)[&rate=2.955274522310136E-4]:2.055901317466E0,((10[&rate=0.0011295274001409004]:2.028510020361E1,31[&rate=5.958509910204192E-4]:2.028510020361E1)[&rate=3.5813749699567065E-4]:5.301457426645E1,23[&rate=5.531646171567982E-4]:7.329967447006E1)[&rate=3.5813749699567065E-4]:2.497778912887E-1)[&rate=8.085328497048552E-4]:2.792911718337E0)[&rate=4.28808375615975E-4]:4.641397857471E0,(17[&rate=9.843765523338056E-4]:7.098929436644E1,(27[&rate=4.0671318755713216E-4]:2.853869573289E1,28[&rate=0.0011295274001409004]:2.853869573289E1)[&rate=8.851687102101727E-4]:4.245059863355E1)[&rate=6.180756706886097E-4]:9.99446757071E0)[&rate=0.0014189825699494466]:4.665217908076E1); +tree STATE_450000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55148.2659992959,EEF_ucld_branchRates=-266.168517335019,lnP=-55148.2659992959,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.232987831266526E-4]:1.033133938134E1,9[&rate=4.561232637733917E-4]:1.033133938134E1)[&rate=5.220746363554043E-4]:6.537715642796E0,15[&rate=4.561232637733917E-4]:1.686905502414E1)[&rate=0.0011417060849588118]:9.756420745765E1,(14[&rate=0.001300581201359919]:4.901029193218E1,24[&rate=0.001087664894161743]:4.901029193218E1)[&rate=9.398774866051818E-4]:6.542297054961E1)[&rate=8.045590579336359E-4]:1.397444675164E1,(((25[&rate=4.7491367418955963E-4]:7.547282011305E1,((((((4[&rate=2.644821601466702E-4]:2.034469200971E0,3[&rate=7.102774940841396E-4]:2.034469200971E0)[&rate=4.655308748747296E-4]:8.29116308815E-1,2[&rate=4.371508577483717E-4]:2.863585509786E0)[&rate=6.711099521424253E-4]:8.405843686242E0,5[&rate=5.711182213613161E-4]:1.126942919603E1)[&rate=5.125546484353467E-4]:1.931050426631E0,((7[&rate=4.655308748747296E-4]:5.461193777167E0,6[&rate=8.875961849584659E-4]:5.461193777167E0)[&rate=0.001004007070407935]:8.114450766337E-1,1[&rate=6.58872317535183E-4]:6.2726388538E0)[&rate=3.875416900286917E-4]:6.927840768858E0)[&rate=5.813289144783928E-4]:5.513674978097E1,((30[&rate=8.875961849584659E-4]:5.062133134173E1,26[&rate=4.275391870738175E-4]:5.062133134173E1)[&rate=7.102774940841396E-4]:8.831864313787E0,32[&rate=5.125546484353467E-4]:5.945319565552E1)[&rate=3.4260767251575373E-4]:8.884033748103E0)[&rate=3.5457847413339236E-4]:4.998310994841E0,((16[&rate=3.4260767251575373E-4]:3.639132245012E1,((22[&rate=5.610638990091058E-4]:3.299924617762E0,21[&rate=0.0010426466309727423]:3.299924617762E0)[&rate=0.0010426466309727423]:2.752428018233E0,20[&rate=6.022930327138082E-4]:6.052352635995E0)[&rate=0.0010426466309727423]:3.033896981412E1)[&rate=0.001087664894161743]:3.624433235831E1,12[&rate=7.86869153942783E-4]:7.263565480843E1)[&rate=5.511486963178487E-4]:6.998855900375E-1)[&rate=3.9785040202458105E-4]:2.137279714581E0)[&rate=6.967704947150089E-4]:1.596359032604E0,((((33[&rate=7.541394024416991E-4]:6.300959795757E1,13[&rate=4.1780764484490525E-4]:6.300959795757E1)[&rate=4.079239872053228E-4]:6.11190316598E0,(11[&rate=3.9785040202458105E-4]:1.872580103196E1,29[&rate=9.125539375635331E-4]:1.872580103196E1)[&rate=9.125539375635331E-4]:5.039570009159E1)[&rate=5.125546484353467E-4]:9.06139995389E-1,(19[&rate=6.967704947150089E-4]:1.673277014699E1,18[&rate=6.967704947150089E-4]:1.673277014699E1)[&rate=3.5457847413339236E-4]:5.329487097195E1)[&rate=5.220746363554043E-4]:5.196403086476E0,((10[&rate=7.541394024416991E-4]:2.371432695254E1,31[&rate=5.030944577033942E-4]:2.371432695254E1)[&rate=3.0128640822145794E-4]:5.058492138774E1,23[&rate=5.125546484353467E-4]:7.429924834028E1)[&rate=4.275391870738175E-4]:9.247958651345E-1)[&rate=6.711099521424253E-4]:1.845134940235E0)[&rate=2.8440633626505027E-4]:4.539229512897E0,(17[&rate=6.58872317535183E-4]:6.787753015151E1,(27[&rate=5.511486963178487E-4]:2.908377512096E1,28[&rate=6.469813398116507E-4]:2.908377512096E1)[&rate=7.38899489049755E-4]:3.879375503055E1)[&rate=5.511486963178487E-4]:1.373087850703E1)[&rate=9.701111338541598E-4]:4.679930057488E1); +tree STATE_460000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.15121103917,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.15121103917,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=9.58320052652337E-4]:9.917370284434E0,9[&rate=7.558683366650591E-4]:9.917370284434E0)[&rate=9.58320052652337E-4]:6.72168933197E0,15[&rate=4.873653727424797E-4]:1.66390596164E1)[&rate=7.376655003082962E-4]:1.01277871078E2,(14[&rate=8.424119681895423E-4]:5.228585992065E1,24[&rate=6.642633423202576E-4]:5.228585992065E1)[&rate=9.821210392412637E-4]:6.563107077372E1)[&rate=0.0010094648402290407]:1.110432101748E1,(((25[&rate=6.642633423202576E-4]:7.113215284788E1,(12[&rate=6.191788556231445E-4]:6.962133811125E1,((16[&rate=6.490804900764528E-4]:3.41592432395E1,((22[&rate=7.653553083664821E-4]:3.172697907715E0,21[&rate=7.288987895480033E-4]:3.172697907715E0)[&rate=7.46647349648209E-4]:3.36560197249E0,20[&rate=9.006673209293741E-4]:6.538299880205E0)[&rate=7.957363839002796E-4]:2.76209433593E1)[&rate=0.0010094648402290407]:3.301070367194E1,(((((4[&rate=5.25220665690973E-4]:1.945900460226E0,2[&rate=6.117303979298478E-4]:1.945900460226E0)[&rate=7.957363839002796E-4]:7.554255346163E-1,3[&rate=5.816561298068775E-4]:2.701325994842E0)[&rate=8.299049645692953E-4]:8.507007256796E0,5[&rate=4.028508951875334E-4]:1.120833325164E1)[&rate=6.490804900764528E-4]:1.984556720945E0,((7[&rate=0.0010094648402290407]:6.537688929881E0,6[&rate=6.191788556231445E-4]:6.537688929881E0)[&rate=9.821210392412637E-4]:1.537404003135E0,1[&rate=5.503604627194969E-4]:8.075092933016E0)[&rate=6.26625927855907E-4]:5.117797039567E0)[&rate=6.566426944566703E-4]:5.361291285682E1,((30[&rate=6.26625927855907E-4]:4.951386470312E1,26[&rate=7.20325598827176E-4]:4.951386470312E1)[&rate=7.20325598827176E-4]:7.707525540454E0,32[&rate=5.816561298068775E-4]:5.722139024358E1)[&rate=6.26625927855907E-4]:9.584412585824E0)[&rate=6.117303979298478E-4]:3.64144082039E-1)[&rate=9.371754865212938E-4]:2.451391199807E0)[&rate=6.875991059782978E-4]:1.510814736627E0)[&rate=5.421894483469605E-4]:4.383456773311E0,((((33[&rate=8.424119681895423E-4]:6.180551545639E1,13[&rate=5.816561298068775E-4]:6.180551545639E1)[&rate=9.821210392412637E-4]:3.596909227983E0,(11[&rate=5.338221630926207E-4]:1.829723166437E1,29[&rate=8.066360434131789E-4]:1.829723166437E1)[&rate=8.845871807936935E-4]:4.710519302001E1)[&rate=7.20325598827176E-4]:1.961616100934E0,(19[&rate=5.816561298068775E-4]:1.700360525548E1,18[&rate=5.163390225751973E-4]:1.700360525548E1)[&rate=5.892454840549115E-4]:5.036043552983E1)[&rate=5.421894483469605E-4]:5.272422970832E0,((10[&rate=7.558683366650591E-4]:2.041193952244E1,31[&rate=7.558683366650591E-4]:2.041193952244E1)[&rate=4.974935574478111E-4]:5.21590529451E1,23[&rate=4.223145514822773E-4]:7.257099246755E1)[&rate=4.7661204526549275E-4]:6.547128859509E-2)[&rate=5.421894483469605E-4]:2.879145865047E0)[&rate=5.25220665690973E-4]:3.06952148295E0,(17[&rate=6.490804900764528E-4]:7.076440290082E1,(27[&rate=4.7661204526549275E-4]:3.301381885508E1,28[&rate=9.006673209293741E-4]:3.301381885508E1)[&rate=9.006673209293741E-4]:3.775058404574E1)[&rate=4.223145514822773E-4]:7.820728203313E0)[&rate=0.0012115062208570117]:5.043612060771E1); +tree STATE_470000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55121.01874586179,EEF_ucld_branchRates=-266.168517335019,lnP=-55121.01874586179,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.903921839701618E-4]:8.794964528107E0,9[&rate=6.018189412430174E-4]:8.794964528107E0)[&rate=7.272041928845306E-4]:8.015520410645E0,15[&rate=6.133842058486565E-4]:1.681048493875E1)[&rate=8.55712449182472E-4]:9.74437531749E1,(14[&rate=0.0014130030090554655]:4.828728193551E1,24[&rate=0.0012069906838180118]:4.828728193551E1)[&rate=9.893666408741619E-4]:6.596695617814E1)[&rate=0.0010477314646046118]:1.413439249033E1,(((25[&rate=7.414032299773464E-4]:7.26588154657E1,(12[&rate=9.392638347537495E-4]:7.071109662228E1,((16[&rate=5.456996031230003E-4]:3.503167591089E1,((22[&rate=7.560327467222488E-4]:2.558518137187E0,21[&rate=2.812953196198735E-4]:2.558518137187E0)[&rate=7.272041928845306E-4]:3.611411690594E0,20[&rate=0.0010173325295676926]:6.169929827781E0)[&rate=0.0010173325295676926]:2.886174608311E1)[&rate=0.0011595525782494823]:3.517325790637E1,(((((4[&rate=0.001262396873947904]:2.034029564897E0,2[&rate=5.346877750942418E-4]:2.034029564897E0)[&rate=7.711360973744372E-4]:3.930551010657E-1,3[&rate=8.95196764909033E-4]:2.427084665963E0)[&rate=4.570980546077529E-4]:9.525534571891E0,5[&rate=3.7025977060695526E-4]:1.195261923785E1)[&rate=8.029651913281241E-4]:5.431875146376E-1,((7[&rate=3.038462543093595E-4]:6.336108954873E0,6[&rate=4.4562543690467124E-4]:6.336108954873E0)[&rate=5.678797294042159E-4]:1.389775907585E0,1[&rate=5.678797294042159E-4]:7.725884862458E0)[&rate=8.749524931669743E-4]:4.769921890034E0)[&rate=7.560327467222488E-4]:5.507744832267E1,((30[&rate=7.711360973744372E-4]:4.876305654613E1,26[&rate=5.790852457474122E-4]:4.876305654613E1)[&rate=8.749524931669743E-4]:8.791987850943E0,32[&rate=6.491065126259092E-4]:5.755504439708E1)[&rate=6.133842058486565E-4]:1.001821067808E1)[&rate=4.570980546077529E-4]:2.63167874211E0)[&rate=0.0011595525782494823]:5.061628050114E-1)[&rate=6.73988232656751E-4]:1.947718843423E0)[&rate=3.7025977060695526E-4]:2.793316101671E0,((((33[&rate=6.251071569200575E-4]:6.180289045846E1,13[&rate=4.6841049704828913E-4]:6.180289045846E1)[&rate=0.0012069906838180118]:7.111873652276E0,(11[&rate=4.6841049704828913E-4]:1.993705920974E1,29[&rate=4.3395001801355886E-4]:1.993705920974E1)[&rate=0.001118030890462913]:4.897770490099E1)[&rate=3.557075273118607E-4]:1.773553403919E0,(19[&rate=7.414032299773464E-4]:1.840838319713E1,18[&rate=9.634451628514214E-4]:1.840838319713E1)[&rate=4.0977644189713974E-4]:5.227993431752E1)[&rate=3.840105629385547E-4]:3.028160781328E0,((10[&rate=5.017289067601322E-4]:2.254128542759E1,31[&rate=7.86761927573887E-4]:2.254128542759E1)[&rate=3.038462543093595E-4]:4.971029190026E1,23[&rate=5.127233365941207E-4]:7.225157732785E1)[&rate=5.346877750942418E-4]:1.464900968134E0)[&rate=4.3395001801355886E-4]:1.73565327139E0)[&rate=5.237024496215998E-4]:5.626552132674E0,(17[&rate=6.251071569200575E-4]:7.242391153769E1,(27[&rate=5.790852457474122E-4]:2.933009619198E1,28[&rate=0.001262396873947904]:2.933009619198E1)[&rate=5.346877750942418E-4]:4.309381534571E1)[&rate=0.0012069906838180118]:8.654772162358E0)[&rate=0.001700966010148869]:4.730994690394E1); +tree STATE_480000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.28389994129,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.28389994129,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.416476800587375E-4]:9.175323198727E0,9[&rate=8.81637392631126E-4]:9.175323198727E0)[&rate=4.0365211433400933E-4]:1.016577951852E1,15[&rate=5.077521290574157E-4]:1.934110271725E1)[&rate=8.373762222087815E-4]:9.499505912713E1,(14[&rate=8.81637392631126E-4]:4.850668284874E1,24[&rate=8.81637392631126E-4]:4.850668284874E1)[&rate=0.0012942590695965192]:6.582947899564E1)[&rate=8.81637392631126E-4]:1.128709406523E1,(((25[&rate=7.484815606260926E-4]:7.697126489694E1,(12[&rate=5.971193189975581E-4]:7.571923713066E1,(((((4[&rate=4.421886462773825E-4]:1.63008556966E0,2[&rate=4.796199521178602E-4]:1.63008556966E0)[&rate=6.912762699321468E-4]:5.165068757513E-1,3[&rate=5.461778958701347E-4]:2.146592445411E0)[&rate=6.782756141985345E-4]:8.58407808428E0,5[&rate=6.912762699321468E-4]:1.073067052969E1)[&rate=9.97866307560264E-4]:1.897360537072E0,((7[&rate=4.134805400171214E-4]:6.280732818189E0,6[&rate=9.640162128342961E-4]:6.280732818189E0)[&rate=4.796199521178602E-4]:8.507618252859E-1,1[&rate=5.364266729118907E-4]:7.131494643475E0)[&rate=0.0010814344717814683]:5.496536423288E0)[&rate=5.461778958701347E-4]:6.128764183495E1,((16[&rate=4.702888738231305E-4]:3.95592343966E1,((22[&rate=9.97866307560264E-4]:3.352465394304E0,21[&rate=2.809333851935818E-4]:3.352465394304E0)[&rate=5.762357168141795E-4]:3.427888930574E0,20[&rate=6.416476800587375E-4]:6.780354324878E0)[&rate=0.0010364604000061603]:3.277888007172E1)[&rate=9.640162128342961E-4]:3.183890385105E1,((30[&rate=5.172293356021262E-4]:4.959345258508E1,26[&rate=4.889632369714898E-4]:4.959345258508E1)[&rate=7.811275860355237E-4]:1.184970378039E1,32[&rate=5.461778958701347E-4]:6.144315636546E1)[&rate=4.0365211433400933E-4]:9.954981882192E0)[&rate=0.0010814344717814683]:2.517534654056E0)[&rate=6.656962388618138E-4]:1.803564228948E0)[&rate=2.3570418262024737E-4]:1.25202776628E0)[&rate=5.461778958701347E-4]:2.144535010103E0,((((33[&rate=6.534986693941309E-4]:6.079857044699E1,13[&rate=3.5062551655000006E-4]:6.079857044699E1)[&rate=5.077521290574157E-4]:9.335333817692E0,(11[&rate=4.702888738231305E-4]:1.962193731175E1,29[&rate=8.17471803083172E-4]:1.962193731175E1)[&rate=7.643992794323553E-4]:5.051196695293E1)[&rate=6.656962388618138E-4]:2.018167810186E0,(19[&rate=7.643992794323553E-4]:1.595338176752E1,18[&rate=4.2315880846370514E-4]:1.595338176752E1)[&rate=3.2611827966180914E-4]:5.619869030735E1)[&rate=4.134805400171214E-4]:2.005866322007E0,((10[&rate=4.134805400171214E-4]:3.095103480164E1,31[&rate=5.267823652953253E-4]:3.095103480164E1)[&rate=2.6115998761590514E-4]:4.136199240674E1,23[&rate=3.7285159596457267E-4]:7.231302720837E1)[&rate=5.267823652953253E-4]:1.844911188503E0)[&rate=3.3873143128162645E-4]:4.957861510164E0)[&rate=3.2611827966180914E-4]:3.274385065651E0,(17[&rate=6.912762699321468E-4]:6.912099630025E1,(27[&rate=3.833874168821938E-4]:2.362461372805E1,28[&rate=0.0012031630998739756]:2.362461372805E1)[&rate=4.6095258627151326E-4]:4.549638257219E1)[&rate=6.534986693941309E-4]:1.326918867245E1)[&rate=0.0010814344717814683]:4.323307093691E1); +tree STATE_490000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55115.42485201572,EEF_ucld_branchRates=-266.168517335019,lnP=-55115.42485201572,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.993661700597225E-4]:1.007237490713E1,9[&rate=0.0011188144912762257]:1.007237490713E1)[&rate=9.717241410544799E-4]:6.563464890359E0,15[&rate=4.967616250179016E-4]:1.663583979749E1)[&rate=9.717241410544799E-4]:9.215411539525E1,(14[&rate=9.717241410544799E-4]:4.697928604194E1,24[&rate=9.717241410544799E-4]:4.697928604194E1)[&rate=0.0013843289170831215]:6.18106691508E1)[&rate=0.0012260635146358425]:1.560579065004E1,(((25[&rate=7.367249827358808E-4]:7.521115305144E1,(12[&rate=8.916418118869521E-4]:7.411825889759E1,((16[&rate=6.629959444581603E-4]:4.253811349395E1,((22[&rate=0.0012260635146358425]:3.080162127314E0,21[&rate=4.4304149761560885E-4]:3.080162127314E0)[&rate=0.001295983447611698]:4.404039927107E0,20[&rate=7.367249827358808E-4]:7.484202054421E0)[&rate=0.0011188144912762257]:3.505391143953E1)[&rate=0.0011681968364556275]:2.989296314995E1,(((((4[&rate=3.1328341953531965E-4]:1.873756929599E0,3[&rate=8.260551248241984E-4]:1.873756929599E0)[&rate=0.0011188144912762257]:2.923446797146E-1,2[&rate=2.432971043280034E-4]:2.166101609314E0)[&rate=5.407226102728706E-4]:9.814089484141E0,5[&rate=4.104525996158224E-4]:1.198019109345E1)[&rate=4.104525996158224E-4]:8.363485665157E-1,((7[&rate=5.185452834122342E-4]:6.969833430291E0,6[&rate=7.057757756601106E-4]:6.969833430291E0)[&rate=6.91075365115733E-4]:8.556607301392E-1,1[&rate=8.466619727355138E-4]:7.825494160431E0)[&rate=5.407226102728706E-4]:4.991045499539E0)[&rate=7.057757756601106E-4]:5.90107076166E1,((30[&rate=7.367249827358808E-4]:5.096867388117E1,26[&rate=5.634398566772426E-4]:5.096867388117E1)[&rate=6.236294947204623E-4]:1.076414590119E1,32[&rate=4.7522509091727053E-4]:6.173281978235E1)[&rate=3.402159907216902E-4]:1.009442749422E1)[&rate=3.402159907216902E-4]:6.03829367325E-1)[&rate=7.530821232168362E-4]:1.687182253689E0)[&rate=1.7332238973008653E-4]:1.092894153849E0)[&rate=7.209753716797267E-4]:7.263118055109E-1,((((33[&rate=0.0012260635146358425]:6.218100664367E1,13[&rate=4.6450180383505085E-4]:6.218100664367E1)[&rate=4.6450180383505085E-4]:4.858664704269E0,(11[&rate=3.402159907216902E-4]:2.087923224457E1,29[&rate=4.7522509091727053E-4]:2.087923224457E1)[&rate=7.057757756601106E-4]:4.616043910337E1)[&rate=3.766261268532619E-4]:3.027726483484E0,(19[&rate=4.859718327290386E-4]:2.221025571468E1,18[&rate=5.750481989328416E-4]:2.221025571468E1)[&rate=5.634398566772426E-4]:4.785714211674E1)[&rate=2.643712018862542E-4]:3.908415532634E0,((10[&rate=5.634398566772426E-4]:2.617195892873E1,31[&rate=8.260551248241984E-4]:2.617195892873E1)[&rate=4.32258340873292E-4]:4.552112921E1,23[&rate=5.52004431813319E-4]:7.169308813873E1)[&rate=3.648682869456277E-4]:2.282725225325E0)[&rate=4.104525996158224E-4]:1.961651492891E0)[&rate=5.295756701642406E-4]:4.405560058427E0,(17[&rate=9.163938436759233E-4]:6.762383179613E1,(27[&rate=5.076133166137283E-4]:2.316998328212E1,28[&rate=0.0010374611939101218]:2.316998328212E1)[&rate=5.634398566772426E-4]:4.4453848514E1)[&rate=3.993661700597225E-4]:1.271919311925E1)[&rate=8.065045693848432E-4]:4.40527209274E1); +tree STATE_500000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.18176665891,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.18176665891,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.298321747805971E-4]:8.926077141994E0,9[&rate=5.098014800557814E-4]:8.926077141994E0)[&rate=5.797546726975919E-4]:5.895421121031E0,15[&rate=9.311345773501672E-4]:1.482149826303E1)[&rate=9.071435278373359E-4]:9.214611236725E1,(14[&rate=8.64053173799864E-4]:4.471062663548E1,24[&rate=8.085272099171182E-4]:4.471062663548E1)[&rate=0.001017182023589903]:6.22569839948E1)[&rate=3.4804974253268374E-4]:2.045836796218E1,(((25[&rate=7.051510156315295E-4]:7.427936923258E1,(12[&rate=7.319567352429002E-4]:7.277747181185E1,((16[&rate=2.524159873691496E-4]:4.342237738975E1,((22[&rate=7.607097920610128E-4]:3.106947671448E0,21[&rate=4.1927726809892464E-4]:3.106947671448E0)[&rate=0.0010525167703305186]:4.927158194689E0,20[&rate=5.593795164657857E-4]:8.034105866138E0)[&rate=0.001361412288337391]:3.538827152362E1)[&rate=0.001139697078932122]:2.44355030499E1,(((30[&rate=7.051510156315295E-4]:4.913604600899E1,26[&rate=4.5038037338634274E-4]:4.913604600899E1)[&rate=0.0010927882243427966]:9.438845907125E0,32[&rate=4.1927726809892464E-4]:5.857489191612E1)[&rate=5.593795164657857E-4]:7.741087268014E0,((((4[&rate=4.401866362606015E-4]:1.880209648595E0,3[&rate=0.0011959932240387123]:1.880209648595E0)[&rate=9.311345773501672E-4]:2.578154192803E-1,2[&rate=5.593795164657857E-4]:2.138025067875E0)[&rate=5.797546726975919E-4]:7.513253980305E0,5[&rate=2.524159873691496E-4]:9.65127904818E0)[&rate=5.797546726975919E-4]:1.834923137826E0,((7[&rate=4.901640783806549E-4]:6.863125372139E0,6[&rate=0.0012665618454707698]:6.863125372139E0)[&rate=5.294812868548803E-4]:2.013059013777E0,1[&rate=3.7391995857626606E-4]:8.876184385916E0)[&rate=5.294812868548803E-4]:2.61001780009E0)[&rate=5.493411006228633E-4]:5.482977699812E1)[&rate=4.704166482711794E-4]:1.541901255528E0)[&rate=0.001139697078932122]:4.919591372196E0)[&rate=3.002969507453368E-4]:1.501897420722E0)[&rate=3.7391995857626606E-4]:2.312443354412E0,((((33[&rate=6.678432116788791E-4]:6.117049563885E1,13[&rate=4.901640783806549E-4]:6.117049563885E1)[&rate=5.098014800557814E-4]:7.474029976301E0,(11[&rate=4.0847442397386636E-4]:2.137613326863E1,29[&rate=7.319567352429002E-4]:2.137613326863E1)[&rate=9.856590963243962E-4]:4.726839234652E1)[&rate=5.493411006228633E-4]:1.300152449606E0,(19[&rate=6.923651984058906E-4]:2.110429992219E1,18[&rate=7.183344710528051E-4]:2.110429992219E1)[&rate=3.7391995857626606E-4]:4.884037814256E1)[&rate=8.085272099171182E-4]:4.517893638592E0,((10[&rate=7.183344710528051E-4]:2.214475326808E1,31[&rate=9.311345773501672E-4]:2.214475326808E1)[&rate=4.901640783806549E-4]:4.955608998721E1,23[&rate=5.695119055999947E-4]:7.170084325529E1)[&rate=4.5038037338634274E-4]:2.761728448056E0)[&rate=8.085272099171182E-4]:2.129240883638E0)[&rate=9.311345773501672E-4]:2.859769623343E0,(17[&rate=8.260330825531068E-4]:6.735196228108E1,(27[&rate=5.797546726975919E-4]:2.312381151146E1,28[&rate=0.001139697078932122]:2.312381151146E1)[&rate=6.22173872862128E-4]:4.422815076962E1)[&rate=4.298321747805971E-4]:1.209961992925E1)[&rate=7.319567352429002E-4]:4.797439638212E1); +tree STATE_510000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55116.849533700675,EEF_ucld_branchRates=-266.168517335019,lnP=-55116.849533700675,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.910427612096587E-4]:9.215349933569E0,9[&rate=5.501216391566024E-4]:9.215349933569E0)[&rate=4.6532647097698507E-4]:4.849910715156E0,15[&rate=5.079163566907611E-4]:1.406526064872E1)[&rate=0.0011822215854517017]:9.902962064568E1,(14[&rate=9.200652144026194E-4]:4.468140251623E1,24[&rate=9.474888742045157E-4]:4.468140251623E1)[&rate=0.001057570010689034]:6.841347877817E1)[&rate=8.731765312462565E-4]:1.461334011222E1,(((25[&rate=5.673128550481002E-4]:7.317889135851E1,(12[&rate=8.337817656036431E-4]:7.190483647735E1,((16[&rate=3.89048828079217E-4]:3.983845827838E1,((22[&rate=6.821539077189937E-4]:2.881326462653E0,21[&rate=5.586814378508679E-4]:2.881326462653E0)[&rate=8.954873241288645E-4]:4.235615029541E0,20[&rate=5.416198104063832E-4]:7.116941492194E0)[&rate=8.527128642422193E-4]:3.272151678619E1)[&rate=9.785875185432515E-4]:2.93413585911E1,(((30[&rate=7.047425992577877E-4]:4.704759672597E1,26[&rate=4.385885551710071E-4]:4.704759672597E1)[&rate=0.0011822215854517017]:8.536288423309E0,32[&rate=4.2930933271327057E-4]:5.558388514928E1)[&rate=6.608884803368227E-4]:1.030513697316E1,((((4[&rate=5.079163566907611E-4]:1.92491595106E0,3[&rate=4.8254398571838673E-4]:1.92491595106E0)[&rate=3.77788386929944E-4]:5.372642353395E-1,2[&rate=4.2930933271327057E-4]:2.462180186399E0)[&rate=5.331623176886331E-4]:8.996231323298E0,5[&rate=3.384648673864899E-4]:1.14584115097E1)[&rate=7.552029391535711E-4]:1.216394710657E0,((7[&rate=2.349627436915301E-4]:6.136898338248E0,6[&rate=5.673128550481002E-4]:6.136898338248E0)[&rate=2.7747174547969165E-4]:1.479416507753E0,1[&rate=6.821539077189937E-4]:7.616314846E0)[&rate=3.89048828079217E-4]:5.058491374353E0)[&rate=4.910427612096587E-4]:5.321421590208E1)[&rate=5.760297040177264E-4]:3.290794747053E0)[&rate=7.417982692021216E-4]:2.725019607864E0)[&rate=0.001014610504494141]:1.274054881165E0)[&rate=5.416198104063832E-4]:4.335138604844E-1,((((33[&rate=6.407055419574229E-4]:5.777635482072E1,13[&rate=6.02836580015016E-4]:5.777635482072E1)[&rate=6.608884803368227E-4]:1.113239736631E1,(11[&rate=4.2930933271327057E-4]:1.64333136058E1,29[&rate=5.247353850346139E-4]:1.64333136058E1)[&rate=4.385885551710071E-4]:5.247543858123E1)[&rate=4.6532647097698507E-4]:9.903250991036E-1,(19[&rate=5.331623176886331E-4]:1.984748372292E1,18[&rate=4.2930933271327057E-4]:1.984748372292E1)[&rate=5.416198104063832E-4]:5.005159356321E1)[&rate=5.673128550481002E-4]:1.583039874778E0,((10[&rate=0.001014610504494141]:2.167228493514E1,31[&rate=7.047425992577877E-4]:2.167228493514E1)[&rate=3.527957692476854E-4]:4.962247949485E1,23[&rate=4.739789464021182E-4]:7.129476442999E1)[&rate=7.996019129241082E-4]:1.873527309251E-1)[&rate=8.731765312462565E-4]:2.130288058087E0)[&rate=7.552029391535711E-4]:2.860329415735E0,(17[&rate=0.001014610504494141]:6.600773409665E1,(27[&rate=6.93265568762115E-4]:2.530216888307E1,28[&rate=7.166252601397205E-4]:2.530216888307E1)[&rate=8.337817656036431E-4]:4.070556521358E1)[&rate=6.713720785286924E-4]:1.046500053808E1)[&rate=7.692454991186107E-4]:5.123548677189E1); +tree STATE_520000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.823604281606,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.823604281606,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.232213473755196E-4]:1.035353679828E1,9[&rate=7.437681029232861E-4]:1.035353679828E1)[&rate=3.131642058071029E-4]:6.048165392619E0,15[&rate=5.232213473755196E-4]:1.64017021909E1)[&rate=9.114692276400761E-4]:9.799074366912E1,(14[&rate=0.0012797017562859775]:4.549009962948E1,24[&rate=0.001215455152438007]:4.549009962948E1)[&rate=0.0012797017562859775]:6.890234623054E1)[&rate=7.613740363777602E-4]:1.373678182809E1,(((25[&rate=6.503714944243865E-4]:7.183972432309E1,(12[&rate=7.10526390199814E-4]:7.027209405956E1,((16[&rate=3.2654791246420186E-4]:3.955336088869E1,((22[&rate=8.625648600184429E-4]:4.587953920268E0,21[&rate=0.0015911777865492743]:4.587953920268E0)[&rate=7.268402115162747E-4]:3.079896582305E0,20[&rate=4.3264887090995835E-4]:7.667850502573E0)[&rate=0.0011607922742710819]:3.188551038611E1)[&rate=0.0011132167035946827]:2.81894904458E1,(((30[&rate=9.989341790439031E-4]:4.702079987503E1,26[&rate=8.40216200991262E-4]:4.702079987503E1)[&rate=8.40216200991262E-4]:9.388127470311E0,32[&rate=5.001354973478715E-4]:5.640892734535E1)[&rate=5.837142657924837E-4]:9.62548372109E0,((((4[&rate=3.7573592875987714E-4]:2.236939827451E0,3[&rate=6.795214344061895E-4]:2.236939827451E0)[&rate=0.0011607922742710819]:6.579318842353E-1,2[&rate=1.5918260357054685E-4]:2.894871711686E0)[&rate=3.8736050409199867E-4]:7.733350821344E0,5[&rate=5.349626549996772E-4]:1.062822253303E1)[&rate=5.349626549996772E-4]:2.334880805426E0,((7[&rate=2.0174303554877063E-4]:6.496224529979E0,6[&rate=2.67766647113527E-4]:6.496224529979E0)[&rate=4.3264887090995835E-4]:1.351624366122E0,1[&rate=5.11618703672492E-4]:7.847848896101E0)[&rate=4.55010874229066E-4]:5.115254442355E0)[&rate=5.11618703672492E-4]:5.307130772798E1)[&rate=3.8736050409199867E-4]:1.708440268052E0)[&rate=0.0012797017562859775]:2.529242725072E0)[&rate=6.947701818791127E-4]:1.567630263528E0)[&rate=9.384503242818684E-4]:1.247668858722E0,((((33[&rate=0.0010710865400343954]:5.382847583791E1,13[&rate=5.001354973478715E-4]:5.382847583791E1)[&rate=7.268402115162747E-4]:1.318307610256E1,(11[&rate=3.8736050409199867E-4]:1.823093829742E1,29[&rate=3.7573592875987714E-4]:1.823093829742E1)[&rate=8.190467787222734E-4]:4.878061364305E1)[&rate=0.0014564064571970226]:6.499560280784E-1,(19[&rate=5.232213473755196E-4]:1.891512268222E1,18[&rate=3.131642058071029E-4]:1.891512268222E1)[&rate=4.55010874229066E-4]:4.874638528633E1)[&rate=7.437681029232861E-4]:4.438778721003E0,((10[&rate=4.3264887090995835E-4]:2.31208459947E1,31[&rate=5.712167110770655E-4]:2.31208459947E1)[&rate=4.101752121645793E-4]:4.853928134726E1,23[&rate=5.589399194084568E-4]:7.166012734196E1)[&rate=4.7745073158596946E-4]:4.40159347595E-1)[&rate=3.988270581776256E-4]:9.871064922555E-1)[&rate=5.232213473755196E-4]:3.415118427732E0,(17[&rate=0.0011607922742710819]:6.535871419895E1,(27[&rate=5.964554918672745E-4]:2.594268256355E1,28[&rate=7.989228637558189E-4]:2.594268256355E1)[&rate=9.989341790439031E-4]:3.94160316354E1)[&rate=2.67766647113527E-4]:1.114379741059E1)[&rate=9.67484243199535E-4]:5.162671607857E1); +tree STATE_530000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55163.44126803382,EEF_ucld_branchRates=-266.168517335019,lnP=-55163.44126803382,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.201048767733785E-4]:1.054363450262E1,9[&rate=9.75614857768924E-4]:1.054363450262E1)[&rate=0.0010493515666699235]:5.443612522737E0,15[&rate=7.663262708529015E-4]:1.598724702536E1)[&rate=0.0011558145152787455]:9.726411665777E1,(14[&rate=0.0011558145152787455]:4.306323131585E1,24[&rate=0.0010097378883991146]:4.306323131585E1)[&rate=7.663262708529015E-4]:7.018813236727E1)[&rate=2.6394892594411334E-4]:1.628136163997E1,(((25[&rate=6.876739554861498E-4]:7.446905660393E1,(12[&rate=8.514817575760763E-4]:7.298561782653E1,((16[&rate=4.8463060525152E-4]:3.610427930663E1,((22[&rate=5.023774897964199E-4]:4.366270421273E0,21[&rate=4.757067799012534E-4]:4.366270421273E0)[&rate=4.576593997240058E-4]:2.893479836162E0,20[&rate=0.0013550446420612257]:7.259750257434E0)[&rate=0.0010097378883991146]:2.884452904919E1)[&rate=0.0010493515666699235]:3.555870610436E1,(((30[&rate=7.663262708529015E-4]:4.817816971721E1,26[&rate=7.119398960795844E-4]:4.817816971721E1)[&rate=6.761097152885578E-4]:8.989158965177E0,32[&rate=3.261226972354699E-4]:5.716732868239E1)[&rate=4.484897146270448E-4]:1.11339376383E1,((((4[&rate=4.667236286710051E-4]:2.515328364405E0,3[&rate=4.484897146270448E-4]:2.515328364405E0)[&rate=8.943721715114734E-4]:3.492486234522E-1,2[&rate=5.023774897964199E-4]:2.864576987858E0)[&rate=5.651434725957474E-4]:8.358652686143E0,5[&rate=5.379381007034858E-4]:1.1223229674E1)[&rate=5.379381007034858E-4]:2.938961401615E0,((7[&rate=6.432838617446894E-4]:7.184478180578E0,6[&rate=9.75614857768924E-4]:7.184478180578E0)[&rate=5.9324817835396E-4]:9.872760268561E-1,1[&rate=2.6394892594411334E-4]:8.171754207435E0)[&rate=6.328704041039596E-4]:5.990436868182E0)[&rate=4.2971860674979374E-4]:5.413907524507E1)[&rate=4.2004725843633835E-4]:3.361719090292E0)[&rate=5.837546656929196E-4]:1.322632415549E0)[&rate=6.996043039539798E-4]:1.483438777394E0)[&rate=4.576593997240058E-4]:2.194873190178E0,((((33[&rate=9.45584024423162E-4]:5.224933569739E1,13[&rate=3.6660222528416914E-4]:5.224933569739E1)[&rate=5.469313337905441E-4]:1.62567902815E1,(11[&rate=4.2971860674979374E-4]:1.645071020638E1,29[&rate=4.391868214781889E-4]:1.645071020638E1)[&rate=6.996043039539798E-4]:5.205541577251E1)[&rate=8.720767409869332E-4]:2.65260630808E0,(19[&rate=5.201048767733785E-4]:1.906285676237E1,18[&rate=5.379381007034858E-4]:1.906285676237E1)[&rate=3.7824515710972576E-4]:5.20958755246E1)[&rate=6.539442079494355E-4]:2.921514265764E0,((10[&rate=5.469313337905441E-4]:2.384582496567E1,31[&rate=7.815038390866138E-4]:2.384582496567E1)[&rate=4.391868214781889E-4]:4.932380247273E1,23[&rate=3.6660222528416914E-4]:7.31696274384E1)[&rate=5.559949489613297E-4]:9.1061911433E-1)[&rate=5.651434725957474E-4]:2.583683241375E0)[&rate=7.247251210228187E-4]:4.999013575194E0,(17[&rate=8.323181083164893E-4]:7.248730482138E1,(27[&rate=3.261226972354699E-4]:3.010605352956E1,28[&rate=6.996043039539798E-4]:3.010605352956E1)[&rate=5.290007964546677E-4]:4.238125129183E1)[&rate=7.974822302799315E-4]:9.175638547915E0)[&rate=9.187184814769398E-4]:4.78697819538E1); +tree STATE_540000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.64843165622,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.64843165622,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.1544630886002277E-4]:8.49696429966E0,9[&rate=7.740005924705696E-4]:8.49696429966E0)[&rate=3.8270742006460786E-4]:1.070528155984E1,15[&rate=5.146739461508534E-4]:1.92022458595E1)[&rate=7.546548618267146E-4]:9.697872648995E1,(14[&rate=0.001043052882194593]:4.319250123461E1,24[&rate=9.415824654162893E-4]:4.319250123461E1)[&rate=8.432654267620295E-4]:7.298847111485E1)[&rate=5.91111588288605E-4]:1.013136631051E1,(((25[&rate=6.749655337476249E-4]:7.34324878173E1,(12[&rate=7.949740740800204E-4]:7.099561107078E1,(((((4[&rate=8.716562288123177E-4]:1.920074935662E0,3[&rate=5.059551038038673E-4]:1.920074935662E0)[&rate=6.018250631942973E-4]:4.315739985634E-1,2[&rate=3.9099966544364214E-4]:2.351648934226E0)[&rate=7.949740740800204E-4]:8.825448642872E0,5[&rate=2.9807174608839534E-4]:1.11770975771E1)[&rate=7.198687306549479E-4]:3.843137786695E0,((7[&rate=3.19532167345864E-4]:7.494835048531E0,6[&rate=5.607602709078258E-4]:7.494835048531E0)[&rate=4.4772218031424027E-4]:1.448253681459E0,1[&rate=4.396399400779238E-4]:8.94308872999E0)[&rate=4.558368247207318E-4]:6.077146633803E0)[&rate=3.9920620533767274E-4]:5.440209228832E1,((16[&rate=4.888870165694634E-4]:3.147126558319E1,((22[&rate=9.866500034351427E-4]:3.227367949579E0,21[&rate=2.730962636426102E-4]:3.227367949579E0)[&rate=4.4772218031424027E-4]:3.951502914051E0,20[&rate=4.63997346369957E-4]:7.17887086363E0)[&rate=9.415824654162893E-4]:2.429239471956E1)[&rate=7.040637712632229E-4]:3.418981262427E1,((30[&rate=7.740005924705696E-4]:4.552274415666E1,26[&rate=6.128888776878361E-4]:4.552274415666E1)[&rate=8.716562288123177E-4]:1.129172656385E1,32[&rate=4.805091291950616E-4]:5.681447072051E1)[&rate=3.657639590082731E-4]:8.846607486954E0)[&rate=1.8096793942142306E-4]:3.761249444651E0)[&rate=3.8270742006460786E-4]:1.573283418672E0)[&rate=2.1828524085340813E-4]:2.436876746518E0)[&rate=6.749655337476249E-4]:2.590409415463E0,((((33[&rate=0.001043052882194593]:5.756713617157E1,13[&rate=4.973643271448267E-4]:5.756713617157E1)[&rate=3.0912465322280563E-4]:9.488036374929E0,(11[&rate=2.861676373104266E-4]:1.703832895183E1,29[&rate=5.511507164822027E-4]:1.703832895183E1)[&rate=6.243402339958394E-4]:5.001684359468E1)[&rate=3.9920620533767274E-4]:7.713487384743E-1,(19[&rate=4.1544630886002277E-4]:1.690856412599E1,18[&rate=4.4772218031424027E-4]:1.690856412599E1)[&rate=4.63997346369957E-4]:5.091795715899E1)[&rate=6.128888776878361E-4]:5.362488354827E0,((10[&rate=4.315762700997127E-4]:2.773016396781E1,31[&rate=3.7430495031497753E-4]:2.773016396781E1)[&rate=3.7430495031497753E-4]:4.325021165949E1,23[&rate=4.722170298689768E-4]:7.09803756273E1)[&rate=6.36221375318579E-4]:2.208634012505E0)[&rate=4.315762700997127E-4]:2.833887592961E0)[&rate=5.607602709078258E-4]:2.399667879747E0,(17[&rate=6.128888776878361E-4]:6.923371843241E1,(27[&rate=3.657639590082731E-4]:2.954101293763E1,28[&rate=9.415824654162893E-4]:2.954101293763E1)[&rate=6.749655337476249E-4]:3.969270549478E1)[&rate=3.570512072351533E-4]:9.188846680103E0)[&rate=0.00148894014222946]:4.788977354745E1); +tree STATE_550000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55134.59420464524,EEF_ucld_branchRates=-266.168517335019,lnP=-55134.59420464524,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.0857996776311396E-4]:7.51753793572E0,9[&rate=0.00131327095201233]:7.51753793572E0)[&rate=3.0685045729211575E-4]:1.031588819086E1,15[&rate=3.331700369401996E-4]:1.783342612658E1)[&rate=4.850535740356478E-4]:1.065205524083E2,(14[&rate=0.0014585732984469415]:4.686289567482E1,24[&rate=9.122906086085098E-4]:4.686289567482E1)[&rate=5.23475402240839E-4]:7.749108286002E1)[&rate=4.850535740356478E-4]:4.798231349371E0,(((25[&rate=8.866459836223538E-4]:7.087447795066E1,(12[&rate=0.0010927505659392418]:6.902907632155E1,((16[&rate=5.041335834672442E-4]:3.13860875794E1,((22[&rate=7.661981008276918E-4]:2.867886070863E0,21[&rate=5.041335834672442E-4]:2.867886070863E0)[&rate=3.0685045729211575E-4]:5.319638090645E0,20[&rate=4.850535740356478E-4]:8.187524161508E0)[&rate=0.0010462730575621628]:2.319856341789E1)[&rate=0.0010927505659392418]:3.646377153606E1,(((30[&rate=7.050691306337577E-4]:4.70082722327E1,26[&rate=6.912865481536104E-4]:4.70082722327E1)[&rate=0.0010064260698355039]:1.032759685318E1,32[&rate=4.7557182167836136E-4]:5.733586908588E1)[&rate=4.6610673813248936E-4]:6.418063770402E0,((((4[&rate=2.298897225265997E-4]:1.79737082489E0,3[&rate=8.014732461513778E-4]:1.79737082489E0)[&rate=4.376296554408738E-4]:5.5437501245E-1,2[&rate=0.0010064260698355039]:2.35174583734E0)[&rate=8.206741331456585E-4]:8.087774116945E0,5[&rate=1.8822984901575211E-4]:1.043951995428E1)[&rate=4.945687614974984E-4]:5.353450158287E0,((7[&rate=5.432052038311832E-4]:8.573923413854E0,6[&rate=0.0010064260698355039]:8.573923413854E0)[&rate=4.183683141949107E-4]:2.467099586204E0,1[&rate=4.183683141949107E-4]:1.104102300006E1)[&rate=4.945687614974984E-4]:4.751947112513E0)[&rate=5.432052038311832E-4]:4.796096274371E1)[&rate=6.287664797437637E-4]:4.09592625918E0)[&rate=0.0010927505659392418]:1.179217206082E0)[&rate=4.471551054370444E-4]:1.845401629109E0)[&rate=7.050691306337577E-4]:2.319713134926E0,((((33[&rate=8.630325009411359E-4]:5.626872348351E1,13[&rate=5.33283852856344E-4]:5.626872348351E1)[&rate=6.651233360779689E-4]:1.011592092219E1,(11[&rate=3.9864520232109194E-4]:1.637158360417E1,29[&rate=6.060686814467614E-4]:1.637158360417E1)[&rate=7.661981008276918E-4]:5.001306080153E1)[&rate=5.634525268602962E-4]:2.821872248993E0,(19[&rate=4.2804226378353484E-4]:1.798350365984E1,18[&rate=6.287664797437637E-4]:1.798350365984E1)[&rate=6.779866359722978E-4]:5.122301299486E1)[&rate=3.0685045729211575E-4]:2.015205797606E0,((10[&rate=7.050691306337577E-4]:2.090674851784E1,31[&rate=4.2804226378353484E-4]:2.090674851784E1)[&rate=3.885265160918255E-4]:4.980861699718E1,23[&rate=4.376296554408738E-4]:7.071536551502E1)[&rate=9.403888271399568E-4]:5.06356937276E-1)[&rate=5.23475402240839E-4]:1.972468633285E0)[&rate=4.0857996776311396E-4]:3.033314864789E0,(17[&rate=8.630325009411359E-4]:6.460903667277E1,(27[&rate=5.738130285130736E-4]:3.070426483557E1,28[&rate=7.661981008276918E-4]:3.070426483557E1)[&rate=7.342993838688267E-4]:3.39047718372E1)[&rate=3.4514541100480353E-4]:1.161846927761E1)[&rate=0.0017813912757089552]:5.292470393383E1); +tree STATE_560000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.49960113931,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.49960113931,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.29300076273655E-4]:9.113279101986E0,9[&rate=7.412115019669526E-4]:9.113279101986E0)[&rate=4.38539045385934E-4]:8.912648106391E0,15[&rate=3.450627957153178E-4]:1.802592720838E1)[&rate=8.410830254880806E-4]:1.038165286725E2,(14[&rate=6.654188240603583E-4]:5.575563303631E1,24[&rate=8.841372330175281E-4]:5.575563303631E1)[&rate=7.412115019669526E-4]:6.60868228446E1)[&rate=0.0010399707859636035]:7.137555708792E0,(((25[&rate=8.410830254880806E-4]:7.296124628874E1,(12[&rate=6.769819427416583E-4]:7.191326403401E1,((16[&rate=3.172825825495252E-4]:3.190469999487E1,((22[&rate=0.0013483774972040418]:2.78072219906E0,21[&rate=5.009300681510649E-4]:2.78072219906E0)[&rate=3.573261054357738E-4]:5.089317278484E0,20[&rate=5.097594125789705E-4]:7.870039477544E0)[&rate=0.0012269380570410896]:2.403466051733E1)[&rate=0.0010399707859636035]:3.773638098455E1,(((30[&rate=6.889143603064513E-4]:4.85294611298E1,26[&rate=6.769819427416583E-4]:4.85294611298E1)[&rate=9.657786324838956E-4]:1.330671742644E1,32[&rate=5.922798003765621E-4]:6.183617855624E1)[&rate=5.009300681510649E-4]:6.420600598332E0,((((4[&rate=8.841372330175281E-4]:2.183838364729E0,3[&rate=9.657786324838956E-4]:2.183838364729E0)[&rate=3.3183424199632807E-4]:7.123110022071E-1,2[&rate=7.557058380117462E-4]:2.896149366936E0)[&rate=5.186176059053825E-4]:9.02282491867E0,5[&rate=2.1381373770048236E-4]:1.191897428561E1)[&rate=4.655862956022293E-4]:3.856908632053E0,((7[&rate=4.1990010290694844E-4]:9.020342065663E0,6[&rate=8.038617660029885E-4]:9.020342065663E0)[&rate=0.0010399707859636035]:1.695998487695E0,1[&rate=5.455115597175455E-4]:1.071634055336E1)[&rate=4.832965691191022E-4]:5.059542364301E0)[&rate=5.455115597175455E-4]:5.248089623692E1)[&rate=6.22211884442476E-4]:1.384301824847E0)[&rate=4.921143972752127E-4]:2.27218305459E0)[&rate=4.38539045385934E-4]:1.047982254726E0)[&rate=4.38539045385934E-4]:1.736224912153E0,((((33[&rate=0.0010399707859636035]:5.609063339454E1,13[&rate=3.688569615758371E-4]:5.609063339454E1)[&rate=5.455115597175455E-4]:1.311665239543E1,(11[&rate=6.889143603064513E-4]:1.817366890111E1,29[&rate=5.546308678558558E-4]:1.817366890111E1)[&rate=8.617524774238938E-4]:5.103361688886E1)[&rate=4.655862956022293E-4]:4.152204324052E-1,(19[&rate=7.557058380117462E-4]:2.166564776716E1,18[&rate=4.103018453597938E-4]:2.166564776716E1)[&rate=5.546308678558558E-4]:4.795685845522E1)[&rate=6.326133906992593E-4]:2.739949673658E0,((10[&rate=4.476486917999265E-4]:2.224811173548E1,31[&rate=7.012554791514533E-4]:2.224811173548E1)[&rate=2.8126759576665473E-4]:4.839924167043E1,23[&rate=4.655862956022293E-4]:7.064735340591E1)[&rate=5.097594125789705E-4]:1.715102490122E0)[&rate=4.29300076273655E-4]:2.335015304859E0)[&rate=5.275193833971887E-4]:6.495716735606E0,(17[&rate=9.657786324838956E-4]:7.373665788277E1,(27[&rate=5.097594125789705E-4]:3.168010685138E1,28[&rate=7.869263206765462E-4]:3.168010685138E1)[&rate=5.638518997048453E-4]:4.205655103139E1)[&rate=6.326133906992593E-4]:7.456530053726E0)[&rate=0.0016140119019947305]:4.778682365321E1); +tree STATE_570000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55135.366647744035,EEF_ucld_branchRates=-266.168517335019,lnP=-55135.366647744035,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.478911097603412E-4]:9.855325101416E0,9[&rate=3.642610821164346E-4]:9.855325101416E0)[&rate=1.6175371215474695E-4]:8.315635631645E0,15[&rate=4.1216449340581004E-4]:1.817096073306E1)[&rate=7.694035655201052E-4]:1.041312451429E2,(14[&rate=9.660659011024638E-4]:5.790748143972E1,24[&rate=6.930074170788266E-4]:5.790748143972E1)[&rate=8.478052411206571E-4]:6.439472443623E1)[&rate=0.0011027962275968004]:5.898574619171E0,(((25[&rate=7.480289076371462E-4]:7.412060652183E1,(12[&rate=6.475341223501684E-4]:7.224386409835E1,((16[&rate=3.9625236414774797E-4]:3.166381804443E1,((22[&rate=9.196246206156491E-4]:2.855579286783E0,21[&rate=3.5612533748472755E-4]:2.855579286783E0)[&rate=7.694035655201052E-4]:4.406935063046E0,20[&rate=5.326367136258695E-4]:7.262514349829E0)[&rate=0.0011027962275968004]:2.44013036946E1)[&rate=8.809654677102866E-4]:3.804159448334E1,(((((4[&rate=4.609570674791095E-4]:2.242034939494E0,3[&rate=5.84939079559011E-4]:2.242034939494E0)[&rate=4.042023709379725E-4]:6.137808759285E-1,2[&rate=2.621625324018625E-4]:2.855815815422E0)[&rate=5.326367136258695E-4]:8.35709271591E0,5[&rate=4.7793081648459836E-4]:1.121290853133E1)[&rate=6.769838987096496E-4]:3.205881676925E0,((7[&rate=2.8437087635954997E-4]:8.788733937428E0,6[&rate=4.526370661881297E-4]:8.788733937428E0)[&rate=3.5612533748472755E-4]:7.388100720618E-1,1[&rate=2.3536047382502115E-4]:9.527544009489E0)[&rate=5.738176689291912E-4]:4.891246198767E0)[&rate=3.8032851371430144E-4]:5.266286024692E1,((30[&rate=4.609570674791095E-4]:4.928721659867E1,26[&rate=6.475341223501684E-4]:4.928721659867E1)[&rate=4.7793081648459836E-4]:1.179592125673E1,32[&rate=5.738176689291912E-4]:6.10831378554E1)[&rate=3.723218762969301E-4]:5.998512599777E0)[&rate=4.6938360912205214E-4]:2.623762072589E0)[&rate=5.84939079559011E-4]:2.538451570585E0)[&rate=4.362623115223999E-4]:1.876742423483E0)[&rate=4.2015283330261324E-4]:1.381579183363E0,((((11[&rate=3.3953131257127264E-4]:2.068619714373E1,29[&rate=3.8032851371430144E-4]:2.068619714373E1)[&rate=5.964614181758415E-4]:4.571192484641E1,(33[&rate=8.187327483597052E-4]:5.597955514893E1,13[&rate=6.208893288530181E-4]:5.597955514893E1)[&rate=5.84939079559011E-4]:1.04185668412E1)[&rate=2.736669350120155E-4]:2.860590072781E0,(19[&rate=3.478911097603412E-4]:1.690920731217E1,18[&rate=5.230229372947553E-4]:1.690920731217E1)[&rate=4.2015283330261324E-4]:5.234950475074E1)[&rate=8.478052411206571E-4]:2.722093665951E0,((10[&rate=2.8437087635954997E-4]:2.410452144772E1,31[&rate=7.283407027614363E-4]:2.410452144772E1)[&rate=4.444099344868048E-4]:4.641056532905E1,23[&rate=4.362623115223999E-4]:7.051508677677E1)[&rate=2.186180124365165E-4]:1.46571895209E0)[&rate=4.1216449340581004E-4]:3.521379976334E0)[&rate=3.642610821164346E-4]:5.199962473571E0,(17[&rate=7.928150912944797E-4]:7.152221203929E1,(27[&rate=3.310142059693028E-4]:3.451294188468E1,28[&rate=0.0010243483771150965]:3.451294188468E1)[&rate=4.444099344868048E-4]:3.700927015461E1)[&rate=6.475341223501684E-4]:9.179936139476E0)[&rate=0.0014904827604145042]:4.749863231635E1); +tree STATE_580000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55169.289656861656,EEF_ucld_branchRates=-266.168517335019,lnP=-55169.289656861656,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.8961543131714064E-4]:1.282306621762E1,9[&rate=9.245478813904866E-4]:1.282306621762E1)[&rate=0.0010394522628233826]:5.31298886273E0,15[&rate=4.182872594149562E-4]:1.813605508035E1)[&rate=6.455493134839455E-4]:1.007853681625E2,(14[&rate=9.581910990938784E-4]:5.063895385623E1,24[&rate=7.565074434320698E-4]:5.063895385623E1)[&rate=9.960704975906316E-4]:6.828246938658E1)[&rate=5.823754125576093E-4]:9.043537058974E0,(((25[&rate=6.455493134839455E-4]:7.319077747117E1,((16[&rate=4.469477722747732E-4]:3.086004495715E1,((22[&rate=5.061116378058913E-4]:2.667510803497E0,21[&rate=2.83559894387853E-4]:2.667510803497E0)[&rate=2.95909751950659E-4]:4.956609529789E0,20[&rate=4.469477722747732E-4]:7.624120333286E0)[&rate=0.0013340737882894234]:2.323592462386E1)[&rate=0.001229053857705501]:4.017167200578E1,(12[&rate=7.961626326534668E-4]:7.077072674417E1,(((((4[&rate=3.992071200185751E-4]:2.029299030717E0,3[&rate=6.739159469208513E-4]:2.029299030717E0)[&rate=3.992071200185751E-4]:5.690540003324E-1,2[&rate=1.5808799797170992E-4]:2.598353031049E0)[&rate=5.164021599534896E-4]:6.751224543646E0,5[&rate=7.383309542517646E-4]:9.349577574695E0)[&rate=2.20937534681154E-4]:2.237663855551E0,((7[&rate=3.4007900399831526E-4]:8.385570384316E0,1[&rate=2.398161577863408E-4]:8.385570384316E0)[&rate=0.0011516030654094526]:1.716928441494E0,6[&rate=4.959717119349778E-4]:1.010249882581E1)[&rate=7.04652047685281E-4]:1.484742604436E0)[&rate=4.959717119349778E-4]:5.88307628311E1,((30[&rate=9.245478813904866E-4]:4.62906291909E1,26[&rate=6.455493134839455E-4]:4.62906291909E1)[&rate=9.960704975906316E-4]:1.135573733843E1,32[&rate=5.268610324684007E-4]:5.764636652933E1)[&rate=3.799584489654808E-4]:1.277163773202E1)[&rate=0.0018644487731456923]:3.52722482828E-1)[&rate=3.603380944042894E-4]:2.609902187583E-1)[&rate=6.889558849280146E-4]:2.15906050824E0)[&rate=5.94281824496585E-4]:8.664707110471E-1,((((11[&rate=3.603380944042894E-4]:2.59358912043E1,29[&rate=3.992071200185751E-4]:2.59358912043E1)[&rate=6.594662556819046E-4]:3.996968090421E1,(33[&rate=5.268610324684007E-4]:5.469346130962E1,13[&rate=3.799584489654808E-4]:5.469346130962E1)[&rate=4.959717119349778E-4]:1.121211079889E1)[&rate=4.565832039642366E-4]:6.270673429973E-1,(19[&rate=8.667014734872413E-4]:1.618364786538E1,18[&rate=4.469477722747732E-4]:1.618364786538E1)[&rate=2.83559894387853E-4]:5.034899158613E1)[&rate=3.603380944042894E-4]:4.238365614207E0,((10[&rate=6.739159469208513E-4]:2.213600859587E1,31[&rate=7.383309542517646E-4]:2.213600859587E1)[&rate=4.278169042684203E-4]:4.818223230315E1,23[&rate=4.565832039642366E-4]:7.031824089902E1)[&rate=2.95909751950659E-4]:4.527641667014E-1)[&rate=4.76075890845241E-4]:3.286243116501E0)[&rate=5.061116378058913E-4]:4.643540046922E0,(17[&rate=8.413921628114295E-4]:7.014695938176E1,(27[&rate=5.707702188812689E-4]:3.329825673217E1,28[&rate=8.942626161134217E-4]:3.329825673217E1)[&rate=0.0010902571907514837]:3.684870264959E1)[&rate=4.76075890845241E-4]:8.553828847379E0)[&rate=0.0013340737882894234]:4.926417207265E1); +tree STATE_590000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55155.96573671741,EEF_ucld_branchRates=-266.168517335019,lnP=-55155.96573671741,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.4527429507756754E-4]:1.139499282749E1,9[&rate=6.224010699736582E-4]:1.139499282749E1)[&rate=4.7539842850628317E-4]:8.389126366746E0,15[&rate=4.5135119621584924E-4]:1.978411919424E1)[&rate=0.0011140578222603827]:9.713250415434E1,(14[&rate=0.0012189012223916594]:5.006571326729E1,24[&rate=7.221189629134619E-4]:5.006571326729E1)[&rate=0.001163173120269999]:6.685091008129E1)[&rate=2.3639526824492533E-4]:1.113386217534E1,(((25[&rate=8.491914294836488E-4]:7.131736817974E1,(12[&rate=7.605922462194461E-4]:6.99315027795E1,((((((4[&rate=2.5254273898511076E-4]:2.517058752778E0,2[&rate=1.722422872270133E-4]:2.517058752778E0)[&rate=5.515643155597016E-4]:3.877189391211E-1,3[&rate=7.811280633002363E-4]:2.904777691899E0)[&rate=7.221189629134619E-4]:6.790406426654E0,5[&rate=3.331411534683479E-4]:9.695184118553E0)[&rate=4.7539842850628317E-4]:2.964827967777E0,((7[&rate=2.9513596401192625E-4]:8.392064211087E0,1[&rate=5.383249453283486E-4]:8.392064211087E0)[&rate=0.0012189012223916594]:6.979260357699E-1,6[&rate=6.865834524506589E-4]:9.089990246857E0)[&rate=5.515643155597016E-4]:3.570021839473E0)[&rate=3.925653153128451E-4]:5.476979377709E1,((30[&rate=7.221189629134619E-4]:4.867572279776E1,26[&rate=3.925653153128451E-4]:4.867572279776E1)[&rate=9.301161474425664E-4]:1.355310096071E1,32[&rate=4.8762096941850513E-4]:6.222882375847E1)[&rate=3.925653153128451E-4]:5.200982104952E0)[&rate=0.002597759902976142]:1.11691919109E0,(16[&rate=2.816423626928966E-4]:2.849541117807E1,((22[&rate=0.0014522042793511621]:3.737482191722E0,21[&rate=0.0014522042793511621]:3.737482191722E0)[&rate=8.026590893763382E-4]:4.254964548982E0,20[&rate=3.925653153128451E-4]:7.992446740704E0)[&rate=0.0017343237256907936]:2.050296443737E1)[&rate=7.409515192381634E-4]:4.005131387644E1)[&rate=0.0015709001462284324]:1.384777724987E0)[&rate=3.4527429507756754E-4]:1.385865400243E0)[&rate=6.534783551950476E-4]:6.103761746914E-1,((((11[&rate=2.9513596401192625E-4]:2.340482505403E1,29[&rate=3.4527429507756754E-4]:2.340482505403E1)[&rate=8.744894334082139E-4]:4.228348411877E1,(33[&rate=5.650763642087299E-4]:5.92657438606E1,13[&rate=4.8762096941850513E-4]:5.92657438606E1)[&rate=4.7539842850628317E-4]:6.422565312199E0)[&rate=0.001070159803974363]:1.693119269154E0,(19[&rate=8.491914294836488E-4]:1.269378954735E1,18[&rate=0.0012189012223916594]:1.269378954735E1)[&rate=4.394851962087263E-4]:5.46876388946E1)[&rate=4.0426010937532296E-4]:2.794873674075E0,((10[&rate=5.253337274823459E-4]:1.678029783645E1,31[&rate=4.633153603850051E-4]:1.678029783645E1)[&rate=4.276961722695802E-4]:5.304958770989E1,23[&rate=4.0426010937532296E-4]:6.982988554634E1)[&rate=0.001070159803974363]:3.464165696827E-1)[&rate=5.253337274823459E-4]:1.751442238409E0)[&rate=1.722422872270133E-4]:5.054199298487E0,(17[&rate=0.001070159803974363]:6.539063960308E1,(27[&rate=5.383249453283486E-4]:3.245958242735E1,28[&rate=0.0010304767711511915]:3.245958242735E1)[&rate=7.605922462194461E-4]:3.293105717573E1)[&rate=5.788871268762002E-4]:1.159130404983E1)[&rate=0.0017343237256907936]:5.1068541871E1); +tree STATE_600000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55148.025053325895,EEF_ucld_branchRates=-266.168517335019,lnP=-55148.025053325895,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.252561604677114E-4]:9.105492286804E0,9[&rate=0.0012513467873844647]:9.105492286804E0)[&rate=8.526671747214242E-4]:7.211824672027E0,15[&rate=7.92490750923537E-4]:1.631731695883E1)[&rate=6.379814080920265E-4]:1.002285610906E2,(14[&rate=0.0011110803729940295]:5.125302562708E1,24[&rate=6.274888806055935E-4]:5.125302562708E1)[&rate=8.21413279316149E-4]:6.52928524223E1)[&rate=0.0018570935421146672]:1.295861859403E1,(((25[&rate=0.0010171321646475046]:7.063856386855E1,(12[&rate=7.787607174877523E-4]:6.918771986101E1,((((((4[&rate=5.45739595675468E-4]:2.063495197887E0,2[&rate=2.943375908919395E-4]:2.063495197887E0)[&rate=6.379814080920265E-4]:1.129264419461E0,3[&rate=6.702318828309839E-4]:3.192759617348E0)[&rate=0.0010171321646475046]:7.849283641675E0,5[&rate=3.816506509996253E-4]:1.104204325902E1)[&rate=6.379814080920265E-4]:1.760577239727E0,((7[&rate=3.649100919084482E-4]:7.934250896611E0,6[&rate=0.0013198980088254591]:7.934250896611E0)[&rate=0.0010171321646475046]:5.523644618441E-1,1[&rate=5.761948270836841E-4]:8.486615358455E0)[&rate=8.367160360219629E-4]:4.316005140295E0)[&rate=6.274888806055935E-4]:5.329724388748E1,((30[&rate=8.693454842818094E-4]:4.926227676215E1,26[&rate=7.157404046607254E-4]:4.926227676215E1)[&rate=7.787607174877523E-4]:8.869695342552E0,32[&rate=4.719247259270646E-4]:5.813197210471E1)[&rate=5.252561604677114E-4]:7.967892281523E0)[&rate=4.3685186471002595E-4]:2.334650435579E0,(16[&rate=2.943375908919395E-4]:2.772617174909E1,((22[&rate=0.0010452721118562882]:3.376505896572E0,21[&rate=5.66051935269338E-4]:3.376505896572E0)[&rate=4.1097753348241366E-4]:2.575638121346E0,20[&rate=5.863534985006327E-4]:5.952144017918E0)[&rate=0.0014116209485293392]:2.177402773117E1)[&rate=8.693454842818094E-4]:4.070834307272E1)[&rate=0.0011964582531113113]:7.532050391985E-1)[&rate=5.965454091502141E-4]:1.450844007546E0)[&rate=7.157404046607254E-4]:1.565339583713E0,((((33[&rate=7.525353796351676E-4]:5.605240753305E1,13[&rate=5.559066096106502E-4]:5.605240753305E1)[&rate=5.148925617517198E-4]:1.041610395821E1,(11[&rate=5.148925617517198E-4]:1.55805909733E1,29[&rate=5.148925617517198E-4]:1.55805909733E1)[&rate=5.559066096106502E-4]:5.088792051796E1)[&rate=8.367160360219629E-4]:1.481463332444E0,(19[&rate=6.48591023756532E-4]:1.812086178623E1,18[&rate=0.0010763377649697006]:1.812086178623E1)[&rate=5.761948270836841E-4]:4.982911303747E1)[&rate=6.593351562629257E-4]:2.044503493173E0,((10[&rate=8.066911227439471E-4]:1.772301597605E1,31[&rate=9.24758038308952E-4]:1.772301597605E1)[&rate=4.719247259270646E-4]:5.1282961527E1,23[&rate=4.606024704276793E-4]:6.900597750305E1)[&rate=4.719247259270646E-4]:9.885008138197E-1)[&rate=5.044117522000342E-4]:2.209425135393E0)[&rate=9.913734738978201E-4]:3.521260744084E0,(17[&rate=0.0010171321646475046]:5.854967406272E1,(27[&rate=5.965454091502141E-4]:2.593711765682E1,28[&rate=0.0011110803729940295]:2.593711765682E1)[&rate=7.92490750923537E-4]:3.26125564059E1)[&rate=4.2424328687069786E-4]:1.717549013363E1)[&rate=0.0013198980088254591]:5.377933244706E1); +tree STATE_610000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55143.56266597992,EEF_ucld_branchRates=-266.168517335019,lnP=-55143.56266597992,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.92826312958095E-4]:1.081409694648E1,9[&rate=3.9590099384968877E-4]:1.081409694648E1)[&rate=7.677171296929206E-4]:6.363876116404E0,15[&rate=4.93990432806394E-4]:1.717797306288E1)[&rate=5.661602017339896E-4]:1.032314989537E2,(14[&rate=8.953426382597767E-4]:4.916874547016E1,24[&rate=7.677171296929206E-4]:4.916874547016E1)[&rate=9.226395450953851E-4]:7.124072654645E1)[&rate=0.0018670014011812205]:9.210147831603E0,(((25[&rate=7.033438864993871E-4]:7.437652101306E1,(12[&rate=7.505013442903295E-4]:7.297713445874E1,((((30[&rate=6.357210026560328E-4]:5.179170261805E1,26[&rate=4.93990432806394E-4]:5.179170261805E1)[&rate=0.0011158271334833698]:8.198564114579E0,32[&rate=4.256040835342958E-4]:5.999026673263E1)[&rate=2.1603313244788024E-4]:8.029910486121E0,((((4[&rate=2.1603313244788024E-4]:2.351373308904E0,2[&rate=4.6455731210343044E-4]:2.351373308904E0)[&rate=5.343973416873613E-4]:2.166079627539E0,3[&rate=5.241217911849296E-4]:4.517452936443E0)[&rate=6.357210026560328E-4]:7.543450549471E0,5[&rate=4.157890743700991E-4]:1.206090348591E1)[&rate=3.314416296937542E-4]:1.628943777344E0,((7[&rate=4.0589732049713464E-4]:8.386337084943E0,6[&rate=8.469945474455298E-4]:8.386337084943E0)[&rate=3.430036054881071E-4]:8.241171602794E-1,1[&rate=4.256040835342958E-4]:9.210454245222E0)[&rate=4.743181596953487E-4]:4.479393018035E0)[&rate=4.6455731210343044E-4]:5.433032995549E1)[&rate=5.448169492247349E-4]:1.262398214411E0,(16[&rate=4.5482396167089556E-4]:3.017287096754E1,((22[&rate=4.157890743700991E-4]:3.444031476786E0,21[&rate=9.858253041370826E-4]:3.444031476786E0)[&rate=4.8412365339635047E-4]:2.693455680162E0,20[&rate=0.0011759915896498781]:6.137487156948E0)[&rate=0.0018670014011812205]:2.403538381059E1)[&rate=7.033438864993871E-4]:3.910970446562E1)[&rate=0.0010231830552130795]:3.694559025581E0)[&rate=9.525950752953957E-4]:1.399386554321E0)[&rate=3.754616060835366E-4]:8.416227866494E-1,((((19[&rate=7.183956276097932E-4]:1.566919413395E1,18[&rate=7.505013442903295E-4]:1.566919413395E1)[&rate=2.6102612308969244E-4]:5.129460174857E1,(11[&rate=5.343973416873613E-4]:1.218381794821E1,29[&rate=6.614369908750717E-4]:1.218381794821E1)[&rate=5.771220661498493E-4]:5.477997793431E1)[&rate=4.743181596953487E-4]:9.324423640283E-1,(33[&rate=9.525950752953957E-4]:5.470285142967E1,13[&rate=4.5482396167089556E-4]:5.470285142967E1)[&rate=3.541399749592956E-4]:1.319338681687E1)[&rate=5.343973416873613E-4]:4.903789231516E0,((10[&rate=6.888699888834126E-4]:2.076039145153E1,31[&rate=6.114243464700662E-4]:2.076039145153E1)[&rate=4.157890743700991E-4]:5.110699791217E1,23[&rate=5.241217911849296E-4]:7.18673893637E1)[&rate=0.0011158271334833698]:9.326381143586E-1)[&rate=3.754616060835366E-4]:2.418116321653E0)[&rate=8.953426382597767E-4]:4.098509581223E0,(17[&rate=8.953426382597767E-4]:6.801139035141E1,(27[&rate=3.065433746060866E-4]:3.011856302229E1,28[&rate=0.0011759915896498781]:3.011856302229E1)[&rate=6.749175403934079E-4]:3.789282732912E1)[&rate=6.888699888834126E-4]:1.130526302952E1)[&rate=9.858253041370826E-4]:5.030296646727E1); +tree STATE_620000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55145.98986099624,EEF_ucld_branchRates=-266.168517335019,lnP=-55145.98986099624,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.772531354841788E-4]:8.754788552752E0,9[&rate=4.670572242018581E-4]:8.754788552752E0)[&rate=4.835505461163034E-4]:8.381643017706E0,15[&rate=5.775805382379157E-4]:1.713643157046E1)[&rate=8.910599905816067E-4]:1.001592210717E2,(14[&rate=7.464731104412755E-4]:5.238290739628E1,24[&rate=0.001009592683153325]:5.238290739628E1)[&rate=9.148381362090295E-4]:6.49127452459E1)[&rate=6.531316703144088E-4]:1.227527349039E1,(((25[&rate=7.345816890368084E-4]:7.465371553311E1,(12[&rate=9.727418567070095E-4]:7.251963493453E1,((16[&rate=4.5856127303991323E-4]:2.876298991607E1,((22[&rate=7.464731104412755E-4]:3.540115691475E0,21[&rate=6.717298306929284E-4]:3.540115691475E0)[&rate=6.099070466317411E-4]:3.25951782161E0,20[&rate=0.0014004881160733758]:6.799633513085E0)[&rate=0.0014004881160733758]:2.196335640298E1)[&rate=9.148381362090295E-4]:4.187016266706E1,(((((4[&rate=4.31610975582677E-4]:3.496456680061E0,2[&rate=8.323444644391923E-4]:3.496456680061E0)[&rate=7.231714630174019E-4]:1.783971870552E-1,3[&rate=6.91338539166491E-4]:3.674853867116E0)[&rate=6.813946063925839E-4]:8.492464201494E0,5[&rate=5.230530378702241E-4]:1.216731806861E1)[&rate=5.385571180291854E-4]:2.443164991969E0,((7[&rate=4.835505461163034E-4]:9.248258719485E0,6[&rate=5.230530378702241E-4]:9.248258719485E0)[&rate=6.016817111493315E-4]:1.565840852277E0,1[&rate=5.775805382379157E-4]:1.081409957176E1)[&rate=5.775805382379157E-4]:3.796383488818E0)[&rate=6.441517582742793E-4]:5.499315419504E1,((30[&rate=5.696948129778536E-4]:5.357453249933E1,26[&rate=7.345816890368084E-4]:5.357453249933E1)[&rate=4.670572242018581E-4]:1.123931729032E1,32[&rate=3.477626364913423E-4]:6.481384978965E1)[&rate=3.0416370925180424E-4]:4.789787465972E0)[&rate=8.910599905816067E-4]:1.029515327509E0)[&rate=6.441517582742793E-4]:1.886482351397E0)[&rate=5.230530378702241E-4]:2.134080598586E0)[&rate=5.775805382379157E-4]:4.28393029181E-1,((((33[&rate=8.696870470186756E-4]:5.402534389898E1,13[&rate=4.835505461163034E-4]:5.402534389898E1)[&rate=4.5856127303991323E-4]:1.141364263828E1,(11[&rate=5.463058192322207E-4]:1.335223283881E1,29[&rate=9.727418567070095E-4]:1.335223283881E1)[&rate=7.015921692256204E-4]:5.208675369845E1)[&rate=8.696870470186756E-4]:2.298436961206E0,(19[&rate=4.2195628498482266E-4]:1.765225196198E1,18[&rate=5.152696631948183E-4]:1.765225196198E1)[&rate=5.463058192322207E-4]:5.008517153649E1)[&rate=2.620300102854957E-4]:5.689176650212E0,((10[&rate=8.002636442163751E-4]:2.252234613025E1,31[&rate=5.696948129778536E-4]:2.252234613025E1)[&rate=4.835505461163034E-4]:4.945955339188E1,23[&rate=4.835505461163034E-4]:7.198189952212E1)[&rate=6.813946063925839E-4]:1.444700626554E0)[&rate=4.011309770929499E-4]:1.655508413616E0)[&rate=5.152696631948183E-4]:3.750762512371E0,(17[&rate=8.323444644391923E-4]:7.136060793704E1,(27[&rate=3.896817702732205E-4]:3.217678716365E1,28[&rate=7.121900272259449E-4]:3.217678716365E1)[&rate=5.308107311677672E-4]:3.918382077339E1)[&rate=8.502330483232265E-4]:7.472263137619E0)[&rate=0.001009592683153325]:5.07380550579E1); +tree STATE_630000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55128.22977084982,EEF_ucld_branchRates=-266.168517335019,lnP=-55128.22977084982,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.665573739578744E-4]:1.026341004866E1,9[&rate=0.0010280129006419935]:1.026341004866E1)[&rate=3.1725646619593664E-4]:9.392624440948E0,15[&rate=4.6242253713915036E-4]:1.96560344896E1)[&rate=6.73291636828245E-4]:9.745158557874E1,(14[&rate=0.0010726453586898303]:5.397147671925E1,24[&rate=6.843753552346068E-4]:5.397147671925E1)[&rate=0.0010280129006419935]:6.313614334909E1)[&rate=4.7123684534488246E-4]:1.289015265958E1,(((25[&rate=5.402755567036285E-4]:7.448122340446E1,(12[&rate=9.299541147545797E-4]:7.284081802928E1,(((16[&rate=4.6242253713915036E-4]:3.038018485645E1,((22[&rate=8.224585374932151E-4]:3.781367060871E0,21[&rate=6.029436748120459E-4]:3.781367060871E0)[&rate=6.417908747848644E-4]:3.964395339553E0,20[&rate=4.4443901082761705E-4]:7.745762400424E0)[&rate=0.0015592375307999949]:2.263442245603E1)[&rate=7.32541185963187E-4]:3.875793806567E1,((30[&rate=5.845094991035025E-4]:5.084538711837E1,26[&rate=5.577247925206013E-4]:5.084538711837E1)[&rate=7.32541185963187E-4]:1.087629609323E1,32[&rate=2.2956263905304716E-4]:6.17216832116E1)[&rate=6.317854094466663E-4]:7.416439710526E0)[&rate=5.665573739578744E-4]:1.700710914886E0,((((4[&rate=7.595812721711891E-4]:2.224035276614E0,2[&rate=5.577247925206013E-4]:2.224035276614E0)[&rate=0.0015592375307999949]:7.289287903098E-1,3[&rate=6.958026990553053E-4]:2.952964066923E0)[&rate=9.045028823194434E-4]:9.013417115369E0,5[&rate=5.144312934787178E-4]:1.196638118229E1)[&rate=5.665573739578744E-4]:3.184660448679E0,((7[&rate=4.061003665697368E-4]:9.412200989238E0,6[&rate=8.602501806967912E-4]:9.412200989238E0)[&rate=5.058469948395923E-4]:1.245646915009E0,1[&rate=4.3521061082542003E-4]:1.065784790425E1)[&rate=4.3521061082542003E-4]:4.493193726724E0)[&rate=4.972525550017419E-4]:5.568779220604E1)[&rate=5.058469948395923E-4]:2.00198419227E0)[&rate=7.198408110336401E-4]:1.640405375182E0)[&rate=6.520273109638935E-4]:1.442388752066E0,((((33[&rate=7.457667097813703E-4]:5.726723838262E1,13[&rate=4.4443901082761705E-4]:5.726723838262E1)[&rate=3.613308019763696E-4]:1.388113796793E1,(11[&rate=3.734902675312092E-4]:1.423704570151E1,29[&rate=7.198408110336401E-4]:1.423704570151E1)[&rate=9.045028823194434E-4]:5.691133064903E1)[&rate=2.7221794075608273E-4]:7.854409028787E-1,(19[&rate=4.7123684534488246E-4]:1.707854549924E1,18[&rate=5.144312934787178E-4]:1.707854549924E1)[&rate=4.972525550017419E-4]:5.485527175418E1)[&rate=5.577247925206013E-4]:2.185812613132E0,((10[&rate=5.144312934787178E-4]:2.076823058573E1,31[&rate=9.045028823194434E-4]:2.076823058573E1)[&rate=4.6242253713915036E-4]:5.211660193403E1,23[&rate=3.4818890138194633E-4]:7.288483251976E1)[&rate=9.045028823194434E-4]:1.234797346792E0)[&rate=8.602501806967912E-4]:1.80398228997E0)[&rate=9.299541147545797E-4]:4.540258174445E0,(17[&rate=6.73291636828245E-4]:7.183708569642E1,(27[&rate=5.31630964803316E-4]:3.557288177598E1,28[&rate=9.299541147545797E-4]:3.557288177598E1)[&rate=7.740597694382984E-4]:3.626420392044E1)[&rate=3.849035955666123E-4]:8.626784634547E0)[&rate=0.0010726453586898303]:4.953390239696E1); +tree STATE_640000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55125.52439721586,EEF_ucld_branchRates=-266.168517335019,lnP=-55125.52439721586,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.7431374097376713E-4]:9.143170943603E0,9[&rate=9.077954472193951E-4]:9.143170943603E0)[&rate=4.5498959037579533E-4]:7.430138869168E0,15[&rate=8.161403134002425E-4]:1.657330981277E1)[&rate=0.0010415668547006885]:9.241303075708E1,(14[&rate=0.0017356208513708254]:4.344960721005E1,24[&rate=0.0011211117316395488]:4.344960721005E1)[&rate=0.001009187646930125]:6.55367333598E1)[&rate=4.945826978390308E-4]:1.445662062302E1,(((25[&rate=7.714005629904412E-4]:7.12550777749E1,(12[&rate=7.443969548779341E-4]:6.87745114636E1,((((30[&rate=6.83891413861116E-4]:5.088423345109E1,26[&rate=5.902236376060961E-4]:5.088423345109E1)[&rate=7.191503036201002E-4]:7.156662130316E0,32[&rate=5.612858341083541E-4]:5.80408955814E1)[&rate=3.443420289371486E-4]:9.013739526301E0,((((4[&rate=4.750694058842455E-4]:2.211549854431E0,2[&rate=5.232675439746676E-4]:2.211549854431E0)[&rate=5.04198996235163E-4]:1.023867703018E0,3[&rate=7.856857395394457E-4]:3.235417557449E0)[&rate=4.945826978390308E-4]:6.62809682164E0,5[&rate=5.327601649693369E-4]:9.863514379089E0)[&rate=8.324691260732271E-4]:2.261314411588E0,((7[&rate=5.422495019245131E-4]:7.796545146998E0,6[&rate=5.232675439746676E-4]:7.796545146998E0)[&rate=2.7810092155536266E-4]:8.089113329362E-1,1[&rate=5.708650353324601E-4]:8.605456479934E0)[&rate=5.708650353324601E-4]:3.519372310742E0)[&rate=4.6511683986574743E-4]:5.492980631703E1)[&rate=6.953399537750601E-4]:4.032382263064E-1,(16[&rate=4.5498959037579533E-4]:2.718970554384E1,((22[&rate=8.005745370988768E-4]:2.943123191659E0,21[&rate=6.83891413861116E-4]:2.943123191659E0)[&rate=9.29976637797089E-4]:4.512613601314E0,20[&rate=3.9997405759429814E-4]:7.455736792972E0)[&rate=0.0017356208513708254]:1.973396875087E1)[&rate=5.422495019245131E-4]:4.026816779017E1)[&rate=9.80230030884195E-4]:1.31663812959E0)[&rate=2.3256742836309826E-4]:2.480566311303E0)[&rate=6.199969092937593E-4]:1.46990167742E0,((((33[&rate=7.856857395394457E-4]:5.79046451352E1,13[&rate=6.510498229361851E-4]:5.79046451352E1)[&rate=7.070828532730283E-4]:7.562911530375E0,(11[&rate=0.0011211117316395488]:1.198267213858E1,29[&rate=6.000341301203619E-4]:1.198267213858E1)[&rate=5.80505802701599E-4]:5.348488452699E1)[&rate=2.7810092155536266E-4]:8.201712729785E-1,(19[&rate=9.80230030884195E-4]:1.631170234195E1,18[&rate=8.324691260732271E-4]:1.631170234195E1)[&rate=3.9997405759429814E-4]:4.99760255966E1)[&rate=4.340419550461394E-4]:3.555003785808E0,((10[&rate=0.001009187646930125]:1.697520171007E1,31[&rate=7.856857395394457E-4]:1.697520171007E1)[&rate=5.422495019245131E-4]:5.247849551922E1,23[&rate=5.902236376060961E-4]:6.94536972293E1)[&rate=5.902236376060961E-4]:3.890344950611E-1)[&rate=4.4464739193512455E-4]:2.882247727966E0)[&rate=0.0011722323855225948]:4.046771245813E0,(17[&rate=9.80230030884195E-4]:6.721653596457E1,(27[&rate=5.902236376060961E-4]:2.863537620662E1,28[&rate=9.80230030884195E-4]:2.863537620662E1)[&rate=7.315758371836021E-4]:3.858115975794E1)[&rate=4.848814993544608E-4]:9.555214733573E0)[&rate=0.0011722323855225948]:4.667121049474E1); +tree STATE_650000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55133.20772520713,EEF_ucld_branchRates=-266.168517335019,lnP=-55133.20772520713,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.31907037443765E-4]:9.310188108681E0,9[&rate=7.464940724621812E-4]:9.310188108681E0)[&rate=6.994068852668753E-4]:7.054794697681E0,15[&rate=4.709206598079352E-4]:1.636498280636E1)[&rate=9.184712638816922E-4]:9.561776760803E1,(14[&rate=0.0013501567192565152]:4.883320968868E1,24[&rate=8.91190645310154E-4]:4.883320968868E1)[&rate=9.484126310266342E-4]:6.314954072571E1)[&rate=3.8268859898976426E-4]:1.216477110584E1,(((25[&rate=6.196229223511821E-4]:7.240736938558E1,(12[&rate=7.817875317252599E-4]:7.167898416982E1,((((((4[&rate=3.8268859898976426E-4]:2.575161433195E0,2[&rate=4.709206598079352E-4]:2.575161433195E0)[&rate=7.817875317252599E-4]:7.543932883597E-1,3[&rate=0.0010189819260487665]:3.329554721555E0)[&rate=9.816315495645126E-4]:6.882735792676E0,5[&rate=3.8268859898976426E-4]:1.021229051423E1)[&rate=4.0273895556160546E-4]:2.392680297539E0,((7[&rate=2.1381223334186923E-4]:7.647270471261E0,6[&rate=5.205753598747845E-4]:7.647270471261E0)[&rate=3.511927247744368E-4]:1.006548837972E0,1[&rate=7.301056742377716E-4]:8.653819309234E0)[&rate=4.223724434056592E-4]:3.951151502536E0)[&rate=5.104555048072838E-4]:5.576858824116E1,((30[&rate=6.575730101139713E-4]:5.409356468835E1,26[&rate=3.9278124390482085E-4]:5.409356468835E1)[&rate=9.816315495645126E-4]:8.211210531924E0,32[&rate=4.514903201283676E-4]:6.230477522027E1)[&rate=5.517681846571264E-4]:6.068783832654E0)[&rate=6.994068852668753E-4]:9.034628969411E-1,(16[&rate=4.321004515490962E-4]:3.155329937168E1,((22[&rate=8.428796327905754E-4]:3.979855227707E0,21[&rate=3.401055777172308E-4]:3.979855227707E0)[&rate=4.6119137884459297E-4]:5.499897196664E0,20[&rate=5.104555048072838E-4]:9.479752424371E0)[&rate=0.001863812629118922]:2.207354694731E1)[&rate=5.104555048072838E-4]:3.772372257819E1)[&rate=7.63687193200328E-4]:2.401962219955E0)[&rate=4.223724434056592E-4]:7.283852157548E-1)[&rate=5.004464060314878E-4]:1.858408287174E0,((((33[&rate=5.959939182136668E-4]:6.06359176926E1,13[&rate=4.6119137884459297E-4]:6.06359176926E1)[&rate=5.412142908377678E-4]:7.515757969734E0,(11[&rate=5.205753598747845E-4]:1.256211394206E1,29[&rate=0.0011116308492828818]:1.256211394206E1)[&rate=8.91190645310154E-4]:5.558956172028E1)[&rate=0.001247631593556775]:9.810720030645E-1,(19[&rate=7.144348647340257E-4]:1.625139166194E1,18[&rate=5.205753598747845E-4]:1.625139166194E1)[&rate=4.6119137884459297E-4]:5.288135600346E1)[&rate=3.038168330976906E-4]:3.482609991816E0,((10[&rate=5.959939182136668E-4]:2.149554227376E1,31[&rate=6.445453936766546E-4]:2.149554227376E1)[&rate=3.8268859898976426E-4]:4.966149569272E1,23[&rate=4.905317292960758E-4]:7.115703796648E1)[&rate=2.3890591454246504E-4]:1.458319690742E0)[&rate=2.1381223334186923E-4]:1.650420015532E0)[&rate=2.7526563259061917E-4]:5.384408028482E0,(17[&rate=9.816315495645126E-4]:6.791971103695E1,(27[&rate=3.038168330976906E-4]:2.851980240215E1,28[&rate=0.0011116308492828818]:2.851980240215E1)[&rate=6.710289453989743E-4]:3.93999086348E1)[&rate=7.301056742377716E-4]:1.173047466428E1)[&rate=0.001863812629118922]:4.449733581901E1); +tree STATE_660000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.68739655675,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.68739655675,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.988538607391491E-4]:7.024342214358E0,9[&rate=7.009153157805899E-4]:7.024342214358E0)[&rate=4.5181624429853497E-4]:9.003140327165E0,15[&rate=3.449283064352021E-4]:1.602748254152E1)[&rate=0.0010072544430760229]:8.934508403545E1,(14[&rate=0.0010072544430760229]:4.90805368232E1,24[&rate=8.552635809385728E-4]:4.90805368232E1)[&rate=0.0012305637737759314]:5.629202975377E1)[&rate=3.073692923491352E-4]:2.185315880303E1,(((25[&rate=4.798860718454131E-4]:7.458189854885E1,((((33[&rate=9.606760653748602E-4]:6.152143560712E1,13[&rate=4.895285488224682E-4]:6.152143560712E1)[&rate=5.629210400979638E-4]:5.5557145816E0,(11[&rate=4.610459390566932E-4]:1.178150665505E1,29[&rate=6.249582452968421E-4]:1.178150665505E1)[&rate=7.789137316720762E-4]:5.529564353366E1)[&rate=4.426929798840149E-4]:1.306395590377E0,(19[&rate=3.3580202137335123E-4]:2.075924248776E1,18[&rate=1.84357192240398E-4]:2.075924248776E1)[&rate=3.539395002784733E-4]:4.762430329133E1)[&rate=3.449283064352021E-4]:3.87376104916E0,((10[&rate=5.516519041335968E-4]:2.186467115639E1,31[&rate=6.683427639437174E-4]:2.186467115639E1)[&rate=2.9737834726292864E-4]:4.95639444325E1,23[&rate=4.1581275596121485E-4]:7.142861558889E1)[&rate=4.0696618068121064E-4]:8.286912393702E-1)[&rate=3.805485506761696E-4]:2.324591720596E0)[&rate=6.532334346726354E-4]:7.719092182847E-1,(((((4[&rate=6.249582452968421E-4]:1.431525703305E0,2[&rate=5.629210400979638E-4]:1.431525703305E0)[&rate=2.647477951628196E-4]:9.379742611193E-1,3[&rate=4.0696618068121064E-4]:2.369499964424E0)[&rate=4.5181624429853497E-4]:8.084943452988E0,5[&rate=4.610459390566932E-4]:1.045444341741E1)[&rate=5.299942738400984E-4]:1.698044158194E0,((7[&rate=6.532334346726354E-4]:7.585484321459E0,6[&rate=5.864875008245588E-4]:7.585484321459E0)[&rate=2.0668320943112553E-4]:9.736185952605E-1,1[&rate=3.893506619132969E-4]:8.559102916719E0)[&rate=5.299942738400984E-4]:3.593384658888E0)[&rate=4.1581275596121485E-4]:6.022059286566E1,((((30[&rate=4.3366119451157585E-4]:5.538966673131E1,26[&rate=6.842047427131978E-4]:5.538966673131E1)[&rate=8.274634991344243E-4]:8.005296523748E0,32[&rate=3.981508591385736E-4]:6.339496325506E1)[&rate=4.1581275596121485E-4]:7.102891944163E0,(16[&rate=3.893506619132969E-4]:3.434880274462E1,((22[&rate=8.552635809385728E-4]:2.699097622169E0,21[&rate=2.3915657927218051E-4]:2.699097622169E0)[&rate=3.3580202137335123E-4]:5.641419505023E0,20[&rate=6.532334346726354E-4]:8.340517127192E0)[&rate=0.0017152880300573194]:2.600828561743E1)[&rate=9.208892287873354E-4]:3.61490524546E1)[&rate=1.84357192240398E-4]:1.578296321329E0,12[&rate=8.021576015962621E-4]:7.207615152055E1)[&rate=2.647477951628196E-4]:2.969289207181E-1)[&rate=3.539395002784733E-4]:2.980727325867E0)[&rate=9.208892287873354E-4]:3.667395173265E0,(17[&rate=7.574012483114577E-4]:6.993947247737E1,(27[&rate=4.426929798840149E-4]:2.844107385914E1,28[&rate=0.001134419975092282]:2.844107385914E1)[&rate=6.842047427131978E-4]:4.149839861823E1)[&rate=4.426929798840149E-4]:9.081730463034E0)[&rate=0.0017152880300573194]:4.820452243961E1); +tree STATE_670000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55116.853002459575,EEF_ucld_branchRates=-266.168517335019,lnP=-55116.853002459575,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.19027775760506E-4]:7.151761006601E0,9[&rate=8.339458387674147E-4]:7.151761006601E0)[&rate=8.929012203222385E-4]:9.702771409514E0,15[&rate=4.4190399242593044E-4]:1.685453241612E1)[&rate=0.0010062287226997005]:9.866399946306E1,(14[&rate=0.0010062287226997005]:5.498474019646E1,24[&rate=8.716057472016925E-4]:5.498474019646E1)[&rate=0.0011647254155173292]:6.053379168271E1)[&rate=5.436838109590337E-4]:1.112877697182E1,((((12[&rate=7.585932511312893E-4]:7.429709902079E1,((((((4[&rate=5.025190349667845E-4]:1.849037013371E0,2[&rate=3.519965909867006E-4]:1.849037013371E0)[&rate=5.10790926749044E-4]:4.45488133253E-1,3[&rate=8.339458387674147E-4]:2.294525146624E0)[&rate=6.294872922169767E-4]:8.792296115062E0,5[&rate=4.687072076969679E-4]:1.108682126169E1)[&rate=4.687072076969679E-4]:8.172446242302E-1,((7[&rate=4.94194779947634E-4]:6.681907049146E0,6[&rate=7.457059656869735E-4]:6.681907049146E0)[&rate=5.519322660294351E-4]:1.556381792263E0,1[&rate=6.882387483500263E-4]:8.238288841409E0)[&rate=8.716057472016925E-4]:3.665777044507E0)[&rate=6.882387483500263E-4]:5.862825823988E1,((30[&rate=6.989607482544537E-4]:5.606199711779E1,26[&rate=6.578220754550819E-4]:5.606199711779E1)[&rate=4.85799201441263E-4]:7.126965232425E0,32[&rate=4.4190399242593044E-4]:6.318896235022E1)[&rate=6.294872922169767E-4]:7.343361775574E0)[&rate=7.457059656869735E-4]:2.636627617638E0,(16[&rate=4.127265001220577E-4]:3.367437726641E1,((22[&rate=7.333533059950068E-4]:3.230138594103E0,21[&rate=5.519322660294351E-4]:3.230138594103E0)[&rate=6.481761322256923E-4]:4.906072889496E0,20[&rate=6.578220754550819E-4]:8.1362114836E0)[&rate=0.0014845129147848363]:2.553816578281E1)[&rate=0.0010062287226997005]:3.949457447702E1)[&rate=5.60218346827851E-4]:1.128147277362E0)[&rate=2.910563372861836E-4]:1.47756025974E0,25[&rate=5.272456236471697E-4]:7.577465928053E1)[&rate=4.127265001220577E-4]:1.036074702344E0,((((11[&rate=9.424482183480263E-4]:1.39427857057E1,29[&rate=5.68555331330826E-4]:1.39427857057E1)[&rate=7.862563015172847E-4]:5.618799693979E1,(33[&rate=5.68555331330826E-4]:6.272784883006E1,13[&rate=3.357766957525166E-4]:6.272784883006E1)[&rate=8.929012203222385E-4]:7.40293381542E0)[&rate=5.354595284002911E-4]:7.676357791605E-1,(19[&rate=5.85435163147481E-4]:2.05535233292E1,18[&rate=5.436838109590337E-4]:2.05535233292E1)[&rate=4.3251317628816103E-4]:5.034489509545E1)[&rate=5.436838109590337E-4]:3.506450300416E0,((10[&rate=4.599599543009219E-4]:2.586632148093E1,31[&rate=5.940050433300726E-4]:2.586632148093E1)[&rate=3.662427709572492E-4]:4.778350900037E1,23[&rate=5.354595284002911E-4]:7.36498304813E1)[&rate=3.910283752928945E-4]:7.550382437615E-1)[&rate=2.910563372861836E-4]:2.405865257815E0)[&rate=7.100275030143265E-4]:4.40215154427E0,(17[&rate=9.424482183480263E-4]:6.784034269203E1,(27[&rate=7.333533059950068E-4]:2.81106481907E1,28[&rate=0.0010975270180451462]:2.81106481907E1)[&rate=7.585932511312893E-4]:3.972969450133E1)[&rate=5.19027775760506E-4]:1.337254283511E1)[&rate=0.0014845129147848363]:4.543442332385E1); +tree STATE_680000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55134.13698356159,EEF_ucld_branchRates=-266.168517335019,lnP=-55134.13698356159,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.332472471567112E-4]:5.612414519731E0,9[&rate=7.612026443442311E-4]:5.612414519731E0)[&rate=6.253461333386901E-4]:9.334370180208E0,15[&rate=5.693168509780758E-4]:1.494678469994E1)[&rate=8.25556616574421E-4]:9.503868160394E1,(14[&rate=0.0010448395716731438]:5.119257774212E1,24[&rate=9.095375605533825E-4]:5.119257774212E1)[&rate=0.0011233137205841838]:5.879288856176E1)[&rate=8.377801459054232E-4]:1.060386730096E1,((((((((30[&rate=6.332472471567112E-4]:5.456830566494E1,26[&rate=6.814393212363921E-4]:5.456830566494E1)[&rate=5.167497348502066E-4]:5.869295112146E0,32[&rate=6.095403272488133E-4]:6.043760077708E1)[&rate=6.981106415195324E-4]:3.790776508058E0,12[&rate=8.25556616574421E-4]:6.422837728514E1)[&rate=7.612026443442311E-4]:2.660448622945E0,((((4[&rate=9.457548269443211E-4]:1.748036562711E0,2[&rate=7.066216470588544E-4]:1.748036562711E0)[&rate=0.0010151374651013207]:8.725074397986E-1,3[&rate=6.332472471567112E-4]:2.620544002509E0)[&rate=0.0010799839284053791]:8.069073784706E0,5[&rate=6.411646727316668E-4]:1.068961778722E1)[&rate=6.65141374041599E-4]:2.224676128487E0,((7[&rate=5.439527917735532E-4]:6.966466138835E0,6[&rate=4.96961030345272E-4]:6.966466138835E0)[&rate=5.610103027021635E-4]:1.356697230666E0,1[&rate=5.26088573747355E-4]:8.3231633695E0)[&rate=4.18407862950198E-4]:4.591130546202E0)[&rate=6.570991697686061E-4]:5.397453199239E1)[&rate=6.253461333386901E-4]:7.483798742747E-1,(16[&rate=7.422113485097415E-4]:3.201273273341E1,((22[&rate=9.89317456409471E-4]:2.86933318254E0,21[&rate=8.025884139395248E-4]:2.86933318254E0)[&rate=7.330461474894216E-4]:2.966289012642E0,20[&rate=0.0010151374651013207]:5.835622195182E0)[&rate=0.001445026085465548]:2.617711053823E1)[&rate=8.138453982233932E-4]:3.562447304895E1)[&rate=8.377801459054232E-4]:5.505723503879E0,25[&rate=6.174483191097787E-4]:7.314292928624E1)[&rate=6.570991697686061E-4]:2.522385057339E-1,((((33[&rate=9.457548269443211E-4]:6.291532479974E1,13[&rate=3.981801882847746E-4]:6.291532479974E1)[&rate=8.933919433079631E-4]:7.078262040493E0,(11[&rate=5.936364171326701E-4]:1.132788047054E1,29[&rate=0.0011233137205841838]:1.132788047054E1)[&rate=5.775093086208648E-4]:5.86657063697E1)[&rate=4.96961030345272E-4]:6.543065772144E-1,(19[&rate=6.016080271409667E-4]:2.111509591904E1,18[&rate=6.016080271409667E-4]:2.111509591904E1)[&rate=5.439527917735532E-4]:4.953279749841E1)[&rate=9.095375605533825E-4]:8.901840504656E-1,((10[&rate=4.498329753146973E-4]:2.207065111306E1,31[&rate=7.152699544846073E-4]:2.207065111306E1)[&rate=3.981801882847746E-4]:4.844434721424E1,23[&rate=4.750783383101788E-4]:7.05149983273E1)[&rate=4.351947106715141E-4]:1.023079140619E0)[&rate=5.26088573747355E-4]:1.857090324061E0)[&rate=6.174483191097787E-4]:5.593046603639E0,(17[&rate=7.422113485097415E-4]:7.004380804552E1,(27[&rate=7.710782572395897E-4]:2.611662274616E1,28[&rate=8.933919433079631E-4]:2.611662274616E1)[&rate=8.138453982233932E-4]:4.392718529936E1)[&rate=6.016080271409667E-4]:8.94440635009E0)[&rate=0.001445026085465548]:4.160111920923E1); +tree STATE_690000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55135.64955987243,EEF_ucld_branchRates=-266.168517335019,lnP=-55135.64955987243,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.07470144182548E-4]:7.323558200817E0,9[&rate=6.763026176976381E-4]:7.323558200817E0)[&rate=5.562533804352101E-4]:8.692903106947E0,15[&rate=6.455003191862226E-4]:1.601646130776E1)[&rate=9.80269815348712E-4]:9.552228902723E1,(14[&rate=8.274923124460559E-4]:5.633686831369E1,24[&rate=9.170105640541827E-4]:5.633686831369E1)[&rate=0.00107095156162089]:5.520188202131E1)[&rate=3.204658354432158E-4]:1.780589402838E1,((((((16[&rate=4.2392664255340846E-4]:3.441065580431E1,((22[&rate=6.3577557473739E-4]:2.804750037814E0,21[&rate=7.351271933418036E-4]:2.804750037814E0)[&rate=3.3624277262017763E-4]:4.14465589053E0,20[&rate=6.3577557473739E-4]:6.949405928345E0)[&rate=0.001456775635178059]:2.746124987596E1)[&rate=0.00107095156162089]:3.716314562271E1,((((4[&rate=5.645819020179279E-4]:1.835006833478E0,2[&rate=9.80269815348712E-4]:1.835006833478E0)[&rate=4.5855425480294243E-4]:1.286024718787E0,3[&rate=5.316858515991581E-4]:3.121031552265E0)[&rate=3.9543045805722036E-4]:9.101498851632E0,5[&rate=6.657356172365045E-4]:1.22225304039E1)[&rate=0.0010207011566066885]:1.885643156881E0,((7[&rate=2.770428149852224E-4]:9.179522438297E0,6[&rate=4.501351067006151E-4]:9.179522438297E0)[&rate=3.0164112204453394E-4]:1.885933331409E0,1[&rate=3.9543045805722036E-4]:1.106545576971E1)[&rate=5.815284260858559E-4]:3.042717791072E0)[&rate=6.169911033089532E-4]:5.746562786624E1)[&rate=7.1021823786281E-4]:1.166901692818E-1,(((30[&rate=7.224069377422487E-4]:5.517570068402E1,26[&rate=5.316858515991581E-4]:5.517570068402E1)[&rate=9.80269815348712E-4]:7.813541174672E0,32[&rate=5.316858515991581E-4]:6.298924185869E1)[&rate=5.155250493261968E-4]:8.424927131234E0,12[&rate=7.624452787734232E-4]:7.141416898993E1)[&rate=4.750831823219677E-4]:2.76322606371E-1)[&rate=5.07470144182548E-4]:6.321594454193E0,25[&rate=4.994137214524497E-4]:7.801208605049E1)[&rate=8.468412016787271E-4]:1.833790874924E0,((((11[&rate=6.763026176976381E-4]:1.134567618164E1,29[&rate=7.484466305116767E-4]:1.134567618164E1)[&rate=5.645819020179279E-4]:6.22075126994E1,(19[&rate=8.095820183578496E-4]:1.609344649784E1,18[&rate=5.398184525346335E-4]:1.609344649784E1)[&rate=4.2392664255340846E-4]:5.74597423832E1)[&rate=8.67923499368863E-4]:1.733155554508E-1,(33[&rate=7.351271933418036E-4]:6.108540116878E1,13[&rate=4.147511484421537E-4]:6.108540116878E1)[&rate=3.50111144442377E-4]:1.26411032677E1)[&rate=5.989563912626748E-4]:3.257033020261E0,((10[&rate=5.155250493261968E-4]:2.372983491454E1,31[&rate=5.989563912626748E-4]:2.372983491454E1)[&rate=3.50111144442377E-4]:5.175573612602E1,23[&rate=4.5855425480294243E-4]:7.548557104056E1)[&rate=8.468412016787271E-4]:1.497966416183E0)[&rate=4.994137214524497E-4]:2.86233946867E0)[&rate=5.398184525346335E-4]:1.880778254438E0,(17[&rate=8.095820183578496E-4]:6.723723323127E1,(27[&rate=4.994137214524497E-4]:2.718465098333E1,28[&rate=7.351271933418036E-4]:2.718465098333E1)[&rate=5.398184525346335E-4]:4.005258224794E1)[&rate=4.4157878795609857E-4]:1.448942194858E1)[&rate=0.001456775635178059]:4.761798918352E1); +tree STATE_700000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55140.12830808416,EEF_ucld_branchRates=-266.168517335019,lnP=-55140.12830808416,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.293942299771784E-4]:6.816364599765E0,9[&rate=5.196975043747654E-4]:6.816364599765E0)[&rate=2.674138220563884E-4]:7.654489755273E0,15[&rate=3.407831210641199E-4]:1.447085435504E1)[&rate=6.39581599237331E-4]:1.130851625524E2,(14[&rate=0.0013343378712252069]:5.539399529597E1,24[&rate=8.014029573794604E-4]:5.539399529597E1)[&rate=0.0010372421572314382]:7.216202161146E1)[&rate=3.740652705474283E-4]:9.307958352048E-2,((((((((30[&rate=6.548425724997632E-4]:5.146720287354E1,26[&rate=5.697511797718277E-4]:5.146720287354E1)[&rate=4.960412129420249E-4]:9.487161916014E0,32[&rate=3.740652705474283E-4]:6.095436478956E1)[&rate=4.844810731379266E-4]:9.395336427641E0,((((4[&rate=4.285868132786726E-4]:1.871957677264E0,2[&rate=5.077733158983972E-4]:1.871957677264E0)[&rate=5.442069725392251E-4]:1.09632119475E0,3[&rate=7.59618586734916E-4]:2.968278872014E0)[&rate=6.39581599237331E-4]:1.050343362166E1,5[&rate=3.6307833570352213E-4]:1.347171249367E1)[&rate=4.5063917928104364E-4]:2.019692579507E0,((7[&rate=1.7599404725414296E-4]:1.124698012643E1,6[&rate=3.058676607475147E-4]:1.124698012643E1)[&rate=8.014029573794604E-4]:8.586647808439E-1,1[&rate=3.293942299771784E-4]:1.210564490727E1)[&rate=0.0012531386026804745]:3.385760165906E0)[&rate=6.548425724997632E-4]:5.485829614402E1)[&rate=9.309699120966503E-4]:2.550499686106E-1,(16[&rate=4.176554362956887E-4]:3.281475653019E1,((22[&rate=0.0015795291953981745]:2.508598142633E0,21[&rate=9.983681784715326E-4]:2.508598142633E0)[&rate=7.040196388765956E-4]:4.188475478672E0,20[&rate=8.24071427581383E-4]:6.697073621305E0)[&rate=0.0013343378712252069]:2.611768290888E1)[&rate=0.0014377621960842033]:3.778999465562E1)[&rate=0.0010372421572314382]:3.687210002304E-1,12[&rate=9.013121545304382E-4]:7.097347218604E1)[&rate=5.96536511950492E-4]:3.581942776324E0,25[&rate=8.014029573794604E-4]:7.455541496236E1)[&rate=3.958792881155606E-4]:3.35022324795E0,((((33[&rate=0.0011297835690382268]:6.221225888005E1,13[&rate=4.617990584158785E-4]:6.221225888005E1)[&rate=1.7599404725414296E-4]:8.418930414773E0,(11[&rate=7.040196388765956E-4]:1.771820212437E1,29[&rate=5.96536511950492E-4]:1.771820212437E1)[&rate=4.844810731379266E-4]:5.291298717046E1)[&rate=2.2066154829021882E-4]:3.957305261917E0,(19[&rate=5.697511797718277E-4]:1.329454069437E1,18[&rate=4.617990584158785E-4]:1.329454069437E1)[&rate=3.407831210641199E-4]:6.129395386237E1)[&rate=4.0676016475723665E-4]:1.769510318106E0,((10[&rate=7.79965345058882E-4]:2.037012771553E1,31[&rate=8.24071427581383E-4]:2.037012771553E1)[&rate=2.674138220563884E-4]:5.44909536655E1,23[&rate=4.730733885443166E-4]:7.486108138102E1)[&rate=4.176554362956887E-4]:1.496923493825E0)[&rate=2.5317138230556964E-4]:1.547633335468E0)[&rate=5.318347257969951E-4]:2.121762994453E0,(17[&rate=0.0010806460762413238]:6.715777148381E1,(27[&rate=4.730733885443166E-4]:2.51073880265E1,28[&rate=0.0013343378712252069]:2.51073880265E1)[&rate=9.983681784715326E-4]:4.205038345731E1)[&rate=4.5063917928104364E-4]:1.286962972096E1)[&rate=0.0018026679720760691]:4.762169528618E1); +tree STATE_710000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55136.94839027386,EEF_ucld_branchRates=-266.168517335019,lnP=-55136.94839027386,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=1.5264523620499399E-4]:9.383995598303E0,9[&rate=9.795359406460761E-4]:9.383995598303E0)[&rate=6.526072955499941E-4]:8.406820106849E0,15[&rate=2.3663802381092256E-4]:1.779081570515E1)[&rate=7.265686434551246E-4]:9.730282565986E1,(14[&rate=0.0013792077821067046]:5.38748828709E1,24[&rate=3.9837097021466755E-4]:5.38748828709E1)[&rate=0.0012754199801798254]:6.121875849411E1)[&rate=0.0011942040480086176]:1.055709318722E1,((((((((30[&rate=8.746291561706587E-4]:5.097770373141E1,26[&rate=5.620304956146482E-4]:5.097770373141E1)[&rate=3.0509119811729786E-4]:1.357352057639E1,32[&rate=3.672628313485821E-4]:6.455122430781E1)[&rate=4.411213877214281E-4]:8.582235880608E0,((((4[&rate=5.355331656074953E-4]:1.892267484751E0,2[&rate=4.411213877214281E-4]:1.892267484751E0)[&rate=4.7478145624928046E-4]:9.599344480521E-1,3[&rate=6.360894533963673E-4]:2.852201932803E0)[&rate=5.620304956146482E-4]:1.080116272668E1,5[&rate=3.363878402726114E-4]:1.365336465948E1)[&rate=3.9837097021466755E-4]:2.966776603241E0,((7[&rate=1.5264523620499399E-4]:1.072263847876E1,6[&rate=4.195033508882124E-4]:1.072263847876E1)[&rate=6.202120712477371E-4]:1.168679985749E0,1[&rate=1.934745878223176E-4]:1.189131846451E1)[&rate=4.982728882192181E-4]:4.728822798219E0)[&rate=7.47510259493329E-4]:5.651331892569E1)[&rate=2.944146780090016E-4]:1.141815083548E0,(16[&rate=4.0888549512696287E-4]:3.532462801836E1,((22[&rate=0.0015220516990058562]:2.001437142614E0,21[&rate=7.696834942286057E-4]:2.001437142614E0)[&rate=2.835427008335132E-4]:4.10427317892E0,20[&rate=2.7241640259613724E-4]:6.105710321534E0)[&rate=0.0013792077821067046]:2.921891769683E1)[&rate=0.0010225339004177726]:3.89506472536E1)[&rate=0.0012754199801798254]:1.441523744206E0,12[&rate=6.878398483473545E-4]:7.571679901617E1)[&rate=2.3663802381092256E-4]:2.482493146663E0,25[&rate=5.901512271305364E-4]:7.819929216283E1)[&rate=6.049166161331998E-4]:4.125134919483E0,((((33[&rate=8.454522032095787E-4]:6.661072593952E1,13[&rate=3.7757860715946593E-4]:6.661072593952E1)[&rate=5.228101344633892E-4]:7.392634913597E0,(11[&rate=3.466901124492247E-4]:2.183817503989E1,29[&rate=3.0509119811729786E-4]:2.183817503989E1)[&rate=0.0010225339004177726]:5.216518581323E1)[&rate=4.3024260496510146E-4]:3.257324929182E0,(19[&rate=9.795359406460761E-4]:1.475512806635E1,18[&rate=4.411213877214281E-4]:1.475512806635E1)[&rate=2.092186584114861E-4]:6.250555771594E1)[&rate=3.466901124492247E-4]:3.325626456442E0,((10[&rate=4.8640805017986793E-4]:2.295224864895E1,31[&rate=4.195033508882124E-4]:2.295224864895E1)[&rate=4.6337160943241823E-4]:5.598453144754E1,23[&rate=4.195033508882124E-4]:7.893678009649E1)[&rate=7.696834942286057E-4]:1.649532142249E0)[&rate=9.410986647866771E-4]:1.738114843579E0)[&rate=3.672628313485821E-4]:4.128021293452E0,(17[&rate=7.47510259493329E-4]:7.690907525761E1,(27[&rate=3.260409656077729E-4]:3.571282683847E1,28[&rate=0.0011276364333469846]:3.571282683847E1)[&rate=7.696834942286057E-4]:4.119624841914E1)[&rate=5.228101344633892E-4]:9.543373118158E0)[&rate=0.001748116507259186]:3.919828617646E1); +tree STATE_720000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55128.449442100624,EEF_ucld_branchRates=-266.168517335019,lnP=-55128.449442100624,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.122660436130877E-4]:7.987473394883E0,9[&rate=9.771861944124702E-4]:7.987473394883E0)[&rate=6.775720828529747E-4]:8.167479803901E0,15[&rate=4.048608669707068E-4]:1.615495319878E1)[&rate=7.78249003540209E-4]:9.549021839584E1,(14[&rate=0.0010836199908987143]:5.548151312923E1,24[&rate=6.351246101292864E-4]:5.548151312923E1)[&rate=0.0011321717012223557]:5.616365846539E1)[&rate=9.24628418546089E-4]:9.232637674406E0,((((((((30[&rate=6.558894411540506E-4]:4.806382557869E1,26[&rate=7.003726153558904E-4]:4.806382557869E1)[&rate=8.805943734241041E-4]:1.407505222677E1,32[&rate=4.5634379674816224E-4]:6.213887780546E1)[&rate=5.12369495881262E-4]:5.491859941555E0,((((4[&rate=6.250325813047821E-4]:1.919730807118E0,2[&rate=4.2635643830718376E-4]:1.919730807118E0)[&rate=0.0011927407179625966]:1.466268896166E0,3[&rate=5.306342583559047E-4]:3.385999703284E0)[&rate=7.503624575416684E-4]:9.70730948948E0,5[&rate=4.3659469751538817E-4]:1.309330919276E1)[&rate=5.39774200309477E-4]:3.167729272628E0,((7[&rate=2.7525386722878714E-4]:9.981186868592E0,6[&rate=5.39774200309477E-4]:9.981186868592E0)[&rate=8.087163422971865E-4]:1.278003156962E0,1[&rate=3.6861330731481184E-4]:1.125919002555E1)[&rate=6.558894411540506E-4]:5.001848439838E0)[&rate=5.39774200309477E-4]:5.136969928162E1)[&rate=5.39774200309477E-4]:8.679922195849E-1,(16[&rate=5.767481351195162E-4]:3.07725554414E1,((22[&rate=5.861701835333398E-4]:2.041324846431E0,21[&rate=3.6861330731481184E-4]:2.041324846431E0)[&rate=5.956937770891632E-4]:3.479519748464E0,20[&rate=9.771861944124702E-4]:5.520844594895E0)[&rate=0.0011927407179625966]:2.525171084651E1)[&rate=0.0012736716063847962]:3.77261745252E1)[&rate=5.581481691225665E-4]:2.740560999286E0,12[&rate=7.78249003540209E-4]:7.123929096588E1)[&rate=9.49617178305027E-4]:2.578317745294E0,25[&rate=4.8474690679065427E-4]:7.381760871118E1)[&rate=3.223356328067485E-4]:2.64565775828E0,((((33[&rate=8.087163422971865E-4]:6.157750189521E1,13[&rate=3.018539725401538E-4]:6.157750189521E1)[&rate=7.931207578904385E-4]:9.612810214637E0,(11[&rate=5.489404149582388E-4]:1.965424884791E1,29[&rate=6.250325813047821E-4]:1.965424884791E1)[&rate=6.88818588625386E-4]:5.153606326193E1)[&rate=5.215048414311662E-4]:2.221102908027E0,(19[&rate=4.4657482960466837E-4]:1.432929494957E1,18[&rate=5.581481691225665E-4]:1.432929494957E1)[&rate=4.7539886854118665E-4]:5.90821200683E1)[&rate=8.609146969595136E-4]:1.290035662957E0,((10[&rate=5.032108006595401E-4]:2.251091474172E1,31[&rate=5.215048414311662E-4]:2.251091474172E1)[&rate=3.3957997155710745E-4]:5.180104156767E1,23[&rate=4.8474690679065427E-4]:7.431195630939E1)[&rate=0.0011321717012223557]:3.894943714395E-1)[&rate=9.24628418546089E-4]:1.761815788632E0)[&rate=4.4657482960466837E-4]:3.771380795396E0,(17[&rate=8.087163422971865E-4]:6.510416438206E1,(27[&rate=4.1580252822359643E-4]:2.866092527185E1,28[&rate=9.771861944124702E-4]:2.866092527185E1)[&rate=7.372181493919939E-4]:3.644323911021E1)[&rate=6.351246101292864E-4]:1.51304828828E1)[&rate=0.0013967572480254725]:4.064316200417E1); +tree STATE_730000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55123.37394567937,EEF_ucld_branchRates=-266.168517335019,lnP=-55123.37394567937,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.056207646375152E-4]:9.772763263451E0,9[&rate=3.9386452771739914E-4]:9.772763263451E0)[&rate=8.03683225666364E-4]:5.91530153699E0,15[&rate=6.570132708961053E-4]:1.568806480044E1)[&rate=9.456972790660324E-4]:9.771839965632E1,(14[&rate=8.20454508745269E-4]:5.528511655884E1,24[&rate=8.568357154453524E-4]:5.528511655884E1)[&rate=0.0013282343529626164]:5.812134789793E1)[&rate=0.001172273271174271]:1.524164513488E1,(((((((16[&rate=4.370360193245177E-4]:3.701482826609E1,((22[&rate=0.0011190244156028275]:2.219804977653E0,21[&rate=5.343497754586013E-4]:2.219804977653E0)[&rate=5.732500939869981E-4]:3.74139214294E0,20[&rate=4.6701189759304425E-4]:5.961197120592E0)[&rate=0.0012388958067284322]:3.10536311455E1)[&rate=9.728269241164533E-4]:3.197296049703E1,((((4[&rate=0.0012388958067284322]:1.82315039109E0,2[&rate=8.20454508745269E-4]:1.82315039109E0)[&rate=6.920510144562875E-4]:1.779621838518E0,3[&rate=0.0010363751804382398]:3.602772229607E0)[&rate=6.034301986111373E-4]:1.03193149202E1,5[&rate=3.424072001248378E-4]:1.392208714981E1)[&rate=0.0010028081044134356]:2.046303940137E0,((7[&rate=2.6158656201888625E-4]:1.048482217723E1,6[&rate=5.151874570961343E-4]:1.048482217723E1)[&rate=4.6701189759304425E-4]:1.28564912282E0,1[&rate=5.343497754586013E-4]:1.177047130004E1)[&rate=8.20454508745269E-4]:4.197919789903E0)[&rate=5.343497754586013E-4]:5.301939767318E1)[&rate=5.247580967153683E-4]:8.738783181674E-1,((30[&rate=7.301688519266929E-4]:4.574595455973E1,26[&rate=4.370360193245177E-4]:4.574595455973E1)[&rate=7.043692377553114E-4]:1.571399784132E1,32[&rate=4.160791525707901E-4]:6.145995240105E1)[&rate=5.53661520630715E-4]:8.401714680237E0)[&rate=4.6701189759304425E-4]:1.140598745579E0,12[&rate=7.437332018477281E-4]:7.100226582687E1)[&rate=2.6158656201888625E-4]:2.315096525538E0,25[&rate=8.03683225666364E-4]:7.331736235241E1)[&rate=3.5656813789722747E-4]:3.375069248454E0,((((33[&rate=6.570132708961053E-4]:6.38321495723E1,13[&rate=3.5656813789722747E-4]:6.38321495723E1)[&rate=5.343497754586013E-4]:6.719833087188E0,(11[&rate=5.932421268398473E-4]:2.159772384758E1,29[&rate=5.634133392863403E-4]:2.159772384758E1)[&rate=6.242770952549135E-4]:4.895425881191E1)[&rate=5.83187637131438E-4]:2.32869868433E0,(19[&rate=8.568357154453524E-4]:1.294358810079E1,18[&rate=7.578051453100227E-4]:1.294358810079E1)[&rate=3.2685383727471814E-4]:5.993709324304E1)[&rate=5.439789196912692E-4]:1.329822536213E0,((10[&rate=6.570132708961053E-4]:2.418216625765E1,31[&rate=6.800726754237616E-4]:2.418216625765E1)[&rate=4.0516349734695924E-4]:4.94541818067E1,23[&rate=4.471825930117107E-4]:7.363634806435E1)[&rate=5.056207646375152E-4]:5.741558156816E-1)[&rate=9.456972790660324E-4]:2.481927720826E0)[&rate=4.864258789790108E-4]:3.369536486002E0,(17[&rate=9.728269241164533E-4]:6.712371123121E1,(27[&rate=4.2668400806696364E-4]:3.100607197028E1,28[&rate=8.03683225666364E-4]:3.100607197028E1)[&rate=6.349732212603672E-4]:3.611763926093E1)[&rate=9.728269241164533E-4]:1.293825685565E1)[&rate=0.0013282343529626164]:4.858614150478E1); +tree STATE_740000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55123.3913407341,EEF_ucld_branchRates=-266.168517335019,lnP=-55123.3913407341,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.631925291606792E-4]:9.497007088047E0,9[&rate=5.809005039962499E-4]:9.497007088047E0)[&rate=8.609690262951109E-4]:5.219908811648E0,15[&rate=4.8534906312411926E-4]:1.471691589969E1)[&rate=6.959624691764749E-4]:9.143564111201E1,(14[&rate=8.799508958910943E-4]:4.947860433574E1,24[&rate=7.933012085614829E-4]:4.947860433574E1)[&rate=0.001463429763019754]:5.667395267596E1)[&rate=8.799508958910943E-4]:1.677483719418E1,((((((((((4[&rate=0.0010876603442605205]:2.552006355976E0,2[&rate=3.329801746908048E-4]:2.552006355976E0)[&rate=4.636155659974567E-4]:9.906171531159E-1,3[&rate=5.278118964155206E-4]:3.542623509092E0)[&rate=6.959624691764749E-4]:8.992425650154E0,5[&rate=4.960496021021578E-4]:1.253504915925E1)[&rate=5.383621483325547E-4]:2.16036645658E0,((7[&rate=3.7924598765910744E-4]:1.115483783249E1,6[&rate=4.1774215539665873E-4]:1.115483783249E1)[&rate=6.248350655625826E-4]:6.671922516268E-1,1[&rate=4.5251529414531933E-4]:1.182203008411E1)[&rate=3.650222457002848E-4]:2.873385531712E0)[&rate=5.595273205593947E-4]:5.058283196675E1,((30[&rate=8.609690262951109E-4]:4.753026502701E1,26[&rate=6.248350655625826E-4]:4.753026502701E1)[&rate=9.940618418373397E-4]:1.002129020563E1,32[&rate=4.8534906312411926E-4]:5.755155523264E1)[&rate=3.650222457002848E-4]:7.726692349934E0)[&rate=0.0010533538565948646]:1.394930303989E0,(16[&rate=2.631925291606792E-4]:2.971678563085E1,((22[&rate=7.490337605620428E-4]:2.146870738631E0,21[&rate=3.9266242000055425E-4]:2.146870738631E0)[&rate=0.001282608922025308]:2.891955215943E0,20[&rate=5.595273205593947E-4]:5.038825954573E0)[&rate=0.001359696122894222]:2.467795967627E1)[&rate=0.0010876603442605205]:3.695639225572E1)[&rate=9.212014743230491E-4]:2.398546845117E0,12[&rate=0.0010533538565948646]:6.907172473168E1)[&rate=6.248350655625826E-4]:1.439458199469E0,25[&rate=8.429097812907007E-4]:7.051118293115E1)[&rate=0.0016227031378053948]:9.96705956723E-1,((((11[&rate=6.47685421961946E-4]:1.745055929388E1,29[&rate=4.8534906312411926E-4]:1.745055929388E1)[&rate=5.595273205593947E-4]:4.939715913818E1,(33[&rate=0.0011700200410981112]:5.568694965714E1,13[&rate=4.2963458101015863E-4]:5.568694965714E1)[&rate=4.4120511295859047E-4]:1.116076877491E1)[&rate=7.087077216644496E-4]:1.251962502506E0,(19[&rate=5.701790298417351E-4]:1.329749071987E1,18[&rate=8.799508958910943E-4]:1.329749071987E1)[&rate=5.172572967162709E-4]:5.48021902147E1)[&rate=4.5251529414531933E-4]:1.960607907622E0,((10[&rate=7.490337605620428E-4]:2.542764416248E1,31[&rate=7.780320262841924E-4]:2.542764416248E1)[&rate=5.595273205593947E-4]:4.421142421141E1,23[&rate=6.026226748495655E-4]:6.963906837388E1)[&rate=5.278118964155206E-4]:4.212204683025E-1)[&rate=7.352091106444092E-4]:1.447600045685E0)[&rate=0.0011261380655656773]:1.988238484829E0,(17[&rate=0.0010223611320970074]:5.924186196691E1,(27[&rate=6.026226748495655E-4]:3.163049104084E1,28[&rate=8.799508958910943E-4]:3.163049104084E1)[&rate=7.933012085614829E-4]:2.761137092607E1)[&rate=6.593993448582895E-4]:1.425426540579E1)[&rate=0.001282608922025308]:4.943126683318E1); +tree STATE_750000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55132.68507874516,EEF_ucld_branchRates=-266.168517335019,lnP=-55132.68507874516,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.758058457353949E-4]:8.955668561954E0,9[&rate=6.631741946122945E-4]:8.955668561954E0)[&rate=4.573350758489119E-4]:5.898816585764E0,15[&rate=4.759871500750643E-4]:1.485448514772E1)[&rate=7.945340957059258E-4]:9.380501078005E1,(14[&rate=8.38589652933589E-4]:4.449291706563E1,24[&rate=9.354449400578019E-4]:4.449291706563E1)[&rate=9.608383499970157E-4]:6.416657886214E1)[&rate=0.0011757341926410616]:1.781724789846E1,(((25[&rate=6.820473462344158E-4]:7.31747700533E1,(((((((4[&rate=4.154266937654352E-4]:2.610328575045E0,2[&rate=4.759871500750643E-4]:2.610328575045E0)[&rate=0.0012731390146388081]:1.249421705328E0,3[&rate=6.103179253799095E-4]:3.859750280374E0)[&rate=8.727909142795875E-4]:8.991156234857E0,5[&rate=4.033704793154663E-4]:1.285090651523E1)[&rate=5.852348831588415E-4]:2.180385512041E0,((7[&rate=5.687594763393808E-4]:1.016825601032E1,6[&rate=4.759871500750643E-4]:1.016825601032E1)[&rate=7.945340957059258E-4]:1.934958949876E-1,1[&rate=5.935333782346822E-4]:1.036175190531E1)[&rate=4.2670378756619494E-4]:4.669540121965E0)[&rate=6.631741946122945E-4]:5.124103130833E1,((30[&rate=6.361667945953099E-4]:4.670481788035E1,26[&rate=8.084302908223347E-4]:4.670481788035E1)[&rate=5.769813236975734E-4]:8.034916971036E0,32[&rate=5.276382043475137E-4]:5.473973485139E1)[&rate=5.10891630405812E-4]:1.153258848421E1)[&rate=6.361667945953099E-4]:3.043867289032E0,(16[&rate=5.687594763393808E-4]:3.156305189163E1,((22[&rate=7.564992369646577E-4]:2.590103984927E0,21[&rate=7.226450443757622E-4]:2.590103984927E0)[&rate=9.608383499970157E-4]:3.187402419238E0,20[&rate=5.60555904900648E-4]:5.777506404165E0)[&rate=0.0011757341926410616]:2.578554548746E1)[&rate=7.335468998198809E-4]:3.7753138733E1)[&rate=5.35913626117201E-4]:3.769286160875E0,12[&rate=8.918716859079243E-4]:7.30854767855E1)[&rate=5.935333782346822E-4]:8.929326780076E-2)[&rate=4.759871500750643E-4]:9.850089175227E-1,((((11[&rate=3.3949671743888353E-4]:1.742154995075E1,29[&rate=6.018899743462611E-4]:1.742154995075E1)[&rate=9.354449400578019E-4]:5.117986570973E1,(33[&rate=7.686402084697027E-4]:5.297330864847E1,13[&rate=4.937443630127629E-4]:5.297330864847E1)[&rate=5.02379823772891E-4]:1.5628107012E1)[&rate=5.523567927143239E-4]:1.417688418508E0,(19[&rate=6.91803846308752E-4]:1.504360031851E1,18[&rate=7.945340957059258E-4]:1.504360031851E1)[&rate=4.759871500750643E-4]:5.497550376047E1)[&rate=5.10891630405812E-4]:2.601091598373E0,((10[&rate=6.820473462344158E-4]:2.499121319924E1,31[&rate=8.084302908223347E-4]:2.499121319924E1)[&rate=3.135226353074555E-4]:4.717627786596E1,23[&rate=5.523567927143239E-4]:7.21674910652E1)[&rate=7.120750945492981E-4]:4.527046121553E-1)[&rate=4.3737102392230347E-4]:1.539583293474E0)[&rate=7.226450443757622E-4]:2.307096506365E0,(17[&rate=9.126299575190982E-4]:5.866051275335E1,(27[&rate=4.3737102392230347E-4]:3.477236670925E1,28[&rate=8.727909142795875E-4]:3.477236670925E1)[&rate=0.0010621386109660028]:2.38881460441E1)[&rate=5.441477553518497E-4]:1.780636272384E1)[&rate=0.0010621386109660028]:5.000986834904E1); +tree STATE_760000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55150.344274581075,EEF_ucld_branchRates=-266.168517335019,lnP=-55150.344274581075,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.161291468611983E-4]:7.189257695141E0,9[&rate=0.0011903626042742877]:7.189257695141E0)[&rate=4.5674015777749557E-4]:6.320946196284E0,15[&rate=8.072365030640622E-4]:1.351020389142E1)[&rate=9.655632261109868E-4]:9.811781337475E1,(14[&rate=0.001071322979159706]:4.821791949564E1,24[&rate=8.224082043348873E-4]:4.821791949564E1)[&rate=7.076963858828783E-4]:6.341009777054E1)[&rate=5.354524874565591E-4]:1.768959069804E1,(((25[&rate=7.298370548255102E-4]:7.519823089237E1,(((((30[&rate=5.605866917362596E-4]:4.706448341378E1,26[&rate=5.015574262853454E-4]:4.706448341378E1)[&rate=9.153746462798916E-4]:1.081211166842E1,32[&rate=4.751813811978417E-4]:5.787659508219E1)[&rate=7.79159166954412E-4]:1.029893832248E1,((((4[&rate=7.185925598798446E-4]:3.364123092234E0,3[&rate=7.660748468525097E-4]:3.364123092234E0)[&rate=5.85927156280515E-4]:5.529457559644E-1,2[&rate=0.0011224590688588168]:3.917068848198E0)[&rate=5.186158731219478E-4]:1.047727936011E1,5[&rate=3.282974994686918E-4]:1.439434820831E1)[&rate=6.868162941899245E-4]:1.59424262133E0,((7[&rate=6.573654128419196E-4]:8.312004733168E0,6[&rate=0.0011224590688588168]:8.312004733168E0)[&rate=4.751813811978417E-4]:7.606523154467E-1,1[&rate=5.774344429551248E-4]:9.072657048615E0)[&rate=4.660700970382771E-4]:6.915933781023E0)[&rate=6.573654128419196E-4]:5.218694257503E1)[&rate=6.206745914128092E-4]:2.617864071711E0,(16[&rate=6.118433982982135E-4]:3.644644781979E1,((22[&rate=9.391148622776941E-4]:2.527320965062E0,21[&rate=8.937935852606769E-4]:2.527320965062E0)[&rate=5.522044117220682E-4]:4.539767730609E0,20[&rate=4.471455329963303E-4]:7.067088695671E0)[&rate=7.660748468525097E-4]:2.937935912412E1)[&rate=7.185925598798446E-4]:3.43469496566E1)[&rate=3.282974994686918E-4]:2.995798948003E0,12[&rate=6.479546946459751E-4]:7.378919642439E1)[&rate=0.0010301247482218808]:1.409034467989E0)[&rate=3.925573694836445E-4]:1.566203499627E0,((((11[&rate=4.928949801192232E-4]:2.125502929371E1,29[&rate=4.2692144471390223E-4]:2.125502929371E1)[&rate=5.186158731219478E-4]:4.92089079293E1,(33[&rate=8.384856031907015E-4]:6.413711202505E1,13[&rate=5.015574262853454E-4]:6.413711202505E1)[&rate=4.660700970382771E-4]:6.326825197961E0)[&rate=7.79159166954412E-4]:1.948460059021E0,(19[&rate=5.944837662736369E-4]:1.676898513063E1,18[&rate=5.438312171081104E-4]:1.676898513063E1)[&rate=5.605866917362596E-4]:5.56434121514E1)[&rate=6.296263321408835E-4]:1.924291276972E0,((10[&rate=4.660700970382771E-4]:2.341296355287E1,31[&rate=8.072365030640622E-4]:2.341296355287E1)[&rate=3.647761450527345E-4]:4.960582368352E1,23[&rate=5.438312171081104E-4]:7.301878723639E1)[&rate=4.2692144471390223E-4]:1.317901322612E0)[&rate=6.868162941899245E-4]:2.427745832999E0)[&rate=5.689921304287272E-4]:3.270228659264E0,(17[&rate=9.153746462798916E-4]:6.260651192925E1,(27[&rate=4.047306855484664E-4]:3.447648632055E1,28[&rate=8.739728737209499E-4]:3.447648632055E1)[&rate=8.739728737209499E-4]:2.813002560871E1)[&rate=6.118433982982135E-4]:1.742815112201E1)[&rate=0.0012927766098412268]:4.928294491296E1); +tree STATE_770000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.5324309916,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.5324309916,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.0238974300974706E-4]:7.253261647156E0,9[&rate=7.589619695539044E-4]:7.253261647156E0)[&rate=4.12125220914992E-4]:9.12847796961E0,15[&rate=6.49488662929709E-4]:1.638173961677E1)[&rate=5.937913081567761E-4]:9.409701631642E1,(14[&rate=0.0011912096431048278]:3.975017094763E1,24[&rate=8.113152095820876E-4]:3.975017094763E1)[&rate=0.0010714071853514511]:7.072858498555E1)[&rate=0.0011912096431048278]:1.896636375338E1,(((25[&rate=5.532001622028132E-4]:7.702040980136E1,(((((30[&rate=6.867922426092057E-4]:5.322669526753E1,26[&rate=6.867922426092057E-4]:5.322669526753E1)[&rate=6.152746115961397E-4]:9.830725724288E0,32[&rate=5.054360693218599E-4]:6.305742099182E1)[&rate=3.6107510832553337E-4]:9.16676698079E0,((((4[&rate=5.833764828162061E-4]:2.545133773583E0,3[&rate=7.928743206654859E-4]:2.545133773583E0)[&rate=6.263883367892908E-4]:6.734250398319E-1,2[&rate=4.498633554042796E-4]:3.218558813415E0)[&rate=5.242584596740147E-4]:1.057147494149E1,5[&rate=2.610554530980564E-4]:1.379003375491E1)[&rate=9.557666380719462E-4]:1.481840703734E0,((7[&rate=4.591284695900369E-4]:8.082341653522E0,6[&rate=0.0010271238247065225]:8.082341653522E0)[&rate=3.498379695018622E-4]:1.062214003147E0,1[&rate=5.054360693218599E-4]:9.144555656668E0)[&rate=3.9246683832268596E-4]:6.127318801974E0)[&rate=5.242584596740147E-4]:5.695231351397E1)[&rate=3.2553373988403726E-4]:2.272653668302E0,(16[&rate=3.8231195227624335E-4]:3.955834005638E1,((22[&rate=8.745828059780699E-4]:2.3311208713E0,21[&rate=4.12125220914992E-4]:2.3311208713E0)[&rate=7.000866172578479E-4]:5.642908590651E0,20[&rate=5.054360693218599E-4]:7.974029461951E0)[&rate=7.432556040938871E-4]:3.158431059443E1)[&rate=8.309442916705051E-4]:3.493850158453E1)[&rate=9.260219058890646E-4]:1.6252466032E0,12[&rate=8.991390376618166E-4]:7.612208824411E1)[&rate=3.6107510832553337E-4]:8.983215572436E-1)[&rate=8.745828059780699E-4]:1.355851143839E0,((((11[&rate=5.532001622028132E-4]:1.843918890631E1,29[&rate=4.8684804404665983E-4]:1.843918890631E1)[&rate=5.630992831785108E-4]:4.987818528387E1,(33[&rate=9.557666380719462E-4]:6.191248818911E1,13[&rate=2.8069237175515924E-4]:6.191248818911E1)[&rate=0.0012808139267449761]:6.404886001057E0)[&rate=4.591284695900369E-4]:5.230652870352E0,(19[&rate=7.589619695539044E-4]:1.675519880094E1,18[&rate=4.0238974300974706E-4]:1.675519880094E1)[&rate=5.337957946257013E-4]:5.679282825959E1)[&rate=4.6836888147953556E-4]:1.241624356231E0,((10[&rate=4.12125220914992E-4]:2.360672107627E1,31[&rate=7.754659491959088E-4]:2.360672107627E1)[&rate=2.9732753100044225E-4]:5.044888055845E1,23[&rate=6.044167786381218E-4]:7.405560163472E1)[&rate=4.311774879701899E-4]:7.34049782038E-1)[&rate=3.2553373988403726E-4]:3.586609528442E0)[&rate=5.054360693218599E-4]:4.405361639629E0,(17[&rate=6.739561946859455E-4]:7.009305980529E1,(27[&rate=4.405536422032317E-4]:3.366976166682E1,28[&rate=0.0012808139267449761]:3.366976166682E1)[&rate=7.000866172578479E-4]:3.642329813847E1)[&rate=7.589619695539044E-4]:1.268856277953E1)[&rate=0.0012808139267449761]:4.666349710174E1); +tree STATE_780000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.5851256631,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.5851256631,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.32455762836401E-4]:6.548146323772E0,9[&rate=0.0010392317039043034]:6.548146323772E0)[&rate=6.541635499501096E-4]:7.952713377332E0,15[&rate=4.920648734400933E-4]:1.45008597011E1)[&rate=8.662879864341047E-4]:9.091226369158E1,(14[&rate=0.0013830464839981586]:3.810289276906E1,24[&rate=0.0013157922424997706]:3.810289276906E1)[&rate=0.0011698264553000586]:6.731023062363E1)[&rate=0.001467502609352404]:1.961670405119E1,(((25[&rate=5.270435720871074E-4]:7.316305099791E1,(((((30[&rate=8.490498183783743E-4]:5.125456224221E1,26[&rate=3.859824625133157E-4]:5.125456224221E1)[&rate=0.001098535212258677]:9.22034236949E0,32[&rate=4.8010232876676185E-4]:6.04749046117E1)[&rate=4.6791826665215614E-4]:8.389911790119E0,((((4[&rate=7.298531169915985E-4]:1.921855104294E0,2[&rate=6.071193075486251E-4]:1.921855104294E0)[&rate=0.0010392317039043034]:9.090008890117E-1,3[&rate=7.433546206876778E-4]:2.830855993306E0)[&rate=3.3136261185624577E-4]:1.046230392531E1,5[&rate=3.859824625133157E-4]:1.329315991862E1)[&rate=7.166474757498419E-4]:1.024254469566E0,((7[&rate=5.270435720871074E-4]:7.748943341785E0,6[&rate=9.226476202246498E-4]:7.748943341785E0)[&rate=4.920648734400933E-4]:1.092775174262E0,1[&rate=4.1568174094347996E-4]:8.841718516047E0)[&rate=4.55458768540252E-4]:5.475695872138E0)[&rate=6.071193075486251E-4]:5.454740201364E1)[&rate=6.422177937349451E-4]:1.789362905414E0,(16[&rate=3.6956860044791857E-4]:3.654545409957E1,((22[&rate=0.0010392317039043034]:2.001445779714E0,21[&rate=4.294341564670067E-4]:2.001445779714E0)[&rate=9.651175420609862E-4]:4.342581949208E0,20[&rate=8.490498183783743E-4]:6.344027728921E0)[&rate=9.029966629325919E-4]:3.020142637064E1)[&rate=9.433094351219644E-4]:3.410872520767E1)[&rate=0.0011698264553000586]:1.418866193846E0,12[&rate=9.651175420609862E-4]:7.207304550108E1)[&rate=0.0013157922424997706]:1.090005496823E0)[&rate=0.0015812693603791978]:8.218518813755E-1,((((33[&rate=6.910165069045749E-4]:5.600065584164E1,13[&rate=3.3136261185624577E-4]:5.600065584164E1)[&rate=6.18714758273854E-4]:1.090803760067E1,(11[&rate=8.32455762836401E-4]:1.896827822641E1,29[&rate=5.727290519531828E-4]:1.896827822641E1)[&rate=7.859445585192172E-4]:4.79404152159E1)[&rate=0.001467502609352404]:2.176461597863E0,(19[&rate=6.662648774389848E-4]:1.362980736457E1,18[&rate=0.0013830464839981586]:1.362980736457E1)[&rate=5.613323804044898E-4]:5.545534767561E1)[&rate=4.8010232876676185E-4]:2.397331087099E0,((10[&rate=4.6791826665215614E-4]:2.59187116463E1,31[&rate=5.841457519424177E-4]:2.59187116463E1)[&rate=5.613323804044898E-4]:4.486428879488E1,23[&rate=5.270435720871074E-4]:7.078300044118E1)[&rate=4.920648734400933E-4]:6.994856860948E-1)[&rate=7.166474757498419E-4]:2.502416752005E0)[&rate=6.18714758273854E-4]:3.359656709797E0,(17[&rate=9.029966629325919E-4]:6.709728276972E1,(27[&rate=7.037103928517587E-4]:2.75805501486E1,28[&rate=0.0010676608534717297]:2.75805501486E1)[&rate=0.001098535212258677]:3.951673262113E1)[&rate=5.385130615672812E-4]:1.024727681936E1)[&rate=6.304079342682537E-4]:4.76852678548E1); +tree STATE_790000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.32527386783,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.32527386783,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.118482569334975E-4]:6.321518292542E0,9[&rate=6.29726678209237E-4]:6.321518292542E0)[&rate=3.2680027085809873E-4]:8.71427131593E0,15[&rate=9.903668907412751E-4]:1.503578960847E1)[&rate=7.380959259644978E-4]:1.023627936744E2,(14[&rate=0.0014570815389533026]:4.511125849093E1,24[&rate=7.699321944751683E-4]:4.511125849093E1)[&rate=9.337868601339419E-4]:7.22873247919E1)[&rate=9.608868924009312E-4]:1.207580602174E1,(((25[&rate=6.176828843754559E-4]:7.138407651894E1,((((16[&rate=4.965370587508066E-4]:3.724325599135E1,((22[&rate=9.903668907412751E-4]:2.028826555418E0,21[&rate=4.441054909961613E-4]:2.028826555418E0)[&rate=7.230545092062196E-4]:5.008828354334E0,20[&rate=4.118482569334975E-4]:7.037654909752E0)[&rate=0.0013462024311208906]:3.02056010816E1)[&rate=8.633497447201288E-4]:2.896663049248E1,((((4[&rate=4.227342060687943E-4]:2.02696631264E0,2[&rate=3.6592529911581823E-4]:2.02696631264E0)[&rate=0.0010586265181049335]:2.904307151312E-1,3[&rate=4.546548402879399E-4]:2.317397027771E0)[&rate=5.070353433508079E-4]:9.570435488018E0,5[&rate=5.496998513929008E-4]:1.188783251579E1)[&rate=6.420339534374775E-4]:2.308240387501E0,((7[&rate=4.118482569334975E-4]:8.614176361928E0,6[&rate=8.045596740635029E-4]:8.614176361928E0)[&rate=5.070353433508079E-4]:4.767300970468E-1,1[&rate=3.5351534733626055E-4]:9.090906458975E0)[&rate=5.606220112799831E-4]:5.105166444316E0)[&rate=6.058784057544988E-4]:5.201381358054E1)[&rate=8.426842919861049E-4]:1.667961315908E0,((30[&rate=7.380959259644978E-4]:5.04377657877E1,26[&rate=5.388976984687352E-4]:5.04377657877E1)[&rate=4.546548402879399E-4]:9.016642100139E0,32[&rate=2.9602474210386353E-4]:5.945440788784E1)[&rate=6.944559650387033E-4]:8.423439911897E0)[&rate=0.0012642210870195954]:1.61318483846E0,12[&rate=0.001022724370661214]:6.94910326382E1)[&rate=0.0011991513786994866]:1.89304388074E0)[&rate=5.716821251482823E-4]:2.894091811389E0,((((33[&rate=0.0010586265181049335]:5.343781925382E1,13[&rate=5.716821251482823E-4]:5.343781925382E1)[&rate=2.568426757476306E-4]:1.415182400653E1,(11[&rate=8.426842919861049E-4]:1.81599302277E1,29[&rate=5.388976984687352E-4]:1.81599302277E1)[&rate=8.231315012729861E-4]:4.942971303264E1)[&rate=3.1208797145621144E-4]:1.854704279298E0,(19[&rate=3.778808891391027E-4]:1.496362657021E1,18[&rate=9.608868924009312E-4]:1.496362657021E1)[&rate=3.8947427028808847E-4]:5.448072096944E1)[&rate=0.0012642210870195954]:3.532769849838E0,((10[&rate=7.699321944751683E-4]:2.518060891621E1,31[&rate=5.388976984687352E-4]:2.518060891621E1)[&rate=3.405293272278505E-4]:4.713208943576E1,23[&rate=4.756140648089928E-4]:7.231269835197E1)[&rate=4.118482569334975E-4]:6.644190375151E-1)[&rate=4.8606971358347535E-4]:1.301050940842E0)[&rate=5.281979188612834E-4]:3.973045615446E0,(17[&rate=8.852861109288588E-4]:6.784665261012E1,(27[&rate=6.546307900569246E-4]:2.612596129496E1,28[&rate=0.0012642210870195954]:2.612596129496E1)[&rate=6.29726678209237E-4]:4.172069131517E1)[&rate=4.227342060687943E-4]:1.040456133565E1)[&rate=0.0014570815389533026]:5.12231753588E1); +tree STATE_800000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.45385545644,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.45385545644,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.344531818068501E-4]:7.473871321152E0,9[&rate=4.2662812713404447E-4]:7.473871321152E0)[&rate=8.911133774872204E-4]:5.915892175199E0,15[&rate=6.435354057422978E-4]:1.338976349635E1)[&rate=7.337485329458045E-4]:1.011946259801E2,(14[&rate=8.235524178053974E-4]:4.724762275901E1,24[&rate=7.569312633842445E-4]:4.724762275901E1)[&rate=0.0010490500040153104]:6.73367667174E1)[&rate=7.951159846512456E-4]:1.040715570981E1,(((25[&rate=7.951159846512456E-4]:7.288176288474E1,(((((((4[&rate=5.81997957100826E-4]:1.518738449059E0,2[&rate=9.330073100773406E-4]:1.518738449059E0)[&rate=5.81997957100826E-4]:1.176069453994E0,3[&rate=7.015369741372303E-4]:2.694807903052E0)[&rate=5.991899353724678E-4]:8.471522169193E0,5[&rate=3.892026921650955E-4]:1.116633007225E1)[&rate=3.106508396855828E-4]:2.974709445245E0,((7[&rate=5.564482482021127E-4]:8.287760460211E0,1[&rate=6.078749675194837E-4]:8.287760460211E0)[&rate=5.308344811020112E-4]:1.776232214449E0,6[&rate=7.337485329458045E-4]:1.006399267466E1)[&rate=6.716728070653385E-4]:4.077046842831E0)[&rate=5.135012924657135E-4]:5.239160553079E1,((30[&rate=6.078749675194837E-4]:4.644365786556E1,26[&rate=5.479381239117166E-4]:4.644365786556E1)[&rate=0.0011423543148913545]:9.567826637987E0,32[&rate=7.569312633842445E-4]:5.601148450354E1)[&rate=4.957706115010657E-4]:1.052116054473E1)[&rate=5.81997957100826E-4]:1.693526730981E0,(16[&rate=4.7742823738814236E-4]:3.891053381069E1,((22[&rate=4.6794098920812364E-4]:3.232157713506E0,21[&rate=9.111714979842913E-4]:3.232157713506E0)[&rate=5.905688301678444E-4]:5.532747840212E0,20[&rate=5.564482482021127E-4]:8.764905553717E0)[&rate=0.0011423543148913545]:3.014562825698E1)[&rate=8.911133774872204E-4]:2.931563796856E1)[&rate=0.001090688367265143]:4.336740880408E0,12[&rate=8.235524178053974E-4]:7.256291265967E1)[&rate=4.866917863393037E-4]:3.188502250703E-1)[&rate=6.527547626760437E-4]:1.433835129946E0,((((33[&rate=9.330073100773406E-4]:5.635907564719E1,13[&rate=4.7742823738814236E-4]:5.635907564719E1)[&rate=6.435354057422978E-4]:9.488896394807E0,(11[&rate=4.7742823738814236E-4]:1.845554322509E1,29[&rate=5.135012924657135E-4]:1.845554322509E1)[&rate=8.725311421628182E-4]:4.739242881691E1)[&rate=5.0469766747749E-4]:1.552047354943E0,(19[&rate=0.0010490500040153104]:1.463503135761E1,18[&rate=8.911133774872204E-4]:1.463503135761E1)[&rate=3.7434440306935836E-4]:5.276498803933E1)[&rate=4.0263544986695454E-4]:4.737925278575E0,((10[&rate=5.564482482021127E-4]:1.973871352172E1,31[&rate=9.330073100773406E-4]:1.973871352172E1)[&rate=4.6794098920812364E-4]:5.152284378023E1,23[&rate=4.3760973935425874E-4]:7.126155730195E1)[&rate=7.691532865968833E-4]:8.763873735632E-1)[&rate=5.905688301678444E-4]:2.177653339166E0)[&rate=6.435354057422978E-4]:3.110086854488E0,(17[&rate=8.089854819802062E-4]:6.9925847292E1,(27[&rate=4.48096858474827E-4]:2.642222358937E1,28[&rate=0.0010490500040153104]:2.642222358937E1)[&rate=7.119773553102284E-4]:4.350362370263E1)[&rate=4.2662812713404447E-4]:7.499837577172E0)[&rate=0.0012109346357979992]:4.756586031704E1); +tree STATE_810000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55160.14298629151,EEF_ucld_branchRates=-266.168517335019,lnP=-55160.14298629151,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.36356383532107E-4]:7.59589354893E0,9[&rate=0.0011620402326078]:7.59589354893E0)[&rate=5.296066976212456E-4]:4.535024859767E0,15[&rate=5.942088904771761E-4]:1.21309184087E1)[&rate=7.36356383532107E-4]:1.112737502884E2,(14[&rate=9.938468527416538E-4]:4.625884361997E1,24[&rate=7.36356383532107E-4]:4.625884361997E1)[&rate=7.8514332711469E-4]:7.714582507715E1)[&rate=0.0011620402326078]:3.021929372181E0,(((25[&rate=6.055807748800204E-4]:7.600886195508E1,(((((((4[&rate=8.414718514233315E-4]:1.462174261868E0,2[&rate=4.988272486160912E-4]:1.462174261868E0)[&rate=4.379340646527872E-4]:6.486620532412E-1,3[&rate=4.0666323213377697E-4]:2.110836315109E0)[&rate=9.629465122293221E-4]:1.028669070209E1,5[&rate=3.239993441142344E-4]:1.23975270172E1)[&rate=9.347786471579876E-4]:2.223339018187E0,((7[&rate=4.684405913450021E-4]:7.114679108352E0,6[&rate=3.5000216052246763E-4]:7.114679108352E0)[&rate=4.886784285208488E-4]:1.289340975605E0,1[&rate=4.276334136752185E-4]:8.404020083957E0)[&rate=5.505742274465613E-4]:6.21684595143E0)[&rate=5.400343681870574E-4]:5.39350673863E1,((30[&rate=6.17179272099044E-4]:4.92164117078E1,26[&rate=7.213749476077792E-4]:4.92164117078E1)[&rate=5.942088904771761E-4]:1.165773257327E1,32[&rate=4.4815202371425273E-4]:6.087414428107E1)[&rate=2.93997772410455E-4]:7.681789140616E0)[&rate=3.736879211522297E-4]:1.114862637018E0,(16[&rate=3.8494833127585167E-4]:3.750682027101E1,((22[&rate=0.0013018931538154232]:3.12132718283E0,21[&rate=8.216795846220895E-4]:3.12132718283E0)[&rate=5.192742321792005E-4]:6.250751523375E0,20[&rate=4.1722094471814295E-4]:9.372078706205E0)[&rate=0.0011620402326078]:2.813474156481E1)[&rate=0.001223959887129298]:3.216397578769E1)[&rate=9.938468527416538E-4]:2.885021150128E0,12[&rate=5.400343681870574E-4]:7.255581720883E1)[&rate=3.8494833127585167E-4]:3.453044746254E0)[&rate=5.400343681870574E-4]:1.3673376839E0,((((11[&rate=5.612435381832351E-4]:1.620914494695E1,29[&rate=6.17179272099044E-4]:1.620914494695E1)[&rate=8.414718514233315E-4]:5.38250238073E1,(19[&rate=4.4815202371425273E-4]:1.721542613831E1,18[&rate=9.938468527416538E-4]:1.721542613831E1)[&rate=3.620693463415381E-4]:5.281874261594E1)[&rate=9.347786471579876E-4]:1.540847845411E0,(33[&rate=7.519321805323345E-4]:6.055285532981E1,13[&rate=6.7945039583527E-4]:6.055285532981E1)[&rate=9.088714358781018E-4]:1.102216126985E1)[&rate=3.5000216052246763E-4]:2.941065167121E0,((10[&rate=3.959212118797708E-4]:1.812565672046E1,31[&rate=7.069298325344E-4]:1.812565672046E1)[&rate=2.5572077704553574E-4]:5.436626475235E1,23[&rate=5.192742321792005E-4]:7.249192147281E1)[&rate=8.029451197239374E-4]:2.024160293975E0)[&rate=4.0666323213377697E-4]:2.860117872201E0)[&rate=5.090200806007932E-4]:5.155254799853E0,(17[&rate=9.347786471579876E-4]:6.846608139923E1,(27[&rate=5.612435381832351E-4]:2.284721914937E1,28[&rate=0.0013018931538154232]:2.284721914937E1)[&rate=6.411503311032941E-4]:4.561886224986E1)[&rate=3.096635299177424E-4]:1.406537303961E1)[&rate=0.0014071655987174226]:4.389514363046E1); +tree STATE_820000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55120.59142002682,EEF_ucld_branchRates=-266.168517335019,lnP=-55120.59142002682,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.725184709564013E-4]:7.648889747613E0,9[&rate=0.0012227333064891155]:7.648889747613E0)[&rate=5.35152740521634E-4]:5.39301144569E0,15[&rate=8.725184709564013E-4]:1.30419011933E1)[&rate=8.508584929923043E-4]:9.497572601925E1,(14[&rate=0.0012227333064891155]:4.351972279638E1,24[&rate=7.023459032993295E-4]:4.351972279638E1)[&rate=9.211789564110922E-4]:6.449790441617E1)[&rate=0.0012227333064891155]:1.936946588284E1,(((25[&rate=7.604943317455502E-4]:7.470961470564E1,(((((((4[&rate=4.3955591828141955E-4]:2.117222990147E0,2[&rate=4.2000501538744836E-4]:2.117222990147E0)[&rate=4.777373060031808E-4]:3.30833574208E-1,3[&rate=5.854154224516317E-4]:2.448056564355E0)[&rate=4.2000501538744836E-4]:9.804693129915E0,5[&rate=2.652263284289962E-4]:1.225274969427E1)[&rate=4.491796276388419E-4]:3.356216190539E0,((7[&rate=5.35152740521634E-4]:7.716039453317E0,6[&rate=7.302475930005035E-4]:7.716039453317E0)[&rate=4.967160997971764E-4]:1.092125297797E0,1[&rate=4.2000501538744836E-4]:8.808164751114E0)[&rate=5.548654477271905E-4]:6.800801133696E0)[&rate=3.174480024555104E-4]:5.21640298122E1,((30[&rate=6.175708913157619E-4]:4.851867199016E1,26[&rate=7.160342131365585E-4]:4.851867199016E1)[&rate=7.023459032993295E-4]:9.050684368192E0,32[&rate=3.6764979213999943E-4]:5.756935635835E1)[&rate=3.023439000645008E-4]:1.020363933865E1)[&rate=5.158116173993929E-4]:3.947958749798E0,(16[&rate=3.8942385597842737E-4]:3.820237227343E1,((22[&rate=5.649011679486583E-4]:4.525374108061E0,21[&rate=3.8942385597842737E-4]:4.525374108061E0)[&rate=5.649011679486583E-4]:4.680849462953E0,20[&rate=5.158116173993929E-4]:9.206223571014E0)[&rate=0.0010989721626749277]:2.899614870242E1)[&rate=0.0011538731812381256]:3.351858217337E1)[&rate=9.48909873618318E-4]:2.001435880492E0,12[&rate=9.79599276844559E-4]:7.37223903273E1)[&rate=5.158116173993929E-4]:9.87224378345E-1)[&rate=8.958529695589416E-4]:3.667097996496E0,((((11[&rate=7.936794917001E-4]:1.528789723766E1,29[&rate=6.519008338728006E-4]:1.528789723766E1)[&rate=7.023459032993295E-4]:5.806687102135E1,(33[&rate=8.116186181675928E-4]:6.152983166931E1,13[&rate=4.2000501538744836E-4]:6.152983166931E1)[&rate=5.254436081906409E-4]:1.18249365897E1)[&rate=6.175708913157619E-4]:1.160146174385E0,(19[&rate=4.2000501538744836E-4]:1.54623602193E1,18[&rate=7.936794917001E-4]:1.54623602193E1)[&rate=3.4404567121025314E-4]:5.905255421409E1)[&rate=5.750786635652028E-4]:1.858525070125E0,((10[&rate=5.959298378822465E-4]:2.240011236404E1,31[&rate=4.3955591828141955E-4]:2.240011236404E1)[&rate=3.787174200706339E-4]:5.227891346214E1,23[&rate=4.777373060031808E-4]:7.467902582618E1)[&rate=0.0011538731812381256]:1.694413677339E0)[&rate=7.766748452711889E-4]:2.00327319862E0)[&rate=3.5613186538797865E-4]:2.003941891158E0,(17[&rate=6.175708913157619E-4]:7.042862105927E1,(27[&rate=5.254436081906409E-4]:2.520966735937E1,28[&rate=0.0011538731812381256]:2.520966735937E1)[&rate=7.302475930005035E-4]:4.521895369989E1)[&rate=3.5613186538797865E-4]:9.952033534029E0)[&rate=8.958529695589416E-4]:4.700643850209E1); +tree STATE_830000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55143.38273308143,EEF_ucld_branchRates=-266.168517335019,lnP=-55143.38273308143,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.506555873556851E-4]:7.782559943303E0,9[&rate=4.4134343887960987E-4]:7.782559943303E0)[&rate=4.795290057618743E-4]:3.886493701882E0,15[&rate=5.295237023593705E-4]:1.166905364519E1)[&rate=9.874478348461955E-4]:9.434401092198E1,(14[&rate=0.0011380672227444576]:4.140097174971E1,24[&rate=8.371498644216759E-4]:4.140097174971E1)[&rate=8.617805661195788E-4]:6.461209281745E1)[&rate=0.0012129038251036403]:2.027672574672E1,(((25[&rate=6.595978307798603E-4]:7.578405838826E1,(((16[&rate=3.749228995664782E-4]:3.919324198424E1,((22[&rate=3.127711449059808E-4]:2.523869494099E0,21[&rate=7.366813638643875E-4]:2.523869494099E0)[&rate=0.0012129038251036403]:6.596889354711E0,20[&rate=7.198366130957052E-4]:9.120758848811E0)[&rate=0.001314217762520253]:3.007248313543E1)[&rate=0.0010295070770397566]:3.371750487466E1,(((30[&rate=8.371498644216759E-4]:5.091051873416E1,26[&rate=4.6030977385842076E-4]:5.091051873416E1)[&rate=5.399903353083351E-4]:8.338346113434E0,32[&rate=5.726652849829668E-4]:5.924886484759E1)[&rate=4.0363270993555665E-4]:1.071153093659E1,((((4[&rate=8.371498644216759E-4]:2.009648719856E0,2[&rate=4.319144420999477E-4]:2.009648719856E0)[&rate=6.884435116591824E-4]:1.02356672841E0,3[&rate=4.698798128342713E-4]:3.033215448265E0)[&rate=3.4503991728950775E-4]:9.273018170191E0,5[&rate=3.941413644910323E-4]:1.230623361846E1)[&rate=3.3463164790819617E-4]:3.007315054923E0,((7[&rate=3.127711449059808E-4]:7.405224186519E0,6[&rate=5.295237023593705E-4]:7.405224186519E0)[&rate=7.930929148350972E-4]:1.434749012153E0,1[&rate=3.749228995664782E-4]:8.839973198672E0)[&rate=7.037859961249325E-4]:6.473575474709E0)[&rate=6.077355501000912E-4]:5.46468471108E1)[&rate=3.6513857614309795E-4]:2.950351074716E0)[&rate=8.371498644216759E-4]:8.526486969747E-1,12[&rate=7.198366130957052E-4]:7.376339555587E1)[&rate=3.749228995664782E-4]:2.020662832387E0)[&rate=4.698798128342713E-4]:4.042041478786E-1,((((33[&rate=5.726652849829668E-4]:5.640319059084E1,13[&rate=2.8882627607631475E-4]:5.640319059084E1)[&rate=2.6127515959781857E-4]:1.386073688442E1,(19[&rate=4.795290057618743E-4]:1.772321736202E1,18[&rate=7.731771059123632E-4]:1.772321736202E1)[&rate=4.5080302175045246E-4]:5.254071011324E1)[&rate=9.180184465772864E-4]:2.102766722736E0,(11[&rate=4.89273163642694E-4]:1.658910594997E1,29[&rate=3.941413644910323E-4]:1.658910594997E1)[&rate=6.595978307798603E-4]:5.577758824802E1)[&rate=3.127711449059808E-4]:2.104229074197E0,((10[&rate=5.19236459853593E-4]:2.529787114429E1,31[&rate=5.091104187669138E-4]:2.529787114429E1)[&rate=2.2625527042442634E-4]:4.900331340396E1,23[&rate=4.795290057618743E-4]:7.430118454825E1)[&rate=3.749228995664782E-4]:1.697387239375E-1)[&rate=3.4503991728950775E-4]:1.717339263947E0)[&rate=6.737353930319007E-4]:3.253259998037E0,(17[&rate=7.544214387129368E-4]:6.906637409058E1,(27[&rate=5.615399158351626E-4]:2.999544425304E1,28[&rate=0.0011380672227444576]:2.999544425304E1)[&rate=6.595978307798603E-4]:3.907092983754E1)[&rate=2.8882627607631475E-4]:1.037514844359E1)[&rate=0.0011380672227444576]:4.684826777971E1); +tree STATE_840000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55131.18910395327,EEF_ucld_branchRates=-266.168517335019,lnP=-55131.18910395327,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.583069542784543E-4]:6.117143488927E0,9[&rate=0.0012299023974914984]:6.117143488927E0)[&rate=0.0010488734591935682]:5.603530467021E0,15[&rate=4.661037081356037E-4]:1.172067395595E1)[&rate=8.853541708933094E-4]:9.164483155766E1,(14[&rate=0.0013807987099183428]:4.191557849998E1,24[&rate=8.440921460119056E-4]:4.191557849998E1)[&rate=7.728624574174855E-4]:6.144992701362E1)[&rate=9.318680455838292E-4]:2.47085651122E1,(((25[&rate=8.068780213905441E-4]:7.477336523255E1,(((16[&rate=4.4438089546392385E-4]:3.967397877284E1,((22[&rate=0.0014945823357483995]:3.086250918198E0,21[&rate=4.221997750956211E-4]:3.086250918198E0)[&rate=6.093317210266982E-4]:5.618870963929E0,20[&rate=5.198295911378435E-4]:8.705121882128E0)[&rate=0.0013807987099183428]:3.096885689071E1)[&rate=0.0012966726203407185]:3.055665511382E1,12[&rate=8.068780213905441E-4]:7.023063388666E1)[&rate=7.568527955538441E-4]:2.21960752985E0,(((30[&rate=9.576214667316884E-4]:5.36823409797E1,26[&rate=6.212182604248836E-4]:5.36823409797E1)[&rate=6.212182604248836E-4]:9.51431037006E0,32[&rate=5.415364702796566E-4]:6.319665134976E1)[&rate=2.355208882733238E-4]:6.570205831179E0,((((4[&rate=4.221997750956211E-4]:1.976352570595E0,2[&rate=3.6237496658911804E-4]:1.976352570595E0)[&rate=9.07860229731748E-4]:4.541350616624E-1,3[&rate=5.861403475132309E-4]:2.430487632258E0)[&rate=2.6324041831210304E-4]:9.450363799009E0,5[&rate=3.349781280566697E-4]:1.188085143127E1)[&rate=9.576214667316884E-4]:2.80104060173E0,((7[&rate=4.333645933367294E-4]:8.185061157772E0,6[&rate=8.853541708933094E-4]:8.185061157772E0)[&rate=7.895136099767679E-4]:7.631671163362E-1,1[&rate=5.52511604333313E-4]:8.948228274108E0)[&rate=9.318680455838292E-4]:5.733663758889E0)[&rate=3.6237496658911804E-4]:5.508496514794E1)[&rate=3.8736315315597667E-4]:2.683384235567E0)[&rate=5.306484818843934E-4]:2.323123816047E0)[&rate=9.854263304344374E-4]:2.411714867461E0,((((11[&rate=4.108455093504324E-4]:1.581214762123E1,29[&rate=3.349781280566697E-4]:1.581214762123E1)[&rate=7.568527955538441E-4]:5.533303712599E1,(33[&rate=5.415364702796566E-4]:6.122852567438E1,13[&rate=4.5528373968640676E-4]:6.122852567438E1)[&rate=7.414220386858697E-4]:9.91665907285E0)[&rate=3.992530614549727E-4]:1.163922237927E0,(19[&rate=6.093317210266982E-4]:1.910895743496E1,18[&rate=6.712291363893997E-4]:1.910895743496E1)[&rate=5.635918490500139E-4]:5.32001495502E1)[&rate=4.983251387849613E-4]:3.597980851619E0,((10[&rate=6.333272930438302E-4]:2.132584444595E1,31[&rate=6.333272930438302E-4]:2.132584444595E1)[&rate=4.5528373968640676E-4]:5.436813470751E1,23[&rate=4.4438089546392385E-4]:7.569397915346E1)[&rate=8.25038639177644E-4]:2.131086833172E-1)[&rate=4.983251387849613E-4]:1.277992263241E0)[&rate=5.52511604333313E-4]:8.473170531354E0,(17[&rate=0.0011271339756987627]:8.029534575012E1,(27[&rate=3.751019494446764E-4]:2.998202207614E1,28[&rate=0.0011745079642863409]:2.998202207614E1)[&rate=5.52511604333313E-4]:5.031332367398E1)[&rate=6.980840477509724E-4]:5.362904881248E0)[&rate=0.0013807987099183428]:4.241581999444E1); +tree STATE_850000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55107.989193203604,EEF_ucld_branchRates=-266.168517335019,lnP=-55107.989193203604,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.901499101678172E-4]:6.432815542754E0,9[&rate=0.0012424526694587287]:6.432815542754E0)[&rate=6.710917671905881E-4]:6.34007728269E0,15[&rate=8.139553509342538E-4]:1.277289282544E1)[&rate=7.811239635211544E-4]:1.007816193011E2,(14[&rate=0.0013177025627507883]:4.431760162153E1,24[&rate=9.121510518604724E-4]:4.431760162153E1)[&rate=0.0011326087490347988]:6.923691050505E1)[&rate=3.193121109636076E-4]:1.298411519767E1,(((25[&rate=6.961757940263124E-4]:7.870872969651E1,((12[&rate=9.121510518604724E-4]:7.338507991885E1,(16[&rate=5.386507872486772E-4]:4.040338179798E1,((22[&rate=8.901499101678172E-4]:3.558574226266E0,21[&rate=4.0127612537553043E-4]:3.558574226266E0)[&rate=7.365257678052527E-4]:6.773835594906E0,20[&rate=6.130240660966053E-4]:1.033240982117E1)[&rate=0.0012424526694587287]:3.007097197681E1)[&rate=0.0014190139752666567]:3.298169812087E1)[&rate=3.355002141254822E-4]:2.513229787435E0,(((30[&rate=6.130240660966053E-4]:5.470721365309E1,26[&rate=5.593836233582823E-4]:5.470721365309E1)[&rate=9.121510518604724E-4]:8.565483861557E0,32[&rate=3.502799929766801E-4]:6.327269751465E1)[&rate=4.456891812553701E-4]:7.937948623335E0,((((4[&rate=0.0010898176834783474]:2.107766872221E0,3[&rate=2.519446732150179E-4]:2.107766872221E0)[&rate=3.8938227261411625E-4]:3.934031917792E-1,2[&rate=6.3557818399442E-4]:2.501170064001E0)[&rate=6.3557818399442E-4]:7.165919578443E0,5[&rate=5.181255781187556E-4]:9.667089642444E0)[&rate=3.6403353576627666E-4]:3.573475695282E0,((7[&rate=4.8741025438541667E-4]:8.850671530135E0,6[&rate=7.50855425062406E-4]:8.850671530135E0)[&rate=4.456891812553701E-4]:1.268487269741E0,1[&rate=4.239878242831944E-4]:1.011915879988E1)[&rate=4.3493912970669E-4]:3.121406537849E0)[&rate=5.593836233582823E-4]:5.797008080026E1)[&rate=5.489826400145201E-4]:4.687663568305E0)[&rate=5.698706965416856E-4]:2.810419990222E0)[&rate=5.07896573635833E-4]:1.287885151112E0,((((11[&rate=4.6674251776796395E-4]:1.672505616658E1,29[&rate=5.911712884186903E-4]:1.672505616658E1)[&rate=5.593836233582823E-4]:5.891976849923E1,(33[&rate=9.611023675350458E-4]:6.353051344182E1,13[&rate=4.6674251776796395E-4]:6.353051344182E1)[&rate=5.489826400145201E-4]:1.211431122399E1)[&rate=0.0010188706897049764]:1.11304233315E0,(19[&rate=7.811239635211544E-4]:1.9577877511E1,18[&rate=6.242035907587395E-4]:1.9577877511E1)[&rate=3.8938227261411625E-4]:5.717998948797E1)[&rate=8.139553509342538E-4]:2.310539503629E0,((10[&rate=6.130240660966053E-4]:3.325315432695E1,31[&rate=5.07896573635833E-4]:3.325315432695E1)[&rate=4.3493912970669E-4]:4.46507936094E1,23[&rate=4.7711079393141924E-4]:7.790394793635E1)[&rate=8.315263240811577E-4]:1.164458566244E0)[&rate=7.50855425062406E-4]:9.282083450276E-1)[&rate=6.710917671905881E-4]:4.151794711775E0,(17[&rate=8.499979529494374E-4]:7.483537119704E1,(27[&rate=4.1278660635779704E-4]:3.486722617287E1,28[&rate=0.0012424526694587287]:3.486722617287E1)[&rate=7.657027589676421E-4]:3.996814502417E1)[&rate=9.611023675350458E-4]:9.313038362351E0)[&rate=0.0013177025627507883]:4.239021776486E1); +tree STATE_860000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55135.82232874746,EEF_ucld_branchRates=-266.168517335019,lnP=-55135.82232874746,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.454531732666434E-4]:7.030634821416E0,9[&rate=7.710375350690039E-4]:7.030634821416E0)[&rate=4.6709171425443104E-4]:4.467586169634E0,15[&rate=8.811181484187512E-4]:1.149822099105E1)[&rate=9.430823536957584E-4]:9.08815378505E1,(14[&rate=0.001460710684532219]:4.354645003043E1,24[&rate=9.209696802012094E-4]:4.354645003043E1)[&rate=0.0011840430001405424]:5.883330881113E1)[&rate=0.001332005351713493]:2.024764992007E1,(((25[&rate=7.449441167790197E-4]:7.192756910193E1,((12[&rate=8.294967230975612E-4]:6.866103325806E1,(16[&rate=4.6709171425443104E-4]:3.457560145238E1,((22[&rate=5.070120935988487E-4]:4.342561923179E0,21[&rate=4.3490970168402857E-4]:4.342561923179E0)[&rate=6.433413636822148E-4]:3.973269030195E0,20[&rate=7.847830189368318E-4]:8.315830953374E0)[&rate=0.0012473785453450718]:2.6259770499E1)[&rate=0.001460710684532219]:3.408543180568E1)[&rate=6.642734498417009E-4]:1.726684669926E0,(((30[&rate=8.458054386742958E-4]:4.826904652172E1,26[&rate=4.97235949286714E-4]:4.826904652172E1)[&rate=9.670165291383372E-4]:1.162100987439E1,32[&rate=3.5519391623544007E-4]:5.989005639611E1)[&rate=4.3490970168402857E-4]:6.809317648283E0,((((4[&rate=6.331200958149107E-4]:1.729150386756E0,3[&rate=5.934623935799287E-4]:1.729150386756E0)[&rate=3.855580804120216E-4]:5.12065800282E-1,2[&rate=4.6709171425443104E-4]:2.241216187038E0)[&rate=6.433413636822148E-4]:6.647920928092E0,5[&rate=4.7730814643396225E-4]:8.88913711513E0)[&rate=0.0011840430001405424]:1.60344407576E0,((7[&rate=5.741447890487345E-4]:7.105263773143E0,1[&rate=3.371589737377878E-4]:7.105263773143E0)[&rate=4.97235949286714E-4]:1.235211851142E0,6[&rate=5.934623935799287E-4]:8.340475624284E0)[&rate=5.934623935799287E-4]:2.152105566606E0)[&rate=7.204240634995306E-4]:5.62067928535E1)[&rate=6.230381645161542E-4]:3.688343883591E0)[&rate=4.6709171425443104E-4]:1.539851173948E0)[&rate=5.358995544791864E-4]:2.808215075386E0,((((11[&rate=5.64558952461444E-4]:1.509452024524E1,29[&rate=6.537196175354604E-4]:1.509452024524E1)[&rate=9.00390345999569E-4]:5.560359041712E1,(33[&rate=8.811181484187512E-4]:6.288030703241E1,13[&rate=4.3490970168402857E-4]:6.288030703241E1)[&rate=5.64558952461444E-4]:7.817803629949E0)[&rate=6.971935726134221E-4]:9.267914621046E-1,(19[&rate=7.990645917452891E-4]:1.225100757866E1,18[&rate=8.139448967919283E-4]:1.225100757866E1)[&rate=3.855580804120216E-4]:5.937389454581E1)[&rate=5.64558952461444E-4]:1.436328272283E0,((10[&rate=6.130786952421026E-4]:2.287285459063E1,31[&rate=4.115211351431631E-4]:2.287285459063E1)[&rate=2.8791798038073607E-4]:4.870936240151E1,23[&rate=5.070120935988487E-4]:7.158221699214E1)[&rate=6.537196175354604E-4]:1.479013404604E0)[&rate=8.458054386742958E-4]:1.674553780571E0)[&rate=8.294967230975612E-4]:1.888770517387E0,(17[&rate=7.710375350690039E-4]:6.71824610561E1,(27[&rate=5.358995544791864E-4]:2.654947947658E1,28[&rate=0.0010541949257423103]:2.654947947658E1)[&rate=7.710375350690039E-4]:4.063298157952E1)[&rate=9.209696802012094E-4]:9.44209363861E0)[&rate=0.0010541949257423103]:4.600285406691E1); +tree STATE_870000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.2057170475,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.2057170475,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.493417010500502E-4]:7.791353937659E0,9[&rate=0.001557620367623235]:7.791353937659E0)[&rate=4.614410768772295E-4]:6.369841425831E0,15[&rate=4.614410768772295E-4]:1.416119536349E1)[&rate=8.69492073058587E-4]:8.978410078825E1,(14[&rate=0.0012449540722595464]:4.284743901432E1,24[&rate=0.0012449540722595464]:4.284743901432E1)[&rate=0.0011880782445117311]:6.109785713742E1)[&rate=7.877293121546733E-4]:1.804246022327E1,(((25[&rate=6.274991794316059E-4]:7.353898119445E1,((((16[&rate=5.343145826798609E-4]:3.404258146905E1,((22[&rate=5.853947012549252E-4]:4.493473487512E0,21[&rate=3.0383899693477026E-4]:4.493473487512E0)[&rate=3.7602845849495244E-4]:3.6116140851E0,20[&rate=9.521784746829063E-4]:8.105087572612E0)[&rate=0.0010998313561239293]:2.593749389644E1)[&rate=0.0011880782445117311]:3.162949772349E1,((30[&rate=8.183188072976597E-4]:4.732596507844E1,26[&rate=5.139131596308786E-4]:4.732596507844E1)[&rate=7.074973499036084E-4]:1.290945112786E1,32[&rate=4.3918672161076533E-4]:6.02354162063E1)[&rate=5.546593802832314E-4]:5.436662986241E0)[&rate=9.76592057479047E-4]:3.914196259611E0,12[&rate=9.76592057479047E-4]:6.958627545215E1)[&rate=4.1560395954885456E-4]:5.986178841108E-1,((((4[&rate=8.345889885042045E-4]:2.248700960113E0,3[&rate=5.75097339214739E-4]:2.248700960113E0)[&rate=4.275978487294785E-4]:1.535232386654E-1,2[&rate=6.719091981385685E-4]:2.402224198778E0)[&rate=6.383396227698032E-4]:6.409881579153E0,5[&rate=8.027223624033441E-4]:8.812105777932E0)[&rate=5.036388536750526E-4]:1.55689301517E0,((7[&rate=2.7535994841271927E-4]:6.901638922428E0,1[&rate=4.7221812779165584E-4]:6.901638922428E0)[&rate=5.036388536750526E-4]:1.222218415549E0,6[&rate=5.75097339214739E-4]:8.123857337977E0)[&rate=8.883349468360984E-4]:2.245141455124E0)[&rate=6.274991794316059E-4]:5.981589454316E1)[&rate=4.932836967294983E-4]:3.354087858187E0)[&rate=0.0010998313561239293]:6.278441597535E-1,((((11[&rate=7.877293121546733E-4]:1.602897494916E1,29[&rate=4.614410768772295E-4]:1.602897494916E1)[&rate=8.516147254041381E-4]:5.055666762737E1,(33[&rate=9.08279963924997E-4]:6.052400809282E1,13[&rate=4.7221812779165584E-4]:6.052400809282E1)[&rate=5.853947012549252E-4]:6.061634483709E0)[&rate=5.343145826798609E-4]:2.60459457382E0,(19[&rate=6.719091981385685E-4]:1.203616954534E1,18[&rate=8.345889885042045E-4]:1.203616954534E1)[&rate=3.8997457354453306E-4]:5.715406760501E1)[&rate=7.877293121546733E-4]:1.920803775918E0,((10[&rate=5.343145826798609E-4]:2.327032116691E1,31[&rate=7.199231328859089E-4]:2.327032116691E1)[&rate=6.493417010500502E-4]:4.723501333558E1,23[&rate=3.610084319417902E-4]:7.050533450249E1)[&rate=3.610084319417902E-4]:6.057064237805E-1)[&rate=5.957667485360641E-4]:3.055784427929E0)[&rate=6.605247489599863E-4]:4.127531265988E0,(17[&rate=9.08279963924997E-4]:7.0424888936E1,(27[&rate=7.593171038305255E-4]:2.589367306633E1,28[&rate=0.001032007165044626]:2.589367306633E1)[&rate=9.08279963924997E-4]:4.453121586967E1)[&rate=5.648578991723382E-4]:7.869467684191E0)[&rate=0.001878877617909416]:4.369339975483E1); +tree STATE_880000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.2893569044,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.2893569044,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.270090291259403E-4]:7.941519732116E0,9[&rate=9.155039759249634E-4]:7.941519732116E0)[&rate=9.364113248952236E-4]:4.921240571048E0,15[&rate=4.261570870151035E-4]:1.286276030316E1)[&rate=8.113029292636956E-4]:8.546136854801E1,(14[&rate=0.0011904928044248774]:4.223426883494E1,24[&rate=8.772471832823891E-4]:4.223426883494E1)[&rate=0.0011904928044248774]:5.608986001624E1)[&rate=3.7132081168030464E-4]:2.156134360977E1,(((25[&rate=5.448701569952396E-4]:7.134917266126E1,((((16[&rate=5.753147644919901E-4]:3.34271393523E1,((22[&rate=3.7132081168030464E-4]:3.526015923613E0,21[&rate=6.376426894487895E-4]:3.526015923613E0)[&rate=0.0015515394805247365]:4.657933900208E0,20[&rate=5.65153320656936E-4]:8.183949823821E0)[&rate=0.0011904928044248774]:2.524318952848E1)[&rate=0.0012462050189168722]:3.120664585439E1,((30[&rate=5.245135121636123E-4]:4.902735740842E1,26[&rate=6.593431285078622E-4]:4.902735740842E1)[&rate=8.427900219674739E-4]:8.334324135003E0,32[&rate=4.828539974301973E-4]:5.736168154343E1)[&rate=4.3818192823472546E-4]:7.27210366326E0)[&rate=5.550111706170533E-4]:2.716383165304E0,((((4[&rate=0.0011904928044248774]:1.768176476935E0,3[&rate=6.593431285078622E-4]:1.768176476935E0)[&rate=5.142550847772849E-4]:3.882383767805E-1,2[&rate=7.17043834558453E-4]:2.156414853716E0)[&rate=0.0010687481350648831]:6.370793268794E0,5[&rate=6.817470149437643E-4]:8.52720812251E0)[&rate=5.142550847772849E-4]:1.555505549442E0,((7[&rate=6.484146534548034E-4]:6.124585522737E0,1[&rate=3.359456067745097E-4]:6.124585522737E0)[&rate=5.957647708950377E-4]:1.488245071772E0,6[&rate=7.683702587208019E-4]:7.61283059451E0)[&rate=4.004357364829392E-4]:2.469883077442E0)[&rate=5.448701569952396E-4]:5.726745470004E1)[&rate=8.958366293917528E-4]:3.755993278507E0,12[&rate=7.964790221197489E-4]:7.11061616505E1)[&rate=5.753147644919901E-4]:2.430110107672E-1)[&rate=9.587582599168864E-4]:9.923576018623E-1,((((11[&rate=8.113029292636956E-4]:1.420240423079E1,29[&rate=8.113029292636956E-4]:1.420240423079E1)[&rate=9.587582599168864E-4]:4.935500226586E1,(33[&rate=6.060869659913458E-4]:5.790162818891E1,13[&rate=4.828539974301973E-4]:5.790162818891E1)[&rate=8.427900219674739E-4]:5.655778307745E0)[&rate=6.704472001384275E-4]:2.536970717882E0,(19[&rate=0.0012462050189168722]:1.132596272287E1,18[&rate=4.93454654492918E-4]:1.132596272287E1)[&rate=4.828539974301973E-4]:5.476841449166E1)[&rate=4.720732681101115E-4]:4.288678075236E0,((10[&rate=9.155039759249634E-4]:2.253519222152E1,31[&rate=6.060869659913458E-4]:2.253519222152E1)[&rate=3.864241375900252E-4]:4.579037120023E1,23[&rate=5.855129318989951E-4]:6.832556342175E1)[&rate=4.720732681101115E-4]:2.057491868019E0)[&rate=2.8491363577103605E-4]:1.958474973354E0)[&rate=9.827945048235228E-4]:4.694909437075E0,(17[&rate=8.267169801273233E-4]:6.598724475902E1,(27[&rate=6.593431285078622E-4]:2.811083580633E1,28[&rate=7.293586221831401E-4]:2.811083580633E1)[&rate=8.772471832823891E-4]:3.787640895269E1)[&rate=4.720732681101115E-4]:1.104919494118E1)[&rate=0.0015515394805247365]:4.284903276074E1); +tree STATE_890000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55155.251432595986,EEF_ucld_branchRates=-266.168517335019,lnP=-55155.251432595986,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.2889524125691884E-4]:9.966285226242E0,9[&rate=8.060698961176745E-4]:9.966285226242E0)[&rate=3.454268860857848E-4]:4.393361858234E0,15[&rate=4.73735411169531E-4]:1.435964708448E1)[&rate=0.001007646336840171]:9.984393819121E1,(14[&rate=0.0011938738313120821]:4.51937544206E1,24[&rate=8.381280558770989E-4]:4.51937544206E1)[&rate=9.336152406331877E-4]:6.900983085509E1)[&rate=7.624074498087509E-4]:1.382796919186E1,(((25[&rate=5.771496034135573E-4]:7.873049603687E1,(((((((4[&rate=4.6290452418879777E-4]:1.743144264124E0,3[&rate=6.744955273107764E-4]:1.743144264124E0)[&rate=9.122702431591241E-4]:8.668466776283E-1,2[&rate=5.463736276724504E-4]:2.609990941752E0)[&rate=0.001251132254463214]:6.847873308336E0,5[&rate=3.9109306588456654E-4]:9.457864250088E0)[&rate=7.356134729295236E-4]:2.522005867896E0,((7[&rate=8.552570328576166E-4]:7.692595680257E0,6[&rate=3.9109306588456654E-4]:7.692595680257E0)[&rate=5.979307182563579E-4]:6.338877782184E-1,1[&rate=0.0010689809086246761]:8.326483458476E0)[&rate=8.381280558770989E-4]:3.653386659508E0)[&rate=8.732434468405376E-4]:5.895308231556E1,((30[&rate=5.979307182563579E-4]:5.180116358097E1,26[&rate=5.875024515519181E-4]:5.180116358097E1)[&rate=6.980908275306392E-4]:9.905466208501E0,32[&rate=5.053155976943182E-4]:6.170662978947E1)[&rate=9.56442745242499E-4]:9.226322644068E0)[&rate=5.566025098128166E-4]:4.177885925914E0,(16[&rate=4.84391113585074E-4]:3.590865696183E1,((22[&rate=0.0015659806923635875]:4.195019440328E0,21[&rate=5.361504266841202E-4]:4.195019440328E0)[&rate=9.56442745242499E-4]:4.04617438565E0,20[&rate=4.0428665774465584E-4]:8.241193825978E0)[&rate=0.0011938738313120821]:2.766746313585E1)[&rate=0.0011938738313120821]:3.920218139763E1)[&rate=2.2871239947086185E-4]:8.947128614426E-1,12[&rate=8.060698961176745E-4]:7.60055512209E1)[&rate=8.060698961176745E-4]:2.724944815968E0)[&rate=0.0011938738313120821]:1.269036028869E0,((((11[&rate=6.630468917428986E-4]:2.071121670816E1,29[&rate=6.190809300122877E-4]:2.071121670816E1)[&rate=8.922019967338077E-4]:5.123700488417E1,(33[&rate=5.463736276724504E-4]:6.568529269011E1,13[&rate=4.73735411169531E-4]:6.568529269011E1)[&rate=7.909875163297657E-4]:6.262928902223E0)[&rate=6.298371507540307E-4]:1.797583625918E0,(19[&rate=5.463736276724504E-4]:1.184201483627E1,18[&rate=5.053155976943182E-4]:1.184201483627E1)[&rate=4.2889524125691884E-4]:6.190379038198E1)[&rate=4.949074857696984E-4]:3.146609559497E0,((10[&rate=4.518563404766492E-4]:2.964778732308E1,31[&rate=6.407377087640634E-4]:2.964778732308E1)[&rate=5.668553197494677E-4]:4.501853792215E1,23[&rate=3.9109306588456654E-4]:7.466632524523E1)[&rate=6.518011382342693E-4]:2.226089532517E0)[&rate=6.630468917428986E-4]:3.107117287984E0)[&rate=4.73735411169531E-4]:4.975424921658E0,(17[&rate=8.217598028144925E-4]:7.464515799391E1,(27[&rate=4.73735411169531E-4]:2.598745928262E1,28[&rate=9.336152406331877E-4]:2.598745928262E1)[&rate=6.630468917428986E-4]:4.86576987113E1)[&rate=0.0011938738313120821]:1.032979899348E1)[&rate=0.0015659806923635875]:4.305659748016E1); +tree STATE_900000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55155.36234602079,EEF_ucld_branchRates=-266.168517335019,lnP=-55155.36234602079,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.049666665182061E-4]:9.278448992417E0,9[&rate=8.934233766363596E-4]:9.278448992417E0)[&rate=8.266677679055688E-4]:4.920977449085E0,15[&rate=0.001073364100857409]:1.41994264415E1)[&rate=8.75759042599956E-4]:7.976824171801E1,(14[&rate=0.0014629415094095342]:3.910888021334E1,24[&rate=0.001103568283713797]:3.910888021334E1)[&rate=0.0012610177488670163]:5.485878794617E1)[&rate=9.118643236653933E-4]:1.973765341028E1,(((25[&rate=5.853831324246747E-4]:7.24586227957E1,(((16[&rate=6.54415634163393E-4]:3.222504429694E1,((22[&rate=0.0017424082294885776]:2.277856145137E0,21[&rate=3.986631944796044E-4]:2.277856145137E0)[&rate=0.0013809180914922145]:4.795324045416E0,20[&rate=4.808284927726108E-4]:7.073180190554E0)[&rate=0.0015732346132823077]:2.515186410639E1)[&rate=0.0010196932944804428]:3.671154925888E1,(((((4[&rate=5.167372286433116E-4]:2.543116060115E0,2[&rate=5.967394599323283E-4]:2.543116060115E0)[&rate=9.311761671013844E-4]:8.434035610724E-2,3[&rate=6.081298722127395E-4]:2.627456416222E0)[&rate=7.965919008582367E-4]:6.707147148141E0,5[&rate=5.167372286433116E-4]:9.334603564363E0)[&rate=6.310902276525526E-4]:1.74616261921E0,((7[&rate=7.681988904520669E-4]:7.168819355912E0,1[&rate=0.0012610177488670163]:7.168819355912E0)[&rate=0.0011732270529503728]:1.314883566E0,6[&rate=5.283630000816983E-4]:8.483702921912E0)[&rate=9.955535630205388E-4]:2.597063261661E0)[&rate=7.281372241599807E-4]:5.710703757132E1,((30[&rate=7.153384287130509E-4]:4.681627228624E1,26[&rate=3.64048647893059E-4]:4.681627228624E1)[&rate=8.587903139205893E-4]:1.148312987043E1,32[&rate=4.2849452098345816E-4]:5.829940215667E1)[&rate=4.930123271183738E-4]:9.888401598223E0)[&rate=3.986631944796044E-4]:7.487898009341E-1)[&rate=0.0010196932944804428]:2.363350556774E0,12[&rate=7.281372241599807E-4]:7.12999441126E1)[&rate=4.5554169277773634E-4]:1.158678683099E0)[&rate=6.54415634163393E-4]:2.567685641726E0,((((11[&rate=4.2849452098345816E-4]:1.910081382064E1,29[&rate=5.853831324246747E-4]:1.910081382064E1)[&rate=7.153384287130509E-4]:5.038579876767E1,(33[&rate=9.118643236653933E-4]:6.067904931313E1,13[&rate=4.5554169277773634E-4]:6.067904931313E1)[&rate=7.02774160984527E-4]:8.807563275182E0)[&rate=0.001315506287664338]:5.83933202369E-1,(19[&rate=8.934233766363596E-4]:1.314186440451E1,18[&rate=9.955535630205388E-4]:1.314186440451E1)[&rate=5.967394599323283E-4]:5.692868138617E1)[&rate=6.782575463847074E-4]:3.147599301812E0,((10[&rate=5.049666665182061E-4]:2.553492997595E1,31[&rate=5.049666665182061E-4]:2.553492997595E1)[&rate=4.930123271183738E-4]:4.660652643189E1,23[&rate=5.626910792859424E-4]:7.214145640784E1)[&rate=6.310902276525526E-4]:1.076688684652E0)[&rate=8.42446993727906E-4]:1.808163344933E0)[&rate=2.375013286622382E-4]:7.188104312662E0,(17[&rate=9.728762244955605E-4]:7.517075829581E1,(27[&rate=6.426979144370994E-4]:2.538841208885E1,28[&rate=9.728762244955605E-4]:2.538841208885E1)[&rate=7.02774160984527E-4]:4.978234620696E1)[&rate=5.398778252923961E-4]:7.043654454278E0)[&rate=0.0013809180914922145]:3.14909088197E1); +tree STATE_910000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.968391203874,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.968391203874,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.6620877109873176E-4]:1.065316195241E1,9[&rate=3.9248977365750285E-4]:1.065316195241E1)[&rate=7.122217956367653E-4]:4.41636372233E0,15[&rate=7.58603921192177E-4]:1.506952567474E1)[&rate=7.757105724939267E-4]:1.008788501231E2,(14[&rate=0.00116754096628117]:4.506741360646E1,24[&rate=7.757105724939267E-4]:4.506741360646E1)[&rate=0.0010060501255807345]:7.088096219141E1)[&rate=4.206989052048068E-4]:1.327005185815E1,(((25[&rate=5.599336829808822E-4]:7.701135214282E1,((((30[&rate=8.801685844439893E-4]:5.210644779827E1,26[&rate=5.40356476094704E-4]:5.210644779827E1)[&rate=5.69967210099984E-4]:7.980022569476E0,32[&rate=3.827683671838401E-4]:6.008647036775E1)[&rate=2.8962122600787517E-4]:1.052941888583E1,(12[&rate=6.714945456435572E-4]:6.652404833493E1,(16[&rate=4.7527391130743497E-4]:2.975402765597E1,((22[&rate=5.69967210099984E-4]:3.302727637011E0,21[&rate=3.6259399025384266E-4]:3.302727637011E0)[&rate=4.0202859886808047E-4]:5.340786517118E0,20[&rate=4.2988844752163104E-4]:8.643514154128E0)[&rate=0.0010060501255807345]:2.111051350184E1)[&rate=0.0011019352536023866]:3.677002067896E1)[&rate=4.8436665379179324E-4]:4.09184091865E0)[&rate=5.69967210099984E-4]:2.561737740664E0,((((4[&rate=4.11421283203048E-4]:2.239110944747E0,2[&rate=7.269563889940388E-4]:2.239110944747E0)[&rate=3.294707391416771E-4]:3.839203595214E-1,3[&rate=7.269563889940388E-4]:2.623031304268E0)[&rate=9.358563579790692E-4]:8.134540261231E0,5[&rate=4.935025083475585E-4]:1.07575715655E1)[&rate=4.11421283203048E-4]:1.237435040997E0,((7[&rate=3.5202144694948534E-4]:7.783759944073E0,6[&rate=7.938336725998552E-4]:7.783759944073E0)[&rate=4.2988844752163104E-4]:5.455708623035E-1,1[&rate=3.410179739749763E-4]:8.329330806377E0)[&rate=8.131265081268483E-4]:3.665675800119E0)[&rate=5.119639862389427E-4]:6.118262038775E1)[&rate=6.845513403308223E-4]:3.833725148578E0)[&rate=0.001690719015487785]:1.617981398433E0,((((11[&rate=3.172245905196809E-4]:1.598081606986E1,29[&rate=5.026966251445938E-4]:1.598081606986E1)[&rate=7.122217956367653E-4]:5.849457966789E1,(33[&rate=6.348636994287061E-4]:6.342549908624E1,13[&rate=3.9248977365750285E-4]:6.342549908624E1)[&rate=5.213195817914506E-4]:1.104989665151E1)[&rate=5.801884376963406E-4]:1.082697942566E0,(19[&rate=0.0010496225259700445]:1.597140251541E1,18[&rate=5.026966251445938E-4]:1.597140251541E1)[&rate=6.588889566018876E-4]:5.958669116491E1)[&rate=6.98108376337816E-4]:1.567827527474E0,((10[&rate=6.233716583741737E-4]:2.290182891667E1,31[&rate=7.122217956367653E-4]:2.290182891667E1)[&rate=3.410179739749763E-4]:5.334632312149E1,23[&rate=5.69967210099984E-4]:7.624815203816E1)[&rate=4.6620877109873176E-4]:8.777691696271E-1)[&rate=4.0202859886808047E-4]:1.503412333469E0)[&rate=2.2941334028975973E-4]:6.193343812733E0,(17[&rate=8.337779881803569E-4]:7.778692294697E1,(27[&rate=5.119639862389427E-4]:3.200009766253E1,28[&rate=0.00116754096628117]:3.200009766253E1)[&rate=4.0202859886808047E-4]:4.578682528445E1)[&rate=8.560247103508053E-4]:7.035754407015E0)[&rate=0.001255771056668636]:4.439575030204E1); +tree STATE_920000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55148.50401538313,EEF_ucld_branchRates=-266.168517335019,lnP=-55148.50401538313,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.264008828754569E-4]:9.28643606785E0,9[&rate=7.560626583127529E-4]:9.28643606785E0)[&rate=2.484443268840059E-4]:4.53998737939E0,15[&rate=3.997274584188984E-4]:1.382642344724E1)[&rate=6.101984194927713E-4]:1.032734742054E2,(14[&rate=0.0011464966730399312]:4.849907047485E1,24[&rate=8.287451790714935E-4]:4.849907047485E1)[&rate=8.287451790714935E-4]:6.860082717782E1)[&rate=3.050967120724908E-4]:6.129795845489E0,(((25[&rate=4.774588259924199E-4]:7.575060779903E1,((((30[&rate=3.997274584188984E-4]:5.077521995253E1,26[&rate=5.137478197233709E-4]:5.077521995253E1)[&rate=7.142956241124897E-4]:8.719855807552E0,32[&rate=2.720304746027499E-4]:5.949507576008E1)[&rate=3.681338298879043E-4]:1.140730504611E1,((((4[&rate=9.941434182057997E-4]:1.891798806422E0,2[&rate=2.720304746027499E-4]:1.891798806422E0)[&rate=3.368105399648728E-4]:9.82518376564E-1,3[&rate=4.21207648371134E-4]:2.874317182986E0)[&rate=2.8328470546368776E-4]:8.218198311758E0,5[&rate=3.2632142268473294E-4]:1.109251549474E1)[&rate=0.0023346673539074757]:7.203529674326E-1,((7[&rate=7.142956241124897E-4]:7.651704168851E0,6[&rate=6.258254652707078E-4]:7.651704168851E0)[&rate=3.1576149979179396E-4]:8.781887217939E-1,1[&rate=7.142956241124897E-4]:8.529892890644E0)[&rate=4.658409906268538E-4]:3.282975571532E0)[&rate=5.264008828754569E-4]:5.908951234401E1)[&rate=0.0014058595119258023]:1.511619154902E0,((16[&rate=2.6044963062934735E-4]:2.995298538716E1,((22[&rate=0.0014058595119258023]:3.104487420774E0,21[&rate=4.431956839588754E-4]:3.104487420774E0)[&rate=7.142956241124897E-4]:3.963689464084E0,20[&rate=2.082244852396709E-4]:7.068176884857E0)[&rate=0.0012150606457854854]:2.28848085023E1)[&rate=8.029359945384383E-4]:3.997181636471E1,12[&rate=8.029359945384383E-4]:6.992480175187E1)[&rate=3.2632142268473294E-4]:2.489198209224E0)[&rate=7.142956241124897E-4]:3.336607837939E0)[&rate=5.264008828754569E-4]:2.341872317242E0,((((11[&rate=4.1041327878044E-4]:1.652801984428E1,29[&rate=9.546484531703352E-4]:1.652801984428E1)[&rate=4.658409906268538E-4]:5.318283559356E1,(33[&rate=6.589389765393048E-4]:6.402808645129E1,13[&rate=2.9428710219800495E-4]:6.402808645129E1)[&rate=9.546484531703352E-4]:5.682768986549E0)[&rate=5.264008828754569E-4]:2.091740126528E0,(19[&rate=3.2632142268473294E-4]:1.75839362648E1,18[&rate=5.951176803168488E-4]:1.75839362648E1)[&rate=4.431956839588754E-4]:5.421865929957E1)[&rate=2.082244852396709E-4]:3.180218586179E0,((10[&rate=5.393756492666526E-4]:2.710136631095E1,31[&rate=7.560626583127529E-4]:2.710136631095E1)[&rate=3.2632142268473294E-4]:4.637339891874E1,23[&rate=4.431956839588754E-4]:7.347476522969E1)[&rate=4.321289574893582E-4]:1.508048920859E0)[&rate=3.4725850601340774E-4]:3.109665965725E0)[&rate=0.0011464966730399312]:2.394429794036E0,(17[&rate=8.863986243597007E-4]:7.249838631875E1,(27[&rate=1.5131405641961358E-4]:3.026491490702E1,28[&rate=0.0011464966730399312]:3.026491490702E1)[&rate=6.76554237598349E-4]:4.223347141173E1)[&rate=3.4725850601340774E-4]:7.98852359156E0)[&rate=0.0017872583174147808]:4.274278358785E1); +tree STATE_930000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55131.59860775896,EEF_ucld_branchRates=-266.168517335019,lnP=-55131.59860775896,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.306012800252581E-4]:7.213687636348E0,9[&rate=5.861174742267083E-4]:7.213687636348E0)[&rate=7.606574067669981E-4]:8.874903099499E0,15[&rate=9.157114070895015E-4]:1.608859073585E1)[&rate=8.306012800252581E-4]:9.495614236845E1,(14[&rate=0.001190711584254777]:4.884553192923E1,24[&rate=6.342727343788983E-4]:4.884553192923E1)[&rate=0.001060968202744154]:6.219920117507E1)[&rate=3.841891764680352E-4]:3.998606964009E0,(((25[&rate=6.59794083153021E-4]:7.151634401412E1,((((30[&rate=9.669224981676951E-4]:5.089480182972E1,26[&rate=5.406686659087487E-4]:5.089480182972E1)[&rate=0.0015224380449208466]:7.426678184291E0,32[&rate=4.529977803298421E-4]:5.832148001401E1)[&rate=3.5893224441887523E-4]:9.856239952788E0,((((4[&rate=0.0014043336010761054]:1.947678100918E0,2[&rate=9.669224981676951E-4]:1.947678100918E0)[&rate=5.518450634211008E-4]:1.704710261733E0,3[&rate=3.454853862208925E-4]:3.652388362651E0)[&rate=8.119608544227841E-4]:6.001604931763E0,5[&rate=3.71791945750637E-4]:9.653993294414E0)[&rate=7.941454243253212E-4]:2.928684272001E0,((7[&rate=5.076246849850297E-4]:7.034129667086E0,6[&rate=7.606574067669981E-4]:7.034129667086E0)[&rate=5.518450634211008E-4]:8.883568549422E-1,1[&rate=5.185769953314012E-4]:7.922486522028E0)[&rate=4.1945386011925194E-4]:4.660191044387E0)[&rate=6.219082282704042E-4]:5.559504240038E1)[&rate=2.590971985978672E-4]:1.773093243095E0,((16[&rate=4.307682850992932E-4]:3.221173663642E1,((22[&rate=4.4193785483551004E-4]:3.239986683506E0,21[&rate=2.3130458582499395E-4]:3.239986683506E0)[&rate=0.0011417543207619218]:3.021653860288E0,20[&rate=4.307682850992932E-4]:6.261640543794E0)[&rate=0.0011417543207619218]:2.595009609262E1)[&rate=0.001248006779432821]:3.411408777783E1,12[&rate=7.148010530934151E-4]:6.632582441425E1)[&rate=5.518450634211008E-4]:3.624988795645E0)[&rate=0.0014043336010761054]:1.565530804222E0)[&rate=4.1945386011925194E-4]:3.561942729801E0,((((11[&rate=8.925676498670243E-4]:1.721635169221E1,29[&rate=4.529977803298421E-4]:1.721635169221E1)[&rate=8.119608544227841E-4]:5.155764303879E1,(33[&rate=7.004730070518115E-4]:6.089475784864E1,13[&rate=4.307682850992932E-4]:6.089475784864E1)[&rate=5.185769953314012E-4]:7.879236882358E0)[&rate=8.707756408664671E-4]:7.74640690559E-1,(19[&rate=6.219082282704042E-4]:1.64795486297E1,18[&rate=6.219082282704042E-4]:1.64795486297E1)[&rate=3.1607154622755664E-4]:5.306908679186E1)[&rate=5.295854361210119E-4]:3.850465859863E0,((10[&rate=5.861174742267083E-4]:2.504509479919E1,31[&rate=9.955605926304564E-4]:2.504509479919E1)[&rate=3.71791945750637E-4]:4.723820137262E1,23[&rate=4.529977803298421E-4]:7.228329617181E1)[&rate=8.925676498670243E-4]:1.115805109616E0)[&rate=4.4193785483551004E-4]:1.679185462494E0)[&rate=6.342727343788983E-4]:1.598540437058E0,(17[&rate=7.606574067669981E-4]:6.754671067246E1,(27[&rate=8.306012800252581E-4]:2.395586593991E1,28[&rate=8.306012800252581E-4]:2.395586593991E1)[&rate=5.861174742267083E-4]:4.359084473256E1)[&rate=4.1945386011925194E-4]:9.130116508509E0)[&rate=0.001705367972151901]:3.836651288734E1); +tree STATE_940000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55150.93944885596,EEF_ucld_branchRates=-266.168517335019,lnP=-55150.93944885596,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.873273932550877E-4]:9.708663436499E0,9[&rate=9.008253979061525E-4]:9.708663436499E0)[&rate=3.9975668380656066E-4]:6.003311183336E0,15[&rate=3.3206066220827917E-4]:1.571197461984E1)[&rate=6.138146188843057E-4]:1.070978114372E2,(14[&rate=6.877039636816755E-4]:5.154033312786E1,24[&rate=6.138146188843057E-4]:5.154033312786E1)[&rate=0.0011210012916617552]:7.126945292922E1)[&rate=4.5234433685510656E-4]:2.941074454672E0,(((25[&rate=7.839475477444945E-4]:7.571184350205E1,(12[&rate=8.036276598642631E-4]:7.534523163012E1,((16[&rate=4.6103845011486784E-4]:4.016437465265E1,((22[&rate=0.0010587099465075136]:2.81099937445E0,21[&rate=3.3206066220827917E-4]:2.81099937445E0)[&rate=8.036276598642631E-4]:5.260264294374E0,20[&rate=5.421462346081188E-4]:8.071263668824E0)[&rate=8.248217535640437E-4]:3.209311098382E1)[&rate=9.320305140210363E-4]:3.133882025801E1,(((30[&rate=7.482768651030236E-4]:4.929772112286E1,26[&rate=5.615295537268592E-4]:4.929772112286E1)[&rate=6.742305397386766E-4]:8.643102931871E0,32[&rate=4.7851527130162255E-4]:5.794082405473E1)[&rate=6.488150350328175E-4]:9.571572610037E0,((((4[&rate=6.742305397386766E-4]:2.39844242938E0,2[&rate=5.327033567110465E-4]:2.39844242938E0)[&rate=2.9645766313568224E-4]:1.317990774785E0,3[&rate=3.7222297477077664E-4]:3.716433204165E0)[&rate=3.7222297477077664E-4]:7.995195219693E0,5[&rate=2.4829903990008226E-4]:1.171162842386E1)[&rate=5.517490652295574E-4]:1.5699179315E0,((7[&rate=4.697571329411946E-4]:7.738797344179E0,6[&rate=9.675918635446669E-4]:7.738797344179E0)[&rate=4.5234433685510656E-4]:8.166876504336E-1,1[&rate=3.9073337637363776E-4]:8.555484994612E0)[&rate=7.017671401929575E-4]:4.726061360746E0)[&rate=5.234036998164088E-4]:5.423085030941E1)[&rate=6.612853390459706E-4]:3.990798245896E0)[&rate=7.319616538474341E-4]:3.842036719463E0)[&rate=9.675918635446669E-4]:3.666118719256E-1)[&rate=3.9975668380656066E-4]:2.67243356492E0,((((33[&rate=7.017671401929575E-4]:6.486358681279E1,13[&rate=3.9975668380656066E-4]:6.486358681279E1)[&rate=2.2440142059107558E-4]:7.287571064045E0,(11[&rate=7.017671401929575E-4]:1.905239138394E1,29[&rate=6.367730411880719E-4]:1.905239138394E1)[&rate=7.319616538474341E-4]:5.30987664929E1)[&rate=3.9975668380656066E-4]:1.774179316532E0,(19[&rate=3.815672094687722E-4]:1.798877557378E1,18[&rate=3.9073337637363776E-4]:1.798877557378E1)[&rate=3.426507783246423E-4]:5.593656161959E1)[&rate=4.873273932550877E-4]:2.438510649406E0,((10[&rate=3.2094300955043886E-4]:2.530027125165E1,31[&rate=5.142313441114112E-4]:2.530027125165E1)[&rate=5.517490652295574E-4]:4.993550434208E1,23[&rate=4.962078532512775E-4]:7.523577559373E1)[&rate=5.421462346081188E-4]:1.12807224904E0)[&rate=3.7222297477077664E-4]:2.020429224197E0)[&rate=3.9073337637363776E-4]:3.618081316091E0,(17[&rate=7.017671401929575E-4]:7.102925556464E1,(27[&rate=5.421462346081188E-4]:2.382748815014E1,28[&rate=0.0010587099465075136]:2.382748815014E1)[&rate=4.0866714340899413E-4]:4.72017674145E1)[&rate=9.320305140210363E-4]:1.097310281842E1)[&rate=0.0016164728672015346]:4.374850212868E1); +tree STATE_950000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55151.10687253794,EEF_ucld_branchRates=-266.168517335019,lnP=-55151.10687253794,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.733400106445564E-4]:8.011739726933E0,9[&rate=0.0012031754742512144]:8.011739726933E0)[&rate=4.4341920271890185E-4]:5.401419109279E0,15[&rate=2.912720009263897E-4]:1.341315883621E1)[&rate=8.762102824569377E-4]:1.101571143742E2,(14[&rate=7.592943619057822E-4]:5.000563904019E1,24[&rate=6.145540394226147E-4]:5.000563904019E1)[&rate=0.0012031754742512144]:7.356463417023E1)[&rate=8.385815424580827E-4]:5.314572104775E0,(((25[&rate=8.212416702824886E-4]:7.520709755847E1,(12[&rate=8.212416702824886E-4]:7.101134182073E1,(((16[&rate=6.360373908496868E-4]:3.845924306731E1,((22[&rate=7.889523919556517E-4]:2.466796280363E0,21[&rate=7.059369822834136E-4]:2.466796280363E0)[&rate=0.0010273685195108986]:4.287915904644E0,20[&rate=7.452860288838153E-4]:6.754712185007E0)[&rate=0.0010273685195108986]:3.170453088231E1)[&rate=8.967933417228087E-4]:2.816679845315E1,((((4[&rate=4.327948505180505E-4]:1.540744983411E0,2[&rate=0.0013652372604493594]:1.540744983411E0)[&rate=7.592943619057822E-4]:1.290149201999E0,3[&rate=0.001062165923898783]:2.83089418541E0)[&rate=5.434282551894182E-4]:1.013652592077E1,5[&rate=3.464199625619159E-4]:1.296742010618E1)[&rate=9.188080406094449E-4]:1.836779751744E0,((7[&rate=4.538355649916614E-4]:8.360756423443E0,6[&rate=6.470633387487818E-4]:8.360756423443E0)[&rate=5.23717030628618E-4]:9.881404052304E-1,1[&rate=4.6408436405271465E-4]:9.348896828673E0)[&rate=4.327948505180505E-4]:5.455303029254E0)[&rate=4.4341920271890185E-4]:5.182184166253E1)[&rate=4.10717893345381E-4]:2.094216823152E0,((30[&rate=6.935769023747324E-4]:4.703366864549E1,26[&rate=6.360373908496868E-4]:4.703366864549E1)[&rate=9.96299927418965E-4]:8.468512931171E0,32[&rate=5.633015390468667E-4]:5.550218157666E1)[&rate=6.360373908496868E-4]:1.321807676695E1)[&rate=8.04729749892991E-4]:2.291083477118E0)[&rate=6.470633387487818E-4]:4.19575573774E0)[&rate=3.991322067246575E-4]:8.967626264101E-1,((((33[&rate=5.937017625625744E-4]:6.108672654358E1,13[&rate=2.912720009263897E-4]:6.108672654358E1)[&rate=5.23717030628618E-4]:9.957573483943E0,(11[&rate=4.6408436405271465E-4]:1.678689256976E1,29[&rate=7.738300549397457E-4]:1.678689256976E1)[&rate=9.188080406094449E-4]:5.425740745776E1)[&rate=8.385815424580827E-4]:1.797820226269E0,(19[&rate=5.434282551894182E-4]:2.093400052822E1,18[&rate=5.335607715414979E-4]:2.093400052822E1)[&rate=4.538355649916614E-4]:5.190811972557E1)[&rate=9.425031462154423E-4]:1.281267765847E0,((10[&rate=3.8706207270168265E-4]:2.569063231015E1,31[&rate=4.6408436405271465E-4]:2.569063231015E1)[&rate=4.941477417023862E-4]:4.608403965209E1,23[&rate=3.743816099190181E-4]:7.177467196224E1)[&rate=7.317532439525805E-4]:2.348716057394E0)[&rate=5.335607715414979E-4]:1.980472165244E0)[&rate=4.327948505180505E-4]:3.688437763967E0,(17[&rate=7.889523919556517E-4]:7.015960936284E1,(27[&rate=6.25207565327436E-4]:2.366037461202E1,28[&rate=0.0012031754742512144]:2.366037461202E1)[&rate=4.4341920271890185E-4]:4.649923475081E1)[&rate=6.040580598898777E-4]:9.632688586008E0)[&rate=0.0018201260923608933]:4.909254736634E1); +tree STATE_960000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55151.445745211764,EEF_ucld_branchRates=-266.168517335019,lnP=-55151.445745211764,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.774342232590835E-4]:8.988923542317E0,9[&rate=8.373455421343137E-4]:8.988923542317E0)[&rate=6.463504582071533E-4]:4.468503778731E0,15[&rate=6.463504582071533E-4]:1.345742732105E1)[&rate=8.541148973501455E-4]:1.038855277245E2,(14[&rate=9.869246501522904E-4]:4.752034035663E1,24[&rate=8.065386909008817E-4]:4.752034035663E1)[&rate=6.858257325000437E-4]:6.982261468888E1)[&rate=5.481961913765828E-4]:8.768621607734E0,((((((16[&rate=6.276599944312392E-4]:3.523638498941E1,((22[&rate=4.486050018685509E-4]:2.620928349658E0,21[&rate=6.858257325000437E-4]:2.620928349658E0)[&rate=8.911568458737203E-4]:5.282936286543E0,20[&rate=4.774342232590835E-4]:7.903864636201E0)[&rate=8.719885686906155E-4]:2.73325203532E1)[&rate=7.409494292422671E-4]:3.409632755135E1,(((30[&rate=5.829139963165887E-4]:4.898918348993E1,26[&rate=5.395475085488427E-4]:4.898918348993E1)[&rate=9.344183315110403E-4]:8.850589635395E0,32[&rate=3.00417596860056E-4]:5.783977312533E1)[&rate=4.8662657052996186E-4]:9.136870589759E0,((((4[&rate=7.922748954783151E-4]:1.371117782799E0,2[&rate=0.0012228735377652884]:1.371117782799E0)[&rate=3.269164031784642E-4]:7.225642472913E-1,3[&rate=5.481961913765828E-4]:2.09368203009E0)[&rate=7.655954906643076E-4]:9.037591677246E0,5[&rate=4.3841885289788447E-4]:1.113127370734E1)[&rate=7.655954906643076E-4]:3.044403369943E0,((7[&rate=7.409494292422671E-4]:8.14737955733E0,6[&rate=4.050739014844379E-4]:8.14737955733E0)[&rate=5.395475085488427E-4]:8.244789712372E-1,1[&rate=4.680604679167222E-4]:8.971858528567E0)[&rate=5.134229476339392E-4]:5.203818548712E0)[&rate=4.5846635249893356E-4]:5.280096663781E1)[&rate=7.786512471845842E-4]:2.356068825672E0)[&rate=0.0010977809926034025]:3.436709673166E-1,12[&rate=8.215281341357371E-4]:6.967638350808E1)[&rate=0.0010545644041249588]:1.754222214377E0,25[&rate=5.916962588212703E-4]:7.143060572245E1)[&rate=9.344183315110403E-4]:8.872322218604E-1,((((11[&rate=6.559293138401229E-4]:1.640814092028E1,29[&rate=6.185149456182869E-4]:1.640814092028E1)[&rate=7.292597518863927E-4]:5.117515950076E1,(33[&rate=8.719885686906155E-4]:6.164624085833E1,13[&rate=5.481961913765828E-4]:6.164624085833E1)[&rate=4.680604679167222E-4]:5.93705956271E0)[&rate=6.185149456182869E-4]:8.219712350736E-1,(19[&rate=6.36933088065641E-4]:2.007437958924E1,18[&rate=6.36933088065641E-4]:2.007437958924E1)[&rate=4.1676195542458795E-4]:4.833089206687E1)[&rate=4.1676195542458795E-4]:2.445279770322E0,((10[&rate=4.486050018685509E-4]:2.825034360383E1,31[&rate=4.680604679167222E-4]:2.825034360383E1)[&rate=4.8662657052996186E-4]:4.194706911367E1,23[&rate=3.7909246409665584E-4]:7.01974127175E1)[&rate=7.786512471845842E-4]:6.531387089299E-1)[&rate=5.741869494399372E-4]:1.467286517883E0)[&rate=9.344183315110403E-4]:2.461575153324E0,(17[&rate=7.655954906643076E-4]:6.455266438274E1,(27[&rate=4.774342232590835E-4]:2.493385230914E1,28[&rate=0.0010977809926034025]:2.493385230914E1)[&rate=7.179364062473948E-4]:3.96188120736E1)[&rate=5.568423819011518E-4]:1.02267487149E1)[&rate=0.0015632853854915813]:5.13321635556E1); +tree STATE_970000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.099267745405,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.099267745405,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.7476312293384374E-4]:7.88093604643E0,9[&rate=8.234165193594261E-4]:7.88093604643E0)[&rate=5.352013119603402E-4]:8.419060470606E0,15[&rate=6.372977251980447E-4]:1.629999651704E1)[&rate=6.253467161905357E-4]:1.042091207751E2,(14[&rate=9.73885482454357E-4]:4.89855926709E1,24[&rate=9.482149789272512E-4]:4.89855926709E1)[&rate=0.001064734294280731]:7.152352462122E1)[&rate=4.132491924722523E-4]:5.70434490875E0,((((((16[&rate=3.325855168234456E-4]:3.745750177655E1,((22[&rate=0.0012445048495680379]:2.958836672565E0,21[&rate=3.622725836475443E-4]:2.958836672565E0)[&rate=9.242715992493518E-4]:6.372058155881E0,20[&rate=4.132491924722523E-4]:9.330894828446E0)[&rate=0.0013106719967786703]:2.81266069481E1)[&rate=0.0015064040769493222]:3.081073652827E1,(((((4[&rate=5.90595985930543E-4]:1.589560546844E0,2[&rate=4.699997112232875E-4]:1.589560546844E0)[&rate=5.681518494903769E-4]:4.812500207561E-1,3[&rate=7.144730001125443E-4]:2.0708105676E0)[&rate=4.36508911777722E-4]:1.029963180313E1,5[&rate=4.918226996298926E-4]:1.237044237073E1)[&rate=5.134975624546192E-4]:2.072299784407E0,((7[&rate=4.0118660237130766E-4]:7.694407531288E0,6[&rate=0.0010317001767666007]:7.694407531288E0)[&rate=7.893879944410368E-4]:1.723325791104E0,1[&rate=3.622725836475443E-4]:9.417733322392E0)[&rate=4.36508911777722E-4]:5.025008832746E0)[&rate=6.618796866868943E-4]:5.004888924425E1,((30[&rate=9.242715992493518E-4]:4.883298375917E1,26[&rate=0.0010015852326454616]:4.883298375917E1)[&rate=0.0011425217012434987]:6.548873195541E0,32[&rate=5.793141077656839E-4]:5.538185695471E1)[&rate=8.415721537341447E-4]:9.109774444683E0)[&rate=8.415721537341447E-4]:3.776606905431E0)[&rate=5.461135876863122E-4]:1.956473890156E0,12[&rate=7.893879944410368E-4]:7.022471219498E1)[&rate=0.0013106719967786703]:9.921957230517E-1,25[&rate=8.415721537341447E-4]:7.121690791803E1)[&rate=5.243356771291592E-4]:1.761640858288E0,((((11[&rate=5.352013119603402E-4]:1.499483092035E1,29[&rate=6.618796866868943E-4]:1.499483092035E1)[&rate=8.606117871277955E-4]:5.244872384198E1,(33[&rate=6.135929792866382E-4]:6.157180157286E1,13[&rate=4.4781673365169156E-4]:6.157180157286E1)[&rate=4.2500303787233875E-4]:5.871753189464E0)[&rate=4.36508911777722E-4]:1.600482693617E0,(19[&rate=8.060491788983889E-4]:1.859677580529E1,18[&rate=3.7581090577740894E-4]:1.859677580529E1)[&rate=7.579087902508236E-4]:5.044726165065E1)[&rate=6.618796866868943E-4]:1.192728606725E0,((10[&rate=7.893879944410368E-4]:2.149611147368E1,31[&rate=5.243356771291592E-4]:2.149611147368E1)[&rate=4.2500303787233875E-4]:4.829561904041E1,23[&rate=4.589683883943232E-4]:6.979173051409E1)[&rate=6.494677012290392E-4]:4.450355485773E-1)[&rate=4.589683883943232E-4]:2.741782713652E0)[&rate=6.494677012290392E-4]:2.653594109466E0,(17[&rate=0.001064734294280731]:6.690994039838E1,(27[&rate=7.144730001125443E-4]:2.796460412504E1,28[&rate=9.73885482454357E-4]:2.796460412504E1)[&rate=8.606117871277955E-4]:3.894533627334E1)[&rate=2.463815763482357E-4]:8.722202487405E0)[&rate=0.0016799319767232016]:5.058131931509E1); +tree STATE_980000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.119257220955,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.119257220955,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.547266681989425E-4]:7.34084682182E0,9[&rate=0.0010207062012086647]:7.34084682182E0)[&rate=3.0899340470244894E-4]:9.447031048621E0,15[&rate=4.471952996959634E-4]:1.678787787044E1)[&rate=7.592740278570702E-4]:1.048314020773E2,(14[&rate=0.0012841743133174613]:5.001753827337E1,24[&rate=5.97678091818498E-4]:5.001753827337E1)[&rate=0.0013623509095942155]:7.16017416744E1)[&rate=0.0010520421100225041]:8.253706756757E0,(((((((11[&rate=9.185111377508126E-4]:1.372114565016E1,29[&rate=8.395138687764451E-4]:1.372114565016E1)[&rate=6.547266681989425E-4]:5.43266173983E1,(33[&rate=5.014300080218119E-4]:6.255919439424E1,13[&rate=4.358799103908743E-4]:6.255919439424E1)[&rate=6.667268513744108E-4]:5.488568654223E0)[&rate=2.58339212793783E-4]:1.063197935527E0,(19[&rate=4.800639532682245E-4]:2.15789197371E1,18[&rate=5.331914384283744E-4]:2.15789197371E1)[&rate=4.2430780960699615E-4]:4.753204124689E1)[&rate=4.471952996959634E-4]:2.840960599351E0,((10[&rate=4.124178391945894E-4]:2.015145157923E1,31[&rate=5.437878543307814E-4]:2.015145157923E1)[&rate=3.873573243855133E-4]:5.0807426001E1,23[&rate=5.437878543307814E-4]:7.095887758023E1)[&rate=9.65764734551548E-4]:9.930440031089E-1)[&rate=4.800639532682245E-4]:1.087570120885E0,25[&rate=7.895052613669154E-4]:7.303949170422E1)[&rate=8.395138687764451E-4]:1.109610358467E0,(((16[&rate=4.358799103908743E-4]:3.836770442352E1,((22[&rate=8.577280109469006E-4]:3.113881321275E0,21[&rate=6.667268513744108E-4]:3.113881321275E0)[&rate=5.226129809154658E-4]:5.124833688898E0,20[&rate=5.437878543307814E-4]:8.238715010174E0)[&rate=0.0012841743133174613]:3.012898941334E1)[&rate=0.0011256770977273267]:3.220656013215E1,(((((4[&rate=8.577280109469006E-4]:1.925187744345E0,2[&rate=8.0548601226399E-4]:1.925187744345E0)[&rate=8.221298226330341E-4]:2.682665308976E-1,3[&rate=8.0548601226399E-4]:2.193454275243E0)[&rate=4.692483936498823E-4]:8.361958293111E0,5[&rate=3.739593235083868E-4]:1.055541256835E1)[&rate=8.395138687764451E-4]:4.798898146801E0,((7[&rate=8.577280109469006E-4]:9.775628026334E0,6[&rate=6.547266681989425E-4]:9.775628026334E0)[&rate=4.471952996959634E-4]:1.534989515307E0,1[&rate=5.544209738651018E-4]:1.131061754164E1)[&rate=6.667268513744108E-4]:4.043693173515E0)[&rate=6.199891771093966E-4]:5.364401906522E1,((30[&rate=6.914978334420134E-4]:5.098192502554E1,26[&rate=4.692483936498823E-4]:5.098192502554E1)[&rate=0.0011256770977273267]:8.593362866996E0,32[&rate=3.445076198274998E-4]:5.957528789254E1)[&rate=9.185111377508126E-4]:9.423041887838E0)[&rate=3.873573243855133E-4]:1.575934775289E0)[&rate=9.65764734551548E-4]:1.831781947074E0,12[&rate=7.043213591352969E-4]:7.240604650274E1)[&rate=5.758693612351338E-4]:1.74305555995E0)[&rate=6.313791698762709E-4]:2.695891137715E0,(17[&rate=0.0010520421100225041]:6.192242243193E1,(27[&rate=5.758693612351338E-4]:2.783122428618E1,28[&rate=9.185111377508126E-4]:2.783122428618E1)[&rate=9.65764734551548E-4]:3.409119814574E1)[&rate=4.358799103908743E-4]:1.492257076848E1)[&rate=0.0016294756084552337]:5.302799350411E1); +tree STATE_990000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55133.54873380309,EEF_ucld_branchRates=-266.168517335019,lnP=-55133.54873380309,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.9147285856247195E-4]:8.173183096519E0,9[&rate=8.143781828224616E-4]:8.173183096519E0)[&rate=4.156474322614012E-4]:8.735495367781E0,15[&rate=5.115583619712337E-4]:1.69086784643E1)[&rate=8.8064112061869E-4]:1.010836425687E2,(14[&rate=0.0010555537481518865]:4.972838070335E1,24[&rate=0.0010207836918755067]:4.972838070335E1)[&rate=0.0011355154828000444]:6.826394032966E1)[&rate=4.993742632883034E-4]:1.178592184822E1,((((((16[&rate=2.470870355411002E-4]:4.284381472516E1,((22[&rate=6.435980992640667E-4]:3.658796743773E0,21[&rate=4.276063177870558E-4]:3.658796743773E0)[&rate=3.4086869728733045E-4]:4.460158187041E0,20[&rate=5.747037934758157E-4]:8.118954930815E0)[&rate=0.0014553993534517848]:3.472485979435E1)[&rate=0.0017185997004242387]:3.038537724325E1,(((30[&rate=9.589879795261333E-4]:4.924259479887E1,26[&rate=4.036147393243707E-4]:4.924259479887E1)[&rate=9.589879795261333E-4]:1.198862952761E1,32[&rate=3.6669064370178326E-4]:6.123122432648E1)[&rate=6.734977004948781E-4]:1.030645103532E1,((((4[&rate=2.470870355411002E-4]:2.119115937468E0,2[&rate=6.435980992640667E-4]:2.119115937468E0)[&rate=0.0019576056538517595]:7.767462627953E-1,3[&rate=0.0010207836918755067]:2.895862200263E0)[&rate=5.87927518630544E-4]:1.067372106625E1,5[&rate=3.2737359499432497E-4]:1.356958326651E1)[&rate=6.435980992640667E-4]:1.850617275052E0,((7[&rate=4.5142435226431436E-4]:9.149432083017E0,6[&rate=8.574231350838069E-4]:9.149432083017E0)[&rate=4.872901086235675E-4]:2.254788394284E0,1[&rate=3.539438902590613E-4]:1.14042204773E1)[&rate=8.143781828224616E-4]:4.015980064259E0)[&rate=6.292102681220622E-4]:5.611747482024E1)[&rate=0.0010935679185995952]:1.691516606609E0)[&rate=6.014027757605835E-4]:1.348945149704E0,12[&rate=9.589879795261333E-4]:7.457813711812E1)[&rate=7.051372855936251E-4]:1.43428163821E0,25[&rate=5.87927518630544E-4]:7.601241875633E1)[&rate=4.993742632883034E-4]:1.069927573256E0,((((11[&rate=8.143781828224616E-4]:1.337707797553E1,29[&rate=0.0012352829368172881]:1.337707797553E1)[&rate=9.051823307353437E-4]:5.605812824541E1,(33[&rate=8.8064112061869E-4]:6.181080479531E1,13[&rate=3.6669064370178326E-4]:6.181080479531E1)[&rate=3.7918090429176914E-4]:7.624401425628E0)[&rate=4.036147393243707E-4]:1.925606415298E0,(19[&rate=6.583493221634288E-4]:2.179601353008E1,18[&rate=5.115583619712337E-4]:2.179601353008E1)[&rate=5.115583619712337E-4]:4.956479910616E1)[&rate=7.38860436057362E-4]:2.021374505021E0,((10[&rate=8.353779839440136E-4]:2.08041030607E1,31[&rate=0.0011823240764984584]:2.08041030607E1)[&rate=4.276063177870558E-4]:5.074921830633E1,23[&rate=3.7918090429176914E-4]:7.155332136702E1)[&rate=3.1333848451668196E-4]:1.828865774237E0)[&rate=3.9147285856247195E-4]:3.700159188321E0)[&rate=5.238630524555457E-4]:4.223960165094E0,(17[&rate=8.353779839440136E-4]:7.12757882786E1,(27[&rate=4.5142435226431436E-4]:3.325810315451E1,28[&rate=9.589879795261333E-4]:3.325810315451E1)[&rate=8.353779839440136E-4]:3.801768512409E1)[&rate=1.9772198890520554E-4]:1.003051821608E1)[&rate=0.0014553993534517848]:4.847193638655E1); +tree STATE_1000000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55125.22243813254,EEF_ucld_branchRates=-266.168517335019,lnP=-55125.22243813254,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.870675576725991E-4]:1.035757468532E1,9[&rate=7.557063430088424E-4]:1.035757468532E1)[&rate=7.557063430088424E-4]:8.237443843527E0,15[&rate=8.238268021007333E-4]:1.859501852885E1)[&rate=9.360337275730053E-4]:9.836447082196E1,(14[&rate=8.861830379416186E-4]:4.901842308552E1,24[&rate=8.238268021007333E-4]:4.901842308552E1)[&rate=9.644529355256395E-4]:6.794106626529E1)[&rate=5.021049972839778E-4]:1.268384449135E1,((((((16[&rate=4.339744835000574E-4]:3.604734109439E1,((22[&rate=9.959122153919027E-4]:2.612917216353E0,21[&rate=0.0014867199302725557]:2.612917216353E0)[&rate=0.0013405846120301836]:5.467517245005E0,20[&rate=8.861830379416186E-4]:8.080434461357E0)[&rate=0.0011747085371819831]:2.796690663304E1)[&rate=7.880649972032026E-4]:3.603871837878E1,(((30[&rate=8.054660641717311E-4]:5.360939647702E1,26[&rate=6.033205621939455E-4]:5.360939647702E1)[&rate=4.634025379529171E-4]:8.337514710909E0,32[&rate=3.467032502198617E-4]:6.194691118793E1)[&rate=3.467032502198617E-4]:9.406547195359E0,((((4[&rate=6.604853385796559E-4]:2.008508048746E0,2[&rate=4.339744835000574E-4]:2.008508048746E0)[&rate=5.021049972839778E-4]:7.716888048485E-1,3[&rate=4.634025379529171E-4]:2.780196853595E0)[&rate=4.634025379529171E-4]:1.072904719664E1,5[&rate=2.870675576725991E-4]:1.350924405023E1)[&rate=7.405719758329578E-4]:1.470408003754E0,((7[&rate=3.928420305712747E-4]:8.392235811655E0,6[&rate=7.71510256535312E-4]:8.392235811655E0)[&rate=3.706970011349665E-4]:7.173346897529E-1,1[&rate=5.716493391438741E-4]:9.109570501408E0)[&rate=1.9745008977640796E-4]:5.870081552579E0)[&rate=6.142571954928735E-4]:5.63738063293E1)[&rate=4.137957265489842E-4]:7.32601089889E-1)[&rate=8.054660641717311E-4]:2.153022182015E0,12[&rate=8.432832487960325E-4]:7.423908165519E1)[&rate=6.985329384777212E-4]:1.443394211062E0,25[&rate=5.118152505654139E-4]:7.568247586625E1)[&rate=6.033205621939455E-4]:1.581873609417E0,((((11[&rate=6.033205621939455E-4]:1.383562747278E1,29[&rate=4.730935690068522E-4]:1.383562747278E1)[&rate=7.557063430088424E-4]:5.422697950926E1,(33[&rate=7.405719758329578E-4]:5.918780944581E1,13[&rate=4.536679235900427E-4]:5.918780944581E1)[&rate=4.339744835000574E-4]:8.874797536221E0)[&rate=4.034378854345923E-4]:1.866015552665E0,(19[&rate=5.614088960304666E-4]:2.001865298895E1,18[&rate=4.034378854345923E-4]:2.001865298895E1)[&rate=6.142571954928735E-4]:4.990996954575E1)[&rate=5.118152505654139E-4]:6.57801272559E0,((10[&rate=6.033205621939455E-4]:2.12180304884E1,31[&rate=6.368260522109144E-4]:2.12180304884E1)[&rate=4.034378854345923E-4]:5.245661806997E1,23[&rate=5.215735162646684E-4]:7.367464855837E1)[&rate=4.339744835000574E-4]:2.831986701917E0)[&rate=0.0010714426411223908]:7.577142153839E-1)[&rate=3.928420305712747E-4]:5.450592522967E0,(17[&rate=5.716493391438741E-4]:7.201493522365E1,(27[&rate=8.238268021007333E-4]:2.871849857043E1,28[&rate=7.557063430088424E-4]:2.871849857043E1)[&rate=8.432832487960325E-4]:4.329643665322E1)[&rate=5.118152505654139E-4]:1.070000677499E1)[&rate=0.0011747085371819831]:4.692839184352E1); +tree STATE_1010000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55120.6002295403,EEF_ucld_branchRates=-266.168517335019,lnP=-55120.6002295403,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.903144721201903E-4]:1.042544895684E1,9[&rate=6.261244713629012E-4]:1.042544895684E1)[&rate=5.775147548618147E-4]:5.80576926096E0,15[&rate=6.136060948901627E-4]:1.62312182178E1)[&rate=8.940757175416415E-4]:9.922099316108E1,(14[&rate=0.0010053563641445483]:4.841910493554E1,24[&rate=8.285342728524506E-4]:4.841910493554E1)[&rate=8.089936993277209E-4]:6.703310644334E1)[&rate=8.285342728524506E-4]:1.322585863414E1,((((((16[&rate=3.903144721201903E-4]:3.828884718836E1,((22[&rate=0.001039734960929364]:3.476175402261E0,21[&rate=5.10015990005466E-4]:3.476175402261E0)[&rate=0.0010779379805749114]:4.914718509595E0,20[&rate=1.748070996359765E-4]:8.390893911855E0)[&rate=0.0012978002512941788]:2.989795327651E1)[&rate=9.740797446322901E-4]:3.45753241067E1,(((30[&rate=7.903878780782313E-4]:5.116716036018E1,26[&rate=5.209603668532543E-4]:5.116716036018E1)[&rate=0.0012978002512941788]:7.725055620049E0,32[&rate=4.56110324941187E-4]:5.889221598023E1)[&rate=3.291715914107245E-4]:1.285948580928E1,((((4[&rate=4.12705961962952E-4]:2.93582931845E0,2[&rate=4.56110324941187E-4]:2.93582931845E0)[&rate=2.450865415812791E-4]:3.305101534236E-1,3[&rate=8.285342728524506E-4]:3.266339471873E0)[&rate=7.903878780782313E-4]:8.26000835845E0,5[&rate=3.903144721201903E-4]:1.152634783032E1)[&rate=7.234878637271453E-4]:4.513850456929E0,((7[&rate=3.903144721201903E-4]:8.761176488842E0,6[&rate=4.015976310636382E-4]:8.761176488842E0)[&rate=4.12705961962952E-4]:1.048561646216E0,1[&rate=4.2367926175457905E-4]:9.809738135059E0)[&rate=0.001505551372568411]:6.230460152193E0)[&rate=6.389280550313043E-4]:5.571150350225E1)[&rate=3.5488888316876325E-4]:1.112469505549E0)[&rate=7.726155329826111E-4]:2.687351308304E0,12[&rate=8.940757175416415E-4]:7.555152260336E1)[&rate=4.2367926175457905E-4]:2.852398846775E0,25[&rate=7.726155329826111E-4]:7.840392145014E1)[&rate=5.658975116679521E-4]:8.455988946389E-1,((((11[&rate=6.793396491512761E-4]:1.400549607063E1,29[&rate=6.01347317356406E-4]:1.400549607063E1)[&rate=8.709191418707708E-4]:5.35667483986E1,(33[&rate=8.709191418707708E-4]:6.047980118067E1,13[&rate=5.320024467706047E-4]:6.047980118067E1)[&rate=3.903144721201903E-4]:7.092443288557E0)[&rate=3.291715914107245E-4]:5.59379701143E0,(19[&rate=4.345517048235722E-4]:2.408516097331E1,18[&rate=2.6623725938250496E-4]:2.408516097331E1)[&rate=4.56110324941187E-4]:4.908088050734E1)[&rate=8.089936993277209E-4]:3.332912007366E0,((10[&rate=6.136060948901627E-4]:2.04138871157E1,31[&rate=4.991511534489875E-4]:2.04138871157E1)[&rate=4.991511534489875E-4]:5.410939028226E1,23[&rate=4.668472142727088E-4]:7.452327739796E1)[&rate=8.709191418707708E-4]:1.975676090056E0)[&rate=6.261244713629012E-4]:2.750566856755E0)[&rate=9.453668911413456E-4]:4.51163651019E0,(17[&rate=5.775147548618147E-4]:7.695309843141E1,(27[&rate=5.10015990005466E-4]:3.115151110414E1,28[&rate=0.0012978002512941788]:3.115151110414E1)[&rate=6.520445336261696E-4]:4.580158732727E1)[&rate=8.285342728524506E-4]:6.808058423555E0)[&rate=0.0013859456784206473]:4.491691315806E1); +tree STATE_1020000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55131.977504188566,EEF_ucld_branchRates=-266.168517335019,lnP=-55131.977504188566,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.752520877308332E-4]:8.550461661567E0,9[&rate=7.934540631225069E-4]:8.550461661567E0)[&rate=7.401713981203268E-4]:7.765071685622E0,15[&rate=4.792763237443705E-4]:1.631553334719E1)[&rate=8.338283471843342E-4]:9.981809616086E1,(14[&rate=0.0011736288586194706]:4.64281517727E1,24[&rate=9.618230653288149E-4]:4.64281517727E1)[&rate=0.001239958960334047]:6.970547773535E1)[&rate=8.130729917411737E-4]:1.3168954439E1,((((((16[&rate=4.071558949319246E-4]:3.850902181957E1,((22[&rate=0.0014373423907030366]:2.197900847021E0,21[&rate=8.558821168678292E-4]:2.197900847021E0)[&rate=7.748368441311496E-4]:5.423672599098E0,20[&rate=5.213044845205424E-4]:7.621573446119E0)[&rate=0.001239958960334047]:3.088744837345E1)[&rate=0.00103088864885205]:3.336377341543E1,(((30[&rate=5.541000429215384E-4]:4.7435251004E1,26[&rate=6.512472786987255E-4]:4.7435251004E1)[&rate=7.401713981203268E-4]:1.16392750241E1,32[&rate=3.752520877308332E-4]:5.90745260281E1)[&rate=4.792763237443705E-4]:1.025736704599E1,((((4[&rate=2.7379787378284176E-4]:1.891765672297E0,3[&rate=6.004869317784236E-4]:1.891765672297E0)[&rate=7.748368441311496E-4]:2.642405489593E-1,2[&rate=0.001239958960334047]:2.156006221256E0)[&rate=4.071558949319246E-4]:1.194007741113E1,5[&rate=3.860427047608031E-4]:1.409608363239E1)[&rate=5.00106106196758E-4]:1.741412741926E0,((7[&rate=2.5647195349554107E-4]:8.086043045712E0,6[&rate=3.9666458759515425E-4]:8.086043045712E0)[&rate=3.860427047608031E-4]:1.589771877743E0,1[&rate=3.529735760717925E-4]:9.675814923454E0)[&rate=8.130729917411737E-4]:6.161681450861E0)[&rate=4.6895607353647896E-4]:5.349439669978E1)[&rate=4.4841437394835357E-4]:2.54090216091E0)[&rate=8.558821168678292E-4]:8.397268558714E-1,12[&rate=9.945393949109423E-4]:7.271252209087E1)[&rate=3.4136217092521105E-4]:1.024817333236E0,25[&rate=8.338283471843342E-4]:7.373733942411E1)[&rate=3.1674878477869477E-4]:3.406514732217E0,((((11[&rate=4.3815434112214383E-4]:2.129893722418E1,29[&rate=5.885428443725595E-4]:2.129893722418E1)[&rate=6.004869317784236E-4]:4.858760058762E1,(33[&rate=8.794315310991369E-4]:5.679346988191E1,13[&rate=3.1674878477869477E-4]:5.679346988191E1)[&rate=7.401713981203268E-4]:1.309306792989E1)[&rate=6.933431758011924E-4]:2.324621932332E0,(19[&rate=5.885428443725595E-4]:1.972354565094E1,18[&rate=4.3815434112214383E-4]:1.972354565094E1)[&rate=4.071558949319246E-4]:5.248761409319E1)[&rate=7.401713981203268E-4]:1.336258559015E0,((10[&rate=5.541000429215384E-4]:2.092212535591E1,31[&rate=4.896538089166857E-4]:2.092212535591E1)[&rate=2.3619850712911113E-4]:5.207270657471E1,23[&rate=3.752520877308332E-4]:7.299483193062E1)[&rate=5.430110935025883E-4]:5.525863725243E-1)[&rate=6.127018599879783E-4]:3.59643585318E0)[&rate=4.3815434112214383E-4]:3.922254300372E0,(17[&rate=6.127018599879783E-4]:7.420270146345E1,(27[&rate=4.071558949319246E-4]:3.060086547815E1,28[&rate=8.130729917411737E-4]:3.060086547815E1)[&rate=5.885428443725595E-4]:4.36018359853E1)[&rate=9.945393949109423E-4]:6.863406993251E0)[&rate=8.794315310991369E-4]:4.823647549035E1); +tree STATE_1030000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.6354293579,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.6354293579,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.6941559425179495E-4]:8.186378922423E0,9[&rate=6.464031407847066E-4]:8.186378922423E0)[&rate=5.061929911599962E-4]:6.296730501664E0,15[&rate=6.134607302397474E-4]:1.448310942409E1)[&rate=8.362741118485404E-4]:9.646099097155E1,(14[&rate=0.0012742924071094705]:4.454063379608E1,24[&rate=6.820639382506874E-4]:4.454063379608E1)[&rate=0.0011227117085937555]:6.640346659956E1)[&rate=9.908584346661135E-4]:8.784792558563E0,((((((16[&rate=3.4844128382660665E-4]:3.818287300225E1,((22[&rate=9.030115307697507E-4]:2.942091360127E0,21[&rate=3.3588287238860734E-4]:2.942091360127E0)[&rate=3.8233840133932416E-4]:5.02621505051E0,20[&rate=8.789961195588283E-4]:7.968306410637E0)[&rate=7.989550575156367E-4]:3.021456659161E1)[&rate=0.0010279058965115394]:3.000942010434E1,(((30[&rate=7.355017372522286E-4]:4.602515252634E1,26[&rate=5.061929911599962E-4]:4.602515252634E1)[&rate=7.656715465047379E-4]:8.121814389845E0,32[&rate=6.029603923866958E-4]:5.414696691619E1)[&rate=8.568492438141847E-4]:9.131853526697E0,((((4[&rate=7.818743213080396E-4]:2.179438360063E0,2[&rate=7.077928711158399E-4]:2.179438360063E0)[&rate=4.029366747511004E-4]:5.156948343054E-1,3[&rate=6.029603923866958E-4]:2.695133194369E0)[&rate=0.0011227117085937555]:1.086532218654E1,5[&rate=3.715296819835555E-4]:1.356045538091E1)[&rate=6.029603923866958E-4]:1.791292544782E0,((7[&rate=4.029366747511004E-4]:8.690293823264E0,6[&rate=5.628004663485998E-4]:8.690293823264E0)[&rate=7.213729655281962E-4]:2.596135941345E0,1[&rate=3.4844128382660665E-4]:1.128642976461E1)[&rate=4.321344258575211E-4]:4.065318161078E0)[&rate=7.213729655281962E-4]:4.79270725172E1)[&rate=4.8779240248801066E-4]:4.9134726637E0)[&rate=7.989550575156367E-4]:9.143684909511E-1,12[&rate=7.656715465047379E-4]:6.910666159754E1)[&rate=4.321344258575211E-4]:2.802289698461E0,25[&rate=8.170380154705676E-4]:7.1908951296E1)[&rate=4.029366747511004E-4]:9.977815272249E-1,((((11[&rate=5.154428518793253E-4]:1.670109551317E1,29[&rate=4.321344258575211E-4]:1.670109551317E1)[&rate=8.568492438141847E-4]:4.949742727488E1,(33[&rate=9.292823744853958E-4]:5.332322811681E1,13[&rate=5.531303020741833E-4]:5.332322811681E1)[&rate=4.128502606666994E-4]:1.287529467125E1)[&rate=4.22570282567127E-4]:9.554924437596E-1,(19[&rate=6.134607302397474E-4]:1.556064663713E1,18[&rate=6.029603923866958E-4]:1.556064663713E1)[&rate=3.075197153665836E-4]:5.159336859469E1)[&rate=4.6019212910736244E-4]:2.07553039564E0,((10[&rate=7.656715465047379E-4]:2.058142152333E1,31[&rate=4.6019212910736244E-4]:2.058142152333E1)[&rate=5.926633724480712E-4]:4.792719002521E1,23[&rate=4.321344258575211E-4]:6.850861154855E1)[&rate=4.128502606666994E-4]:7.209340789098E-1)[&rate=5.341186688021905E-4]:3.677187195766E0)[&rate=4.509191789110659E-4]:3.372681619596E0,(17[&rate=8.170380154705676E-4]:7.01020751622E1,(27[&rate=2.709393724228811E-4]:3.395683359181E1,28[&rate=0.0011227117085937555]:3.395683359181E1)[&rate=4.786095425861748E-4]:3.614524157039E1)[&rate=5.628004663485998E-4]:6.177339280621E0)[&rate=7.355017372522286E-4]:4.344947851139E1); +tree STATE_1040000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55145.62329388022,EEF_ucld_branchRates=-266.168517335019,lnP=-55145.62329388022,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.0795237044420527E-4]:9.062316810232E0,9[&rate=8.192645376778376E-4]:9.062316810232E0)[&rate=5.193206508351399E-4]:7.156625987809E0,15[&rate=6.238740476065959E-4]:1.621894279804E1)[&rate=5.803756644118637E-4]:1.011126797603E2,(14[&rate=0.0010502523190345833]:4.408148876407E1,24[&rate=0.0011972492984395381]:4.408148876407E1)[&rate=8.791321515147539E-4]:7.325013379431E1)[&rate=4.193860488799674E-4]:1.172743691235E1,(((((((((4[&rate=4.699478787643002E-4]:1.94373096767E0,2[&rate=0.0010914639830022649]:1.94373096767E0)[&rate=6.238740476065959E-4]:3.141740002573E-1,3[&rate=4.896878201165674E-4]:2.257904967927E0)[&rate=4.798289667922035E-4]:1.215165759508E1,5[&rate=5.193206508351399E-4]:1.440956256301E1)[&rate=8.192645376778376E-4]:2.331719303199E0,((7[&rate=6.127072449953287E-4]:1.149894478238E1,6[&rate=3.377992908689067E-4]:1.149894478238E1)[&rate=6.710866413041057E-4]:1.154839516881E0,1[&rate=3.9803849758608266E-4]:1.265378429926E1)[&rate=5.494011306060874E-4]:4.087497566953E0)[&rate=4.399495727551741E-4]:5.188333871872E1,(((30[&rate=4.297452246099698E-4]:4.869790811376E1,26[&rate=7.529200121402888E-4]:4.869790811376E1)[&rate=0.0011972492984395381]:1.101001961293E1,32[&rate=6.127072449953287E-4]:5.970792772669E1)[&rate=6.238740476065959E-4]:7.518995590862E0,(16[&rate=3.510544588047483E-4]:3.792423250359E1,((22[&rate=8.57940329183972E-4]:2.525238733729E0,21[&rate=5.909778758734497E-4]:2.525238733729E0)[&rate=6.966045703368608E-4]:5.125432010756E0,20[&rate=8.380409535533102E-4]:7.650670744485E0)[&rate=7.683899576383563E-4]:3.02735617591E1)[&rate=0.0010914639830022649]:2.930269081396E1)[&rate=3.6356042594422436E-4]:1.39769726738E0)[&rate=4.193860488799674E-4]:3.639703775493E0,12[&rate=4.995439665324221E-4]:7.226432436042E1)[&rate=4.798289667922035E-4]:1.340632540031E0,25[&rate=8.014716337944421E-4]:7.360495690045E1)[&rate=4.5003261158131695E-4]:8.907756300275E-1,((((11[&rate=6.46921227093552E-4]:1.868100573563E1,29[&rate=3.8694600489515177E-4]:1.868100573563E1)[&rate=9.262816579378247E-4]:4.828513360328E1,(33[&rate=8.57940329183972E-4]:5.546713391773E1,13[&rate=4.399495727551741E-4]:5.546713391773E1)[&rate=7.683899576383563E-4]:1.149900542119E1)[&rate=8.192645376778376E-4]:2.494769355021E0,(19[&rate=7.380646833279046E-4]:1.735780303047E1,18[&rate=8.791321515147539E-4]:1.735780303047E1)[&rate=4.193860488799674E-4]:5.210310566347E1)[&rate=5.803756644118637E-4]:1.667692581334E0,((10[&rate=9.018253482663168E-4]:2.035594210759E1,31[&rate=6.352708806988719E-4]:2.035594210759E1)[&rate=2.6965735733400345E-4]:5.005781479451E1,23[&rate=4.6002346673404415E-4]:7.04137569021E1)[&rate=4.0883277474502576E-4]:7.148443731698E-1)[&rate=4.5003261158131695E-4]:3.36713125521E0)[&rate=7.683899576383563E-4]:6.229150990661E0,(17[&rate=9.018253482663168E-4]:7.470471569979E1,(27[&rate=3.7548385611038026E-4]:2.765255464879E1,28[&rate=9.819217350285566E-4]:2.765255464879E1)[&rate=5.292755390462416E-4]:4.705216105099E1)[&rate=8.791321515147539E-4]:6.020167821356E0)[&rate=0.001517160121365993]:4.833417594959E1); +tree STATE_1050000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55140.71766048652,EEF_ucld_branchRates=-266.168517335019,lnP=-55140.71766048652,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.960708476727161E-4]:9.808773305514E0,9[&rate=4.776393701358584E-4]:9.808773305514E0)[&rate=9.654024195225677E-4]:6.086234715942E0,15[&rate=7.436879433949868E-4]:1.589500802146E1)[&rate=5.712047296161358E-4]:1.041703013508E2,(14[&rate=9.104381003403188E-4]:4.043382268289E1,24[&rate=0.0011284928430587066]:4.043382268289E1)[&rate=8.440603404013136E-4]:7.963148668938E1)[&rate=0.0010344782037690352]:9.289068958016E0,((((((16[&rate=4.4021574201124464E-4]:3.88106141339E1,((22[&rate=5.145164181001073E-4]:2.942484065917E0,21[&rate=6.43550139190971E-4]:2.942484065917E0)[&rate=5.424925061917413E-4]:5.171321547008E0,20[&rate=8.86560314005066E-4]:8.113805612924E0)[&rate=0.0011284928430587066]:3.069680852098E1)[&rate=0.0016988018208742778]:3.123193594314E1,(((30[&rate=7.898989465411502E-4]:5.022193798197E1,26[&rate=7.436879433949868E-4]:5.022193798197E1)[&rate=4.2084034026752695E-4]:1.291142411684E1,32[&rate=4.868619105324113E-4]:6.313336209881E1)[&rate=7.436879433949868E-4]:6.574238087986E0,((((4[&rate=3.9015792586891455E-4]:2.179045799886E0,2[&rate=3.7928068216263136E-4]:2.179045799886E0)[&rate=8.440603404013136E-4]:5.836284436975E-1,3[&rate=6.113729960122972E-4]:2.762674243583E0)[&rate=4.4021574201124464E-4]:1.400363808925E1,5[&rate=2.778194730735305E-4]:1.676631233283E1)[&rate=4.2084034026752695E-4]:1.432015540846E0,((7[&rate=4.496963091497279E-4]:1.279937918287E1,6[&rate=4.590777032288949E-4]:1.279937918287E1)[&rate=6.113729960122972E-4]:1.55494728886E0,1[&rate=3.679446349808012E-4]:1.435432647173E1)[&rate=4.496963091497279E-4]:3.844001401944E0)[&rate=7.436879433949868E-4]:5.150927231312E1)[&rate=5.810113354330564E-4]:3.349498902416E-1)[&rate=7.898989465411502E-4]:2.27459540359E0,12[&rate=7.737571185932862E-4]:7.231714548063E1)[&rate=6.66311938289105E-4]:3.546979811635E0,25[&rate=6.43550139190971E-4]:7.586412529227E1)[&rate=4.0066607454615174E-4]:1.198707450069E0,((((33[&rate=8.24914361987709E-4]:5.815820464637E1,13[&rate=2.978471313525928E-4]:5.815820464637E1)[&rate=4.306078997156629E-4]:1.056067700376E1,(11[&rate=6.010775181693174E-4]:1.830947634312E1,29[&rate=4.590777032288949E-4]:1.830947634312E1)[&rate=6.010775181693174E-4]:5.040940530701E1)[&rate=6.547825763610909E-4]:2.672840064703E0,(19[&rate=8.069103554496241E-4]:1.152596652684E1,18[&rate=8.645322480940321E-4]:1.152596652684E1)[&rate=3.4337566472316045E-4]:5.986575518799E1)[&rate=8.440603404013136E-4]:3.601786805055E0,((10[&rate=6.113729960122972E-4]:1.750414687301E1,31[&rate=8.24914361987709E-4]:1.750414687301E1)[&rate=4.960708476727161E-4]:5.635867098973E1,23[&rate=4.4021574201124464E-4]:7.386281786274E1)[&rate=5.237853172032244E-4]:1.130690657146E0)[&rate=4.776393701358584E-4]:2.069324222451E0)[&rate=4.2084034026752695E-4]:4.265920667554E0,(17[&rate=7.160562700414259E-4]:7.460611317771E1,(27[&rate=3.4337566472316045E-4]:2.865049184355E1,28[&rate=9.977074320712477E-4]:2.865049184355E1)[&rate=8.86560314005066E-4]:4.595562133416E1)[&rate=5.810113354330564E-4]:6.722640232182E0)[&rate=7.737571185932862E-4]:4.80256249204E1); +tree STATE_1060000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55119.32416763868,EEF_ucld_branchRates=-266.168517335019,lnP=-55119.32416763868,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.285274060871499E-4]:9.863269922669E0,9[&rate=7.468943558519935E-4]:9.863269922669E0)[&rate=8.129609951706488E-4]:6.010933403088E0,15[&rate=4.3320259746730853E-4]:1.587420332576E1)[&rate=7.782901603250507E-4]:9.876799194555E1,(14[&rate=0.0011518607463929065]:4.542488471103E1,24[&rate=8.518772196445236E-4]:4.542488471103E1)[&rate=6.093554706287133E-4]:6.921731056027E1)[&rate=8.518772196445236E-4]:1.433332672982E1,((((((16[&rate=4.0324770536578696E-4]:4.377359189147E1,((22[&rate=3.71085178077714E-4]:3.306878705164E0,21[&rate=7.468943558519935E-4]:3.306878705164E0)[&rate=9.794384188289314E-4]:5.186642879439E0,20[&rate=0.001097572115914338]:8.493521584603E0)[&rate=7.180869865212477E-4]:3.528007030687E1)[&rate=0.0010135076987645747]:2.719354245251E1,(((30[&rate=7.951638281928086E-4]:5.425142305491E1,26[&rate=4.134126451866991E-4]:5.425142305491E1)[&rate=0.001052338722155302]:8.565542214711E0,32[&rate=4.0324770536578696E-4]:6.281696526963E1)[&rate=5.678193139668634E-4]:6.752237563605E0,((((4[&rate=6.543625047861396E-4]:2.711093125182E0,2[&rate=8.96479293311033E-4]:2.711093125182E0)[&rate=4.525006645342239E-4]:7.139762135097E-1,3[&rate=5.882368508739328E-4]:3.425069338691E0)[&rate=6.093554706287133E-4]:1.207445578971E1,5[&rate=6.313354932256172E-4]:1.54995251284E1)[&rate=5.779497054226304E-4]:3.01315571228E0,((7[&rate=4.3320259746730853E-4]:1.216529303195E1,6[&rate=4.134126451866991E-4]:1.216529303195E1)[&rate=2.426032695607195E-4]:1.250146063844E0,1[&rate=4.809830692282908E-4]:1.341543909579E1)[&rate=7.951638281928086E-4]:5.097241744887E0)[&rate=4.6203425315648514E-4]:5.105652199255E1)[&rate=4.525006645342239E-4]:1.397931510752E0)[&rate=6.313354932256172E-4]:4.039396155719E0,12[&rate=7.782901603250507E-4]:7.50065304997E1)[&rate=3.928443382633107E-4]:1.277939056843E0,25[&rate=5.479600421039498E-4]:7.628446955654E1)[&rate=4.428984345879206E-4]:2.156949726723E0,((((33[&rate=7.622309652186227E-4]:5.720639225305E1,13[&rate=5.093953001214512E-4]:5.720639225305E1)[&rate=6.543625047861396E-4]:1.405770218933E1,(11[&rate=3.346610813923465E-4]:1.873049260425E1,29[&rate=8.96479293311033E-4]:1.873049260425E1)[&rate=6.313354932256172E-4]:5.253360183813E1)[&rate=8.733510694823985E-4]:9.320319972522E-1,(19[&rate=5.678193139668634E-4]:1.074360974389E1,18[&rate=8.96479293311033E-4]:1.074360974389E1)[&rate=4.904375394040267E-4]:6.145251669573E1)[&rate=4.3320259746730853E-4]:3.684642593851E0,((10[&rate=7.32202102898508E-4]:1.984221861763E1,31[&rate=4.809830692282908E-4]:1.984221861763E1)[&rate=2.8868900817048687E-4]:5.547107220274E1,23[&rate=4.134126451866991E-4]:7.531329082037E1)[&rate=3.474831174709601E-4]:5.67478213104E-1)[&rate=3.71085178077714E-4]:2.560650249789E0)[&rate=8.31812479136518E-4]:4.901765412373E0,(17[&rate=8.518772196445236E-4]:7.767070573967E1,(27[&rate=5.98699000622471E-4]:2.795417245851E1,28[&rate=0.0010135076987645747]:2.795417245851E1)[&rate=4.715215906884178E-4]:4.971653328115E1)[&rate=4.525006645342239E-4]:5.672478955973E0)[&rate=0.00176174115828845]:4.563233730548E1); +tree STATE_1070000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55129.794636509185,EEF_ucld_branchRates=-266.168517335019,lnP=-55129.794636509185,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.8172473052696E-4]:9.206867550012E0,9[&rate=7.624734298737289E-4]:9.206867550012E0)[&rate=5.217689993200701E-4]:8.67103971363E0,15[&rate=3.4454831077793883E-4]:1.787790726364E1)[&rate=7.269941253380213E-4]:9.858606018488E1,(14[&rate=0.0011575165348884752]:4.668250537025E1,24[&rate=7.624734298737289E-4]:4.668250537025E1)[&rate=7.442713356634284E-4]:6.978146207827E1)[&rate=8.72764102335958E-4]:7.895442781628E0,((((((16[&rate=4.040319474341064E-4]:4.684549211126E1,((22[&rate=5.763266839527458E-4]:4.409766790505E0,21[&rate=3.5484400275438E-4]:4.409766790505E0)[&rate=9.642640201821443E-4]:5.861710206114E0,20[&rate=3.3399735288822303E-4]:1.027147699662E1)[&rate=8.72764102335958E-4]:3.657401511465E1)[&rate=0.0010021307164639853]:2.765211265248E1,(((((4[&rate=5.649595394928279E-4]:3.286029523823E0,2[&rate=6.948117796417444E-4]:3.286029523823E0)[&rate=2.4352053091756937E-4]:2.992787939667E-1,3[&rate=8.240052781732198E-4]:3.58530831779E0)[&rate=4.3279260078539375E-4]:1.019629575887E1,5[&rate=3.649362511780711E-4]:1.378160407666E1)[&rate=5.429515672235606E-4]:3.622703952688E0,((7[&rate=3.5484400275438E-4]:1.00649232558E1,6[&rate=6.121810483599872E-4]:1.00649232558E1)[&rate=2.0019216702859413E-4]:2.038092945586E0,1[&rate=3.649362511780711E-4]:1.210301620139E1)[&rate=3.9438672271803374E-4]:5.301291827958E0)[&rate=4.136338750023068E-4]:5.503125318235E1,((30[&rate=5.322671379926243E-4]:5.120567093934E1,26[&rate=6.948117796417444E-4]:5.120567093934E1)[&rate=3.9438672271803374E-4]:1.224995558155E1,32[&rate=3.8467427909664634E-4]:6.345562652089E1)[&rate=4.040319474341064E-4]:8.979934690808E0)[&rate=4.7144618680923685E-4]:2.06204355205E0)[&rate=8.240052781732198E-4]:2.26786997734E0,12[&rate=5.012578317491164E-4]:7.676547474109E1)[&rate=8.474411144990577E-4]:9.411577515126E-1,25[&rate=5.649595394928279E-4]:7.77066324926E1)[&rate=3.231266552414985E-4]:2.318106061005E0,((((33[&rate=7.624734298737289E-4]:6.398261324415E1,13[&rate=4.6169797533613424E-4]:6.398261324415E1)[&rate=3.649362511780711E-4]:8.405866178292E0,(11[&rate=5.999096235926464E-4]:1.695515390953E1,29[&rate=4.423878106821967E-4]:1.695515390953E1)[&rate=6.948117796417444E-4]:5.543332551291E1)[&rate=5.763266839527458E-4]:8.143193337766E-1,(19[&rate=5.999096235926464E-4]:1.248234748449E1,18[&rate=8.474411144990577E-4]:1.248234748449E1)[&rate=3.9438672271803374E-4]:6.072045127173E1)[&rate=5.429515672235606E-4]:4.027216842862E0,((10[&rate=4.3279260078539375E-4]:1.784895896752E1,31[&rate=0.0010962459524725052]:1.784895896752E1)[&rate=2.7430833061618104E-4]:5.874088640241E1,23[&rate=4.3279260078539375E-4]:7.658984536994E1)[&rate=3.8467427909664634E-4]:6.401702291491E-1)[&rate=3.118537982063007E-4]:2.794722954523E0)[&rate=8.021746985097921E-4]:6.184754844097E0,(17[&rate=6.948117796417444E-4]:7.858839984041E1,(27[&rate=8.021746985097921E-4]:3.182969122478E1,28[&rate=0.0011575165348884752]:3.182969122478E1)[&rate=5.999096235926464E-4]:4.675870861563E1)[&rate=0.0010021307164639853]:7.621093557297E0)[&rate=0.0018681582614768037]:3.814991683245E1); +tree STATE_1080000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55134.03358821694,EEF_ucld_branchRates=-266.168517335019,lnP=-55134.03358821694,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.648877216662546E-4]:9.730094229441E0,9[&rate=6.648877216662546E-4]:9.730094229441E0)[&rate=3.2399515807688415E-4]:7.213033636295E0,15[&rate=8.126820883789653E-4]:1.694312786574E1)[&rate=8.5946212510044E-4]:9.333154554964E1,(14[&rate=0.001386684762868653]:4.53394892539E1,24[&rate=4.918214864417785E-4]:4.53394892539E1)[&rate=0.0012977307029369718]:6.493518416147E1)[&rate=8.126820883789653E-4]:1.700699220446E1,((((((16[&rate=4.8119014068763737E-4]:4.134988658198E1,((22[&rate=0.0018177054310039905]:3.498807537496E0,21[&rate=9.784075448485653E-4]:3.498807537496E0)[&rate=4.2340487563844E-4]:4.335970054043E0,20[&rate=4.703313623957456E-4]:7.834777591539E0)[&rate=9.784075448485653E-4]:3.351510899044E1)[&rate=8.945011870291152E-4]:3.145315014813E1,(((30[&rate=9.784075448485653E-4]:5.127976754542E1,26[&rate=9.336831970547028E-4]:5.127976754542E1)[&rate=7.211237603821982E-4]:1.143398251597E1,32[&rate=5.62790162139294E-4]:6.271375006139E1)[&rate=4.8119014068763737E-4]:7.861595345641E0,((((4[&rate=6.230264118745939E-4]:1.903427509786E0,2[&rate=5.22744558285138E-4]:1.903427509786E0)[&rate=4.5919428086378206E-4]:1.14642399992E0,3[&rate=6.027387047602926E-4]:3.049851509706E0)[&rate=5.62790162139294E-4]:1.177230793286E1,5[&rate=4.5919428086378206E-4]:1.482215944257E1)[&rate=6.542192038069757E-4]:1.938201116751E0,((7[&rate=4.8119014068763737E-4]:9.772486381261E0,6[&rate=0.001133303295923382]:9.772486381261E0)[&rate=9.784075448485653E-4]:1.841051414913E0,1[&rate=5.125651198728016E-4]:1.161353779617E1)[&rate=5.022678063073513E-4]:5.146822763146E0)[&rate=6.230264118745939E-4]:5.381498484771E1)[&rate=6.979659442351829E-4]:2.227691323075E0)[&rate=9.135004495205615E-4]:1.448110545211E0,12[&rate=8.5946212510044E-4]:7.425114727532E1)[&rate=8.126820883789653E-4]:8.044697265348E-1,25[&rate=5.022678063073513E-4]:7.505561700185E1)[&rate=5.022678063073513E-4]:2.384628987007E0,((((33[&rate=0.0010611100032114189]:6.458626409078E1,13[&rate=5.328334720346972E-4]:6.458626409078E1)[&rate=5.62790162139294E-4]:7.103846327643E0,(11[&rate=5.528350573649289E-4]:1.414530852193E1,29[&rate=9.552396137478997E-4]:1.414530852193E1)[&rate=5.827040603395944E-4]:5.754480189649E1)[&rate=8.765308670631525E-4]:1.280297453429E0,(19[&rate=0.0010949025457037873]:1.242306943274E1,18[&rate=7.211237603821982E-4]:1.242306943274E1)[&rate=4.358202773236408E-4]:6.054733843911E1)[&rate=8.945011870291152E-4]:2.063718917234E0,((10[&rate=8.126820883789653E-4]:1.602745742643E1,31[&rate=6.867409980233372E-4]:1.602745742643E1)[&rate=3.2399515807688415E-4]:5.895411607544E1,23[&rate=5.22744558285138E-4]:7.498157350187E1)[&rate=5.125651198728016E-4]:5.255328721036E-2)[&rate=7.211237603821982E-4]:2.40611919978E0)[&rate=6.867409980233372E-4]:2.934243142827E0,(17[&rate=8.431886743766339E-4]:6.882098869099E1,(27[&rate=3.462036830381257E-4]:2.738073846069E1,28[&rate=0.0011778874124643809]:2.738073846069E1)[&rate=6.867409980233372E-4]:4.144025023029E1)[&rate=7.331066861544526E-4]:1.15535004407E1)[&rate=9.135004495205615E-4]:4.690717648815E1); +tree STATE_1090000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.84853873062,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.84853873062,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.208453414419401E-4]:8.805020679128E0,9[&rate=6.608063379082266E-4]:8.805020679128E0)[&rate=4.6022622597981005E-4]:7.896216628115E0,15[&rate=5.302993935119918E-4]:1.670123730724E1)[&rate=9.014763754775282E-4]:9.001330626193E1,(14[&rate=0.0014096049586761821]:4.222758282096E1,24[&rate=0.0011149513324931566]:4.222758282096E1)[&rate=9.629377406187616E-4]:6.448696074821E1)[&rate=9.4089720753323E-4]:1.960163810223E1,((((((16[&rate=3.6376465277983305E-4]:4.187101873818E1,((22[&rate=0.0012944564794138318]:2.998705012015E0,21[&rate=6.806462754774087E-4]:2.998705012015E0)[&rate=4.814459783138822E-4]:5.204576512968E0,20[&rate=8.508652510774143E-4]:8.203281524983E0)[&rate=0.0010762842076049097]:3.36677372132E1)[&rate=9.014763754775282E-4]:2.670515886383E1,(((30[&rate=8.073296510742574E-4]:4.631897029614E1,26[&rate=7.225644832190805E-4]:4.631897029614E1)[&rate=9.4089720753323E-4]:9.66890708888E0,32[&rate=4.7100703314909817E-4]:5.598787738502E1)[&rate=3.4235929076516973E-4]:1.097685221517E1,((((4[&rate=8.668083263733282E-4]:2.391506755923E0,2[&rate=6.040717223535721E-4]:2.391506755923E0)[&rate=4.814459783138822E-4]:2.365280517723E-1,3[&rate=8.356962267739732E-4]:2.628034807695E0)[&rate=5.673421657735794E-4]:1.118510391894E1,5[&rate=4.4902728092780056E-4]:1.381313872664E1)[&rate=8.212100490524422E-4]:2.01947995506E0,((7[&rate=7.939892450285796E-4]:9.117680739874E0,6[&rate=9.4089720753323E-4]:9.117680739874E0)[&rate=5.856782742316435E-4]:3.877072528605E-1,1[&rate=5.948600720656455E-4]:9.505387992735E0)[&rate=5.015299295060334E-4]:6.327230688962E0)[&rate=6.415154945250626E-4]:5.113211091849E1)[&rate=5.015299295060334E-4]:1.611448001827E0)[&rate=5.396538957722829E-4]:2.778252409991E0,12[&rate=8.356962267739732E-4]:7.1354430012E1)[&rate=7.225644832190805E-4]:1.628992809647E0,25[&rate=7.225644832190805E-4]:7.298342282165E1)[&rate=5.948600720656455E-4]:2.523159598324E0,((((33[&rate=7.117532249660856E-4]:5.734930938824E1,13[&rate=4.916037893768911E-4]:5.734930938824E1)[&rate=4.2494913693788333E-4]:1.305991730652E1,(11[&rate=6.806462754774087E-4]:1.782092440049E1,29[&rate=8.668083263733282E-4]:1.782092440049E1)[&rate=6.90816053549248E-4]:5.258830229427E1)[&rate=5.208453414419401E-4]:2.176340139432E0,(19[&rate=0.0010428758731266183]:1.442121030615E1,18[&rate=5.112655113416944E-4]:1.442121030615E1)[&rate=5.015299295060334E-4]:5.816435652804E1)[&rate=5.673421657735794E-4]:1.941325014484E0,((10[&rate=6.806462754774087E-4]:1.605169914962E1,31[&rate=8.668083263733282E-4]:1.605169914962E1)[&rate=2.6727468137656527E-4]:5.789858055704E1,23[&rate=5.208453414419401E-4]:7.395027970666E1)[&rate=7.939892450285796E-4]:5.766121420252E-1)[&rate=5.489321513570119E-4]:9.796905712945E-1)[&rate=0.0010133939952830955]:4.213178245369E0,(17[&rate=8.836346071210225E-4]:6.731364253985E1,(27[&rate=6.226444597277582E-4]:2.806117540153E1,28[&rate=6.608063379082266E-4]:2.806117540153E1)[&rate=5.015299295060334E-4]:3.925246713833E1)[&rate=8.073296510742574E-4]:1.240611812549E1)[&rate=0.0016581039398719311]:4.659642100606E1); +tree STATE_1100000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55156.471880961115,EEF_ucld_branchRates=-266.168517335019,lnP=-55156.471880961115,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.115966459677469E-4]:7.919928361398E0,9[&rate=7.750135864548432E-4]:7.919928361398E0)[&rate=5.116976264559713E-4]:7.477081500854E0,15[&rate=5.359947425860787E-4]:1.539700986225E1)[&rate=6.48465617926052E-4]:1.076893672163E2,(14[&rate=0.0011478768146674489]:4.88177599691E1,24[&rate=9.031718695968001E-4]:4.88177599691E1)[&rate=0.0012477995821671666]:7.426861710944E1)[&rate=6.115966459677469E-4]:5.623426361262E0,((((((16[&rate=5.359947425860787E-4]:3.957711671071E1,((22[&rate=4.534875894111991E-4]:2.796944366718E0,21[&rate=6.389609347369884E-4]:2.796944366718E0)[&rate=4.534875894111991E-4]:4.503599710994E0,20[&rate=5.522883174119177E-4]:7.300544077713E0)[&rate=9.917353212156774E-4]:3.2276572633E1)[&rate=6.115966459677469E-4]:3.22716257552E1,(((30[&rate=8.398400570452972E-4]:4.714129222848E1,26[&rate=6.027969225334676E-4]:4.714129222848E1)[&rate=4.3569321244695143E-4]:1.36796898511E1,32[&rate=4.7058722444453594E-4]:6.082098207958E1)[&rate=6.999055037724992E-4]:9.118308094695E0,((((4[&rate=7.228887229785804E-4]:2.504892644258E0,3[&rate=4.534875894111991E-4]:2.504892644258E0)[&rate=7.610491029513054E-4]:2.954603501312E-1,2[&rate=8.398400570452972E-4]:2.800352994389E0)[&rate=5.522883174119177E-4]:1.115075771391E1,5[&rate=3.3109662395464367E-4]:1.39511107083E1)[&rate=7.897459453937028E-4]:1.539934807728E0,((7[&rate=5.278902350934355E-4]:9.573596511907E0,6[&rate=9.031718695968001E-4]:9.573596511907E0)[&rate=4.069377604194916E-4]:3.717351693009E-1,1[&rate=4.621080085345395E-4]:9.945331681207E0)[&rate=6.48465617926052E-4]:5.54571383482E0)[&rate=6.115966459677469E-4]:5.444824465825E1)[&rate=7.750135864548432E-4]:1.909452291641E0)[&rate=7.477576173772079E-4]:2.600521616616E0,12[&rate=4.954289279104864E-4]:7.444926408253E1)[&rate=7.350598323029043E-4]:1.807527199089E0,25[&rate=9.288996687430473E-4]:7.625679128162E1)[&rate=4.534875894111991E-4]:2.00070909133E0,((((11[&rate=4.7895197146911075E-4]:1.969868253422E1,29[&rate=7.228887229785804E-4]:1.969868253422E1)[&rate=5.197959007965048E-4]:4.936379080404E1,(33[&rate=7.111870569940787E-4]:5.779655956896E1,13[&rate=4.168759205409449E-4]:5.779655956896E1)[&rate=4.168759205409449E-4]:1.12659137693E1)[&rate=4.7058722444453594E-4]:2.179969729533E0,(19[&rate=6.581967192488442E-4]:1.507260395826E1,18[&rate=9.580359127487943E-4]:1.507260395826E1)[&rate=3.855529257626719E-4]:5.616983910953E1)[&rate=2.870172342916196E-4]:4.123004347787E0,((10[&rate=5.771372475646459E-4]:1.949649280237E1,31[&rate=8.591045137822556E-4]:1.949649280237E1)[&rate=2.870172342916196E-4]:5.495970129417E1,23[&rate=6.027969225334676E-4]:7.445619409654E1)[&rate=4.8722562339153364E-4]:9.092533190387E-1)[&rate=8.053611281432012E-4]:2.892052957371E0)[&rate=7.477576173772079E-4]:3.4717268601E0,(17[&rate=7.610491029513054E-4]:6.625221545893E1,(27[&rate=4.534875894111991E-4]:2.541324510083E1,28[&rate=8.053611281432012E-4]:2.541324510083E1)[&rate=4.7895197146911075E-4]:4.083897035809E1)[&rate=4.4469489836139426E-4]:1.547701177412E1)[&rate=0.0010816781540874897]:4.698057620675E1); +tree STATE_1110000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.3752470363,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.3752470363,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.52778970427855E-4]:6.71772245889E0,9[&rate=4.424190874599782E-4]:6.71772245889E0)[&rate=4.1171759254246624E-4]:1.272859167766E1,15[&rate=5.063180499680869E-4]:1.944631413655E1)[&rate=7.075886621723801E-4]:9.993919086305E1,(14[&rate=8.524722169145591E-4]:5.133557109333E1,24[&rate=9.390866118587179E-4]:5.133557109333E1)[&rate=6.908415774465502E-4]:6.804993390627E1)[&rate=5.896220814679888E-4]:9.639957866343E0,((((((16[&rate=3.502006242356142E-4]:3.619328248984E1,((22[&rate=9.077196632478096E-4]:2.773002026316E0,21[&rate=4.7379388491762065E-4]:2.773002026316E0)[&rate=6.300974157969632E-4]:5.196302479321E0,20[&rate=5.523432500741697E-4]:7.969304505637E0)[&rate=0.0011644003633728929]:2.82239779842E1)[&rate=0.0010121564737436764]:3.335862838427E1,(((((4[&rate=6.161945302018636E-4]:2.318290461709E0,3[&rate=3.606237703106146E-4]:2.318290461709E0)[&rate=7.434635860072854E-4]:4.252425436179E-1,2[&rate=2.9495074156152593E-4]:2.743533005327E0)[&rate=5.644652801811244E-4]:1.014875784024E1,5[&rate=3.606237703106146E-4]:1.289229084557E1)[&rate=0.0013261063540181697]:3.208657860953E0,((7[&rate=3.0661597709936934E-4]:1.109632751992E1,6[&rate=7.627841595976633E-4]:1.109632751992E1)[&rate=0.0011056359822729724]:6.615082531269E-1,1[&rate=3.0661597709936934E-4]:1.175783577305E1)[&rate=3.606237703106146E-4]:4.343112933474E0)[&rate=5.644652801811244E-4]:5.2284391939E1,((30[&rate=7.627841595976633E-4]:5.10040949884E1,26[&rate=4.6323142845214365E-4]:5.10040949884E1)[&rate=3.606237703106146E-4]:9.601396471386E0,32[&rate=3.811829285174663E-4]:6.060549145979E1)[&rate=4.0154798180535374E-4]:7.779849185739E0)[&rate=6.300974157969632E-4]:1.166570228586E0)[&rate=8.048083138496528E-4]:2.1801238989E0,12[&rate=8.278331243940449E-4]:7.173203477301E1)[&rate=2.059566932950806E-4]:3.501394306281E0,25[&rate=5.523432500741697E-4]:7.523342907929E1)[&rate=2.059566932950806E-4]:8.907691094599E-1,((((11[&rate=8.278331243940449E-4]:1.92169390943E1,29[&rate=4.6323142845214365E-4]:1.92169390943E1)[&rate=5.644652801811244E-4]:5.075546709951E1,(33[&rate=9.736488793936712E-4]:6.024303474642E1,13[&rate=3.811829285174663E-4]:6.024303474642E1)[&rate=7.250996991978289E-4]:9.729371447386E0)[&rate=3.811829285174663E-4]:1.608166805086E0,(19[&rate=8.048083138496528E-4]:1.341683573405E1,18[&rate=0.0010121564737436764]:1.341683573405E1)[&rate=4.321342435850917E-4]:5.816373726484E1)[&rate=7.831838211330526E-4]:3.415798885978E0,((10[&rate=5.174995152183044E-4]:2.161758393507E1,31[&rate=3.2888601469625254E-4]:2.161758393507E1)[&rate=4.1171759254246624E-4]:5.250951673418E1,23[&rate=4.1171759254246624E-4]:7.412710066925E1)[&rate=3.0661597709936934E-4]:8.692712156194E-1)[&rate=7.627841595976633E-4]:1.127826303879E0)[&rate=0.0016425596747470692]:3.412988799031E0,(17[&rate=9.390866118587179E-4]:6.534577303202E1,(27[&rate=3.502006242356142E-4]:2.728351608548E1,28[&rate=7.250996991978289E-4]:2.728351608548E1)[&rate=5.644652801811244E-4]:3.806225694655E1)[&rate=2.415991429580193E-4]:1.419141395576E1)[&rate=0.001449510077729178]:4.948827587816E1); +tree STATE_1120000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.55528966985,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.55528966985,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.780800078334353E-4]:7.781089722293E0,9[&rate=0.001412976856616016]:7.781089722293E0)[&rate=3.9593023387591425E-4]:1.133137440148E1,15[&rate=3.289762640225695E-4]:1.911246412377E1)[&rate=8.036135002007146E-4]:9.046713929713E1,(14[&rate=9.001460757210527E-4]:4.545808382386E1,24[&rate=0.0011736920301844208]:4.545808382386E1)[&rate=8.036135002007146E-4]:6.412151959704E1)[&rate=8.73604985173127E-4]:1.925612991255E1,((((((16[&rate=3.4058079737728784E-4]:3.355781537548E1,((22[&rate=0.0017578359576524108]:2.630655321945E0,21[&rate=4.1752730132134255E-4]:2.630655321945E0)[&rate=5.408915366978767E-4]:5.812401539432E0,20[&rate=4.391399159600336E-4]:8.443056861377E0)[&rate=9.597147068491323E-4]:2.51147585141E1)[&rate=9.935683386901224E-4]:3.574993106207E1,(((((4[&rate=6.612355518834715E-4]:1.744046922106E0,2[&rate=3.631192857798768E-4]:1.744046922106E0)[&rate=7.443194941612534E-4]:7.063319152204E-1,3[&rate=6.612355518834715E-4]:2.450378837326E0)[&rate=4.1752730132134255E-4]:1.082652601158E1,5[&rate=3.7415125332487863E-4]:1.32769048489E1)[&rate=4.943176439656857E-4]:2.120815738754E0,((7[&rate=2.1124877851028893E-4]:1.106491400035E1,6[&rate=0.0011736920301844208]:1.106491400035E1)[&rate=2.641545557583531E-4]:7.724358022937E-1,1[&rate=4.283205991790264E-4]:1.183734980264E1)[&rate=4.7195437627096075E-4]:3.560370785014E0)[&rate=7.263472338080308E-4]:5.07504031487E1,((30[&rate=4.830748889718986E-4]:4.968334444424E1,26[&rate=4.943176439656857E-4]:4.968334444424E1)[&rate=5.654241552798471E-4]:8.777180936603E0,32[&rate=3.631192857798768E-4]:5.846052538084E1)[&rate=3.8507741290037757E-4]:7.687598355519E0)[&rate=5.910291764036318E-4]:3.159622701188E0)[&rate=0.001072519435700982]:2.29913800601E0,12[&rate=8.255504938676307E-4]:7.160688444356E1)[&rate=3.0475941902139694E-4]:1.071634719382E0,25[&rate=7.631208976170879E-4]:7.267851916294E1)[&rate=1.8594476844694283E-4]:1.05782877769E0,((((11[&rate=3.170639592036967E-4]:1.720716435335E1,29[&rate=5.910291764036318E-4]:1.720716435335E1)[&rate=9.597147068491323E-4]:4.982055700721E1,(33[&rate=8.036135002007146E-4]:6.026800656157E1,13[&rate=5.289683263825607E-4]:6.026800656157E1)[&rate=3.7415125332487863E-4]:6.759714799E0)[&rate=3.631192857798768E-4]:1.210390887539E0,(19[&rate=8.255504938676307E-4]:1.593666045098E1,18[&rate=7.828479696512711E-4]:1.593666045098E1)[&rate=4.391399159600336E-4]:5.230145179712E1)[&rate=5.910291764036318E-4]:3.009874216104E0,((10[&rate=6.612355518834715E-4]:2.578962616527E1,31[&rate=7.631208976170879E-4]:2.578962616527E1)[&rate=6.179205517817627E-4]:4.516866419892E1,23[&rate=4.1752730132134255E-4]:7.095829036418E1)[&rate=4.7195437627096075E-4]:2.896961000233E-1)[&rate=6.042993427274873E-4]:2.48836147642E0)[&rate=0.0011736920301844208]:3.036300308438E0,(17[&rate=0.001030897365106695]:6.748586402687E1,(27[&rate=3.170639592036967E-4]:2.834966567703E1,28[&rate=7.828479696512711E-4]:2.834966567703E1)[&rate=8.488173784369659E-4]:3.913619834984E1)[&rate=3.7415125332487863E-4]:9.286784222193E0)[&rate=0.001547277112882656]:5.206308508438E1); +tree STATE_1130000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55133.928835337036,EEF_ucld_branchRates=-266.168517335019,lnP=-55133.928835337036,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.031560140059146E-4]:6.505818671482E0,9[&rate=0.001239038262532476]:6.505818671482E0)[&rate=5.71057443915998E-4]:9.567627223999E0,15[&rate=5.471336653016367E-4]:1.607344589548E1)[&rate=9.703622500924103E-4]:9.315091060872E1,(14[&rate=0.001125356121527823]:4.40210258119E1,24[&rate=4.6833967209726425E-4]:4.40210258119E1)[&rate=0.001039492760536983]:6.520333069231E1)[&rate=0.0014077206095905095]:1.999951241596E1,((((((16[&rate=4.4661195828691783E-4]:3.088097334835E1,((22[&rate=0.0015361896116283494]:2.895448087877E0,21[&rate=4.902908115261922E-4]:2.895448087877E0)[&rate=8.395196772162355E-4]:6.45853800669E0,20[&rate=3.582450154653724E-4]:9.353986094567E0)[&rate=9.703622500924103E-4]:2.152698725379E1)[&rate=9.703622500924103E-4]:3.953625749916E1,(((((4[&rate=3.8101967377796335E-4]:1.932742055134E0,2[&rate=6.218841462865998E-4]:1.932742055134E0)[&rate=5.239662616048965E-4]:8.908584124578E-1,3[&rate=2.262920128218332E-4]:2.823600467591E0)[&rate=7.599117400220138E-4]:9.143526619177E0,5[&rate=3.2192801373764733E-4]:1.196712708677E1)[&rate=2.646713600169429E-4]:3.714100868994E0,((7[&rate=4.357819261570697E-4]:1.026638321297E1,6[&rate=3.4649666471765333E-4]:1.026638321297E1)[&rate=7.977096304954903E-4]:1.303278430244E0,1[&rate=3.921473751746849E-4]:1.156966164322E1)[&rate=3.3442026004278417E-4]:4.111566312545E0)[&rate=6.933169212198266E-4]:5.315201464014E1,((30[&rate=5.959096270843827E-4]:5.22336379023E1,26[&rate=6.218841462865998E-4]:5.22336379023E1)[&rate=7.253152566876658E-4]:1.096041247467E1,32[&rate=3.921473751746849E-4]:6.319405037698E1)[&rate=6.781432051434982E-4]:5.639192218922E0)[&rate=6.634538609921072E-4]:1.583988251614E0)[&rate=0.002194240689533166]:2.5879719786E0,12[&rate=8.622652948599426E-4]:7.300520282612E1)[&rate=8.395196772162355E-4]:6.575384329942E-1,25[&rate=8.864714168659573E-4]:7.366274125911E1)[&rate=6.492060141041475E-4]:1.482345498202E0,(((19[&rate=8.180517493351567E-4]:1.873565426806E1,18[&rate=4.031560140059146E-4]:1.873565426806E1)[&rate=3.8101967377796335E-4]:5.363480540426E1,((11[&rate=4.5745765064940136E-4]:2.109748011497E1,29[&rate=4.140789653008104E-4]:2.109748011497E1)[&rate=6.087433812394271E-4]:4.874910233569E1,(33[&rate=7.599117400220138E-4]:6.091854468882E1,13[&rate=3.582450154653724E-4]:6.091854468882E1)[&rate=4.140789653008104E-4]:8.92803776184E0)[&rate=9.703622500924103E-4]:2.523877221657E0)[&rate=4.792777155672929E-4]:1.405194436919E0,((10[&rate=5.013975984889435E-4]:2.719239025302E1,31[&rate=8.180517493351567E-4]:2.719239025302E1)[&rate=2.262920128218332E-4]:4.562186448071E1,23[&rate=5.589906759436227E-4]:7.281425473373E1)[&rate=7.977096304954903E-4]:9.613993755061E-1)[&rate=6.087433812394271E-4]:1.369432648075E0)[&rate=3.8101967377796335E-4]:6.108445943956E0,(17[&rate=0.0011776341883834752]:6.851241453326E1,(27[&rate=4.4661195828691783E-4]:3.341560483397E1,28[&rate=9.123608653708172E-4]:3.341560483397E1)[&rate=7.783657218332745E-4]:3.509680969929E1)[&rate=5.126165633670391E-4]:1.274111816801E1)[&rate=8.180517493351567E-4]:4.797033621889E1); +tree STATE_1140000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55137.74345178821,EEF_ucld_branchRates=-266.168517335019,lnP=-55137.74345178821,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.5230902076273726E-4]:6.469736360809E0,9[&rate=4.904273912809993E-4]:6.469736360809E0)[&rate=4.667351625803266E-4]:6.444479736044E0,15[&rate=7.099968038392849E-4]:1.291421609685E1)[&rate=7.360268982599198E-4]:9.583936987561E1,(14[&rate=0.0015469654452583078]:4.523143656285E1,24[&rate=0.0010510557472218404]:4.523143656285E1)[&rate=8.556594438558062E-4]:6.352214940962E1)[&rate=0.001080958839559592]:1.956524666189E1,((((((16[&rate=4.545025606733161E-4]:3.267699705692E1,((22[&rate=5.918172585165557E-4]:3.329326877647E0,21[&rate=0.001190612842078402]:3.329326877647E0)[&rate=9.104128694973533E-4]:6.044135932268E0,20[&rate=9.516370418662035E-4]:9.373462809915E0)[&rate=0.0012369780198693116]:2.330353424701E1)[&rate=9.740637187391942E-4]:3.666116124415E1,(((((4[&rate=7.775065341576183E-4]:2.255899139796E0,2[&rate=7.360268982599198E-4]:2.255899139796E0)[&rate=6.25834760969199E-4]:4.493562446595E-1,3[&rate=9.104128694973533E-4]:2.705255384455E0)[&rate=5.806128084024291E-4]:9.993532919495E0,5[&rate=5.134032698612567E-4]:1.269878830395E1)[&rate=5.359502181636123E-4]:1.640601786804E0,((7[&rate=6.97382164670309E-4]:9.141602815812E0,6[&rate=7.921174283149151E-4]:9.141602815812E0)[&rate=0.001080958839559592]:1.341020052006E0,1[&rate=6.144096641455233E-4]:1.048262286782E1)[&rate=5.582916567484696E-4]:3.856767222936E0)[&rate=5.247152632920035E-4]:5.198677484215E1,((30[&rate=8.731082357081894E-4]:4.843107282513E1,26[&rate=6.490354220098556E-4]:4.843107282513E1)[&rate=8.913281725298224E-4]:1.265766624559E1,32[&rate=4.2893449180937015E-4]:6.108873907072E1)[&rate=5.918172585165557E-4]:5.237425862192E0)[&rate=9.516370418662035E-4]:3.011993368167E0)[&rate=0.002088103086922794]:1.950791553851E0,12[&rate=9.304723139995368E-4]:7.128894985492E1)[&rate=4.154134488845828E-4]:2.087806461602E0,25[&rate=7.228695666286153E-4]:7.337675631653E1)[&rate=7.775065341576183E-4]:1.601100669661E0,(((19[&rate=0.0012910224682573194]:1.529850324931E1,18[&rate=0.0010510557472218404]:1.529850324931E1)[&rate=4.667351625803266E-4]:5.509609410586E1,((11[&rate=3.088029729345156E-4]:2.167678246287E1,29[&rate=5.019850084712192E-4]:2.167678246287E1)[&rate=9.104128694973533E-4]:4.810505628363E1,(33[&rate=9.979427359693802E-4]:5.649939717934E1,13[&rate=5.019850084712192E-4]:5.649939717934E1)[&rate=2.7851074827370546E-4]:1.328244156716E1)[&rate=7.633125519952428E-4]:6.127586086663E-1)[&rate=5.471343746233906E-4]:2.502147612223E0,((10[&rate=8.913281725298224E-4]:2.830577623444E1,31[&rate=5.134032698612567E-4]:2.830577623444E1)[&rate=4.904273912809993E-4]:4.244762811443E1,23[&rate=6.030766543528369E-4]:7.075340434887E1)[&rate=4.667351625803266E-4]:2.143340618517E0)[&rate=4.4192943435048963E-4]:2.081112018797E0)[&rate=6.728305337989467E-4]:5.172403533566E0,(17[&rate=0.0010510557472218404]:6.809869764044E1,(27[&rate=6.728305337989467E-4]:2.866403493301E1,28[&rate=8.913281725298224E-4]:2.866403493301E1)[&rate=8.22764364839206E-4]:3.943466270743E1)[&rate=4.7869232502473934E-4]:1.205156287931E1)[&rate=0.0017152211592683896]:4.81685721146E1); +tree STATE_1150000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55132.15583397838,EEF_ucld_branchRates=-266.168517335019,lnP=-55132.15583397838,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.8313811765572885E-4]:8.277732993737E0,9[&rate=7.022186034213433E-4]:8.277732993737E0)[&rate=4.632190846050816E-4]:6.165380664359E0,15[&rate=2.7993266891059666E-4]:1.44431136581E1)[&rate=8.007630689825537E-4]:9.721787666827E1,(14[&rate=0.0015874933155215184]:4.800161853749E1,24[&rate=8.961528153641692E-4]:4.800161853749E1)[&rate=0.0012148068938390194]:6.365937178888E1)[&rate=7.736384740666215E-4]:1.46465652461E1,((((((16[&rate=3.619052861810251E-4]:3.512091812871E1,((22[&rate=0.0011403325167684728]:4.214354375103E0,21[&rate=3.104784903190988E-4]:4.214354375103E0)[&rate=7.245764595646921E-4]:4.846982992789E0,20[&rate=2.901446886738343E-4]:9.061337367891E0)[&rate=8.961528153641692E-4]:2.605958076082E1)[&rate=9.762991838851309E-4]:3.985325563233E1,(((((4[&rate=3.2065235943633816E-4]:1.942604578454E0,2[&rate=2.7993266891059666E-4]:1.942604578454E0)[&rate=3.8313811765572885E-4]:7.687820043067E-1,3[&rate=5.015707665618452E-4]:2.71138658276E0)[&rate=5.582830547028909E-4]:1.194757461403E1,5[&rate=9.39029441073894E-5]:1.465896119679E1)[&rate=8.961528153641692E-4]:2.421228665418E0,((7[&rate=1.9125438991971609E-4]:1.051565087058E1,6[&rate=3.5146861296180107E-4]:1.051565087058E1)[&rate=2.2696360365283112E-4]:9.240164393847E-1,1[&rate=2.7993266891059666E-4]:1.143966730997E1)[&rate=8.299751231452357E-4]:5.640522552243E0)[&rate=7.245764595646921E-4]:5.521064003382E1,((30[&rate=7.022186034213433E-4]:5.013459796504E1,26[&rate=5.89731479018194E-4]:5.013459796504E1)[&rate=3.8313811765572885E-4]:1.204047681947E1,32[&rate=3.003174727468885E-4]:6.217507478451E1)[&rate=5.582830547028909E-4]:1.011575511153E1)[&rate=2.5926063877513173E-4]:2.683343864997E0)[&rate=0.002474226485228632]:7.004106093832E-1,12[&rate=5.737098845902199E-4]:7.567458437042E1)[&rate=4.884431399494666E-4]:2.034503309412E0,25[&rate=8.007630689825537E-4]:7.770908767983E1)[&rate=4.161637173012407E-4]:1.989250333003E0,(((19[&rate=8.961528153641692E-4]:1.61033702242E1,18[&rate=7.736384740666215E-4]:1.61033702242E1)[&rate=2.6965012724017393E-4]:5.909518430665E1,((11[&rate=3.104784903190988E-4]:2.348853455633E1,29[&rate=2.4872077802977116E-4]:2.348853455633E1)[&rate=6.237981510512977E-4]:4.983854383572E1,(33[&rate=7.483196375783033E-4]:6.310234342154E1,13[&rate=3.4112705576945984E-4]:6.310234342154E1)[&rate=5.290132196505338E-4]:1.02247349705E1)[&rate=7.245764595646921E-4]:1.871476138806E0)[&rate=3.003174727468885E-4]:1.094568854001E0,((10[&rate=4.5106759416288164E-4]:2.398080343172E1,31[&rate=5.015707665618452E-4]:2.398080343172E1)[&rate=4.161637173012407E-4]:5.034813652561E1,23[&rate=5.290132196505338E-4]:7.432893995733E1)[&rate=2.5926063877513173E-4]:1.964183427519E0)[&rate=4.5106759416288164E-4]:3.405214627984E0)[&rate=3.104784903190988E-4]:1.684941139151E0,(17[&rate=6.610466561823494E-4]:6.939391899879E1,(27[&rate=1.463547273426599E-4]:3.01977060807E1,28[&rate=6.419833039831087E-4]:3.01977060807E1)[&rate=0.0011403325167684728]:3.919621291809E1)[&rate=2.2696360365283112E-4]:1.19893601532E1)[&rate=0.0015874933155215184]:4.492427642049E1); +tree STATE_1160000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55125.764568051585,EEF_ucld_branchRates=-266.168517335019,lnP=-55125.764568051585,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.631786091322731E-4]:6.920200983172E0,9[&rate=8.121091018909791E-4]:6.920200983172E0)[&rate=5.193387152105766E-4]:6.676573743337E0,15[&rate=8.471085831108848E-4]:1.359677472651E1)[&rate=7.112465279020951E-4]:9.445137048908E1,(14[&rate=0.0013458100727462344]:4.664393211611E1,24[&rate=6.408135168490522E-4]:4.664393211611E1)[&rate=8.471085831108848E-4]:6.140421309948E1)[&rate=8.86337130987786E-4]:2.047653793863E1,((((((((30[&rate=8.66118664440226E-4]:5.125091656735E1,26[&rate=6.631786091322731E-4]:5.125091656735E1)[&rate=7.958809590249262E-4]:1.017578777441E1,32[&rate=4.1894762304937373E-4]:6.142670434175E1)[&rate=3.8454599891890595E-4]:1.00779190291E1,((((4[&rate=4.296840503419742E-4]:1.815804121258E0,2[&rate=0.0010875554754827684]:1.815804121258E0)[&rate=6.865824303874131E-4]:5.762690953907E-1,3[&rate=4.296840503419742E-4]:2.392073216649E0)[&rate=4.705251634520583E-4]:8.255415862011E0,5[&rate=7.112465279020951E-4]:1.064748907866E1)[&rate=4.803977319710123E-4]:4.742837698568E0,((7[&rate=2.1782718967373112E-4]:9.32107880643E0,6[&rate=8.291487915315137E-4]:9.32107880643E0)[&rate=4.401658883755128E-4]:1.630087477749E0,1[&rate=3.9646222797532795E-4]:1.095116628418E1)[&rate=0.0010875554754827684]:4.439160493049E0)[&rate=6.299611500458281E-4]:5.611429659363E1)[&rate=5.682280137015787E-4]:1.010470357965E0,(16[&rate=4.5044101539318206E-4]:3.699375688064E1,((22[&rate=9.312270775563368E-4]:2.389666865276E0,21[&rate=5.096432895083595E-4]:2.389666865276E0)[&rate=6.408135168490522E-4]:7.811044456224E0,20[&rate=5.387617993221473E-4]:1.02007113215E1)[&rate=0.0017910315569227145]:2.679304555914E1)[&rate=9.840417147777328E-4]:3.552133684818E1)[&rate=9.312270775563368E-4]:2.620428470634E0,12[&rate=8.121091018909791E-4]:7.513552219945E1)[&rate=4.6054942476054947E-4]:3.900831474104E-1,25[&rate=7.958809590249262E-4]:7.552560534686E1)[&rate=9.312270775563368E-4]:1.478704686743E0,(((33[&rate=7.512156502779765E-4]:6.222807729106E1,13[&rate=4.401658883755128E-4]:6.222807729106E1)[&rate=8.66118664440226E-4]:9.857434468389E0,((11[&rate=4.6054942476054947E-4]:1.825894682464E1,29[&rate=5.290391152241598E-4]:1.825894682464E1)[&rate=5.387617993221473E-4]:5.175404175795E1,(19[&rate=4.999345917326469E-4]:1.566212390705E1,18[&rate=7.958809590249262E-4]:1.566212390705E1)[&rate=3.5872686907144677E-4]:5.435086467554E1)[&rate=5.984785995064692E-4]:2.072523176859E0)[&rate=4.0789808553488334E-4]:1.407005176133E0,((10[&rate=6.865824303874131E-4]:2.431815037946E1,31[&rate=5.984785995064692E-4]:2.431815037946E1)[&rate=2.898888770131878E-4]:4.750450399692E1,23[&rate=6.193006832771525E-4]:7.182265437638E1)[&rate=4.901931202618751E-4]:1.669862559198E0)[&rate=3.4440473537329023E-4]:3.511793098025E0)[&rate=7.112465279020951E-4]:3.562069751172E0,(17[&rate=9.079586974451197E-4]:6.996098358628E1,(27[&rate=5.782029314337533E-4]:3.054810781442E1,28[&rate=0.0010875554754827684]:3.054810781442E1)[&rate=7.65506735186872E-4]:3.941287577186E1)[&rate=4.803977319710123E-4]:1.06053961985E1)[&rate=0.0013458100727462344]:4.795830336944E1); +tree STATE_1170000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55131.00331870173,EEF_ucld_branchRates=-266.168517335019,lnP=-55131.00331870173,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.542552018188383E-4]:7.278409787561E0,9[&rate=6.564510141123168E-4]:7.278409787561E0)[&rate=5.277660281470275E-4]:6.319540216539E0,15[&rate=7.940309510950135E-4]:1.35979500041E1)[&rate=9.242081858901678E-4]:8.764980100548E1,(14[&rate=7.940309510950135E-4]:4.55657507427E1,24[&rate=0.001014004263361372]:4.55657507427E1)[&rate=0.001629098116962156]:5.568200026689E1)[&rate=0.001137871874497968]:2.464489842708E1,((((((((30[&rate=6.435093226010557E-4]:5.026911800518E1,26[&rate=5.170879886926286E-4]:5.026911800518E1)[&rate=3.6756005998326386E-4]:1.373586706862E1,32[&rate=4.43811476278961E-4]:6.400498507379E1)[&rate=4.6467301534505685E-4]:9.145052445648E0,((((4[&rate=4.227493404543816E-4]:1.906355937245E0,2[&rate=9.515531126474297E-4]:1.906355937245E0)[&rate=9.515531126474297E-4]:5.953817341287E-1,3[&rate=5.064987423281247E-4]:2.501737671374E0)[&rate=6.975460614585562E-4]:1.057478317321E1,5[&rate=3.790568126423792E-4]:1.307652084458E1)[&rate=6.975460614585562E-4]:2.536162627894E0,((7[&rate=6.697473678898233E-4]:9.452777994389E0,6[&rate=9.813163322383094E-4]:9.452777994389E0)[&rate=4.542552018188383E-4]:1.786118343869E0,1[&rate=7.762290428511893E-4]:1.123889633826E1)[&rate=3.4341993728585334E-4]:4.373787134219E0)[&rate=3.790568126423792E-4]:5.753735404696E1)[&rate=7.592146328146416E-4]:1.944266221239E0,(16[&rate=4.120754016238206E-4]:3.840261506186E1,((22[&rate=0.0013417903287754416]:2.595260197706E0,21[&rate=3.902721220681051E-4]:2.595260197706E0)[&rate=4.120754016238206E-4]:9.045093356644E0,20[&rate=1.784003484515904E-4]:1.164035355435E1)[&rate=8.323967550210683E-4]:2.676226150751E1)[&rate=0.0014545161971881073]:3.669168867882E1)[&rate=0.0010911334569830924]:2.681450063639E0,12[&rate=8.753075008086558E-4]:7.777575380432E1)[&rate=6.185671840875535E-4]:1.039461350979E0,25[&rate=6.185671840875535E-4]:7.88152151553E1)[&rate=4.43811476278961E-4]:1.773191416267E0,(((19[&rate=7.940309510950135E-4]:1.536683910295E1,18[&rate=6.834329432048742E-4]:1.536683910295E1)[&rate=4.43811476278961E-4]:6.055722619273E1,((11[&rate=3.0245045082288494E-4]:2.318822072449E1,29[&rate=4.012627500593491E-4]:2.318822072449E1)[&rate=7.272312575634321E-4]:5.160152751478E1,(33[&rate=8.988940286301705E-4]:6.189808015986E1,13[&rate=4.8551612340910413E-4]:6.189808015986E1)[&rate=5.831099664171907E-4]:1.289166807941E1)[&rate=3.0245045082288494E-4]:1.13431705641E0)[&rate=6.065117524093762E-4]:1.22548121081E0,((10[&rate=6.564510141123168E-4]:2.302496817176E1,31[&rate=8.753075008086558E-4]:2.302496817176E1)[&rate=5.494586529473409E-4]:5.141372536616E1,23[&rate=5.717195692932298E-4]:7.443869353792E1)[&rate=5.064987423281247E-4]:2.710852968573E0)[&rate=3.557112163852169E-4]:3.438860065072E0)[&rate=8.532069844328745E-4]:1.598328086157E0,(17[&rate=8.323967550210683E-4]:7.399556651321E1,(27[&rate=4.012627500593491E-4]:2.863542246202E1,28[&rate=8.753075008086558E-4]:2.863542246202E1)[&rate=5.831099664171907E-4]:4.53601440512E1)[&rate=2.479812123353225E-4]:8.191168144505E0)[&rate=0.001137871874497968]:4.370591477895E1); +tree STATE_1180000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55118.2783224794,EEF_ucld_branchRates=-266.168517335019,lnP=-55118.2783224794,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=1.7887391082005278E-4]:8.894243833409E0,9[&rate=3.4837076289372695E-4]:8.894243833409E0)[&rate=6.128257673930045E-4]:4.799735013251E0,15[&rate=4.1540512216032096E-4]:1.369397884666E1)[&rate=8.551627832274456E-4]:9.571632075781E1,(14[&rate=9.155292660897223E-4]:5.023349618194E1,24[&rate=6.711449945111372E-4]:5.023349618194E1)[&rate=0.0013483309723881017]:5.917680342253E1)[&rate=0.001236526289319526]:1.887444246372E1,((((((((30[&rate=8.28820550945165E-4]:4.982597445431E1,26[&rate=7.042254624015223E-4]:4.982597445431E1)[&rate=5.995308920710815E-4]:1.584354434843E1,32[&rate=2.8648933688249744E-4]:6.566951880274E1)[&rate=4.6428371849377935E-4]:7.197353235788E0,((((4[&rate=3.772396782632615E-4]:2.685175240019E0,3[&rate=3.867734550236479E-4]:2.685175240019E0)[&rate=6.408536413937574E-4]:2.059946192371E-1,2[&rate=6.872975724910793E-4]:2.891169859256E0)[&rate=5.741694238631508E-4]:9.032037852326E0,5[&rate=3.18507447413342E-4]:1.192320771158E1)[&rate=7.408012309525847E-4]:3.583410469484E0,((7[&rate=3.385714050504406E-4]:1.066586892095E1,6[&rate=3.962995449284787E-4]:1.066586892095E1)[&rate=4.950355007833177E-4]:4.817958449449E-1,1[&rate=5.274322834731593E-4]:1.11476647659E1)[&rate=5.741694238631508E-4]:4.35895341517E0)[&rate=6.872975724910793E-4]:5.736025385746E1)[&rate=7.818558392965744E-4]:1.640339824911E0,(16[&rate=3.18507447413342E-4]:4.174399113425E1,((22[&rate=8.551627832274456E-4]:2.36387176602E0,21[&rate=5.386898306023766E-4]:2.36387176602E0)[&rate=3.772396782632615E-4]:5.97835279043E0,20[&rate=2.2027490847651462E-4]:8.342224556449E0)[&rate=9.904581247344563E-4]:3.34017665778E1)[&rate=0.0013483309723881017]:3.276322072919E1)[&rate=7.220229761159482E-4]:1.820117929893E0,12[&rate=8.044852906821358E-4]:7.632732979333E1)[&rate=3.385714050504406E-4]:2.434210959305E0,25[&rate=6.128257673930045E-4]:7.876154075264E1)[&rate=7.408012309525847E-4]:8.750247137504E-1,(((19[&rate=4.4445865317864247E-4]:1.498498418436E1,18[&rate=7.818558392965744E-4]:1.498498418436E1)[&rate=3.772396782632615E-4]:6.117449335609E1,((11[&rate=3.772396782632615E-4]:2.488673204291E1,29[&rate=3.580628525341048E-4]:2.488673204291E1)[&rate=7.818558392965744E-4]:4.917823398287E1,(33[&rate=7.220229761159482E-4]:6.467262972859E1,13[&rate=3.18507447413342E-4]:6.467262972859E1)[&rate=4.1540512216032096E-4]:9.392336297196E0)[&rate=3.385714050504406E-4]:2.094511514665E0)[&rate=2.4998093766019327E-4]:1.165298357111E0,((10[&rate=5.05626243035042E-4]:2.665944059547E1,31[&rate=3.2863050379005774E-4]:2.665944059547E1)[&rate=3.2863050379005774E-4]:4.830475840187E1,23[&rate=4.4445865317864247E-4]:7.496419899734E1)[&rate=4.25020156889938E-4]:2.360576900214E0)[&rate=2.6289729632575387E-4]:2.311789568829E0)[&rate=5.05626243035042E-4]:6.01815362963E0,(17[&rate=8.28820550945165E-4]:7.313232637642E1,(27[&rate=5.274322834731593E-4]:2.764437834399E1,28[&rate=0.0010360536947902437]:2.764437834399E1)[&rate=5.620317834514158E-4]:4.548794803243E1)[&rate=5.866579084278446E-4]:1.25223927196E1)[&rate=0.001089585941064481]:4.263002297217E1); +tree STATE_1190000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55114.1134672862,EEF_ucld_branchRates=-266.168517335019,lnP=-55114.1134672862,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.955528338933501E-4]:7.927185116134E0,9[&rate=7.519733328436986E-4]:7.927185116134E0)[&rate=6.461522760207562E-4]:5.324892056458E0,15[&rate=4.534125669968609E-4]:1.325207717259E1)[&rate=7.226997959955858E-4]:9.951922298852E1,(14[&rate=9.296971672565506E-4]:5.276327594094E1,24[&rate=7.519733328436986E-4]:5.276327594094E1)[&rate=0.0011090867489392182]:6.000802422017E1)[&rate=3.2046664357955466E-4]:1.454468352348E1,((((((((30[&rate=6.461522760207562E-4]:4.899683065672E1,26[&rate=4.036179538448876E-4]:4.899683065672E1)[&rate=6.826504227016899E-4]:1.009070883512E1,32[&rate=3.9310734751397334E-4]:5.908753949184E1)[&rate=4.7265679824977033E-4]:7.957897172604E0,((((4[&rate=4.036179538448876E-4]:2.390393682452E0,3[&rate=6.015042745334696E-4]:2.390393682452E0)[&rate=0.0013274019851362178]:4.075436473525E-1,2[&rate=6.461522760207562E-4]:2.797937329804E0)[&rate=5.206549297434891E-4]:1.00177100356E1,5[&rate=2.8803752704152603E-4]:1.281564736541E1)[&rate=7.519733328436986E-4]:2.940241705532E0,((7[&rate=3.2046664357955466E-4]:1.261651929139E1,6[&rate=6.123133630041144E-4]:1.261651929139E1)[&rate=9.296971672565506E-4]:1.190256172828E0,1[&rate=4.918021422456336E-4]:1.380677546421E1)[&rate=7.838894061213176E-4]:1.949113606726E0)[&rate=4.138901660049568E-4]:5.128954759351E1)[&rate=1.9875597128735014E-4]:5.079992062908E0,(16[&rate=4.534125669968609E-4]:3.627673341688E1,((22[&rate=5.804630918510973E-4]:3.27427073656E0,21[&rate=0.0010233649336536229]:3.27427073656E0)[&rate=4.138901660049568E-4]:5.223968849567E0,20[&rate=7.838894061213176E-4]:8.498239586126E0)[&rate=8.805983591297407E-4]:2.777849383075E1)[&rate=0.001233954865262643]:3.584869531047E1)[&rate=8.383266320813607E-4]:1.063858719654E0,12[&rate=7.838894061213176E-4]:7.318928744701E1)[&rate=5.908940682870152E-4]:3.195858048509E0,25[&rate=8.805983591297407E-4]:7.638514549552E1)[&rate=6.701396696330817E-4]:1.413544239252E0,(((19[&rate=4.437005080379725E-4]:1.579228560064E1,18[&rate=6.701396696330817E-4]:1.579228560064E1)[&rate=4.036179538448876E-4]:5.460139143919E1,((11[&rate=4.036179538448876E-4]:2.321872483446E1,29[&rate=5.109968510682673E-4]:2.321872483446E1)[&rate=8.010477820789281E-4]:4.650537560823E1,(33[&rate=8.587430605124715E-4]:5.661503412559E1,13[&rate=4.534125669968609E-4]:5.661503412559E1)[&rate=7.370419587114917E-4]:1.310906631711E1)[&rate=3.823022381792754E-4]:6.695765971339E-1)[&rate=4.036179538448876E-4]:4.233423618679E0,((10[&rate=3.595082820994329E-4]:2.700133680796E1,31[&rate=4.7265679824977033E-4]:2.700133680796E1)[&rate=5.401728151149252E-4]:4.676908081088E1,23[&rate=5.109968510682673E-4]:7.377041761884E1)[&rate=8.383266320813607E-4]:8.566830396693E-1)[&rate=9.041431306711395E-4]:3.171589076258E0)[&rate=4.3389580233781934E-4]:2.586570867305E0,(17[&rate=8.805983591297407E-4]:6.852046175974E1,(27[&rate=6.015042745334696E-4]:2.615098140078E1,28[&rate=0.0013274019851362178]:2.615098140078E1)[&rate=5.908940682870152E-4]:4.236948035895E1)[&rate=4.63057138167151E-4]:1.186479884233E1)[&rate=0.0013274019851362178]:4.693072308252E1); +tree STATE_1200000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55151.2316194453,EEF_ucld_branchRates=-266.168517335019,lnP=-55151.2316194453,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.742147848834328E-4]:8.654863131321E0,9[&rate=8.5013931051358E-4]:8.654863131321E0)[&rate=5.984699541978092E-4]:5.769384128024E0,15[&rate=8.982758672057119E-4]:1.442424725935E1)[&rate=7.475394331075611E-4]:1.016904669744E2,(14[&rate=0.001057948865956482]:5.003893055444E1,24[&rate=7.148723294623492E-4]:5.003893055444E1)[&rate=0.0010914071803902125]:6.607578367929E1)[&rate=7.589687005131838E-4]:1.333422040832E1,((((((16[&rate=6.077333902927911E-4]:3.824853306177E1,((22[&rate=8.5013931051358E-4]:3.475810883118E0,21[&rate=8.653747072974152E-4]:3.475810883118E0)[&rate=4.931751131938314E-4]:4.682613635608E0,20[&rate=6.263603465857937E-4]:8.158424518726E0)[&rate=0.0010019127758791918]:3.009010854304E1)[&rate=9.557322875812118E-4]:3.342557761528E1,(((30[&rate=8.216392311822219E-4]:5.043747955561E1,26[&rate=8.216392311822219E-4]:5.043747955561E1)[&rate=9.557322875812118E-4]:8.702286453217E0,32[&rate=2.7581994924565393E-4]:5.913976600883E1)[&rate=4.931751131938314E-4]:9.103499900414E0,((((4[&rate=6.941989923499395E-4]:2.61777197925E0,3[&rate=4.826148781227579E-4]:2.61777197925E0)[&rate=9.352674316875089E-4]:1.824130897635E-1,2[&rate=5.70691071109208E-4]:2.800185069013E0)[&rate=5.70691071109208E-4]:8.118753954586E0,5[&rate=4.2262010895336013E-4]:1.09189390236E1)[&rate=5.33006820744146E-4]:3.863524030798E0,((7[&rate=6.742147848834328E-4]:1.008507947934E1,6[&rate=5.425588674523753E-4]:1.008507947934E1)[&rate=8.982758672057119E-4]:7.566151305941E-1,1[&rate=4.0814453852384015E-4]:1.084169460993E1)[&rate=4.931751131938314E-4]:3.940768444462E0)[&rate=6.841300900405771E-4]:5.346080285485E1)[&rate=7.707164215240392E-4]:3.430844767801E0)[&rate=0.0012334798361799092]:2.904448340772E0,12[&rate=9.778355527353512E-4]:7.457855901782E1)[&rate=6.742147848834328E-4]:1.513856281142E0,25[&rate=6.742147848834328E-4]:7.609241529896E1)[&rate=9.352674316875089E-4]:2.759517330736E0,(((19[&rate=5.520082246139555E-4]:1.703194709096E1,18[&rate=8.5013931051358E-4]:1.703194709096E1)[&rate=4.4850775525976543E-4]:5.42377660148E1,((11[&rate=5.425588674523753E-4]:2.080084256342E1,29[&rate=7.255174759651197E-4]:2.080084256342E1)[&rate=7.707164215240392E-4]:4.921396687879E1,(33[&rate=8.355865020155538E-4]:5.985316931214E1,13[&rate=4.826148781227579E-4]:5.985316931214E1)[&rate=9.161829102212616E-4]:1.016164013007E1)[&rate=5.892193011326042E-4]:1.254903663552E0)[&rate=4.717057180000362E-4]:3.735341445207E0,((10[&rate=7.475394331075611E-4]:2.365895038791E1,31[&rate=3.7394257121987966E-4]:2.365895038791E1)[&rate=5.03448183046328E-4]:4.944906649981E1,23[&rate=5.61378527197779E-4]:7.310801688772E1)[&rate=4.931751131938314E-4]:1.897037663244E0)[&rate=5.03448183046328E-4]:3.84687807873E0)[&rate=4.931751131938314E-4]:1.665128397215E0,(17[&rate=0.0013096016224798184]:6.855316799858E1,(27[&rate=5.425588674523753E-4]:2.679249436E1,28[&rate=0.0013096016224798184]:2.679249436E1)[&rate=8.216392311822219E-4]:4.176067363858E1)[&rate=7.363981835746891E-4]:1.196389302833E1)[&rate=0.0014245698118956808]:4.893187361514E1); +tree STATE_1210000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.820752460815,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.820752460815,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.133019805118262E-4]:8.330568263499E0,9[&rate=8.644694995669905E-4]:8.330568263499E0)[&rate=5.85631982298124E-4]:9.141135615336E0,15[&rate=4.4443856419774686E-4]:1.747170387883E1)[&rate=6.427903054447473E-4]:1.064734688976E2,(14[&rate=0.0015142017808350632]:5.088671067334E1,24[&rate=7.861207884588626E-4]:5.088671067334E1)[&rate=0.0011284587572499578]:7.305846210308E1)[&rate=4.3452614430466275E-4]:2.967235392064E0,((((((((30[&rate=8.040537930525356E-4]:4.839003607981E1,26[&rate=8.229895614847981E-4]:4.839003607981E1)[&rate=5.85631982298124E-4]:7.213727132008E0,32[&rate=4.739041428161422E-4]:5.560376321182E1)[&rate=3.8304010323080386E-4]:1.329241269785E1,((((4[&rate=6.940631534735494E-4]:2.307807245067E0,3[&rate=3.8304010323080386E-4]:2.307807245067E0)[&rate=9.121300656556434E-4]:3.833919919439E-1,2[&rate=3.8304010323080386E-4]:2.691199237011E0)[&rate=4.935270204716802E-4]:9.503723374764E0,5[&rate=2.9428377418232415E-4]:1.219492261177E1)[&rate=4.3452614430466275E-4]:2.106487155056E0,((7[&rate=1.8823485292091878E-4]:8.949334208196E0,6[&rate=6.427903054447473E-4]:8.949334208196E0)[&rate=6.806566266513908E-4]:1.376920905395E0,1[&rate=3.8304010323080386E-4]:1.032625511359E1)[&rate=7.528076368979361E-4]:3.97515465324E0)[&rate=4.935270204716802E-4]:5.459476614284E1)[&rate=3.8304010323080386E-4]:2.316237304932E0,(16[&rate=2.3073701202225346E-4]:3.751558098296E1,((22[&rate=0.0012611068666530745]:2.289352420862E0,21[&rate=4.04158150962714E-4]:2.289352420862E0)[&rate=6.940631534735494E-4]:5.998618876754E0,20[&rate=0.001037752225658682]:8.287971297616E0)[&rate=0.0013607468032528155]:2.922760968534E1)[&rate=7.690720105326406E-4]:3.369683223164E1)[&rate=0.001037752225658682]:2.445053427119E0,12[&rate=7.690720105326406E-4]:7.365746664172E1)[&rate=3.2362058312438845E-4]:2.373653847257E0,25[&rate=6.550564783787897E-4]:7.603112048898E1)[&rate=3.937145768377775E-4]:1.176364104165E0,(((19[&rate=9.121300656556434E-4]:1.442201540411E1,18[&rate=8.430704368143749E-4]:1.442201540411E1)[&rate=4.542908722769456E-4]:5.601778247193E1,((11[&rate=3.937145768377775E-4]:1.697187672363E1,29[&rate=7.223044532959644E-4]:1.697187672363E1)[&rate=8.040537930525356E-4]:5.13606029285E1,(33[&rate=8.229895614847981E-4]:6.146774683055E1,13[&rate=3.937145768377775E-4]:6.146774683055E1)[&rate=6.077624366440952E-4]:6.864732821583E0)[&rate=5.965903589104183E-4]:2.10731822391E0)[&rate=4.542908722769456E-4]:2.629333116707E0,((10[&rate=5.965903589104183E-4]:1.965184086013E1,31[&rate=5.333622459140468E-4]:1.965184086013E1)[&rate=5.85631982298124E-4]:5.140939749139E1,23[&rate=4.04158150962714E-4]:7.106123835152E1)[&rate=3.366722671077844E-4]:2.007892641221E0)[&rate=4.8370516464959145E-4]:4.138353600397E0)[&rate=9.684581094866725E-4]:2.085047884287E0,(17[&rate=6.940631534735494E-4]:6.902731765721E1,(27[&rate=6.550564783787897E-4]:2.974849191564E1,28[&rate=9.121300656556434E-4]:2.974849191564E1)[&rate=4.542908722769456E-4]:3.927882574157E1)[&rate=8.229895614847981E-4]:1.026521482022E1)[&rate=0.0015142017808350632]:4.761987569105E1); +tree STATE_1220000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55137.1072795152,EEF_ucld_branchRates=-266.168517335019,lnP=-55137.1072795152,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.652019589964121E-4]:7.252753782705E0,9[&rate=5.310142203528704E-4]:7.252753782705E0)[&rate=2.7384943609892975E-4]:7.960564916197E0,15[&rate=4.2971539613239105E-4]:1.52133186989E1)[&rate=0.001034653151050146]:1.03934086157E2,(14[&rate=6.275641765280305E-4]:4.911109363017E1,24[&rate=8.157919588043131E-4]:4.911109363017E1)[&rate=6.275641765280305E-4]:7.003631122576E1)[&rate=3.554082274320518E-4]:8.433773412103E0,((((((((30[&rate=6.655274297158355E-4]:4.743679984031E1,26[&rate=3.554082274320518E-4]:4.743679984031E1)[&rate=6.655274297158355E-4]:1.152800932012E1,32[&rate=4.2971539613239105E-4]:5.896480916043E1)[&rate=5.508553751752345E-4]:7.934241365828E0,((((4[&rate=5.023877316599368E-4]:2.193106626413E0,3[&rate=7.572077879037006E-4]:2.193106626413E0)[&rate=4.3868659995752537E-4]:5.682226812028E-1,2[&rate=5.408476251939638E-4]:2.761329307616E0)[&rate=3.652019589964121E-4]:8.869310106472E0,5[&rate=3.1283005527037015E-4]:1.163063941409E1)[&rate=3.554082274320518E-4]:2.212545360008E0,((7[&rate=5.408476251939638E-4]:8.771072474661E0,6[&rate=9.903436348533206E-4]:8.771072474661E0)[&rate=3.652019589964121E-4]:1.492403736547E0,1[&rate=4.026198642470861E-4]:1.026347621121E1)[&rate=3.554082274320518E-4]:3.579708562888E0)[&rate=6.275641765280305E-4]:5.305586575216E1)[&rate=1.7602950350788991E-4]:2.925057380587E0,(16[&rate=4.207269036411448E-4]:3.791769887732E1,((22[&rate=0.0011548584912074438]:2.071046630595E0,21[&rate=4.3868659995752537E-4]:2.071046630595E0)[&rate=4.026198642470861E-4]:6.066463926569E0,20[&rate=4.7473841342750436E-4]:8.137510557163E0)[&rate=0.0013838364661039504]:2.978018832015E1)[&rate=0.0013838364661039504]:3.190640902953E1)[&rate=6.042162472888422E-4]:1.428360730748E0,12[&rate=9.190939902796487E-4]:7.125246863759E1)[&rate=7.399754655573026E-4]:3.189233510893E0,25[&rate=7.754774301613059E-4]:7.444170214849E1)[&rate=5.821188373660625E-4]:4.679052163752E-1,(((19[&rate=7.399754655573026E-4]:1.793832942114E1,18[&rate=3.1283005527037015E-4]:1.793832942114E1)[&rate=5.310142203528704E-4]:5.141525519247E1,((11[&rate=3.652019589964121E-4]:1.662289615311E1,29[&rate=7.94941085193674E-4]:1.662289615311E1)[&rate=0.0012450593268095436]:5.092868972726E1,(33[&rate=8.382721571796324E-4]:5.970321322293E1,13[&rate=4.656685065387099E-4]:5.970321322293E1)[&rate=3.7478100835141784E-4]:7.848372657437E0)[&rate=7.08128762174361E-4]:1.80199873324E0)[&rate=6.52427132114871E-4]:2.38168456188E0,((10[&rate=7.08128762174361E-4]:2.420831777324E1,31[&rate=5.310142203528704E-4]:2.420831777324E1)[&rate=3.7478100835141784E-4]:4.712520710659E1,23[&rate=4.4765821540377997E-4]:7.133352487982E1)[&rate=5.93025670639827E-4]:4.017442956671E-1)[&rate=2.1529192848028029E-4]:3.174338189374E0)[&rate=7.399754655573026E-4]:3.033203992796E0,(17[&rate=8.382721571796324E-4]:7.027418669937E1,(27[&rate=4.117020290474794E-4]:3.200912486759E1,28[&rate=7.572077879037006E-4]:3.200912486759E1)[&rate=7.399754655573026E-4]:3.826506183178E1)[&rate=6.933166094823062E-4]:7.668624658287E0)[&rate=0.001034653151050146]:4.963836691038E1); +tree STATE_1230000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55100.41569701832,EEF_ucld_branchRates=-266.168517335019,lnP=-55100.41569701832,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.008944245009175E-4]:9.011731128748E0,9[&rate=4.7760444139708475E-4]:9.011731128748E0)[&rate=6.318912100450975E-4]:6.852797305253E0,15[&rate=7.883889047153635E-4]:1.5864528434E1)[&rate=6.772497006034407E-4]:9.544607650725E1,(14[&rate=0.0014042872210225286]:4.396093360909E1,24[&rate=0.0014042872210225286]:4.396093360909E1)[&rate=0.0010739687739907719]:6.734967133216E1)[&rate=8.625945688028441E-4]:1.66136261398E1,(((25[&rate=7.57045259065675E-4]:7.447597201015E1,(((16[&rate=2.0971469470177067E-4]:4.162210325784E1,((22[&rate=0.0012738900649748306]:3.291519265502E0,21[&rate=4.210045171071777E-4]:3.291519265502E0)[&rate=4.210045171071777E-4]:4.604277439306E0,20[&rate=5.516287929507339E-4]:7.895796704808E0)[&rate=8.625945688028441E-4]:3.372630655303E1)[&rate=0.0010739687739907719]:2.865880217384E1,(((30[&rate=7.883889047153635E-4]:4.792330372812E1,26[&rate=4.959658652683034E-4]:4.792330372812E1)[&rate=7.019559486150385E-4]:9.591020277174E0,32[&rate=4.591107021816338E-4]:5.751432400529E1)[&rate=6.772497006034407E-4]:6.117551594769E0,((((4[&rate=5.805525893150549E-4]:2.684446854834E0,3[&rate=7.57045259065675E-4]:2.684446854834E0)[&rate=2.525037919262159E-4]:1.689639671668E-1,2[&rate=3.5638774068260217E-4]:2.853410822001E0)[&rate=4.497626059181228E-4]:8.264242173314E0,5[&rate=3.1522660642978805E-4]:1.111765299531E1)[&rate=5.143388293491342E-4]:1.936719305147E0,((7[&rate=4.210045171071777E-4]:8.678776171308E0,6[&rate=9.628498444156778E-4]:8.678776171308E0)[&rate=3.904182455614432E-4]:1.170353338113E0,1[&rate=5.707892721320559E-4]:9.849129509421E0)[&rate=3.5638774068260217E-4]:3.205242791041E0)[&rate=5.904598204204804E-4]:5.05775032996E1)[&rate=7.019559486150385E-4]:6.649029831615E0)[&rate=5.707892721320559E-4]:2.589164298629E0,12[&rate=8.053050146780069E-4]:7.28700697303E1)[&rate=4.867922470162448E-4]:1.605902279844E0)[&rate=4.110712739054605E-4]:1.935402527626E0,(((19[&rate=8.232067410795184E-4]:2.11488487283E1,18[&rate=6.894051703435004E-4]:2.11488487283E1)[&rate=4.008944245009175E-4]:5.102939776355E1,((11[&rate=4.008944245009175E-4]:1.692208855192E1,29[&rate=6.539795303115497E-4]:1.692208855192E1)[&rate=8.053050146780069E-4]:5.363350944705E1,(33[&rate=5.904598204204804E-4]:5.67704460411E1,13[&rate=4.6838394932865616E-4]:5.67704460411E1)[&rate=6.428015592967512E-4]:1.378515195787E1)[&rate=9.082256075194421E-4]:1.622648492882E0)[&rate=4.497626059181228E-4]:8.371776944209E-1,((10[&rate=7.57045259065675E-4]:2.837571125358E1,31[&rate=4.3073972863332606E-4]:2.837571125358E1)[&rate=4.7760444139708475E-4]:4.341812300126E1,23[&rate=8.232067410795184E-4]:7.179383425484E1)[&rate=5.707892721320559E-4]:1.221589931438E0)[&rate=7.149440578332835E-4]:3.3959503515E0)[&rate=5.235703285594263E-4]:3.71679141492E0,(17[&rate=8.625945688028441E-4]:7.287253464141E1,(27[&rate=4.008944245009175E-4]:2.942346574355E1,28[&rate=0.0012738900649748306]:2.942346574355E1)[&rate=7.883889047153635E-4]:4.344906889786E1)[&rate=4.867922470162448E-4]:7.255631311283E0)[&rate=0.0010739687739907719]:4.779606512836E1); +tree STATE_1240000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55154.96480420865,EEF_ucld_branchRates=-266.168517335019,lnP=-55154.96480420865,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.236430147953878E-4]:9.081830157791E0,9[&rate=6.642770055444398E-4]:9.081830157791E0)[&rate=0.0012260362185697376]:7.195741408598E0,15[&rate=7.74016411753719E-4]:1.627757156639E1)[&rate=6.8597153153547E-4]:1.032897143971E2,(14[&rate=0.0015904640502024516]:4.777149694677E1,24[&rate=0.0012260362185697376]:4.777149694677E1)[&rate=8.043336851691173E-4]:7.179578901677E1)[&rate=5.953999412859183E-4]:8.482002154254E0,(((25[&rate=6.8597153153547E-4]:7.555975325831E1,(((16[&rate=6.538338252137882E-4]:3.901988434085E1,((22[&rate=4.976111737936231E-4]:3.244587378836E0,21[&rate=4.236430147953878E-4]:3.244587378836E0)[&rate=8.043336851691173E-4]:5.340104330125E0,20[&rate=4.431370103982465E-4]:8.584691708962E0)[&rate=8.567799127855128E-4]:3.043519263189E1)[&rate=0.0012260362185697376]:3.353306874053E1,(((30[&rate=5.239227182104271E-4]:4.841918277636E1,26[&rate=6.336326304103354E-4]:4.841918277636E1)[&rate=4.708843744290644E-4]:1.087269634574E1,32[&rate=7.334657416740047E-4]:5.92918791221E1)[&rate=5.953999412859183E-4]:1.083007777411E1,((((4[&rate=7.887908333773151E-4]:2.523044141906E0,3[&rate=7.089390576513946E-4]:2.523044141906E0)[&rate=9.478945548105896E-4]:1.270485943449E-1,2[&rate=5.953999412859183E-4]:2.650092736251E0)[&rate=9.76901870658232E-4]:7.481155692003E0,5[&rate=5.064030356517215E-4]:1.013124842825E1)[&rate=4.431370103982465E-4]:2.867023537576E0,((7[&rate=4.1345666070553264E-4]:9.601178158637E0,6[&rate=8.381815768365961E-4]:9.601178158637E0)[&rate=4.708843744290644E-4]:1.486206579904E0,1[&rate=5.861902627863762E-4]:1.108738473854E1)[&rate=4.6178505883682033E-4]:1.910887227288E0)[&rate=4.431370103982465E-4]:5.712368493039E1)[&rate=3.029513096795435E-4]:2.430996185165E0)[&rate=7.599198612072052E-4]:1.78294054256E0,12[&rate=7.599198612072052E-4]:7.433589362394E1)[&rate=4.236430147953878E-4]:1.223859634372E0)[&rate=5.064030356517215E-4]:1.297497595915E0,(((19[&rate=4.525467299206954E-4]:1.647764506117E1,18[&rate=6.972798663147471E-4]:1.647764506117E1)[&rate=5.326832109656768E-4]:5.390207500746E1,((11[&rate=4.236430147953878E-4]:1.732544632054E1,29[&rate=8.983511778391508E-4]:1.732544632054E1)[&rate=8.767506253104426E-4]:5.205333110894E1,(33[&rate=8.207534240615259E-4]:5.969048014599E1,13[&rate=4.976111737936231E-4]:5.969048014599E1)[&rate=5.502814382259049E-4]:9.688297283483E0)[&rate=3.9184662075042426E-4]:1.000942639153E0)[&rate=6.972798663147471E-4]:3.281228764161E0,((10[&rate=6.047325805277998E-4]:2.953596139349E1,31[&rate=6.047325805277998E-4]:2.953596139349E1)[&rate=3.9184662075042426E-4]:4.287810195197E1,23[&rate=4.887742735664344E-4]:7.241406334546E1)[&rate=3.3965264164962766E-4]:1.24688548733E0)[&rate=2.3353516106382796E-4]:3.196302021438E0)[&rate=7.464247140967582E-4]:2.70097044311E0,(17[&rate=7.887908333773151E-4]:7.514205453182E1,(27[&rate=4.1345666070553264E-4]:3.172839373438E1,28[&rate=0.0010479915943189518]:3.172839373438E1)[&rate=8.567799127855128E-4]:4.341366079743E1)[&rate=5.680790191740368E-4]:4.416166765523E0)[&rate=0.0010479915943189518]:4.849106682045E1); +tree STATE_1250000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.34858739371,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.34858739371,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.7593390412241615E-4]:1.128453767221E1,9[&rate=5.120167544203494E-4]:1.128453767221E1)[&rate=2.4612679596302926E-4]:7.045435707993E0,15[&rate=4.7593390412241615E-4]:1.83299733802E1)[&rate=0.0010131341646191455]:9.631206797761E1,(14[&rate=0.0015436403272377297]:4.331503428449E1,24[&rate=9.679326360199737E-4]:4.331503428449E1)[&rate=6.81885692316831E-4]:7.132700707332E1)[&rate=0.0010648792922968117]:1.070241036158E1,(((25[&rate=9.679326360199737E-4]:7.144568539248E1,(12[&rate=9.472439748438469E-4]:7.144446814974E1,((16[&rate=7.058084871821155E-4]:3.534647745666E1,((22[&rate=5.463583225712241E-4]:3.439102314845E0,21[&rate=4.36544626390831E-4]:3.439102314845E0)[&rate=6.701720005658637E-4]:4.208504858606E0,20[&rate=4.501853467915935E-4]:7.647607173451E0)[&rate=0.0015436403272377297]:2.769887028321E1)[&rate=8.910756944762019E-4]:3.282809417544E1,(((30[&rate=9.276186306027548E-4]:4.774944856688E1,26[&rate=4.88232496343585E-4]:4.774944856688E1)[&rate=0.0014384415830891151]:9.175275932769E0,32[&rate=3.726398863819391E-4]:5.692472449965E1)[&rate=5.236027179390186E-4]:7.912332098384E0,((((4[&rate=8.263487552781389E-4]:2.004785910254E0,3[&rate=4.7593390412241615E-4]:2.004785910254E0)[&rate=7.69532735662572E-4]:6.185013296545E-1,2[&rate=6.585972701545557E-4]:2.623287239909E0)[&rate=7.305318540798441E-4]:8.404952747051E0,5[&rate=3.2832269930965953E-4]:1.102823998696E1)[&rate=7.83153712212516E-4]:3.396271188542E0,((7[&rate=6.81885692316831E-4]:7.51175898561E0,6[&rate=8.263487552781389E-4]:7.51175898561E0)[&rate=6.93757782321898E-4]:2.098851533011E0,1[&rate=5.799016798643577E-4]:9.610610518621E0)[&rate=4.88232496343585E-4]:4.813900656881E0)[&rate=5.236027179390186E-4]:5.041254542253E1)[&rate=5.120167544203494E-4]:3.337515034073E0)[&rate=6.245198790139762E-4]:3.26989651764E0)[&rate=9.472439748438469E-4]:1.217242741248E-3)[&rate=0.0010131341646191455]:3.24372793639E0,(((19[&rate=0.0012003649119132476]:1.526468694514E1,18[&rate=0.0010380549488153631]:1.526468694514E1)[&rate=4.36544626390831E-4]:5.402445735164E1,((11[&rate=5.910254498651832E-4]:1.558965627505E1,29[&rate=0.0012974541230855654]:1.558965627505E1)[&rate=4.501853467915935E-4]:5.172020186376E1,(33[&rate=8.263487552781389E-4]:6.126005235008E1,13[&rate=6.133150873221203E-4]:6.126005235008E1)[&rate=6.93757782321898E-4]:6.049805788738E0)[&rate=8.575132578767027E-4]:1.979286157971E0)[&rate=0.002059150678896681]:2.051719868671E0,((10[&rate=5.002418995439331E-4]:2.530851066076E1,31[&rate=5.687644294908693E-4]:2.530851066076E1)[&rate=5.350386726772109E-4]:4.599013925146E1,23[&rate=6.357896128556575E-4]:7.129864991222E1)[&rate=0.0010939666376536962]:4.221425323881E-2)[&rate=8.739622191135632E-4]:3.348549163419E0)[&rate=8.115228610530668E-4]:5.183310901283E0,(17[&rate=9.679326360199737E-4]:7.294992952097E1,(27[&rate=8.739622191135632E-4]:2.715851181257E1,28[&rate=0.0011609629998015295]:2.715851181257E1)[&rate=5.687644294908693E-4]:4.57914177084E1)[&rate=9.089311325336518E-4]:6.922794709184E0)[&rate=0.001360058806164613]:4.547172748924E1); +tree STATE_1260000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55141.399120294765,EEF_ucld_branchRates=-266.168517335019,lnP=-55141.399120294765,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.941800920339905E-4]:1.087028189343E1,9[&rate=8.086612970512773E-4]:1.087028189343E1)[&rate=4.199877335378056E-4]:9.474086365592E0,15[&rate=5.833981684033211E-4]:2.034436825902E1)[&rate=7.913883447819794E-4]:9.536104422672E1,(14[&rate=0.0012879466905486238]:4.730263684633E1,24[&rate=0.001154431085021455]:4.730263684633E1)[&rate=7.15321929837261E-4]:6.840277563941E1)[&rate=4.0929855476120285E-4]:1.272674920785E1,(((25[&rate=7.15321929837261E-4]:7.315935132499E1,(12[&rate=8.879685920476361E-4]:7.039972548785E1,((((30[&rate=9.111586446827919E-4]:4.537902753207E1,26[&rate=9.111586446827919E-4]:4.537902753207E1)[&rate=8.879685920476361E-4]:1.017202552694E1,32[&rate=8.268239385221152E-4]:5.5551053059E1)[&rate=2.895585035961266E-4]:9.135004216412E0,((((4[&rate=4.0929855476120285E-4]:2.522000764298E0,2[&rate=7.017135378855026E-4]:2.522000764298E0)[&rate=8.268239385221152E-4]:3.231372224032E-1,3[&rate=0.0018844575396291209]:2.845137986701E0)[&rate=5.833981684033211E-4]:8.997521519166E0,5[&rate=4.611769077940615E-4]:1.184265950587E1)[&rate=5.213539538927427E-4]:3.345258742519E0,((7[&rate=7.017135378855026E-4]:9.691185675652E0,6[&rate=5.012745006207189E-4]:9.691185675652E0)[&rate=7.15321929837261E-4]:1.12285913814E0,1[&rate=3.871402039288855E-4]:1.081404481379E1)[&rate=1.9790093890905075E-4]:4.373873434594E0)[&rate=4.199877335378056E-4]:4.949813902703E1)[&rate=5.941800920339905E-4]:4.286790562174E0,(16[&rate=3.6348050270781446E-4]:3.540173042955E1,((22[&rate=3.7554156502160775E-4]:3.214520050448E0,21[&rate=2.6866723768739076E-4]:3.214520050448E0)[&rate=6.632546885688684E-4]:4.718993417536E0,20[&rate=4.4082495143545747E-4]:7.933513467984E0)[&rate=0.0012879466905486238]:2.746821696156E1)[&rate=0.0010629948792638736]:3.357111740804E1)[&rate=7.591248227350659E-4]:1.426877650257E0)[&rate=4.812668348888244E-4]:2.759625837142E0)[&rate=8.879685920476361E-4]:1.481940541279E0,(((19[&rate=6.392476641596533E-4]:1.287304307766E1,18[&rate=4.510463462069538E-4]:1.287304307766E1)[&rate=5.213539538927427E-4]:5.451292346235E1,((11[&rate=4.304833437092851E-4]:1.458235755595E1,29[&rate=7.913883447819794E-4]:1.458235755595E1)[&rate=8.459954800935214E-4]:5.041583911222E1,(33[&rate=0.0010629948792638736]:5.808066357697E1,13[&rate=5.416450353187968E-4]:5.808066357697E1)[&rate=8.459954800935214E-4]:6.917533091207E0)[&rate=3.9836857401362045E-4]:2.387769871837E0)[&rate=0.0011051988510690563]:4.271561415849E0,((10[&rate=6.051357316258459E-4]:3.309610519748E1,31[&rate=4.304833437092851E-4]:3.309610519748E1)[&rate=5.941800920339905E-4]:3.805705984934E1,23[&rate=4.510463462069538E-4]:7.115316504682E1)[&rate=4.812668348888244E-4]:5.043629090341E-1)[&rate=5.622816134651713E-4]:2.98376391041E0)[&rate=4.912708756949679E-4]:4.417680134818E0,(17[&rate=7.591248227350659E-4]:7.175999238004E1,(27[&rate=3.7554156502160775E-4]:2.884418047082E1,28[&rate=0.0013880959942751724]:2.884418047082E1)[&rate=7.749046669982849E-4]:4.291581190921E1)[&rate=3.7554156502160775E-4]:7.298979621047E0)[&rate=9.633097070314825E-4]:4.937318969251E1); +tree STATE_1270000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55132.34321308806,EEF_ucld_branchRates=-266.168517335019,lnP=-55132.34321308806,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.792016848731595E-4]:9.842673647933E0,9[&rate=0.0011257919442460489]:9.842673647933E0)[&rate=7.227575423510512E-4]:6.991694760296E0,15[&rate=7.542176237838972E-4]:1.683436840823E1)[&rate=8.261531106116021E-4]:1.026377856543E2,(14[&rate=0.0010399834146125]:4.910876519242E1,24[&rate=8.914622767746791E-4]:4.910876519242E1)[&rate=5.808115754240077E-4]:7.036338887014E1)[&rate=3.5607473277891844E-4]:1.031908915267E1,(((25[&rate=5.808115754240077E-4]:7.292554220203E1,((12[&rate=9.163111749771631E-4]:6.85830449535E1,((16[&rate=4.1188677271363785E-4]:3.28079798237E1,((22[&rate=7.542176237838972E-4]:2.568414592238E0,21[&rate=6.935455940794962E-4]:2.568414592238E0)[&rate=2.698482976811609E-4]:7.551684453772E0,20[&rate=7.542176237838972E-4]:1.012009904601E1)[&rate=0.0013253464711003042]:2.268788077769E1)[&rate=0.0013253464711003042]:3.394036950344E1,((30[&rate=7.884491624313214E-4]:4.927026460483E1,26[&rate=6.935455940794962E-4]:4.927026460483E1)[&rate=8.465969755576206E-4]:8.487558449255E0,32[&rate=3.9030680715321887E-4]:5.775782305409E1)[&rate=3.9030680715321887E-4]:8.99052627305E0)[&rate=4.3290097739798845E-4]:1.834695626364E0)[&rate=2.4913693642455694E-4]:1.856365554425E0,((((4[&rate=5.476201828961527E-4]:1.55550251138E0,2[&rate=4.948305179919384E-4]:1.55550251138E0)[&rate=0.001988820846835081]:8.775165247689E-1,3[&rate=3.9030680715321887E-4]:2.433019036149E0)[&rate=8.465969755576206E-4]:8.784164979891E0,5[&rate=6.038820978058286E-4]:1.121718401604E1)[&rate=6.279066583106705E-4]:2.54074296033E0,((7[&rate=4.224471612700787E-4]:9.655401407029E0,6[&rate=8.914622767746791E-4]:9.655401407029E0)[&rate=4.741900451355997E-4]:1.142001750097E0,1[&rate=3.4389249293692765E-4]:1.079740315713E1)[&rate=0.0011257919442460489]:2.960523819243E0)[&rate=5.585215794302609E-4]:5.668148353156E1)[&rate=8.068141122266289E-4]:2.486131694108E0)[&rate=4.3290097739798845E-4]:1.774379835314E0,(((19[&rate=4.741900451355997E-4]:1.328936133427E1,18[&rate=6.935455940794962E-4]:1.328936133427E1)[&rate=4.011863411182195E-4]:5.686197575716E1,((33[&rate=8.465969755576206E-4]:6.26502613837E1,13[&rate=4.011863411182195E-4]:6.26502613837E1)[&rate=2.226919614766592E-4]:5.943014079757E0,(11[&rate=5.262132704505441E-4]:1.818633926603E1,29[&rate=5.808115754240077E-4]:1.818633926603E1)[&rate=7.542176237838972E-4]:5.040693619742E1)[&rate=5.156726423139198E-4]:1.558061627975E0)[&rate=4.3290097739798845E-4]:1.514833264136E0,((10[&rate=7.078980583701457E-4]:3.040856492385E1,31[&rate=3.67814452645611E-4]:3.040856492385E1)[&rate=3.5607473277891844E-4]:4.004894035785E1,23[&rate=4.5360247192260006E-4]:7.04575052817E1)[&rate=8.914622767746791E-4]:1.208665073862E0)[&rate=3.4389249293692765E-4]:3.033751681784E0)[&rate=4.844940753298634E-4]:2.396330550121E0,(17[&rate=0.0010800051900569539]:7.112218455816E1,(27[&rate=5.695790677333439E-4]:2.852649273496E1,28[&rate=0.0010044028855206808]:2.852649273496E1)[&rate=6.661787418863078E-4]:4.259569182319E1)[&rate=8.683029239028272E-4]:5.974068029314E0)[&rate=0.0014355257562238314]:5.269499062775E1); +tree STATE_1280000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55155.12108878095,EEF_ucld_branchRates=-266.168517335019,lnP=-55155.12108878095,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.965473671098613E-4]:9.376322470182E0,9[&rate=3.590276057316461E-4]:9.376322470182E0)[&rate=9.054709824468917E-4]:6.469776053343E0,15[&rate=5.272702023939622E-4]:1.584609852353E1)[&rate=8.598998552651236E-4]:1.057745364762E2,(14[&rate=0.0010531707931961342]:5.005694162347E1,24[&rate=9.305460338742392E-4]:5.005694162347E1)[&rate=5.497656685233436E-4]:7.156369337624E1)[&rate=7.823304349236815E-4]:4.657891270079E0,(((25[&rate=5.965473671098613E-4]:7.464025555898E1,(12[&rate=8.003473323399923E-4]:7.203377539357E1,((((((4[&rate=5.612084788431009E-4]:1.508534591396E0,2[&rate=4.833218438505375E-4]:1.508534591396E0)[&rate=4.1759194456558334E-4]:1.322893084915E0,3[&rate=2.478384554404229E-4]:2.831427676311E0)[&rate=3.590276057316461E-4]:9.716418869645E0,5[&rate=2.692524744390098E-4]:1.254784654596E1)[&rate=5.845793505751545E-4]:2.833434222686E0,((7[&rate=4.287081862056566E-4]:9.744407259853E0,6[&rate=8.598998552651236E-4]:9.744407259853E0)[&rate=3.949098479143762E-4]:6.471672216971E-1,1[&rate=4.3972258629015095E-4]:1.039157448155E1)[&rate=2.478384554404229E-4]:4.989706287091E0)[&rate=4.833218438505375E-4]:5.418497640873E1,((30[&rate=6.87779193857849E-4]:4.732888697958E1,26[&rate=7.650709178765075E-4]:4.732888697958E1)[&rate=7.325292880542264E-4]:1.363303039147E1,32[&rate=4.3972258629015095E-4]:6.096191737106E1)[&rate=4.833218438505375E-4]:8.604339806315E0)[&rate=4.287081862056566E-4]:7.552834129085E-1,(16[&rate=6.211557987022819E-4]:3.416478187443E1,((22[&rate=7.823304349236815E-4]:2.577130066233E0,21[&rate=8.819924612456995E-4]:2.577130066233E0)[&rate=0.0021398746754286435]:5.795258692735E0,20[&rate=4.506654152537393E-4]:8.372388758968E0)[&rate=0.0015256606874658378]:2.579239311546E1)[&rate=0.0014043227981303346]:3.615675871585E1)[&rate=8.819924612456995E-4]:1.712234803291E0)[&rate=3.8325584682593727E-4]:2.606480165412E0)[&rate=7.171226187084766E-4]:5.777663303101E-1,(((19[&rate=0.0010919131215101226]:1.469651810415E1,18[&rate=0.0011355511340864423]:1.469651810415E1)[&rate=3.590276057316461E-4]:5.739232066762E1,((33[&rate=7.171226187084766E-4]:6.25106308378E1,13[&rate=3.949098479143762E-4]:6.25106308378E1)[&rate=7.823304349236815E-4]:5.081940457182E0,(11[&rate=8.819924612456995E-4]:2.028558237217E1,29[&rate=3.949098479143762E-4]:2.028558237217E1)[&rate=7.823304349236815E-4]:4.730698892282E1)[&rate=4.06339261619816E-4]:4.496267476783E0)[&rate=0.0011355511340864423]:1.421340537278E0,((10[&rate=6.468196112908974E-4]:2.827356532015E1,31[&rate=3.4628889502194825E-4]:2.827356532015E1)[&rate=5.728065141729884E-4]:4.496006147954E1,23[&rate=5.845793505751545E-4]:7.323362679968E1)[&rate=4.942252796083144E-4]:2.765525093636E-1)[&rate=3.713191711741876E-4]:1.707842580247E0)[&rate=9.574777390451138E-4]:5.318626359918E0,(17[&rate=9.054709824468917E-4]:7.417093984392E1,(27[&rate=7.484926471383439E-4]:3.06653119137E1,28[&rate=0.0010183082847891255]:3.06653119137E1)[&rate=9.305460338742392E-4]:4.350562793022E1)[&rate=3.4628889502194825E-4]:6.365708405294E0)[&rate=0.0015256606874658378]:4.574187802057E1); +tree STATE_1290000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55144.55479300203,EEF_ucld_branchRates=-266.168517335019,lnP=-55144.55479300203,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.039432217924652E-4]:9.396491810929E0,9[&rate=6.087474740306766E-4]:9.396491810929E0)[&rate=2.952048641482632E-4]:1.017067187296E1,15[&rate=4.8024592124351026E-4]:1.956716368389E1)[&rate=8.810150087191867E-4]:9.287141939955E1,(14[&rate=0.0010140022869874429]:4.81949816113E1,24[&rate=0.0011381071411997016]:4.81949816113E1)[&rate=6.955218332899894E-4]:6.424360147214E1)[&rate=0.0012709979502969477]:1.360932213935E1,((((12[&rate=8.447408867687516E-4]:6.858684258418E1,((((((4[&rate=4.558702147762144E-4]:1.752816977588E0,2[&rate=9.645652670283671E-4]:1.752816977588E0)[&rate=0.0010413486866019549]:4.048374619927E-1,3[&rate=4.1711349681696055E-4]:2.15765443958E0)[&rate=6.697862050415918E-4]:1.226347080273E1,5[&rate=4.8024592124351026E-4]:1.442112524232E1)[&rate=0.0016081030737343806]:1.238258794156E0,((7[&rate=4.3041782997860445E-4]:8.611959542189E0,6[&rate=5.735720407549848E-4]:8.611959542189E0)[&rate=6.327026470944442E-4]:7.879668214448E-1,1[&rate=6.697862050415918E-4]:9.399926363634E0)[&rate=7.952546310964095E-4]:6.259457672837E0)[&rate=5.039432217924652E-4]:5.004670354465E1,((30[&rate=6.572443298341171E-4]:4.675128054603E1,26[&rate=8.111790612640112E-4]:4.675128054603E1)[&rate=9.206583783890526E-4]:9.876370676556E0,32[&rate=4.032927826023763E-4]:5.662765122258E1)[&rate=4.681644760669467E-4]:9.078436358535E0)[&rate=0.0010140022869874429]:2.115217798816E0,(16[&rate=5.15630836107543E-4]:3.287667069061E1,((22[&rate=0.0012209296385452346]:1.779964283452E0,21[&rate=4.1711349681696055E-4]:1.779964283452E0)[&rate=4.1711349681696055E-4]:6.943626078218E0,20[&rate=0.0010140022869874429]:8.72359036167E0)[&rate=0.002204751392490196]:2.415308032894E1)[&rate=8.625022924798325E-4]:3.494463468932E1)[&rate=0.0016081030737343806]:7.655372042489E-1)[&rate=3.88818351550382E-4]:2.183389596041E0,25[&rate=7.648609189438319E-4]:7.077023218022E1)[&rate=4.558702147762144E-4]:2.37656867325E0,(((19[&rate=6.448901290833521E-4]:1.438844569382E1,18[&rate=8.625022924798325E-4]:1.438844569382E1)[&rate=4.032927826023763E-4]:5.599522601485E1,((11[&rate=2.952048641482632E-4]:2.083834196275E1,29[&rate=6.327026470944442E-4]:2.083834196275E1)[&rate=9.645652670283671E-4]:4.788044665436E1,(33[&rate=0.0011381071411997016]:5.941007681432E1,13[&rate=5.61970962757621E-4]:5.941007681432E1)[&rate=8.111790612640112E-4]:9.308711802779E0)[&rate=9.645652670283671E-4]:1.664883091574E0)[&rate=9.206583783890526E-4]:1.376996615387E0,((10[&rate=4.921593858346972E-4]:2.500014685199E1,31[&rate=8.447408867687516E-4]:2.500014685199E1)[&rate=5.503983624823375E-4]:4.53196110857E1,23[&rate=6.572443298341171E-4]:7.031975793769E1)[&rate=3.1892843975205303E-4]:1.440910386371E0)[&rate=7.222882387406479E-4]:1.38613252941E0)[&rate=4.4330969163319534E-4]:4.891556480619E0,(17[&rate=7.952546310964095E-4]:6.836064350579E1,(27[&rate=5.503983624823375E-4]:3.296519522956E1,28[&rate=0.0011029279373527803]:3.296519522956E1)[&rate=8.625022924798325E-4]:3.539544827623E1)[&rate=0.0010140022869874429]:9.677713828305E0)[&rate=0.00148848390500147]:4.800954788869E1); +tree STATE_1300000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55116.22950707878,EEF_ucld_branchRates=-266.168517335019,lnP=-55116.22950707878,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.59735807001709E-4]:1.170291517371E1,9[&rate=7.168500197365672E-4]:1.170291517371E1)[&rate=7.306514125259347E-4]:7.245158817852E0,15[&rate=3.8641560632117017E-4]:1.894807399156E1)[&rate=7.035507578406755E-4]:9.87960306665E1,(14[&rate=0.0012931985098617196]:4.931201626758E1,24[&rate=8.474590178632765E-4]:4.931201626758E1)[&rate=7.756779709608263E-4]:6.843208839048E1)[&rate=4.8408530686537316E-4]:1.137199936049E1,((((12[&rate=8.474590178632765E-4]:7.440680530829E1,((((30[&rate=9.420511856949852E-4]:5.056251192327E1,26[&rate=4.369256913051159E-4]:5.056251192327E1)[&rate=6.782672665162354E-4]:1.150901788009E1,32[&rate=3.970096483321121E-4]:6.207152980337E1)[&rate=3.7545477211336446E-4]:8.296819965008E0,((((4[&rate=6.907043131646341E-4]:2.074934020848E0,3[&rate=4.93405319810432E-4]:2.074934020848E0)[&rate=4.8408530686537316E-4]:2.048288274124E-1,2[&rate=4.073066788266469E-4]:2.27976284826E0)[&rate=3.7545477211336446E-4]:1.353277673923E1,5[&rate=5.998826981909519E-4]:1.581253958749E1)[&rate=4.46503743001643E-4]:2.15431593424E0,((7[&rate=3.970096483321121E-4]:1.070136831828E1,6[&rate=8.278997042581597E-4]:1.070136831828E1)[&rate=6.430474228787698E-4]:1.921643920579E0,1[&rate=4.46503743001643E-4]:1.262301223886E1)[&rate=4.2722278003609935E-4]:5.343843282867E0)[&rate=5.79508076867139E-4]:5.240149424665E1)[&rate=4.173624987035051E-4]:1.938695523069E0,(16[&rate=5.695552363413548E-4]:3.488977289377E1,((22[&rate=9.420511856949852E-4]:2.18156383859E0,21[&rate=7.450113674476805E-4]:2.18156383859E0)[&rate=5.309171753265536E-4]:7.520164381051E0,20[&rate=7.306514125259347E-4]:9.701728219641E0)[&rate=0.0017268867462233478]:2.518804467413E1)[&rate=7.306514125259347E-4]:3.741727239767E1)[&rate=0.0012931985098617196]:2.099760016842E0)[&rate=3.7545477211336446E-4]:1.117717900719E0,25[&rate=7.756779709608263E-4]:7.552452320901E1)[&rate=8.095143414151853E-4]:1.384653051417E0,(((19[&rate=6.319009947547549E-4]:1.360723137119E1,18[&rate=8.683815700325703E-4]:1.360723137119E1)[&rate=3.7545477211336446E-4]:6.037779775219E1,((11[&rate=5.59735807001709E-4]:2.282814073323E1,29[&rate=5.695552363413548E-4]:2.282814073323E1)[&rate=9.715965632520719E-4]:5.035633888525E1,(33[&rate=8.278997042581597E-4]:6.000004955216E1,13[&rate=3.3931420866572E-4]:6.000004955216E1)[&rate=4.2722278003609935E-4]:1.318443006632E1)[&rate=2.735060476384681E-4]:8.005495049095E-1)[&rate=2.735060476384681E-4]:1.332986213884E0,((10[&rate=7.168500197365672E-4]:2.466648572082E1,31[&rate=5.89611292859205E-4]:2.466648572082E1)[&rate=2.9358419904410515E-4]:4.970366738365E1,23[&rate=4.653946719758301E-4]:7.437015310447E1)[&rate=6.782672665162354E-4]:9.478622327999E-1)[&rate=4.93405319810432E-4]:1.591160923149E0)[&rate=9.420511856949852E-4]:1.938249884277E0,(17[&rate=8.095143414151853E-4]:7.195871836156E1,(27[&rate=3.7545477211336446E-4]:3.305780664904E1,28[&rate=0.0010423896324149673]:3.305780664904E1)[&rate=5.59735807001709E-4]:3.890091171251E1)[&rate=8.474590178632765E-4]:6.888707783142E0)[&rate=0.0012931985098617196]:5.026867787386E1); +tree STATE_1310000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55140.96694267298,EEF_ucld_branchRates=-266.168517335019,lnP=-55140.96694267298,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.988674925122007E-4]:1.043689047176E1,9[&rate=5.058889965524765E-4]:1.043689047176E1)[&rate=2.4941543506937745E-4]:4.83045015668E0,15[&rate=9.132082699401146E-4]:1.526734062844E1)[&rate=8.318168442553656E-4]:1.035526475369E2,(14[&rate=0.00142615782472543]:4.553408589455E1,24[&rate=8.504582666961033E-4]:4.553408589455E1)[&rate=7.971679162523477E-4]:7.328590227078E1)[&rate=0.0010210387738082613]:6.397996069538E0,((((12[&rate=9.905145293690654E-4]:7.533219818484E1,(((((4[&rate=5.264642961069288E-4]:1.912853849069E0,2[&rate=0.0013234790459352378]:1.912853849069E0)[&rate=9.132082699401146E-4]:7.435696501323E-1,3[&rate=7.654182332212986E-4]:2.656423499202E0)[&rate=7.654182332212986E-4]:1.248357860229E1,5[&rate=3.869432354197096E-4]:1.51400021015E1)[&rate=4.853089407304815E-4]:1.415151625279E0,((7[&rate=4.5404954817196766E-4]:9.559288008933E0,6[&rate=8.909914235419271E-4]:9.559288008933E0)[&rate=2.985193062479921E-4]:1.256668673813E0,1[&rate=5.896166536640857E-4]:1.081595668275E1)[&rate=3.1676210513098107E-4]:5.739197044028E0)[&rate=6.343082915030767E-4]:5.518334425888E1,(((30[&rate=6.825422987726087E-4]:5.842448684577E1,26[&rate=6.1160601754234E-4]:5.842448684577E1)[&rate=7.654182332212986E-4]:6.164940330566E0,32[&rate=3.869432354197096E-4]:6.458942717634E1)[&rate=5.16167540148099E-4]:6.660923322771E0,(16[&rate=3.988674925122007E-4]:3.242386911328E1,((22[&rate=8.701342138032625E-4]:3.284312348937E0,21[&rate=4.1041034163159513E-4]:3.284312348937E0)[&rate=5.896166536640857E-4]:7.975588048879E0,20[&rate=7.504479402456898E-4]:1.125990039782E1)[&rate=0.0019348362196393116]:2.116396871546E1)[&rate=8.701342138032625E-4]:3.882648138583E1)[&rate=7.360020646330965E-4]:4.881474865434E-1)[&rate=6.700693478909562E-4]:3.593700199181E0)[&rate=7.360020646330965E-4]:1.614503148307E-1,25[&rate=5.896166536640857E-4]:7.549364849967E1)[&rate=3.7454271853246715E-4]:1.642580146972E0,(((19[&rate=8.701342138032625E-4]:1.545733146932E1,18[&rate=6.005319252345768E-4]:1.545733146932E1)[&rate=3.7454271853246715E-4]:5.642752373783E1,((11[&rate=6.005319252345768E-4]:2.22382604358E1,29[&rate=4.1041034163159513E-4]:2.22382604358E1)[&rate=7.504479402456898E-4]:4.82625558205E1,(33[&rate=0.001054843752334472]:5.952525684885E1,13[&rate=4.1041034163159513E-4]:5.952525684885E1)[&rate=4.5404954817196766E-4]:1.097555940745E1)[&rate=4.7496519138178443E-4]:1.384038950855E0)[&rate=9.905145293690654E-4]:1.421697975266E0,((10[&rate=7.220305670650937E-4]:2.063529370569E1,31[&rate=4.434207066278796E-4]:2.063529370569E1)[&rate=2.985193062479921E-4]:5.246589938567E1,23[&rate=4.6455430218954904E-4]:7.310119309136E1)[&rate=5.058889965524765E-4]:2.0536009106E-1)[&rate=7.654182332212986E-4]:3.829675464218E0)[&rate=6.228580832360526E-4]:1.185608470405E0,(17[&rate=0.0011360694639734488]:7.058571658017E1,(27[&rate=4.3263301442972047E-4]:2.712045854725E1,28[&rate=9.370046689971604E-4]:2.712045854725E1)[&rate=8.504582666961033E-4]:4.346525803292E1)[&rate=5.681897643302158E-4]:7.736120536869E0)[&rate=0.0015840400836317327]:4.689614711783E1); +tree STATE_1320000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55145.3514837849,EEF_ucld_branchRates=-266.168517335019,lnP=-55145.3514837849,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.76919368360792E-4]:9.946940913099E0,9[&rate=4.1511599663206396E-4]:9.946940913099E0)[&rate=4.8236976119610367E-4]:6.034762597551E0,15[&rate=5.76919368360792E-4]:1.598170351065E1)[&rate=6.307738020355539E-4]:1.029721168606E2,(14[&rate=8.997914531298059E-4]:4.750659011099E1,24[&rate=4.898810239672585E-4]:4.750659011099E1)[&rate=0.0010008597837225805]:7.144723026025E1)[&rate=5.191332971456053E-4]:1.081020619124E1,((((12[&rate=7.727250311979575E-4]:7.53976968528E1,(((((4[&rate=3.5438660087746935E-4]:1.829431436361E0,2[&rate=8.177660736716523E-4]:1.829431436361E0)[&rate=5.119042318277712E-4]:7.165334694378E-1,3[&rate=5.917898072917896E-4]:2.545964905799E0)[&rate=6.73893230179506E-4]:1.340360292987E1,5[&rate=4.5901359783638134E-4]:1.594956783567E1)[&rate=7.471291643623131E-4]:1.09589667188E0,((7[&rate=7.028740923921926E-4]:8.707196244682E0,6[&rate=8.757474487642202E-4]:8.707196244682E0)[&rate=6.832374241040475E-4]:2.918965619872E0,1[&rate=3.126534338204958E-4]:1.162616186455E1)[&rate=6.73893230179506E-4]:5.419302642996E0)[&rate=5.695884206973755E-4]:5.786127604056E1,(((30[&rate=6.227150760440991E-4]:5.384224538886E1,26[&rate=5.695884206973755E-4]:5.384224538886E1)[&rate=7.595699072269444E-4]:8.344210217079E0,32[&rate=5.263315920445214E-4]:6.218645560594E1)[&rate=5.046299195652986E-4]:8.612642486269E0,(16[&rate=4.508548421813411E-4]:3.800019331404E1,((22[&rate=7.471291643623131E-4]:3.544108056815E0,21[&rate=4.3373197804097137E-4]:3.544108056815E0)[&rate=4.1511599663206396E-4]:5.452384307922E0,20[&rate=7.353099743004154E-4]:8.996492364737E0)[&rate=0.0013042377387003923]:2.900370094931E1)[&rate=7.727250311979575E-4]:3.279890477816E1)[&rate=7.353099743004154E-4]:4.107642455901E0)[&rate=7.353099743004154E-4]:4.90956304699E-1)[&rate=6.73893230179506E-4]:2.412052124787E0,25[&rate=6.559986098006888E-4]:7.780974897759E1)[&rate=5.917898072917896E-4]:1.211344298879E0,(((19[&rate=6.070197964204931E-4]:1.800531853006E1,18[&rate=4.8236976119610367E-4]:1.800531853006E1)[&rate=3.5438660087746935E-4]:5.42088465776E1,((11[&rate=5.191332971456053E-4]:1.565696371011E1,29[&rate=8.352545621018388E-4]:1.565696371011E1)[&rate=5.76919368360792E-4]:5.421539682558E1,(33[&rate=4.4244493977029816E-4]:6.166045088526E1,13[&rate=4.4244493977029816E-4]:6.166045088526E1)[&rate=7.727250311979575E-4]:8.211909650437E0)[&rate=8.016620031693609E-4]:2.341804571968E0)[&rate=6.832374241040475E-4]:4.115976759203E0,((10[&rate=4.3373197804097137E-4]:2.144367660015E1,31[&rate=6.832374241040475E-4]:2.144367660015E1)[&rate=4.8236976119610367E-4]:5.395595490906E1,23[&rate=4.246505350606616E-4]:7.539963150921E1)[&rate=3.8242090364939106E-4]:9.305103576606E-1)[&rate=6.73893230179506E-4]:2.690951409602E0)[&rate=4.246505350606616E-4]:6.6636917167E0,(17[&rate=7.727250311979575E-4]:7.753340219262E1,(27[&rate=6.832374241040475E-4]:3.299236388267E1,28[&rate=0.0010543796552083074]:3.299236388267E1)[&rate=4.3373197804097137E-4]:4.454103830995E1)[&rate=5.550768167184186E-4]:8.151382800547E0)[&rate=0.0011344551453480733]:4.407924156931E1); +tree STATE_1330000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55145.30263896374,EEF_ucld_branchRates=-266.168517335019,lnP=-55145.30263896374,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.920800003552209E-4]:7.703462259216E0,9[&rate=8.644366508332302E-4]:7.703462259216E0)[&rate=3.7985457365216814E-4]:8.429615571707E0,15[&rate=4.864814306679694E-4]:1.613307783092E1)[&rate=7.963041900247137E-4]:9.077159797243E1,(14[&rate=0.0011757946616699243]:4.802761296986E1,24[&rate=0.0010269986196701079]:4.802761296986E1)[&rate=9.984883635338491E-4]:5.887706283349E1)[&rate=0.0010927933973366329]:2.168697434658E1,((((12[&rate=9.478564534657445E-4]:6.721066318336E1,((16[&rate=4.864814306679694E-4]:3.362958819224E1,((22[&rate=4.972388885615076E-4]:3.10837600682E0,21[&rate=5.50408045094477E-4]:3.10837600682E0)[&rate=7.963041900247137E-4]:5.114945419446E0,20[&rate=7.809324796812648E-4]:8.223321426266E0)[&rate=0.0014716225656306364]:2.540626676597E1)[&rate=8.835517501705293E-4]:3.168671327312E1,(((30[&rate=7.963041900247137E-4]:4.688796133238E1,26[&rate=6.267592754034485E-4]:4.688796133238E1)[&rate=9.250960133045228E-4]:7.761299029876E0,32[&rate=4.1853174021812967E-4]:5.464926036226E1)[&rate=4.1853174021812967E-4]:8.3706184527E0,((((4[&rate=9.250960133045228E-4]:1.932020677131E0,2[&rate=2.1615533129271222E-4]:1.932020677131E0)[&rate=7.809324796812648E-4]:5.629215565846E-1,3[&rate=6.381637697375828E-4]:2.494942233716E0)[&rate=8.288922392354498E-4]:1.16518003219E1,5[&rate=4.061815748098438E-4]:1.414674255561E1)[&rate=8.644366508332302E-4]:2.32607714826E0,((7[&rate=4.3048225216254707E-4]:1.015774448793E1,6[&rate=9.478564534657445E-4]:1.015774448793E1)[&rate=6.381637697375828E-4]:8.519460318665E-1,1[&rate=5.50408045094477E-4]:1.10096905198E1)[&rate=3.1443142076645054E-4]:5.463129184076E0)[&rate=5.93436149303632E-4]:4.654705911108E1)[&rate=6.15515635831176E-4]:2.296422650394E0)[&rate=6.15515635831176E-4]:1.89436171801E0)[&rate=7.809324796812648E-4]:2.372639640471E0,25[&rate=7.963041900247137E-4]:6.958330282383E1)[&rate=4.061815748098438E-4]:4.06220826455E0,((((11[&rate=4.534774415688267E-4]:1.876467808031E1,29[&rate=5.185613993546539E-4]:1.876467808031E1)[&rate=6.267592754034485E-4]:4.869020828309E1,(33[&rate=9.478564534657445E-4]:5.500339939219E1,13[&rate=6.615349504165037E-4]:5.500339939219E1)[&rate=3.1443142076645054E-4]:1.245148697121E1)[&rate=0.0016322844698275763]:1.336654750797E0,(19[&rate=9.037216918371041E-4]:1.715194295217E1,18[&rate=6.381637697375828E-4]:1.715194295217E1)[&rate=4.3048225216254707E-4]:5.163959816202E1)[&rate=5.397830689284798E-4]:2.39971468124E0,((10[&rate=7.111541339738366E-4]:2.184027018874E1,31[&rate=4.534774415688267E-4]:2.184027018874E1)[&rate=4.1853174021812967E-4]:4.842136607569E1,23[&rate=4.1853174021812967E-4]:7.026163626443E1)[&rate=0.001058225055366865]:9.296195309961E-1)[&rate=7.111541339738366E-4]:2.454255292954E0)[&rate=7.809324796812648E-4]:4.008358278038E0,(17[&rate=7.517419611962864E-4]:6.740256680429E1,(27[&rate=5.291741074700119E-4]:2.661667141988E1,28[&rate=0.0014716225656306364]:2.661667141988E1)[&rate=4.864814306679694E-4]:4.078589538441E1)[&rate=0.0014716225656306364]:1.025130256213E1)[&rate=9.478564534657445E-4]:5.093778078351E1); +tree STATE_1340000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55118.57112156718,EEF_ucld_branchRates=-266.168517335019,lnP=-55118.57112156718,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.425774147057012E-4]:1.071278106267E1,9[&rate=7.987459704723944E-4]:1.071278106267E1)[&rate=2.914607363093562E-4]:7.15024574907E0,15[&rate=3.7515416798814997E-4]:1.786302681174E1)[&rate=7.091319246557721E-4]:9.826308795989E1,(14[&rate=0.0016818509836551408]:4.685120451276E1,24[&rate=7.987459704723944E-4]:4.685120451276E1)[&rate=0.0010511448457717863]:6.927491025887E1)[&rate=0.0016818509836551408]:1.314806656157E1,((((12[&rate=7.091319246557721E-4]:7.351052051268E1,(((30[&rate=8.897654699911149E-4]:4.78019549896E1,26[&rate=6.354919727125041E-4]:4.78019549896E1)[&rate=4.7071526889885156E-4]:1.093132549401E1,32[&rate=3.297429194003855E-4]:5.873328048361E1)[&rate=2.442996782926037E-4]:1.206800160819E1,((16[&rate=4.389723569621661E-4]:3.707605158672E1,((22[&rate=5.838689769527236E-4]:3.105081856116E0,21[&rate=0.0014896195568288102]:3.105081856116E0)[&rate=7.604105800855046E-4]:6.542379496988E0,20[&rate=3.7515416798814997E-4]:9.647461353103E0)[&rate=0.0011452630938419367]:2.742859023362E1)[&rate=0.0014896195568288102]:3.326064693027E1,((((4[&rate=2.240835407059997E-4]:1.956252346197E0,3[&rate=5.717022787222517E-4]:1.956252346197E0)[&rate=5.597800638342267E-4]:2.887921327012E-1,2[&rate=7.255101815098818E-4]:2.245044478899E0)[&rate=4.073331541069447E-4]:1.189457315739E1,5[&rate=3.529683015198361E-4]:1.413961763629E1)[&rate=3.415176979765365E-4]:2.040861569918E0,((7[&rate=3.967042877358043E-4]:1.083732152997E1,6[&rate=4.389723569621661E-4]:1.083732152997E1)[&rate=9.456917892111143E-4]:2.816214321114E-1,1[&rate=3.415176979765365E-4]:1.111894296208E1)[&rate=8.64789814399056E-4]:5.061536244123E0)[&rate=4.6008895961242326E-4]:5.415621931079E1)[&rate=5.48079783506853E-4]:4.645835748074E-1)[&rate=6.354919727125041E-4]:2.709238420884E0)[&rate=3.297429194003855E-4]:1.643701951196E0,25[&rate=7.091319246557721E-4]:7.515422246388E1)[&rate=3.415176979765365E-4]:1.562257432175E0,((((33[&rate=8.897654699911149E-4]:6.180651506387E1,13[&rate=3.7515416798814997E-4]:6.180651506387E1)[&rate=7.425774147057012E-4]:8.814726450282E0,(11[&rate=4.7071526889885156E-4]:1.417599816577E1,29[&rate=7.091319246557721E-4]:1.417599816577E1)[&rate=8.897654699911149E-4]:5.644524334839E1)[&rate=7.790987649050268E-4]:1.322453674192E0,(19[&rate=7.255101815098818E-4]:1.713452347746E1,18[&rate=0.001012301417134574]:1.713452347746E1)[&rate=5.365801950322216E-4]:5.480917171088E1)[&rate=1.5749487574162765E-4]:3.006079052846E0,((10[&rate=5.48079783506853E-4]:2.039958295344E1,31[&rate=8.64789814399056E-4]:2.039958295344E1)[&rate=3.415176979765365E-4]:5.187159943134E1,23[&rate=4.073331541069447E-4]:7.227118238479E1)[&rate=4.921966807710647E-4]:2.678591856405E0)[&rate=4.284427592948276E-4]:1.766705654863E0)[&rate=5.597800638342267E-4]:1.652046261644E0,(17[&rate=9.77399492257163E-4]:6.540603314803E1,(27[&rate=5.597800638342267E-4]:2.676235534452E1,28[&rate=6.635009015969945E-4]:2.676235534452E1)[&rate=8.897654699911149E-4]:3.864367780351E1)[&rate=2.240835407059997E-4]:1.296249300967E1)[&rate=8.414308463976178E-4]:5.090565517551E1); +tree STATE_1350000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55138.548908553275,EEF_ucld_branchRates=-266.168517335019,lnP=-55138.548908553275,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.1419014849046835E-4]:1.039759783966E1,9[&rate=6.759619958816485E-4]:1.039759783966E1)[&rate=4.1581162496061406E-4]:8.179943095316E0,15[&rate=7.860691520011469E-4]:1.857754093497E1)[&rate=8.367428394828276E-4]:9.312108690729E1,(14[&rate=0.0011073784503783308]:4.283943082598E1,24[&rate=0.0011073784503783308]:4.283943082598E1)[&rate=8.56496658847231E-4]:6.885919701629E1)[&rate=0.0014000459437884432]:1.710994810625E1,((((12[&rate=7.713252958882316E-4]:7.380014879164E1,((16[&rate=5.939985148704459E-4]:4.05076197524E1,((22[&rate=6.970000490024071E-4]:4.096207031646E0,21[&rate=6.863049142318677E-4]:4.096207031646E0)[&rate=4.913621150256415E-4]:6.751091746551E0,20[&rate=7.080875572618298E-4]:1.08472987782E1)[&rate=6.759619958816485E-4]:2.966032097421E1)[&rate=0.0012004708896018903]:3.097245531099E1,(((((4[&rate=6.759619958816485E-4]:2.665395458276E0,3[&rate=4.339493665390688E-4]:2.665395458276E0)[&rate=4.42616783617283E-4]:4.322731695401E-1,2[&rate=6.467140853789835E-4]:3.097668627816E0)[&rate=5.302187050194217E-4]:1.11257888257E1,5[&rate=2.4851141585971177E-4]:1.422345745351E1)[&rate=7.196136009553508E-4]:1.404664474952E0,((7[&rate=7.080875572618298E-4]:1.088536563893E1,6[&rate=6.284275279269907E-4]:1.088536563893E1)[&rate=5.775858132059484E-4]:8.084332546282E-1,1[&rate=4.675158235592779E-4]:1.169379889356E1)[&rate=5.695288101655564E-4]:3.934323034905E0)[&rate=5.695288101655564E-4]:5.243492412393E1,((30[&rate=7.860691520011469E-4]:5.233483004036E1,26[&rate=4.991784437569117E-4]:5.233483004036E1)[&rate=6.467140853789835E-4]:8.373472929551E0,32[&rate=4.339493665390688E-4]:6.070830296991E1)[&rate=4.062215493377317E-4]:7.35474308248E0)[&rate=4.675158235592779E-4]:3.417029011006E0)[&rate=7.713252958882316E-4]:2.320073728243E0)[&rate=5.147144393905096E-4]:1.733687291754E0,25[&rate=8.782149957264873E-4]:7.553383608339E1)[&rate=3.1419014849046835E-4]:1.233248395423E0,((((33[&rate=7.860691520011469E-4]:5.69995734868E1,13[&rate=4.675158235592779E-4]:5.69995734868E1)[&rate=4.062215493377317E-4]:1.312753858307E1,(11[&rate=4.1581162496061406E-4]:1.32272923462E1,29[&rate=6.659360729879755E-4]:1.32272923462E1)[&rate=6.023821773396867E-4]:5.689981972367E1)[&rate=5.775858132059484E-4]:2.197517846045E0,(19[&rate=4.339493665390688E-4]:1.978938956257E1,18[&rate=5.857378277038243E-4]:1.978938956257E1)[&rate=3.4829290701487536E-4]:5.253524035335E1)[&rate=7.442045428766068E-4]:2.718969063263E0,((10[&rate=4.834919730499928E-4]:2.351242001546E1,31[&rate=2.898257698484427E-4]:2.351242001546E1)[&rate=4.1581162496061406E-4]:5.060892926078E1,23[&rate=4.062215493377317E-4]:7.412134927624E1)[&rate=5.147144393905096E-4]:9.222497029401E-1)[&rate=4.991784437569117E-4]:1.723485499639E0)[&rate=5.615536705447738E-4]:3.547262302409E0,(17[&rate=7.316317098152575E-4]:7.021975670511E1,(27[&rate=6.659360729879755E-4]:3.037929369254E1,28[&rate=9.023966270115289E-4]:3.037929369254E1)[&rate=7.080875572618298E-4]:3.984046301257E1)[&rate=7.860691520011469E-4]:1.009459007612E1)[&rate=8.367428394828276E-4]:4.849422916729E1); +tree STATE_1360000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55154.88167364076,EEF_ucld_branchRates=-266.168517335019,lnP=-55154.88167364076,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.249697977191661E-4]:8.617535287321E0,9[&rate=5.962221775508343E-4]:8.617535287321E0)[&rate=6.323250083025315E-4]:6.594016962682E0,15[&rate=4.483645700286655E-4]:1.521155225E1)[&rate=9.659157961857334E-4]:1.036750746772E2,(14[&rate=8.923805832410555E-4]:5.116773338607E1,24[&rate=8.358129358829408E-4]:5.116773338607E1)[&rate=0.0011970974087677408]:6.771889354118E1)[&rate=0.0011970974087677408]:1.049638282817E1,((((((33[&rate=6.811917639589017E-4]:6.123199561035E1,13[&rate=4.5775672699555834E-4]:6.123199561035E1)[&rate=6.050669970137756E-4]:8.217802063719E0,(11[&rate=7.368173054474015E-4]:1.250851779352E1,29[&rate=8.193867408230375E-4]:1.250851779352E1)[&rate=7.135209300822881E-4]:5.694127988055E1)[&rate=8.923805832410555E-4]:3.206404678396E0,(19[&rate=7.618961617515154E-4]:1.262904358934E1,18[&rate=7.024310218137768E-4]:1.262904358934E1)[&rate=4.2873971161581557E-4]:6.002715876312E1)[&rate=3.1960556518467476E-4]:1.97227434832E0,((10[&rate=4.847865958186933E-4]:2.626800645721E1,31[&rate=4.847865958186933E-4]:2.626800645721E1)[&rate=5.531564829493839E-4]:4.660313408704E1,23[&rate=7.491087310993427E-4]:7.287114054425E1)[&rate=5.021668478165981E-4]:1.757336156533E0)[&rate=7.249697977191661E-4]:1.693723493739E0,((12[&rate=6.231028862706879E-4]:7.38041511601E1,((16[&rate=3.1960556518467476E-4]:4.268826258471E1,((22[&rate=8.358129358829408E-4]:3.515189693597E0,21[&rate=5.021668478165981E-4]:3.515189693597E0)[&rate=3.560629818671987E-4]:7.393855590419E0,20[&rate=5.788058702297365E-4]:1.090904528402E1)[&rate=8.038933127879326E-4]:3.177921730069E1)[&rate=0.0013027988855209896]:2.976909360922E1,(((((4[&rate=5.36212713292376E-4]:2.654629499238E0,3[&rate=4.1837992306850876E-4]:2.654629499238E0)[&rate=6.610143635178826E-4]:2.775094163091E-1,2[&rate=0.0011970974087677408]:2.932138915547E0)[&rate=6.709832846391024E-4]:9.836679477481E0,5[&rate=4.1837992306850876E-4]:1.276881839303E1)[&rate=7.618961617515154E-4]:3.10690510018E0,((7[&rate=4.5775672699555834E-4]:1.117079812895E1,6[&rate=4.3871100716385734E-4]:1.117079812895E1)[&rate=8.923805832410555E-4]:1.138911501921E0,1[&rate=6.417054049917538E-4]:1.230970963087E1)[&rate=6.050669970137756E-4]:3.566013862337E0)[&rate=5.36212713292376E-4]:5.382071245E1,((30[&rate=8.358129358829408E-4]:4.939880215339E1,26[&rate=8.358129358829408E-4]:4.939880215339E1)[&rate=4.2873971161581557E-4]:1.299015921451E1,32[&rate=2.936746401631451E-4]:6.23889613679E1)[&rate=4.847865958186933E-4]:7.307474575308E0)[&rate=5.107389328500367E-4]:2.760920250723E0)[&rate=7.618961617515154E-4]:1.346794966167E0)[&rate=4.483645700286655E-4]:9.239980541779E-1,25[&rate=9.388001860612367E-4]:7.472814921427E1)[&rate=2.499490231120848E-4]:1.594050980246E0)[&rate=4.3871100716385734E-4]:6.648884236383E0,(17[&rate=7.491087310993427E-4]:7.729445779024E1,(27[&rate=5.36212713292376E-4]:4.0810378373E1,28[&rate=7.024310218137768E-4]:4.0810378373E1)[&rate=5.962221775508343E-4]:3.648407941724E1)[&rate=7.135209300822881E-4]:5.676626640663E0)[&rate=7.892111646861885E-4]:4.641192532452E1); +tree STATE_1370000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55161.72593721111,EEF_ucld_branchRates=-266.168517335019,lnP=-55161.72593721111,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.075498942296498E-4]:9.499997955933E0,9[&rate=4.777560469269576E-4]:9.499997955933E0)[&rate=5.314940929565066E-4]:1.034031043582E1,15[&rate=5.492657550090859E-4]:1.984030839175E1)[&rate=7.070917474507502E-4]:9.06702569276E1,(14[&rate=0.0012423700575887862]:4.646972515889E1,24[&rate=7.997612636474515E-4]:4.646972515889E1)[&rate=0.0012423700575887862]:6.404084016046E1)[&rate=7.437375394134466E-4]:1.74070402285E1,((((((11[&rate=8.88821328046344E-4]:1.57574856806E1,29[&rate=9.608465576299054E-4]:1.57574856806E1)[&rate=7.070917474507502E-4]:5.783233421912E1,(33[&rate=9.106902406142049E-4]:5.756480516057E1,13[&rate=4.08851024340255E-4]:5.756480516057E1)[&rate=3.075498942296498E-4]:1.602501473914E1)[&rate=7.705263813180125E-4]:6.114017274561E-1,(19[&rate=5.048363747619781E-4]:1.332777837342E1,18[&rate=7.568606362520217E-4]:1.332777837342E1)[&rate=4.1956173764178906E-4]:6.087344325376E1)[&rate=4.1956173764178906E-4]:1.860083352401E0,((10[&rate=6.327021259429665E-4]:2.828940835231E1,31[&rate=7.568606362520217E-4]:2.828940835231E1)[&rate=4.685359164666626E-4]:4.602310366972E1,23[&rate=4.958828004719774E-4]:7.431251202203E1)[&rate=4.496395224965875E-4]:1.748792957545E0)[&rate=6.7366725652099E-4]:1.129565972212E0,((12[&rate=7.848007931243338E-4]:7.324052145657E1,((16[&rate=5.403694516066005E-4]:4.225543650921E1,((22[&rate=6.845077969393678E-4]:4.55103022196E0,21[&rate=3.4475669517703447E-4]:4.55103022196E0)[&rate=7.188993911109792E-4]:4.452458936007E0,20[&rate=8.88821328046344E-4]:9.003489157967E0)[&rate=7.070917474507502E-4]:3.325194735125E1)[&rate=9.902111403179484E-4]:2.899689458244E1,(((((4[&rate=6.03903107226097E-4]:2.658467615532E0,3[&rate=4.591746835097254E-4]:2.658467615532E0)[&rate=7.568606362520217E-4]:4.312814910474E-1,2[&rate=4.2988480108298234E-4]:3.08974910658E0)[&rate=4.958828004719774E-4]:1.021984137943E1,5[&rate=3.277660969959996E-4]:1.330959048601E1)[&rate=8.321251008112734E-4]:2.200936733566E0,(1[&rate=4.3989172715697524E-4]:1.112175108672E1,(6[&rate=5.945740391571921E-4]:1.050311365094E1,7[&rate=4.2988480108298234E-4]:1.050311365094E1)[&rate=3.9766055960902637E-4]:6.186374357867E-1)[&rate=4.777560469269576E-4]:4.38877613285E0)[&rate=5.314940929565066E-4]:5.483256969557E1,((30[&rate=6.133565372713593E-4]:5.143904726406E1,26[&rate=5.492657550090859E-4]:5.143904726406E1)[&rate=8.497713405707449E-4]:8.101793263892E0,32[&rate=2.8123200507937206E-4]:5.954084052795E1)[&rate=7.070917474507502E-4]:1.080225638719E1)[&rate=5.945740391571921E-4]:9.092341765113E-1)[&rate=8.497713405707449E-4]:1.988190364919E0)[&rate=8.321251008112734E-4]:1.652694864405E0,25[&rate=6.7366725652099E-4]:7.489321632097E1)[&rate=7.705263813180125E-4]:2.297654630813E0)[&rate=0.0012423700575887862]:5.556737538729E0,(17[&rate=9.106902406142049E-4]:7.03260697609E1,(27[&rate=3.9766055960902637E-4]:3.13943760786E1,28[&rate=6.327021259429665E-4]:3.13943760786E1)[&rate=7.997612636474515E-4]:3.893169368229E1)[&rate=6.03903107226097E-4]:1.242153872962E1)[&rate=0.0012423700575887862]:4.516999705734E1); +tree STATE_1380000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.6504488446,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.6504488446,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.065068700928776E-4]:8.752977697569E0,9[&rate=4.4053117052859377E-4]:8.752977697569E0)[&rate=3.8386815118208637E-4]:1.017225215594E1,15[&rate=3.065068700928776E-4]:1.892522985351E1)[&rate=7.707524343753133E-4]:8.042421442187E1,(14[&rate=0.001213608575632998]:4.330663727872E1,24[&rate=6.19001412394701E-4]:4.330663727872E1)[&rate=8.42292645116606E-4]:5.604280699666E1)[&rate=7.707524343753133E-4]:2.476756898847E1,((((((11[&rate=2.3528611030851858E-4]:2.342262057857E1,29[&rate=6.949224458340483E-4]:2.342262057857E1)[&rate=6.949224458340483E-4]:5.020595297221E1,(33[&rate=9.35474630888023E-4]:6.082180136191E1,13[&rate=2.1980612188580873E-4]:6.082180136191E1)[&rate=7.500873720743129E-4]:1.280677218887E1)[&rate=4.901532317545468E-4]:7.583160975867E-1,(19[&rate=7.123139970498976E-4]:1.412312675036E1,18[&rate=8.165923329199221E-4]:1.412312675036E1)[&rate=4.901532317545468E-4]:6.026376289801E1)[&rate=5.799249596278965E-4]:1.201420800681E0,((10[&rate=6.19001412394701E-4]:2.441519776634E1,31[&rate=7.123139970498976E-4]:2.441519776634E1)[&rate=3.8386815118208637E-4]:5.078597543386E1,23[&rate=4.2144550867881673E-4]:7.52011732002E1)[&rate=3.6509292093791314E-4]:3.871372488554E-1)[&rate=2.960169814714622E-4]:1.808007068212E0,((12[&rate=7.707524343753133E-4]:7.495669910548E1,((16[&rate=4.4053117052859377E-4]:3.632162654942E1,((22[&rate=4.3094989632617086E-4]:2.723210255167E0,21[&rate=4.5020525946000255E-4]:2.723210255167E0)[&rate=6.783767640629183E-4]:5.917951151987E0,20[&rate=5.005376999618051E-4]:8.641161407154E0)[&rate=0.0013222408139842972]:2.768046514226E1)[&rate=9.35474630888023E-4]:3.634348867437E1,(((((4[&rate=3.2667291100247053E-4]:2.128061481219E0,3[&rate=3.5563669570859186E-4]:2.128061481219E0)[&rate=5.329440609920201E-4]:3.500349396599E-1,2[&rate=2.8515855554952103E-4]:2.478096420879E0)[&rate=3.6509292093791314E-4]:1.123046474401E1,5[&rate=5.005376999618051E-4]:1.370856116489E1)[&rate=6.625852384498579E-4]:2.702755400786E0,(6[&rate=5.329440609920201E-4]:1.17650838733E1,(1[&rate=6.19001412394701E-4]:9.469917920107E0,7[&rate=1.788506770495294E-4]:9.469917920107E0)[&rate=2.8515855554952103E-4]:2.295165953193E0)[&rate=7.928431146915213E-4]:4.646232692378E0)[&rate=3.932307364119982E-4]:5.561294850316E1,((30[&rate=6.783767640629183E-4]:5.388598379287E1,26[&rate=5.111174717027264E-4]:5.388598379287E1)[&rate=6.625852384498579E-4]:1.041760635456E1,32[&rate=2.8515855554952103E-4]:6.430359014744E1)[&rate=6.19001412394701E-4]:7.720674921402E0)[&rate=3.6509292093791314E-4]:6.408501549488E-1)[&rate=6.19001412394701E-4]:2.291583881697E0)[&rate=1.788506770495294E-4]:1.35084041488E0,25[&rate=6.055385233629798E-4]:7.630753952036E1)[&rate=3.3645823436461315E-4]:1.088777996899E0)[&rate=0.0013222408139842972]:3.115695447977E0,(17[&rate=8.703184839426816E-4]:6.937616115495E1,(27[&rate=1.788506770495294E-4]:3.472162681509E1,28[&rate=8.165923329199221E-4]:3.472162681509E1)[&rate=5.799249596278965E-4]:3.465453433986E1)[&rate=3.16705358931776E-4]:1.113585181029E1)[&rate=0.0013222408139842972]:4.360500029861E1); +tree STATE_1390000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55126.76398413293,EEF_ucld_branchRates=-266.168517335019,lnP=-55126.76398413293,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.753680568889684E-4]:7.858405734945E0,9[&rate=8.516375335182313E-4]:7.858405734945E0)[&rate=5.478517198306347E-4]:8.554521422425E0,15[&rate=6.112264434133929E-4]:1.641292715737E1)[&rate=8.119131396873995E-4]:9.065112668216E1,(14[&rate=0.0012810625076170876]:4.170777599229E1,24[&rate=7.762560221783427E-4]:4.170777599229E1)[&rate=0.0012810625076170876]:6.535627784724E1)[&rate=8.971337723704443E-4]:1.942577600451E1,((((((11[&rate=4.770249485044845E-4]:1.989826043279E1,29[&rate=6.02295069833516E-4]:1.989826043279E1)[&rate=7.877670453876485E-4]:5.061548952531E1,(33[&rate=8.119131396873995E-4]:6.075643073145E1,13[&rate=3.9193294264194394E-4]:6.075643073145E1)[&rate=6.291184222040986E-4]:9.757319226653E0)[&rate=7.03226211741024E-4]:1.377076449703E0,(19[&rate=7.650707262133881E-4]:1.273699869083E1,18[&rate=0.0012105851690240635]:1.273699869083E1)[&rate=4.770249485044845E-4]:5.915382771698E1)[&rate=3.4206191354322257E-4]:3.398579637754E0,((10[&rate=8.246342526899382E-4]:1.977345183244E1,31[&rate=8.971337723704443E-4]:1.977345183244E1)[&rate=5.571245852143261E-4]:5.370015632853E1,23[&rate=3.4206191354322257E-4]:7.347360816097E1)[&rate=6.840816288693066E-4]:1.81579788459E0)[&rate=4.987767399429767E-4]:1.603451294238E0,((12[&rate=7.331681994384833E-4]:7.499847439311E1,((16[&rate=4.531144001203039E-4]:3.020043852391E1,((22[&rate=8.971337723704443E-4]:2.076149905965E0,21[&rate=8.246342526899382E-4]:2.076149905965E0)[&rate=9.512637010068684E-4]:5.645616854511E0,20[&rate=4.987767399429767E-4]:7.721766760476E0)[&rate=0.0012810625076170876]:2.247867176344E1)[&rate=4.770249485044845E-4]:4.348388622681E1,(((((4[&rate=7.877670453876485E-4]:1.656853159756E0,2[&rate=8.811839713007434E-4]:1.656853159756E0)[&rate=5.384439833987434E-4]:8.466007322695E-1,3[&rate=8.119131396873995E-4]:2.503453892026E0)[&rate=0.0010194802074486018]:1.220289372667E1,5[&rate=4.0994026115434E-4]:1.47063476187E1)[&rate=4.6540207857661333E-4]:2.661259554805E0,(1[&rate=4.987767399429767E-4]:1.204639149737E1,(6[&rate=9.720389841955517E-4]:9.640213110594E0,7[&rate=5.190982088454859E-4]:9.640213110594E0)[&rate=6.02295069833516E-4]:2.406178386774E0)[&rate=9.320047976716845E-4]:5.321215676133E0)[&rate=7.650707262133881E-4]:5.528566329665E1,((30[&rate=7.130250124483001E-4]:5.563579333722E1,26[&rate=5.753680568889684E-4]:5.563579333722E1)[&rate=8.660522372020216E-4]:9.973289110392E0,32[&rate=3.4206191354322257E-4]:6.560908244761E1)[&rate=6.74702108215824E-4]:7.044188022539E0)[&rate=8.516375335182313E-4]:1.031054280572E0)[&rate=5.478517198306347E-4]:1.314149642383E0)[&rate=6.65429962947757E-4]:1.151827941771E0,25[&rate=6.291184222040986E-4]:7.615030233488E1)[&rate=5.662889199190407E-4]:7.425550049205E-1)[&rate=9.320047976716845E-4]:3.036139094536E0,(17[&rate=6.65429962947757E-4]:6.633629727939E1,(27[&rate=7.650707262133881E-4]:2.739042686163E1,28[&rate=9.512637010068684E-4]:2.739042686163E1)[&rate=6.74702108215824E-4]:3.894587041776E1)[&rate=7.541794849243332E-4]:1.359269915494E1)[&rate=0.0010194802074486018]:4.65608334097E1); +tree STATE_1400000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55122.339776435816,EEF_ucld_branchRates=-266.168517335019,lnP=-55122.339776435816,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=9.24802706337758E-4]:8.19122985896E0,9[&rate=0.0010012943675245408]:8.19122985896E0)[&rate=2.7079148725401203E-4]:8.870509787253E0,15[&rate=3.8570630280822965E-4]:1.706173964621E1)[&rate=7.029752663799366E-4]:9.316076750626E1,(14[&rate=9.60940218416194E-4]:4.721250295053E1,24[&rate=8.6216056920456E-4]:4.721250295053E1)[&rate=0.001046986033400564]:6.301000420193E1)[&rate=3.2487633079357367E-4]:1.415593417696E1,((((((11[&rate=3.554382209240014E-4]:2.428863701632E1,29[&rate=3.756098570941804E-4]:2.428863701632E1)[&rate=7.029752663799366E-4]:4.593828997375E1,(33[&rate=6.51349561298062E-4]:6.17822271703E1,13[&rate=3.0394503868116875E-4]:6.17822271703E1)[&rate=3.0394503868116875E-4]:8.444699819767E0)[&rate=6.51349561298062E-4]:2.248199553508E0,(19[&rate=8.6216056920456E-4]:1.499911457105E1,18[&rate=5.778198061725356E-4]:1.499911457105E1)[&rate=2.7079148725401203E-4]:5.747601197252E1)[&rate=4.915653780036189E-4]:4.452608163301E0,((10[&rate=2.4657397118491644E-4]:2.143599897995E1,31[&rate=7.417823514505076E-4]:2.143599897995E1)[&rate=4.162772297269718E-4]:5.530133199781E1,23[&rate=5.267373600583946E-4]:7.673733097775E1)[&rate=5.147574702712879E-4]:1.904037291223E-1)[&rate=7.628385890976265E-4]:4.228278682599E0,((12[&rate=7.85195359250154E-4]:7.820570797916E1,((((((4[&rate=4.2662254153311813E-4]:1.535204764547E0,2[&rate=6.849837230565679E-4]:1.535204764547E0)[&rate=1.8501886210531914E-4]:1.207573350445E0,3[&rate=2.1914588543100658E-4]:2.742778114992E0)[&rate=6.20355986591576E-4]:9.999934999491E0,5[&rate=3.0394503868116875E-4]:1.274271311448E1)[&rate=5.147574702712879E-4]:2.504259395869E0,(1[&rate=2.821632248964743E-4]:1.124712564804E1,(6[&rate=7.85195359250154E-4]:1.002553648333E1,7[&rate=1.6204207791489274E-4]:1.002553648333E1)[&rate=0.0014654829668484938]:1.221589164709E0)[&rate=4.060213528469313E-4]:3.99984686231E0)[&rate=3.756098570941804E-4]:5.962765726298E1,((30[&rate=5.267373600583946E-4]:5.503476500596E1,26[&rate=4.476516454598632E-4]:5.503476500596E1)[&rate=5.515888691392736E-4]:1.386450264554E1,32[&rate=4.476516454598632E-4]:6.88992676515E1)[&rate=1.6204207791489274E-4]:5.975362121832E0)[&rate=3.554382209240014E-4]:1.986363579171E0,(16[&rate=3.554382209240014E-4]:3.217125268481E1,((22[&rate=8.6216056920456E-4]:2.340009101654E0,21[&rate=6.20355986591576E-4]:2.340009101654E0)[&rate=4.915653780036189E-4]:5.953802565491E0,20[&rate=8.090398696356213E-4]:8.293811667145E0)[&rate=0.0016732813751218624]:2.387744101767E1)[&rate=6.678022942878458E-4]:4.468974066769E1)[&rate=7.029752663799366E-4]:1.344714626653E0)[&rate=1.6204207791489274E-4]:4.795909718951E-1,25[&rate=6.056986357829584E-4]:7.868529895105E1)[&rate=3.554382209240014E-4]:2.470714438421E0)[&rate=8.346006318734228E-4]:2.881559651375E0,(17[&rate=7.218713402748894E-4]:7.400592451596E1,(27[&rate=2.821632248964743E-4]:2.876464246144E1,28[&rate=0.0013335145638801924]:2.876464246144E1)[&rate=5.778198061725356E-4]:4.524128205452E1)[&rate=6.355547692971289E-4]:1.003164852488E1)[&rate=0.0016732813751218624]:4.034086828858E1); +tree STATE_1410000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55163.3935945383,EEF_ucld_branchRates=-266.168517335019,lnP=-55163.3935945383,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.5292014258110024E-4]:7.130621327583E0,9[&rate=5.398310647903867E-4]:7.130621327583E0)[&rate=3.851810934633781E-4]:6.893552370316E0,15[&rate=8.983637816324361E-4]:1.40241736979E1)[&rate=9.808262641340737E-4]:8.762432034037E1,(14[&rate=0.0010235593430365133]:4.207662040389E1,24[&rate=0.0013483044502161205]:4.207662040389E1)[&rate=9.282688252355821E-4]:5.957187363438E1)[&rate=8.587271569987223E-4]:1.816797971758E1,((((((11[&rate=7.916515747379436E-4]:2.172928251256E1,29[&rate=5.073876624633162E-4]:2.172928251256E1)[&rate=8.46590163237665E-4]:4.423816299637E1,(33[&rate=6.134507640268771E-4]:5.925791647362E1,13[&rate=7.251158238847533E-4]:5.925791647362E1)[&rate=6.220455464741775E-4]:6.709529035314E0)[&rate=6.987168982446417E-4]:1.749255299989E0,(19[&rate=9.445946506250665E-4]:1.141088412532E1,18[&rate=7.525768337650957E-4]:1.141088412532E1)[&rate=6.644947301137631E-4]:5.630581668361E1)[&rate=6.81511936042071E-4]:3.220727555077E0,((10[&rate=0.001193687248974803]:2.079693916843E1,31[&rate=9.282688252355821E-4]:2.079693916843E1)[&rate=6.390818124182727E-4]:4.924978873534E1,23[&rate=5.498034337926013E-4]:7.004672790377E1)[&rate=8.126367741410239E-4]:8.907004602334E-1)[&rate=5.871281474405948E-4]:2.50776107453E0,((12[&rate=7.620429738500196E-4]:6.959242779252E1,((((((4[&rate=8.126367741410239E-4]:2.085455664494E0,2[&rate=7.916515747379436E-4]:2.085455664494E0)[&rate=3.3634406799986076E-4]:8.399325698624E-1,3[&rate=5.871281474405948E-4]:2.925388234356E0)[&rate=6.475565056749473E-4]:9.03523675492E0,5[&rate=6.047804337187823E-4]:1.196062498928E1)[&rate=5.688903147893429E-4]:2.276765125325E0,(1[&rate=8.983637816324361E-4]:9.628405858725E0,(6[&rate=7.916515747379436E-4]:7.843382518316E0,7[&rate=5.073876624633162E-4]:7.843382518316E0)[&rate=7.251158238847533E-4]:1.785023340409E0)[&rate=8.845451963420485E-4]:4.608984255875E0)[&rate=4.8250870056834334E-4]:5.232035074262E1,((30[&rate=8.845451963420485E-4]:4.785737870199E1,26[&rate=6.390818124182727E-4]:4.785737870199E1)[&rate=9.282688252355821E-4]:7.742328068296E0,32[&rate=5.871281474405948E-4]:5.559970677028E1)[&rate=4.1358919677052914E-4]:1.095803408694E1)[&rate=8.46590163237665E-4]:1.076926893791E0,(16[&rate=5.187131058016917E-4]:2.736880309325E1,((22[&rate=0.001048365368438611]:2.726489911129E0,21[&rate=7.71696458904038E-4]:2.726489911129E0)[&rate=5.29493755873561E-4]:5.306784973402E0,20[&rate=5.871281474405948E-4]:8.033274884532E0)[&rate=0.0015440777223875378]:1.933552820872E1)[&rate=9.282688252355821E-4]:4.026586465776E1)[&rate=8.348928553535478E-4]:1.95776004151E0)[&rate=8.46590163237665E-4]:5.051758831679E-1,25[&rate=7.074236852227159E-4]:7.009760367569E1)[&rate=7.162185203371399E-4]:3.347585762839E0)[&rate=4.1358919677052914E-4]:4.497399052369E0,(17[&rate=6.900842002504263E-4]:6.848160962452E1,(27[&rate=5.29493755873561E-4]:2.734115266298E1,28[&rate=0.001048365368438611]:2.734115266298E1)[&rate=8.126367741410239E-4]:4.114045696153E1)[&rate=8.020016444966069E-4]:9.460978866385E0)[&rate=0.0015440777223875378]:4.187388526495E1); +tree STATE_1420000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55138.79717487136,EEF_ucld_branchRates=-266.168517335019,lnP=-55138.79717487136,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.431556883464891E-4]:8.802868894074E0,9[&rate=6.70455233908509E-4]:8.802868894074E0)[&rate=7.899079483443336E-4]:6.010368563483E0,15[&rate=4.759798861791526E-4]:1.481323745756E1)[&rate=7.65844168826397E-4]:9.814438167593E1,(14[&rate=0.0013214620555222938]:4.98504700114E1,24[&rate=0.0010675312113296567]:4.98504700114E1)[&rate=0.0012446512013837613]:6.310714912209E1)[&rate=4.976437192510981E-4]:1.470633590168E1,((((((11[&rate=8.290821376316145E-4]:1.748582532819E1,29[&rate=6.03892106974119E-4]:1.748582532819E1)[&rate=8.431556883464891E-4]:5.139199137604E1,(33[&rate=7.65844168826397E-4]:6.168052270403E1,13[&rate=4.8698784579766523E-4]:6.168052270403E1)[&rate=7.430692859521123E-4]:7.197294000204E0)[&rate=5.664647914866754E-4]:4.954867199756E-1,(19[&rate=7.543114148975648E-4]:1.11656049608E1,18[&rate=7.899079483443336E-4]:1.11656049608E1)[&rate=5.378361522666708E-4]:5.82076984634E1)[&rate=6.510664760678074E-4]:2.956210827959E0,((10[&rate=4.399364020784509E-4]:2.311607188263E1,31[&rate=4.2644971585100165E-4]:2.311607188263E1)[&rate=2.783198412502014E-4]:4.769953497209E1,23[&rate=4.645415414584643E-4]:7.081560685471E1)[&rate=5.280671237061158E-4]:1.51390739745E0)[&rate=5.280671237061158E-4]:3.962081972938E0,((12[&rate=0.0010377266400680458]:7.37789316306E1,((((((4[&rate=9.244818040026334E-4]:2.297948761694E0,3[&rate=3.7733128742950897E-4]:2.297948761694E0)[&rate=4.5257182584040054E-4]:3.902405967043E-1,2[&rate=7.213485219747466E-4]:2.688189358398E0)[&rate=5.378361522666708E-4]:7.984026202286E0,5[&rate=7.004879915411444E-4]:1.067221556068E1)[&rate=3.5539865731006335E-4]:2.532513442221E0,(1[&rate=5.474747025735147E-4]:9.191858856221E0,(6[&rate=5.852199000711016E-4]:8.507835985552E0,7[&rate=4.1184303752036735E-4]:8.507835985552E0)[&rate=6.70455233908509E-4]:6.84022870669E-1)[&rate=7.65844168826397E-4]:4.012870146684E0)[&rate=3.5539865731006335E-4]:5.698106701579E1,((30[&rate=7.899079483443336E-4]:4.78338386783E1,26[&rate=6.903279161530663E-4]:4.78338386783E1)[&rate=7.430692859521123E-4]:1.2776164575E1,32[&rate=6.226153163578962E-4]:6.061000325331E1)[&rate=5.758616679184684E-4]:9.575792765383E0)[&rate=5.945576838455782E-4]:5.363901846544E-1,(16[&rate=6.415137530348104E-4]:3.096979103831E1,((22[&rate=9.64389243533501E-4]:2.498131939007E0,21[&rate=8.893676942482614E-4]:2.498131939007E0)[&rate=0.0011012924215030087]:3.682759419915E0,20[&rate=9.244818040026334E-4]:6.180891358922E0)[&rate=0.001687432121652519]:2.478889967939E1)[&rate=8.893676942482614E-4]:3.975239516504E1)[&rate=8.893676942482614E-4]:3.056745427255E0)[&rate=5.080098258131665E-4]:1.612253542993E0,25[&rate=8.290821376316145E-4]:7.539118517359E1)[&rate=8.732135953292315E-4]:9.004110515088E-1)[&rate=8.290821376316145E-4]:2.433901519205E0,(17[&rate=9.244818040026334E-4]:6.614946927343E1,(27[&rate=5.280671237061158E-4]:2.586749853298E1,28[&rate=9.064126362264685E-4]:2.586749853298E1)[&rate=9.064126362264685E-4]:4.028197074045E1)[&rate=6.803228280785404E-4]:1.257602847087E1)[&rate=0.001687432121652519]:4.893845729086E1); +tree STATE_1430000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55133.600694501525,EEF_ucld_branchRates=-266.168517335019,lnP=-55133.600694501525,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.297317294209122E-4]:6.696908609474E0,9[&rate=6.13229223596863E-4]:6.696908609474E0)[&rate=3.4865904347525613E-4]:9.524894421299E0,15[&rate=3.110242343898536E-4]:1.622180303077E1)[&rate=6.473323724414366E-4]:9.510850828169E1,(14[&rate=0.0012766318523924382]:4.71097709767E1,24[&rate=8.282020964548449E-4]:4.71097709767E1)[&rate=9.858626085533263E-4]:6.422054033576E1)[&rate=6.13229223596863E-4]:6.217004436443E0,(((((((4[&rate=9.526233140142844E-4]:1.903070674221E0,2[&rate=5.612233167458301E-4]:1.903070674221E0)[&rate=5.612233167458301E-4]:1.052656958193E0,3[&rate=4.760055041376315E-4]:2.955727632414E0)[&rate=7.258457943464438E-4]:8.948028195741E0,5[&rate=3.244348253300856E-4]:1.190375582815E1)[&rate=3.810263305912398E-4]:2.527225365696E0,(1[&rate=2.797414720436004E-4]:9.404203999474E0,(6[&rate=3.4865904347525613E-4]:8.770327448283E0,7[&rate=5.712434676241928E-4]:8.770327448283E0)[&rate=6.024066172647704E-4]:6.338765511914E-1)[&rate=5.037478006676626E-4]:5.026777194377E0)[&rate=6.845152007474311E-4]:5.798416628372E1,((12[&rate=8.282020964548449E-4]:6.721164831747E1,(16[&rate=7.258457943464438E-4]:3.102261719076E1,((22[&rate=7.902547585901267E-4]:2.807853150029E0,21[&rate=2.3495948405539735E-4]:2.807853150029E0)[&rate=7.258457943464438E-4]:5.276954592525E0,20[&rate=7.902547585901267E-4]:8.084807742554E0)[&rate=0.0017165777367884637]:2.293780944821E1)[&rate=6.977665816242626E-4]:3.618903112671E1)[&rate=7.407960993152723E-4]:3.858806262331E0,((30[&rate=6.845152007474311E-4]:5.052149642274E1,26[&rate=4.1074184225312624E-4]:5.052149642274E1)[&rate=6.356652571668981E-4]:1.313560180522E1,32[&rate=2.3495948405539735E-4]:6.365709822796E1)[&rate=6.473323724414366E-4]:7.41335635184E0)[&rate=4.575913176648086E-4]:1.34469289777E0)[&rate=2.6016954914136686E-4]:2.985562719683E0,(25[&rate=7.407960993152723E-4]:7.454948757866E1,((((33[&rate=7.902547585901267E-4]:5.739504782319E1,13[&rate=3.4865904347525613E-4]:5.739504782319E1)[&rate=4.202957715167862E-4]:1.296283071257E1,(11[&rate=4.944625665496633E-4]:1.71442280954E1,29[&rate=4.575913176648086E-4]:1.71442280954E1)[&rate=5.416257423419832E-4]:5.321365044036E1)[&rate=4.1074184225312624E-4]:7.597966803079E-1,(19[&rate=8.491435965940325E-4]:1.153068591923E1,18[&rate=7.902547585901267E-4]:1.153068591923E1)[&rate=4.202957715167862E-4]:5.958698929684E1)[&rate=5.814346286318608E-4]:1.915907746852E0,((10[&rate=4.010382669618826E-4]:2.220676028084E1,31[&rate=6.593393222089163E-4]:2.220676028084E1)[&rate=3.810263305912398E-4]:5.033960885297E1,23[&rate=4.390772099068804E-4]:7.254636913381E1)[&rate=6.593393222089163E-4]:4.872138291033E-1)[&rate=0.0011873131682265602]:1.515904615739E0)[&rate=8.086362266734E-4]:8.512226185964E-1)[&rate=8.282020964548449E-4]:4.496828142512E0,(17[&rate=8.491435965940325E-4]:6.823938679106E1,(27[&rate=4.852203911524246E-4]:2.548502793971E1,28[&rate=0.0010678934202925385]:2.548502793971E1)[&rate=5.320151502616179E-4]:4.275435885134E1)[&rate=4.1074184225312624E-4]:1.165815154871E1)[&rate=0.0017165777367884637]:3.764977740914E1); +tree STATE_1440000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55156.437826486916,EEF_ucld_branchRates=-266.168517335019,lnP=-55156.437826486916,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.6763449412003465E-4]:9.55944449327E0,9[&rate=5.18232145699132E-4]:9.55944449327E0)[&rate=3.507462772851625E-4]:8.455445549075E0,15[&rate=3.6114190400920396E-4]:1.801489004235E1)[&rate=7.629408972720323E-4]:1.006167533833E2,(14[&rate=0.0011632794246071445]:5.470993996172E1,24[&rate=6.007610737943833E-4]:5.470993996172E1)[&rate=6.90491589613504E-4]:6.392170346394E1)[&rate=5.444605225538422E-4]:8.306581698488E0,((((((11[&rate=5.625487217730367E-4]:1.743186764712E1,29[&rate=4.927438635461598E-4]:1.743186764712E1)[&rate=7.036191683619339E-4]:5.450838448442E1,(33[&rate=6.318367885586309E-4]:6.010523865455E1,13[&rate=6.318367885586309E-4]:6.010523865455E1)[&rate=6.657796313894132E-4]:1.183501347699E1)[&rate=7.799781168569313E-4]:1.365971560606E0,(19[&rate=7.036191683619339E-4]:1.314591494521E1,18[&rate=7.981792323137271E-4]:1.314591494521E1)[&rate=4.080705352645022E-4]:6.016030874693E1)[&rate=3.281737873095204E-4]:3.579515806096E0,((10[&rate=5.909071918062615E-4]:2.042679258062E1,31[&rate=7.469063632355727E-4]:2.042679258062E1)[&rate=3.9915696812053606E-4]:5.351556229338E1,23[&rate=4.927438635461598E-4]:7.3942354874E1)[&rate=5.356121192832149E-4]:2.943384624238E0)[&rate=4.254683298520324E-4]:3.054790367743E0,(25[&rate=6.318367885586309E-4]:7.851503158961E1,(((((4[&rate=3.6114190400920396E-4]:2.569404019379E0,3[&rate=4.50887027457125E-4]:2.569404019379E0)[&rate=7.799781168569313E-4]:2.828729934984E-1,2[&rate=2.035863122060931E-4]:2.852277012877E0)[&rate=0.0010878906470657048]:1.069701669807E1,5[&rate=6.108507838744991E-4]:1.354929371095E1)[&rate=4.340086319345951E-4]:1.66672248829E0,(1[&rate=4.592640288257776E-4]:9.796700694433E0,(6[&rate=5.71820522201754E-4]:9.497608342193E0,7[&rate=3.7110585170321055E-4]:9.497608342193E0)[&rate=9.864106571784458E-4]:2.990923522397E-1)[&rate=5.26874109237536E-4]:5.419315504807E0)[&rate=6.318367885586309E-4]:5.975951197309E1,(((16[&rate=2.6763449412003465E-4]:2.979351973218E1,((22[&rate=4.16830965231426E-4]:3.394136052252E0,21[&rate=3.156228068495574E-4]:3.394136052252E0)[&rate=7.036191683619339E-4]:4.003428088577E0,20[&rate=3.0181507824726916E-4]:7.397564140829E0)[&rate=0.0015292467207216301]:2.239595559135E1)[&rate=8.177458859774683E-4]:3.90306553297E1,12[&rate=9.162049715588045E-4]:6.882417506188E1)[&rate=4.16830965231426E-4]:4.466706586657E0,((30[&rate=7.036191683619339E-4]:4.779890619754E1,26[&rate=6.007610737943833E-4]:4.779890619754E1)[&rate=7.036191683619339E-4]:1.26672178269E1,32[&rate=4.080705352645022E-4]:6.046612402443E1)[&rate=4.50887027457125E-4]:1.282475762411E1)[&rate=4.676227472974153E-4]:1.684646523785E0)[&rate=7.469063632355727E-4]:3.539503417286E0)[&rate=7.799781168569313E-4]:1.425498276367E0)[&rate=3.807218179432775E-4]:2.753343605122E0,(17[&rate=8.876322301543873E-4]:6.744065385962E1,(27[&rate=6.540911763938062E-4]:2.297006268792E1,28[&rate=8.177458859774683E-4]:2.297006268792E1)[&rate=5.534341973859948E-4]:4.447059117171E1)[&rate=4.080705352645022E-4]:1.525321961148E1)[&rate=0.0015292467207216301]:4.424435165304E1); +tree STATE_1450000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55149.05309882678,EEF_ucld_branchRates=-266.168517335019,lnP=-55149.05309882678,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.036856012933165E-4]:8.047622462807E0,9[&rate=7.274724279311377E-4]:8.047622462807E0)[&rate=3.7510030485838757E-4]:7.206445773086E0,15[&rate=3.461185576535476E-4]:1.525406823589E1)[&rate=8.263454258946099E-4]:9.681637875805E1,(14[&rate=0.001384288181343608]:5.325579813316E1,24[&rate=6.393674170843887E-4]:5.325579813316E1)[&rate=8.43375440023308E-4]:5.881464886078E1)[&rate=6.294078235284257E-4]:1.138556029405E1,(((((((11[&rate=6.704141562730126E-4]:1.747858804207E1,29[&rate=4.527084599049553E-4]:1.747858804207E1)[&rate=7.949100218371862E-4]:5.051371236513E1,(33[&rate=8.43375440023308E-4]:6.022354781552E1,13[&rate=6.196108332609429E-4]:6.022354781552E1)[&rate=3.083853664798067E-4]:7.76875259168E0)[&rate=0.0010793651134835384]:2.755089773435E0,(19[&rate=9.753464580252881E-4]:1.13574166349E1,18[&rate=5.270442686019902E-4]:1.13574166349E1)[&rate=4.4278963098648444E-4]:5.938997354573E1)[&rate=4.719429596590307E-4]:1.506133633603E0,((10[&rate=4.624131643987955E-4]:2.176016501524E1,31[&rate=7.66310810286895E-4]:2.176016501524E1)[&rate=5.089160961351947E-4]:4.96231479406E1,23[&rate=6.923052126733147E-4]:7.138331295584E1)[&rate=9.238997945944608E-4]:8.702108584006E-1)[&rate=5.179933556066841E-4]:2.596309983257E0,25[&rate=6.704141562730126E-4]:7.484983379749E1)[&rate=6.704141562730126E-4]:1.354016901687E0,((((((4[&rate=8.807521195303425E-4]:1.713959457185E0,2[&rate=7.153964039272457E-4]:1.713959457185E0)[&rate=4.997938623898211E-4]:6.11888131647E-1,3[&rate=5.451354016549759E-4]:2.325847588832E0)[&rate=7.802975093224094E-4]:1.033076655791E1,5[&rate=4.221106101323324E-4]:1.265661414674E1)[&rate=8.807521195303425E-4]:1.489706598586E0,(1[&rate=2.8172450740630985E-4]:8.93520912582E0,(6[&rate=8.614548667353845E-4]:8.241306195753E0,7[&rate=3.461185576535476E-4]:8.241306195753E0)[&rate=0.0010054800123234953]:6.939029300674E-1)[&rate=5.54207596802661E-4]:5.211111619505E0)[&rate=7.66310810286895E-4]:5.827324940911E1,(((30[&rate=6.923052126733147E-4]:4.839495889385E1,26[&rate=7.036856012933165E-4]:4.839495889385E1)[&rate=8.263454258946099E-4]:1.224710042492E1,32[&rate=3.878624151823843E-4]:6.064205931878E1)[&rate=4.997938623898211E-4]:1.035854103192E1,(16[&rate=3.998455141642531E-4]:3.071393986184E1,((22[&rate=7.802975093224094E-4]:2.805347582305E0,21[&rate=4.527084599049553E-4]:2.805347582305E0)[&rate=5.817119199353388E-4]:3.533728830489E0,20[&rate=4.8133111610875547E-4]:6.339076412794E0)[&rate=0.0016445428389015987]:2.437486344905E1)[&rate=6.099589931808033E-4]:4.028666048886E1)[&rate=9.238997945944608E-4]:1.418969803731E0)[&rate=2.8172450740630985E-4]:1.235834245285E0,12[&rate=6.004357197927499E-4]:7.365540439972E1)[&rate=3.998455141642531E-4]:2.548446299465E0)[&rate=6.704141562730126E-4]:2.709154082965E0,(17[&rate=5.910251415819451E-4]:6.951835005877E1,(27[&rate=4.624131643987955E-4]:2.054067739991E1,28[&rate=0.001126746594118679]:2.054067739991E1)[&rate=7.802975093224094E-4]:4.897767265886E1)[&rate=4.719429596590307E-4]:9.394654723377E0)[&rate=0.0016445428389015987]:4.454300250585E1); +tree STATE_1460000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55116.36038457488,EEF_ucld_branchRates=-266.168517335019,lnP=-55116.36038457488,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.069942096142939E-4]:6.650339422396E0,9[&rate=7.555000727304851E-4]:6.650339422396E0)[&rate=7.20625491922221E-4]:7.749894110379E0,15[&rate=7.555000727304851E-4]:1.440023353277E1)[&rate=6.274375314161377E-4]:1.063857280797E2,(14[&rate=9.01504489437422E-4]:4.891840760983E1,24[&rate=8.210357175097207E-4]:4.891840760983E1)[&rate=9.620543804149059E-4]:7.186755400269E1)[&rate=9.203560642007624E-4]:9.182656694362E0,((((12[&rate=8.069942096142939E-4]:7.272772629693E1,((16[&rate=4.912745157167657E-4]:3.168624255577E1,((22[&rate=8.356542888484572E-4]:2.62990747603E0,21[&rate=6.471352936354774E-4]:2.62990747603E0)[&rate=9.853953301749015E-4]:4.599903895404E0,20[&rate=3.0926472868732187E-4]:7.229811371434E0)[&rate=0.0017296264252199419]:2.445643118434E1)[&rate=0.0010388989166455619]:4.070391624939E1,(((((4[&rate=0.0011468708319990843]:1.773190771478E0,3[&rate=8.837381753066715E-4]:1.773190771478E0)[&rate=8.837381753066715E-4]:4.913183454797E-1,2[&rate=6.880449250855183E-4]:2.264509116958E0)[&rate=5.015476739437845E-4]:9.82459214162E0,5[&rate=3.0926472868732187E-4]:1.208910125858E1)[&rate=6.471352936354774E-4]:1.125600045102E0,(6[&rate=6.37237095455011E-4]:9.042670592982E0,(1[&rate=5.410700163464529E-4]:8.274079007887E0,7[&rate=3.780599013181032E-4]:8.274079007887E0)[&rate=3.780599013181032E-4]:7.685915850959E-1)[&rate=9.853953301749015E-4]:4.172030710697E0)[&rate=5.215588046167593E-4]:5.745998618373E1,((30[&rate=7.20625491922221E-4]:4.922870981906E1,26[&rate=5.410700163464529E-4]:4.922870981906E1)[&rate=0.0010702052195450662]:1.089303599161E1,32[&rate=4.8076916414170617E-4]:6.012174581068E1)[&rate=5.116305851224721E-4]:1.055294167673E1)[&rate=4.0891728259225294E-4]:1.715471317754E0)[&rate=7.435759380876085E-4]:3.375674917608E-1)[&rate=6.080716932423732E-4]:2.777904421321E0,25[&rate=6.672923996130411E-4]:7.550563071825E1)[&rate=7.555000727304851E-4]:2.699856068735E0,((((11[&rate=4.352179721075559E-4]:1.66505822036E1,29[&rate=8.509201550868989E-4]:1.66505822036E1)[&rate=7.555000727304851E-4]:5.396803356968E1,(33[&rate=9.203560642007624E-4]:6.087965745498E1,13[&rate=4.5884881517244943E-4]:6.087965745498E1)[&rate=9.01504489437422E-4]:9.738958318308E0)[&rate=5.602859033441192E-4]:1.845538078181E0,(19[&rate=0.001195967829835455]:9.717558396715E0,18[&rate=7.435759380876085E-4]:9.717558396715E0)[&rate=4.912745157167657E-4]:6.274659545475E1)[&rate=4.352179721075559E-4]:4.181593093109E0,((10[&rate=6.880449250855183E-4]:2.150927809634E1,31[&rate=5.410700163464529E-4]:2.150927809634E1)[&rate=3.377896488771046E-4]:5.473975757507E1,23[&rate=5.889134978649469E-4]:7.624903567141E1)[&rate=4.912745157167657E-4]:3.967112731633E-1)[&rate=7.095435638510153E-4]:1.55973984241E0)[&rate=4.352179721075559E-4]:3.904353559503E0,(17[&rate=8.356542888484572E-4]:7.032617028396E1,(27[&rate=5.015476739437845E-4]:2.391560797935E1,28[&rate=0.0013385474694984493]:2.391560797935E1)[&rate=6.986908057311223E-4]:4.641056230461E1)[&rate=5.698361493186029E-4]:1.178367006252E1)[&rate=0.0017296264252199419]:4.785877796039E1); +tree STATE_1470000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55171.10859955921,EEF_ucld_branchRates=-266.168517335019,lnP=-55171.10859955921,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.029834648675939E-4]:7.905655787429E0,9[&rate=6.830034347410179E-4]:7.905655787429E0)[&rate=4.894024652467166E-4]:5.333153541292E0,15[&rate=7.700617141881774E-4]:1.323880932872E1)[&rate=4.98443806859593E-4]:1.148333612364E2,(14[&rate=0.001047178509430801]:5.240629374215E1,24[&rate=9.107716371658064E-4]:5.240629374215E1)[&rate=5.160967473291032E-4]:7.566587682296E1)[&rate=6.830034347410179E-4]:1.466708868384E0,((((12[&rate=8.392093211686843E-4]:7.208315250956E1,((16[&rate=3.7737471027482066E-4]:3.179710908811E1,((22[&rate=8.095502272361342E-4]:2.682901470203E0,21[&rate=3.9220735236556917E-4]:2.682901470203E0)[&rate=5.160967473291032E-4]:4.179640512749E0,20[&rate=7.133446570940516E-4]:6.862541982952E0)[&rate=0.0015280166764625157]:2.493456710515E1)[&rate=5.842400727239504E-4]:3.867717998625E1,(((((4[&rate=8.239867864456607E-4]:1.558016477962E0,3[&rate=7.579412723624248E-4]:1.558016477962E0)[&rate=7.029834648675939E-4]:3.879476835955E-1,2[&rate=6.453943547296622E-4]:1.945964161558E0)[&rate=6.638598917456294E-4]:7.706287495968E0,5[&rate=5.247613874691316E-4]:9.652251657526E0)[&rate=6.638598917456294E-4]:2.522055880065E0,(1[&rate=4.98443806859593E-4]:7.856398140655E0,(6[&rate=8.239867864456607E-4]:7.047980200952E0,7[&rate=6.274696496580309E-4]:7.047980200952E0)[&rate=4.801755006822578E-4]:8.084179397025E-1)[&rate=4.894024652467166E-4]:4.317909396936E0)[&rate=4.801755006822578E-4]:5.614864538838E1,((30[&rate=8.909118224003037E-4]:4.561295276316E1,26[&rate=5.418772213813261E-4]:4.561295276316E1)[&rate=6.099631318655953E-4]:1.583218037892E1,32[&rate=7.958025559422418E-4]:6.144513314209E1)[&rate=6.099631318655953E-4]:6.877819783885E0)[&rate=6.013309593292333E-4]:2.151336148378E0)[&rate=7.700617141881774E-4]:1.608863435207E0)[&rate=4.98443806859593E-4]:1.973775145427E0,25[&rate=7.349460570053993E-4]:7.405692765499E1)[&rate=3.1372423703276444E-4]:1.412619337305E0,(((19[&rate=5.073324629160769E-4]:1.281026057876E1,18[&rate=8.392093211686843E-4]:1.281026057876E1)[&rate=3.4024115481442064E-4]:5.756192304526E1,((33[&rate=7.133446570940516E-4]:6.353617458716E1,13[&rate=4.404943325623336E-4]:6.353617458716E1)[&rate=7.133446570940516E-4]:5.175737992168E0,(11[&rate=6.830034347410179E-4]:1.56527749122E1,29[&rate=4.6100085363266996E-4]:1.56527749122E1)[&rate=5.503661216561566E-4]:5.305913766712E1)[&rate=3.1372423703276444E-4]:1.66027104469E0)[&rate=0.0010883376640127263]:1.735517316768E0,((10[&rate=8.392093211686843E-4]:2.231393602638E1,31[&rate=8.553354139359847E-4]:2.231393602638E1)[&rate=3.4024115481442064E-4]:4.926372679982E1,23[&rate=4.295446499087731E-4]:7.15776628262E1)[&rate=4.056122600478204E-4]:5.300381145819E-1)[&rate=5.672893661131775E-4]:3.361846051509E0)[&rate=9.826218193015558E-4]:3.978638611129E0,(17[&rate=9.107716371658064E-4]:7.202688853209E1,(27[&rate=6.733375989165151E-4]:1.970942630571E1,28[&rate=0.0011393881823691721]:1.970942630571E1)[&rate=7.029834648675939E-4]:5.231746222638E1)[&rate=9.826218193015558E-4]:7.421297071327E0)[&rate=0.0015280166764625157]:5.009069383007E1); +tree STATE_1480000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55153.505002114514,EEF_ucld_branchRates=-266.168517335019,lnP=-55153.505002114514,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.515942999335996E-4]:8.111191991398E0,9[&rate=7.770520388887798E-4]:8.111191991398E0)[&rate=8.515942999335996E-4]:6.538039156347E0,15[&rate=3.534183348802749E-4]:1.464923114775E1)[&rate=7.606654469060689E-4]:1.133485445431E2,(14[&rate=0.001526949220559974]:5.290932308987E1,24[&rate=8.122933564803687E-4]:5.290932308987E1)[&rate=8.122933564803687E-4]:7.508845260102E1)[&rate=4.794855941168897E-4]:5.182892098763E-1,(((((((16[&rate=6.497935777521456E-4]:2.995142424221E1,((22[&rate=6.377449448403703E-4]:2.437454830559E0,21[&rate=4.0910456482227834E-4]:2.437454830559E0)[&rate=3.1363868732344234E-4]:3.668100235245E0,20[&rate=9.211445188166211E-4]:6.105555065804E0)[&rate=0.0010476211491425985]:2.384586917641E1)[&rate=9.482019217525447E-4]:4.118448115319E1,((30[&rate=4.992815885182697E-4]:4.697026098456E1,26[&rate=6.879597186933498E-4]:4.697026098456E1)[&rate=0.0011980583876551733]:1.106656605598E1,32[&rate=6.748680929484716E-4]:5.803682704054E1)[&rate=4.39753010779517E-4]:1.309907835486E1)[&rate=0.0010897485718493732]:3.846593888389E0,((((4[&rate=0.0013726221813233068]:1.852818967921E0,3[&rate=4.39753010779517E-4]:1.852818967921E0)[&rate=2.6023799848845996E-4]:2.174421762805E-1,2[&rate=8.515942999335996E-4]:2.070261144201E0)[&rate=7.94227864890267E-4]:8.397772626827E0,5[&rate=3.409710174720992E-4]:1.046803377103E1)[&rate=4.0910456482227834E-4]:2.907412396608E0,(1[&rate=4.1945847826399714E-4]:8.833405872679E0,(6[&rate=4.497556242222686E-4]:7.971726228748E0,7[&rate=5.394614077587493E-4]:7.971726228748E0)[&rate=2.6023799848845996E-4]:8.616796439311E-1)[&rate=4.0910456482227834E-4]:4.542040294958E0)[&rate=4.1945847826399714E-4]:6.160705311615E1)[&rate=4.497556242222686E-4]:9.84953950183E-1,12[&rate=7.94227864890267E-4]:7.596745323397E1)[&rate=6.621575593933638E-4]:1.799239881719E0,25[&rate=8.313677686782239E-4]:7.776669311569E1)[&rate=1.9095587101538076E-4]:6.001175262771E-1,(((19[&rate=8.515942999335996E-4]:1.277350804947E1,18[&rate=6.377449448403703E-4]:1.277350804947E1)[&rate=4.296635768263673E-4]:5.825439335129E1,((11[&rate=6.879597186933498E-4]:1.686077720508E1,29[&rate=5.601117688794101E-4]:1.686077720508E1)[&rate=7.154448659093118E-4]:5.311191389026E1,(33[&rate=6.748680929484716E-4]:6.479791915683E1,13[&rate=2.981561273049191E-4]:6.479791915683E1)[&rate=3.9856304330363205E-4]:5.174771938515E0)[&rate=6.25983287935313E-4]:1.055210305419E0)[&rate=7.014709213987178E-4]:1.981227272667E0,((10[&rate=5.813157722595066E-4]:1.885130109391E1,31[&rate=6.879597186933498E-4]:1.885130109391E1)[&rate=2.339360368627344E-4]:5.278888614155E1,23[&rate=6.032190650988706E-4]:7.164018723546E1)[&rate=3.277897841538219E-4]:1.368941437968E0)[&rate=4.893733698110038E-4]:5.357681968538E0)[&rate=0.0011389170519645363]:1.660607744705E0,(17[&rate=6.497935777521456E-4]:7.351825088599E1,(27[&rate=5.601117688794101E-4]:2.314173504921E1,28[&rate=9.482019217525447E-4]:2.314173504921E1)[&rate=4.1945847826399714E-4]:5.037651583678E1)[&rate=5.394614077587493E-4]:6.509167500688E0)[&rate=0.0018706334989808712]:4.848864651409E1); +tree STATE_1490000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55134.90850656344,EEF_ucld_branchRates=-266.168517335019,lnP=-55134.90850656344,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.803197525194792E-4]:7.670870139057E0,9[&rate=7.225436496226685E-4]:7.670870139057E0)[&rate=0.0010434913940446146]:5.478477828768E0,15[&rate=4.829879279472217E-4]:1.314934796783E1)[&rate=7.692137150934966E-4]:9.803945529613E1,(14[&rate=9.51540214662105E-4]:4.898917536697E1,24[&rate=8.587800724997733E-4]:4.898917536697E1)[&rate=0.0010165694538464165]:6.219962789698E1)[&rate=7.692137150934966E-4]:1.457589729998E1,(((((((16[&rate=4.705269031732208E-4]:2.774064334456E1,((22[&rate=7.050145087358959E-4]:1.817443728987E0,21[&rate=7.79196700607247E-4]:1.817443728987E0)[&rate=7.40649943286784E-4]:3.579559795952E0,20[&rate=9.711709714378167E-4]:5.397003524939E0)[&rate=0.001216010265835883]:2.234363981963E1)[&rate=0.0013050175282145714]:4.061507782896E1,12[&rate=8.861076594136634E-4]:6.835572117352E1)[&rate=8.338939846309957E-4]:2.722238846159E0,((30[&rate=8.861076594136634E-4]:5.256812213146E1,26[&rate=8.221932251845324E-4]:5.256812213146E1)[&rate=7.499636492089143E-4]:1.17880019859E1,32[&rate=4.946068869755539E-4]:6.435612411736E1)[&rate=5.540983298266575E-4]:6.721835902317E0)[&rate=4.0377189890762437E-4]:2.151275468481E0,((((4[&rate=5.449921830210305E-4]:1.839615974367E0,3[&rate=5.449921830210305E-4]:1.839615974367E0)[&rate=6.219374233425796E-4]:3.828148072719E-1,2[&rate=5.803197525194792E-4]:2.222430781639E0)[&rate=5.449921830210305E-4]:7.83989340964E0,5[&rate=5.62999757278043E-4]:1.006232419128E1)[&rate=8.221932251845324E-4]:3.156253650843E0,(1[&rate=3.762330876884519E-4]:1.021712266504E1,(6[&rate=6.879365981673345E-4]:9.238221259391E0,7[&rate=5.717305161710644E-4]:9.238221259391E0)[&rate=7.40649943286784E-4]:9.789014056505E-1)[&rate=7.692137150934966E-4]:3.00145517708E0)[&rate=7.692137150934966E-4]:6.001065764604E1)[&rate=3.762330876884519E-4]:1.783492006334E0,25[&rate=8.587800724997733E-4]:7.50127274945E1)[&rate=6.219374233425796E-4]:9.319574946797E-1,(((19[&rate=8.861076594136634E-4]:1.291473496051E1,18[&rate=0.0011111486997196938]:1.291473496051E1)[&rate=4.569594466623367E-4]:5.624169919146E1,((11[&rate=6.54686096646994E-4]:1.762161214085E1,29[&rate=8.460693815712207E-4]:1.762161214085E1)[&rate=7.225436496226685E-4]:5.021712536242E1,(33[&rate=7.315161536544858E-4]:6.3476950061E1,13[&rate=3.762330876884519E-4]:6.3476950061E1)[&rate=6.629188033807829E-4]:4.361787442272E0)[&rate=7.692137150934966E-4]:1.317696648697E0)[&rate=5.540983298266575E-4]:3.617847096466E0,((10[&rate=5.803197525194792E-4]:2.111026288911E1,31[&rate=8.338939846309957E-4]:2.111026288911E1)[&rate=4.705269031732208E-4]:5.051481645551E1,23[&rate=6.54686096646994E-4]:7.162507934462E1)[&rate=5.356408773676935E-4]:1.149201903813E0)[&rate=7.692137150934966E-4]:3.170403740744E0)[&rate=6.054773409114629E-4]:6.905940729011E0,(17[&rate=9.009134248605781E-4]:7.744448815072E1,(27[&rate=0.0010165694538464165]:2.181584424899E1,28[&rate=9.334504852317562E-4]:2.181584424899E1)[&rate=5.62999757278043E-4]:5.562864390173E1)[&rate=6.795309520526933E-4]:5.40613756747E0)[&rate=0.0014930302801874373]:4.291407484575E1); +tree STATE_1500000 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.46360697245,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.46360697245,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.446836466286013E-4]:6.847005011038E0,9[&rate=7.680913290321429E-4]:6.847005011038E0)[&rate=4.0408403186051285E-4]:6.213330693469E0,15[&rate=4.7384431172545704E-4]:1.306033570451E1)[&rate=8.276467410290045E-4]:1.089781448725E2,(14[&rate=7.548605364788551E-4]:5.368764684886E1,24[&rate=9.799249383767206E-4]:5.368764684886E1)[&rate=6.638803953377745E-4]:6.835083372816E1)[&rate=5.355533893398452E-4]:7.831195420819E0,(((((((16[&rate=6.638803953377745E-4]:3.129974821245E1,((22[&rate=0.0013322373656497956]:2.243540442596E0,21[&rate=5.355533893398452E-4]:2.243540442596E0)[&rate=4.918316583704524E-4]:3.622613272603E0,20[&rate=8.115855891719223E-4]:5.866153715199E0)[&rate=0.0012213997607213643]:2.543359449725E1)[&rate=6.343187505415784E-4]:3.705039676488E1,((30[&rate=5.792688225291046E-4]:5.038153097054E1,26[&rate=6.343187505415784E-4]:5.038153097054E1)[&rate=5.529329529508692E-4]:1.228278522204E1,32[&rate=3.8003073034935294E-4]:6.266431619258E1)[&rate=7.06616099832495E-4]:5.685828784755E0)[&rate=4.8289583134780267E-4]:2.227875206046E0,12[&rate=9.034214575259854E-4]:7.057802018338E1)[&rate=4.646489810729433E-4]:9.837603121194E-1,((((4[&rate=5.181781873053845E-4]:2.215083813045E0,3[&rate=6.846917933154181E-4]:2.215083813045E0)[&rate=2.8866118367720307E-4]:7.378592742651E-1,2[&rate=2.8866118367720307E-4]:2.95294308731E0)[&rate=4.0408403186051285E-4]:9.090330541322E0,5[&rate=2.4463243565232384E-4]:1.204327362863E1)[&rate=9.034214575259854E-4]:1.664110565344E0,(1[&rate=6.955006259893495E-4]:1.10088373472E1,(6[&rate=6.955006259893495E-4]:9.613318361388E0,7[&rate=4.552772111102068E-4]:9.613318361388E0)[&rate=4.646489810729433E-4]:1.39551898581E0)[&rate=0.0010490009363456447]:2.698546846778E0)[&rate=4.646489810729433E-4]:5.785439630152E1)[&rate=8.446836466286013E-4]:1.720761369367E0,25[&rate=6.846917933154181E-4]:7.328254186486E1)[&rate=5.704357187662233E-4]:2.303913741032E0,(((19[&rate=6.538276869528335E-4]:1.391048157645E1,18[&rate=4.918316583704524E-4]:1.391048157645E1)[&rate=3.8003073034935294E-4]:5.866432497347E1,((11[&rate=7.819041502566531E-4]:1.363682508871E1,29[&rate=9.799249383767206E-4]:1.363682508871E1)[&rate=4.7384431172545704E-4]:5.678578129521E1,(33[&rate=5.971690249628539E-4]:6.581997205468E1,13[&rate=3.1485614069577276E-4]:6.581997205468E1)[&rate=6.248237200627262E-4]:4.602634329241E0)[&rate=7.819041502566531E-4]:2.152200165999E0)[&rate=3.8003073034935294E-4]:6.659345586109E-1,((10[&rate=7.548605364788551E-4]:2.196544882349E1,31[&rate=4.918316583704524E-4]:2.196544882349E1)[&rate=4.456904874664911E-4]:4.90924920762E1,23[&rate=4.552772111102068E-4]:7.105794089969E1)[&rate=8.115855891719223E-4]:2.18280020884E0)[&rate=7.963730269406455E-4]:2.345714497363E0)[&rate=6.538276869528335E-4]:3.388266231016E0,(17[&rate=6.638803953377745E-4]:7.122242000689E1,(27[&rate=8.628526426343849E-4]:2.122615094991E1,28[&rate=0.0010119318891762981]:2.122615094991E1)[&rate=7.06616099832495E-4]:4.999626905698E1)[&rate=6.955006259893495E-4]:7.752301830025E0)[&rate=0.0015720123698315309]:5.089495416093E1); +End; diff --git a/src/TEST/test.conf b/src/TEST/test.conf new file mode 100644 index 0000000..fedf63f --- /dev/null +++ b/src/TEST/test.conf @@ -0,0 +1,5 @@ +mrca = 9_4 taxon_9 taxon_4 +stochtime = 9_4 +stochnumber_any = 9_4 +stochnumber = 9_4 +ancstates = _all_ diff --git a/src/TEST/test.data.narrow b/src/TEST/test.data.narrow new file mode 100644 index 0000000..bf31dc3 --- /dev/null +++ b/src/TEST/test.data.narrow @@ -0,0 +1,11 @@ +10 2 +taxon_4 0 0 +taxon_5 0 0 +taxon_6 0 0 +taxon_3 1 1 +taxon_7 2 1 +taxon_8 2 2 +taxon_9 2 2 +taxon_10 2 2 +taxon_11 3 3 +taxon_12 3 3 diff --git a/src/TEST/test.fa b/src/TEST/test.fa new file mode 100644 index 0000000..ce823f0 --- /dev/null +++ b/src/TEST/test.fa @@ -0,0 +1,10 @@ +>TaxonA +AAATTTCCCTGTCCCTTTAA +>TaxonB +GCTCGAGGGGCCCCAAGACC +>TaxonC +ACGCTCCCCCTTAAAAATGA +>TaxonD +TCCTTGTTCAACTCCGGTGG +>TaxonE +TTACTATTCCCCCCCGCCGG diff --git a/src/TEST/test.fastq b/src/TEST/test.fastq new file mode 100644 index 0000000..3bad7cb --- /dev/null +++ b/src/TEST/test.fastq @@ -0,0 +1,4000 @@ +@D7DHSVN1:151:D12V0ACXX:8:1101:1426:1976 1:N:0:CGATGT +NACAACAAAAACTTTATTGAAATAGTTGCATGAAATTTCAGACGTCAAAATAGTCATCTGAAAATTTACTCTTGATCCATTTAAAGCTGTTCCTTATAGAA ++ +#1=DFFFFHHHHHJJJJJJHHIIIJIJJJJJJJJJJJJHHIIJJHIJIJJIJJGIIIJJJHIIJJJJJJJJJJJIEEHHGHHFEEFFFDEEEEEEDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:1657:1955 1:N:0:CGATGT +NGCATTTGTCCTTATACAGACTGAAGAGACCATTGGCATGGATCAAATCATATGTTCTTGGATATGTAGAAAATCCCTCACACCAATCATGATAAATGCCT ++ +#1=DFDFFHFHHHEIIGIIHIHBGGEIIDGGGHE@GHGGIGGEGHIIGIIIGHIHIHIHGI:BBFHIHIIIGID=)=CGCEHHDBDEECECCED@CDDAC@ +@D7DHSVN1:151:D12V0ACXX:8:1101:1585:1964 1:N:0:CGATGT +NTGGAAAAAAATAGTTCTTGGGTTTACTGAAGTTGATCATATAATCTTTAGAGTTCAGCGGCAGGAGGAGCATTTGGTGTACCCTCTGAAGTGCAAGGCGG ++ +#4=DBDFFGGHHHJFHIJJJJJFHJJJJJFGGHHIIGJJJJJFJJIJJJIIJJCGGHJJJJHHFD=AB(;2?CCA,:9<5:,>CC894+>A>A(:@@B<>> +@D7DHSVN1:151:D12V0ACXX:8:1101:1539:2000 1:N:0:CGATGT +NGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATATCGTATGCCGTCTTCTGCTTGAAAAAAACACCCAAGAGCTAGGCGACACGAGGATCTA ++ +#1:BDBDBDDDBDEDHHICFGGFFHI9AEE@@ECCC+CE92ACEF<@@AE>DDEE?@DEDEDEEEC@DADICDI7=BDDIIDDDICDDDCCDDDAAAAAA???AA8,5==AAAAD +@D7DHSVN1:151:D12V0ACXX:8:1101:2177:1964 1:N:0:CGATGT +NTCCAGTTTTTGATACCTCAACGACATGGCCATCACAATGTTCAACCAAAGAGAATAAGAAGAAAATTACAATCACAAGATGAGCTCCGTTGAGCCCCTTG ++ +#1=DDFFFHHHHHIIJJJJGIJJJJIJJJJJJJJGJJJJJIJJIIJJJIIJJJJJJJJJJJIJJHGGFHHFFFFFFEEDEEDDDDDDDDDDDDDDDDDDD@ +@D7DHSVN1:151:D12V0ACXX:8:1101:2295:1951 1:N:0:CGATGT +NAAAAGTCTGTGCCGCCCTTCAGAGCAAAACCCAATCAACCTAACAAGGTTCAAATGGTGGGTGCTGCTAATGGTTGCTACCTCCATTCTAAACTGTTTCT ++ +#1=DDFEFHHHHHJJJJJJJJJJJJIJJJJJJJJJJJJJJJJJJJJJJJGJJIIIJIJHIJHBEFFEEEEEEEDCABDDEDDDDDDDEEEDDDDDDCDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:2642:1999 1:N:0:CGATGT +NGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATG ++ +#1:BDFFFHHHHHJJJIJJJJJJJJJJIGIJJJJJJGIIGHIHGIIJIJIJJJIJJHHHHGFDBDDDDDDDDDBCCCD@BBBBDD9@BBDDDDDA>@ +@D7DHSVN1:151:D12V0ACXX:8:1101:2987:1988 1:N:0:CGATGT +NTTGAGTCCCACATCCCTTCCTTTGCCCACCTGAATGTATTCATGATGGGTAATGTTTCCCTGTCTTAAAGTTGAATTGAAACCTGGATATATATCTTCGC ++ +#1=DDDDFHGHHHHGIIIIGIJJJFHHGGHGICCDHIDFHIGDHHGIIHIGFHGHIIJIJJJIIEHIDCCFDGG@@CH:3CHEHFBDDCECEFFEED@@?# +@D7DHSVN1:151:D12V0ACXX:8:1101:3233:1928 1:N:0:CGATGT +NATGATTCAAAAATTGGATAGAGTTAAGGGGGAATGCCGCTGCTGATAGATCCCGCCCAGATCAAGAATAGTTGATTATATCCAGGAAAATTAAGAGTTCC ++ +#11AD1=:ADDDAEDDAB?FFAF:A;=AA;;5-=AA>-5,;5>>(5355>>?>?A############ +@D7DHSVN1:151:D12V0ACXX:8:1101:3186:1968 1:N:0:CGATGT +NTCCAGCAATACATCTTTTGCAGCAACAAGAGTGAACGTTTTGTTTGCATGAGTGGCAGGCGATAACCCGATTCCAGGTAACACTTTTCCATTTCCCAAGA ++ +#1=DDDDFFHHGFFHIJJIJJJJJIIJJIEHG1?EGIGBGGIEGEHIJ?;;;AC@:>A>A@CCCCC@;@DCDD:9?A +@D7DHSVN1:151:D12V0ACXX:8:1101:3407:1961 1:N:0:CGATGT +NTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGAGC ++ +#1=BDFFFHHHGHIIJJJIJJJJGIJJIIJJJJJJJIIJGIJJJJJJJIJJHHHHHHFFFFFFFEEEEEEDDDDD@CFFEDDDDDDDDDDDDDDCDDDCDC +@D7DHSVN1:151:D12V0ACXX:8:1101:3354:1981 1:N:0:CGATGT +NCAGGCCTCTTGCCCCCACACTCGACGTTACCGTTGATGGCGCTGATGGTAGGTCCGAAACCTTGGTTGACCACGCTATGAACGCTGCTCATCCAGTACCA ++ +#11AADD?DHDHHGIEF?CGHEEHB@@?BGG@@?D;FBGG@A;AH8@G>EHHH77?>9?>;;(-5:558(:>:?B9C>4:4:@ +@D7DHSVN1:151:D12V0ACXX:8:1101:3492:1987 1:N:0:CGATGT +NTCGACTTTAACATCTGTGGTGATGTTCTTGTTTGTGAACTTAGTGCTCACATCAGCGAGAAAGAACTCTCCCTTCTTTATTCCATTGGAAGTGATGGCAA ++ +#1=DFFFFHHHHHJJJJIJJFHIJJJJJJJJJJJIIIJJJJJJJIJJJIJIJJJJJJJJJJJJJJIJEIGHHHHHFFFFFFEEEFFEEDCDDCDDEDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:3620:1923 1:N:0:CGATGT +NAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACATCTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCAGGAATTTTAACCCGAT ++ +#4=DDFFFHHGHFJJIJIJJJJJJJJIJJJJIIJIIJJHHHFHFFDDDDDDDDDDDDCDBDDDDDDDDDDDDDDDDBDDDD<@?CD>ABDDDDEDCDDDDB +@D7DHSVN1:151:D12V0ACXX:8:1101:3698:1949 1:N:0:CGATGT +NGAAATTTTTGCCAGGACAACTAGCCGGGGCTTGGCCTATAATGCCATCAAAGAACGCCTGACTCACAACATCCCCGACCGAGACACCGCTACTCGGGGTG ++ +#1=DDFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJJIIJJJIJJJJJJJJJHHHHFFEDEEEDDDDDDDDDDDBDDDDDDDDDDDDDDDDDCDBBBD<< +@D7DHSVN1:151:D12V0ACXX:8:1101:3907:1950 1:N:0:CGATGT +NGTGAGACTAAAGCCATAGAGAAATATTCCTAGGCCTTAATTAGAGACCAAATCAAGGAGCTTCCATCATTTGCTTGCCTGGATTTCAGAACTACTATCCT ++ +#1:BDDFFHHGHHJIIJJJIJJIJJIJJIJJJIIJJIJJJJJJJJJIIJJJJJJJJIJJJJJJJJIJJGJJJGIJJHHHHHFBFFFEEDEEEDDCDDECDE +@D7DHSVN1:151:D12V0ACXX:8:1101:3953:1959 1:N:0:CGATGT +NGCCAAAGCACCTGCATTTGCATTGCTTCCATGAGACTGATCACCCGAGCTTGAAACGAAAATACCCTGCTGGCGGGCTCGTTGGAGCTCCTGCTCAAGTT ++ +#1=BDFFFHGHHHJJIJJJIJJIJJJJJJJJIFIJJICHIGIJJJIIHIJJJIJJCFGHGGJJHHHHHFFFEFDDDDBDDD9<<<399<@A3(:@@:@@A> +@D7DHSVN1:151:D12V0ACXX:8:1101:3806:1965 1:N:0:CGATGT +NAACATATGATAGAATACATTAGATCACATCATACCACTAAACTTATAACATTAGCATCTTATTGCACAACCAAAAGCAGCACTAATTTAGAGTTGATAAA ++ +#1=DFFFFHHHHHJJJJJJJJJJJJJJJJIIJJJJJJJJJJIJJIJJJJJJJIJJJJJJJJJJJJJJIJJJIIIJHIHHHHHFFFFFEEEEEEADDDDEDD +@D7DHSVN1:151:D12V0ACXX:8:1101:3909:1974 1:N:0:CGATGT +NTCCACTGGCCGACGCCTGGAGCGCGCAGGTGCCGAGGCACGCTGTGACAGCGCGCGCTGACTACCACAATCGCGAGGACAGCACTCCCGGAGACTGGGTT ++ +#1:ADDDDHHHFHIGGIGIFDEGGGGGIGBGDA@5:598?B?B?@:ADCC><BDBBDBB@@:>C +@D7DHSVN1:151:D12V0ACXX:8:1101:4066:1956 1:N:0:CGATGT +NCTAGGGCGACGCTAGGGCGACGCGTGAAGACCCGGGGTAGTAAACTACCCGGACGGGACTTCCCCCTTCAAAAATTAATTTAATATCATTGTGGGCCAAT ++ +#1=DDBDDHHHHHJJJIJIJJJJJJIGFHHFFFFDDDD3;?@CDCDDDDDDDDBDDDD;@BDDDDDDDDDDDDDDBCDDEEEDDDEEEEEEDCCDDDDDDA +@D7DHSVN1:151:D12V0ACXX:8:1101:4441:1928 1:N:0:CGATGT +NGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGC ++ +#1=DDFFFFFHHHJJJJJJJIJFIJIGJIJJIIIGIJJIJJHHHHHHFEFFFFEEDEEEDC?CDDBDDDDDDDDD@CDDDEECCCD?@CCDDDA>CCDCCC +@D7DHSVN1:151:D12V0ACXX:8:1101:4424:1942 1:N:0:CGATGT +NCGAGATTCTTTCCATCTTTTTCGATGGCATGTTTGAAAGCAGCTCCAAATCCAAGCCACACTGGAAGATGAAACCTTGTCTGAGTCCAAGCGAAAATCCA ++ +#1:BD7DDHHFHFHEIIIIIIIGHGHIHGGGHFGIHGCDEHIIIIHEHGIIGGIIIGGHIGIIHICHGIGHH>>E@BDEEECACCCACCCCBBBBBBCCCC +@D7DHSVN1:151:D12V0ACXX:8:1101:4623:1935 1:N:0:CGATGT +NTCATAAGGTGCCGGCGGCGTCCTAAAAGTAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCC ++ +#4=DFFFFHHHHHJJIJJIJIJJJJHHHHEHFFFFFFDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD@BDDEEDEDDDDDDDDDDDDB +@D7DHSVN1:151:D12V0ACXX:8:1101:4603:1977 1:N:0:CGATGT +NTCAAACTCTCACCATAGCCAAAAAACTAAACAATACCAATTATACAATAAGGTCTAGATTGATGATTCTGGCCCTAAAAGGGAGGAGGTGTCTTAAGTAC ++ +#1=DDFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJJJJJJIJJJJJJJ*BGGIIJJIJJIJJJJJJJIJFHHHFFFFFFDDDDDDDD@CC +@D7DHSVN1:151:D12V0ACXX:8:1101:5761:1985 1:N:0:CGATGT +NTCGCCGAGGGCACTGCTAGCAATAGAGTATAGTCTCAACTTATGGGGCTTTCCATTTTTGTCAATACCTTCAGGAATCACACCAACTGACTGCCCTTCCT ++ +#1:DDDDDHFGHFGHIIJGGGGFIGHHHBGHDHDBFGDHIJJIIAH@DGIJJJHEHGHHHGFFDFFFEC@>CC@CCBDCDDCCBBDDD9@>@:9??@CDAC +@D7DHSVN1:151:D12V0ACXX:8:1101:6067:1929 1:N:0:CGATGT +NGGGATTCCATCATTAGTGAGGTAAATAACAACCCTGGAGCTGGATGGAAGGCTGGCATGAACCATCAGTTCTCCAATTATACAATTGGCCAATTCAAGCG ++ +#1=DFFFFHHHHHJJIJHIHJJEHHHJJJJJJJJJIJJHJJJIJHJJJJJJIIJJJJJJJJJJJJJJJHHHHHHFFFFFFFEE@CEEDDDDDDDDDDEDD? +@D7DHSVN1:151:D12V0ACXX:8:1101:6174:1980 1:N:0:CGATGT +NTATAGCAAAGCATTAATCCTTTTTGTTGTGGCATCAATAGTTTCTTTGTCTCGTTTGGTACCAGTCTCAGTTACAAGTAGGCATTGGATAAGATCGCTTT ++ +#1=BDDDFHHFHFIJIIIGIJJGIHGIIGFEGHBHGEGIF@HGIGGJJDHIJIGDHIG7==AHIGHJIFIIDDEE>EA?;;@:@DAC:>ACC>CDCDB?B? +@D7DHSVN1:151:D12V0ACXX:8:1101:6066:1994 1:N:0:CGATGT +NGGGAATTCGCTGATGATAGATCTCGCCCAGTGTCCCCCTCCTTCCCCCGCCGCCTTCCGACCCGCGGAAGAATCCAATTTCAACTACCGGAGACTCATGC ++ +#1+4B?DDFFFFAFGBFD?############################################## +@D7DHSVN1:151:D12V0ACXX:8:1101:6454:1931 1:N:0:CGATGT +NCCTTTTTGTATCCATCAACCATCAACGGCATGGCCAGGGCACCTCTTATCGTTTTCCATCCAGTTCGTAACAAGGAAAGGAAGCCTTTCCATGTCAAAGC ++ +#4:BDFFFFHFHHIIIJJJJJIECHGHI@CCCDEDCECADC@3 +@D7DHSVN1:151:D12V0ACXX:8:1101:6486:1941 1:N:0:CGATGT +NGGGAAAAGGATTCGTTCGTCTAGCTATTGAGAAAGGCTGTCCTTTGGTTCCAGTTTTCTGCTTTGGCCAGTCGAGAGTCTACAACTGGTGGAAGCCTAGT ++ +#1=DDDFFHHGHHJJJJJJJJJJJJJJJIJIIJJJIJJJJGJJIGJJJGGHIGHBFCHF@DHIIJJIHGGGEHFEAA;@AABBA>AABDBBB3>:AA???B7?BBBB +@D7DHSVN1:151:D12V0ACXX:8:1101:6457:1990 1:N:0:CGATGT +NCACAACCTTTAACGTCAGGTTTATGAAGCGATATGAATGATGAGAGTAGAGTTGATTTTGGTGGTGGAAGCGCCTCTGGAATCGTTCCAACAGTTTGCTT ++ +#1=DFFFFHHHHHJJIJJJJEHIIJIJJJFIIJJJIGIGIIIIEHCH?DGHICHGGIJGJGIFHIAEHCFFBEDDBDDDDDCDDDBDDDEDDDB@CDCCDC +@D7DHSVN1:151:D12V0ACXX:8:1101:6510:1923 1:N:0:CGATGT +NCATCATCACTTCCACCAGAAATATAATCACCATTTTGGCCCAAGAAAGTAGCCTGCTTTATGTCAGTTCCCACATTACAGTGTCCAACATATCTCTGTTT ++ +#1=DDFFFHHGHHJJJJJJIJJIJJJJIIJJJJJJJJJJIJJJJJJJJJFHHIJJJJJJJJJJJJJJIJJIJJJHHHGHHFFFFFFEEEDEEEDEDEDCC@ +@D7DHSVN1:151:D12V0ACXX:8:1101:6738:1950 1:N:0:CGATGT +NGACGATAGCAATATTTGTAGGGACTGACCTCCATCCAATCACCTCTAGACCCTCTTGTGAAAATATACTTGCAACAACTTTTCTCGCTTCCTCTGCAAGT ++ +#1BDFFFFHHHHHJJJJJIJJJJJJJJJJJIJJJJJJIIJJJJJJJJJJJJJJJJJJIJJGGGIJJJJIIIJJHFHHFFFFFFEEEDDDDDDDDDCDD:@: +@D7DHSVN1:151:D12V0ACXX:8:1101:6546:1958 1:N:0:CGATGT +NTGACACTGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAAT ++ +#1:DDDFFDFHFHIIGGHIIIIICEGHCHHHIGFEGIDHHGHIIIGHIIIIICHIHGIGGHGHFDEFFFEEC@AC=;,39A@@CCCCCCCB<(++:><>CC +@D7DHSVN1:151:D12V0ACXX:8:1101:6727:1973 1:N:0:CGATGT +NAAAAAAATTGGATTTCGTGTAATAAGTTTGATATTCATCAATCCCTGTTAAAAAATAATCACAAAAATCTAAACATTTATCTATCCATCCATAAGGTAGA ++ +#4=DDFFFHHHHHJJIJJFHFHIIGIIDGIIIIJJJJJJJIJJJJJJJJJJJIIJIIJIJJIJHGHHFFFFFFEEEEDEFEDDEEDDDDDDDDDDCCCCDC +@D7DHSVN1:151:D12V0ACXX:8:1101:6717:1990 1:N:0:CGATGT +NCCAAGGATCCAGCACACGCGTCATTAGCATCACCGACCGTGAAACTTAAGACGTATGTCTTCTTAGGGATGGTTCGGACCACTTGAGCGATCGCGCTCTC ++ +#1:BDBDDHHHGHIHIIGIIIAEHGGICGGIIIG>FHHBEDDCCC>;=5?BBCDD=@<@98ACD3@@@99?()(59B9?@ +@D7DHSVN1:151:D12V0ACXX:8:1101:6984:1979 1:N:0:CGATGT +NGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTTCGGGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCCGCTCAG ++ +#1=DFFFFHHHHHEHIJJJIIJJJJJJJJJJIJJDGIJIGGIIJGGJJHIIIEGIHHHHFFDCDD?BBDCCDDA)>@CCB/;??B:?C5;@CCA@CC +@D7DHSVN1:151:D12V0ACXX:8:1101:7218:1939 1:N:0:CGATGT +NTCCAGTTCTGTACTTTTTGCTGGCGAGTAGTCCATGGGTATAAATTGGCCACGTGGTATCAACTCAGGGTCCCAACAGACAAAGTATATATCACCGTCCA ++ +#1=DDFFFHHHHHGHIIJJIIIIJJJEE??GFHGHIIJJGCHIEIJJHJIJGCGFHICHCHHIJJHEAEHEFBDECDDDDDDCCD>@@DCCFDDDCB?>B? +@D7DHSVN1:151:D12V0ACXX:8:1101:7051:1973 1:N:0:CGATGT +NCCACGTCGGTGAGCTCAATCTTCTCACATGGTGCTCCGCTGCTACAAGACAAGGCAACTGCTTCTGTCCTCGTGGTTGTTCCCTTGACGTTCCTGATTTT ++ +#4=DFFFFHHFFHJIJJJJJJJJJJJJJJJIIGIJJJJJJJJJJJJJJJJJJJJJIJJHHHHHHFFFFFFEECBDD@BBDDDDDCCDDDDBDDDDDACDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:7128:1990 1:N:0:CGATGT +NCCGATTTTTTCCAGCCCAAGCCCAGCTGTGAACGGCATTCGCCCAGCAGAAACAAGAACAACATCAGCTTCAAGCATGGTTTGCTCTCCACCATCTGCTG ++ +#1=DDDFFHHHHHJIJIJJIJJJJJJJIIHGJIGIJJIIJJJEHIFIJJJJHHHHHFFFBEDDDEDDDDDDDDDDCACCDCCDDDDDDDDDDDDCDDCCDD +@D7DHSVN1:151:D12V0ACXX:8:1101:7438:1941 1:N:0:CGATGT +NATCGGAAGAGCACACGTCTGAACTCCAGTAACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGCAACAAACAAGAATGCTCTCCCCGCAG ++ +#1=DFFFFHHHGHJJJJIJJJJJJJJJJJH4CFHGHHIHIIJJJJAFGIJJIBHCGGGEHHHG@CFFDD?############################### +@D7DHSVN1:151:D12V0ACXX:8:1101:7281:1952 1:N:0:CGATGT +NTCTTCTGATTCGATTACATTGGGGCCTGCAAACAGAAAGAATGGTTCTGCTGCTTTCAGGTGGTTGTAGAGCGCCGTTGAAGAATCCATGTTTCAGCTTT ++ +#1=DDDFFHFHHGFIIJJJJJJJJGHIGHAGIIIJJJJIIJJJJIFHGIGHIJIGIJJHGI=CGGGHHGCEDDDDCB@DBBDCDDCDDDDD>CDDCCACCC +@D7DHSVN1:151:D12V0ACXX:8:1101:7388:1963 1:N:0:CGATGT +NCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATCCCATGTCAGGATTGGGTAATTTGCGCGCCTGCTGC ++ +#4=ADDFDFHHHDHHIIIIIFGGIFHEHIFGHEHHIIHIBGHII@GHIIFBAGGIIIIHHBCEC>DDEC@CCCCEC;;;==A8:?A:@@CB>>9>528>@: +@D7DHSVN1:151:D12V0ACXX:8:1101:7352:1966 1:N:0:CGATGT +NCCACACTTACCCGGAATGCCTATTGTTTATGCAAGTGATGCGTTCTTGAAACTGACTGGCTATGCCAGGCATGAGGTTCTAGGCAACAGACATAGATTTC ++ +#18BDDDDFHFFDCGHIIIGIIADGGFG>GGEHGDD:BHGH@D?7D=DBB@>6>ACD;:=CBBB?CBBCC>:>:>> +@D7DHSVN1:151:D12V0ACXX:8:1101:7463:1968 1:N:0:CGATGT +NTGATTATTTGCAGAGATACTTTCAGGTGTAGACTTCAACAATGAACTGTGTGATTCCACAGCTCCATCATTCACCATGGAACCACTCCTACCACTTGCCA ++ +#1=DDFFFHHHHHJJJJGJJJJJJJJDACHHJIJ@<<:4?@D>BD9DGCB@B?@GHGCEEHBB@F@=@CCAEDHCEB?AABDD)..;;;;ACC;@5553; +@D7DHSVN1:151:D12V0ACXX:8:1101:7633:1929 1:N:0:CGATGT +NGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAACAAGGGAGCGCGACCCTTCGTCCCGGCCATTG ++ +#4:ABBDDDHBDAEHEHIHBFCHCHBFEBCFFGHG?H??(B<9CDCDCDDCCDC9 +@D7DHSVN1:151:D12V0ACXX:8:1101:7644:1970 1:N:0:CGATGT +NCTTCCCGGACTCGGGGGTACTGGTGTCCTTCGTCAAGAAGTTTCTTGATCTGGCCGGAGAGGTGCCCGATCACTGCCATTGGCGGTGAGATCGGAAGAGC ++ +#1BDFFFFHHHHHJJJJJFHIJIJFHIIJJJIIHHHHFFFFDFEDEEEEDDEDDDDDDDDDDDCDDCCDBDDDDDDDDDDDDDDDD9>?BACCDDDBBBD= +@D7DHSVN1:151:D12V0ACXX:8:1101:7801:1926 1:N:0:CGATGT +NTTCTATATCATGAGGTTGATCTCCAACGGGAACCTTAGTAATCCCAGGCAGATCAATGAGTGTTATGTTCACAACATTTGGCGAATAGATCTTCAATCGT ++ +#1=DDFFFHHHHHJJGIIJJJJJIJJJHGIIIJJJJJJJJIIIJJIIJIIJJJJIIJJJIGCEHIJJJJHHHHHGDFDFFFDEDDBBDDDEDDCDDDEDB< +@D7DHSVN1:151:D12V0ACXX:8:1101:7782:1934 1:N:0:CGATGT +NTGAAATTAACCCATTTGAATGTTGGGTCCATGTAATTTTTGTACATTTCAAGGATTTCATTGTGGCTCACCACACCCGGGTTAGTGAAGTTCCATATGCC ++ +#4=DDFFFHHHHHJJJJJJIJIJJJJJAFHHIJIIIJJJJJGHIJIJJJJJJJJJJJJJJJIJJGHJIIJIJJIHHEDBAC;@BDC;ACC>C;CCDDCCA: +@D7DHSVN1:151:D12V0ACXX:8:1101:7759:1956 1:N:0:CGATGT +NAGCCGAGTTTGAAAGTGTGAAAGTTATTTCACCACAAGGTGAAGTTGTAAAGCAACCCATGGTTAAGTTAAAGTCGCAATTTCCAACCTCTCCACTTAGG ++ +#1=DFFFFHHHHHJJJHGIHIJJIIIIJJJJJJJJJJJJJHGIJJIIJJHIJIJJJJJJIJJJIIJIJJIJJHHEHHFFDDEEEEEDDDDDDDDDDDCCDA +@D7DHSVN1:151:D12V0ACXX:8:1101:7902:1979 1:N:0:CGATGT +NAAGATTTTAATTACTTTGACCATTATTTTAAGTTTAATTGAGTTTTAATTATCTTTATTATTGTTATATACTCTATCTATCTCACAAAAAATTTCTCATT ++ +#1=DDFFFHHHHHJJJJJJJJJJJJJJJJJJIJJJJJIJJJHIFIIJHGIJIIJIJJJJJJJJIIJJIIJJJIJJJJJJJJJIJJIIGHFEFFFEEEEEEE +@D7DHSVN1:151:D12V0ACXX:8:1101:8152:1930 1:N:0:CGATGT +NGAAGCGAATGGGGGCCGGCGATGTGCCTCGGTCGGATGCGGAACGGCCTAAATCCGGTCCGCCGATCGGCTCGGGGGGCGGACTGACGTGGATTGTGAGG ++ +#1=DDFFFHHHHHJJJJJJIJJJIHJJJIJHHADDDDDDDDDBBBBDDBDDDDDDDDDDDDDDBDDDDBDDBD9@BD######################## +@D7DHSVN1:151:D12V0ACXX:8:1101:8046:1944 1:N:0:CGATGT +NCGCTTTCACCGGGGAACAAAGGCTGTCCAAGTAGAAGCTCCGCCAAGACACAACCTACAGACCACATATCTATTGCATTTGTATACTCACTAGCACCGAA ++ +#4=DFFFFHHHHHJJIJJJJJJJJJJHIJJJJIIIIJIJIIJJJJJIIIHHGHGFFFFEEEEEDDDDDDEDFEEEDDDEEDEEEEEEEDDDDDDDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:8344:1941 1:N:0:CGATGT +NATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGAATAGCCAACGACACGTGCACTTGGG ++ +#1=DDDFFHHGGHIIIGEHIIEHIGIIII@FGBEG@GG8?FDEGHFGFHGIGGHGAACC;?C=6?>>B################################# +@D7DHSVN1:151:D12V0ACXX:8:1101:8408:1968 1:N:0:CGATGT +NGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTTAAGCGCGTGACCTATACCCGGAGAT ++ +#1=DDFFFHHHHHJJJJJJIIIIJEHGIIGIHJIIIIJJJIJJIJIGIIJJJIJIIDHHGFFDDDDDDDDDCDDD@>CDCBBB@C93 +@D7DHSVN1:151:D12V0ACXX:8:1101:8512:1959 1:N:0:CGATGT +NGGGCTTTCTTTTCTTTCTGAATATCGTTACATCAAACCCTAACCCTATACCACCACCAACCATGTCTTCTAAAGCTGGTGGAAAGGCAAAGCCTTTGAAG ++ +#4=DFFFFHHHHHJJJJJJJJJIIJHIIIJJJJJJJJJJJJJJJJJJJJJJIJJJJJJJJJJJJJJJJHHHHHHHFFFFFEDBEEDDDDDDDDDDDDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:8618:1971 1:N:0:CGATGT +NAGCGATTATTATTACATCCAGACAAAGAACCTGAAGATCCAAAATAACAGCAACAATAGCAATAATAATATGCCTCTGATACAGAAATGCCAATATTGCA ++ +#1:BDDDDA?FFBDBGAFEF?FHICHIB>EGII@D>F@?BB<9B@FGGBDHE@?B@88BHIIACF=@EADGCE@ +@D7DHSVN1:151:D12V0ACXX:8:1101:8800:1943 1:N:0:CGATGT +NTTGAATGCTCTACATACCACCCATCCTTCTTCCTGAGGGGGTCCATTCTCATCAGATTCAAGACGATATTCATGCATAATCCAATCAGATTTTTGACCGT ++ +#1=DDFFFHGHHHJJJJJFHJJJJJJJIJIJJJJIJIIGIIJ +@D7DHSVN1:151:D12V0ACXX:8:1101:9612:1972 1:N:0:CGATGT +NTCTAACTTACTAGCCATAGACATAACAAGACTAAATTTCTCGTCCATAACAAGATCATCAATGGACTTACCATCACCCATGCACCAATCAAAACAGTGCA ++ +#4BDFFFFHHHHHIJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJIJJJJJJJJJJJIJJJJJJJJJHHHHHFFFFFEEEDDDDDDDDDDCCDC +@D7DHSVN1:151:D12V0ACXX:8:1101:9547:1985 1:N:0:CGATGT +NGAGACTTGGGTATCAACAACTAATGACAGAGGGAGCATTTGAGTTCTATCCCATGGAGAGGGAGTTGATTCTCCACGCACTGTCCTCCATGTACCTTACT ++ +#1=DDFFFHGHCFEHIJIJJIJEHIGGIJIIIIIGIIJCGJJIIFFIIGIIJJGGIIJJGGIGGICEEEHFFFFFCEACDBBCCDDDCD>CCC>CCCD +@D7DHSVN1:151:D12V0ACXX:8:1101:9674:1993 1:N:0:CGATGT +NGGCCATGGAGGCTGCGCTTGAGAGGGGATTGCCAGTAGCTCGTGCTTTCTGGTACGCGCGCAGGCCTGGGTCGATCTTTTTGACTGCTCCCCACATCCCT ++ +#1=DFFFFHHHHHJJIIJJJJIJGIJJJJJJJJJGJIJJIIIH;FGHIJIGAHEHHHFBCDBDDDBDDDDD9<>CAE?DEBDECCEECCCCCA?CACB?B<>>A>:>509@@B>@??<@@ +@D7DHSVN1:151:D12V0ACXX:8:1101:9856:1989 1:N:0:CGATGT +NGTCCTCCATGTCCTCCATGTCCATATCCACCGTGTCCATATCCACCGTGTCCATAGCCACCATGTCCATAGCCACCACTGCCTCCATAGCCACCATGTCC ++ +#1:BDDDDHHHFHFGIIGIICBHHGCHIJIIDHCCEFGGHGIGIJJGIIE?EDFIFDGBFIEHA48CA>EG@DG=A(6A>@CDBCA@>A3;((5,5:@>@# +@D7DHSVN1:151:D12V0ACXX:8:1101:10195:1926 1:N:0:CGATGT +NCACAGCATACATACACTAGAATATTCATGATTCAGCTAAGATGGTGATGAGGGACGCCAGTTGACGTTAATGATAAAAGAACACTCAACCATCTTTCTCC ++ +#4=DFFFFHHHHHJJJJJIJJJIJJJJIIIGIJJJJJJJJJJJJJHIJJIJJJJJJIJIIJHIJIJGEHHFFFFFEEEEEDEDDDDDDDDBBDDDDDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:10231:1927 1:N:0:CGATGT +NACACGGGCAACCACCCTCACCGCTCATTCCCATCTCTCCATCCACATACGAGATCTTGGGGGCAACACCGATGACAAGTGCGACGTTGGTGCTAGTTGAC ++ +#4BDDFFFHHHHHJJJJJJJJJJJIJIJJJJJJJJJJIJJJJJJIJJJJJJJJHHHHHFFFDDDDDDDDDDDDDDDCCDCDDDDBD? +@D7DHSVN1:151:D12V0ACXX:8:1101:10145:1992 1:N:0:CGATGT +NCACAGGTAAGTGAAAAGCATATAAGACCGGTACAAGTGAGAACTTGATCATCTTTGTGGATAGGGTGCCACGCGGCAGCTTGCTTCTCTGCATAATAGTC ++ +#1=DDDDDDFHFHJJIJGGGIHGIIGIIGGIIFGHIJIJJJDCHIJIIJJJJFHJJIFGIHIJCGG@?EEHH>BC?BDDDDCA8ACCACC:@CCD>ACCB: +@D7DHSVN1:151:D12V0ACXX:8:1101:10464:1991 1:N:0:CGATGT +NCTCGGTGATCATTGGAAATCCTTGGGCATATTTAATGTGACGAACAGACCCAACCTGTTTACCATCACCTTCAATGATCTCAATGCTCTTAAATCTGTTA ++ +#4=DFFDFHHHHHJJJJJJJJJJJJIIIJJJJJJJJJJJJJJJJJIJIJJJJJJJJJJJJJJJGIIHHHGHFFFFFFEEEEEEDDDDDDDDDACDDCDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:10689:1925 1:N:0:CGATGT +NTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAA ++ +#4=DDFFFBHHHHFIIJIIJIFGHIIJJJJIIJJGIJJJJGIJIJJGGIIGEIGHGHGEHEHFFDD=CAB@DDDDACCDDBDDDDCC??BBBCCBDDDCCC +@D7DHSVN1:151:D12V0ACXX:8:1101:10534:1952 1:N:0:CGATGT +NCTCTGGTCAGTTTCAGTCAGAGCCAGATCCTGAGTGAGCTTCATATTTGCCTCAGCTAAGGCCTCATTACGCATCTCAATCTGACCCAATTCCATCTGCA ++ +#1=DFFFDHHHHHJJJIIJJIIJJJIJJJIJJJIJHIJIJIIIJJJIJJJIIAHIJJIJJGIJJJJIJJJJIIJGHHHHFFFFFEEDEDACDCDEEDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:10744:1959 1:N:0:CGATGT +NTCCAGCAGTTGCCGAATCTGCTCTTCTGCTAATATTTGTTCCCAGCAAAAATCTTTCACGTAGATTAGCAGCTTCATTCAGTCCTTCCTTAGCCCACTCC ++ +#1=DDDFFGHHHHIJGGHHIIJHIJGGHEIIJJJEGJJGGHEHJGHHGIIEGIIJGIIAHHACGGCHGGDEHHH>=@DFBBBBACC@CEDCC>@C>35(3<>@C>@ +@D7DHSVN1:151:D12V0ACXX:8:1101:10522:1978 1:N:0:CGATGT +NGGAGGGAAGCGAATGGGGGCCGGCGATGTGCCTCGGTCGGATGCGGAACGGCCTAAATCCGGTCCGCCGATCGGCTCGGGGTGCGGACTGACGTGGATTG ++ +#4=DDFFFHHGHHJIJJJJJJJJJGIIHGEFFFFFDDADDDBDDDDDDDDDDDDDDDDCDDDDBDDDDDDB@DBDBDD<@BD&985<&0584@<2<@#### +@D7DHSVN1:151:D12V0ACXX:8:1101:10555:1981 1:N:0:CGATGT +NGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGGTAAAATTCTGGATTTATAATTTATAATGAAGAGAAT ++ +#1:AABADB?FBF?GFFEBFG;HEDBFFEG99C9?DG:?9?FB3 +@D7DHSVN1:151:D12V0ACXX:8:1101:11174:1979 1:N:0:CGATGT +NTTCATATTTCTTCTCAAATTCACCAGAAAGATGCCTCTTGACAAAAGTGGTTTTACCTGTACCGCCGTCACCGACAAGAACAAGCTTGAAACTAGGATAA ++ +#1=DFFFFHHGHHJJEHIIJJHIJIJJJJJJFHJIJJJJJJJIJJJJJGHIFHHIHIIJJJJHGJJIIFHFFFDD@DDDDDDDDDDDDCDCDDDDDDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:11399:1971 1:N:0:CGATGT +NGCGCCATCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCATTGCACCCCCGATGCCTCTAATCATTGGCTTTACCTGATAGAACTCGTTTAGAGCTC ++ +#4=DDFFFHHHHHJJIJJJJJIJHHIJIIIIJJJIGHIIIJJJJIJJJJJIIIJIHHFFFFEECEEECDEDCCDDDDDDDCCC>>A@CDDDBDDDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:11506:1954 1:N:0:CGATGT +NGCATGAGCATTTTGCACACCCTCGTCCCATGTATTAGACACCACCGAGGGAGTTTCAAGAGCTTGGAAGTTTGCCCATTCCGTTTCAACTTGCGACGTTA ++ +#4=DFFFFHHHHHJJJJJGJJJJJJIIIJIJDFIJJJIJJJJJJJJJGIJJJJCHHHHHHHFFFFEDEEEDDEDDCDDDDEFDDDDDEDDDDDDDDDDDBD +@D7DHSVN1:151:D12V0ACXX:8:1101:11818:1923 1:N:0:CGATGT +NCCCCCTCCTTGCGGTTAAGGTAACGACTTCGGGCATGGCCAGCTCCCATAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGAATTCACCGCCGTATG ++ +#1=DDDDDFFFFFIIGIIIII4CGGFIIEIIIIFDFCFEIFFIFFFEFCEFFEFEFDDDB9;?B)8@B1>AAB><B@0013 +@D7DHSVN1:151:D12V0ACXX:8:1101:11986:1927 1:N:0:CGATGT +NCCCCGTCCTCTGCCACTAACAATAAAAACAGTGTTCTTCGGATCATTGCAGAGGGTGTTCAAGAGCGATATGAGATCACCGCTTGGTGATTTTACAATGG ++ +#1=DFFFFHHHHHIJJJJJJJJIIJJJJJIJJDHIIIJJJIJIJJJJJIJIJIJJJFF;CHHHHHHHFFCDCDEDDDDDDDDDDDDB@BACDEDDDDDDDA +@D7DHSVN1:151:D12V0ACXX:8:1101:11889:1929 1:N:0:CGATGT +NCGCGCCATCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCATTGCACCCCCGATGCCTCTAATCATTGGCTTTACCTGATAGAACTCGTTTAGAGCT ++ +#1=DDFFFHHHHHJJJJJJJJJJJJJJGIJJJJJJJHIIJJJJIJJJJIJJJJJJHEEFDEDEEDDEDDDEDDDDBCDDDDDDDDDDDDDDDBDDDDCDDA +@D7DHSVN1:151:D12V0ACXX:8:1101:11908:1946 1:N:0:CGATGT +NTAGAATTGAATATGAGAGTCCGATATTGTCGGCGATATCCAAGAGTCTGCATAAATGTGAACAGAAGCAAAATCGATGCCGAGGATTTGATGGTTTCTAA ++ +#4=DDDDDFFFFFIIIIIIIIIII;F?FGGIIIIIIIIIIIIIIIIFFIIIIIFFFFFFFEEDDDDCCCCCBBBBBBBEBBBBBBBBBBBEBBBABBBBE@ +@D7DHSVN1:151:D12V0ACXX:8:1101:11932:1983 1:N:0:CGATGT +NCCGATGTTTTTTTACATCTCACAGCTTCGGCAGATCGCTTAGCCCCGTTCATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAA ++ +#1=DDFFFHHHHHJJJJJJJJGIJJJJJJJJJJJJIIJJJJJJIJJJHHHHFFFFFFDCDDDBBDDDCDDBDDDCBDDDDDDDCDDDEDDDDDDDDDDDCD +@D7DHSVN1:151:D12V0ACXX:8:1101:11900:2000 1:N:0:CGATGT +NGATCGGAAGAGCACACGTCTGAACTTCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAGGACCTAAAAGGGACTGGACGACGA ++ +#1=DDFFFHHHHGIJJJJIJJJJJJJJJJJJJJJJIGEIDEHEIGGGIIIJJJHIIJF@?CHGB;@CDA################################ +@D7DHSVN1:151:D12V0ACXX:8:1101:12165:1969 1:N:0:CGATGT +NCTCAGGTCCAATACGTCTAAAATTGTATAAATTCAGTAACTCATCAACTGTAGGCTCCCAAGGAGCAATTTTACTTTTCTCAATTGCCCCATAAGTAAGA ++ +#4=DDFFDHHFFFIJJIJJJJJJJIJHIIJJJJJJJJJJJJJJJJJJJJIJJJJJJJJJJJJJJJJJJJJJIJJJHHHHHHHFEFFFFEEDDDDDDEDDDA +@D7DHSVN1:151:D12V0ACXX:8:1101:12387:1928 1:N:0:CGATGT +NCCAGTCCTGTATCTCTAGACTCCGCTCAACAAGTTATTGCTAACATTGTTATACGAACAGGCACATGTTGCGCAAAGGGCCCGTTTAAAGTCCCAATGAT ++ +#1=DDDDDHHFBDIGGIIIIGIIIBGEGHII@?GDHEIIGHIGIIICHHEHIIIIIIIIGAEGEGEGHAEEHEECCBCCBBBBBBBCA:AC>>>@:?CCAC +@D7DHSVN1:151:D12V0ACXX:8:1101:12407:1934 1:N:0:CGATGT +NGGGGGCTCGAAGACGATCAGATACCGTCCTAGGCTCAACCATAAACGATGCCGACCAGGGATCGGCGGAGGGTACTTTTAGGACGCCGCCGGCACCTGAT ++ +#1:BDDDA?FFFAFEF>7DF@ADFD*=BFE=CFFBFEFFCAE=?BBB################################ +@D7DHSVN1:151:D12V0ACXX:8:1101:12364:1941 1:N:0:CGATGT +NAAAATCCGGAGGACCGAGTGCTGATCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGCCAATGGAACAATGTAGGCAA ++ +#1=DFFFFHHHHHJJJJJJGHIJJJJJJJGIJJJJAHIGIHHHHHFFFFDDDDDDDDCCDDDDDDDCCDCDDDDDDCDDDDDDDDDDCDCDDDDDEEDDDA +@D7DHSVN1:151:D12V0ACXX:8:1101:12324:1944 1:N:0:CGATGT +NCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGT ++ +#1=DFFFFHHHHHJJJJJJJJJJJIJJJJJJJJJJJJJJJJJJJJJJJJJJJJIJJJIJIJJHDDDDDDDDDDDDBDBBDDDDDDDDDCCDDDDDDDCDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:12432:1955 1:N:0:CGATGT +NAGGTATTGGTTTATCATGGTGAAAAAAGACCGGTATTTTTTTTTGAACCGGGTTCGATTTCAACAAAAGATCACACTTGGGTCGCATAGTTGCAGCAATG ++ +#1=DBDFFHHHHHIJJJIIJCHHGIJIIJCHIII?DHIJJJJJJF45@AC>BD8<58(;@B3:@44ABD>84:>>:49@@CD<<@@BBBC@B:4@C:3 +@D7DHSVN1:151:D12V0ACXX:8:1101:12300:1960 1:N:0:CGATGT +NGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAA ++ +#1=DFFFFHHHHHIJJJJJJIJFIIIIJJCGHIHJJJJJJIIJIJJIIIJJJFJHIIGIJIIHHHHFFDDCEDDECD>CDDDCDCCCDDDEEEDEDDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:12409:1966 1:N:0:CGATGT +NTGCAGCTAGCATTGGAGATAACAGTGAGGTCTGATGTGTACTCGTGCTCGTTAACACCAACAACGAACATAGGAGCATCCTTGCTGGGAGCAGAGATGAT ++ +#4=D?DFFGGHHHIIIGIIIIIIIIEHIIIFEHIIIIIGIIIIIIGIIGHIGGIIGIIFHIIIDGHGBDEFFEDA@=ACCCDCCCCDC@BDD?C?BDCCD# +@D7DHSVN1:151:D12V0ACXX:8:1101:12986:1925 1:N:0:CGATGT +NGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAATTTTAAAAGCCAAGTCCTCCATCTGCATCA ++ +#1:=?DDABHDADEHIIBHIIHEGHIIEEGCDFBBHIIEFABD?D;6;F;;8A4;@A;3?)=>;6;C################################## +@D7DHSVN1:151:D12V0ACXX:8:1101:12797:1952 1:N:0:CGATGT +NAGATGATGTGTTGATTATGCTACTTCCTTCTTTCATGTGTGGCAGTGAGTACCTTGCCATGAAGAAGTAAGCGAAGATATTAGTTTCAAAAGTCTCTCGA ++ +#1=BDFEFHHHHHIJJJJJJIJIIJJJJJIIJJJJJJJIIGIJIIJHIIIHIJJJJJJJJIJIGIIJIGGIJIIEBHFEFFFFFCEEEEDEEDCCDDDDBD +@D7DHSVN1:151:D12V0ACXX:8:1101:12954:1969 1:N:0:CGATGT +NTACGGGTACCACCAGTAACATGTCGCCTTGTTTATGGCCCGATTTGATGTACTCGACTAGGCCCCTTAACTCCCAGTTGGGTATTGCTCGCTTGTTCATT ++ +#11=A?8<@FFBFBEFDFHDHI>AFBDCEDGFFG@B858CD@ACACEDDDDB;BDCCCACCCDDCDCDDDCDCCCCDCACCA4 +@D7DHSVN1:151:D12V0ACXX:8:1101:13153:1957 1:N:0:CGATGT +NTTCTGTTCTACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGAC ++ +#11BDBBD?DFHFDHHGGGHGBHGHGCFH7?E?FG@DDFGFGIIIIIDCFB/?=F;F7A;EHE@>@739;BBBB?>2>C>B@9AA +@D7DHSVN1:151:D12V0ACXX:8:1101:13035:1969 1:N:0:CGATGT +NGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAATATAACAGACGTGGTGAGAAAC ++ +#4?DDFFFHHHHHJJJJJIJJJJJJJJJJJJJIIJJJJIHGIIJJJFHIIIJJHIJHGHCHHFC>@@;@?############################### +@D7DHSVN1:151:D12V0ACXX:8:1101:13125:1977 1:N:0:CGATGT +NCCAACTACTACGTAGACAAAGTTACATTGAATCCATAATACCTACTAAAGTAAGATCATCAGTCGGACACTTAGCGTGCAGTACATGTAGAAGAAGAAAA ++ +#4=DFFFFHHHHHGGIJJJJJJIJJJIJJJJJJJJJIJJJJJJJJJJJJIJIIJJJJIJJJJIIJJJJJIHHHHHHEDCDCECDDCCDDCDDDDDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:13364:1928 1:N:0:CGATGT +NAGAGAGATTCCAGCCTTGGCATCAAAGATGCTTGACCTGTTGTCACCAATGAAGTCGGTGGACACAACATCATCCTCAGTGTAGCCCAAGATACCCTTCA ++ +#4=DFFFFHHHHHJJJJJJJJJJJJJJIIJJJJJJIJJJJJIJIJJJJJJJJJJJIJJJFGIHHIJJHHHHFFFFEEDEEEEDDDDDDDDDDDDDDDDDD> +@D7DHSVN1:151:D12V0ACXX:8:1101:13315:1990 1:N:0:CGATGT +NCCCTGCTCTCTTTTCTAGCCTCAGCAGAGTGCATGGTAATGCATGCATTGATCAACAGATTTTCCAACTCCAGGGTTTCTATTAGGTCAGAATTCCATAT ++ +#1=DBDDFHHHHHIJJJJJIJJJJJIIJGGAFGGJJJDCHJIJIJIJIGIIJIJJIIIJIIJJJIJIJIJJIJIIJ>CEHHCEFFFECEEEEDEDDDEEDD +@D7DHSVN1:151:D12V0ACXX:8:1101:13724:1970 1:N:0:CGATGT +NGGTGCAAACAATCATGGAAGTCATGACCTATCTCTTAAGCGAATAACACTAGATGATACATGTGACCGAAATGAGGCCACATCCACCTACCAATTTCTTC ++ +#1:=BBDDHFFBHDHGGH@EGHBHEHGFHIHIGHDFGHHHEHGGHCHIIIIAGFCFGGIIHGE=CFG>BHFEDDECCBCBB?CCCCCBBCC@A>C:3>CCA +@D7DHSVN1:151:D12V0ACXX:8:1101:13917:1935 1:N:0:CGATGT +NTCCAAACCACCAGCATTGCCAAAACAGTAGCTACAACTACGACCCCAGCTCGCCTCGTTAACCTCAGTATCGACAACTGAGTTGCCGATACTGCTAACTT ++ +#1=DFFFFHHHHHJJJJJJJJJJJGGIJDFHIJJIJJJJIJJJJJJJJIJJJJJJHHHFFFDEECECCACDEBDDBDDDDDDDDCDDB>@;B559<99-?4>>>C:>C############# +@D7DHSVN1:151:D12V0ACXX:8:1101:13776:1993 1:N:0:CGATGT +NGAACGGAATAACCAAGCAGTAAACTATACAAAATGCCTACCAAAACCAATGAATCAGGAGCTTTCTTGCATCACCGCTTCACTTGGATTCATAGCAACAC ++ +#1=DDFFFHGHHHJJJJJJJHIJJJIJJJJJJJJJJJJIJJJJJJJJHIIJJJJJGIJIJIJIIHHIIFHHHHHFFFDDDDDDDDDDDDDDDEEDDD3ACB<@<>2?B35 +@D7DHSVN1:151:D12V0ACXX:8:1101:14410:1939 1:N:0:CGATGT +NCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTATCGGCCAAGGCTATAGACTCGTTGAATACA ++ +#4=DFDFFHHHHHJJJJJJJJJJJJIJIJJJIJJJJJIJJJJJIIJJJJJJJJJJJJJJJJJJIJJHHFFEEEDDDDDDDBDDDDDDDDCCBA@AC@?CCACDDDA@AC +@D7DHSVN1:151:D12V0ACXX:8:1101:14443:1960 1:N:0:CGATGT +NCACAACTTCCCTTTTCCCAATGGCAACCACATTCTCTCTCCTCCCATCAACCACCTACATCCGCCACACGCGCCACCGTCTCAGCCACCGTACCAAACCC ++ +#1=BBDDDHDHDHEHIJJIGFFCHGGCGH7F8?FDEIJEHGIJIJEGHGGGGGIIIIIICHGEIIGHHEF:3>CDCBDDDD<@:>3+4494>:A:>3::(:>CA9 +@D7DHSVN1:151:D12V0ACXX:8:1101:14689:1957 1:N:0:CGATGT +NTAGAGGAGAGAAACCTGGGTGTTATCATCTGGATTCTTCAATATAGCTTCTACTACCTGAAGCATTGGAGTAATGCCAGTTCCACCAGCAACCATGCCAA ++ +#1=DDDDFHHHHHIIIGGGECGHIGEGGIIIIIHGIGHIIIIIIIIGGIIIIIIIIIIIHGGHGHIEHHIICCHHHHFFFCEDEEE@BDBCDDDDDCCDD: +@D7DHSVN1:151:D12V0ACXX:8:1101:14788:1930 1:N:0:CGATGT +NGGCCCGCCCAGACTTTCAACTTCCTTATGAACAGAGCTGGGCATCGACGGGCCCACCTGGGACCGTTGTGTCAATACCATCTTTCCAAGAGGGGCCCCCC ++ +#1=DDDDDFFFFFIEGIBHH>FF4?GG?F>A((4>:28?-9<<ED>(;>B################################# +@D7DHSVN1:151:D12V0ACXX:8:1101:15092:1970 1:N:0:CGATGT +NCAAAGCCTTGTTATGCTCGGCCCATTTTCTGTTGAGCTCTTCAAGAAACAAAGCTCCTTGAGCAGCCTCTATGGACTTGGATATTTCCTTCAAATGAGCA ++ +#4BDFFFFHHHHHJJJJJJJJJJJJJJJJIJGIJIJIJIJIIIJJJIJJJJJJIGJJJJJJIJJJJIHHHHEFFFFDFEEEEEEDEFEEDDDDDDDDDDCA +@D7DHSVN1:151:D12V0ACXX:8:1101:15224:1976 1:N:0:CGATGT +NTGGGGTTTCATATTGAAATAATCCAAATAGTAAAAAAAAGATAAAAATGAGATAGATGGAGTAAAATTTTAAACAAAACACAGTATAAACATTAATCATT ++ +#1=BDD=AFFFHHIIHHIGGIIGHHIIIIGI?GEEEGIIHGFGHIIIGICDD@EAECGHAHC7?@@DD@DEDCCCABBBBB=B?5>CCDDACC@CAA4>CC +@D7DHSVN1:151:D12V0ACXX:8:1101:15243:1990 1:N:0:CGATGT +NGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGGGAGGCGGAGTGAGCAGGCCTTCCGACCCAACAAAGTATCAAGCTTGCGCATC ++ +#1:BBDDDDAB:CE<@EEEDEE<@D?B@E:D:9DDC:B?;B@D########################################################## +@D7DHSVN1:151:D12V0ACXX:8:1101:15082:1998 1:N:0:CGATGT +NATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAGTAAACTTCACTGGGTATGCTCCCTTCGATAC ++ +#114A;7DAFFFDGIIBFFFIFIIFGABGFGFEEBFIF0?FF>DDDFEFEF6;'6@7=?EF######################################## +@D7DHSVN1:151:D12V0ACXX:8:1101:15381:1935 1:N:0:CGATGT +NCCTACCTCCGGCTGACCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCTCCCGCCGACATCTCCGGACTCCCTAACGTT ++ +#4?DFFFFHHHHHJJJJJJJJJJJJIJJJBFHIIIJJIIIHHGIJIJJJHHHHFFFFFFDEEECEDBBDDDDDDDBB>B>9>BCBCC +@D7DHSVN1:151:D12V0ACXX:8:1101:15574:1977 1:N:0:CGATGT +NTGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCT ++ +#1=DFFFFHHHHHJJJJJJJJJJJIIJJJJJJJJHIJIJIIJJJIIJJIJJIIJJIJJJJHHHFFFEEEEEEEDDDBDDDDDBDDDDCDDBCCDCDDDDD> +@D7DHSVN1:151:D12V0ACXX:8:1101:15917:1981 1:N:0:CGATGT +NACGCTTGAACCTTGCAATACCACGCTGCTCCAATCAATTTATGCATCATCAAATCATATAACCTTCTCCACGATGAACACCACTGACCATACTGTCACAA ++ +#1=BDDFDHHHFHIJJGGIJJIIJGDEEGAFHGEIJGGIIFIIAEIGIJJEECHCHHEHJIJJ@FGCGGIIHCEEFDEDCED??CCCCD3>CCDDFCADD= +@D7DHSVN1:151:D12V0ACXX:8:1101:15836:1987 1:N:0:CGATGT +NCTTGCGACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGCGTCCTAAAAGTAACATCCGCCGATCCCTGGTCGGCATCGT ++ +#4=DD=DDDFHFBGGIIGIHIGEGHAHGIGIIE??BBBB5@>BBB9398?CCB(+05CB? +@D7DHSVN1:151:D12V0ACXX:8:1101:16205:1941 1:N:0:CGATGT +NTGGAATTTGGTGCAATAAGGTTTAAGTTAAGCTAGGACAGGGCCTGCTGCAATAGCATCTCCTGGCAGCACCTCCACAAGCTCCTTCGGGAAAACCCTCA ++ +#1=DDFFFHHHCHIIIJJIJJJJJJJJEIIIIJIJJIJJJIJIJIJJJJJJJJJJJIJJJJJIIJJGIJIHHHHFDEFEDCDEDDDDDDDBDDDDDDDDDB +@D7DHSVN1:151:D12V0ACXX:8:1101:16409:1934 1:N:0:CGATGT +NGGACAATTTGGATTGGCTGAGCAGGGCCACCAACTGGGCCAAGTTTAGCGCAACTGCTGGATTGGGTGTCATCCATAGAGGTCATCTGCAGCAGGGTCGA ++ +#1:BDFFFDDHHDIGGIIDG@?>BBF@EHEGFGHICHHIIGIGE?BFGHFIIIHIBHA?=@BEFC;=(9>C@CCCCCCCCCBACC@CCCCCCCB8?@9AB9 +@D7DHSVN1:151:D12V0ACXX:8:1101:16670:1940 1:N:0:CGATGT +NCTCAAGGTTTCCACGATGTAGTTAGCATAAAGATCCATGGAATGCTGTATTGCATTATAAGCGGTAGTTGCTGGGAGAAATTCATCAACTGCAACATCCT ++ +#1=DDFFFFHHGHJIJGGHFHGHGFGIGIJIIDGIGHGIHIGHIJIJJFFIIIIJJJIJJIIGIIGGGGEGHHHHC@BAEEHHHFFFFFFFCECEDDDD>CDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:16753:1989 1:N:0:CGATGT +NGGAAAATTTCCAACCGGCAACAAAATATCAATAATGTACACAAAGATGCCTTCTTCTCTTCCGAAACAGAGGGCTAGTAACTTAATCTAACACCAGTTTA ++ +#1=DFDDFHHFHHJHIJHIJJJIJJIGCHIJJIGGGIDFGHGIJIGIJIJGGIIGHGIIIIIIJHFFFD;CCC?BDAACDEDECCDEDDDDDDDDDDDDD@ +@D7DHSVN1:151:D12V0ACXX:8:1101:17022:1938 1:N:0:CGATGT +NTTTGAATTCACATATTGCTTTGAAGGAAGTGATCCAAATCATCAATAATGGTCCCAAATTCAAGGATGCCTCTTTAATAACAGTGCACAGATAATAAATA ++ +#1:DDDFFFHHHHJJJJIIJJGEFDHFEEGGHHGHHJJIGIGJJJJJJIIGGFFGGIIIJIGIIIIIJGGIJGHJGHIIIGEEEACEDCDCCEEAEDCCDC +@D7DHSVN1:151:D12V0ACXX:8:1101:17015:1979 1:N:0:CGATGT +NCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCC ++ +#11+ADDDFFFBFEFF@GHEFHIFIFIIIIFFGIIIIIIIEIFBADFFFEFIBFGEEIIIFEEA3@?<@>BBCECBBBBB@B@:@@BABA>A>>:900598 +@D7DHSVN1:151:D12V0ACXX:8:1101:17401:1957 1:N:0:CGATGT +NAGAATATTGCTCAAGAAGAACGATTGCGTGGTGGCCAGAAGGACGACCGAGAGATGATGATGGCATTTAAGGTTCAATCAGACACACGGGGAAAATTAAA ++ +#1=DDDFFFFHFHJIIGIJIGIIHIGIIB?CF:BDDGHIJIJDGBFGIIH8=9AAEDCDCCDDDCDDDDECDC:::A@CACCACBCDDDBDD<@?CDCCDD +@D7DHSVN1:151:D12V0ACXX:8:1101:17375:1968 1:N:0:CGATGT +NGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGCATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAGTTAAATAGGGCGTCGGCGGACAGTCAAT ++ +#1:1B1@=FF;A?GG>GAEEEFCGFFFB>F9BFEF;)8D(?B**8B-78@F)''-=(?C)7BB###################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:17446:1974 1:N:0:CGATGT +NTTGACCTCCCACTGCGAGGTCGAAGAATACCTTGGGGTTCGACATTTGTACTTTTGATTTAGGAAATTAGGGTTTTGAATTTGGGATTTTGTATTTGAGA ++ +#1=BDFFFHHHHHJIJJIJJFHIIIIGHIJJJIJJJJJDGGJGIIJJJJIHHHHHHHDFFFFFDCCEEEDDCD;?@BB?ACEDDCDACDDDDBDEDED>?< +@D7DHSVN1:151:D12V0ACXX:8:1101:17277:1978 1:N:0:CGATGT +NTTGGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCGTGGCACGGCTCAACA ++ +#1=DDFFFGHHHHJJJIIJIJJJJJJHIJJJJJJIIIHIIIJIGAHHFFFFFFEECEDDDDDCDDDDDDDDCCDDDCDDDDDDDED>?<9ECHDED@CD@;?@CA>AD>AB?>? +@D7DHSVN1:151:D12V0ACXX:8:1101:17548:1932 1:N:0:CGATGT +NTAAGGAACCACGAGGGGGACATAATCACTTGGTTCGCTAGACCAAGTGGGGAAAAGGAGATAAACAAGGCAGAGCTCGAGGCGATCTGTATAACCATCGA ++ +#1=DDFFFHGHHHEHIIJIGIJJJJJJIIJJJIFHJIGGIJJJHGHHCDFFDDDDDDDDDDDDDDDDDDDDDDDDDDDDBDBBDDDBBDDEEEECCDCDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:17834:1938 1:N:0:CGATGT +NTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTA ++ +#11BDBDDHDA?CFGBB>>35;>A:>ACC@8?@B?:ACD4> +@D7DHSVN1:151:D12V0ACXX:8:1101:17812:1949 1:N:0:CGATGT +NCATCATTATCGGTGTCTACTTCCATTAATATCTCCTTAATGCTGTCCTCGTCAGCTATGCCGTACTCCATCATCGCTGTTTCTAGTTCATCTGTTGTATT ++ +#1=BDDD?FFFFFDG:FFDCFFEEHHICEFHGIIIIFIFC>DFIIIIIEFIDFCDEGCCFFGIAFEFIIFE;>CEDDB69>@A>AB5;;@BD>:ABB#### +@D7DHSVN1:151:D12V0ACXX:8:1101:17854:1960 1:N:0:CGATGT +NTGAAGTTTAACAACATCTTCTCATGAGCATAGCTACTGTTTGCATTTTAATGATAAGACTACTTGATTCCAAACTAAAACAGAGAAGCATTTAATCAAAC ++ +#1:BD=B?FHFHFGIIIIIIIIIIIIGEGGCAHIIGGIIFGHHIGIIIIIIIIIIIGGGGIIIIIIIIGIEGGGIIHIGGHHHFCCEEEEEEFEDCCCCCC +@D7DHSVN1:151:D12V0ACXX:8:1101:18152:1936 1:N:0:CGATGT +NGCCAGCGCAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACAGGCAAAGCCCGCATCGACCTTTTATCTAATAAATGCATCCCTTCCA ++ +#4=DDDDDHHFHHIIGIHHC@DECBCDDBACDCCFEDDDDDB@B?BCDDDBCDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:18982:1983 1:N:0:CGATGT +NCAGAAATTTGAATGATGCGTCGCCAGCGCAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACAGACAAAGCCCGCATCGACCTTTTAT ++ +#1:BDDDFGGHHGIGJJGHIFBGIIEHIJGFGIFJIIJ@F@B=HHFDDBBA?>?CDDCCACCADACC:CCDDDCDAB>ABCCDCBBDBDBBBDBBBCACAC +@D7DHSVN1:151:D12V0ACXX:8:1101:19076:1949 1:N:0:CGATGT +NACTGCAACTCTGGTGGCCAAATTCAACCATGACCTCACACCTCCACAAGCAAACCAGCAACAACCTAAACTAGTAAGCGTGTTAAAAATACAACCAGAAA ++ +#1:DDBDDDHFDBHCGGGEHICFGIIIEDD@HIEBGEEGIIGIIADGCHIIHEHFCCFAFHHIIE=AEHFDDDB@>B;6=;8,;AD@AA2>CCDC;AB;:@CCCCDACCDCDD7><@AC:3:?3:9:ACBB(59<8??B###################### +@D7DHSVN1:151:D12V0ACXX:8:1101:19003:1988 1:N:0:CGATGT +NAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACA ++ +#1=DDFFEHHHHHIIJJJIJJJJIJJJIIIJFIIJIJJI;FFHIJJJIIJGIIJJJJJIIJBAHHHGFFEA9?D/<(;>>A>B'389A;@A>@:>A5>A>@A@:> +@D7DHSVN1:151:D12V0ACXX:8:1101:19743:1963 1:N:0:CGATGT +NTATATTCTTATTTGTGGTATTGACTTTCAACACTCACAATGGGCAGAAATATTATAACATGCCCCTCATACGAAGGCCCGATGTGAGCTGAAGATGTGTT ++ +#1=DDDDDHHHHHIIGHICIIIIIIIIIIIFIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIGIIIIIIIIIIIIHHHEEECBBBBCECCCCCCCCCC@CDC +@D7DHSVN1:151:D12V0ACXX:8:1101:19669:1995 1:N:0:CGATGT +NAACTTGGCACTTGGCCCTTTTTTCCACTACCATAATACACCTTGTGTTGGTCAGGAGATGAAAGGGGCAAGTACCAAGCAACAACCCATTCGAGATCCTG ++ +#1=DDFEFHFHHHJJJJJJJJJJJJJJJJJJIIJIJJIJJJJGIIFHIJJFGIJGG@AFHIGIIIHHHFFDC;CCCCDDDDDBDDD?@BCDEEEDBDDDD@ +@D7DHSVN1:151:D12V0ACXX:8:1101:19940:1931 1:N:0:CGATGT +NCCGGGTAATCATTGAAATTTCATCGTGATGGGGATAGATCATTGCAACTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAACTCGCGTT ++ +#4=DFF@DHHHHHJJJJJIJJJJJJJGIGJJJJJHEIHGIGJJJIIJJJJJJJIJIIIJIJJJIHIJHHHHECDFDEDDCCCB;@D8?CDDDCDCDBBD@B +@D7DHSVN1:151:D12V0ACXX:8:1101:19890:1976 1:N:0:CGATGT +NTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCG ++ +#1BDFFFFHHHHHJJJJJJJJJJJJJIJGIJJJHJJJJGJJJIJJGGIIJJIJJJIJHHCHHHFFFEEDDEDDCDEDDDDDBDC@CCDDEDDCCCC@B?B5 +@D7DHSVN1:151:D12V0ACXX:8:1101:19845:1984 1:N:0:CGATGT +NGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGA ++ +#1=DFFFFHHHHGJJJJJJJJJJJJJJJJJIJIJJJIJJGIJJJJEFGEIJJIEHIHGHGEHDB;);(..3??BBD3@?AB@9AA7CCDCDDC:::@CDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:19811:1989 1:N:0:CGATGT +NAGAAAAGCTCCAAAAGTAATTGGAGATTGAGGACATACCTTATCCGTCGGTTCATCATCACTCACAGGAAGAATCACAGGGGGGTTACGATTACCTTGAT ++ +#1=DDFFFHFHHHIIIIAIGIIIIIIIIDGGIIIIIIIGIIIIIIIIHIIIFHIIIIIIIIIIIIHGGHHFFFFCCCECECCCCC>BBCBBBBBCCCCCCC +@D7DHSVN1:151:D12V0ACXX:8:1101:20197:1937 1:N:0:CGATGT +NTCCTCATAAGCCCCACCCAAGAACATCCCCAGATAATAACCACCCCCACAGCCACCATTTCCTTCTCTTCCTCTCTCCCCAATGCCATGAAGGAGCAAGC ++ +#1:DDDDD4AAFFFFDFIFIFCEFD?GGIBFFII>DGEGEBGFIBDFA8F@=@CEFCAAEB:@>;@7>BBAA>@BABBBBBB?@ABA:>:@AA3>AECBD:?@CCCD@ +@D7DHSVN1:151:D12V0ACXX:8:1101:20297:1996 1:N:0:CGATGT +NCAAACTTGTCTTTTCCAACACAACCAATGTAACTTGTTGCACCGGGTTTTTGGAGCATCCACTGGGCAACTCTGATTGTATTTTGAGTAGAACCTCCAGC ++ +#1=DDFFFHFDHHHJJIFIJJGIJJGIGIIIGGIGIJGHGIIGIGGI@B;CCFFGHHHHC@?BDDDACD8?CBD:> +@D7DHSVN1:151:D12V0ACXX:8:1101:20580:1968 1:N:0:CGATGT +NAACCTCTTTACTCGTAGTCCCACCACGACTACCATAACTCCACGGTTTAGCCAATGTAGACCATGAATACGAATCCCCACCCCAAACATCCAGATCGGAA ++ +#1=DFFFFHHHHHIJIHIHJJIIJJJIHIJJIJJJIJJIJJJJJJJCHIIIJJJJJFHHIFHHHHFFEECFDDCC?CCDDDDDDDBDDDCDDD@C@CBBDD +@D7DHSVN1:151:D12V0ACXX:8:1101:20775:1992 1:N:0:CGATGT +NCCGGAAATTCGGTTGGCAGTTATTTTCTTTCCATTTTATCCACTTCTGCAATGACTCAGGCGAACTAAGGTTCGTGGGTCCCGGAAGACCCATTGAAATG ++ +#1=DFFFFHHHHHFHIJJJJJJJJJJJIJJJJJJJJJJIIIJJJJJIJJJJJJJGIJIJJJIJJHHFFFFFDCEDDDDD=CBDBB@<AC;(8?80989A: +@D7DHSVN1:151:D12V0ACXX:8:1101:21144:1931 1:N:0:CGATGT +NAACTTTTCAACCAAGTCCTTTGACAACAAGTTGGCAACGACCGCGTGATTTCTACAAGAGTCGAAACCATGAACATAGATGAATTTGTACTTTGCTTTAT ++ +#1=BBDDDCFFF;;BFFFIFHICHH@BB8??FD@D=>C@B@3=(;;>(;@3(((,5(5:>AABDA############### +@D7DHSVN1:151:D12V0ACXX:8:1101:21129:1969 1:N:0:CGATGT +NAGGGAAGATACACCCATGCCATATCCATTTTTGACCAGATTTTAAAAGAGGATCCAACTTACCCAGAAGCATTGATTGGAAGAGGGACAGCGTATGCTTT ++ +#1=DDFFFHHGHHIJJJJJJJJIJJJJJJJJJIIGIIJJJIIJJGGIIIJIJJFIJJJJIIJGCHHJIIHFHHHFFFFFDCECEEDDDB@DDD8<@C>CDA +@D7DHSVN1:151:D12V0ACXX:8:1101:21013:1990 1:N:0:CGATGT +NTTGGCGATGCTTTCTCAAAATTTGGGGCTAATGAACAATTGTATTGCCCTCTCCCATTTATCAACAATGTCTGGGGTTCGCCGACCCAGCGGAAAGGCAC ++ +#1=DDFFFHHHHHJJJJJJJJJJJJJJJJJJIJJIIJIHIJJHGIJIGIIIJJJJJJGIIIIIIGIGFHHHHFFDEC>959?BDDDDDABBDDBDBBB### +@D7DHSVN1:151:D12V0ACXX:8:1101:21251:1925 1:N:0:CGATGT +NTGGACTAGGTGGTGAAAAGGGGGTGGGGTCCACAGCTGTTTCGAGGGGTCTTTCAGACTGGTAAATATCACCACTCAAGTAATCAAACGAACCTGCATCA ++ +#1=DDBDABFCFHD@BFHGGIIII0@FGB@G().)6@E;ACH?E?DEC?,'55;;5>:@>@B5:>CDAC3>4+4?39>?AD3>B(:@CC############ +@D7DHSVN1:151:D12V0ACXX:8:1101:1467:2009 1:N:0:CGATGT +GTCATCGTCCTCATCGCATTCCCCTTTTGTGGAACTGTTTCCTTTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAATTTTTAAAAAAAAAGCATCTT ++ +?@@DBDDDFDCDDFDAHIDH@HDFGGHD@CEHH9CDF9DAAGHGG?D@FHECGBGDABBBCCCCBCBBB@BCB############################ +@D7DHSVN1:151:D12V0ACXX:8:1101:1400:2057 1:N:0:CGATGT +CCCAAACTCTGAAAACAGCTCCTTCAGCTTCTCATCATCAATGCTATCATCCAAGTTTTTGATATACAGATTAGCACCCTGATTCTTATCAGCAGCTTCCT ++ +CCCFFFFFHHHHHJIIJIJJJJJJHHIJJJIJJJJJGIIDHGJJJJJGIJJJGHHFHJJJJGIIJJIJJGIJIIIGHHHGHEFFFFFCD@@CCEDDDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:1418:2233 1:N:0:CGATGT +GGGCAAAGTACAAGAAAGTTGGGTCACTGGCGCCATCCTTGTAATAGGCAAAGACGCAAGCACCATCATCATGCATGCTCTCACCGACGAAGATCTGAAAG ++ +@CCFFFFFHHHHHJDHJIHIIJJGHEHIIICHHJBHJJIIJHIJJJJIIIIJIIJJJIHHHEEFFFEDEEEEDCDDDCCCDDDDDDDDDDDDDDDEDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:1728:2015 1:N:0:CGATGT +TTTGGTTTTTCATTGTTACCAGAGTCGGGTTCGGGTATGGCGGGGGCCTGGAGGGGGGGTGGTTTTTTTTGTTTGGTTTTGTTTTTTTGTGTTGTTGGTGG ++ +BCCFFDFFHHHHHJJJJJIJIHHJEHIIJ:C3?FH06BDG=FGD######################################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:1627:2074 1:N:0:CGATGT +GCCTGGTCCGAAGTCAGAAGGGATATTTGAGACGGCTACGAATTTAGGGCATTCAGGTTGGTTTGGTTTTGATATCATGGTTAGACTGCCGAAGAAGTAGC ++ +@??DDDBDHHHDA:C@FFCGGGBC;CDGFG=BGEHIIEFH@BDHIFHCH@FFCGHHG@?EF?DEEC;;@BB7;>CC>9AB-09>ACCCCC +@D7DHSVN1:151:D12V0ACXX:8:1101:1657:2079 1:N:0:CGATGT +TCAGTATCGCTTCGGGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGGATGCTCTCACTCGAA ++ +@@@FDEFDHGFHHE<@CBGGFHEGDB3?BGH*BGGDGHFBFBGEBGGEHGD9CCE?ACCDDA@5>C:A@>CC53=ABAB-9A=ED@EFCCEDCCED@DDBDDBDDDCACDCCDDDDCBDDBBDDACDACDCCA +@D7DHSVN1:151:D12V0ACXX:8:1101:1598:2205 1:N:0:CGATGT +CGGGGGTTTGCTGATGAAATTGAGGGGATTTTGTGTTAAAATGGATCACCTAGGGTTTTGGAAGTTTGTTACTGTGAGGAAAAAGGAACTTGACTTGTTAC ++ +B@CFFFDDHHFHHDFIEHEHHEFGGIIGIHIGGFGCHEHIG@DH;;?ACBDFDCD;;@BB@@@A@CDC?C>@ACD::@?:8CDBD? +@D7DHSVN1:151:D12V0ACXX:8:1101:1665:2216 1:N:0:CGATGT +CTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGTTAGCGCGCAGTTGGGCACCGTAACC ++ +@C@FFFFDHHHHHIIDGHIIIIIIAHGIEGIGGCFHEII>FDEGIGGIIIAGIGHHHFBFD@;AEDBD?CBDDCCACCDDB@BDB>?@CCBDDB@D?ABBA +@D7DHSVN1:151:D12V0ACXX:8:1101:1737:2233 1:N:0:CGATGT +TTCACGGATCATCTCATCGACTTCTTCATCGGTGAGCTTCTCCCCGAGGTTTGTCATCACATGACGTAGCTCAGCAGCTGAGATGAAGCCATTCTGGTCCT ++ +BBBFFFFFHHHHHJJJJJJEIJJIIIG>FHIICDBFHGIIIGJJIEFHIBEEEHHHHHCH>CDEFFABCBCDCCCCADCDAB>ACCCCDDDDDEDDDDCDC +@D7DHSVN1:151:D12V0ACXX:8:1101:1520:2247 1:N:0:CGATGT +GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGCCTTCTGTTTGAAAAAAACCACCGCCACTCTCTCCCCCCTCTCCCCCCG ++ +?==A:DBDACFHFIIIECGEFGFHH?EFDFG>?FDFHIBG?D@D;77)8ACCCCDCD?>ACDD: +@D7DHSVN1:151:D12V0ACXX:8:1101:1966:2247 1:N:0:CGATGT +AGACAAAAGTGCTTGAGCAGAAGAAGAATGAGGGTGAAGAACCAAATCATAAGGAGCCCAAAGCCCATCAACAGGACAAGGTCTACCAGCATCAATCCTGA ++ +@CCFFFFFHDDHFBHFEHIGHIIGIJEIIIIIIJ?DEGI@GGEGGIIGGIIIGHIIHHIIIJJIJEEHGHFFF@BABECDD>@CDDCCCBCDCDDDDDDCC +@D7DHSVN1:151:D12V0ACXX:8:1101:2114:2022 1:N:0:CGATGT +CCACGCTTGAGATCCTTCACAGCAACGTTCTTGACATTGAAACCAACATTGTCACCTGGAAGAGCCTCAGGAAGAGCTTCATGGTGCATCTCCACTGACTT ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJIJJJJJJJJJJJGJJJJIIJJJJJJJJJJJJJJIJJJJIHHHHFFFF>@CEDEDEDDDDDDEDDDDCDDDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:2137:2035 1:N:0:CGATGC +CCCCGCTATCACCGAGAATAATGACTTTCAAAAGAGTTCTCCTTCGCGAGGACATCCTCGCTGGGCTTGCAGTTGCAGAAGTAGAATTCGACCGATCCAGA ++ +BBBFDDFFFHHHHJIJJJJGHHGIHIJJIAGGIDFHBGGIIJGIIIJABH::CBDDDFCCC@B8?ACB@B>:,:A@3>C?CC3:@((4>?38>@00@?BCCDDA@@CDCCACCDB +@D7DHSVN1:151:D12V0ACXX:8:1101:2050:2154 1:N:0:CGATGT +CAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCGGGTCAGAGCGTAAGCTAGTGATGCTTTCGGC ++ +@C@FADADFHGHGGIIGIIJJIJ?FHFHHHGAEHEFIJIGIJJIIEFHIJHGIJIIIIGGAHIIGHHHHFFFABBCCACDBBBBDDDD>CAD@@CEDCBBB +@D7DHSVN1:151:D12V0ACXX:8:1101:2012:2202 1:N:0:CGATGT +GGCGTACAGGTTTGAAATTTGGGAGTTGGGCCATGCAAGAATGAATCAAAAGGAGTGAGTGGGGGAGTCATTATCAAGCACTCTTTCTTTTTTTTGTTTTT ++ +BCCFDFFFHHHHHJIJJIJJIJJGHHIJJJJJJJJJJJJHIIJJJIJJJJJIJCH@FFG@EHIHFAB=CCDEEEDDDDDDDDDDDDDDDDDDDDDBDDDDB +@D7DHSVN1:151:D12V0ACXX:8:1101:2134:2227 1:N:0:CGATGT +CGAACACGACGGGGCTCTCACCCTCTCTGGCGCCCCTTTCCAGGGGACTTGGGCCCGGTCCGCCGCAGAGGACGCTTCTCCAGACTACAATTCGAACAGCG ++ +BBCBDDDDFHFHFHJIJIIHJJJGIJJEFHIAFHIGGCHEHECDEDACDDCCBDDDDBBBBBBDAABBBBDCCD@CCDDDDCDDC:(:??B.;B@C################################ +@D7DHSVN1:151:D12V0ACXX:8:1101:2336:2003 1:N:0:CGATGT +NTGAGGTTTTCGACGTTCTTAGCAAACTTATCCGTAGTGTCAGTGGCAAACAAGTTGGATTTGGTCAGGTCATCGTTTGTTATGGCTTCCCGCTGGCGATA ++ +#4=DDFDEHHHHHJJHIJJJIJJJJJJJJIJJJJHIJIJIIIJHIIJIGIIIIHFHIJFGGIJHHGHHFDDDFEEDCDDDDDEDCDDD<@?:@@<@@B099 +@D7DHSVN1:151:D12V0ACXX:8:1101:2412:2046 1:N:0:CGATGT +GATTTATTCCATGAGCTATTTAGCCAAAATGTGCATCATTTGACCAACATTATGCCTCACAAAGTTCACACTATTGATGTGCATGAGGGTGAAATGGGCAA ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJHJJJJJJJJJJJJJJJJJJJJJJJJJJJJJIIJGHJJJJJJJJJJJJJJJHHHHHDFFBADEEEEDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:2382:2056 1:N:0:CGATGT +CTCGTTTAGAGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGA ++ +=;=:4==BADDB?:A?AAAFBA>>;>;AB############################ +@D7DHSVN1:151:D12V0ACXX:8:1101:2467:2115 1:N:0:CGATGT +GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAACACACATACACGCACTCTATACCACTCTTGC ++ +?@@DFFFFAFHHGGHHIGIIIIIIBHIGHDGHIH?@DH?DBF?################################## +@D7DHSVN1:151:D12V0ACXX:8:1101:2262:2140 1:N:0:CGATGT +TGCGATTTGAAGGTCTAGAAGTTAAGTACCAAAGGCAATAGCACTGATCAATGACACAGGCTACGAAACTCCGTGACTACTGTTAGAAATATAGCCTCTTA ++ +CCCFFFFFHHHHHFFHIJJJJJIJJJEIJJJJJJJJJIJIJJJJJJJJJJJJJJJJJJJJJJJJJJJJJIHHHEFDDFCEEEFDEDDDDDDEEDDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:2307:2170 1:N:0:CGATGT +GTCAGTAGCTAGATATGGATAAGGGGGCATCGAATACATATGGTGAGCTACAACAATAGTTAAAGAACCTAACATAGCTAGGTTAAGCGATAATTGAGCAT ++ +CCCFFFFFHHHHHJJJJJIJJJJJJJJIJJJJIIJJIJJIIJJFIJJJJJJJIJIJJJJJJIJHHHHHFFFFEEEEEEEEDDCDDDDDDBBDDDEDDCDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:2371:2189 1:N:0:CGATGT +CTTACACGTGGCACCATCTTGTACCCCCAAGACATCGTAGAGCGACTTCGTATGAGTAATGGCCGTGGCGCTTGGTGGGGTGTCCACGGTGGATGACACGG ++ +@CCFFFFDHFHHFJJIIIJJJHGIJJJJJJIAGGHIGIGGIIIGEHHIJG=@EHIJCHGHHHFFFBDBDDDBDDDDBBDD5@C####################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:2366:2209 1:N:0:CGATGT +CGGCCCACTTGGAGCTCTCGATTCCGTGGCACGGGTCAACAAAGCAGCCGCGCCATCCTACCTAAAAGTTTGAGAATAGGTCGAGGGCATTGCACCCCCGG ++ +@@@3F@HD31::C####################################################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:2402:2214 1:N:0:CGATGT +CTTGTTCGAAAGATGTAAAGAATCAAGTAGTTGAGTAACTACGTCCTCATTGTTAAAAGGCACATCCAAATTCACCTTAACAACCATATTTTCGAAAGAGT ++ +BCCFDFFFHGFHHJJJHJJJJJJJJJJEHIJJJIJIIJJIJJFHIJJJGIIIIHIJEIIJJIJIJJJJJGIIHFHEHHHFFFFFDDEEEDEEEBDDDDCDC +@D7DHSVN1:151:D12V0ACXX:8:1101:2427:2231 1:N:0:CGATGT +ATCGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCGTCGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCA ++ +CCCFFFFFHHHHHJJJJIJJIJJJIJJJJJJJJJIJJJJJJJJJJJJHHJIJHHFFDEEEEDDDDDBDDDDBDDDDDDDDCBBBD<9ACCC>>A@CAACB@ +@D7DHSVN1:151:D12V0ACXX:8:1101:2653:2019 1:N:0:CGATGT +CTCTGACTCTACTTCGACATTTGATCTAACACCGGCTCTGGAACTCCGAACAATCTGAACTGACTCAGCCTCTGTCACTTCATACATAGTAGAACGTTTTT ++ +CCCFFFFFHHHHGIJJIJJJJJIJIJJJJJIJJIJJJJJJJHIJJJJGEGIJJIIJIGHHGHGFFFFFFDEEEEDDDDDDDCEEDDCDDCCDDDDDBCDDB +@D7DHSVN1:151:D12V0ACXX:8:1101:2530:2059 1:N:0:CGATGT +CTAACCTTTTTGTTGTCCTTAAATACGACAATACCACTTGATGAAACACCAATCAAAACGTTTGTTTTGAACTGATCTTTGGCATCGAAAAATTCCACCCC ++ +@@CFFDDFHHHHHIJJJIIIIJIJEHBEGHEAFGHIJDHGHJIJIIJJJ?HHGIGIFHIIAEHEHHHHFFFDFED;>@ECACCDCC?CDDDDDCDACDDBB +@D7DHSVN1:151:D12V0ACXX:8:1101:2526:2076 1:N:0:CGATGT +CAAACAAGCAGAATATGTCATCTTTCACTGCAAACGACCTGGGGCGAAGAGGGGATTCACCGTCATGAGTAAATGCAAGCTGACCATAATCACCAACGTTG ++ +@?@?DDD>FCDHHGIGBHCHFHFHGCEGEHGIAGHG>DEGIGEBBH<@B7@25?A>C4>>3+(4+:>?>A>CCC>>CC>CA +@D7DHSVN1:151:D12V0ACXX:8:1101:2654:2168 1:N:0:CGATGT +CCGACCCATCAATTCATCTTCTTCGTATACGTCGTCGTTTCCGATATCAAATTCCAAACCCGTGAATATGAATACGAATACGCAAACTTGGCAACCAGGTA ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJIJJIJIJJJJJJIIIJIJJJHHHHFEDDDFEEEEEEEDDDDDDDDDDBDDDDDDDDDDDBAB@@ +@D7DHSVN1:151:D12V0ACXX:8:1101:2532:2242 1:N:0:CGATGT +CTCTGATACAAGAATAGAAACAGCACTGATGGCAGAGAAAACAGCTTTATAGGCAGTCTTCAGAGCTTCATCTAGAGTTACCAAATCCATCTTTAGCAATG ++ +CCCFFFFFHHHHHJJJJJJJJIJJJJJJIJJJJJJJJIIJJJIJJJJJJJJJJJJJGIJJJJIJJJJJJIIIJHHHHHHFFFFFFDEEEEEDDDDCDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:2687:2249 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAATGGGTATTGCGCGTACGCTTCCAACCATA ++ +@@@FFDDAHHGHFEGEIIHHIC@CB5??:??B8:> +@D7DHSVN1:151:D12V0ACXX:8:1101:2909:2147 1:N:0:CGATGT +CTCCGAAGAGAAATCCAGCAGCCTGGTCTTCGTTACCATCAAAAAGCTTGAGAGCTTCGATCACAGCACTCCTTTGAAACCCCAGCTCCACCCCGTTTGCT ++ +CCCFFFFFHHHHHJJJJIIIICHGGI3?DG<3:D=6D*00?DHIJ0?9B;F>28@)B4;6)('7772;@@@C>CE6.535?B################### +@D7DHSVN1:151:D12V0ACXX:8:1101:2877:2172 1:N:0:CGATGT +GGCAGACCTGTCAACCTTTCATAGTTGAGATGGCAAGTGCAACGACGGGGTGTTTGGGCTGCTGTCCGACTGTTCTTGTGGATAAATCTGCCCTGCTAATC ++ +:?,CB9FCBE?:1?CB;>A=8;:?::A:>A>:74:>A>34443:>>?###### +@D7DHSVN1:151:D12V0ACXX:8:1101:2872:2190 1:N:0:CGATGT +CGGTAGATCCCTCGATGACGTCAATAAGGCCATCGGTACCTTTAGCCAAGGAGCAATGATCAATCCAAATATTTGAAGATTGAAATATAGAGATGCCATCT ++ +@@@BBDEFDHHBDFHIGIEDFFGHIGGGGDIIIIII6DHGIIIIBGIIGHI2@GGH;DAGGJGEHHHEEDEFFFFE@CC@CACCC;@@>>C>ACDDDCCC> +@D7DHSVN1:151:D12V0ACXX:8:1101:2881:2226 1:N:0:CGATGT +GCCGAAGGAGCCTAATGAAGATGGACTGAAAGGCATATATAGAGTGGATGTTGAAATTCCTGCAGATGACTGGGTCAATATAACGAAGTTCTATGATGTCC ++ +;@@=D?@1?DCFFADG;>@A5((,(-5>55(>@;BAD +@D7DHSVN1:151:D12V0ACXX:8:1101:2789:2239 1:N:0:CGATGT +ACAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACG ++ +BCCFFDDFGHFHHJJJJJJJJJIJIJIEIJIJJJEIJJJJJJJJJIJJIIIIGIBGHJGHHAHIIJJIJJHHDHFFFFBDDEEEEEEDCDDDDDDDDDDD# +@D7DHSVN1:151:D12V0ACXX:8:1101:2815:2240 1:N:0:CGATGT +GGATGCAAGACATTCAGCAGCAGCTTGTAACATGTCGTCAGTAATCAAGCGAGCACCTGAAAGCAACGCTCCTAAACCAATCCCAGGAAACAGGTACATAT ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJHIJJGIJIJJIIJJIJJIIJJJJJJJJJJIJJJIIJIJHHHFFFDEEECCDDDDDDCAC@BDDDDCB>ACDEEE +@D7DHSVN1:151:D12V0ACXX:8:1101:3184:2005 1:N:0:CGATGT +NAATCGTTGTATGGTGAGACAGTTATCCTGAATCCGTGCTTCATATGGAGTAATATGGATATATCAGGCTCGACAACTTGTCCCTCAACAGCTTGTATGTG ++ +#1=DDFFFGHHHHJJJIIJIJJGIJJIJJJJJJJJJFHIIJJIJJJIJGIGIJJJJJJIJJJIJJIJJJJJFHGFDCEEEEEDDDDDDDDDDCCCADEEDE +@D7DHSVN1:151:D12V0ACXX:8:1101:3120:2036 1:N:0:CGATGT +GTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGTCACACCTT ++ +C@@FFFFFFHHDFIGGGIJFIHGIJEHIAHGHAHIJGGIJJJGGGIJJHIIHIGGHCHIHHEFFDDDEDDDDC?BC3@CDACDDDDCC<@BBBDDDDDBD3 +@D7DHSVN1:151:D12V0ACXX:8:1101:3192:2068 1:N:0:CGATGT +GGTTGAATGGGGGGCCCGCAGGCCGACGCCTTGAGCGCGCAGGTGCCGTGGCACGCTGTAACAGCGCGCGCTGCCTACCACAATCGCGAGGACAGCACTCC ++ +CC@DFFFFHFHGHDDDDDDDDDDDDDDDBDDD@CCCDBD6BDD8@ADD@D@-9ADDDDBDCDDC?>BBDD@>BBBCCDDDDDD@C@D@BBDBBCB?CB:AC +@D7DHSVN1:151:D12V0ACXX:8:1101:3054:2083 1:N:0:CGATGT +GGGAGCTTCGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTACTCCGTGAGTCGGAGGCGGGGCACAGCCCCATTTTTTGGACCCAAGGCCT ++ +CCCFFFFFHHHHHJJJJHIJJJIJJIJJJJJJJJJJJJJHJJJJJJJJJJJJJJJJHHHFFFFDDDDDDDDDBBDDDDDDDDBDDD9@DBBCCD +@D7DHSVN1:151:D12V0ACXX:8:1101:3248:2170 1:N:0:CGATGT +GGGGCCTAACCTTGTTCTTCCACAGGTTATGGTAGGAGGCAGAATCTGCAGCCCTTTGCATGACCTCAACCACAACAAGGTGGTCGGTCAATGGCCTAATA ++ +CCCFFFFFHHHHHIJJJJJJJJJIIJHHIJJJCFHJIIJIIJIJIJJJJJJJJIIJIIIJJIJIJJJGHHHHFFFFDBCDACD?CDD=BDDDDDBDA?CCC +@D7DHSVN1:151:D12V0ACXX:8:1101:3163:2193 1:N:0:CGATGT +CTACGAAGCCCAAGATATAAAAGCCCAGTCCAACGTGGACGCCATGACCACCCTATAATTAATCCGATCATGACGGCGACCCATATTGGTACTGCACATAG ++ +CCCFFFFFHHHHHJJJJJJJJJFHIJIJIIJJJJJHIJIIJIJJIJJJJJJJJIJHHHHHHFFFFFDDDDDDDDDDDDDDDDDCDDEEDDCDDDDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:3237:2212 1:N:0:CGATGT +ATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGATCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCCGGGGC ++ +&00&0@CDC############### +@D7DHSVN1:151:D12V0ACXX:8:1101:3086:2218 1:N:0:CGATGT +GTGGTATTTCACTTGCGCCGAAGCTCCCACTTATGCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCG ++ +@BBFDEFDHHHHHDIJJIJJJIJJIJJJJJJJJIGHGHIJJJIJIJJIJIJJJIJJEIHIIHHHHFFDDDE@CADCDDDDCDCDDD?B5?CDD>CDDCCD5 +@D7DHSVN1:151:D12V0ACXX:8:1101:3169:2238 1:N:0:CGATGT +CTGAGAACACCCTCACCGCTTTCAAAGGTCTCAGGGTGCTGTTAAGCGACAGTGATGACATGAACCGAGCCGTGTCTAAGAAGCTACTCGAGAAACTGGGC ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJGHJJJJJJFHHIJHIIJGIJJJJJGIJJJJJJHHHHHFFDDDDDBDD?CDDDDDDDDDDDDDDDBBDDDCCDD +@D7DHSVN1:151:D12V0ACXX:8:1101:3321:2075 1:N:0:CGATGT +TGGCAAACTATAGAACTTTCCAAACTCACCACCTCCAGGCTTGGGTAGACTGGTGAAGATTCCTTTGAAAGGATGCTCGGAAGCTATAGTAGCAATCTTGC ++ +C@CFFFFFHHHHHJJJJJJJJJJJJJJJJJIJJJJJIJIIJJJJI?FHHIIJJGIJJJIIJJJJJJFGIJCHHGHDFFFCCDDDDDDEDDDDDCDACCDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:3343:2075 1:N:0:CGATGT +GTTAATGCTTCTCCCAATATCGATGCAGCAAATCCAAGCATAGCAACACGACCAACAAAGAGCTCATTTTCCTTGGTGAATCCAATTCCTCCTGATGTTCC ++ +CCCFFFFFHHHHHJJJIJJJJJJ=HIJIIIJJIIJIJJJJJJJGJIJJJIIIJJJJJJJIJHHHHHFFFFFFFEECEDDDFDDDDDCDDDDDDCDDDEDEC +@D7DHSVN1:151:D12V0ACXX:8:1101:3357:2098 1:N:0:CGATGT +GCAATCGGTTGGACAGCTAAGGGAAGTTTCTAATAAGGTCCACAATGCAGAGCTTAAATTATTCTTGGAAGTTGAGCTTGGCGTGGATTTGCGACCTATTC ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJHIJJJJJJJJIJFHIJJJJIJJJJIJJJJJJJJJJJIJJJJGIGHHHGHDDFFFDEDDDDDDDDDDDDDDDDDDE +@D7DHSVN1:151:D12V0ACXX:8:1101:3411:2115 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAACAAACTCTTTAAACTTTTTTCGAAAACAGA ++ +@@@ADFFFFAHDHIIJJGHIGAHHGEIIICGIHHGFGGEBBEHGF;BGGGIIAABCE7;=3.?)6;;@################################# +@D7DHSVN1:151:D12V0ACXX:8:1101:3350:2120 1:N:0:CGATGT +GCTTCTTCGGTTTTCTCTGGAACGACTACCTCTGGGGCAGGAGGGGCTGGGGTCTCAGTCTTTTCTATCTCTGATGGTTTAGACTCAACAGGTTTTTCTTC ++ +@@@FFFDFHFHFHIJGIJJIGGDGHIJGIJIIGCFHIEHEHAFGHIIBHHED3=CCEEDCDEDDCDCDDDCE:ADDCDDBCC>C@ACCCCBB(4>?DDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:3369:2137 1:N:0:CGATGT +CGCAAGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTCGACGCCCGGGGAAGGCCCCAAA ++ +@CCDFFFDHHHHHIIIJJJJJJJJJJJJJJJJJJJJJJHIJJIJJJJJJJJJJJJEIIGHEHAHEHFFFFFCDDDDDDDDBDDDDD9-5<95?BBDDDDDB +@D7DHSVN1:151:D12V0ACXX:8:1101:3348:2146 1:N:0:CGATGT +CTCTATGCATAGCTTGGTATTGGCAGGAACAAACAGGACATCACCCACATGGAGTTTATCTGCAGAGATGCATGTTCTTATTGTTCCCATCCCTTCAGTGC ++ +@@@DDDBD>FFFHGGIIICHFGEHCHIIIDIEHA@FCC?BBCDBHHDGGHGI@B88@HIIG>=@@DECHEF>AEEB@EEECDA@C@C>A>9==CAC@5@C# +@D7DHSVN1:151:D12V0ACXX:8:1101:3442:2156 1:N:0:CGATGT +TGGGAATACGAGTTGGAAGAGCTATTTGACGGGTGAATTCTCCCGGAGGGCAGTGCTCGGGCGTTGGATCACTTAGTTTGAATGTCCTACCATGTCTCTTG ++ +@CCFFFDDHHDFCGHIIIIGIDFIIIIHGGIIGHIIIIIIIIIIBBDDBDA@ACDDCCCA>@@CCCACCD@A?CCCACCCCCC +@D7DHSVN1:151:D12V0ACXX:8:1101:3407:2165 1:N:0:CGATGT +GGGGAAGTTGCTGCTGTTGGAAGTGTAGTCCGATCATTAACTGTGGGACAAGAGGTTTTTGGAGCCTTGCATCCAACTGCTGTAAGGGGCACTTATACGGG ++ +CCCFFFFFHHHHHJJJJJJJJJJEHGIIJJJJHIJJJJIJIJJIIJJGGIIJJIJCEHIJJIFHHHFFFFFFEEEECDDDDDCDEDCBBDBBDDDDCDABD +@D7DHSVN1:151:D12V0ACXX:8:1101:3300:2204 1:N:0:CGATGT +TACCCCTTCTTACCCTGAAAAACAGGGTCACCTTGCGTCCTTGAACCGATAACCATCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCGGGACCAACAAGGG ++ +CCCFFFFFHGHHHJJJJJJJJJJJHHGEFEHIJJGIIGHIGIGIIJJIGIJIJHHHHHHFFDCDDDCDDDCCCDDDDCDDBAADD@?9-09CDDDCDDCD?BB?C +@D7DHSVN1:151:D12V0ACXX:8:1101:3632:2027 1:N:0:CGATGT +AGGAAGCTGTGGTTGTGGTTCTGCCTGCAAGTGCGGCTCCGCTTGCGGAGGGTGCAAGATGTACCCAGACTTGGTAGAGGCTTCAGATAGCCCCAACGTTA ++ +@@@FDDDFHFDFFHIEEGIJFIEGFCGIIEGGHGDAEGHIIJGIAGIEHHBD,5?>CCDDDCDDDDDDABDCC@34>C>84>C>BB?78@>=?=5;>3:5@:B@;>CBB144:4>ACACD +@D7DHSVN1:151:D12V0ACXX:8:1101:3580:2051 1:N:0:CGATGT +GCCTTGTTAACCTAATTACATCTTTCATGATCTTTCAATTCACTGCACACGGGTCTTCTCTTTGCCAAATATTTTTGATTTCAGAGGAAACCGAATTGACG ++ +CCCFFFFFGHHHHJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJFHIJJJJJJJJIIIJJJGIIIJHGHHFFFDFDE?CEEDD?BDDDCDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:3507:2069 1:N:0:CGATGT +CCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCAAGTACCATCAAACAAACTATAACTGATTTAATAGAT ++ +@@@DDDDDFFFFFEEEFIIGCGI9*?GFGFFIFFIIIIIIIIIIEIIIIIFFEFFID@AEEBDDDBB>BCCCCCBBBBBBBBBBBBBBBBABBDB@ADBBA +@D7DHSVN1:151:D12V0ACXX:8:1101:3642:2073 1:N:0:CGATGT +CCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAACATCCGAAAGGACCATCGCAATGCT ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJIJJJJJGGIJJJJIJJIIJJJHHHHHFFFEEDEEEEDCDDDDDDDDDDDD@DDDDDDDDDDDDBDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:3674:2098 1:N:0:CGATGT +CGGGCAACACTCTGAAAATTTCATCAATCGGTTCAAGCATTCCAAGAGCAAGGCAGTGTTTAGTTTAAAAGAAATCATGCTCCAGTAAAATAGCTTGAGAA ++ +@C@DDDDFHHHFHJIJIJH+CFHHGIIHHIIFGHGIEHDGIIGGIHGIIIJIIHIH=C=8CHI7CGG>GIHEEHDDDFFFFEEE?CDA +@D7DHSVN1:151:D12V0ACXX:8:1101:3545:2185 1:N:0:CGATGT +AGCAGTTCCTAGCTCGAGCTATTTCACCATTTTTCATTTCAAACTTGGCATAACGTATCCATGCCCCAACTTTAGGATGGCACTGCACAAACCTCTCATAT ++ +BC@FFDDEHHHFFIIIFHIIIHIJJJJJJGIJJJEIJJJDFEHJJJIGJIJIDGHHIJIIIJGIGGGHGEHHHFHCEDF?BEEEEEEDCDADDDDDDDEDC +@D7DHSVN1:151:D12V0ACXX:8:1101:3876:2014 1:N:0:CGATGT +CTGTGGACATAATCTTCGGTTGTAAGAGGGAAACTGTAGTTGATGACAACTTCAACATCTGGAATATCCAATCCTCTTGCGGCCACATCAGTCGCTATCAA ++ +@@@BB?DDDDAFFFHIIIBHI?D>?BHGGI@FFH@BFCHIGIEEC>CAGGD>CCEAE?A@:7?A/9;8?CC@>5@:@9<@CAC +@D7DHSVN1:151:D12V0ACXX:8:1101:3999:2062 1:N:0:CGATGT +GTATAATTATTATTTTTGCACACGATGCAGACCAAGTTGTCGTGTGCACCATTTCCAACGGGCACATCCTGCATTTAAAAACGAAATTTTTTTTTTTTTTT ++ +CBCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJGHIJJJJ########################################################## +@D7DHSVN1:151:D12V0ACXX:8:1101:3965:2064 1:N:0:CGATGT +AGGAAGTCCAAAACCACCAGCAGCTTCCTTTCCTTGGTCAGGCTCAATAACTACAGGGGTACCTCCAAATGGAGCATCATTTGTTTCTTTAAGCTTTTGGT ++ +@@@FFFDDFHFHFIGIIICDCGEHIIGGIIIJJIIGGGHIGIGHCDGIIGCGFHIIGIIFGIHGHHHFHHHED@C?CCACDEEECC@CCD>A(:CDCDC=A +@D7DHSVN1:151:D12V0ACXX:8:1101:3828:2105 1:N:0:CGATGT +GTCAGTTCCAGAGCCAAAGATCGTAGTTCTCGAACGAGCAGTCGAAAAGATTCTGGAGCATTCTCGGGGTTAGGTATTATTCCCCCAATGATCGTAGTACC ++ +CCCFFDFFHHHHHJJJJJJJJJJJJJJJJJJJJIJJJJJIIGIJIIJJJIIJJJJJJJJHHHHHHFFFD?@DDD>@CDFEEEEDDDDBDDDDDDDDDBDED +@D7DHSVN1:151:D12V0ACXX:8:1101:3956:2129 1:N:0:CGATGT +CAGATTTCAGGCAGATTGGAGCATAAATGTTGTAGATGTCAATGTTTCCTACTTCTTGGGCTGCTTGATCGGCTGCATCCTCACACTCTTCCGAAACAGAA ++ +@@@DFEAEDHDDBBGHIJJGIFGIGHIJJAFCFGHIGJGHIJIDDFIIDEDEFFGHIHGHICFIGGIIJGIJJGHHCDFFFDCC@C?CCCCD@B?@@?;ACEEC@@CDDD328 +@D7DHSVN1:151:D12V0ACXX:8:1101:3859:2214 1:N:0:CGATGT +TTCCACTTCTTGAACTTTCCGCCGTGCTTCTTGCCAAATTTACCATGACCATGCTTGAACTTCCCGCCATGACTATGCTTGAATTTTCCTTGCTTGAATTT ++ +CCCFFFFFHHHHHJJJJJJJJJJJIJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJHHFFFEEEEEEDEEDDDDEDDEDDDCDDDDDDDED +@D7DHSVN1:151:D12V0ACXX:8:1101:3990:2250 1:N:0:CGATGT +GGGAAGACGAACACGCAAGTGGAGTCCCATTCTATGAAGTCTACTACGGTTTCTTATGCTTTGTGCGGTCCTTCCTGTTACTTCAAGCACACTAGCTGCAG ++ +CCCFFFFFHHHGHJJJJJJFIJEGHIJJIGJIJEIIIJJIIJIJJJJII@GHGIJHIJJJHHDCEFDD>ABDDDDDDDDDDCDC@CCCADCDDDCDDCDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:3921:2250 1:N:0:CGATGT +CGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCGACGATGAAGCTTATCCCCCATCGTCTCACTGGCCGACCTTGACCCCTGTTATTTG ++ +@??DD?DDFHDFDHIGGIIIGGDEFHIIIGAEHIIGHIFHII@FEA>AB8<(4>CAA> +@D7DHSVN1:151:D12V0ACXX:8:1101:4196:2020 1:N:0:CGATGT +CGCCAATCCGCCACCACTCAATTTTCCGCCAGCCCTAACCCTAACACGCGCGTATCGGAGCGCGTCTAAGAGAAAGCGCGTTAGATATGGGAGCTGAGATA ++ +CCCFFFFFHGHHHJJJJJJJIJJJJJJIIJJJIJJJJJJJJJJJJJJJJJHFDDDDD@DDDDDDDDDDDDDDDDDDDDDDDDBDCDEEDDBDDDDDDDCDC +@D7DHSVN1:151:D12V0ACXX:8:1101:4153:2062 1:N:0:CGATGT +TTATTTATGAGCTCTTTATATTCCCAAAGAACCTCGAAAGTGGTAAGGGACCATCACCCTTATCGATGTCGCTAATGGAATTCTTGCTTCTAGATCTGTGC ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJIJJJJJJJJJJJGHJHIJJJIJJJJJJJJJJJJJJJJJJJHHGHFFFFEEEEEEDEEDDDDDDDCDDDEDEDA +@D7DHSVN1:151:D12V0ACXX:8:1101:4102:2101 1:N:0:CGATGT +CCGGGAGGTTGGTTGATAGTTAGGGATGATGGCGAGACCATTTCCGAGGTGGAGAAGATGGCCAAGTCACTTCACTGGAAATCGCAGTTTACTTTCTCTAA ++ +@@@DDDDDHDHHDBFFEIICFC>@@5@A@BCC@@32??@8>::@CCDCCCC:A +@D7DHSVN1:151:D12V0ACXX:8:1101:4103:2125 1:N:0:CGATGT +CCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT ++ +CCCFFFFFHHHGGIHIGIJJGIJIEIJGIJJHIIJIJIGIHIIIJIJIIJIJHHHHHHFFFFDDEDEEDEDDD@CCDDDBDDDD5@>9@BBDD??CCCCD@ +@D7DHSVN1:151:D12V0ACXX:8:1101:4021:2132 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAGACGTATAACGGATACGTGATGTGC ++ +B@CFFDDFFHHHHJJJJIIIJJJIIIJIIJJJIIJJJJIHGGHGIJHIGGIJGGGIHFGGGHF:;;@CAB############################### +@D7DHSVN1:151:D12V0ACXX:8:1101:4178:2154 1:N:0:CGATGT +CTGATGCAGCTTTTCTCGACTTTTGCACATGCACAAGTTCAATTTTCAATTTTTGCACCAATGTAGATTTTCCACCAGTGATCATCCATAACTCGCCTAAT ++ +CCCFFFFFHHHHHJJJJJJJJJJJIJJIJJJJJJJJJIJJIJJJJJJJCIIJJJIIIIIJGHIHIJGIJJJJHIJGHHHHHFFFFFFEEEEEEDDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:4209:2174 1:N:0:CGATGT +GCAAGCGAGAACAGTTTTTTCAAGATTTCGCTGAGTCGATGATTAGACTTGCTAGAATTGGTGTGCTCACAGGTACAGAAGGTGAAATTAGGAAGGTTTGT ++ +@@@FDFDD?DHFFECEHEIJHIJJDGHIGIIGAFHG9??BGGEG@CFGGGGHIEF>>DGE3=A?CCFFDC@ACAE@>A;ACB;@CADCCCCA@C?B9>C@B +@D7DHSVN1:151:D12V0ACXX:8:1101:4193:2213 1:N:0:CGATGT +CCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTTCGGGCCTCCACCAGAGTTTCCTCTGGCTTCACTCCGCTCAGGCATAGTTCACCATCTTTCCGG ++ +?;?D?D?=AA?D?E:E:)AFEDBE9)1??@D?D9BDDDDIIA'@1@D=;CDDDD37?AD(6.(6>???################################# +@D7DHSVN1:151:D12V0ACXX:8:1101:4150:2215 1:N:0:CGATGT +AGACCCAAAGTCTGTGTTTAGCTGATCCCCACGAGGAGTCTTCTCCAATTGATTGATCCTCTGTTCCAATTTCTTCAAGTCTTGACTACTCAGAGTCTCCC ++ +CCCFFFFFGHFHHIHIIJIJJJJJJJJJJJJHHGJJJJBGHIHIJIJHIJGIJJHIIJJJJJJJJIJHHHHHHHFFFFFFFEECCEEEDDCDCCDCDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:4040:2236 1:N:0:CGATGT +CTGCTCTTCAATGCCTTCCTTCAAGGTATTTTCTGATAATGGACTTTCATGCATGGGCTCACAACCTTTCGAAACCTTTTCTGTAACTGATGAACCCGAAT ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJCHIIJJJJJIJJJJJIIJJJJJIJJJJJJJJJIJIJJJIJJJJJJIJJJHHHHHFFFFFFFEEEEEEEDDDDBDB +@D7DHSVN1:151:D12V0ACXX:8:1101:4459:2015 1:N:0:CGATGT +CAGCCTTTTCTTTCCCACATAACTGTTCAACTAGTGCAACAGAATATTCCATTGCTGTACCAGGTCCACGACTCGTCACAACTTTACCATCCTGCTGGACC ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJIJIJIJJJJJJJIJIIJJIIJJJJJIJJJJJJBGFIIHHIGIJHHHHFFFDDECEDEDDDDDDCCDC@ABC +@D7DHSVN1:151:D12V0ACXX:8:1101:4254:2021 1:N:0:CGATGT +GTCAATATTGTCTTAGAAGTTCACACTCATTTCACATCCTTGTCACAAGAGCTAGAGTAACATAGTCACCCCTCTAACTTGCCCTTCAAAGTGTACACTAA ++ +@@@?DBDDFFFHHHAFGGDCH<BHCFGDCGHBBCGIEHGGIHECEEHHFHA>DE?)>6>;.;@C@;> +@D7DHSVN1:151:D12V0ACXX:8:1101:4280:2023 1:N:0:CGATGT +TGGGAATGCAGCCCCAAGCGGGCGGTAAATTCCGTCCAAGGCTAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACA ++ +@CCFFFBDHFHHHJJIJHDIHIJIJ@@EHIJIHHHHFFFFDDDECDDEDDDDBDDBBDDDDDBDBBDDDDDDDD:@CADDBD@BD +@D7DHSVN1:151:D12V0ACXX:8:1101:4542:2075 1:N:0:CGATGT +CCGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGC ++ +CCCFFFFFHHHHHIJJJJFHIJJJJJJJJJJJIJJJIIJIJJJJJIJJHHHFFFFFEEEEEEEDDDDDDDDDDDDDCCDDDDDDDDBDDDDDDDDDDDCCD +@D7DHSVN1:151:D12V0ACXX:8:1101:4736:2118 1:N:0:CGATGT +GTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGG ++ +@BCFFFFFGHHHHJJJJJJJJJJJJJJJJJJJJJJJJHIJIJJJJIIJJIGIJJJJJJJJIJJHHFFEEEEEEDDDDDDDDDDDDDDDDDDD?CCDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:4590:2146 1:N:0:CGATGT +AGCGATATTCGGACTTCAAACACTCGATGAAAGAAGCATTAGAGATACCAACACGAAAAAAAAGTACGAGAAAGAAGCTTCTCGTAGATGAATCTTCGGTG ++ +CCCFFFFFHHHHHJIJJJJJIJJJJJJGJIIGIJJJJJJJIJIIIJIJGIIJJJJJIGJJFDDDDDDDDDDDDDDBDDDDDDDD@DDDDDDDEDDDEDDD@ +@D7DHSVN1:151:D12V0ACXX:8:1101:4506:2153 1:N:0:CGATGT +CTCGAAGCCAAAAAATAACAATCCTTCCACAAAAACAAAAGGTAAAATTAGAAAATCTTGTGCAAGACTTCAAATAGTTTTGTAACTTAGAAAAATCAGCT ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJJJJJJFHIIJJJJJJJJJJJJJJJJHHHHHHFFFFFFEEEDFEEDDEEDEEDDDDDDDDDDDDA +@D7DHSVN1:151:D12V0ACXX:8:1101:4725:2205 1:N:0:CGATGT +TTATTGGAAACAAATTGTCACTGATCTTATACAGAATCTTGATTTAGACTAACAGTTCAGTGTTAATTAACTTCAACAATCCATCCTTTCTTGTCTTCAAC ++ +CCCFFFFFHHHHHJJJJIJJJJJJJJJJIJJJJJJJJJJJJJJJJJIJJJJJJJJFHIJJJJJJJJJIIJJGJJJGIJJJJJJJHHHHHFFFFFFFEEEED +@D7DHSVN1:151:D12V0ACXX:8:1101:4612:2250 1:N:0:CGATGT +GTTTATATTTTCACTAAGAAAATAAACAATAGTTAAGGTGCATGATATCAATATAGTTTATCTAAAGTGGAAAGATGAAAAAAGGAATAATATAAAACAAA ++ +C@CFFFFFHHHHGJJJJJJIJJIJJJIJIHIGHIGGIJCGHJJJJJJJJJJJJJJJHHIJJJJIIJJBFGHJIJJHJJIIIIHFFFFFEEEEEEEDCCDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:4863:2020 1:N:0:CGATGT +CCTCCACAAGCGAAGATCCAACTGAATGTCCCTGAGCTTTGTAAAAGGTGAAAATCATTCCTCCACCGAGTAGAAGTACATCGACCTTAGCTAACAATGAC ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJIJJJJJJIJJJJJJJJJJJJJFHIJJJJJJJJJIJJJJJJJFHBEFFFFEECEEEBCDDDDDDDDEDDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:4898:2021 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAGAACCTAACCGTAGACAAGGCATGCC ++ +CC@FFFFFHHHHGJIJJJIJJJGIJIJJJJJJIIJJIJIFGHEEHGHJJJJJJGIGHCHEHHFB?DCFC?############################### +@D7DHSVN1:151:D12V0ACXX:8:1101:4775:2060 1:N:0:CGATGT +TTTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGTTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCA ++ +BCCFFFFFHHFHHJJJJJJJJJJIJJAEBDBDFFFECEDDDDDDDDDBDDDEEDDD5@@D@BDDCDEDDDDDB@BDDDDEDCCDCDACDDD@BCBDACDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:4830:2072 1:N:0:CGATGT +CAAAGTGTTGCCACCATAAATAATGCAGGTACTTATTACAGGAACTTGATCAGCCATATCAAAGTAGGGTCTCCAAAGAAACCGGGAGCGATCGAAACTTA ++ +@@@FFDFFFGGGHIIJIIIEHIIFIJIGICHIJIJJJGHIIJJIJJJIIJJIJIIJIJJJJGGGCGEGGFHHCHCGIGHFHHFFACDDDBDDDBBDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:4848:2072 1:N:0:CGATGT +CGAAATAAGTGACAAGATATGTTACAATCATATCATACATACCCAACACAATGTTAACCAAAGTCATCTATTGATCATCTTCCAAATCTTATCACATATGT ++ +@@@DDFFFHFHHHIJJIIJJIJJJJJJJIIIGJHIJIJJIJJFIJJIIJIJJJEIIIJGDHIJFGIIJIIGIGHGEGIIIHHHHHHDFFFFDEDEDECED: +@D7DHSVN1:151:D12V0ACXX:8:1101:4784:2086 1:N:0:CGATGT +TAGCCGTTGATGATGGAAATGATGCTTCCGGCTCTGGTTTCCACAAGAATACAAGATTTTGGCCTTTCTCTGTGGCGATTGAGTGCAACGGTACAAATGGA ++ +CCCFFFFFHHHHGIJJJJJJIIGIIJJJJJIJJJGIJCHIGGIJJJJJJJJIIJJIIIIIGGIIJHHHHHHFFFFEDDDDBDCACCCCDDDBDBCDDDDCD +@D7DHSVN1:151:D12V0ACXX:8:1101:4914:2086 1:N:0:CGATGT +TGGGACCCAAAACTACTGGGATGTGTTGAGCTGCCGGAACCAATGATGAGAACACCCTGTTGTTTAAGCGAAGAGATTGCTTTGCCCATGTTGTAATGATA ++ +<@@D;DDDFHFDBHIIGHGEFBFEHHG=AHGGGG>FDHHAEGGIEHIIIIFH>FHHAAE=CEDFEEFCCADDDBB<>>@AAA>ACDCAADDDC>@ +@D7DHSVN1:151:D12V0ACXX:8:1101:4839:2092 1:N:0:CGATGT +ATTCATTTCAATTGGCAGTGCAGGTGCTGTCTTGCCCCACAAATGATACACACAACAGCATGTTGCGCCGCGCTACACCAAGATTCATCAAACAAATTGAA ++ +<<<7ADDA8D?AD+AEED:C9+++9AB>9<>@3:GCHGH@BGDFIIFFHEHADFDBC>?>?@88;?@CCCC9>?B?BBBBBB@?B@BBB9@ +@D7DHSVN1:151:D12V0ACXX:8:1101:5967:2174 1:N:0:CGATGT +GCCAAACAGCAAAAGCAAAACAGTAGCACCGACGGACAGCACAACATCGAAAAATTTTCATCGAAAAATTCCTGTCACTACAGCAATACCAACAACCTGCT ++ +@@;DD??DFDHFFDBBHIDHIIEH@H>DHAGDFFGFHHAHAFCHIEGEEEEEH@@EHAACDAABD=BC;?BBBB@?@?BBBBB;<9>9909BCC@?BB<>991?@@## +@D7DHSVN1:151:D12V0ACXX:8:1101:6226:2002 1:N:0:CGATGT +NGCCGTCTTAGAGCAAGTATCCACCGTCGTACCGCCACCACTTACACCACCGTCAACCACCTCTCTTCTTCTACACATGAAGAAGTTTCTACTTCCCAATG ++ +#1=DFDFFHHHHGJJJJHIIJJJJJJIIJJJJJIJIJJJGJGJHJIJJGIJJGHHHHFFFDEEDEEDDDDCDDDDDDDC:@ACDC:>CDDDDCCDCCCDCA +@D7DHSVN1:151:D12V0ACXX:8:1101:6169:2009 1:N:0:CGATGT +CTGCCATGATCACACAACAAAGAGAAGCAACAGACAAAAAGTAAGGCATTCTAGAAACAAGAGGACCTGATAGAAATTCAAGAAAAGCCTACCTGTTCAAG ++ +BCCFFFFFHHHHHJJIJJJJJJIIJJJIJFJGJJJJJJJJJIIIJJJJJJJJIJJJJJJJJGIJJJHHHHFEEFFFFEEEEEEDCDDBDDDDDDDCDDEEC +@D7DHSVN1:151:D12V0ACXX:8:1101:6245:2017 1:N:0:CGATGT +GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAACAAAAAAAAAATAACATGAAGCCTACACCTG ++ +CCCFFFFFHHHHHJIJJHJJJJJJJJJIJJJJIJGAFHDHIIJIJGIIIGIIAGCHHHFGEHF6;?CF@################################ +@D7DHSVN1:151:D12V0ACXX:8:1101:6027:2024 1:N:0:CGATGT +CCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACAGCCGCTCCGCCCAGGCTCACGCCACAGGCTTTGCGG ++ +@@@;A??=C:C@FI>>?EA@AFHADFADFI4C?9?CFC@G<?B?@@@BB14:(285AAC::>CDCC28?(:>?CBBDD<FFFDEGDFFGE==CEEIEIDE>=??;>D;;>;A@3>5=??@A5;: +@D7DHSVN1:151:D12V0ACXX:8:1101:6444:2076 1:N:0:CGATGT +CCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTG ++ +@@CFFDDFHHHFHGHIGIIHIJJJIJGGHIDHGGGHIJJJJEGIGB=BBDDBCFDEBDDCD@ABBDDD@BD?CCC@BCD?CD:CCDDEAC>CCCBCCCACD +@D7DHSVN1:151:D12V0ACXX:8:1101:6457:2115 1:N:0:CGATGT +AGAATATCGAAAGTCGAATACTGTTTAATATGAGGTGGCACATGGCTACGTAGCGCAGCCATCTCCTTAGCCCCGAACAAGAAGGCGTTCGACACGAGGCG ++ +C@CFFFFFGHHDHCFGGIGGIJIJJIIIJIJBCGHEGHBCGIGIJJIJIIBGFCHIIIIHFHFHFFDFEFFDEDD??BD??DDDDDB5 +@D7DHSVN1:151:D12V0ACXX:8:1101:6315:2119 1:N:0:CGATGT +AGATCGGAAGAGCACATGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAACAAGTGACGATGTACAGAAAT ++ +BCCFFFFFHHHHHJJIJJIHIIIJJIJJIGFGIJJJGGGCGGIGGIICC>FHI@FIJJIIJHHH9=BDEC############################### +@D7DHSVN1:151:D12V0ACXX:8:1101:6493:2148 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCCTATGCCGTCTTCTGCTTGAAAAAAAAACAAGTAGACGAAGAGTGGCACAGATTCT ++ +@@@;??B*/.)8=@AFB(@@=?=).?(7@CFA############################### +@D7DHSVN1:151:D12V0ACXX:8:1101:6415:2216 1:N:0:CGATGT +CGGCATTCTGGGAAGAGGCAGCCCCAGCTGATGCAGAAACCAAGCCAAGTGATGCGGAAACCAAAACAAGTGATGCAGAAACCAAGCTGGTTGAAGTGGAA ++ +CCCFFFFFHHHHGJJJIJIJIJJJJJJJJJIIJGIJGIJCHIJGGHIJGCHIIIJJIJHEFEFFDDEDDDCCDDDCDDDDDABDDBDDDDDDDCDDACDCC +@D7DHSVN1:151:D12V0ACXX:8:1101:6343:2230 1:N:0:CGATGT +CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAACA ++ +CCCFFFDEHHHHHJJIJIIIGIIIJJJJJJJJIJJJHIJIGIHJEHHGFHFGHGFFFEFDCCEECEEDDCCCDDDDAABDCDDDCDDCCCDCDDD@?@BCC +@D7DHSVN1:151:D12V0ACXX:8:1101:6602:2051 1:N:0:CGATGT +GACGGGTTCGGGAATGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAAGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCC ++ +CCCFFFDFHHHHHJJJJJIJJJJIG@FHJJJGGIJCHGHGHHJGDEEHECHFFFFFDDD@CEDDDDDDDCDDEEACCBBDDDCDDCA9AA>@CDDEDEDCC +@D7DHSVN1:151:D12V0ACXX:8:1101:6652:2057 1:N:0:CGATGT +CGGCCGGGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCAT ++ +CCCFFFFFFHHHHIHIIIIJJJJJIJIEIJJJJJJJJJJJIJFFFDCCD>DDDDDDBDDBDD0>AA:@A4<:@@>45?CC>@@4@@@33: +@D7DHSVN1:151:D12V0ACXX:8:1101:6504:2079 1:N:0:CGATGT +CTTCTTTTTTCTTTCTTCCTTCATAACATACATTAAGGGTGGGGTACAAAAGAGTAATCAAAAGGATAATAACAACATTTAACTTAGTTAGGAAGTAACAG ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJJJ?FHIJ?FHIIIJJIJ@EHJIJJHHGGFFFFFFEEEEDDDDEEEDDDDDDDEDDDDDCDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:6743:2121 1:N:0:CGATGT +GCCGAATCAACTAGCCCCGAAAATGGATGGCGCTTAAGCGCGTGACCTATACCCGGCCGTCGGGGCAAGTACCAGGCCCCGATGAGTAGGAGGGCGCGGCG ++ +CCCFFFFFHHHHFJJJJJJGIJJJJJIJJJIIIIJIIGEIGIGHEFFFFFFEEECBDDD?BBDDDB>BBACDDCCB<8@DB09@CC:@@AAC9>59>@D<@ +@D7DHSVN1:151:D12V0ACXX:8:1101:6617:2136 1:N:0:CGATGT +CCGATCACAAGAAAAGTACTAAAATTGACTGAGACCGAAATCAAACAGGAAAGTATGATGAAAACCAGAACTTGTGGTGTATAATTAAAAGAAAAAACATC ++ +??<7;D6BBDD+A2A;AEEFB>B??E@6DADB>=5;>:B>B>B5:>>A????>>7<3: +@D7DHSVN1:151:D12V0ACXX:8:1101:6666:2142 1:N:0:CGATGT +CCCATACATGGCATCATGGCGGCCTCTAGGCCCCCACAAGTTATGGCCCCATGTGATGTTATTGGCATAGCCAATAACATGATACATAGGGAAATTGCTAG ++ +@@?DDDDFHFHHDIJJJIGGGEGGAFBFH@DGHIJBHHICEHGCAGEGHFEEC>DBBCEE;;A3;>5@@>ACACC:AC@;@CA@ADEA:@BCDB>CCCC:> +@D7DHSVN1:151:D12V0ACXX:8:1101:6572:2145 1:N:0:CGATGT +TGGAAGGCCAGTTTTCAAATGATGATGGGACGGAGCTGGTACGTTTAGCTTCAAGATGTTTGCAATATGAGCCCTGTGAGCGAGCAAATCCCAGGTCATTG ++ +CCCDDFFFHHGHHIIIJJJJJJIIHIJJJGGIIGHIJIJFGGHBGGGIGHIJGGGGGIGJJJJHHFHHGFFFFFD@;;@A?@DBDBDDDDDDCDDCCCCCC +@D7DHSVN1:151:D12V0ACXX:8:1101:6581:2180 1:N:0:CGATGT +GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGATCAGAAAAGTAAAGATACACGAACAA ++ +CCCFFFFFHHHGHJJIJIJJJIIJJJJJJHIHIJJGIJHGFIJIGCHIJJJJAHGIGHHHHHE>CFFFB################################ +@D7DHSVN1:151:D12V0ACXX:8:1101:6606:2233 1:N:0:CGATGT +CGGTGGCGCGTGGTGGAGAAGCGCGTTAGGACCTCCTGAAGGGTTGATAAAAAGCATGTTGTGTGGGTTTTGATTATTACTATTATTACTATTATTATGAG ++ +BCCDFFFFHHHHHEGIIJJJJJJJJJJJJJJJJJJJJJIJHHHADFFFEEEEEDDDDDDEDCDCDDD@@DDDBDDEDEEDDEEEEEEEDDEEEEEDDD>>> +@D7DHSVN1:151:D12V0ACXX:8:1101:6826:2009 1:N:0:CGATGT +CGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGATCAGCACTCGGTCCTCCGGATTTTCATGGGCCGCCGGGGGCGCACCGG ++ +CCCFFFFFHHHGHJJJJJJJIJJJJJJJIIIGHIIJJJGHGGEGIGIJHFBDDCDECDDDDDDDBBDDDDDD@>@@CDCECCBBBDDBBBDBBDDBBBDDB +@D7DHSVN1:151:D12V0ACXX:8:1101:6938:2010 1:N:0:CGATGT +CTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAAGA ++ +CCCFFFFFHHHHHJJIJJJJJJJJJIJIJJIJJJJJJJGGJJJJIIJIIJJJJJIGGIGHFDEEEEEDDDDDDDDDDCCCDDDDDDDDDDDCCCDDDDCDC +@D7DHSVN1:151:D12V0ACXX:8:1101:6885:2038 1:N:0:CGATGT +CCTAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGA ++ +C@CDFFFFHGHHHJJHIIJIJJJJJJJJJIJIJDGIIJIIIGEFHIIIJJIIJJJIJJJJEIIJHGHHEFFEDDA@ACDDDDB9;A>@DD>>@C;>@CCCBBB?@5@@B@B>B888ACC@CCCDC## +@D7DHSVN1:151:D12V0ACXX:8:1101:6988:2214 1:N:0:CGATGT +CATAGCGACTTGGTATACTGGCAAGACGAGTGTATAACAATTGCTTTGACAAGCGGTTACAAGTCTCAACAGTGGGTGGCTCTTGGATGAATTCCTTGTTT ++ +CCCFFFFFHHHHHFHIJJJJJJJJJIJJHJHHFHIJIJJJIJJJJJJJJJIIJJJJHIIHHHHHHFFFFFFECEEC?BDDDDDDDDDDCCDEDDDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:6905:2222 1:N:0:CGATGT +GCTGCGAATAGCATAACCCATTTTTTTCCTTTTCCGGGTAAAATCCAAACCCTGATTCACTAATCGCATATCCATCCTAAAATAGAAACCCCCACCAAACC ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJIHIJJJJJJJJ@GIJJJJJJJJJHHHHFFFFFFFEEEEDDDDDDDEDDDDDDDDDEDDDDDDD@BDDDDDDDDB +@D7DHSVN1:151:D12V0ACXX:8:1101:7033:2023 1:N:0:CGATGT +TCACTTCTTTCGGGGCTAACAAACCCAGCTTTAACGTTCATGATGGCAGCAGATTGCATGAGAGAAGCTGGGCCGCCGGCTGGGGTCCGGCCCAAAACGGC ++ +@@@FFFFFHGFH>@@FHGIIIIIIII=DHIHIIGHIBGHGHGIGIIIGHIIIHIICHIEEEHCHEDFD@A@BCC;=BBCB<@BBB558<>999288815?9 +@D7DHSVN1:151:D12V0ACXX:8:1101:7103:2029 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAATATACAATCGTCAGATCTGGAAGGACCA ++ +@CCFFFFFHHHGGIJJJJIJJJJJJIIJIIIJHIJIGGIDHGHFGIHAEGGIIHJIFEHEFHFFDC:BA################################ +@D7DHSVN1:151:D12V0ACXX:8:1101:7218:2035 1:N:0:CGATGT +CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATT ++ +@@CDDFDFHHHHHJJGJIIJJJIIIGIIIHIG*BGIJIIJHIJJIFHIIIIIIGHIJJJIIHFFDE@EECDDDDDBB@DDDDDCDDDECDEDDDD@@ACCC +@D7DHSVN1:151:D12V0ACXX:8:1101:7059:2090 1:N:0:CGATGT +GTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGATCTAAAGGATCGTTAGGCCA ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJIJJJJJJJJIJIBFHIJJJJJJJJJJJJGJJJJJHHHHHHFFFFFCDDDDDEDDDDDDDDDDDDDCCD< +@D7DHSVN1:151:D12V0ACXX:8:1101:7032:2090 1:N:0:CGATGT +CATCATAATCCATAGTGGTTTCATTTATGTCCTTTCCATCTTGAATCACGTCTCCATCGAAATCTGGATCCGTCACTTCTGGATCTTCGTTAGGGTCAGTA ++ +CCCFFFFFHHHHHJJIIJIIJJJJJJJJIGJJJJJJJJJJJJJGIIJJIIIJJJJGIJJIGIJJJJJIJJIJJJIHHGHHHFFFFFFECCEDBDBCCDDC@ +@D7DHSVN1:151:D12V0ACXX:8:1101:7104:2096 1:N:0:CGATGT +GCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGC ++ +CCCFFFFFGHHGHGGIIJJJJIGIJJIJIJJIGGBFGIJGJIJGGIIJIJIJJIJIGHFHFFDDDDDDDDDDDDDB?CDDDDCDA<>B>?CCE@CCB?C@CCCA@:>CCC>>>ACC77A>CACCCCCCB8<A4:9994389+(9:>@ +@D7DHSVN1:151:D12V0ACXX:8:1101:7208:2190 1:N:0:CGATGT +GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGCGAACGGCTCAAGGCGAAGCGGAAGCG ++ +@@@DFDDDFHHHHIHHIFGIIGGFHGGIJFFGIJHADHGIADDHJAGGF@GI;B=D7AEE>EH>@#################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:7014:2200 1:N:0:CGATGT +CACCAAATGCGACAAATGCAAATTCTCCTCCAGGAGCCAGAAGAAGACCAGTTCTGATTGCAGATATTGTTGAAAGACCGAAAATTTTTCCAACTAAAGTG ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJIJJJJJJIJIJJJJIJJIJJJIJJJJJJJJJJJJHHHHHHGFFFFFEEDDDBDDDDDDDDEDDDDDDD>> +@D7DHSVN1:151:D12V0ACXX:8:1101:7169:2228 1:N:0:CGATGT +TCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGCGTCCTAAAAGTAACAT ++ +CCCFFFFFHHHHHJJIJJJJJJJJJJJJIJIJJJJJJJJJJJJJJGHHHFFFDBEDDDDDDDDDDEDEDEDDDDCDCCDDDDDDDDDDDDCDDDDACCDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:7428:2050 1:N:0:CGATGT +AGCTTGAATCACCTCGCCTTCAATCCATTTTCGCGATCCATCAGGATTAACCTGAACATGACCAAAGAATCTAACAGGGAACACAACATCATGTCTTGCAA ++ +CCCFFFFFHHHHHJJJIJJJJJJJJIJJJJJJGIJJJJJJIJIIJJJJJJJJIJJIJJJHHFHHFFFFEEEEEEEDDDBDDDDDDDBDDDDDDDDEDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:7312:2064 1:N:0:CGATGT +CACTAATTCAAAGACTCATTTTTACAAATCATTCGATTTTAAGTGTTAAAAAAAAGCTCATCGTCTTCTTCAACCTTGACCTGATCCAAACTCGAATCGAT ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJIJIJJJJJJJJIJJIIJJJIJJJJIJIJJJJJJJHHHHFFFFFFFEDEEEDDDDCDDDDCCDDDDADC@DB? +@D7DHSVN1:151:D12V0ACXX:8:1101:7407:2064 1:N:0:CGATGT +GGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTTCGGGCC ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJIJJDGIIJJJJJHJIJJJJJJJHHFFFFDEEDDEEEDDDDDDDDBBBDDDEDDCDDBDDDD@BBB@ +@D7DHSVN1:151:D12V0ACXX:8:1101:7273:2103 1:N:0:CGATGT +AATTCACCAAGAAACTGTAGGAATCCTCAGCTACAAATTGATCATTTATGTTGGTGAAGTCAGAAGAAGTATTCGTGTAAGAGAAGCCTACTCCAATCGGA ++ +CCCFFFFFHHHHHJJJJIJJJJJJJJJJJJJJJJJJJJJJIJJIJJJIIIIHIJIJIJJJIIJIIGIIJ@FHIIIJHHHHGHHFFFFFEDEEEDDDDDDBB +@D7DHSVN1:151:D12V0ACXX:8:1101:7339:2104 1:N:0:CGATGT +TGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGTCACACC ++ +?<@A::0ADFFF>FFF@CFFIEHHBG>:?@@CDEGEGG@FFI9;BC@FFCFIF@FC@EA7?:<>??BBAB;;>?B99@3>B>AABAAABB@5>9(3:>>B@ +@D7DHSVN1:151:D12V0ACXX:8:1101:7347:2122 1:N:0:CGATGT +ATGCTCATCACCTCCAAGAGGAACCACCTAACCTAATCACCTCTTCTGCGCCGCTATCTTTGTTATACCCTCTTTCTGCACCGGCATCACCCTTCTGATCA ++ +@@@FFFDFHHFHHHIIIIEGHA?FGCGBFHGHIIDGIIGIGGIGGIIIIBDHEIGGHHHHFFCDDEDEDEEDDCDCDACDDCBBDBBDDD?B><8AA>8;005&8<>?############### +@D7DHSVN1:151:D12V0ACXX:8:1101:7280:2183 1:N:0:CGATGT +TTTGGATCTAGCTCGCCTGTTTTGGAACCAATTGTAGACATTTGTCTCAGAGATTTGGCCGTGTTGGGATAACTGGGCGGTGATTTCTTTGATCTTCTGCT ++ +CCCFFFFFHHHHHJIGGJJJJJJJGJJJJJJIJJCDAIIIIJJGIJJIGHIJDGGHGHJHIBHIHGGFDDFFEEDCDDD=0;9=?=@CC<:A +@D7DHSVN1:151:D12V0ACXX:8:1101:7442:2243 1:N:0:CGATGT +CTGGACATCTCTAACAGCAGCTTGCTCCACAATGTTCCTCACAAGGAACCTCTTGATTGCCTTGTCCTTAGGGCAACATTAGGCACAATTTGAACAACGGA ++ +?@@?DD:;DFBFFFEFIDEFAGIFBFH@FEGEFFFIFFIIIIFI@DFFECFFIFECGAE4BFGICFGEEC;).7??ADDDDDDCCCCBBBBABB>:?BBBB +@D7DHSVN1:151:D12V0ACXX:8:1101:7666:2062 1:N:0:CGATGT +AGTCCCTTGACCAGTCTCACCTTGTGTTCCATACGAAGGTTGGTTCCCACCAGCATAGCCAGCAGTGAACCCATAGCTTTGCTGATGATTGTACCCAGATT ++ +CCCFFFFFHHHHHJJJIJGJJIJIIIGIIJIJIJJJJIJBGGIGGGIJJJJJJIJIJJIJJJJJIHHHGHHFEFEECEEDDDDCCDDEFDDD@CDDDD?DD +@D7DHSVN1:151:D12V0ACXX:8:1101:7566:2075 1:N:0:CGATGT +GCATTTTGCTGAGGTTGAGAATGGGATATAGAGGGAGATTAAGAAGAGGGTTAGGATAAAGAGGGTGGAATTTGAGGGTTGTTTTGGAGTTTGCATAGTGT ++ +CCCFFFFFHHHHHJFHIIJIJJJJJGGIJJIGIJJGHGIJJJJHIJIJJJBFHHIIJJJJJIJJJ;ADBDCEEEECED?ADBDDDBDCDCAACDCDDDCDD +@D7DHSVN1:151:D12V0ACXX:8:1101:7710:2082 1:N:0:CGATGT +TTTGATTCCTTTGAACATTCTACTTTAGAGTCTTCCATTGATGACAATGTTGATGATCGTTTTACGACAGAAGAACGATTGGAAAAGGTGAGGTGGATAAT ++ +CCCFFFFFHGHHHJJJJIJJJJJJJJIJJIHGIJIJJJJJIJJJJIIJIJIJJJJIIJIBGHJJJJFJJIJJJIIEHEFFEFDECEDDCACBD5?################################ +@D7DHSVN1:151:D12V0ACXX:8:1101:7910:2046 1:N:0:CGATGT +GTCCCTGTTAATCATTACTCCGATCCACTTGTTACTTCTATCTACATGCTCCGCTCCGCCCCGCCCAAATTGCACTCCACACAGCCAGAGCAGTAAGGAAA ++ +CBCFFFFFHHGHHJJJJIIJJJJJJJIJJJIJJJJJJIJIJJJIJJJJJIJJJJJJJJJJJHFFDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDCDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:7884:2079 1:N:0:CGATGT +TCTCATTATATCTTACAATCAACTCACAACCGAGCAAAAGCCTTACCGCTCTCACTTCCCTTGCCAAGAAATGGGTAGTCAGTATATCCCACAACAGGATC ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJIJJJJJJJIJJJJJIJJJJJJJJJJJJJJHHHHHFFFFEEEEEDCDDEEDCDDEEEDDDDBDDDDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:7937:2130 1:N:0:CGATGT +CTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGATCAGCACTCGGTCCTCCGGATTTT ++ +CCCFFFFFHHHHHJJJJJJJFIJJJIHJIIJIJGIJJJGIJJGICHIJIIGGIIJ@FGGCHIHCGGCEFDDDDD@9BCDDCDDDDDDB?BBDCC<@<>BAA +@D7DHSVN1:151:D12V0ACXX:8:1101:7876:2133 1:N:0:CGATGT +GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAACAACAACTAGACCATAGCCACCACCATA ++ +??@DD>+????:C>EFEAFBC>@ACF?@EFCG4D6?6?BBF4?BA;B8.B;A;B############################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:7991:2141 1:N:0:CGATGT +CACCACCACTGGAATGTACCATTTTGCACAATTGTCAATAAATGTTTGGATTCTCGCCTTTCGACTCTGAGCCTCTTCTACAAGACTGACCATCCTCGCCA ++ +CCCFFFFDFHHHHIJIFEJIGIJIIIJJJJIIJIHIGIJIIJIJGIJGIHIIHHIHIGIJJJIHGIJJJHHHHHFEFEFDEECC>C@ADDDCDDBCDBDD< +@D7DHSVN1:151:D12V0ACXX:8:1101:7971:2185 1:N:0:CGATGT +ATGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGATCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGA ++ +CCCFFFFFHHHHHIJJJJJJJJJJJJJJJJIJJJJJJGHIJJJJJJJJFEDDDEDDDDDDDDDDDDDDDDDBDDDDEDDDDDDDDDDDDDDDDDDDDDDD3 +@D7DHSVN1:151:D12V0ACXX:8:1101:7957:2233 1:N:0:CGATGT +GAAAAAAGCTAAGAGCTTCCCTTTTATTATTCTGAAAATTAAGTAATCAACAATAAATAGCAATGTTTCAATCGTTATTGTACCACAACTATAATGGCATA ++ +BCCFFFFFHHGHFHIIIJJJJIGGIEHHEHHHIGJJIGIGIJIGGIIIJJJJJJJJJJJJJIJJJDHIIJJIEHHEEHFFFFFFFECDDDDDDDFDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:8021:2004 1:N:0:CGATGT +NCGAGATCTTGGGGGCAACACCGATGACAAGTGCGACGTTGGTGCTAGTTGACGCCTCTACCAAGTCTGGGTACATCTTGCACCCTCCGCAACCGGAGCCG ++ +#4=DFFFFHHHHHJJIIJJJJJJJIIJIIIIGIIJIJJIJHHEFFFFFFEEEEDDDDDDDDDDDDCDEDDDA>ACDDDDDDDDDDDDDDDDDDDDDDDDD9 +@D7DHSVN1:151:D12V0ACXX:8:1101:8181:2113 1:N:0:CGATGT +GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGGAAAAACATCCAAGTCTCCAAGCGCATCACTACACCTC ++ +?@@D;ADD??;<B?F0)09*0**/-7CFC3A'5(5@EHDHEE(;;@################################## +@D7DHSVN1:151:D12V0ACXX:8:1101:8027:2118 1:N:0:CGATGT +CCGGGCGTCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCTTGCGGATGTTAACGCAA ++ +CCCFFFFFHHGFGJJHJJJJJJJJIJIIIIGIJIIJIJJJJHHADEFFDDDDBDDCDDDDEDDCCBDBDCCCC@A<>BA??BB25<7?CACD:>:@A4 +@D7DHSVN1:151:D12V0ACXX:8:1101:8130:2186 1:N:0:CGATGT +GTTCCATCAACCTAGTATCATCTATATAAACCTCAGGCATCCATTGACTGCAAAACAAGTGAGCAAACTCAGCAGACTCATCACTTCCAGCACCTCCTATC ++ +CBCFFFFFHGHHHJJHIJJJJJJJJJJIJJJJJJJJJIJJJJJJJJGIJJJJJJJJJJIGGIIJIJJJIJJJJJJIHHHHHFFFFFFDEEEDEDDDDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:8151:2219 1:N:0:CGATGT +CGCCAATCATTATTTTTGTGGTGTAATCAATAAGAGAACAAGATCAGGAGAAAGAAGAAGATAAAACGCAAAAGTATATAAACAATGGCGTCCAATTCTCC ++ +@@@BDABDCFFFDDFFFE>C>>>;CCBCC@A>DC@CC@ +@D7DHSVN1:151:D12V0ACXX:8:1101:8265:2028 1:N:0:CGATGT +CAGTTTGCACGGCAACATTAATATTCACATTGTGATACTGGCGTATACAGTCATTGGTCCATGAACTGTTGCATTCCGGAACTTTCCTAAGAGCCAGAGCA ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJIJJJJJIJJJJJJJJJJIJIIJJJFHJJJIJHJJJJJJGJJJHGGHHHFFFFFDDDDDDDDDDDDDDDDDDDDCC +@D7DHSVN1:151:D12V0ACXX:8:1101:8485:2037 1:N:0:CGATGT +GCGGAGAACTAAGACTCTGTTTGGTTTTGGGGAAAACATTTTTAATTGAAAATCAATTTCAAGTGCAAATAAAAATTAAAAATTTTCCTTTGTTTGGTTCA ++ +BCCFDFFFHHDHHHHIJJJJJIJJJJJIIGGIFHIIGIIJJJJIIJJJFIJJJIJJJIIIJIJHHHHHHHFFFFFFEDEEEEDDDDDDDDDDDDCDDBDD@ +@D7DHSVN1:151:D12V0ACXX:8:1101:8475:2058 1:N:0:CGATGT +GCAGGCAATTTCTCGGATATTACCTTTATTTTTTAAAATTAGTATCTGGCACATTGGGTGATGCGAGTGCAGCCTCTGGAGTAACGATTAGCAGGAGAAGC ++ +CCCFFFFFHHHHHJJJFIGHJJJIJJJEGJJJJIIJJIJJIGIIJIJJIJJJIJIIIJIJIJJIJEHEEFFFCDEEEDDDDCDDDDDDDDDCCDB@BDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:8366:2081 1:N:0:CGATGT +TGTTGCTCTGAGAGGGATACAAGATTGTTCCTCTTGATTTGGTTTATGCCTTCAACTGCTGCTGCTACTACGAATGCCCAACAACTTCCACATCTGCCTTG ++ +CC@FFFFFHHHHFIJJIIIIJJJJJJJJJGIIGIJJJIJJGJDFGEHIIIJJIJJJIIIJJIJIGJDHIGGIIHHHGHEFFFCBCEACDACCDDDCCDDCD +@D7DHSVN1:151:D12V0ACXX:8:1101:8462:2162 1:N:0:CGATGT +CTGAGGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTTCG ++ +CCCDFFFFHHHHHJJJIJJJIJJJJJJIHIIGGGIJFFHIIEIIIIHIJIIJIHGHFDCEDEEDDDDCCCDDDDDBDDDDDDCCDCDBDDDCCCCDDDD9@ +@D7DHSVN1:151:D12V0ACXX:8:1101:8386:2173 1:N:0:CGATGT +TCGAATTCACCAGAAAGATGCCTTTTCACAAATGTAGTTTTTCCTGTACCGCCATCACCGACAAGAACAAGCTTAAAACTCGGATAATTAACCGTTTGCTG ++ +@@@FFFFDHHFHHIIIEDFHGGIIIIIIIIIIIIIGGGGHHI>BG>GHGGHEG>HEHGIGIIFFC@?;;CABECEACCCCCBBBB@CCDDCCCB??CBCC: +@D7DHSVN1:151:D12V0ACXX:8:1101:8451:2184 1:N:0:CGATGT +GCGGCGGCGACGACGACACCGTGGTCCAAAGGCGAGAAATCTACGGCAATGGCCGTATTTACGACATATCTCATCGTTATCACCCTGATTTACCTGCATTT ++ +CCCFFFFFHHHHHJGFFFDDDBDDBDDDDDDD@DBDBDDCACDDDDD@BCAC@CD@DDDEEEDDDDDDEDEDDDDDDDDDDEDDDDDCDDEDDDCDDDDED +@D7DHSVN1:151:D12V0ACXX:8:1101:8462:2214 1:N:0:CGATGT +GTCCTACACATCTAAGGACAAATGGGGTGTGATGGTGTATTGTTAATAGTGCTGACAGGTTTTATTGTTGGAGTTGATCTATGTCCGTTGAGCTCGGCAAA ++ +CCCFFFFFHHHHHJIJJJJIJJIJJJJBFFHFIIJFHFEIIIFHHIJJJHIJJJHIJJJ@GGIAHGGIEHH>CEDDCEEFCCCEFEDDDD=CACDDDB7B8 +@D7DHSVN1:151:D12V0ACXX:8:1101:8651:2005 1:N:0:CGATGT +NGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAGAAGCAATAGACTACCTTCAGGGAGTCATG ++ +#1=BDDFFDHDDDIIJJJGIGIJJJJJIJJIEDHEGDHBBDGHEGGGIGHEHI8;CEEHAHCD###################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:8713:2028 1:N:0:CGATGT +TGAAAATGATCGAAAATTAACAAGATTTTGAATTATCTAAACAATTTAACTCAAACCTATGAAGGTAAAGATTTTCACGAGGATAAACCAAAACGATCGCT ++ +CCCFFFFFHHHHHJJJJJJJIJJJJJJJJIJJJJJJJJJJJJJJIJJJJJJJJJJJIJJJIJJJGHHJJIJJGJJHHHGGFEDCEECDDDDDDDBDDBDDA +@D7DHSVN1:151:D12V0ACXX:8:1101:8631:2087 1:N:0:CGATGT +GCAATTACCAACAATATCTTCAATGATATGCATGTGAAGCCATATGCTTTCAGCCTGAGTCGACACAACTCCTCCTGGTCGAAGAGCTCTAGCAATAGACT ++ +@C@FFFFDFDHHHGIGHIIJHHIJGIIEGIJDIGGIJJIIIIJJJIIJJJJJJDGIIJJIGIGGGIIJIJJHHHHEFDCEDDDDDDCCCDCCCDDDDDCDD +@D7DHSVN1:151:D12V0ACXX:8:1101:8719:2196 1:N:0:CGATGT +CTCCGCCTTACAGCCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGACGTCATCCCCACCTTCCT ++ +CCCFFFFFHHHHHJJJJJJJJJJJIJJIGIJJJIJJJJJJJJJJJJJIJJJJJJJJJJJJJJJJJFHHHHFFFEECDDDDDDDDDDDDDDDDDDDDDDDD> +@D7DHSVN1:151:D12V0ACXX:8:1101:8512:2242 1:N:0:CGATGT +CTATAATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAATTA ++ +CCCFFFFFHHHHHJJJJJJJJJJJHIJJJJJIJJJHIIJIJJJIJJJJHJJJIIJJIJJJJJJJJIJJJHJJJJJHHFFDDBDDDDDDDDDDDDBDBDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:8971:2011 1:N:0:CGATGT +CCAACGTTTCGTTTCCTCAGCCAACTTTTCTTTAGCCTTTTCCCAGAGTGTTTTAGCATCTCCTTTTTCAGGAAGAGAGTTGACATGAAGAAAGAACGGTC ++ +@@@BDDDDHHFDCFEHBFFFH@FGHHIGGGIIIIIBGEHIIFBD9?BHDEHGEGIIII@DHGD;CDGHE@=CC;??EDBCDEECCCC@AACC?;?AC#### +@D7DHSVN1:151:D12V0ACXX:8:1101:8897:2016 1:N:0:CGATGT +TAGAGGGAAAAAAGAATGGCAAACTCCTCTTTAAGAGGTTCACCCATTCTCTTTTAGCAGAATCAGCATTTAACTTCCTTGAGACCATGGGCAAAGTACAA ++ +@B@DDDDDHHHHHHIIIJJIJIIJGIIIFEIJFHIJJIBGHJHIIDGHIGGIHJIGEGGHIEIIHFHCHHFBDFFFDCC@;A>BCBDCDCBDDDDDDDDDA +@D7DHSVN1:151:D12V0ACXX:8:1101:8795:2075 1:N:0:CGATGT +CTTTAAATACGCCAAGGAACATGGAAGAGAGAGGGTGTCTGCAATACACAAAGCAAATATCATGCAGAAAACTGATGGTCTTTTTCTCAAGTGCTGCAGGG ++ +CCCFFFFFHHHHHJJJJJJJIJJJJJJIIIJJIJJFGHIJJJJJJJJIJJJIJJJJJIJJHHHHHHHFFFFFDEEEEDDDDDDDDDDDEDDEDDEDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:8970:2106 1:N:0:CGATGT +GGCGAGAGTAACGAATAGGAACAACCTTAACATCATCAAGAACAGGACCACACATGGATCCTTGAACAGTCATGGTATAGAAGGAGCTGATGAATCCGATC ++ +@@CFDFFFDDHHDIJIIIIJJJJJJJGIJJJIIJIJIJJJJGGGHJJJFIJJIJJIIJIJHHHHDHFFFBDFEEECCCDDDDDD;BDBDDD@BD@@DDBDCDD@@## +@D7DHSVN1:151:D12V0ACXX:8:1101:8802:2207 1:N:0:CGATGT +ATAGAATCCCGAAGTGATGCTGGAAGTGGCACGACATCTGGTGGTACGTATCTTACAATTAGAAGGGATATCGCTACTGTCGTAAATGCCAATAGTGTACC ++ +=?1AD>D8BCD8C:<<<2,CED<@9*08B6BB6).=6AD===ADIADDA;=5?@DD6;1@=8>AB>8(5>>A########## +@D7DHSVN1:151:D12V0ACXX:8:1101:8937:2238 1:N:0:CGATGT +GTAAAAGAGAATGCCTTTATTCAAAGCATGAGCATAATCATGATCAGCCGTAGTGAATGGAATCCCACAAAGTAGCATAGTAAGAAACAAGGGTGCCATAA ++ +B@@FFFFFHHHHHJJJJJJJJJJJJIIIGGEIJGIIJJIIJGIJJJIJJIHGIFGDGHJGJJJJJJIJJIIHEEHCHHFFDEFFFEEEDDDB?,;?ACCCC +@D7DHSVN1:151:D12V0ACXX:8:1101:9059:2004 1:N:0:CGATGT +NTAAACTTTTAATTGAACACTTGGTATGCATGTTTATCATCCTACATTAATTCAAATTAACTCCCTCAAATACTAACAAAGCTAATGTTTCACAATCATTA ++ +#1BDFFFFHHGHHJIJJJJJJIJJIJIJJJIIIJJIJJJJJJJJJJJJJJJJJJJJJJJIJJJJJJJJIJIIIJJIJJIHJHHHEHHEFFFFFFEEEEEEE +@D7DHSVN1:151:D12V0ACXX:8:1101:9148:2013 1:N:0:CGATGT +GCTTCATATGGTACACATTTATCTGGACATCTCATTCAAAGATTTATTTGCAAAAGAAAGACTACTACTAATCAAACTACAACGACTAGACAGACTAATAA ++ +@@@B?=A?DBD2AEBFGBHEI@BH@9FHCABEBHCEAHIIGF<=DCHGGHE'5=>A;;;>;A=ACCC@C +@D7DHSVN1:151:D12V0ACXX:8:1101:9019:2072 1:N:0:CGATGT +GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAATGACAATTGACCTAGTATAAGAAAACCACGA ++ +@@@FDDFBFHHFDFFGGAGHGEHGGIHHHBCDDH@GHI9BG?8DDFHH)BCF4;DG>>E@>;7(;@7@@################################ +@D7DHSVN1:151:D12V0ACXX:8:1101:9113:2084 1:N:0:CGATGT +TTAAAGTATTAACTAATAGAGGAGTAATATTAGACAACCCGTCTTTTCTCTTTTTTTTTTCACAAATAGGAAATTTTGAATCCAATTCAGATATCAGAAGG ++ +CCCFFFEFHHHHHJJJJJJJJJHIEHJIIJJIJJJJJJJJJHJJJJJJJJJJJJJJIHFDECEEDDCDDDDDCDDCCDDDDDDDDDDCDDDDCEDEDCDD< +@D7DHSVN1:151:D12V0ACXX:8:1101:9080:2092 1:N:0:CGATGT +TGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGCTTGGGGCTGCATTCCCA ++ +CCCFFFFFHHHHHJJJJJJJJJJJJGHJJJIJJJJJJJJJIIIIJIJJIIJHHEFFEEEDEEEDCDDDDDDDDDDDEDDDDDDDDD?DDDDBDDCDEDEDD +@D7DHSVN1:151:D12V0ACXX:8:1101:9030:2107 1:N:0:CGATGT +CGGGTCGAATGGGGGGCCCACTGGCCGACGCCTGGAGCGCGCAGGTGCCGAGGCACGCTGTGACAGCGCGCGCTGACTACCACAATCGCGAGGACAGCACT ++ +B@CF?DDDFHHFDHIDDDDDDBDBDDBBD5BD?AABB<@BDBB@B2@CDBDB@BBBBCCCDDCDDBDCB?<99>B??8ACB4 +@D7DHSVN1:151:D12V0ACXX:8:1101:9052:2137 1:N:0:CGATGT +ATAAAGTATAGGCCGCCTGAGAAAACAGCAACGAAAGATTCTATAACTAAAAATATAAAATAAAAAATGACGACGTCTACTCGAGCGACGACCTTCCTAGC ++ +BCCFFFEFFHHHHJJJJJJJJIJJJIEIGIJJJJJJJIEHIJIIIGIJGGIGGGGIJJIGIIJGFFFFFEECDDDBBDDDEDDDDDDDDDDBDDDDDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:9064:2188 1:N:0:CGATGT +GGAAGAACTAGAAGATTCCACCTCTGGAAAGCGCCTACACCTAATGGCTTAAGCCGCTGTTCCCATTTCCTCGCTGACCCATCATGCAAAAGGTACGCCGT ++ +@C@FFFFFHHHHAGIIIGIGIBHGGIIGIECGGHIIIIIIIIIIIIIIIIEIGGIEFHHHHHG3=BCD@BCDC>@>>CCBB:CA>>>CCC?C<@@CBBB@B +@D7DHSVN1:151:D12V0ACXX:8:1101:9174:2191 1:N:0:CGATGT +GGCATAATACATGGATCATGGTCAAGCAAGTGGCGACCTCATCAACCGTAACACGCTCAGGCTGCAGCATAGATATCACACGGGGATCATAAGTAGGAAGT ++ +CCCFFFFFHDHFHIJJJJIIIIJJJJJJIIFHGIJGIJJJAHIIJJJIGIIGIJJJHHHFFFFFDD@CEDDDDEEECDDDDDDDBDDBDDDD@>CCDDCDD +@D7DHSVN1:151:D12V0ACXX:8:1101:9080:2243 1:N:0:CGATGT +CTCAGGTGGAATTTCTCTGACAACGCCGAGCATGGAGTCATATTCCTCATCTTTACGTGCGTATTTCTTCCTGAGAGCCTTCTCGAATTCAATCTCATCAA ++ +@@@DDF?DHDHFHJIJHIIGJJIJGIIIAGGHGGIIIEGGIJIJIGGEHGHHIIIJIHFFF?BBCDDEEDDDC@CCDDDCDDDDB@AC@@CDEDDCDDDCC +@D7DHSVN1:151:D12V0ACXX:8:1101:9497:2005 1:N:0:CGATGT +NCACTCATCACTAAGATAGCCAATGGTGAAGACAACAAATAACTACATAGCCGCTTTTGTTCACAATGATGAAGAAACAATAACATAGCAGTCAAGTTGAC ++ +#4=DDFFFHHHHHIIIIJJFIJJIJJC>EHFHIJJJJJIIJJIHIIIJJJJJJIIJIJJJJJJJEHIJIGHHHHGBDFFFCEEEEDDDCDDCCDDCDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:9403:2025 1:N:0:CGATGT +CATCGATCACTATACATTTCAAAACCATTCTCACATAACACAACGAAAAATCAGGAATGATACAAAAGAGAAAATGTGCATTATAGAGAGTTCAACGAACC ++ +?@@DD?A=CFDH?GHFCBFHIIGBHIEEEE?EGIIIEFFHHIEF@DDFHABFH>@GCHFFCHIHIEID?ECEDEEEE@BDEE@CD;@@;?CAC@>@;188> +@D7DHSVN1:151:D12V0ACXX:8:1101:9301:2041 1:N:0:CGATGT +CTTTTTTCTGTAACTGCACAAAAATAGCTAATACACCAACATAATTTCTCTATGTATAAACCATATGTAGAACAAGTTTAACAAGTGACCTTCCATTGCTG ++ +BCCFFFFFDFHHFIJIIIIHIJJJJIEIGIGGGIIGE?BDHHGCGHGIIJGIHIFGJIECHIJGIEE=DGGHIGFF?EHHFFFEC@CCCECEDD@DDCCC: +@D7DHSVN1:151:D12V0ACXX:8:1101:9358:2074 1:N:0:CGATGT +CGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCT ++ +CCCFFFFFFHHHHJJJIJJJJJJJJJJJJJHIHIIJJJJJJJJ6CEHEHHEHEHFFEDECECCCCDDD=@BDCC@CCACCA:?B@>3::> +@D7DHSVN1:151:D12V0ACXX:8:1101:9406:2075 1:N:0:CGATGT +CACAACTTAGCCCTTATTTTTCAGTATCTGTTGTAGAAACCCGTATCAACCTGCACATCTTCCCCGATTTTAAGCGAAGAAAAAGCTTGTGCAGCAATAAG ++ +CCCFFFFFGHHHHJJJJJJJJJJJHIIJJJHIIJJJJIJIIJJFHIJJJJIJJJIJIHIIJJJIIJIHHHHFFFFABDDDDDDDBDDDCACDEDDDCCDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:9408:2130 1:N:0:CGATGT +CAGTTTAGAGTGACATGACGCACCGTGCGCCCGTTGTACATTAGAATTTGCCATATAAAAAAAGAAAAAAAGGCTTGGGACACACAAAAAAGGCCAGGTAG ++ +BBCDFFFFHHFHHJJJJJJJIJJJJHIJJIJJJHIJHGIJJJIJJJJJJJJJJJJJIIJHHFDDDDDDDDDBDDDDDDDDDDDDDDBDDDDBBBBDDDAC@ +@D7DHSVN1:151:D12V0ACXX:8:1101:9373:2154 1:N:0:CGATGT +TCGACGGATCGCACGGCCTTTGCGCTGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTGACGGGG ++ +@@@DD6C5@C@@>>CA>C>8?3:;CDA?CCCCC@BBB@A<8(:@CC########## +@D7DHSVN1:151:D12V0ACXX:8:1101:9439:2167 1:N:0:CGATGT +GAACCGTCTTTATTAAAATACAACTCCTTGGCCATGGCATTGGTGTTTGTGGAGCGTGGTTTTCTGAAAGCCACATTTTGTCTTCTGGTGGAAGAAATGGA ++ +@;7?BACC@BAAA@@BAAAAB::?@9(559<>>>@ +@D7DHSVN1:151:D12V0ACXX:8:1101:9454:2181 1:N:0:CGATGT +GGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGCTTGGGGCTGCATTCCCAAACAACCCGACTCGGCGACAGCGCCTCATGGTGCGACAGG ++ +CCCFFFFFHHHHHGHJJJJJJJJJJJJJJJJJJJJJJJIIJJJJIJHHHFFFDDEEEDEDDDDDDDDDDDDDDDDDDDDDDDDDDDBDDDDDCDCB@DDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:9482:2191 1:N:0:CGATGT +CGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG ++ +CCCFFFFFHHHHHJJJJJJJIJJJJJJJJJJJGHJDHIJIJJIJIJJJHIJJJJJJJIJHHHHHFFFFEDEEDDDDDDDDDEFEEDDDDDDDDDDDDDEE@ +@D7DHSVN1:151:D12V0ACXX:8:1101:9269:2205 1:N:0:CGATGT +CGCCGGCAGAAGGAGCAAGACGACCGGTGCACACCGAAAGGCGGACCGGTCGGCCCACCCCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAAT ++ +CCCFFFFFHHGHHJJJJJJEIJJJJJJGIIIIJJJHHHFFECDDDDDDD:@DDDDDDDBBDBDBBCCDDDDCDDDDBDDDDDDBDDDDDDDDDDDCDCDD> +@D7DHSVN1:151:D12V0ACXX:8:1101:9310:2208 1:N:0:CGATGT +GTCCAGTTGTCATTTCAGATTTGAGTTCTCATCGAGGTCCTTACAAGTGGTGTCGGCTGCGAACACCAGCACCCTGCCTGACGCGTCCGCTGGCCTCGTTG ++ +CCCFFFFFHHHHHJJJJJJJJJJIJIJIJJJJJJJJJHGJJIJJJIGGHIDFDGGGGEHEEHIGHFFFDCDEDDBCABCC?CB@D@BBBD7@B@B>A9?<3 +@D7DHSVN1:151:D12V0ACXX:8:1101:9274:2238 1:N:0:CGATGT +TAAGGGTAGATTGGTCATATCCCATTGAGGATTTTATTTCATTTGAGAAAAGACCGAACAAGTAGGCTGCTCCTGCTACTGACATTATCAATAGCGAGGCG ++ +BCCFFFDDHHHHHJHIIJIJJJJJJIIIJJIJJJJJJJJIJJJJHGIJEHJFHHJJJJJJJJHIFHHBEFFFFFEECEEEDDDDDDDEDEDDEDDDDDBB> +@D7DHSVN1:151:D12V0ACXX:8:1101:9542:2010 1:N:0:CGATGT +CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTC ++ +@@@BDADD?FHF:;FDEHGGII>FHHG1?0@DFF9?DBFGE?CG@GEADEHF?2?BCBBCCDCCCCCCA=5;A@CCA@AA@CCCCBCBCCCC>CCC>@C:> +@D7DHSVN1:151:D12V0ACXX:8:1101:9697:2022 1:N:0:CGATGT +TGAAGATAAATTAAAGGAAAGTCAAGCTGTTGTTCGTACTTACCTTCAGAATTTCCATCTGGAAAAAAAATGAGTCTTCTGTTTCTTTTTTCAAATTCATA ++ +CCCFFFFFHHHHHJJJJJJJJHIJJJJIIHJIGIJJIJJJJJJJJJJGGHIJJJJJIJJJJJJIJJJJHFFEEECACEDDDEDDDDDDDDDDCDCDDDDEC +@D7DHSVN1:151:D12V0ACXX:8:1101:9543:2051 1:N:0:CGATGT +GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAGAGTAATGAAAACATCCTTGGCCAATGCTTTCG ++ +@@@DDDFDDBFBFEGEGFGEF>FHIBF?C::CFEFGII??9BGIEEC###################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:9599:2055 1:N:0:CGATGT +GCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCC ++ +CCCFFFFFHHHHHJJJJIIJIJJJJJJJIGIJJJIIIIJJJJJIJJIJJIJIIIJJJJJJJGHHHFDFCBDDBBD@DDBDCDDDDCBDDD5>B??ACCACC>@CBDCD9AC>CC@CACCACCADDCC +@D7DHSVN1:151:D12V0ACXX:8:1101:9735:2074 1:N:0:CGATGT +TTCCATAGATTATAGTTGAACTGTGAAGACTTGACAAAGTCATGCCGGTAGAAATAGTACTCGACTTACCGATAAATTAGGCAAAAATATCACTCCCTCAG ++ +@@@DDDDAHHDBAHDFGGH@F?BACCC;5@CBBCB?CCBC>ACCBCCB9 +@D7DHSVN1:151:D12V0ACXX:8:1101:9674:2091 1:N:0:CGATGT +GGCACGTGCCCTTGGGGGACTAATCCCCTACTGCAGGTCGGCAATCGGGCGGCGGGCACACGCGTCACTTCTGGCCCGGATTCTGACTTAGAGGCGTTCAG ++ +@CCFFFEFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJGIJJJJJJJHHHFDDDDDDDDDDDDCDDDDDDDDDACC?@BB############################### +@D7DHSVN1:151:D12V0ACXX:8:1101:9715:2144 1:N:0:CGATGT +CCGCTATTTTGCCTCTTGGCTTCGAAAGCAGCCCCGTCGTTGAGCATGTCCTGAGCATCGGCTTCCATCCCTAGTTTGGATAGTGCCAGAGCCTGCAAATA ++ +@@@FFFFFFHHGHJJGGGEGIIGGEGGGIHAGGIJH@FHHGIEFBFFHFDFGCDAGCCEFDFDACCCEDDDC>?@@C>?>CC>A33@A>?BC?????:@A@ +@D7DHSVN1:151:D12V0ACXX:8:1101:9521:2161 1:N:0:CGATGT +ATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTC ++ +CCCFFFFFHHHHGJJJJJJJJJJJJIIGIJIGJJGHGGIJJIIJIJJJJIIJIJIIJJJIJJJHEDDFFFDCDDDABCDCEEDCDDCCDABDCCDDDDDDB +@D7DHSVN1:151:D12V0ACXX:8:1101:9881:2029 1:N:0:CGATGT +CTACTTTTTAATATGTTCTTCACCTCCATTCAACTACAAATCTCTATAGAACTCTTATTCCATGAATCCATAAACCGTTTATGAAGATCATCACAATAAAC ++ +CCCFFFFFHHHHHJJIIJJJJJJJJJJIJJJJJJJJJJJIJJJJJIJJJJJJJJJJJIJJIIHIJJJJJJJJJJJIHIJJHHHHHGEFFFFFFEEEEEECC +@D7DHSVN1:151:D12V0ACXX:8:1101:9898:2074 1:N:0:CGATGT +CGGATTTGGACCGTTCCGCATCCGACCGAGGCGCATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCC ++ +@CCDDFFFHHHHHJJJJJJIJIJIIJJIEHIDIHHFFDDDDDDDDDDDDDDBDDDDDDDDDD;CCCCA +@D7DHSVN1:151:D12V0ACXX:8:1101:9837:2076 1:N:0:CGATGT +GCGGCACTTTCCCTCTCTTGTTTTCGCAAAAACGGTCCAACATAAACTTGCTTATCATTCAAAAGCATACCATTAAGTTTCTCTATAGCCTTCTGGGCAGA ++ +CCCFFFFFHHHHHJJJJJJJHIJJIGJJJJJJJIJIIJJJJJIJJJJIJIJJJJJJJJJHHHHHHFFFFFEEEEEEDADDEDDDEDFDDDDDDDDCCBCDB +@D7DHSVN1:151:D12V0ACXX:8:1101:9927:2116 1:N:0:CGATGT +CCTGCTGCTAACCCGTATTGTGTTGCATTTGCCCTTCGAATAACTTCATCGAGGTCCCTGAATTTCAAGATAGATTGAACGGGGCCAAAGATCTCGTCCTG ++ +CCCFFFFFHHGHHJJGIJJJHIIIJJIJJJIJJJJJJJJJJJIJIJIJJJIIJJHIJIJJJIJJJJJHHHHHHFFEFFFFDDDDDDDDDDDDDEDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:9811:2118 1:N:0:CGATGT +TTTTTTTTTAAATAGAAAGGAAACAAGTGATATTATAAGTCCAAATAAGATTTAAAATACAGCATAATAATATAGAACTAGCACAAAATACAAGACTCGCA ++ +CCCFFFFFHDHFFGGJJIJJIJIIIHI9DDEGGIGGIIIHIIJJJEIGIHIIJIJIIIGFHGDDEFCCFFDEDECEEDDDDDDDDDDDDDCCCCDDCDDB> +@D7DHSVN1:151:D12V0ACXX:8:1101:9841:2161 1:N:0:CGATGT +GCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTAGAACAGAAGGGTAAAAGCTCGTTTGATTCTGA ++ +B@@FFDDFHHHHHIIGJJIIJJJJJJIJI3CBFGHJJJFGGGIIGIJIJIJIIHIIGIIHHHFHHBDBDCEACCEDCDDD9?ACAAB@>@>DDDD>CDDED +@D7DHSVN1:151:D12V0ACXX:8:1101:9932:2188 1:N:0:CGATGT +GCAGATGTAACAGGATCAGAGAAATCTCCTCCAGGAGGGGAAACAGCACCAACAATGGTGACACTGCCATTGCGTTCAGGACCACCAAGACACTTCACTTT ++ +CCCFFFFDHHHHHJJJJJJJJFIJJJJJJGJJJIJIJJJJIJIEIGIJJJJJJIJIIJGHHHHHHFFFFFFEEDDDDDDDDDDDDDDDDDDDDCDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:9869:2218 1:N:0:CGATGT +CCGACCCTTTTAACAAAACCCGGGTCAGCCCGTGAGTAGAACCCGGCATTGACAGCAGACCCACCACCGAGAACCCGAGCACGAGCATTGGCAACCCCATC ++ +@;==AEGE8BD;@666=;5=AAAB?BA<<800&54<&))095(00-054A::C3@BB@@CC@CCCDACDDDCCACC@?CC +@D7DHSVN1:151:D12V0ACXX:8:1101:9996:2244 1:N:0:CGATGT +CTGAGAATTAGATAATTCCCTTGGCCTCCGTAAATTCATGGACTGAGAACGTCTAAGAGATCCATTTTGGAGCCTTTCAACCATTAAGCTAGTCACAGAAT ++ +CCCFFFFFHHHHHJJJJJJJJIJJJJJJJIACGIJJJJJJJIJJJIJJJJJIJJJJJJIIIJJJJIJJJIIGHFHHFFDFFFDEEEEDDDDDDDEDDDCDC +@D7DHSVN1:151:D12V0ACXX:8:1101:10086:2003 1:N:0:CGATGT +NCTGATGGAACACAAGGCTGTTTTAGTTGGTCTGCATTGCTTCTGAGTGATAATTGTCTAATTCAGCATCTAACTGCTCAGCTGATACCACCTTCTCGCCA ++ +#1:ADD?BFFBFHGEDHIIIEFGDFCHEHG?GHGHIEFHECFBH94?D@BFB8?DFFFHGHIIGEIHEHIIIIAEDAEEAA;C;@DEDCCCCCCCCC;;;1 +@D7DHSVN1:151:D12V0ACXX:8:1101:10207:2005 1:N:0:CGATGT +NTTCGCTTTCAAGCGTGAAAGTCCAAAATCACACACCTTCACAGTGTACTTTTTATCAACCAAAAGATTTGGAGACTTGAGATCGCGATGAACGATGGGTG ++ +#4=DDFFFHHHHGIJHIIJJJHIJJIJJJJGIIJJJJJJJJJJJHIIIIIJJJJGIGIIIGIJJCIGHFHHEEFFBDEEEEDEDBDDDDBDCDDDBD@B>> +@D7DHSVN1:151:D12V0ACXX:8:1101:10080:2078 1:N:0:CGATGT +TTCACAATGTCACTAACCTTATCAACCGTGTCTGGCTTTGCAGCACAAGAGATCTGCAAGCGAAGAGGCATCCAGAGCTTTGGGGTGCTAGTCCTCAAGAA ++ +@@@DDBDDHBFDHCEHIEIIGGEC>?EACC?E?:?39??DE*BBFEACCGF;?FGGBFIIA=5ABBEE=BB;@CEC@AC>;@5;:8/?C@>>@A@>:>:A3 +@D7DHSVN1:151:D12V0ACXX:8:1101:10029:2185 1:N:0:CGATGT +TTCCTCTTTTATATGCATGCCTCTCTTTGCAAATGTTCCGACATGATAATACGTTAAGTCCCAAATCGCTTGGGTTGAATTCCTTCAACAAGCATTGTCCT ++ +CCCFFFFFHHGHHHIIJJJJJJJIJJJJJJJJJJJGJJJIGIEIJJJIJJJJJJJJJJJJIJ=FBCCGIJIHHHFDEEEEEEEEDDDDDDDDDDDCDEEDC +@D7DHSVN1:151:D12V0ACXX:8:1101:10065:2189 1:N:0:CGATGT +AGCATTTACGAGCGGTGATTATGGACAAAAATAAGTTACTCAGCTATATATCAAACACTATAAAATTGTTACATCTCCTACAACTTACACAAGTAAATTTT ++ +CCCFFFFFHHHHHJJFHIJJIJJJIJJJJJJJJIJIIJJJJJIJJJJJJJJJJJJIJJIJJJJIJJHHHFHHHFFFFFFEEEEEDDCDDDDDDCCDDEEAA +@D7DHSVN1:151:D12V0ACXX:8:1101:10026:2209 1:N:0:CGATGT +TCCCTTCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATGGTGTCTGAGCTCTCAACCTCAAGGGTGATGGTCTTCCCAGTCAGGGTCTTCACAAAGATC ++ +CCCFFFFFHHHHHJJJIJJJJJJJJJIJJFIJJJJJIJJJIJDFFGIJDIHIIIJJJJJJJJJIII;@FHIIGGGGHIHHHEFFFFD?CAC@@CDDDDDD@ +@D7DHSVN1:151:D12V0ACXX:8:1101:10065:2216 1:N:0:CGATGT +TTTCCGAAGATCTAAAGGATCGTTAGGCCACGCTTTCACGGTTCGTATTCGTACTGAAAATCAGAATCAAACGAGCTTTTACCCTTCTGTTCTACACGAGA ++ +CCCFFDFFHHHHHIIIJIIJJIIJJJJJJJJIJIJJGIJJJGGIIGHJJJJHIJHHHHHHDFFFFFEEEEEEBDDBDDDDDDCDDDDDDEDDEEDDDDDD@ +@D7DHSVN1:151:D12V0ACXX:8:1101:10157:2234 1:N:0:CGATGT +GTCGCCAGCGCAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACAGGCAAAGCCCGCATCGACCTTTTATCTAATAAATGCATCCCTTC ++ +?@@=DDDFFAAFFFFFGEGDGBGGIIHGBFFGG@FAFHIIIICHFFEECED@BDFCECA@BB@?CBB?B@BBBCBB@CCCCCAAA@@CACCAACECCBCCC +@D7DHSVN1:151:D12V0ACXX:8:1101:10215:2236 1:N:0:CGATGT +CGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCATTGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAA ++ +@B@FFFFFCFFFFHIJIJIJIGIJIJEGIIJJJJFGIHHIIFHGGHIIFECHEGGGIICHHFFHEH@DFFEFEEEECEDCCDBDD=ACDCDEDCDDB>@B? +@D7DHSVN1:151:D12V0ACXX:8:1101:10438:2004 1:N:0:CGATGT +NGTGACACTGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAATCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAA ++ +#1:DDFFDHHHHHJJJJIIJJJEGHIJJIIIJJJJJJJJIJJFJIJFHIJJJJJIGIJJJJJHHGHFFD;BD:;;;?B>@?@CCCCCDDDDDDCDCC:BDDDBCCCCEDCBBBBBFBDBBBBBBBBBBBB@> +@D7DHSVN1:151:D12V0ACXX:8:1101:10408:2017 1:N:0:CGATGT +GCCGAAAAGAACAATGCTCCGGTATAAATTGAGCCATCCGATACTTGGTCCTTGTGCATCCTTGTTCGAAAGAACACAGTCATTGCTATGAGAGCCATTAT ++ +CCCFFFFFHGGHHJJJJJJJJJFHIJJIJJGHIIIIJJJJJJJJJJJJJIJJJJEHJJHHHHHHFFFFDEDDC?ACDDDCDDEEDDDDEDCCCCDDDDDDE +@D7DHSVN1:151:D12V0ACXX:8:1101:10388:2097 1:N:0:CGATGT +GCATAGGCTATCATCCGATCGTAGTAGACCCCGATTCTTTTGTTGGGGTTGTGGGTTTGGAGAGTGACTTGGAAGAGTGACGTCAGCTGGGTTGTACCACT ++ +CCCFFFFFHHHHHJJJJIJJJHEHHIGEHIIJIFHIJIJJJFDHGIII@EGEHHFCC@C@@C>ACBB5@@CDBDDBC>ACD??>9>CDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:10476:2103 1:N:0:CGATGT +GGACTGAAAGATGGTTCGGGTGTCATATGCTCCTTGTGTAACAAACTTCCTCTCGAATTTGTCCAAGAACTCCAAGTATAACAGATCTTCGGAAGAAAGTG ++ +CC@FFFFFHHGDHJFFHGJI?FGHCIIGGGIJIJIJIHIDDCHDGFDGIJIIJJACDHJHGJDHGIGEHHEHFFEFFDEEDEEECDDEDED@BBBBDCDAC +@D7DHSVN1:151:D12V0ACXX:8:1101:10423:2118 1:N:0:CGATGT +ACTGAATCTCCTACCAATCAACCTCTTTGCATCAAAGACAGTGTTGATAGGGTTCATAGCGACTTGATTCTTGGCCGCATCGCCGATGAGACGTTCGGTGT ++ +CCCFFFFFHHHHHJJJIJJJJJJJJJJJIJIJJJIJJGIJJGGIIJJJJJJJDHGIJJIIJAGHGJHJJHHHHHHFFDDDDDDDDBDDCDCCB@BBDD285 +@D7DHSVN1:151:D12V0ACXX:8:1101:10612:2008 1:N:0:CGATGT +TCAGATCATCAATTACAATAGCTCGTTCTCCTGCTTCCACGGCACCAACATGCATCTCCATTTTATCGGTTCCATATTCCAATGTTTACTCTTCCGAAATT ++ +CCCFFFFFHHHHHIJJJJIIJJJJJJJIHJIIJJJJJJJJJIIIIJJIJJIJJJIJJJJGIJJJIHHHGEFFEDECCEEEECDCCCDDDC@CCCCB?BBDC +@D7DHSVN1:151:D12V0ACXX:8:1101:10664:2055 1:N:0:CGATGT +CTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT ++ +CCCFFFFFHHHHHJJIJHIJJHIIJIJJJJJJJIJJJJJJDHIIJJIJJJJJJGHJGIJIJJIJJIIIHHFFFDDDCDDDDBDDDDDCDB@@DDDBBBBD9 +@D7DHSVN1:151:D12V0ACXX:8:1101:10721:2059 1:N:0:CGATGT +CCCGAGGCCCCCGCCGACATCTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGATGCTCGCGCA ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJIJJJJHHHHHFFFFDEDDDDDDDDDDDDDDDDDBD@BDDDDDDDDDDEDDDDDBBDDEDDDDDDDEDDDDBB@B< +@D7DHSVN1:151:D12V0ACXX:8:1101:10594:2091 1:N:0:CGATGT +CTTCCGTGGCCTAGAAGGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA ++ +BCCFFFDFHHHHGHIIIIJJIGJHFHIJFIIJJJJIIIIFGIGIFGHGGHEHGIIIIJIIHHFEFFFEEEEEEDD@BDBDDDD:?CCCBBDDDDDDDDDD< +@D7DHSVN1:151:D12V0ACXX:8:1101:10726:2093 1:N:0:CGATGT +AGGCCATTGACTCTCATGTTTAGCAATACAGAATCAAGCATCTTCCCCCCGACGTTCTCGAAATAAATGTCAATCCCATCTGGAAAGTACCTCCTCAAGGC ++ +@BCFFFFFHHHHHJJJJJJJJIJJJJJJIHHHIIIJJIIJJJJJJJJJJJJJJJHHHHFFFFDDEEEEDFEEEEDCDDDDDDDDDDDDDDDDDDDDDCCC< +@D7DHSVN1:151:D12V0ACXX:8:1101:10635:2169 1:N:0:CGATGT +CTTGAAGAGAAGCAGAATGTAAAAACTCAAGGTACTTCAATCTCTGCTCCTCATTGCTTTCCACCAATTGATCTTCAACTCTGGAGTTAATTTCCGCCATC ++ +CCCFFFFFHGHHHJJJJJJIIJJJJJJJJJJJEGGHJJJJJJJIJJJJJJJJJJJJJJJJJCHIJJJJJJJJJJJJJJHHHHHHFFC3?@DEEEEDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:10631:2229 1:N:0:CGATGT +CCAGCCAAGCTGTACCTGCTGCATGTTCAGTCGTCACAATGGCTATCATGGGACTTACTATCGCCTCCTTCTGGGGCACTGGTCGTCGCATCAGAGATCTT ++ +CCCFFFFFHHHHHIJJJJJJJJJJIJJIJJJJJJJJJJJJJJJJJJJIJJIJBHIJJJJJJJJJIJJHHHHHFEFFDDDDDDCCDDDDDDDDCCCDDDDEA +@D7DHSVN1:151:D12V0ACXX:8:1101:10742:2236 1:N:0:CGATGT +TCCCCATGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCATTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGT ++ +CCCFFFFFHHHHHGIJJJJCHIJJJIIJIJJJJJJIIJJJJJJIJGIGIJJJJIGIHJFIHHEHHFHDFFFDDCEECDBD;?@CDDDDDDBD?CDDDDDD@ +@D7DHSVN1:151:D12V0ACXX:8:1101:10719:2244 1:N:0:CGATGT +CGCCGCTAGGAGGCATACACAGATTGACATTCCGCCGAGATACCATGGCACCTTGGATAGCAAGCCGTTGACAAGATGTTGAATGGAGCTAATGGGTGATG ++ +CCCFFFFFHHHHHJJJIIIIIJEIIHIEGHJJJJJJJIJJJGIIJJJJJJGHDHHFFFFFFEEED@BBBDDDDDDDCDDCDDCDDDAACD@CCDDD9@A:3 +@D7DHSVN1:151:D12V0ACXX:8:1101:10958:2023 1:N:0:CGATGT +GCATAATACAATTGACAGCATCATCACCACTGAACTCCTCAGACCATGCAACAAGGCTAGGCATCATGTCCTGATCAAGCAACCGCCAATTCTTGAGCTTC ++ +CCCFFFFFHHHHHJJJJJIJJJJJJJJJIJJJIIIJJJJJJIIIIJJJJJJJJJIIJJJJJJJJJJJJJJJJJHHHFHHFFFFFDDDDDDDDEDACACDCC +@D7DHSVN1:151:D12V0ACXX:8:1101:10876:2040 1:N:0:CGATGT +CCATCCTCACAAACCACATTATCATTACCTCCATCTGATCCAAACATCGCAATTGGACTACCATCCAACTTCTTAGGCATAATCATCTCAAAACGATTCAA ++ +CC@?DFFFHHHGFGHJIIIJJIJJIIIJJGJJIIJJJIEGFHDHIIIJGIGIJHDGHIJGJIIIIIJJGHHHGGCD@CCFEEEEEECCDDCDDDDDDBDDE +@D7DHSVN1:151:D12V0ACXX:8:1101:10945:2062 1:N:0:CGATGT +CCCGACCCCATGGTTAACTACTTGGAAGAACCCCCACTCTTTGCAGGCCTTAGCAATCTGGTCCATGGTTGACCTGACCATGTTCAGGTTGCTAGAGGACA ++ +CCCFFFFFHHHHHGIJJJJJJJIJJJJJJJJJJJJJJJJJJJJIJJJJJJJJIJIIJIHGHHHHFFFFFFDDEECDDCCDDDDEEECDCDDDDEDDDBAB? +@D7DHSVN1:151:D12V0ACXX:8:1101:10889:2112 1:N:0:CGATGT +CATGCTTCAACGATATCGACGAGACAAACGAATGACCAGGACGAGAACTACCGGAATCAATACCGGCCGCATTTTTCAAGTACCAGGCAACAGAAGGGGGA ++ +@@@DDBDDF?F??FFDFEFGII:?D@FEB?G?;@F>F30;;CAEE4=A93=;=<8@=@@B@;A(3/8;;;@B>@ABA@@@4>@@>>0(2??BBBACDBDDBB +@D7DHSVN1:151:D12V0ACXX:8:1101:10822:2116 1:N:0:CGATGT +ATGATTTTGTCTCAAGCGTACGAACTATCTCACCATTTCTTATGTCCCATAACCTCACTCCGCCGATGTCACTACAAGAACTCAATATAGTTTGATCACTA ++ +CC@FFFFFHHFHHIJJJIFHJJJJJJDHIGIHJJGGHIJIJIJIIIIGGHHIIIJJJIGIJDIIECCCCDDDDDDDEA +@D7DHSVN1:151:D12V0ACXX:8:1101:10879:2146 1:N:0:CGATGT +GGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACTCGAAGAGCCCGGTATTGTTAGATC ++ +CCCFFFFFHHHHHJJJJJJJJJJIJJJIJJJIIJJJJIHIIJGIJGIJJIJJJIJJJJJJIJJGIJJJJHHGHHHFFFFDEDDDDDDDD8@DEDEDDDDDA +@D7DHSVN1:151:D12V0ACXX:8:1101:10759:2146 1:N:0:CGATGT +CTGTTTGGTCCTCCGGGAACTGGAAAAACTCTTCTTGCTAAAGCACTTGCGACTGAAGCTGGAGCGAATTTCATCAACATAACCGGTTCCACGCTGACATC ++ +@CCDFFFDHFHHHGGIJJJJGJJJFIJIIJGHIIIJIJIGJIIHGIJGIIJIHGIIHHHGHEBDFDDDBDDDCDDCCCDDCDDDDDB@@ADDDBD><EHF:;;>@B@################################ +@D7DHSVN1:151:D12V0ACXX:8:1101:10769:2236 1:N:0:CGATAT +CGCAATTCTCACCTCCGTCCTCGTTGCCGGAAACTCTCCGATTCTTCCACTTCCGGCCCCACTCCGATGACTCCCAATGGCTCAAGAGAAAAAGATTTCGT ++ +CCCFFFFFHHHHHJJJJJJJIJJJJIJIJJJJJIJJJJJJJJJJJJJJJJJJJJFHHFDDDDDDDD?BDDDDDDDDDDDDDDDDDD@BDDDDDDDCDDDD? +@D7DHSVN1:151:D12V0ACXX:8:1101:11156:2085 1:N:0:CGATGT +CTTCTGTTTAGGAACTGACGTGGGCCATCGTTGACCCAAAACCCAGACCATGCTTTTATGTAATTCAGTTGCAGATCTTTGGTTGTGAGGTTCAAGATTCC ++ +CCCFFFFFHHHHHJJJIJJJHIJJIJJJJJJIIJJJJJJIJJJJJJJJJJJJJJJJJIJJJJHHHGHHHFFFFFFEEEEEDDDDDDDDDDCDDDEDDDDCE +@D7DHSVN1:151:D12V0ACXX:8:1101:11128:2137 1:N:0:CGATGT +CTGGTGAAGGGTTCGCTTATGTTGGACAACTCGAGTTCTTCATCAGAGAAGCACCTGAGAAGATGAAATCAATGAGCACAGGATTTTTCCTAAGCACATTG ++ +CCCFFFFFHHHHFHGIJJJJIJJJIJIJJJIJIIJIJJIJJJJJIIJJJJJIJJIIJJJJJIHIHHHHHHFFFFFDECEEEBDDDDDDDDDDDDDCDCDCD +@D7DHSVN1:151:D12V0ACXX:8:1101:11032:2199 1:N:0:CGATGT +AGCGGTTTGAATAGTCATATGAAGAGATCCAGTAATCTTAGCCCCTTTGAAAGGTTGAGAGGGTCCGAACTCAGTTCGGCACGCCATTAAACCGGGCATTT ++ +BBCFFDDFHGHGHJJJJJIJIIJJIJJIJJJJGIJJJJJJGFGIJJJJJJJJJJHIJJJIJJIGJJIHHHFFFFFEEDDDDDDDDDDDDDDDDBDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:11106:2222 1:N:0:CGATGT +GCAGAAACACATGATCCCATACCTAGATATAACAACACCCTCTTCATAATGCTTCTTTAACTTGGAGATGTTAATAATTAGCTTTAGATATTATTTTTTTC ++ +BCCFFFFFHHHHHJJJJJJJJJIJIJJJIIIIIJIJJJJJJJIJJIJJJIJIJIJJJJIJJJJIHIIIJJJJJIJEHGHHHHFFFFFFEEEDFEFEEDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:11405:2026 1:N:0:CGATGT +GAAGTTTCCTCGATACTTCATTGCTAGATTCATTAACATGGGTTAAATAGTTCTCAAGAGCAACAAGCAAGCTTTCACAATATTGCTTGATCTCACTCCTG ++ +@@@BDADEHHDHFGIGIIIHIIIIIAH>HGIIIIIIIIIFIICGIGIIEHHHHIIEH@DFBFGEHIIIIIIDHIECEEHHFFFFDDFEEEEEDCCDDDCCC +@D7DHSVN1:151:D12V0ACXX:8:1101:11478:2036 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAACAACAAAGTAGTCCCTATGTAATA ++ +@@@DFDFFHHHHHJJJJIHIJJJJJJJJJHHJHIJIJJJIJGCGHIIJJIHII@GIHHHHHHFDDFD;>@############################### +@D7DHSVN1:151:D12V0ACXX:8:1101:11337:2049 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAATCTCATATAAAGACACACAGT ++ +@CCFFFFFHGHHHJJJJJJJJJJJJJJJJIJIHGJIIIJIGGIGJJGJIIJJJGHDHHHFGFF@BDDDEB############################### +@D7DHSVN1:151:D12V0ACXX:8:1101:11374:2059 1:N:0:CGATGT +GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTACCTCGCATGCCGTCTTCTCCTTGTGAAAAAATCCTTCACTTCATCTTCAAGCAGAAACCTC ++ +@9 +@D7DHSVN1:151:D12V0ACXX:8:1101:11319:2143 1:N:0:CGATGT +CTGCCGCCTCCTTTGGGAGCTTCTTCCCGGCTTTTGGCTTCTTCTCCGCCGGTGCTTTCTCGGCGGCGGCGGCGGCTTTCTCGGCGGGGTTCTTTTTTTCC ++ +CBCFFFFFHHHHHJJJJJJJJJJJJJJJJGIJJJJGIJJJJJJJJIJGIJEF>?CCC<@C>CCDDDDDDC3@B#### +@D7DHSVN1:151:D12V0ACXX:8:1101:11614:2037 1:N:0:CGATGT +ACTTCTGAAGACAAGACTACTACTCCACTAGACACGGCATTTGGCTTATCAAAGAATCCCAGTCCTGTGTGCGACTCCTCATCTTCATCCATGACACCAGA ++ +CCCFFFFFHGHHHIIIJJJJIJJIJJJJJIJGIJIIJJJIJJIJJIJJJJJJJJJJJJGHJIIJJJIIHHHHFFFCDEDDDDDDDEEEEDDDDDDDDDDDA +@D7DHSVN1:151:D12V0ACXX:8:1101:11701:2043 1:N:0:CGATGT +CCGGGCGTCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCTTGCGGATGTTAACGCAA ++ +CCCFFFFFHHHHHJJHIJJJJJJJJIJJJIFIIJJJIGGGJHHGFFFFDDDDDDDDDDDEEDDDDDABDCDCDDDBDDDDDDDDDDDDDDBB@CDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:11509:2065 1:N:0:CGATGT +GCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGGTCATCCCCCCTCCCCCGGGCTCCTTTCCAAAAAAGGCCCCCGCCGCCCCCCCCGTTCCTGGGGACTC ++ +@@@FFFFFH4CDDHIIJJGHHHIIJGGFGEG###################################################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:11628:2075 1:N:0:CGATGT +CGTCACAAATCCTCCAAACAAACACAACCACTTTGAAACTTAACCAACCAACAAACCACGAATCAACTTCACCAACACAATCTCAATTACAACTCTATCAC ++ +CCBFFFFFHHHHHJJJJJJJJJJJJJJJJIJJJJJJJJJJJJJJJJJJJJJJJJJJJIJIHHHFFFFFFEEEEEDDDDDDDDDDDDDEDDDDDDDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:11616:2101 1:N:0:CGATGT +CTCGGGAATATTCCGCCATAGTTAAGGCAGTCAACCCAACTCTCATACGTGCCCCCGGCGGTTCATTCATTTGACCATAGACTAGAGCTACTTTTGATTCT ++ +@<@DD?DDHBD,AFHHGH=FHEFD>B>F):19:<1:@HGGHFGH*9BG;).88=FHE=BCB8=BCD:>4:>>4ACC@3>34:>>>>+::(4@>C####### +@D7DHSVN1:151:D12V0ACXX:8:1101:11743:2106 1:N:0:CGATGT +CCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCAATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGATCGACTAACCCATGTGCA ++ +BCCFFFDFHHHHHJJJJJJJJJJJIJJJJJIJJJJJJJJJJJJJJIJIJHHFDDDDDDDDDDDDBDDCCDDDB9@@A:@ACCCCDDBBBDDCDD@?C@CCD +@D7DHSVN1:151:D12V0ACXX:8:1101:11520:2106 1:N:0:CGATGT +AGGAGAGAGAAACACTTTCGATTAATTAAAAATCAAATCAATTAATTAAAACCAGAACTCAAATCCCATTCTTTTTAATTTAATTTAATTTAATTAAATGT ++ +@@@FFFDDFBFHDGHGEGIIBHEHIIIHIIIIGHHIIIIIIIIGIIIIIIGGGHBGHIIIIIGEGHEGGHGGEEFEH@>CFD@CCE>AEDDEDCDCCC>;; +@D7DHSVN1:151:D12V0ACXX:8:1101:11603:2193 1:N:0:CGATGT +TCTTAGCTTTAACCTTCAAATGCTTTTCCAATATACTCACAAGTGACGGCACCGTTACAGGTTGCGTATTACCCAAGTTATATATCCTATACGGTGCGGGC ++ +B@CFFFFFHHHGHJJJJJJJIJIIJIJJJJJJJJJJJJJJJIIHIJHEAGIIIJIDGIIIJDGIHFEEFFFFEECCAACDEEEDEEDDDDDDDBABD7@95 +@D7DHSVN1:151:D12V0ACXX:8:1101:11509:2212 1:N:0:CGATGT +GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAATACTATGCTACAATGTTTGCCGGCAGAGAC ++ +@C@FFDFDDDHFGIGIFHGEGGHHJJJGHCFHGIHIFHBD?FFHGGGGIGII@AEHGEEHEEE>BCBD?B############################### +@D7DHSVN1:151:D12V0ACXX:8:1101:11942:2140 1:N:0:CGATGT +CTCAAATCAACACCATGATTAGGAGAACGCGTTCAGACCGATTTGAATGATAAGATTTTCATGGTTACAACCGAATCAGGGTTATTAAAATGGCCATAACA ++ +?@CDFFDBFDHFHIIIEIHGDHED@FFDHFGEDFEDGHEEHHEHHIGGIIGIHF?AEHBDEF>@7;CAAAA=88=55:>><(+8:CDCCDD>@?ACACDCC +@D7DHSVN1:151:D12V0ACXX:8:1101:11958:2165 1:N:0:CGATGT +CCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGC ++ +CCCFFFFFHHHHHJJJJJJJJJJJIJJJJJJJJJJIJIJIJJIJJJJJIJIJJIJHFFCBCEEEDDDEDFDEEDDCDDDDDDDDDEEEEEEDDDDDBDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:11924:2172 1:N:0:CGATGT +TTGGCAATAGCTTTGAGTGACTCAAAGAAGTAGGTAGATTCCCGAATGATTGCATACCCATTGGGACGTAGGATTCGATCCATTTCCAACAGAACATACTT ++ +CCCFFFFFHHHHHJIIJGHJJJJJJJIJIJEHIIEGHJIJJJJGGIIJJJIDIIGIJJJIGIIEIEHJEEHHHFFFFFFEDEEEEEDECCDDDDDDDDDC; +@D7DHSVN1:151:D12V0ACXX:8:1101:11836:2197 1:N:0:CGATGT +GTGTTGTTTGGGTGGGATGGGGAAAAAAAATGATGGGTGAATTTTTTTTTAGGGAAGATATGGAGACGAGGAAAACAAGGGCGGCGATGGAACCGGGGAGG ++ +@@@DFFDDFHHHDHGGEEEHGEHIIJIJJIBHGJJIG=AEHIHHHHFDDD?CDDDBDD@?9??BBBD?>CCBBDDD?BB9>9@BBCCC@@B##### +@D7DHSVN1:151:D12V0ACXX:8:1101:11909:2198 1:N:0:CGATGT +GGGCACTTCATCTTTTGCTCTAAACATCAAACCAACCCAACACCTTCACCTTCCTCCACCTATTTTTTATTTTTCCATTAAAATCCCAGTTTTTTCATCTG ++ +CCCFFFFFHHHHHJJJJJJJJIJJJJJJJJJJJJJJJJIJJJJJJJJJJJJJJJJJJJJJJJJJJJJHFFFFFFEEEFEEEECEDDDDDDDEDDDDDEEDD +@D7DHSVN1:151:D12V0ACXX:8:1101:11913:2230 1:N:0:CGATGT +CGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGTTAGC ++ +BCCFFFFDHHHHHIJJJJJIJGIJJJJIIIJJGIJJJGIJJJGIGGEIIIIJJJHHHHEFFEDCEECEEEDDDDDBD@BDDBDD>A?@BACBDDDA@CCD@ +@D7DHSVN1:151:D12V0ACXX:8:1101:11830:2231 1:N:0:CGATGT +CCAAGAAGTCACACATGCTCCAAACAGATATATCTCAGCTTCACTACCATGAGGCGAAGTGAGGACAACCTTAGGAAGATCTCCAAGTCCTTCAGTCAACT ++ +CCCFFFFFHHHHHJJJJJJJJJJIJJJIIJIJJJJJJJJJJJJJJJJJJJIJIJJJJIJGHHHHHHFFFFEEEEEECDDDDEDDDDDDDDDDDDDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:11967:2238 1:N:0:CGATGT +CTCCGTACCAGTTCTGAGTCGACTGTTCGACGCCCGGGGAAGGCCCCAAAAGGAGCCGTTCCCAGTCCGTCCCCCGGCCGGCACGCAGCAACCCGCCCTCC ++ +<@@DDDDDHH?C1==(='83@8805<<55>@5<<-5>B############### +@D7DHSVN1:151:D12V0ACXX:8:1101:12221:2045 1:N:0:CGATGT +GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCCTATGCCGTCTTCTGCTTGGAAAAAATATTAAACTAGTCAAATAGGACTCTCCCCAA ++ +;?;DA6=DAB+CA?B:?CCD@B;@BBD:@5<9@@>C:?CDDGIIIJJJJEG>FFHHIIIIDGEHGGIGGI7CCHHHHFECDDE@EEEDEB59=?=?5@>:+.777?B##################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:12350:2078 1:N:0:CGATGT +TGGGGGGGTGAGTAACGCGAACAATGGACGGAAGTTGACGGTACTCCCAGCATCGTACACGTTGAATGAACCTCATGACGTCAGATTGCTTCTTCCTCCAT ++ +@@CDFDDDBBDD8@CCDDBBDDDDCDDCCDDDDDCDDDDDD6ABDDDDDDDCDDD??B?>CDACCDCCC:AACCDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:12288:2099 1:N:0:CGATGT +CTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAACTAAGGCCAGGAGCGTATCGCCGGCAGAAGGAGCAAGACGACCGGT ++ +@@@FFDDDAFDHHIJJJJJGIGGHII@B5>8?CBDD8AC########## +@D7DHSVN1:151:D12V0ACXX:8:1101:12320:2102 1:N:0:CGATGT +CCACGAGATAGTTCGAGTATCATATCCACAAATCCTCCACCACCTGCTTCTCTAAAAATCAATTACTTCAACTCACAGAAAAGAAATTAAGGAATCCAAGA ++ +CCCFFFFFHHHHHJJJJGHIJIJJJJJJIJIJJIJJJJJJJJJJIJJJEIIJJIJGJJJJJHIIIJIGIJFHHHHEFFFFFEEDEECDDCDDDDDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:12496:2126 1:N:0:CGATGT +CTCGATTATCTCAAAATCAGACCTGTAGAACGTTCTCAGGTTCCCCCCCGCGAGTAACACCGTCAGGTATGCCTCGAATGCCGCTTTCATCGCTTCTTTGA ++ +CCCFFFFFHFHHHJJJJIJJJJJJJHIFHIIJGIHJJJIJIHIJJJJJJGGFAD?BCDDDDDDDDDD4@CDDDDDDDCDCCD>B@B?DDEEADDBDDDD@3 +@D7DHSVN1:151:D12V0ACXX:8:1101:12319:2130 1:N:0:CGATGT +CGATCAAATTTCACAGCTATCCCTCGCATCACAACATGCTTCACCCTCCGTAGTGTTTAACAATTAAATCACCTGATGAAAATCAAGCACCTGTTTGTTTT ++ +@@@A?DEDHDH4?FBFDHGGGGHIIIIIIIIIIIIGCGDDGHCHFGBGCEF=C-=7=DGHHEGEEH;?))?BBB;6;@CCCC@>A>C(9@CDDDDDDCCDDDDCDCEEEEDECCC +@D7DHSVN1:151:D12V0ACXX:8:1101:12587:2185 1:N:0:CGATGT +AACCAGCCAAATTTGGTGCCAAGTTCTATAGAAGCTTGCTATATGTTCTCTCTAGTTTTTCAAATTATTCAAAACCACCGACACATTCAATGGATGAACCC ++ +CCCFFFFFHHHHHJJJIJJJJJJIIJJIJIIJJIJJJJJJJJIJJJJJJJJJIJJIJIJJJJJIJJGHGGIHJJJIJJHHDFDDDDDCEEEDCDDDDDDD8 +@D7DHSVN1:151:D12V0ACXX:8:1101:12502:2233 1:N:0:CGATGT +TGTGAAACCGGCGCTAAACCATTAGATACTTCTGTAGGGAATGTCTTCATAAATCCGGCTTCTATATCGCAGAAATCTACTTGAGCGATCGATGGAATTTC ++ +CCBFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJIIJJJJJJIIJJJJJJJJJJJJHHFFDEEEEEEDBDDDDDDDDDDDEDDDDDDDDDDDDEDDDDDCC +@D7DHSVN1:151:D12V0ACXX:8:1101:12696:2247 1:N:0:CGATGT +TGACTCTGCTGGTGGATAATCCTCTGCCAAAGGCTTTTTGACAGAAAAGTCTCTACCCTGTCTGTCCTGATTAAGAGGAACATCCCTCATGTCATTGGAAC ++ +CCCFFFFFHHHHHGIJJJJJJJJJIGHJJJJJJFIJJJJIIIJJGIJIHFHGJIJJHJJJJJJJGHIJJGHJIHHEHGFFFFFEEDEEDDDACDFEDDDCC +@D7DHSVN1:151:D12V0ACXX:8:1101:12855:2049 1:N:0:CGATGT +GGGGGCATCTCACCGGCAACCCACGGTGTCGAACCCATCAAGCGACGGCGGCCGGGGGCCACATTACCTGAAGAACCAGCACCACCACCACCAGCGGCGGC ++ +CCCDFFFFHHHHHJJJJJJJJHIJJJHIGJJJJJJJIJJJJIHHHFDDDDDDDDDDDD;B?BDDDDCCDDDDDDCCDDDDDDDDDDDD?8?@BA?9@B@B5 +@D7DHSVN1:151:D12V0ACXX:8:1101:12826:2071 1:N:0:CGATGT +GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAATCCTGTTGAGCAGTTGATCCCAAGATGCCG ++ +@@@DD:DDFFADD@GIAFDGGIIIFHIGE?B??DGFHIDB?DFHIIGG@>GG@8@G@==C>CA###################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:12846:2088 1:N:0:CGATGT +CGTCGCGATAATTGTGCTAGTAGCTTCTCGAAATCATCCTTGTATCATTACATGCGATGGTTCCTGGTATCTCCGCTGTAGAGCCAGTCATAAACAGTGGG ++ +CC@FFFFFHHHFHGHIJJJJHIIJJJICHGIHIIGIJJJJGGHIJGHIJJIJIHJFIIJJGHHHHFHFFFFFFFDDDD@CDEDCBCDCCCEEDDDCDDDDB +@D7DHSVN1:151:D12V0ACXX:8:1101:12947:2106 1:N:0:CGATGT +CGCCTCTCTCTGTTCTGCATTTGAGTAGAAGAAACCTGCATTTATTTCACTTTTCTCATACTCAAGAGACACATTGCAAGTCAATATGTAACAATTTTCTG ++ +@@@DDD?DDBFBBB77@DCAC########################## +@D7DHSVN1:151:D12V0ACXX:8:1101:12805:2220 1:N:0:CGATGT +CATACATTACTTATGCTGAAGAATCTACAATAAAGGGTTGTTGATATAGTAATTATCTATGATAAGAACAAAGGCGCATAACGCGCAATCACAAAACATAA ++ +@@CDFDFFDFFABAFFEEFGEFBHGHGDBFHHHGDAH:?@GGA>CA7=CHDBBCECEDC@CCDEDDDADDDDCDA: +@D7DHSVN1:151:D12V0ACXX:8:1101:13105:2163 1:N:0:CGATGT +GCCGGCTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGATCAGCACTCGGTCC ++ +BC@FFFFFHGHHHJGIIIJGJIIJGGIJJIEHJJGGIJJGIGFHIJIIIIIJGCBFHHIGIIIGHEEFFFEEEACC?BB=?@DD>BBDECCCDBDDDD### +@D7DHSVN1:151:D12V0ACXX:8:1101:13085:2227 1:N:0:CGATGT +CGGCTGGTGTGGACTCTAAGGCTGGGCTTATTCATCGTACCAAGTGTTCTATTGGCTTTACTTATTCGTTTTACAAGTTTACTTCCTCGACCTAAGTTATT ++ +BCCFFFFDHHHHHJJJJJJJJJJJJJIJJGIJGJJIIHIJJIJJGIGIIIIJJIJIJJJIIIIHJJCHEHHHEEFD@@DDCEEECEDC?>@BBCCDEDCD@ +@D7DHSVN1:151:D12V0ACXX:8:1101:13313:2014 1:N:0:CGATGT +GGCGAAGGCACTGACGTCAAGGCCGGGGATGTTGAGCGTCATGAGGATGCTCTTAACACCCGTGATAATGTTGAGTGCATTGCTAGTTAATTCCCTTGAGA ++ +?@@FFFDDHHGHDFGHIIIIEIICGGIIA6B=C>>GGI-;;AH>CE@>CDEEC;@CCECBB?;/<:CACCDECCC:@>ADDC:A(::>>@CDCC@CA3:C? +@D7DHSVN1:151:D12V0ACXX:8:1101:13325:2028 1:N:0:CGATGT +CCCGATTCCCTTTCGATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACC ++ +CCCFFFFFHHHHHJGGIIJGHFEBGHI;FHBDBGGEIJI@EBDD::BCCDDD?9BBCC<:@CCC?;?B@>C:ABBDDCC::::CC:@<9><9A>::9:A30 +@D7DHSVN1:151:D12V0ACXX:8:1101:13304:2034 1:N:0:CGATGT +CAAGTAAGACTCTCCTTTTTACCTACAACCTCGAAGAGGGTATCCTCCACGGTATAGTGGAAATTGGGTACATCCAAACGGGGCAGATCCTCTGTAAAGGG ++ +@<@DBDEF?FFBFGIIIIIGGDHIECEGGCGGA@FIFHGI:BBDFGHGE)7;FGIIE4)8@CE@DD>EE>BDAEFDCCCCBBBB=@?CCCCCC@4>>::@? +@D7DHSVN1:151:D12V0ACXX:8:1101:13467:2042 1:N:0:CGATGT +CCCAGCTTTTGGCAAATTTTGAAGCTCAAGTCTCTGTCAACCATCTTACTGCTCCTCGGACCGCCACTGTTCGAAGTTATAGCTGGACCATCTAACAAAAA ++ +CCCFFFFFHHHHHJJJJJJJJIJJJIJJJJJJJJJJIIJJJJJJJJJJJJJJJJIIIJJJJJIHHFFFFEEEDDD?BDEEEDDDDDBDDBDDDDDDDDDB@ +@D7DHSVN1:151:D12V0ACXX:8:1101:13267:2114 1:N:0:CGATGT +TGATGGTCTTTCCAGTTAGAGTCTTAACGAAGATTTGCATTCCTCCCCTAAGACGGAGCACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCAGCT ++ +CC@FFFFFHHHHH@HIIIIJJFIIJJJIIIJJJDIJGIGIJIJJIJJIIGGHJIJIGHIJFIJIGEHEEHHFFFFDCEEEEEEDCCCCCCCCDDCCDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:13385:2137 1:N:0:CGATGT +GTTAGTGTCATCTTTACCCATGAGCTTTTGATACCCAAGAGCTGAGGAATTATACAGAGGCATGCTTCGCATTGTACCATCCAAAACTGTGACACCAATAT ++ +BCCFFFFFHHHHHJJJJJJJJJJJIJJJJIIJIIJJJJJJJJJJJJJJIJJJJJJIIJJIJJIJIJJIFGHHHABDFFFFFECEEDDDDCCDD@CBAD:>A +@D7DHSVN1:151:D12V0ACXX:8:1101:13260:2140 1:N:0:CGATGT +CTCATCTTGAATAGCTAGTAATCAGAGAAATGAAAGTGAGAGAGAAACCGAACCAGGGAAGTGGGAGAGGAATAGAACCTCATCTTGAATAGCTAGTAATC ++ +@7@DDBB?A>,==AA:@AAB>:AA######### +@D7DHSVN1:151:D12V0ACXX:8:1101:13418:2147 1:N:0:CGATGT +CTTGTCAATGCTGGTTGCCAGCTCTTTCTTCGCCTTCTCCAGCCCAGCCCTCTCAAATTCATTTAACGGGCCAAGCGGGAAAATCTCTTCAGCTCCACTAC ++ +CCCFFFFFHHHHHJHIJJJJJJJIJJJJJJIJJJJJJIIGDGIJJGHIJJJJIIFGIGIJJJIJJJIHEHFDDDDBD@D@BDCCCDDCCDDCDDDDDDAAC +@D7DHSVN1:151:D12V0ACXX:8:1101:13457:2228 1:N:0:CGATGT +ACCAAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACCATTGTGACACTGTCATCAGTAGGGTAAAACTAACCTGTCTC ++ +@CCFFFFFHHFFHIJJJJJJICFGGIIBGIIJJJGGDGHIJJJGIJJJJJEHFFHFFFFFFFCEECEEEDDDDDDCCDCDDDDD>?CDCDCDDCDABACCC +@D7DHSVN1:151:D12V0ACXX:8:1101:13437:2233 1:N:0:CGATGT +GCCCAGGGTGGGGAAGAAATTCCAGATACAGTTCCCTTGGAAGATGACGAGTCCTTAGGGGGACTTCCAGGAGTATTGCCTGTGGGGCGAGGCATGTCAAC ++ +BCCFFFFFAFHFHIJJJJJJJJJJJJIIJJJIIJJJJIGIHIIHGIJJJIJCAGGIHJJHFEDDDDDDDDDAB<@######### +@D7DHSVN1:151:D12V0ACXX:8:1101:13285:2243 1:N:0:CGATGT +ATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCGAATGGGGGCCGGCGATGGGCCTCGGTCGGATGCGGAACGGCCT ++ +?@@DDDFDHBHFHIIEGHBGFFGIHIHF?@?G1?FIGEGIIGHIIJJII3;@&8ABDBDB29BB>8<<@B-5<@ +@D7DHSVN1:151:D12V0ACXX:8:1101:13331:2247 1:N:0:CGATGT +CGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCAAGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTT ++ +BBCFF@DDHHHHHHHIHIIJJJJJJIJJGGIJJJJJJIJFHHIJIIIIHHEIE@GIJIHIIIGHIHEEHDFFFFFFEECCEEDDDDDDDDDDDFEDBD5@D +@D7DHSVN1:151:D12V0ACXX:8:1101:13728:2069 1:N:0:CGATGT +CTCCGGGTTATTCTTATACCCATTTGTCACATTCGGGCCACGAATACAAACCTCCCCTTTCAACCCAGGCCCAAGAACAGTCCCATTCTCATCAAAGATGG ++ +CCCFFFFFHHHHHJJIJJJJJJJJJIIIIJIJJJJJJJJIJIHIJJJJJJJJJJJJIGHHGHFEFFDABD=@BDDBCCDDDDDDCCCDDDD@CACC>CCC> +@D7DHSVN1:151:D12V0ACXX:8:1101:13531:2075 1:N:0:CGATGT +CGGTAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGTTAGC ++ +B@CDDDDDFHHHHGIJJJJJJJIJGIIIH@GGGHHIJIHJIIEHJIIJIGIIJEHGIGHHHFFFFFFFEECBB?B?@DDDD?CCCDDDDBCDDCCDCCAAC +@D7DHSVN1:151:D12V0ACXX:8:1101:13581:2091 1:N:0:CGATGT +CCGGTTCGCTCGCCGTTACTAGGGGAATCCTTGTAAGTTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTG ++ +CCCFFFFFHHHHHIIDEIIJJJJJJGIJIIIIJGIJIIJJIIJJJIHGGIIIHGIHHHFDC?BDDEDCDDDDDDDCBDDDDDDDBDDDB9>8ADA@CCCD< +@D7DHSVN1:151:D12V0ACXX:8:1101:13556:2115 1:N:0:CGATGT +GCGGATTCTATAGCGTAGAAGATTCTAGAAGCTAAATCAGAAGATCTCTGCCATGCAGCGAGTCGCGGTAGGAGGCTGGATTCGCTACTATGGCTGACCAC ++ +@CCFFFFEHHGHHIIEGGIIF@HGCECHGIIIIIIIICDFHGGIHIIIIIIIIIIIIIIEHI@DHHFC8>BBCDDB@BD?CDCDDBDDD@(>AB???AC:< +@D7DHSVN1:151:D12V0ACXX:8:1101:13578:2117 1:N:0:CGATGT +TCCCCTCGGCAAGGTGCCCCAGCTTTGATGAGACCAGTAGCAAGACCCACCGAGAAATCCGCAATGAAAGTGTCCTCAGTTTCACCACTCCGATGTGATAT ++ +@CC?DFDDFFFDFFAEFHIJGIIGIJG>DGIJDHHIGDGHIGGFGEHICHIIJICDD>CCDACD@CCCDDDC??9<98::>B# +@D7DHSVN1:151:D12V0ACXX:8:1101:13622:2141 1:N:0:CGATGT +ACCGAAGCGACAAAGGGCTGAATCTCAGTGGATCGTGGCAGCAAGGCCACTCTGCCACTTACAATACCCCGTCGCATATTTAAGTCGTCTGCAAAGGATTC ++ +CCCFFFFFHHHHGJJJJIJJJIJJIJJHIIJIJJJGHIGIJIJJFHDHEGDEHCEEFFDFFFCC3@CEDDDBD?@:?BCDEDEDDDBBBDBCCDDDC?>C: +@D7DHSVN1:151:D12V0ACXX:8:1101:13685:2151 1:N:0:CGATGT +AGCTTGTGGTAGATGTTTCTAGGCCTAGGACGCTCCCTTCAGGGCAGTGGGCTCCTCTCTGACCTAAGGCAGGAACAGAAATGCCATCGAAGAGCAACTAC ++ +@@@FDAFFHCFHHBHGGGFHCHEGHGGHJIGIBFHDHGIGHGIIGIGGHIIDGGHIGIIGEEHDFEEFCDBB?;?AACCC@3:CCDDDDCCDBBA>A?CD@ +@D7DHSVN1:151:D12V0ACXX:8:1101:13542:2163 1:N:0:CGATGT +GCCAATCTTCCATTTTTTATCTCCTTCACTTTGAGCTCAGCAAAGGCTTCTGGGTCGTCGGCTAGGCCCAATGGGTCGAAGCTACCACCCGGGTAAAGCGG ++ +@CCDDFFFHHHHHJJJJJJJBHIJJIIGIJJJIIIIJIJJJJJJIJJJJJIJGIBGHHIJAHEDFFEEDDDCDDDCCBB@?FHGGGHGIIGIHHHEEEEECEEECDCECCCCDECB8::>CC??CCCDDCCCCCCA44>ADCB8 +@D7DHSVN1:151:D12V0ACXX:8:1101:13644:2172 1:N:0:CGATGT +CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGATCTAAAGGATCGTTAGGCCACGCTTTCACGGTTCGTATTCGT ++ +CCCFFFFFHHHHHJJJJJJHIJHJIJJJJJJJIIJJJJJJJJJIIJJJIJJJJJJJJJJJJJJIGIJJJJIHHHHFFFFDDDDDDDDDDDDDDB?CCDCCA +@D7DHSVN1:151:D12V0ACXX:8:1101:13532:2197 1:N:0:CGATGT +CTGTAACATAGACCCATCTTTAGTGAATCGGACTCTCTCAACTTTACCCTTCTTAACAGCGCTCAAAAACTCACTATATCTCCATTGGGAACCTTCTGGAA ++ +CCCFFFFFHHHHHJJJJJJJJIJHIJIJJJJJIJJJJJJGIJJJJIJJIJJJJIIJJJJJJJJJJJFHHHFFFFFFEEECEEECCEDDBBDDDDDDDDDCD +@D7DHSVN1:151:D12V0ACXX:8:1101:13503:2199 1:N:0:CGATGT +CCTTGACAAGCAGCAACATGTAACGGCGTTCGAGAATCGACATCGACGAAATTCACATTCGCTCCTAAATCAACCAGCTCTTTAATCCCTTCCAAATCGCC ++ +CCCFFFFFHHGHHJJJJJJJHJJJJJIJJJJJJJJJJJJJJJJJJJJHFFFDEEEEEDDDEDDDDDDDDDDDDDDBDDDDDDDDDCDDDDDDDDCCDCDDB +@D7DHSVN1:151:D12V0ACXX:8:1101:13579:2207 1:N:0:CGATGT +AGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGTTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAAT ++ +CCCFFFFFHHHHGJJGHFGHJJJJJJJHHHFFDDDDDDBBDEDDB/:@BBCDDDD@5C@CC@?DDDDCDD?C9 +@D7DHSVN1:151:D12V0ACXX:8:1101:13675:2228 1:N:0:CGATGT +CCTTGGTTTAATGTCCGCGCACCTTTGAGCAGTCCAAGGAAGGGACGAGATCGATGCCTAAGTCGACACCACACTTGCTGGCGAGGGGACCGGCGTAGGCA ++ +@??DDAAACHHBFHGDDHIIGECFHGG@F@FHFFGIIII9BDHGBHHAHHEA?;;@BCC>@AA@@@B:;?@BBBCC@CAAC?B9><<305<>@B<509?CA +@D7DHSVN1:151:D12V0ACXX:8:1101:13614:2248 1:N:0:CGATGT +TGTACTTCCTCGGATAGCAGATAGTGCAAAGAATGACAAAAGTGCGGTGTTGCGTGCTAGATGCTGTGAATATGCACACTTAATTTTGGAGCAGTGGCCTG ++ +BC@FFFFFHHHHHJJJJJIJIJJJGHIGIIIJJJJGJJJJJJHHIIJDFGIJIHFHJIHHHHHGFFFFFFEDEEDEEDDDDDCDDEDDDDCCDDCDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:13871:2050 1:N:0:CGATGT +GCCGTCGCAGCATCAACCCCCCACCGGGATCCCGCTCCGTGCCATCCCCTTCAACGTGGTGGATCACGGGAACGGGAAGCCGGATGTCGGTGATAGGAGTA ++ +CCCFFFFFHHHHHJJJJJJJJJIJJJIJJJJJJJIHHFECDDDCDDDDDDDDDDDDDDD?@BACDDDDDD@BDDDD@BDDDDC>BD@CDD-CCC:C39 +@D7DHSVN1:151:D12V0ACXX:8:1101:13996:2163 1:N:0:CGATGT +GTGGTATTTCACTTGCGCCGAAGCTCCCACTTATGCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCG ++ +CBCFDEFFHHHHHJJJJJJJJJIJJJJJIIIJIJJIJJJIJIJJJJJIJGIJIJJJIJJIJGFHHFFDDEEEDDCCDCDCDDDDDB??AACDDDDDCDDD3 +@D7DHSVN1:151:D12V0ACXX:8:1101:13949:2201 1:N:0:CGACGT +CCCAAGTGAAGTCTCTGATTGATTGCTCTACATGTCAGAGGCACACAAAGTTGAAGACATTAAATTAAAATACAGAGATAAGGATTTCTCCTCTTTCCTTT ++ +CCCFFFEFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJIJIJJJJJIJJJJJIJIJJJEIIIIIIIHHHHEHFFFFFFCEEEEEDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:13903:2210 1:N:0:CGATGT +GTTGAAGGCCCTGTGGTGAAATTAGGCTCGAAATGTTTTTCTCGGTCTACCCATAAGGGTGCCATTATGAAGCACCAAAGGTTCTCAGGAGCAGGAGAGGG ++ +BBCFFFFFGHHHHGHIEHHIIJJIJJIJIIJJJIIDHIJJDGGIJGGIJJJJJJJJJJJCCHHHHFFFFFFFEEECCBDCD@CCDDEDDCDDDDD@DDDDB +@D7DHSVN1:151:D12V0ACXX:8:1101:14157:2018 1:N:0:CGATGT +TCCTAACCAAACTCAACGCCACATTTTTCATAGCCATCAATGCAATTTCTTTCCCCAAACACGCCCTTATACCGGCTTGGAAAACCGGATATCTATACCAA ++ +@@@FFFFFHHHHHJJJJBHIJJJJIJJJHGGGGHJJJIEIIJJJEHCHGHIJJIJJIJDHGGIIHHDFFFFEECA>BD28(:AD>?09&55@CC>>BCA## +@D7DHSVN1:151:D12V0ACXX:8:1101:14079:2034 1:N:0:CGATGT +CGCCACCACCAGTACCTATTTTTAAGAAACCTTGCCCTCCAATTATCAAGAAACCACCAATCCCAGTTTACGAACCAAAGCCTCTCCCTCCTTTGCCAAAG ++ +CCCFFFFFHHHHHIJJJIIJJJJIJJJJJJJJJIJJJJJJJJJJIJJJIJJJHHEGIJJJJJJJJIIJHHHHHFFDEDDCCDDDDDDDDDDDDDDDDD>CA +@D7DHSVN1:151:D12V0ACXX:8:1101:14220:2084 1:N:0:CGATGT +TCGCCATACATCAATAACATTATCAAATCCCCATAAATTTGAACACCACTTGAGCTGCGGGCTGCACACTTTCCTGCAGTCAGATCGGAAGAGCACACGTC ++ +CCCFFFFFHHHHHJJIJJJJJJJHJIJIJJJIIJJJJJJJJJJIGIHJJJJJJJJJJJJJJHFFFFEEEEEEDDDDDDDDDDDDCDDDDDDDDDDDDDBDB +@D7DHSVN1:151:D12V0ACXX:8:1101:14161:2103 1:N:0:CGATGT +AGGTTCCAAAAACATCTGACTCAACAAATCCGACGGCTCAGATGCAATCACAGATCTATTAGCTTGAGCCTCTAAACTCCCAACCATGATGATCAACAACT ++ +CCCDDFFFHHHHHIJJJJJJJJJJIJJJJJJJJJJJIJJIIIJJJJIIIIJJJJJHGHHHHHFEFFFEEEEEDDDDDDDDDDDDDDDDDCDDDC>CDDBDD +@D7DHSVN1:151:D12V0ACXX:8:1101:14225:2170 1:N:0:CGATGT +GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAACAACACACACTTCGACAACCGCCACCCCTGA ++ +@CCFFDDDHFHFHEIGIEHIJJGGIJJIIGIIIIIGFHDFDG?B;(A######################################## +@D7DHSVN1:151:D12V0ACXX:8:1101:14165:2207 1:N:0:CGATGT +ATAAATTCCCAAACAAATTTGATGGATTTTATATCAAAGTTGCTTTTGTTGGCTATATGCATAGGTACCCGATATGGCTGCTTCAGTTCCAATAATTTGAG ++ +CCCFFFFFHHHHHJJJJJJJIHIJJGIJJJGHGIJJJJJIGJJJJJJJIIJIJJIJJJIIIJGGIBGHGIIGJGHHGFFFA3@>6;@;;A3;@>C;CD358 +@D7DHSVN1:151:D12V0ACXX:8:1101:14187:2212 1:N:0:CGATGT +CGCTTTGCCAACAAGCTCTTGCCACTTGCAACAGCAGTGGGATTAGAAAATGAATCTGCATCACTATGTAGTCTAACACCACAGGATGCTGAAGCTCTCAA ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJIJJIIJJJIJHJJJGJJIJIJJJJIJJJJIJJJJJJIJJJJJJJJJIJEHHHHFFFFDEEEDDDDDCDDDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:14143:2222 1:N:0:CGATGT +GCCACATTATTTTTTGGAAAGTTCTTCTCTGACCATTAAAGTAGTATGCATTTCACAAAAATAAATTTGGAAAGAGGAAAAAAAAAAAAAAAAAAAACACT ++ +CCCFFFFFHHHHHJJJIIJJJJIIIJHIGIHGIJJJIIGIIBHGHEIGEGIIIJJJIIIIIIGGGGIIIJEGEEF?EEDFFFDDDDDDDD<@D@>@##### +@D7DHSVN1:151:D12V0ACXX:8:1101:14058:2230 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAACGGAGAGCAAGTTGGCGAGGTGATTCC ++ +?@88??DFCHICHGHGHEDHCHE<.7;(;?CC################################ +@D7DHSVN1:151:D12V0ACXX:8:1101:14220:2244 1:N:0:CGATGT +AAGCATACACATAGAGCATGCAAGGGCCGGTCAAGCCGGTTTTAGATAACTTTTCTATATAACAGGGAGAAGCACCACAGTAAGGCTAGCATTATCACCAT ++ +@CCFFFFFHHHDDFIIJJGGJIGIIGIIIGGIGIJGIJJBHIGGIJJIGGHIIGHHFHHHHFFEFFCCD@DDDCCADDDDACDCCCDDBACEDDEDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:14287:2012 1:N:0:CGATGT +AATAGATGCATAATTTCAAAGCTGATATACCCTGAAAATAACTGGTTTCAATTTGCTAATCAGAACATACAATAAGTTCTACTGTTGATTAACATCTCTAA ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJIJJJJJIJIIIIJJJJJIJJJJJJJJJJJJJJIIJJJJJIJIJIJIJJJJJFIJIHHHHGGHFFFFFFCEEEE +@D7DHSVN1:151:D12V0ACXX:8:1101:14488:2032 1:N:0:CGATGT +AGATCATCATAATTCAACATATTTACTAAATGCTCATAACTTAGTAAACATTTTGACAAACACACAATGACTTGTTCAAGTATGGAAGACAGCCATTTGAG ++ +CC@FFFFFHFGHHJHIIJJCHIIJIIGJJJIGGIJJIJJJJIJH?DGHIJIIGIIJJJCHJIJIJGCGHGGIJGDHGHEGH)=AAEHFFFFDCCEDDEEDB +@D7DHSVN1:151:D12V0ACXX:8:1101:14324:2044 1:N:0:CGATGT +CTCGGATTCTACTTCCTCTCTAGGACAACTAAGATCCACATCTGACGGACCAGCCATAGCCGTACTAGACGACCTAAGATCAAGCTTCAAAGCCTCTGCAT ++ +@CCFFDFDHHGHHIJJGIJJEGGGCGIIIIFGGGHJIGIGGIJIGGIIIIGGGIJIGGHIGIEEHF:?BDDCDDDCCDDACCCCCDDDDDDA?ADDCCCAC +@D7DHSVN1:151:D12V0ACXX:8:1101:14294:2151 1:N:0:CGATGT +CGGTGGTCGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGTAAAAAAAAGAACCATTGACGCTTTGAG ++ +?@@BBD@DFDDFFIGGIIICGGEGIJIBDFHIJJIIHIDFGHHIGIII.@H>===;AE;>D>>8>;;AC:;@############################# +@D7DHSVN1:151:D12V0ACXX:8:1101:14379:2159 1:N:0:CGATGT +GGCAGAAATTTGAATGATGCGTCGCCAGCGCAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACAGGCAAAGCCCGCATCGACCTTTTA ++ +BB?DDDDFHGFHBHIJIJJIJIIJJJ=FCGIJJIIIEEIBHGGA?EDFDDD?>@@CDDEDDDCA:>@A>>5@CDDD@9@<>@BCCDDDDDDCDDECDDDC? +@D7DHSVN1:151:D12V0ACXX:8:1101:14342:2223 1:N:0:CGATGT +CACCGATGCCTTTAGCTTTTCCTCCAAAGCCTTGGCAGCCGTTACATCTGAAAAGCCCACAAAGTTATCCTCCTCCCCAAAATGAGCTTGAACAGGAGCTT ++ +@@@BDDDABBFHHGGIBHGIIG?H?FDHEBGHBD<@FBDD@87DFECGID>GHDFFFE25?;=;7.;@C>>?>CAC?@C1=A@>:@:>C:?@:@98808A@ +@D7DHSVN1:151:D12V0ACXX:8:1101:14717:2007 1:N:0:CGATGT +CATGGCAAAACCGCGACATTGCTGGAATCACAGCCTGTCATGACTGACTGCATTGCGGATGTGTCCACAGGAGCATAGACAACCATGGACTCGTAGTAGTT ++ +CCCFFFFFHHHHHIJJJJJJIJJJJJJJJJIJJJJJIJJJJIIJJJJJJJIIJJJHHHFDDDECDDCCDDD?BDDCDDDDDDDDDDDCCDDDDBDDBDEED +@D7DHSVN1:151:D12V0ACXX:8:1101:14517:2074 1:N:0:CGATGT +CCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGCTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCA ++ +@@@FFDDFHHHGHJGGGIGIIIGEIJJJJJJGJGGHGDBGBFGGGHG@>FHGCEGGF>BDDDA=@DBD?BBDBCDD@B9BB>BC +@D7DHSVN1:151:D12V0ACXX:8:1101:14947:2188 1:N:0:CGATGT +TTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACTACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTT ++ +?@;DDDDBBFFDFFFGFFB:AAF8A?FE;D;DA?BDBGFCFDBF@FFE/AEADEFF)=C;;;;>=>@@A>;>@;>;9<:A@3,5>@BB>@@>4>A:BBBAB +@D7DHSVN1:151:D12V0ACXX:8:1101:14924:2194 1:N:0:CGATGT +GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAACACCTACCTATACCAGAACATCGATATCCTC ++ +@@@FFDFFHHHHHIJJEFHGECFGHIJIGHHIIIGD@FDEEGGEHBFAFGGB;A@AD>;>?E####################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:14879:2224 1:N:0:CGATGT +AGGGACGTAGTCAACGCGAGCTAATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA ++ +BCCFFFFFGHHHHJJJIJJJJJJJJIJJJJIIJJGIIJJIJHHHHHFFFFFDDDDEDDDDDDDDDDDDCDDDDDDDEDEDDDDDCCCDDDBDDDDCDCCDD +@D7DHSVN1:151:D12V0ACXX:8:1101:15004:2005 1:N:0:CGATGT +NTCGAGCAGTCCACCGACAGCCGACGGGTTCGGGAATGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAAGTTACGGATCCATTTTGCCGA ++ +#1=DDDDDFFHHGJIJIIGIJIIIGIIJGGGGGIGHHHGGDDFDDDB??@ACD7<@CDCD@@:A@@< +@D7DHSVN1:151:D12V0ACXX:8:1101:15080:2021 1:N:0:CGATGT +GGATAAACTCCTCATCTTGAGGGCGTTCAAACACCACGGTGCTACTTAGCTCATTAAGCATGGCGCTAATCCCATTCTCCCTGAGCCGGTCTTTAAGGTAA ++ +CCCFFFFDHFHHHFFHJJICH@DHGDHCHGIGIJJJGIGHHHHEHDDGIGIIGGIGIGFIJFGHFFFAAACCAACCBCCDDA>??CCBDC@@CA>A1;?B<@@A@@@::??D??F@GDG8DF;@@B>@;A@BBBB### +@D7DHSVN1:151:D12V0ACXX:8:1101:15494:2018 1:N:0:CGATGT +GCAGGATTGGGGTCGAGCATGCGAGTGACAAGAGAGCACGCTTCAGGGGAGAACCAAGCGGGGCAGCTGAAATCACCCTTATAGATACGACGATACATTCG ++ +@@@FD=DDHHHHFHGAGIBHGEH?@6BACC>A>?AACC@@:ACCCA +@D7DHSVN1:151:D12V0ACXX:8:1101:15308:2054 1:N:0:CGATGT +CGACCTGTTATTGCCTCAAACTTCCGTGGCCTAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGA ++ +@CCFFFFFHGHHHJJIJJJIIIJJCGHIIGJJIGGJJIJJJIJEFHIEGHIFGIIJEHIGGIEHHIIGFD?B@ACECEEDBDBDDDCDDCDECDDCABAA< +@D7DHSVN1:151:D12V0ACXX:8:1101:15437:2087 1:N:0:CGATGT +CCTGTTATTGCCTCAAACTTCCGTGGCCTAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGAGTCCGCATAGCTAGTTAGCAGGCTGAGGT ++ +CCCFFFFFHHHHHJJJJJJJJJJHIIIJJJJJJJJJJJJJIHIJJJJJIJJJJJJJJJJIJJJJJIHAHCEEFDFCDDDDDDDDEDDDEDDDDDDDDDDDA +@D7DHSVN1:151:D12V0ACXX:8:1101:15353:2100 1:N:0:CGATGT +GCCCACTTCTTGAGCATAAACCAAACAAATAAATTAAAAAATCCAGAAAAACTTTCATTCACTCGAGATAGGATTTTCATTCGGAAATCACTTTTAATTAA ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJJJJJIJIJJJJJJJJJJJJJJJJJJJJJJHHHHHFFFFFFEDEEEEEDDDDDDDDDDDDDDEED +@D7DHSVN1:151:D12V0ACXX:8:1101:15259:2220 1:N:0:CGATGT +CTCAGAAAGAAAACTTCAAAGACTGTTTTAATTTCAGGACTCAAAACTAAAGATTCAGATTATCCTGCCCTGTCATCCATCTTATCATGTTCGATCATCAC ++ +@@@BDDDFHGHHHJJJJJIIIGGGGHGIIGIGIJIIJIGICGGHIIHIIIJGICGIHGIGGHIIGGIGICHEGGHGHGEFEH@DDE@;@EAECD>;;CCAC +@D7DHSVN1:151:D12V0ACXX:8:1101:15732:2003 1:N:0:CGATGT +NATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAATGAGGAATTCACCTGCGCCGCAGGA ++ +#1=DDDFFHGHHHJJJJIJJIJJJJJGIJIIJIJGHIIDGEHIHC?CCEGIIAGGD;?:CCH?2;;@BA################################ +@D7DHSVN1:151:D12V0ACXX:8:1101:15541:2026 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAACCAAAAATAGTAACCTGTGGGTAGGGGCAGC ++ +@@@DAB1AFFHDHHFFFFHE?GH@FGIGGDGIIDHGH6??89BDFGIG@FGAA;@@AE=A??;?;@################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:15671:2108 1:N:0:CGATGT +CTTGGGGGACTAATCCCCTACTGCAGGTCGGCAATCGGGCGGCGGGCACACGCGTCACTTCTGGCCCGGATTCTGACTTAGAGGCGTTCAGTCATAATCCG ++ +?@@DDA1@>??0805;>A@>ACCCACCB?>0&23@:ACC:>A### +@D7DHSVN1:151:D12V0ACXX:8:1101:15607:2111 1:N:0:CGATGT +CACAATCACAAGCACCCATACACTCCTCCATTTTTGTAACAAAGCCTTTGACCTGGACAGGAATTTTCCATTCGATCGAGCGCAACTTCTGTGCAAGCTTC ++ +C@CFFFFFHHGFHIHGIJJGIIIIGGHHIFGIJIJG@GGIJJIJIJGIIIGIECH@>FDGHIJJJJIJHHGHHHHHFFDCCDDBDDDDDCD(>CEDCBCD> +@D7DHSVN1:151:D12V0ACXX:8:1101:15572:2115 1:N:0:CGATGT +GTCGGGGAGCTGAAACGTTATGCTATTCATTTTGACAGGACTGGTCAACCAAGTGGATCCGCTGAAGTAGTGTATGTTAAGAGAAGTGATGCATTTGCAGC ++ +CCCFFFFFDHHGHJJJJIJIJJJJJJIJIGIIJGGHIJJIJJJGFHIGJJIHIDHGHEFHHHFFDEE>CC>CA>ACDDCC@CCCCC>CCDCC:>CDDDED3 +@D7DHSVN1:151:D12V0ACXX:8:1101:15647:2138 1:N:0:CGATGT +ATGCATGCAAATTTATCAACTAAATAACAAGTTTGAAATATAATAGATTATATTGTAACAATATTTATGAATTGTCAAATAATTTCATAGGGTTATATGAT ++ +@@@DDEBDDDHHH@HG?FEHHDFHGIIGIGIFHHIGIIHIIIIEDGIGEHIEGCCB@@@GGC@EEEHB@GHF=CBEBDD;? +@D7DHSVN1:151:D12V0ACXX:8:1101:15546:2184 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAACAAAAAAATTGAGTCGCCCACAGCGCACGGGTCAT ++ +@@@DD?@DBFFBDFIII@GFCFCFIIDFC*:CDFEDDDA(898?FEFCF<@=4;A=AE37)7?###################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:15833:2017 1:N:0:CGATGT +AGCAGAGCAGATGTTTCAGCAACAGCCCCCTCAACAACTCTAACCGCAGAATTGTCCAAATATTGTGCTAAATATTTAGCCATCAATGATGATGTAGCAGG ++ +CCCFFFFFHHHHHHIJJJIJJJIJJIJJJJJJJJJJIIJIJJJJJIJJJIJJJJJIIIEHHHHHFHFFFFFFFEEEFDECDDDDDDDCDDDEEDFEEDDDB +@D7DHSVN1:151:D12V0ACXX:8:1101:15784:2055 1:N:0:CGATGT +AGGGCCGAGTGTTCCACCAGTGTGAACCAAACCATTCTTCCAAAACACCCAAATGATGCGACTGTTCATGCTCGTTTCCTGAGAGGACATCCCCTAGTATA ++ +BCCFFFFFHFHHHJJJJJIJIJHIJJJJJJJJJJJJJJJJJJJJJJJJJJJJJIJIJJJHHHFFEEDEEEEEDDDDBDDDCDDDDDDDDDDDDDCDD@CDD +@D7DHSVN1:151:D12V0ACXX:8:1101:15752:2130 1:N:0:CGATGT +CGTCGATATCTTTTTCCTCATCTTCTTCCACAATAATCTGTTCAACCACCTTGGATATTAGGTCTCGATCAACCTTCCCAGATGTTGTCACTTTCAGAACC ++ +CCBFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJIJIIJJJJJJJJJJJJIJHJJJIIJIGIJHHHHHFFFDFEEEEEEEDDDDDDACDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:15887:2145 1:N:0:CGATGT +CGAAATATTAATTATAACACAAAAAAGAAGGTTACATTTGAACAGATGAACTGAGAGAGACTAACACACAACACTCTTTCACTTCTAGAGTTCCTTGGTTT ++ +CCCFFFFFHHHHHJJJJJJJJJJJIJJJJJJGIJJJJJJJJJJJJIJJJJJJJJIIIJJJJJJIJIJHHHHFFFDEEEEEEDDDDDDDDDCDDDDCDD>AA +@D7DHSVN1:151:D12V0ACXX:8:1101:15910:2186 1:N:0:CGATGT +GGATGGTCCTAGTTGTTGGTTAGGTTGAGGTGCAGCAGCTTCGAGCAGGGCTCGGGTCCCACGAGCTGCTGGCCTAGGGGGGATGTGGGTCCCACAAGAGG ++ +@CCDDFFFHHHHFFEHGGIGGHHGGEI>G@DGEGGI@DDFGI<;B@GHGHIIIEGH=ABBC@3=399?CCCD?A3:B-+82(8??<38? +@D7DHSVN1:151:D12V0ACXX:8:1101:15847:2230 1:N:0:CGATGT +TCCACGTCGCTCACCTCAATCTTCTCACATGGTGCTAAGCTGCTACAAGCCAATGTCACTACTTCCACACTGCTCGATGTTCCTCTAACGTTCTTTATTTT ++ +@@CFFFBDHHHHHJGGIJJIIJJIIIGIGIIFCBHHIJEGIIIJJIJIJJJJIJJGHIIIGJIJJJJHHHHGEFFDDEEEDECDDDDDDDDDDDDCDDDEE +@D7DHSVN1:151:D12V0ACXX:8:1101:15932:2230 1:N:0:CGATGT +CCGCAGAGTCAAACAAAAAATAATACCAATTACGTCTCAGGTGTATACGGGGAGTACTAATATGGTTCCAATTATTCCTAGCAAAGCCTAAGATCTTAGAA ++ +CCCFFFFFHHHGHJJJJJJJJJJJJJIIIJJJJJJJJJJJJGHHIJJJJJJIIHAEHHHFFFFFFCEEEEEEDDEEDEDDDDDDDDDDDDDDDDDEDECDC +@D7DHSVN1:151:D12V0ACXX:8:1101:16089:2097 1:N:0:CGATGT +ATTCTACAACATCACTGAAAACCATATCGACATTCTCATCAGGCTCACCAACCATCTGGTGCCACATACCAGGGTAGATCTTGAGAGTCTTATCCTTGCTC ++ +CCCFFFFFHHHHHJJJIJIJJJJIJJJIJGIJJIJJJJIJJIGIJJJJJJIJJIHIICG;CGIJJIIJHHHHFF??AEEEDEACCD>->CDDDDDDD@CCC +@D7DHSVN1:151:D12V0ACXX:8:1101:16178:2104 1:N:0:CGATGT +CAATAAGCATCTTCCAATGGCATCCTCCAAAGTTTTTCCCCCATCACTTCTGATGCACTAAACACCTCACTGGAAAGTGCATCATTGGGTGTAAACACACC ++ +CCCFFFFFHHHHHJJJJJJJIJJJJJJJJJJJEHIJIJJJJJJJJJJJIJJJJJIJJJJJJJJIJJJJJJJJHHHHFDFFFFFECDCCDBBBDEFDDDDDB +@D7DHSVN1:151:D12V0ACXX:8:1101:16042:2196 1:N:0:CGATGT +CTGATGAGTATGAGGATTTACTAGGAGATTTTGAGGTTTGATGTCACGATGACAAACACCAATACAGCGATGAATGTACGACAAAGCTCTGAAAATCTGAT ++ +BCCFFFFFDFHHHJJIIJJIIIIIJFHFGHIJIHJJFHIJJJIJHIJIIIJIJIJIJJJIJJJJJJIIFHHFFFFCEDCCDDDDCCCCDDDDDDCCDDED@ +@D7DHSVN1:151:D12V0ACXX:8:1101:16029:2231 1:N:0:CGATGT +GTGGATGAATCGGACTTCTTTGTGGCTGGCCAATCTTCATCCCATTTCGTGCTGCTCTTAGCAGCAGAGACTGAAACTGTTCCATTCATATCCTTTGATGG ++ +@@CFD>DDHBFFGEHIJIJIJIAGIGGII):CHFGIH9?FBHD?BFGG<8B(-88@A=F:;)==26?3?ABDDCB>.;3.;>5>@D:(-(5;>;@C##### +@D7DHSVN1:151:D12V0ACXX:8:1101:16357:2009 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAACATCCATGCTACTCATCTTCCTTAATAGAT ++ +@@@FDDDFHFHBFHGGEEHIIEHGHHIIIDCDGHDHGHFBDGAC>CFEHG;@;@GCCEH)=AB###################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:16336:2095 1:N:0:CGATGT +TTGTGTAAGACCGTCTTACTATGCAATGGTTTATAAAACAATTTTGGAAAGGAGTACTTTTGAAAATAAAGGTATTTGTGAGTCATTACACAGCGAGATTG ++ +@CCFFFEFHHHHHHIJJJJJJJJIJJJJJIJJIJJJJJJJJIJJJGIIJJJIIICHIJJJJJJIIGIJJJHHCCHHFFFFFFCEEEEEEDDDBDDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:16253:2098 1:N:0:CGATGT +TCCGGGACCAGTAATTGAGTTCCCTGTTTTTCATATCTGTGTGCTATGTATGTTGTGATTGCTCTTGATTCAAAGAGCTTAGAGTCTCCATCTTCAAAGGC ++ +CCCFFFFFHHHFFBEFCGGHIJJJJJIJIJJJGJIJJJJIFHIIIIJJIJJJJJIIGIJJJIJJJIJEGJJJJJHFHHGFFFFFCEEECEEDDAC@>CCCB +@D7DHSVN1:151:D12V0ACXX:8:1101:16364:2115 1:N:0:CGATGT +GCTTTCTCAAGGGTTTCTTCAACCGCTGATTCGATAACATCAACAGCCTTGGTTGTCTCAGTTTCTTCAGGTTTTGCTTCCACCTCTTTCTCCGGTGTTTC ++ +CCCFFFDFHGHFG.FFFGFECBG?00940?FB######################################################## +@D7DHSVN1:151:D12V0ACXX:8:1101:16584:2011 1:N:0:CGATGT +TGAGGAAAGCCCCTGGTAAATAGCCCAAGACCAACAAGGGAAACCACTGGTACGGCAACAACCGGGGTAATCAGCCTTGTCATATTTCCCCATATTTTGCC ++ +CCCFFFFFHHHHHJJJGHIJJJJIJJJJIJIGJJJJJJJJJJJJJJJJJJCGIJJJJHHHHFFBDDD;?CEEDDDCDDDDDEEEEDDEDDDDDDDEEEDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:16714:2042 1:N:0:CGATGT +CCCAAAAATGTTTAACTTACAAACTCTTCAAAGTGTTCCAAAACACACATGTTTGCTCTTTTTTCACTTCTCTTTATGTGATTCTTAAGCAACATTACGTT ++ +CCCFFFFFGHHHHJJJJJJJJIJJJJJJJJJJIFHIIJJJIIJHIJJJJIJEIIJJJJJJJJJJIGJJJJJHHHHHHHEFFFFFFFCEEDEEDDDDDDBBC +@D7DHSVN1:151:D12V0ACXX:8:1101:16606:2070 1:N:0:CGATGT +GGAGATGCTACAAGTATACACGAATGGTATCTTTTCTGGATTATTTGCAAACACCGATGTTTATCTTCAATCCATTGGCATGTTTGTCGTCGAACAGTGAG ++ +@CBFFDFFHHHHHJEGGIJJJFIIJJJCHHHIJJJJIEHICHEIIJJIJIJJJJJGGIJ@FHIIJJJIJFHCHHGHFDDFDECE<@ACB?BBDDDDC@ACC +@D7DHSVN1:151:D12V0ACXX:8:1101:16502:2087 1:N:0:CGATGT +AGAGAAGCAAGTAATTAGGGCTGGATCCGGACCCAAACCCGTACCCGGTCAGAAAGTTACCGTTCACTGCACCGGCTTTGGGAAAGATGGGGACCTTTCCC ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJIJJJJJJIJJJHIIJJIIBHEFHFFFFFFEECCDDDCDCDDDDDDDDDCDCBAA?BCDDCD@?BDCDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:16609:2100 1:N:0:CGATGT +TCCGCTATGAGTGCTCGGTAAAACGACCATTTTCCTAACTCTTCCATATCGAACAATGGTGATGGTGGTGGATCTTGGTAGTCTTTTGCCATGTCTCGTGA ++ +:?@DB)=ADF>FFDE>A>(;;(55;;AB>>>:>BAAA#### +@D7DHSVN1:151:D12V0ACXX:8:1101:16661:2175 1:N:0:CGATGT +CAAACATCTTTACCATCACCATTCAAAACAATACTTTTAGCAAAAATAGAAGCTTCATTAGAAACCCTTTCAAGGTCCATTTTATATGCTTTTCCAATCAC ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJIIJJIIJJJIJJJJJJJJJGGEIJJJJJJIJJJIIJJJJJJJJJGIJHJEHHHGHHHFFFFFFFEEECEEEDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:16633:2184 1:N:0:CGATGT +CGCCGGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTAGACCCTACCTCCGGCTGACCCGTTTCCAGGGTGGGCAGGCTGTTAAACA ++ +@CCFFFFFHHHHDEGHHFDDEDDDBBDB6B9@?9B)67@CDDDCDCCD@@BBDAACDCCAB@@BD>BDDDDDAB>A?@CDD?@38B@ +@D7DHSVN1:151:D12V0ACXX:8:1101:16573:2198 1:N:0:CGATGT +GCGAGCTTTTACCCTTCTGTTCTACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCACA ++ +@@@DDFDFFFDDAHGIEEEHHIIHDHI;CDHIG4@CHIID>GEHHBDBCCCCC>CCA@>>CD@@>?@;DD@5=@',;?AAAA>5;B;BBDAAA>9:>>5;5>D?>>ABDDD@BDDD9>?>CDDCDAAC@B0 +@D7DHSVN1:151:D12V0ACXX:8:1101:16755:2145 1:N:0:CGATGT +CCGGTCTCGTCTGTCTGCTGCAACGGGGTCCGGAAGCTGAATAATTTGGCTTACACCACACCTGAAAGACAACTAGCTTGTGCTTGTATTAAGCAAGATAT ++ +@CCFDDDFFHHHGJJJJJJJJJJJJJII?FHIJBHGGIJECHEGJJIEGIJJAGHHFFGFFFEEEEEE;?CDDCDCCDCDDACCDCACEEDCCCCDDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:16777:2172 1:N:0:CGATGT +ATGTATACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAACTAAGGCCAGAAGCGTATCGCCGG ++ +CCCDFFFFHHHHHJFHHIJIJJJJIJJGIIGGIHIIIJJJJIJGGGIIFGIIJHIIIJJHEFFFEEDDDDDDDDDDDDDDDDDDD@BDDDA<8?BDB@BD@ +@D7DHSVN1:151:D12V0ACXX:8:1101:16797:2177 1:N:0:CGATGT +ATTAAAATGTACAGATAATCACATATACACATACATACATCATTTGTTGCCTCCTTCCCCAATGAGATAAGAGTTGTGGGTGGGTCATGAGCGAGCAGGAG ++ +@@CFFFFFHCFHFIJGHGIGGIJJJJJJJJJJJJJJJJJIIGHHIJJIIJIJJJJJJJIIJJJJCHCHIGGHH@FHEGCH=BDB9=;CCCCCD@BDBDDADDAA>>(;A5(>;55(,>5@DDC +@D7DHSVN1:151:D12V0ACXX:8:1101:16827:2238 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGCCGTCTGCCTTATAAACCAAATTACTCAAATTAGTACCCTTTTTCCTT ++ +@@@BDD6DA:F?D?FGHHDEG+AEHBCFG>GHFGG6@G?FDFCBFHHGFE-;EHEE>;;@@##################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:17108:2028 1:N:0:CGATGT +GGGAGCAGGAGTGATGCCAAATGCGGTGAACTCGTCAAGTACTGTTATCGGCAAGTGCCATTGTTTTGTATCGAGTTGTCAATAATCAGAATTGCTAATCT ++ +CCCFFFFFDFH?DGIJIJJIJJIIJJHHHGIHJIIIJII<FBDHIGGHGEHCHDFBBC>>?==C;@CCDECDCDC@CDCAACCDD34:4 +@D7DHSVN1:151:D12V0ACXX:8:1101:17201:2040 1:N:0:CGATGT +TTTCGCTCGATCCTGAGTGCGGAGCCTCACTTTTAGAGTCATTACCAGATGATGCCTGGGTCGAACCTTCTTTGCCGAGGGAAACCTTTCCAACTTCATGT ++ +CCCFFFFFHHHHHJJJJHIJJJIJJJJJIJJJJJIIIJHIJJJIJJIIGGEDEGHHAHH=7=8>AC?CAACCD@C:;=BDDDDBDBCDDDDE:3?ACCC>: +@D7DHSVN1:151:D12V0ACXX:8:1101:17003:2082 1:N:0:CGATGT +GTATGATTAGAGACTCGACTAGTCACTATGGCAAAAGGACTAGAAGTGATGGAGATGGCATCTCTATATTTCAATCTTCAAATATTTGGATTGATCATTGC ++ +CCCFFFFFHHHHHIIIIIIIIIDHEHIGIIGCHHIIGIHIIEIIIIFGHIIIGHIGIIGIGIIIIIIIIIGHGHHHHEHHEECCDDFFD>CCEDEDDCDCA +@D7DHSVN1:151:D12V0ACXX:8:1101:17102:2145 1:N:0:CGATGT +CTTGCATTAGCCACAGAGACCTTCCATATCCCTGCATGTTAAAGGCAACCATCTGAGCCCCATGCATCCACCCAATGAGAGGGTTGTAATTCGATGAGGTA ++ +CCCFFFFFHHHHHJIJJJIJJJJJJJJJJJJJJJJJJJJJJJJJJIJJJJJJIJJIJJJJIGHIIIJJGGHHHHFFFFFEEDD;ABBCDEEEDEEEDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:17165:2174 1:N:0:CGATGT +CCACTGTTGTTGCTGTTACATCTGATGCCGTTGAAAATGTCCTTGTTGATGATGATCTGACGGCTGCTGTTGATCCTTTAATCAGACAGGTTGCAGCTTGA ++ +BCBDFFFFHHHHHIIHIJJGIJJJIJIJIIJJIIJJJJFGIIGIIIJIGIJIIIIIJIIIIGIIJJFHEACEB@D;;@D>>CCECA>BC?5>CBC35>CC? +@D7DHSVN1:151:D12V0ACXX:8:1101:17098:2197 1:N:0:CGATGT +CTGGCAGTATCTGGTCGGAAAAAGAAGCTAACTGGTCGGAGATTAACCAGTTGTTTTTGTTCTTGAGCAAACGTATTTTTGATCAATCTTGGTTCATACAT ++ +CCCFFFFEHHHHHJGIJJJJJJJJJJJJJJJJJJJGHJJFHFHIIIJJJJGIJIJJHHHFFFFFFDEEEAEDD=BCDFEDDBDDECDDDDDCCBDDEDDCD +@D7DHSVN1:151:D12V0ACXX:8:1101:17019:2199 1:N:0:CGATGT +GTGTAATTAAGCAATGGGTAAAGGTCTTACGATCCACTAAAGCCCATACATACCAACAAGGCAACAACTAACTTGGTACATGCCTCAAATAGTTTTATTCA ++ +@@CDDEDFGDHFDEAGGHEIGGGIHHHIH@FHGHIIIHIJJG@FHIIEGHIJJJJIJIIGGGHGIFGIEEHHHEFEFEFFDEDEEEDCDCDC5@CC@CDDF +@D7DHSVN1:151:D12V0ACXX:8:1101:17147:2221 1:N:0:CGATGT +TAGGAGAGGAAAAACGAAAGAAAACAAAAAAGGAGAAAAAAATCGAAAAAATGCAATCTCCGAGAAATCGAACCGCGAAAAAACGCCGATCTCGAACAGAA ++ +@CCFFFDFGDFFDIIJHIDGGHIJJIJIIIIJGIIHIIIJIJIHHHFBEDD=CCDDDDDDDDDDDDDDCBBDD;@>BB>>>BDDBBBB95>BC?@CB +@D7DHSVN1:151:D12V0ACXX:8:1101:17353:2012 1:N:0:CGATGT +TGGAATTCGTCTTTGGGAACACATTGATCCAGATCTTCTTTTGGCTGTATTTCTTCCGGCTCTTCTGTTTGAAAGTTCATTCTCTATGGAAATTCACCAGA ++ +CCCDFFFFHFHHHJJJJJJJJJJJJIIJJIIIGJJJJGIJJJIIJIJGIJJJJJIIJHGJJJFIGIDHEHEHDFD>BDBCDEEEEC@>ACCDDDDDDDDD? +@D7DHSVN1:151:D12V0ACXX:8:1101:17275:2089 1:N:0:CGATGT +GCTGATCTTTTCTTTGCTTCTGTTAACCCCAAAAATAAAAAATAAAAATACATGATATGATGGCAACTCCTTGTCCTTTCTGAATTCTGCCACCTCTCATC ++ +CCCFFFFFHHHGHJJJJJJFGEHHGGIIJJJJIJIIIJJFHIDHGIJGHJGGGCGIJJJIGCH;FHGGIJHCC>EHDDFFFFDEEEDEDC@CCBDDCDCCC +@D7DHSVN1:151:D12V0ACXX:8:1101:17336:2105 1:N:0:CGATGT +CTTTTGGTTCCTTCCCCTTTCCTTCTTTGGCTTTCTCCTTTTCAGCCTTCTTCAACTTCTCCTTATCTTTTGCAATTTCCTTCTCAACTTGCTTGTCTGAT ++ +BCCFFFFDHFFHGGIIIJJJIIJJFIIIIIHIIJGJJJIJJJHFGGJIIHHHHHGIGIGIIIGGEHIIGIIIIIJGGHHHGHGHF3?CDFACAECCCDAAC +@D7DHSVN1:151:D12V0ACXX:8:1101:17408:2114 1:N:0:CGATGT +CACACCAGCATTCAACATGCGCTTTCCCTCATCTGTAGTTGCAGCTTCATCATGGTATTCGTACTGCTCTTTCTCAGTGCCATCCGTAGCTACCCATCCCC ++ +CCCFFFFFHFHHGIIIJJJJIJGIJJJICGBGEG@DGHFGHIIIECHICHHIIGGBFHIJF@AGGGCGGIIECHHEFHDDEEFFC3,.5;@ACCB:>C<25 +@D7DHSVN1:151:D12V0ACXX:8:1101:17251:2114 1:N:0:CGATGT +GGGCAAACGGCACGAAGGAGATAAGAAATAGATAGGGAATGTCTGATGAAAAATACATGTGCCATTGGAAGGAATCAACCAATGTTCTCTCTTACTTCGAA ++ +CCCFFFFFHHHHHJJJJJIIGJJJJJJJJJJHJJJJJIJJJIJJJIJJJJJJJJJJJJJIIIHHHHHHFCDEEEEEEEDD?BACDEEEDDDDDDDDDDBDD +@D7DHSVN1:151:D12V0ACXX:8:1101:17365:2118 1:N:0:CGATGT +CAGTTGCACTAAACTTAGCCCAGTTGGTGGCCCTGCTCAGCCAATCCAAATTGTCCCGCAAAAATGTATCAACAGTAGTACCAGCATGCATAATTGCATTG ++ +CCCFFFFFGGGHGJJIJHIJJHGHGII@CCDCDDD@CDDD> +@D7DHSVN1:151:D12V0ACXX:8:1101:17467:2172 1:N:0:CGATGT +CTCTTTTCCATTACTGTCCTCTCCTGACACATTTGGCACCTTGATTTCAGGCTCTTGGACCTCATTCTTCTTGGAGTCATCTCCGGAGGACTTTTTCTTCA ++ +@@@FDAEFF/;;ACC@CCCC@@ +@D7DHSVN1:151:D12V0ACXX:8:1101:17646:2110 1:N:0:CGATGT +TATCACCAACCATCAACTTCAAGATACTAATTGTGTTTTACAACAACAGGGAACACAATGGATGAATCCGAAGTTACAATTAAATTGACCAGGAAAACAGA ++ +CCCFFFFFHHHHHJJJJJJJJJJHGIJJJIJIJIIIGJJJJGIIJIJJJJJJIJGIIJIIIGCIIJJJGHHHFFFDEECEEDD:@D>CCDCBDDDDDCBC3 +@D7DHSVN1:151:D12V0ACXX:8:1101:17694:2180 1:N:0:CGATGT +CCCGAAGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACC ++ +<@@DDHGIEH>FG)?FHHIIFHIHE@C@A((,;;A;,(5;?BB3>CCC>::8850 +@D7DHSVN1:151:D12V0ACXX:8:1101:17867:2050 1:N:0:CGATGT +CCGGATTTTTCACAAGAACGTCAACAACAATATCAGCTCTATGAAGGTCAATGTGAGGAAGATGAATCCCCGAAATATCTGCAGTTGGCTTACCGAACCCA ++ +?@;1=ADD>F??FBG>:2A:A?F?D4*09B@BA/8))=CFFFII@)77@ECED<@(6;>:.5>--;5A:(5>@:8=BB@B@ +@D7DHSVN1:151:D12V0ACXX:8:1101:17967:2191 1:N:0:CGATGT +GTCCGAACACGACGGGGCTCTCACCCTCTCTGGCGCCCCTTTCCAGGGGACTTGGGCCCGGTCCGCCGCAGAGGACGCTTCTCCAGACTACAATTCGAACA ++ +?=?DFFDADFFHF:?EHEGBBBGHAGBF>FB<>AGGBEFCC>??23>@ABBBBB0777;B5;-5>888?><>79ACC@@:?CCCACC@C?:??B +@D7DHSVN1:151:D12V0ACXX:8:1101:17936:2194 1:N:0:CGATGT +CAGGGAAGTGATGATGATGGGGCAGATGATGGTGATGTATCGGAGGAAGAAGAGGACTCGGGGGTGGAGTCCCCTGTAGTTGAAAATGGGCTCGGGTTGCA ++ +???BDDBD:@:@############ +@D7DHSVN1:151:D12V0ACXX:8:1101:17949:2234 1:N:0:CGATGT +TTAAAGTTTGAGAATAGGTCGAGGGCATTGCACCCCCGATGCCTCTAATCATTGGCTTTACCTGATAGAACTCGTTTAGAGCTCCAGCTATCCTGAGGGAA ++ +??8:A2=BD,22AEDE@@EFFA88??C):9CD3;;;@;(.;3;;;>;=58(,>AA>3>:A>AAAAAAD####### +@D7DHSVN1:151:D12V0ACXX:8:1101:17992:2243 1:N:0:CGATGT +TCGCTGATGTTATCGCCTCAGCTTGCTGTGACGGCACACCTTGTGCCTCTAAGCTCTTTACAAGAGCGAGAGGATCGACAAGAAAAGCACGTTTAGGTTTA ++ +;=?DBDAD?ADDAC2+<@C<3AF@EEE@C*1?DD?DDID=DB?DB4=C8@DEDE>@@7AD:=?7?=?<'9??(;>A????=??><<38>>><8<<>AAA>3 +@D7DHSVN1:151:D12V0ACXX:8:1101:18196:2037 1:N:0:CGATGT +CTTGGTGTTATTATCTAGAATCCAATCGGAGGATCAAATGATATCCAACCGTTCAACTTGTTCTCGCTACTTGCCATTGCATACTGATACTTATCATCCAC ++ +@@@FFADDFADHDIIJGJJJJGHHIIJJJ;FDD9?DHGCGGGCIGFGIIIJCCHGCFHJJJIGI;?AE7?DD@>;(>;>>>C@@AC<;@ACDDD@ADCCAC +@D7DHSVN1:151:D12V0ACXX:8:1101:18027:2114 1:N:0:CGATGT +GTTCTGTGATAAGATGCCTGTGAAGATGACCTATTCCTTTGGTTTTCCCTTGCAAAATGACGATGACCCCTTCGCATTGCAGCAGCTGCAGCTAAATGCCT ++ +C@CFFFFFHHGHGGJJJJJIIFGIJGIGHHHIIJJJJJJJIJFGIJJIIJIJJJJIIJIJJIJIIJGHIJJJJHHEDDFFFEEEEECDDDCDDDDDDEDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:18140:2188 1:N:0:CGATGT +TGTACTCGTGCTCGTTAACACCAACAACGAACATAGGAGCATCCTTGCTGGGAGCAGAGATGATAACCTTCTTGGCACCACCCTTCAAGTGAGCAGCAGCC ++ +CC@FFFFFHGFHHIJJJJJGJJJJJJJIIJGIHIIIIGHHGIGIJJJJJJIJIJJIGHHHDFFFFFFCEEECEDDCCDDDDDDDDDCAACCCDDDDDDDDB +@D7DHSVN1:151:D12V0ACXX:8:1101:18151:2229 1:N:0:CGATGT +CACTCCCGGAGACTGGGTTTCCGTTGCCCTCACAATCCACGTCAGTCCGCACCCCGAGCCGATCGGCGGACCGGATTTAGGCCGTTCCGCATCCGACCGAG ++ +CCCFFFFFHHHHHJJJJFHIJJJJJJJJJJJJJJJJJJJJJIJJJIJJJJJHHFFFCDDDDDDD@BDDD@BDDD<@BDCDDDCD>BCDBDBDDDDBDDB79 +@D7DHSVN1:151:D12V0ACXX:8:1101:18205:2249 1:N:0:CGATGT +CGGGAGGGAAGCGAATGGGGGCCGGCGATGTGCCTCGGTCGGATGCGGAACGGCCTAAATCCGGTCCGCCGATCGGCTCGGGGTGCGGACTGACGGGGCTT ++ +CCCFDFFFHHHGHHIJJJJJJJGJJJJHFFFEEECEDD?BDDDBBDDDDDDDDDDDCDDDDDDDBDBDD?B>@BDBBDB-5<@)525@############# +@D7DHSVN1:151:D12V0ACXX:8:1101:18377:2005 1:N:0:CGATGT +NTTCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCC ++ +#4=DFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJIJJIJIJJJJJJIJJIJJJJJJJJJJJJJJGIGHGFDDDBBDFCDCDDDBDDD@BDDDDDD@DB< +@D7DHSVN1:151:D12V0ACXX:8:1101:18312:2015 1:N:0:CGATGT +CCGAAGCGACAAAGGGCTGAATCTCAGTGGATCGTGGCAGCAAGGCCACTCTGCCACTTACAATACCCCGTCGCATATTTAAGTCGTCTGCAAAGGATTCA ++ +CCCFFFFFGHHHHIJJIHJJHIIGIGIEHIHDGGDGIDGDGBFFFFFGGHJIHDFFFHDBEFFEEEACBDBDBD:@BCEE>D34>?8?8?C@@AC<1@A3: +@D7DHSVN1:151:D12V0ACXX:8:1101:18277:2040 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTATCATTAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTA ++ +@CCFFFFFHHHFHJJGEEGHJJJJJJJJIIHIIIJJGIIJGEIJIHCEGHJJJHIGHHEHFEGDF?DC?BEDCCCC@><913 +@D7DHSVN1:151:D12V0ACXX:8:1101:18386:2074 1:N:0:CGATGT +GCGGGTCGAGCCACCCTGATTCGGAAGACCTTGTCAAGGACAACTGGTTCGAACTCGGTCACTTCAGATGATGGTGGTGGTTTGGTGGGTTTAGGGGCTCC ++ +BCCFFDDFHHHHHJJIJJJJJJIJJJIHHHIIIIIJJIIJIJIJJJJJIJHHHHFFFFDDDDDDDCDDDDCDDD:>@=BD???CCBBBDD? +@D7DHSVN1:151:D12V0ACXX:8:1101:18495:2107 1:N:0:CGATGT +CCTGTACGCAAGGGCAGGATGGCGGGTATTCAATCATGAGGAAGAAGCTCAATACCATGGACAATAAGACCCGACTTATAAGAGCTGGTATCCACACCAGT ++ +CCCFFFFFGHHHHJIIIJIIJJEHIJ;BGIGIJJHEHGHHFDFDEECECEDDDEDDDDDCDDD@DDD@CDDDBBDBBDDDE:ACDDCD?CCCDDDDDDDD4 +@D7DHSVN1:151:D12V0ACXX:8:1101:18353:2150 1:N:0:CGATGT +ATGAGATTTTCAGGATTTTCGCCTGTTTCTTCTCGTCCTCGCTGAATGAGGTATCATAATCAACAAACTTCACAGCCTTTTCATATCTCCTAGATGCCCTT ++ +@@@FFDBDBDDDBBDGHIIBHGA@BEHII@@BDGGI8DB?6?BD?BFE?CEH@CEB?;@AC>CDCC@DCCC@(:C>AAC@? +@D7DHSVN1:151:D12V0ACXX:8:1101:18265:2154 1:N:0:CGATGT +GGTCTTTATAACCATTGAACTACCCGATGCAAAAGATGTGAAGTTGAAGCTTGAACCTGAAGGCAGATTCTGCTTCTCAGCCATGAAAGATGGCAACCCCT ++ +CCBFFFFFHHHHHJJIGIIIJGHJJJGIJJIJJJIIGGFHHGIHGBGGJJJGJIIJIGGCCGHGCGHIIHGEHHGC@BF>B;@C>CECC>@@A?CCDDBB1 +@D7DHSVN1:151:D12V0ACXX:8:1101:18461:2195 1:N:0:CGATGT +CGTTGCTCTTGTTTGCGCAATGTCTCAAACTTTTCCACGGTATCAATATCAATCTTATGCTTTGTCTTTGGCTTAGGTGGCTCAAAAGGGCAGGTCAGAAT ++ +CCBFFFFFHHHHHJJJJJJJJJIJJJJIJIIJJJIJIJJJFHHIIIJJJJIJJJJJJJJJJJJIJIIIJJFHGHHFDDDFDEDEECDDBBDBDDBD@CBBC>9> +@D7DHSVN1:151:D12V0ACXX:8:1101:18403:2245 1:N:0:CGATGT +ACGGAACTGGAATTTGTCATTCCATTGTGGGCAATTGTCGCCGTCTTGGTCGACCCGCGTCCGTAATTTTCGGGCCGGGTCGATCCATATCACGGCGTAGG ++ +CCCFFFFFHHHHHJJJIJIJJJJJJJJGHIJIIJJJHHJJJJJGIJJJIJJJJJJJGHFCDDDBABDEEDDBBDDBDBD5>BB +@D7DHSVN1:151:D12V0ACXX:8:1101:18321:2246 1:N:0:CGATGT +CCGTTATTGTTGATTGCTTTTTTTTCTATCCTTTTGTCCTTGAGTAGAAATCGTACTATCTCAGGTTGTTTAGCCGCAACAGCTAGGTGCAAAATAGTATT ++ +@CCDDDFFGFFFCGIIEGHIIIIIIIIGFEGIIIICGGIAHBDD?BFCGEEHGDHIGIEHIHHE>=ABB=CC@C@A;@=?BBD:C(<+>C@C>CCCDCDEB +@D7DHSVN1:151:D12V0ACXX:8:1101:18516:2009 1:N:0:CGATGT +ATGATCTTACAATATATATCATTACTAACATGTTAAAATATAAAAGCCTTACTTTTATCTCTCAAATTGAGAGACATGTATTATTATTATCATAAGACTAT ++ +CCCFFFFFGHHGHJJIJJJJGIIGJJIIGEIGIIJJJIJIJIJIJDIJIJGIJIJHJJJJJIJGGIHJIGICHGICGIGHHIIGCHHFHHHE?CCDFF:;@ +@D7DHSVN1:151:D12V0ACXX:8:1101:18576:2016 1:N:0:CGATGT +CCAATGATCAAGTCGGGTTTGGCTTGCAATTCTGCTGAAATCTCATTTGCAACATCCTCAGTGTAAGTCTCAAGGTATGGCCAGACTTCGAACCTGGAAAT ++ +CCCFFFFFHHHHHJJJJFHIHIIGJGGGHGJBGDGGGGGGHGICCHHHHHHAADDFFFC?ABDDCBBDBBG8E?C9?DFE>GB@G999?F;B@@BB().65@E@EE7?;7;);;,;?=;@B?63==?B:(+:((+>>AAAB### +@D7DHSVN1:151:D12V0ACXX:8:1101:18645:2191 1:N:0:CGATGT +CTAGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGGACTCCCTA ++ +CCCFFFFFHHHHHJJJJJJJJJJJJHIJJJGJJJBGIJFIIJIJJJJJHHHHHFFFFFDEEEEEDDDCCDBDDBDBDDDDDDBDDDDDCDD<>BBDDDDC> +@D7DHSVN1:151:D12V0ACXX:8:1101:18603:2230 1:N:0:CGATGT +GGCAGCTAATGTCATCGGCGCTGGGAACTCCCTCAATGTATCAGCCTGAAGTACAATACTGGCTGACAAAGCAAAGACGGCTCCCATTAGGCATAAAGCAC ++ +CCCFFFFFHHHHHJJJJIJJJJJJJHJJJJJJJJJJJJHJJJJIJJJJJJJHIJJJJHHHHHHFFFFEEEEEDDDDDDDDDDDDDDDDDDDDDCDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:18935:2082 1:N:0:CGATGT +TCGTGCTTTATCATCTAACGGTAATTCATCTCCCGCCATTTTTAAAATTCCGAATCTGAAGTTCAAGTTGGGGGAAAATTAGGGTTTGTTAAATGAAATTG ++ +@CCDFFFFHFHHGJJJIIGGGIJIJIHHIIIJJI@@@CB,98?AC>ACEE>3@CCC +@D7DHSVN1:151:D12V0ACXX:8:1101:18852:2128 1:N:0:CGATGT +GAGATTACTAAAGCAGAACTGTGGATGCTGAAGTCAGCTGGTGTTCAGTGTGCTGGGAGTCCTTGTTTTTGGGTGGACTCAGATGGAACCTATCAAGAAGA ++ +CCCFFFFFHHHHHIJJJJJJIEHJJIJJJJJJIJJJJIJJJEHHJJJJDHGHIIJIJJJEHIIIJIIJIJGEF;?BACCCCDCDDDCDCDDDDDDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:18955:2133 1:N:0:CGATGT +CCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGA ++ +BCCFFFDEHHHHHJJJJJJJJJJJIJJIJIJIJJJJJJJJJJJJJJJJJGJJIJJJJJIIIIJJGHFHFFDDBDDDDDDCDBDDBDCDDDCDCDDCDDCDD +@D7DHSVN1:151:D12V0ACXX:8:1101:18895:2134 1:N:0:CGATGT +CCAAGATCGACAACCCTAAGTGTGAGGAAGCACCTGGTTGTGGAGAATGGAAGAGGCCAATGAAGAGGAACCCAGCTTACAAGGGCAAATGGCACGCTCCA ++ +CCCFFFFFGHHHHJJIJJJIHGHHBGIIJGGGJIJIJGGGHHGBGAGGGGCHCHJEIJHHHHHFFFFEDEEDBDABCCACDDDDBD@DBCDDBDDDDB@B@ +@D7DHSVN1:151:D12V0ACXX:8:1101:18932:2147 1:N:0:CGATGT +CGGGGGGTTTGAATGGATAATCTGGGGGGAAGTGAATAGTGACAAGAAAAACTCCCCCAGCATAAGGACTGTCAGGAGGACCCATAATAGTTGCTTGCCAA ++ +==@?;:1)0<8>AACCC>@C>CADCCBBB1@B388>>@C8>>>C>@889<@5C3@?6@<8<<3@@C>>?C@>CAC?+8?CF<@GHIIIICFC?DGEC:DDFGGGBGE>DFAFHIIFAFBEHHEHEBCA;AC>>CC>:;@4>: +@D7DHSVN1:151:D12V0ACXX:8:1101:19048:2096 1:N:0:CGATGT +CACAAATTCTCCCAGCACATATTTGTTGCCTTTGAGTTCCAGCCTGTCCCAGATTGGAGCAGTAGCAAGTACAAAATGAAGGTGTTGGTGAATAGGGTCCT ++ +BCCFFFFFHHGHHJJJJIJJJJJJIJIIJJJJJJJJHIJIJJJJIIJJJJJJIFIGHIIIIJHIIJGHIGGIIEHEHHHGHEDFF=ACABCCDDCDD>AB@ +@D7DHSVN1:151:D12V0ACXX:8:1101:19200:2106 1:N:0:CGATGT +GTGGGTCCATTGGTCCCTTGAAAGGCCTTCTTTAGGTACCCCTTTTCTAGCCCAAGGTTCTCACATAACAAGTCCAATAATTGCTCCGCTAGCTCCTCTAT ++ +CBCFFFFFHHHHHHHJJJJJJJJJIJJJIJJJJJJJCGHJJJIJJJJJIJJJJJJJJFHIJJIJJIJJJIJJHHHHHHFFFFBDEEEDDDDDDDDDDDDAC +@D7DHSVN1:151:D12V0ACXX:8:1101:19015:2178 1:N:0:CGATGT +TTCTTATTCGGCGAGGTACTAATAACCGTAACCTTAACACCAAACGCCTTAGCAAATTTCACCGCCATATGACCCAACCCACCTAATCCAACCACACCAAT ++ +BCCFFFFDFHHHHJJJFHIJIJJJIJJJJIJIJJJJJIGIIJJJGIJHHHHFFFFFFEEEEECDDDDDCCDEDCDBBCC>>CCBADD@B@BBCCDE@A?@:A::;;>AACABB +@D7DHSVN1:151:D12V0ACXX:8:1101:19129:2229 1:N:0:CGATGT +CCCGTATGTGGTGAGAACAACATTACTTTGAGCTAAAAGTTCAGCACCTTTTGATCGACCTTGTCCATAATAAACACAAACAGACAAGGAACCAGGCTGAG ++ +?@@DDDDDDHHAFEHIGGIJIGIJJIJJIGGHIIIJJJGCGIGJIJJJJIGHCGIIJB;BBDCCDDDC@5>3?B93< +@D7DHSVN1:151:D12V0ACXX:8:1101:19345:2002 1:N:0:CGATGT +NAAAGATTTGAATCTAATTCCCCAAAGCTTTCACCCTCAACATGACAACTGACGATGCTCATCTCTGGTTCTTCAAATACAACAAAGTCCAATCCCTTAAT ++ +#1=BDFFFGGHHHJJIJJJJJJJJJGIIJJIIJJJJIIIJJJJGJJJJJJJIJJIJHIIIIIIIJIJIIIIHHGFHEHEDFFFDDEA>CDDDDDDDDDAC@ +@D7DHSVN1:151:D12V0ACXX:8:1101:19484:2020 1:N:0:CGATGT +CTGAATAGAATGTACCGAAAGAAAATGTAACTTACTTGTTGGAGTTGGAGATATACATTGAAAAACAGTAGCTTATTACTTTCACATCCTTGGAGGCCATT ++ +CCCFFFFFHHHHHIJIJJJJJJJJJIIEGIJJIJJJJJJJIJIIDHIJIJGGIJJIJIIGIJJJJIJIEHIJHGGHHHFFFFFFFDEDEEEDDDDBDDDD@ +@D7DHSVN1:151:D12V0ACXX:8:1101:19352:2040 1:N:0:CGATGT +TGCGCATTAAAGTATCCAGATCGGTTCCCGTTCCAGAAGAATGTCACATGTCCAAACTTGACGGTTTCACTGCAAGCAAAAGTGCGTACACCATTGTGAGT ++ +CCCFFFFFHHHHFHJJJJJJJJJJIIJJJJIJIJJJJJJJIIJHIJJJIJIJJJJJJJJJJJJJEHHHHHGEFFFEDEEEDD>CCD@BDDDDDCCCDCDD4 +@D7DHSVN1:151:D12V0ACXX:8:1101:19269:2085 1:N:0:CGATGT +GCAGGAAAGATTATCAATTTGATGCAATGCCTCATTCCCATTCCTATTGATTGCGAAACAATAGGGTATGAGGGTACACAAGCATCACATAACAAATACAT ++ +CCCFFFFFHFHHHHIJIIJJJJFJGJJEIIJGIJHGIIIJGIIJJJGIHIIJBHHIGHJIDGHGIG=DGGGGHH?=@DFFFEDEDEDDDDCCDDDDDCDD; +@D7DHSVN1:151:D12V0ACXX:8:1101:19328:2116 1:N:0:CGATGT +GTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACCTTGGGGGG ++ +@@@DFBFFGGF?AEFHJCFFHIJIJJDGAHII:DFGIFIGGCIGHCGIHIGHHFFFDFFDEC;BCA?BCDCCDCECCDB?CA;9 +@D7DHSVN1:151:D12V0ACXX:8:1101:19290:2185 1:N:0:CGATGT +CTAGCTTGCAACCTCTTTACAATCTCATATTTGTGCTCAGGGAAAACGCCCGCGAATCCATCAGCTTTTTCTATCAGATCATCGATTGGCAAAGCAGCAAT ++ +BCCFFFDDFHHHHHIIJGIJIEIJIJJHHIIJCCGHIIJJJJIIJJIIIJGGHIHEBFFEFECAC@CDCDDDEEDDEDDCDDDA?BCBBBEB+AC;;A?C@(;>?99?########### +@D7DHSVN1:151:D12V0ACXX:8:1101:19690:2092 1:N:0:CGATGT +GCCAGACAAGAGATCCTGGTATACGAGCATGATTGATGGAGTTGAGTGAGATTTCTCTCTCTTCGACCACTTCCTTGTTCCTCGCTGAGGAGATTTAACGG ++ +CCCFFFFFGHHHHJJJJJJIJJJJJFIJGIIJJJIFIJJ>FBFGHEBGHIGIJIIIJJJJJJJJE@EHHGHFFFFEEDECEEEDDDBBDDDDAACCCACBD +@D7DHSVN1:151:D12V0ACXX:8:1101:19738:2097 1:N:0:CGATGT +TGGGTGGTCAAGGTCCCTCATCTGTGGCAGTGGGTGGTGCTGGGGGTGGTGGTGCTGGTGGGTATAGTGCTCCTTTAGGCGGGGCCTATGCTGGGTCTCAG ++ +BBCFDADDFHHHGJIJJGIIIJJJHIDEDGFHIE6DE?DEEHI(AC;ABD8:5;C3>A:ACD@@CCDDBB################### +@D7DHSVN1:151:D12V0ACXX:8:1101:19502:2102 1:N:0:CGATGT +TGGGTTTCATTTGCAGGTACATGGGTCGCACTTGCAGTTGTCTCCGCACTTGCATCCTCCGTCCTCTCCACTCATTCCCATCTCTTTGTTGTCCACGTACG ++ +BCCFDDFEHHHHGJJJJEIIJIJJJGHIJJJJJJJJJHIJJJJIIJJJJJJJGIJJJJJHHCHFFDEEEEEEDDDDEFDCCDDDDDDDDDDCDCDCDA9A@ +@D7DHSVN1:151:D12V0ACXX:8:1101:19531:2128 1:N:0:CGATGT +GGAAACGTTCACGTTGTTTGCGCCGAGTTCGAGGTACGCTTTGTGGGACACTGAGTGTCAACTGCCCCAAAAGTGTGGGGAGTTGGGGCTTTGTGAGGATA ++ +CCCFFFFFHHHHHGIJIJJJJIJJJIJGGIJGIJFHIJJIJJJHIGHHHGFFFFFCEEEEEEEDDDDDD@BDD@ADDDDD?B?CDCDDB@DCDCCCDD>>: +@D7DHSVN1:151:D12V0ACXX:8:1101:19669:2166 1:N:0:CGATGT +CCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATAATGTTATCCCATGCTAATGTATCCAGAGCGTAGGC ++ +?8=?4)AA<<C:AE9A9F?FE:??D10?DD0?2B?-7<;;;A@CCADA??'(..6;;>;5>55BDAAA>A9>>:>>A;>>BAA########## +@D7DHSVN1:151:D12V0ACXX:8:1101:19664:2187 1:N:0:CGATGT +ATACAATTCCATATGGTGCAACATGACCAATAACAAAGCACAACAATGAAAAGAAGGATAGATAATTTAGAGACAACAGTGCATCCAAGTAAATGATACAA ++ +@?7DDDDD8B>F>C?:ABB;ABBAAB@ +@D7DHSVN1:151:D12V0ACXX:8:1101:19595:2241 1:N:0:CGATGT +GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGAGGTATCTCGCATGCCGACTTCTGCTTGTAAACTAGGCACTAGGCATGGTAGTTGCCTCCATGCGG ++ +?;@BDDD=F8?+A+CFGA@FAFE################################################# +@D7DHSVN1:151:D12V0ACXX:8:1101:19893:2049 1:N:0:CGATGT +CATGAATCATCAGAGCAACAGGCAAAGCCCGCATCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAA ++ +CCCFFFFFHHHHHJIJJJJJJJIJJJJJJIJJJJJIIIIC: +@D7DHSVN1:151:D12V0ACXX:8:1101:19823:2093 1:N:0:CGATGT +CTTTCGATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGGTCACATGGAACCTTTCCCCGC ++ +@CCDFDDEHFDHDHGIDHDHIB:FHFF?BAAEAAE?'(;@AA9',8?9@:,>5>C3:+&25>>8<893::::4>>A(:9&05>C:C>9:@>@3>ACCCC## +@D7DHSVN1:151:D12V0ACXX:8:1101:19896:2109 1:N:0:CGATGT +CAGCGATCTCTTCCCCAGGTTTCTTCGAATCAAGAACTCGACATATCGTCATGGCCAGTTCATCTCGTGAAAGTTGTGAGGCAGTTCTTTGTACTATTTGA ++ +@@@BFDDDHFHFFIIGIIEEGHDHIBGCDFGGIIGHGHIIIICG@;A;;163(;;;?3;>AC55>>;ADAC>: +@D7DHSVN1:151:D12V0ACXX:8:1101:19919:2123 1:N:0:CGATGT +ATAGTAATCAATGTTTAATGTCATACCCGACAATGACCACAGCTCCAGCTTTCCCCTTGAGCATACTCTTCCCATGGCGAACAACGGCTGTGAATCTTTAA ++ +CCCFDFFFGHHHHIIJJJJJAIFIJJJJJIJJJJIJJJJJJIIIJJJGIJIJGIIJJJIEGIJJIGIIJHHGGFFEFFDDDDDDDDDDDBACDDCDDDDB58AC>AD@>>@A?A<8&4:@:> +@D7DHSVN1:151:D12V0ACXX:8:1101:19765:2133 1:N:0:CGATGT +CCAGTAACGGAAGTATGAATCTCGATATGATCGGTTTTCCTTTTTTGTAGACGACTTTGGCTTTTTGGAGGATCGTGGAGCTGATACTTTTTCTGGGTATT ++ +CCCFFFFFHHHAHEGIJJJJJJJJGIGHIDIIJJGGIIEHIIJJIJGFGIIJGIIJHGHGFFFFFDCC>AB?CDDDBD7?A?CACCCCCDDD?C>>?9>C> +@D7DHSVN1:151:D12V0ACXX:8:1101:19780:2149 1:N:0:CGATGT +CACCACTTCGCTGAGGACTCACCCCATGCAATTCGAAGTACAAAGTTGAGCCTAATCGAGTCTGAGATTTCTCATCATTGTCCTGTGTATCAGATGGAAAT ++ +@CCDFFFFFHHFHBGEGHIGIJJIJCHCDHIGIGIGHIIJIHIIJFCFGHJJJJGI>FGHEHIF@EHEEB@EFEFEEECEEEDDC@CCDCDDCD<>ACDC3 +@D7DHSVN1:151:D12V0ACXX:8:1101:19887:2173 1:N:0:CGATGT +CCCCACCTGACAATGTCCTCCGCCCGGATCGGGCCCCCGGCGGGGGGGCAGCCGCGGAAAAAAAGGCGGGGGGCGGGCCCCCCCTCCCCCCCGACATGATA ++ +@@@DBDDDDBFFBGFHIGGFCAGGIGGII?####################################################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:19912:2174 1:N:0:CGGTGT +GATCGGAAGAGCACACGTCTGAACTCCAGTACGCCAATATCTCGTATGCCGTCTTCTGCTTGAAAAGAAGGAAGGAATTTGCCAGCAAAAACCAGGGGAGG ++ +@<8BDDDAFHHDH;CAEAFEEHDHI>FCEDF9:?@AH;@898?DB######################################################## +@D7DHSVN1:151:D12V0ACXX:8:1101:19757:2182 1:N:0:CGATTT +CGAGTCAGACGAACGATTTGCACGTCAGTATCGCTTCGGGCCTCCACCAGAGTTTCCTCTCGCTTTGCCCCGCCCCCGCATAGTGCACCCTCTTTCGGGTC ++ +=+=:DDDB4A?:CECEE3;F4CC?ED;8*::?)?################################################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:19929:2184 1:N:0:CGATGT +GCCGTAGCGAGAAAGGTCGCTCCCTGTTGGGGCGAGTAGGTGAGGCCCCTGATGCATAAGAGAAGTGAAGGCATCCTTGGGCAAGCCAAAACCAAGGGCAG ++ +CCCFFFFFHHHHHJIJCGIJJJJJGIGIJIIIIJGHADFF@CDED@DDDDDDDDDDEDDDDDDDDCCDECDDDCCCDDDCDDDDDDDDDDDBDDD?@DBD# +@D7DHSVN1:151:D12V0ACXX:8:1101:19945:2225 1:N:0:CGATGT +CTTGGCCGACCACTCGTCGCCGGATTTCTTGCATACGAATGTGTAAACACCCATTGCCGGAGATAAAGGAGATGGGACGAGAGAGTTGTGGGTGTGAGAGA ++ +B@@FFFFFHHHFHJIIHIJJIIIJJJJJJJIJIJJJJJJJJIIGIHHHHHFFBEDDEEDD@DBDDDCDDBBDDDDDCA>9B@BBD:@CA?BD595<:C3:8 +@D7DHSVN1:151:D12V0ACXX:8:1101:19876:2236 1:N:0:CGATGT +CCTCTGTATGTCAAGGACTCTTTACCGAAGCCAGCAAGATGTGGTGCGAATGGCATCATCCATGAACCCACAAACCAAAATGAAGCAATCCATAATAGCAT ++ +@CCFFFFFHHHHHJJJJGIJJJJJJHIGIIJIJIJAHHIJJGI39DHIJIJJJJJJJJIIJIHHCHGHF;?BABCDBDD;ACDDCDDCCDD>@ACDDCCC> +@D7DHSVN1:151:D12V0ACXX:8:1101:20218:2007 1:N:0:CGATGT +NCACTCATCAAAACCAGTATCATCAGCATCACCAGTTTCAGCAGGCAAACGGGTACCATGACCACTATAATGAACAAAGAGATAATCACCAGGCTCAGCTG ++ +#1=DDDDDFHHGFIIJIFHGEGIJJIJEGBHHIJIGHI@FHEHIIIGGIIIHH7@FHIGIECEG@CDHAECCHCDDDFFEECCEDCCCACDA@ABBC>:@5 +@D7DHSVN1:151:D12V0ACXX:8:1101:20219:2030 1:N:0:CGATGT +CGCCAATCTCCCTCATGGTGTCAAAATATTGGGTCACCAGGACCATGTCCATGATGTCCTTGGCAGTAGTGCCGGGCACATTCTCAGAGAAGTTCAGCACA ++ +CCCFFFFFHHHHHJJJJJHHHIIJJJJJJJJIJGGIJJJJJJIJFIJJJJIIIJIJIIGGGEEHIEHGIIIIHHEFCDBCCDDEDDCCDCDDAAACDACB3 +@D7DHSVN1:151:D12V0ACXX:8:1101:20126:2038 1:N:0:CGATGT +CTAATTTCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAACTAAGGCCAGGAGCGTATCGCCGGCAGAAGGAGCAAGACGACCGGTGCACCCCGAAA ++ +@;@D?DDDFDF?FFHIIIIE988?@B??#################### +@D7DHSVN1:151:D12V0ACXX:8:1101:20224:2057 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAGACACAACATCAGCGTCAGCGATGTCACGCTCG ++ +@@@ADDADADHFHIIIIGGGGGIIEIGGHGHEC>HI8?8889??B2-7B;CGG5@############################################## +@D7DHSVN1:151:D12V0ACXX:8:1101:20187:2074 1:N:0:CGATGT +ACGGGGGTGATCTAAGAATACAATAGATATGGGGAAGGCTGTTGTTGTTCTTACCAGCAGTGAAGGTGTCACTGGAACTATCTACTTCGCCCAAGAAGGCG ++ +@CCFFFF?FHHHHJJJJJIJJJIJJIGHIEIJJJIJJJJJICEHHHFFFFFDDECEEDDDCCDECD>C>CDDDDDCDDDDDDDDDECCDDDDDDBDDDDD9 +@D7DHSVN1:151:D12V0ACXX:8:1101:20034:2136 1:N:0:CGATGT +ACCAAGATCTGCACCGACAGCCGCTCCGCCCAGGCTCACGCCACAGGTTTTGCGGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGTACTTGCCCCGA ++ +CCCFFFFFHHHHHJJJJJJJJJIJJJIIGIJIHIHJJIJJJJJJFHHAADDFEDDDDDBDBDD@@BBB@>?BD@C>CDDD<5<><@?@B3:@>CCACDDB# +@D7DHSVN1:151:D12V0ACXX:8:1101:20097:2206 1:N:0:CGATGT +TCTCGCTTACAGACCAAGCCGACCCTTCAATGTAAATCTTGTATCTGTGTATGCATTGATGTGACAAATCAGACTCCTTGAATCCCTGCCGCACTTCTTTA ++ +CC@FFF?DDHHHHJJJJIIGI8FGIJIGGAGIDHEHIJIJ@@FCGIJCHIIIEIGGGGEHGDEEGIEEHHHC?BDC>B>CCECECCDABBBD:BDDDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:20194:2243 1:N:0:CGATGT +ACAAAATTGTAATCAGGACTTCTCCAGTATGTCCACCATTGTTTCCAAAGGCATGATTTAAACTGACCCCATGTTGATTGGGCATATTGGGTTGGAAAATA ++ +CCCFFFFFHHHHHJJJJJJJJJIJJJJEHGIHIDHIJJIJJGIJIJJIJJJIJJJGJJJIJIJIIGIJJIIIJIJJIHGHGHFFFFFFDEDBDDDACCDCA +@D7DHSVN1:151:D12V0ACXX:8:1101:20400:2056 1:N:0:CGATGT +CGAGAGAGCAGAGAGCGAAGAGAAGGGTCGTTGTCGATGAACGAAGTGAGGAAAACGGTGCCGTTTTCGACGAGGGGACGGAAAGAGAAGAGAAGAAGAGA ++ +CCCFFFFFHHHHHIJJJGIECFFGHIJBFHIIJCGGHJJJIIIIIIDHHFFHEEFFBC;A:CB?@CDC@?@B@BDB-5>@B5<3>339<9 +@D7DHSVN1:151:D12V0ACXX:8:1101:20337:2063 1:N:0:CGATGT +GGCCAAAGTACTTGTCTCCGACGAGGCTCGTAAGGAATTCTCTTCTCTCCGTCGCACTTTTGACGAAGTCAACCTCCAACTCTCCACCAAATTCTCTCAGG ++ +BCCFFFFFFHHHHJJJJJJJJJJJJIJJII@GHEHCHFIEHIJIGGDEGHHCHEFDD8ACD;=@@BDDDDEDDD??B9??9@>>C:9AA?B3:ACCCC>C9 +@D7DHSVN1:151:D12V0ACXX:8:1101:20324:2103 1:N:0:CGATGT +ATTTTATAACAAGGGAGGGTTTGTTTGGATGGAGTATTATTTTACAAGAGGGAGTATCGAAAATACAAGAATGATAAGATGAAAAAAAAGGGGGTGAGGGG ++ +@@@DDDD>FDDHHEG?FFG1ACGGCG@G?CFEHD?DF@CDEEECCC@;>CACCC>CCACBBBB>?<>@####### +@D7DHSVN1:151:D12V0ACXX:8:1101:20468:2122 1:N:0:CGATGT +GTGGCTTACTTGCATCATCATGGCTATGAGGATAAACTTCCTTGGTATCGTGGAGAGGAATGGAACTACCTTCGAGGAGGTCTAACAACGCTTGACCGTGA ++ +@@@FFADDFHHGFCGBGIIGHIIIIGHF>HI@FFACHIGAGHGGC?DGCHHHBDGBFEAH@HIIEGIGGIIFHCHFDEBC(;ACC>CCBBBBB8?C395?< +@D7DHSVN1:151:D12V0ACXX:8:1101:20357:2123 1:N:0:CGATGT +GTGTAGTGCTAGTAGTAGATGGAGAATTCTCCTTTTGTTTGCTCTCAAAAAAGGTTGATCCTTTCTTGCACGCTTAGCCGTCTTGTAAGTTTAGGTGTCTG ++ +@@@DFFDEHGHGDIIHIJJIJJ@GBGHIGIIIJIJJJGIJGGBDGGHIJIGIIJIIJJJJIJGIGIIIFCHGHHF>>CED8@A@CCCDCCDDACDCC::>> +@D7DHSVN1:151:D12V0ACXX:8:1101:20336:2159 1:N:0:CGATGT +GACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGCATAAGTGGGAGCTTCGGCGCAAGTGAAATACCACTACTTTTAACG ++ +CCCFFFFFHGHHHEIIIJJJJIJIJJJIJGJJIFGGIIJJGGIIIDHDIGBE3BFGEIIJIAGHIIHHFFHDEDDD/;?:A>CCCCCCDDA?CDDDDDDC< +@D7DHSVN1:151:D12V0ACXX:8:1101:20434:2160 1:N:0:CGATGT +TGGCATGGACATCTAAACACATCTTAACCATGAAAGTCCGCCTTGATGAACAGAGAGTTACGAAGGCGGCCTCTCTAAGCAAATTCCTGGAAAGAAGTTAT ++ +@CCADDDDFFHGHBGHIIIICHIIGIEGHIIIHBGGFHGHBHEGIIIIECGHGHGHIBCBDH(@GIEEFBBCCCCCAA@C>>>CACCC:A;@;BEFCCCCBCCCCDCC>:@CCCA:ACCCCC> +@D7DHSVN1:151:D12V0ACXX:8:1101:20357:2188 1:N:0:CGATGT +CGCGCGGCGAGAACGGGTTGCTGCGTGCCGGCCGGGGGACGGAATGGGAACGGCTCCTTTTGGGGCCTTCCCCGGGCGGCGAACAGCCGACACCGAACTGG ++ +?1;DD1)0:DAA::>>B:C:A8ACC8@@C;@9CAEH@@?B@DECC@C@C<@C3;?@ +@D7DHSVN1:151:D12V0ACXX:8:1101:20607:2118 1:N:0:CGATGT +TTTTATATTTATATAAAAACTATTATTTATATTAGAATAAGATTATATTTTCAAATTCATGATATTCTAAGATATTCTATTCATCAGTAATGTTGATGATT ++ +:?@DDD,A:CDFBAB>A@EHGEHI@FH9AFDHI9A@?DFHHIGGIIEB>GIIBAEGHICHHCG@D@EI;.=;3?AE## +@D7DHSVN1:151:D12V0ACXX:8:1101:20616:2168 1:N:0:CGATGT +CCGTCGTGTTCGGACCCTGTCGCACCATGAGGCGCTGTCGCCGAGTCGGGTTGTTTGGGAATGCCCCCAAGCGGGCGGTAAATTCCGTCCAAGGCTAAATA ++ +BCCDFFFFFHHGGJJJJJIIIJJJJJJHIGIIHGGHJBHGHHH?A;@BDD5B@9&)+4::>CC4<><:48<(:AC:A +@D7DHSVN1:151:D12V0ACXX:8:1101:20577:2231 1:N:0:CGATGT +CCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCC ++ +CCCFFFFFHHHGHJJJJGHJIJJJIJJIJJJJJJJJJJIJJIII +@D7DHSVN1:151:D12V0ACXX:8:1101:20990:2014 1:N:0:CGATGT +CCTCCTTGTGAGGATTATCTCCTTCTTTATGACCTCCAATATTGAGTTTCTCCTGTATCGTGTGAATAATGCCTGCCATTTTTGTGTTTGTTTTAATTTGG ++ +C@CFFFFFHHGHHEIIFEHJJJIJAHIHCHIJGGIIGFGHIJJFEHIJJIIJIGIFGIHEEGHGGGEGEGCFECECGHGFHHG'.;@BCCACEC:;@ACC# +@D7DHSVN1:151:D12V0ACXX:8:1101:20856:2054 1:N:0:CGATGT +TCTCAGCACAAATCTCAGCCTTGCACACAATCCTTGTCCTTGCAAGGATCTCGCCATACTCTTCATACAAAGCAGGATCAGAGTCTGTACGATTATCAATG ++ +@C@FDDDDHHHHFIIJJJJJJIGIJJFGHGIGFHIIHGIIDGGBEGICIGIJIJIJIHIHHGIIIIIGIGHGHEFF?DFCE3>.>@C>;CDBDDBDCDCC3 +@D7DHSVN1:151:D12V0ACXX:8:1101:20967:2118 1:N:0:CGATGT +CTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGGATGCTCTCACTCGAACCCTTCACTGAAGATCAAGGTCGGGCGGCGGTGCACCCACAGGGGAGC ++ +?<@D7:BBFCFCFHIIGIEFGDGEHGGIGBFD0FDDC)?8?DHGEIE<@FF;==@86=?BEE@D>@36>6;A@@C82',5@0<955>CA>?2?######## +@D7DHSVN1:151:D12V0ACXX:8:1101:20969:2158 1:N:0:CGATGT +ACCGGATTAAACCCACATGAACCAAACCGGGTTCTCCATTGAGCCAAGGACTCGTGCCTCTCGAACCGGTCCACCCCTTCACATGCCACTACATTGCAAAT ++ +CCCFFFFFGHHFHJJJJJJJIIJJJJJIJHJB>EFHGGEF?F@@@FGGHDIGGHD::><8<55ABB><>B@93&00509??BBD####### +@D7DHSVN1:151:D12V0ACXX:8:1101:21175:2092 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAATAAAACAAAGAAGATTGACAACAGA ++ +@@CFFFFFHHFFHJJJJJFIJIIJJJIIIJJJJJJJEIJGGIIIGIIJ9CCHGIIHHEECAEF?6?BC@?############################### +@D7DHSVN1:151:D12V0ACXX:8:1101:21165:2213 1:N:0:CGATGT +CCCGATTCCCTTTCGATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGATCGACTAAACCATGTGAAAGTGCCGTTCACATGGAACT ++ +@@CFFFFFGHHHHJJIIGIIIIJGIJJEHIGJEGIGIJJDBECC;;B<5?CBB5?@(9CECE>C?=;8;@>C>C>?A8<H@;CG3C@HG:DEGGG99D9099?BE8D@BB;)8BDFG8=;4.=47=A############################### +@D7DHSVN1:151:D12V0ACXX:8:1101:21318:2062 1:N:0:CGATGT +GTGTTTTCCTTACATTGTCAGGAGTAAAACTATTGTTTTGCGGAGGAACACTTGTGGCTTTCCTGGCAGAAAGTCGCAATGTCATACAAGCATAGAAATCG ++ +@@@FFFDDDHDFDHGE>E>FGGGIEGGGHGII@G4?CGGF9@0?:(0=(.8BF)87CDEGG>7)7ABC=?@(;@A########################## +@D7DHSVN1:151:D12V0ACXX:8:1101:21283:2071 1:N:0:CGATGT +TTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT ++ +@B@FFFFFHHHHGJIIGIHIIHJGJJJJJJJJJIIIIJFIJJJJJJIDEGHHHCAHGHFCEFC=BDDBDDC?BBDDBDD9CDDD@AC<>:4@> +@D7DHSVN1:151:D12V0ACXX:8:1101:21330:2113 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTTTGCTTTTAACAAAAGTGAGATATTTTATTGTACCGAGAACAGG ++ +??7A==@B1@C3?C@C+CF@F@DEEII99CC*:?9B?68?DD@AEE@H?E:;?@CFECECC>@CDCDCD'88/9(>44>B::>:(290234>AA##### +@D7DHSVN1:151:D12V0ACXX:8:1101:21383:2211 1:N:0:CGNTGT +CTAGGAGTATAATAACCATAACACAAACCATAATTTAAGATGTGCCACAATTTGCACAAGTTCTATGTACATTGCAATAAGAAAGAACCAATCGAAACATC ++ +@@?DD8DBFDFDDA@@E;;=)7)7?);(.;>=5>;??## +@D7DHSVN1:151:D12V0ACXX:8:1101:21345:2221 1:N:0:CGATGT +TCCAGCAAGAAGCAGAAGGTATTGAACATGTCGACCAAGTAGAAATATAGCATAATATCGATCATTCAATCTTTGGACGGCTACAATATGATCTCCTCTTG ++ +@@@DDFFFHHHBHIJIJJDCEHIEGIGIIIIHHHIHIIJIJIGEHCG>>DGGIIGGFFF=CHFBHJDA@EE>EFHF<@E<>@=5;@C@A>>C:AC>:?### +@D7DHSVN1:151:D12V0ACXX:8:1101:21377:2241 1:N:0:CGNTGT +AGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGTTGACGGCAACGTTAGGGAGTCCGGAGATGTCGGCGGGGGGCTAGGGGAGAGTTATATTTTC ++ +CCCFFFFFHHHAHHIJJJFHHGIJIJJJJJFGHHHJHIIBEE?3@B;8>0>C::(009BBBB###################### +@D7DHSVN1:151:D12V0ACXX:8:1101:1376:2265 1:N:0:CGATGT +GGAATGTAGCATGCTCATCGGGTCCTGCACAATATTTGCAACCAACGGCTTTGCAGTCCGCGTCAAATAAGCATCGGACTATGGTTTCAGGGCATGTTATA ++ +CCCFFFFFHHHHHJJJJJJJJJFHGIJJJJJIJJJJJJIIJIJIJIJJIIJIJIJJHIIJHHFDDDEDDDDDDDD?BBBDDDDDACDDDDDDCDDDCEEEE +@D7DHSVN1:151:D12V0ACXX:8:1101:1418:2308 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAACAAGATAAGTGAATGCGCTTTGCGA ++ +@@@FBDFBFHDHFIJIGHFGHIIJHIIIIHG?DGHGFGH9DGDHGGBFGHHIJABGHEHA7=BD;;7@A@############################### +@D7DHSVN1:151:D12V0ACXX:8:1101:1340:2313 1:N:0:NGATGT +CTTGAACCGATGNCCACTTAGAACATATTCCACANTGGCAGGAAGCCTCCTACTACGTTGCAAAAATGGCAAAAAGTCTTTCGTCTTCTTTGCTGATGCTG ++ +@@CFFFFFHHGG#2AEHHHIIJJIJJIHIIIGHI#0:DG?BE;FG;@FGHGEHIJJICHHHBBDCFEEE@ECDDD>@CADD>BBBBDCDDDA>CCACDCCC +@D7DHSVN1:151:D12V0ACXX:8:1101:1416:2391 1:N:0:CGATGT +CTAGGAGAAACAACTCCGGTTGAAAGGAGAAACATGGAAGGCCTGATAATCGAGCAGTATTTCGCCTCTCTGAAACTTCTATTTTGTGGTCCTAAACCTAA ++ +CCCFFFFFHHHHHGIGHHIHGIJJFIJIJJJGIIIJJIJIIIJJJIGEIIGHHGIJJCGHHHEHHFFBEEEDACDCCDDDDEDEEDDDDDDCCCDDDDDC> +@D7DHSVN1:151:D12V0ACXX:8:1101:1465:2404 1:N:0:CGATGT +CTTTGCAACCGCTCCTCGAACAGCTTCACCCAACTTAACCGCCTTTTTCCTCATCTCGAACCCTTCATCTGACATCATCAATGTCCTCACCGCATTCTCTA ++ +CCCFFFFFHHHHHJJJJJIIIGIIJJJIJJJJJJJJJJJIIJJJJJJJJIJJHHHHHFEFFCDEDDDEDDDDDCDCDDDDCDDCDDDDDDBDDDDDDEDD@ +@D7DHSVN1:151:D12V0ACXX:8:1101:1722:2250 1:N:0:CGAGGT +GTCGTCAGCCAACGTGAGAGTGTCAAAAACGATAAACCAACCATCAGCATGAGCCTGTCGCATTGCATTCATCAAACGCTGAATAGCAAAGCCTCTACGCG ++ +@@@DD;BABFFFFB2CCE4AAB@C;A@;;>59/(38AB;@AB>?AB8>9@AAB>9 +@D7DHSVN1:151:D12V0ACXX:8:1101:1618:2272 1:N:0:CGATGT +CTCATCACCAGCAGGCCATTTACACAACCTAACAATCCCACACTTTATTGAATTCCAAATTTGCCCTTCCCTCTCTTTCTTCCTAATTTCTCTCTCTTCAA ++ +CCCFFFFFHHHGHJJJJIJJIIJJJJJJJJJGJJJJJJJGJJIJJJJJJJIJJJJJJJIJIIIJDIIJJIGGGFHCFFDFFFEEEACEECDADDDDDD@>@ +@D7DHSVN1:151:D12V0ACXX:8:1101:1610:2301 1:N:0:CGATGT +GACTTTTTACCTTATTAGCAATGGTTTATGAAACAAATCCATTTCGATTAAGCAAAGTCTATTATACCAAAACGCAGCCTCTTCACAGGTGCTTAAGCCTT ++ +?==DBDDAA:C4A@29CFEAFFFFF?DCD@GFF*9B9D89/?DFFA@FG@FAFFA@8BA=B?>DCACDCBB?(5>>>55:ABB> +@D7DHSVN1:151:D12V0ACXX:8:1101:1646:2427 1:N:0:CGATGT +CAAAAAATGGGGCTGTGCCCCGCCTCCGACTCACGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGAAGCTCCCACTTATGCTACA ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJGHHJIJIIEGHGDHHHHHHFFEFFEDDEECDDCCD>ACDECDDDDDCDDDBD@BBDDDDDDDDDDDDEDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:1624:2439 1:N:0:CGATGT +CCACCATTGACGGATAGATTCAAGTATTTGAGCTCGGTGAGGTCTTTGAGGTCTGATGGAATGGTGAACTGACGAGTACTGGATCCAGCAGGGTCTAGTCG ++ +CCCFFFFFHHHHHGIIJJJJJJJJIIIJIJGIJJJJJBGFGHBGHIIIGIJBDHIHJJJGICHJ>DECHHGGFFF>=ACDCDCDCDDDCDDDD5>?CDEDB +@D7DHSVN1:151:D12V0ACXX:8:1101:1880:2270 1:N:0:CGATGT +GCTTCTTCTACTGTTCCCCAATCAGTGCTGTAAACTAGTAAATATCCTTAAAATTAAACTGTAACTCTGATATCATCACAAATTCAAAACAGCAACGTCTA ++ +CCCFFFFFHHHHHFHGIGGHDHGGEIEHHI?FHIJJJJIGIJGGHIH@GCBGHIGIIJJGEHCEGIGIIJJDGJJIJJGHIJJGGDCHHGFFFFFDDDDDB +@D7DHSVN1:151:D12V0ACXX:8:1101:1755:2270 1:N:0:CGATGT +CTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAATCGACTGTTCGACGCCCGGGGAAGGCCCCAAAAGGAGCCGTTCCCAGTCCG ++ +CCCFFFFFHGHHHJJJJJJIHIIIIJJJJJIJJJIIJIIHJJJIGGIJIJJGIIIJJJJIIG=EDFDCDDD?BDDBDBDDBBAA@BAB@BBDDDDDCACC? +@D7DHSVN1:151:D12V0ACXX:8:1101:1877:2290 1:N:0:CGATGT +CCTTCTTGTGATATAGTTGCCGGATTCCAACAATTTGGAGTTATACTCTGCAAAAAACCAATCATAATTCTTTGAAAGAAATTCAGAAACCGTGGATTTGT ++ +@CCFFFFFHHHHGJJJIJJJJJJJJJIJGJJJJIIJIJGGGHGICHIIJJJJJIJJJIJJJGJHHFHHFHFFFFD@ACEEDACCDDCDDDDD@BDBCDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:1838:2296 1:N:0:CGATGT +AAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTA ++ +CCCFFFFFHHHGHJIGIJHIIIIGI@HCFGEHIIFBHIJIIFHIIGIIJJFGEHIICH@AA@EHHHF;BAEC@BB;@B=??>C@@CC@CCAAA9B<@DDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:1926:2308 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAACGTCACTGGTTACCATCCACCACACTCCC ++ +@B@FFFFFHGAFDHIIJIJJJJIIIJJJJIFHHGIIDHGIEFDGE@FFH@AFBHGECAC>>E@;(7@@A################################ +@D7DHSVN1:151:D12V0ACXX:8:1101:1832:2325 1:N:0:CGATGT +GTCATTAACAATACCTAAATCACTACTCTCTTCGTTCGATTCAAGCTCTTCCGACTCCGATTGACACCTCGCCACTTGAAGAAAGGGAGAAGCGAGAAGGA ++ +CCCFFFFFHHHHHJJJJJJJIJJJJJJJJJJJJJIJJJIJJJIJJJJJJJHIJEIJJJJJJJJJJJHGHHFFDDDCDDDDDDDDDDDDDDDDDDDDBDCD? +@D7DHSVN1:151:D12V0ACXX:8:1101:1920:2377 1:N:0:CGATGT +TTCACATTCCTCACTCTCTTCTCTCTCAGTCTTAAGCTTACATTATGGGTAAGGAAAAGGTTCACATTAACATTGTGGTCATTGGTCATGTCGACTCTGGG ++ +@CBFFFFFFFFHHJIGIIIIGGIGJIJJEHIGGIIIDHIIIHEHIIIEEB?FHDIIHIIIBFHHJJIHGGJICHIJIIGHHHHEHEDFFFDDBCDDDDCCD +@D7DHSVN1:151:D12V0ACXX:8:1101:1952:2406 1:N:0:CGATGT +CTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGCTTAGGGCTGCATTCCCAAACAACCCGACTCGGCGA ++ +CCCFFFFFGHHHHJJHGIIIJ@FHIGJJJIJIJJJEHIJJGGEHIGHEEHFE>BDEECCA@BDDBDDDDDDDCBB@CDDCDCCCDBDDBB>>D>B>@@@>> +@D7DHSVN1:151:D12V0ACXX:8:1101:1825:2463 1:N:0:CGATGT +CTCTGATACAAGTCATCTACAGTCATTTTCCTTGAGTGAAGGCATTCCTACTAGGTTTCTTTTGACTTCTCTCATGTGAAACAGCAGGCATCTTTGATATC ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJIIJJJIJHIJJJJJJJJJJJIJJIJJHIJJIJJJJGIIJJIJJJIJHIJIJGJJHHHHFFFFEEEEECEEEC +@D7DHSVN1:151:D12V0ACXX:8:1101:1970:2464 1:N:0:CGATGT +CTGGAATTCACAGTTAACCTGTGAACTGGGAAACTCTTAGCAGAGTCATCCACAAGGCTGATGATACACATTTTAAGACCCAGATAAGGCTTTTGCTACAT ++ +CCCFFFFFHHHHHIJJJJJJJIJJJJJJJJJJJJJJJJJJJJJJJHIJJJIJJIIJIJJJJJJJIGHIJJIJJJIGHGHHHFFFFFEEEEECDDDDCDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:2008:2273 1:N:0:CGATGT +CCGATCAATATTATCAGTAGCCCTCCGAATCGCATGAGTCCGTATCTGGGTGGGGCGCATAGCAGTTTCAAGAGCAGAAAGACGGTGATCAAAAGACCCCA ++ +@@@DDFFDHFFFFIIIEIGG9AFHGIGICEGGIGIIIIIIIIDHHHIIII=FEHHHD?=BBC>>AA@C@CCD@?CDCCDCCDDBD0??@D@CA>A?3@DEEBB############################### +@D7DHSVN1:151:D12V0ACXX:8:1101:2218:2416 1:N:0:CGATGT +CTAGAGTGGGCCCAGCATATGCTGGTAGGCCCCACCCGTAATCCAAGTACTCAAGAGTACATCCACCTCTAGTTATATCCGATACTATAAAGTTTCGGGTC ++ +BCCFFFDFHHGHHJJJJJJJJJJJJHIJJIJJJJJJJIHIJJJJJJJHIJJJGIJJJEGIJJHHHHHFFFFFEEECEEDEDDDDDDDEDDEDBCCDBDDA> +@D7DHSVN1:151:D12V0ACXX:8:1101:2109:2446 1:N:0:CGATGT +CTTCAATTGAAAACCATGACTTCCAATCTTCTTCTTCATAGATGATCACATGTTTGAGCTTCGAAACGATCCGAGAGCCTTAACAACAGTTGCTCGTAGCA ++ +CCCFFFFFHHHHHJJJJJIJJJJJJJJJJJJJJIJJJJJIJJJJJIJJJJJJJJJJHIJJJJJJJJJJJJJJHHHFFDEEDEDDDDDDDCDDDDDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:2035:2476 1:N:0:CGATGT +CCGTCACCCGTCACCACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCGCAAAGGCCGTGCGATCC ++ +CCCFFFFFHHHHHJJJJJJJJJIIJJIJJJJGIIJJJJJJJJJIIJJFHIIIJJJJJIJJIIHHHHHGHFFFFFDDDDDDDDDDDBDDCDBDDDDDDBDD< +@D7DHSVN1:151:D12V0ACXX:8:1101:2266:2251 1:N:0:CGATGT +TACAAAACCATCCTAGATAGCTCGTCCGAATGCAGTTCCGTCACCTGCACTTCTAACCGGTAACCTGAAGTGAAGATGTGTACAAGCCAAATCCAGCAGCT ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJIJJJJIJJJJJJJJJJJJJJJJJJJJJIJJHHFFFFFCCEEEEECCDDCDDDEEDDDDDDDDDDDCDDBBD +@D7DHSVN1:151:D12V0ACXX:8:1101:2330:2272 1:N:0:CGATGT +ACAGCATTCAATTGAGAGGATACATTAAATAGGCTTTATTAGTATTTGTAACCCTTTTCGAACAAGCTCTCAGAAGCTGCACTGATAGCAGGAGTTGCACC ++ +@C@DFFFFHHHGHHIJJJIJIJIIJJJJIIJGGIIJJIIJIGCGHGJJIJGIGHJJJJJJFIIGGJJIIJIJIJGHHHHHFFFFFEDEDEEBBBACDCDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:2332:2309 1:N:0:CGATGT +GTAACAGATTGCTGATAAAGCACACCACCAGCAATAGTAAGGAGAAGACAGACCAACCCAATAGGACTAGCATGTTTATCCCAAATAAACACATTAATAAC ++ +CBCFFFFFHHHHHJJJJJJJIJJJJJJJJJIIIJJJJGIJJJIJIJJJJJJJJJJJJJJJJJJJJJHHHHHFFFFDFDEEEEEDDDDDDDDDDDDDDEEDD +@D7DHSVN1:151:D12V0ACXX:8:1101:2278:2356 1:N:0:CGATGT +CGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGCTTGGGGCTGCATTCCCAAACAACCCGACTCGGCGACA ++ +CCCFFFDFHHHHHJJJJJJJJJJJJJJJJJJJJFIJJJJJJJIJJJJJJJFHHFFFFFDDDDDBBDDDDDDDDDCCDDDDDDDDDB8?BD@B9@?BDD9B3 +@D7DHSVN1:151:D12V0ACXX:8:1101:2290:2383 1:N:0:CGATGT +GTGGAAACAACGCTGAAAGTTTCAACATTGAAACCTACGCTCAGAGAATGAAAGAGGATGATGAAAAGCGGCGCTTGTTCTGGGAAAAAGGACCCGATGTA ++ +CBBFFFFFHHHHHJJJJJJHJJJJJJJJJJJJJJJIHHIIJJJJJJJJJJJJJJJJJJJJJJJHHHHHEFFDDDDBDBDDEDDDBDDDDDDDBBBDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:2326:2404 1:N:0:CGATGT +GTTTCTGTAGAAGTTTATCCTCTTGTAATCTTGTAGGCCTTGTGGAAGTGTGACATTTCCTGGATCATCCATCCCTGTAATTCACATTTGAATTTATTACA ++ +CBCFFFFFHHHHHIIJJJJJJJJJJHIJJIJJIIJJJJJJJJIIJJJJHIHGIJJJJJIJJJJJIJJJJJIJJJJHIIJJJJHHHHHHH;BCDFFFEEDEE +@D7DHSVN1:151:D12V0ACXX:8:1101:2416:2417 1:N:0:CGATGT +GGGATTTCAAAATAGAAACTTCACAAACACGGTACCTACCTCCATATAGGTCGTAGTCATATATATGTTGCAGAGATTAGGACTTGCAAAATGCACGTAGT ++ +@@@FFFFFFHHHHJJJJJIIHIJIIJJJIIJGGIGJIJJJJJIIIIJJJJJIJJJJHIGIJJJIJJJHHIJHHEHHFFFFFFDEEEDEDDDDDDCDDACD8 +@D7DHSVN1:151:D12V0ACXX:8:1101:2378:2439 1:N:0:CGATGT +ATACAAACATAGTTTCAAGGAGATAGGTGAGAGATCAAACTCACTCAACTCCCACCAAAGCCAACCTCTGAAACCTCCATATCCGAACGGTTTAAGTTGGA ++ +CCCFFFFFHHHHHIJJJJJJHIIJJJJFHIIGJJJJJJIJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJHHHHHFFFFFEEEEDDDDDDBBDDDDDDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:2453:2476 1:N:0:CGATGT +GCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGA ++ +CCCFFFFFHHHHHJJJJJJJJJJHIJJIJJIIJIIIBFGGHIGGHAHIJJIIHHHHHDFEDCBBDCCBDDDCDCCCCCCDDD58>B<:@@>@C>C(>A### +@D7DHSVN1:151:D12V0ACXX:8:1101:2477:2484 1:N:0:CGATGT +CTAACGTTGCCGTCAACCGCCACGTCCCAGTTCAGGAATTTTAACCCGATTCCCTTTCGATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTC ++ +CCCFFFFFHHHHHJJJIJJJJJJJJJJJIJIIJJJJJIJJJJIJHIJJIHHHHHFFFFFDEEDDDDDDDDDDDDDBB@DDDDDBDDDDB7ACCCDD@AD@>@9?B# +@D7DHSVN1:151:D12V0ACXX:8:1101:2515:2434 1:N:0:CGATGT +TCAGAACTTGAACTTGCCGCCGATGTAAATGCGGCGCGAGCCGGTTTCGTAGCGGAACGGCAATTCGGGGAATTGCAGATAGGCCGACTGATCCGACTGAG ++ +C@@FDFFFHHFFHJJHIGIIJJJGIGGIJCIBHIJIGHHFBCBD8@DCBDDBBBDDDDDDDDDCDD?DDDBD@DCCDD@CCCCDABB>BBCACCBBD>BCD +@D7DHSVN1:151:D12V0ACXX:8:1101:2532:2435 1:N:0:CGATGT +CTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTA ++ +@CCFFFFFHHHHHJIIJIJJGIJIEHIIIIJGJDHHGGHIIGGHIJIHFGHIJJJJJJJIIIJHHFBCA@DDDDEEDDDDDDDB@BDDDDDEDDCCCDDCC +@D7DHSVN1:151:D12V0ACXX:8:1101:2563:2450 1:N:0:CGATGT +CCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGA ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJGIHJJJJJIJJJJJJJJJJJJJJJJHHHHHHHFFFFFFFEEDEEDDDDDDEFEFFEDDDDBBDDDDDDDDCDDC> +@D7DHSVN1:151:D12V0ACXX:8:1101:2822:2327 1:N:0:CGATGT +TCTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGATGCTCGCGCAGTCGCACTATCGGACGGGC ++ +CCCFFFFFHHHHHGIJIIHIHJJIHJGIIGGIJJJJCGIJIH:BDFFE9@EECEEDDCD@BB?CDCCDDDBDEDDCDDDCDDCDD>BCCCCCCC3 +@D7DHSVN1:151:D12V0ACXX:8:1101:2997:2373 1:N:0:CGATGT +CCGACGGCCGGGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTT ++ +@@??DDADAHHH:?GHGIDHGIGIIGIIIGIEIHFEEEEECDCDE8>>=@BA:ACABCCA>>9FBHA>CC;A=@BBBBB5?CCCCBBB<(+:@C4: +@D7DHSVN1:151:D12V0ACXX:8:1101:3193:2270 1:N:0:CGATGT +CGTGGCTTTGACCAGTTTATGAATCTGGTGATCGACAACACTGTAGAAGTAAGCGGCAATGATAAAACAGATATCGGCATGGTGGTAATTAGAGGAAACAG ++ +CCBFFFFFHHHHHJJHIJIJJJJJJJJJHGIJJJJJJJJJIJJJJJJJJHJJJJJJJJJHHHHHHFFFFFEEEEEDDDDDDD>CD2@CCDCCDDBBBDCCC +@D7DHSVN1:151:D12V0ACXX:8:1101:3037:2281 1:N:0:CGATGT +CATCCGAGTAGCAAGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTA ++ +CCCFFFFFFHHHHJJJIJJJJJJJJJJJJJJJJJJJJJJJJJJJJIJJJJJJJJJJJJIJJJJJJJIJJJJIJHHHHFHFFFFFFFEEEEEEDDEDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:3118:2325 1:N:0:CGATGT +CCAAAGTACACAAACTTGAATTTACATCACCCATTTTTTTCCGATCTCCCAAACACAACACTAGAAGAACAACTCATTAAGAAACCACTTGTCGAAAAAGC ++ +@C@FFFEDFHHHHHIIJJJJJGIIIJIIFIGF?GIIJIJJ9FFGIIBHGHEHIIIJIHHCHFBDDDECCEEEDDDC@DAC@CCDDAB:AB833::@## +@D7DHSVN1:151:D12V0ACXX:8:1101:3217:2390 1:N:0:CGATGT +TCCAGAAGAATATTTCAAAACACGAAGGAAAGCTTTTGTCCGTTGAGTCTTCTGTTTTGTGCAAATAGCGAGAACCCTAGGTTTAGCCATTTGTTTGCCAA ++ +CCCFFFFEHHHHHJJJJJJJJJJJJJJIJJJIIJJJJIHIIIFIJJJGIIJIIIHJJJIHGFHEHIIIJHGFFDEDCBDDCACCCCDDDDDEDCCDCCDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:3113:2415 1:N:0:CGATGT +CAAGACGATTCAGTTTACGCTTCGACATCACTGTGTTTGTAACATTCAACCGTGAGTACTCCCAAACATAAGGCATGTACAAGTCAAGCGCGTGAAGCAAC ++ +CCCFFFFFHHHHHJJJJJJJJJJJIJJJJIIJJJIJJJIHIIIGJJJJJJJIGGIJEHJJJJHHHHFFFFFBEEEEEDDEFDDCDEDDDDDDBDDDDCDDB +@D7DHSVN1:151:D12V0ACXX:8:1101:3006:2420 1:N:0:CGATGT +GAAAGACGCATGAGACATTCGCCTTTAGACTCATCCGAGGTTCCTTTGTTAGCTTCAGCAACTTCACGCTCAAAACCAACGATGATGTCACGGTCGCACCA ++ +??@FFFFFAAHHHIIIGHIIEGGDGHIGIIGIEGGIAD@FDDHGHGIGHIIB9@D@EGFIHHHHGE??BDCACDDBDD@BBBBBCDDC:>ABD@?=;>??5<18=???AA##################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:3193:2429 1:N:0:CGATGT +GTCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCTTGCGGATGTTAACGCAATGTGAT ++ +CBCFFFFFHHHHHJJJJJJJJJJJEHJJJGHIIJIJJGIIJJJJJIJHIIIGHHHHHHFFFFECCCEEDDDD@BCCDDDDDDDDDDCCEEDBDDDDCDEEE +@D7DHSVN1:151:D12V0ACXX:8:1101:3246:2435 1:N:0:CGATGT +TCATCTTGATCATCTCTACCCCTAGAACGCCTATCACGATCATCATACCTACTTCCATGCCTTCCATCATGCCTAGTCTTGTCCAAGTCCCTATCTTTGTA ++ +=8?DD;:4CCDFD9AC<GEFFBEFE?B@BFCFE@FCFGF@F@FFFIGCFE4@EFFFCFFDDDEDDCCC@@CBBBBBBBBDABBA +@D7DHSVN1:151:D12V0ACXX:8:1101:3191:2487 1:N:0:CGATGT +CTTGTTGTCGGGATCATTAGGGGCAAGGAAACGATTGCCTTGGCTGTTAATGGTAGGTTGTGCACTTCCTCCAATAGCATACATTTCCCAATGTGTATAGT ++ +@CCDFFDDHFHGHJJEGIJJIJJIIJJJJJJIIGFHEGGIIDEEGHFH@FGIGJIEHCEFHDDFFFFEEECCEDD;@CCECCCDDDEECCC<5:4>@CCC: +@D7DHSVN1:151:D12V0ACXX:8:1101:3290:2253 1:N:0:CGATGT +CTAGGATGTGGACTAGGGTTCGGGTAATTGGGCTGAGCATATGGACCAGGATACTGATATTCAGGCTGCAGATACGGGTATGGATGTGATTCAGGATATGG ++ +B@CFFFFFHHHGHJJJJIGHJJJJFGIJJJJJIIJJJJJIJJJJJIJIJJIJIJJIIJJJJIJJJHHHGHFFFFFDDD;>CDDDDDCCCCDDDDDDDDCDC +@D7DHSVN1:151:D12V0ACXX:8:1101:3302:2341 1:N:0:CGATGT +TCCTGCGACTGTGTTGCTGCTCTCCATTGACCTCTTCTTTCAGAAAATATCTTGTTATGCGCAGCAGAGCCTCCATACTGATGAGCAAGGGTGTCTCCCAT ++ +@@CDDBDDFDHDHHIIJJGHBHGIHIGD>EGGCGEHIGDGH@D>GHIJEGDGEDED@EEHG@FGGFCEEBE;BDA@CCCCD>ACCCDDC@D9??CCCCC9@ +@D7DHSVN1:151:D12V0ACXX:8:1101:3312:2355 1:N:0:CGATGT +TAACAAGTTAGGGTTTTTCCCCAAGAAATGACCCCACCATCTCAATATTAAGATGTGGTAGTGAAATGCATCTTCTTCATCCCCATCTGAGAATGGCCGAA ++ +@@@DDDFFBHHHGGIIIJGJGHGIGGGGG@FHEHGIJFCHIHJGIIJJHEIAFCHIIGCFHCFGAH@7@ECC?CCAHFFFB;BCD>C@@CDDDDA@BC=:; +@D7DHSVN1:151:D12V0ACXX:8:1101:3481:2418 1:N:0:CGATGT +CTCCATTTCAACACAGTAACTACTTCAATTACCAAAGTAATAATCAAATCACACTTTTAATGTCTTTTTCTAGTAAGATCAGATCAAAAATACACCACCAA ++ +@<@DD:ADDFBBF?EBAF>FHCBHG@EEEB7@A3?AB=@ +@D7DHSVN1:151:D12V0ACXX:8:1101:3387:2436 1:N:0:CGATGT +CGGCCGGTGCCCTTGGCGGGTTTAATGCGCACGCCGATGGGGATGAACATTGTTTCTAAAGGCGGCCAAAATGTGCTGGAATTTCTCGAAAACGATTTCCC ++ +??>@-;>A>CCC???@/-5??A>?>CB;B@@A>??@?ACCCC<3>?C@CACCCB@###### +@D7DHSVN1:151:D12V0ACXX:8:1101:3743:2251 1:N:0:CGATGT +CTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTT ++ +CCCFFFFFHHHHHFHIJJJJJJIJJJJIIJIJIJJJJJJJJJJIJJJJJJJJHHHHHHFFFFFFFFEEEEDDDDDDDDDDDDDDCCDDDDDDDDCDDDCEC +@D7DHSVN1:151:D12V0ACXX:8:1101:3619:2252 1:N:0:CGATGT +CTGAGAAGTAGTCTAGTCTGATGTGATATTGAAGCGGTTTTTTAGTTTTATTTAGTTTCTTCAGGCTTGTCATATTGCTTCTCTTAGTTTAACGCTTCAGC ++ +BCCFFFFFFHHHHHIJHHJJGJJGHGIJIJFJJJJJJGHIJJJFIFHIJJIJJJJGJIJJJJJHGIIGIFCEHFE@CFFFFFEEEDECECCC>?BDDB@CC +@D7DHSVN1:151:D12V0ACXX:8:1101:3659:2297 1:N:0:CGATGT +ATTTGAATATCCCTGAGAGAAGGTCGAGAGGGATGAGGTGGAGTTTGTGAAGAAGCCCAAGGAGGCGTGTTTTTGTCTCCATCCGCAAGTTGCAAAGAAGG ++ +CCCFFFFFHHHHHJJJJJJJJJJGHJGIGHIJDHIIJJ?FHBHFGIJIIIIJJJIJJJJJJHHHFFD;B3;ACB/9(55@(:AB-85554>:44>C3>A9? +@D7DHSVN1:151:D12V0ACXX:8:1101:3638:2340 1:N:0:CGATGT +GTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTC ++ +@?@BDFDDHGHHHHIGGIBFEBG@ECC@>AC@C;?AA59:(>;>CC<@B3?>@>AA +@D7DHSVN1:151:D12V0ACXX:8:1101:3509:2355 1:N:0:CGATGT +CAACTTTTTATTAAATGCTCCTATTCATTATAAGGCGGGTTACAAGTCTCTTGTTTCCGTCTTCCATCTGTTGCTTCGCTAGTGCACCTTAGAACAGTCGG ++ +CCCBDEFFHHHHHJJIIIIJJJIJJGHEGGGIIIIIJJJEGHIIJJHIJFFHGHHFFFF>AECCEDDCCCE5;>CACBDDBBCCCCDDCCDCDAAAACC## +@D7DHSVN1:151:D12V0ACXX:8:1101:3587:2403 1:N:0:CGATGT +CGGAGTTCCAACCATGTAGAATGAGTAGAAGTTGATTCCTGCACCAATGCTCGGCCTTGCAGTCCCACGAAGAACACCACAACCGGTTGTTTGTGGGCAAT ++ +CCCFFDFFHHHHHJJJJJJJJJJJJHIHIJJGIIIJIJJJJJJJJJJJIJJJJJJJJJJJJJJJIJJJJGHFEEFCEDDDDBDDDD=@BDDDDDDDDDCDD +@D7DHSVN1:151:D12V0ACXX:8:1101:3750:2409 1:N:0:CGATGT +CGCTCTTTTATTGAAATAGATAAATAAACATAAATATTTAATTAGACACATTTAGCAGGTTCCCATGACCATGCAGCACACATTTTGCTACAACATTCTTT ++ +CCCFFFFFHHHHHJJJJJJJJJJJIJJIJJJJJJJJJJJIJJJJJJJJJJJJJJJJJJJHIJJJJIJJJJJJJJJIJJJJHHHHGFFFFFFCCEDEEDEEC +@D7DHSVN1:151:D12V0ACXX:8:1101:3709:2445 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAATCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAATTGTGCTTAACCTGTTATCTTGTCTTTATT ++ +@@@DDFDDHFHGHGGEHIGGHEGGGIIGGCFHGGGGIIBD4BBF>;CHBGG8-;;DCEEE>?####################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:3670:2460 1:N:0:CGATGT +AGCCAGTCAAGTCCCTCGTACAAACCTTCACCAGATGTAGCACAAGTGCTTTGGATATACCAATGGCGCTGACGAAGGGAGTGGAGACCAAGCTTATCAGT ++ +CCCFFFDEHHHHHJIGIIHIJIJIJJJJJIJGIIIJJGHIIIJJJGDGHGIJJIIJJJGIFGIGEGIJHHFFFDCABDDBD8?BDDABBDDDDDCDDDDD> +@D7DHSVN1:151:D12V0ACXX:8:1101:3748:2479 1:N:0:CGATGT +GTCCTTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTT ++ +CBBFFFFFGHHHHJJJJJJJJIJJJJJIJJJIIJJIJJJJIIJJHIJJIJIIHHHFHHFFFFFFFECCEEEDDDDCDDFDEFFEDDDDD@BD?CC?@BCAC +@D7DHSVN1:151:D12V0ACXX:8:1101:3844:2256 1:N:0:CGATGT +CCGAGACATCTAAAGAAGTTGAATTAAGATTGACACCGGCACTTGATATGACTAGAGTGAGGGATAAGAAGGACAGAGGGACTGTAACACTCAAGGTGTTT ++ +CCCFFFFFHHGGGIFHIIHIIIJJIJIGGIIIJJIJJJJIEIIIIJIJIJIJJJJJJFGGIJJEHGFFFFFEDEECEDBDBBDDDECDDDDDDDDDAC>BD +@D7DHSVN1:151:D12V0ACXX:8:1101:3827:2266 1:N:0:CGATGT +GACCCGACTCGGCGACAGGTGGCCTAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCG ++ +@@@DADDFHHAB=EFHIIIHIIIIIICDGHHDGIGE=8=CG@@E>EGIEHE9=?@CFFCCBBB55:<:ACAA@BBB?C::ACACDCCBDD +@D7DHSVN1:151:D12V0ACXX:8:1101:3843:2338 1:N:0:CGATGT +TTGAAAGTGTTCCCAAAGGAGATGCTATCTTCATGAAGTGGATCCTACATGACTGGAGCGACGATCATTGCCTGACATTGTTGAAGAACTGCTACAAGGCC ++ +BCCFFFFEHHHHHJJJJJJJJIIJJJJJJJJJJJIJJJFHIEEIJJJJJJJIJJJJIJIJJJIGHHFFFFFFEEDEEDDDEDDCCDCDCDDDDDDDDCDBB +@D7DHSVN1:151:D12V0ACXX:8:1101:3904:2388 1:N:0:CGATGT +AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAAGAACCAACAAAACAACAGGGA ++ +CCCFFFFFHHHHHIJJJJIJJJJJJJJJJJJJIIJJIIJFIIJJJJHIIIJJJIIHFGHHGGF>;BEFDD############################### +@D7DHSVN1:151:D12V0ACXX:8:1101:3949:2430 1:N:0:CGATGT +TGGTAGTAGCCGCTCTGGTTGGAAGTCCGGTGACTGGATTTGCACTAGGTCGGGATGCAACGAGCACAACTTCGCAAACAGGATGGAGTGCTTTAGATGCA ++ +??@1B??A==CDFHEG@>CH@FE>BFH?D80?FEHGG>FDFGE?CB:A@>:@CCCCCCA +@D7DHSVN1:151:D12V0ACXX:8:1101:3993:2446 1:N:0:CGATGT +CTCTGCCTGTTCTCCATTAAATAAACACGACCGAGAATTACTCAAATCGGTCAAAAATCGAGTAATCGGGAACGGAACTCGAAGACGACGACGATGAAGTC ++ +@@@FFFFFDHHDHJJJJJGGEHIJJJGGE@FHHGI>FGIJIIJJJIJIJIFGIJFEHEEBEF;>CCCDDDDD?BDD?BCDB@985?<9>B@9<@DDDCC44 +@D7DHSVN1:151:D12V0ACXX:8:1101:3954:2451 1:N:0:CGATGT +CCGAGACATGGAATGTTCAGTTATTTAGATCCATTGATGGTGGTGCTGCTTTTGATTTTCCCGATACTCCTGAAAAAGCGGCCGAAGCTGGGCTTGTCAGT ++ +CCCFFFFFHHHHHJJJJJJJGIIJJJJIJJJJIJIJGIGIIIJDHIJJGIJJIJJJIJJIIIIGIJJJHHHGHDFFFCEDDDDDBBDDDDDDCDDDDCCD: +@D7DHSVN1:151:D12V0ACXX:8:1101:4202:2276 1:N:0:CGATGT +CTGGGTACTTGACATCGAAGATGCTTCTTGACAACCCCGATGCTGCATCTTCACTGGCGTGGGATGAGGACCATGAACTGCTTGAGAAGTGTGTTTGCGCA ++ +BBCFFBDFHHHHHJIJIJIJHJIJJJIIJGGIJIIJJJIIGHJJJJJJGJJJIJIJJJJGHHFBDD@AC>A=AACCCCDDCCDCA>@ +@D7DHSVN1:151:D12V0ACXX:8:1101:4238:2303 1:N:0:CGATGT +CTTTCCTTGACTCGTTCCAGAACTAAGAGTGACATTAGTAATAGGTTTGGTAGTTAGAATAGGAGTAGAATCACCATCCAAGATTCTTTGAATATAAGGAT ++ +CCCFFFFFHHHGHJJJJJIJJJJJJJIJJHIGGIIJJJHIJIJJJFGIHJBFHHIHIHHIIIJGIGIIJGHHGIIGGHHHGHFFFFFFE@ACEDEEDCACC +@D7DHSVN1:151:D12V0ACXX:8:1101:4129:2322 1:N:0:CGATGT +GGGGATTTGAATTTTTGGATTTTGAATTTTTGATCGTTGATGGTCTTTTTTTTTTTTTTTTTTTTGGGGAAGAAGAGAAAAAATAAAAAGGGGGAGATTTT ++ +BCCFDFFFHHHHHJJJJJHIIJJJIGGJJJJJHGIJHIIGIIIDHIJJIJJJJHFDDD########################################### +@D7DHSVN1:151:D12V0ACXX:8:1101:4224:2335 1:N:0:CGATGT +TTTCCCTGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJGIHIJGIIIIJJIIEIIJHIJJIIIIEAHFFEFFDDEDEDDDDDDDDDDDDEFEECC>@DDBD?B?ABACADDCDBDDCCBCCC@CCBCCA@ACDDCC9<>ACCCC: +@D7DHSVN1:151:D12V0ACXX:8:1101:4124:2406 1:N:0:CGATGT +CTCCATATCGATACTAAGCTTTGTTTTTGGCTCCAGCCAAAACCAGCAGTTCAATCATAACCCAGAAATATAGATACATAGCAATATGATCAATCCAACCT ++ +CCCFFFFFHHHHHJJJJJJJJJJIJJJJJJJJJJJJJIGHJJJJJJJIJHIJJJJJJJJJJIJGHHHHHFFFFFFFEEEEEEEDDDDEEEDEDCDDDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:4218:2452 1:N:0:CGATGT +GCGACCAGAAAGACATTTCCGAGTACAATAAAAGTTGTTGCAACAAGTACCTTGACAGAGACTTTTTTGTTCAAAACAAAGTATGCAAATGCGATGTTCGA ++ +CCCFFFFFHHHHHJJJJJJJJJJGIIJJIJJJIJGGJGJJJJJIJJJGIJJJJJIJJJJJJJJIJJJFFFFEEEDEEDDDDCDEEDEDDDDDDDDDDDEB@ +@D7DHSVN1:151:D12V0ACXX:8:1101:4317:2277 1:N:0:CGATGT +ATAAAAGAGCTCCCGCGCCGATTAGTATATAGTACAATGTGAGTGAACATAGCACACTGCCTAAACACCTAAAAAAAGAAAAAAGGAAAAAAAAAAAAAAA ++ +@CCFFFFFHGHHHJJJJJJJIJJJJGIIJJJIFIIJJJJJJJIHGGJJIJJJJJJJHHHHHFFFFFEDDEEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDB +@D7DHSVN1:151:D12V0ACXX:8:1101:4385:2356 1:N:0:CGATGT +GGCATAATTCATCATTAGTAGTCCGTGCTCTCTACAAACATCAGCCAACGTCAATGTACCGGCAACATTGGTTCGGATTGTCTCTGTTTTGTGAGACTCAC ++ +@@@FFFFFHHGHDEIIII,CEIFHIFHIICHEHGGIIIIIIIIIIIIIIGHIGHDIDH>E@FGGHHEHFFFDDECBDD@CCACCCCCAAC(533:@CDDCC +@D7DHSVN1:151:D12V0ACXX:8:1101:4425:2415 1:N:0:CGATGT +GGGGTCGTCAAGGCTGAACCCGGATGTGAGCAACGCAGTCTCAAACAGAAGCAGCACTAAATCCTTTACAGATTTGTCATTCTTGTCGGCATCTGCTCTCT ++ +CCCFDFFFHHHHHJJJJJJJJJJGIJHIIIGIJJJIJJFHIJJJJJJJHHHHHFFFFFEEEEEEDDDDDDDDDDDDEDEEEEEECCDDDDDDDDDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:4454:2421 1:N:0:CGATGT +CTACAATCCAAAGGTTTACATAGCCCAAAGTCCGATAATCTCAAGTGTCCATGTTTATCAAGTAGCAAGTTATCGGGCTTAATATCTCTATGAATATAGTT ++ +CCCFFFFFHHHHHJGHJJJJJJJJJJJJJJIJJJHJJJJJJJIJJGIIIJJJJJJJJJJJJJJIIJJJJIIJJJGHFFDDEEEEEFEDEEDEDEEDEEDEC +@D7DHSVN1:151:D12V0ACXX:8:1101:4349:2434 1:N:0:CGATGT +CGGTCTTGTTCAACGCAATGGCGACTGCAGCGACGAATGCCACCACACAAACAACTGAGACACCTATAATCACACCTTTGTTAGCCATTTTTTTTCCCTTT ++ +CCCDFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJIJJJJJJJHHHHFFFEDEDDDDDDDDDDDDDDDDEDDDDDDDDDDDDDDDDDDDEEDDDDDCDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:4314:2435 1:N:0:CGATGT +CACTTACAATACCCCGTCGCATATTTAAGTCGTCTGCAAAGGATTCAACCCGCCGCTCGGTAGAATTGTGATTCAGAGCGGCCCTCACGGTGCATCCACCG ++ +CCCFFFFFHHHHHJJJIJJJJJJJJJGIIIIJJJJJJJJJJJIJJIJJJIJJJJHFFDDDDDDDDDDDDDDEEEDDDDDDDDDDDDDDBB?BDDDDDDDD< +@D7DHSVN1:151:D12V0ACXX:8:1101:4391:2456 1:N:0:CGATGT +GACGGGCGTGGCTAAGGAGCTCAGCGGAGTAGGCTGGGTTAGAGCGTTGGAAAACGATGGAAGCAGCGGCCATAGCGGCAGCAGTTTCTCCGGCAAGATCT ++ +@@@DDADDHHFFHIIGGGHIGIII>GIBF6=8BBBBBB<<+4:@CAC35<.08?AAC +@D7DHSVN1:151:D12V0ACXX:8:1101:4384:2471 1:N:0:CGATGT +TCCGTCTTTCTTCACCTCTCGATTGGCCAAGCAGAAGAATGTCAAGTAGTTCCTTGGATCCTCTTCAATCCCCTTAGCCTGCAAAGCAGCAATAACATCCT ++ +@@CFDDFFHAFFHJJJJJJJGGIIGICHCHEDGIGEHEGIEGIIIIJIIFIGHIJIJIGGGII@GG;FGIIIHHCCHHFCFFD>CCEC?BBD@CDCCCCDC +@D7DHSVN1:151:D12V0ACXX:8:1101:4526:2273 1:N:0:CGATGT +AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCTGCTTGGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCC ++ +@CCFFFFFHHGHAGIEHJGAGFGIEGIAGEHGHJGIIGIIJIAEE?BBDCECDCCCCCBAC>@@@BB???CDD@BHEDDDBDD8FHHGEB?DGHF@HE9?BGHGGHHEEHIIIGCDHECCAEEHCGGHCHHHCEEEEDDD@=CCCCCDECCCC +@D7DHSVN1:151:D12V0ACXX:8:1101:4622:2358 1:N:0:CGATGT +TGAAGGACTCACACCAATCATGATAAACTCCGATCAAGCCCCGGTCAAAAATCACAGAAAGAGTGTCTGCTTCATGTATCGGAACAATGTTCATGACCCAG ++ +;??DD>DDBFDHHGGHGIGGG@@>>8@BBBBCCA>ACDECC:CBB? +@D7DHSVN1:151:D12V0ACXX:8:1101:4737:2419 1:N:0:CGATGT +CTGAGTAGGAAAGTAACGGATGACATTAGCAGTGTTCCCTCTCCACAAGGACATCATACCTTCATCCTTAATGGTGCTTCCAAAACACTCACCAATGCCCT ++ +?@@DD:AB3D5>?@BBBBB +@D7DHSVN1:151:D12V0ACXX:8:1101:4515:2485 1:N:0:CGATGT +GCGGCCTTCAGGGTAGAGTAATTTGGGTTTCCAAGAATAGTAGAAGGAAGGGTGTAGAAGCTGCAGAAATCGGTAATCTCATGAGTCACTGGACTTTCAAC ++ +CCCFFFFFHHHHHCCCDCDDDD?8< +@D7DHSVN1:151:D12V0ACXX:8:1101:4846:2295 1:N:0:CGATGT +CATAACCTTGGCCAGGTTGACGGAGGCAGAAACCCGAACAACAGTACGGTGGGCCCACGTTCTCGTTACATCTTCCTCCATTCCCTATGCATGCTTCTGTC ++ +CCCFFFFFHHHHHJJJHIIJJJJIJJIJIJIJGHIJJIJIJJJJIJJJIDHHFFFDDDDBDBDDD?BBDDEDDD@ACDDACDDEDCDDDCDCDDDEDCCCD +@D7DHSVN1:151:D12V0ACXX:8:1101:4924:2299 1:N:0:CGATGT +CTTGTTACGACTTCTCCTTCCTCTAAGTGATAAGGTTCAGTGGACTTCTCGCGACGTCGCCGGCGGCGAACCGCCCACGTCGCCGCGATCCGAACACTTCA ++ +BCCFDFFFHHHHHGHIJIIJJJIIJJJFFGIGIIGGGEHHJJJIJJIJJJJJJJJIHHFFDDDDD;BB3>@@>@DB>B0+<05<9<5-0?@??BDBC:@:4 +@D7DHSVN1:151:D12V0ACXX:8:1101:4941:2348 1:N:0:CGATGT +ACTCGGAATTTGGCATTGGAGTGGCATGGAGGGGTTATATTAAACATAAGCGCTACCTTACACTACACCGCTTCTTGGTATCAAATCCACGTATCGGCCGC ++ +CCCFFFFFHHHHHJJJJJJIJFGIJIIJJBGIJJ?DFGGHIGIJGIIJJJIJJJJHHHGHFFFFFFEEEDDDDDDDDDCDDDEDDDDDCCDBCDD@BDDBB +@D7DHSVN1:151:D12V0ACXX:8:1101:4977:2395 1:N:0:CGATGT +CTCATTTGCACACAAAGGCGACGTAATCTCCGGGCTAGACTCAGGAGAAACCGAAGGGTAAATCTTATCACTAACCATTTTACTCACTTTAGAACAAAACC ++ +@@@FFDFDFHHAHEIIIEGGB@?GDGI>D9DA:F6@FC@GHIIIIGGCHHD@9<<99;(;?>C::>A55;>C>AA9:A:ACDCCCCC>@C>:ACCCCBDFHHE3?FEFBD@FBF@ +@D7DHSVN1:151:D12V0ACXX:8:1101:4752:2403 1:N:0:CGATGT +GTAGGGCATATCCTTCGTAGATAGGAACAGTGTGACTCACACCATCACCAGAGTCAAGCACGATACCTGTTGTACGACCACTAGCATAGAGAGAAAGCACA ++ +CBCFFFFFHHHHHJJJJHIJJJJIIJJJJJGIFHIJJJJJJJJJIJJJJJJJJIHIJJIJJJJIJJHHHHHHFFFFDDDDDDDDDDEDDDDDDDCCDCDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:4958:2412 1:N:0:CGATGT +CCCAAATCAGGGCTAGGAGCTTTTATATCTCCAGGAACTTCAAATGTCACAGTTCCATCCCTTTCAACAGATGCAAGTCGGTTCAGCCACTTGATCTTCCT ++ +CCCFFFFFHHHHHIIIJJJJJJJJIJJJJJJJJJJJJJJJJIJJJIIIIJJJHJJJJJJJJJJJJIJJJJJJJJJHHHHHFFDDDCEDDDDDDDDDEDEDD +@D7DHSVN1:151:D12V0ACXX:8:1101:4799:2439 1:N:0:CGATGT +GTACTCTGCTGGTTTGCCAAGCCCAAATGGGTCAAACCCATAAACACCAACTAGGCTCCCATCTAACCACTCTGGAGCCTTGGCTCCTGGATACCATAATG ++ +;@@DDBDD3C7=A?;@7.;@>A=AA3;3>A8(:59:(5>:A:44: +@D7DHSVN1:151:D12V0ACXX:8:1101:4989:2442 1:N:0:CGATGT +GGTTAAGCTATTAGATATCGGAGGGTGAATGTGATGGCAAAAAGATAATAGAAAGTGCAAGTAGTTTAATGTCATTTTAATCCTTACCCTCTCAAATGTTA ++ +@@?DDFFFGGHHHIIJJJJGIIJJI:CDFEHDFGIIIIJIIIIFDHIJIJGGBHI;FHIJJ@DC@EHCHHGEHFFCDFFFFEEEACCECA=ACC@C>CCD; +@D7DHSVN1:151:D12V0ACXX:8:1101:4787:2455 1:N:0:CGATGT +ATGGCTGGAGGCTTTGGAAAACTCCAATAACTTCCCCAGTCTCAGGCTTGCTACTAGTAACACTCAAAGTGATCATCCCTTTCGACGAGGGAGTATTCTTA ++ +?@?DDDDDFFFBFIEEEGHHGGEH>CFH99?DH?DBH9)009B@;(5''8;')0+3@@3>A3 +@D7DHSVN1:151:D12V0ACXX:8:1101:4915:2462 1:N:0:CGATGT +GCATTTATCAACAAGCATCCACTCTCCATTAGGCCGTTGATCGCCTTCATAATATTTCTCACTGGACTCGGGATGAATCTCATGCTTGGATCCATCAATCG ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJIJJJJJJJIJJGJJJJJJJJJJJJJJJGJJJJJJIJJJJHHFFFDEEEEEEDEDDDEDDDDDDDDDDDDDB +@D7DHSVN1:151:D12V0ACXX:8:1101:5225:2314 1:N:0:CGATGT +CTCCAAATCACCCATTTCAGTAAAACAAACATTTATATTCTCTTTTCAAAACGAAAAGTAGAAGCATCACAAACAAAGAACCAACACCAGCATCAATCACA ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJIJJIJJJJJJJJIHIJJJIJJJIIIJIJJJJJJJJJJHHHGFFFFDDDDDDDDDDDDDDDDDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:5079:2459 1:N:0:CGATGT +TGCGGCGATGACGTGATCGTAGGGGGGGGGTCGGAGAAGCTGGGGGATCGGAGGATGGAGAGGACTAGAGATGAGAGCTCGTAGAAAACCCTAGAAGATTG ++ +@@CFFDDFHHHFHHGGJIH?@DHGEG@07@57BD7B6?>ACBB(29?C>@:AC:>+41::05??8>4?9(8<39ACCC:A3 +@D7DHSVN1:151:D12V0ACXX:8:1101:5111:2465 1:N:0:CGATGT +TGAGGAATCATGCTGGATAGAGGGCTTGGTGGATCCAAGACTAGAAGGAAGATTTAGCACGAAACAAGCTGCGCTGATGATCCAGGTAGGAATATCTTGTG ++ +CCCFFFFFHHHHHJJJIJJJJJJJJJJJJEGIGIJJJJIIJJJJHJJJIJIIIJJJJJJJJJJJHHHFFFFFDDDDDDDEEDDDDDC@CDDDDDEEEEDCC +@D7DHSVN1:151:D12V0ACXX:8:1101:5184:2480 1:N:0:CGATGT +AGAAAATCGGGTTTTAAATATATGCAAAGATTAAATGATCTGAGTTTTAGGCCTTAATCTTGAATAGACTCGTACCTGCATTCTCAAATTCTATGGTCAAG ++ +CCCFFFFFHHHFHJJJJJJJJJJJIIJJJIIJIIIJIGJJJJJIDHIIIIGIGHHHIIJJJIIIJJJJJJJIGHHEHFFFFFFFFDAEEEEEDDDDDCDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:5205:2482 1:N:0:CGATGT +TGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCT ++ +BCCDFFFDHHHHHJJJJJJJJJJJJJDHIJHJIIJJJJJJJIJJJIJJJJIJJIJJJJJJJHHHHFFFEEEDEEDDDDDDDDDDDDDDDDDEDDDDDDDD@ +@D7DHSVN1:151:D12V0ACXX:8:1101:5307:2255 1:N:0:CGATAT +CTCCTTGAACACGATTCGCCAAATCAAATCTCGAACGGCTCTGATCATGACACGTGGATAACCCATCAACTCGATCAAGCAATCGGACGGTGTAGCTAGGG ++ +@@CFFDDDFHHHFIGGIGHIJIIEDGIEGIEFBDDEEC@E>ABBD=;CCA??:@<@?9@B&8):>>@4:BBDB09>CACDDCDDCDD55<@>CAB?CBDDDD +@D7DHSVN1:151:D12V0ACXX:8:1101:5333:2280 1:N:0:CGATGT +TCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAACTAAGGCCAGGAGC ++ +?@@FFDDDFHFHF8CC?@EHBG4*:B>DH;B?BEB)=CHID3>>AA(9===@9<5>9<@9:>:3>A?AB?@# +@D7DHSVN1:151:D12V0ACXX:8:1101:5391:2288 1:N:0:CGATGT +AAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACATCTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCAGGAATTTTAACCCAAT ++ +CCCFFFFFHGHGHJJJJIIJIIJIIJIIIJIGHIIIGIHHHHEFFFBDDDCBDDDDBCCBDDD;DDB@?>BDDD@?CEDDCDCCA@CACC@CDDB@A +@D7DHSVN1:151:D12V0ACXX:8:1101:5342:2338 1:N:0:CGATGT +CCTTTGTGGGATCTAGGTTAGCGCGCAGTTGGGCACCGTAACTCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAAATGGCCCACTTGGA ++ +CCCFFFFFGHGFHIJJJGHGGIJJIJIJJJIJJIIIJJGIIJIJJGHHFFFFDBDDDEEDBBDDDDDDDBBACDECCCDCDDDCABDDDDABDD@BBDCC@ +@D7DHSVN1:151:D12V0ACXX:8:1101:5424:2351 1:N:0:CGATGT +TTCTGTTGTTGCACCTGCATGTTTTGATTCCCCACAACCCATTTTCCCTAATATACTTAGAATTAATTTGATGGATGTATGAAAAGAGGGAGAAAGAATGA ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJIJJJJJJIJIJJJJJJJJJJJJJJJJJJJJJJEGHIIJIGIJIHGIJIFEHEHHFFFFFFDEACDDDDDDDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:5263:2387 1:N:0:CGATGT +GCTGGCACAGCAGCGCTAGTATCTGGAGCAGATGCTGTTAATAAAGACACTGGAGAAAGACTGATAGTCGGAAGGTGGGTAGTGGATAGCATAGATCGGAA ++ +CCCFFFFFHHHHHJJJJJJIJJJJJJGIIIIIJJIJJGIJJJJIJIJJIJJJJJJJJJJJJJJIIHHHHHFFDDDCCBD3@B@CDDDE?ACDDC::>BD?< +@D7DHSVN1:151:D12V0ACXX:8:1101:5423:2419 1:N:0:CGATGT +GCAGAACGTTACGTCCTTTCAGATCAATGAAATAAAGAGTTTCAGGGTTAATTGAGATGAACGCTTTGATGATACTAACATGGCCTCCGCTAACAGCTTTG ++ +@CCFFFBDFFHGGIIBGGIIAHHIGGIIIGHGEEHIHIIGHIIGI>F??FDFADBGCHGIGDGGIIIIEGHCAHECCDBEFBCCCCABDDDDDC@CDDDDC +@D7DHSVN1:151:D12V0ACXX:8:1101:5374:2435 1:N:0:CGATGT +CACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGGTCGACTAACCCATG ++ +@@CDDDDFHHFFHGIGIIGGGEHIBECF@:FHIIJJJGHIJGGCGIGBHEEB??CDBB??C8?8@53;0&8349359>BBC4>@CC(3><3989>>8??C9 +@D7DHSVN1:151:D12V0ACXX:8:1101:5392:2436 1:N:0:CGATGT +CGAGAAAGTACAATTCATTTGATGTTTGAAGCAGATTTTTGACCTAAAGCTGCACATAAATACTAACTAGCTTCTGAACAAAAAGGGAAACATGAACGAAA ++ +@@@FF>DFA?DBFGGFEHHIFEEFHGGIBGIEFGIDHIIIGII>GFHGICGIGGGGIGIGGGI@>DHEHFHFFFCCECCCCCCCCBB?@ +@D7DHSVN1:151:D12V0ACXX:8:1101:5319:2459 1:N:0:CGATGT +CTTTACTAAAAAATTCTTCCTCGGAAACAAGTTGAATGTCAGGGTACTTTGACTTGAAATCTTTGCATGCTTTTATAGCTTTGAGGTAGTGGCTCTTCTCA ++ +CCCFFFFFHHHHHJJJJJJJJJJJJJJJJGIIGIIJJIGHIJIJBBHGIJJIJJJIGGGIJJJIFIGIJHHHHHHHCEFFFFEABA>CCDDDDDDCDDDC@ +@D7DHSVN1:151:D12V0ACXX:8:1101:5351:2460 1:N:0:CGATGT +GGTTGATATCATCAGTGGGCAATCTTGCTGCTCCTTTTGAGGAATGGACTGCTGGTGGAACAGCCCTGACTGCACTGATGGATGTTGAAAGAAGACACGGT ++ +CC@FFFFFHHHHHJJIJJJIJJJIJJJJIIJIJJJJJJGHJJGIIIIJJJJJJJJDHIGHJJJJJJJJIHHHHHHFFCFFEEDEEEDDCDDDDDDDDDDD8 +@D7DHSVN1:151:D12V0ACXX:8:1101:5252:2479 1:N:0:CGATGT +TCCAATAACCTTCCTAATGTTGTTGATCATATAAATGAGAGCAGTGGCAAACTCACGATCTGCTTTCTTTGACATTTGCAGATTAATTTGCGAGCCACTAG ++ +C@@DFADFHHHGHIIIGIIIIH@EGC>HF>A=CEDBFFFC=C:BDDCCCCC +@D7DHSVN1:151:D12V0ACXX:8:1101:5285:2496 1:N:0:CGATGT +CCTATGTCCATGTTGAGTTATTGAAGCTGCAACATTTCTGTTATTATAATTAGGTGATCGATGAATCATATTTCCCCCTCCTCCACCCTTTCCGCCGCCAT ++ +CCCFFFFFHHHHHJJIJHHIJJIGJJJJIIJJJFIIJJJIHIHHIGIIJJJJIIFGHIJIJIJIJJIJJIJJJHHHFHIIHFHHFFFFDCCDCB?BBDDB? diff --git a/src/TEST/test.strec.tre b/src/TEST/test.strec.tre new file mode 100644 index 0000000..5c87412 --- /dev/null +++ b/src/TEST/test.strec.tre @@ -0,0 +1 @@ +(((((taxon_4:1,taxon_5:1)45:1,taxon_6:2)456:1,taxon_3:3)4563:1,((taxon_7:2,taxon_8:2)78:1,(taxon_9:2,taxon_10:2)910:1)78910:1)456378910:1,(taxon_11:3,taxon_12:3)1112:2)root; diff --git a/src/TEST/test.tre b/src/TEST/test.tre new file mode 100644 index 0000000..cc8a5a4 --- /dev/null +++ b/src/TEST/test.tre @@ -0,0 +1 @@ +(((TaxonA:0.1,TaxonB:0.03):0.125,TaxonC:0.25):0.4,(TaxonD:0.23,TaxonE:0.16):0.3); diff --git a/src/TEST/test2.tre b/src/TEST/test2.tre new file mode 100644 index 0000000..d882e17 --- /dev/null +++ b/src/TEST/test2.tre @@ -0,0 +1 @@ +((A:0.1,B:0.03):0.125,C:0.25,(D:0.23,E:0.16):0.7); diff --git a/src/TEST/test_nexus.tre b/src/TEST/test_nexus.tre new file mode 100644 index 0000000..15c96a0 --- /dev/null +++ b/src/TEST/test_nexus.tre @@ -0,0 +1,4 @@ +#NEXUS +Begin trees; +tree foo = (((TaxonA:0.1,TaxonB:0.03):0.125,TaxonC:0.25):0.4,(TaxonD:0.23,TaxonE:0.16):0.3); +end; diff --git a/src/TEST/test_part.txt b/src/TEST/test_part.txt new file mode 100644 index 0000000..78c9a5e --- /dev/null +++ b/src/TEST/test_part.txt @@ -0,0 +1,4 @@ +DNA, gene0 = 1-20 +CHARSET gene1a = 21-41\3; +CHARSET geneb1 = 22-41\3; +CHARSET genec1 = 23-41\3; diff --git a/src/TEST/trlateTest.fa b/src/TEST/trlateTest.fa new file mode 100644 index 0000000..29625a6 --- /dev/null +++ b/src/TEST/trlateTest.fa @@ -0,0 +1,10 @@ +>Dendroica_kirtlandii +ATGCCTCAACTAAACCCCACCCCCTGATTTTTTATCATGCTTACTTCGTGACTCACCTTCTCTTTAATCATCCAACCAAAACTCCTATCATTTGTATCAATAAACCCACCATCTAACAAACCATCCATCGCTCCAACCACTACCCCTTGAACCTGACCATGAACCTAA +>Cardellina_canadensis +ATGCCCCAACTAAACCCAAGCCCCTGATTTTTTATCATGCTCACTTCATGACTCACTTTCTCTTTAATTATTCAACCAAAACTCCTATCATTCGTATCAACAAACCCACCATCTAACAAACCACCCATCGCCCCAAGCACCACTCCCTGAACCTGACCATGAACCTAA +>Geothlypis_tolmiei +ATGCCTCAACTAAACCCCAGCCCCTGATTTTTTATCATGCTTACTTCATGATTTACCTTCTCCCTAATTATCCAACCCAAGCTCCTATCATTCGTATCAATAAACCCACCATCTAGCAAACCACGCATCACCCCAAACACCACCCCTTGAGCCTGACCATGAACCTAA +>Dendroica_coronata +ATGCCTCAACTAAACCCCAACCCCTGATTTTTTATCATGCTCACTTCATGACTCACCTTCTCTCTAATCATCCAACCTAAGCTCCTATCATTTGTATCGATAAACCCACCATCTAGCAAACCACCCATCGCTCCAACCACCACCCCCTGAACCTGACCATGAACTTAA +>Leiothlypis_celata +ATGCCTCAACTAAACCCAAGCCCTTGATTTTTTATCATGCTCACTTCATGACTCACTTTCTCTTTAATTATCCAACCCAAACTCCTATCATTCGTGTCAATAAACCCGCCATCTAGCAAACCACCTATCGCCCCAAGCACAACTCCCTGAACCTGACCATGAACCTAA diff --git a/src/TEST/ultra_100.tre b/src/TEST/ultra_100.tre new file mode 100644 index 0000000..a5c98e4 --- /dev/null +++ b/src/TEST/ultra_100.tre @@ -0,0 +1 @@ +((((s1:0.3603553431,s2:0.3603553431):0.8968782862,s3:1.257233629):0.4207546592,(((s4:0.1190332191,s5:0.1190332191):0.02544171746,s6:0.1444749366):0.7647640019,s7:0.9092389385):0.76874935):0.06349158892,((s8:0.3106889265,s9:0.3106889265):0.1031508249,s10:0.4138397514):1.327640126); diff --git a/src/TEST/ultra_100_extralong.tre b/src/TEST/ultra_100_extralong.tre new file mode 100644 index 0000000..d493d9b --- /dev/null +++ b/src/TEST/ultra_100_extralong.tre @@ -0,0 +1 @@ +(((((s19:8.919229497,s21:8.919229494):19.95224961,(((s28:1.946092244,(s29:1.087576191,(s30:0.892917128,s31:0.892917128):0.1946590628):0.8585160526):8.3971209,s32:10.34321315):11.09543257,((s33:7.226304805,((s34:2.670349682,s35:2.670349682):2.222933978,s36:4.89328366):2.333021145):7.192871235,((s38:0.6421928454,s39:0.6421928454):0.0263742241,s40:0.6685670695):13.75060897):7.019469682):7.432833389):9.421849134,(((s46:12.20104112,s49:12.20104112):6.604755154,(s51:5.415238384,s52:5.415238384):13.39055789):7.973707395,s56:26.77950367):11.51382458):38.80946142,(((((s87:3.690843889,s88:3.690843889):11.45073371,(((s90:4.720117293,(s91:3.997568422,s92:3.997568422):0.722548871):1.54594792,(s93:2.198184551,s94:2.198184551):4.067880663):0.4042469457,s95:6.670312157):8.47126544):12.39306906,((s98:5.074415446,s100:5.074415446):14.97270317,s104:20.04711862):7.487528037):20.7336537,s126:48.26830035):16.54193839,((((s133:19.19452408,(s135:5.458627874,(s136:0.5006869268,s137:0.5006869268):4.957940945):13.73589621):8.335064656,s140:27.52958874):2.286174247,((s151:16.86265353,((s153:3.929431493,s154:3.929431493):0.5895208589,(s155:4.477463366,(s156:2.7123332,s157:2.7123332):1.765130166):0.04148898642):12.34370117):11.43773361,s162:28.30038714):1.515375849):2.627722159,((s169:7.840935141,s170:7.840935141):7.594637575,(s172:13.32986006,(s173:6.721414978,((s174:0.3080707103,s175:0.3080707103):4.107433663,s177:4.415504373):2.305910603):6.608445087):2.105712657):17.00791243):32.3667536):12.29255092):22.89721033,((((((((s213:0.2029741842,s214:0.2029741842):12.71610281,((s216:5.616429623,(s218:3.713394097,s219:3.713394097):1.903035527):3.114968709,(s221:4.941089359,s222:4.941089361):3.790308973):4.187678662):2.781171964,s224:15.70024896):8.113641143,(s228:16.40398772,s229:16.40398772):7.409902377):20.19393189,(((s235:1.164761961,s237:1.164761961):30.92897799,(((s239:11.80920341,(s240:1.145193454,s241:1.145193454):10.66400996):6.476060724,(s243:5.366328664,s244:5.366328664):12.91893548):0.5879546054,((s246:1.021385454,s247:1.021385454):2.278992972,s248:3.300378425):15.57284032):13.22052121):1.942298314,((((s252:0.8909838051,s253:0.8909838051):1.446077873,(s254:0.5364767172,s255:0.5364767172):1.800584961):0.5351456596,s256:2.872207338):1.872321111,s257:4.744528449):29.29150981):9.971783723):17.83929796,(s266:27.92939399,(s268:4.234731747,s269:4.234731747):23.69466224):33.91772596):17.52852757,(((((((s283:0.4995078195,s284:0.4995078195):2.376658579,s285:2.876166399):13.2757501,s286:16.15191649):14.55523323,(s288:9.130600983,(s289:5.339503764,s290:5.339503764):3.791097218):21.57654874):2.471388135,((s292:0.1094902985,s293:0.1094902985):21.11008484,s296:21.21957514):11.95896272):12.97210001,s307:46.15063787):9.351516506,(s325:1.575825061,s326:1.575825061):53.92632932):23.87349314):10.77139891,(((s340:9.940550523,s341:9.940550523):21.02957737,((s345:9.069122675,s347:9.069122677):1.968266562,(s348:7.197873819,s350:7.197873819):3.839515418):19.93273866):45.33019168,(s381:4.52614792,s382:4.52614792):71.77417166):13.84672685):9.852953562); diff --git a/src/TEST/ultra_100_long.tre b/src/TEST/ultra_100_long.tre new file mode 100644 index 0000000..4f8ee17 --- /dev/null +++ b/src/TEST/ultra_100_long.tre @@ -0,0 +1 @@ +(((((s19:1.817047839,s21:1.817047838):4.064722413,(((s28:0.3964628007,(s29:0.2215637537,(s30:0.1819073204,s31:0.1819073204):0.03965643328):0.1748990469):1.710682564,s32:2.107145365):2.260389397,((s33:1.472160968,((s34:0.5440103453,s35:0.5440103453):0.4528616941,s36:0.9968720395):0.4752889284):1.465349797,((s38:0.1308291397,s39:0.1308291397):0.005373023187,s40:0.1362021629):2.801308602):1.430023997):1.51423549):1.919442774,(((s46:2.485626747,s49:2.485626748):1.345537312,(s51:1.103205967,s52:1.103205967):2.727958092):1.624423701,s56:5.455587759):2.345625266):7.906360973,(((((s87:0.7519079887,s88:0.7519079887):2.332772236,(((s90:0.9615941522,(s91:0.8143946811,s92:0.8143946811):0.1471994711):0.3149443938,(s93:0.4478196787,s94:0.4478196787):0.8287188674):0.08235420328,s95:1.358892749):1.725787476):2.524747161,((s98:1.033772662,s100:1.033772662):3.050276703,s104:4.084049366):1.525378021):4.223912017,s126:9.833339402):3.369965243,((((s133:3.910356664,(s135:1.112045383,(s136:0.1020011985,s137:0.1020011985):1.010044184):2.798311282):1.69804031,s140:5.608396975):0.4657451606,((s151:3.435302137,((s153:0.8005136548,s154:0.8005136548):0.1200986703,(s155:0.9121600846,(s156:0.5525633331,s157:0.5525633331):0.3595967515):0.008452240538):2.514689811):2.330123824,s162:5.76542596):0.3087161747):0.5353261592,((s169:1.597375004,s170:1.597375004):1.547198645,(s172:2.715592577,(s173:1.369303544,((s174:0.06276093901,s175:0.06276093901):0.836776704,s177:0.899537643):0.4697659006):1.346289034):0.4289810721):3.464894645):6.593836351):2.504269354):4.664677208,((((((((s213:0.04135041069,s214:0.04135041069):2.590556409,((s216:1.144193152,(s218:0.7565019738,s219:0.7565019738):0.3876911781):0.6345892504,(s221:1.006611137,s222:1.006611137):0.7721712655):0.8531244167):0.5665873391,s224:3.198494158):1.652931356,(s228:3.341861587,s229:3.341861587):1.509563926):4.113958533,(((s235:0.2372882327,s237:0.2372882327):6.300929092,(((s239:2.405800585,(s240:0.2333016872,s241:0.2333016872):2.172498898):1.319319359,(s243:1.093241956,s244:1.093241956):2.631877989):0.1197795892,((s246:0.2080792104,s247:0.2080792104):0.4642821732,s248:0.6723613836):3.17253815):2.693317792):0.3956898917,((((s252:0.181513459,s253:0.181513459):0.294598617,(s254:0.1092923845,s255:0.1092923845):0.3668196915):0.1090212181,s256:0.5851332941):0.3814339602,s257:0.9665672543):5.967339962):2.03147683):3.634266595,(s266:5.689846304,(s268:0.8627101895,s269:0.8627101895):4.827136115):6.909804337):3.570955669,(((((((s283:0.1017609878,s284:0.1017609878):0.4841788561,s285:0.5859398439):2.70456916,s286:3.290509003):2.965228677,(s288:1.860108969,(s289:1.08777712,s290:1.08777712):0.7723318488):4.395628712):0.5034773992,((s292:0.02230563865,s293:0.02230563865):4.300599513,s296:4.322905152):2.436309928):2.642708802,s307:9.401923882):1.905114434,(s325:0.3210310401,s326:0.3210310401):10.98600728):4.863567994):2.194376444,(((s340:2.025113924,s341:2.025113924):4.28419833,((s345:1.847584454,s347:1.847584454):0.4009802085,(s348:1.466368936,s350:1.466368936):0.7821957262):4.060747592):9.234780522,(s381:0.9220782242,s382:0.9220782242):14.62201455):2.820889978):2.007268451); diff --git a/src/TEST/ultra_100_nexus.tre b/src/TEST/ultra_100_nexus.tre new file mode 100644 index 0000000..62190a1 --- /dev/null +++ b/src/TEST/ultra_100_nexus.tre @@ -0,0 +1,5 @@ +#NEXUS +Begin trees; +tree foo = ((((s1:0.3603553431,s2:0.3603553431):0.8968782862,s3:1.257233629):0.4207546592,(((s4:0.1190332191,s5:0.1190332191):0.02544171746,s6:0.1444749366):0.7647640019,s7:0.9092389385):0.76874935):0.06349158892,((s8:0.3106889265,s9:0.3106889265):0.1031508249,s10:0.4138397514):1.327640126); +tree rerooted = (s4:0.0595166,(s5:0.119033,(s6:0.144475,(s7:0.909239,(((s1:0.360355,s2:0.360355):0.896878,s3:1.25723):0.420755,((s8:0.310689,s9:0.310689):0.103151,s10:0.41384):1.39113):0.768749):0.764764):0.0254417):0.0595166); +End; diff --git a/src/TEST/ultra_100_nexus_translation_table.tre b/src/TEST/ultra_100_nexus_translation_table.tre new file mode 100644 index 0000000..7c283fc --- /dev/null +++ b/src/TEST/ultra_100_nexus_translation_table.tre @@ -0,0 +1,16 @@ +#NEXUS +Begin trees; + translate + 1 s1, + 2 s2, + 3 s3, + 4 s4, + 5 s5, + 6 s6, + 7 s7, + 8 s8, + 9 s9, + 10 s10; + +tree foo = ((((1:0.3603553431,2:0.3603553431):0.8968782862,3:1.257233629):0.4207546592,(((4:0.1190332191,5:0.1190332191):0.02544171746,6:0.1444749366):0.7647640019,7:0.9092389385):0.76874935):0.06349158892,((8:0.3106889265,9:0.3106889265):0.1031508249,10:0.4138397514):1.327640126); +End; diff --git a/src/TEST/ultra_100_short.tre b/src/TEST/ultra_100_short.tre new file mode 100644 index 0000000..f0d42d0 --- /dev/null +++ b/src/TEST/ultra_100_short.tre @@ -0,0 +1 @@ +(((((s19:0.08919229497,s21:0.08919229494):0.1995224961,(((s28:0.01946092244,(s29:0.01087576191,(s30:0.00892917128,s31:0.00892917128):0.001946590628):0.008585160526):0.083971209,s32:0.1034321315):0.1109543257,((s33:0.07226304805,((s34:0.02670349682,s35:0.02670349682):0.02222933978,s36:0.0489328366):0.02333021145):0.07192871235,((s38:0.006421928454,s39:0.006421928454):0.000263742241,s40:0.006685670695):0.1375060897):0.07019469682):0.07432833389):0.09421849134,(((s46:0.1220104112,s49:0.1220104112):0.06604755154,(s51:0.05415238384,s52:0.05415238384):0.1339055789):0.07973707395,s56:0.2677950367):0.1151382458):0.3880946142,(((((s87:0.03690843889,s88:0.03690843889):0.1145073371,(((s90:0.04720117293,(s91:0.03997568422,s92:0.03997568422):0.00722548871):0.0154594792,(s93:0.02198184551,s94:0.02198184551):0.04067880663):0.004042469457,s95:0.06670312157):0.0847126544):0.1239306906,((s98:0.05074415446,s100:0.05074415446):0.1497270317,s104:0.2004711862):0.07487528037):0.207336537,s126:0.4826830035):0.1654193839,((((s133:0.1919452408,(s135:0.05458627874,(s136:0.005006869268,s137:0.005006869268):0.04957940945):0.1373589621):0.08335064656,s140:0.2752958874):0.02286174247,((s151:0.1686265353,((s153:0.03929431493,s154:0.03929431493):0.005895208589,(s155:0.04477463366,(s156:0.027123332,s157:0.027123332):0.01765130166):0.0004148898642):0.1234370117):0.1143773361,s162:0.2830038714):0.01515375849):0.02627722159,((s169:0.07840935141,s170:0.07840935141):0.07594637575,(s172:0.1332986006,(s173:0.06721414978,((s174:0.003080707103,s175:0.003080707103):0.04107433663,s177:0.04415504373):0.02305910603):0.06608445087):0.02105712657):0.1700791243):0.323667536):0.1229255092):0.2289721033,((((((((s213:0.002029741842,s214:0.002029741842):0.1271610281,((s216:0.05616429623,(s218:0.03713394097,s219:0.03713394097):0.01903035527):0.03114968709,(s221:0.04941089359,s222:0.04941089361):0.03790308973):0.04187678662):0.02781171964,s224:0.1570024896):0.08113641143,(s228:0.1640398772,s229:0.1640398772):0.07409902377):0.2019393189,(((s235:0.01164761961,s237:0.01164761961):0.3092897799,(((s239:0.1180920341,(s240:0.01145193454,s241:0.01145193454):0.1066400996):0.06476060724,(s243:0.05366328664,s244:0.05366328664):0.1291893548):0.005879546054,((s246:0.01021385454,s247:0.01021385454):0.02278992972,s248:0.03300378425):0.1557284032):0.1322052121):0.01942298314,((((s252:0.008909838051,s253:0.008909838051):0.01446077873,(s254:0.005364767172,s255:0.005364767172):0.01800584961):0.005351456596,s256:0.02872207338):0.01872321111,s257:0.04744528449):0.2929150981):0.09971783723):0.1783929796,(s266:0.2792939399,(s268:0.04234731747,s269:0.04234731747):0.2369466224):0.3391772596):0.1752852757,(((((((s283:0.004995078195,s284:0.004995078195):0.02376658579,s285:0.02876166399):0.132757501,s286:0.1615191649):0.1455523323,(s288:0.09130600983,(s289:0.05339503764,s290:0.05339503764):0.03791097218):0.2157654874):0.02471388135,((s292:0.001094902985,s293:0.001094902985):0.2111008484,s296:0.2121957514):0.1195896272):0.1297210001,s307:0.4615063787):0.09351516506,(s325:0.01575825061,s326:0.01575825061):0.5392632932):0.2387349314):0.1077139891,(((s340:0.09940550523,s341:0.09940550523):0.2102957737,((s345:0.09069122675,s347:0.09069122677):0.01968266562,(s348:0.07197873819,s350:0.07197873819):0.03839515418):0.1993273866):0.4533019168,(s381:0.0452614792,s382:0.0452614792):0.7177417166):0.1384672685):0.09852953562); diff --git a/src/TEST/un_aln_nuc.fa b/src/TEST/un_aln_nuc.fa new file mode 100644 index 0000000..5da2af0 --- /dev/null +++ b/src/TEST/un_aln_nuc.fa @@ -0,0 +1,8 @@ +>Sequence5 +ATGATGATGATGATG +>Sequence1 +ATGAAAAAG +>Sequence2 +ATG +>Sequence3 +ATGATGATGATGATG diff --git a/src/TEST/unaligned.fa b/src/TEST/unaligned.fa new file mode 100644 index 0000000..512a599 --- /dev/null +++ b/src/TEST/unaligned.fa @@ -0,0 +1,32 @@ +>Apteryx +AAAAAGGCATTGTGGTTGGAATAAAGGTGAGTGTTTGTACATGTCTGGCTGGTGCTCTAAACCCTATTTCCAAWGAGAACTATAATGTAGGGGCTGCACTCTCCCTTGCAAAACAGTTTTTTGCTTGTTTTTGAAATACCTAGAGGATCTCTGCCCCCATTCTCTGTACAGCTCCTGTACAGATAACCAAGACACATTTGTGTATTTACATATGACCTGGGACCTTTTCATCCAGCACTACTTCCTTGCAACAAATGTTGCATCATTCACTGAAATTAAACCCCTTCTCTCAGTACACAAACTAAAATCCTTTCTGAGGCTGACAGACCTCTTGAGCTGTTCCCTGCAGCCACCTGCATATTGCCTGATCCTCTTATCCAGCTCACTCCTTTTCTTCCCCTTTGCTCCAACACTTCTCCTCTATCTCCCCTTAGCCTATTCAGTCCCATACTTTACCCACAGTTTGTCTGCAAAGACAGACTAGCCATGGGTCACAAGATAAGTAACAGATTGATCTCCATCTATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACCACCATACAAGGCAAGGAGAGACCTAAGTAGCCATAATTATGATTGGTAAAGTGAAAGCCATCAGATGACTAAASTGGTTTGCAGCCTTAGCTGCTGTTATGATACTTTTCAGGACTATGTTGAGAACACAAAGTTCAGCCCTACCCATAAAGAACTGCTCTCAGTGAAGCACTGTTCTTTCATCTGCAGGGCTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGCTGACTTTGGCAAATGGCGTGCAGTGCTGAAGATCACCAGCACAACTCCCTCTCAACTCGCTATCCAGGAGAATGCTAATGCACTAGCACGCTATGCCAGCATCTGCCAACAGGTATCTACCCTCCACTAATCTTTCTTGAGATGCTGCTATCCTTTCTCACTGTTTCCTGTGATAACAGCCAGATATCTTGAAAGACCGATCTCTGTGAGGGGTTTCAAAAACAATGAGGAAGAGGGGCCATACAGCAAGAAGGAATACTATCAATGTTGGGGTAGACAGCAAGGACAGTTTTTCTTCCACACCTGCAAAGACTTTCCTGTTTTTCTTTCCTTAGCATGGGTTGGTGCCCATTGTGGAGCCAGAAATCTTGCCTGATGGAGACCATGATCTCCAACGTTGTCAGTATGTCACAGAAAAGGTAAGAGAGATCCTTGCCATGCCCCTCTTCAAAAATCAGTGGTTAATCTTGTGCAGAGTTTGCATTCACGGATGTCAGGGAGTTTTGACCAAGAAAGTACTTCATAATTGCGCCACAGAAATGAGCTGCTCACAAATGATGATTTAACAGCAAACGTGAGACTAAGATCCGTGCTTTTGGATATCCATTCAAACCTCCGTTAGAAGCATTTTCCACCTCTGAAAGATTCACTGGGAGTAAAAGTATCTACCTCTCTTTTGGTACCCCTGTTCACAGGGACAAATCCAATAAACATAAAGAGTGGTATCTTAGTCATCCCAAAAGCAGTGGTGCCTCCAGGGTTGCATGACCGACCCCTGTGATAAACTTCAAGAGAAGGGGAAGTTCAGTTTGATCTTCTTTCCACACTCTCAAGCATTAAGCTGCCTTTCCACAACAGGCTGAGCATGCTGTTGAAGATCTGTGGGTGTGAATTAGATGGGTCTCAGTATGTGAAAATCTCAGGAAGAGTCTGTATTTAATCCTCCTGTTCTCAGGTTCTGGCTGCTGTCTACAAGGCCTTGAATGATCATCATGTCTACTTGGAAGGGACACTGCTGAAACCCAATATGGTGACGGCTGGACACTCCTGCCCCAAGAAGTACACCCCTCAGGATGTAGCCATAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCAGCTGTCCCTGGTGATTCCCAATTTATTACTATGTATCCATTACCATGTATCAATCCTTCACATTGTCACTCTCACTGGCCTTGCTCCTACATACGATACACTCACTTCTCTGGCACGTAAGGGTCAGGGACTGTGGTGGCTGCAGCACTCAGCTTCTTCCCTCCTTATTGCAGGAATCTGCTTCCTGTCTGGAGGCCAAAGTGAAGAGGAGGCTTCTCTCAACCTAAATGCCATGAAT +>Casuarius +AAAAAGGCATTGTGGTGGGAATAAAGGTGAGTGTCTGTACATGTCTGGCTGGCACAATACTCTAAACCCTRTTTCCAAGGAGAACTATAATATAGGGGCTGCACTCTCCCTTGCAAACCAGTTTTTTGCTTGTTTCTGAAATACCTAGAGGATTTCTGCCCCCGTTCTTTGTACGGCTTTTGTACAAATAAGCAGGACACATTTGTGCATTTACATATGATCTGGGACCTTTTCACCCAGCACTACTTCCCTGCAACAAATGCTGCATCATTCACTGAAATTAAACCTCTTCTCTCAGTACACAAACTAAAATCCTTTCTGAGGCTGACAGAACTCTTGACCTGTTCCCTGCAACCCCCTGTGTATTGCCTGATCCTCTTACCCAGTTCATTCCTTTTCTTCCCCTTTGCTCCAACACTTCTCCCCTATCTCCCCTTAGCCTATTCAGTCCCATACTTTACCCACAGTTTGTCTGCAAAAACAGACTAGCCATGGGTCACAAGATAAGTAACAGACTGATATCCATCTATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACCACCATACAAGGCAAGGAGAGATCTAAGTAGCCATAATTATGACTGGTAAAGTGAAAGCCATCAGATGACTAAAGGGGTTTGCAGCCTTAGCTGGTGTCATGATACTTTTCAGTACTATGTTGAGAACACAAAGTTCAGCCCTACCCATGAAGGACTGCTCTCAGTGAAGCACTGTTCTTTCATCTGCAGGGCTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGTTGACTTTGGCAAATGGCGTGCGGTGCTGAAGATCACCAGCACAACTCCCTCTCAACTCGCTATCCAGGAGAATGCTAACGCACTAGCACGCTACGCCAGCATCTGCCAGCAGGTACCTATCCTCCACTAATCTTTCTTGAGATGCTGTTACCCTTTCTCATTGTTTCCCATGGTAACAGCTAGATATCTTGAAAGACCGATCTCTGCAAGGGGTTTCAAAAACAATGAGAAAGAGGGACCATACAGCAAGAAGGAATACTATCAATGTTGAGGGAGACAGCAAAGACAGTTTTTCTTCCATACCTGCAAAGACTTTCCTGTTTTTCTTTCCTTAGCACGGGTTGGTGCCCATTGTGGAGCCAGAAATCTTGCCTGATGGAGACCATGATCTCCAACATTGTCAGTATGTCACAGAAAAGGTAAGAGATCTTTGCCATGCCCTTCTTCAAAAATCAGTGGTTAATCTTTCGCAGAGTTTGCATTCACAGATCTCAGGGAGTTTTGACCAAGAAAGTACTTCCTAACTGCACCAGAGAAATCAGTTGCTCACAAGTGATGATTTAATAGCAAATGTGAGACTAGGATCCTTGCTTTTGGATGTCCATTCAAACCTCCATTAGAAGCATTCTCCATCTCAGAAAGATTCACTGGGGGTAAAAGTATCTATCTCTCTTTCAGTACTCCTGTTCACAGGGACAAATCCAATAAACATAAAGAGTGGTATATTAGTCATCGCAAAAGCAGTGGTGTCTCCAGGGTTGCATTACTGACTCCTGTGATAAACTTCAAGAGAAAGGGAAGTTCAGTTTGATCTTCTTGCCACACTCTCAAGCAATAAGCTGTCTTTCCACAACAGGCTGAGCACACTGTTCAAGAATCTCTGGGTGTGAATTAGATGGGTCTTAGTATGTGAAGATCTTAGCATGGGTCTGTATTTAATCCTCCTGTTCTCAGGTTCTGGCTGCTGTCTACAAGGCCTTGAATGATCATCATGTCTACTTGGAAGGGACACTGCTGAAACCCAATATGGTGACGGCTGGGCATTCCTGCCCCAAGAAGTACACCCCTCAGGATGTAGCCATAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTCCCAGGTGATTCCCAATTTATTACTATCTATCCATTACTATGTACCAATCTTTCACATTGTCACTCTCACTGGCCTTGCTCCCACATATGATACACTCACTTCTCTGGCACATAAGGGTCAGGGACTGTGGTGAGTGCAGCACTCAGCTTCTTCCCCTTTTTATTGCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACCTAAATGCCATGAAT +>Dromaius +AAAAAGGCATTGTGGTGGGAATAAAGGTGAGTGTCTGTACATGTCTGGCTGGCACAATACTCTAAACCCTATTTCCAACGAAAACTATAACATAGGGGCTGCACTCTCCCTTGCAAACCAGTTTTTTGCTTGTTTCTGAAATACCTAGAGGATTTCCGCCCCCGTTCTTTGTATGGCTTTTGTACAAATAACCAGGACACATTTGTGCATTTACATACGATCTGGGACCTTTTCATCCAGCACTACTTCCCTGCAACAAATGCTGCATCATTCACTGAAATTAAACCTCTTCTCTCAGTACACAAACTAAAATCCTTTCTGAGGCTGACAGAACTCTTGAGCTGTTCCCTGCAACCCCCTGTGTATTGCCTGATCCTCTTACCCAGTTCACTCCTTTTCTTCCCCTTTGCTCCAACACTTCTCCCCTATCTCCCCTTAGTCTATTCAGTCCCATACTTTACCACAGTTTGTCTGCAAAGACAGACTAGCCATGGGTCACAAGATAAGTAACAGACTGACATCCATCTATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACCACCATACAAGGCAAGGAGAGATCTAAGTAGCCATAATTATGACTGGTAAAGTGAAAGCCATCAGATGACTAAAGGGGTTTGCAGCCTTAGCTGGTGTCATGATACTTTTCAGTACTATGTTGAGAACACCAAGTTCAGCCCTACCCATGAAGGACTGCTCTCAGTGAAGCACTGTTCTTTCATCTGCAGGGCTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGTTGACTTTGGCAAATGGCGTGCGGTGCTGAAGATCACCAGCACAACTCCCTCTCAACTCGCTATCCAGGAGAATGCTAAYGCACTAGCACGCTACGCCAGCATCTGCCAGCAGGTACCTACCCTCCACTAATCTTTCTTGAGATGCTGTTACCCTTTCTCATTGTTTCCCATGATAACAGCGAGGTATCTTGAAAGACCGATCTCTGCGAGGGGTTTCAAAAACAATGAGAAAGGGGGACCATACAGCAAGACGGAATACCATCAGTGTTGAGGGAGACAGCAAAGACAGTTTTTCCTCCATACCTGCAAAGACTTTCCTGTTTTTCTTTCCTTAGCACGGGTTGGTGCCCATTGTGGAGCCAGAAATCTTGCCTGATGGAGACCATGATCTCCAACATTGTCAGTATGTCACAGAAAAGGTAAGAGATCTTTGCCATGCCCTTCTTCAAAAATCAGTGGTTAATCTTTTGCAGAGTTTGCATTCACAGATCTCAGGGAGTTTTGACCAAGAAAGTACTTCATAACTGCGCCAGAGAAATCAGCTGCTCRCAAGTGATGATTTAATAGCAAATGTGAGACTAGGATCCTTGCTTTTGGATGTCCATTCAAACCTCTGTTAGAAGCATTCTCCATCTCAGAAAGATTCACTGGGGGTAAAAGTATCTATCTCTCTTTCAGTACTCCTGTTCACAGGGACAAATCCAATAAACATAAAGAGTGGTGTATTAGTCATCGCAAAAGCAGTGGTGTCTCCAGGGTTGCATTACTGACTCCTGTGATAAACTTCAAGAGAAAGTGAAGTTCAGTTTGATCTTCTTTCCACACTCTCAAGCAATAAGCTGTCTTTCCACAATAGGCTGAGCACACTGTTGAAGAATCTGTGGGTGTGAATTAGATGGGTCTTAGTATGTGAAGATCTCAGCATGGGTCTGTATTTAATCCTCCTGTTCTCAGGTTCTGGCTGCTGTCTACAAGGCCTTGAATGATCATCATGTCTACTTGGAAGGGACACTGCTGAAACCCAATATGGTGACGGCTGGGCATTCCTGCCCCAAGAAGTACACCCCTCAGGATGTAGCCATAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTCCCTGGTGATTCCCAATTTATTACTATCTATCCATTACTATGTACCAATCTTTCACATTGTCACTCTCACTGGCCTTGCTCCCACATATGATACACTCACTTCTCTGGCACATAAGGGTCAGGGACTGTGGTGAGTGCAGCACTCAGCTTCTTCCCCTCTTTATTGCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACCTAAATGCCATGAAT +>Rhea +AAAAAGGCATTGTGGTGGGAATAAAGGTGAGTGTCTGTACATGTGTCTGGCTGGCACAATACTCTAAACACTATTTCCAATAAGAACTATAATATAGGGGCTACACTCTCCCTTGTAGACCAGTATTTTGCTTGTTTCTGAAAATACCTAGAGGATCTCTGCCCCCATTCTCTGTATAGTTTTTGTACAAATATCCAGGACACATTTGCGCATTTACATAGAATCCAGGACCTTTTCATCCAGCAAAGGATGTACTTCCTTGTACAAATGTTACATCACACACTGAAATTAAACCTCTTCTCTCAGTACACAAACTAAAATCCTTTCTGAGTCTGACAGAACTCTTGAGCTGTTCCCTGCAGCCACCTGCATATTATCTGATCCTCTTACCCAGTTCACTCCTTTCTTTCTCCTTTTCTTTAACACTTCTCAGATATGTCCCTTTAGCCTATTAAGTCCAATACTTTACCCACGGTTTGTTTGCAAAGACAGACTAGTCATAGATCACAAGATAAGTAACAGATTGATCTCCATGTATTTTTCCTGTCTCCACAGTTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACTACCATACAAGGCAAGGAGAGATCTAAGTAGCCATAATTATGATTGGTAAAGTGAAAGCCATCAGATGACTAAACTCGTTCACAGGCCTTAGCTGGTGTCATGTTACATTTCATGGTGAAAGCACTAAGTTCAGCCTTCTCATAAAGAACTGCTGTCWGTGAAGCACTGTTCTTTCATCTGCAGGACTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGTTGACTTTGGCAAATGGCGTGCAGTGCTGAAGATAACCAGCACAACTCCCTCTCAACTTGCTATCCAGGAGAATGCTAACACACTAGCACGCTACGCCAGCATCTGCCAGCAGGTATCTACCCTCTATTAATCTTTCCTGAGATGCTGTTACTGTTTCTTACTGTTTTCTGTAATAACAGCTATTTTGAAAGATCAGTCCCTGTGAGAGGTTTCAGAGACMATGAAGAAGAAGAGCCATACAGYAAGGAGGAATACTATCAATGTTGGGGTAGACAGCAAGGACAGTTTTTCTGCCACATCTGCAAAGACTTTCCTGTTTTTCTTTCCTTAGCATGGATTGGTGCCCATTGTGGAGCCACAAATCTTGCCTGATGGAGATCACGATCTCCAACGTTGTCAGTATGTCACAGAAAAGGTAAGAGAACCTTTCCATATCCATCTTCACAAATCAGTGGTTAATCTTGTGCAGAGTTTGCACTCACAGATCTCAGGGACTTTTGACCAAGAAAGTTCTTCATAATTGCACTACAGAAATGAGTTAGTCACAAAAGATGATTTAATAGCAAATGTGAGACTAGGATCTTTGCTTCTTGATGTCCATTCAAACGTCTCTTAGAAGCATTCTCCATCTCAGAAATATTCACTGGGAGTAAAAGAATCTACCTCTCTTTTGGTATCCCTTTTCACAGGGACAAATCCAATAAACATGAAGAGTGGTATCCTAGTCATTCCAAAAGCAGTGGTGTCTCCAGGGTTGCATTACTGACCCCATGATGAACTTCAAGAGAAATGGAAGTTAGTTTGATCTTCTTTCTATGCTCTCAAGCAATAAGCTCTCTTTCCACAACAGGTTGAGCACACTGTTGAAGAATCTGTGGGTGAGAATTAGACGAATCTCAGTATGTGAAGATCTCAGCATGGGGTCTGTATTTAATCCTCTTGTTCTCAGGTTCTGGCTGCTGTCTACAAGGCTTTGAATGATCATCATGTCTACTTGGAAGGGACACTGCTGAAACCCAATATGGTGACGGCTGGGCATTCCTGCCCCAAGAAGTACACCCCTCAGGATGTAGCCATAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTCCCTGGTAATTCCCAATTTATTATTATGTATCCACTACTATGTATTCACATTGTCACTTTCACTAGCCTTGCTTCTACCTGTGATACACTCAATTCTTTGGCACATAAGGGTCAGGGAGTGTGGTGCCTGCAGCACTCAGCTTCTTCCTCTCCTTATTGCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACCTAAATGCCATGAAT +>Pterocnemia +AAAAAGGCATTGTGGTGGGAATAAAGGTGAGTGTCTGTACATGTGTCTGGCTGGCACAATACTCTAAACACTATTTCCAATAAGAACTATAATATAGGGGCTGCACTCTCCCTTGTAGACCAGTATTTTGCTTGTTTCTGAAAATACCTAGAGGATCTCTGCCCCCATTCTCTGTATAGTTTTTGTACAAATATCCAGGACACATTTGTGCATTTACATATAATCCAGGACCTTTTCATCCAGCAAACGATGTACTTCCTTGTACGAATGTTACATCACACACTGAAATTAAACCTCTTCTCTCAGTACACAAACTAAAATCCTTTCTGAGTCTGACAGAACTCTTGAGCTGTTCCCTGCAGCCATCTGCATATTATCTGATCCTCTTACCCATTTCACTCCTTTCTTTCTCCTTTTCTTTAACACTTCTCAGATATGTCCCTTTAGCCTATTAAGTCCAATACTTTACCCACGGTTTGTTTGCAAAGACAGACTAGTCATAGGTCACAAGATAAGTAACAGATTGATCTCCATGTATTTTTCCTGTCTCCACAGTTGGATAAAGGCACAGCACCTCTAGGAGGAACAAATGGAGAAACTACCATACAAGGCAAGGAGAGATCTAAGTAGCCATAATTATGATTGGTAAAGTGAAAGCCATCAGATGACTAAACTCGTTCACAGCCTTAGCTGGTGTCATGTTACATTTCATGTTGAAAGCACTAAGTTCAGCTTTCCCATAAAGAACTGCTGTCAGTGAAGCACTGTTCTTTCATCTGCAGGACTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGTTGACTTTGGCAAATGGCGTGCAGTGCTGAAGATAACCAGCACAACTCCCTCTCAACTTGCTATCCAGGAGAATGCTAACACACTAGCACGCTATGCCAGCATCTGCCAGCAGGTATCTACCCTCTACTAATCTTTCCTGAGATGTTGTTACTGTTTCTTATTGTTTCCTGTGATAACAGCTAGATATTTTGAAAGATCAGTCCCTGTGAGAGGTTTCAGAGACAATGAAGAAGAAGAGCCATACAGCAAGAAGGAATACTATCAATGTTGGGRAAGACAGGAAGGACAGTTTTTCTGCCACATCTGCAAAGACTTTCCTGTTTTTCTTTCCTTAGCATGGATTGGTGCCCATTGTGGAGCCAGAAATCTTGCCTGATGGAGATCATGATCTCCAACGTTGTCAGTATGTCACAGAAAAG +>Struthio +AAAAAGGCATTGTGGTCGGAATAAAGGTGAGCGTCTGTACATGCCTAGCTGGCACAATACTCTAAACCCTATTCCCAATGAGAACTGTAATACAGGGGCTGCCCTCTCCCTTGCAAACCAGTTTTTTGTTTGTTTCTGACCCTAGAGGATCTCTGCCCCCATTGTCTGTGCGGCTTTCGTACAAATAACCAGGATACATTTGTGCATTTACATATGATCCAGGACCTTTTCATCTAGCAATACCCCTCTACTTCCTTGCAATAACTGTTGCACCATTCACTAAAATTAAAGCCTTCCTCTCAGTATACAGACTAAAAACCTTTCTGAGTCTGAGAGAGCTCTTGAGCTGTTCCCTGCAGCCACCCGCAAATTGCCCAGTCCTCTTACCTGACTCACTCCTTTCTTCCCCTTTTCTCCAAAACTCCCCCCAACACCACATCTTCCCTTAGCCTATACTTTACCTACAGTTTGTCGGCAAAGACAGACTAGCTATGGATCACAAGATAAGTAACAGACTGATCTCCATCTATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACCACCATACAAGGCAAGGAGAGATCTAAGTAGCCATACTTAAGATTGGTAAAGCGAAAGCCATCAGATCACTCAAGCGGTTTTGCAGCCTTGGCTGGCATCATAATACTTTTCAGGGCTACGTTGAGACCACAAAGTTCAGCCCTACTCCAAAAAAACTGCTCTCAGTGAAGCATTGTTCTTTCATCTGTAGGGCTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAAAAAGACGGTGTTGACTTTGGCAAATGGCGCGCGGTGCTGAAGATCACCAGCACAACTCCCTCTCAGCTCGCCATCCAGGAGAATGCTAACACACTAGCACGCTATGCCAGCATCTGCCAGCAGGTATCTGCCCTCCACTAATCTTTCTTGAGATGTTGTTACCCTTTATCTCTGCTCCTGTGATAACAGCTAGATATCTTGAAAGACTGCTTACTGTGACGGGTTTCAAAAACGATGAGGAAGAGGGGCTGTACAGCAAGAAGGAATACTATCAATGAAGGGGATAGACAGCAATGACAGGTTTTTTTTTTTTTTTCCACATCTGCAAAGACTTTCCTGGTTTTCTTTCCTTAGCACGGATTGGTGCCCATTGTGGAACCAGAAATCTTGCCTGATGGAGACCACGATCTCCAGCGCTGTCAGTATGTCACAGAAAAGGTAAGAGATCCTCACCTCTTCAAAAATCAGTGGTTAACCTTGTGCAGAGTTTGCATTCCTAGATTTCAGGGAGTTTTGAACAAGAAAGTACTTCATGACTGTGCCACAGAAATGAGTTACTCACATATAATGATTTAATAGCAAACTTGAGACTAGAATCCATGCGTTTGGATGTCCATTCAAACTTCCGTTAGAAGCATTCTCCATCGCAGAAGGATTCACTGGGGGTAAAAGTATGTACCTCTCTTTTGGTGTCCCTGTGAACAGGGACAAATCCAATAAACATAAAGAGTAGTATCTTAGTCATTCCGATAGCAGACTGTCTCTCAGGTTGCATTACTGACCCCCGTGATAAAGGTCAAGAGAAAGGGAAGTTCAGTTTTATCTTCATTCCACAACAGACTGAGGACACTGTTGAAGAATCTGTGGGTGTGAATTAGATGGGTCTCAGCGTGTGAAGATCTGAGCATAGGTCTGCATTTCATCCTTCTGTTCTCAGGTTCTGGCTGCTGTCTACAAGGCTTTGAATGATCATCACGTCTACTTGGAAGGGACACTGCTGAAACCCAATATGGTGACGGCTGGGCATTCCTGCCCCAAGAAGTACACCCCTCAAGATGTAGCCATAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTCCCTGGTGATTCCCAGTTTATTACTATGTATCCATTACTATGTCTCAGTCCTTCACATTGTCACTCTCACTGGCCTTGCTCCTACGTATGATACCCTCACTCATCTGGCACACGAGGGTCAGAGACTGTGGTGGCTGCAGCACTCAGCTTCTAAGCCTTATTTTCCCCTCACTGTAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACCTGAATGCCATGAAC +>Crypturellus +GATCTAGTGCAGAGTTTGCATTCACAGATCTTATCGGGTTTTAACCAACAAAATACTTTATAACTAAACCACAGAAGTGACATGCTTACAAATGATTTANCAGAAACCAAGAGACTAGAATTTTAGCTGTTTGTCTTTTGGATGCCAAATTGAATCAGTTAAAAGCATCTCACAAAGATTAATGGGGAGTAAAATTATCTACCTCTTCCTCTGTATCCCTGTCCACAAAGAAATCCAAGAAACATACAGAGTATCTTAGCCATGCCAAAAGCAGTAGTATCTCCAGGGCTGCACTAGTGACCCCTGTGATAAACTTCAGGAAAAAGGGAAGTTGTTTGATCTTCTCTCCACACTCTCAAGCAATATGCTGTCTTTCCACAACAGGCTGAGCACACTGCATGTGAGAATTAGATGAGCCTCAGATGTCAAGATTTCTGAGGCATGGGTGGGAGATCTGAAATCTGAGCATACTGAGATCATGAGTCTATATTTAATCTTCCTGTTTTCAGGTTTTGGCTGCTGTCTACAAGGCCTTGAATGATCACCATGTCTACTTGGAAGGGACACTGCTGAAACCAAACATGGTGACAGCTGGGCATTCCTGCCCCAAGAAATACACCCCTCAGGATGTAGCAGTAGCAACTGTCACTACTCTCCTGCGTACTGTTCCTGCTGCTGTGCCTGGTGATTCCCTCTGTATTACTATATAGCCATTACTATGTATCAAACCATCACACTATCACTCTCACTGGCCTCGCTCCTAGCTCCTAAACTCACTGCTCTAGCACGTAAGGGTCAGGGGCTGTGGTGGCTGCAGCACTCAGCTTCTACCCTTTGCTATTGCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACTTAAATGCCATGAAT +>Eudromia +AAAAAGGCATTGTGGTGGGAATAAAGGTGGGTATCTATACATGTCTGGCTGTCAAAATACTCTGAGCCCTGTTTCCAATGAGAACTATAACACAGGTGCCACATGCTTCTCGGCAAAACATTTTTCCATGTTTTTTAAAAAATCTAGATCTGTCCCCATTCTTTGTACAGCTTTTGAAGAAATAAGCAGGAAATATTTGTACATTTATATACGATCCAGCACCTTTTCATCCCGCACTACTTCCTTGTAACAAATGTTGCAACATTCACTGATACCAAACCTCTTCTGTCAGTACACAAATTAAAATTCTTTCAGAGGCTGACAGAACTCTTGAACTGTTCCCTTCAGCCACCTGTGTATTGCCCAATCCTCTTTTTCAGTGAACTCCTTTCTTCCCTTTTACTTCAACACATTTTAGCTATCTCCCCTTAAACTGTTCAGTCTCATACTTTACCTATAGTTGGTCTGCAAAGACAGACTAGCCATGGGTCACAGGATAAGTAACAGATTGATCTCCATCTATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACGACCATACAAGGCAAGAAGAGATCTAAATATGATCATGATTGGTAAAATGAAAGCCCTCCCCATAAAGAACTGCTTGCAGTGAAGCACTGTTCTTTCATCTACAGGGCTGGATGGACTGGCTGAGCGCTGCGCCCAGTACAAGAAAGATGGTGCTGACTTTGGCAAGTGGCGGGCAGTGCTGAAGATCACCAGTACAACTCCATCTCAGCTCGCTATCCAGGAGAATGCTAACACACTTGCACGCTATGCCAGCATCTGCCAGCAGGTATGTACTGTCCATAAGTCTTTCTTGAGATGCTGCTAACCATTTCTCATTGTTTCCTCCAAAGAAGAGCAAGAATGAGCAGCCAGACTGCAATCAGGATACTATCAGTGTGAGCAGGTTTTTTTTCCACATCAGCAAAGATTTTTCTGTTTTTCTTTCCTTAGCATGGGTTGGTGCCCATTGTAGAACCAGAAATCTTGCCTGATGGAGACCATGATCTCCAGCGTTGTCAGTATGTGACAGAAAAGGTAAGCCACCTTACTACGCTCCTCCCACAAAATCAGTCATTTATCTAGTGTAGAGTTTGCATTCACAGGTCTTAGAAGGGTTTGACCAAAAAAATACTTCCTCACTGCAACGCAGAAATGAGACACTCACAAATGATGATTTCATAAAAAAAAAAAAAAAAAAAAAAAGACTAGCATTCTAGTTTCATGTCCTCTGGATGCCAATTGAATCTCTGTTAGAGGCATCTCAAAAGATTCATGGGAAGTAAAATTATCTACCTTTTCTCTGTACCCGTATTCATCAAATCCAAGAAATATAAAGAGTAACTTAGTCATCCCAAAAGCAGTAGTATTTCCAGGGCTGCACTAGTGCCCTCTGATAAACTTCAGGAGAAAGAGAAGTTCCGTTTGATCTTCTCTCCACAACCTCAGCAATAATTCCACAATAGGCTGAGCACACTGCAGGTGAGAATTAGATGAGTCTCAGTATGTGAAGATCTCTGAGGCATGGGTCAGAGATCTGATATCTGAGCATATTGATATCATGGGTCTATATTTAATTCCCCTGTTCTCAGGTTCTGGCTGCTGTATACAAGGCCTTGAATGATCACCATGTCTACTTGGAAGGGACACTGCTGAAACCCAACATGGTAACAGCTGGACATTCCTGCCCGAAGAAGTACACCCCTCAGGATGTAGCCATAGCAACTGTCACTACTCTCCTGCGTACTGTTCCTGCTGCTGTGCCCGGTGATTACCAGTTTATTACTATGTATTGTGTACTATCTATGTATCAAACCATCACACTCTCAGTCTCATTGGCCATGCTCCTAAACTCATTGTTCTGGCACATAAGGATCAGGGGCTGTGATAGCTGCAGCACTCAGCGTCTTCCCTTTCTTATTGCAGGTATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACCTAAATGCCATGAAT +>Nothoprocta +AAAAAGGCATTGTGGTGGGAATAAAGGTGGGTATCTGTATTTATCTAGTTGTCATAATATTCTAAGCCCTATTTCCAATGAGAACTGTAATACAGGGGCTGCACTCTTCGCTGCAAAATATTTTTCCTTGTTTTTTAGAAAGCGTTGAGATCTCTGTCCTCATTCTCTGTACAGCTTTTGAAAAAAAATAAGCAGGACACATTTGTACATGATCCAGCACCTTTTCATCCAACACTACTTCCTTGGAGCAAATGTTGCAACATTCACTGATACCAAACCTCTCATCTCAGTACACAAATTAAAATCCTTTCAGAGGCTGACAGAACTCTTGAGCTGTTCACTTCAGTCATCTGTGTATTGCTCAGTCGTATTTCCCAGTGAACTCCTTTCTTCCCCTTCAGCACATTTCAGCTATCTCTCCTTAGCCTGTTCAGTCCCGTACTTTACTTATAGTTTGTCTGCAAAGACAGAATAGCCATGGGTCACAAGATAAGTAACAGACTGATCTCTATCTATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCCCTAGCAGGAACAAATGGAGAAACCACCATACAAGGCAAGGAAAGATCTAAGTATGATTATGATTGACAAAGTGAAAGCCATCAGATGACCACAGCCTAAGCTGGTGTCATGATACTTCTAGGACTGTGCTGAGAACACAAAGTTGAGGCCTACCTATAAGGAACTGCTTTCAGTGAAGCACTGTTCTTTCATCTGCAGGGCTGGATGGACTAGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGGGCTGACTTTGGCAAGTGGCGGGCAGTGCTGAAGATTACCAGCACAACTCCCTCTCAGCTTGCTATCCAGGAGAATGCTAACACACTTGCACGCTATGCCAGCATCTGCCAGCAGGTATCTACCCTCCACTAGTCTTTCTTGAGATGCTGTTACTAGTTCTTAACTATTTCCTGTGATAGCAACTACATCTCCGTAAGCAGTTTAAAAAACAACAACAAAAAAGCAGCTAGACTGCAACTAGCATACTATAATTGCTGGGGGTGTCGGCAAAGATTTTTCTTTTTTTCTTTCCTTAGCATGGGTTGGTGCCCATTGTAGAACCAGAAATCTTGCCTGATGGAGACCATGATCTCCAGCGTTGTCAGTACGTGACAGAAAAGGTAAGTTACCCATGCTATGTGCCTCATCAAAAATCAGTGATTAGTGCAGAGTTTACATTCACAGATAATCAGGGGAGTTTAACCAAGAAAATACTTGGTAACTTTATCACAGAAATGAGATGCTCATATATGATGATTTATTGGAAAACAAGAGACCAGAATCTAGTCTCTTGTCTTTTACATGCCAAATTGAATATCTGTTAGAAGCATCTCACAAAGATTCATGGGGAGTAAAATTGCCTGTTCTTCTGTAACCCTGTTCACAAATCCGAGAAAGATAAAGAGTACCTTAGTCATTCCCAAAGCAGTAGTATCTCCAAGGCTGTAGTAGTGACCCCAGTGACAAACTTCATGAGAAAAAAAAGCTCAATTTCATACTCTCCATACTTTTCTCCATACCGTCAAGAAATAAGCTATTTTTCCACAATAGGCTGAGCACACTGCAGGTGAGAATTAGATGAGTCTCAGTATGGAAAATCTCCGAGGTATGAGTCAGAGATCTGAAATTTGAGCATACTGAGATCATGGGTCTATATTTAATCCTCTTGTTCTCAGGTTCTGGCTGCAGTCTACAAGGCCTTGAATGATCATCATGTCTACTTGGAAGGAACACTGCTGAAACCCAACATGGTGACAGCTGGGCATTCCTGCCCCAAGAAGTATACCCCTCAGGATGTTGCCGTAGCAACTGTCACTACTCTCCTGCGTACTGTTCCTGCGGCTGTGCCTGGTGATTCCTAATTTATTACTATGTACCCATTACTTTGTGTCAAACCATCACACTGTCACTGTCACTGGCCTTGCTCCTAAACTCATTGCTCTGGCAGATAAAAGTCAGTGGCAATGGTGGCTGCAGCACTCAGCTTCTTCCCTTCCTTACTGCAGGAATCTGCTTCCTGTCTGGAGGTCAAAACGAAGAGGAGGA +>Tinamus +AAAAAGGCATTGTGGTGGGAATAAAGGTGGGTATCTATATGTGTCTGGCTGTCACAATTCTCGAAGCCCTGTTTCCAATGAGAATTATAATACAGGGGCTGCACTCTTCCCTGCAAAACCTTTTTCCTTTTTTTTTTTTAATAGAGGATCTCTGTCCTCATTCTCTGTATAGCTTTTGAAGAAATAAGCAGGACAGATTTGTACATTTATATATGATCCAGAACCTTTTCATCCAGCACTACTTCCTTGCAACAAATGTTATATCATTCACTAACACCAAACCTCTTCTCTCAGTACACAAATTAAAATCCTTTCAGAGATTGGCAGAACTCTTGAGCTGTTCCCTTTGTTCCCTTCAGCCACCTGCGTACGGCCAAGTCCTCTTTCTGAGTTCACTCTTTTCTTCTCCTTTGCTTCAACACATTTTGGCTATCTCCCCTTAGCTTGTTCAGTCCCATACCTTACCTATAGTTTGTCTGCAAAGACAGACCAGCCACGAGTCACAAGATAAGTAACAGACTGATCTCCATCCATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCCCTAGCAGGAACAAATGGAGAAACCACCATACAAGGCAAGGAGAGATCTAAATGTGATTATGATTGGTAAAGTGAAAGCTACCAGATGATCTGATCGCAGCCTTAGCTGGGGCCATGATAGTTTTGGTACTGTGTTGAGAACACAAAGTTGAGCCCTACCCATAAAGATTCTTTTATCTGCAGGGCTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGACGGTGCTGACTTTGGCAAGTGGCGGGCAGTGCTGAAGATTACCAGCACAACTCCGTCTCAGCTTGCTATCCAGGAGAATGCTAACACACTTGCACGCTATGCCAGCATCTGCCAGCAGGTATCTACCCTCCACTAGCCTTTATTGAGATGCTGTTACGAGTTCTCACTGTTTCCTGTGATAGCAACTATATCTCTGTAAGCAGATTAAAAAATAATAAGAAAGAGCAGCCAGACTGCAATCAGGACACTATCAGTGTTGGGTTGGGCAGTTTTGTTTCCACACCAGCAAAGATTTTTCCGTTTTCTTTCCTTAGCATGGGTTGGTGCCCATTGTAGAACCAGAAATCTTGCCTGACGGAGACCATGATCTCCAGCGTTGTCAGTATGTGACAGAAAAGGTAAGCTATCCTTGCTATGCCCCTCTTCAAAAATCACTGATTGTCTAGTGCAGAGTTTGCATTCACAAATCTTATGGGGTTTTGACCAAAAAAATACTTCGTAACTACACTGTAGAAATGAGATGTCACAAATGATGATTTAATAGAAAATAAGAGTTTTAGAAAACAAGAGAAATTTAGTCGCTTGTCATTTGGATGCCAAATCGAATCTCTGTTACAAGCATCTCACAAAGGTTAATGGGGGGTAAAAATATCTACCTCTTATTCTGTACCCATGTCCACAAATAAATCCAAGAAACATAAAGAGTATCTTAGTCATGCCAAAAGCAGTAGTATCTCCAGGGCTGCACTCGCCACCGCTGTGCTAAACTTCAAGAGAAAGGGAAGTTCAGTTTGATCTTCTCTCCGCTCCCTCAAGCAATAAGCTGTCTTTTCACAATAGGCTGAGCACACTGCATGTGAGAATTAGGTGAGTCTCAGTATGTCAAGACCTCAGAGGCATGGGTGAGGAATGTGAAATCTCAGCATACTGTGATCATGGGTCTATATTAATCCTCCTGTTCTCAGGTTCTGGCTGCTGTCTACAAGGCCTTGAATGATCACCATGTCTACTTGGAAGGGACACTGCTGAAACCGAACATGGTGACAGCTGGGCATTCCTGTCCCAAGAAATACACACCTCAGGATGTAGCTGTAGCAACTGTCACTACTCTCCTGCGTACTGTTCCTGCTGCTGTGCCTGGTGATTCCCAATTTATTTCTATGTACCCATTACTATGTATCACACTGTCATTCTCACTGGCCTTGCTCCTGAACTCATTGCTCTAGCACATAAGGGTCAGGGGCTATGGTGGCTGCAGCACTCAGCTTCTTTTCTTCCGTATTGCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACTTAAATGCCATGAAT +>Anas +AAAAAGGCATTGTGGTGGGAATAAAAGTGAGTATCTGTACATGTGTGGGGTCTATACTCACTCCCAACAACAACTTTTGTTTGTTTTTTTTCGGTTTTGAAATCCCTAGAATGTCTCTGCTACCATTCTCTGCATTGCTTTTGTACAACTAAACAGTGAAACATTTGCAACCGATGCAGGACCCTTTTGTCCAACAGCACCCATATATTTACCATTCACTGCAGTTACATCCTTCCATGCAATAACCTAATTAAATCCTTTCTGCAGCTGACAGAGCTGTTGATCTACTCCCCACAGCCACCTGCATATTGCCCCCATGACCCAATTCTCTCCTGTTCCTCCCCTTTACTGGAGCCCTTCCCTTCCTTCCACTAGCAGTCTGTTCAGCCCTATACTTTACTCACAGTTAATCTGCAAAGGTAGACTAGCTCTGGGGTGCAAGGCTCAGGCTGACCTCCCTCACTCTGTAACTCTTTCTGTTTCTGCTGTCTCTTCAGCTGGATAAAGGCACATCGCCCCTAGCAGGAACAAATGGAGAAACCACCATCGAAGGTAAGGAGAGATCTAAGAAGCCTTAGCTATGACTAGTGAAAGTCATGGGGTGACTCAACAGGAGTTGCAGCCTTGGCTGGTGTCATGGTACTTTTCAGAGTTATTTCTGAAAGAGCTGTTCTCACTGAAGCTCTGTTCTTTCACATGCAGGACTGGATGGACTGTCTGAGCGCTGCGCCCAGTACAAGAAAGATGGTGTTGACTTTGGCAAGTGGCGTGCAGTGTTGAAGATCACCAGCACAACACCCTCTCAACTTGCCATCCAAGAGAATGCCAACACACTGGCACGCTATGCCAGCATCTGCCAGCAGGTATCTACCCTTCTGCAGCCTTCCTTGAGATGTTTTCGTCCCTTTTTCACTGTTCCCTCTGATAATAGACTAGGTATTGTGAACAGTGGATCTCTGTGAGGGTCTTGGGAAATGTGGAGAAAGGGCAGTGCAGAAAGAAGGCATGTCACCAGAGACAATACAGACAGCCAGGACAGTTTTTCTTTCCCACCTCCAAAAACTTCCTTGTTTTTCCTTCCTTAGAATGGCTTGGTGCCCATTGTGGAGCCAGAAGTCTTACCTGATGGAGACCACGATCTCCAGCGCTGCCAGTATGTCACAGAAAAGGTAAGATTCTTGATCTCTGCACCCTCACAAATCAGTAGTTAATCTTATGCAGGGTTTGCATTGACAGATTTCAATGAGTTTTGACCAAAAAGGTCCTTCATAACTGTATCACAGAAATGGGTCACTCATAGTCAAATAATTAGCTAGTAGCAAATGTGAGAGCAGAATCCCTGTTTTTGGATTTCCAGTCAAACTGTCAATATAAGCATTCCTGAGCTGAAAAGGATACATTGGTTATAAAGGCATTTATTCCTTGTTCAGTATGTCAGTTTGTAAGGACAAATCCAATAAAAAAGGAAAATGTCCTAGTCATCACAAAAGCATCGGTGCCTCCAGGGCTGCAACCCCTGTGACAAATTTCAAGAAATTTAGTTTGATCTTCTCCCACTTCCAAGGAATTAGCTGTCTCTCCACAGTAGGCTGAGGTAAAGCATTGAGCACAGATGTGTATTCAATCCTCCTATTCGCTCCCCCAGGTTCTGGCTGCTGTCTACAAGGCCTTGAACGATCATCATGTCTACCTGGAGGGGACATTGCTGAAACCCAACATGGTGACAGCCGGGCATGCCTGCACCAAAAAATACACCCCTCAGGATGTAGCTGCAGCAACCGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTTCCTGGTGATTCTTGATTTGTTCCCATATATCCCTTCACACTGTCACTCCTACTGGCCTTGCTCCTCCATCTGACATGCTCATTTCTCTGGCACACAGAGGTCAGAGATGGTGGCTTGGCGGCTGGAGCGCCCCAGTTTCTAAGTCCTGAGGTCTCTTTCTTTCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACCTGAATGCTATGAAT +>Gallus +AAAAAGGCATGGTGGTGGGAATAAAGGTGAGTTATATCCTTCCATGCCAACAGAACTCTTGAGCCATTCCCCACAGCCAAATCCATATTGCCCTTTATATCCAATTCAATTCTGTTCTCCCCCTTTTCCTGCACTTCTTACCTTCCTTACACAAGTAGTATGTTCAGCCCCATATTTCACTCACGGACAATGTGCAAGGGTAGACCAGCTCTGGGTCACTTCTGTCATTTTTTAACCCTTTCTATTTTTGCTGTCTCTTCAGCTGGATGCAGGTACTGCACCTCTGGCAGGAACAAATGGAGAAACCACTATCCAAGGTAAGGTGAGATCTAAGAAGCCTCAGTTGTGAGTGATACATTGAAAGCCATGGTGTGACTCAACAGGAGATGAAGCCATGGCTGGTGTCATGGCACATTTCAGAGCTGTATCCTATCCTCTCAGTGAAGCACTGTTCTTTCATCTGCAGGACTTGATAAACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGCTGACTTTGGCAAGTGGCGTGCAGTGTTGAAGATCAGTAGCACAACGCCCTCTCAACTTGCCATCCAAGAGAACGCCAACACCTTGGCACGTTACGCCAGCATCTGCCAGCAGGTATCTACCCTCCAGCAAAATTTCTGGAGATTCTGTCGCCCCTTCCTTGCTGTTCCCTGTGATAACAGATGAGATATCTTGAAAGGCAGATCTCTGTGAGGATTTTGGGAAAGATGAGGATGAAGGGCAGTACAGAAGAAGAAATACCACCAAACACAATATAGACAGCAAGTAGAGTTTTTTTCTTCCACAATGATGTGTGGAAATCAGGCCCTATAGCCAGTAAGGATATAGAGCAGGTATGTGTTTATTGGTGACGCGCGTACACCCTGGTGCAAGGGGGATCGTTCCACTTAACTTGCACACCATCTGAAGAAATCGTGCTATAGATATAGGTGAAACTAATACATAATCAGTAGTTGACAAGAATTCGGATACATATTCACTAAATTTCCGAGAGCTCATTAGCATACAGTGCCTCCCCCCCTTGCACGTGCATAGTAGGTCGTGATGATGAAGGCTCGTAGTCTTCCTCGTGAAGGCTCATAGTCTTCCTCGCTGCAAACTTCTGACCCTGAAGGGGGGGCATCCCCCGAACTGGTTTCAGCTTGCACTTCAGACATCTAATCACCTCCCTGCCAAATGTTTTCGAGCTGTTCTCCGGTCCTTATCTTTATGGCCTTCATTCTCCTTGTTATTCTGGACCTAGCGCCTGTGAAAGTGCTTGGAATCCCTTGTTTTCTAATACTCTCTACATTAACTATCTCTATTTGCCCTTTATGTCTACCTTGTGAAGCTGCTTTCTCTTTTCTTGCTATGAAGCCCTTCTTTCCATACTGCAGGGACCTGATTTTGCCCTTCAACACTTACAAAGACTGCCTTGTTTTTCCTTCGTTAGAATGGCTTGGTGCCCATTGTGGAGCCAGAAGTCTTACCTGATGGTGACCATGATCTCCAACGCTGTCAGTATGTCACAGAAAAGGTAAGAGATTCCTTATTCTCTCCTCACCTTCACAAATCACTAGTTAATCTTATGCAGAGTTTATACTGCTCTCAAGGATTTTTAAACAATAAGTTCCTTCAAAACTGCACCACATGAATTCACAGTCAAATAATTAGCAAAAAGCAAACCTGCAAGTAGAATTCATGATTTTGGATTTCCATTCAAACTCTCAATATAAACATTCTTGACCTCAAAAAGATACACTGCAGATAAAGACCTTTACTCTTTATTCAGTACCTCAGTTGCAGGGAATACCCTTGCCAAAAAGAAAAGTGGTATTCTGGTATTACTAAAGTTCTCCAGGGCTCTCTTGGTCTGCACCTCCTGTAATAAATTCTAAGAGAAAGTGAAATGTGATTTGATCTTCTCACACTCCCAATGAATAAGTTGTCTTTCCACAGGAGGTTGAGGTAAAGATTTGAGCACAGATCTGTATTCACTCCTCCTTTTCAATCCTTAGGTTCTGGCTGCTGTCTACAAGGCCTTGAATGACCATCATGTCTACCTGGAAGGAACACTGCTGAAACCCAACATGGTGACAGCTGGGCATTCCTGCCCCAAGAAGTACACCCCTCAGGATGTGGCTGTAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTTCCTGGTGATTCTTGATTCATTCCTATTATAACCATTCAGTTTCACTGGACTTGCTCCTACATCTGATATGCTGACTTCTCTGTCACAGTCAGTAACTGTGGCAGCTGGAGCAACCTATTTCTAAGTCTTGAGGACTCTGTCTTTCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAATTTGAATGCCATGAAT +>Buteo +AAAAAGGCATTGTGGTGGGAATAAAGGTGAGTATCTGCAGATGTCTGGATGGCAGCATAATCTAAAACCCATTACCAGTGAAAATTATATATGGGGCTGCACTCTCTCCTGCCAAACACCTTTTTTCTTTTTTGTGCTTGGTTTTAAAATAACTAGAGGATCTCTGCCACCATTCTCTGCATTGCTTTTGTACAACTAACCAGGAGCACATTTGCATTTAGTGCAGGAACTTTGCATTCACCAACTCGCACCTACTCACCGTTTGCTGCAATTAAATCCCTCCATGCAGTAACCTAAATCCAGTCCTTTCTGCATCTGATAGAGCTCTCGAGCCATTCCCTATGGCCATCTACACATTGTCCCTTCCTCTTGACCAATTCACTCCTCTGCCTCCCCTTTGCTCCAACATTTCCCTCGTTTGCACCCTTAGCATGTTCAGCACCATGCTTCACTCACAGTCAGCCTGCAGCGACAGACTAGCCATGGGTAAGAAGGCTGATCTCTATCTTTCTGTAACCCTTCCTGTTTTCCTCATCTCCACAGTTGGATAAAGGCACAGCACCCCTAGCAGGAACAAATGGAGAAACCACCATCCAAGGTAAGGAGAGATCTAAGGAGCCTAAGTTATGACTGGTGGAACAAAAGCCATGGGGTGGCTACCCTGAGTCGCAGCCTGGGCTGGTGTCATGGTACTTTCAGAGCTATATCCTAAAGAACTGCTCTCAGTGAAGCACTGTTCTATCATCTGCAGGGCTGGATGGATTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGCTGACTTTGGCAAGTGGCGTGCAGTGCTGAAGATCACTAGCACAACACCCTCTCAACTTGCCATCCAAGAGAATGCCAACACATTGGCACGCTATGCCAGCATCTGCCAGCAGGTATCTACCTTTCCTGAGATGCTGTTGCCCCTTCTCACTGTTCTCTGTGATAACATGATAGGTAACTTGAAAGGCAGATCTCTGTGAGGCTTTTGGGAAAGATGAGGTAGAAGGGCAGTGCAGCAAGAACGAATACCACCAGTCAGGGTAGACAAGAACAGTTTTTCTTCCACATCCCTAGTGACTTCCCTGTTTTTCTTTCCTTAGCATGGCTTGGTGCCCATTGTGGAGCCGGAAATCTTGCCTGATGGAGACCATGATCTCCAACGCTGTCAGTATGTCACAGAAAAGGTAAGAGATTCCTGCCCCTCTCCTCCCCTTCACAGATCAGTAGCTGATCTTATTCAGTTTGTACTCACACATCTCAAGGAGTTTTGACCAAAAAGGTACTTCGTAACTGCATCACAAAAATGAGTTGCTCACAGTTAATAGTGAATGCGAGAGTAGAATCCATGCTTTTGGATTTCCACTCGAACCACCTATATAAGCATTCTCAATCTCAAAAAGATGCACAGGGACCAAACCCACTGACCACTCTTTCAGTACCTCAGCTTGCAGGGACAAGTTCAGTAAATATGAAGAGTGGTATCCTGGTCATCTCAAAAGCAGTGGTGTCTCCAGGGCTGCAACCCCTGTGATAAATTTCATGAGAAAGCAAAATTCAATTTGATCTTCTCACACTCCCAAGGAATGAGCTGTCTTTCCACAGAAGGTTGAAGTGAAGATTTGAGCAGAGATCTACATTCGCTCCTCCTGTTTTCAGGTTCTTGCTGCTGTCTACAAGGCCCTGAATGATCATCATGTCTACCTGGAAGGGACACTGCTGAAACCCAACATGGTGACAGCTGGGCACTCCTGCCCCAAGAAGTACACCCCTCAGGATGTAGCCATAGCAACTGTCACTACTCTTCTCCGCACCGTTCCTGCTGCCGTTCCCGGTGACTCCCAGTTCATTCCTATGTATCCATTCACACTGTCACTCTTGCTGGCCTTGCTCCTACATCTGACATGCTCACTCCTCTGGCACATAAAGGTCAGGGATTGCGGTGGCTGAAGCACTTAAGCCTCGAAACCTTTTTCTTGCAGGAATCTGCTTCCTGTCTGGAGGTCAGAGTGAAGAGGAGGCTTCTGTCAACCTGAATGCCATGAAT +>Ciconia +AAAAAGGCATTGTGGTGGGAATAAAAGTGAGTATCTGTACACGTGTGGCAGGCAGCATACTCCAAACCCCGTTTCCAGTGAAAATTATATATGGGGCTGCACTCTCTCCTGCCAAACACTTTTTTTTCTTTTTTTGTGCTTGATTTTAAAATCCCTAGAGGATCTCTGCCACCATTCTATGCATTGCTTTTGTACAACTAACCAGGGGCACATTTGCATTTGATGTAGGAACTTTTCATTCACCAACTCCCATCTACTCACCATTCACTGCAATTAAATCCCTCCATGCAGTAACCTAAATCCAGTCCTTTCAGCATCTGACAGAGCTCTTGAACCATTCCCTGCAGCCTTCTACACATTGCCCCTTCCTCTTACCCAGTTCACTCCTTTTCTTCCCCTTTGCTCCAGCGTTTCCCTCCTTTGCACCCTTAGTGTGTTCAGCCCCATACGTTACTCACAATCAGCCTGCAAAGACAGACTAGCCATGGGTAAGAAGATAAGGATGACACTGATCTCCATCTCTCTGTAACCGTTCCTGTTTTTCGGGTCTCCACAGCTGGATAAAGGCACAGCACCCCTAGCAGGAACAAATGGAGAAACCACCATTCAAGGTAAGGAGAGATCTAAGGAACCTAAGCTATGACTGGTGCAGCAAAAGCCAAGGGGTGACTCGCCTGAGTCACAGCCTTGGCTGGTGTCACGGTACTTTTCAGAGCTATGTCCTGAAGAACTGCTCTCAGTGAAGCACTGTTCTTTCATCTGCAGGGCTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGACGGTGCTGACTTTGGCAAGTGGCGTGCAGTGCTAAAGATCACCAGCACAACACCCTCTCAACTCGCCATCCAAGAGAATGCCAACACATTGGCACGCTATGCCAGCATCTGCCAGCAGGTATCTACCCTCCAGCAACCCTTCCCGAGATGCTGTTGCCCGTTCTGACTGCTCCCTGTGATAACATGCTAGGTAACTTGAAAGGCGGATCTCTGCGAGGGTTTTGGGAAAGATGAGGAAGAAGGGCAGCGCAGCAAGAAGGAATACCAACAAAGTCAGGGTAGACAACAAGGACTGGTTTTCTTCCACGCTCTCCAAAACTTCCCTGTTTTTCTTTCCTTAGCATGGCTTGGTGCCCATTGTGGAACCAGAAATCTTGCCTGATGGAGACCATGATCTCCAGCGCTGTCAGTATGTCACAGAAAAGGTAAGAGATTCCTGCCCCCGTCCTCCCCTTCACAAATCAGTCGCTAATCTTATGCAGAGTTTGTGTTCACAGATCTCAGAGAGTTTTGACCAAAAATGTACTTCATAACTGCATCACAAAAATGAGTTGCTCATGGTCAAATAATGAATTAACAGCCAATGTGAGAGTAGAATCCATGCTTTTGGATTTCCACTCAAACTGCCAATATAAGCATTCTCAATCTCAAAAAGATGGATTGGGAGCAAAACCACTTACCCCTCTTTCAGTGCCTCAGTTTGCAGGGACAAATCCAGTAAATAGGAAGAGGGGTATCCTGGTCATCTCAAAAGCAGTGGTGTCTCCAGGGCTGCAACCCCTGGGATAAATTTCACAAGTTCAATTTGATCTTCTTACACTCCCAAGCAATAAGCTGTCTTTCCACAGCAGGTTGAGGTGAAGATTTCAGCAGAGGTCTGTATTCAATCCTTCTCTTTTCAGGTTCTGGCTGCTGTCTACAAGGCCTTGAATGATCATCATGTCTACCTGGAAGGCACACTGCTGAAACCCAACATGGTGACGGCTGGGCATTCCTGCCCCAAGAAGTACACCCCTCAGGATGTAGCCGTAGCAACTGTCACTACTCTTCTCCGTACCGTTCCTGCTGCTGTTCCCGGTGATTCCCAATTCATTCCTATGTATCCATTCACACTGTCACTCTTGCTGGCCTTGCTCCTACATCTAACACGCTCACTCCTCTGGCACGTAAAGGTCAGGGATTGCGGTGGCTGGAGCACTCTCTGAACCTCAAAACCTCTTTCTTGCAGGAATCTGCTTCCTGTCTGGAGGTCAGAGTGAAGAGGAGGCTTCTGTCAACCTGAATGCCATGAAT +>Corvus +CCATCCAAGGTAAGGAGAGATCTAAGGAGCCTAAGCTAAGGCCCAGCAAAAGCCATAGGGTGACTCACCTGAGACGCAGCCTTGGCTGGAGTCATGGGACTTTGCAGAGTTCTGTGCTGAAGAGCAGCTCTCAGTGAAGCACTGTTCTCCCTCTGCAGGGCTGGATGGGCTGGCTGAACGCTGTGCCCAGTACAAAAAAGATGGTGCTGACTTTGCTAAGTGGCGTGCAGTGCTGAAGATCACCAGCACAACACCCTCTCAGCTTGCCATCCAGGAGAACGCCAACACGTTGGCGCGCTATGCCAGCATCTGCCAGCAGGTACCTCCCCTCCAGCAACCTCTCCTGAGATGCTGCTGCCCCTTCTCACTGTTCCCTAGCATGTGATAACATGCTAGGTAGTTCGAAAGGAGAATCCCCGTGAGGGTTTTGGGGAAGACAAGGAGGAAGGGCAGTGCAGCATAAAGGAATGCCACTAAACTCAGGGCAAACAACAAGAACAGTTTTACTTCCATAGCTCTAAAGAATCCCCTGTCTTCCTTTTCCTAGCATGGCTTGGTGCCCATTGTGGAGCCAGAAATCCTGCCTGATGGAGACCATGATCTCCAGCGCTGTCAGTATGTCACAGAGAAGGTAAGAGATTCCTCCCTCTGTCCTCCCCCTCACAAATCAGCAGCTAAACTTTGTGCAGTTTGTGCTCACAGATCTCAAAGAAGTTTGACCAAAAATGTACTTCATAACTGCATCACAGAAATCAGCTGCTCCTAGGCAAATAGCAAACTAATAGAAAATCCACGAGTATTTTCCATGTGTTTGGATTTTTATTTCAATGGCAATATAAGCACTCTCAATCTCAAGAAGAGGTATCAGGACCAAACCCAATTACCTCAATTTCAGTACCTCAGTTGGCAAGGACAAATCCTGTAAATATGAACAATTGTATTATTGGTCATCTCAAAAGCAGTGGGGTCTCCACAACTGCAATCCCRGAGATAAATTTCATGAGAAAGCAAAATTCAACTAGATCTTGCTGCAGTACCAAAGAATAAACTGTCTTTCCACAGCAGGCTGAGGTGAAGATCTGAGCAGAGGTCTGTATTCATTCCTCCTGTTTTCAAGGTTCTGGCTGCTGTCTACAAGGCTTTGAATGATCACCACGTGTACCTGGAAGGGACACTGCTGAAACCCAACATGGTGACGGCTGGGCATTCCTGCTCCAAGAAGTACACCCCTCAGGATATAGCCATAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTTCCTGGTGATTCCTGATTCACTCCTRTCTCTTCATTCCCACTCTCTCTCCCACCTCTGACATGTCTGCTCCTCTGGCACCTAAAGGTGAGGGACTGAGGTAGCTGGAACACTCTGTTTCTAAGCCTTGAAACCTCTGTCTTACAGGAATCTGCTTCCTGTCTGGAGGTCAGAGTGAAGAGGAGGCTTCTGTCAACCTGAATGCCATGAAT +>Smithornis +AAAGGTGAGTATCTGTATTTGCCTGGCTGGCAGCATAATCCAAACTCCATTTTTCCAGAGAAAATTTATATGAGCCTGAAAAAACACTTTTTTGTTTGGTTTTTTTGTGCTTGGTTTTAAAATCACTAGAGGATATCTGCCACCATTTTCTGCATATTGCTTTTGGGCAACTAACCAGAGGCACATTTGCATTAAATGCAGGAACTAGCACAGATTTGGGAGTGTTGGTGGATAGGAAACTCAACATGAGCCAGCAGTGTGCCCAGGTGGCCAAGAAGGCCAATGGCATCCTGGCCTGCATCAGGAATGGTGTGCCCAGGGAGGTGGTGGAATCACCGTCCCTGGAGGTGTTTAAGAGTAGGCTGGATGAGGCACTGAGTGACATGGTTTAGATGATGGGATGGTGCTAGGTAATAGGTTGGACTTGGTGATCTCAAAGGTCTTTTCCAACCTTGTTGATTCTGTGATTCTCTGATTCTGTAACTTTTTATACACAAACTTCCACCTACTCACCATTCACTGCAAATAAGTCCCTCCATGCAGTAAATTAAATCAATTTATTTTCACAGTTGACAGAGGTCTCCAGCCACTCTTTGCAGTCATCTACACACAGCCCCTTCCTCTTACCCAGTTCACTCCTTTTCTTCCCCTTTGCCCCAACATTTCCCTCCTTTGTACCCTGAGCATGTTCAGCCCCATACTTACAATCAGCCTGCAAAGACAGACTAGACATAGATAAGAAGATAATACTGATTCCCACTCTCTGTAACCCTTCCTGTTTTTCTGTTCTCCACAGCTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACCACCATCCAAGGTAAGGAGAGATCCAAGGAGCCTAAGCTACAACCTGTGCAGCAAAAGCCATAGGGTGACTAACCCGAGTCGCAGTCTTGGCTGGTGCCACGGTACTTCCCAGAGCTTTGAGCTGAAGAACTGCTCTCAGTGGAGCACTGTCCTCTCCCTGCAGGGCTGGATGGGCTGGCTGAGCGCTGTGCCCAGTACAAGAAAGACGGTGCTGACTTTGGCAAGTGGCGCGCAGTGCTCAAGATCACCAGCACAACGCCCTCTCAACTCGCCATCCAAGAGAATGCCAACACCCTGGCACGCTATGCCAGCATCTGCCAGCAGGTACCCACCCTCCAGCAACCTTTCTTGAGATGCTGCTGCTCCTTCTCACTGTTTCCTGTGATAACACACTAAAAAGGAGGATCTCCGTGAGAGTTTTGGGGAAGACAAGGAGGAAGGGCAGCACATCAAGAAGAAATATCACCAAAATCAGGGTCAATGGCAATAACAGTTTTTCTTACATAGCCCTAAAGAATTCCCTGTCTTTCTTTTCTTAGCATGGTTTGGTGCCCATCGTGGAGCCAGAAATCTTGCCTGATGGAGATCATGACCTCCAGCGCTGTCAGTATGTCACAGAAAAGGTAAGAGATTCCTCTCTCTCTCCTTCCCTTTACARATTAGCAGCTAAACTTTCTGAAGTTTGTGCTCACAGATCTCAAGGAGATTTGACCAAAAAGGTACTTCATAACTGCTTCACAAAAATGAGCTGCTCACAGGCAAATAATGAGTTAATAGCAAATGCAAGAGTACAATCCATGGTCTTGGATTTCCACTCAAACTGACAATATAAGCATTCTCAACCTCAAAAAGGTGGATCAGGAGCAAAACCAATTACTTCAATTTCAGTACCTCAGTTTGCAGTGACAAATACAGTCAATAGGAAGAGTGGTATTCTGGTCATCTTAACAGCAGTGATGTCTCCACAACGCCTCTGAGATAATTTCACACATGAAAGCAAAATTCAGTTTGATCTTGTTCCACCCCCAAAGAATAAGCTGTCTTTCCACAGGAGGCTGATGTGAATACATGACGAGAAGTCTGTATTCAATCCTCCTGTTTTCAGGTTCTGGCTGCTGTCTACAAGGCACTGAATGATCATCATGTGTACCTGGAAGGGACACTGTTGAAACCAAACATGGTGACGCCTGGACATTCCTGCTCCAGGAAGTACAGCTCTCAGGACATAGCTGTAGCCACTGTCACTACTCTCCTTCGCACCGTTCCTGCTGCTGTCCCTGGTGATTCCTGATTCCCAATTCATGGGAATTGCTGGTCCTGCTCCTGCCTCTGACATGGCTGCTCCTCTGGCATGCACAGGTCAGGGGTTGGGGTGGCTGAAGCACTCCATTTCTAAGCCTCAAATCCTTTCTTGCAGGAATCTGCTTCCTGTCTGGAGGTCAGAGCGAAGAGGAGGCTTCTGTCAACCTGAACGCCATGAAC diff --git a/src/TEST/vcf_file b/src/TEST/vcf_file new file mode 100644 index 0000000..916899f --- /dev/null +++ b/src/TEST/vcf_file @@ -0,0 +1,83 @@ +##fileformat=VCFv4.1 +##contig= +##FORMAT= +#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT APC1 APC2 GPC1 GPC2 GPC3 GPCREF HH1 HH2 HH3 HH4 HH5 LPC1 LPC2 QHH1 QHH2 QHH3 QHH4 STG1 STG2 GNNSN +1 2 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 3 . A G . . . GT 0 1 1 1 0 1 0 0 0 0 0 1 1 0 1 0 1 1 1 1 +1 4 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 5 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 6 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 +1 9 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 +1 10 . A C . . . GT 0 0 1 1 1 1 1 1 1 1 1 0 0 1 1 1 1 1 1 1 +1 11 . T C . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 +1 12 . T C . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 +1 13 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 14 . T C . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 15 . C A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 16 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 17 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 20 . A T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 21 . T C . . . GT 0 0 1 1 1 1 0 0 0 1 0 1 1 1 1 0 1 1 1 1 +1 23 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 24 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 25 . T C . . . GT 0 0 0 1 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 0 +1 26 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 28 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 29 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 31 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 32 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 33 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 35 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 +1 37 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 38 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 39 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 +1 40 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 +1 41 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 42 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 43 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 +1 44 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 45 . C T . . . GT 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 1 0 0 +1 46 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 47 . T C . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 48 . T C . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 +1 51 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 +1 52 . T G . . . GT 0 1 1 0 0 0 1 1 1 0 1 0 1 0 1 1 1 0 0 0 +1 53 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 54 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 55 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 56 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 57 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 58 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 60 . T C . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 61 . A C . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 +1 63 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 65 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 66 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 67 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 +1 69 . C T . . . GT 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 +1 70 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 71 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 72 . T C . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 73 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 +1 74 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 75 . T C . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 76 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 77 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 79 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 80 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 81 . G T . . . GT 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 +1 82 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 83 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 84 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 85 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 86 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 +1 88 . G A . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 91 . T C . . . GT 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 +1 93 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +1 94 . G A . . . GT 0 1 1 1 0 0 1 1 1 1 1 1 1 1 0 1 1 1 1 0 +1 95 . A G . . . GT 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 +1 96 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +1 97 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 98 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 +1 99 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 +1 100 . C T . . . GT 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 diff --git a/src/TEST/yule_100taxa.tre b/src/TEST/yule_100taxa.tre new file mode 100644 index 0000000..6fe59c1 --- /dev/null +++ b/src/TEST/yule_100taxa.tre @@ -0,0 +1 @@ +(((((taxon_1:0.6982661782487307,taxon_2:0.6982661782487307):1.6249815565818162,((((taxon_3:1.312206397223513,((taxon_4:0.5760815262101513,taxon_5:0.5760815262101513):0.3800597625577158,(taxon_6:0.5784142495569773,((taxon_7:0.1013408642606795,taxon_8:0.1013408642606795):0.0180080170481407,taxon_9:0.1193488813088202):0.4590653682481571):0.3777270392108898):0.3560651084556459):0.3015487355203716,(taxon_10:0.119331262993442,taxon_11:0.119331262993442):1.4944238697504426):0.114414067646234,((taxon_12:1.042129626245301,((taxon_13:0.3231843744364307,taxon_14:0.3231843744364307):0.3630830459837346,taxon_15:0.6862674204201653):0.3558622058251357):0.033965211039515,taxon_16:1.076094837284816):0.6520743631053025):0.4425292521420627,((taxon_17:0.311799975030377,taxon_18:0.311799975030377):0.6851557909875696,((taxon_19:0.0799818354617869,taxon_20:0.0799818354617869):0.071310986598915,taxon_21:0.1512928220607019):0.8456629439572447):1.1737426865142346):0.1525492822983656):0.1729087371924658,taxon_22:2.4961564720230127):0.4728993649949182,((((taxon_23:0.3583995317552473,taxon_24:0.3583995317552473):0.7648238551093423,((taxon_25:0.5011856326323869,(taxon_26:0.0248901240195174,taxon_27:0.0248901240195174):0.4762955086128695):0.5125931002409674,(((taxon_28:0.3725923243960683,taxon_29:0.3725923243960683):0.0495327146718338,(taxon_30:0.0973334568622768,taxon_31:0.0973334568622768):0.3247915822056253):0.4217873265813239,((((taxon_32:0.089804301016561,taxon_33:0.089804301016561):0.1622736535184917,(taxon_34:0.0854779944389534,taxon_35:0.0854779944389534):0.1665999600960992):0.0740097392128209,(taxon_36:0.0088131835972796,taxon_37:0.0088131835972796):0.317274510150594):0.413608370114857,(taxon_38:0.4506500091522678,taxon_39:0.4506500091522678):0.2890460547104627):0.1042163017864954):0.1698663672241283):0.1094446539912353):0.1450118866055661,(taxon_40:0.7776768359705573,((taxon_41:0.208231047732685,(taxon_42:0.1354901837292877,(taxon_43:0.0817726067758073,taxon_44:0.0817726067758073):0.0537175769534803):0.0727408640033973):0.0962026632694082,taxon_45:0.3044337110020932):0.4732431249684641):0.4905584374995984):1.4448150307773564,((taxon_46:0.4878815683208897,(taxon_47:0.19161436302526,taxon_48:0.19161436302526):0.2962672052956297):0.2834052957414634,taxon_49:0.7712868640623531):1.9417634401851589):0.2560055327704189):2.0856420237227193,((((taxon_50:0.4300327915973226,taxon_51:0.4300327915973226):0.8969532453338611,(taxon_52:0.568578389427925,(taxon_53:0.1901867844114129,taxon_54:0.1901867844114129):0.3783916050165121):0.7584076475032586):0.0957604101295058,(taxon_55:1.333030563295464,taxon_56:1.333030563295464):0.0897158837652254):1.9006114748887064,((((taxon_57:1.5215922847946106,taxon_58:1.5215922847946106):0.3629256398116678,(((taxon_59:0.3287774057498947,taxon_60:0.3287774057498947):0.778047934593503,(taxon_61:0.9312398790523275,(taxon_62:0.1862099274523441,taxon_63:0.1862099274523441):0.7450299515999834):0.1755854612910701):0.4395266255043242,(taxon_64:1.5157765557746887,(taxon_65:0.3382093393346661,taxon_66:0.3382093393346661):1.1775672164400226):0.0305754100730331):0.3381659587585566):0.158441214773128,taxon_67:2.0429591393794064):0.6821756968121897,(((taxon_68:0.5813998986299325,taxon_69:0.5813998986299325):1.4790323777643182,((taxon_70:0.1761174296900734,taxon_71:0.1761174296900734):1.7187490334908082,((((taxon_72:0.4049442314233893,taxon_73:0.4049442314233893):0.1084215792456913,taxon_74:0.5133658106690806):0.2581008815398702,taxon_75:0.7714666922089508):0.7146531745199565,((taxon_76:0.182699621464824,taxon_77:0.182699621464824):0.4872594995170836,taxon_78:0.6699591209819076):0.8161607457469997):0.4087465964519743):0.1655658132133691):0.0613372838461452,((taxon_79:1.2053045938091311,((((taxon_80:0.1423167774958998,taxon_81:0.1423167774958998):0.1785248425729371,(taxon_82:0.0316995002500189,taxon_83:0.0316995002500189):0.289142119818818):0.4900281343229302,taxon_84:0.8108697543917671):0.2423451701550325,((taxon_85:0.4365585976233062,taxon_86:0.4365585976233062):0.5989741421624188,taxon_87:1.035532739785725):0.0176821847610746):0.1520896692623315):0.8985648856685668,(((taxon_88:0.2305834905611297,taxon_89:0.2305834905611297):1.5262685157149987,(((taxon_90:0.5584532975441237,(taxon_91:0.2718060672044986,(taxon_92:0.2158890655642036,taxon_93:0.2158890655642036):0.055917001640295):0.286647230339625):0.1590083230717578,taxon_94:0.7174616206158815):0.5376929005182145,(taxon_95:0.5548423513736935,taxon_96:0.5548423513736935):0.7003121697604024):0.5016974851420324):0.0402385025378456,(taxon_97:1.5057513411058525,(taxon_98:0.8681779379117796,(taxon_99:0.5807008789257022,taxon_100:0.5807008789257022):0.2874770589860773):0.637573403194073):0.2913391677081214):0.3067789706637241):0.0179000807626979):0.6033652759512003):0.5982230857577997):1.7313399387912545); diff --git a/src/TEST/yule_10taxa.trees b/src/TEST/yule_10taxa.trees new file mode 100644 index 0000000..de5984c --- /dev/null +++ b/src/TEST/yule_10taxa.trees @@ -0,0 +1,10 @@ +(((taxon_1:0.8907171433253214,(taxon_2:0.3792329207211909,taxon_3:0.3792329207211909):0.5114842226041305):0.5494272906771998,taxon_4:1.4401444340025211):1.0852085270004963,((taxon_5:0.2259573590217436,taxon_6:0.2259573590217436):0.5897290539580256,((taxon_7:0.1868771708975974,taxon_8:0.1868771708975974):0.4243641185133138,(taxon_9:0.3198489681038392,taxon_10:0.3198489681038392):0.2913923213070719):0.204445123568858):1.7096665480232482); +((taxon_1:2.5111316337051814,taxon_2:2.5111316337051814):0.3481425759777773,((taxon_3:0.6910860238558354,((taxon_4:0.2424698987046709,taxon_5:0.2424698987046709):0.2368766379862306,taxon_6:0.4793465366909015):0.2117394871649338):0.2378085018735887,(((taxon_7:0.1891811365754696,taxon_8:0.1891811365754696):0.1821782905695408,taxon_9:0.3713594271450105):0.4608637464934526,taxon_10:0.8322231736384631):0.096671352090961):1.9303796839535345); +((taxon_1:0.2033079429456566,taxon_2:0.2033079429456566):1.2652549045497803,(((taxon_3:0.3732611733202167,taxon_4:0.3732611733202167):0.3630264849494399,taxon_5:0.7362876582696566):0.6707873762311953,((taxon_6:0.2523998805907495,taxon_7:0.2523998805907495):0.0625037048320458,((taxon_8:0.2115829922952546,taxon_9:0.2115829922952546):0.0765159158832471,taxon_10:0.2880989081785017):0.0268046772442936):1.0921714490780565):0.061487812994585); +((taxon_1:1.1308872056847084,taxon_2:1.1308872056847084):1.0218831670878319,((taxon_3:0.6732659917130628,taxon_4:0.6732659917130628):0.8475041391714518,(((taxon_5:0.1944446035546392,taxon_6:0.1944446035546392):0.5710066076875013,(taxon_7:0.7529289861169874,taxon_8:0.7529289861169874):0.0125222251251531):0.7551765830089628,(taxon_9:1.3593286208380932,taxon_10:1.3593286208380932):0.1612991734130101):0.0001423366334112):0.6320002418880256); +((taxon_1:1.5903190395786251,((taxon_2:0.6874181502868827,taxon_3:0.6874181502868827):0.5953344771316889,taxon_4:1.2827526274185717):0.3075664121600535):0.0449595135283406,((taxon_5:0.1170463252293614,taxon_6:0.1170463252293614):1.0628898500060977,(((taxon_7:0.3773522960651339,taxon_8:0.3773522960651339):0.2344488872872466,taxon_9:0.6118011833523804):0.1228399314958801,taxon_10:0.7346411148482606):0.4452950603871985):0.4553423778715066); +(((taxon_1:0.1997708625585071,taxon_2:0.1997708625585071):0.3368452393158146,taxon_3:0.5366161018743216):0.889732427897024,((taxon_4:0.8031920061512311,((taxon_5:0.4842802784420709,taxon_6:0.4842802784420709):0.1310659913431322,taxon_7:0.6153462697852031):0.187845736366028):0.2786283092372168,((taxon_8:0.3284427748419247,taxon_9:0.3284427748419247):0.0294629187734523,taxon_10:0.3579056936153771):0.7239146217730709):0.3445282143828977); +(((taxon_1:0.4668313859835509,taxon_2:0.4668313859835509):0.57862095554632,(taxon_3:0.2520705438895507,taxon_4:0.2520705438895507):0.7933817976403201):1.0008787008281617,((taxon_5:1.6179619712377999,((taxon_6:0.4841789627448252,(taxon_7:0.3257572139366554,taxon_8:0.3257572139366554):0.1584217488081698):0.7747463196992566,taxon_9:1.2589252824440818):0.3590366887937182):0.1070190379893574,taxon_10:1.7249810092271574):0.3213500331308752); +((taxon_1:0.3609912049151163,taxon_2:0.3609912049151163):1.5493026936889756,(((taxon_3:0.5365339339938773,taxon_4:0.5365339339938773):0.4459266102974353,(taxon_5:0.5436316160110009,(taxon_6:0.4600811554252451,taxon_7:0.4600811554252451):0.0835504605857558):0.4388289282803117):0.151599733268827,((taxon_8:0.1422523497453625,taxon_9:0.1422523497453625):0.7699455023130094,taxon_10:0.9121978520583719):0.2218624255017677):0.7762336210439522); +((((taxon_1:0.5995204486346795,(taxon_2:0.2901685317669007,(taxon_3:0.2667804091090515,taxon_4:0.2667804091090515):0.0233881226578492):0.3093519168677787):0.1985977884672301,taxon_5:0.7981182371019095):0.6565730193372349,(taxon_6:0.373844880775162,taxon_7:0.373844880775162):1.0808463756639823):0.1359881474720944,((taxon_8:0.7201510749204754,taxon_9:0.7201510749204754):0.1792558165834424,taxon_10:0.8994068915039177):0.6912725124073211); +((taxon_1:0.5608045615082704,taxon_2:0.5608045615082704):1.2943672914932469,((((taxon_3:0.4438920688002328,taxon_4:0.4438920688002328):0.2142584735283479,(((taxon_5:0.0608810680841965,taxon_6:0.0608810680841965):0.006507747510704,taxon_7:0.0673888155949005):0.569929657146151,taxon_8:0.6373184727410515):0.0208320695875293):0.5032033393287906,taxon_9:1.1613538816573712):0.237150159471214,taxon_10:1.3985040411285854):0.456667811872932); diff --git a/src/aa2cdn.cpp b/src/aa2cdn.cpp new file mode 100644 index 0000000..a1664e7 --- /dev/null +++ b/src/aa2cdn.cpp @@ -0,0 +1,131 @@ +#include +#include +#include + +#include "aa2cdn.h" +#include "sequence.h" +#include "seq_utils.h" +#include "utils.h" + + +struct SequenceIDListCompare { + bool operator()(const Sequence& lhs, const Sequence& rhs) { + return lhs.get_id() < rhs.get_id(); + } +} SequenceIDListCompare; + + +AAtoCDN::AAtoCDN (std::vector nuc_seqs, std::vector aa_seqs, + const bool& remove_last):remove_last_(remove_last), nuc_seqs_(std::move(nuc_seqs)), + aa_seqs_(std::move(aa_seqs)) { + // set up names + nuc_names_ = collect_names(nuc_seqs_); + aa_names_ = collect_names(aa_seqs_); + + sort(aa_seqs_.begin(), aa_seqs_.end(), SequenceIDListCompare); + sort(nuc_seqs_.begin(), nuc_seqs_.end(), SequenceIDListCompare); + check_names(); + generate_codon_alignment(); +} + + +// check for taxa present in only nuc or aa alignments. +// print these to cerr, and remove from the respective alignment +void AAtoCDN::check_names () { + std::vector diff; + diff = in_first_not_second(nuc_names_, aa_names_); + if (!diff.empty()) { + std::cerr << "The following names are present in the nucleotide alignment, but not the protein alignment:" + << std::endl; + for (auto & d : diff) { + std::cerr << d << std::endl; + // remove from alignment + for (unsigned int j = 0; j < nuc_seqs_.size(); j++) { + if (nuc_seqs_[j].get_id() == d) { + nuc_seqs_.erase(nuc_seqs_.begin()+j); + break; + } + } + } + } + if (nuc_seqs_.empty()) { + std::cerr << "Error: no names are present in both the nucleotide and protein alignments. Exiting." + << std::endl; + exit(1); + } + + // now the other direction + diff = in_first_not_second(aa_names_, nuc_names_); + if (!diff.empty()) { + std::cerr << "The following names are present in the protein alignment, but not the nucleotide alignment:" + << std::endl; + for (const auto & di : diff) { + std::cerr << di << std::endl; + // remove from alignment + for (unsigned int j = 0; j < aa_seqs_.size(); j++) { + if (aa_seqs_[j].get_id() == di) { + aa_seqs_.erase(aa_seqs_.begin()+j); + break; + } + } + } + } +} + + +// at this point, alignments should be of the same size and order +void AAtoCDN::generate_codon_alignment () { + std::string aaseq; + std::string nucseq; + std::string codonseq; + Sequence seq; + for (unsigned int i = 0; i < aa_seqs_.size(); i++) { + seq.set_id(aa_seqs_[i].get_id()); + aaseq = aa_seqs_[i].get_sequence(); + nucseq = nuc_seqs_[i].get_sequence(); + codonseq = ""; + auto aalen = static_cast(aaseq.size()); + + // check that seq lengths correspond + unsigned int ncodons = static_cast(nucseq.length()) / 3u; + unsigned int naachars = aalen - static_cast(std::count(aaseq.begin(), aaseq.end(), '-')); + if (ncodons != naachars) { + std::cerr << "Error: for taxon '" << aa_seqs_[i].get_id() + << "' nucleotide alignment involves " << ncodons + << " codons, but protein alignment involves " << naachars + << " amino acids. Skipping." << std::endl; + continue; + } + + if (remove_last_) { + aalen--; + } + unsigned int nuccntr = 0; + for (unsigned int j = 0; j < aalen; j++) { + if (aaseq[j] == '-') { + codonseq += "---"; + } else { + for (int k = 0; k < 3; k++) { + codonseq += nucseq[nuccntr]; + nuccntr++; + } + } + } + seq.set_sequence(codonseq); + codon_seqs_.push_back(seq); + } +} + + +void AAtoCDN::write_codon_alignment (std::ostream* poos) { + for (auto & codon_seq : codon_seqs_) { + (*poos) << ">" << codon_seq.get_id() << std::endl; + (*poos) << codon_seq.get_sequence() << std::endl; + } +} + + +// not currently used, but available +std::vector AAtoCDN::get_codon_alignment () const { + return codon_seqs_; +} diff --git a/src/aa2cdn.h b/src/aa2cdn.h new file mode 100644 index 0000000..962c1b5 --- /dev/null +++ b/src/aa2cdn.h @@ -0,0 +1,29 @@ +#ifndef PX_AA_TO_CDN_H +#define PX_AA_TO_CDN_H + +#include + +#include "sequence.h" + + +class AAtoCDN { +private: + bool remove_last_; + std::vector nuc_seqs_; + std::vector aa_seqs_; + std::vector codon_seqs_; + std::vector nuc_names_; + std::vector aa_names_; + + void check_names (); + void generate_codon_alignment (); + +public: + AAtoCDN (); + AAtoCDN (std::vector nuc_seqs, std::vector aa_seqs, + const bool& remove_last); + void write_codon_alignment (std::ostream* poos); + std::vector get_codon_alignment () const; +}; + +#endif /* PX_AA_TO_CDN_H */ diff --git a/src/bd_fit.cpp b/src/bd_fit.cpp new file mode 100644 index 0000000..f1fae6a --- /dev/null +++ b/src/bd_fit.cpp @@ -0,0 +1,208 @@ +#include +#include +#include +#include +#include +#include +#include + +#include "bd_fit.h" +#include "tree.h" +#include "node.h" +#include "tree_utils.h" + + +// hrm a debugging thing i gather +//int counter = 0; + + +using analysis_data = struct { + unsigned int N = 0; + std::vector bt; +}; + + +BDFit::BDFit (Tree * intree, std::string& modelflavour):model_(std::move(modelflavour)), + lambda_bd_(0.0), lambda_yule_(0.0), mu_(0.0), r_(0.0), epsilon_(0.0), + likelihood_bd_(0.0), likelihood_yule_(0.0), aic_bd_(0.0), aicc_bd_(0.0), + aic_yule_(0.0), aicc_yule_(0.0), treelength_(0.0), nintnodes_(0.0), + nspeciation_(0.0), ntips_(0), rootheight_(0.0) { + tree_ = intree; + fit_model(); +} + + +void BDFit::fit_model () { + treelength_ = get_tree_length(tree_); + nintnodes_ = tree_->getInternalNodeCount(); + nspeciation_ = nintnodes_ - 1.0; + ntips_ = tree_->getExternalNodeCount(); + rootheight_ = tree_->getRoot()->getHeight(); + // model flavour is checked + if (model_ == "yule") { + fit_yule(); + } else if (model_ == "bd") { + fit_bd(); + } else if (model_ == "best") { + get_best_model(); + } +} + + +// find the best model between yule and bd using aic +void BDFit::get_best_model () { + treelength_ = get_tree_length(tree_); + nintnodes_ = tree_->getInternalNodeCount(); + nspeciation_ = nintnodes_ - 1.0; + ntips_ = tree_->getExternalNodeCount(); + rootheight_ = tree_->getRoot()->getHeight(); + fit_yule(); + fit_bd(); + if (aicc_yule_ < aicc_bd_) { + std::cout << "yule model fits better by " << aicc_bd_ - aicc_yule_ + << " AICc units" << std::endl; + model_ = "yule"; + } else { + std::cout << "bd model fits better by " << aicc_yule_ - aicc_bd_ + << " AICc units" << std::endl; + model_ = "bd"; + } + +} + + +/* +ML for lambda is simply: (nintnodes - 1) / treelength + - start with 2 lineages i.e. do not count speciation at root + - that is, there are (nintnodes - 1) speciation events + +Likelihood = (nintnodes - 1) * log(lambda) - lambda * treelength + lfactorial(nintnodes) + +for n, x = (n+1); lfactorial(x) = (x - 0.5)*log(x) - x + 0.5*log(2*PI) + 1.0/(12.0*x); + +Easier: factorial(n) = gamma(n+1) + lfactorial(n) = std::lgamma(n+1) +*/ +void BDFit::fit_yule () { + lambda_yule_ = nspeciation_ / treelength_; + likelihood_yule_ = nspeciation_ * log(lambda_yule_) - lambda_yule_ * treelength_ + + std::lgamma(nintnodes_ + 1.0); + get_aic(likelihood_yule_, aic_yule_, aicc_yule_); +} + + +void BDFit::fit_bd() { + auto nn = static_cast(nintnodes_); + branching_times_.resize(nn); + for (size_t i = 0; i < nn; i++) { + branching_times_[i] = tree_->getInternalNode(static_cast(i))->getHeight(); + } + + // sort in descending order + sort(branching_times_.begin(), branching_times_.end(), std::greater<>()); + + analysis_data a; + a.N = ntips_; + a.bt = branching_times_; + + // explore different algorithms here + // the following give error: nlopt roundoff-limited + //nlopt::opt opt(nlopt::LN_COBYLA, 2); + //nlopt::opt opt(nlopt::LN_BOBYQA, 2); + + nlopt::opt opt(nlopt::LN_PRAXIS, 2); // example: variable iterations, most smaller + //nlopt::opt opt(nlopt::LN_NELDERMEAD, 2); // example: 223 iterations + //nlopt::opt opt(nlopt::LN_SBPLX, 2); // example: 316 iterations + + opt.set_min_objective(nlopt_bd_log_lik, &a); + + // parameters: r, epsilon + std::vector x(2); + // starting values. maybe use intelligent starting values + x[0] = 0.05; + x[1] = 0.5; // lambda = 0.1, mu = 0.05 + + // ML vals for example tree + //x[0] = 0.7383142; x[1] = 0.3018887; + + // lower bounds: 0 for both r, epsilon + opt.set_lower_bounds(0.0); + // upper bounds: none for r, 1 for epsilon + std::vector ub(2); + ub[0] = 50; + ub[1] = 1; + opt.set_upper_bounds(ub); + + double minf; + opt.optimize(x, minf); + + r_ = x[0]; + epsilon_ = x[1]; + lambda_bd_ = r_ / (1 - epsilon_); + mu_ = lambda_bd_ - r_; + + likelihood_bd_ = -minf; + get_aic (likelihood_bd_, aic_bd_, aicc_bd_); + //std::cout << "found minimum after " << counter << " evaluations." << std::endl; +} + + +double nlopt_bd_log_lik (const std::vector& x, std::vector& grad, + void *data) { + // count iterations for optimization of algorithm + //counter++; + + auto d = static_cast(data); + + unsigned int N = d->N; + std::vector bt = d->bt; + + double lik = std::lgamma(N) + (N - 2) * log(x[0]) + N * log(1 - x[1]); + + lik += (x[0] * std::accumulate(bt.begin()+1, bt.end(), 0.0)); + + double tempsum = 0.0; + for (double i : bt) { + tempsum += log(exp(i * x[0]) - x[1]); + } + + lik += tempsum * (-2); + + return -lik; +} + + +// calculate model-specific raw and small-sample-corrected AIC +// 'n' here (number of data points) is taken as the number of terminals +void BDFit::get_aic (const double& lik, double& aic, double& aicc) { + double K = 1.0; + auto n = static_cast(ntips_); + if (model_ == "bd") { + K = 2.0; + } + aic = (-2.0 * lik) + (2.0 * K); + aicc = aic + (2.0 * K * (K + 1.0)) / (n - K - 1.0); +} + + +void BDFit::get_pars (std::ostream* poos) const { + (*poos) << "ntips: " << ntips_ << std::endl; + (*poos) << "nspeciation: " << nspeciation_ << std::endl; + (*poos) << "treelength: " << treelength_ << std::endl; + (*poos) << "rootheight: " << rootheight_ << std::endl; + (*poos) << "model: " << model_ << std::endl; + if (model_ == "yule") { + (*poos) << "likelihood: " << likelihood_yule_ << std::endl; + (*poos) << "aic: " << aic_yule_ << std::endl; + (*poos) << "aicc: " << aicc_yule_ << std::endl; + (*poos) << "b: " << lambda_yule_ << std::endl; + } else if (model_ == "bd") { + (*poos) << "likelihood: " << likelihood_bd_ << std::endl; + (*poos) << "aic: " << aic_bd_ << std::endl; + (*poos) << "aicc: " << aicc_bd_ << std::endl; + (*poos) << "b: " << lambda_bd_ << std::endl; + (*poos) << "d: " << mu_ << std::endl; + (*poos) << "r (b-d): " << r_ << std::endl; + (*poos) << "e (d/b): " << epsilon_ << std::endl; + } +} diff --git a/src/bd_fit.h b/src/bd_fit.h new file mode 100644 index 0000000..a3d65b2 --- /dev/null +++ b/src/bd_fit.h @@ -0,0 +1,52 @@ +#ifndef PX_BD_FIT_H +#define PX_BD_FIT_H + +#include +#include +#include + +class Tree; // forward declaration + +class BDFit { +private: + std::string model_; + + double lambda_bd_; + double lambda_yule_; + double mu_; + double r_; + double epsilon_; + + double likelihood_bd_; + double likelihood_yule_; + + double aic_bd_; + double aicc_bd_; + double aic_yule_; + double aicc_yule_; + + Tree* tree_; + double treelength_; + // why are the following doubles?!? for eventual maths, obvs, but seems stupid here + double nintnodes_; + double nspeciation_; + unsigned int ntips_; + std::vector branching_times_; + double rootheight_; + + void fit_model(); + void get_best_model(); + void fit_yule(); + void fit_bd(); + void get_aic(const double& lik, double& aic, double& aicc); + +public: + BDFit(Tree * intree, std::string& modelflavour); + void get_pars(std::ostream* poos) const; +}; + +// non-member function, as nlopt is weird with pointers... +double nlopt_bd_log_lik (const std::vector& x, std::vector& grad, + void *data); + +#endif /* PX_BD_FIT_H */ diff --git a/src/bd_sim.cpp b/src/bd_sim.cpp new file mode 100644 index 0000000..e8f89c9 --- /dev/null +++ b/src/bd_sim.cpp @@ -0,0 +1,288 @@ +#include +#include +#include +#include +#include +#include +#include +#include +#include + +#include "bd_sim.h" +#include "tree.h" +#include "node.h" +#include "utils.h" + + +BirthDeathSimulator::BirthDeathSimulator (const int& estop, const double& tstop, + const double& brate, const double& drate, const long int& seed):numfailures_(0), + maxfailures_(1000), birthrate_(brate), deathrate_(drate), sumrate_(brate+drate), + relative_birth_rate_(brate/(brate+drate)), extantstop_(estop), timestop_(tstop), + numbirth_(0), numdeath_(0), seed_(seed), currenttime_(0.0), + extantnodes_(std::vector()), BIRTHTIME_(std::map()), + DEATHTIME_(std::map()), root_(nullptr), tree_(nullptr) { + if (seed_ == -1) { + seed_ = get_clock_seed(); + } + generator_ = std::mt19937(seed_); + uniformDistrib_ = std::uniform_real_distribution(0.0, 1.0); +} + + +// not currently used +BirthDeathSimulator::BirthDeathSimulator ():numfailures_(0), maxfailures_(1000), + birthrate_(0.1), deathrate_(0.05), sumrate_(0.1+0.05), + relative_birth_rate_(0.1/(0.1+0.05)), extantstop_(10), timestop_(0), numbirth_(0), + numdeath_(0), currenttime_(0.0), extantnodes_(std::vector()), + BIRTHTIME_(std::map()), DEATHTIME_(std::map()), + root_(nullptr), tree_(nullptr) { + seed_ = get_clock_seed(); + generator_ = std::mt19937(seed_); + uniformDistrib_ = std::uniform_real_distribution(0.0, 1.0); +} + + +void BirthDeathSimulator::setup_parameters () { + numbirth_ = 0; + numdeath_ = 0; + currenttime_ = 0.0; + extantnodes_ = std::vector(); + dead_nodes_ = std::vector(); + BIRTHTIME_ = std::map(); + DEATHTIME_ = std::map(); +} + + +Tree * BirthDeathSimulator::make_tree (const bool& show_dead) { + setup_parameters(); + root_ = new Node(); + BIRTHTIME_[root_] = currenttime_; + extantnodes_.push_back(root_); + + // actually want to start with 2 lineages + node_birth(extantnodes_[0]); + + // reset failures to zero. don't want to accumulate errors across replicates + numfailures_ = 0; + bool going = true; + while (going) { + double dt = time_to_next_event(); + currenttime_ += dt; + going = check_stop_conditions(); + if (going) { + event(); + if (extantnodes_.empty()) { + numfailures_ += 1; + //std::cout << "failed!" << std::endl; + if (numfailures_ >= maxfailures_) { + std::cout << "Reached maximum number of failures (" << numfailures_ + << "). Quitting." << std::endl; + exit(0); + } + setup_parameters(); + root_ = new Node(); // need to clean + BIRTHTIME_[root_] = currenttime_; // need to clean + extantnodes_.push_back(root_); // empty + numbirth_ = 0; // reset + numdeath_ = 0; // reset + } + } + } + + std::vector temp_extant_nodes(extantnodes_); + for (auto & temp_extant_node : temp_extant_nodes) { + try { + DEATHTIME_[temp_extant_node]; + node_death(temp_extant_node); + } catch( char * str ) { + std::cerr << "catch (" << str << ")" << std::endl; + node_death(temp_extant_node); + //temp_extant_nodes[i]->istip = 1 + } + } + + root_->setBL(0); + double totallength = 0; + int count = 1; + tree_ = new Tree(root_); + tree_->processRoot(); + if (!show_dead) { + delete_dead_nodes(); + } + + for (unsigned int i = 0; i < tree_->getExternalNodeCount(); i++) { + totallength += tree_->getExternalNode(i)->getBL(); + std::stringstream out; + out << count; + tree_->getExternalNode(i)->setName("taxon_"+out.str()); + count += 1; + } + return tree_; +} + + +// verbose summary: +// birth & death rate, numbirths, numdeaths, numfailures, seed +std::string BirthDeathSimulator::get_sim_summary () const { + std::string res; + + res += "birth rate = " + std::to_string(birthrate_); + res += "; death rate = " + std::to_string(deathrate_); + res += "; num births = " + std::to_string(numbirth_); + res += "; num deaths = " + std::to_string(numdeath_); + res += "; num failures = " + std::to_string(numfailures_); + res += "; seed = " + std::to_string(seed_); + + return res; +} + + +bool BirthDeathSimulator::check_stop_conditions () { + bool keepgoing = true; + if (extantstop_ > 0) { + if (static_cast(extantnodes_.size()) >= extantstop_) { + // this ensures tips do not have 0 edge lengths + currenttime_ += time_to_next_event(); + keepgoing = false; + } + } + if (timestop_ > 0) { + if (currenttime_ >= timestop_) { + // definitely want this, or tree can be older than timestop + currenttime_ = timestop_; + keepgoing = false; + } + } + return keepgoing; +} + + +// time until next event (rate = sum of birth + death) +double BirthDeathSimulator::time_to_next_event () { + //double num = rand() / double(RAND_MAX); + double num = uniformDistrib_(generator_); + return (-log(num))/ ( (extantnodes_.size()) * sumrate_); +} + + +void BirthDeathSimulator::event () { + std::uniform_int_distribution intDistrib(0, (static_cast(extantnodes_.size())-1)); + int random_integer = intDistrib(generator_); + //std::cout << "extantnodes.size() = " << extantnodes.size() << "; random_integer = " + // << random_integer << std::endl; + Node * extant = extantnodes_[static_cast(random_integer)]; + if (event_is_birth()) { + node_birth(extant); // speciation + numbirth_++; + } else { + node_death(extant); // extinction + dead_nodes_.push_back(extant); + numdeath_++; + } +} + + +void BirthDeathSimulator::node_death (Node *innode) { + DEATHTIME_[innode] = currenttime_; + double bl = DEATHTIME_[innode] - BIRTHTIME_[innode]; + innode->setBL(bl); + extantnodes_.erase(find(extantnodes_.begin(), extantnodes_.end(), innode)); +} + + +void BirthDeathSimulator::node_birth (Node *innode) { + auto * left = new Node(); + auto * right = new Node(); + innode->addChild(*left); + innode->addChild(*right); + BIRTHTIME_[left] = currenttime_; + BIRTHTIME_[right] = currenttime_; + node_death(innode); + extantnodes_.push_back(left); + extantnodes_.push_back(right); +} + + +void BirthDeathSimulator::delete_dead_nodes () { + for (auto & dead_node : dead_nodes_) { + delete_a_node(dead_node); + } +} + + +// this implicitly assumes a binary tree, which will be true bc simulation +void BirthDeathSimulator::delete_a_node (Node * innode) { + Node * tparent = innode->getParent(); + if (tparent != root_) { + for (unsigned int i = 0; i < tparent->getChildCount(); i++) { + if (tparent->getChild(i) != innode) { + Node * child = tparent->getChild(i); + Node * pparent = tparent->getParent(); + tparent->removeChild(*innode); + tparent->removeChild(*child); + pparent->removeChild(*tparent); + pparent->addChild(*child); + child->setParent(*pparent); + child->setBL(child->getBL()+tparent->getBL()); + } + } + + } else { + for (unsigned int i = 0; i < tparent->getChildCount(); i++) { + if (tparent->getChild(i) != innode) { + Node * child = tparent->getChild(i); + tparent->removeChild(*innode); + tree_->setRoot(child); + root_ = child; + } + } + } +} + + +bool BirthDeathSimulator::event_is_birth () { + bool res = false; + double x = uniformDistrib_(generator_); + if (x < relative_birth_rate_) { + res = true; + } + return res; +} + + +// hrm not currently used +/* +void BirthDeathSimulator::set_distance_to_tip () { + for (int i = 0; i < tree_->getExternalNodeCount(); i++) { + double curh = 0.0; + tree_->getExternalNode(i)->setHeight(curh); + Node * tnode = tree_->getExternalNode(i); + while (tnode->hasParent()) { + curh += tnode->getBL(); + if (tnode->getHeight() < curh) { + tnode->setHeight(curh); + } + tnode = tnode->getParent(); + } + curh += tnode->getBL(); + if (tnode->getHeight() < curh) { + tnode->setHeight(curh); + } + } +} +*/ + + +// also not currently used +/* +double BirthDeathSimulator::get_distance_from_tip (Node *innode) { + Node * cur = innode; + double curh = 0.0; + while (cur->hasParent()) { + curh += cur->getBL(); + cur = cur->getParent(); + } + curh += cur->getBL(); + return curh; +} +*/ diff --git a/src/bd_sim.h b/src/bd_sim.h new file mode 100644 index 0000000..13cefb0 --- /dev/null +++ b/src/bd_sim.h @@ -0,0 +1,57 @@ +#ifndef PX_BD_SIM_H +#define PX_BD_SIM_H + +#include +#include + +class Tree; // forward declaration +class Node; // forward declaration + +class BirthDeathSimulator { +private: + int numfailures_; + int maxfailures_; + double birthrate_; + double deathrate_; + double sumrate_; + double relative_birth_rate_; + int extantstop_; + double timestop_; + int numbirth_; + int numdeath_; + long int seed_; + double currenttime_; + std::vector extantnodes_; + std::vector dead_nodes_; + std::map BIRTHTIME_; + std::map DEATHTIME_; + Node* root_; + Tree* tree_; + + std::mt19937 generator_; + std::uniform_real_distribution uniformDistrib_; + + bool check_stop_conditions (); + double time_to_next_event (); + void event (); + void node_death (Node *); + void node_birth (Node *); + void delete_dead_nodes (); + void setup_parameters (); + bool event_is_birth (); + void delete_a_node (Node *); + + // these are not currently used + //double get_distance_from_tip (Node *innode); + //void set_distance_to_tip (); + +public: + BirthDeathSimulator (); + BirthDeathSimulator (const int& estop, const double& tstop, const double& brate, + const double& drate, const long int& seed); + Tree * make_tree (const bool& show_dead); + std::string get_sim_summary () const; + //~BirthDeathSimulator(); +}; + +#endif /* PX_BD_SIM_H */ diff --git a/src/blas.f b/src/blas.f new file mode 100644 index 0000000..481935b --- /dev/null +++ b/src/blas.f @@ -0,0 +1,2381 @@ +* Subset of BLAS routines used by EXPOKIT. +* This file is supplied in case BLAS is not installed in your +* environment. +*----------------------------------------------------------------------| + SUBROUTINE XERBLA ( SRNAME, INFO ) +* .. Scalar Arguments .. + INTEGER INFO + CHARACTER*6 SRNAME +* .. +* +* Purpose +* ======= +* +* XERBLA is an error handler for the Level 2 BLAS routines. +* +* It is called by the Level 2 BLAS routines if an input parameter is +* invalid. +* +* Installers should consider modifying the STOP statement in order to +* call system-specific exception-handling facilities. +* +* Parameters +* ========== +* +* SRNAME - CHARACTER*6. +* On entry, SRNAME specifies the name of the routine which +* called XERBLA. +* +* INFO - INTEGER. +* On entry, INFO specifies the position of the invalid +* parameter in the parameter-list of the calling routine. +* +* +* Auxiliary routine for Level 2 Blas. +* +* Written on 20-July-1986. +* +* .. Executable Statements .. +* + WRITE (*,99999) SRNAME, INFO +* + STOP +* +99999 FORMAT ( ' ** On entry to ', A6, ' parameter number ', I2, + $ ' had an illegal value' ) +* +* End of XERBLA. +* + END +*----------------------------------------------------------------------| + LOGICAL FUNCTION LSAME( CA, CB ) +* +* -- LAPACK auxiliary routine (version 1.1) -- +* Univ. of Tennessee, Univ. of California Berkeley, NAG Ltd., +* Courant Institute, Argonne National Lab, and Rice University +* February 29, 1992 +* +* .. Scalar Arguments .. + CHARACTER CA, CB +* .. +* +* Purpose +* ======= +* +* LSAME returns .TRUE. if CA is the same letter as CB regardless of +* case. +* +* Arguments +* ========= +* +* CA (input) CHARACTER*1 +* CB (input) CHARACTER*1 +* CA and CB specify the single characters to be compared. +* +* .. Intrinsic Functions .. + INTRINSIC ICHAR +* .. +* .. Local Scalars .. + INTEGER INTA, INTB, ZCODE +* .. +* .. Executable Statements .. +* +* Test if the characters are equal +* + LSAME = CA.EQ.CB + IF( LSAME ) + $ RETURN +* +* Now test for equivalence if both characters are alphabetic. +* + ZCODE = ICHAR( 'Z' ) +* +* Use 'Z' rather than 'A' so that ASCII can be detected on Prime +* machines, on which ICHAR returns a value with bit 8 set. +* ICHAR('A') on Prime machines returns 193 which is the same as +* ICHAR('A') on an EBCDIC machine. +* + INTA = ICHAR( CA ) + INTB = ICHAR( CB ) +* + IF( ZCODE.EQ.90 .OR. ZCODE.EQ.122 ) THEN +* +* ASCII is assumed - ZCODE is the ASCII code of either lower or +* upper case 'Z'. +* + IF( INTA.GE.97 .AND. INTA.LE.122 ) INTA = INTA - 32 + IF( INTB.GE.97 .AND. INTB.LE.122 ) INTB = INTB - 32 +* + ELSE IF( ZCODE.EQ.233 .OR. ZCODE.EQ.169 ) THEN +* +* EBCDIC is assumed - ZCODE is the EBCDIC code of either lower or +* upper case 'Z'. +* + IF( INTA.GE.129 .AND. INTA.LE.137 .OR. + $ INTA.GE.145 .AND. INTA.LE.153 .OR. + $ INTA.GE.162 .AND. INTA.LE.169 ) INTA = INTA + 64 + IF( INTB.GE.129 .AND. INTB.LE.137 .OR. + $ INTB.GE.145 .AND. INTB.LE.153 .OR. + $ INTB.GE.162 .AND. INTB.LE.169 ) INTB = INTB + 64 +* + ELSE IF( ZCODE.EQ.218 .OR. ZCODE.EQ.250 ) THEN +* +* ASCII is assumed, on Prime machines - ZCODE is the ASCII code +* plus 128 of either lower or upper case 'Z'. +* + IF( INTA.GE.225 .AND. INTA.LE.250 ) INTA = INTA - 32 + IF( INTB.GE.225 .AND. INTB.LE.250 ) INTB = INTB - 32 + END IF + LSAME = INTA.EQ.INTB +* +* RETURN +* +* End of LSAME +* + END +*----------------------------------------------------------------------| + double precision function dcabs1(z) + complex*16 z,zz + double precision t(2) + equivalence (zz,t(1)) + zz = z + dcabs1 = dabs(t(1)) + dabs(t(2)) + return + end +*----------------------------------------------------------------------| + subroutine zaxpy(n,za,zx,incx,zy,incy) +c +c constant times a vector plus a vector. +c jack dongarra, 3/11/78. +c + complex*16 zx(1),zy(1),za + double precision dcabs1 + if(n.le.0)return + if (dcabs1(za) .eq. 0.0d0) return + if (incx.eq.1.and.incy.eq.1)go to 20 +c +c code for unequal increments or equal increments +c not equal to 1 +c + ix = 1 + iy = 1 + if(incx.lt.0)ix = (-n+1)*incx + 1 + if(incy.lt.0)iy = (-n+1)*incy + 1 + do 10 i = 1,n + zy(iy) = zy(iy) + za*zx(ix) + ix = ix + incx + iy = iy + incy + 10 continue + return +c +c code for both increments equal to 1 +c + 20 do 30 i = 1,n + zy(i) = zy(i) + za*zx(i) + 30 continue + return + end +*----------------------------------------------------------------------| + integer function idamax(n,dx,incx) +c +c finds the index of element having max. absolute value. +c jack dongarra, linpack, 3/11/78. +c modified 3/93 to return if incx .le. 0. +c + double precision dx(1),dmax + integer i,incx,ix,n +c + idamax = 0 + if( n.lt.1 .or. incx.le.0 ) return + idamax = 1 + if(n.eq.1)return + if(incx.eq.1)go to 20 +c +c code for increment not equal to 1 +c + ix = 1 + dmax = dabs(dx(1)) + ix = ix + incx + do 10 i = 2,n + if(dabs(dx(ix)).le.dmax) go to 5 + idamax = i + dmax = dabs(dx(ix)) + 5 ix = ix + incx + 10 continue + return +c +c code for increment equal to 1 +c + 20 dmax = dabs(dx(1)) + do 30 i = 2,n + if(dabs(dx(i)).le.dmax) go to 30 + idamax = i + dmax = dabs(dx(i)) + 30 continue + return + end +*----------------------------------------------------------------------| + double precision function dasum(n,dx,incx) +c +c takes the sum of the absolute values. +c jack dongarra, linpack, 3/11/78. +c modified 3/93 to return if incx .le. 0. +c + double precision dx(1),dtemp + integer i,incx,m,mp1,n,nincx +c + dasum = 0.0d0 + dtemp = 0.0d0 + if( n.le.0 .or. incx.le.0 )return + if(incx.eq.1)go to 20 +c +c code for increment not equal to 1 +c + nincx = n*incx + do 10 i = 1,nincx,incx + dtemp = dtemp + dabs(dx(i)) + 10 continue + dasum = dtemp + return +c +c code for increment equal to 1 +c +c +c clean-up loop +c + 20 m = mod(n,6) + if( m .eq. 0 ) go to 40 + do 30 i = 1,m + dtemp = dtemp + dabs(dx(i)) + 30 continue + if( n .lt. 6 ) go to 60 + 40 mp1 = m + 1 + do 50 i = mp1,n,6 + dtemp = dtemp + dabs(dx(i)) + dabs(dx(i + 1)) + dabs(dx(i + 2)) + * + dabs(dx(i + 3)) + dabs(dx(i + 4)) + dabs(dx(i + 5)) + 50 continue + 60 dasum = dtemp + return + end +*----------------------------------------------------------------------| + subroutine dscal(n,da,dx,incx) +c +c scales a vector by a constant. +c uses unrolled loops for increment equal to one. +c jack dongarra, linpack, 3/11/78. +c modified 3/93 to return if incx .le. 0. +c + double precision da,dx(1) + integer i,incx,m,mp1,n,nincx +c + if( n.le.0 .or. incx.le.0 )return + if(incx.eq.1)go to 20 +c +c code for increment not equal to 1 +c + nincx = n*incx + do 10 i = 1,nincx,incx + dx(i) = da*dx(i) + 10 continue + return +c +c code for increment equal to 1 +c +c +c clean-up loop +c + 20 m = mod(n,5) + if( m .eq. 0 ) go to 40 + do 30 i = 1,m + dx(i) = da*dx(i) + 30 continue + if( n .lt. 5 ) return + 40 mp1 = m + 1 + do 50 i = mp1,n,5 + dx(i) = da*dx(i) + dx(i + 1) = da*dx(i + 1) + dx(i + 2) = da*dx(i + 2) + dx(i + 3) = da*dx(i + 3) + dx(i + 4) = da*dx(i + 4) + 50 continue + return + end +*----------------------------------------------------------------------| + subroutine dcopy(n,dx,incx,dy,incy) +c +c copies a vector, x, to a vector, y. +c uses unrolled loops for increments equal to one. +c jack dongarra, linpack, 3/11/78. +c + double precision dx(1),dy(1) + integer i,incx,incy,ix,iy,m,mp1,n +c + if(n.le.0)return + if(incx.eq.1.and.incy.eq.1)go to 20 +c +c code for unequal increments or equal increments +c not equal to 1 +c + ix = 1 + iy = 1 + if(incx.lt.0)ix = (-n+1)*incx + 1 + if(incy.lt.0)iy = (-n+1)*incy + 1 + do 10 i = 1,n + dy(iy) = dx(ix) + ix = ix + incx + iy = iy + incy + 10 continue + return +c +c code for both increments equal to 1 +c +c +c clean-up loop +c + 20 m = mod(n,7) + if( m .eq. 0 ) go to 40 + do 30 i = 1,m + dy(i) = dx(i) + 30 continue + if( n .lt. 7 ) return + 40 mp1 = m + 1 + do 50 i = mp1,n,7 + dy(i) = dx(i) + dy(i + 1) = dx(i + 1) + dy(i + 2) = dx(i + 2) + dy(i + 3) = dx(i + 3) + dy(i + 4) = dx(i + 4) + dy(i + 5) = dx(i + 5) + dy(i + 6) = dx(i + 6) + 50 continue + return + end +*----------------------------------------------------------------------| + double precision function dnrm2 ( n, dx, incx) + integer i, incx, ix, j, n, next + double precision dx(1), cutlo, cuthi, hitest, sum, xmax,zero,one + data zero, one /0.0d0, 1.0d0/ +c +c euclidean norm of the n-vector stored in dx() with storage +c increment incx . +c if n .le. 0 return with result = 0. +c if n .ge. 1 then incx must be .ge. 1 +c +c c.l.lawson, 1978 jan 08 +c modified to correct failure to update ix, 1/25/92. +c modified 3/93 to return if incx .le. 0. +c +c four phase method using two built-in constants that are +c hopefully applicable to all machines. +c cutlo = maximum of dsqrt(u/eps) over all known machines. +c cuthi = minimum of dsqrt(v) over all known machines. +c where +c eps = smallest no. such that eps + 1. .gt. 1. +c u = smallest positive no. (underflow limit) +c v = largest no. (overflow limit) +c +c brief outline of algorithm.. +c +c phase 1 scans zero components. +c move to phase 2 when a component is nonzero and .le. cutlo +c move to phase 3 when a component is .gt. cutlo +c move to phase 4 when a component is .ge. cuthi/m +c where m = n for x() real and m = 2*n for complex. +c +c values for cutlo and cuthi.. +c from the environmental parameters listed in the imsl converter +c document the limiting values are as follows.. +c cutlo, s.p. u/eps = 2**(-102) for honeywell. close seconds are +c univac and dec at 2**(-103) +c thus cutlo = 2**(-51) = 4.44089e-16 +c cuthi, s.p. v = 2**127 for univac, honeywell, and dec. +c thus cuthi = 2**(63.5) = 1.30438e19 +c cutlo, d.p. u/eps = 2**(-67) for honeywell and dec. +c thus cutlo = 2**(-33.5) = 8.23181d-11 +c cuthi, d.p. same as s.p. cuthi = 1.30438d19 +c data cutlo, cuthi / 8.232d-11, 1.304d19 / +c data cutlo, cuthi / 4.441e-16, 1.304e19 / + data cutlo, cuthi / 8.232d-11, 1.304d19 / +c + if(n .gt. 0 .and. incx.gt.0) go to 10 + dnrm2 = zero + go to 300 +c + 10 assign 30 to next + sum = zero + i = 1 + ix = 1 +c begin main loop + 20 go to next,(30, 50, 70, 110) + 30 if( dabs(dx(i)) .gt. cutlo) go to 85 + assign 50 to next + xmax = zero +c +c phase 1. sum is zero +c + 50 if( dx(i) .eq. zero) go to 200 + if( dabs(dx(i)) .gt. cutlo) go to 85 +c +c prepare for phase 2. + assign 70 to next + go to 105 +c +c prepare for phase 4. +c + 100 continue + ix = j + assign 110 to next + sum = (sum / dx(i)) / dx(i) + 105 xmax = dabs(dx(i)) + go to 115 +c +c phase 2. sum is small. +c scale to avoid destructive underflow. +c + 70 if( dabs(dx(i)) .gt. cutlo ) go to 75 +c +c common code for phases 2 and 4. +c in phase 4 sum is large. scale to avoid overflow. +c + 110 if( dabs(dx(i)) .le. xmax ) go to 115 + sum = one + sum * (xmax / dx(i))**2 + xmax = dabs(dx(i)) + go to 200 +c + 115 sum = sum + (dx(i)/xmax)**2 + go to 200 +c +c +c prepare for phase 3. +c + 75 sum = (sum * xmax) * xmax +c +c +c for real or d.p. set hitest = cuthi/n +c for complex set hitest = cuthi/(2*n) +c + 85 hitest = cuthi/float( n ) +c +c phase 3. sum is mid-range. no scaling. +c + do 95 j = ix,n + if(dabs(dx(i)) .ge. hitest) go to 100 + sum = sum + dx(i)**2 + i = i + incx + 95 continue + dnrm2 = dsqrt( sum ) + go to 300 +c + 200 continue + ix = ix + 1 + i = i + incx + if( ix .le. n ) go to 20 +c +c end of main loop. +c +c compute square root and adjust for scaling. +c + dnrm2 = xmax * dsqrt(sum) + 300 continue + return + end +*----------------------------------------------------------------------| + double precision function ddot(n,dx,incx,dy,incy) +c +c forms the dot product of two vectors. +c uses unrolled loops for increments equal to one. +c jack dongarra, linpack, 3/11/78. +c + double precision dx(1),dy(1),dtemp + integer i,incx,incy,ix,iy,m,mp1,n +c + ddot = 0.0d0 + dtemp = 0.0d0 + if(n.le.0)return + if(incx.eq.1.and.incy.eq.1)go to 20 +c +c code for unequal increments or equal increments +c not equal to 1 +c + ix = 1 + iy = 1 + if(incx.lt.0)ix = (-n+1)*incx + 1 + if(incy.lt.0)iy = (-n+1)*incy + 1 + do 10 i = 1,n + dtemp = dtemp + dx(ix)*dy(iy) + ix = ix + incx + iy = iy + incy + 10 continue + ddot = dtemp + return +c +c code for both increments equal to 1 +c +c +c clean-up loop +c + 20 m = mod(n,5) + if( m .eq. 0 ) go to 40 + do 30 i = 1,m + dtemp = dtemp + dx(i)*dy(i) + 30 continue + if( n .lt. 5 ) go to 60 + 40 mp1 = m + 1 + do 50 i = mp1,n,5 + dtemp = dtemp + dx(i)*dy(i) + dx(i + 1)*dy(i + 1) + + * dx(i + 2)*dy(i + 2) + dx(i + 3)*dy(i + 3) + dx(i + 4)*dy(i + 4) + 50 continue + 60 ddot = dtemp + return + end +*----------------------------------------------------------------------| + subroutine daxpy(n,da,dx,incx,dy,incy) +c +c constant times a vector plus a vector. +c uses unrolled loops for increments equal to one. +c jack dongarra, linpack, 3/11/78. +c + double precision dx(1),dy(1),da + integer i,incx,incy,ix,iy,m,mp1,n +c + if(n.le.0)return + if (da .eq. 0.0d0) return + if(incx.eq.1.and.incy.eq.1)go to 20 +c +c code for unequal increments or equal increments +c not equal to 1 +c + ix = 1 + iy = 1 + if(incx.lt.0)ix = (-n+1)*incx + 1 + if(incy.lt.0)iy = (-n+1)*incy + 1 + do 10 i = 1,n + dy(iy) = dy(iy) + da*dx(ix) + ix = ix + incx + iy = iy + incy + 10 continue + return +c +c code for both increments equal to 1 +c +c +c clean-up loop +c + 20 m = mod(n,4) + if( m .eq. 0 ) go to 40 + do 30 i = 1,m + dy(i) = dy(i) + da*dx(i) + 30 continue + if( n .lt. 4 ) return + 40 mp1 = m + 1 + do 50 i = mp1,n,4 + dy(i) = dy(i) + da*dx(i) + dy(i + 1) = dy(i + 1) + da*dx(i + 1) + dy(i + 2) = dy(i + 2) + da*dx(i + 2) + dy(i + 3) = dy(i + 3) + da*dx(i + 3) + 50 continue + return + end +*----------------------------------------------------------------------| + subroutine zswap (n,zx,incx,zy,incy) +c +c interchanges two vectors. +c jack dongarra, 3/11/78. +c + complex*16 zx(1),zy(1),ztemp +c + if(n.le.0)return + if(incx.eq.1.and.incy.eq.1)go to 20 +c +c code for unequal increments or equal increments not equal +c to 1 +c + ix = 1 + iy = 1 + if(incx.lt.0)ix = (-n+1)*incx + 1 + if(incy.lt.0)iy = (-n+1)*incy + 1 + do 10 i = 1,n + ztemp = zx(ix) + zx(ix) = zy(iy) + zy(iy) = ztemp + ix = ix + incx + iy = iy + incy + 10 continue + return +c +c code for both increments equal to 1 + 20 do 30 i = 1,n + ztemp = zx(i) + zx(i) = zy(i) + zy(i) = ztemp + 30 continue + return + end +*----------------------------------------------------------------------| + SUBROUTINE DGEMV ( TRANS, M, N, ALPHA, A, LDA, X, INCX, + $ BETA, Y, INCY ) +* .. Scalar Arguments .. + DOUBLE PRECISION ALPHA, BETA + INTEGER INCX, INCY, LDA, M, N + CHARACTER*1 TRANS +* .. Array Arguments .. + DOUBLE PRECISION A( LDA, * ), X( * ), Y( * ) +* .. +* +* Purpose +* ======= +* +* DGEMV performs one of the matrix-vector operations +* +* y := alpha*A*x + beta*y, or y := alpha*A'*x + beta*y, +* +* where alpha and beta are scalars, x and y are vectors and A is an +* m by n matrix. +* +* Parameters +* ========== +* +* TRANS - CHARACTER*1. +* On entry, TRANS specifies the operation to be performed as +* follows: +* +* TRANS = 'N' or 'n' y := alpha*A*x + beta*y. +* +* TRANS = 'T' or 't' y := alpha*A'*x + beta*y. +* +* TRANS = 'C' or 'c' y := alpha*A'*x + beta*y. +* +* Unchanged on exit. +* +* M - INTEGER. +* On entry, M specifies the number of rows of the matrix A. +* M must be at least zero. +* Unchanged on exit. +* +* N - INTEGER. +* On entry, N specifies the number of columns of the matrix A. +* N must be at least zero. +* Unchanged on exit. +* +* ALPHA - DOUBLE PRECISION. +* On entry, ALPHA specifies the scalar alpha. +* Unchanged on exit. +* +* A - DOUBLE PRECISION array of DIMENSION ( LDA, n ). +* Before entry, the leading m by n part of the array A must +* contain the matrix of coefficients. +* Unchanged on exit. +* +* LDA - INTEGER. +* On entry, LDA specifies the first dimension of A as declared +* in the calling (sub) program. LDA must be at least +* max( 1, m ). +* Unchanged on exit. +* +* X - DOUBLE PRECISION array of DIMENSION at least +* ( 1 + ( n - 1 )*abs( INCX ) ) when TRANS = 'N' or 'n' +* and at least +* ( 1 + ( m - 1 )*abs( INCX ) ) otherwise. +* Before entry, the incremented array X must contain the +* vector x. +* Unchanged on exit. +* +* INCX - INTEGER. +* On entry, INCX specifies the increment for the elements of +* X. INCX must not be zero. +* Unchanged on exit. +* +* BETA - DOUBLE PRECISION. +* On entry, BETA specifies the scalar beta. When BETA is +* supplied as zero then Y need not be set on input. +* Unchanged on exit. +* +* Y - DOUBLE PRECISION array of DIMENSION at least +* ( 1 + ( m - 1 )*abs( INCY ) ) when TRANS = 'N' or 'n' +* and at least +* ( 1 + ( n - 1 )*abs( INCY ) ) otherwise. +* Before entry with BETA non-zero, the incremented array Y +* must contain the vector y. On exit, Y is overwritten by the +* updated vector y. +* +* INCY - INTEGER. +* On entry, INCY specifies the increment for the elements of +* Y. INCY must not be zero. +* Unchanged on exit. +* +* +* Level 2 Blas routine. +* +* -- Written on 22-October-1986. +* Jack Dongarra, Argonne National Lab. +* Jeremy Du Croz, Nag Central Office. +* Sven Hammarling, Nag Central Office. +* Richard Hanson, Sandia National Labs. +* +* +* .. Parameters .. + DOUBLE PRECISION ONE , ZERO + PARAMETER ( ONE = 1.0D+0, ZERO = 0.0D+0 ) +* .. Local Scalars .. + DOUBLE PRECISION TEMP + INTEGER I, INFO, IX, IY, J, JX, JY, KX, KY, LENX, LENY +* .. External Functions .. + LOGICAL LSAME + EXTERNAL LSAME +* .. External Subroutines .. + EXTERNAL XERBLA +* .. Intrinsic Functions .. + INTRINSIC MAX +* .. +* .. Executable Statements .. +* +* Test the input parameters. +* + INFO = 0 + IF ( .NOT.LSAME( TRANS, 'N' ).AND. + $ .NOT.LSAME( TRANS, 'T' ).AND. + $ .NOT.LSAME( TRANS, 'C' ) )THEN + INFO = 1 + ELSE IF( M.LT.0 )THEN + INFO = 2 + ELSE IF( N.LT.0 )THEN + INFO = 3 + ELSE IF( LDA.LT.MAX( 1, M ) )THEN + INFO = 6 + ELSE IF( INCX.EQ.0 )THEN + INFO = 8 + ELSE IF( INCY.EQ.0 )THEN + INFO = 11 + END IF + IF( INFO.NE.0 )THEN + CALL XERBLA( 'DGEMV ', INFO ) + RETURN + END IF +* +* Quick return if possible. +* + IF( ( M.EQ.0 ).OR.( N.EQ.0 ).OR. + $ ( ( ALPHA.EQ.ZERO ).AND.( BETA.EQ.ONE ) ) ) + $ RETURN +* +* Set LENX and LENY, the lengths of the vectors x and y, and set +* up the start points in X and Y. +* + IF( LSAME( TRANS, 'N' ) )THEN + LENX = N + LENY = M + ELSE + LENX = M + LENY = N + END IF + IF( INCX.GT.0 )THEN + KX = 1 + ELSE + KX = 1 - ( LENX - 1 )*INCX + END IF + IF( INCY.GT.0 )THEN + KY = 1 + ELSE + KY = 1 - ( LENY - 1 )*INCY + END IF +* +* Start the operations. In this version the elements of A are +* accessed sequentially with one pass through A. +* +* First form y := beta*y. +* + IF( BETA.NE.ONE )THEN + IF( INCY.EQ.1 )THEN + IF( BETA.EQ.ZERO )THEN + DO 10, I = 1, LENY + Y( I ) = ZERO + 10 CONTINUE + ELSE + DO 20, I = 1, LENY + Y( I ) = BETA*Y( I ) + 20 CONTINUE + END IF + ELSE + IY = KY + IF( BETA.EQ.ZERO )THEN + DO 30, I = 1, LENY + Y( IY ) = ZERO + IY = IY + INCY + 30 CONTINUE + ELSE + DO 40, I = 1, LENY + Y( IY ) = BETA*Y( IY ) + IY = IY + INCY + 40 CONTINUE + END IF + END IF + END IF + IF( ALPHA.EQ.ZERO ) + $ RETURN + IF( LSAME( TRANS, 'N' ) )THEN +* +* Form y := alpha*A*x + y. +* + JX = KX + IF( INCY.EQ.1 )THEN + DO 60, J = 1, N + IF( X( JX ).NE.ZERO )THEN + TEMP = ALPHA*X( JX ) + DO 50, I = 1, M + Y( I ) = Y( I ) + TEMP*A( I, J ) + 50 CONTINUE + END IF + JX = JX + INCX + 60 CONTINUE + ELSE + DO 80, J = 1, N + IF( X( JX ).NE.ZERO )THEN + TEMP = ALPHA*X( JX ) + IY = KY + DO 70, I = 1, M + Y( IY ) = Y( IY ) + TEMP*A( I, J ) + IY = IY + INCY + 70 CONTINUE + END IF + JX = JX + INCX + 80 CONTINUE + END IF + ELSE +* +* Form y := alpha*A'*x + y. +* + JY = KY + IF( INCX.EQ.1 )THEN + DO 100, J = 1, N + TEMP = ZERO + DO 90, I = 1, M + TEMP = TEMP + A( I, J )*X( I ) + 90 CONTINUE + Y( JY ) = Y( JY ) + ALPHA*TEMP + JY = JY + INCY + 100 CONTINUE + ELSE + DO 120, J = 1, N + TEMP = ZERO + IX = KX + DO 110, I = 1, M + TEMP = TEMP + A( I, J )*X( IX ) + IX = IX + INCX + 110 CONTINUE + Y( JY ) = Y( JY ) + ALPHA*TEMP + JY = JY + INCY + 120 CONTINUE + END IF + END IF +* + RETURN +* +* End of DGEMV . +* + END +*----------------------------------------------------------------------| + SUBROUTINE DGEMM ( TRANSA, TRANSB, M, N, K, ALPHA, A, LDA, B, LDB, + $ BETA, C, LDC ) +* .. Scalar Arguments .. + CHARACTER*1 TRANSA, TRANSB + INTEGER M, N, K, LDA, LDB, LDC + DOUBLE PRECISION ALPHA, BETA +* .. Array Arguments .. + DOUBLE PRECISION A( LDA, * ), B( LDB, * ), C( LDC, * ) +* .. +* +* Purpose +* ======= +* +* DGEMM performs one of the matrix-matrix operations +* +* C := alpha*op( A )*op( B ) + beta*C, +* +* where op( X ) is one of +* +* op( X ) = X or op( X ) = X', +* +* alpha and beta are scalars, and A, B and C are matrices, with op( A ) +* an m by k matrix, op( B ) a k by n matrix and C an m by n matrix. +* +* Parameters +* ========== +* +* TRANSA - CHARACTER*1. +* On entry, TRANSA specifies the form of op( A ) to be used in +* the matrix multiplication as follows: +* +* TRANSA = 'N' or 'n', op( A ) = A. +* +* TRANSA = 'T' or 't', op( A ) = A'. +* +* TRANSA = 'C' or 'c', op( A ) = A'. +* +* Unchanged on exit. +* +* TRANSB - CHARACTER*1. +* On entry, TRANSB specifies the form of op( B ) to be used in +* the matrix multiplication as follows: +* +* TRANSB = 'N' or 'n', op( B ) = B. +* +* TRANSB = 'T' or 't', op( B ) = B'. +* +* TRANSB = 'C' or 'c', op( B ) = B'. +* +* Unchanged on exit. +* +* M - INTEGER. +* On entry, M specifies the number of rows of the matrix +* op( A ) and of the matrix C. M must be at least zero. +* Unchanged on exit. +* +* N - INTEGER. +* On entry, N specifies the number of columns of the matrix +* op( B ) and the number of columns of the matrix C. N must be +* at least zero. +* Unchanged on exit. +* +* K - INTEGER. +* On entry, K specifies the number of columns of the matrix +* op( A ) and the number of rows of the matrix op( B ). K must +* be at least zero. +* Unchanged on exit. +* +* ALPHA - DOUBLE PRECISION. +* On entry, ALPHA specifies the scalar alpha. +* Unchanged on exit. +* +* A - DOUBLE PRECISION array of DIMENSION ( LDA, ka ), where ka is +* k when TRANSA = 'N' or 'n', and is m otherwise. +* Before entry with TRANSA = 'N' or 'n', the leading m by k +* part of the array A must contain the matrix A, otherwise +* the leading k by m part of the array A must contain the +* matrix A. +* Unchanged on exit. +* +* LDA - INTEGER. +* On entry, LDA specifies the first dimension of A as declared +* in the calling (sub) program. When TRANSA = 'N' or 'n' then +* LDA must be at least max( 1, m ), otherwise LDA must be at +* least max( 1, k ). +* Unchanged on exit. +* +* B - DOUBLE PRECISION array of DIMENSION ( LDB, kb ), where kb is +* n when TRANSB = 'N' or 'n', and is k otherwise. +* Before entry with TRANSB = 'N' or 'n', the leading k by n +* part of the array B must contain the matrix B, otherwise +* the leading n by k part of the array B must contain the +* matrix B. +* Unchanged on exit. +* +* LDB - INTEGER. +* On entry, LDB specifies the first dimension of B as declared +* in the calling (sub) program. When TRANSB = 'N' or 'n' then +* LDB must be at least max( 1, k ), otherwise LDB must be at +* least max( 1, n ). +* Unchanged on exit. +* +* BETA - DOUBLE PRECISION. +* On entry, BETA specifies the scalar beta. When BETA is +* supplied as zero then C need not be set on input. +* Unchanged on exit. +* +* C - DOUBLE PRECISION array of DIMENSION ( LDC, n ). +* Before entry, the leading m by n part of the array C must +* contain the matrix C, except when beta is zero, in which +* case C need not be set on entry. +* On exit, the array C is overwritten by the m by n matrix +* ( alpha*op( A )*op( B ) + beta*C ). +* +* LDC - INTEGER. +* On entry, LDC specifies the first dimension of C as declared +* in the calling (sub) program. LDC must be at least +* max( 1, m ). +* Unchanged on exit. +* +* +* Level 3 Blas routine. +* +* -- Written on 8-February-1989. +* Jack Dongarra, Argonne National Laboratory. +* Iain Duff, AERE Harwell. +* Jeremy Du Croz, Numerical Algorithms Group Ltd. +* Sven Hammarling, Numerical Algorithms Group Ltd. +* +* +* .. External Functions .. + LOGICAL LSAME + EXTERNAL LSAME +* .. External Subroutines .. + EXTERNAL XERBLA +* .. Intrinsic Functions .. + INTRINSIC MAX +* .. Local Scalars .. + LOGICAL NOTA, NOTB + INTEGER I, INFO, J, L, NCOLA, NROWA, NROWB + DOUBLE PRECISION TEMP +* .. Parameters .. + DOUBLE PRECISION ONE , ZERO + PARAMETER ( ONE = 1.0D+0, ZERO = 0.0D+0 ) +* .. +* .. Executable Statements .. +* +* Set NOTA and NOTB as true if A and B respectively are not +* transposed and set NROWA, NCOLA and NROWB as the number of rows +* and columns of A and the number of rows of B respectively. +* + NOTA = LSAME( TRANSA, 'N' ) + NOTB = LSAME( TRANSB, 'N' ) + IF( NOTA )THEN + NROWA = M + NCOLA = K + ELSE + NROWA = K + NCOLA = M + END IF + IF( NOTB )THEN + NROWB = K + ELSE + NROWB = N + END IF +* +* Test the input parameters. +* + INFO = 0 + IF( ( .NOT.NOTA ).AND. + $ ( .NOT.LSAME( TRANSA, 'C' ) ).AND. + $ ( .NOT.LSAME( TRANSA, 'T' ) ) )THEN + INFO = 1 + ELSE IF( ( .NOT.NOTB ).AND. + $ ( .NOT.LSAME( TRANSB, 'C' ) ).AND. + $ ( .NOT.LSAME( TRANSB, 'T' ) ) )THEN + INFO = 2 + ELSE IF( M .LT.0 )THEN + INFO = 3 + ELSE IF( N .LT.0 )THEN + INFO = 4 + ELSE IF( K .LT.0 )THEN + INFO = 5 + ELSE IF( LDA.LT.MAX( 1, NROWA ) )THEN + INFO = 8 + ELSE IF( LDB.LT.MAX( 1, NROWB ) )THEN + INFO = 10 + ELSE IF( LDC.LT.MAX( 1, M ) )THEN + INFO = 13 + END IF + IF( INFO.NE.0 )THEN + CALL XERBLA( 'DGEMM ', INFO ) + RETURN + END IF +* +* Quick return if possible. +* + IF( ( M.EQ.0 ).OR.( N.EQ.0 ).OR. + $ ( ( ( ALPHA.EQ.ZERO ).OR.( K.EQ.0 ) ).AND.( BETA.EQ.ONE ) ) ) + $ RETURN +* +* And if alpha.eq.zero. +* + IF( ALPHA.EQ.ZERO )THEN + IF( BETA.EQ.ZERO )THEN + DO 20, J = 1, N + DO 10, I = 1, M + C( I, J ) = ZERO + 10 CONTINUE + 20 CONTINUE + ELSE + DO 40, J = 1, N + DO 30, I = 1, M + C( I, J ) = BETA*C( I, J ) + 30 CONTINUE + 40 CONTINUE + END IF + RETURN + END IF +* +* Start the operations. +* + IF( NOTB )THEN + IF( NOTA )THEN +* +* Form C := alpha*A*B + beta*C. +* + DO 90, J = 1, N + IF( BETA.EQ.ZERO )THEN + DO 50, I = 1, M + C( I, J ) = ZERO + 50 CONTINUE + ELSE IF( BETA.NE.ONE )THEN + DO 60, I = 1, M + C( I, J ) = BETA*C( I, J ) + 60 CONTINUE + END IF + DO 80, L = 1, K + IF( B( L, J ).NE.ZERO )THEN + TEMP = ALPHA*B( L, J ) + DO 70, I = 1, M + C( I, J ) = C( I, J ) + TEMP*A( I, L ) + 70 CONTINUE + END IF + 80 CONTINUE + 90 CONTINUE + ELSE +* +* Form C := alpha*A'*B + beta*C +* + DO 120, J = 1, N + DO 110, I = 1, M + TEMP = ZERO + DO 100, L = 1, K + TEMP = TEMP + A( L, I )*B( L, J ) + 100 CONTINUE + IF( BETA.EQ.ZERO )THEN + C( I, J ) = ALPHA*TEMP + ELSE + C( I, J ) = ALPHA*TEMP + BETA*C( I, J ) + END IF + 110 CONTINUE + 120 CONTINUE + END IF + ELSE + IF( NOTA )THEN +* +* Form C := alpha*A*B' + beta*C +* + DO 170, J = 1, N + IF( BETA.EQ.ZERO )THEN + DO 130, I = 1, M + C( I, J ) = ZERO + 130 CONTINUE + ELSE IF( BETA.NE.ONE )THEN + DO 140, I = 1, M + C( I, J ) = BETA*C( I, J ) + 140 CONTINUE + END IF + DO 160, L = 1, K + IF( B( J, L ).NE.ZERO )THEN + TEMP = ALPHA*B( J, L ) + DO 150, I = 1, M + C( I, J ) = C( I, J ) + TEMP*A( I, L ) + 150 CONTINUE + END IF + 160 CONTINUE + 170 CONTINUE + ELSE +* +* Form C := alpha*A'*B' + beta*C +* + DO 200, J = 1, N + DO 190, I = 1, M + TEMP = ZERO + DO 180, L = 1, K + TEMP = TEMP + A( L, I )*B( J, L ) + 180 CONTINUE + IF( BETA.EQ.ZERO )THEN + C( I, J ) = ALPHA*TEMP + ELSE + C( I, J ) = ALPHA*TEMP + BETA*C( I, J ) + END IF + 190 CONTINUE + 200 CONTINUE + END IF + END IF +* + RETURN +* +* End of DGEMM . +* + END +*----------------------------------------------------------------------| +* +************************************************************************ +* +* File of the COMPLEX*16 Level-2 BLAS. +* ========================================== +* +* SUBROUTINE ZGEMV ( TRANS, M, N, ALPHA, A, LDA, X, INCX, +* $ BETA, Y, INCY ) +* +* SUBROUTINE ZGBMV ( TRANS, M, N, KL, KU, ALPHA, A, LDA, X, INCX, +* $ BETA, Y, INCY ) +* +* SUBROUTINE ZHEMV ( UPLO, N, ALPHA, A, LDA, X, INCX, +* $ BETA, Y, INCY ) +* +* SUBROUTINE ZHBMV ( UPLO, N, K, ALPHA, A, LDA, X, INCX, +* $ BETA, Y, INCY ) +* +* SUBROUTINE ZHPMV ( UPLO, N, ALPHA, AP, X, INCX, BETA, Y, INCY ) +* +* SUBROUTINE ZTRMV ( UPLO, TRANS, DIAG, N, A, LDA, X, INCX ) +* +* SUBROUTINE ZTBMV ( UPLO, TRANS, DIAG, N, K, A, LDA, X, INCX ) +* +* SUBROUTINE ZTPMV ( UPLO, TRANS, DIAG, N, AP, X, INCX ) +* +* SUBROUTINE ZTRSV ( UPLO, TRANS, DIAG, N, A, LDA, X, INCX ) +* +* SUBROUTINE ZTBSV ( UPLO, TRANS, DIAG, N, K, A, LDA, X, INCX ) +* +* SUBROUTINE ZTPSV ( UPLO, TRANS, DIAG, N, AP, X, INCX ) +* +* SUBROUTINE ZGERU ( M, N, ALPHA, X, INCX, Y, INCY, A, LDA ) +* +* SUBROUTINE ZGERC ( M, N, ALPHA, X, INCX, Y, INCY, A, LDA ) +* +* SUBROUTINE ZHER ( UPLO, N, ALPHA, X, INCX, A, LDA ) +* +* SUBROUTINE ZHPR ( UPLO, N, ALPHA, X, INCX, AP ) +* +* SUBROUTINE ZHER2 ( UPLO, N, ALPHA, X, INCX, Y, INCY, A, LDA ) +* +* SUBROUTINE ZHPR2 ( UPLO, N, ALPHA, X, INCX, Y, INCY, AP ) +* +* See: +* +* Dongarra J. J., Du Croz J. J., Hammarling S. and Hanson R. J.. +* An extended set of Fortran Basic Linear Algebra Subprograms. +* +* Technical Memoranda Nos. 41 (revision 3) and 81, Mathematics +* and Computer Science Division, Argonne National Laboratory, +* 9700 South Cass Avenue, Argonne, Illinois 60439, US. +* +* Or +* +* NAG Technical Reports TR3/87 and TR4/87, Numerical Algorithms +* Group Ltd., NAG Central Office, 256 Banbury Road, Oxford +* OX2 7DE, UK, and Numerical Algorithms Group Inc., 1101 31st +* Street, Suite 100, Downers Grove, Illinois 60515-1263, USA. +* +************************************************************************ +* + SUBROUTINE ZGEMV ( TRANS, M, N, ALPHA, A, LDA, X, INCX, + $ BETA, Y, INCY ) +* .. Scalar Arguments .. + COMPLEX*16 ALPHA, BETA + INTEGER INCX, INCY, LDA, M, N + CHARACTER*1 TRANS +* .. Array Arguments .. + COMPLEX*16 A( LDA, * ), X( * ), Y( * ) +* .. +* +* Purpose +* ======= +* +* ZGEMV performs one of the matrix-vector operations +* +* y := alpha*A*x + beta*y, or y := alpha*A'*x + beta*y, or +* +* y := alpha*conjg( A' )*x + beta*y, +* +* where alpha and beta are scalars, x and y are vectors and A is an +* m by n matrix. +* +* Parameters +* ========== +* +* TRANS - CHARACTER*1. +* On entry, TRANS specifies the operation to be performed as +* follows: +* +* TRANS = 'N' or 'n' y := alpha*A*x + beta*y. +* +* TRANS = 'T' or 't' y := alpha*A'*x + beta*y. +* +* TRANS = 'C' or 'c' y := alpha*conjg( A' )*x + beta*y. +* +* Unchanged on exit. +* +* M - INTEGER. +* On entry, M specifies the number of rows of the matrix A. +* M must be at least zero. +* Unchanged on exit. +* +* N - INTEGER. +* On entry, N specifies the number of columns of the matrix A. +* N must be at least zero. +* Unchanged on exit. +* +* ALPHA - COMPLEX*16 . +* On entry, ALPHA specifies the scalar alpha. +* Unchanged on exit. +* +* A - COMPLEX*16 array of DIMENSION ( LDA, n ). +* Before entry, the leading m by n part of the array A must +* contain the matrix of coefficients. +* Unchanged on exit. +* +* LDA - INTEGER. +* On entry, LDA specifies the first dimension of A as declared +* in the calling (sub) program. LDA must be at least +* max( 1, m ). +* Unchanged on exit. +* +* X - COMPLEX*16 array of DIMENSION at least +* ( 1 + ( n - 1 )*abs( INCX ) ) when TRANS = 'N' or 'n' +* and at least +* ( 1 + ( m - 1 )*abs( INCX ) ) otherwise. +* Before entry, the incremented array X must contain the +* vector x. +* Unchanged on exit. +* +* INCX - INTEGER. +* On entry, INCX specifies the increment for the elements of +* X. INCX must not be zero. +* Unchanged on exit. +* +* BETA - COMPLEX*16 . +* On entry, BETA specifies the scalar beta. When BETA is +* supplied as zero then Y need not be set on input. +* Unchanged on exit. +* +* Y - COMPLEX*16 array of DIMENSION at least +* ( 1 + ( m - 1 )*abs( INCY ) ) when TRANS = 'N' or 'n' +* and at least +* ( 1 + ( n - 1 )*abs( INCY ) ) otherwise. +* Before entry with BETA non-zero, the incremented array Y +* must contain the vector y. On exit, Y is overwritten by the +* updated vector y. +* +* INCY - INTEGER. +* On entry, INCY specifies the increment for the elements of +* Y. INCY must not be zero. +* Unchanged on exit. +* +* +* Level 2 Blas routine. +* +* -- Written on 22-October-1986. +* Jack Dongarra, Argonne National Lab. +* Jeremy Du Croz, Nag Central Office. +* Sven Hammarling, Nag Central Office. +* Richard Hanson, Sandia National Labs. +* +* +* .. Parameters .. + COMPLEX*16 ONE + PARAMETER ( ONE = ( 1.0D+0, 0.0D+0 ) ) + COMPLEX*16 ZERO + PARAMETER ( ZERO = ( 0.0D+0, 0.0D+0 ) ) +* .. Local Scalars .. + COMPLEX*16 TEMP + INTEGER I, INFO, IX, IY, J, JX, JY, KX, KY, LENX, LENY + LOGICAL NOCONJ +* .. External Functions .. + LOGICAL LSAME + EXTERNAL LSAME +* .. External Subroutines .. + EXTERNAL XERBLA +* .. Intrinsic Functions .. + INTRINSIC DCONJG, MAX +* .. +* .. Executable Statements .. +* +* Test the input parameters. +* + INFO = 0 + IF ( .NOT.LSAME( TRANS, 'N' ).AND. + $ .NOT.LSAME( TRANS, 'T' ).AND. + $ .NOT.LSAME( TRANS, 'C' ) )THEN + INFO = 1 + ELSE IF( M.LT.0 )THEN + INFO = 2 + ELSE IF( N.LT.0 )THEN + INFO = 3 + ELSE IF( LDA.LT.MAX( 1, M ) )THEN + INFO = 6 + ELSE IF( INCX.EQ.0 )THEN + INFO = 8 + ELSE IF( INCY.EQ.0 )THEN + INFO = 11 + END IF + IF( INFO.NE.0 )THEN + CALL XERBLA( 'ZGEMV ', INFO ) + RETURN + END IF +* +* Quick return if possible. +* + IF( ( M.EQ.0 ).OR.( N.EQ.0 ).OR. + $ ( ( ALPHA.EQ.ZERO ).AND.( BETA.EQ.ONE ) ) ) + $ RETURN +* + NOCONJ = LSAME( TRANS, 'T' ) +* +* Set LENX and LENY, the lengths of the vectors x and y, and set +* up the start points in X and Y. +* + IF( LSAME( TRANS, 'N' ) )THEN + LENX = N + LENY = M + ELSE + LENX = M + LENY = N + END IF + IF( INCX.GT.0 )THEN + KX = 1 + ELSE + KX = 1 - ( LENX - 1 )*INCX + END IF + IF( INCY.GT.0 )THEN + KY = 1 + ELSE + KY = 1 - ( LENY - 1 )*INCY + END IF +* +* Start the operations. In this version the elements of A are +* accessed sequentially with one pass through A. +* +* First form y := beta*y. +* + IF( BETA.NE.ONE )THEN + IF( INCY.EQ.1 )THEN + IF( BETA.EQ.ZERO )THEN + DO 10, I = 1, LENY + Y( I ) = ZERO + 10 CONTINUE + ELSE + DO 20, I = 1, LENY + Y( I ) = BETA*Y( I ) + 20 CONTINUE + END IF + ELSE + IY = KY + IF( BETA.EQ.ZERO )THEN + DO 30, I = 1, LENY + Y( IY ) = ZERO + IY = IY + INCY + 30 CONTINUE + ELSE + DO 40, I = 1, LENY + Y( IY ) = BETA*Y( IY ) + IY = IY + INCY + 40 CONTINUE + END IF + END IF + END IF + IF( ALPHA.EQ.ZERO ) + $ RETURN + IF( LSAME( TRANS, 'N' ) )THEN +* +* Form y := alpha*A*x + y. +* + JX = KX + IF( INCY.EQ.1 )THEN + DO 60, J = 1, N + IF( X( JX ).NE.ZERO )THEN + TEMP = ALPHA*X( JX ) + DO 50, I = 1, M + Y( I ) = Y( I ) + TEMP*A( I, J ) + 50 CONTINUE + END IF + JX = JX + INCX + 60 CONTINUE + ELSE + DO 80, J = 1, N + IF( X( JX ).NE.ZERO )THEN + TEMP = ALPHA*X( JX ) + IY = KY + DO 70, I = 1, M + Y( IY ) = Y( IY ) + TEMP*A( I, J ) + IY = IY + INCY + 70 CONTINUE + END IF + JX = JX + INCX + 80 CONTINUE + END IF + ELSE +* +* Form y := alpha*A'*x + y or y := alpha*conjg( A' )*x + y. +* + JY = KY + IF( INCX.EQ.1 )THEN + DO 110, J = 1, N + TEMP = ZERO + IF( NOCONJ )THEN + DO 90, I = 1, M + TEMP = TEMP + A( I, J )*X( I ) + 90 CONTINUE + ELSE + DO 100, I = 1, M + TEMP = TEMP + DCONJG( A( I, J ) )*X( I ) + 100 CONTINUE + END IF + Y( JY ) = Y( JY ) + ALPHA*TEMP + JY = JY + INCY + 110 CONTINUE + ELSE + DO 140, J = 1, N + TEMP = ZERO + IX = KX + IF( NOCONJ )THEN + DO 120, I = 1, M + TEMP = TEMP + A( I, J )*X( IX ) + IX = IX + INCX + 120 CONTINUE + ELSE + DO 130, I = 1, M + TEMP = TEMP + DCONJG( A( I, J ) )*X( IX ) + IX = IX + INCX + 130 CONTINUE + END IF + Y( JY ) = Y( JY ) + ALPHA*TEMP + JY = JY + INCY + 140 CONTINUE + END IF + END IF +* + RETURN +* +* End of ZGEMV . +* + END + subroutine zcopy(n,zx,incx,zy,incy) +c +c copies a vector, x, to a vector, y. +c jack dongarra, linpack, 4/11/78. +c + double complex zx(1),zy(1) + integer i,incx,incy,ix,iy,n +c + if(n.le.0)return + if(incx.eq.1.and.incy.eq.1)go to 20 +c +c code for unequal increments or equal increments +c not equal to 1 +c + ix = 1 + iy = 1 + if(incx.lt.0)ix = (-n+1)*incx + 1 + if(incy.lt.0)iy = (-n+1)*incy + 1 + do 10 i = 1,n + zy(iy) = zx(ix) + ix = ix + incx + iy = iy + incy + 10 continue + return +c +c code for both increments equal to 1 +c + 20 do 30 i = 1,n + zy(i) = zx(i) + 30 continue + return + end + double precision function dznrm2( n, zx, incx) + logical imag, scale + integer i, incx, ix, n, next + double precision cutlo, cuthi, hitest, sum, xmax, absx, zero, one + double complex zx(1) + double precision dreal,dimag + double complex zdumr,zdumi + dreal(zdumr) = zdumr + dimag(zdumi) = (0.0d0,-1.0d0)*zdumi + data zero, one /0.0d0, 1.0d0/ +c +c unitary norm of the complex n-vector stored in zx() with storage +c increment incx . +c if n .le. 0 return with result = 0. +c if n .ge. 1 then incx must be .ge. 1 +c +c c.l.lawson , 1978 jan 08 +c modified 3/93 to return if incx .le. 0. +c +c four phase method using two built-in constants that are +c hopefully applicable to all machines. +c cutlo = maximum of sqrt(u/eps) over all known machines. +c cuthi = minimum of sqrt(v) over all known machines. +c where +c eps = smallest no. such that eps + 1. .gt. 1. +c u = smallest positive no. (underflow limit) +c v = largest no. (overflow limit) +c +c brief outline of algorithm.. +c +c phase 1 scans zero components. +c move to phase 2 when a component is nonzero and .le. cutlo +c move to phase 3 when a component is .gt. cutlo +c move to phase 4 when a component is .ge. cuthi/m +c where m = n for x() real and m = 2*n for complex. +c +c values for cutlo and cuthi.. +c from the environmental parameters listed in the imsl converter +c document the limiting values are as follows.. +c cutlo, s.p. u/eps = 2**(-102) for honeywell. close seconds are +c univac and dec at 2**(-103) +c thus cutlo = 2**(-51) = 4.44089e-16 +c cuthi, s.p. v = 2**127 for univac, honeywell, and dec. +c thus cuthi = 2**(63.5) = 1.30438e19 +c cutlo, d.p. u/eps = 2**(-67) for honeywell and dec. +c thus cutlo = 2**(-33.5) = 8.23181d-11 +c cuthi, d.p. same as s.p. cuthi = 1.30438d19 +c data cutlo, cuthi / 8.232d-11, 1.304d19 / +c data cutlo, cuthi / 4.441e-16, 1.304e19 / + data cutlo, cuthi / 8.232d-11, 1.304d19 / +c + if(n .gt. 0 .and. incx.gt.0) go to 10 + dznrm2 = zero + go to 300 +c + 10 assign 30 to next + sum = zero + i = 1 +c begin main loop + do 220 ix = 1,n + absx = dabs(dreal(zx(i))) + imag = .false. + go to next,(30, 50, 70, 90, 110) + 30 if( absx .gt. cutlo) go to 85 + assign 50 to next + scale = .false. +c +c phase 1. sum is zero +c + 50 if( absx .eq. zero) go to 200 + if( absx .gt. cutlo) go to 85 +c +c prepare for phase 2. + assign 70 to next + go to 105 +c +c prepare for phase 4. +c + 100 assign 110 to next + sum = (sum / absx) / absx + 105 scale = .true. + xmax = absx + go to 115 +c +c phase 2. sum is small. +c scale to avoid destructive underflow. +c + 70 if( absx .gt. cutlo ) go to 75 +c +c common code for phases 2 and 4. +c in phase 4 sum is large. scale to avoid overflow. +c + 110 if( absx .le. xmax ) go to 115 + sum = one + sum * (xmax / absx)**2 + xmax = absx + go to 200 +c + 115 sum = sum + (absx/xmax)**2 + go to 200 +c +c +c prepare for phase 3. +c + 75 sum = (sum * xmax) * xmax +c + 85 assign 90 to next + scale = .false. +c +c for real or d.p. set hitest = cuthi/n +c for complex set hitest = cuthi/(2*n) +c + hitest = cuthi/dble( 2*n ) +c +c phase 3. sum is mid-range. no scaling. +c + 90 if(absx .ge. hitest) go to 100 + sum = sum + absx**2 + 200 continue +c control selection of real and imaginary parts. +c + if(imag) go to 210 + absx = dabs(dimag(zx(i))) + imag = .true. + go to next,( 50, 70, 90, 110 ) +c + 210 continue + i = i + incx + 220 continue +c +c end of main loop. +c compute square root and adjust for scaling. +c + dznrm2 = dsqrt(sum) + if(scale) dznrm2 = dznrm2 * xmax + 300 continue + return + end +* +************************************************************************ +* +* File of the COMPLEX*16 Level-3 BLAS. +* ========================================== +* +* SUBROUTINE ZGEMM ( TRANSA, TRANSB, M, N, K, ALPHA, A, LDA, B, LDB, +* $ BETA, C, LDC ) +* +* SUBROUTINE ZSYMM ( SIDE, UPLO, M, N, ALPHA, A, LDA, B, LDB, +* $ BETA, C, LDC ) +* +* SUBROUTINE ZHEMM ( SIDE, UPLO, M, N, ALPHA, A, LDA, B, LDB, +* $ BETA, C, LDC ) +* +* SUBROUTINE ZSYRK ( UPLO, TRANS, N, K, ALPHA, A, LDA, +* $ BETA, C, LDC ) +* +* SUBROUTINE ZHERK ( UPLO, TRANS, N, K, ALPHA, A, LDA, +* $ BETA, C, LDC ) +* +* SUBROUTINE ZSYR2K( UPLO, TRANS, N, K, ALPHA, A, LDA, B, LDB, +* $ BETA, C, LDC ) +* +* SUBROUTINE ZHER2K( UPLO, TRANS, N, K, ALPHA, A, LDA, B, LDB, +* $ BETA, C, LDC ) +* +* SUBROUTINE ZTRMM ( SIDE, UPLO, TRANSA, DIAG, M, N, ALPHA, A, LDA, +* $ B, LDB ) +* +* SUBROUTINE ZTRSM ( SIDE, UPLO, TRANSA, DIAG, M, N, ALPHA, A, LDA, +* $ B, LDB ) +* +* See: +* +* Dongarra J. J., Du Croz J. J., Duff I. and Hammarling S. +* A set of Level 3 Basic Linear Algebra Subprograms. Technical +* Memorandum No.88 (Revision 1), Mathematics and Computer Science +* Division, Argonne National Laboratory, 9700 South Cass Avenue, +* Argonne, Illinois 60439. +* +* +************************************************************************ +* + SUBROUTINE ZGEMM ( TRANSA, TRANSB, M, N, K, ALPHA, A, LDA, B, LDB, + $ BETA, C, LDC ) +* .. Scalar Arguments .. + CHARACTER*1 TRANSA, TRANSB + INTEGER M, N, K, LDA, LDB, LDC + COMPLEX*16 ALPHA, BETA +* .. Array Arguments .. + COMPLEX*16 A( LDA, * ), B( LDB, * ), C( LDC, * ) +* .. +* +* Purpose +* ======= +* +* ZGEMM performs one of the matrix-matrix operations +* +* C := alpha*op( A )*op( B ) + beta*C, +* +* where op( X ) is one of +* +* op( X ) = X or op( X ) = X' or op( X ) = conjg( X' ), +* +* alpha and beta are scalars, and A, B and C are matrices, with op( A ) +* an m by k matrix, op( B ) a k by n matrix and C an m by n matrix. +* +* Parameters +* ========== +* +* TRANSA - CHARACTER*1. +* On entry, TRANSA specifies the form of op( A ) to be used in +* the matrix multiplication as follows: +* +* TRANSA = 'N' or 'n', op( A ) = A. +* +* TRANSA = 'T' or 't', op( A ) = A'. +* +* TRANSA = 'C' or 'c', op( A ) = conjg( A' ). +* +* Unchanged on exit. +* +* TRANSB - CHARACTER*1. +* On entry, TRANSB specifies the form of op( B ) to be used in +* the matrix multiplication as follows: +* +* TRANSB = 'N' or 'n', op( B ) = B. +* +* TRANSB = 'T' or 't', op( B ) = B'. +* +* TRANSB = 'C' or 'c', op( B ) = conjg( B' ). +* +* Unchanged on exit. +* +* M - INTEGER. +* On entry, M specifies the number of rows of the matrix +* op( A ) and of the matrix C. M must be at least zero. +* Unchanged on exit. +* +* N - INTEGER. +* On entry, N specifies the number of columns of the matrix +* op( B ) and the number of columns of the matrix C. N must be +* at least zero. +* Unchanged on exit. +* +* K - INTEGER. +* On entry, K specifies the number of columns of the matrix +* op( A ) and the number of rows of the matrix op( B ). K must +* be at least zero. +* Unchanged on exit. +* +* ALPHA - COMPLEX*16 . +* On entry, ALPHA specifies the scalar alpha. +* Unchanged on exit. +* +* A - COMPLEX*16 array of DIMENSION ( LDA, ka ), where ka is +* k when TRANSA = 'N' or 'n', and is m otherwise. +* Before entry with TRANSA = 'N' or 'n', the leading m by k +* part of the array A must contain the matrix A, otherwise +* the leading k by m part of the array A must contain the +* matrix A. +* Unchanged on exit. +* +* LDA - INTEGER. +* On entry, LDA specifies the first dimension of A as declared +* in the calling (sub) program. When TRANSA = 'N' or 'n' then +* LDA must be at least max( 1, m ), otherwise LDA must be at +* least max( 1, k ). +* Unchanged on exit. +* +* B - COMPLEX*16 array of DIMENSION ( LDB, kb ), where kb is +* n when TRANSB = 'N' or 'n', and is k otherwise. +* Before entry with TRANSB = 'N' or 'n', the leading k by n +* part of the array B must contain the matrix B, otherwise +* the leading n by k part of the array B must contain the +* matrix B. +* Unchanged on exit. +* +* LDB - INTEGER. +* On entry, LDB specifies the first dimension of B as declared +* in the calling (sub) program. When TRANSB = 'N' or 'n' then +* LDB must be at least max( 1, k ), otherwise LDB must be at +* least max( 1, n ). +* Unchanged on exit. +* +* BETA - COMPLEX*16 . +* On entry, BETA specifies the scalar beta. When BETA is +* supplied as zero then C need not be set on input. +* Unchanged on exit. +* +* C - COMPLEX*16 array of DIMENSION ( LDC, n ). +* Before entry, the leading m by n part of the array C must +* contain the matrix C, except when beta is zero, in which +* case C need not be set on entry. +* On exit, the array C is overwritten by the m by n matrix +* ( alpha*op( A )*op( B ) + beta*C ). +* +* LDC - INTEGER. +* On entry, LDC specifies the first dimension of C as declared +* in the calling (sub) program. LDC must be at least +* max( 1, m ). +* Unchanged on exit. +* +* +* Level 3 Blas routine. +* +* -- Written on 8-February-1989. +* Jack Dongarra, Argonne National Laboratory. +* Iain Duff, AERE Harwell. +* Jeremy Du Croz, Numerical Algorithms Group Ltd. +* Sven Hammarling, Numerical Algorithms Group Ltd. +* +* +* .. External Functions .. + LOGICAL LSAME + EXTERNAL LSAME +* .. External Subroutines .. + EXTERNAL XERBLA +* .. Intrinsic Functions .. + INTRINSIC DCONJG, MAX +* .. Local Scalars .. + LOGICAL CONJA, CONJB, NOTA, NOTB + INTEGER I, INFO, J, L, NCOLA, NROWA, NROWB + COMPLEX*16 TEMP +* .. Parameters .. + COMPLEX*16 ONE + PARAMETER ( ONE = ( 1.0D+0, 0.0D+0 ) ) + COMPLEX*16 ZERO + PARAMETER ( ZERO = ( 0.0D+0, 0.0D+0 ) ) +* .. +* .. Executable Statements .. +* +* Set NOTA and NOTB as true if A and B respectively are not +* conjugated or transposed, set CONJA and CONJB as true if A and +* B respectively are to be transposed but not conjugated and set +* NROWA, NCOLA and NROWB as the number of rows and columns of A +* and the number of rows of B respectively. +* + NOTA = LSAME( TRANSA, 'N' ) + NOTB = LSAME( TRANSB, 'N' ) + CONJA = LSAME( TRANSA, 'C' ) + CONJB = LSAME( TRANSB, 'C' ) + IF( NOTA )THEN + NROWA = M + NCOLA = K + ELSE + NROWA = K + NCOLA = M + END IF + IF( NOTB )THEN + NROWB = K + ELSE + NROWB = N + END IF +* +* Test the input parameters. +* + INFO = 0 + IF( ( .NOT.NOTA ).AND. + $ ( .NOT.CONJA ).AND. + $ ( .NOT.LSAME( TRANSA, 'T' ) ) )THEN + INFO = 1 + ELSE IF( ( .NOT.NOTB ).AND. + $ ( .NOT.CONJB ).AND. + $ ( .NOT.LSAME( TRANSB, 'T' ) ) )THEN + INFO = 2 + ELSE IF( M .LT.0 )THEN + INFO = 3 + ELSE IF( N .LT.0 )THEN + INFO = 4 + ELSE IF( K .LT.0 )THEN + INFO = 5 + ELSE IF( LDA.LT.MAX( 1, NROWA ) )THEN + INFO = 8 + ELSE IF( LDB.LT.MAX( 1, NROWB ) )THEN + INFO = 10 + ELSE IF( LDC.LT.MAX( 1, M ) )THEN + INFO = 13 + END IF + IF( INFO.NE.0 )THEN + CALL XERBLA( 'ZGEMM ', INFO ) + RETURN + END IF +* +* Quick return if possible. +* + IF( ( M.EQ.0 ).OR.( N.EQ.0 ).OR. + $ ( ( ( ALPHA.EQ.ZERO ).OR.( K.EQ.0 ) ).AND.( BETA.EQ.ONE ) ) ) + $ RETURN +* +* And when alpha.eq.zero. +* + IF( ALPHA.EQ.ZERO )THEN + IF( BETA.EQ.ZERO )THEN + DO 20, J = 1, N + DO 10, I = 1, M + C( I, J ) = ZERO + 10 CONTINUE + 20 CONTINUE + ELSE + DO 40, J = 1, N + DO 30, I = 1, M + C( I, J ) = BETA*C( I, J ) + 30 CONTINUE + 40 CONTINUE + END IF + RETURN + END IF +* +* Start the operations. +* + IF( NOTB )THEN + IF( NOTA )THEN +* +* Form C := alpha*A*B + beta*C. +* + DO 90, J = 1, N + IF( BETA.EQ.ZERO )THEN + DO 50, I = 1, M + C( I, J ) = ZERO + 50 CONTINUE + ELSE IF( BETA.NE.ONE )THEN + DO 60, I = 1, M + C( I, J ) = BETA*C( I, J ) + 60 CONTINUE + END IF + DO 80, L = 1, K + IF( B( L, J ).NE.ZERO )THEN + TEMP = ALPHA*B( L, J ) + DO 70, I = 1, M + C( I, J ) = C( I, J ) + TEMP*A( I, L ) + 70 CONTINUE + END IF + 80 CONTINUE + 90 CONTINUE + ELSE IF( CONJA )THEN +* +* Form C := alpha*conjg( A' )*B + beta*C. +* + DO 120, J = 1, N + DO 110, I = 1, M + TEMP = ZERO + DO 100, L = 1, K + TEMP = TEMP + DCONJG( A( L, I ) )*B( L, J ) + 100 CONTINUE + IF( BETA.EQ.ZERO )THEN + C( I, J ) = ALPHA*TEMP + ELSE + C( I, J ) = ALPHA*TEMP + BETA*C( I, J ) + END IF + 110 CONTINUE + 120 CONTINUE + ELSE +* +* Form C := alpha*A'*B + beta*C +* + DO 150, J = 1, N + DO 140, I = 1, M + TEMP = ZERO + DO 130, L = 1, K + TEMP = TEMP + A( L, I )*B( L, J ) + 130 CONTINUE + IF( BETA.EQ.ZERO )THEN + C( I, J ) = ALPHA*TEMP + ELSE + C( I, J ) = ALPHA*TEMP + BETA*C( I, J ) + END IF + 140 CONTINUE + 150 CONTINUE + END IF + ELSE IF( NOTA )THEN + IF( CONJB )THEN +* +* Form C := alpha*A*conjg( B' ) + beta*C. +* + DO 200, J = 1, N + IF( BETA.EQ.ZERO )THEN + DO 160, I = 1, M + C( I, J ) = ZERO + 160 CONTINUE + ELSE IF( BETA.NE.ONE )THEN + DO 170, I = 1, M + C( I, J ) = BETA*C( I, J ) + 170 CONTINUE + END IF + DO 190, L = 1, K + IF( B( J, L ).NE.ZERO )THEN + TEMP = ALPHA*DCONJG( B( J, L ) ) + DO 180, I = 1, M + C( I, J ) = C( I, J ) + TEMP*A( I, L ) + 180 CONTINUE + END IF + 190 CONTINUE + 200 CONTINUE + ELSE +* +* Form C := alpha*A*B' + beta*C +* + DO 250, J = 1, N + IF( BETA.EQ.ZERO )THEN + DO 210, I = 1, M + C( I, J ) = ZERO + 210 CONTINUE + ELSE IF( BETA.NE.ONE )THEN + DO 220, I = 1, M + C( I, J ) = BETA*C( I, J ) + 220 CONTINUE + END IF + DO 240, L = 1, K + IF( B( J, L ).NE.ZERO )THEN + TEMP = ALPHA*B( J, L ) + DO 230, I = 1, M + C( I, J ) = C( I, J ) + TEMP*A( I, L ) + 230 CONTINUE + END IF + 240 CONTINUE + 250 CONTINUE + END IF + ELSE IF( CONJA )THEN + IF( CONJB )THEN +* +* Form C := alpha*conjg( A' )*conjg( B' ) + beta*C. +* + DO 280, J = 1, N + DO 270, I = 1, M + TEMP = ZERO + DO 260, L = 1, K + TEMP = TEMP + + $ DCONJG( A( L, I ) )*DCONJG( B( J, L ) ) + 260 CONTINUE + IF( BETA.EQ.ZERO )THEN + C( I, J ) = ALPHA*TEMP + ELSE + C( I, J ) = ALPHA*TEMP + BETA*C( I, J ) + END IF + 270 CONTINUE + 280 CONTINUE + ELSE +* +* Form C := alpha*conjg( A' )*B' + beta*C +* + DO 310, J = 1, N + DO 300, I = 1, M + TEMP = ZERO + DO 290, L = 1, K + TEMP = TEMP + DCONJG( A( L, I ) )*B( J, L ) + 290 CONTINUE + IF( BETA.EQ.ZERO )THEN + C( I, J ) = ALPHA*TEMP + ELSE + C( I, J ) = ALPHA*TEMP + BETA*C( I, J ) + END IF + 300 CONTINUE + 310 CONTINUE + END IF + ELSE + IF( CONJB )THEN +* +* Form C := alpha*A'*conjg( B' ) + beta*C +* + DO 340, J = 1, N + DO 330, I = 1, M + TEMP = ZERO + DO 320, L = 1, K + TEMP = TEMP + A( L, I )*DCONJG( B( J, L ) ) + 320 CONTINUE + IF( BETA.EQ.ZERO )THEN + C( I, J ) = ALPHA*TEMP + ELSE + C( I, J ) = ALPHA*TEMP + BETA*C( I, J ) + END IF + 330 CONTINUE + 340 CONTINUE + ELSE +* +* Form C := alpha*A'*B' + beta*C +* + DO 370, J = 1, N + DO 360, I = 1, M + TEMP = ZERO + DO 350, L = 1, K + TEMP = TEMP + A( L, I )*B( J, L ) + 350 CONTINUE + IF( BETA.EQ.ZERO )THEN + C( I, J ) = ALPHA*TEMP + ELSE + C( I, J ) = ALPHA*TEMP + BETA*C( I, J ) + END IF + 360 CONTINUE + 370 CONTINUE + END IF + END IF +* + RETURN +* +* End of ZGEMM . +* + END + double complex function zdotc(n,zx,incx,zy,incy) +c +c forms the dot product of a vector. +c jack dongarra, 3/11/78. +c + double complex zx(1),zy(1),ztemp + ztemp = (0.0d0,0.0d0) + zdotc = (0.0d0,0.0d0) + if(n.le.0)return + if(incx.eq.1.and.incy.eq.1)go to 20 +c +c code for unequal increments or equal increments +c not equal to 1 +c + ix = 1 + iy = 1 + if(incx.lt.0)ix = (-n+1)*incx + 1 + if(incy.lt.0)iy = (-n+1)*incy + 1 + do 10 i = 1,n + ztemp = ztemp + dconjg(zx(ix))*zy(iy) + ix = ix + incx + iy = iy + incy + 10 continue + zdotc = ztemp + return +c +c code for both increments equal to 1 +c + 20 do 30 i = 1,n + ztemp = ztemp + dconjg(zx(i))*zy(i) + 30 continue + zdotc = ztemp + return + end + subroutine zdscal(n,da,zx,incx) +c +c scales a vector by a constant. +c jack dongarra, 3/11/78. +c modified 3/93 to return if incx .le. 0. +c + double complex zx(1) + double precision da + integer i,incx,ix,n +c + if( n.le.0 .or. incx.le.0 )return + if(incx.eq.1)go to 20 +c +c code for increment not equal to 1 +c + ix = 1 + do 10 i = 1,n + zx(ix) = dcmplx(da,0.0d0)*zx(ix) + ix = ix + incx + 10 continue + return +c +c code for increment equal to 1 +c + 20 do 30 i = 1,n + zx(i) = dcmplx(da,0.0d0)*zx(i) + 30 continue + return + end + subroutine dswap (n,dx,incx,dy,incy) +c +c interchanges two vectors. +c uses unrolled loops for increments equal one. +c jack dongarra, linpack, 3/11/78. +c + double precision dx(1),dy(1),dtemp + integer i,incx,incy,ix,iy,m,mp1,n +c + if(n.le.0)return + if(incx.eq.1.and.incy.eq.1)go to 20 +c +c code for unequal increments or equal increments not equal +c to 1 +c + ix = 1 + iy = 1 + if(incx.lt.0)ix = (-n+1)*incx + 1 + if(incy.lt.0)iy = (-n+1)*incy + 1 + do 10 i = 1,n + dtemp = dx(ix) + dx(ix) = dy(iy) + dy(iy) = dtemp + ix = ix + incx + iy = iy + incy + 10 continue + return +c +c code for both increments equal to 1 +c +c +c clean-up loop +c + 20 m = mod(n,3) + if( m .eq. 0 ) go to 40 + do 30 i = 1,m + dtemp = dx(i) + dx(i) = dy(i) + dy(i) = dtemp + 30 continue + if( n .lt. 3 ) return + 40 mp1 = m + 1 + do 50 i = mp1,n,3 + dtemp = dx(i) + dx(i) = dy(i) + dy(i) = dtemp + dtemp = dx(i + 1) + dx(i + 1) = dy(i + 1) + dy(i + 1) = dtemp + dtemp = dx(i + 2) + dx(i + 2) = dy(i + 2) + dy(i + 2) = dtemp + 50 continue + return + end + integer function izamax(n,zx,incx) +c +c finds the index of element having max. absolute value. +c jack dongarra, 1/15/85. +c modified 3/93 to return if incx .le. 0. +c + double complex zx(1) + double precision smax + integer i,incx,ix,n + double precision dcabs1 +c + izamax = 0 + if( n.lt.1 .or. incx.le.0 )return + izamax = 1 + if(n.eq.1)return + if(incx.eq.1)go to 20 +c +c code for increment not equal to 1 +c + ix = 1 + smax = dcabs1(zx(1)) + ix = ix + incx + do 10 i = 2,n + if(dcabs1(zx(ix)).le.smax) go to 5 + izamax = i + smax = dcabs1(zx(ix)) + 5 ix = ix + incx + 10 continue + return +c +c code for increment equal to 1 +c + 20 smax = dcabs1(zx(1)) + do 30 i = 2,n + if(dcabs1(zx(i)).le.smax) go to 30 + izamax = i + smax = dcabs1(zx(i)) + 30 continue + return + end + subroutine zscal(n,za,zx,incx) +c +c scales a vector by a constant. +c jack dongarra, 3/11/78. +c modified 3/93 to return if incx .le. 0. +c + double complex za,zx(1) + integer i,incx,ix,n +c + if( n.le.0 .or. incx.le.0 )return + if(incx.eq.1)go to 20 +c +c code for increment not equal to 1 +c + ix = 1 + do 10 i = 1,n + zx(ix) = za*zx(ix) + ix = ix + incx + 10 continue + return +c +c code for increment equal to 1 +c + 20 do 30 i = 1,n + zx(i) = za*zx(i) + 30 continue + return + end + double complex function zdotu(n,zx,incx,zy,incy) +c +c forms the dot product of a vector. +c jack dongarra, 3/11/78. +c + double complex zx(1),zy(1),ztemp + ztemp = (0.0d0,0.0d0) + zdotu = (0.0d0,0.0d0) + if(n.le.0)return + if(incx.eq.1.and.incy.eq.1)go to 20 +c +c code for unequal increments or equal increments +c not equal to 1 +c + ix = 1 + iy = 1 + if(incx.lt.0)ix = (-n+1)*incx + 1 + if(incy.lt.0)iy = (-n+1)*incy + 1 + do 10 i = 1,n + ztemp = ztemp + zx(ix)*zy(iy) + ix = ix + incx + iy = iy + incy + 10 continue + zdotu = ztemp + return +c +c code for both increments equal to 1 +c + 20 do 30 i = 1,n + ztemp = ztemp + zx(i)*zy(i) + 30 continue + zdotu = ztemp + return + end diff --git a/src/branch_segment.cpp b/src/branch_segment.cpp new file mode 100644 index 0000000..42d035c --- /dev/null +++ b/src/branch_segment.cpp @@ -0,0 +1,67 @@ +#include + +#include "branch_segment.h" +#include "rate_model.h" + + +BranchSegment::BranchSegment(double dur, int per):duration(dur), period(per), + model(nullptr), fossilareaindices(std::vector()), startdistint(-666), + distconds(nullptr), ancdistconds(nullptr) {} + + +void BranchSegment::setModel (RateModel * mod) { + model = mod; +} + + +/*void BranchSegment::setStartDist (std::vector sd) { + startdist = sd; +}*/ + + +void BranchSegment::clearStartDist () { + //startdist.clear(); + set_start_dist_int(-666); //null is -666 +} + + +double BranchSegment::getDuration () const { + return duration; +} + + +int BranchSegment::getPeriod () const { + return period; +} + + +/* +vector BranchSegment::getStartDist () const { + return startdist; +}*/ + + +void BranchSegment::set_start_dist_int (int d) { + startdistint = d; +} + + +int BranchSegment::get_start_dist_int () const { + return startdistint; +} + + +RateModel * BranchSegment::getModel () const { + return model; +} + + +std::vector BranchSegment::getFossilAreas () const { + return fossilareaindices; +} + + +// not used +void BranchSegment::setFossilArea (int area) { + fossilareaindices.push_back(area); +} diff --git a/src/branch_segment.h b/src/branch_segment.h new file mode 100644 index 0000000..53661bb --- /dev/null +++ b/src/branch_segment.h @@ -0,0 +1,41 @@ +#ifndef PX_BRANCH_SEGMENT_H +#define PX_BRANCH_SEGMENT_H + +#include + +class RateModel; + +#include "vector_node_object.h" +#include "superdouble.h" + + +class BranchSegment { +private: + double duration; + int period; + RateModel * model; + std::vector fossilareaindices; + int startdistint; + +public: + BranchSegment (double dur, int per); + void setModel (RateModel * mod); + //void setStartDist (std::vector sd); + void clearStartDist (); + double getDuration () const; + int getPeriod () const; + //std::vector getStartDist() const; + void set_start_dist_int (int d); + int get_start_dist_int () const; + RateModel * getModel () const; + std::vector getFossilAreas () const; + void setFossilArea(int area); + std::vector * distconds; + std::vector alphas; // alpha for the entire branch -- stored in the 0th segment for anc calc + std::vector seg_sp_alphas; // alpha for this specific segment, stored for the stoch map + std::vector seg_sp_stoch_map_revB_time; //segment specific rev B, combining the tempA and the ENLT + std::vector seg_sp_stoch_map_revB_number; //segment specific rev B, combining the tempA and the ENLT + std::vector * ancdistconds;//for ancestral state reconstructions +}; + +#endif /* PX_BRANCH_SEGMENT_H */ diff --git a/src/citations.cpp b/src/citations.cpp new file mode 100644 index 0000000..ecd1c72 --- /dev/null +++ b/src/citations.cpp @@ -0,0 +1,27 @@ +#include +#include "citations.h" + +// put citations for various methods here. + +std::string get_phyx_citation () { + std::string cite = "Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. "; + cite += "Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. "; + cite += "https://doi.org/10.1093/bioinformatics/btx063"; + return cite; +} + +std::string get_NW_citation () { + std::string cite = "Needleman, Saul B., and Christian D. Wunsch. 1970. "; + cite += "A general method applicable to the search for similarities in the amino acid sequence of two proteins. "; + cite += "Journal of Molecular Biology. 48 (3): 443–53. "; + cite += "https://doi.org/10.1016/0022-2836(70)90057-4"; + return cite; +} + +std::string get_SW_citation () { + std::string cite = "Smith, Temple F., and Michael S. Waterman. 1981. "; + cite += "Identification of Common Molecular Subsequences. "; + cite += "Journal of Molecular Biology. 147 (1): 195–197. "; + cite += "https://doi.org/10.1016/0022-2836(81)90087-5"; + return cite; +} diff --git a/src/citations.h b/src/citations.h new file mode 100644 index 0000000..daa7ea6 --- /dev/null +++ b/src/citations.h @@ -0,0 +1,12 @@ +#ifndef PX_CITATIONS_H +#define PX_CITATIONS_H + +#include + +// a place to put citations for the various methods + +std::string get_phyx_citation (); +std::string get_NW_citation (); +std::string get_SW_citation (); + +#endif /* PX_CITATIONS_H */ diff --git a/src/clean_seq.cpp b/src/clean_seq.cpp new file mode 100644 index 0000000..c394625 --- /dev/null +++ b/src/clean_seq.cpp @@ -0,0 +1,270 @@ +#include +#include +#include +#include + +#include "clean_seq.h" +#include "sequence.h" +#include "seq_reader.h" +#include "seq_utils.h" +#include "utils.h" + + +SequenceCleaner::SequenceCleaner (std::istream* pios, double& prop_required, + const bool& by_taxon, const bool& by_codon, const bool& count_only, + const bool& verbose):num_taxa_(0u), num_char_(0u), num_retained_(0u), + missing_allowed_(1.0 - prop_required), by_taxon_(by_taxon), + by_codon_(by_codon), count_only_(count_only), verbose_(verbose) { + read_in_sequences(pios); + count_missing(); + if (!count_only_) { + generate_cleaned_sequences(); + } +} + + +void SequenceCleaner::read_in_sequences (std::istream* pios) { + seqs_ = ingest_alignment(pios, alpha_name_); + num_taxa_ = static_cast(seqs_.size()); + + // check aligned. if not, BAIL + bool aligned = is_aligned(seqs_); + if (!aligned) { + std::cerr << "Error: sequences are not aligned. Exiting." << std::endl; + exit(0); + } + + // if codons, length must be a multiple of 3 + if (by_codon_) { + if (!is_codon_alignment(seqs_)) { + std::cerr << "Error: sequences do not appear to be codons (i.e., length a multiple of 3). Exiting." + << std::endl; + exit(1); + } + if (alpha_name_ != "DNA") { + std::cerr << "Error: codon alignments require DNA data type, but '" + << alpha_name_ << "' detected. Exiting." << std::endl; + exit(1); + } + } + + num_char_ = seqs_[0].get_length(); + set_bad_chars(); // uses alpha name +} + + +void SequenceCleaner::set_bad_chars () { + if (alpha_name_ == "DNA") { + badChars_ = "N-?"; + } else if (alpha_name_ == "AA") { + badChars_ = "X-?"; + } else if (alpha_name_ == "BINARY" || alpha_name_ == "MULTI") { + badChars_ = "-?"; + } else { + std::cerr << "Error: cannot determine alignment type. Exiting." << std::endl; + exit(0); + } +} + + +std::vector SequenceCleaner::get_cleaned_seqs () const { + return cleaned_seqs_; +} + + +void SequenceCleaner::write_seqs (std::ostream* poos) { + if (by_taxon_) { + for (unsigned int i = 0; i < num_taxa_; i++) { + if (missing_per_taxon_proportion_[i] < missing_allowed_) { + (*poos) << ">" << seqs_[i].get_id() << std::endl; + (*poos) << seqs_[i].get_sequence() << std::endl; + } + } + } else { + for (unsigned int i = 0; i < num_taxa_; i++) { + std::string seq = cleaned_seqs_[i].get_sequence(); + if (seq.find_first_not_of(badChars_) != std::string::npos) { + (*poos) << ">" << cleaned_seqs_[i].get_id() << std::endl; + (*poos) << cleaned_seqs_[i].get_sequence() << std::endl; + } else { + // rare case where removal of sites leaves only missing data for a taxon + if (verbose_) { + std::cerr << "Taxon '" << cleaned_seqs_[i].get_id() + << "' consists only of missing characters. Removing." << std::endl; + } + } + } + } +} + + + +// TODO: divide by 3 if codons +void SequenceCleaner::write_stats (std::ostream* poos) { + const int colWidth = 12; + if (by_taxon_) { + if (!by_codon_) { + (*poos) << "Length of sequences: " << num_char_ << " characters" << std::endl; + } else { + (*poos) << "Length of sequences: " << num_char_/3 << " codons" << std::endl; + } + + std::string pad; + unsigned int longest = get_longest_taxon_label(); + // header + (*poos) << "Taxon" << std::string((longest - 5), ' '); + (*poos) << " " << std::right << std::setw(colWidth) + << "Missing" << " " << std::right << std::setw(colWidth) + << "Prop." << std::endl; + (*poos) << std::string((longest + 26), '-') << std::endl; + for (unsigned int i = 0; i < num_taxa_; i++) { + (*poos) << seqs_[i].get_id(); + auto diff = longest - seqs_[i].get_id().size(); + if (diff > 0) { + pad = std::string(diff, ' '); + (*poos) << pad; + } + if (!by_codon_) { + (*poos) << " " << std::right << std::setw(colWidth) + << missing_per_taxon_[i] << " " << std::right << std::setw(colWidth) + << missing_per_taxon_proportion_[i] << std::endl; + } else { + (*poos) << " " << std::right << std::setw(colWidth) + << missing_per_taxon_[i]/3 << " " << std::right << std::setw(colWidth) + << missing_per_taxon_proportion_[i] << std::endl; + } + + } + } else { + (*poos) << "Number of sequences: " << num_taxa_ << std::endl; + if (!by_codon_) { + (*poos) << std::right << std::setw(9) << "Character" << " " + << std::right << std::setw(colWidth) << "Missing" << " " + << std::right << std::setw(colWidth) << "Prop." << std::endl; + (*poos) << std::string(35, '-') << std::endl; + for (unsigned int i = 0; i < num_char_; i++) { + (*poos) << std::right << std::setw(9) << i << " " + << std::right << std::setw(colWidth) << missing_per_site_counts_[i] << " " + << std::right << std::setw(colWidth) << missing_per_site_proportion_[i] << " " + << std::endl; + } + } else { + (*poos) << std::right << std::setw(5) << "Codon" << " " + << std::right << std::setw(colWidth) << "Missing" << " " + << std::right << std::setw(colWidth) << "Prop." << std::endl; + (*poos) << std::string(34, '-') << std::endl; + for (unsigned int i = 0; i < (num_char_/3); i++) { + unsigned int pos = i * 3; + (*poos) << std::right << std::setw(5) << i << " " + << std::right << std::setw(colWidth) << missing_per_site_counts_[pos] << " " + << std::right << std::setw(colWidth) << missing_per_site_proportion_[pos] << " " + << std::endl; + } + } + } +} + + +// get the longest label. for printing purposes +unsigned int SequenceCleaner::get_longest_taxon_label () { + unsigned int longest = 0; + for (unsigned int i = 0; i < num_taxa_; i++) { + unsigned int curLength = static_cast(seqs_[i].get_id().size()); + if (curLength > longest) { + longest = curLength; + } + } + return longest; +} + + +// hrm should we create a new set of seqs, or just edit existing one? +void SequenceCleaner::generate_cleaned_sequences () { + std::string name; + std::string seq_string; + Sequence orig_seq; + for (unsigned int i = 0; i < num_taxa_; i++) { + Sequence new_seq; + orig_seq = seqs_[i]; + name = orig_seq.get_id(); + if (num_retained_ > 0) { + seq_string = get_cleaned_seq(orig_seq.get_sequence()); + } else { + seq_string = "-"; // for when all sites are removed + } + new_seq.set_id(name); + new_seq.set_sequence(seq_string); + cleaned_seqs_.push_back(new_seq); + } +} + +// counts both per-site and per-taxon missing characters +// TODO: need to consider codon seqs +void SequenceCleaner::count_missing () { + // initialize empty vectors + missing_per_site_counts_ = std::vector(num_char_, 0); + missing_per_site_proportion_ = std::vector(num_char_, 0.0); + missing_per_taxon_ = std::vector(num_taxa_, 0); + missing_per_taxon_proportion_ = std::vector(num_taxa_, 0.0); + + std::string seq_string; + + if (!by_codon_) { + for (unsigned int i = 0; i < num_taxa_; i++) { + seq_string = string_to_upper(seqs_[i].get_sequence()); + for (unsigned int j = 0; j < num_char_; j++) { + if (badChars_.find(seq_string[j]) != std::string::npos) { + missing_per_site_counts_[j]++; + missing_per_taxon_[i]++; + //std::cout << " BAD CHAR (" << seq_string[j] << ")!" << std::endl; + } + } + missing_per_taxon_proportion_[i] = static_cast(missing_per_taxon_[i]) + / static_cast(num_char_); + } + } else { + std::string codon; + for (unsigned int i = 0; i < num_taxa_; i++) { + seq_string = string_to_upper(seqs_[i].get_sequence()); + for (unsigned int j = 0; j < num_char_; j += 3) { + codon = seq_string.substr(j, 3); + if (codon.find_first_of(badChars_) != std::string::npos) { + // if any char is bad, they all are + // counts are still stored per site, not per codon + missing_per_site_counts_[j]++; + missing_per_site_counts_[j+1]++; + missing_per_site_counts_[j+2]++; + missing_per_taxon_[i] += 3; + // std::cout << " BAD CODON (" << codon << ")!" << std::endl; + } + } + missing_per_taxon_proportion_[i] = static_cast(missing_per_taxon_[i]) + / static_cast(num_char_); + } + } + + // get proportions + for (unsigned int i = 0; i < num_char_; i++) { + missing_per_site_proportion_[i] = static_cast(missing_per_site_counts_[i]) + / static_cast(num_taxa_); + //std::cout << i << ". missing = " << missing_per_site_counts_[i] << "(" + // << missing_per_site_proportion_[i] << ")" << std::endl; + if (missing_per_site_proportion_[i] <= missing_allowed_) { + retained_sites_.push_back(i); + } + } + + num_retained_ = static_cast(retained_sites_.size()); +} + + +std::string SequenceCleaner::get_cleaned_seq (const std::string& origseq) const { + std::string seq; + for (unsigned int i = 0; i < num_retained_; i++) { + seq += origseq[retained_sites_[i]]; + } + return seq; +} + + +SequenceCleaner::~SequenceCleaner() = default; diff --git a/src/clean_seq.h b/src/clean_seq.h new file mode 100644 index 0000000..08991b3 --- /dev/null +++ b/src/clean_seq.h @@ -0,0 +1,51 @@ +#ifndef PX_CLSQ_H +#define PX_CLSQ_H + +#include +#include +#include + +#include "sequence.h" + +class SequenceCleaner { +private: + unsigned int num_taxa_; + unsigned int num_char_; + unsigned int num_retained_; + double missing_allowed_; + + bool by_taxon_; + bool by_codon_; + bool count_only_; + bool verbose_; + + std::string badChars_; + std::string alpha_name_; + + // refactored version + std::vector seqs_; + std::vector cleaned_seqs_; + std::vector missing_per_site_counts_; + std::vector missing_per_site_proportion_; + std::vector missing_per_taxon_; + std::vector missing_per_taxon_proportion_; + std::vector retained_sites_; + + void count_missing (); + void generate_cleaned_sequences (); + std::string get_cleaned_seq (const std::string& origseq) const; + unsigned int get_longest_taxon_label (); + void read_in_sequences (std::istream* pios); + void set_bad_chars (); + +public: + SequenceCleaner (std::istream* pios, double& prop_required, + const bool& by_taxon, const bool& by_codon, const bool& count_only, + const bool& verbose); + std::vector get_cleaned_seqs () const; // not used, but available + void write_seqs (std::ostream* poos); + void write_stats (std::ostream* poos); + virtual ~SequenceCleaner (); +}; + +#endif /* PX_CLSQ_H */ diff --git a/src/clean_tree.cpp b/src/clean_tree.cpp new file mode 100644 index 0000000..75b3ca2 --- /dev/null +++ b/src/clean_tree.cpp @@ -0,0 +1,38 @@ +#include "tree.h" +#include "node.h" +#include "tree_utils.h" +#include "clean_tree.h" + + +CleanTree::CleanTree (Tree * intree, bool remove_root_edge, bool remove_labels, + bool remove_knuckles) { + tree_ = intree; + root_ = tree_->getRoot(); + remove_root_edge_ = remove_root_edge; + remove_labels_ = remove_labels; + remove_knuckles_ = remove_knuckles; + clean_properties(); +} + +// remove annotations, 'knuckles', and root edges +void CleanTree::clean_properties () { + if (remove_labels_) { + if (tree_->hasNodeAnnotations()) { + //cout << "Found node annotations!" << endl; + remove_annotations(tree_); + } + if (tree_->hasNodeNames()) { + //cout << "Found node names!" << endl; + remove_internal_names(tree_); + } + } + if (remove_knuckles_) { + deknuckle_tree(tree_); + } + if (remove_root_edge_) { + if (has_root_edge(tree_)) { + //cout << "Tree has a root edge." << endl; + tree_->removeRootEdge(); + } + } +} diff --git a/src/clean_tree.h b/src/clean_tree.h new file mode 100644 index 0000000..a2b5a32 --- /dev/null +++ b/src/clean_tree.h @@ -0,0 +1,27 @@ +#ifndef PX_CL_TR_H +#define PX_CL_TR_H + +class Tree; // forward declaration +class Node; // forward declaration + +class CleanTree { +private: + Tree* tree_; + Node * root_; + + // the following are not currently being used + //bool rooted_tree_; + //bool ultrametric_tree_; + //bool binary_tree_; + //bool has_branchlengths_; + bool remove_root_edge_; + bool remove_labels_; + bool remove_knuckles_; + void clean_properties (); + +public: + CleanTree (Tree * intree, bool remove_root_edge, bool remove_labels, + bool remove_knuckles); +}; + +#endif /* PX_CL_TR_H */ diff --git a/src/clock.f b/src/clock.f new file mode 100644 index 0000000..7698bb6 --- /dev/null +++ b/src/clock.f @@ -0,0 +1,22 @@ +*--- Utility timer routine (seconds). +*--- uncomment the appropriate one and comment the others + +*--- SUN & SGI -- + double precision function clock() + real*4 etime, tm(2) + clock = etime( tm ) + end + +*--- IBM & CRAY -- +* double precision function clock() +* real*8 timef +* clock = 1000.0d0 * timef() +* end + +*--- others ?? + + +*--- if in trouble, use this to get out of the hook! +* double precision function clock() +* clock = 0.0d0 +* end diff --git a/src/collapse_tree.cpp b/src/collapse_tree.cpp new file mode 100644 index 0000000..502766b --- /dev/null +++ b/src/collapse_tree.cpp @@ -0,0 +1,97 @@ +#include +#include +#include /* rint */ + +#include "tree.h" +#include "tree_utils.h" +#include "collapse_tree.h" +#include "utils.h" +#include "node.h" + + +Collapser::Collapser (const double& threshold):scale_set_(false),has_labels_(false), + has_annotations_(false) { + threshold_ = threshold; +} + + +void Collapser::set_sup_string (const std::string& str) { + sup_string_ = str; +} + + +/* +need to consider both node `names' _and_ `comments' +former can be newick or Nexus, latter are only Nexus (e.g. BEAST) +- annotations have certain strings identifying support: + - 'posterior=', 'prob=', 'label=' +*/ +void Collapser::collapse_edges (Tree * tr) { + has_labels_ = tr->hasNodeNames(); + has_annotations_ = tr->hasNodeAnnotations(); + //bool isRooted = is_rooted(tr); // should be useful + // cout << "isRooted: " << isRooted << std::endl; + if (!tr->hasNodeAnnotations()) { + //std::cout << "Dude. No annotations found in this tree. What are you even _doing_?!?" << std::endl; + } + if (!tr->hasNodeNames()) { + //std::cout << "Dude. No node names found in this tree. What are you even _doing_?!?" << std::endl; + } else { + // if a node is removed, start over anew since root is reprocessed + // should check if this is necessary, since could be expensive for large trees + bool done = false; + int loop_count = 0; + while (!done) { + loop_count++; + //std::cout << "Loop #" << loop_count << ". There are " << tr->getInternalNodeCount() + // << " internal nodes to consider." << std::endl; + for (unsigned int i = 0; i < tr->getInternalNodeCount(); i++) { + Node * m = tr->getInternalNode(i); + std::string str = m->getName(); + if (str.empty()) { + //std::cout << "Whoops. This node has no support value." << std::endl; + } else { + double cursup = std::stod(str); + if (!scale_set_) { + guess_scale(cursup); + } + if (cursup < threshold_) { + //std::cout << "Welp. This one has got to go (" << cursup << "); el = " + // << m->getBL() << std::endl; + tr->pruneInternalNode(m); + break; + } + //std::cout << "This one is cool: " << cursup << "; el = " << m->getBL() << std::endl; + } + if (i == (tr->getInternalNodeCount() - 1)) { + done = true; // exit loop, no more polytomies remain + } + } + } + //std::cout << "Went through loop " << loop_count << " times." << std::endl; + } +} + + +/* +need to consider ranges: +1) 0-100 (e.g., bootstraps) +2) 0.0-1.0 (probs) +- hrm: currently take the 'first' support value encountered. + - could a tree have both support values above and below 1? + - e.g. 74.3 and 0.9 + - let us assume: no! + - therefore, no need for rintf +*/ +// using a support value (the first encountered), determine whether scale is proportions or percentages +// if appropriate will reset threshold (e.g. from 0.5 to 50) +void Collapser::guess_scale (const double& sup) { + if (sup > 1.0) { // overkill + //std::cout << "Ok, looks like a percentage here guys." << std::endl; + threshold_ *= 100; + //std::cout << "New threshold set to " << threshold_ << std::endl; + } else { + //std::cout << "Ok, looks like a proportion (probability?)." << std::endl; + } + scale_set_ = true; +} diff --git a/src/collapse_tree.h b/src/collapse_tree.h new file mode 100644 index 0000000..4db60b9 --- /dev/null +++ b/src/collapse_tree.h @@ -0,0 +1,36 @@ +#ifndef PX_COLLAPSE_TREE_H +#define PX_COLLAPSE_TREE_H + +#include + +class Tree; // forward declaration + +/* +so the way i have this set up is for the class to only involve +setting up the collapsing scenario (e.g. threshold). +in other words, the tree is not a member of the class. +rather, a tree (or trees) can be thrown at it and processed. +assumes that all trees in a file have same support scale (seems reasonable) +this seems better to me, rather than multiple (identical) +class construction/destruction operations. +idunno. maybe this is not best. +*/ + +class Collapser { +private: + double threshold_; + std::string sup_string_; // string identifying support value within an annotation + + bool scale_set_; + bool has_labels_; + bool has_annotations_; + + void guess_scale (const double& sup); + +public: + explicit Collapser (const double& threshold); + void set_sup_string (const std::string& str); + void collapse_edges (Tree * tr); +}; + +#endif /* PX_COLLAPSE_TREE_H */ diff --git a/src/comp_test.cpp b/src/comp_test.cpp new file mode 100644 index 0000000..1e60d6f --- /dev/null +++ b/src/comp_test.cpp @@ -0,0 +1,232 @@ +#include +#include +#include +#include +#include +#include + +#include "comp_test.h" +#include "utils.h" +#include "sequence.h" +#include "seq_reader.h" +#include "seq_utils.h" + + +CompTest::CompTest (std::istream* pios, std::ostream* poos):num_taxa_(0u), seq_length_(0u), + total_(0u), df_(0u), test_stat_(0.0), prob_(0.0), seq_chars_(""), alpha_name_(""), + alpha_set_(false), datatype_set_(false), is_multi_(false), gap_('-'), missing_('?'), + pios_(pios), poos_(poos), longest_tax_label_(0) { + read_in_alignment(); + count_chars(); + calc_chi_square(); +} + + +void CompTest::read_in_alignment () { + seqs_ = ingest_alignment(pios_, alpha_name_); + + if (!is_aligned(seqs_)) { + std::cerr << "Error: sequences must be aligned. Exiting." << std::endl; + exit(0); + } + + num_taxa_ = static_cast(seqs_.size()); + seq_length_ = seqs_[0].get_length(); + set_datatype(); + + // if datatype is multi, but alphabet not set, get from entire concatenated sequence + if (is_multi_ && !alpha_set_) { + // grab all unique characters from the input string + // here, seqs from all individuals are concatenated, so represents all sampled characters + std::string concatenated; + for (unsigned int i = 0; i < num_taxa_; i++) { + concatenated += seqs_[static_cast(i)].get_sequence(); + } + seq_chars_ = get_alphabet_from_sequence(concatenated); + // remove gap and missing (if present) + seq_chars_.erase(std::remove(seq_chars_.begin(), seq_chars_.end(), gap_), seq_chars_.end()); + seq_chars_.erase(std::remove(seq_chars_.begin(), seq_chars_.end(), missing_), seq_chars_.end()); + alpha_set_ = true; + } + + // resize + col_totals_.resize(seq_chars_.size(), 0); + taxon_labels_ = collect_names(seqs_); +} + + +void CompTest::set_datatype () { + if (alpha_name_ == "DNA") { + seq_chars_ = "ACGT"; + alpha_set_ = true; + } else if (alpha_name_ == "AA") { + seq_chars_ = "ACDEFGHIKLMNPQRSTVWYX"; + alpha_set_ = true; + } else if (alpha_name_ == "BINARY") { + seq_chars_ = "01"; + alpha_set_ = true; + } else if (alpha_name_ == "MULTI") { + is_multi_ = true; + // alphabet is either 1) supplied (nexus) or 2) comes from entire alignment + } else { + std::cerr << "Error: cannot determine alignment type. Exiting." << std::endl; + exit(0); + } + datatype_set_ = true; +} + + +// get counts of all valid character states per taxon +void CompTest::count_chars () { + std::string seq; + for (unsigned int i = 0; i < num_taxa_; i++) { + unsigned int sum = 0; + seq = string_to_upper(seqs_[static_cast(i)].get_sequence()); + std::vector icounts(seq_chars_.length(), 0); + + for (unsigned int j = 0; j < seq_chars_.length(); j++) { + auto num = static_cast(std::count(seq.begin(), seq.end(), seq_chars_[j])); + icounts[j] += num; + sum += num; + col_totals_[j] += num; + } + indiv_char_counts_.push_back(icounts); + // row totals need to be all the same. if not, could be: + // 1. if not aligned - this is checked + // 2. missing chars (-, ?, ambig) which are not yet supported here + row_totals_.push_back(sum); + total_ += sum; + } + // checking row totals + if (!all_equal(row_totals_)) { + std::cerr << "Error: missing/ambiguous characters not currently supported. Exiting." + << std::endl; + exit(0); + } +} + + +// get the longest label. for printing purposes +void CompTest::get_longest_taxon_label () { + longest_tax_label_ = 0; + for (unsigned int i = 0; i < num_taxa_; i++) { + auto cur_len = static_cast(taxon_labels_[static_cast(i)].size()); + if (cur_len > longest_tax_label_) { + longest_tax_label_ = cur_len; + } + } +} + + +void CompTest::return_freq_table () { + const int colWidth = 12; + // need to take into account longest_tax_label_ + get_longest_taxon_label(); + std::string pad = std::string(longest_tax_label_, ' '); + // header + (*poos_) << "Observed character counts:" << std::endl; + (*poos_) << pad << " "; + for (char seq_char : seq_chars_) { + (*poos_) << std::right << std::setw(colWidth) << seq_char << " "; + } + (*poos_) << std::right << std::setw(colWidth) << "Nchar" << std::endl; + for (size_t i = 0; i < static_cast(num_taxa_); i++) { + unsigned int diff = longest_tax_label_ - static_cast(taxon_labels_[i].size()); + (*poos_) << taxon_labels_[i]; + if (diff > 0) { + pad = std::string(diff, ' '); + (*poos_) << pad; + } + (*poos_) << " "; + for (unsigned int j = 0; j < seq_chars_.length(); j++) { + (*poos_) << std::right << std::setw(colWidth) << indiv_char_counts_[i][j] << " "; + } + (*poos_) << std::right << std::setw(colWidth) << row_totals_[i] << std::endl; + } + unsigned int diff = longest_tax_label_ - 5; + pad = std::string(diff, ' '); + (*poos_) << "Total" << pad << " "; + for (unsigned int col_total : col_totals_) { + (*poos_) << std::right << std::setw(colWidth) << col_total << " "; + } + (*poos_) << std::right << std::setw(colWidth) << total_ << std::endl; +} + + +void CompTest::calc_chi_square () { + test_stat_ = 0.0; + df_ = static_cast((num_taxa_ - 1) * (col_totals_.size() - 1)); + double observed = 0.0; + double expected = 0.0; + double cellv = 0.0; + for (size_t i = 0; i < static_cast(num_taxa_); i++) { + for (size_t j = 0; j < col_totals_.size(); j++) { + observed = static_cast(indiv_char_counts_[i][j]); + expected = static_cast(col_totals_[j]) * static_cast(row_totals_[i]) + / static_cast(total_); + cellv = get_cell_value(observed, expected); + test_stat_ += cellv; + } + } + prob_ = calc_chi_square_prob(df_, test_stat_); +} + +void CompTest::print_results () { + return_freq_table(); + (*poos_) << "chi-square test stat. = " << test_stat_ << std::endl; + (*poos_) << "df = " << df_ << std::endl; + (*poos_) << "prob = " << prob_ << std::endl; +} + +// A chi square distribution with n degrees of freedom is equal to +// a gamma distribution with a = n / 2 and b = 0.5 (or β = 2). +// s = df/2, t = chi2/2 +double CompTest::calc_chi_square_prob (const double& df, const double& xstat) { + // prob given by igf(df/2, x/2) / gamma(df/2) + double s = df / 2; + double t = xstat / 2; + double prob = lower_incomplete_gamma_function(s, t); + prob /= tgamma(s); // from cmath + prob = 1 - prob; + return prob; +} + + +double CompTest::get_cell_value (const double& observed, + const double& expected) const { + double res = pow((observed - expected), 2.0) / expected; + return res; +} + + +// https://en.wikipedia.org/wiki/Chi-squared_distribution#Cumulative_distribution_function +// s is df/2, t is chi-sq.stat/2 +double CompTest::lower_incomplete_gamma_function (double s, double t) { + if (t < 0.0) { + return 0.0; + } + double Sc = (1.0 / s); + Sc *= pow(t, s); + Sc *= exp(-t); + + double sum = 1.0; + double numerator = 1.0; + double denominator = 1.0; + double stop = 1e-30; + + bool done = false; + //int counter = 0; + while (!done) { + //counter++; + numerator *= t; + s++; + denominator *= s; + double curr = (numerator / denominator); + sum += curr; + if (curr < stop) { // get a better stop criterion + done = true; + } + } + //std::cerr << "LIGF run for " << counter++ << " iterations" << std::endl; + return sum * Sc; +} diff --git a/src/comp_test.h b/src/comp_test.h new file mode 100644 index 0000000..3da1e5a --- /dev/null +++ b/src/comp_test.h @@ -0,0 +1,55 @@ +#ifndef PX_COMP_TEST_H +#define PX_COMP_TEST_H + +#include +#include +#include + +#include "sequence.h" + +class CompTest { +private: + unsigned int num_taxa_; + unsigned int seq_length_; + unsigned int total_; // all valid chars + unsigned int df_; + double test_stat_; + double prob_; + + std::string seq_chars_; // the alphabet (DNA or AA only at present)z + std::string alpha_name_; // phyx alphabet name: DNA, AA, BINARY, MULTI + + bool alpha_set_; + bool datatype_set_; + bool is_multi_; + + char gap_; + char missing_; + + std::istream* pios_; + std::ostream* poos_; + + std::vector seqs_; + std::vector taxon_labels_; + std::vector< std::vector > indiv_char_counts_; + std::vector row_totals_; + std::vector col_totals_; + + unsigned int longest_tax_label_; + + void read_in_alignment (); + void set_datatype (); + void count_chars (); + void return_freq_table (); + void get_longest_taxon_label (); + double get_cell_value (const double& observed, const double& expected) const; + void calc_chi_square (); + double calc_chi_square_prob (const double& df, const double& xstat); + double lower_incomplete_gamma_function (double s, double t); + +public: + CompTest (std::istream* pios, std::ostream* poos); + void print_results (); +}; + +#endif /* PX_COMP_TEST_H */ diff --git a/src/concat.cpp b/src/concat.cpp new file mode 100644 index 0000000..6f99d48 --- /dev/null +++ b/src/concat.cpp @@ -0,0 +1,149 @@ +#include +#include +#include +#include + +#include "utils.h" +#include "sequence.h" +#include "seq_reader.h" +#include "seq_utils.h" +#include "concat.h" + + +// parent constructor. where things get concatenated +SequenceConcatenater::SequenceConcatenater (const bool& toupcase):num_partitions_(0), + num_char_(0), num_taxa_(0), toupcase_(toupcase) { +} + + +// constructor for individual file +SequenceConcatenater::SequenceConcatenater (std::string& seqf, const bool& toupcase):num_partitions_(0), + num_char_(0), num_taxa_(0), toupcase_(toupcase), filename_(seqf) { + read_sequences(); +} + + +void SequenceConcatenater::read_sequences () { + std::istream * pios = new std::ifstream(filename_); + + std::string alphaName; + seqs_ = ingest_alignment(pios, alphaName); + num_taxa_ = static_cast(seqs_.size()); + + if (toupcase_) { + for (unsigned int i = 0; i < num_taxa_; i++) { + seqs_[i].set_sequence(string_to_upper(seqs_[i].get_sequence())); + } + } + + if (!is_aligned(seqs_)) { + std::cerr << "Error: sequences in file '" << filename_ << "' are not aligned. Exiting." + << std::endl; + delete pios; + exit(1); + } + num_char_ = seqs_[0].get_length(); + num_partitions_ = 1; + partition_sizes_.push_back(num_char_); + delete pios; +} + + +// where stuff actually happens +void SequenceConcatenater::concatenate(SequenceConcatenater& newSeqs) { + std::string old_filler(num_char_, '-'); + unsigned int new_seq_len = newSeqs.get_sequence_length(); + std::string new_filler(static_cast(new_seq_len), '-'); + num_char_ += new_seq_len; + for (unsigned int i = 0; i != num_taxa_; i++) { + bool match_found = false; + if (newSeqs.num_taxa_ > 0) { + for (unsigned int j = 0; j != newSeqs.num_taxa_; j++) { + if (seqs_[i].get_id() == newSeqs.seqs_[j].get_id()) { + seqs_[i].set_sequence(seqs_[i].get_sequence() + newSeqs.seqs_[j].get_sequence()); + match_found = true; + // erase matched entry so it won't have to be compared against again. + // erase in reverse order. + delete_sequence(newSeqs, j); + break; + } + } + } + if (!match_found) { // taxon is missing from present locus. + seqs_[i].set_sequence(seqs_[i].get_sequence() + new_filler); + } + } + + // now, all that should be left are the novel sequences from the new file + if (newSeqs.num_taxa_ > 0) { + for (unsigned int i = 0; i != newSeqs.num_taxa_; i++) { + newSeqs.seqs_[i].set_sequence(old_filler + newSeqs.seqs_[i].get_sequence()); + seqs_.push_back(newSeqs.seqs_[i]); + num_taxa_++; + } + } + num_partitions_++; + partition_sizes_.push_back(newSeqs.get_sequence_length()); +} + + +unsigned int SequenceConcatenater::get_sequence_length () const { + return num_char_; +} + + +unsigned int SequenceConcatenater::get_num_taxa () const { + return num_taxa_; +} + + +void SequenceConcatenater::delete_sequence (SequenceConcatenater& newSeqs, + const unsigned int& index) { + newSeqs.seqs_.erase(newSeqs.seqs_.begin() + index); + newSeqs.num_taxa_--; +} + + +Sequence SequenceConcatenater::get_sequence (const unsigned int& index) const { + return seqs_[index]; +} + + +// not currently used +/* +std::vector SequenceConcatenater::get_partition_sizes () const { + return partition_sizes_; +} +*/ + +void SequenceConcatenater::write_partition_information (const std::vector& inputFiles, + std::string& partfile) { + std::ofstream outfile(partfile.c_str()); + unsigned int charIndex = 1; + + // need to check seq type when writing this + // use infer_alpha / get_alpha_name + // but: are mixed seq types allowed? prolly... + // - so: need to check each one + + for (unsigned int i = 0; i < partition_sizes_.size(); i++) { + unsigned int stopIndex = charIndex + partition_sizes_[i] - 1; + bool going = true; + std::string alpha; + unsigned long j = 0; + while (going) { + Sequence terp = seqs_[j]; + std::string subseq = terp.get_sequence().substr((charIndex - 1), partition_sizes_[i]); + // check if all are the same character (presumably all N, but useful either way) + if (subseq.find_first_not_of(subseq.front()) != std::string::npos) { + terp.set_sequence(subseq); + alpha = terp.get_alpha_name(); + going = false; + } + j++; + } + outfile << alpha << ", " << inputFiles[i] << " = " << charIndex << "-" << stopIndex << std::endl; + charIndex = stopIndex + 1; + } + outfile.close(); +} diff --git a/src/concat.h b/src/concat.h new file mode 100644 index 0000000..6a7da05 --- /dev/null +++ b/src/concat.h @@ -0,0 +1,35 @@ +#ifndef PX_CONCAT_H +#define PX_CONCAT_H + +#include +#include + +class SequenceConcatenater { +private: + std::vector seqs_; + unsigned int num_partitions_; + unsigned int num_char_; + unsigned int num_taxa_; + bool toupcase_; + std::string filename_; + std::vector partition_sizes_; + + void read_sequences (); + unsigned int get_sequence_length () const; + + //std::vector get_partition_sizes ()const; // not currently used + void delete_sequence (SequenceConcatenater& newSeqs, const unsigned int& index); + +public: + explicit SequenceConcatenater (const bool& toupcase); + SequenceConcatenater (std::string& seqf, const bool& toupcase); + void concatenate (SequenceConcatenater& newSeqs); + + unsigned int get_num_taxa () const; + Sequence get_sequence (const unsigned int& index) const; + void write_partition_information (const std::vector& inputFiles, + std::string& partfile); + //~SequenceConcatenater (); +}; + +#endif /* PX_CONCAT_H */ diff --git a/src/config.h.in b/src/config.h.in new file mode 100644 index 0000000..f456dc5 --- /dev/null +++ b/src/config.h.in @@ -0,0 +1,86 @@ +/* config.h.in. Generated from configure.ac by autoheader. */ + +/* Define to 1 if you have the header file. */ +#undef HAVE_FENV_H + +/* Define to 1 if you have the `floor' function. */ +#undef HAVE_FLOOR + +/* Define to 1 if you have the header file. */ +#undef HAVE_INTTYPES_H + +/* Define to 1 if you have the `m' library (-lm). */ +#undef HAVE_LIBM + +/* Define to 1 if your system has a GNU libc compatible `malloc' function, and + to 0 otherwise. */ +#undef HAVE_MALLOC + +/* Define to 1 if you have the header file. */ +#undef HAVE_MEMORY_H + +/* Define to 1 if you have the `pow' function. */ +#undef HAVE_POW + +/* Define to 1 if you have the `sqrt' function. */ +#undef HAVE_SQRT + +/* Define to 1 if stdbool.h conforms to C99. */ +#undef HAVE_STDBOOL_H + +/* Define to 1 if you have the header file. */ +#undef HAVE_STDINT_H + +/* Define to 1 if you have the header file. */ +#undef HAVE_STDLIB_H + +/* Define to 1 if you have the header file. */ +#undef HAVE_STRINGS_H + +/* Define to 1 if you have the header file. */ +#undef HAVE_STRING_H + +/* Define to 1 if you have the header file. */ +#undef HAVE_SYS_STAT_H + +/* Define to 1 if you have the header file. */ +#undef HAVE_SYS_TYPES_H + +/* Define to 1 if you have the header file. */ +#undef HAVE_UNISTD_H + +/* Define to 1 if the system has the type `_Bool'. */ +#undef HAVE__BOOL + +/* Define to the address where bug reports for this package should be sent. */ +#undef PACKAGE_BUGREPORT + +/* Define to the full name of this package. */ +#undef PACKAGE_NAME + +/* Define to the full name and version of this package. */ +#undef PACKAGE_STRING + +/* Define to the one symbol short name of this package. */ +#undef PACKAGE_TARNAME + +/* Define to the home page for this package. */ +#undef PACKAGE_URL + +/* Define to the version of this package. */ +#undef PACKAGE_VERSION + +/* Define to 1 if you have the ANSI C header files. */ +#undef STDC_HEADERS + +/* Define to `__inline__' or `__inline' if that's what the C compiler + calls it, or to nothing if 'inline' is not supported under any name. */ +#ifndef __cplusplus +#undef inline +#endif + +/* Define to rpl_malloc if the replacement function should be used. */ +#undef malloc + +/* Define to `unsigned int' if does not define. */ +#undef size_t diff --git a/src/configure.ac b/src/configure.ac new file mode 100644 index 0000000..7276091 --- /dev/null +++ b/src/configure.ac @@ -0,0 +1,102 @@ +# -*- Autoconf -*- +# Process this file with autoconf to produce a configure script. + +AC_PREREQ([2.69]) +AC_INIT([phyx],[1.0],[eebsmith@umich.edu]) + +AC_CONFIG_HEADERS([config.h]) + +# Checks for programs. +AC_PROG_CXX + +#taking out fortran +#AC_PROG_FC + +AC_CHECK_LIB([m], [fabs]) + +AC_PREFIX_DEFAULT(/usr/local) + +have_nlopt=no +AC_SUBST([HNLOPT],[Y]) +AC_CHECK_LIB(nlopt,nlopt_version,[have_nlopt=yes],[have_nlopt=no]) +AC_CHECK_HEADER(nlopt.h,[have_nlopt=yes],[have_nlopt=no]) +if test "x${have_nlopt}" = xno; then + AC_MSG_WARN([ +-------------------------------------------------------- +The nlopt library is required for optimization for some +programs. You can install from standard repos or you +can compile with these flags + ./configure --without-octave --without-matlab +--------------------------------------------------------]) + AC_SUBST([HNLOPT],[N]) +fi + +#AC_CHECK_HEADER([nlopt.hpp],[echo "found nlopt.hpp"],[echo "no nlopt.hpp found?!?"]) + +#need to find a better lib to search for +have_arma=no +AC_SUBST([HARM],[Y]) +AC_SEARCH_LIBS([wrapper_sgesv_], [armadillo], [have_arma=yes]) + +if test "x${have_arma}" = xno; then + AC_MSG_WARN([ +-------------------------------------------------------- +The armadillo library is required for some linear algebra +operations. +phyx was developed with armadillo compiled with these flags + ./configure +--------------------------------------------------------]) + AC_SUBST([HARM],[N]) +fi + +# Checks for header files. +AC_CHECK_HEADERS([fenv.h stdlib.h string.h]) + +# Checks for typedefs, structures, and compiler characteristics. +AC_HEADER_STDBOOL +AC_C_INLINE +AC_TYPE_SIZE_T + +# Checks for library functions. +AC_FUNC_MALLOC +AC_FUNC_STRTOD +AC_CHECK_FUNCS([floor pow sqrt]) + +############################# +# Platform specific setup +############################# + +OPT_FLAGS="-O3 -std=c++14" + +AC_SUBST([HOMP],[N]) +if `$CXX -v 2>&1 | grep 'gcc version' >/dev/null 2>&1` ; then + OPT_FLAGS+=" -fopenmp" + AC_SUBST([HOMP],[Y]) +fi + +#AC_CANONICAL_HOST +## Check for which host we are on and setup a few things +## specifically based on the host +#case $host_os in +# darwin* ) +# # Do something specific for mac +# ;; +# linux*) +# # Do something specific for linux +# OPT_FLAGS="$OPT_FLAGS -march=native" +# ;; +# *BSD*) +# # Do something specific for BSD +# ;; +# *) +# #Default Case +# AC_MSG_ERROR([Your platform is not currently supported]) +# ;; +#esac + +AC_SUBST(OPT_FLAGS) + +############################# + +AC_CONFIG_FILES([Makefile]) +AC_OUTPUT diff --git a/src/constants.h b/src/constants.h new file mode 100644 index 0000000..46d2474 --- /dev/null +++ b/src/constants.h @@ -0,0 +1,12 @@ +#ifndef PX_CONSTANTS_H +#define PX_CONSTANTS_H + +//#include + +// a place to put global constants so they do not have to be redefined + +const long double PI = 3.1415926535897932384626433832795L; +const long double E = 2.718281828459045; +const double EPSILON = 1e-7; + +#endif /* PX_CONSTANTS_H */ diff --git a/src/cont_models.cpp b/src/cont_models.cpp new file mode 100644 index 0000000..3ebab5c --- /dev/null +++ b/src/cont_models.cpp @@ -0,0 +1,250 @@ +#include +#include +#include +#include + +using namespace arma; + +#include "tree_utils.h" +#include "tree.h" +#include "cont_models.h" +#include "constants.h" // for PI and E + + +extern const long double PI; +extern const long double E; + + +void calc_vcv (Tree * tree, mat& vcv) { + int numlvs = tree->getExternalNodeCount(); + vcv = mat(numlvs, numlvs); + int count = 0; + for (int i = 0; i < numlvs; i++) { + int count2 = 0; + for (int j = 0; j < numlvs; j++) { + if (i != j) { + Node * a = getMRCA_forVCV(tree->getExternalNode(i), tree->getExternalNode(j)); + double length = get_length_to_root(a); + vcv(count, count2) = length; + } else { + double length = get_length_to_root(tree->getExternalNode(i)); + vcv(count, count2) = length; + } + count2 += 1; + } + count += 1; + } +} + + +/* + * get the MRCA + * this calculates the typical algorithm for MRCA + * can be a little slow, so probably best to use + * getMRCAFromPath_forVCV + */ +Node * getMRCA_forVCV (Node * curn1, Node * curn2) { + Node * mrca = nullptr; + //get path to root for first node + std::vector path1; + Node * parent = curn1; + path1.push_back(parent); + while (parent != nullptr) { + path1.push_back(parent); + if (parent->getParent() != nullptr) { + parent = parent->getParent(); + } else { + break; + } + } + //find first match between this node and the first one + parent = curn2; + bool x = true; + while (x) { + int psize = path1.size(); + for (int i = 0; i < psize; i++) { + if (parent == path1.at(i)) { + mrca = parent; + x = false; + break; + } + } + parent = parent->getParent(); + } + return mrca; +} + + +/* + * this saves a great deal of time as it takes the already + * obtained path and finds the match with the second node + */ +Node * getMRCAFromPath_forVCV (std::vector * path1, Node * curn2) { + Node * mrca = nullptr; + Node * parent = curn2; + bool x = true; + while (x) { + int psize = path1->size(); + for (int i = 0; i < psize; i++) { + if (parent == path1->at(i)) { + mrca = parent; + x = false; + break; + } + } + parent = parent->getParent(); + } + return mrca; +} + + +/* + calculate the maximum likelihood for the ancestral state and the rate + calc_bm_like only calculates the rate and solves for the anc state +#http://en.wikipedia.org/wiki/Multivariate_normal_distribution#Non-degenerate_case +x should be a vector +mu should be a vector +sigma should be vcv with sigma already applied + */ +double norm_pdf_multivariate (rowvec& x, rowvec& mu, mat& sigma) { + unsigned int size = x.n_cols; + if (size == mu.n_cols && sigma.n_rows == size && sigma.n_cols == size) { + double DET = det(sigma); + if (DET == 0) { + std::cerr << "The covariance matrix can't be singular" << std::endl; + exit(0); + } + double norm_const = 1.0/ ( pow((2*PI), double(size)/2) * pow(DET, 1.0/2) ); + mat x_mu = (mat) x - mu; + mat tm = (x_mu * inv(sigma) * trans(x_mu)); + double big1 = tm(0, 0); + double result = pow(E, -0.5 * big1); + double final = norm_const * result; + return final; + } else { + std::cerr << "The dimensions of the input don't match" << std::endl; + exit(0); + } +} + + +double norm_log_pdf_multivariate (rowvec& x, rowvec& mu, mat& sigma) { + unsigned int size = x.n_cols; + if (size == mu.n_cols && sigma.n_rows == size && sigma.n_cols == size) { + double DET; + double sign; + log_det(DET, sign, sigma); + if (DET == 0) { + std::cerr << "The covariance matrix can't be singular" << std::endl; + exit(0); + } + mat U; vec s; mat V; + svd(U, s, V, sigma,"dc"); + mat diagD (s.size(), s.size()); + diagD.zeros(); + diagD.diag() = 1./s; + mat invC2 = V*diagD*trans(U); + rowvec ancA = x - mu; + double final = -.5 * (dot(invC2*trans(ancA), ancA))-0.5 * DET -0.5 * (size * log(2*PI)); + return final; + } else { + std::cerr << "The dimensions of the input don't match" << std::endl; + exit(0); + } +} + + +/** + * assumes that the characters are in get_cont_char and that the + * results will be in assocDoubleVector as val and valse + */ +void calc_square_change_anc_states (Tree * tree, int index) { + int df = 0; + int count = 0; + std::map nodenum; + for (unsigned int i = 0; i < tree->getInternalNodeCount(); i++) { + nodenum[tree->getInternalNode(i)] = count; + count += 1; + df += 1; + (*tree->getInternalNode(i)->getDoubleVector("val"))[index] = 0.0; + } + df -= 1; + mat fullMcp(df+1, df+1); + vec fullVcp(df+1); + fullMcp.fill(0.0); + fullVcp.fill(0.0); + calc_postorder_square_change(tree->getRoot(), nodenum, &fullMcp, &fullVcp, index); + mat b = chol(fullMcp); + vec mle; + mat x = solve(trimatl(b.t())*b, fullVcp); + count = 0; + for (unsigned int i = 0; i < tree->getInternalNodeCount(); i++) { + (*tree->getInternalNode(i)->getDoubleVector("val"))[index] = x(nodenum[tree->getInternalNode(i)], 0); + count += 1; + } +} + + +void calc_postorder_square_change (Node * node, std::map& nodenum, + mat * fullMcp, mat * fullVcp, int index) { + for (unsigned int i = 0; i < node->getChildCount(); i++) { + calc_postorder_square_change(node->getChild(i), nodenum, fullMcp, fullVcp, index); + } + if (node->getChildCount() > 0) { + int nni = nodenum[node]; + for (unsigned int j = 0; j < node->getChildCount(); j++) { + double tbl = 2./node->getChild(j)->getBL(); + (*fullMcp)(nni, nni) += tbl; + if (node->getChild(j)->getChildCount() == 0) { + (*fullVcp)[nni] += (*node->getChild(j)->getDoubleVector("val"))[index] * tbl; + } else { + int nnj = nodenum[node->getChild(j)]; + (*fullMcp)(nni, nnj) -= tbl; + (*fullMcp)(nnj, nni) -= tbl; + (*fullMcp)(nnj, nnj) += tbl; + } + } + } +} + + +double calc_bm_node_postorder (Node * node, int nch, double sigma) { + double node_like = 0.; + for (unsigned int i = 0; i < node->getChildCount(); i++) { + if (node->getChild(i)->isInternal()) { + node_like += calc_bm_node_postorder(node->getChild(i), nch, sigma); + } + } + if (node->isInternal()) { + double ch1 = (*node->getChild(0)->getDoubleVector("val"))[nch]; + double ch2 = (*node->getChild(1)->getDoubleVector("val"))[nch]; + double ch = ch1 - ch2; + double bl1 = node->getChild(0)->getBL(); + double bl2 = node->getChild(1)->getBL(); + double bl = bl1 + bl2; + double cur_like = ((-0.5)* ((log(2*M_PI*sigma))+(log(bl))+(pow(ch, 2)/(sigma*bl)))); + node_like += cur_like; + if (!node->isRoot()) { + (*node->getDoubleVector("val"))[nch] = ((bl2*ch1)+(bl1*ch2))/(bl); + node->setBL(node->getBL()+((bl1*bl2)/(bl1+bl2))); + } + } + return node_like; +} + + +double calc_bm_prune (Tree * tr, double sigma) { + int num_char = (*tr->getRoot()->getDoubleVector("val")).size(); + double tlike = 0; + std::map oldlen; + for (unsigned int i = 0; i < tr->getNodeCount(); i++) { + oldlen[tr->getNode(i)] = tr->getNode(i)->getBL(); + } + for (int i = 0; i < num_char; i++) { + for (unsigned int j = 0; j < tr->getNodeCount(); j++) { + tr->getNode(j)->setBL(oldlen[tr->getNode(j)]); + } + tlike += calc_bm_node_postorder(tr->getRoot(), i, sigma); + } + return tlike; +} diff --git a/src/cont_models.h b/src/cont_models.h new file mode 100644 index 0000000..4451c13 --- /dev/null +++ b/src/cont_models.h @@ -0,0 +1,27 @@ +#ifndef PX_CONT_MODELS_H +#define PX_CONT_MODELS_H + +#include +#include +#include + +#include "tree.h" + +class Node; // forward declaration + +#include + +using namespace arma; + +double norm_pdf_multivariate (rowvec& x, rowvec& mu, mat& sigma); +double norm_log_pdf_multivariate (rowvec& x, rowvec& mu, mat& sigma); +Node * getMRCA_forVCV (Node * curn1,Node * curn2); +Node * getMRCAFromPath_forVCV (std::vector * path1,Node * curn2); +void calc_vcv(Tree * tr, mat& vcv); +void calc_square_change_anc_states (Tree * tree, int index); +void calc_postorder_square_change (Node * node, std::map& nodenum, + mat * fullMcp, mat * fullVcp, int index); +double calc_bm_node_postorder (Node * node, int nch, double sigma); +double calc_bm_prune (Tree * tr, double sigma); + +#endif /* PX_CONT_MODELS_H */ diff --git a/src/edlib.cpp b/src/edlib.cpp new file mode 100755 index 0000000..a3fc261 --- /dev/null +++ b/src/edlib.cpp @@ -0,0 +1,1497 @@ +#include +#include +#include +#include +#include +#include + +#include "edlib.h" + + +//typedef uint64_t Word; +using Word = uint64_t; +static const int WORD_SIZE = sizeof(Word) * 8; // Size of Word in bits +static const Word WORD_1 = static_cast(1); +static const Word HIGH_BIT_MASK = WORD_1 << (WORD_SIZE - 1); // 100..00 + + +// Data needed to find alignment. +struct AlignmentData { + Word* Ps; + Word* Ms; + int* scores; + int* firstBlocks; + int* lastBlocks; + + AlignmentData(int maxNumBlocks, int targetLength) { + // We build a complete table and mark first and last block for each column + // (because algorithm is banded so only part of each columns is used). + // TODO: do not build a whole table, but just enough blocks for each column. + Ps = new Word[static_cast(maxNumBlocks * targetLength)]; + Ms = new Word[static_cast(maxNumBlocks * targetLength)]; + scores = new int[static_cast(maxNumBlocks * targetLength)]; + firstBlocks = new int[static_cast(targetLength)]; + lastBlocks = new int[static_cast(targetLength)]; + } + + ~AlignmentData () { + delete[] Ps; + delete[] Ms; + delete[] scores; + delete[] firstBlocks; + delete[] lastBlocks; + } +}; + + +struct Block { + Word P; // Pvin + Word M; // Mvin + int score; // score of last cell in block; + + Block () = default; + Block (Word P_, Word M_, int score_):P(P_), M(M_), score(score_) {} +}; + + +static int myersCalcEditDistanceSemiGlobal (const Word* Peq, int W, int maxNumBlocks, + const unsigned char* query, int queryLength, + const unsigned char* target, int targetLength, + int alphabetLength, int k, EdlibAlignMode mode, + int* bestScore_, int** positions_, int* numPositions_); + + +static int myersCalcEditDistanceNW (const Word* Peq, int W, int maxNumBlocks, + const unsigned char* query, int queryLength, + const unsigned char* target, int targetLength, + int alphabetLength, int k, int* bestScore_, + int* position_, bool findAlignment, + AlignmentData** alignData, int targetStopPosition); + + +static int obtainAlignment ( + const unsigned char* query, const unsigned char* rQuery, int queryLength, + const unsigned char* target, const unsigned char* rTarget, int targetLength, + int alphabetLength, int bestScore, + unsigned char** alignment, int* alignmentLength); + + +static int obtainAlignmentHirschberg ( + const unsigned char* query, const unsigned char* rQuery, int queryLength, + const unsigned char* target, const unsigned char* rTarget, int targetLength, + int alphabetLength, int bestScore, + unsigned char** alignment, int* alignmentLength); + + +static int obtainAlignmentTraceback (int queryLength, int targetLength, + int bestScore, const AlignmentData* alignData, + unsigned char** alignment, int* alignmentLength); + + +static int transformSequences (const char* queryOriginal, int queryLength, + const char* targetOriginal, int targetLength, + unsigned char** queryTransformed, + unsigned char** targetTransformed); + +static inline int ceilDiv (int x, int y); + + +static inline unsigned char* createReverseCopy (const unsigned char* seq, int length); + + +static inline Word* buildPeq (int alphabetLength, const unsigned char* query, + int queryLength); + + + +/** + * Main edlib method. + */ +EdlibAlignResult edlibAlign (const char* const queryOriginal, const int queryLength, + const char* const targetOriginal, const int targetLength, + const EdlibAlignConfig config) { + EdlibAlignResult result; + result.editDistance = -1; + result.endLocations = result.startLocations = nullptr; + result.numLocations = 0; + result.alignment = nullptr; + result.alignmentLength = 0; + //result.alphabetLength = 0; + + + /*------------ TRANSFORM SEQUENCES AND RECOGNIZE ALPHABET -----------*/ + unsigned char* query, * target; + int alphabetLength = transformSequences(queryOriginal, queryLength, targetOriginal, targetLength, + &query, &target); + result.alphabetLength = alphabetLength; + /*-------------------------------------------------------*/ + + + /*--------------------- INITIALIZATION ------------------*/ + int maxNumBlocks = ceilDiv(queryLength, WORD_SIZE); // bmax in Myers + int W = maxNumBlocks * WORD_SIZE - queryLength; // number of redundant cells in last level blocks + + Word* Peq = buildPeq(alphabetLength, query, queryLength); + /*-------------------------------------------------------*/ + + + /*------------------ MAIN CALCULATION -------------------*/ + // TODO: Store alignment data only after k is determined? That could make things faster. + int positionNW; // Used only when mode is NW. + AlignmentData* alignData = nullptr; + bool dynamicK = false; + int k = config.k; + if (k < 0) { // If valid k is not given, auto-adjust k until solution is found. + dynamicK = true; + k = WORD_SIZE; // Gives better results than smaller k. + } + + do { + if (config.mode == EDLIB_MODE_HW || config.mode == EDLIB_MODE_SHW) { + myersCalcEditDistanceSemiGlobal(Peq, W, maxNumBlocks, + query, queryLength, target, targetLength, + alphabetLength, k, config.mode, &(result.editDistance), + &(result.endLocations), &(result.numLocations)); + } else { // mode == EDLIB_MODE_NW + myersCalcEditDistanceNW(Peq, W, maxNumBlocks, + query, queryLength, target, targetLength, + alphabetLength, k, &(result.editDistance), &positionNW, + false, &alignData, -1); + } + k *= 2; + } while(dynamicK && result.editDistance == -1); + + if (result.editDistance >= 0) { // If there is solution. + // If NW mode, set end location explicitly. + if (config.mode == EDLIB_MODE_NW) { + result.endLocations = static_cast(malloc(sizeof(int) * 1)); + result.endLocations[0] = targetLength - 1; + result.numLocations = 1; + } + + // Find starting locations. + if (config.task == EDLIB_TASK_LOC || config.task == EDLIB_TASK_PATH) { + result.startLocations = static_cast(malloc(static_cast(result.numLocations) * sizeof(int))); + if (config.mode == EDLIB_MODE_HW) { // If HW, I need to calculate start locations. + const unsigned char* rTarget = createReverseCopy(target, targetLength); + const unsigned char* rQuery = createReverseCopy(query, queryLength); + Word* rPeq = buildPeq(alphabetLength, rQuery, queryLength); // Peq for reversed query + for (int i = 0; i < result.numLocations; i++) { + int endLocation = result.endLocations[i]; + int bestScoreSHW, numPositionsSHW; + int* positionsSHW; + myersCalcEditDistanceSemiGlobal( + rPeq, W, maxNumBlocks, + rQuery, queryLength, rTarget + targetLength - endLocation - 1, endLocation + 1, + alphabetLength, result.editDistance, EDLIB_MODE_SHW, + &bestScoreSHW, &positionsSHW, &numPositionsSHW); + // Taking last location as start ensures that alignment will not start with insertions + // if it can start with mismatches instead. + result.startLocations[i] = endLocation - positionsSHW[numPositionsSHW - 1]; + free(positionsSHW); + } + delete[] rTarget; + delete[] rQuery; + delete[] rPeq; + } else { // If mode is SHW or NW + for (int i = 0; i < result.numLocations; i++) { + result.startLocations[i] = 0; + } + } + } + + // Find alignment -> all comes down to finding alignment for NW. + // Currently we return alignment only for first pair of locations. + if (config.task == EDLIB_TASK_PATH) { + int alnStartLocation = result.startLocations[0]; + int alnEndLocation = result.endLocations[0]; + const unsigned char* alnTarget = target + alnStartLocation; + const int alnTargetLength = alnEndLocation - alnStartLocation + 1; + const unsigned char* rAlnTarget = createReverseCopy(alnTarget, alnTargetLength); + const unsigned char* rQuery = createReverseCopy(query, queryLength); + obtainAlignment(query, rQuery, queryLength, + alnTarget, rAlnTarget, alnTargetLength, + alphabetLength, result.editDistance, + &(result.alignment), &(result.alignmentLength)); + delete[] rAlnTarget; + delete[] rQuery; + } + } + /*-------------------------------------------------------*/ + + //--- Free memory ---// + delete[] Peq; + free(query); + free(target); + if (alignData != nullptr) { + delete alignData; + } + //-------------------// + + return result; +} + + +char* edlibAlignmentToCigar (const unsigned char* const alignment, const int alignmentLength, + const EdlibCigarFormat cigarFormat) { + if (cigarFormat != EDLIB_CIGAR_EXTENDED && cigarFormat != EDLIB_CIGAR_STANDARD) { + return nullptr; + } + + // Maps move code from alignment to char in cigar. + // 0 1 2 3 + char moveCodeToChar[] = {'=', 'I', 'D', 'X'}; + if (cigarFormat == EDLIB_CIGAR_STANDARD) { + moveCodeToChar[0] = moveCodeToChar[3] = 'M'; + } + + auto* cigar = new std::vector(); + char lastMove = 0; // Char of last move. 0 if there was no previous move. + int numOfSameMoves = 0; + for (int i = 0; i <= alignmentLength; i++) { + // if new sequence of same moves started + if (i == alignmentLength || (moveCodeToChar[alignment[i]] != lastMove && lastMove != 0)) { + // Write number of moves to cigar string. + int numDigits = 0; + for (; numOfSameMoves != 0; numOfSameMoves /= 10) { + cigar->push_back('0' + numOfSameMoves % 10); + numDigits++; + } + std::reverse(cigar->end() - numDigits, cigar->end()); + // Write code of move to cigar string. + cigar->push_back(lastMove); + // If not at the end, start new sequence of moves. + if (i < alignmentLength) { + // Check if alignment has valid values. + if (alignment[i] > 3) { + delete cigar; + return nullptr; + } + numOfSameMoves = 0; + } + } + if (i < alignmentLength) { + lastMove = moveCodeToChar[alignment[i]]; + numOfSameMoves++; + } + } + cigar->push_back(0); // Null character termination. + auto cigar_ = static_cast(malloc(cigar->size() * sizeof(char))); + memcpy(cigar_, &(*cigar)[0], cigar->size() * sizeof(char)); + delete cigar; + + return cigar_; +} + + +/** + * Build Peq table for given query and alphabet. + * Peq is table of dimensions alphabetLength+1 x maxNumBlocks. + * Bit i of Peq[s * maxNumBlocks + b] is 1 if i-th symbol from block b of query equals symbol s, otherwise it is 0. + * NOTICE: free returned array with delete[]! + */ +static inline Word* buildPeq (const int alphabetLength, const unsigned char* const query, + const int queryLength) { + int maxNumBlocks = ceilDiv(queryLength, WORD_SIZE); + // table of dimensions alphabetLength+1 x maxNumBlocks. Last symbol is wildcard. + auto* Peq = new Word[static_cast((alphabetLength + 1) * maxNumBlocks)]; + + // Build Peq (1 is match, 0 is mismatch). NOTE: last column is wildcard(symbol that matches anything) with just 1s + for (int symbol = 0; symbol <= alphabetLength; symbol++) { + for (int b = 0; b < maxNumBlocks; b++) { + if (symbol < alphabetLength) { + Peq[symbol * maxNumBlocks + b] = 0; + for (int r = (b+1) * WORD_SIZE - 1; r >= b * WORD_SIZE; r--) { + Peq[symbol * maxNumBlocks + b] <<= 1; + // NOTE: We pretend like query is padded at the end with W wildcard symbols + if (r >= queryLength || query[r] == symbol) { + Peq[symbol * maxNumBlocks + b] += 1; + } + } + } else { // Last symbol is wildcard, so it is all 1s + Peq[symbol * maxNumBlocks + b] = static_cast(-1); + } + } + } + + return Peq; +} + + +/** + * Returns new sequence that is reverse of given sequence. + * Free returned array with delete[]. + */ +static inline unsigned char* createReverseCopy (const unsigned char* const seq, + const int length) { + auto* rSeq = new unsigned char[static_cast(length)]; + for (int i = 0; i < length; i++) { + rSeq[i] = seq[length - i - 1]; + } + return rSeq; +} + + + +/** + * Corresponds to Advance_Block function from Myers. + * Calculates one word(block), which is part of a column. + * Highest bit of word (one most to the left) is most bottom cell of block from column. + * Pv[i] and Mv[i] define vin of cell[i]: vin = cell[i] - cell[i-1]. + * @param [in] Pv Bitset, Pv[i] == 1 if vin is +1, otherwise Pv[i] == 0. + * @param [in] Mv Bitset, Mv[i] == 1 if vin is -1, otherwise Mv[i] == 0. + * @param [in] Eq Bitset, Eq[i] == 1 if match, 0 if mismatch. + * @param [in] hin Will be +1, 0 or -1. + * @param [out] PvOut Bitset, PvOut[i] == 1 if vout is +1, otherwise PvOut[i] == 0. + * @param [out] MvOut Bitset, MvOut[i] == 1 if vout is -1, otherwise MvOut[i] == 0. + * @param [out] hout Will be +1, 0 or -1. + */ +static inline int calculateBlock (Word Pv, Word Mv, Word Eq, const int hin, + Word &PvOut, Word &MvOut) { + // hin can be 1, -1 or 0. + // 1 -> 00...01 + // 0 -> 00...00 + // -1 -> 11...11 (2-complement) + + Word hinIsNeg = static_cast(hin >> 2) & WORD_1; // 00...001 if hin is -1, 00...000 if 0 or 1 + + Word Xv = Eq | Mv; + // This is instruction below written using 'if': if (hin < 0) Eq |= (Word)1; + Eq |= hinIsNeg; + Word Xh = (((Eq & Pv) + Pv) ^ Pv) | Eq; + + Word Ph = Mv | ~(Xh | Pv); + Word Mh = Pv & Xh; + + int hout = 0; + // This is instruction below written using 'if': if (Ph & HIGH_BIT_MASK) hout = 1; + hout = (Ph & HIGH_BIT_MASK) >> (WORD_SIZE - 1); + // This is instruction below written using 'if': if (Mh & HIGH_BIT_MASK) hout = -1; + hout -= (Mh & HIGH_BIT_MASK) >> (WORD_SIZE - 1); + + Ph <<= 1; + Mh <<= 1; + + // This is instruction below written using 'if': if (hin < 0) Mh |= (Word)1; + Mh |= hinIsNeg; + // This is instruction below written using 'if': if (hin > 0) Ph |= (Word)1; + Ph |= static_cast((hin + 1) >> 1); + + PvOut = Mh | ~(Xv | Ph); + MvOut = Ph & Xv; + + return hout; +} + +/** + * Does ceiling division x / y. + * Note: x and y must be non-negative and x + y must not overflow. + */ +static inline int ceilDiv(const int x, const int y) { + return x % y ? x / y + 1 : x / y; +} + +static inline int min(const int x, const int y) { + return x < y ? x : y; +} + +static inline int max(const int x, const int y) { + return x > y ? x : y; +} + + +/** + * @param [in] block + * @return Values of cells in block, starting with bottom cell in block. + */ +static inline std::vector getBlockCellValues (const Block& block) { + std::vector scores(WORD_SIZE); + int score = block.score; + Word mask = HIGH_BIT_MASK; + for (int i = 0; i < WORD_SIZE - 1; i++) { + scores[static_cast(i)] = score; + if ((block.P & mask) != 0u) { + score--; + } + if ((block.M & mask) != 0u) { + score++; + } + mask >>= 1; + } + scores[WORD_SIZE - 1] = score; + return scores; +} + + +/** + * Writes values of cells in block into given array, starting with first/top cell. + * @param [in] block + * @param [out] dest Array into which cell values are written. Must have size of at least WORD_SIZE. + */ +static inline void readBlock (const Block& block, int* const dest) { + int score = block.score; + Word mask = HIGH_BIT_MASK; + for (int i = 0; i < WORD_SIZE - 1; i++) { + dest[WORD_SIZE - 1 - i] = score; + if ((block.P & mask) != 0u) { + score--; + } + if ((block.M & mask) != 0u) { + score++; + } + mask >>= 1; + } + dest[0] = score; +} + + +/** + * Writes values of cells in block into given array, starting with last/bottom cell. + * @param [in] block + * @param [out] dest Array into which cell values are written. Must have size of at least WORD_SIZE. + */ +static inline void readBlockReverse (const Block& block, int* const dest) { + int score = block.score; + Word mask = HIGH_BIT_MASK; + for (int i = 0; i < WORD_SIZE - 1; i++) { + dest[i] = score; + if ((block.P & mask) != 0u) { + score--; + } + if ((block.M & mask) != 0u) { + score++; + } + mask >>= 1; + } + dest[WORD_SIZE - 1] = score; +} + +/** + * @param [in] block + * @param [in] k + * @return True if all cells in block have value larger than k, otherwise false. + */ +static inline bool allBlockCellsLarger (const Block& block, const int k) { + std::vector scores = getBlockCellValues(block); + for (int i = 0; i < WORD_SIZE; i++) { + if (scores[static_cast(i)] <= k) { + return false; + } + } + return true; +} + + +/** + * Uses Myers' bit-vector algorithm to find edit distance for one of semi-global alignment methods. + * @param [in] Peq Query profile. + * @param [in] W Size of padding in last block. + * TODO: Calculate this directly from query, instead of passing it. + * @param [in] maxNumBlocks Number of blocks needed to cover the whole query. + * TODO: Calculate this directly from query, instead of passing it. + * @param [in] query + * @param [in] queryLength + * @param [in] target + * @param [in] targetLength + * @param [in] alphabetLength + * @param [in] k + * @param [in] mode EDLIB_MODE_HW or EDLIB_MODE_SHW + * @param [out] bestScore_ Edit distance. + * @param [out] positions_ Array of 0-indexed positions in target at which best score was found. + Make sure to free this array with free(). + * @param [out] numPositions_ Number of positions in the positions_ array. + * @return Status. + */ +static int myersCalcEditDistanceSemiGlobal ( + const Word* const Peq, const int W, const int maxNumBlocks, + const unsigned char* const query, const int queryLength, + const unsigned char* const target, const int targetLength, + const int alphabetLength, int k, const EdlibAlignMode mode, + int* const bestScore_, int** const positions_, int* const numPositions_) { + *positions_ = nullptr; + *numPositions_ = 0; + + // firstBlock is 0-based index of first block in Ukkonen band. + // lastBlock is 0-based index of last block in Ukkonen band. + int firstBlock = 0; + int lastBlock = min(ceilDiv(k + 1, WORD_SIZE), maxNumBlocks) - 1; // y in Myers + Block *bl; // Current block + + auto* blocks = new Block[static_cast(maxNumBlocks)]; + + // For HW, solution will never be larger then queryLength. + if (mode == EDLIB_MODE_HW) { + k = min(queryLength, k); + } + + // Each STRONG_REDUCE_NUM column is reduced in more expensive way. + // This gives speed up of about 2 times for small k. + const int STRONG_REDUCE_NUM = 2048; + + // Initialize P, M and score + bl = blocks; + for (int b = 0; b <= lastBlock; b++) { + bl->score = (b + 1) * WORD_SIZE; + bl->P = static_cast(-1); // All 1s + bl->M = static_cast(0); + bl++; + } + + int bestScore = -1; + std::vector positions; // TODO: Maybe put this on heap? + const int startHout = mode == EDLIB_MODE_HW ? 0 : 1; // If 0 then gap before query is not penalized; + const unsigned char* targetChar = target; + for (int c = 0; c < targetLength; c++) { // for each column + const Word* Peq_c = Peq + (*targetChar) * maxNumBlocks; + + //----------------------- Calculate column -------------------------// + int hout = startHout; + bl = blocks + firstBlock; + Peq_c += firstBlock; + for (int b = firstBlock; b <= lastBlock; b++) { + hout = calculateBlock(bl->P, bl->M, *Peq_c, hout, bl->P, bl->M); + bl->score += hout; + bl++; + Peq_c++; + } + bl--; + Peq_c--; + //------------------------------------------------------------------// + + //---------- Adjust number of blocks according to Ukkonen ----------// + if ((lastBlock < maxNumBlocks - 1) && (bl->score - hout <= k) // bl is pointing to last block + && (((*(Peq_c + 1) & WORD_1) != 0u) || hout < 0)) { // Peq_c is pointing to last block + // If score of left block is not too big, calculate one more block + lastBlock++; + bl++; + Peq_c++; + bl->P = static_cast(-1); // All 1s + bl->M = static_cast(0); + bl->score = (bl - 1)->score - hout + WORD_SIZE + calculateBlock(bl->P, bl->M, *Peq_c, hout, bl->P, bl->M); + } else { + while (lastBlock >= firstBlock && bl->score >= k + WORD_SIZE) { + lastBlock--; + bl--; + Peq_c--; + } + } + + // Every some columns, do some expensive but also more efficient block reducing -> this is important! + if (c % STRONG_REDUCE_NUM == 0) { + while (lastBlock >= firstBlock && allBlockCellsLarger(*bl, k)) { + lastBlock--; + bl--; + Peq_c--; + } + } + + if (mode != EDLIB_MODE_HW) { + while (firstBlock <= lastBlock && blocks[firstBlock].score >= k + WORD_SIZE) { + firstBlock++; + } + if (c % STRONG_REDUCE_NUM == 0) { // Do strong reduction every some blocks + while (firstBlock <= lastBlock && allBlockCellsLarger(blocks[firstBlock], k)) { + firstBlock++; + } + } + } + + // For HW, even if all cells are > k, there still may be solution in next + // column because starting conditions at upper boundary are 0. + // That means that first block is always candidate for solution, + // and we can never end calculation before last column. + if (mode == EDLIB_MODE_HW) { + lastBlock = max(0, lastBlock); + } + + // If band stops to exist finish + if (lastBlock < firstBlock) { + *bestScore_ = bestScore; + if (bestScore != -1) { + *positions_ = static_cast(malloc(sizeof(int) * positions.size())); + *numPositions_ = static_cast(positions.size()); + copy(positions.begin(), positions.end(), *positions_); + } + delete[] blocks; + return EDLIB_STATUS_OK; + } + //------------------------------------------------------------------// + + //------------------------- Update best score ----------------------// + if (lastBlock == maxNumBlocks - 1) { + int colScore = bl->score; + if (colScore <= k) { // Scores > k dont have correct values (so we cannot use them), but are certainly > k. + // NOTE: Score that I find in column c is actually score from column c-W + if (bestScore == -1 || colScore <= bestScore) { + if (colScore != bestScore) { + positions.clear(); + bestScore = colScore; + // Change k so we will look only for equal or better + // scores then the best found so far. + k = bestScore; + } + positions.push_back(c - W); + } + } + } + //------------------------------------------------------------------// + + targetChar++; + } + + + // Obtain results for last W columns from last column. + if (lastBlock == maxNumBlocks - 1) { + std::vector blockScores = getBlockCellValues(*bl); + for (int i = 0; i < W; i++) { + int colScore = blockScores[static_cast(i + 1)]; + if (colScore <= k && (bestScore == -1 || colScore <= bestScore)) { + if (colScore != bestScore) { + positions.clear(); + k = bestScore = colScore; + } + positions.push_back(targetLength - W + i); + } + } + } + + *bestScore_ = bestScore; + if (bestScore != -1) { + *positions_ = static_cast(malloc(sizeof(int) * positions.size())); + *numPositions_ = static_cast(positions.size()); + copy(positions.begin(), positions.end(), *positions_); + } + + delete[] blocks; + return EDLIB_STATUS_OK; +} + + +/** + * Uses Myers' bit-vector algorithm to find edit distance for global(NW) alignment method. + * @param [in] Peq Query profile. + * @param [in] W Size of padding in last block. + * TODO: Calculate this directly from query, instead of passing it. + * @param [in] maxNumBlocks Number of blocks needed to cover the whole query. + * TODO: Calculate this directly from query, instead of passing it. + * @param [in] query + * @param [in] queryLength + * @param [in] target + * @param [in] targetLength + * @param [in] alphabetLength + * @param [in] k + * @param [out] bestScore_ Edit distance. + * @param [out] position_ 0-indexed position in target at which best score was found. + * @param [in] findAlignment If true, whole matrix is remembered and alignment data is returned. + * Quadratic amount of memory is consumed. + * @param [out] alignData Data needed for alignment traceback (for reconstruction of alignment). + * Set only if findAlignment is set to true, otherwise it is nullptr. + * Make sure to free this array using delete[]. + * @param [out] targetStopPosition If set to -1, whole calculation is performed normally, as expected. + * If set to p, calculation is performed up to position p in target (inclusive) + * and column p is returned as the only column in alignData. + * @return Status. + */ +static int myersCalcEditDistanceNW (const Word* const Peq, const int W, const int maxNumBlocks, + const unsigned char* const query, const int queryLength, + const unsigned char* const target, const int targetLength, + const int alphabetLength, int k, int* const bestScore_, + int* const position_, const bool findAlignment, + AlignmentData** const alignData, const int targetStopPosition) { + if (targetStopPosition > -1 && findAlignment) { + // They can not be both set at the same time! + return EDLIB_STATUS_ERROR; + } + + // Each STRONG_REDUCE_NUM column is reduced in more expensive way. + // TODO: Choose this number dynamically (based on query and target lengths?), + // so it does not affect speed of computation + const int STRONG_REDUCE_NUM = 2048; + + if (k < abs(targetLength - queryLength)) { + *bestScore_ = *position_ = -1; + return EDLIB_STATUS_OK; + } + + k = min(k, max(queryLength, targetLength)); // Upper bound for k + + // firstBlock is 0-based index of first block in Ukkonen band. + // lastBlock is 0-based index of last block in Ukkonen band. + int firstBlock = 0; + // This is optimal now, by my formula. + int lastBlock = min(maxNumBlocks, ceilDiv(min(k, (k + queryLength - targetLength) / 2) + 1, WORD_SIZE)) - 1; + Block* bl; // Current block + + auto* blocks = new Block[static_cast(maxNumBlocks)]; + + // Initialize P, M and score + bl = blocks; + for (int b = 0; b <= lastBlock; b++) { + bl->score = (b + 1) * WORD_SIZE; + bl->P = static_cast(-1); // All 1s + bl->M = static_cast(0); + bl++; + } + + // If we want to find alignment, we have to store needed data. + if (findAlignment) { + *alignData = new AlignmentData(maxNumBlocks, targetLength); + } else if (targetStopPosition > -1) { + *alignData = new AlignmentData(maxNumBlocks, 1); + } else { + *alignData = nullptr; + } + const unsigned char* targetChar = target; + for (int c = 0; c < targetLength; c++) { // for each column + const Word* Peq_c = Peq + *targetChar * maxNumBlocks; + + //----------------------- Calculate column -------------------------// + int hout = 1; + bl = blocks + firstBlock; + for (int b = firstBlock; b <= lastBlock; b++) { + hout = calculateBlock(bl->P, bl->M, Peq_c[b], hout, bl->P, bl->M); + bl->score += hout; + bl++; + } + bl--; + //------------------------------------------------------------------// + // bl now points to last block + + // Update k. I do it only on end of column because it would slow calculation too much otherwise. + // NOTICE: I add W when in last block because it is actually result from W cells to the left and W cells up. + k = min(k, bl->score + + max(targetLength - c - 1, queryLength - ((1 + lastBlock) * WORD_SIZE - 1) - 1) + + (lastBlock == maxNumBlocks - 1 ? W : 0)); + + //---------- Adjust number of blocks according to Ukkonen ----------// + //--- Adjust last block ---// + // If block is not beneath band, calculate next block. Only next because others are certainly beneath band. + if (lastBlock + 1 < maxNumBlocks + && !(//score[lastBlock] >= k + WORD_SIZE || // NOTICE: condition could be satisfied if above block also! + ((lastBlock + 1) * WORD_SIZE - 1 + > k - bl->score + 2 * WORD_SIZE - 2 - targetLength + c + queryLength))) { + lastBlock++; + bl++; + bl->P = static_cast(-1); // All 1s + bl->M = static_cast(0); + int newHout = calculateBlock(bl->P, bl->M, Peq_c[lastBlock], hout, bl->P, bl->M); + bl->score = (bl - 1)->score - hout + WORD_SIZE + newHout; + hout = newHout; + } + + // While block is out of band, move one block up. + // NOTE: Condition used here is more loose than the one from the article, + // since I simplified the max() part of it. + // I could consider adding that max part, for optimal performance. + while (lastBlock >= firstBlock + && (bl->score >= k + WORD_SIZE + || ((lastBlock + 1) * WORD_SIZE - 1 > + // TODO: Does not work if do not put +1! Why??? + k - bl->score + 2 * WORD_SIZE - 2 - targetLength + c + queryLength + 1))) { + lastBlock--; + bl--; + } + //-------------------------// + + //--- Adjust first block ---// + // While outside of band, advance block + while (firstBlock <= lastBlock + && (blocks[firstBlock].score >= k + WORD_SIZE + || ((firstBlock + 1) * WORD_SIZE - 1 < + blocks[firstBlock].score - k - targetLength + queryLength + c))) { + firstBlock++; + } + //--------------------------/ + + + // TODO: consider if this part is useful, it does not seem to help much + if (c % STRONG_REDUCE_NUM == 0) { // Every some columns do more expensive but more efficient reduction + while (lastBlock >= firstBlock) { + // If all cells outside of band, remove block + std::vector scores = getBlockCellValues(*bl); + int numCells = lastBlock == maxNumBlocks - 1 ? WORD_SIZE - W : WORD_SIZE; + int r = lastBlock * WORD_SIZE + numCells - 1; + bool reduce = true; + for (int i = WORD_SIZE - numCells; i < WORD_SIZE; i++) { + // TODO: Does not work if do not put +1! Why??? + if (scores[static_cast(i)] <= k && + r <= k - scores[static_cast(i)] - targetLength + c + queryLength + 1) { + reduce = false; + break; + } + r--; + } + if (!reduce) { + break; + } + lastBlock--; + bl--; + } + + while (firstBlock <= lastBlock) { + // If all cells outside of band, remove block + std::vector scores = getBlockCellValues(blocks[firstBlock]); + int numCells = firstBlock == maxNumBlocks - 1 ? WORD_SIZE - W : WORD_SIZE; + int r = firstBlock * WORD_SIZE + numCells - 1; + bool reduce = true; + for (int i = WORD_SIZE - numCells; i < WORD_SIZE; i++) { + if (scores[static_cast(i)] <= k && + r >= scores[static_cast(i)] - k - targetLength + c + queryLength) { + reduce = false; + break; + } + r--; + } + if (!reduce) { + break; + } + firstBlock++; + } + } + + + // If band stops to exist finish + if (lastBlock < firstBlock) { + *bestScore_ = *position_ = -1; + delete[] blocks; + return EDLIB_STATUS_OK; + } + //------------------------------------------------------------------// + + + //---- Save column so it can be used for reconstruction ----// + if (findAlignment && c < targetLength) { + bl = blocks + firstBlock; + for (int b = firstBlock; b <= lastBlock; b++) { + (*alignData)->Ps[maxNumBlocks * c + b] = bl->P; + (*alignData)->Ms[maxNumBlocks * c + b] = bl->M; + (*alignData)->scores[maxNumBlocks * c + b] = bl->score; + (*alignData)->firstBlocks[c] = firstBlock; + (*alignData)->lastBlocks[c] = lastBlock; + bl++; + } + } + //----------------------------------------------------------// + //---- If this is stop column, save it and finish ----// + if (c == targetStopPosition) { + for (int b = firstBlock; b <= lastBlock; b++) { + (*alignData)->Ps[b] = (blocks + b)->P; + (*alignData)->Ms[b] = (blocks + b)->M; + (*alignData)->scores[b] = (blocks + b)->score; + (*alignData)->firstBlocks[0] = firstBlock; + (*alignData)->lastBlocks[0] = lastBlock; + } + *bestScore_ = -1; + *position_ = targetStopPosition; + delete[] blocks; + return EDLIB_STATUS_OK; + } + //----------------------------------------------------// + + targetChar++; + } + + if (lastBlock == maxNumBlocks - 1) { // If last block of last column was calculated + // Obtain best score from block -> it is complicated because query is padded with W cells + int bestScore = getBlockCellValues(blocks[lastBlock])[static_cast(W)]; + if (bestScore <= k) { + *bestScore_ = bestScore; + *position_ = targetLength - 1; + delete[] blocks; + return EDLIB_STATUS_OK; + } + } + + *bestScore_ = *position_ = -1; + delete[] blocks; + return EDLIB_STATUS_OK; +} + + +/** + * Finds one possible alignment that gives optimal score by moving back through the dynamic programming matrix, + * that is stored in alignData. Consumes large amount of memory: O(queryLength * targetLength). + * @param [in] queryLength Normal length, without W. + * @param [in] targetLength Normal length, without W. + * @param [in] bestScore Best score. + * @param [in] alignData Data obtained during finding best score that is useful for finding alignment. + * @param [out] alignment Alignment. + * @param [out] alignmentLength Length of alignment. + * @return Status code. + */ +static int obtainAlignmentTraceback (const int queryLength, const int targetLength, + const int bestScore, const AlignmentData* const alignData, + unsigned char** const alignment, int* const alignmentLength) { + const int maxNumBlocks = ceilDiv(queryLength, WORD_SIZE); + const int W = maxNumBlocks * WORD_SIZE - queryLength; + + *alignment = static_cast(malloc(static_cast(queryLength + targetLength - 1) * sizeof(unsigned char))); + *alignmentLength = 0; + int c = targetLength - 1; // index of column + int b = maxNumBlocks - 1; // index of block in column + int currScore = bestScore; // Score of current cell + int lScore = -1; // Score of left cell + int uScore = -1; // Score of upper cell + int ulScore = -1; // Score of upper left cell + Word currP = alignData->Ps[c * maxNumBlocks + b]; // P of current block + Word currM = alignData->Ms[c * maxNumBlocks + b]; // M of current block + // True if block to left exists and is in band + bool thereIsLeftBlock = c > 0 && b >= alignData->firstBlocks[c-1] && b <= alignData->lastBlocks[c-1]; + // We set initial values of lP and lM to 0 only to avoid compiler warnings, they should not affect the + // calculation as both lP and lM should be initialized at some moment later (but compiler can not + // detect it since this initialization is guaranteed by "business" logic). + Word lP = 0, lM = 0; + if (thereIsLeftBlock) { + lP = alignData->Ps[(c - 1) * maxNumBlocks + b]; // P of block to the left + lM = alignData->Ms[(c - 1) * maxNumBlocks + b]; // M of block to the left + } + currP <<= W; + currM <<= W; + int blockPos = WORD_SIZE - W - 1; // 0 based index of current cell in blockPos + + // TODO(martin): refactor this whole piece of code. There are too many if-else statements, + // it is too easy for a bug to hide and to hard to effectively cover all the edge-cases. + // We need better separation of logic and responsibilities. + while (true) { + if (c == 0) { + thereIsLeftBlock = true; + lScore = b * WORD_SIZE + blockPos + 1; + ulScore = lScore - 1; + } + + // TODO: improvement: calculate only those cells that are needed, + // for example if I calculate upper cell and can move up, + // there is no need to calculate left and upper left cell + //---------- Calculate scores ---------// + if (lScore == -1 && thereIsLeftBlock) { + lScore = alignData->scores[(c - 1) * maxNumBlocks + b]; // score of block to the left + for (int i = 0; i < WORD_SIZE - blockPos - 1; i++) { + if ((lP & HIGH_BIT_MASK) != 0u) { + lScore--; + } + if ((lM & HIGH_BIT_MASK) != 0u) { + lScore++; + } + lP <<= 1; + lM <<= 1; + } + } + if (ulScore == -1) { + if (lScore != -1) { + ulScore = lScore; + if ((lP & HIGH_BIT_MASK) != 0u) { + ulScore--; + } + if ((lM & HIGH_BIT_MASK) != 0u) { + ulScore++; + } + } + else if (c > 0 && b-1 >= alignData->firstBlocks[c-1] && b-1 <= alignData->lastBlocks[c-1]) { + // This is the case when upper left cell is last cell in block, + // and block to left is not in band so lScore is -1. + ulScore = alignData->scores[(c - 1) * maxNumBlocks + b - 1]; + } + } + if (uScore == -1) { + uScore = currScore; + if ((currP & HIGH_BIT_MASK) != 0u) { + uScore--; + } + if ((currM & HIGH_BIT_MASK) != 0u) { + uScore++; + } + currP <<= 1; + currM <<= 1; + } + //-------------------------------------// + + // TODO: should I check if there is upper block? + + //-------------- Move --------------// + // Move up - insertion to target - deletion from query + if (uScore != -1 && uScore + 1 == currScore) { + currScore = uScore; + lScore = ulScore; + uScore = ulScore = -1; + if (blockPos == 0) { // If entering new (upper) block + if (b == 0) { // If there are no cells above (only boundary cells) + (*alignment)[(*alignmentLength)++] = EDLIB_EDOP_INSERT; // Move up + for (int i = 0; i < c + 1; i++) { // Move left until end + (*alignment)[(*alignmentLength)++] = EDLIB_EDOP_DELETE; + } + break; + } + blockPos = WORD_SIZE - 1; + b--; + currP = alignData->Ps[c * maxNumBlocks + b]; + currM = alignData->Ms[c * maxNumBlocks + b]; + if (c > 0 && b >= alignData->firstBlocks[c-1] && b <= alignData->lastBlocks[c-1]) { + thereIsLeftBlock = true; + lP = alignData->Ps[(c - 1) * maxNumBlocks + b]; // TODO: improve this, too many operations + lM = alignData->Ms[(c - 1) * maxNumBlocks + b]; + } else { + thereIsLeftBlock = false; + // TODO(martin): There may not be left block, but there can be left boundary - do we + // handle this correctly then? Are l and ul score set correctly? + // I should check that / refactor this. + } + } else { + blockPos--; + lP <<= 1; + lM <<= 1; + } + // Mark move + (*alignment)[(*alignmentLength)++] = EDLIB_EDOP_INSERT; + } + // Move left - deletion from target - insertion to query + else if (lScore != -1 && lScore + 1 == currScore) { + currScore = lScore; + uScore = ulScore; + lScore = ulScore = -1; + c--; + if (c == -1) { // If there are no cells to the left (only boundary cells) + (*alignment)[(*alignmentLength)++] = EDLIB_EDOP_DELETE; // Move left + int numUp = b * WORD_SIZE + blockPos + 1; + for (int i = 0; i < numUp; i++) { // Move up until end + (*alignment)[(*alignmentLength)++] = EDLIB_EDOP_INSERT; + } + break; + } + currP = lP; + currM = lM; + if (c > 0 && b >= alignData->firstBlocks[c-1] && b <= alignData->lastBlocks[c-1]) { + thereIsLeftBlock = true; + lP = alignData->Ps[(c - 1) * maxNumBlocks + b]; + lM = alignData->Ms[(c - 1) * maxNumBlocks + b]; + } else { + if (c == 0) { // If there are no cells to the left (only boundary cells) + thereIsLeftBlock = true; + lScore = b * WORD_SIZE + blockPos + 1; + ulScore = lScore - 1; + } else { + thereIsLeftBlock = false; + } + } + // Mark move + (*alignment)[(*alignmentLength)++] = EDLIB_EDOP_DELETE; + } + // Move up left - (mis)match + else if (ulScore != -1) { + unsigned char moveCode = ulScore == currScore ? EDLIB_EDOP_MATCH : EDLIB_EDOP_MISMATCH; + currScore = ulScore; + uScore = lScore = ulScore = -1; + c--; + if (c == -1) { // If there are no cells to the left (only boundary cells) + (*alignment)[(*alignmentLength)++] = moveCode; // Move left + int numUp = b * WORD_SIZE + blockPos; + for (int i = 0; i < numUp; i++) { // Move up until end + (*alignment)[(*alignmentLength)++] = EDLIB_EDOP_INSERT; + } + break; + } + if (blockPos == 0) { // If entering upper left block + if (b == 0) { // If there are no more cells above (only boundary cells) + (*alignment)[(*alignmentLength)++] = moveCode; // Move up left + for (int i = 0; i < c + 1; i++) { // Move left until end + (*alignment)[(*alignmentLength)++] = EDLIB_EDOP_DELETE; + } + break; + } + blockPos = WORD_SIZE - 1; + b--; + currP = alignData->Ps[c * maxNumBlocks + b]; + currM = alignData->Ms[c * maxNumBlocks + b]; + } else { // If entering left block + blockPos--; + currP = lP; + currM = lM; + currP <<= 1; + currM <<= 1; + } + // Set new left block + if (c > 0 && b >= alignData->firstBlocks[c-1] && b <= alignData->lastBlocks[c-1]) { + thereIsLeftBlock = true; + lP = alignData->Ps[(c - 1) * maxNumBlocks + b]; + lM = alignData->Ms[(c - 1) * maxNumBlocks + b]; + } else { + if (c == 0) { // If there are no cells to the left (only boundary cells) + thereIsLeftBlock = true; + lScore = b * WORD_SIZE + blockPos + 1; + ulScore = lScore - 1; + } else { + thereIsLeftBlock = false; + } + } + // Mark move + (*alignment)[(*alignmentLength)++] = moveCode; + } else { + // Reached end - finished! + break; + } + //----------------------------------// + } + + *alignment = static_cast(realloc(*alignment, + static_cast(*alignmentLength) * sizeof(unsigned char))); + std::reverse(*alignment, *alignment + (*alignmentLength)); + return EDLIB_STATUS_OK; +} + + +/** + * Finds one possible alignment that gives optimal score (bestScore). + * It will split problem into smaller problems using Hirschberg's algorithm and when they are small enough, + * it will solve them using traceback algorithm. + * @param [in] query + * @param [in] rQuery Reversed query. + * @param [in] queryLength + * @param [in] target + * @param [in] rTarget Reversed target. + * @param [in] targetLength + * @param [in] alphabetLength + * @param [in] bestScore Best(optimal) score. + * @param [out] alignment Sequence of edit operations that make target equal to query. + * @param [out] alignmentLength Length of alignment. + * @return Status code. + */ +static int obtainAlignment ( + const unsigned char* const query, const unsigned char* const rQuery, const int queryLength, + const unsigned char* const target, const unsigned char* const rTarget, const int targetLength, + const int alphabetLength, const int bestScore, + unsigned char** const alignment, int* const alignmentLength) { + + // Handle special case when one of sequences has length of 0. + if (queryLength == 0 || targetLength == 0) { + *alignmentLength = targetLength + queryLength; + *alignment = static_cast(malloc(static_cast(*alignmentLength) * sizeof(unsigned char))); + for (int i = 0; i < *alignmentLength; i++) { + (*alignment)[i] = queryLength == 0 ? EDLIB_EDOP_DELETE : EDLIB_EDOP_INSERT; + } + return EDLIB_STATUS_OK; + } + + const int maxNumBlocks = ceilDiv(queryLength, WORD_SIZE); + const int W = maxNumBlocks * WORD_SIZE - queryLength; + int statusCode; + + // TODO: think about reducing number of memory allocations in alignment functions, probably + // by sharing some memory that is allocated only once. That refers to: Peq, columns in Hirschberg, + // and it could also be done for alignments - we could have one big array for alignment that would be + // sparsely populated by each of steps in recursion, and at the end we would just consolidate those results. + + // If estimated memory consumption for traceback algorithm is smaller than 1MB use it, + // otherwise use Hirschberg's algorithm. By running few tests I choose boundary of 1MB as optimal. + auto tl = static_cast(targetLength); + long long alignmentDataSize = static_cast(2 * sizeof(Word) + sizeof(int)) + * static_cast(maxNumBlocks) * tl + 2LL * sizeof(int) * tl; + if (alignmentDataSize < 1024 * 1024) { + int score_, endLocation_; // Used only to call function. + AlignmentData* alignData = nullptr; + Word* Peq = buildPeq(alphabetLength, query, queryLength); + myersCalcEditDistanceNW(Peq, W, maxNumBlocks, + query, queryLength, + target, targetLength, + alphabetLength, bestScore, + &score_, &endLocation_, true, &alignData, -1); + assert(score_ == bestScore); + assert(endLocation_ == targetLength - 1); + + statusCode = obtainAlignmentTraceback(queryLength, targetLength, + bestScore, alignData, + alignment, alignmentLength); + delete alignData; + delete[] Peq; + } else { + statusCode = obtainAlignmentHirschberg(query, rQuery, queryLength, + target, rTarget, targetLength, + alphabetLength, bestScore, + alignment, alignmentLength); + } + return statusCode; +} + + +/** + * Finds one possible alignment that gives optimal score (bestScore). + * Uses Hirschberg's algorithm to split problem into two sub-problems, solve them and combine them together. + * @param [in] query + * @param [in] rQuery Reversed query. + * @param [in] queryLength + * @param [in] target + * @param [in] rTarget Reversed target. + * @param [in] targetLength + * @param [in] alphabetLength + * @param [in] bestScore Best(optimal) score. + * @param [out] alignment Sequence of edit operations that make target equal to query. + * @param [out] alignmentLength Length of alignment. + * @return Status code. + */ +static int obtainAlignmentHirschberg ( + const unsigned char* const query, const unsigned char* const rQuery, const int queryLength, + const unsigned char* const target, const unsigned char* const rTarget, const int targetLength, + const int alphabetLength, const int bestScore, + unsigned char** const alignment, int* const alignmentLength) { + + const int maxNumBlocks = ceilDiv(queryLength, WORD_SIZE); + const int W = maxNumBlocks * WORD_SIZE - queryLength; + + Word* Peq = buildPeq(alphabetLength, query, queryLength); + Word* rPeq = buildPeq(alphabetLength, rQuery, queryLength); + + // Used only to call functions. + int score_, endLocation_; + + // Divide dynamic matrix into two halfs, left and right. + const int leftHalfWidth = targetLength / 2; + const int rightHalfWidth = targetLength - leftHalfWidth; + + // Calculate left half. + AlignmentData* alignDataLeftHalf = nullptr; + int leftHalfCalcStatus = myersCalcEditDistanceNW( + Peq, W, maxNumBlocks, + query, queryLength, + target, targetLength, + alphabetLength, bestScore, + &score_, &endLocation_, false, &alignDataLeftHalf, leftHalfWidth - 1); + + // Calculate right half. + AlignmentData* alignDataRightHalf = nullptr; + int rightHalfCalcStatus = myersCalcEditDistanceNW( + rPeq, W, maxNumBlocks, + rQuery, queryLength, + rTarget, targetLength, + alphabetLength, bestScore, + &score_, &endLocation_, false, &alignDataRightHalf, rightHalfWidth - 1); + + delete[] Peq; + delete[] rPeq; + + if (leftHalfCalcStatus == EDLIB_STATUS_ERROR || rightHalfCalcStatus == EDLIB_STATUS_ERROR) { + if (alignDataLeftHalf != nullptr) { + delete alignDataLeftHalf; + } + if (alignDataRightHalf != nullptr) { + delete alignDataRightHalf; + } + return EDLIB_STATUS_ERROR; + } + + // Unwrap the left half. + int firstBlockIdxLeft = alignDataLeftHalf->firstBlocks[0]; + int lastBlockIdxLeft = alignDataLeftHalf->lastBlocks[0]; + // TODO: avoid this allocation by using some shared array? + // scoresLeft contains scores from left column, starting with scoresLeftStartIdx row (query index) + // and ending with scoresLeftEndIdx row (0-indexed). + int scoresLeftLength = (lastBlockIdxLeft - firstBlockIdxLeft + 1) * WORD_SIZE; + auto* scoresLeft = new int[static_cast(scoresLeftLength)]; + for (int blockIdx = firstBlockIdxLeft; blockIdx <= lastBlockIdxLeft; blockIdx++) { + Block block(alignDataLeftHalf->Ps[blockIdx], alignDataLeftHalf->Ms[blockIdx], + alignDataLeftHalf->scores[blockIdx]); + readBlock(block, scoresLeft + (blockIdx - firstBlockIdxLeft) * WORD_SIZE); + } + int scoresLeftStartIdx = firstBlockIdxLeft * WORD_SIZE; + // If last block contains padding, shorten the length of scores for the length of padding. + if (lastBlockIdxLeft == maxNumBlocks - 1) { + scoresLeftLength -= W; + } + + // Unwrap the right half (I also reverse it while unwraping). + int firstBlockIdxRight = alignDataRightHalf->firstBlocks[0]; + int lastBlockIdxRight = alignDataRightHalf->lastBlocks[0]; + int scoresRightLength = (lastBlockIdxRight - firstBlockIdxRight + 1) * WORD_SIZE; + auto* scoresRight = new int[static_cast(scoresRightLength)]; + int* scoresRightOriginalStart = scoresRight; + for (int blockIdx = firstBlockIdxRight; blockIdx <= lastBlockIdxRight; blockIdx++) { + Block block(alignDataRightHalf->Ps[blockIdx], alignDataRightHalf->Ms[blockIdx], + alignDataRightHalf->scores[blockIdx]); + readBlockReverse(block, scoresRight + (lastBlockIdxRight - blockIdx) * WORD_SIZE); + } + int scoresRightStartIdx = queryLength - (lastBlockIdxRight + 1) * WORD_SIZE; + // If there is padding at the beginning of scoresRight (that can happen because of reversing that we do), + // move pointer forward to remove the padding (that is why we remember originalStart). + if (scoresRightStartIdx < 0) { + assert(scoresRightStartIdx == -1 * W); + scoresRight += W; + scoresRightStartIdx += W; + scoresRightLength -= W; + } + + delete alignDataLeftHalf; + delete alignDataRightHalf; + + //--------------------- Find the best move ----------------// + // Find the query/row index of cell in left column which together with its lower right neighbour + // from right column gives the best score (when summed). We also have to consider boundary cells + // (those cells at -1 indexes). + // x| + // -+- + // |x + int queryIdxLeftStart = max(scoresLeftStartIdx, scoresRightStartIdx - 1); + int queryIdxLeftEnd = min(scoresLeftStartIdx + scoresLeftLength - 1, + scoresRightStartIdx + scoresRightLength - 2); + int leftScore = 0; + int rightScore = 0; + int queryIdxLeftAlignment = 0; // Query/row index of cell in left column where alignment is passing through. + bool queryIdxLeftAlignmentFound = false; + for (int queryIdx = queryIdxLeftStart; queryIdx <= queryIdxLeftEnd; queryIdx++) { + leftScore = scoresLeft[queryIdx - scoresLeftStartIdx]; + rightScore = scoresRight[queryIdx + 1 - scoresRightStartIdx]; + if (leftScore + rightScore == bestScore) { + queryIdxLeftAlignment = queryIdx; + queryIdxLeftAlignmentFound = true; + break; + } + } + // Check boundary cells. + if (!queryIdxLeftAlignmentFound && scoresLeftStartIdx == 0 && scoresRightStartIdx == 0) { + leftScore = leftHalfWidth; + rightScore = scoresRight[0]; + if (leftScore + rightScore == bestScore) { + queryIdxLeftAlignment = -1; + queryIdxLeftAlignmentFound = true; + } + } + if (!queryIdxLeftAlignmentFound && scoresLeftStartIdx + scoresLeftLength == queryLength + && scoresRightStartIdx + scoresRightLength == queryLength) { + leftScore = scoresLeft[scoresLeftLength - 1]; + rightScore = rightHalfWidth; + if (leftScore + rightScore == bestScore) { + queryIdxLeftAlignment = queryLength - 1; + queryIdxLeftAlignmentFound = true; + } + } + + delete[] scoresLeft; + delete[] scoresRightOriginalStart; + + if (!queryIdxLeftAlignmentFound) { + // If there was no move that is part of optimal alignment, then there is no such alignment + // or given bestScore is not correct! + return EDLIB_STATUS_ERROR; + } + //----------------------------------------------------------// + + // Calculate alignments for upper half of left half (upper left - ul) + // and lower half of right half (lower right - lr). + const int ulHeight = queryIdxLeftAlignment + 1; + const int lrHeight = queryLength - ulHeight; + const int ulWidth = leftHalfWidth; + const int lrWidth = rightHalfWidth; + unsigned char* ulAlignment = nullptr; + int ulAlignmentLength; + int ulStatusCode = obtainAlignment(query, rQuery + lrHeight, ulHeight, + target, rTarget + lrWidth, ulWidth, + alphabetLength, leftScore, &ulAlignment, &ulAlignmentLength); + unsigned char* lrAlignment = nullptr; + int lrAlignmentLength; + int lrStatusCode = obtainAlignment(query + ulHeight, rQuery, lrHeight, + target + ulWidth, rTarget, lrWidth, + alphabetLength, rightScore, &lrAlignment, &lrAlignmentLength); + if (ulStatusCode == EDLIB_STATUS_ERROR || lrStatusCode == EDLIB_STATUS_ERROR) { + if (ulAlignment != nullptr) { + free(ulAlignment); + } + if (lrAlignment != nullptr) { + free(lrAlignment); + } + return EDLIB_STATUS_ERROR; + } + + // Build alignment by concatenating upper left alignment with lower right alignment. + *alignmentLength = ulAlignmentLength + lrAlignmentLength; + *alignment = static_cast(malloc(static_cast(*alignmentLength) * sizeof(unsigned char))); + memcpy(*alignment, ulAlignment, static_cast(ulAlignmentLength)); + memcpy(*alignment + ulAlignmentLength, lrAlignment, static_cast(lrAlignmentLength)); + + free(ulAlignment); + free(lrAlignment); + return EDLIB_STATUS_OK; +} + + +/** + * Takes char query and char target, recognizes alphabet and transforms them into unsigned char sequences + * where elements in sequences are not any more letters of alphabet, but their index in alphabet. + * Most of internal edlib functions expect such transformed sequences. + * This function will allocate queryTransformed and targetTransformed, so make sure to free them when done. + * Example: + * Original sequences: "ACT" and "CGT". + * Alphabet would be recognized as ['A', 'C', 'T', 'G']. Alphabet length = 4. + * Transformed sequences: [0, 1, 2] and [1, 3, 2]. + * @param [in] queryOriginal + * @param [in] queryLength + * @param [in] targetOriginal + * @param [in] targetLength + * @param [out] queryTransformed It will contain values in range [0, alphabet length - 1]. + * @param [out] targetTransformed It will contain values in range [0, alphabet length - 1]. + * @return Alphabet length - number of letters in recognized alphabet. + */ +static int transformSequences (const char* const queryOriginal, const int queryLength, + const char* const targetOriginal, const int targetLength, + unsigned char** const queryTransformed, + unsigned char** const targetTransformed) { + // Alphabet is constructed from letters that are present in sequences. + // Each letter is assigned an ordinal number, starting from 0 up to alphabetLength - 1, + // and new query and target are created in which letters are replaced with their ordinal numbers. + // This query and target are used in all the calculations later. + *queryTransformed = static_cast(malloc(sizeof(unsigned char) + * static_cast(queryLength))); + *targetTransformed = static_cast(malloc(sizeof(unsigned char) + * static_cast(targetLength))); + + // Alphabet information, it is constructed on fly while transforming sequences. + unsigned char letterIdx[256]; //!< letterIdx[c] is index of letter c in alphabet + bool inAlphabet[256]; // inAlphabet[c] is true if c is in alphabet + for (bool & i : inAlphabet) { + i = false; + } + int alphabetLength = 0; + + for (int i = 0; i < queryLength; i++) { + auto c = static_cast(queryOriginal[i]); + if (!inAlphabet[c]) { + inAlphabet[c] = true; + letterIdx[c] = static_cast(alphabetLength); + alphabetLength++; + } + (*queryTransformed)[i] = letterIdx[c]; + } + for (int i = 0; i < targetLength; i++) { + auto c = static_cast(targetOriginal[i]); + if (!inAlphabet[c]) { + inAlphabet[c] = true; + letterIdx[c] = static_cast(alphabetLength); + alphabetLength++; + } + (*targetTransformed)[i] = letterIdx[c]; + } + + return alphabetLength; +} + + +EdlibAlignConfig edlibNewAlignConfig (int k, EdlibAlignMode mode, EdlibAlignTask task) { + EdlibAlignConfig config; + config.k = k; + config.mode = mode; + config.task = task; + return config; +} + + +EdlibAlignConfig edlibDefaultAlignConfig (void) { + return edlibNewAlignConfig(-1, EDLIB_MODE_NW, EDLIB_TASK_DISTANCE); +} + + +void edlibFreeAlignResult (EdlibAlignResult result) { + if (result.endLocations != nullptr) { + free(result.endLocations); + } + if (result.startLocations != nullptr) { + free(result.startLocations); + } + if (result.alignment != nullptr) { + free(result.alignment); + } +} diff --git a/src/edlib.h b/src/edlib.h new file mode 100755 index 0000000..dd30b38 --- /dev/null +++ b/src/edlib.h @@ -0,0 +1,221 @@ +#ifndef EDLIB_H +#define EDLIB_H + +/** + * @file + * @author Martin Sosic + * @brief Main header file, containing all public functions and structures. + */ + +#ifdef __cplusplus +extern "C" { +#endif + +// Status codes +#define EDLIB_STATUS_OK 0 +#define EDLIB_STATUS_ERROR 1 + +/** + * Alignment methods - how should Edlib treat gaps before and after query? + */ +typedef enum { + /** + * Global method. This is the standard method. + * Useful when you want to find out how similar is first sequence to second sequence. + */ + EDLIB_MODE_NW, + /** + * Prefix method. Similar to global method, but with a small twist - gap at query end is not penalized. + * What that means is that deleting elements from the end of second sequence is "free"! + * For example, if we had "AACT" and "AACTGGC", edit distance would be 0, because removing "GGC" from the end + * of second sequence is "free" and does not count into total edit distance. This method is appropriate + * when you want to find out how well first sequence fits at the beginning of second sequence. + */ + EDLIB_MODE_SHW, + /** + * Infix method. Similar as prefix method, but with one more twist - gaps at query end and start are + * not penalized. What that means is that deleting elements from the start and end of second sequence is "free"! + * For example, if we had ACT and CGACTGAC, edit distance would be 0, because removing CG from the start + * and GAC from the end of second sequence is "free" and does not count into total edit distance. + * This method is appropriate when you want to find out how well first sequence fits at any part of + * second sequence. + * For example, if your second sequence was a long text and your first sequence was a sentence from that text, + * but slightly scrambled, you could use this method to discover how scrambled it is and where it fits in + * that text. In bioinformatics, this method is appropriate for aligning read to a sequence. + */ + EDLIB_MODE_HW +} EdlibAlignMode; + +/** + * Alignment tasks - what do you want Edlib to do? + */ +typedef enum { + EDLIB_TASK_DISTANCE, //!< Find edit distance and end locations. + EDLIB_TASK_LOC, //!< Find edit distance, end locations and start locations. + EDLIB_TASK_PATH //!< Find edit distance, end locations and start locations and alignment path. +} EdlibAlignTask; + +/** + * Describes cigar format. + * @see http://samtools.github.io/hts-specs/SAMv1.pdf + * @see http://drive5.com/usearch/manual/cigar.html + */ +typedef enum { + EDLIB_CIGAR_STANDARD, //!< Match: 'M', Insertion: 'I', Deletion: 'D', Mismatch: 'M'. + EDLIB_CIGAR_EXTENDED //!< Match: '=', Insertion: 'I', Deletion: 'D', Mismatch: 'X'. +} EdlibCigarFormat; + + +// Edit operations. +#define EDLIB_EDOP_MATCH 0 //!< Match. +#define EDLIB_EDOP_INSERT 1 //!< Insertion to target = deletion from query. +#define EDLIB_EDOP_DELETE 2 //!< Deletion from target = insertion to query. +#define EDLIB_EDOP_MISMATCH 3 //!< Mismatch. + + + /** + * @brief Configuration object for edlibAlign() function. + */ + typedef struct { + /** + * Set k to non-negative value to tell edlib that edit distance is not larger than k. + * Smaller k can significantly improve speed of computation. + * If edit distance is larger than k, edlib will set edit distance to -1. + * Set k to negative value and edlib will internally auto-adjust k until score is found. + */ + int k; + + /** + * Alignment method. + * EDLIB_MODE_NW: global (Needleman-Wunsch) + * EDLIB_MODE_SHW: prefix. Gap after query is not penalized. + * EDLIB_MODE_HW: infix. Gaps before and after query are not penalized. + */ + EdlibAlignMode mode; + + /** + * Alignment task - tells Edlib what to calculate. Less to calculate, faster it is. + * EDLIB_TASK_DISTANCE - find edit distance and end locations of optimal alignment paths in target. + * EDLIB_TASK_LOC - find edit distance and start and end locations of optimal alignment paths in target. + * EDLIB_TASK_PATH - find edit distance, alignment path (and start and end locations of it in target). + */ + EdlibAlignTask task; + } EdlibAlignConfig; + + /** + * Helper method for easy construction of configuration object. + * @return Configuration object filled with given parameters. + */ + EdlibAlignConfig edlibNewAlignConfig (int k, EdlibAlignMode mode, EdlibAlignTask task); + + /** + * @return Default configuration object, with following defaults: + * k = -1, mode = EDLIB_MODE_NW, task = EDLIB_TASK_DISTANCE. + */ + EdlibAlignConfig edlibDefaultAlignConfig (void); + + + /** + * Container for results of alignment done by edlibAlign() function. + */ + typedef struct { + /** + * -1 if k is non-negative and edit distance is larger than k. + */ + int editDistance; + /** + * Array of zero-based positions in target where optimal alignment paths end. + * If gap after query is penalized, gap counts as part of query (NW), otherwise not. + * Set to NULL if edit distance is larger than k. + * If you do not free whole result object using edlibFreeAlignResult(), do not forget to use free(). + */ + int* endLocations; + /** + * Array of zero-based positions in target where optimal alignment paths start, + * they correspond to endLocations. + * If gap before query is penalized, gap counts as part of query (NW), otherwise not. + * Set to NULL if not calculated or if edit distance is larger than k. + * If you do not free whole result object using edlibFreeAlignResult(), do not forget to use free(). + */ + int* startLocations; + /** + * Number of end (and start) locations. + */ + int numLocations; + /** + * Alignment is found for first pair of start and end locations. + * Set to NULL if not calculated. + * Alignment is sequence of numbers: 0, 1, 2, 3. + * 0 stands for match. + * 1 stands for insertion to target. + * 2 stands for insertion to query. + * 3 stands for mismatch. + * Alignment aligns query to target from begining of query till end of query. + * If gaps are not penalized, they are not in alignment. + * If you do not free whole result object using edlibFreeAlignResult(), do not forget to use free(). + */ + unsigned char* alignment; + /** + * Length of alignment. + */ + int alignmentLength; + /** + * Number of different characters in query and target together. + */ + int alphabetLength; + } EdlibAlignResult; + + /** + * Frees memory in EdlibAlignResult that was allocated by edlib. + * If you do not use it, make sure to free needed members manually using free(). + */ + void edlibFreeAlignResult (EdlibAlignResult result); + + + /** + * Aligns two sequences (queryOriginal and target) using edit distance (levenshtein distance). + * Through config parameter, this function supports different alignment methods (global, prefix, infix), + * as well as different modes of search (tasks). + * It always returns edit distance and end locations of optimal alignment in target. + * It optionally returns start locations of optimal alignment in target and alignment path, + * if you choose appropriate tasks. + * @param [in] queryOriginal First sequence. + * @param [in] queryLength Number of characters in first sequence. + * @param [in] target Second sequence. + * @param [in] targetLength Number of characters in second sequence. + * @param [in] config Additional alignment parameters, like alignment method and wanted results. + * @return Result of alignment, which can contain edit distance, start and end locations and alignment path. + * Make sure to clean up the object using edlibFreeAlignResult() or by manually freeing needed members. + */ + EdlibAlignResult edlibAlign (const char* queryOriginal, int queryLength, + const char* target, int targetLength, + const EdlibAlignConfig config); + + + /** + * Builds cigar string from given alignment sequence. + * @param [in] alignment Alignment sequence. + * 0 stands for match. + * 1 stands for insertion to target. + * 2 stands for insertion to query. + * 3 stands for mismatch. + * @param [in] alignmentLength + * @param [in] cigarFormat Cigar will be returned in specified format. + * @return Cigar string. + * I stands for insertion. + * D stands for deletion. + * X stands for mismatch. (used only in extended format) + * = stands for match. (used only in extended format) + * M stands for (mis)match. (used only in standard format) + * String is null terminated. + * Needed memory is allocated and given pointer is set to it. + * Do not forget to free it later using free()! + */ + char* edlibAlignmentToCigar (const unsigned char* alignment, int alignmentLength, + EdlibCigarFormat cigarFormat); + +#ifdef __cplusplus +} +#endif + +#endif // EDLIB_H diff --git a/src/expokit.f b/src/expokit.f new file mode 100644 index 0000000..65f69b8 --- /dev/null +++ b/src/expokit.f @@ -0,0 +1,4626 @@ +*----------------------------------------------------------------------| + subroutine DMEXPV( n, m, t, v, w, tol, anorm, + . wsp,lwsp, iwsp,liwsp, matvec, itrace,iflag ) + + implicit none + integer n, m, lwsp, liwsp, itrace, iflag, iwsp(liwsp) + double precision t, tol, anorm, v(n), w(n), wsp(lwsp) + external matvec + +*-----Purpose----------------------------------------------------------| +* +*--- DMEXPV computes w = exp(t*A)*v - Customised for MARKOV CHAINS. +* +* It does not compute the matrix exponential in isolation but +* instead, it computes directly the action of the exponential +* operator on the operand vector. This way of doing so allows +* for addressing large sparse problems. +* +* The method used is based on Krylov subspace projection +* techniques and the matrix under consideration interacts only +* via the external routine `matvec' performing the matrix-vector +* product (matrix-free method). +* +* This is a customised version for Markov Chains. This means that a +* check is done within this code to ensure that the resulting vector +* w is a probability vector, i.e., w must have all its components +* in [0,1], with sum equal to 1. This check is done at some expense +* and the user may try DGEXPV which is cheaper since it ignores +* probability constraints. +* +* IMPORTANT: The check assumes that the transition rate matrix Q +* satisfies Qe = 0, where e=(1,...,1)'. Don't use DMEXPV +* if this condition does not hold. Use DGEXPV instead. +* DMEXPV/DGEXPV require the matrix-vector product +* y = A*x = Q'*x, i.e, the TRANSPOSE of Q times a vector. +* Failure to remember this leads to wrong results. +* +*-----Arguments--------------------------------------------------------| +* +* n : (input) order of the principal matrix A. +* +* m : (input) maximum size for the Krylov basis. +* +* t : (input) time at wich the solution is needed (can be < 0). +* +* v(n) : (input) given operand vector. +* +* w(n) : (output) computed approximation of exp(t*A)*v. +* +* tol : (input/output) the requested acurracy tolerance on w. +* If on input tol=0.0d0 or tol is too small (tol.le.eps) +* the internal value sqrt(eps) is used, and tol is set to +* sqrt(eps) on output (`eps' denotes the machine epsilon). +* (`Happy breakdown' is assumed if h(j+1,j) .le. anorm*tol) +* +* anorm : (input) an approximation of some norm of A. +* +* wsp(lwsp): (workspace) lwsp .ge. n*(m+1)+n+(m+2)^2+4*(m+2)^2+ideg+1 +* +---------+-------+---------------+ +* (actually, ideg=6) V H wsp for PADE +* +* iwsp(liwsp): (workspace) liwsp .ge. m+2 +* +* matvec : external subroutine for matrix-vector multiplication. +* synopsis: matvec( x, y ) +* double precision x(*), y(*) +* computes: y(1:n) <- A*x(1:n) +* where A is the principal matrix. +* +* IMPORTANT: DMEXPV requires the product y = Ax = Q'x, i.e. +* the TRANSPOSE of the transition rate matrix. +* +* itrace : (input) running mode. 0=silent, 1=print step-by-step info +* +* iflag : (output) exit flag. +* <0 - bad input arguments +* 0 - no problem +* 1 - maximum number of steps reached without convergence +* 2 - requested tolerance was too high +* +*-----Accounts on the computation--------------------------------------| +* Upon exit, an interested user may retrieve accounts on the +* computations. They are located in the workspace arrays wsp and +* iwsp as indicated below: +* +* location mnemonic description +* -----------------------------------------------------------------| +* iwsp(1) = nmult, number of matrix-vector multiplications used +* iwsp(2) = nexph, number of Hessenberg matrix exponential evaluated +* iwsp(3) = nscale, number of repeated squaring involved in Pade +* iwsp(4) = nstep, number of integration steps used up to completion +* iwsp(5) = nreject, number of rejected step-sizes +* iwsp(6) = ibrkflag, set to 1 if `happy breakdown' and 0 otherwise +* iwsp(7) = mbrkdwn, if `happy brkdown', basis-size when it occured +* -----------------------------------------------------------------| +* wsp(1) = step_min, minimum step-size used during integration +* wsp(2) = step_max, maximum step-size used during integration +* wsp(3) = x_round, maximum among all roundoff errors (lower bound) +* wsp(4) = s_round, sum of roundoff errors (lower bound) +* wsp(5) = x_error, maximum among all local truncation errors +* wsp(6) = s_error, global sum of local truncation errors +* wsp(7) = tbrkdwn, if `happy breakdown', time when it occured +* wsp(8) = t_now, integration domain successfully covered +* wsp(9) = hump, i.e., max||exp(sA)||, s in [0,t] (or [t,0] if t<0) +* wsp(10) = ||w||/||v||, scaled norm of the solution w. +* -----------------------------------------------------------------| +* The `hump' is a measure of the conditioning of the problem. The +* matrix exponential is well-conditioned if hump = 1, whereas it is +* poorly-conditioned if hump >> 1. However the solution can still be +* relatively fairly accurate even when the hump is large (the hump +* is an upper bound), especially when the hump and the scaled norm +* of w [this is also computed and returned in wsp(10)] are of the +* same order of magnitude (further details in reference below). +* Markov chains are usually well-conditioned problems. +* +*----------------------------------------------------------------------| +*-----The following parameters may also be adjusted herein-------------| +* + integer mxstep, mxreject, ideg + double precision delta, gamma + parameter( mxstep = 500, + . mxreject = 0, + . ideg = 6, + . delta = 1.2d0, + . gamma = 0.9d0 ) + +* mxstep : maximum allowable number of integration steps. +* The value 0 means an infinite number of steps. +* +* mxreject: maximum allowable number of rejections at each step. +* The value 0 means an infinite number of rejections. +* +* ideg : the Pade approximation of type (ideg,ideg) is used as +* an approximation to exp(H). The value 0 switches to the +* uniform rational Chebyshev approximation of type (14,14) +* +* delta : local truncation error `safety factor' +* +* gamma : stepsize `shrinking factor' +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + integer i, j, k1, mh, mx, iv, ih, j1v, ns, ifree, lfree, iexph, + . ireject,ibrkflag,mbrkdwn, nmult, nreject, nexph, nscale, + . nstep + double precision sgn, t_out, tbrkdwn, step_min,step_max, err_loc, + . s_error, x_error, t_now, t_new, t_step, t_old, + . xm, beta, break_tol, p1, p2, p3, eps, rndoff, + . vnorm, avnorm, hj1j, hij, hump, SQR1, + . roundoff, s_round, x_round + + intrinsic AINT,ABS,DBLE,LOG10,MAX,MIN,NINT,SIGN,SQRT + double precision DDOT, DNRM2, DASUM + +*--- check restrictions on input parameters ... + iflag = 0 + if ( lwsp.lt.n*(m+2)+5*(m+2)**2+ideg+1 ) iflag = -1 + if ( liwsp.lt.m+2 ) iflag = -2 + if ( m.ge.n .or. m.le.0 ) iflag = -3 + if ( iflag.ne.0 ) stop 'bad sizes (in input of DMEXPV)' +* +*--- initialisations ... +* + k1 = 2 + mh = m + 2 + iv = 1 + ih = iv + n*(m+1) + n + ifree = ih + mh*mh + lfree = lwsp - ifree + 1 + + ibrkflag = 0 + mbrkdwn = m + nmult = 0 + nreject = 0 + nexph = 0 + nscale = 0 + + sgn = SIGN( 1.0d0,t ) + t_out = ABS( t ) + tbrkdwn = 0.0d0 + step_min = t_out + step_max = 0.0d0 + nstep = 0 + s_error = 0.0d0 + s_round = 0.0d0 + x_error = 0.0d0 + x_round = 0.0d0 + t_now = 0.0d0 + t_new = 0.0d0 + + p1 = 4.0d0/3.0d0 + 1 p2 = p1 - 1.0d0 + p3 = p2 + p2 + p2 + eps = ABS( p3-1.0d0 ) + if ( eps.eq.0.0d0 ) go to 1 + if ( tol.le.eps ) tol = SQRT( eps ) + rndoff = eps*anorm + + break_tol = 1.0d-7 +*>>> break_tol = tol +*>>> break_tol = anorm*tol + + call DCOPY( n, v,1, w,1 ) + beta = DNRM2( n, w,1 ) + vnorm = beta + hump = beta +* +*--- obtain the very first stepsize ... +* + SQR1 = SQRT( 0.1d0 ) + xm = 1.0d0/DBLE( m ) + p1 = tol*(((m+1)/2.72D0)**(m+1))*SQRT(2.0D0*3.14D0*(m+1)) + t_new = (1.0d0/anorm)*(p1/(4.0d0*beta*anorm))**xm + p1 = 10.0d0**(NINT( LOG10( t_new )-SQR1 )-1) + t_new = AINT( t_new/p1 + 0.55d0 ) * p1 +* +*--- step-by-step integration ... +* + 100 if ( t_now.ge.t_out ) goto 500 + + nstep = nstep + 1 + t_step = MIN( t_out-t_now, t_new ) + + p1 = 1.0d0/beta + do i = 1,n + wsp(iv + i-1) = p1*w(i) + enddo + do i = 1,mh*mh + wsp(ih+i-1) = 0.0d0 + enddo +* +*--- Arnoldi loop ... +* + j1v = iv + n + do 200 j = 1,m + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + do i = 1,j + hij = DDOT( n, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + call DAXPY( n, -hij, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + wsp(ih+(j-1)*mh+i-1) = hij + enddo + hj1j = DNRM2( n, wsp(j1v),1 ) +*--- if `happy breakdown' go straightforward at the end ... + if ( hj1j.le.break_tol ) then + print*,'happy breakdown: mbrkdwn =',j,' h =',hj1j + k1 = 0 + ibrkflag = 1 + mbrkdwn = j + tbrkdwn = t_now + t_step = t_out-t_now + goto 300 + endif + wsp(ih+(j-1)*mh+j) = hj1j + call DSCAL( n, 1.0d0/hj1j, wsp(j1v),1 ) + j1v = j1v + n + 200 continue + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + avnorm = DNRM2( n, wsp(j1v),1 ) +* +*--- set 1 for the 2-corrected scheme ... +* + 300 continue + wsp(ih+m*mh+m+1) = 1.0d0 +* +*--- loop while ireject>>> iexph : (output) number such that wsp(iexph) points to exp(tH) +* i.e., exp(tH) is located at wsp(iexph ... iexph+m*m-1) +* ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ +* NOTE: if the routine was called with wsp(iptr), +* then exp(tH) will start at wsp(iptr+iexph-1). +* +* ns : (output) number of scaling-squaring used. +* +* iflag : (output) exit flag. +* 0 - no problem +* <0 - problem +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + integer mm,i,j,k,ih2,ip,iq,iused,ifree,iodd,icoef,iput,iget + double precision hnorm,scale,scale2,cp,cq + + intrinsic INT,ABS,DBLE,LOG,MAX + +*--- check restrictions on input parameters ... + mm = m*m + iflag = 0 + if ( ldh.lt.m ) iflag = -1 + if ( lwsp.lt.4*mm+ideg+1 ) iflag = -2 + if ( iflag.ne.0 ) stop 'bad sizes (in input of DSPADM)' +* +*--- initialise pointers ... +* + icoef = 1 + ih2 = icoef + (ideg+1) + ip = ih2 + mm + iq = ip + mm + ifree = iq + mm +* +*--- scaling: seek ns such that ||t*H/2^ns|| < 1/2; +* and set scale = t/2^ns ... +* + do i = 1,m + wsp(i) = 0.0d0 + enddo + do j = 1,m + do i = 1,m + wsp(i) = wsp(i) + ABS( H(i,j) ) + enddo + enddo + hnorm = 0.0d0 + do i = 1,m + hnorm = MAX( hnorm,wsp(i) ) + enddo + hnorm = ABS( t*hnorm ) + if ( hnorm.eq.0.0d0 ) stop 'Error - null H in input of DSPADM.' + ns = MAX( 0,INT(LOG(hnorm)/LOG(2.0d0))+2 ) + scale = t / DBLE(2**ns) + scale2 = scale*scale +* +*--- compute Pade coefficients ... +* + i = ideg+1 + j = 2*ideg+1 + wsp(icoef) = 1.0d0 + do k = 1,ideg + wsp(icoef+k) = (wsp(icoef+k-1)*DBLE( i-k ))/DBLE( k*(j-k) ) + enddo +* +*--- H2 = scale2*H*H ... +* + call DGEMM( 'n','n',m,m,m,scale2,H,ldh,H,ldh,0.0d0,wsp(ih2),m ) +* +*--- initialize p (numerator) and q (denominator) ... +* + cp = wsp(icoef+ideg-1) + cq = wsp(icoef+ideg) + do j = 1,m + do i = 1,m + wsp(ip + (j-1)*m + i-1) = 0.0d0 + wsp(iq + (j-1)*m + i-1) = 0.0d0 + enddo + wsp(ip + (j-1)*(m+1)) = cp + wsp(iq + (j-1)*(m+1)) = cq + enddo +* +*--- Apply Horner rule ... +* + iodd = 1 + k = ideg - 1 + 100 continue + iused = iodd*iq + (1-iodd)*ip + call DGEMM( 'n','n',m,m,m, 1.0d0,wsp(iused),m, + . wsp(ih2),m, 0.0d0,wsp(ifree),m ) + do j = 1,m + wsp(ifree+(j-1)*(m+1)) = wsp(ifree+(j-1)*(m+1))+wsp(icoef+k-1) + enddo + ip = (1-iodd)*ifree + iodd*ip + iq = iodd*ifree + (1-iodd)*iq + ifree = iused + iodd = 1-iodd + k = k-1 + if ( k.gt.0 ) goto 100 +* +*--- Obtain (+/-)(I + 2*(p\q)) ... +* + if ( iodd .eq. 1 ) then + call DGEMM( 'n','n',m,m,m, scale,wsp(iq),m, + . H,ldh, 0.0d0,wsp(ifree),m ) + iq = ifree + else + call DGEMM( 'n','n',m,m,m, scale,wsp(ip),m, + . H,ldh, 0.0d0,wsp(ifree),m ) + ip = ifree + endif + call DAXPY( mm, -1.0d0,wsp(ip),1, wsp(iq),1 ) + call DSYSV( 'U',m,m,wsp(iq),m,ipiv,wsp(ip),m,wsp(ih2),mm,iflag ) + if ( iflag.ne.0 ) stop 'Problem in DSYSV (within DSPADM)' + call DSCAL( mm, 2.0d0, wsp(ip), 1 ) + do j = 1,m + wsp(ip+(j-1)*(m+1)) = wsp(ip+(j-1)*(m+1)) + 1.0d0 + enddo + iput = ip + if ( ns.eq.0 .and. iodd.eq.1 ) then + call DSCAL( mm, -1.0d0, wsp(ip), 1 ) + goto 200 + endif +* +*-- squaring : exp(t*H) = (exp(t*H))^(2^ns) ... +* + iodd = 1 + do k = 1,ns + iget = iodd*ip + (1-iodd)*iq + iput = (1-iodd)*ip + iodd*iq + call DGEMM( 'n','n',m,m,m, 1.0d0,wsp(iget),m, wsp(iget),m, + . 0.0d0,wsp(iput),m ) + iodd = 1-iodd + enddo + 200 continue + iexph = iput + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine ZGPADM(ideg,m,t,H,ldh,wsp,lwsp,ipiv,iexph,ns,iflag) + + implicit none + double precision t + integer ideg, m, ldh, lwsp, iexph, ns, iflag, ipiv(m) + complex*16 H(ldh,m), wsp(lwsp) + +*-----Purpose----------------------------------------------------------| +* +* Computes exp(t*H), the matrix exponential of a general complex +* matrix in full, using the irreducible rational Pade approximation +* to the exponential exp(z) = r(z) = (+/-)( I + 2*(q(z)/p(z)) ), +* combined with scaling-and-squaring. +* +*-----Arguments--------------------------------------------------------| +* +* ideg : (input) the degre of the diagonal Pade to be used. +* a value of 6 is generally satisfactory. +* +* m : (input) order of H. +* +* H(ldh,m) : (input) argument matrix. +* +* t : (input) time-scale (can be < 0). +* +* wsp(lwsp) : (workspace/output) lwsp .ge. 4*m*m+ideg+1. +* +* ipiv(m) : (workspace) +* +*>>>> iexph : (output) number such that wsp(iexph) points to exp(tH) +* i.e., exp(tH) is located at wsp(iexph ... iexph+m*m-1) +* ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ +* NOTE: if the routine was called with wsp(iptr), +* then exp(tH) will start at wsp(iptr+iexph-1). +* +* ns : (output) number of scaling-squaring used. +* +* iflag : (output) exit flag. +* 0 - no problem +* <0 - problem +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + integer i,j,k,icoef,mm,ih2,iodd,iused,ifree,iq,ip,iput,iget + double precision hnorm + complex*16 cp, cq, scale, scale2, ZERO, ONE + + parameter( ZERO=(0.0d0,0.0d0), ONE=(1.0d0,0.0d0) ) + intrinsic ABS, CMPLX, DBLE, INT, LOG, MAX + +*--- check restrictions on input parameters ... + mm = m*m + iflag = 0 + if ( ldh.lt.m ) iflag = -1 + if ( lwsp.lt.4*mm+ideg+1 ) iflag = -2 + if ( iflag.ne.0 ) stop 'bad sizes (in input of ZGPADM)' +* +*--- initialise pointers ... +* + icoef = 1 + ih2 = icoef + (ideg+1) + ip = ih2 + mm + iq = ip + mm + ifree = iq + mm +* +*--- scaling: seek ns such that ||t*H/2^ns|| < 1/2; +* and set scale = t/2^ns ... +* + do i = 1,m + wsp(i) = ZERO + enddo + do j = 1,m + do i = 1,m + wsp(i) = wsp(i) + ABS( H(i,j) ) + enddo + enddo + hnorm = 0.0d0 + do i = 1,m + hnorm = MAX( hnorm,DBLE(wsp(i)) ) + enddo + hnorm = ABS( t*hnorm ) + if ( hnorm.eq.0.0d0 ) stop 'Error - null H in input of ZGPADM.' + ns = MAX( 0,INT(LOG(hnorm)/LOG(2.0d0))+2 ) + scale = CMPLX( t/DBLE(2**ns),0.0d0 ) + scale2 = scale*scale +* +*--- compute Pade coefficients ... +* + i = ideg+1 + j = 2*ideg+1 + wsp(icoef) = ONE + do k = 1,ideg + wsp(icoef+k) = (wsp(icoef+k-1)*DBLE( i-k ))/DBLE( k*(j-k) ) + enddo +* +*--- H2 = scale2*H*H ... +* + call ZGEMM( 'n','n',m,m,m,scale2,H,ldh,H,ldh,ZERO,wsp(ih2),m ) +* +*--- initialise p (numerator) and q (denominator) ... +* + cp = wsp(icoef+ideg-1) + cq = wsp(icoef+ideg) + do j = 1,m + do i = 1,m + wsp(ip + (j-1)*m + i-1) = ZERO + wsp(iq + (j-1)*m + i-1) = ZERO + enddo + wsp(ip + (j-1)*(m+1)) = cp + wsp(iq + (j-1)*(m+1)) = cq + enddo +* +*--- Apply Horner rule ... +* + iodd = 1 + k = ideg - 1 + 100 continue + iused = iodd*iq + (1-iodd)*ip + call ZGEMM( 'n','n',m,m,m, ONE,wsp(iused),m, + . wsp(ih2),m, ZERO,wsp(ifree),m ) + do j = 1,m + wsp(ifree+(j-1)*(m+1)) = wsp(ifree+(j-1)*(m+1))+wsp(icoef+k-1) + enddo + ip = (1-iodd)*ifree + iodd*ip + iq = iodd*ifree + (1-iodd)*iq + ifree = iused + iodd = 1-iodd + k = k-1 + if ( k.gt.0 ) goto 100 +* +*--- Obtain (+/-)(I + 2*(p\q)) ... +* + if ( iodd.ne.0 ) then + call ZGEMM( 'n','n',m,m,m, scale,wsp(iq),m, + . H,ldh, ZERO,wsp(ifree),m ) + iq = ifree + else + call ZGEMM( 'n','n',m,m,m, scale,wsp(ip),m, + . H,ldh, ZERO,wsp(ifree),m ) + ip = ifree + endif + call ZAXPY( mm, -ONE,wsp(ip),1, wsp(iq),1 ) + call ZGESV( m,m, wsp(iq),m, ipiv, wsp(ip),m, iflag ) + if ( iflag.ne.0 ) stop 'Problem in ZGESV (within ZGPADM)' + call ZDSCAL( mm, 2.0d0, wsp(ip), 1 ) + do j = 1,m + wsp(ip+(j-1)*(m+1)) = wsp(ip+(j-1)*(m+1)) + ONE + enddo + iput = ip + if ( ns.eq.0 .and. iodd.ne.0 ) then + call ZDSCAL( mm, -1.0d0, wsp(ip), 1 ) + goto 200 + endif +* +*-- squaring : exp(t*H) = (exp(t*H))^(2^ns) ... +* + iodd = 1 + do k = 1,ns + iget = iodd*ip + (1-iodd)*iq + iput = (1-iodd)*ip + iodd*iq + call ZGEMM( 'n','n',m,m,m, ONE,wsp(iget),m, wsp(iget),m, + . ZERO,wsp(iput),m ) + iodd = 1-iodd + enddo + 200 continue + iexph = iput + END +*----------------------------------------------------------------------| + subroutine ZHPADM(ideg,m,t,H,ldh,wsp,lwsp,ipiv,iexph,ns,iflag) + + implicit none + double precision t + integer ideg, m, ldh, lwsp, iexph, ns, iflag, ipiv(m) + complex*16 H(ldh,m), wsp(lwsp) + +*-----Purpose----------------------------------------------------------| +* +* Computes exp(t*H), the matrix exponential of an Hermitian matrix +* in full, using the irreducible rational Pade approximation to the +* exponential function exp(z) = r(z) = (+/-)( I + 2*(q(z)/p(z)) ), +* combined with scaling-and-squaring. +* +*-----Arguments--------------------------------------------------------| +* +* ideg : (input) the degre of the diagonal Pade to be used. +* a value of 6 is generally satisfactory. +* +* m : (input) order of H. +* +* H(ldh,m) : (input) argument matrix (both lower and upper parts). +* +* t : (input) time-scale (can be < 0). +* +* wsp(lwsp) : (workspace/output) lwsp .ge. 4*m*m+ideg+1. +* +* ipiv(m) : (workspace) +* +*>>>> iexph : (output) number such that wsp(iexph) points to exp(tH) +* i.e., exp(tH) is located at wsp(iexph ... iexph+m*m-1) +* ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ +* NOTE: if the routine was called with wsp(iptr), +* then exp(tH) will start at wsp(iptr+iexph-1). +* +* ns : (output) number of scaling-squaring used. +* +* iflag : (output) exit flag. +* 0 - no problem +* <0 - problem +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + integer i,j,k,icoef,mm,ih2,iodd,iused,ifree,iq,ip,iput,iget + double precision hnorm + complex*16 cp, cq, scale, scale2, ZERO, ONE + + parameter( ZERO=(0.0d0,0.0d0), ONE=(1.0d0,0.0d0) ) + intrinsic ABS, CMPLX, DBLE, INT, LOG, MAX + +*--- check restrictions on input parameters ... + mm = m*m + iflag = 0 + if ( ldh.lt.m ) iflag = -1 + if ( lwsp.lt.4*mm+ideg+1 ) iflag = -2 + if ( iflag.ne.0 ) stop 'bad sizes (in input of ZHPADM)' +* +*--- initialise pointers ... +* + icoef = 1 + ih2 = icoef + (ideg+1) + ip = ih2 + mm + iq = ip + mm + ifree = iq + mm +* +*--- scaling: seek ns such that ||t*H/2^ns|| < 1/2; +* and set scale = t/2^ns ... +* + do i = 1,m + wsp(i) = ZERO + enddo + do j = 1,m + do i = 1,m + wsp(i) = wsp(i) + ABS( H(i,j) ) + enddo + enddo + hnorm = 0.0d0 + do i = 1,m + hnorm = MAX( hnorm,DBLE(wsp(i)) ) + enddo + hnorm = ABS( t*hnorm ) + if ( hnorm.eq.0.0d0 ) stop 'Error - null H in input of ZHPADM.' + ns = MAX( 0,INT(LOG(hnorm)/LOG(2.0d0))+2 ) + scale = CMPLX( t/DBLE(2**ns),0.0d0 ) + scale2 = scale*scale +* +*--- compute Pade coefficients ... +* + i = ideg+1 + j = 2*ideg+1 + wsp(icoef) = ONE + do k = 1,ideg + wsp(icoef+k) = (wsp(icoef+k-1)*DBLE( i-k ))/DBLE( k*(j-k) ) + enddo +* +*--- H2 = scale2*H*H ... +* + call ZGEMM( 'n','n',m,m,m,scale2,H,ldh,H,ldh,ZERO,wsp(ih2),m ) +* +*--- initialise p (numerator) and q (denominator) ... +* + cp = wsp(icoef+ideg-1) + cq = wsp(icoef+ideg) + do j = 1,m + do i = 1,m + wsp(ip + (j-1)*m + i-1) = ZERO + wsp(iq + (j-1)*m + i-1) = ZERO + enddo + wsp(ip + (j-1)*(m+1)) = cp + wsp(iq + (j-1)*(m+1)) = cq + enddo +* +*--- Apply Horner rule ... +* + iodd = 1 + k = ideg - 1 + 100 continue + iused = iodd*iq + (1-iodd)*ip + call ZGEMM( 'n','n',m,m,m, ONE,wsp(iused),m, + . wsp(ih2),m, ZERO,wsp(ifree),m ) + do j = 1,m + wsp(ifree+(j-1)*(m+1)) = wsp(ifree+(j-1)*(m+1))+wsp(icoef+k-1) + enddo + ip = (1-iodd)*ifree + iodd*ip + iq = iodd*ifree + (1-iodd)*iq + ifree = iused + iodd = 1-iodd + k = k-1 + if ( k.gt.0 ) goto 100 +* +*--- Obtain (+/-)(I + 2*(p\q)) ... +* + if ( iodd.ne.0 ) then + call ZGEMM( 'n','n',m,m,m, scale,wsp(iq),m, + . H,ldh, ZERO,wsp(ifree),m ) + iq = ifree + else + call ZGEMM( 'n','n',m,m,m, scale,wsp(ip),m, + . H,ldh, ZERO,wsp(ifree),m ) + ip = ifree + endif + call ZAXPY( mm, -ONE,wsp(ip),1, wsp(iq),1 ) + call ZHESV( 'U',m,m,wsp(iq),m,ipiv,wsp(ip),m,wsp(ih2),mm,iflag ) + if ( iflag.ne.0 ) stop 'Problem in ZHESV (within ZHPADM)' + call ZDSCAL( mm, 2.0d0, wsp(ip), 1 ) + do j = 1,m + wsp(ip+(j-1)*(m+1)) = wsp(ip+(j-1)*(m+1)) + ONE + enddo + iput = ip + if ( ns.eq.0 .and. iodd.ne.0 ) then + call ZDSCAL( mm, -1.0d0, wsp(ip), 1 ) + goto 200 + endif +* +*-- squaring : exp(t*H) = (exp(t*H))^(2^ns) ... +* + iodd = 1 + do k = 1,ns + iget = iodd*ip + (1-iodd)*iq + iput = (1-iodd)*ip + iodd*iq + call ZGEMM( 'n','n',m,m,m, ONE,wsp(iget),m, wsp(iget),m, + . ZERO,wsp(iput),m ) + iodd = 1-iodd + enddo + 200 continue + iexph = iput + END +*----------------------------------------------------------------------| + subroutine DGCHBV( m, t, H,ldh, y, wsp, iwsp, iflag ) + + implicit none + integer m, ldh, iflag, iwsp(m) + double precision t, H(ldh,m), y(m) + complex*16 wsp(m*(m+2)) + +*-----Purpose----------------------------------------------------------| +* +*--- DGCHBV computes y = exp(t*H)*y using the partial fraction +* expansion of the uniform rational Chebyshev approximation +* to exp(-x) of type (14,14). H is a General matrix. +* About 14-digit accuracy is expected if the matrix H is negative +* definite. The algorithm may behave poorly otherwise. +* +*-----Arguments--------------------------------------------------------| +* +* m : (input) order of the matrix H +* +* t : (input) time-scaling factor (can be < 0). +* +* H(ldh,m): (input) argument matrix. +* +* y(m) : (input/output) on input the operand vector, +* on output the resulting vector exp(t*H)*y. +* +* iwsp(m) : (workspace) +* +* wsp : (workspace). Observe that a double precision vector of +* length 2*m*(m+2) can be used as well when calling this +* routine (thus avoiding an idle complex array elsewhere) +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + integer ndeg, i, j, ip, ih, iy, iz + parameter ( ndeg=7 ) + double precision alpha0 + complex*16 alpha(ndeg), theta(ndeg) + + intrinsic DBLE + +*--- Pointers ... + + ih = 1 + iy = ih + m*m + iz = iy + m + +*--- Coefficients and poles of the partial fraction expansion ... + + alpha0 = 0.183216998528140087D-11 + alpha(1)=( 0.557503973136501826D+02,-0.204295038779771857D+03) + alpha(2)=(-0.938666838877006739D+02, 0.912874896775456363D+02) + alpha(3)=( 0.469965415550370835D+02,-0.116167609985818103D+02) + alpha(4)=(-0.961424200626061065D+01,-0.264195613880262669D+01) + alpha(5)=( 0.752722063978321642D+00, 0.670367365566377770D+00) + alpha(6)=(-0.188781253158648576D-01,-0.343696176445802414D-01) + alpha(7)=( 0.143086431411801849D-03, 0.287221133228814096D-03) + + theta(1)=(-0.562314417475317895D+01, 0.119406921611247440D+01) + theta(2)=(-0.508934679728216110D+01, 0.358882439228376881D+01) + theta(3)=(-0.399337136365302569D+01, 0.600483209099604664D+01) + theta(4)=(-0.226978543095856366D+01, 0.846173881758693369D+01) + theta(5)=( 0.208756929753827868D+00, 0.109912615662209418D+02) + theta(6)=( 0.370327340957595652D+01, 0.136563731924991884D+02) + theta(7)=( 0.889777151877331107D+01, 0.166309842834712071D+02) +* +*--- Accumulation of the contribution of each pole ... +* + do j = 1,m + wsp(iz+j-1) = y(j) + y(j) = y(j)*alpha0 + enddo + do ip = 1,ndeg +*--- Solve each fraction using Gaussian elimination with pivoting... + do j = 1,m + do i = 1,m + wsp(ih+(j-1)*m+i-1) = -t*H(i,j) + enddo + wsp(ih+(j-1)*m+j-1) = wsp(ih+(j-1)*m+j-1)-theta(ip) + wsp(iy+j-1) = wsp(iz+j-1) + enddo + call ZGESV( M, 1, WSP(iH),M, IWSP, WSP(iY),M, IFLAG ) + if ( IFLAG.ne.0 ) stop 'Error in DGCHBV' +*--- Accumulate the partial result in y ... + do j = 1,m + y(j) = y(j) + DBLE( alpha(ip)*wsp(iy+j-1) ) + enddo + enddo + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine DSCHBV( m, t, H,ldh, y, wsp, iwsp, iflag ) + + implicit none + integer m, ldh, iflag, iwsp(m) + double precision t, H(ldh,m), y(m) + complex*16 wsp(m*(m+2)) + +*-----Purpose----------------------------------------------------------| +* +*--- DSCHBV computes y = exp(t*H)*y using the partial fraction +* expansion of the uniform rational Chebyshev approximation +* to exp(-x) of type (14,14). H is assumed to be symmetric. +* About 14-digit accuracy is expected if the matrix H is negative +* definite. The algorithm may behave poorly otherwise. +* +*-----Arguments--------------------------------------------------------| +* +* m : (input) order of matrix H +* +* t : (input) time-scaling factor (can be < 0). +* +* H(ldh,m): (input) symmetric matrix. +* +* y(m) : (input/output) on input the operand vector, +* on output the resulting vector exp(t*H)*y. +* +* iwsp(m) : (workspace) +* +* wsp : (workspace). Observe that a double precision vector of +* length 2*m*(m+2) can be used as well when calling this +* routine (thus avoiding an idle complex array elsewhere) +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + integer ndeg, i, j, ip, ih, iy, iz + parameter ( ndeg=7 ) + double precision alpha0 + complex*16 alpha(ndeg), theta(ndeg), w + + intrinsic ABS,CMPLX,DBLE,MIN + +*--- Pointers ... + + ih = 1 + iy = ih + m*m + iz = iy + m + +*--- Coefficients and poles of the partial fraction expansion ... + + alpha0 = 0.183216998528140087D-11 + alpha(1)=( 0.557503973136501826D+02,-0.204295038779771857D+03) + alpha(2)=(-0.938666838877006739D+02, 0.912874896775456363D+02) + alpha(3)=( 0.469965415550370835D+02,-0.116167609985818103D+02) + alpha(4)=(-0.961424200626061065D+01,-0.264195613880262669D+01) + alpha(5)=( 0.752722063978321642D+00, 0.670367365566377770D+00) + alpha(6)=(-0.188781253158648576D-01,-0.343696176445802414D-01) + alpha(7)=( 0.143086431411801849D-03, 0.287221133228814096D-03) + + theta(1)=(-0.562314417475317895D+01, 0.119406921611247440D+01) + theta(2)=(-0.508934679728216110D+01, 0.358882439228376881D+01) + theta(3)=(-0.399337136365302569D+01, 0.600483209099604664D+01) + theta(4)=(-0.226978543095856366D+01, 0.846173881758693369D+01) + theta(5)=( 0.208756929753827868D+00, 0.109912615662209418D+02) + theta(6)=( 0.370327340957595652D+01, 0.136563731924991884D+02) + theta(7)=( 0.889777151877331107D+01, 0.166309842834712071D+02) +* +*--- Accumulation of the contribution of each pole ... +* + do j = 1,m + wsp(iz+j-1) = y(j) + y(j) = y(j)*alpha0 + enddo + do ip = 1,ndeg +*--- Solve each fraction using Gaussian elimination with pivoting... + do j = 1,m + do i = 1,m + wsp(ih+(j-1)*m+i-1) = -t*H(i,j) + enddo + wsp(ih+(j-1)*m+j-1) = wsp(ih+(j-1)*m+j-1)-theta(ip) + wsp(iy+j-1) = wsp(iz+j-1) + enddo + call ZSYSV('U', M, 1, WSP(iH),M, IWSP, WSP(iY),M, W,1, IFLAG ) + if ( IFLAG.ne.0 ) stop 'Error in DSCHBV' +*--- Accumulate the partial result in y ... + do i = 1,m + y(i) = y(i) + DBLE( alpha(ip)*wsp(iy+i-1) ) + enddo + enddo + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine ZGCHBV( m, t, H,ldh, y, wsp, iwsp, iflag ) + + implicit none + integer m, ldh, iflag, iwsp(m) + double precision t + complex*16 H(ldh,m), y(m), wsp(m*(m+2)) + +*-----Purpose----------------------------------------------------------| +* +*--- ZGCHBV computes y = exp(t*H)*y using the partial fraction +* expansion of the uniform rational Chebyshev approximation +* to exp(-x) of type (14,14). H is a General matrix. +* About 14-digit accuracy is expected if the matrix H is negative +* definite. The algorithm may behave poorly otherwise. +* +*-----Arguments--------------------------------------------------------| +* +* m : (input) order of the matrix H. +* +* t : (input) time-scaling factor (can be < 0). +* +* H(ldh,m): (input) argument matrix. +* +* y(m) : (input/output) on input the operand vector, +* on output the resulting vector exp(t*H)*y. +* +* iwsp(m) : (workspace) +* +* wsp : (workspace). Observe that a double precision vector of +* length 2*m*(m+2) can be used as well when calling this +* routine. +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + integer ndeg, i, j, ip, ih, iy, iz + parameter ( ndeg=7 ) + double precision alpha0 + complex*16 alpha(2*ndeg), theta(2*ndeg) + +*--- Pointers ... + + ih = 1 + iy = ih + m*m + iz = iy + m + +*--- Coefficients and poles of the partial fraction expansion ... + + alpha0 = 0.183216998528140087D-11 + alpha(1)=( 0.557503973136501826D+02,-0.204295038779771857D+03) + alpha(2)=(-0.938666838877006739D+02, 0.912874896775456363D+02) + alpha(3)=( 0.469965415550370835D+02,-0.116167609985818103D+02) + alpha(4)=(-0.961424200626061065D+01,-0.264195613880262669D+01) + alpha(5)=( 0.752722063978321642D+00, 0.670367365566377770D+00) + alpha(6)=(-0.188781253158648576D-01,-0.343696176445802414D-01) + alpha(7)=( 0.143086431411801849D-03, 0.287221133228814096D-03) + + theta(1)=(-0.562314417475317895D+01, 0.119406921611247440D+01) + theta(2)=(-0.508934679728216110D+01, 0.358882439228376881D+01) + theta(3)=(-0.399337136365302569D+01, 0.600483209099604664D+01) + theta(4)=(-0.226978543095856366D+01, 0.846173881758693369D+01) + theta(5)=( 0.208756929753827868D+00, 0.109912615662209418D+02) + theta(6)=( 0.370327340957595652D+01, 0.136563731924991884D+02) + theta(7)=( 0.889777151877331107D+01, 0.166309842834712071D+02) +* + do ip = 1,ndeg + theta(ndeg+ip) = CONJG( theta(ip) ) + alpha(ndeg+ip) = CONJG( alpha(ip) ) + enddo +* +*--- Accumulation of the contribution of each pole ... +* + do j = 1,m + wsp(iz+j-1) = y(j) + y(j) = y(j)*alpha0 + enddo + do ip = 1,2*ndeg + alpha(ip) = 0.5d0*alpha(ip) +*--- Solve each fraction using Gaussian elimination with pivoting... + do j = 1,m + do i = 1,m + wsp(ih+(j-1)*m+i-1) = -t*H(i,j) + enddo + wsp(ih+(j-1)*m+j-1) = wsp(ih+(j-1)*m+j-1)-theta(ip) + wsp(iy+j-1) = wsp(iz+j-1) + enddo + call ZGESV( M, 1, WSP(iH),M, IWSP, WSP(iY),M, IFLAG ) + if ( IFLAG.ne.0 ) stop 'Error in ZGCHBV' +*--- Accumulate the partial result in y ... + do i = 1,m + y(i) = y(i) + alpha(ip)*wsp(iy+i-1) + enddo + enddo + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine DNCHBV( m, t, H,ldh, y, wsp ) + + implicit none + integer m, ldh + double precision t, H(ldh,m), y(m) + complex*16 wsp(m*(m+2)) + +*-----Purpose----------------------------------------------------------| +* +*--- DNCHBV computes y = exp(t*H)*y using the partial fraction +* expansion of the uniform rational Chebyshev approximation +* to exp(-x) of type (14,14). H is assumed to be upper-Hessenberg. +* About 14-digit accuracy is expected if the matrix H is negative +* definite. The algorithm may behave poorly otherwise. +* +*-----Arguments--------------------------------------------------------| +* +* m : (input) order of the Hessenberg matrix H +* +* t : (input) time-scaling factor (can be < 0). +* +* H(ldh,m): (input) upper Hessenberg matrix. +* +* y(m) : (input/output) on input the operand vector, +* on output the resulting vector exp(t*H)*y. +* +* wsp : (workspace). Observe that a double precision vector of +* length 2*m*(m+2) can be used as well when calling this +* routine (thus avoiding an idle complex array elsewhere) +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + complex*16 ZERO + integer ndeg, i, j, k, ip, ih, iy, iz + parameter ( ndeg=7, ZERO=(0.0d0,0.0d0) ) + double precision alpha0 + complex*16 alpha(ndeg), theta(ndeg), tmpc + + intrinsic ABS,DBLE,MIN + +*--- Pointers ... + + ih = 1 + iy = ih + m*m + iz = iy + m + +*--- Coefficients and poles of the partial fraction expansion... + + alpha0 = 0.183216998528140087D-11 + alpha(1)=( 0.557503973136501826D+02,-0.204295038779771857D+03) + alpha(2)=(-0.938666838877006739D+02, 0.912874896775456363D+02) + alpha(3)=( 0.469965415550370835D+02,-0.116167609985818103D+02) + alpha(4)=(-0.961424200626061065D+01,-0.264195613880262669D+01) + alpha(5)=( 0.752722063978321642D+00, 0.670367365566377770D+00) + alpha(6)=(-0.188781253158648576D-01,-0.343696176445802414D-01) + alpha(7)=( 0.143086431411801849D-03, 0.287221133228814096D-03) + + theta(1)=(-0.562314417475317895D+01, 0.119406921611247440D+01) + theta(2)=(-0.508934679728216110D+01, 0.358882439228376881D+01) + theta(3)=(-0.399337136365302569D+01, 0.600483209099604664D+01) + theta(4)=(-0.226978543095856366D+01, 0.846173881758693369D+01) + theta(5)=( 0.208756929753827868D+00, 0.109912615662209418D+02) + theta(6)=( 0.370327340957595652D+01, 0.136563731924991884D+02) + theta(7)=( 0.889777151877331107D+01, 0.166309842834712071D+02) +* +*--- Accumulation of the contribution of each pole ... +* + do j = 1,m + wsp(iz+j-1) = y(j) + y(j) = y(j)*alpha0 + enddo + do ip = 1,ndeg +*--- Solve each fraction using Gaussian elimination with pivoting... + do j = 1,m + wsp(iy+j-1) = wsp(iz+j-1) + do i = 1,MIN( j+1,m ) + wsp(ih+(j-1)*m+i-1) = -t*H(i,j) + enddo + wsp(ih+(j-1)*m+j-1) = wsp(ih+(j-1)*m+j-1)-theta(ip) + do k = i,m + wsp(ih+(j-1)*m+k-1) = ZERO + enddo + enddo + do i = 1,m-1 +*--- Get pivot and exchange rows ... + if (ABS(wsp(ih+(i-1)*m+i-1)).lt.ABS(wsp(ih+(i-1)*m+i))) then + call ZSWAP( m-i+1, wsp(ih+(i-1)*m+i-1),m, + . wsp(ih+(i-1)*m+i),m ) + call ZSWAP( 1, wsp(iy+i-1),1, wsp(iy+i),1 ) + endif +*--- Forward eliminiation ... + tmpc = wsp(ih+(i-1)*m+i) / wsp(ih+(i-1)*m+i-1) + call ZAXPY( m-i, -tmpc, wsp(ih+i*m+i-1),m, wsp(ih+i*m+i),m ) + wsp(iy+i) = wsp(iy+i) - tmpc*wsp(iy+i-1) + enddo +*--- Backward substitution ... + do i = m,1,-1 + tmpc = wsp(iy+i-1) + do j = i+1,m + tmpc = tmpc - wsp(ih+(j-1)*m+i-1)*wsp(iy+j-1) + enddo + wsp(iy+i-1) = tmpc / wsp(ih+(i-1)*m+i-1) + enddo +*--- Accumulate the partial result in y ... + do j = 1,m + y(j) = y(j) + DBLE( alpha(ip)*wsp(iy+j-1) ) + enddo + enddo + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine ZNCHBV( m, t, H,ldh, y, wsp ) + + implicit none + integer m, ldh + double precision t + complex*16 H(ldh,m), y(m), wsp(m*(m+2)) + +*-----Purpose----------------------------------------------------------| +* +*--- ZNCHBV computes y = exp(t*H)*y using the partial fraction +* expansion of the uniform rational Chebyshev approximation +* to exp(-x) of type (14,14). H is assumed to be upper-Hessenberg. +* About 14-digit accuracy is expected if the matrix H is negative +* definite. The algorithm may behave poorly otherwise. +* +*-----Arguments--------------------------------------------------------| +* +* m : (input) order of the Hessenberg matrix H +* +* t : (input) time-scaling factor (can be < 0). +* +* H(ldh,m): (input) upper Hessenberg matrix. +* +* y(m) : (input/output) on input the operand vector, +* on output the resulting vector exp(t*H)*y. +* +* wsp : (workspace). Observe that a double precision vector of +* length 2*m*(m+2) can be used as well when calling this +* routine. +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + complex*16 ZERO + integer ndeg, i, j, k, ip, ih, iy, iz + parameter ( ndeg=7, ZERO=(0.0d0,0.0d0) ) + double precision alpha0 + complex*16 alpha(ndeg), theta(ndeg), tmpc + + intrinsic ABS,DBLE,CONJG,MIN + +*--- Pointers ... + + ih = 1 + iy = ih + m*m + iz = iy + m + +*--- Coefficients and poles of the partial fraction expansion... + + alpha0 = 0.183216998528140087D-11 + alpha(1)=( 0.557503973136501826D+02,-0.204295038779771857D+03) + alpha(2)=(-0.938666838877006739D+02, 0.912874896775456363D+02) + alpha(3)=( 0.469965415550370835D+02,-0.116167609985818103D+02) + alpha(4)=(-0.961424200626061065D+01,-0.264195613880262669D+01) + alpha(5)=( 0.752722063978321642D+00, 0.670367365566377770D+00) + alpha(6)=(-0.188781253158648576D-01,-0.343696176445802414D-01) + alpha(7)=( 0.143086431411801849D-03, 0.287221133228814096D-03) + + theta(1)=(-0.562314417475317895D+01, 0.119406921611247440D+01) + theta(2)=(-0.508934679728216110D+01, 0.358882439228376881D+01) + theta(3)=(-0.399337136365302569D+01, 0.600483209099604664D+01) + theta(4)=(-0.226978543095856366D+01, 0.846173881758693369D+01) + theta(5)=( 0.208756929753827868D+00, 0.109912615662209418D+02) + theta(6)=( 0.370327340957595652D+01, 0.136563731924991884D+02) + theta(7)=( 0.889777151877331107D+01, 0.166309842834712071D+02) +* + do ip = 1,ndeg + theta(ndeg+ip) = CONJG( theta(ip) ) + alpha(ndeg+ip) = CONJG( alpha(ip) ) + enddo +* +*--- Accumulation of the contribution of each pole ... +* + do j = 1,m + wsp(iz+j-1) = y(j) + y(j) = y(j)*alpha0 + enddo + do ip = 1,2*ndeg + alpha(ip) = 0.5d0*alpha(ip) +*--- Solve each fraction using Gaussian elimination with pivoting... + do j = 1,m + wsp(iy+j-1) = wsp(iz+j-1) + do i = 1,MIN( j+1,m ) + wsp(ih+(j-1)*m+i-1) = -t*H(i,j) + enddo + wsp(ih+(j-1)*m+j-1) = wsp(ih+(j-1)*m+j-1)-theta(ip) + do k = i,m + wsp(ih+(j-1)*m+k-1) = ZERO + enddo + enddo + do i = 1,m-1 +*--- Get pivot and exchange rows ... + if (ABS(wsp(ih+(i-1)*m+i-1)).lt.ABS(wsp(ih+(i-1)*m+i))) then + call ZSWAP( m-i+1, wsp(ih+(i-1)*m+i-1),m, + . wsp(ih+(i-1)*m+i),m ) + call ZSWAP( 1, wsp(iy+i-1),1, wsp(iy+i),1 ) + endif +*--- Forward eliminiation ... + tmpc = wsp(ih+(i-1)*m+i) / wsp(ih+(i-1)*m+i-1) + call ZAXPY( m-i, -tmpc, wsp(ih+i*m+i-1),m, wsp(ih+i*m+i),m ) + wsp(iy+i) = wsp(iy+i) - tmpc*wsp(iy+i-1) + enddo +*--- Backward substitution ... + do i = m,1,-1 + tmpc = wsp(iy+i-1) + do j = i+1,m + tmpc = tmpc - wsp(ih+(j-1)*m+i-1)*wsp(iy+j-1) + enddo + wsp(iy+i-1) = tmpc / wsp(ih+(i-1)*m+i-1) + enddo +*--- Accumulate the partial result in y ... + do j = 1,m + y(j) = y(j) + alpha(ip)*wsp(iy+j-1) + enddo + enddo + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine DGEXPV( n, m, t, v, w, tol, anorm, + . wsp,lwsp, iwsp,liwsp, matvec, itrace,iflag ) + + implicit none + integer n, m, lwsp, liwsp, itrace, iflag, iwsp(liwsp) + double precision t, tol, anorm, v(n), w(n), wsp(lwsp) + external matvec + +*-----Purpose----------------------------------------------------------| +* +*--- DGEXPV computes w = exp(t*A)*v - for a General matrix A. +* +* It does not compute the matrix exponential in isolation but +* instead, it computes directly the action of the exponential +* operator on the operand vector. This way of doing so allows +* for addressing large sparse problems. +* +* The method used is based on Krylov subspace projection +* techniques and the matrix under consideration interacts only +* via the external routine `matvec' performing the matrix-vector +* product (matrix-free method). +* +*-----Arguments--------------------------------------------------------| +* +* n : (input) order of the principal matrix A. +* +* m : (input) maximum size for the Krylov basis. +* +* t : (input) time at wich the solution is needed (can be < 0). +* +* v(n) : (input) given operand vector. +* +* w(n) : (output) computed approximation of exp(t*A)*v. +* +* tol : (input/output) the requested accuracy tolerance on w. +* If on input tol=0.0d0 or tol is too small (tol.le.eps) +* the internal value sqrt(eps) is used, and tol is set to +* sqrt(eps) on output (`eps' denotes the machine epsilon). +* (`Happy breakdown' is assumed if h(j+1,j) .le. anorm*tol) +* +* anorm : (input) an approximation of some norm of A. +* +* wsp(lwsp): (workspace) lwsp .ge. n*(m+1)+n+(m+2)^2+4*(m+2)^2+ideg+1 +* +---------+-------+---------------+ +* (actually, ideg=6) V H wsp for PADE +* +* iwsp(liwsp): (workspace) liwsp .ge. m+2 +* +* matvec : external subroutine for matrix-vector multiplication. +* synopsis: matvec( x, y ) +* double precision x(*), y(*) +* computes: y(1:n) <- A*x(1:n) +* where A is the principal matrix. +* +* itrace : (input) running mode. 0=silent, 1=print step-by-step info +* +* iflag : (output) exit flag. +* <0 - bad input arguments +* 0 - no problem +* 1 - maximum number of steps reached without convergence +* 2 - requested tolerance was too high +* +*-----Accounts on the computation--------------------------------------| +* Upon exit, an interested user may retrieve accounts on the +* computations. They are located in wsp and iwsp as indicated below: +* +* location mnemonic description +* -----------------------------------------------------------------| +* iwsp(1) = nmult, number of matrix-vector multiplications used +* iwsp(2) = nexph, number of Hessenberg matrix exponential evaluated +* iwsp(3) = nscale, number of repeated squaring involved in Pade +* iwsp(4) = nstep, number of integration steps used up to completion +* iwsp(5) = nreject, number of rejected step-sizes +* iwsp(6) = ibrkflag, set to 1 if `happy breakdown' and 0 otherwise +* iwsp(7) = mbrkdwn, if `happy brkdown', basis-size when it occured +* -----------------------------------------------------------------| +* wsp(1) = step_min, minimum step-size used during integration +* wsp(2) = step_max, maximum step-size used during integration +* wsp(3) = dummy +* wsp(4) = dummy +* wsp(5) = x_error, maximum among all local truncation errors +* wsp(6) = s_error, global sum of local truncation errors +* wsp(7) = tbrkdwn, if `happy breakdown', time when it occured +* wsp(8) = t_now, integration domain successfully covered +* wsp(9) = hump, i.e., max||exp(sA)||, s in [0,t] (or [t,0] if t<0) +* wsp(10) = ||w||/||v||, scaled norm of the solution w. +* -----------------------------------------------------------------| +* The `hump' is a measure of the conditioning of the problem. The +* matrix exponential is well-conditioned if hump = 1, whereas it is +* poorly-conditioned if hump >> 1. However the solution can still be +* relatively fairly accurate even when the hump is large (the hump +* is an upper bound), especially when the hump and the scaled norm +* of w [this is also computed and returned in wsp(10)] are of the +* same order of magnitude (further details in reference below). +* +*----------------------------------------------------------------------| +*-----The following parameters may also be adjusted herein-------------| +* + integer mxstep, mxreject, ideg + double precision delta, gamma + parameter( mxstep = 1000, + . mxreject = 0, + . ideg = 6, + . delta = 1.2d0, + . gamma = 0.9d0 ) + +* mxstep : maximum allowable number of integration steps. +* The value 0 means an infinite number of steps. +* +* mxreject: maximum allowable number of rejections at each step. +* The value 0 means an infinite number of rejections. +* +* ideg : the Pade approximation of type (ideg,ideg) is used as +* an approximation to exp(H). The value 0 switches to the +* uniform rational Chebyshev approximation of type (14,14) +* +* delta : local truncation error `safety factor' +* +* gamma : stepsize `shrinking factor' +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + integer i, j, k1, mh, mx, iv, ih, j1v, ns, ifree, lfree, iexph, + . ireject,ibrkflag,mbrkdwn, nmult, nreject, nexph, nscale, + . nstep + double precision sgn, t_out, tbrkdwn, step_min,step_max, err_loc, + . s_error, x_error, t_now, t_new, t_step, t_old, + . xm, beta, break_tol, p1, p2, p3, eps, rndoff, + . vnorm, avnorm, hj1j, hij, hump, SQR1 + + intrinsic AINT,ABS,DBLE,LOG10,MAX,MIN,NINT,SIGN,SQRT + double precision DDOT, DNRM2 + +*--- check restrictions on input parameters ... + iflag = 0 + if ( lwsp.lt.n*(m+2)+5*(m+2)**2+ideg+1 ) iflag = -1 + if ( liwsp.lt.m+2 ) iflag = -2 + if ( m.ge.n .or. m.le.0 ) iflag = -3 + if ( iflag.ne.0 ) stop 'bad sizes (in input of DGEXPV)' +* +*--- initialisations ... +* + k1 = 2 + mh = m + 2 + iv = 1 + ih = iv + n*(m+1) + n + ifree = ih + mh*mh + lfree = lwsp - ifree + 1 + + ibrkflag = 0 + mbrkdwn = m + nmult = 0 + nreject = 0 + nexph = 0 + nscale = 0 + + t_out = ABS( t ) + tbrkdwn = 0.0d0 + step_min = t_out + step_max = 0.0d0 + nstep = 0 + s_error = 0.0d0 + x_error = 0.0d0 + t_now = 0.0d0 + t_new = 0.0d0 + + p1 = 4.0d0/3.0d0 + 1 p2 = p1 - 1.0d0 + p3 = p2 + p2 + p2 + eps = ABS( p3-1.0d0 ) + if ( eps.eq.0.0d0 ) go to 1 + if ( tol.le.eps ) tol = SQRT( eps ) + rndoff = eps*anorm + + break_tol = 1.0d-7 +*>>> break_tol = tol +*>>> break_tol = anorm*tol + + sgn = SIGN( 1.0d0,t ) + call DCOPY( n, v,1, w,1 ) + beta = DNRM2( n, w,1 ) + vnorm = beta + hump = beta +* +*--- obtain the very first stepsize ... +* + SQR1 = SQRT( 0.1d0 ) + xm = 1.0d0/DBLE( m ) + p1 = tol*(((m+1)/2.72D0)**(m+1))*SQRT(2.0D0*3.14D0*(m+1)) + t_new = (1.0d0/anorm)*(p1/(4.0d0*beta*anorm))**xm + p1 = 10.0d0**(NINT( LOG10( t_new )-SQR1 )-1) + t_new = AINT( t_new/p1 + 0.55d0 ) * p1 +* +*--- step-by-step integration ... +* + 100 if ( t_now.ge.t_out ) goto 500 + + nstep = nstep + 1 + t_step = MIN( t_out-t_now, t_new ) + + p1 = 1.0d0/beta + do i = 1,n + wsp(iv + i-1) = p1*w(i) + enddo + do i = 1,mh*mh + wsp(ih+i-1) = 0.0d0 + enddo +* +*--- Arnoldi loop ... +* + j1v = iv + n + do 200 j = 1,m + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + do i = 1,j + hij = DDOT( n, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + call DAXPY( n, -hij, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + wsp(ih+(j-1)*mh+i-1) = hij + enddo + hj1j = DNRM2( n, wsp(j1v),1 ) +*--- if `happy breakdown' go straightforward at the end ... + if ( hj1j.le.break_tol ) then + print*,'happy breakdown: mbrkdwn =',j,' h =',hj1j + k1 = 0 + ibrkflag = 1 + mbrkdwn = j + tbrkdwn = t_now + t_step = t_out-t_now + goto 300 + endif + wsp(ih+(j-1)*mh+j) = hj1j + call DSCAL( n, 1.0d0/hj1j, wsp(j1v),1 ) + j1v = j1v + n + 200 continue + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + avnorm = DNRM2( n, wsp(j1v),1 ) +* +*--- set 1 for the 2-corrected scheme ... +* + 300 continue + wsp(ih+m*mh+m+1) = 1.0d0 +* +*--- loop while ireject> 1. However the solution can still be +* relatively fairly accurate even when the hump is large (the hump +* is an upper bound), especially when the hump and the scaled norm +* of w [this is also computed and returned in wsp(10)] are of the +* same order of magnitude (further details in reference below). +* +*----------------------------------------------------------------------| +*-----The following parameters may also be adjusted herein-------------| +* + integer mxstep, mxreject, ideg + double precision delta, gamma + parameter( mxstep = 500, + . mxreject = 0, + . ideg = 6, + . delta = 1.2d0, + . gamma = 0.9d0 ) + +* mxstep : maximum allowable number of integration steps. +* The value 0 means an infinite number of steps. +* +* mxreject: maximum allowable number of rejections at each step. +* The value 0 means an infinite number of rejections. +* +* ideg : the Pade approximation of type (ideg,ideg) is used as +* an approximation to exp(H). The value 0 switches to the +* uniform rational Chebyshev approximation of type (14,14) +* +* delta : local truncation error `safety factor' +* +* gamma : stepsize `shrinking factor' +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + integer i, j, k1, mh, mx, iv, ih, j1v, ns, ifree, lfree, iexph, + . ireject,ibrkflag,mbrkdwn, nmult, nreject, nexph, nscale, + . nstep + double precision sgn, t_out, tbrkdwn, step_min,step_max, err_loc, + . s_error, x_error, t_now, t_new, t_step, t_old, + . xm, beta, break_tol, p1, p2, p3, eps, rndoff, + . vnorm, avnorm, hj1j, hjj, hump, SQR1 + + intrinsic AINT,ABS,DBLE,LOG10,MAX,MIN,NINT,SIGN,SQRT + double precision DDOT, DNRM2 + +*--- check restrictions on input parameters ... + iflag = 0 + if ( lwsp.lt.n*(m+2)+5*(m+2)**2+ideg+1 ) iflag = -1 + if ( liwsp.lt.m+2 ) iflag = -2 + if ( m.ge.n .or. m.le.0 ) iflag = -3 + if ( iflag.ne.0 ) stop 'bad sizes (in input of DSEXPV)' +* +*--- initialisations ... +* + k1 = 2 + mh = m + 2 + iv = 1 + ih = iv + n*(m+1) + n + ifree = ih + mh*mh + lfree = lwsp - ifree + 1 + + ibrkflag = 0 + mbrkdwn = m + nmult = 0 + nreject = 0 + nexph = 0 + nscale = 0 + + t_out = ABS( t ) + tbrkdwn = 0.0d0 + step_min = t_out + step_max = 0.0d0 + nstep = 0 + s_error = 0.0d0 + x_error = 0.0d0 + t_now = 0.0d0 + t_new = 0.0d0 + + p1 = 4.0d0/3.0d0 + 1 p2 = p1 - 1.0d0 + p3 = p2 + p2 + p2 + eps = ABS( p3-1.0d0 ) + if ( eps.eq.0.0d0 ) go to 1 + if ( tol.le.eps ) tol = SQRT( eps ) + rndoff = eps*anorm + + break_tol = 1.0d-7 +*>>> break_tol = tol +*>>> break_tol = anorm*tol + + sgn = SIGN( 1.0d0,t ) + call DCOPY( n, v,1, w,1 ) + beta = DNRM2( n, w,1 ) + vnorm = beta + hump = beta +* +*--- obtain the very first stepsize ... +* + SQR1 = SQRT( 0.1d0 ) + xm = 1.0d0/DBLE( m ) + p1 = tol*(((m+1)/2.72D0)**(m+1))*SQRT(2.0D0*3.14D0*(m+1)) + t_new = (1.0d0/anorm)*(p1/(4.0d0*beta*anorm))**xm + p1 = 10.0d0**(NINT( LOG10( t_new )-SQR1 )-1) + t_new = AINT( t_new/p1 + 0.55d0 ) * p1 +* +*--- step-by-step integration ... +* + 100 if ( t_now.ge.t_out ) goto 500 + + nstep = nstep + 1 + t_step = MIN( t_out-t_now, t_new ) + + p1 = 1.0d0/beta + do i = 1,n + wsp(iv + i-1) = p1*w(i) + enddo + do i = 1,mh*mh + wsp(ih+i-1) = 0.0d0 + enddo +* +*--- Lanczos loop ... +* + j1v = iv + n + do 200 j = 1,m + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + if ( j.gt.1 ) + . call DAXPY(n,-wsp(ih+(j-1)*mh+j-2),wsp(j1v-2*n),1,wsp(j1v),1) + hjj = DDOT( n, wsp(j1v-n),1, wsp(j1v),1 ) + call DAXPY( n, -hjj, wsp(j1v-n),1, wsp(j1v),1 ) + hj1j = DNRM2( n, wsp(j1v),1 ) + wsp(ih+(j-1)*(mh+1)) = hjj +*--- if `happy breakdown' go straightforward at the end ... + if ( hj1j.le.break_tol ) then + print*,'happy breakdown: mbrkdwn =',j,' h =',hj1j + k1 = 0 + ibrkflag = 1 + mbrkdwn = j + tbrkdwn = t_now + t_step = t_out-t_now + goto 300 + endif + wsp(ih+(j-1)*mh+j) = hj1j + wsp(ih+j*mh+j-1) = hj1j + call DSCAL( n, 1.0d0/hj1j, wsp(j1v),1 ) + j1v = j1v + n + 200 continue + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + avnorm = DNRM2( n, wsp(j1v),1 ) +* +*--- set 1 for the 2-corrected scheme ... +* + 300 continue + wsp(ih+m*mh+m-1) = 0.0d0 + wsp(ih+m*mh+m+1) = 1.0d0 +* +*--- loop while ireject> 1. However the solution can still be +* relatively fairly accurate even when the hump is large (the hump +* is an upper bound), especially when the hump and the scaled norm +* of w [this is also computed and returned in wsp(10)] are of the +* same order of magnitude (further details in reference below). +* +*----------------------------------------------------------------------| +*-----The following parameters may also be adjusted herein-------------| +* + integer mxstep, mxreject, ideg + double precision delta, gamma + parameter( mxstep = 500, + . mxreject = 0, + . ideg = 6, + . delta = 1.2d0, + . gamma = 0.9d0 ) + +* mxstep : maximum allowable number of integration steps. +* The value 0 means an infinite number of steps. +* +* mxreject: maximum allowable number of rejections at each step. +* The value 0 means an infinite number of rejections. +* +* ideg : the Pade approximation of type (ideg,ideg) is used as +* an approximation to exp(H). The value 0 switches to the +* uniform rational Chebyshev approximation of type (14,14) +* +* delta : local truncation error `safety factor' +* +* gamma : stepsize `shrinking factor' +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| + + complex*16 ZERO, ONE + parameter( ZERO=(0.0d0,0.0d0), ONE=(1.0d0,0.0d0) ) + integer i, j, k1, mh, mx, iv, ih, j1v, ns, ifree, lfree, iexph, + . ireject,ibrkflag,mbrkdwn, nmult, nreject, nexph, nscale, + . nstep + double precision sgn, t_out, tbrkdwn, step_min,step_max, err_loc, + . s_error, x_error, t_now, t_new, t_step, t_old, + . xm, beta, break_tol, p1, p2, p3, eps, rndoff, + . vnorm, avnorm, hj1j, hump, SQR1 + complex*16 hij + + intrinsic AINT,ABS,CMPLX,DBLE,INT,LOG10,MAX,MIN,NINT,SIGN,SQRT + complex*16 ZDOTC + double precision DZNRM2 +* +*--- check restrictions on input parameters ... +* + iflag = 0 + if ( lwsp.lt.n*(m+2)+5*(m+2)**2+ideg+1 ) iflag = -1 + if ( liwsp.lt.m+2 ) iflag = -2 + if ( m.ge.n .or. m.le.0 ) iflag = -3 + if ( iflag.ne.0 ) stop 'bad sizes (in input of ZGEXPV)' +* +*--- initialisations ... +* + k1 = 2 + mh = m + 2 + iv = 1 + ih = iv + n*(m+1) + n + ifree = ih + mh*mh + lfree = lwsp - ifree + 1 + + ibrkflag = 0 + mbrkdwn = m + nmult = 0 + nreject = 0 + nexph = 0 + nscale = 0 + + t_out = ABS( t ) + tbrkdwn = 0.0d0 + step_min = t_out + step_max = 0.0d0 + nstep = 0 + s_error = 0.0d0 + x_error = 0.0d0 + t_now = 0.0d0 + t_new = 0.0d0 + + p1 = 4.0d0/3.0d0 + 1 p2 = p1 - 1.0d0 + p3 = p2 + p2 + p2 + eps = ABS( p3-1.0d0 ) + if ( eps.eq.0.0d0 ) go to 1 + if ( tol.le.eps ) tol = SQRT( eps ) + rndoff = eps*anorm + + break_tol = 1.0d-7 +*>>> break_tol = tol +*>>> break_tol = anorm*tol + + sgn = SIGN( 1.0d0,t ) + call ZCOPY( n, v,1, w,1 ) + beta = DZNRM2( n, w,1 ) + vnorm = beta + hump = beta +* +*--- obtain the very first stepsize ... +* + SQR1 = SQRT( 0.1d0 ) + xm = 1.0d0/DBLE( m ) + p2 = tol*(((m+1)/2.72D0)**(m+1))*SQRT(2.0D0*3.14D0*(m+1)) + t_new = (1.0d0/anorm)*(p2/(4.0d0*beta*anorm))**xm + p1 = 10.0d0**(NINT( LOG10( t_new )-SQR1 )-1) + t_new = AINT( t_new/p1 + 0.55d0 ) * p1 +* +*--- step-by-step integration ... +* + 100 if ( t_now.ge.t_out ) goto 500 + + nstep = nstep + 1 + t_step = MIN( t_out-t_now, t_new ) + p1 = 1.0d0/beta + do i = 1,n + wsp(iv + i-1) = p1*w(i) + enddo + do i = 1,mh*mh + wsp(ih+i-1) = ZERO + enddo +* +*--- Arnoldi loop ... +* + j1v = iv + n + do 200 j = 1,m + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + do i = 1,j + hij = ZDOTC( n, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + call ZAXPY( n, -hij, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + wsp(ih+(j-1)*mh+i-1) = hij + enddo + hj1j = DZNRM2( n, wsp(j1v),1 ) +*--- if `happy breakdown' go straightforward at the end ... + if ( hj1j.le.break_tol ) then + print*,'happy breakdown: mbrkdwn =',j,' h =',hj1j + k1 = 0 + ibrkflag = 1 + mbrkdwn = j + tbrkdwn = t_now + t_step = t_out-t_now + goto 300 + endif + wsp(ih+(j-1)*mh+j) = CMPLX( hj1j ) + call ZDSCAL( n, 1.0d0/hj1j, wsp(j1v),1 ) + j1v = j1v + n + 200 continue + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + avnorm = DZNRM2( n, wsp(j1v),1 ) +* +*--- set 1 for the 2-corrected scheme ... +* + 300 continue + wsp(ih+m*mh+m+1) = ONE +* +*--- loop while ireject> 1. However the solution can still be +* relatively fairly accurate even when the hump is large (the hump +* is an upper bound), especially when the hump and the scaled norm +* of w [this is also computed and returned in wsp(10)] are of the +* same order of magnitude (further details in reference below). +* +*----------------------------------------------------------------------| +*-----The following parameters may also be adjusted herein-------------| +* + integer mxstep, mxreject, ideg + double precision delta, gamma + parameter( mxstep = 500, + . mxreject = 0, + . ideg = 6, + . delta = 1.2d0, + . gamma = 0.9d0 ) + +* mxstep : maximum allowable number of integration steps. +* The value 0 means an infinite number of steps. +* +* mxreject: maximum allowable number of rejections at each step. +* The value 0 means an infinite number of rejections. +* +* ideg : the Pade approximation of type (ideg,ideg) is used as +* an approximation to exp(H). The value 0 switches to the +* uniform rational Chebyshev approximation of type (14,14) +* +* delta : local truncation error `safety factor' +* +* gamma : stepsize `shrinking factor' +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + complex*16 ZERO, ONE + parameter( ZERO=(0.0d0,0.0d0), ONE=(1.0d0,0.0d0) ) + integer i, j, k1, mh, mx, iv, ih, j1v, ns, ifree, lfree, iexph, + . ireject,ibrkflag,mbrkdwn, nmult, nreject, nexph, nscale, + . nstep + double precision sgn, t_out, tbrkdwn, step_min,step_max, err_loc, + . s_error, x_error, t_now, t_new, t_step, t_old, + . xm, beta, break_tol, p1, p2, p3, eps, rndoff, + . vnorm, avnorm, hj1j, hump, SQR1 + complex*16 hjj + + intrinsic AINT,ABS,CMPLX,DBLE,INT,LOG10,MAX,MIN,NINT,SIGN,SQRT + complex*16 ZDOTC + double precision DZNRM2 +* +*--- check restrictions on input parameters ... +* + iflag = 0 + if ( lwsp.lt.n*(m+2)+5*(m+2)**2+ideg+1 ) iflag = -1 + if ( liwsp.lt.m+2 ) iflag = -2 + if ( m.ge.n .or. m.le.0 ) iflag = -3 + if ( iflag.ne.0 ) stop 'bad sizes (in input of DHEXPV)' +* +*--- initialisations ... +* + k1 = 2 + mh = m + 2 + iv = 1 + ih = iv + n*(m+1) + n + ifree = ih + mh*mh + lfree = lwsp - ifree + 1 + + ibrkflag = 0 + mbrkdwn = m + nmult = 0 + nreject = 0 + nexph = 0 + nscale = 0 + + t_out = ABS( t ) + tbrkdwn = 0.0d0 + step_min = t_out + step_max = 0.0d0 + nstep = 0 + s_error = 0.0d0 + x_error = 0.0d0 + t_now = 0.0d0 + t_new = 0.0d0 + + p1 = 4.0d0/3.0d0 + 1 p2 = p1 - 1.0d0 + p3 = p2 + p2 + p2 + eps = ABS( p3-1.0d0 ) + if ( eps.eq.0.0d0 ) go to 1 + if ( tol.le.eps ) tol = SQRT( eps ) + rndoff = eps*anorm + + break_tol = 1.0d-7 +*>>> break_tol = tol +*>>> break_tol = anorm*tol + + sgn = SIGN( 1.0d0,t ) + call ZCOPY( n, v,1, w,1 ) + beta = DZNRM2( n, w,1 ) + vnorm = beta + hump = beta +* +*--- obtain the very first stepsize ... +* + SQR1 = SQRT( 0.1d0 ) + xm = 1.0d0/DBLE( m ) + p2 = tol*(((m+1)/2.72D0)**(m+1))*SQRT(2.0D0*3.14D0*(m+1)) + t_new = (1.0d0/anorm)*(p2/(4.0d0*beta*anorm))**xm + p1 = 10.0d0**(NINT( LOG10( t_new )-SQR1 )-1) + t_new = AINT( t_new/p1 + 0.55d0 ) * p1 +* +*--- step-by-step integration ... +* + 100 if ( t_now.ge.t_out ) goto 500 + + nstep = nstep + 1 + t_step = MIN( t_out-t_now, t_new ) + beta = DZNRM2( n, w,1 ) + p1 = 1.0d0/beta + do i = 1,n + wsp(iv + i-1) = p1*w(i) + enddo + do i = 1,mh*mh + wsp(ih+i-1) = ZERO + enddo +* +*--- Lanczos loop ... +* + j1v = iv + n + do 200 j = 1,m + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + if ( j.gt.1 ) + . call ZAXPY(n,-wsp(ih+(j-1)*mh+j-2),wsp(j1v-2*n),1,wsp(j1v),1) + hjj = ZDOTC( n, wsp(j1v-n),1, wsp(j1v),1 ) + call ZAXPY( n, -hjj, wsp(j1v-n),1, wsp(j1v),1 ) + hj1j = DZNRM2( n, wsp(j1v),1 ) + wsp(ih+(j-1)*(mh+1)) = hjj +*--- if `happy breakdown' go straightforward at the end ... + if ( hj1j.le.break_tol ) then + print*,'happy breakdown: mbrkdwn =',j,' h =',hj1j + k1 = 0 + ibrkflag = 1 + mbrkdwn = j + tbrkdwn = t_now + t_step = t_out-t_now + goto 300 + endif + wsp(ih+(j-1)*mh+j) = CMPLX( hj1j ) + wsp(ih+j*mh+j-1) = CMPLX( hj1j ) + call ZDSCAL( n, 1.0d0/hj1j, wsp(j1v),1 ) + j1v = j1v + n + 200 continue + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + avnorm = DZNRM2( n, wsp(j1v),1 ) +* +*--- set 1 for the 2-corrected scheme ... +* + 300 continue + wsp(ih+m*mh+m-1) = ZERO + wsp(ih+m*mh+m+1) = ONE +* +*--- loop while ireject>> break_tol = tol +*>>> break_tol = anorm*tol + +* +*--- step-by-step integration ... +* + sgn = SIGN( 1.0d0,t ) + SQR1 = SQRT( 0.1d0 ) + call DCOPY( n, v,1, w,1 ) + + 100 if ( t_now.ge.t_out ) goto 500 + + nmult = nmult + 1 + call matvec( w, wsp(iv) ) + call DAXPY( n, 1.0d0, u,1, wsp(iv),1 ) + beta = DNRM2( n, wsp(iv),1 ) + if ( beta.eq.0.0d0 ) goto 500 + call DSCAL( n, 1.0d0/beta, wsp(iv),1 ) + do i = 1,mh*mh + wsp(ih+i-1) = 0.0d0 + enddo + + if ( nstep.eq.0 ) then +*--- obtain the very first stepsize ... + xm = 1.0d0/DBLE( m ) + p1 = tol*(((m+1)/2.72D0)**(m+1))*SQRT(2.0D0*3.14D0*(m+1)) + t_new = (1.0d0/anorm)*(p1/(4.0d0*beta*anorm))**xm + p1 = 10.0d0**(NINT( LOG10( t_new )-SQR1 )-1) + t_new = AINT( t_new/p1 + 0.55d0 ) * p1 + endif + nstep = nstep + 1 + t_step = MIN( t_out-t_now, t_new ) +* +*--- Arnoldi loop ... +* + j1v = iv + n + do 200 j = 1,m + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + do i = 1,j + hij = DDOT( n, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + call DAXPY( n, -hij, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + wsp(ih+(j-1)*mh+i-1) = hij + enddo + hj1j = DNRM2( n, wsp(j1v),1 ) +*--- if `happy breakdown' go straightforward at the end ... + if ( hj1j.le.break_tol ) then + print*,'happy breakdown: mbrkdwn =',j,' h =',hj1j + k1 = 0 + ibrkflag = 1 + mbrkdwn = j + tbrkdwn = t_now + t_step = t_out-t_now + goto 300 + endif + wsp(ih+(j-1)*mh+j) = hj1j + call DSCAL( n, 1.0d0/hj1j, wsp(j1v),1 ) + j1v = j1v + n + 200 continue + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + avnorm = DNRM2( n, wsp(j1v),1 ) +* +*--- set 1's for the 3-extended scheme ... +* + 300 continue + wsp(ih+mh*mbrkdwn) = 1.0d0 + wsp(ih+(m-1)*mh+m) = 0.0d0 + do i = 1,k1-1 + wsp(ih+(m+i)*mh+m+i-1) = 1.0d0 + enddo +* +*--- loop while ireject>> break_tol = tol +*>>> break_tol = anorm*tol + +* +*--- step-by-step integration ... +* + sgn = SIGN( 1.0d0,t ) + SQR1 = SQRT( 0.1d0 ) + call DCOPY( n, v,1, w,1 ) + + 100 if ( t_now.ge.t_out ) goto 500 + + nmult = nmult + 1 + call matvec( w, wsp(iv) ) + call DAXPY( n, 1.0d0, u,1, wsp(iv),1 ) + beta = DNRM2( n, wsp(iv),1 ) + if ( beta.eq.0.0d0 ) goto 500 + call DSCAL( n, 1.0d0/beta, wsp(iv),1 ) + do i = 1,mh*mh + wsp(ih+i-1) = 0.0d0 + enddo + + if ( nstep.eq.0 ) then +*--- obtain the very first stepsize ... + xm = 1.0d0/DBLE( m ) + p1 = tol*(((m+1)/2.72D0)**(m+1))*SQRT(2.0D0*3.14D0*(m+1)) + t_new = (1.0d0/anorm)*(p1/(4.0d0*beta*anorm))**xm + p1 = 10.0d0**(NINT( LOG10( t_new )-SQR1 )-1) + t_new = AINT( t_new/p1 + 0.55d0 ) * p1 + endif + nstep = nstep + 1 + t_step = MIN( t_out-t_now, t_new ) +* +*--- Lanczos loop ... +* + j1v = iv + n + do 200 j = 1,m + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + if ( j.gt.1 ) + . call DAXPY(n,-wsp(ih+(j-1)*mh+j-2),wsp(j1v-2*n),1,wsp(j1v),1) + hjj = DDOT( n, wsp(j1v-n),1, wsp(j1v),1 ) + call DAXPY( n, -hjj, wsp(j1v-n),1, wsp(j1v),1 ) + hj1j = DNRM2( n, wsp(j1v),1 ) + wsp(ih+(j-1)*(mh+1)) = hjj +*--- if `happy breakdown' go straightforward at the end ... + if ( hj1j.le.break_tol ) then + print*,'happy breakdown: mbrkdwn =',j,' h =',hj1j + k1 = 0 + ibrkflag = 1 + mbrkdwn = j + tbrkdwn = t_now + t_step = t_out-t_now + goto 300 + endif + wsp(ih+(j-1)*mh+j) = hj1j + wsp(ih+j*mh+j-1) = hj1j + call DSCAL( n, 1.0d0/hj1j, wsp(j1v),1 ) + j1v = j1v + n + 200 continue + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + avnorm = DNRM2( n, wsp(j1v),1 ) +* +*--- set 1's for the 3-extended scheme ... +* + 300 continue + wsp(ih+mh*mbrkdwn) = 1.0d0 + wsp(ih+m*mh+m-1) = 0.0d0 + wsp(ih+(m-1)*mh+m) = 0.0d0 + do i = 1,k1-1 + wsp(ih+(m+i)*mh+m+i-1) = 1.0d0 + enddo +* +*--- loop while ireject>> break_tol = tol +*>>> break_tol = anorm*tol + + sgn = SIGN( 1.0d0,t ) + SQR1 = SQRT( 0.1d0 ) + call ZCOPY( n, v,1, w,1 ) +* +*--- step-by-step integration ... +* + 100 if ( t_now.ge.t_out ) goto 500 + + nmult = nmult + 1 + call matvec( w, wsp(iv) ) + call ZAXPY( n, ONE, u,1, wsp(iv),1 ) + beta = DZNRM2( n, wsp(iv),1 ) + if ( beta.eq.0.0d0 ) goto 500 + call ZDSCAL( n, 1.0d0/beta, wsp(iv),1 ) + do i = 1,mh*mh + wsp(ih+i-1) = ZERO + enddo + + if ( nstep.eq.0 ) then +*--- obtain the very first stepsize ... + xm = 1.0d0/DBLE( m ) + p1 = tol*(((m+1)/2.72D0)**(m+1))*SQRT(2.0D0*3.14D0*(m+1)) + t_new = (1.0d0/anorm)*(p1/(4.0d0*beta*anorm))**xm + p1 = 10.0d0**(NINT( LOG10( t_new )-SQR1 )-1) + t_new = AINT( t_new/p1 + 0.55d0 ) * p1 + endif + nstep = nstep + 1 + t_step = MIN( t_out-t_now, t_new ) +* +*--- Arnoldi loop ... +* + j1v = iv + n + do 200 j = 1,m + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + do i = 1,j + hij = ZDOTC( n, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + call ZAXPY( n, -hij, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + wsp(ih+(j-1)*mh+i-1) = hij + enddo + hj1j = DZNRM2( n, wsp(j1v),1 ) +*--- if `happy breakdown' go straightforward at the end ... + if ( hj1j.le.break_tol ) then + print*,'happy breakdown: mbrkdwn =',j,' h =',hj1j + k1 = 0 + ibrkflag = 1 + mbrkdwn = j + tbrkdwn = t_now + t_step = t_out-t_now + goto 300 + endif + wsp(ih+(j-1)*mh+j) = CMPLX( hj1j ) + call ZDSCAL( n, 1.0d0/hj1j, wsp(j1v),1 ) + j1v = j1v + n + 200 continue + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + avnorm = DZNRM2( n, wsp(j1v),1 ) +* +*--- set 1's for the 3-extended scheme ... +* + 300 continue + wsp(ih+mh*mbrkdwn) = ONE + wsp(ih+(m-1)*mh+m) = ZERO + do i = 1,k1-1 + wsp(ih+(m+i)*mh+m+i-1) = ONE + enddo +* +*--- loop while ireject>> break_tol = tol +*>>> break_tol = anorm*tol + + sgn = SIGN( 1.0d0,t ) + SQR1 = SQRT( 0.1d0 ) + call ZCOPY( n, v,1, w,1 ) +* +*--- step-by-step integration ... +* + 100 if ( t_now.ge.t_out ) goto 500 + + nmult = nmult + 1 + call matvec( w, wsp(iv) ) + call ZAXPY( n, ONE, u,1, wsp(iv),1 ) + beta = DZNRM2( n, wsp(iv),1 ) + if ( beta.eq.0.0d0 ) goto 500 + call ZDSCAL( n, 1.0d0/beta, wsp(iv),1 ) + do i = 1,mh*mh + wsp(ih+i-1) = ZERO + enddo + + if ( nstep.eq.0 ) then +*--- obtain the very first stepsize ... + xm = 1.0d0/DBLE( m ) + p1 = tol*(((m+1)/2.72D0)**(m+1))*SQRT(2.0D0*3.14D0*(m+1)) + t_new = (1.0d0/anorm)*(p1/(4.0d0*beta*anorm))**xm + p1 = 10.0d0**(NINT( LOG10( t_new )-SQR1 )-1) + t_new = AINT( t_new/p1 + 0.55d0 ) * p1 + endif + nstep = nstep + 1 + t_step = MIN( t_out-t_now, t_new ) +* +*--- Lanczos loop ... +* + j1v = iv + n + do 200 j = 1,m + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + if ( j.gt.1 ) + . call ZAXPY(n,-wsp(ih+(j-1)*mh+j-2),wsp(j1v-2*n),1,wsp(j1v),1) + hjj = ZDOTC( n, wsp(j1v-n),1, wsp(j1v),1 ) + call ZAXPY( n, -hjj, wsp(j1v-n),1, wsp(j1v),1 ) + hj1j = DZNRM2( n, wsp(j1v),1 ) + wsp(ih+(j-1)*(mh+1)) = hjj + if ( hj1j.le.break_tol ) then + print*,'happy breakdown: mbrkdwn =',j,' h =',hj1j + k1 = 0 + ibrkflag = 1 + mbrkdwn = j + tbrkdwn = t_now + t_step = t_out-t_now + goto 300 + endif + wsp(ih+(j-1)*mh+j) = CMPLX( hj1j ) + wsp(ih+j*mh+j-1) = CMPLX( hj1j ) + call ZDSCAL( n, 1.0d0/hj1j, wsp(j1v),1 ) + j1v = j1v + n + 200 continue + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + avnorm = DZNRM2( n, wsp(j1v),1 ) +* +*--- set 1's for the 3-extended scheme ... +* + 300 continue + wsp(ih+mh*mbrkdwn) = ONE + wsp(ih+m*mh+m-1) = ZERO + wsp(ih+(m-1)*mh+m) = ZERO + do i = 1,k1-1 + wsp(ih+(m+i)*mh+m+i-1) = ONE + enddo +* +*--- loop while ireject +#include + +#include "log.h" + +void log_call (int argc, char * argv[]) { + std::ofstream phyxlog; + phyxlog.open ("phyx.logfile", std::ios::out | std::ios::app); + int count = 0; + for (auto& s : std::vector(argv, argv+argc)) { + phyxlog << s; + if (count < (argc - 1)) { + phyxlog << " "; + } + count++; + } + phyxlog << std::endl; + phyxlog.close(); +} diff --git a/src/log.h b/src/log.h new file mode 100644 index 0000000..f75d428 --- /dev/null +++ b/src/log.h @@ -0,0 +1,6 @@ +#ifndef PX_PHYXLOG_H +#define PX_PHYXLOG_H + +void log_call (int argc, char * argv[]); + +#endif /* PX_PHYXLOG_H */ diff --git a/src/log_manip.cpp b/src/log_manip.cpp new file mode 100644 index 0000000..69b1542 --- /dev/null +++ b/src/log_manip.cpp @@ -0,0 +1,764 @@ +#include +#include +#include +#include +#include +#include + +#include "log_manip.h" +#include "utils.h" + + +LogManipulator::LogManipulator (const std::string& logtype, + const std::vector& input_files, std::ostream* poos, + const bool& verbose):burnin_(0), nthin_(0), nrandom_(0), seed_(0), + count_(false), ntotal_samples_(0), num_cols_(0), num_cols_retain_(0), + files_(input_files) { + num_files_ = static_cast(input_files.size()); + logtype_ = logtype; + poos_ = poos; + verbose_ = verbose; +} + + +void LogManipulator::sample (const int& burnin, const int& nthin, + const int& nrandom, const long int& seed) { + burnin_ = burnin; + nthin_= nthin; + nrandom_ = nrandom; + seed_ = seed; + if (logtype_ == "parameter") { + sample_parameters(); + } else { + sample_trees(); + } +} + + +void LogManipulator::summarize (const int& burnin, const int& nthin) { + // need to: + // 1. read in and store values. may involve burnin/thinning/multiple values + // 2. for each, calculate ECC, ACT, mean, median, SD, etc. + burnin_ = burnin; + nthin_= nthin; + + collect_parameter_samples (); + return_statistics_table (); +} + + +void LogManipulator::return_statistics_table () { + // summarize shit + std::vector stat_names{"Mean", "Median", "Variance", "ESS", "ACT", "N"}; + double mean = 0.0; + double variance = 0.0; + double median = 0.0; + double ESS = 0.0; + double ACT = 0.0; + // n should be constant (i.e. a rectangular log) + auto nsamples = static_cast(parm_samples_[0].size()); + // need interval between samples i.e. how thinned + // first column in parm log is the state number + // converted to int since all read in as doubles + // note this assumes constant thinning. should be safe + // could only possibly be a problem when combining logs from analyses with different sampling settings + auto step_size = static_cast(parm_samples_[0][1] - parm_samples_[0][0]); + + // need to find the longest parameter name to set width of first column + const int colWidth = 12; // this value works nice with decimal and sci. notation + std::cout.precision(6); + //(*poos_) << std::fixed; + unsigned int longest_label = get_longest_label(parm_names_); + std::string pad = std::string(longest_label, ' '); + // header + (*poos_) << pad << " "; + for (const auto & stat_name : stat_names) { + (*poos_) << std::right << std::setw(colWidth) << stat_name << " "; + } + (*poos_) << std::endl; + for (size_t i = 1; i < static_cast(num_cols_); i++) { + calculate_summary_statistics (parm_samples_[i], mean, variance, median, + ESS, ACT, nsamples, step_size); + unsigned int diff = longest_label - static_cast(parm_names_[i].size()); + (*poos_) << parm_names_[i]; + if (diff > 0) { + pad = std::string(diff, ' '); + (*poos_) << pad; + } + (*poos_) << " "; + (*poos_) << std::right << std::setw(colWidth) << mean << " "; + (*poos_) << std::right << std::setw(colWidth) << median << " "; + (*poos_) << std::right << std::setw(colWidth) << variance << " "; + (*poos_) << std::right << std::setw(colWidth) << ESS << " "; + (*poos_) << std::right << std::setw(colWidth) << ACT << " "; + (*poos_) << std::right << std::setw(colWidth) << nsamples << std::endl; + } +} + + +/* +want things like: +1. mean - done +1.2. geometric mean? (only positive numbers) +1.3. harmonic mean? +1.4. std. error of mean? - nah +2. std. dev. and/or variance - done +3. median - done +4. range = min, max <- trivial to add, but desired? +5. 95% HPD range +6. ESS - done +7. ACT - done +8. n - done +*/ +// since each parameter is independent, could use multiple threads to speed things up... +void LogManipulator::calculate_summary_statistics (std::vector& vals, + double& mean, double& variance, double& median, double& ESS, double& ACT, + const int& n_samples, const int& step_size) { + // leave median for last, since it alters the ordering, which is needed for ACT + v_mean_variance(vals, mean, variance); + size_t ns = static_cast(n_samples); + + //-----------------------------------------------------------// + // effective sample size (ESS) and autocorrelation time (ACT) + // NOTE: there does not appear to be A correct way to compute ESS: + // https://stats.stackexchange.com/a/441628/263112 + // the (preliminary) stuff below uses the BEAST-flavour, in part because values can be validated + // indeed, at present this is just C++-ified code from the java source: + // https://tinyurl.com/847bpbpm + + // maximum lag to consider for ACT. may never be reached (i.e., smart early exit) + // increasing MAXIMUM_LAG greatly increases computation time (see loops below) + // it is not clear to me that 2000 is a reasonable value... + // - setting to 5000 gives different ESS & ACT in a predictable direction + // - i.e. ACT goes up, and ESS (obviously) goes down + // - this obviously only occurs when early exit is not triggered + // - although it did so with the first random log i cam across... + // anyway, keep it like this for now to make sure identical values are computed + + int MAXIMUM_LAG = 2000; + unsigned long max_lag = static_cast(std::min(n_samples - 1, MAXIMUM_LAG)); + std::vector gamma_stat(max_lag); + + double var_stat = 0.0; + double del1 = 0.0; + double del2 = 0.0; + + for (unsigned long i = 0; i < max_lag; i++) { + for (size_t j = 0; j < ns - i; j++) { + del1 = vals[j] - mean; + del2 = vals[j + i] - mean; + gamma_stat[i] += (del1 * del2); + } + + gamma_stat[i] /= static_cast(ns - i); + + if (i == 0) { + var_stat = gamma_stat[0]; + } else if (i % 2 == 0) { + if (gamma_stat[i - 1] + gamma_stat[i] > 0) { + var_stat += 2.0 * (gamma_stat[i - 1] + gamma_stat[i]); + } else { + //std::cout << "quitting at i = " << i << std::endl; + // quit since we've gone past where samples are autocorrelated + max_lag = i; + } + } + } + + // ACT + if (essentially_equal(gamma_stat[0], 0.0)) { + ACT = 0; + } else { + ACT = step_size * var_stat / gamma_stat[0]; + } + + // finally, ESS + if (essentially_equal(ACT, 0.0)) { + ESS = 1; + } else { + ESS = (step_size * n_samples) / ACT; + } + + // now we can compute the median (partially rearranges order + median = v_median(vals); +} + + +// like sample_parameters below, but store retained samples/values +void LogManipulator::collect_parameter_samples () { + if (!files_.empty()) { // hrm this should not be necessary... + bool first_entry = true; // use for initialization + std::vector terp; // a vector to reuse throughout + ntotal_samples_ = 0; + for (size_t i = 0; i < static_cast(num_files_); i++) { + std::string curfile = files_[i]; + infilestr_.open(curfile.c_str()); + std::string line; + bool first_line = true; + int par_counter = 0; // this is the raw number of parameter lines in a file + int sample_counter = 0; + while (getline_safe(infilestr_, line)) { + if (line.empty() || check_comment_line(line)) { + continue; + } + if (first_line) { + std::vector header = tokenize(line); + auto curpars = static_cast(header.size()); + if (i == 0) { // first header + num_cols_ = curpars; + parm_names_ = header; + if (first_entry) { + // let us initialize the sample collector + unsigned long n_expected = 10000000; // purposely an overestimate to avoid reallocation + for (size_t j = 0; j < static_cast(num_cols_); j++) { + parm_samples_.push_back(terp); + parm_samples_[j].reserve(n_expected); + } + first_entry = false; + } + } else { + // check that we've still got the same number of parameters i.e. files match + if (curpars != num_cols_) { + std::cerr << "Error: number of parameters in file " << (i + 1) + << "(" << curpars << ") does not match that from first file (" + << num_cols_ << "). Exiting." << std::endl; + exit(0); + } else if (header != parm_names_) { + // check that headers are identical + std::cerr << "Error: header for file " << (i + 1) + << "does not match that from first file. Exiting." << std::endl; + exit(0); + } + } + first_line = false; + continue; + } + if ((par_counter - burnin_) > 0 && (par_counter - burnin_) < nthin_) { + // skip because does not match sampling parameters + par_counter++; + continue; + } + if ((par_counter - burnin_) == 0) { + // keep first post-burnin sample from a file + par_counter++; + store_sample(line); + sample_counter++; + ntotal_samples_++; + continue; + } + if ((par_counter - burnin_) > 0 && (par_counter - burnin_) % nthin_ == 0) { + par_counter++; + store_sample(line); + sample_counter++; + ntotal_samples_++; + continue; + } + // skip because have not yet exceeded burnin + par_counter++; + } + indiv_raw_counts_.push_back(par_counter); + indiv_sample_totals_.push_back(sample_counter); + infilestr_.close(); + } + if (verbose_) { + for (size_t i = 0; i < static_cast(num_files_); i++) { + std::cout << files_[i] << ": " << indiv_sample_totals_[i] + << " samples retained (from original " << indiv_raw_counts_[i] + << " samples) for " << (num_cols_ - 1) << " variables." << std::endl; + } + std::cout << "Retained " << ntotal_samples_ << " total samples and " << (num_cols_ - 1) + << " variables across " << num_files_ << " input files." << std::endl; + } + if (ntotal_samples_ == 0) { + std::cerr << "Error: no samples remain to summarize. Check burnin/thinning. Exiting." << std::endl; + } + } +} + + +// convenience function to avoid code duplication +void LogManipulator::store_sample (std::string const& line) { + // first, tokenize + std::vector sample = tokenize(line); + // convert to double. note that this include the first entry (state) which is an int + std::vector converted = string_v_to_double_v(sample); + // finally, store these puppies in the initialized container parm_samples_ + for (size_t i = 0; i < static_cast(num_cols_); i++) { + parm_samples_[i].push_back(converted[i]); + } +} + + +void LogManipulator::count () { + if (logtype_ == "parameter") { + count_parameter_samples(); + } else { + count_tree_samples(); + } +} + + +// TODO: should counting allow burnin/thinning? nah. +void LogManipulator::count_parameter_samples () { + num_cols_ = 0; + if (!files_.empty()) { + for (size_t i = 0; i < static_cast(num_files_); i++) { + std::string curfile = files_[i]; + infilestr_.open(curfile.c_str()); + std::string line; + bool first_line = true; + int num_samps = 0; + while (getline_safe(infilestr_, line)) { + if (line.empty() || check_comment_line(line)) { + continue; + } + if (first_line) { + std::vector header = tokenize(line); + auto curpars = static_cast(header.size()); + if (i == 0) { // first header + num_cols_ = curpars; + parm_names_ = header; + } else { + // check that we've still got the same number of parameters i.e. files match + if (curpars != num_cols_) { + std::cerr << "Error: number of parameters in file " << (i + 1) + << "(" << curpars << ") does not match that from first file (" + << num_cols_ << "). Exiting." << std::endl; + exit(0); + } else if (header != parm_names_) { + // check that headers are identical + std::cerr << "Error: header for file " << (i + 1) + << "does not match that from first file. Exiting." << std::endl; + exit(0); + } + } + first_line = false; + continue; + } + num_samps++; + } + indiv_sample_totals_.push_back(num_samps); + infilestr_.close(); + } + //ntotal_samples_ = accumulate(indiv_totals_.begin(), indiv_totals_.end(), 0); + //(*poos_) << "Counted " << ntotal_samples_ << " total samples and " << (num_cols_ - 1) + // << " variables across " << num_files_ << " files." << std::endl; + } else { + + // stream stuff will go here (maybe) + + } + ntotal_samples_ = std::accumulate(indiv_sample_totals_.begin(), indiv_sample_totals_.end(), 0); +} + + +void LogManipulator::count_tree_samples () { + if (!files_.empty()) { + for (size_t i = 0; i < static_cast(num_files_); i++) { + std::string curfile = files_[i]; + infilestr_.open(curfile.c_str()); + std::string line; + int num_samps = 0; + while (getline_safe(infilestr_, line)) { + if (line.empty() || check_comment_line(line)) { + continue; + } + std::vector tokens = tokenize(line); + std::string first = tokens[0]; + std::transform(first.begin(), first.end(), first.begin(), ::tolower); + if (first == "tree") { + num_samps++; + } + } + indiv_sample_totals_.push_back(num_samps); + infilestr_.close(); + } + //ntotal_samples_ = accumulate(indiv_totals_.begin(), indiv_totals_.end(), 0); + //(*poos_) << "Counted " << ntotal_samples_ << " total samples and " << (num_cols_ - 1) + // << " variables across " << num_files_ << " files." << std::endl; + } else { + + // stream stuff will go here (maybe) + + } + ntotal_samples_ = std::accumulate(indiv_sample_totals_.begin(), indiv_sample_totals_.end(), 0); +} + + +void LogManipulator::get_sample_counts () const { + size_t nf = static_cast(num_files_); + if (logtype_ == "parameter") { + for (size_t i = 0; i < nf; i++) { + (*poos_) << files_[i] << ": " << indiv_sample_totals_[i] << " samples of " + << (num_cols_ - 1) << " variables." << std::endl; + } + if (num_files_ > 1) { + (*poos_) << "Counted " << ntotal_samples_ << " total samples of " + << (num_cols_ - 1) << " variables across " << num_files_ << " files." << std::endl; + } + } else { + for (size_t i = 0; i < nf; i++) { + (*poos_) << files_[i] << ": " << indiv_sample_totals_[i] << " trees." << std::endl; + } + if (num_files_ > 1) { + (*poos_) << "Counted " << ntotal_samples_ << " total tree samples across " + << num_files_ << " files." << std::endl; + } + } +} + + +void LogManipulator::get_column_names () { + if (!files_.empty()) { + if (num_files_ == 1) { + std::string curfile = files_[0]; + infilestr_.open(curfile.c_str()); + std::string line; + while (getline_safe(infilestr_, line)) { + if (line.empty() || check_comment_line(line)) { + continue; + } + std::vector header = tokenize(line); + auto curpars = static_cast(header.size()); + num_cols_ = curpars; + parm_names_ = header; + break; + } + for (int i = 0; i < num_cols_; i++) { + (*poos_) << i+1 << ". " << parm_names_[static_cast(i)] << std::endl; + } + } else { + // multiple files. make sure number/name/order of columns is identical + + } + } +} + + +// delete variables (columns) from a large parameter log +// assumes a single log file +// assume that burnin etc. is done separately? +void LogManipulator::delete_columns (const std::vector& col_ids) { + if (!files_.empty()) { + ntotal_samples_ = 0; + std::string curfile = files_[0]; + infilestr_.open(curfile.c_str()); + std::string line; + bool first_line = true; + int sample_counter = 0; + std::vector cols_to_retain; + + while (getline_safe(infilestr_, line)) { + if (line.empty() || check_comment_line(line)) { + continue; + } + if (first_line) { + std::vector header = tokenize(line); + auto curpars = static_cast(header.size()); + num_cols_ = curpars; + parm_names_ = header; + + cols_to_retain.resize(static_cast(num_cols_)); + + // check that right end of col_ids is valid (0 already checked upstream) + // vector has been sorted + if (col_ids.back() > num_cols_) { + std::cerr << "Warning: column numbers are 1-indexed. Exiting." << std::endl; + exit(0); + } + + std::iota(cols_to_retain.begin(), cols_to_retain.end(), 0); + + // remove unwanted column indices (reverse order) + for (auto i = col_ids.rbegin(); i < col_ids.rend(); i++) { + // subtract 1 because input is 1-indexed + cols_to_retain.erase(cols_to_retain.begin()+(*i)-1); + } + + num_cols_retain_ = static_cast(cols_to_retain.size()); + for (int i = 0; i < num_cols_retain_; i++) { + (*poos_) << header[static_cast(cols_to_retain[static_cast(i)])]; + if (i < (num_cols_retain_ - 1)) { + (*poos_) << "\t"; + } + } + (*poos_) << std::endl; + first_line = false; + continue; + } + std::vector samp = tokenize(line); + for (int i = 0; i < num_cols_retain_; i++) { + (*poos_) << samp[static_cast(cols_to_retain[static_cast(i)])]; + if (i < (num_cols_retain_ - 1)) { + (*poos_) << "\t"; + } + } + (*poos_) << std::endl; + sample_counter++; + } + + if (verbose_) { + std::cout << "Retained " << sample_counter << " samples for " + << num_cols_retain_ << " variables." << std::endl; + } + } +} + + +// complement of above: retain columns passed in +void LogManipulator::retain_columns (const std::vector& col_ids) { + if (!files_.empty()) { + ntotal_samples_ = 0; + std::string curfile = files_[0]; + infilestr_.open(curfile.c_str()); + std::string line; + bool first_line = true; + int sample_counter = 0; + std::vector cols_to_retain(static_cast(col_ids.size()), 0); + for (int col_id : col_ids) { + // subtract 1 because input is 1-indexed + cols_to_retain[static_cast(col_id)] = col_id - 1; + } + num_cols_retain_ = static_cast(cols_to_retain.size()); + + while (getline_safe(infilestr_, line)) { + if (line.empty() || check_comment_line(line)) { + continue; + } + if (first_line) { + std::vector header = tokenize(line); + auto curpars = static_cast(header.size()); + num_cols_ = curpars; + + // check that right end of col_ids is valid (0 already checked upstream) + // vector has been sorted + if (col_ids.back() > num_cols_) { + std::cerr << "Warning: column numbers are 1-indexed. Exiting." << std::endl; + exit(0); + } + + parm_names_ = header; + for (int i = 0; i < num_cols_retain_; i++) { + (*poos_) << header[static_cast(cols_to_retain[static_cast(i)])]; + if (i < (num_cols_retain_ - 1)) { + (*poos_) << "\t"; + } + } + (*poos_) << std::endl; + first_line = false; + continue; + } + std::vector samp = tokenize(line); + for (int i = 0; i < num_cols_retain_; i++) { + (*poos_) << samp[static_cast(cols_to_retain[static_cast(i)])]; + if (i < (num_cols_retain_ - 1)) { + (*poos_) << "\t"; + } + } + (*poos_) << std::endl; + sample_counter++; + } + + if (verbose_) { + std::cout << "Retained " << sample_counter << " samples for " + << num_cols_retain_ << " variables." << std::endl; + } + } +} + + +void LogManipulator::sample_parameters () { + if (!files_.empty()) { // hrm this should not be necessary... + ntotal_samples_ = 0; + for (size_t i = 0; i < static_cast(num_files_); i++) { + std::string curfile = files_[i]; + infilestr_.open(curfile.c_str()); + std::string line; + bool first_line = true; + int par_counter = 0; // this is the raw number of parameter lines in a file + int sample_counter = 0; + while (getline_safe(infilestr_, line)) { + if (line.empty() || check_comment_line(line)) { + continue; + } + if (first_line) { + std::vector header = tokenize(line); + auto curpars = static_cast(header.size()); + if (i == 0) { // first header + num_cols_ = curpars; + parm_names_ = header; + for (int j = 0; j < num_cols_; j++) { + (*poos_) << parm_names_[static_cast(j)]; + if (j < (num_cols_ - 1)) { + (*poos_) << "\t"; + } + } + (*poos_) << std::endl; + } else { + // check that we've still got the same number of parameters i.e. files match + if (curpars != num_cols_) { + std::cerr << "Error: number of parameters in file " << (i + 1) + << "(" << curpars << ") does not match that from first file (" + << num_cols_ << "). Exiting." << std::endl; + exit(0); + } else if (header != parm_names_) { + // check that headers are identical + std::cerr << "Error: header for file " << (i + 1) + << "does not match that from first file. Exiting." << std::endl; + exit(0); + } + } + first_line = false; + continue; + } + if ((par_counter - burnin_) > 0 && (par_counter - burnin_) < nthin_) { + // skip because does not match sampling parameters + par_counter++; + continue; + } + if ((par_counter - burnin_) == 0) { + // keep first post-burnin sample from a file + par_counter++; + write_reformatted_sample(line, ntotal_samples_); + sample_counter++; + ntotal_samples_++; + continue; + } + if ((par_counter - burnin_) > 0 && (par_counter - burnin_) % nthin_ == 0) { + par_counter++; + write_reformatted_sample(line, ntotal_samples_); + sample_counter++; + ntotal_samples_++; + continue; + } + // skip because have not yet exceeded burnin + par_counter++; + } + indiv_raw_counts_.push_back(par_counter); + indiv_sample_totals_.push_back(sample_counter); + infilestr_.close(); + } + if (verbose_) { + for (size_t i = 0; i < static_cast(num_files_); i++) { + std::cout << files_[i] << ": " << indiv_sample_totals_[i] + << " samples retained (from original " << indiv_raw_counts_[i] + << " samples) for " << (num_cols_ - 1) << " variables." << std::endl; + } + std::cout << "Retained " << ntotal_samples_ << " total samples and " << (num_cols_ - 1) + << " variables across " << num_files_ << " input files." << std::endl; + } + } +} + + +void LogManipulator::sample_trees () { + if (!files_.empty()) { + ntotal_samples_ = 0; + size_t nf = static_cast(num_files_); + for (size_t i = 0; i < nf; i++) { + std::string curfile = files_[i]; + infilestr_.open(curfile.c_str()); + std::string line; + int tree_counter = 0; // this is the raw number of tree lines in a file + int sample_counter = 0; + bool trees_encountered = false; + while (getline_safe(infilestr_, line)) { + if (line.empty() || check_comment_line(line)) { + if (i == 0) { + // keep comment information from _top_ of first file + if (!trees_encountered) { + (*poos_) << line << std::endl; + } + } + continue; + } + std::vector tokens = tokenize(line); + std::string first = tokens[0]; + std::transform(first.begin(), first.end(), first.begin(), ::tolower); + if (first == "tree") { + if (tree_counter == 0) { + trees_encountered = true; + } + if (ntotal_samples_ == 0) { + // grab tree naming scheme + get_tree_name_prefix(line); + } + if ((tree_counter - burnin_) > 0 && (tree_counter - burnin_) < nthin_) { + // skip because does not match sampling parameters + tree_counter++; + continue; + } + if ((tree_counter - burnin_) == 0) { + // keep first post-burnin sample from a file + tree_counter++; + write_reformatted_sample(line, ntotal_samples_); + sample_counter++; + ntotal_samples_++; + continue; + } + if ((tree_counter - burnin_) > 0 && (tree_counter - burnin_) % nthin_ == 0) { + tree_counter++; + write_reformatted_sample(line, ntotal_samples_); + sample_counter++; + ntotal_samples_++; + continue; + } + // skip because have not yet exceeded burnin + tree_counter++; + } else { // not a tree line. only care about first file here. don't want anything below trees + // keep header from first file + // likely includes translation table + if (i == 0 && !trees_encountered) { + (*poos_) << line << std::endl; + } + } + } + indiv_raw_counts_.push_back(tree_counter); + indiv_sample_totals_.push_back(sample_counter); + infilestr_.close(); + } + (*poos_) << "End;" << std::endl; + + if (verbose_) { + for (size_t i = 0; i < nf; i++) { + std::cerr << files_[i] << ": " << indiv_sample_totals_[i] + << " tree samples retained (from original " << indiv_raw_counts_[i] + << " samples)." << std::endl; + } + std::cerr << "Retained " << ntotal_samples_ << " total tree samples across " + << num_files_ << " input files." << std::endl; + } + } +} + + +// gen.NNN from Mrbayes, STATE_NNN from BEAST +// try to be general here, though: take whatever precedes the sample number +void LogManipulator::get_tree_name_prefix (std::string& sample) { + std::vector terp = tokenize(sample); + std::string tree_name = terp[1]; + auto found = static_cast(tree_name.find_first_of("0123456789")); + tree_name.replace(tree_name.begin(), tree_name.end(), tree_name.begin(), + tree_name.begin()+found); + tree_name_prefix_ = tree_name; +} + + +void LogManipulator::write_reformatted_sample (std::string& sample, + int& sample_num) { + std::vector terp = tokenize(sample); + if (logtype_ == "parameter") { + (*poos_) << sample_num; + for (int i = 1; i < num_cols_; i++) { + (*poos_) << "\t" << terp[static_cast(i)]; + } + (*poos_) << std::endl; + } else { + // format should be: tree tree_name lots_of_other_optional_things + (*poos_) << "tree " << tree_name_prefix_ << sample_num; + for (unsigned int i = 2; i < terp.size(); i++) { + (*poos_) << " " << terp[i]; + } + (*poos_) << std::endl; + } +} diff --git a/src/log_manip.h b/src/log_manip.h new file mode 100644 index 0000000..a1dd482 --- /dev/null +++ b/src/log_manip.h @@ -0,0 +1,70 @@ +#ifndef PX_LOG_MANIP_H +#define PX_LOG_MANIP_H + +#include +#include +#include +#include + +class LogManipulator { +private: + std::string logtype_; // "parameter" or "tree" + + // sampling parameters. default to full (no burnin, retain all) + int burnin_; + int nthin_; + + int nrandom_; + long int seed_; + + bool count_; // just count (i.e. do not edit) + bool verbose_; + + std::vector indiv_sample_totals_; // sample counts per file + std::vector indiv_raw_counts_; // all samples in a file, including those not retained + int ntotal_samples_; + int num_files_; + int num_cols_; + int num_cols_retain_; + + std::string tree_name_prefix_; + + std::vector files_; + //std::istream* pios_; + std::ostream* poos_; + std::ifstream infilestr_; + std::vector parm_names_; + + std::vector< std::vector > parm_samples_; + + void count_parameter_samples (); + void count_tree_samples (); + void sample_parameters (); + void sample_trees (); + void write_reformatted_sample (std::string& sample, int& sample_num); + void get_tree_name_prefix (std::string& sample); + void collect_parameter_samples (); + void store_sample (std::string const& line); + void return_statistics_table (); + void calculate_summary_statistics (std::vector vals, double& mean, + double& variance, double& ESS, double& ACT, int& n_samples, const int& step_size); + void calculate_summary_statistics (std::vector& vals, double& mean, + double& variance, double& median, double& ESS, double& ACT, const int& n_samples, + const int& step_size); +public: + // not using this one + LogManipulator (const std::string& logtype, const std::vector& input_files, + std::istream* pios, std::ostream* poos); + LogManipulator (const std::string& logtype, const std::vector& input_files, + std::ostream* poos, const bool& verbose); + void count (); + void get_sample_counts () const; + void get_column_names (); + void sample (const int& burnin, const int& nthin, const int& nrandom, + const long int& seed); + void delete_columns (const std::vector& col_ids); + void retain_columns (const std::vector& col_ids); + void summarize (const int& burnin, const int& nthin); // calculate summary statistics over samples +}; + +#endif /* PX_LOG_MANIP_H */ diff --git a/src/main_aa2cdn.cpp b/src/main_aa2cdn.cpp new file mode 100644 index 0000000..1f2fe92 --- /dev/null +++ b/src/main_aa2cdn.cpp @@ -0,0 +1,210 @@ +#include +#include +#include +#include +#include + +#include "aa2cdn.h" +#include "utils.h" +#include "sequence.h" +#include "seq_reader.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Generate a codon alignment from aligned amino acids and unaligned nucleotides." << std::endl; + std::cout << "Taxa found in only 1 input file will be removed." << std::endl; + std::cout << "This will take fasta, fastq, phylip, and nexus inputs." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxaa2cdn [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -a, --aaseqf=FILE input sequence file, STDIN otherwise" << std::endl; + std::cout << " -n, --nucseqf=FILE input sequence file, STDIN otherwise" << std::endl; + std::cout << " -r, --rmlastcdn remove last codon (default: false)" << std::endl; + std::cout << " -o, --outf=FILE output fasta file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxaa2cdn 1.3\n"; + vl += "Copyright (C) 2015-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph F. Walker, Joseph W. Brown, Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"aaseqf", required_argument, nullptr, 'a'}, + {"nucseqf", required_argument, nullptr, 'n'}, + {"outf", required_argument, nullptr, 'o'}, + {"rmlastcdn", no_argument, nullptr, 'r'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool outfileset = false; + bool nucfileset = false; + bool rm_last = false; + char * aaseqf = nullptr; + char * nucseqf = nullptr; + char * outf = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "a:o:n:rhVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 'a': + fileset = true; + aaseqf = strdup(optarg); + check_file_exists(aaseqf); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'n': + nucfileset = true; + nucseqf = strdup(optarg); + check_file_exists(nucseqf); + break; + case 'r': + rm_last = true; + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(aaseqf, outf); + } + if (nucfileset && outfileset) { + check_inout_streams_identical(nucseqf, outf); + } + + if (!fileset) { + std::cerr << "Error: you must specify an input amino acid sequence file. Exiting." << std::endl; + exit(0); + } + if (!nucfileset) { + std::cerr << "Error: you must specify an input nucleotide sequence file. Exiting." << std::endl; + exit(0); + } + + std::ostream * poos = nullptr; + std::ofstream * ofstr = nullptr; + std::ifstream * fstr = nullptr; + std::istream * pios = nullptr; + std::ifstream * nucfstr = nullptr; + std::istream * nucpios = nullptr; + + if (fileset) { + fstr = new std::ifstream(aaseqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (nucfileset) { + nucfstr = new std::ifstream(nucseqf); + nucpios = nucfstr; + } else { + nucpios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + // use general purpose reader + std::vector nuc_seqs; + std::vector aa_seqs; + std::string alphaName; + + // read in nucleotide seqs + nuc_seqs = ingest_alignment(nucpios, alphaName); + if (alphaName != "DNA") { + std::cerr << "Error: incorrect alignment type provided. DNA was expected, but " + << alphaName << " detected. Exiting." << std::endl; + exit(0); + } + + bool inFrame = true; + for (auto & nuc_seq : nuc_seqs) { + unsigned int curN = nuc_seq.get_length(); + if (curN % 3 != 0) { + std::cerr << "Error: nucleotide sequence length for '" << nuc_seq.get_id() + << "' is not a multiple of 3." << std::endl; + inFrame = false; + } + } + if (!inFrame) { + std::cerr << "Error: nucleotide alignment does not appear to be in frame. Exiting." << std::endl; + exit(0); + } + + // and amino acid alignment + aa_seqs = ingest_alignment(pios, alphaName); + if (alphaName != "AA") { + std::cerr << "Error: incorrect alignment type provided. Amino acids was expected, but " + << alphaName << " detected. Exiting." << std::endl; + exit(0); + } + + AAtoCDN A2C(nuc_seqs, aa_seqs, rm_last); + A2C.write_codon_alignment(poos); + + if (fileset) { + fstr->close(); + delete pios; + } + if (nucfileset) { + nucfstr->close(); + delete nucpios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_bd_fit.cpp b/src/main_bd_fit.cpp new file mode 100644 index 0000000..85e48b4 --- /dev/null +++ b/src/main_bd_fit.cpp @@ -0,0 +1,190 @@ +#include +#include +#include +#include +#include +#include +#include +#include +#include + +#include "tree_reader.h" +#include "tree.h" +#include "tree_utils.h" +#include "utils.h" +#include "bd_fit.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Fit a lineage diversification model to a tree." << std::endl; + std::cout << "This will take a newick- or nexus-formatted tree from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxbdfit [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input treefile, STDIN otherwise" << std::endl; + std::cout << " -m, --model=STRING diversification model. either 'yule', 'bd' (default), or 'best'" << std::endl; + std::cout << " -o, --outf=FILE output file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxbdfit 1.3\n"; + vl += "Copyright (C) 2016-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"model", required_argument, nullptr, 'm'}, + {"outf", required_argument, nullptr, 'o'}, + {"showd", no_argument, nullptr, 's'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool tfileset = false; + + char * treef = nullptr; + char * outf = nullptr; + + std::string model = "bd"; + std::set avail_models{"bd", "yule", "best"}; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:m:o:x:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + tfileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'm': + // check valid models here + model = string_to_lower(optarg); + if (avail_models.find(model) == avail_models.end()) { + std::cerr << "Error: model '" << model << "' is not recognized. Exiting." + << std::endl; + exit(0); + } + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (tfileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + if (tfileset) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + + bool going = true; + if (ft == 1) { + while (going) { + Tree * tree = read_next_tree_from_stream_newick (*pios, retstring, &going); + if (going) { + // in addition to checking ultramtericity, the following sets node heights + if (is_ultrametric_paths(tree)) { + BDFit bd(tree, model); + bd.get_pars(poos); + delete tree; + } else { + std::cerr << "Error: tree is not ultrametric. Exiting." << std::endl; + exit(0); + } + } + } + } + if (ft == 0) { + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + while (going) { + Tree * tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (tree != nullptr) { + // in addition to checking ultramtericity, the following sets node heights + if (is_ultrametric_paths(tree)) { + BDFit bd(tree, model); + bd.get_pars(poos); + delete tree; + } else { + std::cerr << "Error: tree is not ultrametric. Exiting." << std::endl; + exit(0); + } + } + } + } + + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_bd_sim.cpp b/src/main_bd_sim.cpp new file mode 100644 index 0000000..7fc182c --- /dev/null +++ b/src/main_bd_sim.cpp @@ -0,0 +1,187 @@ +#include +#include +#include +#include +#include +#include + +#include "node.h" +#include "tree_reader.h" +#include "string_node_object.h" +#include "vector_node_object.h" +#include "tree.h" +#include "utils.h" +#include "bd_sim.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Birth-death tree simulator." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxbdsim [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -e, --extant=INT number of extant species, alt to time" << std::endl; + std::cout << " -t, --time=DOUBLE timespan of simulation (age of root), alt to extant" << std::endl; + std::cout << " -b, --birth=DOUBLE birth rate, default=1" << std::endl; + std::cout << " -d, --death=DOUBLE death rate, default=0" << std::endl; + std::cout << " -n, --nreps=INT number of replicates, default=1" << std::endl; + std::cout << " -s, --showextinct show lineages that went extinct, default=false" << std::endl; + std::cout << " -x, --seed=INT random number seed, clock otherwise" << std::endl; + std::cout << " -v, --verbose print per-tree simulation summary (to cerr)" << std::endl; + std::cout << " -o, --outf=FILE output file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + + std::string get_version_line () { + std::string vl = "pxbdsim 1.3\n"; + vl += "Copyright (C) 2013-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim), Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"extant", required_argument, nullptr, 'e'}, + {"time", required_argument, nullptr, 't'}, + {"birth", required_argument, nullptr, 'b'}, + {"death", required_argument, nullptr, 'd'}, + {"nreps", required_argument, nullptr, 'n'}, + {"outf", required_argument, nullptr, 'o'}, + {"showextinct", no_argument, nullptr, 's'}, + {"seed", required_argument, nullptr, 'x'}, + {"verbose", no_argument, nullptr, 'v'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool timeset = false; + bool extantset = false; + char * outf = nullptr; + int ext = 0; + int nreps = 1; + double time = 0.0; + double birth = 1.0; + double death = 0.0; + bool showd = false; + bool verbose = false; + long int seed = -1; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "e:t:b:d:n:o:x:vshVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 'e': + ext = string_to_int(optarg, "-e"); + extantset = true; + break; + case 't': + time = string_to_double(optarg, "-t"); + timeset = true; + break; + case 'b': + birth = string_to_double(optarg, "-b"); + if (birth <= 0) { + std::cerr << "Error: birth rate must be > 0. Exiting." << std::endl; + exit(0); + } + break; + case 'd': + death = string_to_double(optarg, "-d"); + if (death < 0) { + std::cerr << "Error: death rate must be >= 0. Exiting." << std::endl; + exit(0); + } + break; + case 'n': + nreps = string_to_int(optarg, "-n"); + break; + case 'v': + verbose = true; + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'x': + seed = string_to_long_int(optarg, "-x"); + break; + case 's': + showd = true; + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (!extantset && !timeset) { + std::cerr << "Error: you have to set -e or -t. Exiting." << std::endl; + exit(0); + } + if (timeset && extantset) { + std::cerr << "Error: set -e or -t, not both. Exiting." << std::endl; + exit(0); + } + + std::ostream * poos = nullptr; + std::ofstream * ofstr = nullptr; + + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + BirthDeathSimulator bd(ext, time, birth, death, seed); + for (int i = 0; i < nreps; i++) { + Tree * bdtr = bd.make_tree(showd); + + // only extinct-pruned scenarios can produce a single terminal tree + // tree writer has a problem with this, so need to manually fix + if (!showd && bdtr->getExtantNodeCount() == 1) { + (*poos) << "(" << bdtr->getRoot()->getNewick(true) << ");" << std::endl; + } else { + (*poos) << bdtr->getRoot()->getNewick(true) << ";" << std::endl; + } + // print simulation summary + if (verbose) { + std::cerr << bd.get_sim_summary() << std::endl; + } + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_boot.cpp b/src/main_boot.cpp new file mode 100644 index 0000000..732600e --- /dev/null +++ b/src/main_boot.cpp @@ -0,0 +1,166 @@ +/* + Bare-bones sequence alignment resampling. Default is bootstrap, alternative is jackknife. + Conserved-partition bootstrap now implemented. +*/ + +#include +#include +#include +#include +#include +#include + +#include "utils.h" +#include "sequence.h" +#include "seq_reader.h" +#include "seq_sample.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Sequence alignment bootstrap or jackknife resampling." << std::endl; + std::cout << "This will take fasta, fastq, phylip, and nexus formats from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxboot [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -s, --seqf=FILE input sequence file, STDIN otherwise" << std::endl; + std::cout << " -p, --partf=FILE file listing empirical partitions: NAME = START-STOP[\\INTERVAL]" << std::endl; + std::cout << " -f, --frac=DOUBLE jackknife percentage, default bootstrap (i.e. -f 1.0)" << std::endl; + std::cout << " -x, --seed=INT random number seed, clock otherwise" << std::endl; + std::cout << " -o, --outf=FILE output sequence file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxboot 1.3\n"; + vl += "Copyright (C) 2013-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"outf", required_argument, nullptr, 'o'}, + {"partf", required_argument, nullptr, 'p'}, + {"frac", required_argument, nullptr, 'f'}, + {"seed", required_argument, nullptr, 'x'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool fileset = false; + bool partitioned = false; + double jackfract = 0.0; + char * outf = nullptr; + char * seqf = nullptr; + std::string partf; + long int seed = -1; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:o:p:f:x:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'p': + partitioned = true; + partf = strdup(optarg); + break; + case 'f': + jackfract = string_to_double(optarg, "-f"); + if (jackfract < 0 || jackfract > 1) { + std::cerr << "Error: jackknife fraction must be 0 < x < 1. Exiting." << std::endl; + exit(0); + } + break; + case 'x': + seed = string_to_long_int(optarg, "-x"); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + + if (partitioned && (jackfract != 0.0)) { + std::cerr << "Error: partitioned jackknife not implemented. Exiting." << std::endl; + exit(0); + } + + SequenceSampler ss(pios, seed, jackfract, partf); + ss.write_resampled_seqs(poos); + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_bp.cpp b/src/main_bp.cpp new file mode 100644 index 0000000..c2153a4 --- /dev/null +++ b/src/main_bp.cpp @@ -0,0 +1,683 @@ +#include +#include +#include +#include +#include +#include +#include +#include + +#include "tree.h" +#include "tree_reader.h" +#include "utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "This will print out bipartitions found in treefile." << std::endl; + std::cout << "Trees are assumed rooted unless the -e argument is provided." << std::endl; + std::cout << "This will take a newick- or nexus-formatted tree from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxbp [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input treefile, STDIN otherwise" << std::endl; + std::cout << " -v, --verbose give more output" << std::endl; + std::cout << " -e, --edgeall force edgewise (not node - so when things are unrooted) and" << std::endl; + std::cout << " assume all taxa are present in all trees" << std::endl; + std::cout << " -u, --uniquetree output unique trees and *no* other output" << std::endl; + std::cout << " -m, --maptree=FILE put the bipart freq on the edges of this tree. This will " << std::endl; + std::cout << " create a *.pxbpmapped.tre file." << std::endl; + std::cout << " -c, --cutoff skip biparts that have support lower than this." << std::endl; + std::cout << " -s, --suppress don't print all the output (maybe you use this" << std::endl; + std::cout << " with the maptree feature" << std::endl; + std::cout << " -o, --outf=FILE output file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxbp 1.3\n"; + vl += "Copyright (C) 2017-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"verbose", no_argument, nullptr, 'v'}, + {"edgeall", no_argument, nullptr, 'e'}, + {"uniquetree", no_argument, nullptr, 'u'}, + {"maptree", required_argument, nullptr, 'm'}, + {"cutoff", required_argument, nullptr, 'c'}, + {"suppress", no_argument, nullptr, 's'}, + {"first", no_argument, nullptr, 'f'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool outfileset = false; + bool mapfileset = false; + bool verbose = false; + bool edgewisealltaxa = false; + bool uniquetree = false; + bool suppress = false; + bool cutoff = false; + bool firsttree = false; + char * treef = nullptr; + char * mtreef = nullptr; + char * outf = nullptr; + double cutnum = 0; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:o:m:c:vseufhVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + fileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'v': + verbose = true; + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'e': + edgewisealltaxa = true; + break; + case 'u': + uniquetree = true; + break; + case 's': + suppress = true; + break; + case 'f': + firsttree = true; + break; + case 'c': + cutnum = string_to_double(optarg, "-c"); + cutoff = true; + break; + case 'm': + mapfileset = true; + mtreef = strdup(optarg); + check_file_exists(mtreef); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + std::istream * pios = nullptr; + std::istream * mpios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ifstream * mfstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (fileset) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + // map file + if (mapfileset) { + mfstr = new std::ifstream(mtreef); + mpios = mfstr; + } + + //------READ TREES + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + + std::vector trees; + bool going = true; + if (ft == 0) { + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + while (going) { + Tree * tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (tree != nullptr) { + trees.push_back(tree); + } + } + } else if (ft == 1) { + while (going) { + Tree * tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (going) { + trees.push_back(tree); + } + } + } + //-----END READ TREES + //-----READ MAP TREE + Tree * maptree = nullptr; + if (mapfileset) { + ft = test_tree_filetype_stream(*mpios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + + going = true; + if (ft == 0) { + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*mpios, &translation_table, &retstring); + while (going) { + maptree = read_next_tree_from_stream_nexus(*mpios, retstring, ttexists, + &translation_table, &going); + if (maptree != nullptr) { + going = false; + break; + } + } + } else if (ft == 1) { + while (going) { + maptree = read_next_tree_from_stream_newick(*mpios, retstring, &going); + if (going) { + going = false; + break; + } + } + } + } + //----END READ MAP TREE + + size_t numtrees = trees.size(); + if (numtrees == 0) { + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + std::cerr << "there are no trees;" << std::endl; + } + + // get the biparts for the trees + std::vector names; + std::set names_s; + std::map name_index; + std::map name_st_index; + // added to make sure we have all the names if it is partially overlapping + for (auto & tree : trees) { + for (int i = 0; i < static_cast(tree->getExternalNodeCount()); i++) { + std::string tname = tree->getExternalNode(static_cast(i))->getName(); + if (find(names.begin(), names.end(), tname) == names.end()) { + name_index[tname] = i; + names.push_back(tname); + name_st_index[i] = tname; + } + } + } + copy(names.begin(), names.end(), inserter(names_s, names_s.begin())); + + std::vector > biparts; // first part of the bipart + std::vector > biparts2; // second part of the bipart + std::vector > not_included; // the names that aren't in the tree + std::vector bp_count; + for (unsigned long i = 0; i < numtrees; i++) { + // get the biparts + bool unrooted = false; + unsigned int numch = trees[i]->getRoot()->getChildCount(); + if (numch > 2u) { + unrooted = true; + } + std::vector rt_nms = trees[i]->getRoot()->get_leave_names(); + std::set rt_nms_set; + copy(rt_nms.begin(), rt_nms.end(), inserter(rt_nms_set, rt_nms_set.begin())); + // get the ones that aren't in the tree at all + std::vector not_included_nms(rt_nms_set.size()); + std::vector not_included_i; + std::vector::iterator it2; + it2 = std::set_difference(names_s.begin(), names_s.end(), rt_nms_set.begin(), + rt_nms_set.end(), not_included_nms.begin()); + not_included_nms.resize(static_cast(it2-not_included_nms.begin())); + for (const auto & not_included_nm : not_included_nms) { + std::cerr << " not included: " << not_included_nm << std::endl; + not_included_i.push_back(name_index[not_included_nm]); + } + std::vector bp_count_tree; // for edgewise to make sure we don't double count + for (unsigned int j = 0; j < trees[i]->getInternalNodeCount(); j++) { + std::vector nms = trees[i]->getInternalNode(j)->get_leave_names(); + // skip the root + if (nms.size() == rt_nms.size()) { + continue; + } + // if we are using a cutoff, skip the edge that is below the num + if (cutoff) { + if (trees[i]->getInternalNode(j)->getName().length() < 1) { + continue; + } + char* pEnd; + double td = strtod(trees[i]->getInternalNode(j)->getName().c_str(),&pEnd); + if (td < cutnum) { + continue; + } + } + // end using cutoffs + std::vector nms_i; + std::set nms_s; + copy(nms.begin(), nms.end(), inserter(nms_s, nms_s.begin())); + nms_i.reserve(nms.size()); + for (const auto & nm : nms) { + nms_i.push_back(name_index[nm]); + } + sort(nms_i.begin(), nms_i.end()); + // get the other side of the bipart + std::vector nms_i2; + std::vector nms_s2(rt_nms.size()); + std::vector::iterator it; + it = std::set_difference(rt_nms_set.begin(), rt_nms_set.end(), nms_s.begin(), + nms_s.end(), nms_s2.begin()); + nms_s2.resize(static_cast(it-nms_s2.begin())); + nms_i2.reserve(nms_s2.size()); + for (const auto & k : nms_s2) { + nms_i2.push_back(name_index[k]); + } + sort(nms_i2.begin(), nms_i2.end()); + // check to see if the bipart is new + if (!edgewisealltaxa) { + // this is nodewise and we dont' assume we have all the taxa + if (static_cast(std::count(biparts.begin(), biparts.end(), nms_i)) == 0 && + static_cast(std::count(biparts2.begin(), biparts2.end(), nms_i2)) == 0) { + biparts.push_back(nms_i); + biparts2.push_back(nms_i2); + not_included.push_back(not_included_i); + bp_count.push_back(1); + } else { + // get index + auto index = static_cast(find(biparts.begin(), + biparts.end(), nms_i)-biparts.begin()); + bp_count[index] += 1; + } + // do the otherside for unrooted + if (unrooted && trees[i]->getInternalNode(j)->getParent() == trees[i]->getRoot()) { + if (static_cast(std::count(biparts.begin(), biparts.end(), nms_i2)) == 0 && + static_cast(std::count(biparts2.begin(), biparts2.end(), nms_i)) == 0) { + biparts.push_back(nms_i2); + biparts2.push_back(nms_i); + not_included.push_back(not_included_i); + bp_count.push_back(1); + } else { + auto index = static_cast(find(biparts.begin(), + biparts.end(), nms_i2)-biparts.begin()); + bp_count[index] += 1; + } + } + } else { + // this is edgewise and we assume all the taxa + // this is for reporting a b | c d instead of a b and c d separately + + // first check to make sure that both sides at least have two taxa + if (nms_i.size() < 2 || nms_i2.size() < 2) { + continue; + } + if (static_cast(std::count(biparts.begin(), biparts.end(), nms_i)) == 0 && + static_cast(std::count(biparts.begin(), biparts.end(), nms_i2)) == 0) { + biparts.push_back(nms_i); + biparts2.push_back(nms_i2); + not_included.push_back(not_included_i); + bp_count.push_back(1); + bp_count_tree.push_back(static_cast(bp_count.size())-1); + } else { + // get index + size_t index; + if (static_cast(std::count(biparts.begin(), biparts.end(), nms_i)) == 1) { + index = static_cast(find(biparts.begin(), + biparts.end(), nms_i)-biparts.begin()); + } else { + index = static_cast(find(biparts.begin(), + biparts.end(), nms_i2)-biparts.begin()); + } + // need to accommodate that it can be reflected in the edgewise case + if (static_cast(std::count(bp_count_tree.begin(), bp_count_tree.end(), index)) == 0) { + bp_count[index] += 1; + bp_count_tree.push_back(static_cast(index)); + } + } + + } + } + } + if (!suppress) { + (*poos) << numtrees << " trees " << std::endl; + (*poos) << biparts.size() << " unique clades found" << std::endl; + // calculate the logical matrix of biparts for each tree + // the matrix will have each i as a tree and + // each matrix[i] will represent a 1 if the tree has the bipart and 0 if not + int colsize = static_cast(biparts.size()) + 1; + if (edgewisealltaxa) { + colsize--; // no root for edgewise + } + std::vector cols(static_cast(colsize), 0); + std::vector > matrix(numtrees, cols); + for (unsigned long i = 0; i < numtrees; i++) { + bool unrooted = false; + unsigned int numch = trees[i]->getRoot()->getChildCount(); + if (numch > 2u) { + unrooted = true; + } + for (unsigned int j = 0; j < trees[i]->getInternalNodeCount(); j++) { + // if we are using a cutoff, skip the edge that is below the num + if (cutoff) { + if (trees[i]->getInternalNode(j)->getName().length() < 1) { + continue; + } + char* pEnd; + double td = strtod(trees[i]->getInternalNode(j)->getName().c_str(),&pEnd); + if (td < cutnum) { + continue; + } + } + // end using cutoffs + // should this do the root? I don't think so + if (edgewisealltaxa && trees[i]->getInternalNode(j) == trees[i]->getRoot()) { + continue; + } + + std::vector nms = trees[i]->getInternalNode(j)->get_leave_names(); + std::vector nms_i; + nms_i.reserve(nms.size()); + for (const auto & nm : nms) { + nms_i.push_back(name_index[nm]); + } + sort(nms_i.begin(), nms_i.end()); + size_t index; + if (edgewisealltaxa) { + if (static_cast(std::count(biparts.begin(), biparts.end(), nms_i)) == 1) { + index = static_cast(find(biparts.begin(), biparts.end(), + nms_i)-biparts.begin()); + } else { + index = static_cast(find(biparts2.begin(), biparts2.end(), + nms_i)-biparts2.begin()); + } + } else { + index = static_cast(find(biparts.begin(), biparts.end(), + nms_i) - biparts.begin()); + } + matrix[i][index] = 1; + if (unrooted && trees[i]->getInternalNode(j)->getParent() == trees[i]->getRoot()) { + std::vector rt_nms = trees[i]->getRoot()->get_leave_names(); + std::set rt_nms_set; + copy(rt_nms.begin(), rt_nms.end(), inserter(rt_nms_set, rt_nms_set.begin())); + std::set nms_s; + copy(nms.begin(), nms.end(), inserter(nms_s, nms_s.begin())); + nms_i.clear(); + std::vector nms_i2; + std::vector nms_s2(rt_nms.size()); + std::vector::iterator it; + it = std::set_difference(rt_nms_set.begin(), rt_nms_set.end(), nms_s.begin(), + nms_s.end(), nms_s2.begin()); + nms_s2.resize(static_cast(it-nms_s2.begin())); + nms_i2.reserve(nms_s2.size()); + for (const auto & k : nms_s2) { + nms_i2.push_back(name_index[k]); + } + for (const auto & ii : nms_s) { + nms_i.push_back(name_index[ii]); + } + sort(nms_i2.begin(), nms_i2.end()); + sort(nms_i.begin(), nms_i.end()); + int x = static_cast(find(biparts.begin(), biparts.end(), nms_i2) - biparts.begin()); + if (x == static_cast(matrix[i].size())) { + x = static_cast(find(biparts.begin(), biparts.end(), nms_i)-biparts.begin()); + } + matrix[i][static_cast(x)] = 1; + } + } + } + // print the unique trees + if (uniquetree) { + std::cout << "====UNIQUE TREES====" << std::endl; + std::set un_trees; + for (size_t i = 0; i < static_cast(numtrees); i++) { + std::string sv = get_string_vector(matrix[i]); + if (un_trees.count(sv) != 0) { + std::cout << trees[i]->getRoot()->getNewick(false) << ";" << std::endl; + un_trees.insert(sv); + } + } + std::cout << "==END UNIQUE TREES==" << std::endl; + exit(0); + } + + // constructing the logical matrix + // the logical matrix has each row as a bipart1 and each col as a name + // there is a one if the bipart has the name + // need to add the -1 for bipart2 + std::vector cols2(names.size(), 0); + std::vector > logical_matrix(biparts.size(), cols2); + for (unsigned int i = 0; i < biparts.size(); i++) { + for (unsigned int j = 0; j < names.size(); j++) { + if (std::count(biparts[i].begin(), biparts[i].end(), name_index[names[j]]) != 0) { + logical_matrix[i][j] = 1; + } + } + //std::cout << get_string_vector(logical_matrix[i]) << std::endl; + } + + double smallest_proportion = 0.0; + double TSCA = 0; + // get the conflicting bipartitions + // initialize results vectors + for (unsigned int i = 0; i < biparts.size(); i++) { + if (firsttree) { + if (matrix[0][i] != 1) { + continue; + } + } + auto sumc = static_cast(sum_matrix_col(matrix, i)); + if (sumc != trees.size() && sumc > (smallest_proportion*trees.size())) { + std::vector nms; + for (int k : biparts[i]) { + nms.push_back(name_st_index[biparts[i][static_cast(k)]]); + } + (*poos) << "CLADE: " << get_string_vector(nms); + if (edgewisealltaxa) { + std::vector nms_o; + for (int k : biparts2[i]) { + nms_o.push_back(name_st_index[biparts2[i][static_cast(k)]]); + } + (*poos) << "| " << get_string_vector(nms_o); + } + double totalcount = bp_count[i]; + std::vector conflict_nums; + conflict_nums.push_back(bp_count[i]); + if (verbose) { + (*poos) << "\n\tCONFLICTS:" << std::endl; + } + for (unsigned int j = 0; j < biparts.size(); j++) { + auto sumc2 = static_cast(sum_matrix_col(matrix, j)); + if (i != j && sumc2 != trees.size() && sumc2 > (smallest_proportion*trees.size())) { + bool logitest = test_logical(logical_matrix[i], logical_matrix[j], edgewisealltaxa); + if (logitest) { + std::vector nms2; + for (int k : biparts[j]) { + nms2.push_back(name_st_index[biparts[j][static_cast(k)]]); + } + totalcount += bp_count[j]; + conflict_nums.push_back(bp_count[j]); + if (verbose) { + (*poos) << " \t " << get_string_vector(nms2); + if (edgewisealltaxa) { + std::vector nms_o; + for (int k : biparts2[j]) { + nms_o.push_back(name_st_index[biparts2[j][static_cast(k)]]); + } + (*poos) << "| " << get_string_vector(nms_o); + } + (*poos) << "\tCOUNT:\t" << bp_count[j] << "\tTREEFREQ:\t" + << bp_count[j]/trees.size() << std::endl; + } + } + } + } + // calculate ICA + double sign = 1; + for (unsigned int j = 0; j < conflict_nums.size(); j++) { + conflict_nums[j] /= totalcount; + if (conflict_nums[j] > conflict_nums[0]) { + sign = -1; + } + } + double ICA = 1; // same as logn(conflict_nums.size(), conflict_nums.size()); + for (unsigned int j = 0; j < conflict_nums.size(); j++) { + ICA += (conflict_nums[j] * logn(conflict_nums[j], conflict_nums.size())); + } + TSCA += ICA; + ICA *= sign; + (*poos) << "\tFREQ:\t" << conflict_nums[0] << "\tICA:\t" << ICA << "\tCOUNT:\t" + << bp_count[i] << "\tTREEFREQ:\t" << bp_count[i]/trees.size() << std::endl; + if (verbose) { + (*poos) << "\tTREES:\t"; + for (unsigned int j = 0; j < matrix.size(); j++) { + if (matrix[j][i] == 1) { + (*poos) << j << " "; + } + } + (*poos) << std::endl; + } + } else if (sumc == trees.size()) { + std::vector nms; + nms.reserve(biparts[i].size()); + for (int k : biparts[i]) { + nms.push_back(name_st_index[k]); + } + (*poos) << "CLADE: " << get_string_vector(nms); + if (edgewisealltaxa) { + std::vector nms_o; + for (int k : biparts2[i]) { + nms_o.push_back(name_st_index[biparts2[i][static_cast(k)]]); + } + (*poos) << "| " << get_string_vector(nms_o); + } + (*poos) << "\tFREQ:\t1.\tICA:\t1.\tCOUNT:\t" << bp_count[i] << "\tTREEFREQ:\t1." << std::endl; + TSCA += 1; + if (verbose) { + (*poos) << "\tTREES:\t"; + for (unsigned int j = 0; j < matrix.size(); j++) { + if (matrix[j][i] == 1) { + (*poos) << j << " "; + } + } + (*poos) << std::endl; + } + } + } + (*poos) << "TSCA: " << TSCA << std::endl; + } // end suppress if + if (mapfileset) { + std::string mot(mtreef); + mot = mot +".pxbpmapped.tre"; + auto * mofstr = new std::ofstream(mot); + std::ostream * mpoos = mofstr; + for (unsigned int i = 0; i < maptree->getInternalNodeCount(); i++) { + if (maptree->getInternalNode(i) == maptree->getRoot()) { + continue; + } + std::vector nms = maptree->getInternalNode(i)->get_leave_names(); + std::vector nms_i; + nms_i.reserve(nms.size()); + for (const auto & nm : nms) { + nms_i.push_back(name_index[nm]); + } + sort(nms_i.begin(), nms_i.end()); + size_t index; + bool found = false; + if (edgewisealltaxa) { + if (static_cast(std::count(biparts.begin(), biparts.end(), nms_i)) == 1) { + index = static_cast(find(biparts.begin(), biparts.end(), + nms_i)-biparts.begin()); + found = true; + } else { + index = static_cast(find(biparts2.begin(), biparts2.end(), + nms_i)-biparts2.begin()); + found = true; + } + } else { + index = static_cast(find(biparts.begin(), biparts.end(), + nms_i) - biparts.begin()); + found = true; + } + if (!found) { + maptree->getInternalNode(i)->setName("0.0"); + } else { + maptree->getInternalNode(i)->setName(std::to_string(bp_count[index]/trees.size())); + } + } + (*mpoos) << maptree->getRoot()->getNewick(true) << ";" << std::endl; + mofstr->close(); + delete mpoos; + } + + // shut things down + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_cat.cpp b/src/main_cat.cpp new file mode 100644 index 0000000..e113759 --- /dev/null +++ b/src/main_cat.cpp @@ -0,0 +1,197 @@ +#include +#include +#include +#include +#include +#include + +#include "sequence.h" +#include "seq_reader.h" +#include "utils.h" +#include "concat.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Sequence file concatenation." << std::endl; + std::cout << "Can use wildcards e.g.:" << std::endl; + std::cout << " pxcat -s *.phy -o my_cat_file.fa" << std::endl; + std::cout << "However, if the argument list is too long (shell limit), put filenames in a file:" << std::endl; + std::cout << " for x in *.phy" << std::endl; + std::cout << " do echo $x >> flist.txt" << std::endl; + std::cout << " done" << std::endl; + std::cout << "and call using the -f option:" << std::endl; + std::cout << " pxcat -f flist.txt -o my_cat_file.fa" << std::endl; + std::cout << "This will take fasta, fastq, phylip, and nexus sequence formats." << std::endl; + std::cout << "Individual files may be of different formats." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxcat [OPTIONS]... FILES" << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -s, --seqf=FILE list of input sequence files (space delimited)" << std::endl; + std::cout << " -f, --flistFILE file listing input files (one per line)" << std::endl; + std::cout << " -p, --partf=FILE output partition file, none otherwise" << std::endl; + std::cout << " -u, --uppercase export characters in uppercase" << std::endl; + std::cout << " -o, --outf=FILE output sequence file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxcat 1.3\n"; + vl += "Copyright (C) 2015-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph F. Walker, Joseph W. Brown, Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"flist", required_argument, nullptr, 'f'}, + {"outf", required_argument, nullptr, 'o'}, + {"partf", required_argument, nullptr, 'p'}, + {"uppercase", no_argument, nullptr, 'u'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool fileset = false; + bool logparts = false; + bool toupcase = false; + std::vector inputFiles; + char * outf = nullptr; + std::string partf; + std::string listf; + + while (true) { + int oi = -1; + int curind; + int c = getopt_long(argc, argv, "s:f:o:p:uhVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + curind = optind - 1; + while (curind < argc) { + std::string temp = strdup(argv[curind]); + curind++; + if (temp[0] != '-') { + std::ifstream infile(temp.c_str()); + if (infile.good()) { // check that file exists + inputFiles.push_back(temp); + infile.close(); + } else { + std::cerr << "Error: cannot find input file '" << temp << "'. Exiting." << std::endl; + exit(0); + } + } else { + optind = curind - 1; + break; + } + } + break; + case 'f': + fileset = true; + listf = strdup(optarg); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'p': + logparts = true; + partf = strdup(optarg); + break; + case 'u': + toupcase = true; + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (!fileset) { + std::cerr << "Error: must specify 1 or more files to concatenate. Exiting." << std::endl; + exit(0); + } + if (!listf.empty()) { + std::string line; + std::ifstream ifs(listf.c_str()); + while (getline (ifs, line)) { + if (!line.empty()) { + inputFiles.push_back(line); + } + } + ifs.close(); + } + + std::ostream * poos = nullptr; + std::ofstream * ofstr = nullptr; + + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + SequenceConcatenater result(toupcase); + bool first = true; + + for (auto & inputFile : inputFiles) { + SequenceConcatenater curr(inputFile, toupcase); + if (!first) { + result.concatenate(curr); + } else { + result = curr; + first = false; + } + } + + // write sequences + for (unsigned int i = 0; i < result.get_num_taxa(); i++) { + Sequence curr = result.get_sequence(i); + (*poos) << ">" << curr.get_id() << std::endl; + (*poos) << curr.get_sequence() << std::endl; + } + + if (outfileset) { + ofstr->close(); + delete poos; + } + + // log partition information. currently only RAxML-style. + if (logparts) { + result.write_partition_information(inputFiles, partf); + } + + return EXIT_SUCCESS; +} diff --git a/src/main_clsq.cpp b/src/main_clsq.cpp new file mode 100644 index 0000000..3991c7f --- /dev/null +++ b/src/main_clsq.cpp @@ -0,0 +1,179 @@ +#include +#include +#include +#include +#include + +#include "clean_seq.h" +#include "utils.h" +#include "sequence.h" +#include "seq_reader.h" +#include "log.h" +#include "citations.h" + + +// TODO: throw out stop_codons: "TAG", "TAA", "TGA" + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Clean alignments by removing positions/taxa with too much ambiguous data." << std::endl; + std::cout << "This will take fasta, fastq, phylip, and nexus formats from a file or STDIN." << std::endl; + std::cout << "Results are written in fasta format." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxclsq [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -s, --seqf=FILE input sequence file, STDIN otherwise" << std::endl; + std::cout << " -p, --prop=DOUBLE proportion required to be present, default=0.5" << std::endl; + std::cout << " -t, --taxa consider missing data per taxon (default: per site)" << std::endl; + std::cout << " -c, --codon examine sequences by codon rather than site" << std::endl; + std::cout << " - requires all sequences be in frame and of correct length" << std::endl; + std::cout << " -i, --info report counts of missing data and exit" << std::endl; + std::cout << " - combine with -t to get report by taxon (rather than site)" << std::endl; + std::cout << " - combine with -c to use codons as units" << std::endl; + std::cout << " -v, --verbose more verbose output (i.e. if entire seqs are removed)" << std::endl; + std::cout << " -o, --outf=FILE output fasta file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxclsq 1.3\n"; + vl += "Copyright (C) 2015-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph F. Walker, Joseph W. Brown, Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"outf", required_argument, nullptr, 'o'}, + {"prop", required_argument, nullptr, 'p'}, + {"taxa", required_argument, nullptr, 't'}, + {"codon", required_argument, nullptr, 'c'}, + {"info", required_argument, nullptr, 'i'}, + {"verbose", no_argument, nullptr, 'v'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool outfileset = false; + char * seqf = nullptr; + char * outf = nullptr; + double prop_required = 0.5; + bool verbose = false; + bool by_taxon = false; + bool by_codon = false; + bool count_only = false; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:o:p:atcivhVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'p': + prop_required = string_to_double(optarg, "-p"); + if (prop_required > 1.0 || prop_required < 0.0) { + std::cerr << "Error: proportion of required data present (-p) must be 0 <= p <= 1.0. Exiting." + << std::endl; + exit(0); + } + break; + case 't': + by_taxon = true; + break; + case 'c': + by_codon = true; + break; + case 'i': + count_only = true; + break; + case 'v': + verbose = true; + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + std::ostream * poos = nullptr; + std::ofstream * ofstr = nullptr; + std::istream * pios = nullptr; + std::ifstream * fstr = nullptr; + + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + + SequenceCleaner SC(pios, prop_required, by_taxon, by_codon, count_only, verbose); + + // write sequences. currently only fasta format. + if (!count_only) { + SC.write_seqs(poos); + } else { + SC.write_stats(poos); + } + + if (outfileset) { + ofstr->close(); + delete poos; + } + if (fileset) { + fstr->close(); + delete pios; + } + + return EXIT_SUCCESS; +} diff --git a/src/main_cltr.cpp b/src/main_cltr.cpp new file mode 100644 index 0000000..5dc533e --- /dev/null +++ b/src/main_cltr.cpp @@ -0,0 +1,201 @@ +#include +#include +#include +#include +#include +#include +#include +#include + +#include "tree_reader.h" +#include "tree.h" +#include "tree_utils.h" +#include "utils.h" +#include "clean_tree.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "General tree cleaner." << std::endl; + std::cout << "Removes annotations (node labels), 'knuckles' (2-degree nodes), and" << std::endl; + std::cout << "root edges to generate a 'vanilla' newick representation." << std::endl; + std::cout << "By default removes all properties. Alternatively choose 1 property." << std::endl; + std::cout << "This will take a newick- or nexus-formatted tree from a file or STDIN." << std::endl; + std::cout << "Output is written in newick format." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxcltr [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input treefile, STDIN otherwise" << std::endl; + std::cout << " -r, --root remove root edge (if present)" << std::endl; + std::cout << " -l, --labels remove internal node labels" << std::endl; + std::cout << " -k, --knuckles remove 2-degree internal nodes" << std::endl; + std::cout << " -o, --outf=FILE output file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxcltr 1.3\n"; + vl += "Copyright (C) 2017-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"root", no_argument, nullptr, 'r'}, + {"labels", no_argument, nullptr, 'l'}, + {"knuckles", no_argument, nullptr, 'k'}, + {"outf", required_argument, nullptr, 'o'}, + {"showd", no_argument, nullptr, 's'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool tfileset = false; + bool optionsset = false; + bool removerootedge = false; + bool removelabels = false; + bool removeknuckles = false; + + // need option to write nexus + + char * treef = nullptr; + char * outf = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:rlko:x:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + tfileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'r': + removerootedge = true; + optionsset = true; + break; + case 'l': + removelabels = true; + optionsset = true; + break; + case 'k': + removeknuckles = true; + optionsset = true; + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (tfileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + // if no options set, do all by default + if (!optionsset) { + removerootedge = true; + removelabels = true; + removeknuckles = true; } + /* + if ((removerootedge + removelabels) > 1) { + std::cerr << "Error: specify 1 property only (or leave blank to clean all). Exiting." << std::endl; + exit(0); + } + */ + std::istream* pios = nullptr; + std::ostream* poos = nullptr; + std::ifstream* fstr = nullptr; + std::ofstream* ofstr = nullptr; + + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + if (tfileset) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + + bool going = true; + if (ft == 1) { + while (going) { + Tree * tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (tree != nullptr) { + CleanTree ct(tree, removerootedge, removelabels, removeknuckles); + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } else if (ft == 0) { // Nexus. need to worry about possible translation tables + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + while (going) { + Tree * tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (tree != nullptr) { + CleanTree ct(tree, removerootedge, removelabels, removeknuckles); + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } + + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_colt.cpp b/src/main_colt.cpp new file mode 100644 index 0000000..55a6aee --- /dev/null +++ b/src/main_colt.cpp @@ -0,0 +1,187 @@ +#include +#include +#include +#include +#include +#include +#include + +#include "utils.h" +#include "tree_reader.h" +#include "tree_utils.h" +#include "collapse_tree.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Collapse edges with support below some threshold." << std::endl; + std::cout << "If annotated Nexus, may require passing in the support identifier (-s)." << std::endl; + std::cout << "This will take a newick- or nexus-formatted tree from a file or STDIN." << std::endl; + std::cout << "Output is written in newick format." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxcolt [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input tree file, STDIN otherwise" << std::endl; + std::cout << " -l, --limit=DOUBLE minimum support threshold as proportion (default = 0.5)" << std::endl; +// Welp this was forgotten :( comment out until actually implemented +// std::cout << " -s, --sup=STRING string identifying support values (if default fails)!" << std::endl; + std::cout << " -o, --outf=FILE output file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxcolt 1.3\n"; + vl += "Copyright (C) 2018-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"limit", required_argument, nullptr, 'l'}, + {"sup", required_argument, nullptr, 's'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool tfileset = false; + bool supset = false; + + double threshold = 0.5; + std::string supstring; + + char * outf = nullptr; + char * treef = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:l:s:o:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + tfileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'l': + threshold = string_to_double(optarg, "-l"); + if (threshold <= 0 || threshold > 1) { + std::cerr << "Error: specify proportional threshold: (0,1). Exiting." << std::endl; + exit(0); + } + break; + case 's': + supset = true; + supstring = strdup(optarg); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (tfileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (tfileset) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + Collapser tc(threshold); + + if (supset) { + tc.set_sup_string(supstring); + } + + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + bool going = true; + if (ft == 1) { + while (going) { + Tree * tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (going) { + tc.collapse_edges(tree); + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } else if (ft == 0) { // Nexus. need to worry about possible translation tables + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + while (going) { + Tree * tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (tree != nullptr) { + // this currently only works with the vanilla-est of trees + tc.collapse_edges(tree); + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } + + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_comp.cpp b/src/main_comp.cpp new file mode 100644 index 0000000..af76bd4 --- /dev/null +++ b/src/main_comp.cpp @@ -0,0 +1,137 @@ +#include +#include +#include +#include +#include + +#include "utils.h" +#include "sequence.h" +#include "seq_reader.h" +#include "comp_test.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Sequence compositional homogeneity test." << std::endl; + std::cout << "Chi-square test for equivalent character state counts across lineages." << std::endl; + std::cout << "This will take fasta, phylip, and nexus formats from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxcomp [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -s, --seqf=FILE input seq file, STDIN otherwise" << std::endl; + std::cout << " -o, --outf=FILE output stats file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} +std::string get_version_line () { + std::string vl = "pxcomp 1.3\n"; + vl += "Copyright (C) 2016-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool fileset = false; + char * outf = nullptr; + char * seqf = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:o:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + + // hmm does this require a file atm?!? + + if (fileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + std::ostream * poos = nullptr; + std::ofstream * ofstr = nullptr; + std::ifstream * fstr = nullptr; + std::istream * pios = nullptr; + + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + CompTest ct(pios, poos); + ct.print_results(); + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + + return EXIT_SUCCESS; +} + diff --git a/src/main_consq.cpp b/src/main_consq.cpp new file mode 100644 index 0000000..f463004 --- /dev/null +++ b/src/main_consq.cpp @@ -0,0 +1,138 @@ +#include +#include +#include +#include +#include +#include + +#include "seq_reader.h" +#include "sequence.h" +#include "seq_utils.h" +#include "utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Compute a consensus sequence from an alignment." << std::endl; + std::cout << "This will take fasta, phylip, and nexus formats from a file or STDIN." << std::endl; + std::cout << "Results are written in fasta format." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxconsq [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -s, --seqf=FILE input sequence file, STDIN otherwise" << std::endl; + std::cout << " -o, --outf=FILE output sequence file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxconsq 1.3\n"; + vl += "Copyright (C) 2013-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim), Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool outfileset = false; + char * seqf = nullptr; + char * outf = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:o:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + std::string alphaName; + std::vector seqs = ingest_alignment(pios, alphaName); + + std::string rets = consensus_seq(seqs, alphaName); + + (*poos) << ">consensus" << std::endl; + (*poos) << rets << std::endl; + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_contrates.cpp b/src/main_contrates.cpp new file mode 100644 index 0000000..00ee2d9 --- /dev/null +++ b/src/main_contrates.cpp @@ -0,0 +1,271 @@ +#include +#include +#include +#include +#include +#include +#include + +#include "string_node_object.h" +#include "utils.h" +#include "sequence.h" +#include "seq_reader.h" +#include "tree_reader.h" +#include "tree.h" +#include "tree_utils.h" +#include "cont_models.h" +#include "optimize_cont_models_nlopt.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Continuous character rate estimation with Brownian and OU." << std::endl; + std::cout << "This will take fasta, phylip, and nexus formats from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxcontrates [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -c, --charf=FILE input character file, STDIN otherwise" << std::endl; + std::cout << " -t, --treef=FILE input tree file, STDIN otherwise" << std::endl; + std::cout << " -a, --analysis=NUM analysis type (0=anc[DEFAULT], 1=ratetest)" << std::endl; + std::cout << " -o, --outf=FILE output sequence file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxcontrates 1.3\n"; + vl += "Copyright (C) 2013-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"char", required_argument, nullptr, 'c'}, + {"tree", required_argument, nullptr, 't'}, + {"outf", required_argument, nullptr, 'o'}, + {"analysis", required_argument, nullptr, 'a'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool cfileset = false; + bool tfileset = false; + bool outfileset = false; + + char * treef = nullptr; + char * charf = nullptr; + char * outf = nullptr; + int analysis = 0; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "c:t:o:a:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 'c': + cfileset = true; + charf = strdup(optarg); + check_file_exists(charf); + break; + case 't': + tfileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'a': + if (optarg[0] == '1') { + analysis = 1; + } + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + std::istream * pios = nullptr; + std::istream * poos = nullptr; + std::ifstream * cfstr = nullptr; + std::ifstream * tfstr = nullptr; + + std::ostream * poouts = nullptr; + std::ofstream * ofstr = nullptr; + + if (tfileset) { + tfstr = new std::ifstream(treef); + poos = tfstr; + } else { + poos = &std::cin; + } + + if (cfileset) { + cfstr = new std::ifstream(charf); + pios = cfstr; + } else { + std::cerr << "Error: you have to set a character file. "; + std::cerr << "Only a tree file can be read in through the stream. Exiting." << std::endl; + exit(1); + } + + if (outfileset) { + ofstr = new std::ofstream(outf); + poouts = ofstr; + } else { + poouts = &std::cout; + } + + std::string retstring; + int ft = test_char_filetype_stream(*pios, retstring); + if (ft != 1 && ft != 2) { + std::cerr << "Error: only fasta and phylip (with spaces) supported so far. Exiting." << std::endl; + exit(0); + } + Sequence seq; + std::vector seqs; + std::map seq_map; + int y = 0; + int num_chars = 0; + while (read_next_seq_char_from_stream(*pios, ft, retstring, seq)) { + seqs.push_back(seq); + num_chars = seq.get_num_cont_char(); + seq_map[seq.get_id()] = y; + seq.clear_cont_char(); + y++; + } + if (ft == 2) { + seqs.push_back(seq); + seq_map[seq.get_id()] = y; + seq.clear_cont_char(); + } + + // read trees + TreeReader tr; + std::vector trees; + while (getline_safe(*poos, retstring)) { + if (retstring.empty()) { + continue; + } + trees.push_back(tr.readTree(retstring)); + } + + // conduct analyses for each character + for (int c=0; c < num_chars; c++) { + std::cerr << "character: " << c << std::endl; + if (analysis == 0) { + // std::cout << "Input tree: " << getNewickString(trees[0]) << ";" << std::endl; + if (c == 0) { + (*poouts) << "#nexus" << std::endl << "begin trees;" << std::endl; + } + for (unsigned int x = 0; x < trees.size(); x++) { + for (unsigned int i = 0; i < trees[x]->getExternalNodeCount(); i++) { + std::vector tv(1); + tv[0] = seqs[seq_map[trees[x]->getExternalNode(i)->getName()]].get_cont_char(c); + trees[x]->getExternalNode(i)->assocDoubleVector("val", tv); + } + for (unsigned int i = 0; i < trees[x]->getInternalNodeCount(); i++) { + std::vector tv(1); + tv[0] = 0; + trees[x]->getInternalNode(i)->assocDoubleVector("val", tv); + } + calc_square_change_anc_states(trees[x], 0); // second character dies here + for (unsigned int i = 0; i < trees[x]->getInternalNodeCount(); i++) { + double tv = (*trees[x]->getInternalNode(i)->getDoubleVector("val"))[0]; + trees[x]->getInternalNode(i)->deleteDoubleVector("val"); + std::ostringstream s; + s.precision(9); + s << std::fixed << tv; + StringNodeObject nob(s.str()); + trees[x]->getInternalNode(i)->assocObject("value", nob); + //trees[x]->getInternalNode(i)->setName(s.str()); + } + for (unsigned int i = 0; i < trees[x]->getExternalNodeCount(); i++) { + double tv = (*trees[x]->getExternalNode(i)->getDoubleVector("val"))[0]; + trees[x]->getExternalNode(i)->deleteDoubleVector("val"); + std::ostringstream s; + s.precision(9); + s << std::fixed << tv; + StringNodeObject nob(s.str()); + trees[x]->getExternalNode(i)->assocObject("value", nob); + //s << fixed << trees[x]->getExternalNode(i)->getName() << "[&value=" << tv << "]"; + //trees[x]->getExternalNode(i)->setName(s.str()); + } + (*poouts) << "tree tree" << c << " = "; + (*poouts) << getNewickString(trees[x], static_cast("value")) << std::endl; + } + if (c == (num_chars - 1)) { + (*poouts) << "end;\n" << std::endl; + } + // remove annotations + remove_annotations(trees[0]); + + } else if (analysis == 1) { + mat vcv; + int t_ind = 0; // TODO: do this over trees + int c_ind = c; + calc_vcv(trees[t_ind], vcv); + int n = trees[t_ind]->getExternalNodeCount(); + rowvec x = rowvec(n); + for (int i = 0; i < n; i++) { + x(i) = seqs[seq_map[trees[t_ind]->getExternalNode(i)->getName()]].get_cont_char(c_ind); + } + std::vector res = optimize_single_rate_bm_nlopt(x, vcv, true); + double aic = (2*2)-(2*(-res[2])); + double aicc = aic + ((2*2*(2+1))/(n-2-1)); + std::cout << c << " BM " << " state: " << res[0] << " rate: " << res[1] + << " like: " << -res[2] << " aic: " << aic << " aicc: " << aicc << std::endl; + + std::vector res2 = optimize_single_rate_bm_ou_nlopt(x, vcv); + aic = (2*3)-(2*(-res2[3])); + aicc = aic + ((2*3*(3+1))/(n-3-1)); + std::cout << c << " OU " << " state: " << res2[0] << " rate: " + << res2[1] << " alpha: " << res2[2] << " like: " << -res2[3] + << " aic: " << aic << " aicc: " << aicc << std::endl; + } + } + + if (cfileset) { + cfstr->close(); + delete pios; + } + if (tfileset) { + tfstr->close(); + delete poos; + } + if (outfileset) { + ofstr->close(); + delete poouts; + } + return EXIT_SUCCESS; +} diff --git a/src/main_fqfilt.cpp b/src/main_fqfilt.cpp new file mode 100644 index 0000000..6034c36 --- /dev/null +++ b/src/main_fqfilt.cpp @@ -0,0 +1,150 @@ +#include +#include +#include +#include +#include + +#include "utils.h" +#include "seq_reader.h" +#include "sequence.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Filter fastq files by mean quality." << std::endl; + std::cout << "Data can be read from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxfqfilt [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -m, --mean=VALUE mean value under which seqs are filtered" << std::endl; + std::cout << " -s, --seqf=FILE input sequence file, STDIN otherwise" << std::endl; + std::cout << " -o, --outf=FILE output sequence file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxfqfilt 1.3\n"; + vl += "Copyright (C) 2013-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"mean", required_argument, nullptr, 'm'}, + {"seqf", required_argument, nullptr, 's'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + double meanfilt = 30; + bool fileset = false; + bool outfileset = false; + char * seqf = nullptr; + char * outf = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "m:s:o:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 'm': + meanfilt = string_to_double(optarg, "-m"); + break; + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + Sequence seq; + std::string retstring; + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + int ft = test_seq_filetype_stream(*pios, retstring); + + if (ft != 3) { + std::cerr << "Error: must be fastq input. Exiting." << std::endl; + exit(1); + } + + while (read_next_seq_from_stream(*pios, ft, retstring, seq)) { + double mean = seq.get_qualarr_mean(); + if (mean > meanfilt) { + (*poos) << seq.get_fastq(); + } + } + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_log.cpp b/src/main_log.cpp new file mode 100644 index 0000000..d870619 --- /dev/null +++ b/src/main_log.cpp @@ -0,0 +1,285 @@ +#include +#include +#include +#include +#include +#include +#include + +#include "utils.h" +#include "log_manip.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "MCMC log file manipulator." << std::endl; + std::cout << "Can combine and resample parameters or trees across files." << std::endl; + std::cout << "Log files need not contain the same number of samples." << std::endl; + std::cout << "Input files may be indicated using wildcards e.g. '*.trees'" << std::endl; + std::cout << "Parameter log files are expected to be whitespace delimited." << std::endl; + std::cout << "*NOTE* All values are in terms of number of SAMPLES (NOT generations)." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxlog [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -p, --parmf=FILE input parameter log file(s)" << std::endl; + std::cout << " -t, --treef=FILE input tree log file(s)" << std::endl; + std::cout << " -b, --burnin=INT number of samples to exclude at the beginning of a file" << std::endl; + std::cout << " -n, --thin=INT interval of resampling" << std::endl; + // not yet implemented: +// std::cout << " -r, --rand=INT number of random samples (without replacement)" << std::endl; + std::cout << " -i, --info calculate log file attributes and exit" << std::endl; + std::cout << " -s, --summarize summary statistics of samples (parameter logs only)" << std::endl; + std::cout << " -c, --columns print out column names (parameter logs only)" << std::endl; + std::cout << " -d, --delete=CSL delete parm columns by 1-index sep by commas (NO SPACES!)" << std::endl; + std::cout << " -k, --keep=CSL keep only parm columns by 1-index sep by commas (NO SPACES!)" << std::endl; +// std::cout << " -x, --seed=INT random number seed, clock otherwise" << std::endl; + std::cout << " -v, --verbose make the output more verbose" << std::endl; + std::cout << " -o, --outf=FILE output file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxlog 1.3\n"; + vl += "Copyright (C) 2016-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"parmf", required_argument, nullptr, 'p'}, + {"treef", required_argument, nullptr, 't'}, + {"outf", required_argument, nullptr, 'o'}, + {"burnin", required_argument, nullptr, 'b'}, + {"thin", required_argument, nullptr, 'n'}, + {"rand", required_argument, nullptr, 'r'}, + {"info", no_argument, nullptr, 'i'}, + {"summarize", no_argument, nullptr, 's'}, + {"columns", no_argument, nullptr, 'c'}, + {"delete", required_argument, nullptr, 'd'}, + {"keep", required_argument, nullptr, 'k'}, + {"seed", required_argument, nullptr, 'x'}, + {"verbose", no_argument, nullptr, 'v'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool pfileset = false; + bool tfileset = false; + std::vector input_files; + std::vector col_indices; + + int burnin = 0; + int nthin = 1; + int nrandom = -1; + long int seed = -1; + bool verbose = false; + bool count = false; + bool summarize = false; + bool get_columns = false; + bool delete_columns = false; + bool keep_columns = false; + std::string incolids; + std::string logtype; + char * outf = nullptr; + + while (true) { + int oi = -1; + int curind; + int c = getopt_long(argc, argv, "p:t:o:b:n:r:iscd:k:x:vhVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 'p': + pfileset = true; + curind = optind - 1; + while (curind < argc) { + std::string temp = strdup(argv[curind]); + curind++; + if (temp[0] != '-') { + std::ifstream infile(temp.c_str()); + if (infile.good()) { // check that file exists + input_files.push_back(temp); + infile.close(); + } else { + std::cerr << "Error: cannot find input file '" << temp << "'. Exiting." << std::endl; + exit(0); + } + } else { + optind = curind - 1; + break; + } + } + logtype = "parameter"; + break; + case 't': + tfileset = true; + curind = optind - 1; + while (curind < argc) { + std::string temp = strdup(argv[curind]); + curind++; + if (temp[0] != '-') { + std::ifstream infile(temp.c_str()); + if (infile.good()) { // check that file exists + input_files.push_back(temp); + infile.close(); + } else { + std::cerr << "Error: cannot find input file '" << temp << "'. Exiting." << std::endl; + exit(0); + } + } else { + optind = curind - 1; + break; + } + } + logtype = "tree"; + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'b': + burnin = string_to_int(optarg, "-b"); + if (burnin < 0) { + std::cerr << "Error: burnin must be a positive integer. Exiting." << std::endl; + exit(0); + } + break; + case 'n': + nthin = string_to_int(optarg, "-n"); + if (nthin < 1) { + std::cerr << "Error: nthin must be a >= 1. Exiting." << std::endl; + exit(0); + } + break; + case 'r': + nrandom = string_to_int(optarg, "-r"); + break; + case 'i': + count = true; + break; + case 's': + summarize = true; + break; + case 'c': + get_columns = true; + break; + case 'd': + delete_columns = true; + incolids = strdup(optarg); + parse_comma_list(incolids, col_indices); + sort(col_indices.begin(), col_indices.end()); + break; + case 'k': + keep_columns = true; + incolids = strdup(optarg); + parse_comma_list(incolids, col_indices); + sort(col_indices.begin(), col_indices.end()); + break; + case 'x': + seed = string_to_long_int(optarg, "-x"); + break; + case 'v': + verbose = true; + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + std::ostream * poos = nullptr; + std::ofstream * ofstr = nullptr; + + // not used at the moment: assumed that all input comes from files + //istream * pios = nullptr; + //ifstream * fstr = nullptr; + + if (!tfileset && !pfileset) { + std::cerr << "Error: must specify a tree file or parameter file. Exiting." << std::endl; + exit(0); + } + + if (tfileset && pfileset) { + std::cerr << "Error: set tree file *or* parameter file, not both. Exiting." << std::endl; + exit(0); + } + + // abort if invalid args + if (tfileset) { + if (get_columns || delete_columns || keep_columns) { + std::cerr << "Error: column arguments are not applicable for tree files. Exiting." << std::endl; + exit(0); + } else if (summarize) { + std::cerr << "Error: summary is not applicable for tree files. Exiting." << std::endl; + exit(0); + } + } + + // exit if not 1-indexed (just check first column + if (delete_columns || keep_columns) { + if (col_indices[0] < 1) { + std::cerr << "Warning: column numbers are 1-indexed. Exiting." << std::endl; + exit(0); + } + } + + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + //LogManipulator lm (logtype, input_files, pios, poos); + LogManipulator lm (logtype, input_files, poos, verbose); + + if (count) { + lm.count(); + lm.get_sample_counts(); + } else if (get_columns) { + lm.get_column_names(); + } else if (delete_columns) { + lm.delete_columns(col_indices); + } else if (keep_columns) { + lm.retain_columns(col_indices); + } else if (summarize) { + lm.summarize(burnin, nthin); + } else { + lm.sample(burnin, nthin, nrandom, seed); + } + + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_lssq.cpp b/src/main_lssq.cpp new file mode 100644 index 0000000..bccc962 --- /dev/null +++ b/src/main_lssq.cpp @@ -0,0 +1,211 @@ +#include +#include +#include +#include +#include +#include +#include + +#include "utils.h" +#include "sequence.h" +#include "seq_reader.h" +#include "seq_info.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Print sequence file summary." << std::endl; + std::cout << "By default returns all properties. Alternatively choose 1 property." << std::endl; + std::cout << "This will take fasta, phylip, and nexus formats from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxlssq [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -s, --seqf=FILE input seq file, STDIN otherwise" << std::endl; + std::cout << " -i, --indiv output stats for individual sequences" << std::endl; + std::cout << " -n, --nseq return the number of sequences" << std::endl; + std::cout << " -c, --nchar return the number of characters (only if aligned)" << std::endl; + std::cout << " - for unaligned seqs, use with -i flag" << std::endl; + std::cout << " -l, --labels return all taxon labels (one per line)" << std::endl; + std::cout << " -p, --prot force interpret as protein (if inference fails)" << std::endl; + std::cout << " -a, --aligned return whether sequences are aligned (same length)" << std::endl; + std::cout << " -f, --freqs return character state frequencies" << std::endl; + std::cout << " -m, --missing return the proportion of missing (-,?) characters" << std::endl; + std::cout << " -o, --outf=FILE output stats file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxlssq 1.3\n"; + vl += "Copyright (C) 2016-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph F. Walker, Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"outf", required_argument, nullptr, 'o'}, + {"indiv", no_argument, nullptr, 'i'}, + {"nseq", no_argument, nullptr, 'n'}, + {"nchar", no_argument, nullptr, 'c'}, + {"labels", no_argument, nullptr, 'l'}, + {"prot", no_argument, nullptr, 'p'}, + {"aligned", no_argument, nullptr, 'a'}, + {"freqs", no_argument, nullptr, 'f'}, + {"missing", no_argument, nullptr, 'm'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool fileset = false; + bool indiv = false; + bool force_protein = false; // i.e. if inference fails + bool optionsset = false; // is true, do not return all properties + int propcount = 0; //count how many properties are requested + bool get_labels = false; + bool check_aligned = false; + bool get_nseq = false; + bool get_nchar = false; + bool get_freqs = false; + bool get_missing = false; + char * outf = nullptr; + char * seqf = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:o:inclpafmhVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'i': + indiv = true; + break; + case 'n': + get_nseq = true; + optionsset = true; + propcount++; + break; + case 'c': + get_nchar = true; + optionsset = true; + propcount++; + break; + case 'l': + get_labels = true; + optionsset = true; + propcount++; + break; + case 'p': + force_protein = true; + break; + case 'a': + check_aligned = true; + optionsset = true; + propcount++; + break; + case 'f': + get_freqs = true; + optionsset = true; + propcount++; + break; + case 'm': + get_missing = true; + optionsset = true; + propcount++; + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + std::ostream * poos = nullptr; + std::ofstream * ofstr = nullptr; + std::ifstream * fstr = nullptr; + std::istream * pios = nullptr; + + if (propcount > 1) { + std::cerr << "Error: specify 1 property only (or leave blank to show all properties). Exiting." << std::endl; + exit(0); + } + + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + SeqInfo ls_Seq(pios, poos, indiv, force_protein); + if (optionsset) { + // get single property + ls_Seq.get_property (get_labels, check_aligned, get_nseq, + get_freqs, get_nchar, get_missing); + } else { + // the original behaviour + ls_Seq.summarize(); + } + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + + return EXIT_SUCCESS; +} + diff --git a/src/main_lstr.cpp b/src/main_lstr.cpp new file mode 100644 index 0000000..70021a0 --- /dev/null +++ b/src/main_lstr.cpp @@ -0,0 +1,244 @@ +#include +#include +#include +#include +#include +#include +#include + +#include "tree_info.h" +#include "tree_reader.h" +#include "tree.h" +#include "utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Print tree summary." << std::endl; + std::cout << "By default returns all properties. Alternatively choose 1 property." << std::endl; + std::cout << "This will take a newick- or nexus-formatted tree from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxlstr [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input tree file, STDIN otherwise" << std::endl; + std::cout << " -r, --rooted return whether the tree is rooted" << std::endl; + std::cout << " -a, --age return the height of root (must be rooted and ultrametric)" << std::endl; + std::cout << " -n, --ntips return the number of terminals" << std::endl; + std::cout << " -u, --ultrametric return whether tree is ultrametric" << std::endl; + std::cout << " -b, --binary return whether tree is binary" << std::endl; + std::cout << " -l, --length return the length of the tree" << std::endl; + std::cout << " -i, --tiplabels return all tip labels (one per line)" << std::endl; + std::cout << " -v, --rtvar return root-to-tip variance" << std::endl; + std::cout << " -o, --outf=FILE output tree stats file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxlstr 1.3\n"; + vl += "Copyright (C) 2016-2021 FePhyFoFum\n"; + vl += "License: GPLv3\n"; + vl += "Written by Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"rooted", no_argument, nullptr, 'r'}, + {"age", no_argument, nullptr, 'a'}, + {"ntips", no_argument, nullptr, 'n'}, + {"ultrametric", no_argument, nullptr, 'u'}, + {"binary", no_argument, nullptr, 'b'}, + {"length", no_argument, nullptr, 'l'}, + {"tiplabels", no_argument, nullptr, 'i'}, + {"rtvar", no_argument, nullptr, 'v'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool fileset = false; + bool optionsset = false; // if true, do not return all properties + int propcount = 0; // count how many properties are requested + bool ultracheck = false; + bool binarycheck = false; + bool lengthcheck = false; + bool agecheck = false; + bool rootedcheck = false; + bool ntipcheck = false; + bool namecheck = false; + bool rtvarcheck = false; + char * outf = nullptr; + char * treef = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:vranublio:x:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + fileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'r': + rootedcheck = true; + optionsset = true; + propcount++; + break; + case 'a': + agecheck = true; + optionsset = true; + propcount++; + break; + case 'n': + ntipcheck = true; + optionsset = true; + propcount++; + break; + case 'u': + ultracheck = true; + optionsset = true; + propcount++; + break; + case 'b': + binarycheck = true; + optionsset = true; + propcount++; + break; + case 'l': + lengthcheck = true; + optionsset = true; + propcount++; + break; + case 'i': + namecheck = true; + optionsset = true; + propcount++; + break; + case 'v': + rtvarcheck = true; + optionsset = true; + propcount++; + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + if (propcount > 1) { + std::cerr << "Error: specify 1 property only (or leave blank to show all properties). Exiting." << std::endl; + exit(0); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + if (fileset) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + + int treeCounter = 0; + bool going = true; + if (ft == 1) { + while (going) { + Tree * tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (tree != nullptr) { + if (!optionsset) { + (*poos) << "tree #: " << treeCounter << std::endl; + TreeInfo ti(tree); + ti.get_stats(poos); + delete tree; + treeCounter++; + } else { + // only a single property + TreeInfo ti(tree, ultracheck, binarycheck, agecheck, rootedcheck, + ntipcheck, lengthcheck, namecheck, rtvarcheck, poos); + } + } + } + } else if (ft == 0) { // Nexus. need to worry about possible translation tables + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + while (going) { + Tree * tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (tree != nullptr) { + if (!optionsset) { + (*poos) << "tree #: " << treeCounter << std::endl; + TreeInfo ti(tree); + ti.get_stats(poos); + delete tree; + treeCounter++; + } else { + // only a single property + TreeInfo ti(tree, ultracheck, binarycheck, agecheck, rootedcheck, + ntipcheck, lengthcheck, namecheck, rtvarcheck, poos); + } + } + } + } + + return EXIT_SUCCESS; +} diff --git a/src/main_mono.cpp b/src/main_mono.cpp new file mode 100644 index 0000000..f6ff22b --- /dev/null +++ b/src/main_mono.cpp @@ -0,0 +1,272 @@ +#include +#include +#include +#include +#include +#include +#include +#include + +#include "tree.h" +#include "tree_reader.h" +#include "utils.h" +#include "tree_utils.h" +#include "log.h" +#include "aa2cdn.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Monophyly checker." << std::endl; + std::cout << "This will take a newick- or nexus-formatted tree from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxmono [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input tree file, STDIN otherwise" << std::endl; + std::cout << " -n, --names=CSL names separated by commas (NO SPACES!)" << std::endl; + std::cout << " -f, --namesf=FILE names in a file (each on a line)" << std::endl; + std::cout << " -c, --comp take the complement (i.e. check monophyly of taxa not in list)" << std::endl; + std::cout << " -i, --ignore ignore missing (default: exit if names are not in the tree)" << std::endl; + std::cout << " -o, --outf=FILE output tree file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxmono 1.3\n"; + vl += "Copyright (C) 2019-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"names", required_argument, nullptr, 'n'}, + {"outf", required_argument, nullptr, 'o'}, + {"comp", no_argument, nullptr, 'c'}, + {"ignore", required_argument, nullptr, 'i'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool namesset = false; + bool namefileset = false; + bool outfileset = false; + bool ignore_missing = false; + std::vector names; + bool complement = false; + + char * treef = nullptr; + char * outf = nullptr; + char * namesc = nullptr; + char * namesfc = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:n:f:co:ihVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + fileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'n': + namesset = true; + namesc = strdup(optarg); + break; + case 'f': + namefileset = true; + namesfc = strdup(optarg); + check_file_exists(namesfc); + break; + case 'c': + complement = true; + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'i': + ignore_missing = true; + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + if (namesset) { + std::vector tokens2; + std::string del2(","); + tokens2.clear(); + tokenize(namesc, tokens2, del2); + for (auto & tk : tokens2) { + trim_spaces(tk); // this will never have to be used, as spaces would break cmd line call + names.push_back(tk); + } + } else if (namefileset) { + std::ifstream nfstr(namesfc); + std::string tline; + while (getline_safe(nfstr, tline)) { + trim_spaces(tline); + if (!tline.empty()) { + names.push_back(tline); + } + } + nfstr.close(); + } else { + std::cerr << "Error: you need to provide a set of tip names (-n). Exiting." << std::endl; + exit(0); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (fileset) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + // read trees + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + + bool going = true; + if (!complement) { + if (ft == 0) { + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + while (going) { + Tree * tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (going) { + if (is_monophyletic(tree, names, ignore_missing)) { + (*poos) << "true" << std::endl; + } else { + (*poos) << "false" << std::endl; + } + + delete tree; + } + } + } else if (ft == 1) { + while (going) { + Tree * tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (going) { + if (is_monophyletic(tree, names, ignore_missing)) { + (*poos) << "true" << std::endl; + } else { + (*poos) << "false" << std::endl; + } + } + } + } + } else { + // *** check list of names to keep is at least 2 + // don't assume all trees have the same leaf set + std::vector toKeep; + unsigned int numLeaves; + if (ft == 0) { + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + Tree * tree; + while (going) { + tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (going) { + toKeep = get_complement_tip_set(tree, names); + numLeaves = tree->getExternalNodeCount(); + if (numLeaves - static_cast(toKeep.size()) > 1) { + if (is_monophyletic(tree, names, ignore_missing)) { + (*poos) << "true" << std::endl; + } else { + (*poos) << "false" << std::endl; + } + } + delete tree; + } + } + } else if (ft == 1) { + Tree * tree; + while (going) { + tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (going) { + toKeep = get_complement_tip_set(tree, names); + numLeaves = tree->getExternalNodeCount(); + if (numLeaves - static_cast(toKeep.size()) > 1) { + if (is_monophyletic(tree, names, ignore_missing)) { + (*poos) << "true" << std::endl; + } else { + (*poos) << "false" << std::endl; + } + } + delete tree; + } + } + } + } + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_mrca.cpp b/src/main_mrca.cpp new file mode 100644 index 0000000..fd27964 --- /dev/null +++ b/src/main_mrca.cpp @@ -0,0 +1,218 @@ +#include +#include +#include +#include +#include +#include + +#include "node.h" +#include "tree_reader.h" +#include "string_node_object.h" +#include "vector_node_object.h" +#include "tree.h" +#include "utils.h" +#include "tree_utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Get the number of descendant tips of internal nodes specified by mrca statements." << std::endl; + std::cout << "This will take a newick- or nexus-formatted tree from a file or STDIN," << std::endl; + std::cout << "and an MRCA file with format:" << std::endl; + std::cout << "MRCANAME = tip1 tip2 ..." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxmrca [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input newick tree file, STDIN otherwise" << std::endl; + std::cout << " -m, --mrca=FILE file containing MRCA declarations" << std::endl; + std::cout << " -o, --outf=FILE output newick file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} +std::string get_version_line () { + std::string vl = "pxmrca 1.3\n"; + vl += "Copyright (C) 2013-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"outf", required_argument, nullptr, 'o'}, + {"mrca", required_argument, nullptr, 'm'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + char * outf = nullptr; + char * treef = nullptr; + char * mrcaf = nullptr; + bool outfileset = false; + bool fileset = false; + bool mrcaset = false; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:o:m:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + fileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'm': + mrcaset = true; + mrcaf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + if (!mrcaset) { + std::cout << "Must supply mrca file" << std::endl; + exit(0); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (outfileset) { + ofstr = new std::ofstream(outf, std::ios::app); + poos = ofstr; + } else { + poos = &std::cout; + } + if (fileset) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + + std::ifstream inmrca(mrcaf); + std::string mrcaline; + std::map > mrcas; + while (getline_safe(inmrca, mrcaline)) { + if (mrcaline.empty()) { + continue; + } + std::vector searchtokens; + tokenize(mrcaline, searchtokens, "="); + std::string mrcaname = searchtokens[0]; + trim_spaces(mrcaname); + searchtokens.erase(searchtokens.begin()); + searchtokens = tokenize(searchtokens[0]); + mrcas[mrcaname] = searchtokens; + } + inmrca.close(); + + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + + bool going = true; + std::map >::iterator it; + + if (ft == 1) { + Tree * tree; + while (going) { + tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (tree != nullptr) { + for (it=mrcas.begin(); it != mrcas.end(); ++it) { + //std::cout << "Dealing with clade '" << (*it).first << "'" << std::endl; + if (!check_names_against_tree(tree, (*it).second)) { + // allow more flexibility here + std::cerr << "Error: check mrca file for typos. Exiting." << std::endl; + exit(0); + } + Node * nd = tree->getMRCA((*it).second); + (*poos) << (*it).first << " " << nd->get_num_leaves() << " " + << nd->getName() << std::endl; + } + delete tree; + } + } + } else if (ft == 0) { // Nexus. need to worry about possible translation tables + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + Tree * tree; + while (going) { + tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (tree != nullptr) { + for (it=mrcas.begin(); it != mrcas.end(); ++it) { + //std::cout << "Dealing with clade '" << (*it).first << "'" << std::endl; + if (!check_names_against_tree(tree, (*it).second)) { + // allow more flexibility here + std::cerr << "Error: check mrca file for typos. Exiting." << std::endl; + exit(0); + } + Node * nd = tree->getMRCA((*it).second); + (*poos) << (*it).first << " " << nd->get_num_leaves() << " " + << nd->getName() << std::endl; + } + delete tree; + } + } + } + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + + return EXIT_SUCCESS; +} diff --git a/src/main_mrca_cut.cpp b/src/main_mrca_cut.cpp new file mode 100644 index 0000000..42b1395 --- /dev/null +++ b/src/main_mrca_cut.cpp @@ -0,0 +1,226 @@ +#include +#include +#include +#include +#include +#include + +#include "node.h" +#include "tree_reader.h" +#include "string_node_object.h" +#include "vector_node_object.h" +#include "tree.h" +#include "utils.h" +#include "tree_utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Extract subclade(s) from tree(s)." << std::endl; + std::cout << "This will take a newick- or nexus-formatted tree from a file or STDIN," << std::endl; + std::cout << "and an MRCA file with format:" << std::endl; + std::cout << "MRCANAME = tip1 tip2 ..." << std::endl; + std::cout << "If multiple MRCAs are provided, multiple subtrees are returned" << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxmrcacut [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input newick tree file, STDIN otherwise" << std::endl; + std::cout << " -m, --mrca=FILE file containing MRCA declarations" << std::endl; + std::cout << " -o, --outf=FILE output newick file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxmrcacut 1.3\n"; + vl += "Copyright (C) 2013-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim), Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"outf", required_argument, nullptr, 'o'}, + {"mrca", required_argument, nullptr, 'm'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + TreeReader tr; + char * outf = nullptr; + char * treef = nullptr; + char * mrcaf = nullptr; + bool outfileset = false; + bool fileset = false; + bool mrcaset = false; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:o:m:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + fileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'm': + mrcaset = true; + mrcaf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + if (!mrcaset) { + std::cerr << "Error: must supply mrca file. Exiting." << std::endl; + exit(0); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (outfileset) { + ofstr = new std::ofstream(outf, std::ios::app); + poos = ofstr; + } else { + poos = &std::cout; + } + if (fileset) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + + /* + collect clade names + expecting (new) format: + MRCANAME = tip1 tip2 ... + */ + std::ifstream inmrca(mrcaf); + std::string mrcaline; + std::map > mrcas; + while (getline_safe(inmrca, mrcaline)) { + if (mrcaline.empty()) { + continue; + } + std::vector searchtokens; + tokenize(mrcaline, searchtokens, "="); + std::string mrcaname = searchtokens[0]; + trim_spaces(mrcaname); + searchtokens.erase(searchtokens.begin()); + searchtokens = tokenize(searchtokens[0]); + mrcas[mrcaname] = searchtokens; + } + inmrca.close(); + + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + + bool going = true; + std::map >::iterator it; + + if (ft == 1) { + Tree * tree; + while (going) { + tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (tree != nullptr) { + for (it=mrcas.begin(); it != mrcas.end(); ++it) { + //std::cout << "Dealing with clade '" << (*it).first << "'" << std::endl; + if (!check_names_against_tree(tree, (*it).second)) { + // allow more flexibility here + std::cerr << "Error: check mrca file for typos. Exiting." << std::endl; + exit(0); + } + Node * nd = tree->getMRCA((*it).second); + bool bl = has_branchlengths(tree); + (*poos) << nd->getNewick(bl) << ";" << std::endl; + } + delete tree; + } + } + } else if (ft == 0) { // Nexus. need to worry about possible translation tables + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + Tree * tree; + while (going) { + tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (tree != nullptr) { + for (it=mrcas.begin(); it != mrcas.end(); ++it) { + //std::cout << "Dealing with clade '" << (*it).first << "'" << std::endl; + if (!check_names_against_tree(tree, (*it).second)) { + // allow more flexibility here + std::cerr << "Error: check mrca file for typos. Exiting." << std::endl; + exit(0); + } + Node * nd = tree->getMRCA((*it).second); + bool bl = has_branchlengths(tree); + (*poos) << nd->getNewick(bl) << ";" << std::endl; + } + delete tree; + } + } + } + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + + return EXIT_SUCCESS; +} diff --git a/src/main_mrca_name.cpp b/src/main_mrca_name.cpp new file mode 100644 index 0000000..c198827 --- /dev/null +++ b/src/main_mrca_name.cpp @@ -0,0 +1,253 @@ +/* + * The idea behind this is to allow for the naming of internal nodes based + * on given MRCAS and a set of names in a file the input of which should + * look like: + * MRCANAME = tip1 tip2 ... +*/ + +#include +#include +#include +#include +#include +#include + +#include "node.h" +#include "tree_reader.h" +#include "tree.h" +#include "utils.h" +#include "tree_utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Label internal nodes with clade names." << std::endl; + std::cout << "This will take a newick- or nexus-formatted tree from a file or STDIN," << std::endl; + std::cout << "and an MRCA file with format:" << std::endl; + std::cout << " MRCANAME = tip1 tip2 ..." << std::endl; + std::cout << "If no MRCA file is present, internal nodes will be labelled:" << std::endl; + std::cout << " px1, px2, ..., pxn" << std::endl; + std::cout << "Output is written in newick format." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxmrcaname [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input newick tree file, STDIN otherwise" << std::endl; + std::cout << " -m, --mrca=FILE file containing MRCA declarations" << std::endl; + std::cout << " -o, --outf=FILE output newick file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxmrcaname 1.3\n"; + vl += "Copyright (C) 2013-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim), Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"outf", required_argument, nullptr, 'o'}, + {"mrca", required_argument, nullptr, 'm'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + //TreeReader tr; + char * outf = nullptr; + char * treef = nullptr; + char * mrcaf = nullptr; + bool outfileset = false; + bool fileset = false; + bool mrcaset = false; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:o:m:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + fileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'm': + mrcaset = true; + mrcaf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + if (!mrcaset) { + std::cerr << "Because no mrca file was provided, all the internal nodes will be labelled" + << std::endl; + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (outfileset) { + ofstr = new std::ofstream(outf, std::ios::app); + poos = ofstr; + } else { + poos = &std::cout; + } + if (fileset) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + + /* + collect clade names + expecting (new) format: + MRCANAME = tip1 tip2 ... + */ + std::map > mrcas; + if (mrcaset) { + std::ifstream inmrca(mrcaf); + std::string mrcaline; + while (getline_safe(inmrca, mrcaline)) { + if (mrcaline.empty()) { + continue; + } + std::vector searchtokens; + tokenize(mrcaline, searchtokens, "="); + std::string mrcaname = searchtokens[0]; + trim_spaces(mrcaname); + searchtokens.erase(searchtokens.begin()); + searchtokens = tokenize(searchtokens[0]); + mrcas[mrcaname] = searchtokens; + } + inmrca.close(); + } + +// collect tree(s) + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + + int count = 0; + bool going = true; + if (ft == 1) { + Tree * tree; + while (going) { + tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (going) { + if (mrcaset) { + std::map >::iterator it; + for (it = mrcas.begin(); it != mrcas.end(); ++it) { + //std::cout << "Dealing with clade '" << (*it).first << "'" << std::endl; + if (!check_names_against_tree(tree, (*it).second)) { + std::cerr << "Error: check mrca file for typos. Exiting." << std::endl; + exit(0); + } + Node * nd = tree->getMRCA((*it).second); + nd->setName((*it).first); + } + } else { + for (unsigned int i = 0; i < tree->getInternalNodeCount(); i++) { + if (tree->getInternalNode(i)->getName().empty()) { + tree->getInternalNode(i)->setName("px"+std::to_string(count)); + count ++; + } + } + } + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } else { + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + Tree * tree; + while (going) { + tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (tree != nullptr) { + if (mrcaset) { + std::map >::iterator it; + for (it = mrcas.begin(); it != mrcas.end(); ++it) { + //std::cout << "Dealing with clade '" << (*it).first << "'" << std::endl; + if (!check_names_against_tree(tree, (*it).second)) { + std::cerr << "Error: check mrca file for typos. Exiting." << std::endl; + exit(0); + } + Node * nd = tree->getMRCA((*it).second); + nd->setName((*it).first); + } + } else { + for (unsigned int i = 0; i < tree->getInternalNodeCount(); i++) { + if (tree->getInternalNode(i)->getName().empty()) { + tree->getInternalNode(i)->setName("px"+std::to_string(count)); + count ++; + } + } + } + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_nj.cpp b/src/main_nj.cpp new file mode 100644 index 0000000..d2c975c --- /dev/null +++ b/src/main_nj.cpp @@ -0,0 +1,157 @@ +/* +#ifdef _OPENMP + #include +#else + #define omp_get_num_procs() 1 + #define omp_get_max_threads() 1 +#endif +*/ + +#include +#include +#include +#include +#include + +#include "nj.h" +#include "sequence.h" +#include "seq_reader.h" +#include "utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Basic neighbour-joining tree maker." << std::endl; + std::cout << "This will take fasta, fastq, phylip, and nexus inputs from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxnj [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -s, --seqf=FILE input sequence file, STDIN otherwise" << std::endl; + std::cout << " -n, --nthreads=INT number of threads, default=1" << std::endl; + std::cout << " -o, --outf=FILE output newick file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxnj 1.3\n"; + vl += "Copyright (C) 2015-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph F. Walker, Joseph W. Brown, Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"outf", required_argument, nullptr, 'o'}, + {"nthreads", required_argument, nullptr, 'n'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +// temp function to play around with multithreading +/* +void printInfo () { + int foo = omp_get_num_procs(); + int bar = omp_get_max_threads(); + std::cout << "numprocs = " << foo << "; threads = " << bar << std::endl; +} +*/ + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool outfileset = false; + int threads = 1; + char * seqf = nullptr; + char * outf = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:o:n:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'n': + threads = string_to_int(optarg, "-n"); + break; + case 'h': + print_help(); + //printInfo(); // temp + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + std::ostream * poos = nullptr; + std::ofstream * ofstr = nullptr; + std::ifstream * fstr = nullptr; + std::istream * pios = nullptr; + + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + NJOI nj(pios, threads); + (*poos) << nj.get_newick() << std::endl; + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + + return EXIT_SUCCESS; +} diff --git a/src/main_nni.cpp b/src/main_nni.cpp new file mode 100644 index 0000000..c0d83fe --- /dev/null +++ b/src/main_nni.cpp @@ -0,0 +1,186 @@ +#include +#include +#include +#include +#include +#include +#include + +#include "node.h" +#include "tree_reader.h" +#include "tree.h" +#include "utils.h" +#include "tree_utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Generate a Nearest Neighbor Interchange (NNI) tree." << std::endl; + std::cout << "This will take a newick- or nexus-formatted tree from a file or STDIN." << std::endl; + std::cout << "Output is written in newick format." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxnni [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input tree file, STDIN otherwise" << std::endl; + std::cout << " -x, --seed=INT random number seed, clock otherwise" << std::endl; + std::cout << " -o, --outf=FILE output tree file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxnni 1.3\n"; + vl += "Copyright (C) 2013-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim), Joseph F. Walker, and Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"outf", required_argument, nullptr, 'o'}, + {"seed", required_argument, nullptr, 'x'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool fileset = false; + char * outf = nullptr; + char * seqf = nullptr; + int seed = -1; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:o:x:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'x': + seed = string_to_int(optarg, "-x"); + break; + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + + // TODO: upgrade from srand + if (seed != -1) { + srand(static_cast(seed)); + } else { + srand(get_clock_seed()); + } + + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + + int treeCounter = 0; + bool going = true; + if (ft == 1) { // newick. easy + while (going) { + Tree * tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (tree != nullptr) { + if (!is_binary(tree)) { + std::cerr << "Error: this only works for binary trees. Exiting." << std::endl; + exit(0); + } + if (is_rooted(tree)) { + std::cerr << "Error: this only works for unrooted trees. Exiting." << std::endl; + exit(0); + } + //std::cout << "Working on tree #" << treeCounter << std::endl; + std::map > tree_map; + create_tree_map_from_rootnode(tree, tree_map); + nni_from_tree_map(tree, tree_map); + (*poos) << getNewickString(tree) << std::endl; + delete tree; + treeCounter++; + } + } + } else if (ft == 0) { // Nexus. need to worry about possible translation tables + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + while (going) { + Tree * tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (tree != nullptr) { + //std::cout << "Working on tree #" << treeCounter << std::endl; + std::map > tree_map; + create_tree_map_from_rootnode(tree, tree_map); + nni_from_tree_map(tree, tree_map); + (*poos) << getNewickString(tree) << std::endl; + delete tree; + treeCounter++; + } + } + } + return EXIT_SUCCESS; +} diff --git a/src/main_nw.cpp b/src/main_nw.cpp new file mode 100644 index 0000000..a4fff9c --- /dev/null +++ b/src/main_nw.cpp @@ -0,0 +1,213 @@ +#include +#include +#include +#include +#include +#include +#include + +#ifdef OMP +#include +#endif + +#include "utils.h" +#include "seq_reader.h" +#include "sequence.h" +#include "seq_utils.h" +#include "seq_models.h" +#include "pairwise_alignment.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Conduct Needleman-Wunsch analysis for all the seqs in a file." << std::endl; + std::cout << "This will take fasta, fastq, phylip, and nexus formats from a file or STDIN." << std::endl; + std::cout << "Output is a list of the scores and distances (and the alignments if asked)." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxnw [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -s, --seqf=FILE input sequence file, STDIN otherwise" << std::endl; + std::cout << " -a, --outalnf=FILE output sequence file, won't output otherwise" << std::endl; + std::cout << " -t, --seqtype=INT sequence type, default=DNA (DNA=0,AA=1)" << std::endl; + std::cout << " -m, --matrix=FILE scoring matrix, default DNA=EDNAFULL, AA=BLOSUM62" << std::endl; + std::cout << " -n, --nthreads=INT number of threads (open mp), default=2" << std::endl; + std::cout << " -v, --verbose make the output more verbose, turns off parallel" << std::endl; + std::cout << " -o, --outf=FILE output score/distance file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxnw 1.3\n"; + vl += "Copyright (C) 2013-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"outf", required_argument, nullptr, 'o'}, + {"outalnf", required_argument, nullptr, 'a'}, + {"seqtype", required_argument, nullptr, 't'}, + {"matrix", required_argument, nullptr, 'm'}, + {"nthreads", required_argument, nullptr, 'n'}, + {"verbose", no_argument, nullptr, 'v'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool outfileset = false; + //bool outalnfileset = false; // not used + bool matrixfileset = false; + char * seqf = nullptr; + char * outf = nullptr; + //char * outaf = nullptr; not used + char * matf = nullptr; + int seqtype = 0; // DNA default, 1 = aa + int num_threads = 2; // DNA default, 1 = aa + bool verbose = false; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:o:a:t:m:n:vhVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'a': + //outalnfileset = true; + //outaf = strdup(optarg); + break; + case 't': + seqtype = string_to_int(optarg, "-t"); + if (seqtype > 1) { + std::cerr << "Error: don't recognize seqtype '" << seqtype + << "'. Must be 0 (DNA) or 1 (AA). Exiting." << std::endl; + exit(0); + } + break; + case 'm': + matrixfileset = true; + matf = strdup(optarg); + break; + case 'n': + num_threads = string_to_int(optarg, "-n"); + break; + case 'v': + verbose = true; + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + std::cout << get_NW_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + std::map > sc_mat; + if (matrixfileset) { + read_scoring_matrix(matf, sc_mat); + } else { + if (seqtype == 0) { + get_ednafull(sc_mat); + } else {//aa + + // TODO + + } + } + Sequence seq; + std::string retstring; + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + std::string alphaName; + std::vector seqs = ingest_alignment(pios, alphaName); + + // go all by all + for (unsigned int i = 0; i < seqs.size(); i++) { +#ifdef OMP + omp_set_num_threads(num_threads); +#endif + #pragma omp parallel for + for (unsigned int j = 0; j < seqs.size(); j++) { + if (j > i) { + std::string aln1; + std::string aln2; + double sc = nw(seqs[i], seqs[j], sc_mat, 0, aln1, aln2); + #pragma omp critical + { + std::cout << seqs[i].get_id() << "\t" << seqs[j].get_id() + << "\t" << sc << std::endl; + if (verbose) { + std::cout << seqs[i].get_id() << "\t" << aln1 << "\n" + << seqs[j].get_id() << "\t" << aln2 << std::endl; + } + } + } + } + } + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_poly.cpp b/src/main_poly.cpp new file mode 100644 index 0000000..a2e7377 --- /dev/null +++ b/src/main_poly.cpp @@ -0,0 +1,175 @@ +#include +#include +#include +#include +#include +#include +#include + +#include "utils.h" +#include "tree_reader.h" +#include "tree_utils.h" +#include "polytomy.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Randomly sample polytomies to generate a binary tree." << std::endl; + std::cout << "Currently only works with rooted trees (checked)" << std::endl; + std::cout << "Output is written in newick format." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxpoly [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input tree file, STDIN otherwise" << std::endl; + std::cout << " -x, --seed=INT random number seed, clock otherwise" << std::endl; + std::cout << " -o, --outf=FILE output file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxpoly 1.3\n"; + vl += "Copyright (C) 2021-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"seed", required_argument, nullptr, 'x'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool tfileset = false; + long int seed = -1; + + char * outf = nullptr; + char * treef = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:x:o:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + tfileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'x': + seed = string_to_long_int(optarg, "-x"); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (tfileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (tfileset) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + Polytomy pol(seed); + + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + bool going = true; + if (ft == 1) { + while (going) { + Tree * tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (going) { + if (!is_rooted(tree)) { + std::cerr << "Error: this currently only works for rooted trees. Exiting." << std::endl; + exit(0); + } + pol.sample_polytomies(tree); + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } else if (ft == 0) { // Nexus. need to worry about possible translation tables + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + while (going) { + Tree * tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (tree != nullptr) { + if (!is_rooted(tree)) { + std::cerr << "Error: this currently only works for rooted trees. Exiting." << std::endl; + exit(0); + } + pol.sample_polytomies(tree); + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } + + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_recode.cpp b/src/main_recode.cpp new file mode 100644 index 0000000..428cbc7 --- /dev/null +++ b/src/main_recode.cpp @@ -0,0 +1,245 @@ +/* + Bare-bones sequence recoding. + Codon-recoding will require genetic codes, and so knowledge of the taxon-specific codes. + TODO: implement 'degen' coding. +*/ + +#include +#include +#include +#include +#include +#include + +#include "utils.h" +#include "sequence.h" +#include "seq_reader.h" +#include "recode.h" +#include "log.h" +#include "citations.h" + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Nucleotide sequence recoding." << std::endl; + std::cout << "This will take fasta, fastq, phylip, and nexus formats from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxrecode [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -s, --seqf=FILE input sequence file, STDIN otherwise" << std::endl; + std::cout << " -r, --recode=STRING string identifying recoding scheme (default: RY)" << std::endl; + std::cout << " Supported recodings (use any valid combination):" << std::endl; + std::cout << " R = A|G" << std::endl; + std::cout << " Y = C|T" << std::endl; + std::cout << " S = C|G" << std::endl; + std::cout << " W = A|T" << std::endl; + std::cout << " M = A|C" << std::endl; + std::cout << " K = G|T" << std::endl; + std::cout << " B = C|G|T" << std::endl; + std::cout << " D = A|G|T" << std::endl; + std::cout << " H = A|C|T" << std::endl; + std::cout << " V = A|C|G" << std::endl; + std::cout << " -o, --outf=FILE output sequence file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxrecode 1.3\n"; + vl += "Copyright (C) 2013-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"recode", required_argument, nullptr, 'r'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool fileset = false; + std::string recodescheme; + char * outf = nullptr; + char * seqf = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:r:o:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'r': + recodescheme = strdup(optarg); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + // set default if arg not provided + if (recodescheme.empty()) { + recodescheme = "RY"; + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + + SequenceRecoder sr (recodescheme); + + Sequence seq; + std::string retstring; + + int ft = test_seq_filetype_stream(*pios, retstring); + int num_taxa, num_char; // not used, but required by some reader functions + bool first = true; // check first seq alphabet to make sure DNA. exit otherwise + std::string alpha; + + // extra stuff to deal with possible interleaved nexus + if (ft == 0) { + bool interleave = false; + get_nexus_dimensions(*pios, num_taxa, num_char, interleave); + retstring = ""; // need to do this to let seqreader know we are mid-file + if (!interleave) { + while (read_next_seq_from_stream(*pios, ft, retstring, seq)) { + if (first) { + alpha = seq.get_alpha_name(); + if (alpha != "DNA") { + std::cerr << "Error: this only works for DNA. Exiting." << std::endl; + exit(0); + } + first = false; + } + (*poos) << ">" << seq.get_id() << std::endl + << sr.get_recoded_seq(seq.get_sequence()) << std::endl; + } + } else { + std::vector seqs = read_interleaved_nexus(*pios, num_taxa, num_char); + for (const auto & sq : seqs) { + seq = sq; + if (first) { + alpha = seq.get_alpha_name(); + if (alpha != "DNA") { + std::cerr << "Error: this only works for DNA. Exiting." << std::endl; + exit(0); + } + first = false; + } + (*poos) << ">" << seq.get_id() << std::endl + << sr.get_recoded_seq(seq.get_sequence()) << std::endl; + } + } + } else { + bool complicated_phylip = false; + // check if we are dealing with a complicated phylip format + if (ft == 1) { + get_phylip_dimensions(retstring, num_taxa, num_char); + complicated_phylip = is_complicated_phylip(*pios, num_char); + } + if (complicated_phylip) { + std::vector seqs = read_phylip(*pios, num_taxa, num_char); + for (const auto & sq : seqs) { + seq = sq; + if (first) { + alpha = seq.get_alpha_name(); + if (alpha != "DNA") { + std::cerr << "Error: this only works for DNA. Exiting." << std::endl; + exit(0); + } + first = false; + } + (*poos) << ">" << seq.get_id() << std::endl + << sr.get_recoded_seq(seq.get_sequence()) << std::endl; + } + } else { + // fasta, fastq, or simple phylip + while (read_next_seq_from_stream(*pios, ft, retstring, seq)) { + if (first) { + alpha = seq.get_alpha_name(); + if (alpha != "DNA") { + std::cerr << "Error: this only works for DNA. Exiting." << std::endl; + exit(0); + } + first = false; + } + (*poos) << ">" << seq.get_id() << std::endl + << sr.get_recoded_seq(seq.get_sequence()) << std::endl; + } + // fasta has a trailing one + if (ft == 2) { + (*poos) << ">" << seq.get_id() << std::endl + << sr.get_recoded_seq(seq.get_sequence()) << std::endl; + } + } + } + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_revcomp.cpp b/src/main_revcomp.cpp new file mode 100644 index 0000000..c5b6c34 --- /dev/null +++ b/src/main_revcomp.cpp @@ -0,0 +1,260 @@ +#include +#include +#include +#include +#include +#include +#include +#include +#include + +#include "seq_reader.h" +#include "sequence.h" +#include "seq_utils.h" +#include "utils.h" +#include "log.h" +#include "edlib.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); +bool reverse_it_or_not (std::vector& seqs, Sequence comp_seq); + +void print_help () { + std::cout << "Reverse complement sequences." << std::endl; + std::cout << "This will take fasta, fastq, phylip, and nexus formats from a file or STDIN." << std::endl; + std::cout << "Results are written in fasta format." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxrevcomp [OPTIONS]... [FILE]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -s, --seqf=FILE input sequence file, STDIN otherwise" << std::endl; + std::cout << " -i, --ids=IDS a comma sep list of ids to flip (NO SPACES!)" << std::endl; + std::cout << " -g, --guess EXPERIMENTAL: guess whether there are seqs that need to be " << std::endl; + std::cout << " rev comp. uses edlib library on first seq" << std::endl; + std::cout << " -p, --pguess EXPERIMENTAL: progressively guess " << std::endl; + std::cout << " -m, --sguess EXPERIMENTAL: sampled guess " << std::endl; + std::cout << " -o, --outf=FILE output sequence file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxrevcomp 1.3\n"; + vl += "Copyright (C) 2017-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"ids", required_argument, nullptr, 'i'}, + {"guess", no_argument, nullptr, 'g'}, + {"pguess", no_argument, nullptr, 'p'}, + {"sguess", no_argument, nullptr, 'm'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +bool reverse_it_or_not(std::vector& seqs, Sequence comp_seq) { + int best_distance = 10000000; + int best_dis_rev = 100000000; + bool res = false; + std::string comp = comp_seq.get_sequence(); + std::string revcomp = comp_seq.reverse_complement(); + for (auto & seq : seqs) { + EdlibAlignResult result = edlibAlign(comp.c_str(), static_cast(comp.length()), + seq.get_sequence().c_str(), static_cast(seq.get_length()), + edlibNewAlignConfig(best_distance, EDLIB_MODE_HW, EDLIB_TASK_DISTANCE)); + if (result.editDistance < 0) { + continue; + } + if (result.editDistance < best_distance) { + best_distance = result.editDistance; + } + edlibFreeAlignResult(result); + } + for (auto & seq : seqs) { + EdlibAlignResult result = edlibAlign(revcomp.c_str(), static_cast(revcomp.length()), + seq.get_sequence().c_str(), static_cast(seq.get_length()), + edlibNewAlignConfig(best_distance, EDLIB_MODE_HW, EDLIB_TASK_DISTANCE)); + if (result.editDistance < 0) { + continue; + } + if (result.editDistance < best_dis_rev) { + best_dis_rev = result.editDistance; + } + edlibFreeAlignResult(result); + } + if (best_dis_rev < best_distance) { + res = true; + } + return res; +} + +int main(int argc, char * argv[]) { + srand(static_cast(time(nullptr))); + log_call(argc, argv); + + bool fileset = false; + bool outfileset = false; + bool idsset = false; + std::vector ids; + + bool guess = false; + bool pguess = false; + bool sguess = false; + double sguess_samplenum = 0.2; // 10% of them will be used for revcomp + char * seqf = nullptr; + char * outf = nullptr; + char * idssc = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:i:o:mgphVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'i': + idsset = true; + idssc = strdup(optarg); + break; + case 'g': + guess = true; + break; + case 'p': + guess = true; + pguess = true; + break; + case 'm': + guess = true; + sguess = true; + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + if (idsset) { + std::vector tokens2; + tokenize(idssc, tokens2, ","); + for (auto & tk : tokens2) { + trim_spaces(tk); // this will never have to be used, as spaces would break cmd line call + ids.push_back(tk); + } + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + Sequence seq; + std::string retstring; + int ft = test_seq_filetype_stream(*pios, retstring); + if (!guess) { + while (read_next_seq_from_stream(*pios, ft, retstring, seq)) { + if (!idsset || std::count(ids.begin(), ids.end(), seq.get_id()) == 1) { + seq.perm_reverse_complement(); + } + (*poos) << seq.get_fasta(); + } + if (ft == 2) { + if (!idsset || std::count(ids.begin(), ids.end(), seq.get_id()) == 1) { + seq.perm_reverse_complement(); + } + (*poos) << seq.get_fasta(); + } + } else { + bool first = true; + std::vector done; //for pguess + while (read_next_seq_from_stream(*pios, ft, retstring, seq)) { + if (first) { + done.push_back(seq); + (*poos) << seq.get_fasta(); + first = false; + } else { + if (reverse_it_or_not(done, seq)) { + seq.perm_reverse_complement(); + } + (*poos) << seq.get_fasta(); + if (pguess) { + done.push_back(seq); + } else if (sguess) { + double r = (static_cast(rand()) / static_cast(RAND_MAX)); + if (r < sguess_samplenum) { + done.push_back(seq); + } + } + } + } + if (ft == 2) { + if (reverse_it_or_not(done, seq)) { + seq.perm_reverse_complement(); + } + (*poos) << seq.get_fasta(); + + } + } + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_rls.cpp b/src/main_rls.cpp new file mode 100644 index 0000000..2b9a05e --- /dev/null +++ b/src/main_rls.cpp @@ -0,0 +1,252 @@ +#include +#include +#include +#include +#include +#include +#include + +#include "utils.h" +#include "sequence.h" +#include "seq_reader.h" +#include "relabel.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Taxon relabelling for alignments." << std::endl; + std::cout << "This will take fasta, phylip, and nexus formats from a file or STDIN." << std::endl; + std::cout << "Two ordered lists of taxa, -c (current) and -n (new) must be provided." << std::endl; + std::cout << "Results are written in fasta format." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxrls [OPTIONS]... FILES" << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -s, --seqf=FILE input seq file, STDIN otherwise" << std::endl; + std::cout << " -c, --cnames=FILE file containing current taxon labels (one per line)" << std::endl; + std::cout << " -n, --nnames=FILE file containing new taxon labels (one per line)" << std::endl; + std::cout << " -v, --verbose make the output more verbose" << std::endl; + std::cout << " -o, --outf=FILE output file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxrls 1.3\n"; + vl += "Copyright (C) 2016-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown, Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"cnames", required_argument, nullptr, 'c'}, + {"nnames", required_argument, nullptr, 'n'}, + {"outf", required_argument, nullptr, 'o'}, + {"verbose", no_argument, nullptr, 'v'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool sfileset = false; + bool cfileset = false; + bool nfileset = false; + bool verbose = false; + char * outf = nullptr; + char * seqf = nullptr; + std::string cnamef; + std::string nnamef; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:c:n:o:vhVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + sfileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'c': + cfileset = true; + cnamef = strdup(optarg); + check_file_exists(cnamef); + break; + case 'n': + nfileset = true; + nnamef = strdup(optarg); + check_file_exists(nnamef); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'v': + verbose = true; + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (sfileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (!nfileset || !cfileset) { + std::cerr << "Error: must supply both name files (-c for current, -n for new). Exiting." << std::endl; + exit(0); + } + + if (sfileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + Relabel rl (cnamef, nnamef, verbose); + + std::set orig = rl.get_names_to_replace(); + + Sequence seq; + std::string retstring; + bool success = false; + int num_taxa, num_char; // not used, but required by some reader functions + + int ft = test_seq_filetype_stream(*pios, retstring); + + // extra stuff to deal with possible interleaved nexus + if (ft == 0) { + bool interleave = false; + get_nexus_dimensions(*pios, num_taxa, num_char, interleave); + retstring = ""; // need to do this to let seqreader know we are mid-file + if (!interleave) { + while (read_next_seq_from_stream(*pios, ft, retstring, seq)) { + std::string terp = seq.get_id(); + success = rl.relabel_sequence(seq); + if (success) { + orig.erase(terp); + } + (*poos) << ">" << seq.get_id() << std::endl; + (*poos) << seq.get_sequence() << std::endl; + } + } else { + std::vector seqs = read_interleaved_nexus(*pios, num_taxa, num_char); + for (const auto & sq : seqs) { + seq = sq; + std::string terp = seq.get_id(); + success = rl.relabel_sequence(seq); + if (success) { + orig.erase(terp); + } + (*poos) << ">" << seq.get_id() << std::endl; + (*poos) << seq.get_sequence() << std::endl; + } + } + } else { + bool complicated_phylip = false; + // check if we are dealing with a complicated phylip format + if (ft == 1) { + get_phylip_dimensions(retstring, num_taxa, num_char); + complicated_phylip = is_complicated_phylip(*pios, num_char); + } + if (complicated_phylip) { + std::vector seqs = read_phylip(*pios, num_taxa, num_char); + for (const auto & sq : seqs) { + seq = sq; + std::string terp = seq.get_id(); + success = rl.relabel_sequence(seq); + if (success) { + orig.erase(terp); + } + (*poos) << ">" << seq.get_id() << std::endl; + (*poos) << seq.get_sequence() << std::endl; + } + } else { + // fasta, fastq, or simple phylip + while (read_next_seq_from_stream(*pios, ft, retstring, seq)) { + std::string terp = seq.get_id(); + success = rl.relabel_sequence(seq); + if (success) { + orig.erase(terp); + } + (*poos) << ">" << seq.get_id() << std::endl; + (*poos) << seq.get_sequence() << std::endl; + } + // fasta has a trailing one + if (ft == 2) { + std::string terp = seq.get_id(); + success = rl.relabel_sequence(seq); + if (success) { + orig.erase(terp); + } + (*poos) << ">" << seq.get_id() << std::endl; + (*poos) << seq.get_sequence() << std::endl; + } + } + } + + if (!orig.empty()) { + if (verbose) { + std::cerr << "The following names to match were not found in the alignment:" << std::endl; + for (const auto & elem : orig) { + std::cerr << elem << std::endl; + } + } + } + + if (sfileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_rlt.cpp b/src/main_rlt.cpp new file mode 100644 index 0000000..cdc3497 --- /dev/null +++ b/src/main_rlt.cpp @@ -0,0 +1,190 @@ + +#include +#include +#include +#include +#include +#include + +#include "utils.h" +#include "tree_reader.h" +#include "relabel.h" +#include "tree_utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Taxon relabelling for trees." << std::endl; + std::cout << "Two ordered lists of taxa, -c (current) and -n (new) must be provided." << std::endl; + std::cout << "This will take a newick- or nexus-formatted tree from a file or STDIN." << std::endl; + std::cout << "Output is written in newick format." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxrlt [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input tree file, STDIN otherwise" << std::endl; + std::cout << " -c, --cnames=FILE file containing current taxon labels (one per line)" << std::endl; + std::cout << " -n, --nnames=FILE file containing new taxon labels (one per line)" << std::endl; + std::cout << " -v, --verbose make the output more verbose" << std::endl; + std::cout << " -o, --outf=FILE output file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxrlt 1.3\n"; + vl += "Copyright (C) 2018-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown, Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"cnames", required_argument, nullptr, 'c'}, + {"nnames", required_argument, nullptr, 'n'}, + {"outf", required_argument, nullptr, 'o'}, + {"verbose", no_argument, nullptr, 'v'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool tfileset = false; + bool cfileset = false; + bool nfileset = false; + bool verbose = false; + char * outf = nullptr; + char * treef = nullptr; + std::string cnamef; + std::string nnamef; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:c:n:o:vhVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + tfileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'c': + cfileset = true; + cnamef = strdup(optarg); + check_file_exists(cnamef); + break; + case 'n': + nfileset = true; + nnamef = strdup(optarg); + check_file_exists(nnamef); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'v': + verbose = true; + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (tfileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (!nfileset || !cfileset) { + std::cerr << "Error: must supply both name files (-c for current, -n for new). Exiting." << std::endl; + exit(0); + } + + if (tfileset) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + Relabel rl (cnamef, nnamef, verbose); + + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + bool going = true; + if (ft == 1) { + while (going) { + Tree * tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (going) { + rl.relabel_tree(tree); + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } else if (ft == 0) { // Nexus. need to worry about possible translation tables + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + while (going) { + Tree * tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (tree != nullptr) { + rl.relabel_tree(tree); + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } + + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_rmk.cpp b/src/main_rmk.cpp new file mode 100644 index 0000000..c0529db --- /dev/null +++ b/src/main_rmk.cpp @@ -0,0 +1,156 @@ +#include +#include +#include +#include +#include +#include +#include + +#include "tree_reader.h" +#include "tree.h" +#include "tree_utils.h" +#include "utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Remove two-degree internal nodes ('knuckles') from a tree." << std::endl; + std::cout << "This will take a newick- or nexus-formatted tree from a file or STDIN." << std::endl; + std::cout << "Output is written in newick format." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxrmk [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input tree file, STDIN otherwise" << std::endl; + std::cout << " -o, --outf=FILE output tree file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxrmk 1.3\n"; + vl += "Copyright (C) 2016-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown, Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool fileset = false; + char * outf = nullptr; + char * treef = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:vranublio:x:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + fileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + if (fileset) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + + bool going = true; + if (ft == 1) { + while (going) { + Tree * tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (tree != nullptr) { + deknuckle_tree(tree); + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } else if (ft == 0) { // Nexus. need to worry about possible translation tables + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + while (going) { + Tree * tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (tree != nullptr) { + deknuckle_tree(tree); + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } + + return EXIT_SUCCESS; +} diff --git a/src/main_rms.cpp b/src/main_rms.cpp new file mode 100644 index 0000000..4f35301 --- /dev/null +++ b/src/main_rms.cpp @@ -0,0 +1,296 @@ +#include +#include +#include +#include +#include +#include +#include +#include + +#include "utils.h" +#include "sequence.h" +#include "seq_reader.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Remove sequences by label." << std::endl; + std::cout << "This will take fasta, fastq, phylip, and nexus formats from a file or STDIN." << std::endl; + std::cout << "Results are written in fasta format." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxrms [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -s, --seqf=FILE input nucleotide sequence file, STDIN otherwise" << std::endl; + std::cout << " -n, --names=CSL names sep by commas (NO SPACES!)" << std::endl; + std::cout << " -f, --namesf=FILE names in a file (each on a line)" << std::endl; + std::cout << " -r, --regex=STRING match tip labels by a regular expression" << std::endl; + std::cout << " -c, --comp take the complement (i.e. remove any taxa not in list)" << std::endl; + std::cout << " -o, --outf=FILE output sequence file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxrms 1.3\n"; + vl += "Copyright (C) 2015-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown, Joseph F. Walker, Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"names", required_argument, nullptr, 'n'}, + {"namesf", required_argument, nullptr, 'f'}, + {"regex", required_argument, nullptr, 'r'}, + {"comp", no_argument, nullptr, 'c'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool outfileset = false; + bool namesset = false; + bool namefileset = false; + bool complement = false; + bool regex = false; + std::regex regexp; + std::string regex_pattern; + bool match = false; // for regex searches + + char * namesc = nullptr; + char * namesfc = nullptr; + char * seqf = nullptr; + char * outf = nullptr; + std::string rmf; + std::vector names; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:n:f:r:co:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'n': + namesset = true; + namesc = strdup(optarg); + break; + case 'f': + namefileset = true; + namesfc = strdup(optarg); + check_file_exists(namesfc); + break; + case 'r': + regex = true; + regex_pattern = strdup(optarg); + regexp.assign(regex_pattern); + break; + case 'c': + complement = true; + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (namesset) { + std::vector tokens2; + std::string del2(","); + tokens2.clear(); + tokenize(namesc, tokens2, del2); + for (auto & tk : tokens2) { + trim_spaces(tk); // this will never have to be used, as spaces would break cmd line call + names.push_back(tk); + } + } else if (namefileset) { + std::ifstream nfstr(namesfc); + std::string tline; + while (getline_safe(nfstr, tline)) { + trim_spaces(tline); + if (tline.empty()) { + continue; + } + names.push_back(tline); + } + nfstr.close(); + } else if (!regex) { + std::cerr << "Error: you must specify which tips to remove." << std::endl; + std::cerr << "This can be done with a list (-n) or file (-f) of names, or a regular expression (-r)." + << std::endl; + std::cerr << "Exiting." << std::endl; + exit(0); + } + + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + Sequence seq; + std::string retstring; + std::string seq_name; + int num_taxa, num_char; // not used, but required by some readers + + int ft = test_seq_filetype_stream(*pios, retstring); + std::vector::iterator it; + + // extra stuff to deal with possible interleaved nexus + if (ft == 0) { + bool interleave = false; + get_nexus_dimensions(*pios, num_taxa, num_char, interleave); + retstring = ""; // need to do this to let seqreader know we are mid-file + if (!interleave) { + while (read_next_seq_from_stream(*pios, ft, retstring, seq)) { + seq_name = seq.get_id(); + if (regex) { + match = std::regex_search(seq_name, regexp); + if ( (match && complement) || (!match && !complement) ) { + (*poos) << ">" << seq_name << "\n" << seq.get_sequence() << std::endl; + } + } else { + it = find(names.begin(), names.end(), seq_name); + if ( ((!complement) && (it == names.end())) || ((complement) && (it != names.end())) ) { + (*poos) << ">" << seq_name << "\n" << seq.get_sequence() << std::endl; + } + } + } + } else { + std::vector seqs = read_interleaved_nexus(*pios, num_taxa, num_char); + for (const auto & sq : seqs) { + seq = sq; + seq_name = seq.get_id(); + if (regex) { + match = std::regex_search(seq_name, regexp); + if ( (match && complement) || (!match && !complement) ) { + (*poos) << ">" << seq_name << "\n" << seq.get_sequence() << std::endl; + } + } else { + it = find(names.begin(), names.end(), seq_name); + if ( ((!complement) && (it == names.end())) || ((complement) && (it != names.end())) ) { + (*poos) << ">" << seq_name << "\n" << seq.get_sequence() << std::endl; + } + } + } + } + } else { + bool complicated_phylip = false; + // check if we are dealing with a complicated phylip format + if (ft == 1) { + get_phylip_dimensions(retstring, num_taxa, num_char); + complicated_phylip = is_complicated_phylip(*pios, num_char); + } + if (complicated_phylip) { + std::vector seqs = read_phylip(*pios, num_taxa, num_char); + for (const auto & sq : seqs) { + seq = sq; + seq_name = seq.get_id(); + if (regex) { + match = std::regex_search(seq_name, regexp); + if ( (match && complement) || (!match && !complement) ) { + (*poos) << ">" << seq_name << "\n" << seq.get_sequence() << std::endl; + } + } else { + it = find(names.begin(), names.end(), seq_name); + if ( ((!complement) && (it == names.end())) || ((complement) && (it != names.end())) ) { + (*poos) << ">" << seq_name << "\n" << seq.get_sequence() << std::endl; + } + } + } + } else { + // fasta, fastq, or simple phylip + while (read_next_seq_from_stream(*pios, ft, retstring, seq)) { + seq_name = seq.get_id(); + if (regex) { + match = std::regex_search(seq_name, regexp); + if ( (match && complement) || (!match && !complement) ) { + (*poos) << ">" << seq_name << "\n" << seq.get_sequence() << std::endl; + } + } else { + it = find(names.begin(), names.end(), seq_name); + if ( ((!complement) && (it == names.end())) || ((complement) && (it != names.end())) ) { + (*poos) << ">" << seq_name << "\n" << seq.get_sequence() << std::endl; + } + } + } + // fasta has a trailing one + if (ft == 2) { + seq_name = seq.get_id(); + if (regex) { + match = std::regex_search(seq_name, regexp); + if ( (match && complement) || (!match && !complement) ) { + (*poos) << ">" << seq_name << "\n" << seq.get_sequence() << std::endl; + } + } else { + it = find(names.begin(), names.end(), seq_name); + if ( ((!complement) && (it == names.end())) || ((complement) && (it != names.end())) ) { + (*poos) << ">" << seq_name << "\n" << seq.get_sequence() << std::endl; + } + } + } + } + } + + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_rmt.cpp b/src/main_rmt.cpp new file mode 100644 index 0000000..b00cf74 --- /dev/null +++ b/src/main_rmt.cpp @@ -0,0 +1,304 @@ +#include +#include +#include +#include +#include +#include +#include +#include + +#include "tree.h" +#include "tree_reader.h" +#include "utils.h" +#include "tree_utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Remove tree tips by label." << std::endl; + std::cout << "This will take a newick- or nexus-formatted tree from a file or STDIN." << std::endl; + std::cout << "Output is written in newick format." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxrmt [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input tree file, STDIN otherwise" << std::endl; + std::cout << " -n, --names=CSL names sep by commas (NO SPACES!)" << std::endl; + std::cout << " -f, --namesf=FILE names in a file (each on a line)" << std::endl; + std::cout << " -r, --regex=STRING match tip labels by a regular expression" << std::endl; + std::cout << " -c, --comp take the complement (i.e. remove any taxa not in list)" << std::endl; + std::cout << " -s, --silent suppress warnings of missing tips" << std::endl; + std::cout << " -o, --outf=FILE output tree file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxrmt 1.3\n"; + vl += "Copyright (C) 2014-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown, Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"names", required_argument, nullptr, 'n'}, + {"namesf", required_argument, nullptr, 'f'}, + {"regex", required_argument, nullptr, 'r'}, + {"outf", required_argument, nullptr, 'o'}, + {"comp", no_argument, nullptr, 'c'}, + {"silent", required_argument, nullptr, 's'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool namesset = false; + bool namefileset = false; + bool outfileset = false; + bool silent = false; + std::vector names; + bool complement = false; + bool regex = false; + std::string regex_pattern; + + char * treef = nullptr; + char * outf = nullptr; + char * namesc = nullptr; + char * namesfc = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:n:f:r:co:shVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + fileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'n': + namesset = true; + namesc = strdup(optarg); + break; + case 'f': + namefileset = true; + namesfc = strdup(optarg); + check_file_exists(namesfc); + break; + case 'r': + regex = true; + regex_pattern = strdup(optarg); + break; + case 'c': + complement = true; + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 's': + silent = true; + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + if (namesset) { + std::vector tokens2; + std::string del2(","); + tokens2.clear(); + tokenize(namesc, tokens2, del2); + for (auto & tk : tokens2) { + trim_spaces(tk); // this will never have to be used, as spaces would break cmd line call + names.push_back(tk); + } + } else if (namefileset) { + std::ifstream nfstr(namesfc); + std::string tline; + while (getline_safe(nfstr, tline)) { + trim_spaces(tline); + names.push_back(tline); + } + nfstr.close(); + } else if (!regex) { + std::cerr << "Error: you must specify which tips to remove." << std::endl; + std::cerr << "This can be done with a list (-n) or file (-f) of names, or a regular expression (-r)." + << std::endl; + std::cerr << "Exiting." << std::endl; + exit(0); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (fileset) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + //read trees + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + + // magic number: if number to be remove is > than this, use the induced tree procedure instead + // this is demonstrated here: https://github.com/FePhyFoFum/phyx/issues/74 + unsigned int MAX_RMT = 50; + + bool going = true; + unsigned int numLeaves; + unsigned int num_names = 0; + std::vector toKeep; // if trace is used + std::vector currNames; // keep original copy of names in case sampling differs across trees + + if (ft == 0) { + // nexus + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + Tree * tree; + while (going) { + tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (going) { + numLeaves = tree->getExternalNodeCount(); + currNames = names; + + if (regex) { + currNames = get_names_in_tree_regex(tree, regex_pattern); + } + if (complement) { + currNames = get_complement_tip_set(tree, currNames); + } + // check names against the tree (instead of just length of names, which might be bad) + if (!regex && !complement) { + currNames = get_names_in_tree(tree, currNames); + } + + num_names = static_cast(currNames.size()); + + if (num_names == 0) { + if (!silent) { + std::cerr << "Error: no matching tip labels. Returning original tree." << std::endl; + } + (*poos) << getNewickString(tree) << std::endl; + } else if (numLeaves - num_names < 2) { + std::cerr << "Error: pruning would produce a tree with " + << (numLeaves - num_names) << " tips. No result is returned." << std::endl; + } else { + if (num_names < MAX_RMT) { + remove_tips(tree, currNames, silent); + } else { + toKeep = get_complement_tip_set(tree, currNames); + tree = get_induced_tree(tree, toKeep, silent); + } + (*poos) << getNewickString(tree) << std::endl; + } + delete tree; + } + } + } else if (ft == 1) { + // newick + Tree * tree; + while (going) { + tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (going) { + numLeaves = tree->getExternalNodeCount(); + currNames = names; + + if (regex) { + currNames = get_names_in_tree_regex(tree, regex_pattern); + } + if (complement) { + currNames = get_complement_tip_set(tree, currNames); + } + // check names against the tree (instead of just length of names, which might be bad) + if (!regex && !complement) { + currNames = get_names_in_tree(tree, currNames); + } + + num_names = static_cast(currNames.size()); + + if (num_names == 0) { + if (!silent) { + std::cerr << "Error: no matching tip labels. Returning original tree." << std::endl; + } + (*poos) << getNewickString(tree) << std::endl; + } else if (numLeaves - num_names < 2) { + std::cerr << "Error: pruning would produce a tree with " + << (numLeaves - num_names) << " tips. No result is returned." << std::endl; + } else { + if (num_names < MAX_RMT) { + remove_tips(tree, currNames, silent); + } else { + toKeep = get_complement_tip_set(tree, currNames); + tree = get_induced_tree(tree, toKeep, silent); + } + (*poos) << getNewickString(tree) << std::endl; + } + delete tree; + } + } + } + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_rr.cpp b/src/main_rr.cpp new file mode 100644 index 0000000..28a00eb --- /dev/null +++ b/src/main_rr.cpp @@ -0,0 +1,329 @@ +#include +#include +#include +#include +#include +#include +#include +#include +#include + +#include "tree.h" +#include "tree_reader.h" +#include "utils.h" +#include "tree_utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Reroot (or unroot) a tree file and produce a newick." << std::endl; + std::cout << "This will take a newick- or nexus-formatted tree from a file or STDIN." << std::endl; + std::cout << "Output is written in newick format." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxrr [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input tree file, STDIN otherwise" << std::endl; + std::cout << " -g, --outgroups=CSL outgroup sep by commas (NO SPACES!)" << std::endl; + std::cout << " -f, --namesf=FILE outgroups in a file (each on a line)" << std::endl; + std::cout << " -r, --ranked turn on ordering of outgroups. will root on first one present" << std::endl; + std::cout << " -u, --unroot unroot the tree" << std::endl; + std::cout << " -s, --silent do not error if outgroup(s) not found" << std::endl; + std::cout << " -o, --outf=FILE output tree file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxrr 1.3\n"; + vl += "Copyright (C) 2014-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim), Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"outgroups", required_argument, nullptr, 'g'}, + {"namesf", required_argument, nullptr, 'f'}, + {"ranked", no_argument, nullptr, 'r'}, + {"unroot", no_argument, nullptr, 'u'}, + {"outf", required_argument, nullptr, 'o'}, + {"silent", no_argument, nullptr, 's'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool outgroupsset = false; + bool namefileset = false; + bool outfileset = false; + bool silent = false; + bool unroot = false; + bool ranked = false; + std::vector outgroups; + + char * treef = nullptr; + char * outf = nullptr; + char * outgroupsc = nullptr; + char * namesfc = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:g:f:ruo:shVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + fileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'g': + outgroupsset = true; + outgroupsc = strdup(optarg); + break; + case 'f': + namefileset = true; + namesfc = strdup(optarg); + check_file_exists(namesfc); + break; + case 'r': + ranked = true; + break; + case 'u': + unroot = true; + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 's': + silent = true; + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + if (outgroupsset) { + std::vector tokens2; + tokenize(outgroupsc, tokens2, ","); + for (auto & tk : tokens2) { + trim_spaces(tk); // this will never have to be used, as spaces would break cmd line call + outgroups.push_back(tk); + } + } else if (namefileset) { + std::ifstream nfstr(namesfc); + std::string tline; + while (getline_safe(nfstr, tline)) { + trim_spaces(tline); + if (!tline.empty()) { + outgroups.push_back(tline); + } + } + nfstr.close(); + if (!outgroups.empty()) { + outgroupsset = true; + } else { + // empty file + std::cerr << "Error: no names found. Exiting." << std::endl; + exit(0); + } + } + if (!outgroupsset && !unroot) { + std::cerr << "Error: you need to set the outgroup (-g). Exiting." << std::endl; + exit(0); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (fileset) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + //read trees + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + bool going = true; + if (!unroot) { + if (ft == 0) { // Nexus + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + while (going) { + Tree * tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (tree != nullptr) { + if (has_root_edge(tree)) { + std::cerr << "Error: tree has a root edge, so rerooting is not possible" << std::endl; + std::cerr << "The root edge can be removed with the -r option of pxcltr" << std::endl; + std::cerr << "Exiting." << std::endl; + exit(0); + } + bool exists = false; + if (ranked) { + // find first outgroup present in tree + bool ogexists = false; + for (const auto & name : outgroups) { + if (check_name_against_tree(tree, name)) { + std::vector og; + og.push_back(name); + exists = reroot(tree, og, silent); + ogexists = true; + break; + } + } + // if no valid outgroups, let silent option figure out + if (!ogexists) { + exists = reroot(tree, outgroups, silent); + } + } else { + exists = reroot(tree, outgroups, silent); + } + if (!exists) { + std::cerr << "The outgroup taxa don't exist in this tree." << std::endl; + } else { + (*poos) << getNewickString(tree) << std::endl; + } + delete tree; + } + } + } else if (ft == 1) { // newick + while (going) { + Tree * tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (going) { + if (has_root_edge(tree)) { + std::cerr << "Error: tree has a root edge, so rerooting is not possible" << std::endl; + std::cerr << "The root edge can be removed with the -r option of pxcltr" << std::endl; + std::cerr << "Exiting." << std::endl; + exit(0); + } + bool exists = false; + if (ranked) { + // find first outgroup present in tree + bool ogexists = false; + for (const auto & name : outgroups) { + if (check_name_against_tree(tree, name)) { + std::vector og; + og.push_back(name); + exists = reroot(tree, og, silent); + ogexists = true; + break; + } + } + // if no valid outgroups, let silent option figure out + if (!ogexists) { + exists = reroot(tree, outgroups, silent); + } + } else { + exists = reroot(tree, outgroups, silent); + } + if (!exists) { + std::cerr << "The outgroup taxa don't exist in this tree." << std::endl; + } else { + (*poos) << getNewickString(tree) << std::endl; + } + delete tree; + } + } + } + } else { + // unroot trees + if (ft == 0) { + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + while (going) { + Tree * tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (tree != nullptr) { + if (has_root_edge(tree)) { + std::cerr << "Error: tree has a root edge, so rerooting is not possible" << std::endl; + std::cerr << "The root edge can be removed with the -r option of pxcltr" << std::endl; + std::cerr << "Exiting." << std::endl; + exit(0); + } + tree->unRoot(); + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } else if (ft == 1) { + while (going) { + Tree * tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (going) { + if (has_root_edge(tree)) { + std::cerr << "Error: tree has a root edge, so rerooting is not possible" << std::endl; + std::cerr << "The root edge can be removed with the -r option of pxcltr" << std::endl; + std::cerr << "Exiting." << std::endl; + exit(0); + } + tree->unRoot(); + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } + } + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_s2fa.cpp b/src/main_s2fa.cpp new file mode 100644 index 0000000..12e542c --- /dev/null +++ b/src/main_s2fa.cpp @@ -0,0 +1,181 @@ +#include +#include +#include +#include +#include +#include + +#include "utils.h" +#include "seq_reader.h" +#include "sequence.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Convert seqfiles from nexus, phylip, fastq to fasta." << std::endl; + std::cout << "Data can be read from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxs2fa [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -s, --seqf=FILE input sequence file, STDIN otherwise" << std::endl; + std::cout << " -u, --uppercase export characters in uppercase" << std::endl; + std::cout << " -o, --outf=FILE output sequence file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxs2fa 1.3\n"; + vl += "Copyright (C) 2013-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim), Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"outf", required_argument, nullptr, 'o'}, + {"uppercase", no_argument, nullptr, 'u'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool outfileset = false; + bool toupcase = false; + char * seqf = nullptr; + char * outf = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:o:uhVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'u': + toupcase = true; + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + Sequence seq; + std::string retstring; + int num_taxa = 0; + int num_char = 0; + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + int ft = test_seq_filetype_stream(*pios, retstring); + + // extra stuff to deal with possible interleaved nexus + if (ft == 0) { + bool interleave = false; + get_nexus_dimensions(*pios, num_taxa, num_char, interleave); + retstring = ""; // need to do this to let seqreader know we are mid-file + if (!interleave) { + while (read_next_seq_from_stream(*pios, ft, retstring, seq)) { + (*poos) << seq.get_fasta(toupcase); + } + } else { + std::vector seqs = read_interleaved_nexus(*pios, num_taxa, num_char); + for (auto & sq : seqs) { + (*poos) << sq.get_fasta(toupcase); + } + } + } else { + bool complicated_phylip = false; + // check if we are dealing with a complicated phylip format + if (ft == 1) { + get_phylip_dimensions(retstring, num_taxa, num_char); + complicated_phylip = is_complicated_phylip(*pios, num_char); + } + if (complicated_phylip) { + std::vector seqs = read_phylip(*pios, num_taxa, num_char); + for (auto & sq : seqs) { + (*poos) << sq.get_fasta(toupcase); + } + } else { + // fasta, fastq, or simple phylip + while (read_next_seq_from_stream(*pios, ft, retstring, seq)) { + (*poos) << seq.get_fasta(toupcase); + } + // fasta has a trailing one + if (ft == 2) { + (*poos) << seq.get_fasta(toupcase); + } + } + } + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} + diff --git a/src/main_s2nex.cpp b/src/main_s2nex.cpp new file mode 100644 index 0000000..e253e77 --- /dev/null +++ b/src/main_s2nex.cpp @@ -0,0 +1,178 @@ +#include +#include +#include +#include +#include +#include + +#include "utils.h" +#include "seq_reader.h" +#include "sequence.h" +#include "seq_utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Convert seqfiles from nexus, phylip, or fastq to nexus." << std::endl; + std::cout << "Can read from STDIN or file." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxs2nex [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << " -s, --seqf=FILE input sequence file, STDIN otherwise" << std::endl; + std::cout << " -u, --uppercase export characters in uppercase" << std::endl; + std::cout << " -o, --outf=FILE output sequence file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxs2nex 1.3\n"; + vl += "Copyright (C) 2013-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim), Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"outf", required_argument, nullptr, 'o'}, + {"uppercase", no_argument, nullptr, 'u'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool outfileset = false; + bool toupcase = false; + char * seqf = nullptr; + char * outf = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:o:uhVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'u': + toupcase = true; + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + std::vector seqs; + Sequence seq; + std::string retstring; + int num_taxa = 0; + int num_char = 0; + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + int ft = test_seq_filetype_stream(*pios, retstring); + // extra stuff to deal with possible interleaved nexus + // yes, nexus to nexus conversion is silly. but could go from interleaved to non-interleaved + if (ft == 0) { + bool interleave = false; + get_nexus_dimensions(*pios, num_taxa, num_char, interleave); + retstring = ""; // need to do this to let seqreader know we are mid-file + if (!interleave) { + while (read_next_seq_from_stream(*pios, ft, retstring, seq)) { + seqs.push_back(seq); + } + } else { + seqs = read_interleaved_nexus(*pios, num_taxa, num_char); + } + } else { + bool complicated_phylip = false; + // check if we are dealing with a complicated phylip format + if (ft == 1) { + get_phylip_dimensions(retstring, num_taxa, num_char); + complicated_phylip = is_complicated_phylip(*pios, num_char); + } + if (complicated_phylip) { + seqs = read_phylip(*pios, num_taxa, num_char); + } else { + // fasta, fastq, or simple phylip + while (read_next_seq_from_stream(*pios, ft, retstring, seq)) { + seqs.push_back(seq); + } + // fasta has a trailing one + if (ft == 2) { + seqs.push_back(seq); + } + } + + } + + write_nexus_alignment(seqs, toupcase, poos); + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_s2phy.cpp b/src/main_s2phy.cpp new file mode 100644 index 0000000..45e2924 --- /dev/null +++ b/src/main_s2phy.cpp @@ -0,0 +1,175 @@ +#include +#include +#include +#include +#include +#include + +#include "utils.h" +#include "seq_reader.h" +#include "sequence.h" +#include "seq_utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Convert seqfiles from nexus, phylip, or fastq to phylip." << std::endl; + std::cout << "Can read from STDIN or file." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxs2phy [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << " -s, --seqf=FILE input sequence file, STDIN otherwise" << std::endl; + std::cout << " -u, --uppercase export characters in uppercase" << std::endl; + std::cout << " -o, --outf=FILE output sequence file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxs2phy 1.3\n"; + vl += "Copyright (C) 2013-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim), Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"outf", required_argument, nullptr, 'o'}, + {"uppercase", no_argument, nullptr, 'u'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool outfileset = false; + bool toupcase = false; + char * seqf = nullptr; + char * outf = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:o:uhVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'u': + toupcase = true; + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + std::vector seqs; + Sequence seq; + std::string retstring; + int num_taxa = 0; + int num_char = 0; + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + int ft = test_seq_filetype_stream(*pios, retstring); + // extra stuff to deal with possible interleaved nexus + if (ft == 0) { + bool interleave = false; + get_nexus_dimensions(*pios, num_taxa, num_char, interleave); + retstring = ""; // need to do this to let seqreader know we are mid-file + if (!interleave) { + while (read_next_seq_from_stream(*pios, ft, retstring, seq)) { + seqs.push_back(seq); + } + } else { + seqs = read_interleaved_nexus(*pios, num_taxa, num_char); + } + } else { + bool complicated_phylip = false; + // check if we are dealing with a complicated phylip format + if (ft == 1) { + get_phylip_dimensions(retstring, num_taxa, num_char); + complicated_phylip = is_complicated_phylip(*pios, num_char); + } + if (complicated_phylip) { + seqs = read_phylip(*pios, num_taxa, num_char); + } else { + // fasta, fastq, or simple phylip + while (read_next_seq_from_stream(*pios, ft, retstring, seq)) { + seqs.push_back(seq); + } + // fasta has a trailing one + if (ft == 2) { + seqs.push_back(seq); + } + } + } + + write_phylip_alignment(seqs, toupcase, poos); + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_seqgen.cpp b/src/main_seqgen.cpp new file mode 100644 index 0000000..12612ec --- /dev/null +++ b/src/main_seqgen.cpp @@ -0,0 +1,430 @@ +#include +#include +#include +#include +#include +#include + +#include "seq_gen.h" +#include "utils.h" +#include "tree.h" +#include "tree_reader.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Basic sequence simulator under the GTR model." << std::endl; + std::cout << "This will take fasta, fastq, phylip, and nexus formats from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxseqgen [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input treefile, STDIN otherwise" << std::endl; + std::cout << " -l, --length=INT length of sequences to generate. default is 1000" << std::endl; + std::cout << " -b, --basef=Input comma-delimited base freqs in order: A,C,G,T. default is equal" << std::endl; + std::cout << " -g, --gamma=INT gamma shape value. default is no rate variation" << std::endl; + std::cout << " -i, --pinvar=FLOAT proportion of invariable sites. default is 0.0" << std::endl; + std::cout << " -r, --ratemat=Input comma-delimited input values for rate matrix. default is JC69" << std::endl; + std::cout << " order: A<->C,A<->G,A<->T,C<->G,C<->T,G<->T" << std::endl; + std::cout << " -w, --aaratemat=Input comma-delimited amino acid rate matrix. default is all freqs equal" << std::endl; + std::cout << " order is ARNDCQEGHILKMFPSTWYV" << std::endl; + std::cout << " -q, --aabasefreq=Input AA frequencies, order: ARNDCQEGHILKMFPSTWYV" << std::endl; + std::cout << " -c, --protein run as amino acid" << std::endl; + std::cout << " -n, --nreps=INT number of replicates" << std::endl; + std::cout << " -x, --seed=INT random number seed, clock otherwise" << std::endl; + std::cout << " -a, --ancestors print the ancestral node sequences. default is no" << std::endl; + std::cout << " use -p for the nodes labels" << std::endl; + std::cout << " -p, --printnodelabels print newick with internal node labels. default is no" << std::endl; + std::cout << " -m, --multimodel=Input specify multiple models across tree" << std::endl; + std::cout << " input is as follows:" << std::endl; + std::cout << " A<->C,A<->G,A<->T,C<->G,C<->T,G<->T,Node#,A<->C,A<->G,A<->T,C<->G,C<->T,G<->T" << std::endl; + std::cout << " EX:.3,.3,.3,.3,.3,1,.3,.3,.2,.5,.4" << std::endl; + std::cout << " -k, --rootseq=STRING set root sequence. default is random (from basefreqs)" << std::endl; + std::cout << " -o, --outf=FILE output seq file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxseqgen 1.3\n"; + vl += "Copyright (C) 2015-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph F. Walker, Joseph W. Brown, Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"outf", required_argument, nullptr, 'o'}, + {"length", required_argument, nullptr, 'l'}, + {"basef", required_argument, nullptr, 'b'}, + {"gamma", required_argument, nullptr, 'g'}, + {"pinvar", required_argument, nullptr, 'i'}, + {"ratemat", required_argument, nullptr, 'r'}, + {"aaratemat", required_argument, nullptr, 'w'}, + {"aabasef", required_argument, nullptr, 'q'}, + {"nreps", required_argument, nullptr, 'n'}, + {"seed", required_argument, nullptr, 'x'}, + {"ancestors", no_argument, nullptr, 'a'}, + {"printnodelabels", no_argument, nullptr, 'p'}, + {"protein", no_argument, nullptr, 'c'}, + {"multimodel", required_argument, nullptr, 'm'}, + {"rootseq", required_argument, nullptr, 'k'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool fileset = false; + bool printpost = false; + bool showancs = false; + bool is_dna = true; + float pinvar = 0.0; + double tot; + std::string yorn = "n"; + unsigned int seqlen = 1000; + int x = 0; + int pos = 0; + int pos2 = 0; + std::string infreqs; + std::string inrates; + std::string holdrates; + std::string ancseq; + char * outf = nullptr; + char * treef = nullptr; + std::vector diag(20, 0.0); + std::vector basefreq(4, 0.25); + std::vector aabasefreq(20, 0.05); + std::vector userrates; + std::vector multirates; + int nreps = 1; // not implemented at the moment + long int seed = -1; + int numpars = 0; + float alpha = -1.0; + std::vector< std::vector> dmatrix; + std::vector< std::vector > aa_rmatrix(20, std::vector(20, 1)); + for (unsigned int i = 0; i < aa_rmatrix.size(); i++) { + for (unsigned int j = 0; j < aa_rmatrix.size(); j++) { + if (i == j) { // Fill Diagonal + aa_rmatrix[i][j] = -19.0; + } + } + } + std::vector< std::vector > rmatrix(4, std::vector(4, 0.33)); + for (unsigned int i = 0; i < rmatrix.size(); i++) { + for (unsigned int j = 0; j < rmatrix.size(); j++) { + if (i == j) { // Fill Diagonal + rmatrix[i][j] = -0.99; + } + } + } + /*dmatrix = aa_rmatrix; + for (unsigned int i = 0; i < dmatrix.size(); i++) { + for (unsigned int j = 0; j < dmatrix.size(); j++) { + std::cout << dmatrix[i][j] << " "; + } + std::cout << "\n"; + vl += ""; + }*/ + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:o:l:b:g:i:r:w:q:n:x:apcm:k:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + fileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'b': + infreqs = strdup(optarg); + parse_comma_list(infreqs, basefreq); + if (basefreq.size() != 4) { + std::cerr << "Error: must provide 4 base frequencies (" << basefreq.size() + << " provided). Exiting." << std::endl; + exit(0); + } + if (!essentially_equal(sum(basefreq), 1.0)) { + std::cerr << "Error: base frequencies must sum to 1.0. Exiting." << std::endl; + exit(0); + } + break; + case 'l': + x = string_to_int(optarg, "-l"); + if (x < 0) { + std::cerr << "Error: Sequence length must be a positive integer. Exiting." + << std::endl; + exit(0); + } + seqlen = static_cast(x); + break; + case 'a': + showancs = true; + break; + case 'r': + inrates = strdup(optarg); + parse_comma_list(inrates, userrates); + + // NOTE: will have to alter this check for a.a., non-reversible, etc. + if (userrates.size() != 6) { + std::cerr << "Error: must provide 6 substitution parameters. " << + "Only " << userrates.size() << " provided. Exiting." << std::endl; + exit(0); + } + // NOTE: this uses order: A,T,C,G for matrix, but + // A<->C,A<->G,A<->T,C<->G,C<->T,G<->T for subst. params. + rmatrix[0][2] = userrates[0]; + rmatrix[2][0] = userrates[0]; + rmatrix[0][3] = userrates[1]; + rmatrix[3][0] = userrates[1]; + rmatrix[0][1] = userrates[2]; + rmatrix[1][0] = userrates[2]; + rmatrix[2][3] = userrates[3]; + rmatrix[3][2] = userrates[3]; + rmatrix[1][2] = userrates[4]; + rmatrix[2][1] = userrates[4]; + rmatrix[1][3] = userrates[5]; + rmatrix[3][1] = userrates[5]; + rmatrix[0][0] = (userrates[0]+userrates[1]+userrates[2]) * -1; + rmatrix[1][1] = (userrates[2]+userrates[4]+userrates[5]) * -1; + rmatrix[2][2] = (userrates[0]+userrates[3]+userrates[4]) * -1; + rmatrix[3][3] = (userrates[1]+userrates[3]+userrates[5]) * -1; + /*//Turn on to check matrix + for (unsigned int i = 0; i < rmatrix.size(); i++) { + for (unsigned int j = 0; j < rmatrix.size(); j++) { + std::cout << rmatrix[i][j] << " "; + } + std::cout << "\n"; + vl += ""; + }*/ + break; + case 'w': + inrates = strdup(optarg); + parse_comma_list(inrates, userrates); + is_dna = false; + + // NOTE: will have to alter this check for a.a., non-reversible, etc. + if (userrates.size() != 190) { + std::cerr << "Error: must provide 190 substitution parameters. "; + std::cerr << "I know its a stupidly large amount. " << + "Only " << userrates.size() << " provided. Exiting." << std::endl; + exit(0); + } + pos = 0; + pos2 = 1; + //Fill the Matrix + for (unsigned int i = 0; i < userrates.size(); i++) { + aa_rmatrix[pos][pos2] = userrates[i]; + aa_rmatrix[pos2][pos] = userrates[i]; + pos2++; + if (pos2 == 20) { + pos += 1; + pos2 = (pos + 1); + } + } + //Replace Diagonal + for (unsigned int i = 0; i < aa_rmatrix.size(); i++) { + for (unsigned int j = 0; j < aa_rmatrix.size(); j++) { + if (i != j) { + tot += aa_rmatrix[i][j]; + } + } + aa_rmatrix[i][i] = (tot*-1); + tot = 0.0; + } + /* + for (unsigned int i = 0; i < aa_rmatrix.size(); i++) { + for (unsigned int j = 0; j < aa_rmatrix.size(); j++) { + std::cout << aa_rmatrix[i][j] << " "; + } + std::cout << "\n"; + vl += ""; + }*/ + break; + case 'n': + nreps = string_to_int(optarg, "-n"); + break; + case 'x': + seed = string_to_long_int(optarg, "-x"); + break; + case 'q': + is_dna = false; + infreqs = strdup(optarg); + parse_comma_list(infreqs, aabasefreq); + if (aabasefreq.size() != 20) { + std::cerr << "Error: must provide 20 base frequencies (" << aabasefreq.size() + << " provided). Exiting." << std::endl; + exit(0); + } + if (!essentially_equal(sum(aabasefreq), 1.0)) { + std::cerr << "Error: base frequencies must sum to 1.0. Exiting." << std::endl; + exit(0); + } + break; + case 'g': + alpha = string_to_float(optarg, "-g"); + break; + case 'i': + pinvar = string_to_float(optarg, "-i"); + break; + case 'p': + printpost = true; + break; + case 'c': + is_dna = false; + break; + case 'm': + holdrates = strdup(optarg); + parse_comma_list(holdrates, multirates); + numpars = multirates.size(); + if ((numpars - 6) % 7 != 0) { + std::cerr << "Error: must provide 6 background substitution " + << "parameters and 7 values (1 node id + 6 subst. par.) " + << "for each piecewise model. Exiting." << std::endl; + exit(0); + } + break; + case 'k': + ancseq = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + if (is_dna) { + dmatrix = rmatrix; + } else { + dmatrix = aa_rmatrix; + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + if (fileset) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + + + /* + * Default Base Frequencies and Rate Matrix + * + */ + //vector basefreq(4, 0.0); + //basefreq[0] = .25; + //basefreq[1] = .25; + //basefreq[2] = .25; + //basefreq[3] = 1.0 - basefreq[0] - basefreq[1] - basefreq[2]; + /* + vector< vector > rmatrix(4, vector(4, 0.33)); + for (unsigned int i = 0; i < rmatrix.size(); i++) { + for (unsigned int j = 0; j < rmatrix.size(); j++) { + if (i == j) {//Fill Diagnol + rmatrix[i][j] = -1.0; + } + } + } + */ + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + + // allow > 1 tree in input. passing but not yet using nreps + int treeCounter = 0; + bool going = true; + if (ft == 1) { // newick. easy + while (going) { + Tree * tree = read_next_tree_from_stream_newick (*pios, retstring, &going); + if (tree != nullptr) { + //std::cout << "Working on tree #" << treeCounter << std::endl; + SequenceGenerator SGen(seqlen, basefreq, dmatrix, tree, showancs, + nreps, seed, alpha, pinvar, ancseq, printpost, multirates, aabasefreq, is_dna); + std::vector seqs = SGen.get_sequences(); + for (unsigned int i = 0; i < seqs.size(); i++) { + Sequence seq = seqs[i]; + (*poos) << ">" << seq.get_id() << std::endl; + //std::cout << "Here" << std::endl; + (*poos) << seq.get_sequence() << std::endl; + } + delete tree; + treeCounter++; + } + } + } else if (ft == 0) { // Nexus. need to worry about possible translation tables + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + while (going) { + Tree * tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (going) { + //std::cout << "Working on tree #" << treeCounter << std::endl; + SequenceGenerator SGen(seqlen, basefreq, dmatrix, tree, showancs, + nreps, seed, alpha, pinvar, ancseq, printpost, multirates, aabasefreq, is_dna); + std::vector seqs = SGen.get_sequences(); + for (unsigned int i = 0; i < seqs.size(); i++) { + Sequence seq = seqs[i]; + (*poos) << ">" << seq.get_id() << std::endl; + (*poos) << seq.get_sequence() << std::endl; + } + delete tree; + treeCounter++; + } + } + } + return EXIT_SUCCESS; +} diff --git a/src/main_ssort.cpp b/src/main_ssort.cpp new file mode 100644 index 0000000..093a60f --- /dev/null +++ b/src/main_ssort.cpp @@ -0,0 +1,178 @@ +#include +#include +#include +#include +#include +#include +#include + +#include "seq_reader.h" +#include "sequence.h" +#include "seq_utils.h" +#include "utils.h" +#include "log.h" +#include "edlib.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Sort sequences by id or length." << std::endl; + std::cout << "This will take fasta, phylip, and nexus formats from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxssort [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -s, --seqf=FILE input sequence file, STDIN otherwise" << std::endl; + std::cout << " -b, --sortby what to sort by: 1:id (default) 2:id rev" << std::endl; + std::cout << " 3:length (<) 4:length (>)" << std::endl; + std::cout << " -o, --outf=FILE output sequence file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxssort 1.3\n"; + vl += "Copyright (C) 2017-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim), Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"sortby", required_argument, nullptr, 'b'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +static struct SequenceIDListCompare { + bool operator()(const Sequence& lhs, const Sequence& rhs) { + return lhs.get_id() < rhs.get_id(); + } +} SequenceIDListCompare; + +static struct SequenceRevIDListCompare { + bool operator()(const Sequence& lhs, const Sequence& rhs) { + return lhs.get_id() > rhs.get_id(); + } +} SequenceRevIDListCompare; + +static struct SequenceLengthListCompare { + bool operator()(const Sequence& lhs, const Sequence& rhs) { + return lhs.get_sequence().length() < rhs.get_sequence().length(); + } +} SequenceLengthListCompare; + +static struct SequenceRevLengthListCompare { + bool operator()(const Sequence& lhs, const Sequence& rhs) { + return lhs.get_sequence().length() > rhs.get_sequence().length(); + } +} SequenceRevLengthListCompare; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool outfileset = false; + int sortby = 1; + char * seqf = nullptr; + char * outf = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:b:o:hgVC", long_options,&oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'b': + sortby = string_to_int(optarg, "-b"); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset&& outfileset) { + check_inout_streams_identical(seqf, outf); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios =&std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos =&std::cout; + } + + std::string alphaName; + std::vector seqs = ingest_alignment(pios, alphaName); + + if (sortby == 1) { + sort(seqs.begin(), seqs.end(), SequenceIDListCompare); + } else if (sortby == 2) { + sort(seqs.begin(), seqs.end(), SequenceRevIDListCompare); + } else if (sortby == 3) { + sort(seqs.begin(), seqs.end(), SequenceLengthListCompare); + } else if (sortby == 4) { + sort(seqs.begin(), seqs.end(), SequenceRevLengthListCompare); + } + for (auto & seq : seqs) { + (*poos) << seq.get_fasta(); + } + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_sstat.cpp b/src/main_sstat.cpp new file mode 100644 index 0000000..0685cd1 --- /dev/null +++ b/src/main_sstat.cpp @@ -0,0 +1,134 @@ +#include +#include +#include +#include +#include +#include +#include + +#include "sequence.h" +#include "seq_reader.h" +#include "utils.h" +#include "sstat.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Calculates multinomial alignment test statistics." << std::endl; + std::cout << "Currently only calculates the test statistic from Bollback (2002) MBE." << std::endl; + std::cout << "This will take fasta, fastq, phylip, and nexus formats from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxsstat [OPTIONS]... " << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -s, --seqf=FILE input seq file, STDIN otherwise" << std::endl; + std::cout << " -o, --outf=FILE output sequence file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxsstat 1.3\n"; + vl += "Copyright (C) 2017-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool fileset = false; + char * outf = nullptr; + char * seqf = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:o:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + + std::string alphaName; + std::vector seqs = ingest_alignment(pios, alphaName); + + MultinomialSeqStat mm(seqs); + (*poos) << mm.get_test_statistic() << std::endl; + + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_strec.cpp b/src/main_strec.cpp new file mode 100644 index 0000000..6f7700d --- /dev/null +++ b/src/main_strec.cpp @@ -0,0 +1,892 @@ +#include +#include +#include +#include +#include +#include + +#include "node.h" +#include "tree_reader.h" +#include "string_node_object.h" +#include "vector_node_object.h" +#include "tree.h" +#include "utils.h" +#include "sequence.h" +#include "seq_reader.h" +#include "state_reconstructor.h" +#include "rate_model.h" +#include "optimize_state_reconstructor_nlopt.h" +#include "optimize_state_reconstructor_periods_nlopt.h" +#include "tree_utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "This will conduct state reconstruction analyses." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxstrec [OPTIONS]... FILES" << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -d, --dataf=FILE input data file" << std::endl; + std::cout << " -w, --datawide data is in wide format so (001 instead of 2)" << std::endl; + std::cout << " -z, --dataz data is in probability format (0,1,0,0)" << std::endl; + std::cout << " -t, --treef=FILE input tree file" << std::endl; + std::cout << " -c, --conf=FILE configuration file" << std::endl; + std::cout << " -n, --outstnum=FILE output file for stochastic mapping number" << std::endl; + std::cout << " -a, --outstnumany=FILE output file for stochastic mapping number any" << std::endl; + std::cout << " -m, --outsttim=FILE output file for stochastic mapping duration" << std::endl; + std::cout << " -p, --periods=NUMS comma separated times" << std::endl; + std::cout << " -l, --logf=FILE log file, STOUT otherwise" << std::endl; + std::cout << " -o, --outanc=FILE output file for ancestral calc" << std::endl; + std::cout << " -s, --silent less verbose output (default: false)" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxstrec 1.3\n"; + vl += "Copyright (C) 2017-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"dataf", required_argument, nullptr, 'd'}, + {"datawide", no_argument, nullptr, 'w'}, + {"dataz", no_argument, nullptr, 'z'}, + {"treef", required_argument, nullptr, 't'}, + {"conf", required_argument, nullptr, 'c'}, + {"outanc", required_argument, nullptr, 'o'}, + {"outstnum", required_argument, nullptr, 'n'}, + {"outsttim", required_argument, nullptr, 'm'}, + {"outstnumany", required_argument, nullptr, 'a'}, + {"periods", required_argument, nullptr, 'p'}, + {"logf", required_argument, nullptr, 'l'}, + {"silent", no_argument, nullptr, 's'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +bool checkdata(Tree * intree, std::vector runseqs); +bool checkdata(Tree * intree, std::vector runseqs) { + //std::vector ret; // not used + std::set seqnames; + std::set treenames; + for (unsigned int i = 0; i < intree->getExternalNodeCount(); i++) { + treenames.insert(intree->getExternalNode(i)->getName()); + } + for (unsigned int i = 0; i < runseqs.size(); i++) { + seqnames.insert(runseqs[i].get_id()); + } + std::vector v(treenames.size()+seqnames.size()); + std::vector::iterator it; + it = set_difference (seqnames.begin(), seqnames.end(), treenames.begin(), treenames.end(), v.begin()); + if (int(it-v.begin()) > 0) { + std::cerr << "Error: there are " << int(it - v.begin()) + << " taxa that have the wrong names. Exiting." << std::endl; + exit(1); + } + for (it = v.begin(); it != v.end(); ++it) { + if ((*it).size() > 1) { + std::cout << *it << std::endl; + } + } + return seqnames == treenames; +} + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + //bool datafileset = false; // not used + //bool treefileset = false; // not used + bool conffileset = false; + bool logfileset = false; + bool outancfileset = false; + bool outstochtimefileset = false; + bool outstochnumfileset = false; + bool outstochnumanyfileset = false; + bool datawide = false; + bool periodsset = false; + bool dataz = false; //the datafile will have probabilities + bool silent = false; // opposite of original !silent variable + char * conff = nullptr; + char * treef = nullptr; + char * dataf = nullptr; + char * logf = nullptr; + char * outanc = nullptr; + char * outnum = nullptr; + char * outnumany = nullptr; + char * outtime = nullptr; + std::string periodstring; + std::vector ptokens; + std::vector period_times; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "d:t:c:o:n:m:a:l:p:hVwzC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 'd': + //datafileset = true; + dataf = strdup(optarg); + check_file_exists(dataf); + break; + case 'z': + dataz = true; + datawide = true; + break; + case 'w': + datawide = true; + break; + case 't': + //treefileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'c': + conffileset = true; + conff = strdup(optarg); + check_file_exists(conff); + break; + case 'o': + outancfileset = true; + outanc = strdup(optarg); + break; + case 'n': + outstochnumfileset = true; + outnum = strdup(optarg); + break; + case 'm': + outstochtimefileset = true; + outtime = strdup(optarg); + break; + case 'a': + outstochnumanyfileset = true; + outnumany = strdup(optarg); + break; + case 'p': + periodsset = true; + periodstring = (strdup(optarg)); + parse_comma_list(periodstring, period_times); + break; + case 'l': + logfileset = true; + logf = strdup(optarg); + break; + case 's': + silent = true; + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + std::ofstream * logout = nullptr; + std::ostream * loos = nullptr; + + if (logfileset) { + logout = new std::ofstream(logf); + loos = logout; + } else { + loos = &cout; + } + + if (!conffileset) { + std::cerr << "Error: you need to have a conf file. May change soon. Exiting." << std::endl; + print_help(); + exit(0); + } + + std::string outfile_stochnum_any; + std::string ratematrixfile; + std::vector > ratematrix; + bool estimate = true; + std::map > mrcas; + std::vector stochtime; + std::vector stochnumber; + std::vector stochnumber_any; + std::vector ancstates; + std::string freeparams = "_one_"; //right now, just _all_ or _one_ + + /************* + * read the configuration file + **************/ + std::ifstream ifs(conff); + std::string line; + std::vector tokens; + while (getline_safe(ifs, line)) { + if (line.size() > 1) { + if (strcmp( (&line[0]), "#") != 0) { + //if ((&line[0]) != "#") { + std::string del("="); + tokens.clear(); + tokenize(line, tokens, del); + for (unsigned int j = 0; j < tokens.size(); j++) { + trim_spaces(tokens[j]); + } + if (!strcmp(tokens[0].c_str(), "freeparams")) { + freeparams = tokens[1]; + } else if (!strcmp(tokens[0].c_str(), "outstnum_any")) { + outfile_stochnum_any = tokens[1]; + } else if (!strcmp(tokens[0].c_str(), "ratematrix")) { + ratematrixfile = tokens[1]; + if (ratematrixfile == "d" || ratematrixfile == "D") { + ratematrixfile = ""; + } + estimate =false; + } else if (!strcmp(tokens[0].c_str(), "mrca")) { + /* + * need to make sure that the mrca exist in the tree, + * that the names are correct + */ + std::vector searchtokens; + tokenize(tokens[1], searchtokens, ", "); + for (unsigned int j = 0; j < searchtokens.size(); j++) { + trim_spaces(searchtokens[j]); + } + std::vector mrc; + for (unsigned int j = 1; j < searchtokens.size(); j++) { + mrc.push_back(searchtokens[j]); + } + mrcas[searchtokens[0]] = mrc; + } else if (!strcmp(tokens[0].c_str(), "stochtime")) { + std::vector searchtokens; + tokenize(tokens[1], searchtokens, ", "); + for (unsigned int j = 0; j < searchtokens.size(); j++) { + trim_spaces(searchtokens[j]); + stochtime.push_back(searchtokens[j]); + } + } else if (!strcmp(tokens[0].c_str(), "stochnumber")) { + std::vector searchtokens; + tokenize(tokens[1], searchtokens, ", "); + for (unsigned int j = 0; j < searchtokens.size(); j++) { + trim_spaces(searchtokens[j]); + stochnumber.push_back(searchtokens[j]); + } + } else if (!strcmp(tokens[0].c_str(), "stochnumber_any")) { + std::vector searchtokens; + tokenize(tokens[1], searchtokens, ", "); + for (unsigned int j = 0; j < searchtokens.size(); j++) { + trim_spaces(searchtokens[j]); + stochnumber_any.push_back(searchtokens[j]); + } + } else if (!strcmp(tokens[0].c_str(), "ancstates")) { + std::vector searchtokens; + tokenize(tokens[1], searchtokens, ", "); + for (unsigned int j = 0; j < searchtokens.size(); j++) { + trim_spaces(searchtokens[j]); + ancstates.push_back(searchtokens[j]); + } + } + } + } + } + if (!silent) { + (*loos) << "finished reading config file" << std::endl; + } + /** + * read the data file + */ + + std::vector seqs; + Sequence seq; + std::ifstream * fstr = new std::ifstream(dataf); + std::istream * pios = fstr; + line = ""; + int ft = test_seq_filetype_stream(*pios, line); + while (read_next_seq_from_stream(*pios, ft, line, seq)) { + //(*loos) << seq.get_sequence() << std::endl; + seqs.push_back(seq); + } + //fasta has a trailing one + if (ft == 2) { + seqs.push_back(seq); + } + if (!silent) { + (*loos) << "taxa: " << seqs.size() << std::endl; + } + + /** + * read the tree file + */ + TreeReader tr; + std::vector trees; + std::ifstream infile2(treef); + if (!infile2) { + std::cerr << "Error: could not open treefile. Exiting." << std::endl; + exit(1); + } + line = ""; + while (getline_safe(infile2, line)) { + if (line.length() > 5) { + trees.push_back(tr.readTree(line)); + } + } + infile2.close(); + if (!silent) { + (*loos) << "trees: " << trees.size() << std::endl; + } + + /** + * process the data + * datawide means + * + * NOT datawide means + */ + int nstates; + int nsites; + if (datawide) { + if (!dataz) { + nstates = seqs[0].get_length(); + } else { + std::vector searchtokens; + tokenize(seqs[0].get_sequence(), searchtokens, ","); + nstates = searchtokens.size(); + } + nsites = 1; + } else { + int maxstate=1; + std::vector searchtokens; + tokenize(seqs[0].get_sequence(), searchtokens, " "); + for (unsigned int j = 0; j < searchtokens.size(); j++) { + trim_spaces(searchtokens[j]); + } + nsites = searchtokens.size(); + if (!silent) { + (*loos) << "nsites: " << nsites << std::endl; + } + for (unsigned int se = 0;se (); + tokenize(seqs[se].get_sequence(), searchtokens, " "); + for (unsigned int j = 0; j < searchtokens.size(); j++) { + trim_spaces(searchtokens[j]); + int pos = std::atoi(searchtokens[j].c_str()); + if (pos > maxstate) { + maxstate = pos; + } + } + } + nstates = maxstate + 1; // TODO this can be determined by largest number +1 + } + if (!silent) { + (*loos) << "total number of states in dataset: " << nstates << std::endl; + } + //reading ratematrixfile + if (ratematrixfile.size() > 1) { + ratematrix = processRateMatrixConfigFile(ratematrixfile, nstates); + } + //end ratematrixfile + std::ofstream ancout; + std::ofstream stnumout; + std::ofstream sttimeout; + std::ofstream sttnumout_any; + + if (!ancstates.empty() && outancfileset) { + ancout.open(outanc, std::ios::out); + ancout << "site\ttree\tMRCA\tlnL"; + for (int i = 0; i < nstates; i++) { + ancout << "\tstate_" << i+1; + } + ancout << std::endl; + } + if (!stochnumber.empty() && outstochnumfileset) { + stnumout.open(outnum, std::ios::out); + stnumout << "site\ttree\tMRCA\tlnL"; + for (int i = 0; i < nstates; i++) { + for (int j = 0; j < nstates; j++) { + if (i != j) { + stnumout << "\tstate_" << i+1 << "->state_" << j+1; + } + } + } + stnumout << std::endl; + } + if (!stochtime.empty() && outstochtimefileset ) { + sttimeout.open(outtime, std::ios::out); + sttimeout << "site\ttree\tMRCA\tlnL"; + for (int i = 0; i < nstates; i++) { + sttimeout << "\tstate_" << i+1; + } + sttimeout << std::endl; + } + if (!stochnumber_any.empty() && outstochnumanyfileset) { + sttnumout_any.open(outnumany, std::ios::out); + sttnumout_any << "site\ttree\tMRCA\tlnL"; + sttnumout_any << "\tanystate"; + sttnumout_any << std::endl; + } + + for (int n = 0; n < nsites; n++) { + (*loos) << "site: " << n+1 << std::endl; + /* + * this converts the data and is a little long to accomodate datasets + * with sites that don't have all the states but the results can still + * be printed to the same outfile for analysis after + */ + //need to put the data into a wide view + std::vector runseqs; + int nstates_site_n; + std::vector existing_states(nstates, 0); + if (!datawide) { + for (unsigned int se = 0;se searchtokens; + tokenize(seqs[se].get_sequence(), searchtokens, " "); + for (unsigned int j = 0; j < searchtokens.size(); j++) { + trim_spaces(searchtokens[j]); + } + std::string tseqs(nstates, '0'); + if (searchtokens[n]=="?") { + for (int mse = 0; mse < nstates; mse++) { + tseqs.replace(mse, 1, "1"); + } + } else { + int pos = std::atoi(searchtokens[n].c_str()); + tseqs.replace(pos, 1, "1"); + } + for (int i = 0; i < nstates; i++) { + if (tseqs.at(i) == '1') { + existing_states[i] = 1; + } + } + Sequence tse = Sequence(seqs[se].get_id(), tseqs, true); + runseqs.push_back(tse); + } + nstates_site_n = sum(existing_states); + } else { + runseqs = seqs; + if (!dataz) { + for (unsigned int se=0; se < seqs.size(); se++) { + for (int i = 0; i < nstates; i++) { + if (seqs[se].get_sequence().at(i) == '1') { + existing_states[i] = 1; + } + } + } + nstates_site_n = sum(existing_states); + } else { + for (int i = 0; i < nstates; i++) { + existing_states[i] = 1; + } + nstates_site_n = nstates; + } + } + //mapping the existing states to the full states + //int statecnt = 0; // not used + for (int i=nstates-1; i >= 0; i--) { + if (existing_states[i] == 1) { + continue; + } else { + for (unsigned int se=0; se < runseqs.size(); se++) { + runseqs[se].set_sequence(runseqs[se].get_sequence().erase(i, 1)); + } + } + } + + if (!silent) { + (*loos) << "states: " << nstates_site_n << std::endl; + (*loos) << "trees: "; + } + for (unsigned int i = 0; i < trees.size(); i++) { + if (!silent) { + (*loos) << i << std::endl; + } + std::vector rms; + RateModel rm(nstates_site_n); + StateReconstructor sr(rm, rms); + rm.setup_P(0.1, false); + if (periodsset) { + rms.push_back(rm); + for (unsigned int p=1; p < period_times.size(); p++) { + RateModel rm2(nstates_site_n); + rm2.setup_P(0.1, false); + rms.push_back(rm2); + } + sr.set_periods(period_times, rms); + } + sr.set_store_p_matrices(false); + Tree * tree = trees[i]; + if (!silent) { + (*loos) << "tips: " << tree->getExternalNodeCount() << std::endl; + } + sr.set_tree(tree); + if (periodsset) { + sr.set_periods_model(); + } + //checking that the data and the tree have the same names + if (checkdata(tree, runseqs) == 0) { + exit(0); + } + bool same; + if (!dataz) { + same = sr.set_tip_conditionals(runseqs); + } else { + same = sr.set_tip_conditionals_already_given(runseqs); + } + if (same) { + (*loos) << "skipping calculation" << std::endl; + continue; + } + double finallike; + Superdouble totlike_sd; + if (!periodsset) { + mat free_var(nstates_site_n, nstates_site_n); + free_var.fill(0); + int ct = 0; + if (freeparams == "_one_") { + ct = 1; + } else if (freeparams == "_all_") { + ct = 0; + for (int k = 0; k < nstates_site_n; k++) { + for (int j = 0; j < nstates_site_n; j++) { + if (k != j) { + free_var(k, j) = ct; + ct += 1; + } + } + } + } + if (!silent) { + (*loos) << free_var << std::endl; + (*loos) << ct << std::endl; + } + rm.neg_p = false; + std::cout << "likelihood: " << sr.eval_likelihood() << std::endl; + //estimating the optimal rates + if (estimate) {//optimize + optimize_sr_nlopt(&rm, &sr, &free_var, ct); + } else { // requires that the ratematrix is available + for (int i = 0; i < nstates_site_n; i++) { + for (int j = 0; j < nstates_site_n; j++) { + free_var(i, j) = ratematrix[i][j]; + } + } + } + //end estimating + if (!silent) { + (*loos) << free_var << std::endl; + } + rm.setup_Q(free_var); + sr.set_store_p_matrices(true); + finallike = sr.eval_likelihood(); + if (!silent) { + (*loos) << "final_likelihood: " << finallike << std::endl; + } + } else { //optimize with periods + std::vector periods_free_var(period_times.size()); + int ct = 0; + if (freeparams == "_one_") { + ct = 1; + for (unsigned int s=0; s < period_times.size(); s++) { + mat free_var(nstates_site_n, nstates_site_n); + free_var.fill(0); + periods_free_var[s] = free_var; + } + } else if (freeparams == "_all_") { + ct = 0; + for (unsigned int s=0; s < period_times.size(); s++) { + mat free_var(nstates_site_n, nstates_site_n); + free_var.fill(0); + for (int k = 0; k < nstates_site_n; k++) { + for (int j = 0; j < nstates_site_n; j++) { + if (k != j) { + free_var(k, j) = ct; + ct += 1; + } + } + } + periods_free_var[s] = free_var; + } + } + if (!silent) { + for (unsigned int s=0; s < period_times.size(); s++) { + (*loos) << periods_free_var[s] << std::endl; + } + (*loos) << ct << std::endl; + } + rm.neg_p = false; + std::cout << "likelihood: " << sr.eval_likelihood() << std::endl; + optimize_sr_periods_nlopt(&rms, &sr, &periods_free_var, ct); + if (!silent) { + for (unsigned int s=0; s < period_times.size(); s++) { + (*loos) << periods_free_var[s] << std::endl; + } + (*loos) << ct << std::endl; + std::cout << "////////////////////////" << std::endl; + } + for (unsigned int s=0; s < period_times.size(); s++) { + rms[s].setup_Q(periods_free_var[s]); + } + sr.set_store_p_matrices(true); + finallike = sr.eval_likelihood(); + if (!silent) { + (*loos) << "final_likelihood: " << finallike << std::endl; + } + std::cout << "period set and so no ancestral states just yet" << std::endl; + continue; + } + if (!silent) { + (*loos) << "ancestral states" << std::endl; + } + sr.prepare_ancstate_reverse(); + for (unsigned int j = 0; j < ancstates.size(); j++) { + if (ancstates[j] == "_all_") { + std::vector lhoods; + for (unsigned int l = 0; l < tree->getInternalNodeCount(); l++) { + lhoods = sr.calculate_ancstate_reverse_sd(*tree->getInternalNode(l)); + totlike_sd = calculate_vector_Superdouble_sum(lhoods); + + //bool neg = false; // not used + int excount = 0; + double highest = 0; + int high = 0; + for (int k = 0; k < nstates; k++) { + if (existing_states[k] == 1) { + if (double(lhoods[excount]/totlike_sd) > highest) { + highest= double(lhoods[excount]/totlike_sd); + high = k; + } + excount += 1; + } + } + std::string s; + std::stringstream out; + out << high; + tree->getInternalNode(l)->setName(out.str()); + } + ancout << getNewickString(tree) << std::endl; + } else { + std::vector lhoods; + if (!silent) { + (*loos) << "node: " << tree->getMRCA(mrcas[ancstates[j]])->getName() + << "\tmrca: " << ancstates[j] << std::endl; + } + ancout << n+1 << "\t" << i+1 << "\t" << ancstates[j] << "\t" << finallike; + lhoods = sr.calculate_ancstate_reverse_sd(*tree->getMRCA(mrcas[ancstates[j]])); + totlike_sd = calculate_vector_Superdouble_sum(lhoods); + bool neg = false; + int excount = 0; + for (int k = 0; k < nstates; k++) { + if (existing_states[k] == 1) { + if (!silent) { + (*loos) << double(lhoods[excount]/totlike_sd) << " "; //"(" << lhoods[excount] << ") "; + } + ancout << "\t" << double(lhoods[excount]/totlike_sd); + if (double(lhoods[excount]/totlike_sd) < 0) + neg = true; + excount += 1; + } else { + if (!silent) { + (*loos) << "NA" << " "; + ancout << "\t" << "NA"; + } + } + } + if (neg) { + exit(0); + } + ancout << std::endl; + if (!silent) { + (*loos) << std::endl; + } + } + } + if (!silent) { + (*loos) << std::endl; + (*loos) << "stochastic time" << std::endl; + } + + for (unsigned int j = 0; j < stochtime.size(); j++) { + if (!tree->getMRCA(mrcas[stochtime[j]])->isRoot()) { + //std::vector lhoods; // not used + if (!silent) { + (*loos) << "mrca: " << stochtime[j] << std::endl; + } + sttimeout << n+1 << "\t" << i+1 << "\t" << stochtime[j]<< "\t" << finallike; + bool neg = false; + int excount = 0; + for (int k = 0; k < nstates; k++) { + if (existing_states[k]==1) { + sr.prepare_stochmap_reverse_all_nodes(excount, excount); + sr.prepare_ancstate_reverse(); + std::vector stoch; + stoch = sr.calculate_reverse_stochmap(*tree->getMRCA(mrcas[stochtime[j]]), true); + double tnum = sum(stoch)/double(totlike_sd); + double bl = tree->getMRCA(mrcas[stochtime[j]])->getBL(); + if (!silent) { + (*loos) << tnum << " "; + } + sttimeout << "\t" << tnum/bl; + if (tnum < 0) { + neg = true; + } + excount += 1; + } else { + if (!silent) { + (*loos) << "NA" << " "; + } + sttimeout << "\t" << "NA"; + } + + } + sttimeout << std::endl; + if (!silent) { + (*loos) << std::endl; + } + if (neg) { + exit(0); + } + } + } + if (!silent) { + (*loos) << std::endl; + (*loos) << "stochastic number" << std::endl; + } + for (unsigned int j = 0; j < stochnumber.size(); j++) { + if (!tree->getMRCA(mrcas[stochnumber[j]])->isRoot()) { + //std::vector lhoods; // not used + if (!silent) { + (*loos) << "mrca: " << stochnumber[j] << std::endl; + } + stnumout << n+1 << "\t" << i+1 << "\t" << stochnumber[j]<< "\t" << finallike; + bool neg = false; + int excount = 0; + for (int k = 0; k < nstates; k++) { + if (existing_states[k]==1) { + int excount2 = 0; + for (int l = 0; l < nstates; l++) { + if (existing_states[l] == 1) { + if (k == l) { + if (!silent) { + (*loos) << " - "; + } + } else { + sr.prepare_stochmap_reverse_all_nodes(excount, excount2); + sr.prepare_ancstate_reverse(); + std::vector stoch; + stoch = sr.calculate_reverse_stochmap(*tree->getMRCA(mrcas[stochnumber[j]]), + false); + double tnum = sum(stoch)/totlike_sd; + if (!silent) { + (*loos) << tnum << " "; + } + stnumout << "\t" << tnum; + if (tnum < 0) { + neg = true; + } + } + excount2 += 1; + } else { + if (!silent) { + (*loos) << "NA" << " "; + } + stnumout << "\t" << "NA"; + } + } + if (!silent) { + (*loos) << std::endl; + } + excount += 1; + } else { + for (int l = 0; l < nstates; l++) { + if (k == l) { + if (!silent) { + (*loos) << " - "; + } + } else { + if (!silent) { + (*loos) << "NA" << " "; + } + stnumout << "\t" << "NA"; + } + } + if (!silent) { + (*loos) << std::endl; + } + } + } + stnumout << std::endl; + if (!silent) { + (*loos) << std::endl; + } + if (neg) { + exit(0); + } + } + } + if (!silent) { + (*loos) << std::endl; + } + if (!silent) { + (*loos) << "stochastic number (any)" << std::endl; + } + if (!stochnumber_any.empty()) { + sr.prepare_stochmap_reverse_all_nodes_all_matrices(); + sr.prepare_ancstate_reverse(); + } + for (unsigned int j = 0; j < stochnumber_any.size(); j++) { + if (!tree->getMRCA(mrcas[stochnumber_any[j]])->isRoot()) { + //std::vector lhoods; // not used + std::vector stoch; + if (!silent) { + (*loos) << "node: " << tree->getMRCA(mrcas[stochnumber_any[j]])->getName() + << " mrca: " << stochnumber_any[j] << std::endl; + } + sttnumout_any << n+1 << "\t" << i+1 << "\t" << stochnumber_any[j]<< "\t" << finallike; + stoch = sr.calculate_reverse_stochmap(*tree->getMRCA(mrcas[stochnumber_any[j]]), false); + double tnum = sum(stoch)/totlike_sd; + //(*loos) << sum(stoch) << " " << totlike << std::endl; + if (!silent) { + (*loos) << tnum << " "; + } + sttnumout_any << "\t" << tnum; + sttnumout_any << std::endl; + if (!silent) { + (*loos) << std::endl; + } + } + } + + //delete tree; + } + } + if (!ancstates.empty() && outancfileset) { + ancout.close(); + } + if (!stochnumber.empty()) { + stnumout.close(); + } + if (!stochtime.empty()) { + sttimeout.close(); + } + + if (logfileset) { + logout->close(); + delete loos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_sw.cpp b/src/main_sw.cpp new file mode 100644 index 0000000..51dd38a --- /dev/null +++ b/src/main_sw.cpp @@ -0,0 +1,225 @@ +#include +#include +#include +#include +#include +#include + +#ifdef OMP +#include +#endif + +#include "utils.h" +#include "seq_reader.h" +#include "sequence.h" +#include "seq_utils.h" +#include "seq_models.h" +#include "pairwise_alignment.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Conduct Smith-Waterman analysis for all the seqs in a file." << std::endl; + std::cout << "This will take fasta, fastq, phylip, and nexus formats from a file or STDIN." << std::endl; + std::cout << "Output is a list of the scores and distances (and the alignments if asked)." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxsw [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -s, --seqf=FILE input sequence file, STDIN otherwise" << std::endl; + std::cout << " -a, --outalnf=FILE output sequence file, won't output otherwise" << std::endl; + std::cout << " -t, --seqtype=INT sequence type, default=DNA (DNA=0,AA=1)" << std::endl; + std::cout << " -m, --matrix=FILE scoring matrix, default DNA=EDNAFULL, AA=BLOSUM62" << std::endl; + std::cout << " -n, --nthreads=INT number of threads (open mp), default=2" << std::endl; + std::cout << " -v, --verbose make the output more verbose, turns off parallel" << std::endl; + std::cout << " -o, --outf=FILE output score/distance file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxsw 1.3\n"; + vl += "Copyright (C) 2013-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"outf", required_argument, nullptr, 'o'}, + {"outalnf", required_argument, nullptr, 'a'}, + {"seqtype", required_argument, nullptr, 't'}, + {"matrix", required_argument, nullptr, 'm'}, + {"nthreads", required_argument, nullptr, 'n'}, + {"verbose", no_argument, nullptr, 'v'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool outfileset = false; + bool outalnfileset = false; + bool matrixfileset = false; + char * seqf = nullptr; + char * outf = nullptr; + char * outaf = nullptr; + char * matf = nullptr; + int seqtype = 0; // DNA default, 1 = aa + int num_threads = 2; // DNA default, 1 = aa + bool verbose = false; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:o:a:t:m:n:vhVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'a': + outalnfileset = true; + outaf = strdup(optarg); + break; + case 't': + seqtype = string_to_int(optarg, "-t"); + if (seqtype > 1) { + std::cerr << "Don't recognize seqtype " << seqtype + << ". Must be 0 (DNA) or 1 (AA)." << std::endl; + exit(0); + } + break; + case 'm': + matrixfileset = true; + matf = strdup(optarg); + check_file_exists(matf); + break; + case 'n': + num_threads = string_to_int(optarg, "-n"); + break; + case 'v': + verbose = true; + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + std::cout << get_SW_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + std::map > sc_mat; + if (matrixfileset) { + read_scoring_matrix(matf, sc_mat); + } else { + if (seqtype == 0) { + get_ednafull(sc_mat); + } else { //aa + + // *** what is supposed to go here? *** + + } + } + Sequence seq; + std::string retstring; + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + std::ofstream * afstr = nullptr; + + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + if (outalnfileset) { + afstr = new std::ofstream(outaf); + } + + std::string alphaName; + std::vector seqs = ingest_alignment(pios, alphaName); + + // go all by all + for (unsigned int i = 0; i < seqs.size(); i++) { +#ifdef OMP + omp_set_num_threads(num_threads); +#endif + #pragma omp parallel for + for (unsigned int j = 0; j < seqs.size(); j++) { + if (j > i) { + std::string aln1; + std::string aln2; + double sc = sw(seqs[i], seqs[j], sc_mat, 0, aln1, aln2); + #pragma omp critical + { + (*poos) << seqs[i].get_id() << "\t" << seqs[j].get_id() + << "\t" << sc << std::endl; + if (verbose) { + std::cout << seqs[i].get_id() << "\t" << aln1 << "\n" + << seqs[j].get_id() << "\t" << aln2 << std::endl; + } + if (outalnfileset) { + (*afstr) << seqs[i].get_id() << "\t" << aln1 << "\n" + << seqs[j].get_id() << "\t" << aln2 << std::endl; + } + } + } + } + } + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + if (outalnfileset) { + afstr->close(); + delete afstr; + } + return EXIT_SUCCESS; +} diff --git a/src/main_t2new.cpp b/src/main_t2new.cpp new file mode 100644 index 0000000..1fbf685 --- /dev/null +++ b/src/main_t2new.cpp @@ -0,0 +1,163 @@ +#include +#include +#include +#include +#include +#include +#include + +#include "tree.h" +#include "tree_reader.h" +#include "utils.h" +#include "tree_utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "This will convert a tree file to newick." << std::endl; + std::cout << "This will take a newick- or nexus-formatted tree from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxt2new [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input tree file, STDIN otherwise" << std::endl; + std::cout << " -o, --outf=FILE output tree file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxt2new 1.3\n"; + vl += "Copyright (C) 2014-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool outfileset = false; + char * treef = nullptr; + char * outf = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:o:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + fileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (fileset ) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + //read trees + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + + if (ft == 0) { + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + bool going = true; + while (going) { + Tree * tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (going) { + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } else if (ft == 1) { + // newick. just return original tree + bool going = true; + while (going) { + Tree * tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (going) { + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } else { + std::cerr << "Error: tree format not recognized. Exiting." << std::endl; + exit(1); + } + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_t2nex.cpp b/src/main_t2nex.cpp new file mode 100644 index 0000000..7532ae1 --- /dev/null +++ b/src/main_t2nex.cpp @@ -0,0 +1,183 @@ +#include +#include +#include +#include +#include +#include +#include + +#include "tree.h" +#include "tree_reader.h" +#include "utils.h" +#include "tree_utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "This will convert a tree file to vanilla Nexus format." << std::endl; + std::cout << "This will take a newick- or nexus-formatted tree from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxt2nex [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input tree file, STDIN otherwise" << std::endl; + std::cout << " -o, --outf=FILE output tree file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxt2nex 1.3\n"; + vl += "Copyright (C) 2021-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown, Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool outfileset = false; + char * treef = nullptr; + char * outf = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:o:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + fileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (fileset ) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + //read trees + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + + int treeCounter = 0; + bool going = true; + + if (ft == 1) { + while (going) { + Tree * tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (tree != nullptr) { + if (treeCounter == 0) { + (*poos) << "#NEXUS" << std::endl << "Begin trees;" << std::endl; + } + if (is_rooted(tree)) { + (*poos) << "tree tree" << treeCounter << " = [&R] " + << getNexusString(tree) << std::endl; + } else { + (*poos) << "tree tree" << treeCounter << " = [&U] " + << getNexusString(tree) << std::endl; + } + treeCounter++; + } + } + (*poos) << "end;" << std::endl; + } else if (ft == 0) { // Nexus. need to worry about possible translation tables + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + while (going) { + Tree * tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (tree != nullptr) { + if (treeCounter == 0) { + (*poos) << "#NEXUS" << std::endl << "Begin trees;" << std::endl; + } + if (is_rooted(tree)) { + (*poos) << "tree tree" << treeCounter << " = [&R] " + << getNexusString(tree) << std::endl; + } else { + (*poos) << "tree tree" << treeCounter << " = [&U] " + << getNexusString(tree) << std::endl; + } + treeCounter++; + } + } + (*poos) << "end;" << std::endl; + } else { + std::cerr << "Error: tree format not recognized. Exiting." << std::endl; + exit(1); + } + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_tcol.cpp b/src/main_tcol.cpp new file mode 100644 index 0000000..0bd1dd6 --- /dev/null +++ b/src/main_tcol.cpp @@ -0,0 +1,231 @@ +#include +#include +#include +#include +#include +#include +#include + +#include "utils.h" +#include "tree_reader.h" +#include "tree_utils.h" +#include "log.h" +#include "aa2cdn.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Add information to a tree so that you can color the edges." << std::endl; + std::cout << "This will take nexus and newick inputs from a file or STDIN." << std::endl; + std::cout << "Results are written in nexus format so that it can be read by figtree." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxtcol [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input tree file, STDIN otherwise" << std::endl; + std::cout << " -m, --mrcaf=FILE file with mrcas and annotations, tab separated" << std::endl; + std::cout << " -d, --nodeidf=FILE file with nodeids (labels) and annotations, tab separated" << std::endl; + std::cout << " -o, --outf=FILE output file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxtcol 1.3\n"; + vl += "Copyright (C) 2016-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"mrcaf", required_argument, nullptr, 's'}, + {"nodeidf", required_argument, nullptr, 'r'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool tfileset = false; + + // hrm add this back in? + //bool mrcafset = false; not used + //char * mrcaf = nullptr; + + bool nodeidfset = false; + char * nodeidf = nullptr; + char * outf = nullptr; + char * treef = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:m:d:o:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + tfileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'm': + //mrcafset = true; + //mrcaf = strdup(optarg); + break; + case 'd': + nodeidfset = true; + nodeidf = strdup(optarg); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (tfileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (tfileset) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + //for node ids + std::map nodeid_map; + if (nodeidfset) { + std::ifstream nfstr(nodeidf); + std::string tline; + while (getline_safe(nfstr, tline)) { + trim_spaces(tline); + if (tline.empty()) { + continue; + } + std::vector tokens2; + tokenize(tline, tokens2, "\t"); + for (auto & tk : tokens2) { + trim_spaces(tk); + } + if (tokens2.size() != 2) { + continue; + } + nodeid_map[tokens2[0]] = tokens2[1]; + } + nfstr.close(); + } + + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + bool going = true; + if (ft == 1) { + Tree * tree; + (*poos) << "#NEXUS" << std::endl; + (*poos) << "begin trees;" << std::endl; + while (going) { + tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (going) { + for (unsigned int i = 0; i < tree->getInternalNodeCount(); i++) { + Node * tnode = tree->getInternalNode(i); + if (nodeid_map.find(tnode->getName()) != nodeid_map.end()) { + tnode->setName("[&name=\""+tnode->getName()+"\",ann="+nodeid_map[tnode->getName()]+"]"); + } + } + for (unsigned int i = 0; i < tree->getExternalNodeCount(); i++) { + Node * tnode = tree->getExternalNode(i); + if (nodeid_map.find(tnode->getName()) != nodeid_map.end()) { + tnode->setName(tnode->getName()+"[&ann="+nodeid_map[tnode->getName()]+"]"); + } + } + // put annotations here + (*poos) << "tree tree = " << getNewickString(tree) << std::endl; + delete tree; + } + } + (*poos) << "end;" << std::endl; + } else if (ft == 0) { // Nexus. need to worry about possible translation tables + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + Tree * tree; + (*poos) << "#NEXUS" << std::endl; + (*poos) << "begin trees;" << std::endl; + while (going) { + tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (tree != nullptr) { + for (unsigned int i = 0; i < tree->getInternalNodeCount(); i++) { + Node * tnode = tree->getInternalNode(i); + if (nodeid_map.find(tnode->getName()) != nodeid_map.end()) { + tnode->setName("[&name=\""+tnode->getName()+"\",ann="+nodeid_map[tnode->getName()]+"]"); + } + } + for (unsigned int i = 0; i < tree->getExternalNodeCount(); i++) { + Node * tnode = tree->getExternalNode(i); + if (nodeid_map.find(tnode->getName()) != nodeid_map.end()) { + tnode->setName(tnode->getName()+"[&ann="+nodeid_map[tnode->getName()]+"]"); + } + } + // put annotations here + (*poos) << "tree tree = " << getNewickString(tree) << std::endl; + delete tree; + } + } + } + + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_tcomb.cpp b/src/main_tcomb.cpp new file mode 100644 index 0000000..98bcb90 --- /dev/null +++ b/src/main_tcomb.cpp @@ -0,0 +1,272 @@ +#include +#include +#include +#include +#include +#include +#include +#include +#include + +#include "tree_reader.h" +#include "tree.h" +#include "tree_utils.h" +#include "utils.h" +#include "log.h" +#include "citations.h" + + +/* +Give two options: +1. pass in 2 trees +2. pass in 1 distribution of trees +*/ + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Combine a set of trees from one file into a tree from another." << std::endl; + std::cout << "Pass in 2 trees with `t` and `a`." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxtcomb [OPTIONS]... FILE" << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE reference treefile, STDIN otherwise" << std::endl; + std::cout << " -a, --addtree=FILE alternate treefile" << std::endl; + std::cout << " -o, --outf=FILE output file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxtcomb 1.3\n"; + vl += "Copyright (C) 2017-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim)"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"addtree", required_argument, nullptr, 'a'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool tfileset = false; + bool addfileset = false; + + char * treef = nullptr; + char * addtreef = nullptr; + char * outf = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:a:o:x:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + tfileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'a': + addfileset = true; + addtreef = strdup(optarg); + check_file_exists(addtreef); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (tfileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + if (addfileset && outfileset) { + check_inout_streams_identical(addtreef, outf); + } + + std::istream * pios = nullptr; + std::istream * apios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ifstream * afstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + if (addfileset) { + afstr = new std::ifstream(addtreef); + apios = afstr; + } else { + std::cerr << "Error: you need to set an addfile (-a). Exiting." << std::endl; + exit(0); + } + + if (tfileset) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + std::cerr << "Error: you need to set an tfile (-t). Exiting." << std::endl; + exit(1); + } + } + + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + + bool going = true; + Tree * bigtree = nullptr; + while (going) { + if (retstring.size() > 1) { + bigtree = read_next_tree_from_stream_newick (*pios, retstring, &going); + } else { + going = false; + } + } + std::set btns = bigtree->getRoot()->get_leave_names_set(); + + ft = test_tree_filetype_stream(*apios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + + going = true; + while (going) { + if (retstring.size() > 1) { + Tree * addtree = read_next_tree_from_stream_newick (*apios, retstring, &going); + std::set atns = addtree->getRoot()->get_leave_names_set(); + std::vector v(btns.size()); + auto it = set_difference(btns.begin(), btns.end(), atns.begin(), + atns.end(), v.begin()); + v.resize(static_cast(it-v.begin())); + std::map diffnds; + std::vector diffnms; + for (unsigned int i = 0; i < bigtree->getExtantNodeCount(); i++) { + if (std::count(v.begin(), v.end(), bigtree->getExternalNode(i)->getName()) == 1) { + diffnms.push_back(bigtree->getExternalNode(i)->getName()); + } + } + // get start node on big tree by getting the mrca + Node * connecthere = bigtree->getMRCA(diffnms); + std::vector childs = connecthere->getChildren(); + for (auto & child : childs) { + std::vector v_int(diffnms.size()); + std::set lvsset = child->get_leave_names_set(); + auto it1 = set_intersection(lvsset.begin(), lvsset.end(), + atns.begin(), atns.end(), v_int.begin()); + v_int.resize(static_cast(it1-v_int.begin())); + if (!v_int.empty()) { + // need to add those missing not the overlapping + std::vector v2(lvsset.size()); + auto it2 = set_difference(lvsset.begin(), lvsset.end(), + atns.begin(), atns.end(), v2.begin()); + v2.resize(static_cast(it2-v2.begin())); + for (const auto & v2j : v2) { + std::cout << "to add " << v2j << std::endl; + diffnds[v2j] = bigtree->getExternalNode(v2j); + } + connecthere->removeChild(*child); + } + } + Node * oldroot = addtree->getRoot(); + oldroot->setParent(*connecthere); + connecthere->addChild(*oldroot); + addtree->setRoot(connecthere); + bool didit = false; + while (!diffnds.empty()) { + std::cout << "diffnds.size() = " << diffnds.size() << std::endl; + for (auto iter = diffnds.begin(); iter != diffnds.end(); ++it) { + std::cout << iter->first << std::endl; + Node * cn = iter->second; + while (true) { + Node * prn = cn->getParent(); + std::set cs = cn->get_leave_names_set(); + std::vector v_int; + set_intersection(cs.begin(), cs.end(), atns.begin(), atns.end(), back_inserter(v_int)); + if (!v_int.empty()) { + std::cout << "this is what we need to add " << prn->getNewick(false) << std::endl; + // get nodes + // get mrca + Node * nd = addtree->getMRCA(v_int); + std::cout << "would add to " << nd->getNewick(false) << std::endl; + // START HERE + std::cout << "v_int.size() = " << v_int.size() << std::endl; + if (v_int.size() == 1) { + + // missing something? + + } + std::vector lvsnms = prn->get_leave_names(); + for (const auto & lvsnm : lvsnms) { + if (diffnds.count(lvsnm) > 0) { + diffnds.erase(lvsnm); + } + } + going = false; + didit = true; + break; + } + cn = prn; + } + if (didit) { + break; + } + } + } + (*poos) << getNewickString(addtree) << std::endl; + delete addtree; + } else { + going = false; + } + } + + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_tgen.cpp b/src/main_tgen.cpp new file mode 100644 index 0000000..7e90364 --- /dev/null +++ b/src/main_tgen.cpp @@ -0,0 +1,167 @@ +#include +#include +#include +#include +#include +#include + +#include "tgen.h" +#include "utils.h" +#include "tree_utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Generate all tree topologies for n (<= 10) taxa." << std::endl; + std::cout << "Random tree samples are a-coming." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxtgen [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -n, --ntax=INT number of taxa" << std::endl; + std::cout << " -r, --rooted whether generated trees are rooted (default: false)" << std::endl; + std::cout << " -c, --count give the number of possible trees for n taxa and exit" << std::endl; + std::cout << " -l, --label=STRING prefix label for taxon names (default: 't')" << std::endl; + std::cout << " -o, --outf=FILE output file, STOUT otherwise" << std::endl; +// std::cout << " -x, --seed=INT random number seed, clock otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxtgen 1.3\n"; + vl += "Copyright (C) 2021-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"ntax", required_argument, nullptr, 'n'}, + {"rooted", no_argument, nullptr, 'r'}, + {"count", no_argument, nullptr, 'r'}, + {"label", required_argument, nullptr, 'l'}, + {"outf", required_argument, nullptr, 'o'}, +// {"seed", required_argument, nullptr, 'x'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + int nt = 0; + unsigned int num_taxa = 0; + bool rooted = false; + bool count = false; + bool outfileset = false; + std::string lprefix = "t"; + char * outf = nullptr; + + // limit on number of terminals supported (exhaustive) + unsigned int sim_limit_exh = 10; + // bc of the way trees are simulated, cannot be arbitrarily large + // hope to fix this soon + +// int seed = -1; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "n:rcl:o:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 'n': + nt = string_to_int(optarg, "-n"); + if (nt < 0) { + std::cerr << "Error: ntax must be a positive integer. Exiting." << std::endl; + exit(0); + } else { + num_taxa = static_cast(nt); + } + break; + case 'r': + rooted = true; + break; + case 'c': + count = true; + break; + case 'l': + lprefix = strdup(optarg); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; +// case 'x': +// seed = string_to_int(optarg, "-x"); +// break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + std::string rootstat = (rooted) ? "rooted" : "unrooted"; + + if (num_taxa == 0) { + std::cerr << "Error: you have to set the number of taxa -n. Exiting." << std::endl; + exit(0); + } else if (num_taxa < 3) { + std::cerr << "Error: the number of taxa -n must be >= 3. Exiting." << std::endl; + exit(0); + } else if (num_taxa > sim_limit_exh) { + std::cerr << "Error: the number of taxa -n is currently limited to " << sim_limit_exh + << " (" << get_num_possible_trees(sim_limit_exh, rooted) << " " + << rootstat << " topologies). Exiting." << std::endl; + exit(0); + } + + if (count) { + std::cout << "There are " << get_num_possible_trees(num_taxa, rooted) + << " possible " << rootstat << " topologies for " << num_taxa + << " taxa." << std::endl; + exit(0); + } + + std::ostream * poos = nullptr; + std::ofstream * ofstr = nullptr; + + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + TopologyGenerator TG(num_taxa, rooted, lprefix); + TG.get_newicks(poos); + + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_tlate.cpp b/src/main_tlate.cpp new file mode 100644 index 0000000..7d569b7 --- /dev/null +++ b/src/main_tlate.cpp @@ -0,0 +1,236 @@ +#include +#include +#include +#include +#include + +#include "tlate.h" +#include "utils.h" +#include "sequence.h" +#include "seq_reader.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Translate DNA alignment to amino acids." << std::endl; + std::cout << "This will take fasta, fastq, phylip, and nexus formats from a file or STDIN." << std::endl; + std::cout << "NOTE: assumes sequences are in frame." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxtlate [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -s, --seqf=FILE input nucleotide sequence file, STDIN otherwise" << std::endl; + std::cout << " -t, --table=STRING which translation table to use. currently available:" << std::endl; + std::cout << " 'std' (standard, default)" << std::endl; + std::cout << " 'vmt' (vertebrate mtDNA)" << std::endl; + std::cout << " 'ivmt' (invertebrate mtDNA)" << std::endl; + std::cout << " 'ymt' (yeast mtDNA)" << std::endl; + std::cout << " -o, --outf=FILE output aa sequence file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxtlate 1.3\n"; + vl += "Copyright (C) 2015-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph F. Walker, Joseph W. Brown, Stephen A. Smith (blackrim)"; + return vl; +} + + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"table", required_argument, nullptr, 't'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool outfileset = false; + char * seqf = nullptr; + char * outf = nullptr; + std::string tab = "std"; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:t:o:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 't': + fileset = true; + tab = strdup(optarg); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + std::ostream * poos = nullptr; + std::ofstream * ofstr = nullptr; + std::ifstream * fstr = nullptr; + std::istream * pios = nullptr; + + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + TLATE tl (tab); + + Sequence seq; + std::string retstring; + std::string aa_seq; + std::string nuc_seq; + + int ft = test_seq_filetype_stream(*pios, retstring); + int num_taxa, num_char; // not used, but required by some readers + std::string alphaName; // will check first sequence type + bool first = true; + + // extra stuff to deal with possible interleaved nexus + if (ft == 0) { + bool interleave = false; + get_nexus_dimensions(*pios, num_taxa, num_char, interleave); + retstring = ""; // need to do this to let seqreader know we are mid-file + if (!interleave) { + while (read_next_seq_from_stream(*pios, ft, retstring, seq)) { + if (first) { + alphaName = seq.get_alpha_name(); + if (alphaName != "DNA") { + std::cerr << "Error: incorrect alignment type provided. DNA was expected, but " + << alphaName << " detected. Exiting." << std::endl; + exit(0); + } + first = false; + } + nuc_seq = seq.get_sequence(); + aa_seq = tl.translate(nuc_seq); + (*poos) << ">" << seq.get_id() << std::endl << aa_seq << std::endl; + } + } else { + std::vector seqs = read_interleaved_nexus(*pios, num_taxa, num_char); + for (const auto & sq : seqs) { + seq = sq; + if (first) { + alphaName = seq.get_alpha_name(); + if (alphaName != "DNA") { + std::cerr << "Error: incorrect alignment type provided. DNA was expected, but " + << alphaName << " detected. Exiting." << std::endl; + exit(0); + } + first = false; + } + nuc_seq = seq.get_sequence(); + aa_seq = tl.translate(nuc_seq); + (*poos) << ">" << seq.get_id() << std::endl << aa_seq << std::endl; + } + } + } else { + bool complicated_phylip = false; + // check if we are dealing with a complicated phylip format + if (ft == 1) { + get_phylip_dimensions(retstring, num_taxa, num_char); + complicated_phylip = is_complicated_phylip(*pios, num_char); + } + if (complicated_phylip) { + std::vector seqs = read_phylip(*pios, num_taxa, num_char); + for (const auto & sq : seqs) { + seq = sq; + if (first) { + alphaName = seq.get_alpha_name(); + if (alphaName != "DNA") { + std::cerr << "Error: incorrect alignment type provided. DNA was expected, but " + << alphaName << " detected. Exiting." << std::endl; + exit(0); + } + first = false; + } + nuc_seq = seq.get_sequence(); + aa_seq = tl.translate(nuc_seq); + (*poos) << ">" << seq.get_id() << std::endl << aa_seq << std::endl; + } + } else { + // fasta, fastq, or simple phylip + while (read_next_seq_from_stream(*pios, ft, retstring, seq)) { + if (first) { + alphaName = seq.get_alpha_name(); + if (alphaName != "DNA") { + std::cerr << "Error: incorrect alignment type provided. DNA was expected, but " + << alphaName << " detected. Exiting." << std::endl; + exit(0); + } + first = false; + } + nuc_seq = seq.get_sequence(); + aa_seq = tl.translate(nuc_seq); + (*poos) << ">" << seq.get_id() << std::endl << aa_seq << std::endl; + } + // fasta has a trailing one + if (ft == 2) { + nuc_seq = seq.get_sequence(); + aa_seq = tl.translate(nuc_seq); + (*poos) << ">" << seq.get_id() << std::endl << aa_seq << std::endl; + } + } + } + + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_trt.cpp b/src/main_trt.cpp new file mode 100644 index 0000000..76d876a --- /dev/null +++ b/src/main_trt.cpp @@ -0,0 +1,253 @@ +#include +#include +#include +#include +#include +#include +#include +#include + +#include "tree.h" +#include "tree_reader.h" +#include "utils.h" +#include "tree_utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "This will trace a big tree given a taxon list and and produce newick." << std::endl; + std::cout << "Data can be read from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxtrt [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input tree file, STDIN otherwise" << std::endl; + std::cout << " -n, --names=CSL names sep by commas (NO SPACES!)" << std::endl; + std::cout << " -f, --namesf=FILE names in a file (each on a line)" << std::endl; + std::cout << " -c, --comp take the complement (i.e. remove any taxa not in list)" << std::endl; + std::cout << " -s, --silent suppress warnings of missing tips" << std::endl; + std::cout << " -o, --outf=FILE output tree file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxtrt 1.3\n"; + vl += "Copyright (C) 2017-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Stephen A. Smith (blackrim), Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"names", required_argument, nullptr, 'n'}, + {"comp", no_argument, nullptr, 'c'}, + {"outf", required_argument, nullptr, 'o'}, + {"silent", required_argument, nullptr, 's'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool namesset = false; + bool namefileset = false; + bool complement = false; + bool outfileset = false; + bool silent = false; + std::vector names; + + char * treef = nullptr; + char * outf = nullptr; + char * namesc = nullptr; + char * namesfc = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:n:cf:o:shVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + fileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'n': + namesset = true; + namesc = strdup(optarg); + break; + case 'f': + namefileset = true; + namesfc = strdup(optarg); + check_file_exists(namesfc); + break; + case 'c': + complement = true; + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 's': + silent = true; + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + if (namesset) { + std::vector tokens2; + std::string del2(","); + tokens2.clear(); + tokenize(namesc, tokens2, del2); + for (auto & tk : tokens2) { + trim_spaces(tk); // this will never have to be used, as spaces would break cmd line call + names.push_back(tk); + } + } else if (namefileset) { + std::ifstream nfstr(namesfc); + std::string tline; + while (getline_safe(nfstr, tline)) { + trim_spaces(tline); + if (!tline.empty()) { + names.push_back(tline); + } + } + nfstr.close(); + } else { + std::cerr << "Error: you need to set the names of the tips you want to remove (-n). Exiting." << std::endl; + exit(0); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (fileset) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + //read trees + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting" << std::endl; + exit(0); + } + bool going = true; + if (!complement) { + if (ft == 0) { + // nexus + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + while (going) { + Tree * tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (going) { + tree = get_induced_tree(tree, names, silent); + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } else if (ft == 1) { + // newick + while (going) { + Tree * tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (going) { + tree = get_induced_tree(tree, names, silent); + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } + } else { + // don't assume all trees have the same leaf set + std::vector toKeep; + if (ft == 0) { + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + while (going) { + Tree * tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (going) { + toKeep = get_complement_tip_set(tree, names); + if (toKeep.size() > 1) { + tree = get_induced_tree(tree, toKeep, silent); + (*poos) << getNewickString(tree) << std::endl; + } + delete tree; + } + } + } else if (ft == 1) { + while (going) { + Tree * tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (going) { + toKeep = get_complement_tip_set(tree, names); + if (toKeep.size() > 1) { + tree = get_induced_tree(tree, toKeep, silent); + (*poos) << getNewickString(tree) << std::endl; + } + delete tree; + } + } + } + } + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_tscale.cpp b/src/main_tscale.cpp new file mode 100644 index 0000000..5d683be --- /dev/null +++ b/src/main_tscale.cpp @@ -0,0 +1,210 @@ +#include +#include +#include +#include +#include +#include + +#include "utils.h" +#include "tree_reader.h" +#include "tscale.h" +#include "tree_utils.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Tree rescaling by providing either scaling factor or root height." << std::endl; + std::cout << "This will take a newick- or nexus-formatted tree from a file or STDIN." << std::endl; + std::cout << "Output is written in newick format." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxtscale [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -t, --treef=FILE input tree file, STDIN otherwise" << std::endl; + std::cout << " -s, --scale=DOUBLE edge length scaling factor" << std::endl; + std::cout << " -r, --rootheight=DOUBLE height of root (tree must be ultrametric)" << std::endl; + std::cout << " -o, --outf=FILE output file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxtscale 1.3\n"; + vl += "Copyright (C) 2016-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"treef", required_argument, nullptr, 't'}, + {"scale", required_argument, nullptr, 's'}, + {"rootheight", required_argument, nullptr, 'r'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool tfileset = false; + double rootheight = 0.0; + double scalef = 1.0; + bool heightset = false; + bool scaleset = false; + char * outf = nullptr; + char * treef = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "t:s:r:o:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + tfileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 's': + scalef = string_to_double(optarg, "-s"); + scaleset = true; + break; + case 'r': + rootheight = string_to_double(optarg, "-r"); + heightset = true; + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (tfileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (heightset && scaleset) { + std::cerr << "Error: supply only rootheight (-r) or scale (-s), not both. Exiting." + << std::endl; + exit(0); + } + if (!heightset && !scaleset) { + std::cerr << "Error: you have to set -r or -s. Exiting." + << std::endl; + exit(0); + } + + if (tfileset) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + TScale ts; + + if (heightset) { + ts.set_rootheight(rootheight); + } else { + ts.set_scalef(scalef); + } + + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + std::cerr << "Error: this really only works with nexus or newick. Exiting." << std::endl; + exit(0); + } + bool going = true; + if (ft == 1) { + while (going) { + Tree * tree = read_next_tree_from_stream_newick(*pios, retstring, &going); + if (going) { + if (heightset) { + // have to check ultrametricity + bool isultra = is_ultrametric_paths(tree); + if (!isultra) { + std::cerr << "Error: setting root height only works for ultrametric trees. Exiting." + << std::endl; + exit(0); + } + } + ts.rescale(tree); + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } else if (ft == 0) { // Nexus. need to worry about possible translation tables + std::map translation_table; + bool ttexists; + ttexists = get_nexus_translation_table(*pios, &translation_table, &retstring); + while (going) { + Tree * tree = read_next_tree_from_stream_nexus(*pios, retstring, ttexists, + &translation_table, &going); + if (tree != nullptr) { + if (heightset) { + // have to check ultrametricity + bool isultra = is_ultrametric_paths(tree); + if (!isultra) { + std::cerr << "Error: setting root height only works for ultrametric trees. Exiting." + << std::endl; + exit(0); + } + } + ts.rescale(tree); + (*poos) << getNewickString(tree) << std::endl; + delete tree; + } + } + } + + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/main_upgma.cpp b/src/main_upgma.cpp new file mode 100644 index 0000000..20b57d3 --- /dev/null +++ b/src/main_upgma.cpp @@ -0,0 +1,133 @@ +#include +#include +#include +#include +#include + +#include "upgma.h" +#include "utils.h" +#include "sequence.h" +#include "seq_reader.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Bare bones UPGMA tree generator" << std::endl; + std::cout << "Currently only uses uncorrected p-distances." << std::endl; + std::cout << "This will take fasta, fastq, phylip, and nexus formats from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxupgma [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -s, --seqf=FILE input sequence file, STDIN otherwise" << std::endl; + std::cout << " -o, --outf=FILE output newick file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxupgma 1.3\n"; + vl += "Copyright (C) 2015-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown, Joseph F. Walker"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"outf", required_argument, nullptr, 'o'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool outfileset = false; + char * seqf = nullptr; + char * outf = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:o:hVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + std::ostream * poos = nullptr; + std::ofstream * ofstr = nullptr; + std::ifstream * fstr = nullptr; + std::istream * pios = nullptr; + + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + UPGMA upgma(pios); + (*poos) << upgma.get_newick() << std::endl; + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + + return EXIT_SUCCESS; +} diff --git a/src/main_vcf2fa.cpp b/src/main_vcf2fa.cpp new file mode 100644 index 0000000..82c0f2e --- /dev/null +++ b/src/main_vcf2fa.cpp @@ -0,0 +1,139 @@ +// see specifications here: https://samtools.github.io/hts-specs/VCFv4.2.pdf + +#include +#include +#include +#include +#include + +#include "utils.h" +#include "vcf_reader.h" +#include "log.h" +#include "citations.h" + + +void print_help (); +std::string get_version_line (); + +void print_help () { + std::cout << "Convert vcf file to fasta." << std::endl; + std::cout << "Currently only handles haploid data; phased data will come soon." << std::endl; + std::cout << "Data can be read from a file or STDIN." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxvcf2fa [OPTIONS]..." << std::endl; + std::cout << std::endl; + std::cout << "Options:" << std::endl; + std::cout << " -s, --seqf=FILE input vcf file, STDIN otherwise" << std::endl; + std::cout << " -u, --uppercase export characters in uppercase" << std::endl; + std::cout << " -o, --outf=FILE output fasta sequence file, STOUT otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << " -C, --citation display phyx citation and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string get_version_line () { + std::string vl = "pxvcf2fa 1.3\n"; + vl += "Copyright (C) 2013-2021 FePhyFoFum\n"; + vl += "License GPLv3\n"; + vl += "Written by Joseph W. Brown"; + return vl; +} + +static struct option const long_options[] = +{ + {"seqf", required_argument, nullptr, 's'}, + {"outf", required_argument, nullptr, 'o'}, + {"uppercase", no_argument, nullptr, 'u'}, + {"help", no_argument, nullptr, 'h'}, + {"version", no_argument, nullptr, 'V'}, + {"citation", no_argument, nullptr, 'C'}, + {nullptr, 0, nullptr, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool outfileset = false; + bool toupcase = false; + char * seqf = nullptr; + char * outf = nullptr; + + while (true) { + int oi = -1; + int c = getopt_long(argc, argv, "s:o:uhVC", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'u': + toupcase = true; + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << get_version_line() << std::endl; + exit(0); + case 'C': + std::cout << get_phyx_citation() << std::endl; + exit(0); + default: + print_error(*argv); + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + std::istream * pios = nullptr; + std::ostream * poos = nullptr; + std::ifstream * fstr = nullptr; + std::ofstream * ofstr = nullptr; + + if (fileset) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (!check_for_input_to_stream()) { + print_help(); + exit(1); + } + } + if (outfileset) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + + VcfReader vcf(pios); + vcf.write_seqs(toupcase, poos); + + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} + diff --git a/src/man/citation.h2m b/src/man/citation.h2m new file mode 100644 index 0000000..8541be1 --- /dev/null +++ b/src/man/citation.h2m @@ -0,0 +1,3 @@ +[citation] +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. + diff --git a/src/man/pxaa2cdn.1.in b/src/man/pxaa2cdn.1.in new file mode 100644 index 0000000..375a7a0 --- /dev/null +++ b/src/man/pxaa2cdn.1.in @@ -0,0 +1,43 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXAA2CDN "1" "July 2021" "pxaa2cdn 1.3" "User Commands" +.SH NAME +pxaa2cdn \- manual page for pxaa2cdn 1.3 +.SH SYNOPSIS +.B pxaa2cdn +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Generate a codon alignment from aligned amino acids and unaligned nucleotides. +Taxa found in only 1 input file will be removed. +This will take fasta, fastq, phylip, and nexus inputs. +.SH OPTIONS +.TP +\fB\-a\fR, \fB\-\-aaseqf\fR=\fI\,FILE\/\fR +input sequence file, STDIN otherwise +.TP +\fB\-n\fR, \fB\-\-nucseqf\fR=\fI\,FILE\/\fR +input sequence file, STDIN otherwise +.TP +\fB\-r\fR, \fB\-\-rmlastcdn\fR +remove last codon (default: false) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output fasta file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph F. Walker, Joseph W. Brown, Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2015\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxbdfit.1.in b/src/man/pxbdfit.1.in new file mode 100644 index 0000000..27ad8a4 --- /dev/null +++ b/src/man/pxbdfit.1.in @@ -0,0 +1,39 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXBDFIT "1" "July 2021" "pxbdfit 1.3" "User Commands" +.SH NAME +pxbdfit \- manual page for pxbdfit 1.3 +.SH SYNOPSIS +.B pxbdfit +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Fit a lineage diversification model to a tree. +This will take a newick\- or nexus\-formatted tree from a file or STDIN. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input treefile, STDIN otherwise +.TP +\fB\-m\fR, \fB\-\-model\fR=\fI\,STRING\/\fR +diversification model. either 'yule', 'bd' (default), or 'best' +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2016\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxbdsim.1.in b/src/man/pxbdsim.1.in new file mode 100644 index 0000000..de3a924 --- /dev/null +++ b/src/man/pxbdsim.1.in @@ -0,0 +1,56 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXBDSIM "1" "July 2021" "pxbdsim 1.3" "User Commands" +.SH NAME +pxbdsim \- manual page for pxbdsim 1.3 +.SH SYNOPSIS +.B pxbdsim +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Birth\-death tree simulator. +.SH OPTIONS +.TP +\fB\-e\fR, \fB\-\-extant\fR=\fI\,INT\/\fR +number of extant species, alt to time +.TP +\fB\-t\fR, \fB\-\-time\fR=\fI\,DOUBLE\/\fR +timespan of simulation (age of root), alt to extant +.TP +\fB\-b\fR, \fB\-\-birth\fR=\fI\,DOUBLE\/\fR +birth rate, default=1 +.TP +\fB\-d\fR, \fB\-\-death\fR=\fI\,DOUBLE\/\fR +death rate, default=0 +.TP +\fB\-n\fR, \fB\-\-nreps\fR=\fI\,INT\/\fR +number of replicates, default=1 +.TP +\fB\-s\fR, \fB\-\-showextinct\fR +show lineages that went extinct, default=false +.TP +\fB\-x\fR, \fB\-\-seed\fR=\fI\,INT\/\fR +random number seed, clock otherwise +.TP +\fB\-v\fR, \fB\-\-verbose\fR +print per\-tree simulation summary (to cerr) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim), Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2013\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxboot.1.in b/src/man/pxboot.1.in new file mode 100644 index 0000000..95045c1 --- /dev/null +++ b/src/man/pxboot.1.in @@ -0,0 +1,45 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXBOOT "1" "July 2021" "pxboot 1.3" "User Commands" +.SH NAME +pxboot \- manual page for pxboot 1.3 +.SH SYNOPSIS +.B pxboot +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Sequence alignment bootstrap or jackknife resampling. +This will take fasta, fastq, phylip, and nexus formats from a file or STDIN. +.SH OPTIONS +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, STDIN otherwise +.TP +\fB\-p\fR, \fB\-\-partf\fR=\fI\,FILE\/\fR +file listing empirical partitions: NAME = START\-STOP[\eINTERVAL] +.TP +\fB\-f\fR, \fB\-\-frac\fR=\fI\,DOUBLE\/\fR +jackknife percentage, default bootstrap (i.e. \fB\-f\fR 1.0) +.TP +\fB\-x\fR, \fB\-\-seed\fR=\fI\,INT\/\fR +random number seed, clock otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2013\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxbp.1.in b/src/man/pxbp.1.in new file mode 100644 index 0000000..2555e6d --- /dev/null +++ b/src/man/pxbp.1.in @@ -0,0 +1,58 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXBP "1" "July 2021" "pxbp 1.3" "User Commands" +.SH NAME +pxbp \- manual page for pxbp 1.3 +.SH SYNOPSIS +.B pxbp +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +This will print out bipartitions found in treefile. +Trees are assumed rooted unless the \fB\-e\fR argument is provided. +This will take a newick\- or nexus\-formatted tree from a file or STDIN. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input treefile, STDIN otherwise +.TP +\fB\-v\fR, \fB\-\-verbose\fR +give more output +.TP +\fB\-e\fR, \fB\-\-edgeall\fR +force edgewise (not node \- so when things are unrooted) and +assume all taxa are present in all trees +.TP +\fB\-u\fR, \fB\-\-uniquetree\fR +output unique trees and *no* other output +.TP +\fB\-m\fR, \fB\-\-maptree\fR=\fI\,FILE\/\fR +put the bipart freq on the edges of this tree. This will +create a *.pxbpmapped.tre file. +.TP +\fB\-c\fR, \fB\-\-cutoff\fR +skip biparts that have support lower than this. +.TP +\fB\-s\fR, \fB\-\-suppress\fR +don't print all the output (maybe you use this +with the maptree feature +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2017\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxcat.1.in b/src/man/pxcat.1.in new file mode 100644 index 0000000..12d3319 --- /dev/null +++ b/src/man/pxcat.1.in @@ -0,0 +1,60 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXCAT "1" "July 2021" "pxcat 1.3" "User Commands" +.SH NAME +pxcat \- manual page for pxcat 1.3 +.SH SYNOPSIS +.B pxcat +[\fI\,OPTIONS\/\fR]... \fI\,FILES\/\fR +.SH DESCRIPTION +Sequence file concatenation. +Can use wildcards e.g.: +.IP +pxcat \fB\-s\fR *.phy \fB\-o\fR my_cat_file.fa +.SS "However, if the argument list is too long (shell limit), put filenames in a file:" +.IP +for x in *.phy +.IP +do echo $x >> flist.txt +.IP +done +.SS "and call using the -f option:" +.IP +pxcat \fB\-f\fR flist.txt \fB\-o\fR my_cat_file.fa +.PP +This will take fasta, fastq, phylip, and nexus sequence formats. +Individual files may be of different formats. +.SH OPTIONS +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +list of input sequence files (space delimited) +.TP +\fB\-f\fR, \fB\-\-flistFILE\fR +file listing input files (one per line) +.TP +\fB\-p\fR, \fB\-\-partf\fR=\fI\,FILE\/\fR +output partition file, none otherwise +.TP +\fB\-u\fR, \fB\-\-uppercase\fR +export characters in uppercase +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph F. Walker, Joseph W. Brown, Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2015\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxclsq.1.in b/src/man/pxclsq.1.in new file mode 100644 index 0000000..8526f75 --- /dev/null +++ b/src/man/pxclsq.1.in @@ -0,0 +1,55 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXCLSQ "1" "July 2021" "pxclsq 1.3" "User Commands" +.SH NAME +pxclsq \- manual page for pxclsq 1.3 +.SH SYNOPSIS +.B pxclsq +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Clean alignments by removing positions/taxa with too much ambiguous data. +This will take fasta, fastq, phylip, and nexus formats from a file or STDIN. +Results are written in fasta format. +.SH OPTIONS +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, STDIN otherwise +.TP +\fB\-p\fR, \fB\-\-prop\fR=\fI\,DOUBLE\/\fR +proportion required to be present, default=0.5 +.TP +\fB\-t\fR, \fB\-\-taxa\fR +consider missing data per taxon (default: per site) +.TP +\fB\-c\fR, \fB\-\-codon\fR +examine sequences by codon rather than site +\- requires all sequences be in frame and of correct length +.TP +\fB\-i\fR, \fB\-\-info\fR +report counts of missing data and exit +\- combine with \fB\-t\fR to get report by taxon (rather than site) +\- combine with \fB\-c\fR to use codons as units +.TP +\fB\-v\fR, \fB\-\-verbose\fR +more verbose output (i.e. if entire seqs are removed) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output fasta file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph F. Walker, Joseph W. Brown, Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2015\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxcltr.1.in b/src/man/pxcltr.1.in new file mode 100644 index 0000000..15ccda0 --- /dev/null +++ b/src/man/pxcltr.1.in @@ -0,0 +1,49 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXCLTR "1" "July 2021" "pxcltr 1.3" "User Commands" +.SH NAME +pxcltr \- manual page for pxcltr 1.3 +.SH SYNOPSIS +.B pxcltr +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +General tree cleaner. +Removes annotations (node labels), 'knuckles' (2\-degree nodes), and +root edges to generate a 'vanilla' newick representation. +By default removes all properties. Alternatively choose 1 property. +This will take a newick\- or nexus\-formatted tree from a file or STDIN. +Output is written in newick format. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input treefile, STDIN otherwise +.TP +\fB\-r\fR, \fB\-\-root\fR +remove root edge (if present) +.TP +\fB\-l\fR, \fB\-\-labels\fR +remove internal node labels +.TP +\fB\-k\fR, \fB\-\-knuckles\fR +remove 2\-degree internal nodes +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2017\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxcolt.1.in b/src/man/pxcolt.1.in new file mode 100644 index 0000000..10f3e9b --- /dev/null +++ b/src/man/pxcolt.1.in @@ -0,0 +1,41 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXCOLT "1" "July 2021" "pxcolt 1.3" "User Commands" +.SH NAME +pxcolt \- manual page for pxcolt 1.3 +.SH SYNOPSIS +.B pxcolt +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Collapse edges with support below some threshold. +If annotated Nexus, may require passing in the support identifier (\fB\-s\fR). +This will take a newick\- or nexus\-formatted tree from a file or STDIN. +Output is written in newick format. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, STDIN otherwise +.TP +\fB\-l\fR, \fB\-\-limit\fR=\fI\,DOUBLE\/\fR +minimum support threshold as proportion (default = 0.5) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2018\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxcomp.1.in b/src/man/pxcomp.1.in new file mode 100644 index 0000000..852308e --- /dev/null +++ b/src/man/pxcomp.1.in @@ -0,0 +1,37 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXCOMP "1" "July 2021" "pxcomp 1.3" "User Commands" +.SH NAME +pxcomp \- manual page for pxcomp 1.3 +.SH SYNOPSIS +.B pxcomp +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Sequence compositional homogeneity test. +Chi\-square test for equivalent character state counts across lineages. +This will take fasta, phylip, and nexus formats from a file or STDIN. +.SH OPTIONS +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input seq file, STDIN otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output stats file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2016\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxconsq.1.in b/src/man/pxconsq.1.in new file mode 100644 index 0000000..23a9c0c --- /dev/null +++ b/src/man/pxconsq.1.in @@ -0,0 +1,37 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXCONSQ "1" "July 2021" "pxconsq 1.3" "User Commands" +.SH NAME +pxconsq \- manual page for pxconsq 1.3 +.SH SYNOPSIS +.B pxconsq +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Compute a consensus sequence from an alignment. +This will take fasta, phylip, and nexus formats from a file or STDIN. +Results are written in fasta format. +.SH OPTIONS +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, STDIN otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim), Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2013\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxcontrates.1.in b/src/man/pxcontrates.1.in new file mode 100644 index 0000000..9b49dbf --- /dev/null +++ b/src/man/pxcontrates.1.in @@ -0,0 +1,42 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXCONTRATES "1" "July 2021" "pxcontrates 1.3" "User Commands" +.SH NAME +pxcontrates \- manual page for pxcontrates 1.3 +.SH SYNOPSIS +.B pxcontrates +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Continuous character rate estimation with Brownian and OU. +This will take fasta, phylip, and nexus formats from a file or STDIN. +.SH OPTIONS +.TP +\fB\-c\fR, \fB\-\-charf\fR=\fI\,FILE\/\fR +input character file, STDIN otherwise +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, STDIN otherwise +.TP +\fB\-a\fR, \fB\-\-analysis\fR=\fI\,NUM\/\fR +analysis type (0=anc[DEFAULT], 1=ratetest) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2013\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxfqfilt.1.in b/src/man/pxfqfilt.1.in new file mode 100644 index 0000000..251b3b1 --- /dev/null +++ b/src/man/pxfqfilt.1.in @@ -0,0 +1,39 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXFQFILT "1" "July 2021" "pxfqfilt 1.3" "User Commands" +.SH NAME +pxfqfilt \- manual page for pxfqfilt 1.3 +.SH SYNOPSIS +.B pxfqfilt +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Filter fastq files by mean quality. +Data can be read from a file or STDIN. +.SH OPTIONS +.TP +\fB\-m\fR, \fB\-\-mean\fR=\fI\,VALUE\/\fR +mean value under which seqs are filtered +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, STDIN otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2013\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxlog.1.in b/src/man/pxlog.1.in new file mode 100644 index 0000000..f9a4330 --- /dev/null +++ b/src/man/pxlog.1.in @@ -0,0 +1,67 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXLOG "1" "July 2021" "pxlog 1.3" "User Commands" +.SH NAME +pxlog \- manual page for pxlog 1.3 +.SH SYNOPSIS +.B pxlog +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +MCMC log file manipulator. +Can combine and resample parameters or trees across files. +Log files need not contain the same number of samples. +Input files may be indicated using wildcards e.g. '*.trees' +Parameter log files are expected to be whitespace delimited. +*NOTE* All values are in terms of number of SAMPLES (NOT generations). +.SH OPTIONS +.TP +\fB\-p\fR, \fB\-\-parmf\fR=\fI\,FILE\/\fR +input parameter log file(s) +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree log file(s) +.TP +\fB\-b\fR, \fB\-\-burnin\fR=\fI\,INT\/\fR +number of samples to exclude at the beginning of a file +.TP +\fB\-n\fR, \fB\-\-thin\fR=\fI\,INT\/\fR +interval of resampling +.TP +\fB\-i\fR, \fB\-\-info\fR +calculate log file attributes and exit +.TP +\fB\-s\fR, \fB\-\-summarize\fR +summary statistics of samples (parameter logs only) +.TP +\fB\-c\fR, \fB\-\-columns\fR +print out column names (parameter logs only) +.TP +\fB\-d\fR, \fB\-\-delete\fR=\fI\,CSL\/\fR +delete parm columns by 1\-index sep by commas (NO SPACES!) +.TP +\fB\-k\fR, \fB\-\-keep\fR=\fI\,CSL\/\fR +keep only parm columns by 1\-index sep by commas (NO SPACES!) +.TP +\fB\-v\fR, \fB\-\-verbose\fR +make the output more verbose +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2016\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxlssq.1.in b/src/man/pxlssq.1.in new file mode 100644 index 0000000..cbd4aab --- /dev/null +++ b/src/man/pxlssq.1.in @@ -0,0 +1,62 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXLSSQ "1" "July 2021" "pxlssq 1.3" "User Commands" +.SH NAME +pxlssq \- manual page for pxlssq 1.3 +.SH SYNOPSIS +.B pxlssq +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Print sequence file summary. +By default returns all properties. Alternatively choose 1 property. +This will take fasta, phylip, and nexus formats from a file or STDIN. +.SH OPTIONS +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input seq file, STDIN otherwise +.TP +\fB\-i\fR, \fB\-\-indiv\fR +output stats for individual sequences +.TP +\fB\-n\fR, \fB\-\-nseq\fR +return the number of sequences +.TP +\fB\-c\fR, \fB\-\-nchar\fR +return the number of characters (only if aligned) +\- for unaligned seqs, use with \fB\-i\fR flag +.TP +\fB\-l\fR, \fB\-\-labels\fR +return all taxon labels (one per line) +.TP +\fB\-p\fR, \fB\-\-prot\fR +force interpret as protein (if inference fails) +.TP +\fB\-a\fR, \fB\-\-aligned\fR +return whether sequences are aligned (same length) +.TP +\fB\-f\fR, \fB\-\-freqs\fR +return character state frequencies +.TP +\fB\-m\fR, \fB\-\-missing\fR +return the proportion of missing (\-,?) characters +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output stats file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph F. Walker, Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2016\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxlstr.1.in b/src/man/pxlstr.1.in new file mode 100644 index 0000000..7dd82e1 --- /dev/null +++ b/src/man/pxlstr.1.in @@ -0,0 +1,61 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXLSTR "1" "July 2021" "pxlstr 1.3" "User Commands" +.SH NAME +pxlstr \- manual page for pxlstr 1.3 +.SH SYNOPSIS +.B pxlstr +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Print tree summary. +By default returns all properties. Alternatively choose 1 property. +This will take a newick\- or nexus\-formatted tree from a file or STDIN. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, STDIN otherwise +.TP +\fB\-r\fR, \fB\-\-rooted\fR +return whether the tree is rooted +.TP +\fB\-a\fR, \fB\-\-age\fR +return the height of root (must be rooted and ultrametric) +.TP +\fB\-n\fR, \fB\-\-ntips\fR +return the number of terminals +.TP +\fB\-u\fR, \fB\-\-ultrametric\fR +return whether tree is ultrametric +.TP +\fB\-b\fR, \fB\-\-binary\fR +return whether tree is binary +.TP +\fB\-l\fR, \fB\-\-length\fR +return the length of the tree +.TP +\fB\-i\fR, \fB\-\-tiplabels\fR +return all tip labels (one per line) +.TP +\fB\-v\fR, \fB\-\-rtvar\fR +return root\-to\-tip variance +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output tree stats file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2016\-2021 FePhyFoFum +License: GPLv3 diff --git a/src/man/pxmono.1.in b/src/man/pxmono.1.in new file mode 100644 index 0000000..9fbae5a --- /dev/null +++ b/src/man/pxmono.1.in @@ -0,0 +1,48 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXMONO "1" "July 2021" "pxmono 1.3" "User Commands" +.SH NAME +pxmono \- manual page for pxmono 1.3 +.SH SYNOPSIS +.B pxmono +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Monophyly checker. +This will take a newick\- or nexus\-formatted tree from a file or STDIN. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, STDIN otherwise +.TP +\fB\-n\fR, \fB\-\-names\fR=\fI\,CSL\/\fR +names separated by commas (NO SPACES!) +.TP +\fB\-f\fR, \fB\-\-namesf\fR=\fI\,FILE\/\fR +names in a file (each on a line) +.TP +\fB\-c\fR, \fB\-\-comp\fR +take the complement (i.e. check monophyly of taxa not in list) +.TP +\fB\-i\fR, \fB\-\-ignore\fR +ignore missing (default: exit if names are not in the tree) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output tree file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2019\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxmrca.1.in b/src/man/pxmrca.1.in new file mode 100644 index 0000000..e0ef9d1 --- /dev/null +++ b/src/man/pxmrca.1.in @@ -0,0 +1,41 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXMRCA "1" "July 2021" "pxmrca 1.3" "User Commands" +.SH NAME +pxmrca \- manual page for pxmrca 1.3 +.SH SYNOPSIS +.B pxmrca +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Get the number of descendant tips of internal nodes specified by mrca statements. +This will take a newick\- or nexus\-formatted tree from a file or STDIN, +and an MRCA file with format: +MRCANAME = tip1 tip2 ... +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input newick tree file, STDIN otherwise +.TP +\fB\-m\fR, \fB\-\-mrca\fR=\fI\,FILE\/\fR +file containing MRCA declarations +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output newick file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2013\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxmrcacut.1.in b/src/man/pxmrcacut.1.in new file mode 100644 index 0000000..c3472d5 --- /dev/null +++ b/src/man/pxmrcacut.1.in @@ -0,0 +1,42 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXMRCACUT "1" "July 2021" "pxmrcacut 1.3" "User Commands" +.SH NAME +pxmrcacut \- manual page for pxmrcacut 1.3 +.SH SYNOPSIS +.B pxmrcacut +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Extract subclade(s) from tree(s). +This will take a newick\- or nexus\-formatted tree from a file or STDIN, +and an MRCA file with format: +MRCANAME = tip1 tip2 ... +If multiple MRCAs are provided, multiple subtrees are returned +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input newick tree file, STDIN otherwise +.TP +\fB\-m\fR, \fB\-\-mrca\fR=\fI\,FILE\/\fR +file containing MRCA declarations +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output newick file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim), Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2013\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxmrcaname.1.in b/src/man/pxmrcaname.1.in new file mode 100644 index 0000000..48190e1 --- /dev/null +++ b/src/man/pxmrcaname.1.in @@ -0,0 +1,47 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXMRCANAME "1" "July 2021" "pxmrcaname 1.3" "User Commands" +.SH NAME +pxmrcaname \- manual page for pxmrcaname 1.3 +.SH SYNOPSIS +.B pxmrcaname +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Label internal nodes with clade names. +This will take a newick\- or nexus\-formatted tree from a file or STDIN, +and an MRCA file with format: +.IP +MRCANAME = tip1 tip2 ... +.SS "If no MRCA file is present, internal nodes will be labelled:" +.IP +px1, px2, ..., pxn +.PP +Output is written in newick format. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input newick tree file, STDIN otherwise +.TP +\fB\-m\fR, \fB\-\-mrca\fR=\fI\,FILE\/\fR +file containing MRCA declarations +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output newick file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim), Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2013\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxnj.1.in b/src/man/pxnj.1.in new file mode 100644 index 0000000..2388d28 --- /dev/null +++ b/src/man/pxnj.1.in @@ -0,0 +1,39 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXNJ "1" "June 2021" "pxnj 1.2" "User Commands" +.SH NAME +pxnj \- manual page for pxnj 1.2 +.SH SYNOPSIS +.B pxnj +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Basic neighbour\-joining tree maker. +This will take fasta, fastq, phylip, and nexus inputs from a file or STDIN. +.SH OPTIONS +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, STDIN otherwise +.TP +\fB\-n\fR, \fB\-\-nthreads\fR=\fI\,INT\/\fR +number of threads, default=1 +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output newick file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph F. Walker, Joseph W. Brown, Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2015\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxnni.1.in b/src/man/pxnni.1.in new file mode 100644 index 0000000..723fa45 --- /dev/null +++ b/src/man/pxnni.1.in @@ -0,0 +1,40 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXNNI "1" "April 2021" "pxnni 1.2" "User Commands" +.SH NAME +pxnni \- manual page for pxnni 1.2 +.SH SYNOPSIS +.B pxnni +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Generate a Nearest Neighbor Interchange (NNI) tree. +This will take a newick\- or nexus\-formatted tree from a file or STDIN. +Output is written in newick format. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, STDIN otherwise +.TP +\fB\-x\fR, \fB\-\-seed\fR=\fI\,INT\/\fR +random number seed, clock otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output tree file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim), Joseph F. Walker, and Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2013\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxnw.1.in b/src/man/pxnw.1.in new file mode 100644 index 0000000..6c45c14 --- /dev/null +++ b/src/man/pxnw.1.in @@ -0,0 +1,52 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXNW "1" "July 2021" "pxnw 1.3" "User Commands" +.SH NAME +pxnw \- manual page for pxnw 1.3 +.SH SYNOPSIS +.B pxnw +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Conduct Needleman\-Wunsch analysis for all the seqs in a file. +This will take fasta, fastq, phylip, and nexus formats from a file or STDIN. +Output is a list of the scores and distances (and the alignments if asked). +.SH OPTIONS +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, STDIN otherwise +.TP +\fB\-a\fR, \fB\-\-outalnf\fR=\fI\,FILE\/\fR +output sequence file, won't output otherwise +.TP +\fB\-t\fR, \fB\-\-seqtype\fR=\fI\,INT\/\fR +sequence type, default=DNA (DNA=0,AA=1) +.TP +\fB\-m\fR, \fB\-\-matrix\fR=\fI\,FILE\/\fR +scoring matrix, default DNA=EDNAFULL, AA=BLOSUM62 +.TP +\fB\-n\fR, \fB\-\-nthreads\fR=\fI\,INT\/\fR +number of threads (open mp), default=2 +.TP +\fB\-v\fR, \fB\-\-verbose\fR +make the output more verbose, turns off parallel +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output score/distance file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2013\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxpoly.1.in b/src/man/pxpoly.1.in new file mode 100644 index 0000000..386b23c --- /dev/null +++ b/src/man/pxpoly.1.in @@ -0,0 +1,40 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXPOLY "1" "July 2021" "pxpoly 1.3" "User Commands" +.SH NAME +pxpoly \- manual page for pxpoly 1.3 +.SH SYNOPSIS +.B pxpoly +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Randomly sample polytomies to generate a binary tree. +Currently only works with rooted trees (checked) +Output is written in newick format. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, STDIN otherwise +.TP +\fB\-x\fR, \fB\-\-seed\fR=\fI\,INT\/\fR +random number seed, clock otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2021\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxrecode.1.in b/src/man/pxrecode.1.in new file mode 100644 index 0000000..3f48717 --- /dev/null +++ b/src/man/pxrecode.1.in @@ -0,0 +1,52 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXRECODE "1" "July 2021" "pxrecode 1.3" "User Commands" +.SH NAME +pxrecode \- manual page for pxrecode 1.3 +.SH SYNOPSIS +.B pxrecode +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Nucleotide sequence recoding. +This will take fasta, fastq, phylip, and nexus formats from a file or STDIN. +.SH OPTIONS +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, STDIN otherwise +.TP +\fB\-r\fR, \fB\-\-recode\fR=\fI\,STRING\/\fR +string identifying recoding scheme (default: RY) +.IP +Supported recodings (use any valid combination): +.IP +R = A|G +Y = C|T +S = C|G +W = A|T +M = A|C +K = G|T +B = C|G|T +D = A|G|T +H = A|C|T +V = A|C|G +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2013\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxrevcomp.1.in b/src/man/pxrevcomp.1.in new file mode 100644 index 0000000..90a3bf5 --- /dev/null +++ b/src/man/pxrevcomp.1.in @@ -0,0 +1,50 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXREVCOMP "1" "July 2021" "pxrevcomp 1.3" "User Commands" +.SH NAME +pxrevcomp \- manual page for pxrevcomp 1.3 +.SH SYNOPSIS +.B pxrevcomp +[\fI\,OPTIONS\/\fR]... [\fI\,FILE\/\fR]... +.SH DESCRIPTION +Reverse complement sequences. +This will take fasta, fastq, phylip, and nexus formats from a file or STDIN. +Results are written in fasta format. +.SH OPTIONS +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, STDIN otherwise +.TP +\fB\-i\fR, \fB\-\-ids\fR=\fI\,IDS\/\fR +a comma sep list of ids to flip (NO SPACES!) +.TP +\fB\-g\fR, \fB\-\-guess\fR +EXPERIMENTAL: guess whether there are seqs that need to be +rev comp. uses edlib library on first seq +.TP +\fB\-p\fR, \fB\-\-pguess\fR +EXPERIMENTAL: progressively guess +.TP +\fB\-m\fR, \fB\-\-sguess\fR +EXPERIMENTAL: sampled guess +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2017\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxrls.1.in b/src/man/pxrls.1.in new file mode 100644 index 0000000..6aaf01e --- /dev/null +++ b/src/man/pxrls.1.in @@ -0,0 +1,47 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXRLS "1" "July 2021" "pxrls 1.3" "User Commands" +.SH NAME +pxrls \- manual page for pxrls 1.3 +.SH SYNOPSIS +.B pxrls +[\fI\,OPTIONS\/\fR]... \fI\,FILES\/\fR +.SH DESCRIPTION +Taxon relabelling for alignments. +This will take fasta, phylip, and nexus formats from a file or STDIN. +Two ordered lists of taxa, \fB\-c\fR (current) and \fB\-n\fR (new) must be provided. +Results are written in fasta format. +.SH OPTIONS +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input seq file, STDIN otherwise +.TP +\fB\-c\fR, \fB\-\-cnames\fR=\fI\,FILE\/\fR +file containing current taxon labels (one per line) +.TP +\fB\-n\fR, \fB\-\-nnames\fR=\fI\,FILE\/\fR +file containing new taxon labels (one per line) +.TP +\fB\-v\fR, \fB\-\-verbose\fR +make the output more verbose +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown, Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2016\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxrlt.1.in b/src/man/pxrlt.1.in new file mode 100644 index 0000000..6aee51f --- /dev/null +++ b/src/man/pxrlt.1.in @@ -0,0 +1,47 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXRLT "1" "July 2021" "pxrlt 1.3" "User Commands" +.SH NAME +pxrlt \- manual page for pxrlt 1.3 +.SH SYNOPSIS +.B pxrlt +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Taxon relabelling for trees. +Two ordered lists of taxa, \fB\-c\fR (current) and \fB\-n\fR (new) must be provided. +This will take a newick\- or nexus\-formatted tree from a file or STDIN. +Output is written in newick format. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, STDIN otherwise +.TP +\fB\-c\fR, \fB\-\-cnames\fR=\fI\,FILE\/\fR +file containing current taxon labels (one per line) +.TP +\fB\-n\fR, \fB\-\-nnames\fR=\fI\,FILE\/\fR +file containing new taxon labels (one per line) +.TP +\fB\-v\fR, \fB\-\-verbose\fR +make the output more verbose +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown, Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2018\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxrmk.1.in b/src/man/pxrmk.1.in new file mode 100644 index 0000000..2eb35e4 --- /dev/null +++ b/src/man/pxrmk.1.in @@ -0,0 +1,37 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXRMK "1" "July 2021" "pxrmk 1.3" "User Commands" +.SH NAME +pxrmk \- manual page for pxrmk 1.3 +.SH SYNOPSIS +.B pxrmk +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Remove two\-degree internal nodes ('knuckles') from a tree. +This will take a newick\- or nexus\-formatted tree from a file or STDIN. +Output is written in newick format. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, STDIN otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output tree file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown, Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2016\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxrms.1.in b/src/man/pxrms.1.in new file mode 100644 index 0000000..ae62b7a --- /dev/null +++ b/src/man/pxrms.1.in @@ -0,0 +1,49 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXRMS "1" "July 2021" "pxrms 1.3" "User Commands" +.SH NAME +pxrms \- manual page for pxrms 1.3 +.SH SYNOPSIS +.B pxrms +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Remove sequences by label. +This will take fasta, fastq, phylip, and nexus formats from a file or STDIN. +Results are written in fasta format. +.SH OPTIONS +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input nucleotide sequence file, STDIN otherwise +.TP +\fB\-n\fR, \fB\-\-names\fR=\fI\,CSL\/\fR +names sep by commas (NO SPACES!) +.TP +\fB\-f\fR, \fB\-\-namesf\fR=\fI\,FILE\/\fR +names in a file (each on a line) +.TP +\fB\-r\fR, \fB\-\-regex\fR=\fI\,STRING\/\fR +match tip labels by a regular expression +.TP +\fB\-c\fR, \fB\-\-comp\fR +take the complement (i.e. remove any taxa not in list) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown, Joseph F. Walker, Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2015\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxrmt.1.in b/src/man/pxrmt.1.in new file mode 100644 index 0000000..223a314 --- /dev/null +++ b/src/man/pxrmt.1.in @@ -0,0 +1,52 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXRMT "1" "July 2021" "pxrmt 1.3" "User Commands" +.SH NAME +pxrmt \- manual page for pxrmt 1.3 +.SH SYNOPSIS +.B pxrmt +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Remove tree tips by label. +This will take a newick\- or nexus\-formatted tree from a file or STDIN. +Output is written in newick format. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, STDIN otherwise +.TP +\fB\-n\fR, \fB\-\-names\fR=\fI\,CSL\/\fR +names sep by commas (NO SPACES!) +.TP +\fB\-f\fR, \fB\-\-namesf\fR=\fI\,FILE\/\fR +names in a file (each on a line) +.TP +\fB\-r\fR, \fB\-\-regex\fR=\fI\,STRING\/\fR +match tip labels by a regular expression +.TP +\fB\-c\fR, \fB\-\-comp\fR +take the complement (i.e. remove any taxa not in list) +.TP +\fB\-s\fR, \fB\-\-silent\fR +suppress warnings of missing tips +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output tree file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown, Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2014\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxrr.1.in b/src/man/pxrr.1.in new file mode 100644 index 0000000..1c8102b --- /dev/null +++ b/src/man/pxrr.1.in @@ -0,0 +1,52 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXRR "1" "July 2021" "pxrr 1.3" "User Commands" +.SH NAME +pxrr \- manual page for pxrr 1.3 +.SH SYNOPSIS +.B pxrr +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Reroot (or unroot) a tree file and produce a newick. +This will take a newick\- or nexus\-formatted tree from a file or STDIN. +Output is written in newick format. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, STDIN otherwise +.TP +\fB\-g\fR, \fB\-\-outgroups\fR=\fI\,CSL\/\fR +outgroup sep by commas (NO SPACES!) +.TP +\fB\-f\fR, \fB\-\-namesf\fR=\fI\,FILE\/\fR +outgroups in a file (each on a line) +.TP +\fB\-r\fR, \fB\-\-ranked\fR +turn on ordering of outgroups. will root on first one present +.TP +\fB\-u\fR, \fB\-\-unroot\fR +unroot the tree +.TP +\fB\-s\fR, \fB\-\-silent\fR +do not error if outgroup(s) not found +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output tree file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim), Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2014\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxs2fa.1.in b/src/man/pxs2fa.1.in new file mode 100644 index 0000000..8d8fe55 --- /dev/null +++ b/src/man/pxs2fa.1.in @@ -0,0 +1,39 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXS2FA "1" "July 2021" "pxs2fa 1.3" "User Commands" +.SH NAME +pxs2fa \- manual page for pxs2fa 1.3 +.SH SYNOPSIS +.B pxs2fa +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Convert seqfiles from nexus, phylip, fastq to fasta. +Data can be read from a file or STDIN. +.SH OPTIONS +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, STDIN otherwise +.TP +\fB\-u\fR, \fB\-\-uppercase\fR +export characters in uppercase +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim), Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2013\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxs2nex.1.in b/src/man/pxs2nex.1.in new file mode 100644 index 0000000..e75ef6b --- /dev/null +++ b/src/man/pxs2nex.1.in @@ -0,0 +1,38 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXS2NEX "1" "July 2021" "pxs2nex 1.3" "User Commands" +.SH NAME +pxs2nex \- manual page for pxs2nex 1.3 +.SH SYNOPSIS +.B pxs2nex +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Convert seqfiles from nexus, phylip, or fastq to nexus. +Can read from STDIN or file. +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, STDIN otherwise +.TP +\fB\-u\fR, \fB\-\-uppercase\fR +export characters in uppercase +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim), Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2013\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxs2phy.1.in b/src/man/pxs2phy.1.in new file mode 100644 index 0000000..205bc31 --- /dev/null +++ b/src/man/pxs2phy.1.in @@ -0,0 +1,38 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXS2PHY "1" "July 2021" "pxs2phy 1.3" "User Commands" +.SH NAME +pxs2phy \- manual page for pxs2phy 1.3 +.SH SYNOPSIS +.B pxs2phy +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Convert seqfiles from nexus, phylip, or fastq to phylip. +Can read from STDIN or file. +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, STDIN otherwise +.TP +\fB\-u\fR, \fB\-\-uppercase\fR +export characters in uppercase +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim), Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2013\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxseqgen.1.in b/src/man/pxseqgen.1.in new file mode 100644 index 0000000..d24a68b --- /dev/null +++ b/src/man/pxseqgen.1.in @@ -0,0 +1,83 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXSEQGEN "1" "July 2021" "pxseqgen 1.3" "User Commands" +.SH NAME +pxseqgen \- manual page for pxseqgen 1.3 +.SH SYNOPSIS +.B pxseqgen +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Basic sequence simulator under the GTR model. +This will take fasta, fastq, phylip, and nexus formats from a file or STDIN. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input treefile, STDIN otherwise +.TP +\fB\-l\fR, \fB\-\-length\fR=\fI\,INT\/\fR +length of sequences to generate. default is 1000 +.TP +\fB\-b\fR, \fB\-\-basef\fR=\fI\,Input\/\fR +comma\-delimited base freqs in order: A,C,G,T. default is equal +.TP +\fB\-g\fR, \fB\-\-gamma\fR=\fI\,INT\/\fR +gamma shape value. default is no rate variation +.TP +\fB\-i\fR, \fB\-\-pinvar\fR=\fI\,FLOAT\/\fR +proportion of invariable sites. default is 0.0 +.TP +\fB\-r\fR, \fB\-\-ratemat\fR=\fI\,Input\/\fR +comma\-delimited input values for rate matrix. default is JC69 +order: A<\->C,A<\->G,A<\->T,C<\->G,C<\->T,G<\->T +.TP +\fB\-w\fR, \fB\-\-aaratemat\fR=\fI\,Input\/\fR +comma\-delimited amino acid rate matrix. default is all freqs equal +order is ARNDCQEGHILKMFPSTWYV +.HP +\fB\-q\fR, \fB\-\-aabasefreq\fR=\fI\,Input\/\fR AA frequencies, order: ARNDCQEGHILKMFPSTWYV +.TP +\fB\-c\fR, \fB\-\-protein\fR +run as amino acid +.TP +\fB\-n\fR, \fB\-\-nreps\fR=\fI\,INT\/\fR +number of replicates +.TP +\fB\-x\fR, \fB\-\-seed\fR=\fI\,INT\/\fR +random number seed, clock otherwise +.TP +\fB\-a\fR, \fB\-\-ancestors\fR +print the ancestral node sequences. default is no +use \fB\-p\fR for the nodes labels +.TP +\fB\-p\fR, \fB\-\-printnodelabels\fR +print newick with internal node labels. default is no +.TP +\fB\-m\fR, \fB\-\-multimodel\fR=\fI\,Input\/\fR specify multiple models across tree +input is as follows: +.TP +A<\->C,A<\->G,A<\->T,C<\->G,C<\->T,G<\->T,Node#,A<\->C,A<\->G,A<\->T,C<\->G,C<\->T,G<\->T +EX:.3,.3,.3,.3,.3,1,.3,.3,.2,.5,.4 +.TP +\fB\-k\fR, \fB\-\-rootseq\fR=\fI\,STRING\/\fR +set root sequence. default is random (from basefreqs) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output seq file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph F. Walker, Joseph W. Brown, Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2015\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxssort.1.in b/src/man/pxssort.1.in new file mode 100644 index 0000000..cb09b02 --- /dev/null +++ b/src/man/pxssort.1.in @@ -0,0 +1,40 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXSSORT "1" "July 2021" "pxssort 1.3" "User Commands" +.SH NAME +pxssort \- manual page for pxssort 1.3 +.SH SYNOPSIS +.B pxssort +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Sort sequences by id or length. +This will take fasta, phylip, and nexus formats from a file or STDIN. +.SH OPTIONS +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, STDIN otherwise +.TP +\fB\-b\fR, \fB\-\-sortby\fR +what to sort by: 1:id (default) 2:id rev +3:length (<) 4:length (>) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim), Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2017\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxsstat.1.in b/src/man/pxsstat.1.in new file mode 100644 index 0000000..57e0cbc --- /dev/null +++ b/src/man/pxsstat.1.in @@ -0,0 +1,37 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXSSTAT "1" "July 2021" "pxsstat 1.3" "User Commands" +.SH NAME +pxsstat \- manual page for pxsstat 1.3 +.SH SYNOPSIS +.B pxsstat +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Calculates multinomial alignment test statistics. +Currently only calculates the test statistic from Bollback (2002) MBE. +This will take fasta, fastq, phylip, and nexus formats from a file or STDIN. +.SH OPTIONS +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input seq file, STDIN otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2017\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxstrec.1.in b/src/man/pxstrec.1.in new file mode 100644 index 0000000..14cb25f --- /dev/null +++ b/src/man/pxstrec.1.in @@ -0,0 +1,62 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXSTREC "1" "July 2021" "pxstrec 1.3" "User Commands" +.SH NAME +pxstrec \- manual page for pxstrec 1.3 +.SH SYNOPSIS +.B pxstrec +[\fI\,OPTIONS\/\fR]... \fI\,FILES\/\fR +.SH DESCRIPTION +This will conduct state reconstruction analyses. +.SH OPTIONS +.TP +\fB\-d\fR, \fB\-\-dataf\fR=\fI\,FILE\/\fR +input data file +.TP +\fB\-w\fR, \fB\-\-datawide\fR +data is in wide format so (001 instead of 2) +.TP +\fB\-z\fR, \fB\-\-dataz\fR +data is in probability format (0,1,0,0) +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file +.TP +\fB\-c\fR, \fB\-\-conf\fR=\fI\,FILE\/\fR +configuration file +.HP +\fB\-n\fR, \fB\-\-outstnum\fR=\fI\,FILE\/\fR output file for stochastic mapping number +.HP +\fB\-a\fR, \fB\-\-outstnumany\fR=\fI\,FILE\/\fR output file for stochastic mapping number any +.HP +\fB\-m\fR, \fB\-\-outsttim\fR=\fI\,FILE\/\fR output file for stochastic mapping duration +.TP +\fB\-p\fR, \fB\-\-periods\fR=\fI\,NUMS\/\fR +comma separated times +.TP +\fB\-l\fR, \fB\-\-logf\fR=\fI\,FILE\/\fR +log file, STOUT otherwise +.TP +\fB\-o\fR, \fB\-\-outanc\fR=\fI\,FILE\/\fR +output file for ancestral calc +.TP +\fB\-s\fR, \fB\-\-silent\fR +less verbose output (default: false) +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2017\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxsw.1.in b/src/man/pxsw.1.in new file mode 100644 index 0000000..89dbe38 --- /dev/null +++ b/src/man/pxsw.1.in @@ -0,0 +1,52 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXSW "1" "July 2021" "pxsw 1.3" "User Commands" +.SH NAME +pxsw \- manual page for pxsw 1.3 +.SH SYNOPSIS +.B pxsw +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Conduct Smith\-Waterman analysis for all the seqs in a file. +This will take fasta, fastq, phylip, and nexus formats from a file or STDIN. +Output is a list of the scores and distances (and the alignments if asked). +.SH OPTIONS +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, STDIN otherwise +.TP +\fB\-a\fR, \fB\-\-outalnf\fR=\fI\,FILE\/\fR +output sequence file, won't output otherwise +.TP +\fB\-t\fR, \fB\-\-seqtype\fR=\fI\,INT\/\fR +sequence type, default=DNA (DNA=0,AA=1) +.TP +\fB\-m\fR, \fB\-\-matrix\fR=\fI\,FILE\/\fR +scoring matrix, default DNA=EDNAFULL, AA=BLOSUM62 +.TP +\fB\-n\fR, \fB\-\-nthreads\fR=\fI\,INT\/\fR +number of threads (open mp), default=2 +.TP +\fB\-v\fR, \fB\-\-verbose\fR +make the output more verbose, turns off parallel +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output score/distance file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2013\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxt2new.1.in b/src/man/pxt2new.1.in new file mode 100644 index 0000000..28bfed6 --- /dev/null +++ b/src/man/pxt2new.1.in @@ -0,0 +1,36 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXT2NEW "1" "July 2021" "pxt2new 1.3" "User Commands" +.SH NAME +pxt2new \- manual page for pxt2new 1.3 +.SH SYNOPSIS +.B pxt2new +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +This will convert a tree file to newick. +This will take a newick\- or nexus\-formatted tree from a file or STDIN. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, STDIN otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output tree file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2014\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxt2nex.1.in b/src/man/pxt2nex.1.in new file mode 100644 index 0000000..4bdbbcd --- /dev/null +++ b/src/man/pxt2nex.1.in @@ -0,0 +1,36 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXT2NEX "1" "July 2021" "pxt2nex 1.3" "User Commands" +.SH NAME +pxt2nex \- manual page for pxt2nex 1.3 +.SH SYNOPSIS +.B pxt2nex +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +This will convert a tree file to vanilla Nexus format. +This will take a newick\- or nexus\-formatted tree from a file or STDIN. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, STDIN otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output tree file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown, Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2021\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxtcol.1.in b/src/man/pxtcol.1.in new file mode 100644 index 0000000..4dc5d2e --- /dev/null +++ b/src/man/pxtcol.1.in @@ -0,0 +1,43 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXTCOL "1" "July 2021" "pxtcol 1.3" "User Commands" +.SH NAME +pxtcol \- manual page for pxtcol 1.3 +.SH SYNOPSIS +.B pxtcol +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Add information to a tree so that you can color the edges. +This will take nexus and newick inputs from a file or STDIN. +Results are written in nexus format so that it can be read by figtree. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, STDIN otherwise +.TP +\fB\-m\fR, \fB\-\-mrcaf\fR=\fI\,FILE\/\fR +file with mrcas and annotations, tab separated +.TP +\fB\-d\fR, \fB\-\-nodeidf\fR=\fI\,FILE\/\fR +file with nodeids (labels) and annotations, tab separated +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2016\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxtcomb.1.in b/src/man/pxtcomb.1.in new file mode 100644 index 0000000..acc79ea --- /dev/null +++ b/src/man/pxtcomb.1.in @@ -0,0 +1,39 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXTCOMB "1" "July 2021" "pxtcomb 1.3" "User Commands" +.SH NAME +pxtcomb \- manual page for pxtcomb 1.3 +.SH SYNOPSIS +.B pxtcomb +[\fI\,OPTIONS\/\fR]... \fI\,FILE\/\fR +.SH DESCRIPTION +Combine a set of trees from one file into a tree from another. +Pass in 2 trees with `t` and `a`. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +reference treefile, STDIN otherwise +.TP +\fB\-a\fR, \fB\-\-addtree\fR=\fI\,FILE\/\fR +alternate treefile +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2017\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxtgen.1.in b/src/man/pxtgen.1.in new file mode 100644 index 0000000..e094098 --- /dev/null +++ b/src/man/pxtgen.1.in @@ -0,0 +1,45 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXTGEN "1" "July 2021" "pxtgen 1.3" "User Commands" +.SH NAME +pxtgen \- manual page for pxtgen 1.3 +.SH SYNOPSIS +.B pxtgen +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Generate all tree topologies for n (<= 10) taxa. +Random tree samples are a\-coming. +.SH OPTIONS +.TP +\fB\-n\fR, \fB\-\-ntax\fR=\fI\,INT\/\fR +number of taxa +.TP +\fB\-r\fR, \fB\-\-rooted\fR +whether generated trees are rooted (default: false) +.TP +\fB\-c\fR, \fB\-\-count\fR +give the number of possible trees for n taxa and exit +.TP +\fB\-l\fR, \fB\-\-label\fR=\fI\,STRING\/\fR +prefix label for taxon names (default: 't') +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2021\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxtlate.1.in b/src/man/pxtlate.1.in new file mode 100644 index 0000000..9ba677a --- /dev/null +++ b/src/man/pxtlate.1.in @@ -0,0 +1,44 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXTLATE "1" "July 2021" "pxtlate 1.3" "User Commands" +.SH NAME +pxtlate \- manual page for pxtlate 1.3 +.SH SYNOPSIS +.B pxtlate +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Translate DNA alignment to amino acids. +This will take fasta, fastq, phylip, and nexus formats from a file or STDIN. +NOTE: assumes sequences are in frame. +.SH OPTIONS +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input nucleotide sequence file, STDIN otherwise +.TP +\fB\-t\fR, \fB\-\-table\fR=\fI\,STRING\/\fR +which translation table to use. currently available: +\&'std' (standard, default) +\&'vmt' (vertebrate mtDNA) +\&'ivmt' (invertebrate mtDNA) +\&'ymt' (yeast mtDNA) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output aa sequence file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph F. Walker, Joseph W. Brown, Stephen A. Smith (blackrim) +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2015\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxtrt.1.in b/src/man/pxtrt.1.in new file mode 100644 index 0000000..0cfe77e --- /dev/null +++ b/src/man/pxtrt.1.in @@ -0,0 +1,48 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXTRT "1" "July 2021" "pxtrt 1.3" "User Commands" +.SH NAME +pxtrt \- manual page for pxtrt 1.3 +.SH SYNOPSIS +.B pxtrt +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +This will trace a big tree given a taxon list and and produce newick. +Data can be read from a file or STDIN. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, STDIN otherwise +.TP +\fB\-n\fR, \fB\-\-names\fR=\fI\,CSL\/\fR +names sep by commas (NO SPACES!) +.TP +\fB\-f\fR, \fB\-\-namesf\fR=\fI\,FILE\/\fR +names in a file (each on a line) +.TP +\fB\-c\fR, \fB\-\-comp\fR +take the complement (i.e. remove any taxa not in list) +.TP +\fB\-s\fR, \fB\-\-silent\fR +suppress warnings of missing tips +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output tree file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Stephen A. Smith (blackrim), Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2017\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxtscale.1.in b/src/man/pxtscale.1.in new file mode 100644 index 0000000..a9c0c2d --- /dev/null +++ b/src/man/pxtscale.1.in @@ -0,0 +1,42 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXTSCALE "1" "July 2021" "pxtscale 1.3" "User Commands" +.SH NAME +pxtscale \- manual page for pxtscale 1.3 +.SH SYNOPSIS +.B pxtscale +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Tree rescaling by providing either scaling factor or root height. +This will take a newick\- or nexus\-formatted tree from a file or STDIN. +Output is written in newick format. +.SH OPTIONS +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, STDIN otherwise +.TP +\fB\-s\fR, \fB\-\-scale\fR=\fI\,DOUBLE\/\fR +edge length scaling factor +.HP +\fB\-r\fR, \fB\-\-rootheight\fR=\fI\,DOUBLE\/\fR height of root (tree must be ultrametric) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2016\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxupgma.1.in b/src/man/pxupgma.1.in new file mode 100644 index 0000000..aade417 --- /dev/null +++ b/src/man/pxupgma.1.in @@ -0,0 +1,37 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXUPGMA "1" "June 2021" "pxupgma 1.2" "User Commands" +.SH NAME +pxupgma \- manual page for pxupgma 1.2 +.SH SYNOPSIS +.B pxupgma +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Bare bones UPGMA tree generator +Currently only uses uncorrected p\-distances. +This will take fasta, fastq, phylip, and nexus formats from a file or STDIN. +.SH OPTIONS +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, STDIN otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output newick file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown, Joseph F. Walker +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2015\-2021 FePhyFoFum +License GPLv3 diff --git a/src/man/pxvcf2fa.1.in b/src/man/pxvcf2fa.1.in new file mode 100644 index 0000000..adc639b --- /dev/null +++ b/src/man/pxvcf2fa.1.in @@ -0,0 +1,40 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.13. +.TH PXVCF2FA "1" "July 2021" "pxvcf2fa 1.3" "User Commands" +.SH NAME +pxvcf2fa \- manual page for pxvcf2fa 1.3 +.SH SYNOPSIS +.B pxvcf2fa +[\fI\,OPTIONS\/\fR]... +.SH DESCRIPTION +Convert vcf file to fasta. +Currently only handles haploid data; phased data will come soon. +Data can be read from a file or STDIN. +.SH OPTIONS +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input vcf file, STDIN otherwise +.TP +\fB\-u\fR, \fB\-\-uppercase\fR +export characters in uppercase +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output fasta sequence file, STOUT otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.TP +\fB\-C\fR, \fB\-\-citation\fR +display phyx citation and exit +.SH CITATION +Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063. +.SH AUTHOR +Written by Joseph W. Brown +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH COPYRIGHT +Copyright \(co 2013\-2021 FePhyFoFum +License GPLv3 diff --git a/src/mataid.f b/src/mataid.f new file mode 100644 index 0000000..f6bde7e --- /dev/null +++ b/src/mataid.f @@ -0,0 +1,1275 @@ +*-------------------------------NOTE-----------------------------------* +* This is an accessory to Expokit and it is not intended to be * +* complete. It is supplied primarily to ensure an unconstrained * +* distribution and portability of the package. The matrix-vector * +* multiplication routines supplied here fit the non symmetric * +* storage and for a symmetric matrix, the entire (not half) matrix * +* is required. If the sparsity pattern is known a priori, it is * +* recommended to use the most advantageous format and to devise * +* the most advantageous matrix-vector multiplication routine. * +*----------------------------------------------------------------------* +*----------------------------------------------------------------------* + subroutine dgcoov ( x, y ) + implicit none + double precision x(*), y(*) +* +*--- Computes y = A*x. A is passed via a fortran `common statement'. +*--- A is assumed here to be under the COOrdinates storage format. +* + integer n, nz, nzmax + parameter( nzmax = 600000 ) + integer ia(nzmax), ja(nzmax) + double precision a(nzmax) + common /RMAT/ a, ia, ja, nz, n + integer i, j + + do j = 1,n + y(j) = 0.0d0 + enddo + do i = 1,nz + y(ia(i)) = y(ia(i)) + a(i)*x(ja(i)) + enddo + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine dgcrsv ( x, y ) + implicit none + double precision x(*), y(*) +* +*--- Computes y = A*x. A is passed via a fortran `common statement'. +*--- A is assumed to be under the Compress Row Storage (CRS) format. +* + integer n, nz, nzmax + parameter( nzmax = 600000 ) + integer ia(nzmax), ja(nzmax) + double precision a(nzmax) + common /RMAT/ a, ia, ja, nz, n + integer i, j + + do i = 1,n + y(i) = 0.0d0 + do j = ia(i),ia(i+1)-1 + y(i) = y(i) + a(j)*x(ja(j)) + enddo + enddo + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine dgccsv( x, y ) + implicit none + double precision x(*), y(*) +* +*--- Computes y = A*x. A is passed via a fortran `common statement'. +*--- A is assumed to be under the Compress Column Storage (CCS) format. +* + integer n, nz, nzmax + parameter( nzmax = 600000 ) + integer ia(nzmax), ja(nzmax) + double precision a(nzmax) + common /RMAT/ a, ia, ja, nz, n + integer i, j + + do i = 1,n + y(i) = 0.0d0 + enddo + do j = 1,n + do i = ja(j),ja(j+1)-1 + y(ia(i)) = y(ia(i)) + a(i)*x(j) + enddo + enddo + end +*----------------------------------------------------------------------| + +*-------------------------------NOTE-----------------------------------* +* This is an accessory to Expokit and it is not intended to be * +* complete. It is supplied primarily to ensure an unconstrained * +* distribution and portability of the package. The matrix-vector * +* multiplication routines supplied here fit the non symmetric * +* storage and for a symmetric matrix, the entire (not half) matrix * +* is required. If the sparsity pattern is known a priori, it is * +* recommended to use the most advantageous format and to devise * +* the most advantageous matrix-vector multiplication routine. * +*----------------------------------------------------------------------* +*----------------------------------------------------------------------* + subroutine zgcoov ( x, y ) + implicit none + complex*16 x(*), y(*) +* +*--- Computes y = A*x. A is passed via a fortran `common statement'. +*--- A is assumed here to be under the COOrdinates storage format. +* + integer n, nz, nzmax + parameter( nzmax = 50000 ) + integer ia(nzmax), ja(nzmax) + complex*16 a(nzmax) + common /CMAT/ a, ia, ja, nz, n + + integer i, j + complex*16 ZERO + parameter( ZERO=(0.0d0,0.0d0) ) + + do j = 1,n + y(j) = ZERO + enddo + do i = 1,nz + y(ia(i)) = y(ia(i)) + a(i)*x(ja(i)) + enddo + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine zgcrsv ( x, y ) + implicit none + complex*16 x(*), y(*) +* +*--- Computes y = A*x. A is passed via a fortran `common statement'. +*--- A is assumed to be under the Compress Row Storage (CRS) format. +* + integer n, nz, nzmax + parameter( nzmax = 50000 ) + integer ia(nzmax), ja(nzmax) + complex*16 a(nzmax) + common /CMAT/ a, ia, ja, nz, n + + integer i, j + complex*16 ZERO + parameter( ZERO=(0.0d0,0.0d0) ) + + do i = 1,n + y(i) = ZERO + do j = ia(i),ia(i+1)-1 + y(i) = y(i) + a(j)*x(ja(j)) + enddo + enddo + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine zgccsv( x, y ) + implicit none + complex*16 x(*), y(*) +* +*--- Computes y = A*x. A is passed via a fortran `common statement'. +*--- A is assumed to be under the Compress Column Storage (CCS) format. +* + integer n, nz, nzmax + parameter( nzmax = 50000 ) + integer ia(nzmax), ja(nzmax) + complex*16 a(nzmax) + common /CMAT/ a, ia, ja, nz, n + + integer i, j + complex*16 ZERO + parameter( ZERO=(0.0d0,0.0d0) ) + + do i = 1,n + y(i) = ZERO + enddo + do j = 1,n + do i = ja(j),ja(j+1)-1 + y(ia(i)) = y(ia(i)) + a(i)*x(j) + enddo + enddo + end +*----------------------------------------------------------------------| + +*----------------------------------------------------------------------| + subroutine DGCNVR( from,to,diag, nrow,ncol, nz, ia, ja, a, iwsp ) + + implicit none + character from*3, to*3, diag*1 + integer nrow, ncol, nz, ia(*), ja(*), iwsp(*) + double precision a(*) + +*-----Purpose----------------------------------------------------------| +* +*--- DGCNVR converts a sparse storage format into another sparse +* storage format. The matrix can be rectangular. +* +*-----Arguments--------------------------------------------------------| +* +* from : (input, character*3) the storage format holding the +* matrix on input. Accepted values are: +* 'COO' : COOrdinates +* 'CRS' : Compressed Row Storage +* 'CCS' : Compressed Column Storage. +* +* to : (input, character*3) the storage format holding the +* matrix on output. Same accepted values as above. +* +* diag : (input, character*1) specifies whether or not the +* entire diagonal should be lodged, i.e., including +* null diagonal entries. (This may be required by +* some applications that make use of the locations +* of diagonal elements.) +* diag = 'N', no specific attention is given to diagonal +* elements. +* diag = 'D', the entire diagonal is lodged, including +* null elements on the diagonal. +* if from=to & diag='D', null diagonal entries are +* explicitly inserted in the actual matrix. +* +* nrow : (input) number of rows in the matrix. +* +* ncol : (input) number of columns in the matrix. +* +* nz : (input/output) number of non-zeros elements. +* If diag='D' and null diagonal entries are inserted, then +* nz is updated on exit and contains the effective number +* of entries stored. In what follows, nz' (read nz prime) +* denotes the updated value of nz, nz <= nz' <= nz+n. +* If diag='N' then nz'=nz. +* +* ia(*) : (input/output) of declared length .ge. nz'. +* On input, +* if from='CRS', ia(1:nrow+1) contains pointers for the +* beginning of each row. +* if from='COO', or 'CCS', ia(1:nz) contains row indices. +* On output, +* if to='CRS', ia(1:nrow+1) contains pointers for the +* beginning of each row. +* if to='COO' or 'CCS', ia(1:nz') contains row indices +* in increasing order in each column. +* +* ja(*) : (input/output) of declared length .ge. nz'. +* On input, +* if from='CRS', ja(1:ncol+1) contains pointers for the +* beginning of each column. +* if from='COO' or 'CCS', ja(1:nz) contains col. indices. +* On output, +* if to='CRS', ja(1:ncol+1) contains pointers for the +* beginning of each column. +* if to='COO' or 'CCS', ja(1:nz') contains column indices +* in increasing order in each row. +* +* a(*) : (input/output) On input, a(1:nz) fits the input format +* and on output, a(1:nz') fits the output format. +* +* iwsp(*) : (workspace) of declared length .ge. max(nrow,ncol). +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* Department of Mathematics, University of Queensland. +* Brisbane QLD 4072, Australia. 1996. +*----------------------------------------------------------------------| + + integer i, j, k, nn, iflag + character cpy_from*3, cpy_to*3, cpy_diag*1, c*1, S1*3, S2*3 + logical LSAME + + intrinsic CHAR,ICHAR,LLE,LGE,MIN + LSAME(S1,S2) = LLE(S1,S2).and.LGE(S1,S2) +* +*--- upper case strings ... +* + do k = 1,3 + c = from(k:k) + if ( c.ge.'a' .and. c.le.'z' ) c = CHAR( ICHAR(c)-32 ) + cpy_from(k:k) = c + c = to(k:k) + if ( c.ge.'a' .and. c.le.'z' ) c = CHAR( ICHAR(c)-32 ) + cpy_to(k:k) = c + enddo + c = diag(1:1) + if ( c.ge.'a' .and. c.le.'z' ) c = CHAR( ICHAR(c)-32 ) + cpy_diag = c + +*--- quick return if possible ... + if ( LSAME(cpy_from,cpy_to) .and. cpy_diag.eq.'N' ) return + iflag = 1 + if ( LSAME(cpy_from,'COO') ) iflag = 0 + if ( LSAME(cpy_from,'CRS') ) iflag = 0 + if ( LSAME(cpy_from,'CCS') ) iflag = 0 + if ( iflag.ne.0 ) stop 'unexpected i/o formats (in DGCNVR)' + iflag = 1 + if ( LSAME(cpy_to,'COO') ) iflag = 0 + if ( LSAME(cpy_to,'CRS') ) iflag = 0 + if ( LSAME(cpy_to,'CCS') ) iflag = 0 + if ( iflag.ne.0 ) stop 'unexpected i/o formats (in DGCNVR)' + +* +*--- transit via COOrdinates format if input is not in COO ... +* + if ( LSAME(cpy_from,'CRS') ) then +*--- expand ia indices ... + nn = nz + do i = nrow,1,-1 + do k = 1,ia(i+1)-ia(i) + ia(nn) = i + nn = nn-1 + enddo + enddo + endif + if ( LSAME(cpy_from,'CCS') ) then +*--- expand ja indices ... + nn = nz + do j = ncol,1,-1 + do k = 1,ja(j+1)-ja(j) + ja(nn) = j + nn = nn-1 + enddo + enddo + endif +* +*-- if requested, insert diagonal elements even if they are zero... +* + if ( cpy_diag.eq.'D' ) then + nn = MIN( nrow,ncol ) + do i = 1,nn + iwsp(i) = 0 + enddo + do k = 1,nz + if ( ia(k).eq.ja(k) ) iwsp(ia(k)) = 1 + enddo + do i = 1,nn + if ( iwsp(i).eq.0 ) then + nz = nz + 1 + ia(nz) = i + ja(nz) = i + a(nz) = 0.0d0 + endif + enddo + endif + +*--- COO convertion ... + if ( LSAME(cpy_to,'COO') ) return + +*--- CRS convertion ... + if ( LSAME(cpy_to,'CRS') ) call dcmpac( nrow,nz,ia,ja,a, iwsp ) + +*--- CCS convertion ... + if ( LSAME(cpy_to,'CCS') ) call dcmpac( ncol,nz,ja,ia,a, iwsp ) + + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| +* + subroutine dcmpac( n, nx, ix, ixx, xx, iwsp ) +*-- DCMPAC compacts the array ix and sorts ixx and xx +*-- (This is a gateway routine for DGCNVR) ... +*----------------------------------------------------------------------| + + implicit none + integer n, nx, ix(nx), ixx(nx), iwsp(n) + double precision xx(nx) + integer k +* +*--- sort ix and carry ixx and xx along ... +* + call idsrt2( nx, ix, ixx, xx ) +* +*--- adjust pointers ... +* + do k = 1,n + iwsp(k) = 0 + enddo + do k = 1,nx + iwsp(ix(k)) = iwsp(ix(k)) + 1 + enddo + ix(n+1) = nx + 1 + do k = n,1,-1 + ix(k) = ix(k+1)-iwsp(k) + enddo +* +*--- sort ixx in increasing order and carry xx along ... +* + do k = 1,n + call idsrt1( iwsp(k), ixx(ix(k)), xx(ix(k)) ) + enddo + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| +* + subroutine idsrt1( nx, ix, xx ) + +*--- IDSRT1: indirect sort -- sort ix and carry xx along +*--- adapted from a SLAP (Sparse Linear Algebra Package) code. +*----------------------------------------------------------------------| + + implicit none + integer nx, ix(nx) + double precision xx(nx) + + integer M,I,J,K,IL(21),IU(21), IT,IIT,IJ,L + double precision TX, TTX, R + + if ( nx.le.1 ) return + +*--- And now...Just a little black magic... + M = 1 + I = 1 + J = NX + R = .375 + 210 IF( R.LE.0.5898437 ) THEN + R = R + 3.90625E-2 + ELSE + R = R-.21875 + ENDIF + 225 K = I +* +*--- Select a central element of the array and save it in location +*--- IT, TX. +* + IJ = I + IDINT( DBLE(J-I)*R ) + IT = IX(IJ) + TX = XX(IJ) +* +*--- If first element of array is greater than IT, interchange with IT. +* + IF( IX(I).GT.IT ) THEN + IX(IJ) = IX(I) + IX(I) = IT + IT = IX(IJ) + XX(IJ) = XX(I) + XX(I) = TX + TX = XX(IJ) + ENDIF + L=J +* +*--- If last element of array is less than IT, swap with IT. +* + IF( IX(J).LT.IT ) THEN + IX(IJ) = IX(J) + IX(J) = IT + IT = IX(IJ) + XX(IJ) = XX(J) + XX(J) = TX + TX = XX(IJ) +* +*--- If first element of array is greater than IT, swap with IT. +* + IF ( IX(I).GT.IT ) THEN + IX(IJ) = IX(I) + IX(I) = IT + IT = IX(IJ) + XX(IJ) = XX(I) + XX(I) = TX + TX = XX(IJ) + ENDIF + ENDIF +* +*--- Find an element in the second half of the array which is +*--- smaller than IT. +* + 240 L=L-1 + IF( IX(L).GT.IT ) GO TO 240 +* +*--- Find an element in the first half of the array which is +*--- greater than IT. +* + 245 K=K+1 + IF( IX(K).LT.IT ) GO TO 245 +* +*--- Interchange these elements. +* + IF( K.LE.L ) THEN + IIT = IX(L) + IX(L) = IX(K) + IX(K) = IIT + TTX = XX(L) + XX(L) = XX(K) + XX(K) = TTX + GOTO 240 + ENDIF +* +*--- Save upper and lower subscripts of the array yet to be sorted. +* + IF( L-I.GT.J-K ) THEN + IL(M) = I + IU(M) = L + I = K + M = M+1 + ELSE + IL(M) = K + IU(M) = J + J = L + M = M+1 + ENDIF + GO TO 260 +* +*--- Begin again on another portion of the unsorted array. +* + 255 M = M-1 + IF( M.EQ.0 ) GO TO 300 + I = IL(M) + J = IU(M) + 260 IF( J-I.GE.1 ) GO TO 225 + IF( I.EQ.J ) GO TO 255 + IF( I.EQ.1 ) GO TO 210 + I = I-1 + 265 I = I+1 + IF( I.EQ.J ) GO TO 255 + IT = IX(I+1) + TX = XX(I+1) + IF( IX(I).LE.IT ) GO TO 265 + K=I + 270 IX(K+1) = IX(K) + XX(K+1) = XX(K) + K = K-1 + IF( IT.LT.IX(K) ) GO TO 270 + IX(K+1) = IT + XX(K+1) = TX + GO TO 265 + + 300 CONTINUE + RETURN + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine idsrt2( nx, ix, ixx, xx ) + +*--- IDSRT2: indirect sort: sort ix and carry ixx and xx along +*--- adapted from a SLAP (Sparse Linear Algebra Package) code. +*----------------------------------------------------------------------| + + implicit none + integer nx, ix(nx), ixx(nx) + double precision xx(nx) + + integer M,I,J,K,IL(21),IU(21), IT,IIT,IJ,JT,JJT,L + double precision TX, TTX, R + + if ( nx.le.1 ) return + +*--- And now...Just a little black magic... + M = 1 + I = 1 + J = NX + R = .375 + 210 IF( R.LE.0.5898437 ) THEN + R = R + 3.90625E-2 + ELSE + R = R-.21875 + ENDIF + 225 K = I +* +*--- Select a central element of the array and save it in location +*--- IT, JT, TX. +* + IJ = I + IDINT( DBLE(J-I)*R ) + IT = IX(IJ) + JT = IXX(IJ) + TX = XX(IJ) +* +*--- If first element of array is greater than IT, interchange with IT. +* + IF( IX(I).GT.IT ) THEN + IX(IJ) = IX(I) + IX(I) = IT + IT = IX(IJ) + IXX(IJ)= IXX(I) + IXX(I) = JT + JT = IXX(IJ) + XX(IJ) = XX(I) + XX(I) = TX + TX = XX(IJ) + ENDIF + L=J +* +*--- If last element of array is less than IT, swap with IT. +* + IF( IX(J).LT.IT ) THEN + IX(IJ) = IX(J) + IX(J) = IT + IT = IX(IJ) + IXX(IJ)= IXX(J) + IXX(J) = JT + JT = IXX(IJ) + XX(IJ) = XX(J) + XX(J) = TX + TX = XX(IJ) +* +*--- If first element of array is greater than IT, swap with IT. +* + IF ( IX(I).GT.IT ) THEN + IX(IJ) = IX(I) + IX(I) = IT + IT = IX(IJ) + IXX(IJ)= IXX(I) + IXX(I) = JT + JT = IXX(IJ) + XX(IJ) = XX(I) + XX(I) = TX + TX = XX(IJ) + ENDIF + ENDIF +* +*--- Find an element in the second half of the array which is +*--- smaller than IT. +* + 240 L=L-1 + IF( IX(L).GT.IT ) GO TO 240 +* +*--- Find an element in the first half of the array which is +*--- greater than IT. +* + 245 K=K+1 + IF( IX(K).LT.IT ) GO TO 245 +* +*--- Interchange these elements. +* + IF( K.LE.L ) THEN + IIT = IX(L) + IX(L) = IX(K) + IX(K) = IIT + JJT = IXX(L) + IXX(L)= IXX(K) + IXX(K)= JJT + TTX = XX(L) + XX(L) = XX(K) + XX(K) = TTX + GOTO 240 + ENDIF +* +*--- Save upper and lower subscripts of the array yet to be sorted. +* + IF( L-I.GT.J-K ) THEN + IL(M) = I + IU(M) = L + I = K + M = M+1 + ELSE + IL(M) = K + IU(M) = J + J = L + M = M+1 + ENDIF + GO TO 260 +* +*--- Begin again on another portion of the unsorted array. +* + 255 M = M-1 + IF( M.EQ.0 ) GO TO 300 + I = IL(M) + J = IU(M) + 260 IF( J-I.GE.1 ) GO TO 225 + IF( I.EQ.J ) GO TO 255 + IF( I.EQ.1 ) GO TO 210 + I = I-1 + 265 I = I+1 + IF( I.EQ.J ) GO TO 255 + IT = IX(I+1) + JT = IXX(I+1) + TX = XX(I+1) + IF( IX(I).LE.IT ) GO TO 265 + K=I + 270 IX(K+1) = IX(K) + IXX(K+1) = IXX(K) + XX(K+1) = XX(K) + K = K-1 + IF( IT.LT.IX(K) ) GO TO 270 + IX(K+1) = IT + IXX(K+1) = JT + XX(K+1) = TX + GO TO 265 + + 300 CONTINUE + RETURN + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine ZGCNVR( from,to,diag, nrow,ncol, nz, ia, ja, a, iwsp ) + + implicit none + character from*3, to*3, diag*1 + integer nrow, ncol, nz, ia(*), ja(*), iwsp(*) + complex*16 a(*) + +*-----Purpose----------------------------------------------------------| +* +*--- ZGCNVR transforms a sparse storage format into another sparse +* storage format. The matrix can be rectangular. +* This is the complex counterpart of DGCNVR. +* +*-----Arguments--------------------------------------------------------| +* +* from : (input, character*3) the storage format holding the +* matrix on input. Accepted values are: +* 'COO' : COOrdinates +* 'CRS' : Compressed Row Storage +* 'CCS' : Compressed Column Storage. +* +* to : (input, character*3) the storage format holding the +* matrix on output. Same accepted values as above. +* +* diag : (input, character*1) specifies whether or not the +* entire diagonal should be lodged, i.e., including +* null diagonal entries. (This may be required by +* some applications that make use of the locations +* of diagonal elements.) +* diag = 'N', no specific attention is given to diagonal +* elements. +* diag = 'D', the entire diagonal is lodged, including +* null elements on the diagonal. +* if from=to & diag='D', null diagonal entries are +* explicitly inserted in the actual matrix. +* +* nrow : (input) number of rows in the matrix. +* +* ncol : (input) number of columns in the matrix. +* +* nz : (input/output) number of non-zeros elements. +* If diag='D' and null diagonal entries are inserted, then +* nz is updated on exit and contains the effective number +* of entries stored. In what follows, nz' (read nz prime) +* denotes the updated value of nz, nz <= nz' <= nz+n. +* If diag='N' then nz'=nz. +* +* ia(*) : (input/output) of declared length .ge. nz'. +* On input, +* if from='CRS', ia(1:nrow+1) contains pointers for the +* beginning of each row. +* if from='COO', or 'CCS', ia(1:nz) contains row indices. +* On output, +* if to='CRS', ia(1:nrow+1) contains pointers for the +* beginning of each row. +* if to='COO' or 'CCS', ia(1:nz') contains row indices +* in increasing order in each column. +* +* ja(*) : (input/output) of declared length .ge. nz'. +* On input, +* if from='CRS', ja(1:ncol+1) contains pointers for the +* beginning of each column. +* if from='COO' or 'CCS', ja(1:nz) contains col. indices. +* On output, +* if to='CRS', ja(1:ncol+1) contains pointers for the +* beginning of each column. +* if to='COO' or 'CCS', ja(1:nz') contains column indices +* in increasing order in each row. +* +* a(*) : (input/output) On input, a(1:nz) fits the input format +* and on output, a(1:nz') fits the output format. +* +* iwsp(*) : (workspace) of declared length .ge. max(nrow,ncol). +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* Department of Mathematics, University of Queensland. +* Brisbane QLD 4072, Australia. 1996. +*----------------------------------------------------------------------| + + integer i, j, k, nn, iflag + character cpy_from*3, cpy_to*3, cpy_diag*1, c*1, S1*3, S2*3 + logical LSAME + + intrinsic CHAR,ICHAR,LLE,LGE,MIN + LSAME(S1,S2) = LLE(S1,S2).and.LGE(S1,S2) +* +*--- upper case strings ... +* + do k = 1,3 + c = from(k:k) + if ( c.ge.'a' .and. c.le.'z' ) c = CHAR( ICHAR(c)-32 ) + cpy_from(k:k) = c + c = to(k:k) + if ( c.ge.'a' .and. c.le.'z' ) c = CHAR( ICHAR(c)-32 ) + cpy_to(k:k) = c + enddo + c = diag(1:1) + if ( c.ge.'a' .and. c.le.'z' ) c = CHAR( ICHAR(c)-32 ) + cpy_diag = c + +*--- quick return if possible ... + if ( LSAME(cpy_from,cpy_to) .and. cpy_diag.eq.'N' ) return + iflag = 1 + if ( LSAME(cpy_from,'COO') ) iflag = 0 + if ( LSAME(cpy_from,'CRS') ) iflag = 0 + if ( LSAME(cpy_from,'CCS') ) iflag = 0 + if ( iflag.ne.0 ) stop 'unexpected i/o formats (in ZGCNVR)' + iflag = 1 + if ( LSAME(cpy_to,'COO') ) iflag = 0 + if ( LSAME(cpy_to,'CRS') ) iflag = 0 + if ( LSAME(cpy_to,'CCS') ) iflag = 0 + if ( iflag.ne.0 ) stop 'unexpected i/o formats (in ZGCNVR)' + +* +*--- transit via COOrdinates format if input is not in COO ... +* + if ( LSAME(cpy_from,'CRS') ) then +*--- expand ia indices ... + nn = nz + do i = nrow,1,-1 + do k = 1,ia(i+1)-ia(i) + ia(nn) = i + nn = nn-1 + enddo + enddo + endif + if ( LSAME(cpy_from,'CCS') ) then +*--- expand ja indices ... + nn = nz + do j = ncol,1,-1 + do k = 1,ja(j+1)-ja(j) + ja(nn) = j + nn = nn-1 + enddo + enddo + endif +* +*-- if requested, insert diagonal elements even if they are zero... +* + if ( cpy_diag.eq.'D' ) then + nn = MIN( nrow,ncol ) + do i = 1,nn + iwsp(i) = 0 + enddo + do k = 1,nz + if ( ia(k).eq.ja(k) ) iwsp(ia(k)) = 1 + enddo + do i = 1,nn + if ( iwsp(i).eq.0 ) then + nz = nz + 1 + ia(nz) = i + ja(nz) = i + a(nz) = 0.0d0 + endif + enddo + endif + +*--- COO convertion ... + if ( LSAME(cpy_to,'COO') ) return + +*--- CRS convertion ... + if ( LSAME(cpy_to,'CRS') ) call zcmpac( nrow,nz,ia,ja,a, iwsp ) + +*--- CCS convertion ... + if ( LSAME(cpy_to,'CCS') ) call zcmpac( ncol,nz,ja,ia,a, iwsp ) + + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| +* + subroutine zcmpac( n, nx, ix, ixx, xx, iwsp ) +*-- ZCMPAC compacts the array ix and sorts ixx and xx +*-- (This is a gateway routine for ZGCNVR) ... +*----------------------------------------------------------------------| + + implicit none + integer n, nx, ix(nx), ixx(nx), iwsp(n) + complex*16 xx(nx) + integer k +* +*--- sort ix and carry ixx and xx along ... +* + call izsrt2( nx, ix, ixx, xx ) +* +*--- adjust pointers ... +* + do k = 1,n + iwsp(k) = 0 + enddo + do k = 1,nx + iwsp(ix(k)) = iwsp(ix(k)) + 1 + enddo + ix(n+1) = nx + 1 + do k = n,1,-1 + ix(k) = ix(k+1)-iwsp(k) + enddo +* +*--- sort ixx in increasing order and carry xx along ... +* + do k = 1,n + call izsrt1( iwsp(k), ixx(ix(k)), xx(ix(k)) ) + enddo + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| +* + subroutine izsrt1( nx, ix, xx ) + +*--- IZSRT1: indirect sort -- sort ix and carry xx along +*--- adapted from a SLAP (Sparse Linear Algebra Package) code. +*----------------------------------------------------------------------| + + implicit none + integer nx, ix(nx) + complex*16 xx(nx) + + integer M,I,J,K,IL(21),IU(21), IT,IIT,IJ,L + complex*16 TX, TTX + double precision R + + if ( nx.le.1 ) return + +*--- And now...Just a little black magic... + M = 1 + I = 1 + J = NX + R = .375 + 210 IF( R.LE.0.5898437 ) THEN + R = R + 3.90625E-2 + ELSE + R = R-.21875 + ENDIF + 225 K = I +* +*--- Select a central element of the array and save it in location +*--- IT, TX. +* + IJ = I + IDINT( DBLE(J-I)*R ) + IT = IX(IJ) + TX = XX(IJ) +* +*--- If first element of array is greater than IT, interchange with IT. +* + IF( IX(I).GT.IT ) THEN + IX(IJ) = IX(I) + IX(I) = IT + IT = IX(IJ) + XX(IJ) = XX(I) + XX(I) = TX + TX = XX(IJ) + ENDIF + L=J +* +*--- If last element of array is less than IT, swap with IT. +* + IF( IX(J).LT.IT ) THEN + IX(IJ) = IX(J) + IX(J) = IT + IT = IX(IJ) + XX(IJ) = XX(J) + XX(J) = TX + TX = XX(IJ) +* +*--- If first element of array is greater than IT, swap with IT. +* + IF ( IX(I).GT.IT ) THEN + IX(IJ) = IX(I) + IX(I) = IT + IT = IX(IJ) + XX(IJ) = XX(I) + XX(I) = TX + TX = XX(IJ) + ENDIF + ENDIF +* +*--- Find an element in the second half of the array which is +*--- smaller than IT. +* + 240 L=L-1 + IF( IX(L).GT.IT ) GO TO 240 +* +*--- Find an element in the first half of the array which is +*--- greater than IT. +* + 245 K=K+1 + IF( IX(K).LT.IT ) GO TO 245 +* +*--- Interchange these elements. +* + IF( K.LE.L ) THEN + IIT = IX(L) + IX(L) = IX(K) + IX(K) = IIT + TTX = XX(L) + XX(L) = XX(K) + XX(K) = TTX + GOTO 240 + ENDIF +* +*--- Save upper and lower subscripts of the array yet to be sorted. +* + IF( L-I.GT.J-K ) THEN + IL(M) = I + IU(M) = L + I = K + M = M+1 + ELSE + IL(M) = K + IU(M) = J + J = L + M = M+1 + ENDIF + GO TO 260 +* +*--- Begin again on another portion of the unsorted array. +* + 255 M = M-1 + IF( M.EQ.0 ) GO TO 300 + I = IL(M) + J = IU(M) + 260 IF( J-I.GE.1 ) GO TO 225 + IF( I.EQ.J ) GO TO 255 + IF( I.EQ.1 ) GO TO 210 + I = I-1 + 265 I = I+1 + IF( I.EQ.J ) GO TO 255 + IT = IX(I+1) + TX = XX(I+1) + IF( IX(I).LE.IT ) GO TO 265 + K=I + 270 IX(K+1) = IX(K) + XX(K+1) = XX(K) + K = K-1 + IF( IT.LT.IX(K) ) GO TO 270 + IX(K+1) = IT + XX(K+1) = TX + GO TO 265 + + 300 CONTINUE + RETURN + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine izsrt2( nx, ix, ixx, xx ) + +*--- IZSRT2: indirect sort: sort ix and carry ixx and xx along +*--- adapted from a SLAP (Sparse Linear Algebra Package) code. +*----------------------------------------------------------------------| + + implicit none + integer nx, ix(nx), ixx(nx) + complex*16 xx(nx) + + integer M,I,J,K,IL(21),IU(21), IT,IIT,IJ,JT,JJT,L + complex*16 TX, TTX + double precision R + + if ( nx.le.1 ) return + +*--- And now...Just a little black magic... + M = 1 + I = 1 + J = NX + R = .375 + 210 IF( R.LE.0.5898437 ) THEN + R = R + 3.90625E-2 + ELSE + R = R-.21875 + ENDIF + 225 K = I +* +*--- Select a central element of the array and save it in location +*--- IT, JT, TX. +* + IJ = I + IDINT( DBLE(J-I)*R ) + IT = IX(IJ) + JT = IXX(IJ) + TX = XX(IJ) +* +*--- If first element of array is greater than IT, interchange with IT. +* + IF( IX(I).GT.IT ) THEN + IX(IJ) = IX(I) + IX(I) = IT + IT = IX(IJ) + IXX(IJ)= IXX(I) + IXX(I) = JT + JT = IXX(IJ) + XX(IJ) = XX(I) + XX(I) = TX + TX = XX(IJ) + ENDIF + L=J +* +*--- If last element of array is less than IT, swap with IT. +* + IF( IX(J).LT.IT ) THEN + IX(IJ) = IX(J) + IX(J) = IT + IT = IX(IJ) + IXX(IJ)= IXX(J) + IXX(J) = JT + JT = IXX(IJ) + XX(IJ) = XX(J) + XX(J) = TX + TX = XX(IJ) +* +*--- If first element of array is greater than IT, swap with IT. +* + IF ( IX(I).GT.IT ) THEN + IX(IJ) = IX(I) + IX(I) = IT + IT = IX(IJ) + IXX(IJ)= IXX(I) + IXX(I) = JT + JT = IXX(IJ) + XX(IJ) = XX(I) + XX(I) = TX + TX = XX(IJ) + ENDIF + ENDIF +* +*--- Find an element in the second half of the array which is +*--- smaller than IT. +* + 240 L=L-1 + IF( IX(L).GT.IT ) GO TO 240 +* +*--- Find an element in the first half of the array which is +*--- greater than IT. +* + 245 K=K+1 + IF( IX(K).LT.IT ) GO TO 245 +* +*--- Interchange these elements. +* + IF( K.LE.L ) THEN + IIT = IX(L) + IX(L) = IX(K) + IX(K) = IIT + JJT = IXX(L) + IXX(L)= IXX(K) + IXX(K)= JJT + TTX = XX(L) + XX(L) = XX(K) + XX(K) = TTX + GOTO 240 + ENDIF +* +*--- Save upper and lower subscripts of the array yet to be sorted. +* + IF( L-I.GT.J-K ) THEN + IL(M) = I + IU(M) = L + I = K + M = M+1 + ELSE + IL(M) = K + IU(M) = J + J = L + M = M+1 + ENDIF + GO TO 260 +* +*--- Begin again on another portion of the unsorted array. +* + 255 M = M-1 + IF( M.EQ.0 ) GO TO 300 + I = IL(M) + J = IU(M) + 260 IF( J-I.GE.1 ) GO TO 225 + IF( I.EQ.J ) GO TO 255 + IF( I.EQ.1 ) GO TO 210 + I = I-1 + 265 I = I+1 + IF( I.EQ.J ) GO TO 255 + IT = IX(I+1) + JT = IXX(I+1) + TX = XX(I+1) + IF( IX(I).LE.IT ) GO TO 265 + K=I + 270 IX(K+1) = IX(K) + IXX(K+1) = IXX(K) + XX(K+1) = XX(K) + K = K-1 + IF( IT.LT.IX(K) ) GO TO 270 + IX(K+1) = IT + IXX(K+1) = JT + XX(K+1) = TX + GO TO 265 + + 300 CONTINUE + RETURN + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine LOADHB( filename, spformat, n, nz, ia, ja, a, iwsp ) + + implicit none + character filename*80, spformat*3 + integer n, nz, ia(*), ja(*), iwsp(*) + double precision a(*) + +*--- Purpose ---------------------------------------------------------| +* +*--- LOADHB loads a matrix stored under the Harwell-Boeing format +* and renders it into the sparse format specified by spformat. +* +*--- Arguments -------------------------------------------------------| +* +* filename (input) +* name of the file containing the matrix. +* must end with a '$', i.e., filename is in the form: '...$' +* +* spformat (input) +* sparse format in which the matrix is forced to be on output +* accepted values are: +* 'COO' : COOrdinates +* 'CRS' : Compressed Row Storage +* 'CCS' : Compressed Column Storage (default H-B format) +* +* n (input/output) +* On input, the maximum allowable order +* On output, the actual order of the matrix loaded +* +* nz (input/output) +* On input, the maximum allowable number of non zero entries +* On output, the actual number of non zero entries +* +* ia,ja,a (output) +* sparse matrix data stored in the format given in spformat +* sufficient room is needed to achieve this: each component +* must be of length >= nz. If the matrix is symmetric, both +* lower and upper parts are included explicitly +* +* iwsp (workspace) of length >= n +* +*----------------------------------------------------------------------| +* + character title*72, key*8, type*3, ptrfmt*16, + . indfmt*16, valfmt*20, rhsfmt*20, rhstyp*1 + integer totcrd, ptrcrd, indcrd, valcrd, rhscrd, nrow, + . nrhs, nrhsix, i, j, k, io, nn, nnz + intrinsic INDEX +*--- + i = INDEX( filename,'$' ) - 1 + if ( i.le.0 ) stop 'in LOADHB. Bad filename' + open( UNIT=7, STATUS='old', IOstat=io, FILE=filename(1:i) ) + if ( io.ne.0 ) stop 'Could not access Harwell-Boeing matrix' + read( UNIT=7,FMT=10 ) title, key, + . totcrd, ptrcrd, indcrd, valcrd, rhscrd, + . type, nrow, nn, nnz, nrhs, + . ptrfmt, indfmt, valfmt, rhsfmt + print*, title,'type :',type,' size :',nrow,nn + print*,'order :',nn,' number of nonzero :',nnz + + if ( nn.gt.n ) stop 'in LOADHB. Please increase n' + if ( nnz.gt.nz ) stop 'in LOADHB. Please increase nz' + +*--- leave if there is no values ... + if ( valcrd.le.0 ) stop 'Empty Harwell-Boeing matrix' + if ( rhscrd.gt.0 ) then + read( UNIT=7,FMT=11 ) rhstyp, nrhs, nrhsix + print*,'There is a second hand' + endif + +*--- read data... + read( UNIT=7,FMT=ptrfmt ) (ja(i), i = 1,nn+1) + read( UNIT=7,FMT=indfmt ) (ia(i), i = 1,nnz) + read( UNIT=7,FMT=valfmt ) (a(i), i = 1,nnz) + close( UNIT=7 ) + +*--- for the sake of experiments, store both parts if symmetric matrix + if ( type.eq.'RSA' ) then +*--- expand ja indices ... + k = nnz + do j = nn,1,-1 + do i = 1,ja(j+1)-ja(j) + ja(k) = j + k = k-1 + enddo + enddo +*--- insert the other half ... + k = nnz + do i = 1,k + if ( ia(i).ne.ja(i) ) then + nnz = nnz + 1 + if ( nnz.gt.nz ) stop 'in LOADHB. Please increase nz' + ia(nnz) = ja(i) + ja(nnz) = ia(i) + a(nnz) = a(i) + endif + enddo + type = 'COO' + else + type = 'CCS' + endif + call dgcnvr( type,spformat,'n', nn,nn, nnz, ia, ja, a, iwsp ) + n = nn + nz = nnz + + print*,'Harwell-Boeing matrix loaded' +10 format(A72, A8/ 5i14 / A3, 11x, 4i14 / 2a16, 2a20) +11 format(A1, 13x, 2i14) + end +*----------------------------------------------------------------------| diff --git a/src/my_expokit.f b/src/my_expokit.f new file mode 100644 index 0000000..e863b1f --- /dev/null +++ b/src/my_expokit.f @@ -0,0 +1,4644 @@ +*----------------------------------------------------------------------| + subroutine myDMEXPV( n, m, t, v, w, tol, anorm, + . wsp,lwsp, iwsp,liwsp, itrace,iflag,ia,ja,a,nz ) + + implicit none + integer n,nz,m,lwsp,liwsp, itrace,iflag,iwsp(liwsp),ia(nz),ja(nz) + double precision t, tol, anorm, v(n), w(n), wsp(lwsp), a(nz) + +*-----Purpose----------------------------------------------------------| +* +*--- DMEXPV computes w = exp(t*A)*v - Customised for MARKOV CHAINS. +* +* It does not compute the matrix exponential in isolation but +* instead, it computes directly the action of the exponential +* operator on the operand vector. This way of doing so allows +* for addressing large sparse problems. +* +* The method used is based on Krylov subspace projection +* techniques and the matrix under consideration interacts only +* via the external routine `matvec' performing the matrix-vector +* product (matrix-free method). +* +* This is a customised version for Markov Chains. This means that a +* check is done within this code to ensure that the resulting vector +* w is a probability vector, i.e., w must have all its components +* in [0,1], with sum equal to 1. This check is done at some expense +* and the user may try DGEXPV which is cheaper since it ignores +* probability constraints. +* +* IMPORTANT: The check assumes that the transition rate matrix Q +* satisfies Qe = 0, where e=(1,...,1)'. Don't use DMEXPV +* if this condition does not hold. Use DGEXPV instead. +* DMEXPV/DGEXPV require the matrix-vector product +* y = A*x = Q'*x, i.e, the TRANSPOSE of Q times a vector. +* Failure to remember this leads to wrong results. +* +*-----Arguments--------------------------------------------------------| +* +* n : (input) order of the principal matrix A. +* +* m : (input) maximum size for the Krylov basis. +* +* t : (input) time at wich the solution is needed (can be < 0). +* +* v(n) : (input) given operand vector. +* +* w(n) : (output) computed approximation of exp(t*A)*v. +* +* tol : (input/output) the requested acurracy tolerance on w. +* If on input tol=0.0d0 or tol is too small (tol.le.eps) +* the internal value sqrt(eps) is used, and tol is set to +* sqrt(eps) on output (`eps' denotes the machine epsilon). +* (`Happy breakdown' is assumed if h(j+1,j) .le. anorm*tol) +* +* anorm : (input) an approximation of some norm of A. +* +* wsp(lwsp): (workspace) lwsp .ge. n*(m+1)+n+(m+2)^2+4*(m+2)^2+ideg+1 +* +---------+-------+---------------+ +* (actually, ideg=6) V H wsp for PADE +* +* iwsp(liwsp): (workspace) liwsp .ge. m+2 +* +* matvec : external subroutine for matrix-vector multiplication. +* synopsis: matvec( x, y ) +* double precision x(*), y(*) +* computes: y(1:n) <- A*x(1:n) +* where A is the principal matrix. +* +* IMPORTANT: DMEXPV requires the product y = Ax = Q'x, i.e. +* the TRANSPOSE of the transition rate matrix. +* +* itrace : (input) running mode. 0=silent, 1=print step-by-step info +* +* iflag : (output) exit flag. +* <0 - bad input arguments +* 0 - no problem +* 1 - maximum number of steps reached without convergence +* 2 - requested tolerance was too high +* +*-----Accounts on the computation--------------------------------------| +* Upon exit, an interested user may retrieve accounts on the +* computations. They are located in the workspace arrays wsp and +* iwsp as indicated below: +* +* location mnemonic description +* -----------------------------------------------------------------| +* iwsp(1) = nmult, number of matrix-vector multiplications used +* iwsp(2) = nexph, number of Hessenberg matrix exponential evaluated +* iwsp(3) = nscale, number of repeated squaring involved in Pade +* iwsp(4) = nstep, number of integration steps used up to completion +* iwsp(5) = nreject, number of rejected step-sizes +* iwsp(6) = ibrkflag, set to 1 if `happy breakdown' and 0 otherwise +* iwsp(7) = mbrkdwn, if `happy brkdown', basis-size when it occured +* -----------------------------------------------------------------| +* wsp(1) = step_min, minimum step-size used during integration +* wsp(2) = step_max, maximum step-size used during integration +* wsp(3) = x_round, maximum among all roundoff errors (lower bound) +* wsp(4) = s_round, sum of roundoff errors (lower bound) +* wsp(5) = x_error, maximum among all local truncation errors +* wsp(6) = s_error, global sum of local truncation errors +* wsp(7) = tbrkdwn, if `happy breakdown', time when it occured +* wsp(8) = t_now, integration domain successfully covered +* wsp(9) = hump, i.e., max||exp(sA)||, s in [0,t] (or [t,0] if t<0) +* wsp(10) = ||w||/||v||, scaled norm of the solution w. +* -----------------------------------------------------------------| +* The `hump' is a measure of the conditioning of the problem. The +* matrix exponential is well-conditioned if hump = 1, whereas it is +* poorly-conditioned if hump >> 1. However the solution can still be +* relatively fairly accurate even when the hump is large (the hump +* is an upper bound), especially when the hump and the scaled norm +* of w [this is also computed and returned in wsp(10)] are of the +* same order of magnitude (further details in reference below). +* Markov chains are usually well-conditioned problems. +* +*----------------------------------------------------------------------| +*-----The following parameters may also be adjusted herein-------------| +* + integer mxstep, mxreject, ideg + double precision delta, gamma + parameter( mxstep = 500, + . mxreject = 0, + . ideg = 6, + . delta = 1.2d0, + . gamma = 0.9d0 ) + +* mxstep : maximum allowable number of integration steps. +* The value 0 means an infinite number of steps. +* +* mxreject: maximum allowable number of rejections at each step. +* The value 0 means an infinite number of rejections. +* +* ideg : the Pade approximation of type (ideg,ideg) is used as +* an approximation to exp(H). The value 0 switches to the +* uniform rational Chebyshev approximation of type (14,14) +* +* delta : local truncation error `safety factor' +* +* gamma : stepsize `shrinking factor' +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + integer i, j, k1, mh, mx, iv, ih, j1v, ns, ifree, lfree, iexph, + . ireject,ibrkflag,mbrkdwn, nmult, nreject, nexph, nscale, + . nstep + double precision sgn, t_out, tbrkdwn, step_min,step_max, err_loc, + . s_error, x_error, t_now, t_new, t_step, t_old, + . xm, beta, break_tol, p1, p2, p3, eps, rndoff, + . vnorm, avnorm, hj1j, hij, hump, SQR1, + . roundoff, s_round, x_round + + intrinsic AINT,ABS,DBLE,LOG10,MAX,MIN,NINT,SIGN,SQRT + double precision DDOT, DNRM2, DASUM + +*--- check restrictions on input parameters ... + iflag = 0 + if ( lwsp.lt.n*(m+2)+5*(m+2)**2+ideg+1 ) iflag = -1 + if ( liwsp.lt.m+2 ) iflag = -2 + if ( m.ge.n .or. m.le.0 ) iflag = -3 + if ( iflag.ne.0 ) stop 'bad sizes (in input of DMEXPV)' +* +*--- initialisations ... +* + k1 = 2 + mh = m + 2 + iv = 1 + ih = iv + n*(m+1) + n + ifree = ih + mh*mh + lfree = lwsp - ifree + 1 + + ibrkflag = 0 + mbrkdwn = m + nmult = 0 + nreject = 0 + nexph = 0 + nscale = 0 + + sgn = SIGN( 1.0d0,t ) + t_out = ABS( t ) + tbrkdwn = 0.0d0 + step_min = t_out + step_max = 0.0d0 + nstep = 0 + s_error = 0.0d0 + s_round = 0.0d0 + x_error = 0.0d0 + x_round = 0.0d0 + t_now = 0.0d0 + t_new = 0.0d0 + + p1 = 4.0d0/3.0d0 + 1 p2 = p1 - 1.0d0 + p3 = p2 + p2 + p2 + eps = ABS( p3-1.0d0 ) + if ( eps.eq.0.0d0 ) go to 1 + if ( tol.le.eps ) tol = SQRT( eps ) + rndoff = eps*anorm + + break_tol = 1.0d-7 +*>>> break_tol = tol +*>>> break_tol = anorm*tol + + call DCOPY( n, v,1, w,1 ) + beta = DNRM2( n, w,1 ) + vnorm = beta + hump = beta +* +*--- obtain the very first stepsize ... +* + SQR1 = SQRT( 0.1d0 ) + xm = 1.0d0/DBLE( m ) + p1 = tol*(((m+1)/2.72D0)**(m+1))*SQRT(2.0D0*3.14D0*(m+1)) + t_new = (1.0d0/anorm)*(p1/(4.0d0*beta*anorm))**xm + p1 = 10.0d0**(NINT( LOG10( t_new )-SQR1 )-1) + t_new = AINT( t_new/p1 + 0.55d0 ) * p1 +* +*--- step-by-step integration ... +* + 100 if ( t_now.ge.t_out ) goto 500 + + nstep = nstep + 1 + t_step = MIN( t_out-t_now, t_new ) + + p1 = 1.0d0/beta + do i = 1,n + wsp(iv + i-1) = p1*w(i) + enddo + do i = 1,mh*mh + wsp(ih+i-1) = 0.0d0 + enddo +* +*--- Arnoldi loop ... +* + j1v = iv + n + do 200 j = 1,m + nmult = nmult + 1 + call mydgcoov( wsp(j1v-n), wsp(j1v) , n , nz, ia, ja, a) + do i = 1,j + hij = DDOT( n, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + call DAXPY( n, -hij, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + wsp(ih+(j-1)*mh+i-1) = hij + enddo + hj1j = DNRM2( n, wsp(j1v),1 ) +*--- if `happy breakdown' go straightforward at the end ... + if ( hj1j.le.break_tol ) then +*--- print*,'happy breakdown: mbrkdwn =',j,' h =',hj1j + k1 = 0 + ibrkflag = 1 + mbrkdwn = j + tbrkdwn = t_now + t_step = t_out-t_now + goto 300 + endif + wsp(ih+(j-1)*mh+j) = hj1j + call DSCAL( n, 1.0d0/hj1j, wsp(j1v),1 ) + j1v = j1v + n + 200 continue + nmult = nmult + 1 + call mydgcoov( wsp(j1v-n), wsp(j1v) , n , nz, ia, ja, a) + avnorm = DNRM2( n, wsp(j1v),1 ) +* +*--- set 1 for the 2-corrected scheme ... +* + 300 continue + wsp(ih+m*mh+m+1) = 1.0d0 +* +*--- loop while ireject>>> iexph : (output) number such that wsp(iexph) points to exp(tH) +* i.e., exp(tH) is located at wsp(iexph ... iexph+m*m-1) +* ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ +* NOTE: if the routine was called with wsp(iptr), +* then exp(tH) will start at wsp(iptr+iexph-1). +* +* ns : (output) number of scaling-squaring used. +* +* iflag : (output) exit flag. +* 0 - no problem +* <0 - problem +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + integer mm,i,j,k,ih2,ip,iq,iused,ifree,iodd,icoef,iput,iget + double precision hnorm,scale,scale2,cp,cq + + intrinsic INT,ABS,DBLE,LOG,MAX + +*--- check restrictions on input parameters ... + mm = m*m + iflag = 0 + if ( ldh.lt.m ) iflag = -1 + if ( lwsp.lt.4*mm+ideg+1 ) iflag = -2 + if ( iflag.ne.0 ) stop 'bad sizes (in input of DSPADM)' +* +*--- initialise pointers ... +* + icoef = 1 + ih2 = icoef + (ideg+1) + ip = ih2 + mm + iq = ip + mm + ifree = iq + mm +* +*--- scaling: seek ns such that ||t*H/2^ns|| < 1/2; +* and set scale = t/2^ns ... +* + do i = 1,m + wsp(i) = 0.0d0 + enddo + do j = 1,m + do i = 1,m + wsp(i) = wsp(i) + ABS( H(i,j) ) + enddo + enddo + hnorm = 0.0d0 + do i = 1,m + hnorm = MAX( hnorm,wsp(i) ) + enddo + hnorm = ABS( t*hnorm ) + if ( hnorm.eq.0.0d0 ) stop 'Error - null H in input of DSPADM.' + ns = MAX( 0,INT(LOG(hnorm)/LOG(2.0d0))+2 ) + scale = t / DBLE(2**ns) + scale2 = scale*scale +* +*--- compute Pade coefficients ... +* + i = ideg+1 + j = 2*ideg+1 + wsp(icoef) = 1.0d0 + do k = 1,ideg + wsp(icoef+k) = (wsp(icoef+k-1)*DBLE( i-k ))/DBLE( k*(j-k) ) + enddo +* +*--- H2 = scale2*H*H ... +* + call DGEMM( 'n','n',m,m,m,scale2,H,ldh,H,ldh,0.0d0,wsp(ih2),m ) +* +*--- initialize p (numerator) and q (denominator) ... +* + cp = wsp(icoef+ideg-1) + cq = wsp(icoef+ideg) + do j = 1,m + do i = 1,m + wsp(ip + (j-1)*m + i-1) = 0.0d0 + wsp(iq + (j-1)*m + i-1) = 0.0d0 + enddo + wsp(ip + (j-1)*(m+1)) = cp + wsp(iq + (j-1)*(m+1)) = cq + enddo +* +*--- Apply Horner rule ... +* + iodd = 1 + k = ideg - 1 + 100 continue + iused = iodd*iq + (1-iodd)*ip + call DGEMM( 'n','n',m,m,m, 1.0d0,wsp(iused),m, + . wsp(ih2),m, 0.0d0,wsp(ifree),m ) + do j = 1,m + wsp(ifree+(j-1)*(m+1)) = wsp(ifree+(j-1)*(m+1))+wsp(icoef+k-1) + enddo + ip = (1-iodd)*ifree + iodd*ip + iq = iodd*ifree + (1-iodd)*iq + ifree = iused + iodd = 1-iodd + k = k-1 + if ( k.gt.0 ) goto 100 +* +*--- Obtain (+/-)(I + 2*(p\q)) ... +* + if ( iodd .eq. 1 ) then + call DGEMM( 'n','n',m,m,m, scale,wsp(iq),m, + . H,ldh, 0.0d0,wsp(ifree),m ) + iq = ifree + else + call DGEMM( 'n','n',m,m,m, scale,wsp(ip),m, + . H,ldh, 0.0d0,wsp(ifree),m ) + ip = ifree + endif + call DAXPY( mm, -1.0d0,wsp(ip),1, wsp(iq),1 ) + call DSYSV( 'U',m,m,wsp(iq),m,ipiv,wsp(ip),m,wsp(ih2),mm,iflag ) + if ( iflag.ne.0 ) stop 'Problem in DSYSV (within DSPADM)' + call DSCAL( mm, 2.0d0, wsp(ip), 1 ) + do j = 1,m + wsp(ip+(j-1)*(m+1)) = wsp(ip+(j-1)*(m+1)) + 1.0d0 + enddo + iput = ip + if ( ns.eq.0 .and. iodd.eq.1 ) then + call DSCAL( mm, -1.0d0, wsp(ip), 1 ) + goto 200 + endif +* +*-- squaring : exp(t*H) = (exp(t*H))^(2^ns) ... +* + iodd = 1 + do k = 1,ns + iget = iodd*ip + (1-iodd)*iq + iput = (1-iodd)*ip + iodd*iq + call DGEMM( 'n','n',m,m,m, 1.0d0,wsp(iget),m, wsp(iget),m, + . 0.0d0,wsp(iput),m ) + iodd = 1-iodd + enddo + 200 continue + iexph = iput + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine ZGPADM(ideg,m,t,H,ldh,wsp,lwsp,ipiv,iexph,ns,iflag) + + implicit none + double precision t + integer ideg, m, ldh, lwsp, iexph, ns, iflag, ipiv(m) + complex*16 H(ldh,m), wsp(lwsp) + +*-----Purpose----------------------------------------------------------| +* +* Computes exp(t*H), the matrix exponential of a general complex +* matrix in full, using the irreducible rational Pade approximation +* to the exponential exp(z) = r(z) = (+/-)( I + 2*(q(z)/p(z)) ), +* combined with scaling-and-squaring. +* +*-----Arguments--------------------------------------------------------| +* +* ideg : (input) the degre of the diagonal Pade to be used. +* a value of 6 is generally satisfactory. +* +* m : (input) order of H. +* +* H(ldh,m) : (input) argument matrix. +* +* t : (input) time-scale (can be < 0). +* +* wsp(lwsp) : (workspace/output) lwsp .ge. 4*m*m+ideg+1. +* +* ipiv(m) : (workspace) +* +*>>>> iexph : (output) number such that wsp(iexph) points to exp(tH) +* i.e., exp(tH) is located at wsp(iexph ... iexph+m*m-1) +* ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ +* NOTE: if the routine was called with wsp(iptr), +* then exp(tH) will start at wsp(iptr+iexph-1). +* +* ns : (output) number of scaling-squaring used. +* +* iflag : (output) exit flag. +* 0 - no problem +* <0 - problem +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + integer i,j,k,icoef,mm,ih2,iodd,iused,ifree,iq,ip,iput,iget + double precision hnorm + complex*16 cp, cq, scale, scale2, ZERO, ONE + + parameter( ZERO=(0.0d0,0.0d0), ONE=(1.0d0,0.0d0) ) + intrinsic ABS, CMPLX, DBLE, INT, LOG, MAX + +*--- check restrictions on input parameters ... + mm = m*m + iflag = 0 + if ( ldh.lt.m ) iflag = -1 + if ( lwsp.lt.4*mm+ideg+1 ) iflag = -2 + if ( iflag.ne.0 ) stop 'bad sizes (in input of ZGPADM)' +* +*--- initialise pointers ... +* + icoef = 1 + ih2 = icoef + (ideg+1) + ip = ih2 + mm + iq = ip + mm + ifree = iq + mm +* +*--- scaling: seek ns such that ||t*H/2^ns|| < 1/2; +* and set scale = t/2^ns ... +* + do i = 1,m + wsp(i) = ZERO + enddo + do j = 1,m + do i = 1,m + wsp(i) = wsp(i) + ABS( H(i,j) ) + enddo + enddo + hnorm = 0.0d0 + do i = 1,m + hnorm = MAX( hnorm,DBLE(wsp(i)) ) + enddo + hnorm = ABS( t*hnorm ) + if ( hnorm.eq.0.0d0 ) stop 'Error - null H in input of ZGPADM.' + ns = MAX( 0,INT(LOG(hnorm)/LOG(2.0d0))+2 ) + scale = CMPLX( t/DBLE(2**ns),0.0d0 ) + scale2 = scale*scale +* +*--- compute Pade coefficients ... +* + i = ideg+1 + j = 2*ideg+1 + wsp(icoef) = ONE + do k = 1,ideg + wsp(icoef+k) = (wsp(icoef+k-1)*DBLE( i-k ))/DBLE( k*(j-k) ) + enddo +* +*--- H2 = scale2*H*H ... +* + call ZGEMM( 'n','n',m,m,m,scale2,H,ldh,H,ldh,ZERO,wsp(ih2),m ) +* +*--- initialise p (numerator) and q (denominator) ... +* + cp = wsp(icoef+ideg-1) + cq = wsp(icoef+ideg) + do j = 1,m + do i = 1,m + wsp(ip + (j-1)*m + i-1) = ZERO + wsp(iq + (j-1)*m + i-1) = ZERO + enddo + wsp(ip + (j-1)*(m+1)) = cp + wsp(iq + (j-1)*(m+1)) = cq + enddo +* +*--- Apply Horner rule ... +* + iodd = 1 + k = ideg - 1 + 100 continue + iused = iodd*iq + (1-iodd)*ip + call ZGEMM( 'n','n',m,m,m, ONE,wsp(iused),m, + . wsp(ih2),m, ZERO,wsp(ifree),m ) + do j = 1,m + wsp(ifree+(j-1)*(m+1)) = wsp(ifree+(j-1)*(m+1))+wsp(icoef+k-1) + enddo + ip = (1-iodd)*ifree + iodd*ip + iq = iodd*ifree + (1-iodd)*iq + ifree = iused + iodd = 1-iodd + k = k-1 + if ( k.gt.0 ) goto 100 +* +*--- Obtain (+/-)(I + 2*(p\q)) ... +* + if ( iodd.ne.0 ) then + call ZGEMM( 'n','n',m,m,m, scale,wsp(iq),m, + . H,ldh, ZERO,wsp(ifree),m ) + iq = ifree + else + call ZGEMM( 'n','n',m,m,m, scale,wsp(ip),m, + . H,ldh, ZERO,wsp(ifree),m ) + ip = ifree + endif + call ZAXPY( mm, -ONE,wsp(ip),1, wsp(iq),1 ) + call ZGESV( m,m, wsp(iq),m, ipiv, wsp(ip),m, iflag ) + if ( iflag.ne.0 ) stop 'Problem in ZGESV (within ZGPADM)' + call ZDSCAL( mm, 2.0d0, wsp(ip), 1 ) + do j = 1,m + wsp(ip+(j-1)*(m+1)) = wsp(ip+(j-1)*(m+1)) + ONE + enddo + iput = ip + if ( ns.eq.0 .and. iodd.ne.0 ) then + call ZDSCAL( mm, -1.0d0, wsp(ip), 1 ) + goto 200 + endif +* +*-- squaring : exp(t*H) = (exp(t*H))^(2^ns) ... +* + iodd = 1 + do k = 1,ns + iget = iodd*ip + (1-iodd)*iq + iput = (1-iodd)*ip + iodd*iq + call ZGEMM( 'n','n',m,m,m, ONE,wsp(iget),m, wsp(iget),m, + . ZERO,wsp(iput),m ) + iodd = 1-iodd + enddo + 200 continue + iexph = iput + END +*----------------------------------------------------------------------| + subroutine ZHPADM(ideg,m,t,H,ldh,wsp,lwsp,ipiv,iexph,ns,iflag) + + implicit none + double precision t + integer ideg, m, ldh, lwsp, iexph, ns, iflag, ipiv(m) + complex*16 H(ldh,m), wsp(lwsp) + +*-----Purpose----------------------------------------------------------| +* +* Computes exp(t*H), the matrix exponential of an Hermitian matrix +* in full, using the irreducible rational Pade approximation to the +* exponential function exp(z) = r(z) = (+/-)( I + 2*(q(z)/p(z)) ), +* combined with scaling-and-squaring. +* +*-----Arguments--------------------------------------------------------| +* +* ideg : (input) the degre of the diagonal Pade to be used. +* a value of 6 is generally satisfactory. +* +* m : (input) order of H. +* +* H(ldh,m) : (input) argument matrix (both lower and upper parts). +* +* t : (input) time-scale (can be < 0). +* +* wsp(lwsp) : (workspace/output) lwsp .ge. 4*m*m+ideg+1. +* +* ipiv(m) : (workspace) +* +*>>>> iexph : (output) number such that wsp(iexph) points to exp(tH) +* i.e., exp(tH) is located at wsp(iexph ... iexph+m*m-1) +* ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ +* NOTE: if the routine was called with wsp(iptr), +* then exp(tH) will start at wsp(iptr+iexph-1). +* +* ns : (output) number of scaling-squaring used. +* +* iflag : (output) exit flag. +* 0 - no problem +* <0 - problem +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + integer i,j,k,icoef,mm,ih2,iodd,iused,ifree,iq,ip,iput,iget + double precision hnorm + complex*16 cp, cq, scale, scale2, ZERO, ONE + + parameter( ZERO=(0.0d0,0.0d0), ONE=(1.0d0,0.0d0) ) + intrinsic ABS, CMPLX, DBLE, INT, LOG, MAX + +*--- check restrictions on input parameters ... + mm = m*m + iflag = 0 + if ( ldh.lt.m ) iflag = -1 + if ( lwsp.lt.4*mm+ideg+1 ) iflag = -2 + if ( iflag.ne.0 ) stop 'bad sizes (in input of ZHPADM)' +* +*--- initialise pointers ... +* + icoef = 1 + ih2 = icoef + (ideg+1) + ip = ih2 + mm + iq = ip + mm + ifree = iq + mm +* +*--- scaling: seek ns such that ||t*H/2^ns|| < 1/2; +* and set scale = t/2^ns ... +* + do i = 1,m + wsp(i) = ZERO + enddo + do j = 1,m + do i = 1,m + wsp(i) = wsp(i) + ABS( H(i,j) ) + enddo + enddo + hnorm = 0.0d0 + do i = 1,m + hnorm = MAX( hnorm,DBLE(wsp(i)) ) + enddo + hnorm = ABS( t*hnorm ) + if ( hnorm.eq.0.0d0 ) stop 'Error - null H in input of ZHPADM.' + ns = MAX( 0,INT(LOG(hnorm)/LOG(2.0d0))+2 ) + scale = CMPLX( t/DBLE(2**ns),0.0d0 ) + scale2 = scale*scale +* +*--- compute Pade coefficients ... +* + i = ideg+1 + j = 2*ideg+1 + wsp(icoef) = ONE + do k = 1,ideg + wsp(icoef+k) = (wsp(icoef+k-1)*DBLE( i-k ))/DBLE( k*(j-k) ) + enddo +* +*--- H2 = scale2*H*H ... +* + call ZGEMM( 'n','n',m,m,m,scale2,H,ldh,H,ldh,ZERO,wsp(ih2),m ) +* +*--- initialise p (numerator) and q (denominator) ... +* + cp = wsp(icoef+ideg-1) + cq = wsp(icoef+ideg) + do j = 1,m + do i = 1,m + wsp(ip + (j-1)*m + i-1) = ZERO + wsp(iq + (j-1)*m + i-1) = ZERO + enddo + wsp(ip + (j-1)*(m+1)) = cp + wsp(iq + (j-1)*(m+1)) = cq + enddo +* +*--- Apply Horner rule ... +* + iodd = 1 + k = ideg - 1 + 100 continue + iused = iodd*iq + (1-iodd)*ip + call ZGEMM( 'n','n',m,m,m, ONE,wsp(iused),m, + . wsp(ih2),m, ZERO,wsp(ifree),m ) + do j = 1,m + wsp(ifree+(j-1)*(m+1)) = wsp(ifree+(j-1)*(m+1))+wsp(icoef+k-1) + enddo + ip = (1-iodd)*ifree + iodd*ip + iq = iodd*ifree + (1-iodd)*iq + ifree = iused + iodd = 1-iodd + k = k-1 + if ( k.gt.0 ) goto 100 +* +*--- Obtain (+/-)(I + 2*(p\q)) ... +* + if ( iodd.ne.0 ) then + call ZGEMM( 'n','n',m,m,m, scale,wsp(iq),m, + . H,ldh, ZERO,wsp(ifree),m ) + iq = ifree + else + call ZGEMM( 'n','n',m,m,m, scale,wsp(ip),m, + . H,ldh, ZERO,wsp(ifree),m ) + ip = ifree + endif + call ZAXPY( mm, -ONE,wsp(ip),1, wsp(iq),1 ) + call ZHESV( 'U',m,m,wsp(iq),m,ipiv,wsp(ip),m,wsp(ih2),mm,iflag ) + if ( iflag.ne.0 ) stop 'Problem in ZHESV (within ZHPADM)' + call ZDSCAL( mm, 2.0d0, wsp(ip), 1 ) + do j = 1,m + wsp(ip+(j-1)*(m+1)) = wsp(ip+(j-1)*(m+1)) + ONE + enddo + iput = ip + if ( ns.eq.0 .and. iodd.ne.0 ) then + call ZDSCAL( mm, -1.0d0, wsp(ip), 1 ) + goto 200 + endif +* +*-- squaring : exp(t*H) = (exp(t*H))^(2^ns) ... +* + iodd = 1 + do k = 1,ns + iget = iodd*ip + (1-iodd)*iq + iput = (1-iodd)*ip + iodd*iq + call ZGEMM( 'n','n',m,m,m, ONE,wsp(iget),m, wsp(iget),m, + . ZERO,wsp(iput),m ) + iodd = 1-iodd + enddo + 200 continue + iexph = iput + END +*----------------------------------------------------------------------| + subroutine DGCHBV( m, t, H,ldh, y, wsp, iwsp, iflag ) + + implicit none + integer m, ldh, iflag, iwsp(m) + double precision t, H(ldh,m), y(m) + complex*16 wsp(m*(m+2)) + +*-----Purpose----------------------------------------------------------| +* +*--- DGCHBV computes y = exp(t*H)*y using the partial fraction +* expansion of the uniform rational Chebyshev approximation +* to exp(-x) of type (14,14). H is a General matrix. +* About 14-digit accuracy is expected if the matrix H is negative +* definite. The algorithm may behave poorly otherwise. +* +*-----Arguments--------------------------------------------------------| +* +* m : (input) order of the matrix H +* +* t : (input) time-scaling factor (can be < 0). +* +* H(ldh,m): (input) argument matrix. +* +* y(m) : (input/output) on input the operand vector, +* on output the resulting vector exp(t*H)*y. +* +* iwsp(m) : (workspace) +* +* wsp : (workspace). Observe that a double precision vector of +* length 2*m*(m+2) can be used as well when calling this +* routine (thus avoiding an idle complex array elsewhere) +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + integer ndeg, i, j, ip, ih, iy, iz + parameter ( ndeg=7 ) + double precision alpha0 + complex*16 alpha(ndeg), theta(ndeg) + + intrinsic DBLE + +*--- Pointers ... + + ih = 1 + iy = ih + m*m + iz = iy + m + +*--- Coefficients and poles of the partial fraction expansion ... + + alpha0 = 0.183216998528140087D-11 + alpha(1)=( 0.557503973136501826D+02,-0.204295038779771857D+03) + alpha(2)=(-0.938666838877006739D+02, 0.912874896775456363D+02) + alpha(3)=( 0.469965415550370835D+02,-0.116167609985818103D+02) + alpha(4)=(-0.961424200626061065D+01,-0.264195613880262669D+01) + alpha(5)=( 0.752722063978321642D+00, 0.670367365566377770D+00) + alpha(6)=(-0.188781253158648576D-01,-0.343696176445802414D-01) + alpha(7)=( 0.143086431411801849D-03, 0.287221133228814096D-03) + + theta(1)=(-0.562314417475317895D+01, 0.119406921611247440D+01) + theta(2)=(-0.508934679728216110D+01, 0.358882439228376881D+01) + theta(3)=(-0.399337136365302569D+01, 0.600483209099604664D+01) + theta(4)=(-0.226978543095856366D+01, 0.846173881758693369D+01) + theta(5)=( 0.208756929753827868D+00, 0.109912615662209418D+02) + theta(6)=( 0.370327340957595652D+01, 0.136563731924991884D+02) + theta(7)=( 0.889777151877331107D+01, 0.166309842834712071D+02) +* +*--- Accumulation of the contribution of each pole ... +* + do j = 1,m + wsp(iz+j-1) = y(j) + y(j) = y(j)*alpha0 + enddo + do ip = 1,ndeg +*--- Solve each fraction using Gaussian elimination with pivoting... + do j = 1,m + do i = 1,m + wsp(ih+(j-1)*m+i-1) = -t*H(i,j) + enddo + wsp(ih+(j-1)*m+j-1) = wsp(ih+(j-1)*m+j-1)-theta(ip) + wsp(iy+j-1) = wsp(iz+j-1) + enddo + call ZGESV( M, 1, WSP(iH),M, IWSP, WSP(iY),M, IFLAG ) + if ( IFLAG.ne.0 ) stop 'Error in DGCHBV' +*--- Accumulate the partial result in y ... + do j = 1,m + y(j) = y(j) + DBLE( alpha(ip)*wsp(iy+j-1) ) + enddo + enddo + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine DSCHBV( m, t, H,ldh, y, wsp, iwsp, iflag ) + + implicit none + integer m, ldh, iflag, iwsp(m) + double precision t, H(ldh,m), y(m) + complex*16 wsp(m*(m+2)) + +*-----Purpose----------------------------------------------------------| +* +*--- DSCHBV computes y = exp(t*H)*y using the partial fraction +* expansion of the uniform rational Chebyshev approximation +* to exp(-x) of type (14,14). H is assumed to be symmetric. +* About 14-digit accuracy is expected if the matrix H is negative +* definite. The algorithm may behave poorly otherwise. +* +*-----Arguments--------------------------------------------------------| +* +* m : (input) order of matrix H +* +* t : (input) time-scaling factor (can be < 0). +* +* H(ldh,m): (input) symmetric matrix. +* +* y(m) : (input/output) on input the operand vector, +* on output the resulting vector exp(t*H)*y. +* +* iwsp(m) : (workspace) +* +* wsp : (workspace). Observe that a double precision vector of +* length 2*m*(m+2) can be used as well when calling this +* routine (thus avoiding an idle complex array elsewhere) +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + integer ndeg, i, j, ip, ih, iy, iz + parameter ( ndeg=7 ) + double precision alpha0 + complex*16 alpha(ndeg), theta(ndeg), w + + intrinsic ABS,CMPLX,DBLE,MIN + +*--- Pointers ... + + ih = 1 + iy = ih + m*m + iz = iy + m + +*--- Coefficients and poles of the partial fraction expansion ... + + alpha0 = 0.183216998528140087D-11 + alpha(1)=( 0.557503973136501826D+02,-0.204295038779771857D+03) + alpha(2)=(-0.938666838877006739D+02, 0.912874896775456363D+02) + alpha(3)=( 0.469965415550370835D+02,-0.116167609985818103D+02) + alpha(4)=(-0.961424200626061065D+01,-0.264195613880262669D+01) + alpha(5)=( 0.752722063978321642D+00, 0.670367365566377770D+00) + alpha(6)=(-0.188781253158648576D-01,-0.343696176445802414D-01) + alpha(7)=( 0.143086431411801849D-03, 0.287221133228814096D-03) + + theta(1)=(-0.562314417475317895D+01, 0.119406921611247440D+01) + theta(2)=(-0.508934679728216110D+01, 0.358882439228376881D+01) + theta(3)=(-0.399337136365302569D+01, 0.600483209099604664D+01) + theta(4)=(-0.226978543095856366D+01, 0.846173881758693369D+01) + theta(5)=( 0.208756929753827868D+00, 0.109912615662209418D+02) + theta(6)=( 0.370327340957595652D+01, 0.136563731924991884D+02) + theta(7)=( 0.889777151877331107D+01, 0.166309842834712071D+02) +* +*--- Accumulation of the contribution of each pole ... +* + do j = 1,m + wsp(iz+j-1) = y(j) + y(j) = y(j)*alpha0 + enddo + do ip = 1,ndeg +*--- Solve each fraction using Gaussian elimination with pivoting... + do j = 1,m + do i = 1,m + wsp(ih+(j-1)*m+i-1) = -t*H(i,j) + enddo + wsp(ih+(j-1)*m+j-1) = wsp(ih+(j-1)*m+j-1)-theta(ip) + wsp(iy+j-1) = wsp(iz+j-1) + enddo + call ZSYSV('U', M, 1, WSP(iH),M, IWSP, WSP(iY),M, W,1, IFLAG ) + if ( IFLAG.ne.0 ) stop 'Error in DSCHBV' +*--- Accumulate the partial result in y ... + do i = 1,m + y(i) = y(i) + DBLE( alpha(ip)*wsp(iy+i-1) ) + enddo + enddo + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine ZGCHBV( m, t, H,ldh, y, wsp, iwsp, iflag ) + + implicit none + integer m, ldh, iflag, iwsp(m) + double precision t + complex*16 H(ldh,m), y(m), wsp(m*(m+2)) + +*-----Purpose----------------------------------------------------------| +* +*--- ZGCHBV computes y = exp(t*H)*y using the partial fraction +* expansion of the uniform rational Chebyshev approximation +* to exp(-x) of type (14,14). H is a General matrix. +* About 14-digit accuracy is expected if the matrix H is negative +* definite. The algorithm may behave poorly otherwise. +* +*-----Arguments--------------------------------------------------------| +* +* m : (input) order of the matrix H. +* +* t : (input) time-scaling factor (can be < 0). +* +* H(ldh,m): (input) argument matrix. +* +* y(m) : (input/output) on input the operand vector, +* on output the resulting vector exp(t*H)*y. +* +* iwsp(m) : (workspace) +* +* wsp : (workspace). Observe that a double precision vector of +* length 2*m*(m+2) can be used as well when calling this +* routine. +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + integer ndeg, i, j, ip, ih, iy, iz + parameter ( ndeg=7 ) + double precision alpha0 + complex*16 alpha(2*ndeg), theta(2*ndeg) + +*--- Pointers ... + + ih = 1 + iy = ih + m*m + iz = iy + m + +*--- Coefficients and poles of the partial fraction expansion ... + + alpha0 = 0.183216998528140087D-11 + alpha(1)=( 0.557503973136501826D+02,-0.204295038779771857D+03) + alpha(2)=(-0.938666838877006739D+02, 0.912874896775456363D+02) + alpha(3)=( 0.469965415550370835D+02,-0.116167609985818103D+02) + alpha(4)=(-0.961424200626061065D+01,-0.264195613880262669D+01) + alpha(5)=( 0.752722063978321642D+00, 0.670367365566377770D+00) + alpha(6)=(-0.188781253158648576D-01,-0.343696176445802414D-01) + alpha(7)=( 0.143086431411801849D-03, 0.287221133228814096D-03) + + theta(1)=(-0.562314417475317895D+01, 0.119406921611247440D+01) + theta(2)=(-0.508934679728216110D+01, 0.358882439228376881D+01) + theta(3)=(-0.399337136365302569D+01, 0.600483209099604664D+01) + theta(4)=(-0.226978543095856366D+01, 0.846173881758693369D+01) + theta(5)=( 0.208756929753827868D+00, 0.109912615662209418D+02) + theta(6)=( 0.370327340957595652D+01, 0.136563731924991884D+02) + theta(7)=( 0.889777151877331107D+01, 0.166309842834712071D+02) +* + do ip = 1,ndeg + theta(ndeg+ip) = CONJG( theta(ip) ) + alpha(ndeg+ip) = CONJG( alpha(ip) ) + enddo +* +*--- Accumulation of the contribution of each pole ... +* + do j = 1,m + wsp(iz+j-1) = y(j) + y(j) = y(j)*alpha0 + enddo + do ip = 1,2*ndeg + alpha(ip) = 0.5d0*alpha(ip) +*--- Solve each fraction using Gaussian elimination with pivoting... + do j = 1,m + do i = 1,m + wsp(ih+(j-1)*m+i-1) = -t*H(i,j) + enddo + wsp(ih+(j-1)*m+j-1) = wsp(ih+(j-1)*m+j-1)-theta(ip) + wsp(iy+j-1) = wsp(iz+j-1) + enddo + call ZGESV( M, 1, WSP(iH),M, IWSP, WSP(iY),M, IFLAG ) + if ( IFLAG.ne.0 ) stop 'Error in ZGCHBV' +*--- Accumulate the partial result in y ... + do i = 1,m + y(i) = y(i) + alpha(ip)*wsp(iy+i-1) + enddo + enddo + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine DNCHBV( m, t, H,ldh, y, wsp ) + + implicit none + integer m, ldh + double precision t, H(ldh,m), y(m) + complex*16 wsp(m*(m+2)) + +*-----Purpose----------------------------------------------------------| +* +*--- DNCHBV computes y = exp(t*H)*y using the partial fraction +* expansion of the uniform rational Chebyshev approximation +* to exp(-x) of type (14,14). H is assumed to be upper-Hessenberg. +* About 14-digit accuracy is expected if the matrix H is negative +* definite. The algorithm may behave poorly otherwise. +* +*-----Arguments--------------------------------------------------------| +* +* m : (input) order of the Hessenberg matrix H +* +* t : (input) time-scaling factor (can be < 0). +* +* H(ldh,m): (input) upper Hessenberg matrix. +* +* y(m) : (input/output) on input the operand vector, +* on output the resulting vector exp(t*H)*y. +* +* wsp : (workspace). Observe that a double precision vector of +* length 2*m*(m+2) can be used as well when calling this +* routine (thus avoiding an idle complex array elsewhere) +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + complex*16 ZERO + integer ndeg, i, j, k, ip, ih, iy, iz + parameter ( ndeg=7, ZERO=(0.0d0,0.0d0) ) + double precision alpha0 + complex*16 alpha(ndeg), theta(ndeg), tmpc + + intrinsic ABS,DBLE,MIN + +*--- Pointers ... + + ih = 1 + iy = ih + m*m + iz = iy + m + +*--- Coefficients and poles of the partial fraction expansion... + + alpha0 = 0.183216998528140087D-11 + alpha(1)=( 0.557503973136501826D+02,-0.204295038779771857D+03) + alpha(2)=(-0.938666838877006739D+02, 0.912874896775456363D+02) + alpha(3)=( 0.469965415550370835D+02,-0.116167609985818103D+02) + alpha(4)=(-0.961424200626061065D+01,-0.264195613880262669D+01) + alpha(5)=( 0.752722063978321642D+00, 0.670367365566377770D+00) + alpha(6)=(-0.188781253158648576D-01,-0.343696176445802414D-01) + alpha(7)=( 0.143086431411801849D-03, 0.287221133228814096D-03) + + theta(1)=(-0.562314417475317895D+01, 0.119406921611247440D+01) + theta(2)=(-0.508934679728216110D+01, 0.358882439228376881D+01) + theta(3)=(-0.399337136365302569D+01, 0.600483209099604664D+01) + theta(4)=(-0.226978543095856366D+01, 0.846173881758693369D+01) + theta(5)=( 0.208756929753827868D+00, 0.109912615662209418D+02) + theta(6)=( 0.370327340957595652D+01, 0.136563731924991884D+02) + theta(7)=( 0.889777151877331107D+01, 0.166309842834712071D+02) +* +*--- Accumulation of the contribution of each pole ... +* + do j = 1,m + wsp(iz+j-1) = y(j) + y(j) = y(j)*alpha0 + enddo + do ip = 1,ndeg +*--- Solve each fraction using Gaussian elimination with pivoting... + do j = 1,m + wsp(iy+j-1) = wsp(iz+j-1) + do i = 1,MIN( j+1,m ) + wsp(ih+(j-1)*m+i-1) = -t*H(i,j) + enddo + wsp(ih+(j-1)*m+j-1) = wsp(ih+(j-1)*m+j-1)-theta(ip) + do k = i,m + wsp(ih+(j-1)*m+k-1) = ZERO + enddo + enddo + do i = 1,m-1 +*--- Get pivot and exchange rows ... + if (ABS(wsp(ih+(i-1)*m+i-1)).lt.ABS(wsp(ih+(i-1)*m+i))) then + call ZSWAP( m-i+1, wsp(ih+(i-1)*m+i-1),m, + . wsp(ih+(i-1)*m+i),m ) + call ZSWAP( 1, wsp(iy+i-1),1, wsp(iy+i),1 ) + endif +*--- Forward eliminiation ... + tmpc = wsp(ih+(i-1)*m+i) / wsp(ih+(i-1)*m+i-1) + call ZAXPY( m-i, -tmpc, wsp(ih+i*m+i-1),m, wsp(ih+i*m+i),m ) + wsp(iy+i) = wsp(iy+i) - tmpc*wsp(iy+i-1) + enddo +*--- Backward substitution ... + do i = m,1,-1 + tmpc = wsp(iy+i-1) + do j = i+1,m + tmpc = tmpc - wsp(ih+(j-1)*m+i-1)*wsp(iy+j-1) + enddo + wsp(iy+i-1) = tmpc / wsp(ih+(i-1)*m+i-1) + enddo +*--- Accumulate the partial result in y ... + do j = 1,m + y(j) = y(j) + DBLE( alpha(ip)*wsp(iy+j-1) ) + enddo + enddo + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine ZNCHBV( m, t, H,ldh, y, wsp ) + + implicit none + integer m, ldh + double precision t + complex*16 H(ldh,m), y(m), wsp(m*(m+2)) + +*-----Purpose----------------------------------------------------------| +* +*--- ZNCHBV computes y = exp(t*H)*y using the partial fraction +* expansion of the uniform rational Chebyshev approximation +* to exp(-x) of type (14,14). H is assumed to be upper-Hessenberg. +* About 14-digit accuracy is expected if the matrix H is negative +* definite. The algorithm may behave poorly otherwise. +* +*-----Arguments--------------------------------------------------------| +* +* m : (input) order of the Hessenberg matrix H +* +* t : (input) time-scaling factor (can be < 0). +* +* H(ldh,m): (input) upper Hessenberg matrix. +* +* y(m) : (input/output) on input the operand vector, +* on output the resulting vector exp(t*H)*y. +* +* wsp : (workspace). Observe that a double precision vector of +* length 2*m*(m+2) can be used as well when calling this +* routine. +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + complex*16 ZERO + integer ndeg, i, j, k, ip, ih, iy, iz + parameter ( ndeg=7, ZERO=(0.0d0,0.0d0) ) + double precision alpha0 + complex*16 alpha(ndeg), theta(ndeg), tmpc + + intrinsic ABS,DBLE,CONJG,MIN + +*--- Pointers ... + + ih = 1 + iy = ih + m*m + iz = iy + m + +*--- Coefficients and poles of the partial fraction expansion... + + alpha0 = 0.183216998528140087D-11 + alpha(1)=( 0.557503973136501826D+02,-0.204295038779771857D+03) + alpha(2)=(-0.938666838877006739D+02, 0.912874896775456363D+02) + alpha(3)=( 0.469965415550370835D+02,-0.116167609985818103D+02) + alpha(4)=(-0.961424200626061065D+01,-0.264195613880262669D+01) + alpha(5)=( 0.752722063978321642D+00, 0.670367365566377770D+00) + alpha(6)=(-0.188781253158648576D-01,-0.343696176445802414D-01) + alpha(7)=( 0.143086431411801849D-03, 0.287221133228814096D-03) + + theta(1)=(-0.562314417475317895D+01, 0.119406921611247440D+01) + theta(2)=(-0.508934679728216110D+01, 0.358882439228376881D+01) + theta(3)=(-0.399337136365302569D+01, 0.600483209099604664D+01) + theta(4)=(-0.226978543095856366D+01, 0.846173881758693369D+01) + theta(5)=( 0.208756929753827868D+00, 0.109912615662209418D+02) + theta(6)=( 0.370327340957595652D+01, 0.136563731924991884D+02) + theta(7)=( 0.889777151877331107D+01, 0.166309842834712071D+02) +* + do ip = 1,ndeg + theta(ndeg+ip) = CONJG( theta(ip) ) + alpha(ndeg+ip) = CONJG( alpha(ip) ) + enddo +* +*--- Accumulation of the contribution of each pole ... +* + do j = 1,m + wsp(iz+j-1) = y(j) + y(j) = y(j)*alpha0 + enddo + do ip = 1,2*ndeg + alpha(ip) = 0.5d0*alpha(ip) +*--- Solve each fraction using Gaussian elimination with pivoting... + do j = 1,m + wsp(iy+j-1) = wsp(iz+j-1) + do i = 1,MIN( j+1,m ) + wsp(ih+(j-1)*m+i-1) = -t*H(i,j) + enddo + wsp(ih+(j-1)*m+j-1) = wsp(ih+(j-1)*m+j-1)-theta(ip) + do k = i,m + wsp(ih+(j-1)*m+k-1) = ZERO + enddo + enddo + do i = 1,m-1 +*--- Get pivot and exchange rows ... + if (ABS(wsp(ih+(i-1)*m+i-1)).lt.ABS(wsp(ih+(i-1)*m+i))) then + call ZSWAP( m-i+1, wsp(ih+(i-1)*m+i-1),m, + . wsp(ih+(i-1)*m+i),m ) + call ZSWAP( 1, wsp(iy+i-1),1, wsp(iy+i),1 ) + endif +*--- Forward eliminiation ... + tmpc = wsp(ih+(i-1)*m+i) / wsp(ih+(i-1)*m+i-1) + call ZAXPY( m-i, -tmpc, wsp(ih+i*m+i-1),m, wsp(ih+i*m+i),m ) + wsp(iy+i) = wsp(iy+i) - tmpc*wsp(iy+i-1) + enddo +*--- Backward substitution ... + do i = m,1,-1 + tmpc = wsp(iy+i-1) + do j = i+1,m + tmpc = tmpc - wsp(ih+(j-1)*m+i-1)*wsp(iy+j-1) + enddo + wsp(iy+i-1) = tmpc / wsp(ih+(i-1)*m+i-1) + enddo +*--- Accumulate the partial result in y ... + do j = 1,m + y(j) = y(j) + alpha(ip)*wsp(iy+j-1) + enddo + enddo + END +*----------------------------------------------------------------------| +*----------------------------------------------------------------------| + subroutine mydgcoov ( x, y , n , nz, ia, ja, a) + implicit none + double precision x(*), y(*) +* +*--- Computes y = A*x. A is passed via a fortran `common statement'. +*--- A is assumed here to be under the COOrdinates storage format. +* + integer n, nz + integer ia(nz), ja(nz) + double precision a(nz) + integer i, j + + do j = 1,n + y(j) = 0.0d0 + enddo + do i = 1,nz + y(ia(i)) = y(ia(i)) + a(i)*x(ja(i)) + enddo + END + + subroutine myDGEXPV( n, m, t, v, w, tol, anorm, + . wsp,lwsp,iwsp,liwsp,itrace,iflag,ia,ja,a,nz ) + + implicit none + integer n,nz,m,lwsp,liwsp,itrace,iflag,iwsp(liwsp),ia(nz),ja(nz) + double precision t, tol, anorm, v(n), w(n), wsp(lwsp), a(nz) + +*-----Purpose----------------------------------------------------------| +* +*--- DGEXPV computes w = exp(t*A)*v - for a General matrix A. +* +* It does not compute the matrix exponential in isolation but +* instead, it computes directly the action of the exponential +* operator on the operand vector. This way of doing so allows +* for addressing large sparse problems. +* +* The method used is based on Krylov subspace projection +* techniques and the matrix under consideration interacts only +* via the external routine `matvec' performing the matrix-vector +* product (matrix-free method). +* +*-----Arguments--------------------------------------------------------| +* +* n : (input) order of the principal matrix A. +* +* m : (input) maximum size for the Krylov basis. +* +* t : (input) time at wich the solution is needed (can be < 0). +* +* v(n) : (input) given operand vector. +* +* w(n) : (output) computed approximation of exp(t*A)*v. +* +* tol : (input/output) the requested accuracy tolerance on w. +* If on input tol=0.0d0 or tol is too small (tol.le.eps) +* the internal value sqrt(eps) is used, and tol is set to +* sqrt(eps) on output (`eps' denotes the machine epsilon). +* (`Happy breakdown' is assumed if h(j+1,j) .le. anorm*tol) +* +* anorm : (input) an approximation of some norm of A. +* +* wsp(lwsp): (workspace) lwsp .ge. n*(m+1)+n+(m+2)^2+4*(m+2)^2+ideg+1 +* +---------+-------+---------------+ +* (actually, ideg=6) V H wsp for PADE +* +* iwsp(liwsp): (workspace) liwsp .ge. m+2 +* +* matvec : external subroutine for matrix-vector multiplication. +* synopsis: matvec( x, y ) +* double precision x(*), y(*) +* computes: y(1:n) <- A*x(1:n) +* where A is the principal matrix. +* +* itrace : (input) running mode. 0=silent, 1=print step-by-step info +* +* iflag : (output) exit flag. +* <0 - bad input arguments +* 0 - no problem +* 1 - maximum number of steps reached without convergence +* 2 - requested tolerance was too high +* +*-----Accounts on the computation--------------------------------------| +* Upon exit, an interested user may retrieve accounts on the +* computations. They are located in wsp and iwsp as indicated below: +* +* location mnemonic description +* -----------------------------------------------------------------| +* iwsp(1) = nmult, number of matrix-vector multiplications used +* iwsp(2) = nexph, number of Hessenberg matrix exponential evaluated +* iwsp(3) = nscale, number of repeated squaring involved in Pade +* iwsp(4) = nstep, number of integration steps used up to completion +* iwsp(5) = nreject, number of rejected step-sizes +* iwsp(6) = ibrkflag, set to 1 if `happy breakdown' and 0 otherwise +* iwsp(7) = mbrkdwn, if `happy brkdown', basis-size when it occured +* -----------------------------------------------------------------| +* wsp(1) = step_min, minimum step-size used during integration +* wsp(2) = step_max, maximum step-size used during integration +* wsp(3) = dummy +* wsp(4) = dummy +* wsp(5) = x_error, maximum among all local truncation errors +* wsp(6) = s_error, global sum of local truncation errors +* wsp(7) = tbrkdwn, if `happy breakdown', time when it occured +* wsp(8) = t_now, integration domain successfully covered +* wsp(9) = hump, i.e., max||exp(sA)||, s in [0,t] (or [t,0] if t<0) +* wsp(10) = ||w||/||v||, scaled norm of the solution w. +* -----------------------------------------------------------------| +* The `hump' is a measure of the conditioning of the problem. The +* matrix exponential is well-conditioned if hump = 1, whereas it is +* poorly-conditioned if hump >> 1. However the solution can still be +* relatively fairly accurate even when the hump is large (the hump +* is an upper bound), especially when the hump and the scaled norm +* of w [this is also computed and returned in wsp(10)] are of the +* same order of magnitude (further details in reference below). +* +*----------------------------------------------------------------------| +*-----The following parameters may also be adjusted herein-------------| +* + integer mxstep, mxreject, ideg + double precision delta, gamma + parameter( mxstep = 1000, + . mxreject = 0, + . ideg = 6, + . delta = 1.2d0, + . gamma = 0.9d0 ) + +* mxstep : maximum allowable number of integration steps. +* The value 0 means an infinite number of steps. +* +* mxreject: maximum allowable number of rejections at each step. +* The value 0 means an infinite number of rejections. +* +* ideg : the Pade approximation of type (ideg,ideg) is used as +* an approximation to exp(H). The value 0 switches to the +* uniform rational Chebyshev approximation of type (14,14) +* +* delta : local truncation error `safety factor' +* +* gamma : stepsize `shrinking factor' +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + integer i, j, k1, mh, mx, iv, ih, j1v, ns, ifree, lfree, iexph, + . ireject,ibrkflag,mbrkdwn, nmult, nreject, nexph, nscale, + . nstep + double precision sgn, t_out, tbrkdwn, step_min,step_max, err_loc, + . s_error, x_error, t_now, t_new, t_step, t_old, + . xm, beta, break_tol, p1, p2, p3, eps, rndoff, + . vnorm, avnorm, hj1j, hij, hump, SQR1 + + intrinsic AINT,ABS,DBLE,LOG10,MAX,MIN,NINT,SIGN,SQRT + double precision DDOT, DNRM2 + +*--- check restrictions on input parameters ... + iflag = 0 + if ( lwsp.lt.n*(m+2)+5*(m+2)**2+ideg+1 ) iflag = -1 + if ( liwsp.lt.m+2 ) iflag = -2 + if ( m.ge.n .or. m.le.0 ) iflag = -3 + if ( iflag.ne.0 ) stop 'bad sizes (in input of DGEXPV)' +* +*--- initialisations ... +* + k1 = 2 + mh = m + 2 + iv = 1 + ih = iv + n*(m+1) + n + ifree = ih + mh*mh + lfree = lwsp - ifree + 1 + + ibrkflag = 0 + mbrkdwn = m + nmult = 0 + nreject = 0 + nexph = 0 + nscale = 0 + + t_out = ABS( t ) + tbrkdwn = 0.0d0 + step_min = t_out + step_max = 0.0d0 + nstep = 0 + s_error = 0.0d0 + x_error = 0.0d0 + t_now = 0.0d0 + t_new = 0.0d0 + + p1 = 4.0d0/3.0d0 + 1 p2 = p1 - 1.0d0 + p3 = p2 + p2 + p2 + eps = ABS( p3-1.0d0 ) + if ( eps.eq.0.0d0 ) go to 1 + if ( tol.le.eps ) tol = SQRT( eps ) + rndoff = eps*anorm + + break_tol = 1.0d-7 +*>>> break_tol = tol +*>>> break_tol = anorm*tol + + sgn = SIGN( 1.0d0,t ) + call DCOPY( n, v,1, w,1 ) + beta = DNRM2( n, w,1 ) + vnorm = beta + hump = beta +* +*--- obtain the very first stepsize ... +* + SQR1 = SQRT( 0.1d0 ) + xm = 1.0d0/DBLE( m ) + p1 = tol*(((m+1)/2.72D0)**(m+1))*SQRT(2.0D0*3.14D0*(m+1)) + t_new = (1.0d0/anorm)*(p1/(4.0d0*beta*anorm))**xm + p1 = 10.0d0**(NINT( LOG10( t_new )-SQR1 )-1) + t_new = AINT( t_new/p1 + 0.55d0 ) * p1 +* +*--- step-by-step integration ... +* + 100 if ( t_now.ge.t_out ) goto 500 + + nstep = nstep + 1 + t_step = MIN( t_out-t_now, t_new ) + + p1 = 1.0d0/beta + do i = 1,n + wsp(iv + i-1) = p1*w(i) + enddo + do i = 1,mh*mh + wsp(ih+i-1) = 0.0d0 + enddo +* +*--- Arnoldi loop ... +* + j1v = iv + n + do 200 j = 1,m + nmult = nmult + 1 + call mydgcoov( wsp(j1v-n), wsp(j1v), n , nz, ia, ja, a) + do i = 1,j + hij = DDOT( n, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + call DAXPY( n, -hij, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + wsp(ih+(j-1)*mh+i-1) = hij + enddo + hj1j = DNRM2( n, wsp(j1v),1 ) +*--- if `happy breakdown' go straightforward at the end ... + if ( hj1j.le.break_tol ) then + print*,'happy breakdown: mbrkdwn =',j,' h =',hj1j + k1 = 0 + ibrkflag = 1 + mbrkdwn = j + tbrkdwn = t_now + t_step = t_out-t_now + goto 300 + endif + wsp(ih+(j-1)*mh+j) = hj1j + call DSCAL( n, 1.0d0/hj1j, wsp(j1v),1 ) + j1v = j1v + n + 200 continue + nmult = nmult + 1 + call mydgcoov( wsp(j1v-n), wsp(j1v), n , nz, ia, ja, a ) + avnorm = DNRM2( n, wsp(j1v),1 ) +* +*--- set 1 for the 2-corrected scheme ... +* + 300 continue + wsp(ih+m*mh+m+1) = 1.0d0 +* +*--- loop while ireject> 1. However the solution can still be +* relatively fairly accurate even when the hump is large (the hump +* is an upper bound), especially when the hump and the scaled norm +* of w [this is also computed and returned in wsp(10)] are of the +* same order of magnitude (further details in reference below). +* +*----------------------------------------------------------------------| +*-----The following parameters may also be adjusted herein-------------| +* + integer mxstep, mxreject, ideg + double precision delta, gamma + parameter( mxstep = 500, + . mxreject = 0, + . ideg = 6, + . delta = 1.2d0, + . gamma = 0.9d0 ) + +* mxstep : maximum allowable number of integration steps. +* The value 0 means an infinite number of steps. +* +* mxreject: maximum allowable number of rejections at each step. +* The value 0 means an infinite number of rejections. +* +* ideg : the Pade approximation of type (ideg,ideg) is used as +* an approximation to exp(H). The value 0 switches to the +* uniform rational Chebyshev approximation of type (14,14) +* +* delta : local truncation error `safety factor' +* +* gamma : stepsize `shrinking factor' +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + integer i, j, k1, mh, mx, iv, ih, j1v, ns, ifree, lfree, iexph, + . ireject,ibrkflag,mbrkdwn, nmult, nreject, nexph, nscale, + . nstep + double precision sgn, t_out, tbrkdwn, step_min,step_max, err_loc, + . s_error, x_error, t_now, t_new, t_step, t_old, + . xm, beta, break_tol, p1, p2, p3, eps, rndoff, + . vnorm, avnorm, hj1j, hjj, hump, SQR1 + + intrinsic AINT,ABS,DBLE,LOG10,MAX,MIN,NINT,SIGN,SQRT + double precision DDOT, DNRM2 + +*--- check restrictions on input parameters ... + iflag = 0 + if ( lwsp.lt.n*(m+2)+5*(m+2)**2+ideg+1 ) iflag = -1 + if ( liwsp.lt.m+2 ) iflag = -2 + if ( m.ge.n .or. m.le.0 ) iflag = -3 + if ( iflag.ne.0 ) stop 'bad sizes (in input of DSEXPV)' +* +*--- initialisations ... +* + k1 = 2 + mh = m + 2 + iv = 1 + ih = iv + n*(m+1) + n + ifree = ih + mh*mh + lfree = lwsp - ifree + 1 + + ibrkflag = 0 + mbrkdwn = m + nmult = 0 + nreject = 0 + nexph = 0 + nscale = 0 + + t_out = ABS( t ) + tbrkdwn = 0.0d0 + step_min = t_out + step_max = 0.0d0 + nstep = 0 + s_error = 0.0d0 + x_error = 0.0d0 + t_now = 0.0d0 + t_new = 0.0d0 + + p1 = 4.0d0/3.0d0 + 1 p2 = p1 - 1.0d0 + p3 = p2 + p2 + p2 + eps = ABS( p3-1.0d0 ) + if ( eps.eq.0.0d0 ) go to 1 + if ( tol.le.eps ) tol = SQRT( eps ) + rndoff = eps*anorm + + break_tol = 1.0d-7 +*>>> break_tol = tol +*>>> break_tol = anorm*tol + + sgn = SIGN( 1.0d0,t ) + call DCOPY( n, v,1, w,1 ) + beta = DNRM2( n, w,1 ) + vnorm = beta + hump = beta +* +*--- obtain the very first stepsize ... +* + SQR1 = SQRT( 0.1d0 ) + xm = 1.0d0/DBLE( m ) + p1 = tol*(((m+1)/2.72D0)**(m+1))*SQRT(2.0D0*3.14D0*(m+1)) + t_new = (1.0d0/anorm)*(p1/(4.0d0*beta*anorm))**xm + p1 = 10.0d0**(NINT( LOG10( t_new )-SQR1 )-1) + t_new = AINT( t_new/p1 + 0.55d0 ) * p1 +* +*--- step-by-step integration ... +* + 100 if ( t_now.ge.t_out ) goto 500 + + nstep = nstep + 1 + t_step = MIN( t_out-t_now, t_new ) + + p1 = 1.0d0/beta + do i = 1,n + wsp(iv + i-1) = p1*w(i) + enddo + do i = 1,mh*mh + wsp(ih+i-1) = 0.0d0 + enddo +* +*--- Lanczos loop ... +* + j1v = iv + n + do 200 j = 1,m + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + if ( j.gt.1 ) + . call DAXPY(n,-wsp(ih+(j-1)*mh+j-2),wsp(j1v-2*n),1,wsp(j1v),1) + hjj = DDOT( n, wsp(j1v-n),1, wsp(j1v),1 ) + call DAXPY( n, -hjj, wsp(j1v-n),1, wsp(j1v),1 ) + hj1j = DNRM2( n, wsp(j1v),1 ) + wsp(ih+(j-1)*(mh+1)) = hjj +*--- if `happy breakdown' go straightforward at the end ... + if ( hj1j.le.break_tol ) then + print*,'happy breakdown: mbrkdwn =',j,' h =',hj1j + k1 = 0 + ibrkflag = 1 + mbrkdwn = j + tbrkdwn = t_now + t_step = t_out-t_now + goto 300 + endif + wsp(ih+(j-1)*mh+j) = hj1j + wsp(ih+j*mh+j-1) = hj1j + call DSCAL( n, 1.0d0/hj1j, wsp(j1v),1 ) + j1v = j1v + n + 200 continue + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + avnorm = DNRM2( n, wsp(j1v),1 ) +* +*--- set 1 for the 2-corrected scheme ... +* + 300 continue + wsp(ih+m*mh+m-1) = 0.0d0 + wsp(ih+m*mh+m+1) = 1.0d0 +* +*--- loop while ireject> 1. However the solution can still be +* relatively fairly accurate even when the hump is large (the hump +* is an upper bound), especially when the hump and the scaled norm +* of w [this is also computed and returned in wsp(10)] are of the +* same order of magnitude (further details in reference below). +* +*----------------------------------------------------------------------| +*-----The following parameters may also be adjusted herein-------------| +* + integer mxstep, mxreject, ideg + double precision delta, gamma + parameter( mxstep = 500, + . mxreject = 0, + . ideg = 6, + . delta = 1.2d0, + . gamma = 0.9d0 ) + +* mxstep : maximum allowable number of integration steps. +* The value 0 means an infinite number of steps. +* +* mxreject: maximum allowable number of rejections at each step. +* The value 0 means an infinite number of rejections. +* +* ideg : the Pade approximation of type (ideg,ideg) is used as +* an approximation to exp(H). The value 0 switches to the +* uniform rational Chebyshev approximation of type (14,14) +* +* delta : local truncation error `safety factor' +* +* gamma : stepsize `shrinking factor' +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| + + complex*16 ZERO, ONE + parameter( ZERO=(0.0d0,0.0d0), ONE=(1.0d0,0.0d0) ) + integer i, j, k1, mh, mx, iv, ih, j1v, ns, ifree, lfree, iexph, + . ireject,ibrkflag,mbrkdwn, nmult, nreject, nexph, nscale, + . nstep + double precision sgn, t_out, tbrkdwn, step_min,step_max, err_loc, + . s_error, x_error, t_now, t_new, t_step, t_old, + . xm, beta, break_tol, p1, p2, p3, eps, rndoff, + . vnorm, avnorm, hj1j, hump, SQR1 + complex*16 hij + + intrinsic AINT,ABS,CMPLX,DBLE,INT,LOG10,MAX,MIN,NINT,SIGN,SQRT + complex*16 ZDOTC + double precision DZNRM2 +* +*--- check restrictions on input parameters ... +* + iflag = 0 + if ( lwsp.lt.n*(m+2)+5*(m+2)**2+ideg+1 ) iflag = -1 + if ( liwsp.lt.m+2 ) iflag = -2 + if ( m.ge.n .or. m.le.0 ) iflag = -3 + if ( iflag.ne.0 ) stop 'bad sizes (in input of ZGEXPV)' +* +*--- initialisations ... +* + k1 = 2 + mh = m + 2 + iv = 1 + ih = iv + n*(m+1) + n + ifree = ih + mh*mh + lfree = lwsp - ifree + 1 + + ibrkflag = 0 + mbrkdwn = m + nmult = 0 + nreject = 0 + nexph = 0 + nscale = 0 + + t_out = ABS( t ) + tbrkdwn = 0.0d0 + step_min = t_out + step_max = 0.0d0 + nstep = 0 + s_error = 0.0d0 + x_error = 0.0d0 + t_now = 0.0d0 + t_new = 0.0d0 + + p1 = 4.0d0/3.0d0 + 1 p2 = p1 - 1.0d0 + p3 = p2 + p2 + p2 + eps = ABS( p3-1.0d0 ) + if ( eps.eq.0.0d0 ) go to 1 + if ( tol.le.eps ) tol = SQRT( eps ) + rndoff = eps*anorm + + break_tol = 1.0d-7 +*>>> break_tol = tol +*>>> break_tol = anorm*tol + + sgn = SIGN( 1.0d0,t ) + call ZCOPY( n, v,1, w,1 ) + beta = DZNRM2( n, w,1 ) + vnorm = beta + hump = beta +* +*--- obtain the very first stepsize ... +* + SQR1 = SQRT( 0.1d0 ) + xm = 1.0d0/DBLE( m ) + p2 = tol*(((m+1)/2.72D0)**(m+1))*SQRT(2.0D0*3.14D0*(m+1)) + t_new = (1.0d0/anorm)*(p2/(4.0d0*beta*anorm))**xm + p1 = 10.0d0**(NINT( LOG10( t_new )-SQR1 )-1) + t_new = AINT( t_new/p1 + 0.55d0 ) * p1 +* +*--- step-by-step integration ... +* + 100 if ( t_now.ge.t_out ) goto 500 + + nstep = nstep + 1 + t_step = MIN( t_out-t_now, t_new ) + p1 = 1.0d0/beta + do i = 1,n + wsp(iv + i-1) = p1*w(i) + enddo + do i = 1,mh*mh + wsp(ih+i-1) = ZERO + enddo +* +*--- Arnoldi loop ... +* + j1v = iv + n + do 200 j = 1,m + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + do i = 1,j + hij = ZDOTC( n, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + call ZAXPY( n, -hij, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + wsp(ih+(j-1)*mh+i-1) = hij + enddo + hj1j = DZNRM2( n, wsp(j1v),1 ) +*--- if `happy breakdown' go straightforward at the end ... + if ( hj1j.le.break_tol ) then + print*,'happy breakdown: mbrkdwn =',j,' h =',hj1j + k1 = 0 + ibrkflag = 1 + mbrkdwn = j + tbrkdwn = t_now + t_step = t_out-t_now + goto 300 + endif + wsp(ih+(j-1)*mh+j) = CMPLX( hj1j ) + call ZDSCAL( n, 1.0d0/hj1j, wsp(j1v),1 ) + j1v = j1v + n + 200 continue + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + avnorm = DZNRM2( n, wsp(j1v),1 ) +* +*--- set 1 for the 2-corrected scheme ... +* + 300 continue + wsp(ih+m*mh+m+1) = ONE +* +*--- loop while ireject> 1. However the solution can still be +* relatively fairly accurate even when the hump is large (the hump +* is an upper bound), especially when the hump and the scaled norm +* of w [this is also computed and returned in wsp(10)] are of the +* same order of magnitude (further details in reference below). +* +*----------------------------------------------------------------------| +*-----The following parameters may also be adjusted herein-------------| +* + integer mxstep, mxreject, ideg + double precision delta, gamma + parameter( mxstep = 500, + . mxreject = 0, + . ideg = 6, + . delta = 1.2d0, + . gamma = 0.9d0 ) + +* mxstep : maximum allowable number of integration steps. +* The value 0 means an infinite number of steps. +* +* mxreject: maximum allowable number of rejections at each step. +* The value 0 means an infinite number of rejections. +* +* ideg : the Pade approximation of type (ideg,ideg) is used as +* an approximation to exp(H). The value 0 switches to the +* uniform rational Chebyshev approximation of type (14,14) +* +* delta : local truncation error `safety factor' +* +* gamma : stepsize `shrinking factor' +* +*----------------------------------------------------------------------| +* Roger B. Sidje (rbs@maths.uq.edu.au) +* EXPOKIT: Software Package for Computing Matrix Exponentials. +* ACM - Transactions On Mathematical Software, 24(1):130-156, 1998 +*----------------------------------------------------------------------| +* + complex*16 ZERO, ONE + parameter( ZERO=(0.0d0,0.0d0), ONE=(1.0d0,0.0d0) ) + integer i, j, k1, mh, mx, iv, ih, j1v, ns, ifree, lfree, iexph, + . ireject,ibrkflag,mbrkdwn, nmult, nreject, nexph, nscale, + . nstep + double precision sgn, t_out, tbrkdwn, step_min,step_max, err_loc, + . s_error, x_error, t_now, t_new, t_step, t_old, + . xm, beta, break_tol, p1, p2, p3, eps, rndoff, + . vnorm, avnorm, hj1j, hump, SQR1 + complex*16 hjj + + intrinsic AINT,ABS,CMPLX,DBLE,INT,LOG10,MAX,MIN,NINT,SIGN,SQRT + complex*16 ZDOTC + double precision DZNRM2 +* +*--- check restrictions on input parameters ... +* + iflag = 0 + if ( lwsp.lt.n*(m+2)+5*(m+2)**2+ideg+1 ) iflag = -1 + if ( liwsp.lt.m+2 ) iflag = -2 + if ( m.ge.n .or. m.le.0 ) iflag = -3 + if ( iflag.ne.0 ) stop 'bad sizes (in input of DHEXPV)' +* +*--- initialisations ... +* + k1 = 2 + mh = m + 2 + iv = 1 + ih = iv + n*(m+1) + n + ifree = ih + mh*mh + lfree = lwsp - ifree + 1 + + ibrkflag = 0 + mbrkdwn = m + nmult = 0 + nreject = 0 + nexph = 0 + nscale = 0 + + t_out = ABS( t ) + tbrkdwn = 0.0d0 + step_min = t_out + step_max = 0.0d0 + nstep = 0 + s_error = 0.0d0 + x_error = 0.0d0 + t_now = 0.0d0 + t_new = 0.0d0 + + p1 = 4.0d0/3.0d0 + 1 p2 = p1 - 1.0d0 + p3 = p2 + p2 + p2 + eps = ABS( p3-1.0d0 ) + if ( eps.eq.0.0d0 ) go to 1 + if ( tol.le.eps ) tol = SQRT( eps ) + rndoff = eps*anorm + + break_tol = 1.0d-7 +*>>> break_tol = tol +*>>> break_tol = anorm*tol + + sgn = SIGN( 1.0d0,t ) + call ZCOPY( n, v,1, w,1 ) + beta = DZNRM2( n, w,1 ) + vnorm = beta + hump = beta +* +*--- obtain the very first stepsize ... +* + SQR1 = SQRT( 0.1d0 ) + xm = 1.0d0/DBLE( m ) + p2 = tol*(((m+1)/2.72D0)**(m+1))*SQRT(2.0D0*3.14D0*(m+1)) + t_new = (1.0d0/anorm)*(p2/(4.0d0*beta*anorm))**xm + p1 = 10.0d0**(NINT( LOG10( t_new )-SQR1 )-1) + t_new = AINT( t_new/p1 + 0.55d0 ) * p1 +* +*--- step-by-step integration ... +* + 100 if ( t_now.ge.t_out ) goto 500 + + nstep = nstep + 1 + t_step = MIN( t_out-t_now, t_new ) + beta = DZNRM2( n, w,1 ) + p1 = 1.0d0/beta + do i = 1,n + wsp(iv + i-1) = p1*w(i) + enddo + do i = 1,mh*mh + wsp(ih+i-1) = ZERO + enddo +* +*--- Lanczos loop ... +* + j1v = iv + n + do 200 j = 1,m + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + if ( j.gt.1 ) + . call ZAXPY(n,-wsp(ih+(j-1)*mh+j-2),wsp(j1v-2*n),1,wsp(j1v),1) + hjj = ZDOTC( n, wsp(j1v-n),1, wsp(j1v),1 ) + call ZAXPY( n, -hjj, wsp(j1v-n),1, wsp(j1v),1 ) + hj1j = DZNRM2( n, wsp(j1v),1 ) + wsp(ih+(j-1)*(mh+1)) = hjj +*--- if `happy breakdown' go straightforward at the end ... + if ( hj1j.le.break_tol ) then + print*,'happy breakdown: mbrkdwn =',j,' h =',hj1j + k1 = 0 + ibrkflag = 1 + mbrkdwn = j + tbrkdwn = t_now + t_step = t_out-t_now + goto 300 + endif + wsp(ih+(j-1)*mh+j) = CMPLX( hj1j ) + wsp(ih+j*mh+j-1) = CMPLX( hj1j ) + call ZDSCAL( n, 1.0d0/hj1j, wsp(j1v),1 ) + j1v = j1v + n + 200 continue + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + avnorm = DZNRM2( n, wsp(j1v),1 ) +* +*--- set 1 for the 2-corrected scheme ... +* + 300 continue + wsp(ih+m*mh+m-1) = ZERO + wsp(ih+m*mh+m+1) = ONE +* +*--- loop while ireject>> break_tol = tol +*>>> break_tol = anorm*tol + +* +*--- step-by-step integration ... +* + sgn = SIGN( 1.0d0,t ) + SQR1 = SQRT( 0.1d0 ) + call DCOPY( n, v,1, w,1 ) + + 100 if ( t_now.ge.t_out ) goto 500 + + nmult = nmult + 1 + call matvec( w, wsp(iv) ) + call DAXPY( n, 1.0d0, u,1, wsp(iv),1 ) + beta = DNRM2( n, wsp(iv),1 ) + if ( beta.eq.0.0d0 ) goto 500 + call DSCAL( n, 1.0d0/beta, wsp(iv),1 ) + do i = 1,mh*mh + wsp(ih+i-1) = 0.0d0 + enddo + + if ( nstep.eq.0 ) then +*--- obtain the very first stepsize ... + xm = 1.0d0/DBLE( m ) + p1 = tol*(((m+1)/2.72D0)**(m+1))*SQRT(2.0D0*3.14D0*(m+1)) + t_new = (1.0d0/anorm)*(p1/(4.0d0*beta*anorm))**xm + p1 = 10.0d0**(NINT( LOG10( t_new )-SQR1 )-1) + t_new = AINT( t_new/p1 + 0.55d0 ) * p1 + endif + nstep = nstep + 1 + t_step = MIN( t_out-t_now, t_new ) +* +*--- Arnoldi loop ... +* + j1v = iv + n + do 200 j = 1,m + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + do i = 1,j + hij = DDOT( n, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + call DAXPY( n, -hij, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + wsp(ih+(j-1)*mh+i-1) = hij + enddo + hj1j = DNRM2( n, wsp(j1v),1 ) +*--- if `happy breakdown' go straightforward at the end ... + if ( hj1j.le.break_tol ) then + print*,'happy breakdown: mbrkdwn =',j,' h =',hj1j + k1 = 0 + ibrkflag = 1 + mbrkdwn = j + tbrkdwn = t_now + t_step = t_out-t_now + goto 300 + endif + wsp(ih+(j-1)*mh+j) = hj1j + call DSCAL( n, 1.0d0/hj1j, wsp(j1v),1 ) + j1v = j1v + n + 200 continue + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + avnorm = DNRM2( n, wsp(j1v),1 ) +* +*--- set 1's for the 3-extended scheme ... +* + 300 continue + wsp(ih+mh*mbrkdwn) = 1.0d0 + wsp(ih+(m-1)*mh+m) = 0.0d0 + do i = 1,k1-1 + wsp(ih+(m+i)*mh+m+i-1) = 1.0d0 + enddo +* +*--- loop while ireject>> break_tol = tol +*>>> break_tol = anorm*tol + +* +*--- step-by-step integration ... +* + sgn = SIGN( 1.0d0,t ) + SQR1 = SQRT( 0.1d0 ) + call DCOPY( n, v,1, w,1 ) + + 100 if ( t_now.ge.t_out ) goto 500 + + nmult = nmult + 1 + call matvec( w, wsp(iv) ) + call DAXPY( n, 1.0d0, u,1, wsp(iv),1 ) + beta = DNRM2( n, wsp(iv),1 ) + if ( beta.eq.0.0d0 ) goto 500 + call DSCAL( n, 1.0d0/beta, wsp(iv),1 ) + do i = 1,mh*mh + wsp(ih+i-1) = 0.0d0 + enddo + + if ( nstep.eq.0 ) then +*--- obtain the very first stepsize ... + xm = 1.0d0/DBLE( m ) + p1 = tol*(((m+1)/2.72D0)**(m+1))*SQRT(2.0D0*3.14D0*(m+1)) + t_new = (1.0d0/anorm)*(p1/(4.0d0*beta*anorm))**xm + p1 = 10.0d0**(NINT( LOG10( t_new )-SQR1 )-1) + t_new = AINT( t_new/p1 + 0.55d0 ) * p1 + endif + nstep = nstep + 1 + t_step = MIN( t_out-t_now, t_new ) +* +*--- Lanczos loop ... +* + j1v = iv + n + do 200 j = 1,m + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + if ( j.gt.1 ) + . call DAXPY(n,-wsp(ih+(j-1)*mh+j-2),wsp(j1v-2*n),1,wsp(j1v),1) + hjj = DDOT( n, wsp(j1v-n),1, wsp(j1v),1 ) + call DAXPY( n, -hjj, wsp(j1v-n),1, wsp(j1v),1 ) + hj1j = DNRM2( n, wsp(j1v),1 ) + wsp(ih+(j-1)*(mh+1)) = hjj +*--- if `happy breakdown' go straightforward at the end ... + if ( hj1j.le.break_tol ) then + print*,'happy breakdown: mbrkdwn =',j,' h =',hj1j + k1 = 0 + ibrkflag = 1 + mbrkdwn = j + tbrkdwn = t_now + t_step = t_out-t_now + goto 300 + endif + wsp(ih+(j-1)*mh+j) = hj1j + wsp(ih+j*mh+j-1) = hj1j + call DSCAL( n, 1.0d0/hj1j, wsp(j1v),1 ) + j1v = j1v + n + 200 continue + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + avnorm = DNRM2( n, wsp(j1v),1 ) +* +*--- set 1's for the 3-extended scheme ... +* + 300 continue + wsp(ih+mh*mbrkdwn) = 1.0d0 + wsp(ih+m*mh+m-1) = 0.0d0 + wsp(ih+(m-1)*mh+m) = 0.0d0 + do i = 1,k1-1 + wsp(ih+(m+i)*mh+m+i-1) = 1.0d0 + enddo +* +*--- loop while ireject>> break_tol = tol +*>>> break_tol = anorm*tol + + sgn = SIGN( 1.0d0,t ) + SQR1 = SQRT( 0.1d0 ) + call ZCOPY( n, v,1, w,1 ) +* +*--- step-by-step integration ... +* + 100 if ( t_now.ge.t_out ) goto 500 + + nmult = nmult + 1 + call matvec( w, wsp(iv) ) + call ZAXPY( n, ONE, u,1, wsp(iv),1 ) + beta = DZNRM2( n, wsp(iv),1 ) + if ( beta.eq.0.0d0 ) goto 500 + call ZDSCAL( n, 1.0d0/beta, wsp(iv),1 ) + do i = 1,mh*mh + wsp(ih+i-1) = ZERO + enddo + + if ( nstep.eq.0 ) then +*--- obtain the very first stepsize ... + xm = 1.0d0/DBLE( m ) + p1 = tol*(((m+1)/2.72D0)**(m+1))*SQRT(2.0D0*3.14D0*(m+1)) + t_new = (1.0d0/anorm)*(p1/(4.0d0*beta*anorm))**xm + p1 = 10.0d0**(NINT( LOG10( t_new )-SQR1 )-1) + t_new = AINT( t_new/p1 + 0.55d0 ) * p1 + endif + nstep = nstep + 1 + t_step = MIN( t_out-t_now, t_new ) +* +*--- Arnoldi loop ... +* + j1v = iv + n + do 200 j = 1,m + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + do i = 1,j + hij = ZDOTC( n, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + call ZAXPY( n, -hij, wsp(iv+(i-1)*n),1, wsp(j1v),1 ) + wsp(ih+(j-1)*mh+i-1) = hij + enddo + hj1j = DZNRM2( n, wsp(j1v),1 ) +*--- if `happy breakdown' go straightforward at the end ... + if ( hj1j.le.break_tol ) then + print*,'happy breakdown: mbrkdwn =',j,' h =',hj1j + k1 = 0 + ibrkflag = 1 + mbrkdwn = j + tbrkdwn = t_now + t_step = t_out-t_now + goto 300 + endif + wsp(ih+(j-1)*mh+j) = CMPLX( hj1j ) + call ZDSCAL( n, 1.0d0/hj1j, wsp(j1v),1 ) + j1v = j1v + n + 200 continue + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + avnorm = DZNRM2( n, wsp(j1v),1 ) +* +*--- set 1's for the 3-extended scheme ... +* + 300 continue + wsp(ih+mh*mbrkdwn) = ONE + wsp(ih+(m-1)*mh+m) = ZERO + do i = 1,k1-1 + wsp(ih+(m+i)*mh+m+i-1) = ONE + enddo +* +*--- loop while ireject>> break_tol = tol +*>>> break_tol = anorm*tol + + sgn = SIGN( 1.0d0,t ) + SQR1 = SQRT( 0.1d0 ) + call ZCOPY( n, v,1, w,1 ) +* +*--- step-by-step integration ... +* + 100 if ( t_now.ge.t_out ) goto 500 + + nmult = nmult + 1 + call matvec( w, wsp(iv) ) + call ZAXPY( n, ONE, u,1, wsp(iv),1 ) + beta = DZNRM2( n, wsp(iv),1 ) + if ( beta.eq.0.0d0 ) goto 500 + call ZDSCAL( n, 1.0d0/beta, wsp(iv),1 ) + do i = 1,mh*mh + wsp(ih+i-1) = ZERO + enddo + + if ( nstep.eq.0 ) then +*--- obtain the very first stepsize ... + xm = 1.0d0/DBLE( m ) + p1 = tol*(((m+1)/2.72D0)**(m+1))*SQRT(2.0D0*3.14D0*(m+1)) + t_new = (1.0d0/anorm)*(p1/(4.0d0*beta*anorm))**xm + p1 = 10.0d0**(NINT( LOG10( t_new )-SQR1 )-1) + t_new = AINT( t_new/p1 + 0.55d0 ) * p1 + endif + nstep = nstep + 1 + t_step = MIN( t_out-t_now, t_new ) +* +*--- Lanczos loop ... +* + j1v = iv + n + do 200 j = 1,m + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + if ( j.gt.1 ) + . call ZAXPY(n,-wsp(ih+(j-1)*mh+j-2),wsp(j1v-2*n),1,wsp(j1v),1) + hjj = ZDOTC( n, wsp(j1v-n),1, wsp(j1v),1 ) + call ZAXPY( n, -hjj, wsp(j1v-n),1, wsp(j1v),1 ) + hj1j = DZNRM2( n, wsp(j1v),1 ) + wsp(ih+(j-1)*(mh+1)) = hjj + if ( hj1j.le.break_tol ) then + print*,'happy breakdown: mbrkdwn =',j,' h =',hj1j + k1 = 0 + ibrkflag = 1 + mbrkdwn = j + tbrkdwn = t_now + t_step = t_out-t_now + goto 300 + endif + wsp(ih+(j-1)*mh+j) = CMPLX( hj1j ) + wsp(ih+j*mh+j-1) = CMPLX( hj1j ) + call ZDSCAL( n, 1.0d0/hj1j, wsp(j1v),1 ) + j1v = j1v + n + 200 continue + nmult = nmult + 1 + call matvec( wsp(j1v-n), wsp(j1v) ) + avnorm = DZNRM2( n, wsp(j1v),1 ) +* +*--- set 1's for the 3-extended scheme ... +* + 300 continue + wsp(ih+mh*mbrkdwn) = ONE + wsp(ih+m*mh+m-1) = ZERO + wsp(ih+(m-1)*mh+m) = ZERO + do i = 1,k1-1 + wsp(ih+(m+i)*mh+m+i-1) = ONE + enddo +* +*--- loop while irejectgetChild(paintedchildren[0])->getBL(); + while (!done) { + Node * cnd = this->getChild(paintedchildren[0]); + } + } + */ + for (unsigned int i = 0; i < paintedchildren.size(); i++) { + if (i == 0) { + ret += "("; + } + ret += this->getChild(paintedchildren[i])->getPaintedNewick(bl); + if (bl) { + std::ostringstream o; + // 20 is what you get from raxml + o << std::setprecision(20) << this->getChild(paintedchildren[i])->getBL(); + ret += ":" + o.str(); + } + if (i == paintedchildren.size()-1) { + ret += ")"; + } else { + ret += ","; + } + } + if (!this->getName().empty()) { + ret += this->getName(); + } + return ret; +} + + +/* + * should be returning the stringnodeobjects as the names for internal + * nodes with the [&obj=string] + * needs to be a string in setObject + */ +std::string Node::getNewick (bool bl, const std::string& obj) { + std::string ret; + for (unsigned int i = 0; i < this->getChildCount(); i++) { + if (i == 0) { + ret += "("; + } + ret += this->getChild(i)->getNewick(bl, obj); + if (bl) { + std::ostringstream o; + o << this->getChild(i)->getBL(); + ret += ":" + o.str(); + } + if (i == this->getChildCount()-1) { + ret += ")"; + } else { + ret += ","; + } + } + if (!this->name_.empty()) { + ret = ret + this->name_; + } + if (this->getObject(obj) != nullptr) { + std::ostringstream o; + o << (*(dynamic_cast(this->getObject(obj)))); + ret += "[&"+obj+"="+o.str()+"]"; + } + return ret; +} + + +Node * Node::getParent () const { + return parent_; +} + + +unsigned int Node::getChildCount () { + return static_cast(children_.size()); +} + + +void Node::assocObject (const std::string& name, NodeObject& obj) { + if (assoc_.count(name) > 0) { + delete assoc_[name]; + } + assoc_[name] = obj.clone(); +} + + +void Node::assocDoubleVector (const std::string& name, std::vector& obj) { + if (assocDV_.count(name) > 0) { + assocDV_.erase(name); + } + std::vector tvec (obj.size()); + for (unsigned int i = 0; i < obj.size(); i++) { + tvec[i] = obj[i]; + } + assocDV_[name] = tvec; +} + + +std::vector * Node::getDoubleVector (const std::string& name) { + return &assocDV_[name]; +} + + +void Node::deleteDoubleVector (const std::string& name) { + if (assocDV_.count(name) > 0) { + assocDV_.erase(name); + } +} + + +/* + * gets the number of leaves from this node + */ +int Node::get_num_leaves () { + int retnum = 0; + std::stack nodes; + nodes.push(this); + while (!nodes.empty()) { + Node * nd = nodes.top(); + nodes.pop(); + if (nd->getChildCount() > 0) { + for (unsigned int i = 0; i < nd->getChildCount(); i++) { + nodes.push(nd->getChild(i)); + } + } else { + retnum += 1; + } + } + return retnum; +} + + +/* + * gets the leaves from this node + */ +std::vector Node::get_leaves () { + std::vector retnodes; + std::stack nodes; + nodes.push(this); + while (!nodes.empty()) { + Node * nd = nodes.top(); + nodes.pop(); + if (nd->getChildCount() > 0) { + for (unsigned int i = 0; i < nd->getChildCount(); i++) { + nodes.push(nd->getChild(i)); + } + } else { + retnodes.push_back(nd); + } + } + return retnodes; +} + + +/* + * gets the leaves from this node + */ +std::set Node::get_leaves_set () { + std::set retnodes; + std::stack nodes; + nodes.push(this); + while (!nodes.empty()) { + Node * nd = nodes.top(); + nodes.pop(); + if (nd->getChildCount() > 0) { + for (unsigned int i = 0; i < nd->getChildCount(); i++) { + nodes.push(nd->getChild(i)); + } + } else { + retnodes.insert(nd); + } + } + return retnodes; +} + + +std::set Node::get_leave_names_set () { + std::stack nodes; + std::set names; + nodes.push(this); + while (!nodes.empty()) { + Node * nd = nodes.top(); + nodes.pop(); + if (nd->getChildCount() > 0) { + for (unsigned int i = 0; i < nd->getChildCount(); i++) { + nodes.push(nd->getChild(i)); + } + } else { + names.insert(nd->getName()); + } + } + return names; +} + + +std::vector Node::get_leave_names () { + std::stack nodes; + std::vector names; + nodes.push(this); + while (!nodes.empty()) { + Node * nd = nodes.top(); + nodes.pop(); + if (nd->getChildCount() > 0) { + for (unsigned int i = 0; i < nd->getChildCount(); i++) { + nodes.push(nd->getChild(i)); + } + } else { + names.push_back(nd->getName()); + } + } + return names; +} + + +/* + * use the string ones like this + * StringNodeObject sno("...a node object"); + * tree.getRoot()->assocObject("test", sno); + * std::cout << *((StringNodeObject*) (tree.getRoot()->getObject("test"))) << std::endl; + * + * and the vector like + * VectorNodeObject vno; + * vno.push_back(1);vno.push_back(2); + * tree.getRoot()->assocObject("testvno", vno); + * std::cout << ((VectorNodeObject *) (tree.getRoot()->getObject("testvno")))->at(0) << std::endl; + */ +NodeObject * Node::getObject (const std::string& name) { + return assoc_[name]; +} + + +void Node::initSegVector () { + segs_ = new std::vector (); +} + + +std::vector * Node::getSegVector () const { + return segs_; +} + + +void Node::deleteSegVector () { + delete segs_; +} + + +/* + * delete the node + */ +Node::~Node () { + std::map::iterator it; + for (it = assoc_.begin(); it != assoc_.end(); ++it) { + delete assoc_[it->first]; + } +} diff --git a/src/node.h b/src/node.h new file mode 100644 index 0000000..d82a2c4 --- /dev/null +++ b/src/node.h @@ -0,0 +1,85 @@ +#ifndef PX_NODE_H +#define PX_NODE_H + +#include +#include +#include + +#include "branch_segment.h" +#include "vector_node_object.h" +#include "superdouble.h" + +class Node { +private: + double BL_; // branch length, points to parent + double height_; // could be from tip or from root. need to be consistent + double depth_; // not being used. should be + unsigned int number_; + std::string name_; + Node * parent_; + // children are _immediate_ children, not all descendants + std::vector children_; + std::map assoc_; + std::map > assocDV_; + std::vector * segs_; + std::string comment_; + bool painted_; + +public: + Node (); + explicit Node (Node * inparent); + // not used + Node (double bl, unsigned int innumber, std::string inname, Node * inparent); + + int get_num_leaves (); + std::vector get_leaves (); + std::vector get_leave_names (); + std::set get_leave_names_set (); + std::set get_leaves_set (); + + std::vector getChildren () const; + bool isExternal (); + bool isInternal (); + bool isRoot (); + bool isKnuckle (); + bool hasParent (); + void setParent (Node& p); + unsigned int getNumber () const; + void setNumber (unsigned int n); + bool getPainted () const; + void setPainted (bool p); + double getBL () const; + void setBL (double bl); + double getHeight () const; + void setHeight (double he); + double getDepth () const; + void setDepth (double de); + bool hasChild (Node& test); + bool addChild (Node& c); + bool removeChild (Node& c); + Node * getChild (unsigned int c); + std::string getName () const; + std::string getComment () const; + void setName (std::string s); + void setComment (std::string s); + std::string getNewick (bool bl); + std::string getTreeStringNexus (bool bl); + std::string getNewick (bool bl, const std::string& obj); + std::string getPaintedNewick (bool bl); + Node * getParent () const; + unsigned int getChildCount (); + void assocObject (const std::string& name, NodeObject& obj); + void assocDoubleVector (const std::string& name, std::vector& obj); + std::vector * getDoubleVector (const std::string& name); + void deleteDoubleVector (const std::string& name); + NodeObject * getObject (const std::string& name); + void initSegVector (); + std::vector * getSegVector () const; + void deleteSegVector (); + + VectorNodeObject seg_sp_stoch_map_revB_time; //segment specific rev B, combining the tempA and the ENLT + VectorNodeObject seg_sp_stoch_map_revB_number; //segment specific rev B, combining the tempA and the ENLT + ~Node (); +}; + +#endif /* PX_NODE_H */ diff --git a/src/node_object.h b/src/node_object.h new file mode 100644 index 0000000..62e5e0c --- /dev/null +++ b/src/node_object.h @@ -0,0 +1,16 @@ +#ifndef PX_NODE_OBJECT_H +#define PX_NODE_OBJECT_H + + +class NodeObject { + +public: + NodeObject() {} + + virtual ~NodeObject() {} + +public: + virtual NodeObject * clone() const = 0; +}; + +#endif /* PX_NODE_OBJECT_H */ diff --git a/src/optimize_cont_models_nlopt.cpp b/src/optimize_cont_models_nlopt.cpp new file mode 100644 index 0000000..d76c537 --- /dev/null +++ b/src/optimize_cont_models_nlopt.cpp @@ -0,0 +1,195 @@ +#include +#include +#include +#include + +#include "cont_models.h" + +#include +using namespace arma; + +#define LARGE 1000000000 + + +typedef struct { + rowvec x; + mat ovcv; +} analysis_data; + + +typedef struct { + Tree * tree; +} analysis_data_tree; + + +double nlopt_bm_sr (unsigned n, const double *x, double *grad, void *data) { + if (x[1] <= 0) { + return LARGE; + } + std::cout << x[0] << " " << x[1] << std::endl; + analysis_data * d = (analysis_data *) data; + mat tvcv = (d->ovcv) * x[1]; + rowvec m = rowvec(d->x.n_cols); + m.fill(x[0]); + double like = norm_pdf_multivariate(d->x, m, tvcv); + return -like; +} + + +double nlopt_bm_sr_log (unsigned n, const double *x, double *grad, void *data) { + if (x[1] <= 0) { + return LARGE; + } + //std::cout << x[0] << " " << x[1] << std::endl; + analysis_data * d = (analysis_data *) data; + mat tvcv = (d->ovcv) * x[1]; + rowvec m = rowvec(d->x.n_cols); + m.fill(x[0]); + double like = norm_log_pdf_multivariate(d->x, m, tvcv); + return -like; +} + + +/* + * single alpha ou + */ +double nlopt_ou_sr_log (unsigned n, const double *x, double *grad, void *data) { + if (x[1] <= 0 || x[2] <= 0) { + return LARGE; + } + double alpha = x[2]; + analysis_data * d = (analysis_data *) data; + mat vcvDiag(d->ovcv.n_cols, d->ovcv.n_cols); + vcvDiag.zeros(); + vcvDiag.diag() = (d->ovcv).diag(); + mat tm(vcvDiag.n_cols,vcvDiag.n_cols); + tm.ones(); + mat diagi = trans(vcvDiag * tm); + mat diagj = vcvDiag * tm; + mat Tij = diagi + diagj - (2 * d->ovcv); + mat ouvcv = (1. / (2. * alpha)) * exp(-alpha * Tij) % (1. - exp(-2. * alpha * d->ovcv)); + ouvcv = ouvcv * x[1]; + rowvec m = rowvec(d->x.n_cols); + m.fill(x[0]); + double like = norm_log_pdf_multivariate(d->x, m, ouvcv); + return -like; +} + + +double nlopt_bm_bl (unsigned n, const double *x, double *grad, void *data) { + for (unsigned int i = 0; i < n; i++) { + if (x[i] <= 0) { + return LARGE; + } + } + double sigma = 1; // x[0];//1; + analysis_data_tree * d = (analysis_data_tree *) data; + Tree * tr = d->tree; + for (unsigned int i = 0; i < tr->getNodeCount(); i++) { + if (tr->getNode(i) != tr->getRoot()) { + tr->getNode(i)->setBL(x[i+1]); + } + } + double like = calc_bm_prune(tr,sigma); + //std::cout << like <<" " << sigma << std::endl; + return -like; +} + + +std::vector optimize_single_rate_bm_nlopt (rowvec& _x, mat& _vcv, + bool log) { + analysis_data a; + a.x = _x; + a.ovcv = _vcv; + + //nlopt::opt opt(nlopt::LN_NELDERMEAD, 2); + //nlopt::opt opt(nlopt::LN_BOBYQA,2); + //BOBYQA is better but the other finishes more + nlopt::opt opt(nlopt::LN_SBPLX, 2); + //nlopt::opt opt(nlopt::LN_PRAXIS,2); + + opt.set_lower_bounds(0.000000001); + opt.set_upper_bounds(100000); + opt.set_ftol_abs(0.000001); + if (log) { + opt.set_min_objective(nlopt_bm_sr_log, &a); + } else { + opt.set_min_objective(nlopt_bm_sr, &a); + } + opt.set_xtol_rel(0.000001); + opt.set_maxeval(5000); + + double minf; + //2 parameters, 1 anc, 2 rate + std::vector x(2,1); + //nlopt::result result = opt.optimize(x, minf); + opt.optimize(x, minf); + std::vector results; + results.push_back(x[0]); + results.push_back(x[1]); + results.push_back(minf); + return results; +} + +std::vector optimize_single_rate_bm_ou_nlopt (rowvec& _x, mat& _vcv) { + analysis_data a; + a.x = _x; + a.ovcv = _vcv; + + //nlopt::opt opt(nlopt::LN_NELDERMEAD, 3); + //BOBYQA is better but the other finishes more + //nlopt::opt opt(nlopt::LN_BOBYQA,3); + nlopt::opt opt(nlopt::LN_SBPLX, 3); + //nlopt::opt opt(nlopt::LN_PRAXIS,3); + opt.set_min_objective(nlopt_ou_sr_log, &a); + opt.set_lower_bounds(0.000000001); + opt.set_upper_bounds(100000); + opt.set_xtol_rel(0.000001); + opt.set_ftol_rel(0.00001); + opt.set_maxeval(5000); + double minf; + //2 parameters, 1 anc, 2 rate, 3 alpha + std::vector x(3, 1); + //nlopt::result result = opt.optimize(x, minf); + opt.optimize(x, minf); +// std::cout << result << std::endl; + std::vector results; + results.push_back(x[0]); + results.push_back(x[1]); + results.push_back(x[2]); + results.push_back(minf); + return results; +} + + +// not used +std::vector optimize_single_rate_bm_bl (Tree * tr) { + analysis_data_tree a; + a.tree = tr; + int n = static_cast(1 + tr->getNodeCount() - 1); // ?!? + //nlopt::opt opt(nlopt::LN_NELDERMEAD, n); + //BOBYQA is better but the other finishes more + //nlopt::opt opt(nlopt::LN_BOBYQA,n); + nlopt::opt opt(nlopt::LN_SBPLX,n); + //nlopt::opt opt(nlopt::LN_COBYLA,n); + //nlopt::opt opt(nlopt::LN_PRAXIS,n); + opt.set_min_objective(nlopt_bm_bl, &a); + opt.set_lower_bounds(0.0001); + opt.set_upper_bounds(100000); + opt.set_xtol_rel(0.000001); + opt.set_ftol_rel(0.000001); + opt.set_maxeval(100000); + double minf; + std::vector x(n, 1); + nlopt::result result = opt.optimize(x, minf); + std::cout << result << std::endl; + std::vector results; + for (unsigned int i = 0; i < tr->getNodeCount(); i++) { + if (tr->getNode(i) != tr->getRoot()) { + tr->getNode(i)->setBL(x[i+1]); + } + } + results.push_back(x[0]); + results.push_back(minf); + return results; +} diff --git a/src/optimize_cont_models_nlopt.h b/src/optimize_cont_models_nlopt.h new file mode 100644 index 0000000..2dd6353 --- /dev/null +++ b/src/optimize_cont_models_nlopt.h @@ -0,0 +1,22 @@ +#ifndef PX_OPTIMIZE_CONT_MODELS_NLOPT_H +#define PX_OPTIMIZE_CONT_MODELS_NLOPT_H + +#include +#include + +#include "cont_models.h" + +class Tree; // forward declaration + +#include +using namespace arma; + +double nlopt_bm_sr(unsigned n, const double *x, double *grad, void *data); +double nlopt_bm_sr_log(unsigned n, const double *x, double *grad, void *data); +double nlopt_ou_sr_log(unsigned n, const double *x, double *grad, void *data); +double nlopt_bm_bl(unsigned n, const double *x, double *grad, void *data); +std::vector optimize_single_rate_bm_nlopt(rowvec& _x, mat& _vcv, bool log); +std::vector optimize_single_rate_bm_ou_nlopt(rowvec& _x, mat& _vcv); +std::vector optimize_single_rate_bm_bl(Tree * tr); + +#endif /* PX_OPTIMIZE_CONT_MODELS_NLOPT_H */ diff --git a/src/optimize_state_reconstructor_nlopt.cpp b/src/optimize_state_reconstructor_nlopt.cpp new file mode 100644 index 0000000..73af0c5 --- /dev/null +++ b/src/optimize_state_reconstructor_nlopt.cpp @@ -0,0 +1,90 @@ +#include +//#include +#include +#include + +#include "optimize_state_reconstructor_nlopt.h" +#include "state_reconstructor.h" +#include "rate_model.h" + +#include +using namespace arma; + + +StateReconstructor * nloptsr; +RateModel * nloptrm; +mat * nloptfree_variables; + + +double nlopt_sr (unsigned n, const double *x, double *grad, void *my_func_data) { + for (unsigned int i = 0; i < nloptfree_variables->n_rows; i++) { + for (unsigned int j = 0; j < nloptfree_variables->n_cols; j++) { + if (i != j) { + nloptrm->set_Q_cell(i, j,x[int((*nloptfree_variables)(i, j))]); + if (nloptrm->get_Q()(i, j) < 0 || nloptrm->get_Q()(i, j) >= 1000) { + return 1000000000000; + } + } + } + } + double like; + nloptrm->set_Q_diag(); + like = nloptsr->eval_likelihood(); + if (nloptrm->neg_p) { + like = 10000000000000; + } + //std::cout << like << std::endl; + if (like < 0 || like == std::numeric_limits::infinity()) { + like = 10000000000000; + } + return like; +} + +void optimize_sr_nlopt (RateModel * _rm,StateReconstructor * _sr, + mat * _free_mask, int _nfree) { + nloptsr = _sr; + nloptrm = _rm; + nloptfree_variables = _free_mask; + + nlopt::opt opt(nlopt::LN_NELDERMEAD, _nfree); + //nlopt::opt opt(nlopt::LN_BOBYQA, _nfree); + //nlopt::opt opt(nlopt::LN_PRAXIS, _nfree); + //nlopt::opt opt(nlopt::LN_SBPLX, _nfree); + //nlopt::opt opt(nlopt::LN_COBYLA, _nfree); + //nlopt::opt opt(nlopt::LN_NEWUOA, _nfree); + + opt.set_lower_bounds(0.0000); + opt.set_upper_bounds(100000); + opt.set_min_objective(nlopt_sr, nullptr); + opt.set_xtol_rel(0.001); + opt.set_maxeval(5000); + + std::vector x(_nfree,0); + for (unsigned int i = 0; i < _rm->get_Q().n_rows; i++) { + for (unsigned int j = 0; j < _rm->get_Q().n_cols; j++) { + if (i != j) { + x[int((*_free_mask)(i, j))] = _rm->get_Q()(i, j); + //std::cout << x[int((*_free_mask)(i, j))] << " "; + } + } + //std::cout << std::endl; + } + + //double minf; + std::vector result = opt.optimize(x); + for (unsigned int i = 0; i < _rm->get_Q().n_rows; i++) { + for (unsigned int j = 0; j < _rm->get_Q().n_cols; j++) { + if (i != j) { + (*_free_mask)(i, j) = result[int((*_free_mask)(i, j))]; + //std::cout << x[int((*_free_mask)(i, j))] << " "; + } + } + //std::cout << std::endl; + } + //if ((&minf) < 0) { + // printf("nlopt failed!\n"); + //} + //else { + // printf("found minimum at %0.10g\n", x[0], x[1], minf); + //} +} diff --git a/src/optimize_state_reconstructor_nlopt.h b/src/optimize_state_reconstructor_nlopt.h new file mode 100644 index 0000000..0f2c97a --- /dev/null +++ b/src/optimize_state_reconstructor_nlopt.h @@ -0,0 +1,14 @@ +#ifndef PX_OPTIMIZE_STATE_RECONSTRUCTOR_NLOPT_H +#define PX_OPTIMIZE_STATE_RECONSTRUCTOR_NLOPT_H + +#include + +class RateModel; // forward declaration +class StateReconstructor; // forward declaration + +#include +using namespace arma; + +void optimize_sr_nlopt(RateModel * _rm,StateReconstructor * _sr, mat * _free_mask, int _nfree); + +#endif /* PX_OPTIMIZE_STATE_RECONSTRUCTOR_NLOPT_H */ diff --git a/src/optimize_state_reconstructor_periods_nlopt.cpp b/src/optimize_state_reconstructor_periods_nlopt.cpp new file mode 100644 index 0000000..0458477 --- /dev/null +++ b/src/optimize_state_reconstructor_periods_nlopt.cpp @@ -0,0 +1,102 @@ +#include +//#include +#include +#include +#include + +#include "optimize_state_reconstructor_periods_nlopt.h" +#include "state_reconstructor.h" +#include "rate_model.h" + +#include +using namespace arma; + + +StateReconstructor * nloptsr_periods; +std::vector * nloptrm_periods; +std::vector * nloptfree_variables_periods; + + +double nlopt_sr_periods (unsigned n, const double *x, double *grad, + void *my_func_data) { + for (unsigned int k = 0; k < nloptfree_variables_periods->size(); k++) { + for (unsigned int i = 0; i < (*nloptfree_variables_periods)[k].n_rows; i++) { + for (unsigned int j = 0; j < (*nloptfree_variables_periods)[k].n_cols; j++) { + if (i != j) { + (*nloptrm_periods)[k].set_Q_cell(i,j,x[int(nloptfree_variables_periods->at(k)(i,j))]); + if ((*nloptrm_periods)[k].get_Q()(i,j) < 0 || (*nloptrm_periods)[k].get_Q()(i,j) >= 1000) { + return 1000000000000; + } + } + } + } + } + double like; + for (unsigned int i = 0; i < nloptrm_periods->size(); i++) { + nloptrm_periods->at(i).set_Q_diag(); + } + like = nloptsr_periods->eval_likelihood(); + for (unsigned int i = 0; i < nloptrm_periods->size(); i++) { + if (nloptrm_periods->at(i).neg_p) { + like = 10000000000000; + break; + } + } +// std::cout << like << std::endl; + if (like < 0 || like == std::numeric_limits::infinity()) { + like = 10000000000000; + } + return like; +} + +void optimize_sr_periods_nlopt (std::vector * _rm, + StateReconstructor * _sr, std::vector * _free_mask, int _nfree) { + nloptsr_periods = _sr; + nloptrm_periods = _rm; + nloptfree_variables_periods = _free_mask; + + nlopt::opt opt(nlopt::LN_NELDERMEAD, _nfree); + //nlopt::opt opt(nlopt::LN_BOBYQA, _nfree); + //nlopt::opt opt(nlopt::LN_PRAXIS, _nfree); + //nlopt::opt opt(nlopt::LN_SBPLX, _nfree); + //nlopt::opt opt(nlopt::LN_COBYLA, _nfree); + //nlopt::opt opt(nlopt::LN_NEWUOA, _nfree); + + opt.set_lower_bounds(0.0000); + opt.set_upper_bounds(100000); + opt.set_min_objective(nlopt_sr_periods, nullptr); + opt.set_xtol_rel(0.001); + opt.set_maxeval(10000); + + std::vector x(_nfree,0); + for (unsigned int k = 0; k < _rm->size(); k++) { + for (unsigned int i = 0; i < _rm->at(k).get_Q().n_rows; i++) { + for (unsigned int j = 0; j < _rm->at(k).get_Q().n_cols; j++) { + if (i != j) { + x[int((*_free_mask)[k](i, j))] = _rm->at(k).get_Q()(i, j); + //std::cout << x[int((*_free_mask)[k](i,j))] << " "; + } + } + std::cout << std::endl; + } + } + //double minf; + std::vector result = opt.optimize(x); + for (unsigned int k = 0; k < _rm->size(); k++) { + for (unsigned int i = 0; i < _rm->at(k).get_Q().n_rows; i++) { + for (unsigned int j = 0; j < _rm->at(k).get_Q().n_cols; j++) { + if (i != j) { + (*_free_mask)[k](i, j) = result[int((*_free_mask)[k](i, j))]; + //std::cout << x[int((*(*_free_mask)[k])(i,j))] << " "; + } + } + //std::cout << std::endl; + } + } + //if ((&minf) < 0) { + // printf("nlopt failed!\n"); + //} + //else { + // printf("found minimum at %0.10g\n", x[0], x[1], minf); + //} +} diff --git a/src/optimize_state_reconstructor_periods_nlopt.h b/src/optimize_state_reconstructor_periods_nlopt.h new file mode 100644 index 0000000..54a5a4a --- /dev/null +++ b/src/optimize_state_reconstructor_periods_nlopt.h @@ -0,0 +1,16 @@ +#ifndef PX_OPTIMIZE_STATE_RECONSTRUCTOR_PERIODS_NLOPT_H +#define PX_OPTIMIZE_STATE_RECONSTRUCTOR_PERIODS_NLOPT_H + +#include +#include + +class RateModel; // forward declaration +class StateReconstructor; // forward declaration + +#include +using namespace arma; + +void optimize_sr_periods_nlopt(std::vector * _rm,StateReconstructor * _sr, + std::vector * _free_mask, int _nfree); + +#endif /* PX_OPTIMIZE_STATE_RECONSTRUCTOR_PERIODS_NLOPT_H */ diff --git a/src/orphan_files/Makefile_delta b/src/orphan_files/Makefile_delta new file mode 100644 index 0000000..bb8b11a --- /dev/null +++ b/src/orphan_files/Makefile_delta @@ -0,0 +1,69 @@ +RM := rm -rf + +#this is really nothing but for testing the capabilities of the copper library +DELTA_SRC = main_delta.cpp +DELTA_OBJ = main_delta.o +DELTA_DEP = main_delta.d + +#this should be the basic copper library sources, objects and deps +CPP_SRCS += \ +./utils.cpp \ +./node.cpp \ +./tree.cpp \ +./tree_reader.cpp \ +./tree_utils.cpp \ +./bd_sim.cpp \ +./delta.cpp + +CPP_OBJS += \ +./utils.o \ +./node.o \ +./tree.o \ +./tree_reader.o \ +./tree_utils.o \ +./bd_sim.o \ +./delta.o + +CPP_DEPS += \ +./utils.d \ +./node.d \ +./tree.d \ +./tree_reader.d \ +./tree_utils.d \ +./bd_sim.d \ +./delta.d + +#REQUIRES THE GSL AND libgmpxx and libgmp libraries for optimization and large number overflow errors +########### +# loses about 3x speed +# if 64 bit GSL try CPPFLAGS="-arch x86_64" LDFLAGS="-arch x86_64" ./configure +# need to install gmp (with ./configure --enable-cxx) and mpfr and gmpfrxx +####### +CPP_LIBS = -lgsl -lgslcblas -lm -lgmpxx -lgmp -lmpfr -lgmpfrxx -fopenmp + +OPT_FLAGS += \ +-O3 -ffast-math -ftree-vectorize -g3 -Wall -fopenmp +#-g -O0 + +# Each subdirectory must supply rules for building sources it contributes +%.o: ./%.cpp + @echo 'Building file: $<' + @echo 'Invoking: GCC C++ Compiler' + g++ $(OPT_FLAGS) -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@:%.o=%.d)" -o "$@" "$<" + @echo 'Finished building: $<' + @echo ' ' + +# All Target +all: phyx_delta + +phyx_delta: $(CPP_OBJS) $(DELTA_OBJ) + @echo 'Building target: $@' + @echo 'Invoking: GCC C++ Linker' + g++ -o "phyx_delta" -L./gmpfrxx/ $(DELTA_OBJ) $(CPP_OBJS) $(CPP_LIBS) + @echo ' ' + +# Other Targets +clean: + -$(RM) *.o *.d phyx_delta + -@echo ' ' + diff --git a/src/orphan_files/Makefile_test b/src/orphan_files/Makefile_test new file mode 100644 index 0000000..ad9e697 --- /dev/null +++ b/src/orphan_files/Makefile_test @@ -0,0 +1,69 @@ +RM := rm -rf + +#this is really nothing but for testing the capabilities of the copper library +MRCA_SRC = main.cpp +MRCA_OBJ = main.o +MRCA_DEP = main.d + +#this should be the basic copper library sources, objects and deps +CPP_SRCS += \ +./utils.cpp \ +./node.cpp \ +./tree.cpp \ +./tree_reader.cpp \ +./tree_utils.cpp \ +./sequence.cpp \ +./fasta_util.cpp \ +./superdouble.cpp + +CPP_OBJS += \ +./utils.o \ +./node.o \ +./tree.o \ +./tree_reader.o \ +./tree_utils.o \ +./sequence.o \ +./fasta_util.o \ +./superdouble.o + + +CPP_DEPS += \ +./utils.d \ +./node.d \ +./tree.d \ +./tree_reader.d \ +./tree_utils.d \ +./sequence.d \ +./fasta_util.d \ +./superdouble.d + + +CPP_LIBS = -llapack -lblas -lgfortran -lpthread -lm +#gsl +#-lgsl -lgslcblas +#profileing +#-pg + +OPT_FLAGS = -O3 -ffast-math -ftree-vectorize +#profiling +#-g -pg +#-O3 -ffast-math -ftree-vectorize + +# Each subdirectory must supply rules for building sources it contributes +%.o: ./%.cpp + g++ $(OPT_FLAGS) -c -fmessage-length=0 -MMD -MP -MF"$(@:%.o=%.d)" -MT"$(@:%.o=%.d)" -o "$@" "$<" + +# All Target +all: phyx_test + +phyx_test: $(CPP_OBJS) $(MRCA_OBJ) + @echo 'Building target: $@' + @echo 'Invoking: GCC C++ Linker' + g++ -o "phyx_test" $(MRCA_OBJ) $(CPP_OBJS) $(CPP_LIBS) + @echo ' ' + +# Other Targets +clean: + -$(RM) *.o *.d phyx_test + -@echo ' ' + diff --git a/src/orphan_files/delta.cpp b/src/orphan_files/delta.cpp new file mode 100644 index 0000000..8a8fea4 --- /dev/null +++ b/src/orphan_files/delta.cpp @@ -0,0 +1,211 @@ +#include +#include +#include +#include +#include + +#include "gmpfrxx/gmpfrxx.h" +#include +#include +#include + +#include "delta.h" + +#define LARGE 100000000 +#define PMAX 1000 + + +Delta::Delta() {} + + +double Delta::shift (double p, double s, int c, int l, int r) { + if (p < 0 || s < 0 || p > PMAX || s > PMAX) + return LARGE; + double enp = exp(-p); + double ens = exp(-s); + double num = (enp*pow((1.0 - enp),(l - 1.0)))*(ens*pow((1.0 - ens),(r - 1.0))); + double den = 0; + for (int i=0; i < (l+r-1); i++) { + int il = i + 1; + den += (enp*pow((1 - enp),(il - 1)))*(ens*pow((1 - ens),((l + r) - il - 1))); + } + double bigleft = 0; + try { + bigleft = log(num/den); + } catch( char * str ) { + return LARGE; + } + double enc = exp(-c); + num = (enc*pow((1.0 - enc),(l - 1.0)))*(enc*pow((1.0 - enc),(r - 1.0))); + den = 0; + for (int i=0; i < (l+r-1); i++) { + int il = i + 1; + den = den +(enc*pow((1 - enc),(il - 1)))*(enc*pow((1 - enc),((l + r) - il - 1))); + } + + double bigright = 0; + try { + bigright = log(num/den); + } catch( char * str ) { + return LARGE; + } + //std::cout << "bl:" << bigleft << "\tbr:"<< bigright << std::endl; + return -(bigleft-bigright); +} + + +/* + * use for over/underflow problems + */ +double Delta::bigshift (double p, double s, int c, int l, int r) { + if (p < 0 || s < 0 || p > PMAX || s > PMAX) { + return LARGE; + } + mpfr_class bp,bs,bc,bl,br; + bp = p;bs = s;bc = c;bl = l;br = r; + mpfr_class expnbp = exp(-bp); + mpfr_class expnbs = exp(-bs); + mpfr_class num = (expnbp*pow((1.0 - expnbp),(bl - 1.0)))*(expnbs*pow((1.0 - expnbs),(br - 1.0))); + mpfr_class den = 0; + for (mpfr_class i=0; i < (l+r-1); i++) { + mpfr_class il=i+1; + den = den +(expnbp*pow((1 - expnbp),(il - 1)))*(expnbs*pow((1 - expnbs),((bl + br) - il - 1))); + } + mpfr_class bigleft = 0; + try{ + bigleft = log(num/den); + }catch( char * str ) { + return LARGE; + } + mpfr_class expnbc = exp(-bc); + num = (expnbc*pow((1.0 - expnbc),(bl - 1.0)))*(expnbc*pow((1.0 - expnbc),(br - 1.0))); + den = 0; + for (mpfr_class i=0; i < (l+r-1); i++) { + mpfr_class il=i+1; + den = den +(expnbc*pow((1 - expnbc),(il - 1)))*(expnbc*pow((1 - expnbc),((bl + br) - il - 1))); + } + + mpfr_class bigright = 0; + try { + bigright = log(num/den); + } catch( char * str ) { + return LARGE; + } + //std::cout << "bl:" << bigleft << "\tbr:"<< bigright << std::endl; + mpfr_class f = -(bigleft-bigright); + double x = f.get_d(); + return x; +} + + +double Delta::cdf (double del) { + double pvalue = 1-gsl_cdf_gaussian_P(del, 1.3); + return pvalue; +} + + +std::vector Delta::delta (int l, int r, int o) { + OptimizeShift os(this); + os.setCLR(1,l+r,o); + std::vector resout = os.optimize_shift(); + double out; + if (l > 100 || r > 100 || o > 100) { + out = bigshift(resout[0],resout[1],1,l+r,o); + } else { + out = shift(resout[0],resout[1],1,l+r,o); + } + os.setCLR(1,l,r); + resout = os.optimize_shift(); + double in; + if (l > 100 || r > 100 || o > 100) { + in = bigshift(resout[0],resout[1],1,l,r); + } else { + in = shift(resout[0],resout[1],1,l,r); + } + std::vector ret; + ret.push_back(-(out-in)); + ret.push_back(cdf(-(out-in))); + return ret; +} + + +OptimizeShift::OptimizeShift(Delta * delt):delta(delt),maxiterations(10000),stoppingprecision(0.001),c(0),l(0),r(0) {} + + +void OptimizeShift::setCLR (int ce, int le, int ri) { + c = ce; l = le; r = ri; +} + +double OptimizeShift::GetShift (const gsl_vector * variables) { + double p=gsl_vector_get(variables,0); + double s=gsl_vector_get(variables,1); + double shift; + if (c > 100 || l > 100 || r > 100) { + shift = delta->bigshift(p,s,c,l,r); + } else { + shift = delta->shift(p,s,c,l,r); + } + if (shift == std::numeric_limits::infinity() || isnan(shift)) { + shift = 100000000; + } + return shift; +} + + +double OptimizeShift::GetShift_gsl (const gsl_vector * variables, void *obj) { + double temp; + temp = ((OptimizeShift*)obj)->GetShift(variables); + return temp; +} + + +std::vector OptimizeShift::optimize_shift () { + //need to check the performance on this + const gsl_multimin_fminimizer_type *T = gsl_multimin_fminimizer_nmsimplex2rand; + gsl_multimin_fminimizer *s = NULL; + gsl_vector *ss, *x; + size_t np = 2; + size_t iter = 0; + int status; + double size; + /* Initial vertex size vector */ + ss = gsl_vector_alloc (np); + /* Set all step sizes to .01 */ //Note that it was originally 1 + gsl_vector_set_all (ss, 0.1); + /* Starting point */ + //std::cout<<"Now in OPtimizaRateWithGivenTipVariance in OptimizationFn"< results; + results.push_back(gsl_vector_get(s->x,0)); + results.push_back(gsl_vector_get(s->x,1)); + gsl_vector_free(x); + gsl_vector_free(ss); + gsl_multimin_fminimizer_free (s); + return results; +} diff --git a/src/orphan_files/delta.h b/src/orphan_files/delta.h new file mode 100644 index 0000000..c4ed2ae --- /dev/null +++ b/src/orphan_files/delta.h @@ -0,0 +1,34 @@ +#ifndef _DELTA_H_ +#define _DELTA_H_ + +#include + +#include + +class Delta { +private: + double cdf (double); + +public: + Delta (); + double shift (double p, double s, int c, int l, int r); + double bigshift (double p, double s, int c, int l, int r); + std::vector delta (int l, int r, int o); +}; + +class OptimizeShift { +private: + Delta * delta; + int maxiterations; + double stoppingprecision; + int c, l, r; + double GetShift (const gsl_vector * variables); + static double GetShift_gsl (const gsl_vector * variables, void *obj); + +public: + OptimizeShift (Delta *); + std::vector optimize_shift (); + void setCLR (int ce, int le, int ri); +}; + +#endif /* _DELTA_H_ */ diff --git a/src/orphan_files/distmatrix.cpp b/src/orphan_files/distmatrix.cpp new file mode 100644 index 0000000..1583aec --- /dev/null +++ b/src/orphan_files/distmatrix.cpp @@ -0,0 +1,114 @@ +// NOTE: this file is not presently used + +#include +#include +#include +#include +#include +#include +#include +#include +#include + + +//Calculate the difference between two strings +float CalcSeqDiffs (std::string& sequence1, std::string& sequence2) { + float score = 0; + for (unsigned int i = 0; i < sequence1.size(); i++) { + if (sequence1[i] != sequence2[i]) { + score++; + } + } + return score; +} + +std::map BuildMatrix (std::map& sequences) { + std::vector SequenceName; + std::map Matrix; + std::map::iterator iter; + std::map::iterator iter2; + std::string fasta, SeqName, MatchName; + int count = 0; + int FirstCount = 0; + float MatchScore; + std::vector< std::vector > Score; + for (iter = sequences.begin(); iter != sequences.end(); iter++) { + std::vector row; + for (iter2 = sequences.begin(); iter2 != sequences.end(); iter2++) { + row.push_back(0); + } + Score.push_back(row); + } + for (iter = sequences.begin(); iter != sequences.end(); iter++) { + fasta = iter -> second; + SeqName = iter -> first; + SequenceName.push_back(SeqName); + float count = 0; + int SecondCount = 0; + for (iter2 = sequences.begin(); iter2 != sequences.end(); iter2++) { + MatchScore = CalcSeqDiffs(fasta, iter2 -> second); + MatchName = SeqName + "," + iter2 -> first; + Matrix[MatchName] = MatchScore; + Score[FirstCount][SecondCount] = MatchScore; + SecondCount++; + } + FirstCount++; + + } + std::cout << "\t"; + for (int i = 0; i < SequenceName.size(); i++) { + std::cout << SequenceName[i] << "\t"; + } + std::cout << std::endl; + for (int i = 0; i < Score.size(); i++) { + std::cout << SequenceName[i] << "\t"; + for (int j = 0; j < Score[i].size(); j++) { + std::cout << Score[i][j] << "\t"; + } + std::cout << std::endl; + } + return Matrix; +} + +//Changes the input fasta to one line and returns it +//as a map +map FastaToOneLine (string& fasta) { + + std::map sequences; + std::string line, dna, name_hold; + std::ifstream readline; + float count = 0; + readline.open(fasta.c_str()); + if (readline.is_open()) { + while (getline (readline, line)) { + if (line[0] == '>') { + if (count != 0) { + line.erase (std::remove(line.begin(), line.end(), '>'), line.end()); + sequences[name_hold] = dna; + dna = ""; + } else { + line.erase (std::remove(line.begin(), line.end(), '>'), line.end()); + } + name_hold = line; + } else { + count = 1; + dna += line; + } + } + } + readline.close(); + sequences[name_hold] = dna; + return sequences; +} + +int main() { + std::map sequences; + std::map::iterator iter; + string fasta, Tree; + std::map Matrix; + std::cout << "Calculating Distances" << std::endl; + //std::cin >> fasta; + fasta = ("TestFiles/Real_Test.fa"); + sequences = FastaToOneLine(fasta); + Matrix = BuildMatrix(sequences); +} diff --git a/src/orphan_files/main.cpp b/src/orphan_files/main.cpp new file mode 100644 index 0000000..af87f00 --- /dev/null +++ b/src/orphan_files/main.cpp @@ -0,0 +1,67 @@ +#include +#include +#include +#include +#include + +#include "node.h" +#include "tree_reader.h" +#include "string_node_object.h" +#include "vector_node_object.h" +#include "tree.h" + +int main (int argc, char * argv[]) { + TreeReader tr; + std::string test; + //test = "((a:2,b:2):3,(c:4,d:4):1):1;"; + +/* + std::ifstream infile("../../big_geo/final_ml.tre.cn.rr.pr.nw.pathd8.bgstates.tre"); +*/ + std::ifstream infile(argv[1]); + if (!infile){ + std::cerr << "Could not open file." << std::endl; + return 1; + } + std::vector lines; + std::string line; + while (getline(infile, line)){ + lines.push_back(line); + } + infile.close(); + + test = lines[0]; + + Tree * tree = tr.readTree(test); + std::cout << tree->getNodeCount() << std::endl; +/* std::cout << getNewickString(tree) << std::endl; + std::cout << tree->getRoot()->getNewick(true,"number") << ";" << std::endl; + std::string a = "c"; + tree->pruneExternalNode(tree->getExternalNode(a)); + std::cout << getNewickString(tree) << std::endl; + + StringNodeObject sno("...a node object"); + tree->getRoot()->assocObject("test",sno); + std::cout << tree->getRoot()->getNewick(true,"test") << ";" << std::endl; + + std::cout << *((StringNodeObject*) (tree->getRoot()->getObject("test"))) << std::endl; + + VectorNodeObject vno; + vno.push_back(1);vno.push_back(2); + tree->getRoot()->assocObject("testvno",vno); + + std::cout << ((VectorNodeObject *) (tree->getRoot()->getObject("testvno")))->at(0) << std::endl; + + a = "b"; + tree->setHeightFromRootToNodes(); + std::cout << tree->getExternalNode(a)->getHeight() << std::endl; + std::cout << tree->getRoot()->getHeight() << std::endl; + std::cout << tree->getInternalNode(0)->getHeight() << std::endl; + std::cout << tree->getInternalNode(1)->getHeight() << std::endl; + //for(int i=0;igetInternalNodeCount();i++){ + //cout << tree->getInternalNode(i).getBL() << std::endl; + //} + */ + delete tree; + return EXIT_SUCCESS; +} diff --git a/src/orphan_files/main_bpseq.cpp b/src/orphan_files/main_bpseq.cpp new file mode 100644 index 0000000..5ec4ce3 --- /dev/null +++ b/src/orphan_files/main_bpseq.cpp @@ -0,0 +1,368 @@ +// this is commented out of the Makefile. is it deprecated? +#include +#include +#include +#include +#include +#include +#include +#include + +#include "tree.h" +#include "tree_reader.h" +#include "sequence.h" +#include "seq_reader.h" +#include "utils.h" +#include "log.h" + +void print_help() { + std::cout << "This will print out partitions found in seqfile." << std::endl; + std::cout << "Currently only supports DNA alignments. << std::endl"; + std::cout << "Can read from stdin or file." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxbpsq [OPTION]... [FILE]..." << std::endl; + std::cout << std::endl; + std::cout << " -s, --seqf=FILE input sequence file, stdin otherwise" << std::endl; + std::cout << " -t, --treef=FILE input tree file, stdin otherwise" << std::endl; + std::cout << " -o, --outf=FILE output file, stout otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} +/* + * add you name if you contribute (probably add another line) + */ +std::string versionline("pxbpsq 0.1\nCopyright (C) 2014 FePhyFoFum\nLicense GPLv3\nwritten by Stephen A. Smith (blackrim), Joseph W. Brown"); + +static struct option const long_options[] = +{ + {"seqf", required_argument, NULL, 's'}, + {"treef", required_argument, NULL, 't'}, + {"outf", required_argument, NULL, 'o'}, + {"help", no_argument, NULL, 'h'}, + {"version", no_argument, NULL, 'V'}, + {NULL, 0, NULL, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool fileset = false; + bool tfileset = false; + bool outfileset = false; + bool conditional = false; // not used + char * seqf = NULL; + char * treef = NULL; + char * outf = NULL; + while (1) { + int oi = -1; + int c = getopt_long(argc, argv, "s:t:o:hV", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + fileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 't': + tfileset = true; + conditional = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << versionline << std::endl; + exit(0); + default: + print_error(argv[0], (char)c); + exit(0); + } + } + + std::istream * pios = NULL; + std::istream * piost = NULL; + std::ostream * poos = NULL; + std::ifstream * fstr = NULL; + std::ofstream * ofstr = NULL; + std::ifstream * tfstr = NULL; + + if (fileset == true) { + fstr = new std::ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (check_for_input_to_stream() == false) { + print_help(); + exit(1); + } + } + if (outfileset == true) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + // if treefile there, read the trees + // then we will calculate the conditional biparts as well + std::vector trees; + if (tfileset == true) { + tfstr = new std::ifstream(treef); + piost = tfstr; + TreeReader tr; + std::string retstring; + while (getline(*piost,retstring)) { + trees.push_back(tr.readTree(retstring)); + } + int numtrees = trees.size(); + if (numtrees == 0) { + std::cout << "there are no trees;" << std::endl; + } + } + + // read the sequences + std::vector seqs; + Sequence seq; + std::string retstring; + + int ft = test_seq_filetype_stream(*pios,retstring); + while (read_next_seq_from_stream(*pios,ft,retstring,seq)) { + seqs.push_back(seq); + } + // fasta has a trailing one + if (ft == 2) { + seqs.push_back(seq); + } + + // get the biparts for the trees + std::vector names; + std::map name_index; + std::map name_st_index; + for (unsigned int i=0; i < seqs.size(); i++) { + std::string tname = seqs[i].get_id(); + name_index[tname] = i; + (*poos) << tname << " " << i << std::endl; + names.push_back(tname); + name_st_index[i] = tname; + } + int numseqs = seqs.size(); + int numcols = seqs[0].get_sequence().size(); + + // hardcoded for DNA + // can try to get more elegant later + std::vector > > all_bp; + std::vector bp_count; + std::vector seq_bipart_map; + // for each column + for (int i=0; i < numcols; i++) { + std::vector tbpa; + std::vector tbpc; + std::vector tbpg; + std::vector tbpt; + int skip = 0; + for (int j=0; j < numseqs; j++) { + if (seqs[j].get_sequence()[i] == 'A') { + tbpa.push_back(j); + } else if (seqs[j].get_sequence()[i] == 'C') { + tbpc.push_back(j); + } else if (seqs[j].get_sequence()[i] == 'G') { + tbpg.push_back(j); + } else if (seqs[j].get_sequence()[i] == 'T') { + tbpt.push_back(j); + } else { + std::cout << "don't recognize character " << seqs[j].get_sequence()[i] << std::endl; + skip += 1; + } + } + if (skip == numseqs) { + continue; + } + sort(tbpa.begin(),tbpa.end()); + sort(tbpc.begin(),tbpc.end()); + sort(tbpg.begin(),tbpg.end()); + sort(tbpt.begin(),tbpt.end()); + std::vector > tallbp; + tallbp.push_back(tbpa); + tallbp.push_back(tbpc); + tallbp.push_back(tbpg); + tallbp.push_back(tbpt); + // check to see if the bipart is new + bool add = true; + for (unsigned int j=0; j < all_bp.size(); j++) { // for each bipart set + bool got = true; + for (unsigned int k=0; k < tallbp.size(); k++) { // or each nucleotide set + //bool tm = true; not used + if ((int)count(all_bp[j].begin(),all_bp[j].end(),tallbp[k]) == 0) { // no match + //tm = false; + got = false; + break; + } + } + if (got == true) { // we have a match + bp_count[j] += 1; + seq_bipart_map.push_back(j); + add = false; + break; + } + } + if (add == true) { + all_bp.push_back(tallbp); + bp_count.push_back(1); + seq_bipart_map.push_back(bp_count.size()-1); + } + } + + (*poos) << numseqs << " sequences with " << numcols << " cols" << std::endl; + (*poos) << all_bp.size() << " unique parts found" << std::endl; + + // calculate the ICA + // get the parts that are not compatible + // this would be an intersection of each of the parts and if one is null then it is compatible + double ACA = 0; + std::vector bp_ica(bp_count.size()); + for (unsigned int i=0; i < all_bp.size(); i++) { + double totalcount = bp_count[i]; + std::vector conflict_nums; + conflict_nums.push_back(bp_count[i]); + std::vector conflicts; + for (unsigned int j=0; j < all_bp.size(); j++) { + if (i == j) { + continue; + } + bool good = true; + int compcount = 0; + for (unsigned int m=0; m < all_bp[i].size(); m++) { + if (all_bp[i][m].size() <= 1) { + continue; + } else { + compcount += 1; + } + int badcount = 0; + int compcount2 = 0; + for (unsigned int n=0; n < all_bp[i].size(); n++) { + if (all_bp[j][n].size() <= 1) { + continue; + } + compcount2 += 1; + // intersection of [i][m] and [j][n] + std::vector v3; + set_intersection(all_bp[i][m].begin(),all_bp[i][m].end(),all_bp[j][n].begin(),all_bp[j][n].end(),back_inserter(v3)); + if (v3.size() > 0 && v3.size() < all_bp[j][n].size() && v3.size() < all_bp[i][m].size()) { + badcount += 1; + } + } + if (badcount >= 2 && compcount > 1 && compcount2 > 1) { + good = false; + break; + } + } + if (good == false) { + conflicts.push_back(j); + conflict_nums.push_back(bp_count[j]); + totalcount += bp_count[j]; + // std::cout << i << " ("< conflict_nums[0]) { + sign = -1; + } + } + double ICA = 1; // same as logn(conflict_nums.size(),conflict_nums.size()); + for (unsigned int j=0; j < conflict_nums.size(); j++) { + ICA += (conflict_nums[j]*logn(conflict_nums[j],conflict_nums.size())); + } + ACA += ICA; + ICA *= sign; + bp_ica[i] = ICA; + (*poos) << i <<" (" << bp_count[i] << ")\t" << ICA << " " << get_string_vector(all_bp[i][0]) << " | " << get_string_vector(all_bp[i][1]) << " | " << get_string_vector(all_bp[i][2]) << " | " << get_string_vector(all_bp[i][3]) << std::endl; + } + (*poos) << " " << ACA << std::endl; + + //std::cout << get_string_vector(seq_bipart_map) << std::endl; + + // tree processing + if (tfileset) { + for (unsigned int t=0; t < trees.size(); t++) { + std::vector rt_nms = trees[t]->getRoot()->get_leave_names(); + std::set rt_nms_set; + copy(rt_nms.begin(),rt_nms.end(),inserter(rt_nms_set,rt_nms_set.begin())); + for (int j=0; j < trees[t]->getInternalNodeCount(); j++) { + std::vector nms = trees[t]->getInternalNode(j)->get_leave_names(); + (*poos) << get_string_vector(nms) << std::endl; + std::vector nms_i; + std::set nms_s; + copy(nms.begin(),nms.end(),inserter(nms_s,nms_s.begin())); + for (unsigned int k=0; k < nms.size(); k++) { + nms_i.push_back(name_index[nms[k]]); + } + sort(nms_i.begin(),nms_i.end()); + // get the other side of the bipart + std::vector nms_i2; + std::vector nms_s2(rt_nms.size()); + std::vector::iterator it; + it = set_difference(rt_nms_set.begin(),rt_nms_set.end(),nms_s.begin(),nms_s.end(),nms_s2.begin()); + nms_s2.resize(it-nms_s2.begin()); + for (unsigned int k=0; k < nms_s2.size(); k++) { + nms_i2.push_back(name_index[nms_s2[k]]); + } + // find the biparts that are the same + std::vector matches; + for (unsigned int i=0; i < all_bp.size(); i++) { + for (unsigned int m=0; m < all_bp[i].size(); m++) { + if (all_bp[i][m].size() <= 1 || (all_bp[i][m].size() != nms_i.size() && all_bp[i][m].size() != nms_i2.size() ) ) { + continue; + } + std::vector v3; + std::set_intersection(all_bp[i][m].begin(),all_bp[i][m].end(),nms_i.begin(),nms_i.end(),back_inserter(v3)); + if (v3.size() == nms_i.size()) { + (*poos) << i << " (" << bp_ica[i] << ") "; + break; + } + std::vector v4; + std::set_intersection(all_bp[i][m].begin(),all_bp[i][m].end(),nms_i2.begin(),nms_i2.end(),back_inserter(v4)); + if (v4.size() == nms_i2.size()) { + (*poos) << i << " (" << bp_ica[i] << ") "; + break; + } + } //each part of the bipart + } //each bipart + (*poos) << std::endl; + } //each internal node + } //each tree + tfstr->close(); + delete piost; + } + + //shut things down + if (fileset) { + fstr->close(); + delete pios; + } + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/orphan_files/main_contbl.cpp b/src/orphan_files/main_contbl.cpp new file mode 100644 index 0000000..f5b9253 --- /dev/null +++ b/src/orphan_files/main_contbl.cpp @@ -0,0 +1,196 @@ +// this appears nowhere in the Makefile. was it replaced by contrates? + +#include +#include +#include +#include +#include +#include +#include + +#include "utils.h" +#include "sequence.h" +#include "seq_reader.h" +#include "tree_reader.h" +#include "tree.h" +#include "cont_models.h" +#include "optimize_cont_models_nlopt.h" +#include "log.h" + +void print_help() { + std::cout << "Continuous character branch length estimation with Brownian." << std::endl; + std::cout << "This will take fasta, phylip (and soon nexus) inputs." << std::endl; + std::cout << "Can read from stdin or file." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxcontrates [OPTION]... " << std::endl; + std::cout << std::endl; + std::cout << " -c, --charf=FILE input character file, stdin otherwise" << std::endl; + std::cout << " -t, --treef=FILE input tree file, stdin otherwise" << std::endl; + std::cout << " -o, --outf=FILE output sequence file, stout otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +string versionline("pxcontbl 0.1\nCopyright (C) 2017 FePhyFoFum\nLicense GPLv3\nwritten by Stephen A. Smith (blackrim)"); + +static struct option const long_options[] = +{ + {"char", required_argument, NULL, 'c'}, + {"tree", required_argument, NULL, 't'}, + {"outf", required_argument, NULL, 'o'}, + {"help", no_argument, NULL, 'h'}, + {"version", no_argument, NULL, 'V'}, + {NULL, 0, NULL, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool cfileset = false; + bool tfileset = false; + bool outfileset = false; + + char * treef = NULL; + char * charf = NULL; + char * outf = NULL; + int analysis = 0; + while (1) { + int oi = -1; + int c = getopt_long(argc, argv, "c:t:o:hV", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 'c': + cfileset = true; + charf = strdup(optarg); + check_file_exists(charf); + break; + case 't': + tfileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << versionline << std::endl; + exit(0); + default: + print_error(argv[0], (char)c); + exit(0); + } + } + + std::istream * pios = NULL; + std::istream * poos = NULL; + std::ifstream * cfstr = NULL; + std::ifstream * tfstr = NULL; + + std::ostream * poouts = NULL; + std::ofstream * ofstr = NULL; + + + if (tfileset == true) { + tfstr = new ifstream(treef); + poos = tfstr; + } else { + poos = &std::cin; + } + + if (cfileset == true) { + cfstr = new std::ifstream(charf); + pios = cfstr; + } else { + std::cout << "you have to set a character file. Only a tree file can be read in through the stream;" << std::endl; + } + + //out file + // + if (outfileset == true){ + ofstr = new std::ofstream(outf); + poouts = ofstr; + } else{ + poouts = &std::cout; + } + // + + std::string retstring; + int ft = test_char_filetype_stream(*pios, retstring); + if (ft != 1 && ft != 2) { + std::cout << "only fasta and phylip (with spaces) supported so far" << std::endl; + exit(0); + } + Sequence seq; + std::vector seqs; + std::map seq_map; + int y = 0; + int nchars = 0 ; + while (read_next_seq_char_from_stream(*pios, ft, retstring, seq)) { + seqs.push_back(seq); + nchars = seq.get_num_cont_char(); + seq_map[seq.get_id()] = y; + seq.clear_cont_char(); + y++; + } + std::cout << "nchars: " << nchars << std::endl; + + if (ft == 2) { + seqs.push_back(seq); + seq_map[seq.get_id()] = y; + seq.clear_cont_char(); + } + //read trees + TreeReader tr; + std::vector trees; + while (getline(*poos,retstring)) { + if (retstring.size()<4){ + continue; + } + trees.push_back(tr.readTree(retstring)); + } + int x = 0; + //conduct analyses for each character + for (int i=0; i < trees[x]->getExternalNodeCount(); i++) { + std::vector tv (nchars); + for (int c=0; c < nchars; c++) { + tv[c] = seqs[seq_map[trees[x]->getExternalNode(i)->getName()]].get_cont_char(c); + } + trees[x]->getExternalNode(i)->assocDoubleVector("val",tv); + } + for (int i=0; i < trees[x]->getInternalNodeCount(); i++) { + std::vector tv (nchars); + for (int c=0; c < nchars; c++) { + tv[c] = 0; + } + trees[x]->getInternalNode(i)->assocDoubleVector("val",tv); + } + float sigma = 1; + std::cout << calc_bm_prune(trees[x], sigma) << std::endl; + optimize_single_rate_bm_bl(trees[x]); + (*poouts) << trees[x]->getRoot()->getNewick(true) << ";" << std::endl; + std::cout << calc_bm_prune(trees[x], sigma) << std::endl; + + if (cfileset) { + cfstr->close(); + delete pios; + } + if (tfileset) { + tfstr->close(); + delete poos; + } + if (outfileset) { + ofstr->close(); + delete poouts; + } + return EXIT_SUCCESS; +} diff --git a/src/orphan_files/main_delta.cpp b/src/orphan_files/main_delta.cpp new file mode 100644 index 0000000..7dac1be --- /dev/null +++ b/src/orphan_files/main_delta.cpp @@ -0,0 +1,78 @@ +// this is not present in the Makefile + + +#include +#include +#include +#include +#include + +#include "node.h" +#include "tree_reader.h" +#include "string_node_object.h" +#include "vector_node_object.h" +#include "tree.h" +#include "utils.h" +#include "delta.h" +#include "log.h" + +#include "omp.h" + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + TreeReader tr; + + if (argc != 4 && argc != 3) { + std::cout << "usage: phyx_delta l r o" << std::endl; + std::cout << " OR" << std::endl; + std::cout << "usage: phyx_delta newickfile outfile" << std::endl; + exit(0); + } + if (argc == 4) { + Delta delta; + vector nums = delta.delta(atoi(argv[1]), atoi(argv[2]), atoi(argv[3])); + std::cout << nums[0] << " " << nums[1] << std::endl; + } + if (argc == 3) { + TreeReader tr; + Tree * tree; + ifstream ifs( argv[1] ); + std::string temp; + int count = 1; + while ( getline( ifs, temp ) ) { + if (temp.size() > 1) { + tree = tr.readTree(temp); + std::cout << "Tree "<< count <<" has " << tree->getExternalNodeCount() + << " leaves." << std::endl; + //ret.push_back(intree); + count++; + } + } + //moving through the tree + + Delta delta; + #pragma omp parallel for ordered num_threads(4) + for (int i=0; i < tree->getInternalNodeCount(); i++) { + if (tree->getInternalNode(i)->get_num_leaves() > 1 + && tree->getInternalNode(i)->isRoot() == false + && tree->getInternalNode(i)->getChildCount() == 2) { + int left = tree->getInternalNode(i)->getChild(0)->get_num_leaves(); + int right = tree->getInternalNode(i)->getChild(1)->get_num_leaves(); + int out = tree->getInternalNode(i)->getParent()->get_num_leaves()-(left+right); + std::vector nums = delta.delta(left, right, out); + std::cout << "left:" << left << " right:" << right << " out:" + << out << " delta:" << nums[0] << " p:" << nums[1] << std::endl; + std::stringstream sout; + sout << nums[1]; + tree->getInternalNode(i)->setName(sout.str()); + } + } + ofstream outTreeFile; + outTreeFile.open(argv[2],ios::app ); + outTreeFile << tree->getRoot()->getNewick(true) << ";" << std::endl; + outTreeFile.close(); + } + return EXIT_SUCCESS; +} diff --git a/src/orphan_files/main_kaks.cpp b/src/orphan_files/main_kaks.cpp new file mode 100644 index 0000000..31a8b67 --- /dev/null +++ b/src/orphan_files/main_kaks.cpp @@ -0,0 +1,100 @@ +// this is essentially empty + +#include +#include +#include +#include +#include +#include + +#include "log.h" + +void print_help() { + std::cout << "Basic Positive selection test" << std::endl; + std::cout << "This will take fasta, fastq, phylip, and nexus inputs." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxkaks [OPTION]... " << std::endl; + std::cout << std::endl; + std::cout << " -i, --inputf=FILE name of codon aligned fasta, stdin otherwise" << std::endl; + std::cout << " -o, --outf=FILE name of output file, stout otherwise" << std::endl; + std::cout << " --help display this help and exit" << std::endl; + std::cout << " --version display version and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string versionline("pxkaks 0.1\nCopyright (C) 2016 FePhyFoFum\nLicense GPLv3\nwritten by Joseph F. Walker, Joseph W. Brown, Stephen A. Smith (blackrim)"); + +static struct option const long_options[] = +{ + {"inputf", required_argument, NULL, 'i'}, + {"outf", required_argument, NULL, 'o'}, + {"help", no_argument, NULL, 'h'}, + {"version", no_argument, NULL, 'V'}, + {NULL, 0, NULL, 0} +}; + +int main(int argc, char * argv[]){ + + log_call(argc, argv); + + bool outfileset = false; + bool fileset = false; + char * outf = NULL; + char * seqf = NULL; + while (1) { + int oi = -1; + int c = getopt_long(argc, argv, "i:o:hV", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 'i': + fileset = true; + seqf = strdup(optarg); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << versionline << std::endl; + exit(0); + default: + std::cout << "Error in input try -h" << std::endl; + exit(0); + } + } + + if (fileset && outfileset) { + check_inout_streams_identical(seqf, outf); + } + + std::istream * pios = NULL; + std::ostream * poos = NULL; + std::ifstream * fstr = NULL; + std::ofstream * ofstr = NULL; + + if (outfileset == true) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + if (fileset == true) { + fstr = new ifstream(seqf); + pios = fstr; + } else { + pios = &std::cin; + if (check_for_input_to_stream() == false) { + print_help(); + exit(1); + } + } + + return EXIT_SUCCESS; +} diff --git a/src/orphan_files/main_medusa.cpp b/src/orphan_files/main_medusa.cpp new file mode 100644 index 0000000..1053572 --- /dev/null +++ b/src/orphan_files/main_medusa.cpp @@ -0,0 +1,141 @@ +#include +#include +#include +#include +#include +#include +#include +#include + +#include "tree_reader.h" +#include "tree.h" +#include "tree_utils.h" +#include "utils.h" +#include "bd_fit.h" +#include "log.h" + +void print_help () { + std::cout << "Piecewise birth-death inference using AIC" << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxbdfit [OPTION]... " << std::endl; + std::cout << std::endl; + std::cout << " -t, --treef=FILE input treefile, stdin otherwise" << std::endl; + std::cout << " -m, --model=STRING diversification model; either 'yule' or 'bd' (default)" << std::endl; + std::cout << " -o, --outf=FILE output file, stout otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +std::string versionline("pxbdfit 0.1\nCopyright (C) 2017 FePhyFoFum\nLicense GPLv3\nwritten by Joseph W. Brown, Stephen A. Smith (blackrim)"); + +static struct option const long_options[] = +{ + {"treef", required_argument, NULL, 't'}, + {"model", required_argument, NULL, 'm'}, + {"outf", required_argument, NULL, 'o'}, + {"showd", no_argument, NULL, 's'}, + {"help", no_argument, NULL, 'h'}, + {"version", no_argument, NULL, 'V'}, + {NULL, 0, NULL, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool tfileset = false; + + char * treef = NULL; + char * outf = NULL; + + std::string model = "bd"; + + while (1) { + int oi = -1; + int c = getopt_long(argc, argv, "t:m:o:x:hV", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + tfileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'm': + // need to check valid models here + model = strdup(optarg); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << versionline << std::endl; + exit(0); + default: + print_error(argv[0], (char)c); + exit(0); + } + } + + std::istream* pios = NULL; + std::ostream* poos = NULL; + std::ifstream* fstr = NULL; + std::ofstream* ofstr = NULL; + + if (outfileset == true) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + if (tfileset == true) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &std::cin; + if (check_for_input_to_stream() == false) { + print_help(); + exit(1); + } + } + + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + cerr << "this really only works with nexus or newick" << std::endl; + exit(0); + } + + bool going = true; + Tree * tree; + while (going) { + tree = read_next_tree_from_stream_newick (*pios, retstring, &going); + if (going) { + // in addition to checking ultramtericity, the following sets node heights + //if (is_ultrametric_postorder(tree)) { + if (is_ultrametric_paths(tree)) { + BDFit bd(tree, model); + bd.get_pars(poos); + delete tree; + } else { + std::cout << "Tree is not ultrametric. Exiting." << std::endl; + exit(0); + } + } + } + + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/orphan_files/main_seq_test.cpp b/src/orphan_files/main_seq_test.cpp new file mode 100644 index 0000000..f522785 --- /dev/null +++ b/src/orphan_files/main_seq_test.cpp @@ -0,0 +1,17 @@ +#include +#include +#include + +#include "utils.h" +#include "seq_reader.h" + +int main(int argc, char * argv[]) { + + if (argc > 2 || argc == 1) { + std::cout << "usage: pxseqtest file" << std::endl; + exit(0); + } + + std::cout << test_seq_filetype(argv[1]) << std::endl; + return EXIT_SUCCESS; +} diff --git a/src/orphan_files/main_sm0.cpp b/src/orphan_files/main_sm0.cpp new file mode 100644 index 0000000..30d3822 --- /dev/null +++ b/src/orphan_files/main_sm0.cpp @@ -0,0 +1,191 @@ +// this does not appear in the Makefile + +#include +#include +#include +#include +#include +#include + +using namespace std; + +#include "rate_model.h" +#include "tree.h" +#include "tree_reader.h" +#include "state_reconstructor_simple.h" +#include "seq_reader.h" +#include "sequence.h" +#include "seq_utils.h" +#include "utils.h" +#include "mcmc.h" +#include "log.h" + +#include +using namespace arma; + +void print_help() { + cout << "Calculate Selection Model 0 with K and w with seqs and tree." << endl; + cout << "Can read from stdin or file." << endl; + cout << endl; + cout << "Usage: pxsm0 [OPTION]... [FILE]..." << endl; + cout << endl; + cout << " -s, --seqf=FILE input sequence file" <" << endl; + cout << "phyx home page: " << endl; +} + +string versionline("pxsm0 0.1\nCopyright (C) 2014 FePhyFoFum\nLicense GPLv3\nwritten by Stephen A. Smith (blackrim)"); + +static struct option const long_options[] = +{ + {"seqf", required_argument, NULL, 's'}, + {"treef", required_argument, NULL, 't'}, + {"outf", required_argument, NULL, 'o'}, + {"help", no_argument, NULL, 'h'}, + {"version", no_argument, NULL, 'V'}, + {NULL, 0, NULL, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool sfileset = false; + bool tfileset = false; + bool outfileset = false; + char * seqf = NULL; + char * treef = NULL; + char * outf = NULL; + while (1) { + int oi = -1; + int c = getopt_long(argc, argv, "s:t:o:hV", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + sfileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 't': + tfileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + cout << versionline << endl; + exit(0); + default: + print_error(argv[0],(char)c); + exit(0); + } + } + + istream * spios = NULL; + istream * tpios = NULL; + ostream * poos = NULL; + ifstream * sfstr = NULL; + ifstream * tfstr = NULL; + ofstream * ofstr = NULL; + + if (sfileset == true) { + sfstr = new ifstream(seqf); + spios = sfstr; + } + if (tfileset == true) { + tfstr = new ifstream(treef); + tpios = tfstr; + } + if (tfileset == false || sfileset == false) { + cout << "you have to set the tree and seq files" << endl; + exit(0); + } + if (outfileset == true) { + ofstr = new ofstream(outf); + poos = ofstr; + } else { + poos = &cout; + } + //read seqs + vector seqs; + vector sr_seqs; + Sequence seq; + string retstring; + int ft = test_seq_filetype_stream(*spios,retstring); + while (read_next_seq_from_stream(*spios,ft,retstring,seq)) { + (*poos) << seq.get_fasta(); + seqs.push_back(seq); + Sequence tseq(seq.get_id(),""); + sr_seqs.push_back(tseq); + } + if (ft == 2) { + (*poos) << seq.get_fasta(); + seqs.push_back(seq); + Sequence tseq(seq.get_id(),""); + sr_seqs.push_back(tseq); + } + + + //read trees + ft = test_tree_filetype_stream(*tpios, retstring); + if (ft != 1) { + cerr << "this really only works with newick" << endl; + exit(0); + } + bool going = true; + Tree * tree; + if (ft == 1) { + while (going) { + tree = read_next_tree_from_stream_newick(*tpios, retstring, &going); + break; + } + } + + map codon_dict; + vector codon_list; + map > codon_pos; + populate_codon_list(&codon_list); + populate_map_codon_dict(&codon_dict); + populate_map_codon_indices(&codon_pos); + + mat bf(61,61); + mat K(61,61); + mat w(61,61); + mat inq(61,61); + generate_bigpibf_K_w(&bf,&K,&w,codon_dict,codon_pos,codon_list); + update_simple_goldman_yang_q(&inq,1.0,1.0,bf,K,w); +// cout << inq << endl; + + RateModel rm(61); + rm.set_Q(inq); +// cout << rm.get_Q() << endl; + int sites = (seqs[0].get_sequence().size()/3); + StateReconstructorSimple sr(rm,sites); + sr.set_tree(tree); + cout << "there are " << sites << " sites" << endl; + sm0_mcmc(375,10,tree,sr,rm,seqs,sr_seqs,codon_pos,bf,K,w,inq); + + sfstr->close(); + delete spios; + tfstr->close(); + delete tpios; + + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/orphan_files/main_sm2a.cpp b/src/orphan_files/main_sm2a.cpp new file mode 100644 index 0000000..0c990be --- /dev/null +++ b/src/orphan_files/main_sm2a.cpp @@ -0,0 +1,198 @@ +// this does not appear in the Makefile + +#include +#include +#include +#include +#include +#include + +using namespace std; + +#include "rate_model.h" +#include "tree.h" +#include "tree_reader.h" +#include "state_reconstructor_simple.h" +#include "seq_reader.h" +#include "sequence.h" +#include "seq_utils.h" +#include "utils.h" +#include "mcmc.h" +#include "log.h" + +#include +using namespace arma; + +void print_help() { + cout << "Calculate Selection Model 0 with K and w with seqs and tree." << endl; + cout << "Can read from stdin or file." << endl; + cout << endl; + cout << "Usage: pxsm2a [OPTION]... [FILE]..." << endl; + cout << endl; + cout << " -s, --seqf=FILE input sequence file" << endl; + cout << " -t, --treef=FILE input tree file" << endl; + cout << " -o, --outf=FILE output sequence file, stout otherwise" << endl; + cout << " -h, --help display this help and exit" << endl; + cout << " -V, --version display version and exit" << endl; + cout << endl; + cout << "Report bugs to: " << endl; + cout << "phyx home page: " << endl; +} + +string versionline("pxsm2a 0.1\nCopyright (C) 2014 FePhyFoFum\nLicense GPLv3\nwritten by Stephen A. Smith (blackrim)"); + +static struct option const long_options[] = +{ + {"seqf", required_argument, NULL, 's'}, + {"treef", required_argument, NULL, 't'}, + {"outf", required_argument, NULL, 'o'}, + {"help", no_argument, NULL, 'h'}, + {"version", no_argument, NULL, 'V'}, + {NULL, 0, NULL, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool sfileset = false; + bool tfileset = false; + bool outfileset = false; + char * seqf = NULL; + char * treef = NULL; + char * outf = NULL; + while (1) { + int oi = -1; + int c = getopt_long(argc, argv, "s:t:o:hV", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 's': + sfileset = true; + seqf = strdup(optarg); + check_file_exists(seqf); + break; + case 't': + tfileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + cout << versionline << endl; + exit(0); + default: + print_error(argv[0], (char)c); + exit(0); + } + } + istream * spios = NULL; + istream * tpios = NULL; + ostream * poos = NULL; + ifstream * sfstr = NULL; + ifstream * tfstr = NULL; + ofstream * ofstr = NULL; + + if (sfileset == true) { + sfstr = new ifstream(seqf); + spios = sfstr; + } + if (tfileset == true) { + tfstr = new ifstream(treef); + tpios = tfstr; + } + if (tfileset == false || sfileset == false) { + cout << "you have to set the tree and seq files" << endl; + exit(0); + } + if (outfileset == true) { + ofstr = new ofstream(outf); + poos = ofstr; + } else { + poos = &cout; + } + //read seqs + vector seqs; + vector sr_seqs; + Sequence seq; + string retstring; + int ft = test_seq_filetype_stream(*spios,retstring); + while (read_next_seq_from_stream(*spios,ft,retstring,seq)) { + (*poos) << seq.get_fasta(); + seqs.push_back(seq); + Sequence tseq(seq.get_id(),""); + sr_seqs.push_back(tseq); + } + if (ft == 2) { + (*poos) << seq.get_fasta(); + seqs.push_back(seq); + Sequence tseq(seq.get_id(),""); + sr_seqs.push_back(tseq); + } + + //read trees + ft = test_tree_filetype_stream(*tpios, retstring); + if (ft != 1) { + cerr << "this really only works with newick" << endl; + exit(0); + } + bool going = true; + Tree * tree; + if (ft == 1) { + while (going) { + tree = read_next_tree_from_stream_newick(*tpios, retstring, &going); + break; + } + } + + map codon_dict; + vector codon_list; + map > codon_pos; + populate_codon_list(&codon_list); + populate_map_codon_dict(&codon_dict); + populate_map_codon_indices(&codon_pos); + + mat bf(61,61); + mat K(61,61); + mat w(61,61); + mat inq0(61,61); + mat inq1(61,61); + mat inq2(61,61); + generate_bigpibf_K_w(&bf,&K,&w,codon_dict,codon_pos,codon_list); + update_simple_goldman_yang_q(&inq0,1.36714,0.001,bf,K,w); + update_simple_goldman_yang_q(&inq1,1.36714,1.0,bf,K,w); + update_simple_goldman_yang_q(&inq2,1.36714,8.21486,bf,K,w); +// cout << inq << endl; + + RateModel rm(61); + rm.selection_model = 2; + rm.set_n_qs(3); + rm.set_Q_which(inq0,0); + rm.set_Q_which(inq1,1); + rm.set_Q_which(inq2,2); + //rm.set_Q(inq); +// cout << rm.get_Q() << endl; + int sites = (seqs[0].get_sequence().size()/3); + StateReconstructorSimple sr(rm,sites); + sr.set_tree(tree); + cout << "there are " << sites << " sites" << endl; + sm2a_mcmc(0,10,tree,sr,rm,seqs,sr_seqs,codon_pos,bf,K,w,inq0,inq1,inq2); + + sfstr->close(); + delete spios; + tfstr->close(); + delete tpios; + + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/orphan_files/main_tdist.cpp b/src/orphan_files/main_tdist.cpp new file mode 100644 index 0000000..284572c --- /dev/null +++ b/src/orphan_files/main_tdist.cpp @@ -0,0 +1,169 @@ +// this does not appear in the Makefile + +#include +#include +#include +#include +#include +#include +#include +#include + +using namespace std; + +#include "tree_reader.h" +#include "tree.h" +#include "tree_utils.h" +#include "utils.h" +#include "bd_fit.h" +#include "log.h" + +// altering bd code. doesn't currently do anything! + +/* +Give two options: +1. pass in 2 trees +2. pass in 1 distribution of trees + */ + +void print_help () { + std::cout << "Calculate tree distances. RF to begin with, others to follow" << std::endl; + std::cout << "Either pass in 2 trees with `t` and `a`, or a single distribution with `t`." << std::endl; + std::cout << std::endl; + std::cout << "Usage: pxtdist [OPTION]... " << std::endl; + std::cout << std::endl; + std::cout << " -t, --treef=FILE reference treefile, stdin otherwise" << std::endl; + std::cout << " -a, --alttree=FILE alternate treefile" << std::endl; + std::cout << " -d, --dist=STRING distance metric, default='RF'" << std::endl; + std::cout << " -o, --outf=FILE output file, stout otherwise" << std::endl; + std::cout << " -h, --help display this help and exit" << std::endl; + std::cout << " -V, --version display version and exit" << std::endl; + std::cout << std::endl; + std::cout << "Report bugs to: " << std::endl; + std::cout << "phyx home page: " << std::endl; +} + +string versionline("pxtdist 0.1\nCopyright (C) 2016 FePhyFoFum\nLicense GPLv3\nwritten by Joseph W. Brown, Stephen A. Smith (blackrim)"); + +static struct option const long_options[] = +{ + {"treef", required_argument, NULL, 't'}, + {"alttree", required_argument, NULL, 'a'}, + {"dist", required_argument, NULL, 'd'}, + {"outf", required_argument, NULL, 'o'}, + {"showd", no_argument, NULL, 's'}, + {"help", no_argument, NULL, 'h'}, + {"version", no_argument, NULL, 'V'}, + {NULL, 0, NULL, 0} +}; + +int main(int argc, char * argv[]) { + + log_call(argc, argv); + + bool outfileset = false; + bool tfileset = false; + bool alttfileset = false; + + char * treef = NULL; + char * alttreef = NULL; + char * outf = NULL; + + std::string dist = "bd"; + + while (1) { + int oi = -1; + int c = getopt_long(argc, argv, "t:a:d:o:x:hV", long_options, &oi); + if (c == -1) { + break; + } + switch(c) { + case 't': + tfileset = true; + treef = strdup(optarg); + check_file_exists(treef); + break; + case 'a': + alttfileset = true; + alttreef = strdup(optarg); + check_file_exists(alttreef); + break; + case 'd': + dist = strdup(optarg); + break; + case 'o': + outfileset = true; + outf = strdup(optarg); + break; + case 'h': + print_help(); + exit(0); + case 'V': + std::cout << versionline << std::endl; + exit(0); + default: + print_error(argv[0], (char)c); + exit(0); + } + } + + if (tfileset && outfileset) { + check_inout_streams_identical(treef, outf); + } + if (alttfileset && outfileset) { + check_inout_streams_identical(alttreef, outf); + } + + std::istream * pios = NULL; + std::ostream * poos = NULL; + std::ifstream * fstr = NULL; + std::ofstream * ofstr = NULL; + + if (outfileset == true) { + ofstr = new std::ofstream(outf); + poos = ofstr; + } else { + poos = &std::cout; + } + if (tfileset == true) { + fstr = new std::ifstream(treef); + pios = fstr; + } else { + pios = &cin; + if (check_for_input_to_stream() == false) { + print_help(); + exit(1); + } + } + + std::string retstring; + int ft = test_tree_filetype_stream(*pios, retstring); + if (ft != 0 && ft != 1) { + cerr << "this really only works with nexus or newick" << std::endl; + exit(0); + } + + bool going = true; + Tree * tree; + while (going) { + tree = read_next_tree_from_stream_newick (*pios, retstring, &going); + if (going) { + // in addition to checking ultramtericity, the following sets node heights + //if (is_ultrametric_postorder(tree)) { + if (is_ultrametric_paths(tree)) { + BDFit bd(tree, model); + bd.get_pars(poos); + delete tree; + } else { + std::cout << "Tree is not ultrametric. Exiting." << std::endl; + exit(0); + } + } + } + + if (outfileset) { + ofstr->close(); + delete poos; + } + return EXIT_SUCCESS; +} diff --git a/src/orphan_files/main_test.cpp b/src/orphan_files/main_test.cpp new file mode 100644 index 0000000..7e9acf6 --- /dev/null +++ b/src/orphan_files/main_test.cpp @@ -0,0 +1,56 @@ +/* +#include +#include +#include +#include +#include +*/ + +#include +#include + +// g++ -std=c++11 main_test.cpp -o JWB_test + +#include "vcf_reader.h" + +/* +#include "node.h" +#include "tree_reader.h" +#include "string_node_object.h" +#include "vector_node_object.h" +#include "tree.h" +#include "utils.h" +#include "sequence.h" +#include "fasta_util.h" +#include "log.h" +*/ + +int main(int argc, char * argv[]){ + + //log_call(argc, argv); + + /* + TreeReader tr; + + if (argc != 1){ + std::cout << "usage: phyx_test" << std::endl; + exit(0); + } + string datafile = "../../../projects/PHLAWD_fish/12S.keep"; + vector seqs; + FastaUtil pr; + bool phyl = pr.readFile(datafile,seqs); + std::cout << "sequences: " << seqs.size() << std::endl; + std::cout << seqs[0].get_sequence() < +#include +#include +#include + +#include "state_reconstructor_simple.h" +#include "rate_model.h" +#include "mcmc.h" +#include "tree.h" +#include "sequence.h" +#include "seq_utils.h" + +#include +using namespace arma; + + +void sm0_mcmc(int reps, int sampleiter, Tree * tree, StateReconstructorSimple& sr, + RateModel& rm, std::vector& seqs, std::vector& sr_seqs, + std::map >& codon_pos, mat& bf, mat& K, mat& w, mat& inq) { + + int sites = (seqs[0].get_length()/3); + double curlike = 0; + double sw = 0.5; + rm.selection_model = 0; + for (int s=0; s < sites; s++) { + create_std::vector_seq_codon_state_reconstructor(seqs, sr_seqs, s, codon_pos); + sr.set_tip_conditionals(sr_seqs, s); + curlike += sr.eval_likelihood(s); + rm.set_sameQ(true); + } + std::cout << "start likelihood: " << curlike << std::endl; + + std::default_random_engine re; + + double newlike = 0; + double startk = 1.0; //start + double startw = 1.0; //startw + for (int i=0; i < reps; i++) { + std::uniform_real_distribution unif1(startk - sw, startk + sw); + std::uniform_real_distribution unif2(startw - sw, startw + sw); + double newk = fabs(unif1(re)); + double neww = fabs(unif2(re)); + newlike = 0; + update_simple_goldman_yang_q(&inq, newk, neww, bf, K, w); + rm.setup_Q(inq); + sr.clear_std::map_ps(); + for (int s=0; s < sites; s++) { + //create_std::vector_seq_codon_state_reconstructor(seqs, sr_seqs, s, codon_pos); + //sr.set_tip_conditionals(sr_seqs, s); + newlike += sr.eval_likelihood(s); + rm.set_sameQ(true); + } + if (newlike < curlike) { + curlike = newlike; + startk = newk; + startw = neww; + } + if (i%sampleiter == 0) { + std::cout << "iter: "<< i << " like: " << curlike << " K: "<< startk <<" w: " << startw << std::endl; + } + } +} + + +/** + * this should have 5 parameters + * K = free, w0 = 0, w1 = 1, w2 = free, p0 = free, p1 = free, p2 = free + */ +void sm2a_mcmc(int reps, int sampleiter, Tree * tree, StateReconstructorSimple& sr, + RateModel& rm, std::vector& seqs, std::vector& sr_seqs, + std::map >& codon_pos, mat& bf, mat& K, mat& w, mat& inq0, + mat& inq1, mat& inq2) { + + int sites = (seqs[0].get_length()/3); + double curlike = 0; + double sw = 0.2; + sr.pp0 = 0.38008; sr.pp1 = 0.28326; sr.pp2 = 0.33666; + + for (int s=0; s < sites; s++) { + create_std::vector_seq_codon_state_reconstructor(seqs, sr_seqs, s, codon_pos); + sr.set_tip_conditionals(sr_seqs, s); + curlike += sr.eval_likelihood(s); + rm.set_sameQ(true); + } + std::cout << "start likelihood: " << curlike << std::endl; + + std::default_random_engine re; + + double newlike = 0; + double startk = 1.36714; //start + double startw0 = 0.0; //start w0 + double startw2 = 8.0; //start w2 + double startp0 = 0.38008; + double startp1 = 0.28326; + double startp2 = 0.33666; //not free + for (int i=0; i < reps; i++) { + std::uniform_real_distribution unif1(startk - sw, startk + sw); + std::uniform_real_distribution unif2(startw0 - sw, startw0 + sw); + std::uniform_real_distribution unif3(startw2 - sw, startw2 + sw); + std::uniform_real_distribution unif4(startp0 - sw, startp0 + sw); + std::uniform_real_distribution unif5(startp1 - sw, startp1 + sw); + std::uniform_real_distribution unif6(startp2 - sw, startp2 + sw); + + double newk = fabs(unif1(re)); + double neww0 = fabs(unif2(re)); + if (neww0 >= 1) { + neww0 = 1 - (neww0-1); + } + double neww2 = fabs(unif3(re)); + double newp0 = fabs(unif4(re)); + double newp1 = fabs(unif5(re)); + double newp2 = fabs(unif6(re)); + + double sum1 = newp0 + newp1 + newp2; + newp0 = newp0/sum1; newp1 = newp1/sum1; newp2 = newp2/sum1; + sr.pp0 = newp0; sr.pp1 = newp1; sr.pp2 = newp2; + + newlike = 0; + //only do it with + update_simple_goldman_yang_q(&inq0, newk, neww0, bf, K, w); + update_simple_goldman_yang_q(&inq2, newk, neww2, bf, K, w); + rm.set_Q_which(inq0, 0); + rm.set_Q_which(inq2, 2); + sr.clear_std::map_ps(); + for (int s=0; s < sites; s++) { + //create_std::vector_seq_codon_state_reconstructor(seqs, sr_seqs, s, codon_pos); + //sr.set_tip_conditionals(sr_seqs, s); + newlike += sr.eval_likelihood(s); + rm.set_sameQ(true); + } + if (newlike < curlike) { + curlike = newlike; + startk = newk; + startw0 = neww0; + startw2 = neww2; + startp0 = newp0; + startp1 = newp1; + startp2 = newp2; + } + if (i % sampleiter == 0) { + std::cout << "iter: "<< i << " like: " << curlike << " K: "<< startk <<" w0: " + << startw0 << " w2: " << startw2 << " p0: " << startp0 << " p1: " << startp1 + << " p2: "<< startp2 << std::endl; + } + } +} diff --git a/src/orphan_files/mcmc.h b/src/orphan_files/mcmc.h new file mode 100644 index 0000000..c8985bf --- /dev/null +++ b/src/orphan_files/mcmc.h @@ -0,0 +1,40 @@ +#ifndef _MCMC_H_ +#define _MCMC_H_ + +#include +#include + +#include "state_reconstructor_simple.h" +#include "rate_model.h" +#include "tree.h" +#include "sequence.h" + +#include +using namespace arma; + + +void sm0_mcmc(int reps, int sampleiter, Tree * tree, StateReconstructorSimple& sr, + RateModel& rm, std::vector& seqs, std::vector& sr_seqs, + std::map >& codon_pos, mat& bf, mat& K, mat& w, mat& inq); + +void sm2a_mcmc(int reps, int sampleiter, Tree * tree, StateReconstructorSimple& sr, + RateModel& rm, std::vector& seqs, std::vector& sr_seqs, + std::map >& codon_pos, mat& bf, mat& K, mat& w, mat& inq0, + mat& inq1, mat& inq2); + +void sm0_prof(int reps, int sampleiter, Tree * tree, StateReconstructorSimple& sr, + RateModel& rm, std::vector& seqs, std::vector& sr_seqs, + std::map >& codon_pos, mat& bf, mat& K, mat& w, mat& inq); + +void sm0_bmcmc(int reps, int sampleiter, Tree * tree, StateReconstructorSimple& sr, + RateModel& rm, std::vector& seqs, std::vector& sr_seqs, + std::map >& codon_pos, mat& bf, mat& K, mat& w, mat& inq); + +double accept_prob(double& curLike, double& propLike, double& curPrior, double& propPrior, + int& curD, int& propD, int& N); + +double likelihood_ratio(double& curLike, double& propLike); + +double hastings_ratio(int& curD, int& propD, int& N); + +#endif /* _MCMC_H_ */ diff --git a/src/orphan_files/optimize_state_reconstructor_gsl.cpp b/src/orphan_files/optimize_state_reconstructor_gsl.cpp new file mode 100644 index 0000000..7faba49 --- /dev/null +++ b/src/orphan_files/optimize_state_reconstructor_gsl.cpp @@ -0,0 +1,115 @@ +#include +//#include +#include +#include + +#include +using namespace arma; + +#include "optimize_state_reconstructor.h" +#include "rate_model.h" +#include "state_reconstructor.h" + +#include +#include + + +OptimizeStateReconstructor::OptimizeStateReconstructor (RateModel * _rm,StateReconstructor * _sr, mat * _free_mask, int _nfree): + rm(_rm),sr(_sr),free_variables(_free_mask),nfree_variables(_nfree),maxiterations(10000),stoppingprecision(0.001) {} + + +double OptimizeStateReconstructor::GetLikelihoodWithOptimized (const gsl_vector * variables) { + for (unsigned int i = 0; i < free_variables->n_rows; i++) { + for (unsigned int j = 0; j < free_variables->n_cols; j++) { + if (i != j) { + rm->set_Q_cell(i,j,gsl_vector_get(variables,(*free_variables)(i, j))); + if (rm->get_Q()(i, j) < 0 || rm->get_Q()(i, j) >= 1000) { + return 100000000; + } + } + } + } + double like; + rm->set_Q_diag(); + like = sr->eval_likelihood(); + //std::cout << like << std::endl; + if (like < 0 || like == std::numeric_limits::infinity()) { + like = 100000000; + } + return like; +} + + +double OptimizeStateReconstructor::GetLikelihoodWithOptimized_gsl (const gsl_vector * variables, void *obj) { + double temp; + temp= ((OptimizeStateReconstructor*)obj)->GetLikelihoodWithOptimized(variables); + return temp; +} + + +/* + * USES THE SIMPLEX ALGORITHM + */ +mat OptimizeStateReconstructor::optimize () { + const gsl_multimin_fminimizer_type *T = gsl_multimin_fminimizer_nmsimplex2; + gsl_multimin_fminimizer *s = NULL; + gsl_vector *ss, *x; + size_t np = nfree_variables; + size_t iter = 0, i; + int status; + double size; + /* Initial vertex size vector */ + ss = gsl_vector_alloc (np); + /* Set all step sizes to .01 */ //Note that it was originally 1 + gsl_vector_set_all (ss, .2); + /* Starting point */ + //std::cout<<"Now in OPtimizaRateWithGivenTipVariance in OptimizationFn"<x, i)); + } + //printf ("f() = %7.3f size = %.3f\n", s->fval, size); + } + while (status == GSL_CONTINUE && iter < maxiterations); + mat results (free_variables->n_rows, free_variables->n_cols); results.fill(0); + for (unsigned int i = 0; i < results.n_rows; i++) { + for (unsigned int j = 0; j < results.n_cols; j++) { + if (i != j) { + results(i, j) = (gsl_vector_get(s->x, (*free_variables)(i, j))); + } + } + } + gsl_vector_free(x); + gsl_vector_free(ss); + gsl_multimin_fminimizer_free (s); + return results; +} diff --git a/src/orphan_files/optimize_state_reconstructor_gsl.h b/src/orphan_files/optimize_state_reconstructor_gsl.h new file mode 100644 index 0000000..3d57e10 --- /dev/null +++ b/src/orphan_files/optimize_state_reconstructor_gsl.h @@ -0,0 +1,29 @@ +#ifndef _OPTIMIZE_STATE_RECONSTRUCTOR_GSL_H_ +#define _OPTIMIZE_STATE_RECONSTRUCTOR_GSL_H_ + +class RateModel; // forward declaration +class StateReconstructor; // forward declaration + +#include +using namespace arma; + +#include + +class OptimizeStateReconstructor { +private: + RateModel * rm; + StateReconstructor * sr; + mat * free_variables; + int nfree_variables; + int maxiterations; + double stoppingprecision; + + double GetLikelihoodWithOptimized(const gsl_vector * variables); + static double GetLikelihoodWithOptimized_gsl(const gsl_vector * variables, void *obj); + +public: + OptimizeStateReconstructor(RateModel *,StateReconstructor *, mat *, int); + mat optimize(); +}; + +#endif /* _OPTIMIZE_STATE_RECONSTRUCTOR_GSL_H_ */ diff --git a/src/orphan_files/state_reconstructor_simple.cpp b/src/orphan_files/state_reconstructor_simple.cpp new file mode 100644 index 0000000..d27f818 --- /dev/null +++ b/src/orphan_files/state_reconstructor_simple.cpp @@ -0,0 +1,218 @@ +// commented out of Makefile + +#include +#include +#include + +#include "state_reconstructor_simple.h" +#include "tree.h" +#include "rate_model.h" +#include "node.h" +#include "utils.h" +#include "vector_node_object.h" +#include "sequence.h" + +#define verbose false + +#define MINBL 0.000000001 + + +/** + * this can take the multiple states + */ + +StateReconstructorSimple::StateReconstructorSimple (RateModel& _rm, int num_sites):tree(NULL), + nstates(_rm.nstates),nsites(num_sites),rm(_rm),dc("dist_conditionals"),v_storage(_rm.nstates,0), + v1(_rm.nstates,0),v2(_rm.nstates,0) {} + + +/* + * initialize each node with segments + */ +void StateReconstructorSimple::set_tree (Tree * tr) { + tree = tr; + if (verbose) { + std::cout << "initializing nodes..." << std::endl; + } + for (int i=0; i < tree->getNodeCount(); i++) { + if (tree->getNode(i)->getBL()getNode(i)->setBL(MINBL * 100); + } + //VectorNodeObject * dcs = new VectorNodeObject(nstates); + vector > tv; + for (int j=0; j < nsites; j++) { + std::vector tn(nstates); + tv.push_back(tn); + } + conditionals_map[tree->getNode(i)] = tv; + //tree->getNode(i)->assocObject(dc,*dcs); + //delete dcs; + } +} + + +bool StateReconstructorSimple::set_tip_conditionals (std::vector& distrib_data, int site) { + bool allsame = true; + std::string testsame = distrib_data[0].get_sequence(); + for (unsigned int i=0; i < distrib_data.size(); i++) { + Sequence seq = distrib_data[i]; + Node * nd = tree->getExternalNode(seq.get_id()); + if (verbose) { + std::cout << nd->getName() << " "; + } + for (int j=0; j < nstates; j++) { + if (seq.get_sequence().at(j) == '1') { + //(((VectorNodeObject*) nd->getObject(dc)))->at(j) = 1.0; + conditionals_map[nd][site][j] = 1.0; + } else { + //(((VectorNodeObject*) nd->getObject(dc)))->at(j) = 0.0; + conditionals_map[nd][site][j] = 0.0; + } + if (verbose) { + std::cout << seq.get_sequence().at(j); + } + } + if (verbose) { + std::cout << std::endl; + } + if (testsame != seq.get_sequence()) { + allsame = false; + } + } + if (allsame == true && verbose == true) { + std::cerr << "all the tips have the same characters" << std::endl; + } + return allsame; +} + + +//VectorNodeObject +void StateReconstructorSimple::conditionals (std::vector * v, Node & node, int site) { +// VectorNodeObject distconds = *((VectorNodeObject*) node.getObject(dc)); + std::vector * tdistconds = &conditionals_map[&node][site]; + + //VectorNodeObject * v = new VectorNodeObject (nstates, 0); + if (map_ps.count(node.getBL()) == 0) { + mat tp(nstates,nstates); + rm.setup_fortran_P(tp,node.getBL(),false); + map_ps[node.getBL()] = tp; + } + mat * p = &map_ps[node.getBL()]; + for (int j=0; j < nstates; j++) { + v_storage[j] = 0; + for ( int k=0; k < nstates; k++) { + //v_storage[j] += (distconds.at(k)*(*p)(j,k)); + v_storage[j] += tdistconds->at(k)*(*p)(j, k); + } + } + for (unsigned int j=0; j < tdistconds->size(); j++) { + //distconds[j] = v_storage[j]; + //tdistconds->at(j) = v_storage[j]; + (*v)[j] = v_storage[j]; + } +// return distconds; +} + + +//model 2a +void StateReconstructorSimple::conditionals2(std::vector * v, Node & node, int site) { + std::vector * tdistconds = &conditionals_map[&node][site]; + if (map_ps0.count(node.getBL()) == 0) { + mat tp0(nstates,nstates); + mat tp1(nstates,nstates); + mat tp2(nstates,nstates); + rm.setup_fortran_P_whichQ(0,tp0,node.getBL()); + rm.setup_fortran_P_whichQ(1,tp1,node.getBL()); + rm.setup_fortran_P_whichQ(2,tp2,node.getBL()); + + map_ps0[node.getBL()] = tp0; + map_ps1[node.getBL()] = tp1; + map_ps2[node.getBL()] = tp2; + } + mat * p0 = &map_ps0[node.getBL()]; + mat * p1 = &map_ps1[node.getBL()]; + mat * p2 = &map_ps2[node.getBL()]; + + for (int j=0; j < nstates; j++) { + v_storage[j] = 0; + for (int k=0; k < nstates; k++) { + //v_storage[j] += (distconds.at(k)*(*p)(j, k)); + v_storage[j] += tdistconds->at(k)*(*p0)(j, k) * pp0; + v_storage[j] += tdistconds->at(k)*(*p1)(j, k) * pp1; + v_storage[j] += tdistconds->at(k)*(*p2)(j, k) * pp2; + } + } + for (unsigned int j=0; j < tdistconds->size(); j++) { + (*v)[j] = v_storage[j]; + } +} + + +void StateReconstructorSimple::ancdist_conditional_lh(Node& node, int site) { +// VectorNodeObject distconds(nstates, 0); + std::vector * distconds = &conditionals_map[&node][site]; + if (node.isExternal() == false) {//is not a tip + Node * c1 = node.getChild(0); + Node * c2 = node.getChild(1); + ancdist_conditional_lh(*c1, site); + ancdist_conditional_lh(*c2, site); + //VectorNodeObject v1; + //VectorNodeObject v2; + //v1 =conditionals(*c1,site); + //v2 =conditionals(*c2,site); + if (rm.selection_model == 0) { + conditionals(&v1,*c1, site); + conditionals(&v2,*c2, site); + } else if (rm.selection_model == 2) { + conditionals2(&v1,*c1, site); + conditionals2(&v2,*c2, site); + } + //std::vector * v1 = &conditionals_map[c1][site]; + //std::vector * v2 = &conditionals_map[c2][site]; + for (int i=0; i < nstates; i++) { + // distconds.at(i)= v1[i] * v2[i]; + distconds->at(i) = v1[i] * v2[i]; + } + if (node.isRoot()) { + //with equal freq! + for (int i=0; i < nstates; i++) { + distconds->at(i) = distconds->at(i) * (1./nstates); + } + } + } +// } else { +// distconds = *((VectorNodeObject*)node.getObject(dc)); +// } +// for (unsigned int i=0; i < distconds.size(); i++) { +// ((VectorNodeObject*)node.getObject(dc))->at(i) = distconds.at(i); +// } +} + + +double StateReconstructorSimple::eval_likelihood (int site) { + ancdist_conditional_lh(*tree->getRoot(), site); +// return (-log(sum(* +// (VectorNodeObject*) tree->getRoot()->getObject(dc)))); + return (-log(sum(conditionals_map[tree->getRoot()][site]))); + //return double(-(calculate_vector_Superdouble_sum(*(VectorNodeObject*) tree->getRoot()->getObject(dc))).getLn()); +} + + +void StateReconstructorSimple::clear_map_ps () { + if (rm.selection_model == 0) { + map_ps.clear(); + } else if (rm.selection_model == 1) { + + // something supposed to go here? + + } else if (rm.selection_model == 2) { + map_ps0.clear(); + map_ps1.clear(); + map_ps2.clear(); + } +} + + +StateReconstructorSimple::~StateReconstructorSimple () { + +} diff --git a/src/orphan_files/state_reconstructor_simple.h b/src/orphan_files/state_reconstructor_simple.h new file mode 100644 index 0000000..01f69af --- /dev/null +++ b/src/orphan_files/state_reconstructor_simple.h @@ -0,0 +1,49 @@ +#ifndef _STATE_RECONSTRUCTOR_SIMPLE_H_ +#define _STATE_RECONSTRUCTOR_SIMPLE_H_ + +#include +#include +#include + +#include "tree.h" +#include "node.h" +#include "rate_model.h" +#include "vector_node_object.h" +#include "sequence.h" + + +class StateReconstructorSimple { +private: + Tree * tree; + int nstates; + int nsites; + RateModel& rm; + std::string dc; + + std::map map_ps; + std::map map_ps0; + std::map map_ps1; + std::map map_ps2; + std::map > > conditionals_map; + std::vector v_storage; //just junk storage + std::vector v1; + std::vector v2; + + //VectorNodeObject + void conditionals (std::vector * v, Node& node, int site); + void conditionals2 (std::vector * v, Node& node, int site); + void ancdist_conditional_lh (Node& node, int site); + +public: + StateReconstructorSimple (RateModel&, int); + void set_tree(Tree *); + double eval_likelihood (int site); + bool set_tip_conditionals (std::vector& distrib_data, int); + void clear_map_ps(); + double pp0; + double pp1; + double pp2; + ~StateReconstructorSimple (); +}; + +#endif /* _STATE_RECONSTRUCTOR_SIMPLE_H_ */ diff --git a/src/pairwise_alignment.cpp b/src/pairwise_alignment.cpp new file mode 100644 index 0000000..8f9be47 --- /dev/null +++ b/src/pairwise_alignment.cpp @@ -0,0 +1,199 @@ +#include +#include +#include +#include + +#include "sequence.h" +#include "pairwise_alignment.h" +#include "utils.h" + + +/** + * Needleman-Wunsch + * returning aln1, aln2 strings and score + * + * scoringmatrix should come from read_score_matrix + */ +double nw (Sequence& iseq1, Sequence& iseq2, + std::map >& scoringmatrix, double gap_penalty, + std::string& aln1, std::string& aln2) { + + std::string seq1 = iseq1.seq_to_upper(); + std::string seq2 = iseq2.seq_to_upper(); + + std::vector > F; + for (unsigned int i = 0; i < seq2.length()+1; i++) { + std::vector b; + for (unsigned int j = 0; j < seq1.length()+1; j++) { + b.push_back(0); + } + F.push_back(b); + } + double d = gap_penalty; // just easier to read + for (unsigned int i = 0; i < seq1.length()+1; i++) { + F[0][i] = d*i; + } + for (unsigned int j = 0; j < seq2.length()+1; j++) { + F[j][0] = d*j; + } + for (unsigned int j = 1; j < seq2.length()+1; j++) { + for (unsigned int i = 1; i < seq1.length()+1; i++) { + double mat = F[j-1][i-1] + scoringmatrix[seq1[i-1]][seq2[j-1]]; + double del = F[j-1][i] + d; + double ins = F[j][i-1] + d; + double v = mat; + if (del > v) { + v = del; + } + if (ins > v) { + v = ins; + } + F[j][i] = v; + } + } + aln1 = ""; + aln2 = ""; + unsigned long i = seq1.length(); + unsigned long j = seq2.length(); + while (i > 0 || j > 0) { + double score = F[j][i]; + double scorediag = -999; + if (j > 0 && i > 0) { + scorediag = F[j-1][i-1]; + } + double scoreup = -999; + if (j > 0) { + scoreup = F[j-1][i]; + } + double scoreleft = -999; + if (i > 0) { + scoreleft = F[j][i-1]; + } + if (i > 0 && j > 0 && essentially_equal(score, scorediag + scoringmatrix[seq1[i-1]][seq2[j-1]])) { + aln1.append(1, seq1[i-1]); + aln2.append(1, seq2[j-1]); + i = i - 1; + j = j - 1; + } else if ( i > 0 && essentially_equal(score, scoreleft + d)) { + aln1.append(1, seq1[i-1]); + aln2.append("-"); + i = i - 1; + } else if (j > 0 && essentially_equal(score, scoreup + d)) { + aln1.append("-"); + aln2.append(1, seq2[j-1]); + j = j - 1; + } + } + std::reverse(aln1.begin(), aln1.end()); + std::reverse(aln2.begin(), aln2.end()); + double score = 0; + for (unsigned int k = 0; k < aln1.length(); k++) { + if (aln1[k] != '-' && aln2[k] != '-') { + score = score + scoringmatrix[aln1[k]][aln2[k]]; + } else { + score = score + gap_penalty; + } + } + return score; +} + + +/** + * Smith-Waterman + * returning aln1, aln2 strings and score + * + * scoringmatrix should come from read_score_matrix + */ +double sw (Sequence& iseq1, Sequence& iseq2, + std::map >& scoringmatrix, double gap_penalty, + std::string& aln1, std::string& aln2) { + + std::string seq1 = iseq1.seq_to_upper(); + std::string seq2 = iseq2.seq_to_upper(); + + std::vector > F; + for (unsigned int i = 0; i < seq2.length()+1; i++) { + std::vector b; + for (unsigned int j = 0; j < seq1.length()+1; j++) { + b.push_back(0); + } + F.push_back(b); + } + double d = gap_penalty; // just easier to read + for (unsigned int i = 0; i < seq1.length()+1; i++) { + F[0][i] = d*i; + } + for (unsigned int j = 0; j < seq2.length()+1; j++) { + F[j][0] = d*j; + } + unsigned int besti = 0; + unsigned int bestj = 0; + double bestsc = 0; + for (unsigned int j = 1; j < seq2.length()+1; j++) { + for (unsigned int i = 1; i < seq1.length()+1; i++) { + double mat = F[j-1][i-1] + scoringmatrix[seq1[i-1]][seq2[j-1]]; + double del = F[j-1][i] + d; + double ins = F[j][i-1] + d; + double v = mat; + if (del > v) { + v = del; + } + if (ins > v) { + v = ins; + } + F[j][i] = v; + if (v > bestsc) { + bestsc = v; + besti = i; + bestj = j; + } + } + } + aln1 = ""; + aln2 = ""; + unsigned long i = besti; + unsigned long j = bestj; + while (i > 0 && j > 0) { + double score = F[j][i]; + if (essentially_equal(score, 0.0)) { + break; + } + double scorediag = -999; + if ( j > 0 && i > 0) { + scorediag = F[j-1][i-1]; + } + double scoreup = -999; + if (j > 0) { + scoreup = F[j-1][i]; + } + double scoreleft = -999; + if (i > 0) { + scoreleft = F[j][i-1]; + } + if (i > 0 && j > 0 && essentially_equal(score, scorediag + scoringmatrix[seq1[i-1]][seq2[j-1]])) { + aln1.append(1, seq1[i-1]); + aln2.append(1, seq2[j-1]); + i = i - 1; + j = j - 1; + } else if (i > 0 && essentially_equal(score, scoreleft + d)) { + aln1.append(1, seq1[i-1]); + aln2.append("-"); + i = i - 1; + } else if (j > 0 && essentially_equal(score, scoreup + d)) { + aln1.append("-"); + aln2.append(1, seq2[j-1]); + j = j - 1; + } + } + std::reverse(aln1.begin(), aln1.end()); + std::reverse(aln2.begin(), aln2.end()); + double score = 0; + for (unsigned int k = 0; k < aln1.length(); k++) { + if (aln1[k] != '-' && aln2[k] != '-') { + score = score + scoringmatrix[aln1[k]][aln2[k]]; + } else { + score = score + gap_penalty; + } + } + return score; +} diff --git a/src/pairwise_alignment.h b/src/pairwise_alignment.h new file mode 100644 index 0000000..516c9ba --- /dev/null +++ b/src/pairwise_alignment.h @@ -0,0 +1,14 @@ +#ifndef PX_PAIRWISE_ALIGNMENT_H +#define PX_PAIRWISE_ALIGNMENT_H + +#include +#include + +class Sequence; // forward declaration + +double nw(Sequence& iseq1, Sequence& iseq2, std::map >& scoringmatrix, + double gap_penalty, std::string& aln1, std::string& aln2); +double sw(Sequence& iseq1, Sequence& iseq2, std::map >& scoringmatrix, + double gap_penalty, std::string& aln1, std::string& aln2); + +#endif /* PX_PAIRWISE_ALIGNMENT_H */ diff --git a/src/polytomy.cpp b/src/polytomy.cpp new file mode 100644 index 0000000..e4eb022 --- /dev/null +++ b/src/polytomy.cpp @@ -0,0 +1,81 @@ +#include +#include +#include + +#include "tree.h" +#include "tree_utils.h" +#include "polytomy.h" +#include "utils.h" +#include "node.h" + + +Polytomy::Polytomy (const long int& seed) { + if (seed == -1) { + srand(get_clock_seed()); + } else { + srand(static_cast(seed)); + } +} + + +// for each polytomy, remove all but 2 random descendants +void Polytomy::sample_polytomies (Tree * tr) { + bool verbose = false; + std::vector tchildren; + + // welp with multiple trees do not want to keep this + terminals_to_prune_.clear(); + + // currently works up through the tree + // hrm maybe go from root down? would save on duplicates + for (unsigned int i = 0; i < tr->getInternalNodeCount(); i++) { + tchildren.clear(); + Node * m = tr->getInternalNode(i); + + unsigned int numChildren = m->getChildCount(); + if (numChildren > 2) { + // select random taxa to prune + std::vector terp = sample_without_replacement(numChildren, (numChildren - 2)); + if (verbose) { + std::cout << "numChildren for node " << m->getName() + << " = " << numChildren << std::endl; + for (unsigned int p = 0; p < numChildren; p++) { + std::cout << p << ". " << m->getChild(p)->getName() << std::endl; + } + } + + for (unsigned int j : terp) { + Node * n = m->getChild(j); + if (n->isExternal()) { + terminals_to_prune_.push_back(n->getName()); + if (verbose) { + std::cout << "Random tip chosen to purge: " + << n->getName() << std::endl; + } + } else { + // if internal, grab all terminal descendants and add to purge list + get_terminal_children(n, tchildren); + if (verbose) { + std::cout << "welp dealing with an internal node to prune here..." + << std::endl; + } + for (const auto & k : tchildren) { + terminals_to_prune_.push_back(k); + if (verbose) { + std::cout << "Descendant tip to be purged: " + << k << std::endl; + } + } + } + } + } + } + if (!terminals_to_prune_.empty()) { + // get rid of any duplicates (can happen with nested polytomies) + terminals_to_prune_ = get_unique_elements(terminals_to_prune_); + if (verbose) { + print_vector(terminals_to_prune_); + } + remove_tips(tr, terminals_to_prune_, true); + } +} diff --git a/src/polytomy.h b/src/polytomy.h new file mode 100644 index 0000000..1cdc828 --- /dev/null +++ b/src/polytomy.h @@ -0,0 +1,18 @@ +#ifndef PX_POLYTOMY_TREE_H +#define PX_POLYTOMY_TREE_H + +class Tree; // forward declaration + +// do stuff with polytomies + +class Polytomy { +private: + + std::vector terminals_to_prune_; + +public: + explicit Polytomy (const long int& seed); + void sample_polytomies (Tree * tr); +}; + +#endif /* PX_POLYTOMY_TREE_H */ diff --git a/src/python_trees.py b/src/python_trees.py new file mode 100644 index 0000000..6896a60 --- /dev/null +++ b/src/python_trees.py @@ -0,0 +1,92 @@ +#!/usr/bin/env python3 + +# generates all (2 * (n + 1) - 5)!! rooted trees for n taxa +# hacked version of https://stackoverflow.com/a/14901512/3389183 + +import sys +import string + +# A very simple representation for Nodes. +# Leaves are anything which is not a Node. +class Node(object): + def __init__(self, left, right): + self.left = left + self.right = right + + def __repr__(self): + return '(%s %s)' % (self.left, self.right) + +# Given a tree and a label, yields every possible augmentation of the tree by +# adding a new node with the label as a child "above" some existing Node or Leaf. +def add_leaf(tree, label): + yield Node(label, tree) + if isinstance(tree, Node): + for left in add_leaf(tree.left, label): + yield Node(left, tree.right) + for right in add_leaf(tree.right, label): + yield Node(tree.left, right) + +# Given a list of labels, yield each rooted, unordered full binary tree with +# the specified labels. +def enum_unordered(labels): + if len(labels) == 1: + yield labels[0] + else: + for tree in enum_unordered(labels[1:]): + for new_tree in add_leaf(tree, labels[0]): + yield new_tree + +def dfactorial(n): + if n == 0 or n == 1: + return 1 + else: + return n * dfactorial(n-2) + +def get_num_trees(n): + # (2 * (n + 1) - 5)!! + N = 2 * (n + 1) - 5 + return dfactorial(N) + +def usage(): + print("Usage: python3 python_trees.py num_tips [outfile]") + +def main(n, outfile): + #labels = tuple(string.ascii_uppercase[:n]) + #labels = tuple(string.ascii_uppercase[:n]) # simple letters (limited to 26) + labels = tuple("taxon_" + str(i) for i in range(1, (n + 1))) # match pxbdsim labels + if outfile is not None: + outf = open(outfile,"w") + i = 1 + for tree in enum_unordered(labels): + phy = str(tree).replace(" ", ",") + print(str(i) + ". " + phy + ";") + if outfile is not None: + outf.write(phy + ";\n") + i += 1 + +if __name__ == "__main__": + n = None + outfile = None + + if len(sys.argv) == 1 or len(sys.argv) > 3: + usage() + exit() + + nt = sys.argv[1] + if not nt.isdigit(): + usage() + exit() + else: + n = int(nt) + if n < 3: + print("Minimum of 3 taxa.") + exit() + elif n > 10: + print("There are " + str(get_num_trees(n)) + " trees for " + str(n) + + " taxa. I don't think you want that.") + exit() + if len(sys.argv) == 3: + outfile = sys.argv[2] + + print("Generating " + str(get_num_trees(n)) + " rooted trees for " + str(n) + " taxa.") + main(n, outfile) diff --git a/src/rate_model.cpp b/src/rate_model.cpp new file mode 100644 index 0000000..56518c9 --- /dev/null +++ b/src/rate_model.cpp @@ -0,0 +1,442 @@ +#include +#include +#include + +#include "rate_model.h" + +#include + +using namespace arma; + + +inline int signof (double d) { + return d >= 0 ? 1 : -1; +} + + +// not used +/* +inline double roundto (double in) { + return floor(in*(1000)+0.5)/(1000); +} +*/ + + +RateModel::RateModel (int _nstates):Q(_nstates, _nstates), labels(), Q_mask(), + lasteigval(_nstates, _nstates), lasteigvec(_nstates, _nstates), + eigval(_nstates, _nstates), eigvec(_nstates, _nstates), + lasteigval_simple(_nstates, _nstates), lasteigvec_simple(_nstates, _nstates), + eigval_simple(_nstates, _nstates), eigvec_simple(_nstates, _nstates), + lastImag(true), fortran_iexph(0), fortran_wsp(nullptr), fortran_m(0), + selection_model(0), nstates(_nstates), neg_p(true) { + + setup_Q(); + sameQ = false; + lasteigval.fill(0); + lasteigvec.fill(0); + eigval.fill(0); + eigvec.fill(0); + lasteigval_simple.fill(0); + lasteigvec_simple.fill(0); + eigval_simple.fill(0); + eigvec_simple.fill(0); +} + + +void RateModel::set_Q_cell (int from, int to, double num) { + Q(from, to) = num; + set_sameQ(false); +} + + +void RateModel::set_Q_diag () { + for (unsigned int i = 0; i < Q.n_rows; i++) { + double su = 0; + for (unsigned int j = 0; j < Q.n_cols; j++) { + if (i != j) { + su += Q(i, j); + } + } + Q(i, i) = 0-su; + } + set_sameQ(false); +} + + +void RateModel::setup_Q () { + Q.fill(0); + for (unsigned int i = 0; i < Q.n_rows; i++) { + for (unsigned int j = 0; j < Q.n_cols; j++) { + if (i != j) { + Q(i, j) = 1./nstates; + } else { + Q(i, j) = -(1./nstates * (nstates-1)); + } + } + } + set_sameQ(false); +} + + +void RateModel::setup_Q (std::vector< std::vector >& inQ) { + for (unsigned int i = 0; i < Q.n_rows; i++) { + for (unsigned int j = 0; j < Q.n_cols; j++) { + Q(i, j) = inQ[i][j]; + } + } + for (unsigned int i = 0; i < Q.n_rows; i++) { + colvec a = (sum(Q, 1)); + Q(i, i) = -(a(i)-Q(i, i)); + } + set_sameQ(false); +} + + +void RateModel::setup_Q (mat& inQ) { + for (unsigned int i = 0; i < Q.n_rows; i++) { + for (unsigned int j = 0; j < Q.n_cols; j++) { + Q(i, j) = inQ(i, j); + } + } + set_Q_diag(); + set_sameQ(false); +} + + +// not used +void RateModel::set_n_qs (int number) { + for (int i = 0; i < number; i++) { + mat tm(nstates, nstates); + Qs.push_back(tm); + } +} + + +void RateModel::set_Q_which (mat& inQ, int which) { + for (unsigned int i = 0; i < Qs[which].n_rows; i++) { + for (unsigned int j = 0; j < Qs[which].n_cols; j++) { + Qs[which](i, j) = inQ(i, j); + } + } + for (unsigned int i = 0; i < Qs[which].n_rows; i++) { + double su = 0; + for (unsigned int j = 0; j < Qs[which].n_cols; j++) { + if (i != j) { + su += Qs[which](i, j); + } + } + Qs[which](i, i) = 0-su; + } + set_sameQ(false); +} + + +void RateModel::set_Q (mat& inQ) { + for (unsigned int i = 0; i < Q.n_rows; i++) { + for (unsigned int j = 0; j < Q.n_cols; j++) { + Q(i, j) = inQ(i, j); + } + } + set_sameQ(false); +} + + +mat& RateModel::get_Q () { + return Q; +} + + +cx_mat RateModel::setup_P (double bl, bool store_p_matrices) { + //sameQ = false; + eigvec.fill(0); + eigval.fill(0); + get_eigenvec_eigenval_from_Q(&eigval, &eigvec); // not currently used + //std::cout << eigval << std::endl; + //std::cout << eigvec << std::endl; + for (int i = 0; i < nstates; i++) { + eigval(i, i) = exp(eigval(i, i) * bl); + } + cx_mat C_inv = inv(eigvec); + cx_mat P = eigvec * eigval * C_inv; + neg_p = false; + for (unsigned int i = 0; i < P.n_rows; i++) { + for (unsigned int j = 0; j < P.n_cols; j++) { + if (real(P(i, j))<0) + neg_p = true; + } + } + if (store_p_matrices) { + stored_p_matrices[bl] = P; + } + return P; +} + + +void RateModel::setup_P_simple (mat& p, double bl, bool store_p_matrices) { +// sameQ = false; + eigvec_simple.fill(0); + eigval_simple.fill(0); + get_eigenvec_eigenval_from_Q_simple(&eigval_simple, &eigvec_simple); + //std::cout << eigval << std::endl; + //std::cout << eigvec << std::endl; + for (int i = 0; i < nstates; i++) { + eigval_simple(i, i) = exp(eigval_simple(i, i) * bl); + } + mat C_inv = inv(eigvec_simple); + p = eigvec_simple * eigval_simple * C_inv; +/* if (store_p_matrices) { + stored_p_matrices[bl] = P; + }*/ + //return P; +} + + +void RateModel::get_eigenvec_eigenval_from_Q_simple (mat * eigval, mat * eigvec) { + if (sameQ) { + for (unsigned int i = 0; i < Q.n_rows; i++) { + for (unsigned int j = 0; j < Q.n_cols; j++) { + (*eigval)(i, j) = lasteigval_simple(i, j); + (*eigvec)(i, j) = lasteigvec_simple(i, j); + } + } + return; + } + mat tQ(nstates, nstates); + tQ.fill(0); + for (unsigned int i = 0; i < Q.n_rows; i++) { + for (unsigned int j = 0; j < Q.n_cols; j++) { + tQ(i, j) = Q(i, j); + } + } + colvec eigva; + mat eigve; + eig_sym(eigva, eigve, tQ); + //bool isImag = false; // not used + for (unsigned int i = 0; i < Q.n_rows; i++) { + for (unsigned int j = 0; j < Q.n_cols; j++) { + if (i == j) { + (*eigval)(i, j) = eigva(i); + lasteigval_simple(i, j) = eigva(i); + } else { + (*eigval)(i, j) = 0; + lasteigval_simple(i, j) = 0; + } + (*eigvec)(i, j) = eigve(i, j); + lasteigvec_simple(i, j) = eigve(i, j); + } + } + return; +} + + +/* + * this should be used to caluculate the eigenvalues and eigenvectors + * as U * Q * U-1 -- eigen decomposition + * + * this should use the armadillo library + */ +bool RateModel::get_eigenvec_eigenval_from_Q (cx_mat * eigval, cx_mat * eigvec) { + if (sameQ) { + for (unsigned int i = 0; i < Q.n_rows; i++) { + for (unsigned int j = 0; j < Q.n_cols; j++) { + (*eigval)(i, j) = lasteigval(i, j); + (*eigvec)(i, j) = lasteigvec(i, j); + } + } + return lastImag; + } + mat tQ(nstates, nstates); + tQ.fill(0); + for (unsigned int i = 0; i < Q.n_rows; i++) { + for (unsigned int j = 0; j < Q.n_cols; j++) { + tQ(i, j) = Q(i, j); + } + } + cx_colvec eigva; + cx_mat eigve; + eig_gen(eigva, eigve, tQ); + bool isImag = false; + for (unsigned int i = 0; i < Q.n_rows; i++) { + for (unsigned int j = 0; j < Q.n_cols; j++) { + if (i == j) { + (*eigval)(i, j) = eigva(i); + lasteigval(i, j) = eigva(i); + } else { + (*eigval)(i, j) = 0; + lasteigval(i, j) = 0; + } + (*eigvec)(i, j) = eigve(i, j); + lasteigvec(i, j) = eigve(i, j); + if (imag((*eigvec)(i, j)) > 0 || imag((*eigval)(i, j))) { + isImag = true; + } + } + } + //lasteigval = eigval; + //lasteigvec = eigvec; + lastImag = isImag; + return isImag; +} + + +//taking out fortran +// +/* +extern"C" { + void wrapalldmexpv_(int * n, int* m, double * t, double* v, double * w, double* tol, + double* anorm, double* wsp, int * lwsp, int* iwsp, int *liwsp, int * itrace, + int *iflag, int *ia, int *ja, double *a, int *nz, double * res); + void wrapsingledmexpv_(int * n, int* m, double * t, double* v, double * w, double* tol, + double* anorm, double* wsp, int * lwsp, int* iwsp, int *liwsp, int * itrace, + int *iflag, int *ia, int *ja, double *a, int *nz, double * res); + void wrapdgpadm_(int * ideg, int * m, double * t, double * H, int * ldh, double * wsp, + int * lwsp, int * ipiv, int * iexph, int *ns, int *iflag ); +} + +void RateModel::setup_fortran_P_whichQ (int which, mat& P, double t) { + Q = Qs[which]; + setup_fortran_P(P,t,false); +} +*/ +//taking out fortran +/* + * runs the basic padm fortran expokit full matrix exp + * +void RateModel::setup_fortran_P (mat& P, double t, bool store_p_matrices) { + // + // return P, the matrix of dist-to-dist transition probabilities, + // from the model's rate matrix (Q) over a time duration (t) + // + int ideg = 6; + int m = Q.n_rows; // square so you only need the rows + int ldh = m; + double tol = 1; + int iflag = 0; + int lwsp = 4*m*m+6+1; + double * wsp = new double[lwsp]; + int * ipiv = new int[m]; + int iexph = 0; + int ns = 0; + double * H = new double [m*m]; + convert_matrix_to_single_row_for_fortran(Q, t, H); + wrapdgpadm_(&ideg, &m, &tol, H, &ldh, wsp, &lwsp, ipiv, &iexph, &ns, &iflag); + + for (int i = 0; i < m; i++) { + for (int j = 0; j < m; j++) { + P(i, j) = wsp[iexph + (j-1) * m + (i-1) + m]; + } + } + delete [] wsp; + delete [] ipiv; + delete [] H; + for (int i = 0; i < nstates; i++) { + double sum = 0.0; + for (int j = 0; j < nstates; j++) { + sum += P(i, j); + } + for (int j = 0; j < nstates; j++) { + P(i, j) = (P(i, j)/sum); + } + } + +} +*/ + + +void RateModel::set_sameQ (bool s) { + sameQ = s; +} + + +void update_simple_goldman_yang_q (mat * inm, double K, double w, mat& bigpibf, + mat& bigpiK, mat& bigpiw) { + double s = 0; + for (int i = 0; i < 61; i++) { + for (int j = 0; j < 61; j++) { + if (bigpibf(i, j) == 0) { + (*inm)(i, j) = 0; + } else { + (*inm)(i, j) = 1/61.; + if (bigpiK(i, j) != 0) { + (*inm)(i, j) *= K; + } + if (bigpiw(i, j) != 0) { + (*inm)(i, j) *= w; + } + } + if (i == j) { + (*inm)(i, j) = 0; + } + s += (*inm)(i, j); + } + } + (*inm) = (*inm)/s; + for (unsigned int i = 0; i < (*inm).n_rows; i++) { + double su = 0; + for (unsigned int j = 0; j < (*inm).n_cols; j++) { + if (i != j) { + su += (*inm)(i, j); + } + } + (*inm)(i, i) = 0-su; + } + (*inm) = (*inm)/(1/61.); + //(*inm) = trans((*inm)); +} + + +bool test_transition (char a, char b) { + bool ret = false; + if ((a == 'A' && b == 'G') || (a == 'C' && b == 'T') + || (a == 'G' && b == 'A') || (a == 'T' && b == 'C')) { + ret = true; + } + return ret; +} + + +void generate_bigpibf_K_w (mat * bf, mat * K, mat * w, + std::map& codon_dict, + std::map >& codon_index, + std::vector& codon_list) { + for (int i = 0; i < 61; i++) { + for (int j = 0; j < 61; j++) { + int diff = 0; + bool transit = false; + for (int m = 0; m < 3; m++) { + if (codon_list[i][m] != codon_list[j][m]) { + diff += 1; + } + transit = test_transition(codon_list[i][m], codon_list[j][m]); + } + if (diff > 1) { + (*bf)(i, j) = 0; + } else { + bool nonsyn = false; + if (codon_dict[codon_list[i]] != codon_dict[codon_list[j]]) { + nonsyn = true; + } + (*bf)(i, j) = 1; + if (transit) { + (*K)(i, j) = 1; + } + if (nonsyn) { + (*w)(i, j) = 1; + } + } + } + } +} + +//take out fortran +/* +void convert_matrix_to_single_row_for_fortran (mat& inmatrix, double t, double * H) { + int count = 0; + for (unsigned int i = 0; i < inmatrix.n_cols; i++) { + for (unsigned int j = 0; j < inmatrix.n_cols; j++) { + H[i+(j*inmatrix.n_cols)] = inmatrix(i, j)*t; + count += 1; + } + } +} +*/ diff --git a/src/rate_model.h b/src/rate_model.h new file mode 100644 index 0000000..1afeeac --- /dev/null +++ b/src/rate_model.h @@ -0,0 +1,72 @@ +#ifndef PX_RATE_MODEL_H +#define PX_RATE_MODEL_H + +#include +#include +#include +#include + +using namespace arma; + +class RateModel { +private: + mat Q; + std::vector Qs; + std::vector labels; + std::vector< std::vector > Q_mask; + bool sameQ; + cx_mat lasteigval; + cx_mat lasteigvec; + cx_mat eigval; + cx_mat eigvec; + mat lasteigval_simple; + mat lasteigvec_simple; + mat eigval_simple; + mat eigvec_simple; + bool lastImag; + int fortran_iexph; + double * fortran_wsp; + int fortran_m; + +public: + explicit RateModel(int _nstates); + /* + storing once optimization has occurred + map of bl and p matrix + map + */ + int selection_model; //0,2 = 2a + int nstates; + std::map stored_p_matrices; + bool neg_p; + void set_n_qs (int number); + void set_Q_which (mat& inQ, int which); + void set_Q (mat& inQ); + void set_Q_diag (); + void set_Q_cell (int, int, double); + void setup_Q (); + void setup_Q (std::vector< std::vector >& inQ); + void setup_Q (mat& inQ); + mat& get_Q (); + void set_sameQ (bool); + cx_mat setup_P (double, bool); + void setup_P_simple (mat& p, double, bool); + void setup_fortran_P_whichQ (int which, mat& P, double t); + void setup_fortran_P (mat& P, double t, bool store_p_matrices); + /* + * get things from stmap + */ + //this should be used for getting the eigenvectors and eigenvalues + bool get_eigenvec_eigenval_from_Q (cx_mat * eigval, cx_mat * eigvec); + void get_eigenvec_eigenval_from_Q_simple (mat * eigval, mat * eigvec); + +}; +void update_simple_goldman_yang_q (mat * inm, double K, double w, mat& bigpibf, + mat& bigpiK, mat& bigpiw); +bool test_transition (char a, char b); +void generate_bigpibf_K_w (mat * bf, mat * K, mat * w, std::map& codon_dict, std::map >& codon_index, + std::vector& codon_list); +void convert_matrix_to_single_row_for_fortran (mat& inmatrix, double t, double * H); + +#endif /* PX_RATE_MODEL_H */ diff --git a/src/recode.cpp b/src/recode.cpp new file mode 100644 index 0000000..4eec83e --- /dev/null +++ b/src/recode.cpp @@ -0,0 +1,164 @@ +#include +#include +#include +#include +#include + +#include "recode.h" +#include "utils.h" + + +// individual recodings +std::set SequenceRecoder::recognized_ = {'R', 'Y', 'S', 'W', 'M', 'K', 'B', + 'D', 'H', 'V', 'A', 'C', 'G', 'T'}; + +// regexes +std::regex SequenceRecoder::r_ ("A|G"); +std::regex SequenceRecoder::y_ ("C|T"); +std::regex SequenceRecoder::s_ ("C|G"); +std::regex SequenceRecoder::w_ ("A|T"); +std::regex SequenceRecoder::m_ ("A|C"); +std::regex SequenceRecoder::k_ ("G|T"); +std::regex SequenceRecoder::b_ ("C|G|T"); +std::regex SequenceRecoder::d_ ("A|G|T"); +std::regex SequenceRecoder::h_ ("A|C|T"); +std::regex SequenceRecoder::v_ ("A|C|G"); + + +// should check if nucleotide (not applicable to other seq types) +SequenceRecoder::SequenceRecoder (std::string& recodescheme):recodescheme_(string_to_upper(recodescheme)), + R_(false), Y_(false), S_(false), W_(false), M_(false), K_(false), B_(false), + D_(false), H_(false), V_(false), A_(false), C_(false), G_(false), T_(false) { + parse_scheme(); + check_valid_scheme(); +} + + +void SequenceRecoder::parse_scheme () { + for (char terp : recodescheme_) { + if (recognized_.find(terp) == recognized_.end()) { + std::cerr << "Error: recoding scheme '" << terp << "' not recognized. Exiting." + << std::endl; + exit(0); + } + switch (terp) { + case 'R': + R_ = true; + break; + case 'Y': + Y_ = true; + break; + case 'S': + S_ = true; + break; + case 'W': + W_ = true; + break; + case 'M': + M_ = true; + break; + case 'K': + K_ = true; + break; + case 'B': + B_ = true; + break; + case 'D': + D_ = true; + break; + case 'H': + H_ = true; + break; + case 'V': + V_ = true; + break; + case 'A': + A_ = true; + break; + case 'C': + C_ = true; + break; + case 'G': + G_ = true; + break; + case 'T': + T_ = true; + break; + } + } +} + + +// make sure nucleotides are not involved in more than one operation +void SequenceRecoder::check_valid_scheme () { + std::string nucs = "ACGT"; + std::vector ncounts (4); + ncounts[0] = static_cast(A_) + static_cast(R_) + static_cast(W_) + + static_cast(M_) + static_cast(D_) + static_cast(H_) + + static_cast(V_); // A + ncounts[1] = static_cast(C_) + static_cast(Y_) + static_cast(S_) + + static_cast(M_) + static_cast(B_) + static_cast(H_) + + static_cast(V_); // C + ncounts[2] = static_cast(G_) + static_cast(R_) + static_cast(S_) + + static_cast(K_) + static_cast(B_) + static_cast(D_) + + static_cast(V_); // G + ncounts[3] = static_cast(T_) + static_cast(Y_) + static_cast(W_) + + static_cast(K_) + static_cast(B_) + static_cast(D_) + + static_cast(H_); // T + + bool invalid = false; + for (unsigned int i = 0; i < ncounts.size(); i++) { + if (ncounts[i] > 1) { + invalid = true; + std::cerr << "Error: nucleotide '" << nucs[i] << "' involved in " + << ncounts[i] << " proposed recoding operations," << std::endl; + } + } + if (invalid) { + std::cerr << "Error: invalid recoding scheme. Exiting." << std::endl; + exit(0); + } +} + + +// convert sequence to uppercase first +std::string SequenceRecoder::get_recoded_seq (const std::string& origseq) { + std::string seq = origseq; + seq = string_to_upper(seq); + recode_seq(seq); + return seq; +} + + +void SequenceRecoder::recode_seq (std::string& s) { + if (R_) { + s = std::regex_replace (s, r_, "R"); + } + if (Y_) { + s = std::regex_replace (s, y_, "Y"); + } + if (S_) { + s = std::regex_replace (s, s_, "S"); + } + if (W_) { + s = std::regex_replace (s, w_, "W"); + } + if (M_) { + s = std::regex_replace (s, m_, "M"); + } + if (K_) { + s = std::regex_replace (s, k_, "K"); + } + if (B_) { + s = std::regex_replace (s, b_, "B"); + } + if (D_) { + s = std::regex_replace (s, d_, "D"); + } + if (H_) { + s = std::regex_replace (s, h_, "H"); + } + if (V_) { + s = std::regex_replace (s, v_, "V"); + } +} diff --git a/src/recode.h b/src/recode.h new file mode 100644 index 0000000..b020bf7 --- /dev/null +++ b/src/recode.h @@ -0,0 +1,51 @@ +#ifndef PX_RECODE_H +#define PX_RECODE_H + +#include +#include +#include + +class SequenceRecoder { + +public: + std::string recodescheme_; + + // individual coding scheme + bool R_; + bool Y_; + bool S_; + bool W_; + bool M_; + bool K_; + bool B_; + bool D_; + bool H_; + bool V_; + bool A_; + bool C_; + bool G_; + bool T_; + + static std::set recognized_; + + static std::regex r_; + static std::regex y_; + static std::regex s_; + static std::regex w_; + static std::regex m_; + static std::regex k_; + static std::regex b_; + static std::regex d_; + static std::regex h_; + static std::regex v_; + + explicit SequenceRecoder (std::string& recodescheme); + void parse_scheme (); + void check_valid_scheme (); + std::string get_recoded_seq (const std::string& origseq); + void recode_seq (std::string& s); + + //~SequenceRecoder (); +}; + +#endif /* PX_RECODE_H */ diff --git a/src/relabel.cpp b/src/relabel.cpp new file mode 100644 index 0000000..6d52798 --- /dev/null +++ b/src/relabel.cpp @@ -0,0 +1,145 @@ +#include +#include +#include + +#include "relabel.h" +#include "tree.h" +#include "utils.h" +#include "sequence.h" + + +Relabel::Relabel (const std::string& cnamesf, const std::string& nnamesf, + const bool& verbose):num_taxa_(0) { + store_name_lists (cnamesf, nnamesf); + verbose_ = verbose; +} + + +void Relabel::store_name_lists (const std::string& cnamesf, + const std::string& nnamesf) { + std::vector terp; + std::string line; + int ccount = 0; + int ncount = 0; + + std::ifstream ifc(cnamesf.c_str()); + while (getline (ifc, line)) { + if (!line.empty()) { + ccount++; + terp.push_back(line); + } + } + ifc.close(); + old_names_ = terp; + terp.clear(); + + // check all current names are unique (otherwise won't work with existing map) + std::set orig(old_names_.begin(), old_names_.end()); + if (orig.size() < old_names_.size()) { + std::cerr << "Error: the current name list contains duplicates. Exiting." + << std::endl; + exit(0); + } + + // TODO: clean names to make them jointly newick/nexus compliant + // should we 'correct' invalid names? or leave it to user? + // can use get_valid_newick_label or get_valid_nexus_label from utils.cpp + // downside: if we change these, will not match what the user expects downstream + // quotes should be ok if spaces are the issue + + std::ifstream ifn(nnamesf.c_str()); + while (getline (ifn, line)) { + if (!line.empty()) { + ncount++; + terp.push_back(line); + } + } + ifn.close(); + new_names_ = terp; + + if (ccount != ncount) { + std::cerr << "Error: the current (" << ccount << ") and new (" << ncount + << ") lists differ in length. Exiting." << std::endl; + exit(0); + } else { + num_taxa_ = static_cast(old_names_.size()); + for (size_t i = 0; i < static_cast(num_taxa_); i++) { + name_map_[old_names_[i]] = new_names_[i]; + } + } + /* + for (map::const_iterator it = name_map_.begin(); it != name_map_.end(); ++it) { + std::cout << it->first << " " << it->second << std::endl; + } + */ +} + + +// if verbose, will report the failed matches +void Relabel::relabel_tree (Tree * tr) { + // keep track of matches + std::set orig(old_names_.begin(), old_names_.end()); + for (unsigned int i = 0; i < tr->getExternalNodeCount(); i++) { + std::string str = tr->getExternalNode(i)->getName(); + if (name_map_.find(str) != name_map_.end()) { + //std::cout << "Tree label '" << str << "' found in name list!" << std::endl; + tr->getExternalNode(i)->setName(name_map_[str]); + orig.erase(str); + } else { + // see if it is quotes that is messing us up + replace_all(str, "'", ""); + if (name_map_.find(str) != name_map_.end()) { + //std::cout << "Found it (" << str << ") this time!" << std::endl; + tr->getExternalNode(i)->setName(name_map_[str]); + orig.erase(str); + } + } + } + // do internal labels as well. be quieter here (don't expect internal nodes to have labels) + for (unsigned int i = 0; i < tr->getInternalNodeCount(); i++) { + std::string str = tr->getInternalNode(i)->getName(); + if (str.empty()) { + continue; + } + if (name_map_.find(str) != name_map_.end()) { + //std::cout << "Tree label '" << str << "' found in name list!" << std::endl; + tr->getInternalNode(i)->setName(name_map_[str]); + } else { + // see if it is quotes that is messing us up + replace_all(str, "'", ""); + if (name_map_.find(str) != name_map_.end()) { + //std::cout << "Found it this time!" << std::endl; + tr->getInternalNode(i)->setName(name_map_[str]); + orig.erase(str); + } + } + } + + // report failed matches (if present) + if (!orig.empty()) { + if (verbose_) { + std::cerr << "The following names to match were not found in the tree:" + << std::endl; + for (const auto & elem : orig) { + std::cerr << elem << std::endl; + } + } + } +} + + +// now returns a boolean indicating success +bool Relabel::relabel_sequence (Sequence& seq) { + std::string str = seq.get_id(); + if (name_map_.find(str) != name_map_.end()) { + seq.set_id(name_map_[str]); + return true; + } + return false; +} + + +std::set Relabel::get_names_to_replace () const { + std::set orig(old_names_.begin(), old_names_.end()); + return orig; +} diff --git a/src/relabel.h b/src/relabel.h new file mode 100644 index 0000000..de30878 --- /dev/null +++ b/src/relabel.h @@ -0,0 +1,28 @@ +#ifndef PX_RELABEL_TREE_H +#define PX_RELABEL_TREE_H + +#include +#include +#include + +class Tree; // forward declaration +class Sequence; // forward declaration + +class Relabel { +private: + int num_taxa_; + std::vector old_names_; + std::vector new_names_; + std::map name_map_; + bool verbose_; + + void store_name_lists (const std::string& cnamesf, const std::string& nnamesf); + +public: + Relabel (const std::string& cnamesf, const std::string& nnamesf, const bool& verbose); + void relabel_tree (Tree * tr); + bool relabel_sequence (Sequence& seq); + std::set get_names_to_replace () const; +}; + +#endif /* PX_RELABEL_TREE_H */ diff --git a/src/run_tests.py b/src/run_tests.py new file mode 100644 index 0000000..c7c0f4b --- /dev/null +++ b/src/run_tests.py @@ -0,0 +1,610 @@ +import sys +import os +import subprocess + +class bcolors: + HEADER = '\033[95m' + OKBLUE = '\033[94m' + OKGREEN = '\033[92m' + WARNING = '\033[93m' + FAIL = '\033[91m' + ENDC = '\033[0m' + BOLD = '\033[1m' + UNDERLINE = '\033[4m' + +pass_count = 0 +fail_count = 0 + +def check_individual_results(cm, t): + p = subprocess.Popen(cm, shell=True, stdout=subprocess.PIPE) + x = p.communicate() + #print(x) + x = x[0].lstrip().decode("utf-8") + if x == t: + print(bcolors.OKGREEN + "PASSED" + bcolors.ENDC) + global pass_count + pass_count += 1 + return True + else: + for i,j in zip(x,t): + print(i, j, i == j) + print(bcolors.FAIL + "FAILED" + bcolors.ENDC) + print("intended output:\n", t) + print("your output:\n", x) + global fail_count + fail_count += 1 + return False + +def print_success(res): + if res: + print(bcolors.OKBLUE + "PASSED" + bcolors.ENDC) + else: + print(bcolors.FAIL + "FAILED" + bcolors.ENDC) + +def test_program(name): + x = None + t = None + print("TESTING", name) + if name == "pxaa2cdn": + cm = "./pxaa2cdn -a TEST/AA.fa -n TEST/un_aln_nuc.fa" + t = '>Sequence1\nATG---AAA---AAG\n>Sequence2\nATG------------\n>Sequence3\nATGATGATGATGATG\n>Sequence5\nATGATGATGATGATG\n' + elif name == "pxbdfit": + res = True + print("yule ", end = '') + cm = "./pxbdfit -t TEST/ultra_100.tre -m yule" + t = 'ntips: 10\nnspeciation: 8\ntreelength: 8.67581\nrootheight: 1.74148\nmodel: yule\nlikelihood: 4.15305\naic: -6.3061\naicc: -5.8061\nb: 0.922104\n' + if not check_individual_results(cm, t): + res = False + print("birth-death ", end = '') + cm = "./pxbdfit -t TEST/ultra_100.tre -m bd" + t = 'ntips: 10\nnspeciation: 8\ntreelength: 8.67581\nrootheight: 1.74148\nmodel: bd\nlikelihood: 4.18076\naic: -4.36152\naicc: -2.64723\nb: 1.05759\nd: 0.319273\nr (b-d): 0.738315\ne (d/b): 0.301888\n' + if not check_individual_results(cm, t): + res = False + print("best ", end = '') + cm = "./pxbdfit -t TEST/ultra_100.tre" + t = 'ntips: 10\nnspeciation: 8\ntreelength: 8.67581\nrootheight: 1.74148\nmodel: bd\nlikelihood: 4.18076\naic: -4.36152\naicc: -2.64723\nb: 1.05759\nd: 0.319273\nr (b-d): 0.738315\ne (d/b): 0.301888\n' + if not check_individual_results(cm, t): + res = False + print_success(res) + return res + elif name == "pxbdsim": + res = True + print("taxon stop ", end = '') + cm = "./pxbdsim -e 5 -x 1" + t = '((taxon_1:0.3085569342610965,taxon_2:0.3085569342610965):0.6313710462719906,(taxon_3:0.9385183995956337,(taxon_4:0.5397758496988591,taxon_5:0.5397758496988591):0.3987425498967747):0.0014095809374534);\n' + if not check_individual_results(cm, t): + res = False + print("time stop ", end = '') + cm = "./pxbdsim -t 5.1 -b 1.0 -d 0.75 -x 13" + t = '(((((((taxon_5:0.2681437034262011,taxon_6:0.2681437034262011):0.7248133092430473,taxon_7:0.9929570126692484):0.484015158328142,(taxon_9:0.1548517152534084,taxon_10:0.1548517152534084):1.3221204557439821):0.1479365605447183,taxon_2:1.6249087315421087):0.3184946310577623,(taxon_13:1.9010749464536811,(taxon_18:0.3606589757369143,taxon_16:0.3606589757369143):1.5404159707167668):0.0423284161461899):0.7845989205099899,(taxon_20:0.1465475069334055,taxon_21:0.1465475069334055):2.5814547761764555):1.9711428334481687,taxon_35:4.6991451165580296);\n' + if not check_individual_results(cm, t): + res = False + print_success(res) + return res + elif name == "pxboot": + res = True + print("bootstrap ", end = '') + cm = "./pxboot -s TEST/test.fa -x 1" + t = '>TaxonA\nAAATTCCCCCTGCCCTTTTA\n>TaxonB\nGCTCCGGGGGGCCCCAAGAC\n>TaxonC\nACGCCCCCCCCTAAAAAATA\n>TaxonD\nTCCTTTTTTTAATTCGGGTG\n>TaxonE\nTTACCTTTTTCCCCCGGCCG\n' + if not check_individual_results(cm, t): + res = False + print("jackknife ", end = '') + cm = "./pxboot -s TEST/test.fa -x 13 -f 0.5" + t = '>TaxonA\nGCTATTCATCT\n>TaxonB\nCCCCGGGGCAG\n>TaxonC\nTATCACCACAT\n>TaxonD\nACCCGATTTCT\n>TaxonE\nCCCTCCTTCCT\n' + if not check_individual_results(cm, t): + res = False + print_success(res) + return res + elif name == "pxbp": + cm = "./pxbp -t TEST/test.tre" + t = '1 trees \n3 unique clades found\nCLADE: TaxonA TaxonB FREQ: 1. ICA: 1. COUNT: 1 TREEFREQ: 1.\nCLADE: TaxonA TaxonB TaxonC FREQ: 1. ICA: 1. COUNT: 1 TREEFREQ: 1.\nCLADE: TaxonD TaxonE FREQ: 1. ICA: 1. COUNT: 1 TREEFREQ: 1.\nTSCA: 3\n' + elif name == "pxcat": + cm = "./pxcat -s TEST/test.fa TEST/protein_matrices/AA_5tax_interleaved.NEX TEST/phylip_examples/spaces_int.phy" + t = '>TaxonA\nAAATTTCCCTGTCCCTTTAAQVFTHNEVNCRWHIEKGILTHEPLDHFDAHNHHILANNVETPVIYRPLWWRTRKAMDMWFLKSSMHWDFQENFDTMAYSMHAPQQQSKHSAHYRQQVNNLRRFIQPQMGHGRKMNNKQGCRMHYFIAYASLQFNSLYHAEMLKQLWTGGLDFSGEKSMPNWAKMSGESEGWSHWVLMLMRNYYRHGKLHGCSHRKEILESEKLRRIGIMRWWKQYAFKVRDISGYRFDRGYFGCKTLLNDAGCKVNCNWPAAATTTCCCTGTCCCTTTAA\n>TaxonB\nGCTCGAGGGGCCCCAAGACCQVFYHNEVNCRWINEKGILTHEPLDHFDAHNQHILANNVETPVIYRPLWWRTRKAMDRWFYKTSVHWDFQERFDTHGYSMVAPQQQSCNRAEYRQVVNNLRRFIQPQDGHGRKMNVKQGCRMHYFIARASLEFNSGYHAEYLKQLWLGGLDFSGEKSMLNWAKMSGESEGWSHWVYMLMRNYYRHGKLHGCSHRKEALESEKLRCIGIMRWWKQYAFKVRDISGYRFDRCYLICKTLLYDDGCKANCNWPGCTCGAGGGGCCCCAAGACC\n>TaxonC\nACGCTCCCCCTTAAAAATGAQVFYATEVNFRDIGSEGFLTCEFLDHFDAHEEKLLHNYVEKPWIEEPLWWRTRKRDDMYFSYHWDFLDFQENFDMHAYSMVMPQQHSYRFGEYRQVVNNLYYFNAGPMGHRQKMNNKQGCRMHYFIAYAQAQFNSGYHAEYLKMLSTGGLDLSGESSDPNWAKMSGESEGWSHWVAMLMRNYYRHGKSHGCKMFKHAYESEKLRCIGISSSGDQYCFTVRDSSGYRFDACVLECKTSLAACGHNANCGWPACGCTCCCCCTTAAAAATGA\n>TaxonD\nTCCTTGTTCAACTCCGGTGGHWPYHNEWNQRGWGVFRYLTHEFMCHQHRLFYHICHNYDHGPTTERFKAITTWTAQDRWKSGHSVHGDFQENFCTYGMKMRFQNQHSCNRHIGRRLQNNLRFNYCYCQIKRYKGNKCQFVQLKVDIHDKSLAANLIAASMYLRHMWFGPLTPYGFAVPPNWMMVSGPSFGKSWHMQIQIRNAYVTWKYRGKGYSICQSPQNKLMWPNRYWMIEIYTFIVTDIRTALFIQISLSEYAFSCDFIPRQDMNWQTCCTTGTTCAACTCCGGTGG\n>TaxonE\nTTACTATTCCCCCCCGCCGGAWWYHNTLNCRGWGEFRYLTHEFCCHWGNAFYHICHNYDNGPTTERFLTIQTWTARDRWCCKHSVHWNFQENFSTYGLKQRFQNQHSCNRHIVRQLWNNLRFFICICQIKRGKGNKCQFCILHYFIHLPSLACRLSYAFGYLRHNWFGTLTPYGFASPPNWYMRSEPSFGNSWNMAIQIANAFRTWKYRECGYSIKQSCDSTLMWPHRYWMIAQYTFQVTDSRTYDFITSSLVVYAFLCDAQARADCIDQTTACTATTCCCCCCCGCCGG\n' + elif name == "pxclsq": + res = True + print("delete sites ", end = '') + cm = "./pxclsq -s TEST/Alignment -p 0.6" + t = '>Sequence1\nAAATTTCCCTTTCCCTTTAAAAAATTTCCCTTTCCCTTTAAA\n>Sequence2\nGGGGGGGGGGCCCCCCCCCCAGGGGGGGGGGCCCCCCCCCCA\n>Sequence3\nCCCCCCCCCCCCAAAAAAAAACCCCCCCCCCCCAAAAAAAAA\n>Sequence9\nAAATTTCCCTTTCCCTTTAAAAAATTTCCCTTTCCCTTTAAA\n>Sequence10\nGGGGGGGGGGCCCCCCCCCCAGGGGGGGGGGCCCCCCCCCCA\n>Sequence11\nCCCCCCCCCCCCAAAAAAAAACCCCCCCCCCCCAAAAAAAAA\n>Sequence8\nTTTTTTTTCCCCCCCGGGGGATTTTTTTTCCCCCCCGGGGGA\n' + if not check_individual_results(cm, t): + res = False + print("info by taxon ", end = '') + cm = "./pxclsq -s TEST/Alignment -i -t" + t = 'Length of sequences: 82 characters\nTaxon Missing Prop.\n------------------------------------\nSequence1 0 0\nSequence2 0 0\nSequence3 0 0\nSequence4 42 0.512195\nSequence9 40 0.487805\nSequence10 40 0.487805\nSequence11 40 0.487805\nSequence8 40 0.487805\n' + if not check_individual_results(cm, t): + res = False + print_success(res) + return res + elif name == "pxcltr": + res = True + print("all ", end = '') + cm = "./pxcltr -t TEST/figtree.tre" + t = '((((((((((Acanthisitta:59.5193727309717602,((((Vidua:22.6182549004527154,Picathartes:22.6182549004527154):4.9009303834641216,Corvus:27.5191852839168369):9.2536731454940906,Menura:36.7728584294109169):8.4420208400820016,(Dendrocolaptes:35.3961203393474904,Sapayoa:35.3961203393474904):9.8187589301454139):14.3044934614788488):10.7748334139107271,(Platycercus:40.0281091281313834,Cacatua:40.0281091281313834):30.2660970167511039):4.4587322613926119,((Daptrius:38.2572365058785309,Falco:38.2572365058785309):21.5464257679351547,Micrastur:59.8036622738136927):14.9492761324614136):1.5291784870669858,Cariama:76.2821168933420921):1.7216938014130534,(((((((Todus:60.7013555283992616,Brachypteracias:60.7013555283992616):5.7508807513454414,Galbula:66.4522362797447101):4.4488614861600126,Tockus:70.9010977659047228):2.216948125952598,Trogon:73.1180458918573066):1.5161563415550319,Leptosomus:74.6342022334123527):1.1276714400573553,((Colius:30.2733624411755677,Urocolius:30.2733624411755677):42.5451975111996461,((Phodilus:50.1106605525312929,Tyto:50.1106605525312929):12.2899256666875729,Speotyto:62.4005862192188658):10.4179737331563302):2.9433137210945119):0.8406056023289636,((Buteo:56.7517771915700493,Pandion:56.7517771915700493):15.5516984707221511,Cathartes:72.3034756622922004):4.2990036135064855):1.4013314189564596):1.0276414826621334,((Arenaria:56.3951097085813871,Larus:56.3951097085813871):13.1454394615530177,Haematopus:69.5405491701344118):9.4909030072828671):1.2181587948254702,((((((((Anhinga:59.8569106706207137,Fregata:59.8569106706207137):7.5720611901585926,(Balaeniceps:45.4587379089424104,Pelecanus:45.4587379089424104):21.9702339518369172):3.3980479603686149,Ciconia:70.8270198211479283):2.1448079148853196,((Puffinus:61.9603862624734916,Oceanites:61.9603862624734916):9.1268276876270349,Eudyptula:71.0872139501005194):1.8846137859327143):2.8157199910723989,Gavia:75.7875477271056468):0.9540458767609721,Tauraco:76.7415936038666189):0.8679843349123075,((((Grus:51.9285514272868909,Psophia:51.9285514272868909):14.0376559938998682,Heliornis:65.966207421186752):7.386107234187179,(Coccyzus:46.3876197971255806,Geococcyx:46.3876197971255806):26.9646948582483503):2.4525290405429416,(Choriotis:23.3726820748962751,Eupodotis:23.3726820748962751):52.4321616210206045):1.8047342428620539):0.9528590555748337,Opisthocomus:78.5624369943537602):1.6871739778889889):1.5969007841221128,(((((Aegotheles:71.0907918755163735,((Streptoprocne:57.3224341397834678,Hemiprocne:57.3224341397834678):5.9801764374741353,Colibri:63.3026105772576031):7.7881812982587633):2.2191066355752156,Caprimulgus:73.3098985110915891):3.1721034032586743,(Nyctibius_gr:67.1418428139748045,Steatornis:67.1418428139748045):9.3401591003754589):1.1922948731627798,(Eurypyga:44.7436010092943945,Rhynochetos:44.7436010092943945):32.9306957782186487):1.6375361940638982,(((((Geotrygon:17.955128614773546,Otidiphaps:17.955128614773546):41.4025831377661149,(Mesitornis:30.5363877534961041,Monias:30.5363877534961041):28.8213239990435603):8.8140467330380901,(Pterocles:23.248849928737279,Syrrhaptes:23.248849928737279):44.9229085568404827):3.6394441298017881,Phaethon_le:71.8112026153795568):4.7318002096549492,(Phoenicopterus:46.8102884964044321,Podiceps:46.8102884964044321):29.7327143286300597):2.7688301565424496):2.5346787747879205):12.1692101452984787,((Megapodius:57.6199055615797704,Gallus:57.6199055615797704):21.9373206132001357,((Anas:75.311728856484649,Anseranas:75.311728856484649):1.6600967378572022,Chauna:76.9718255943418512):2.585400580438062):14.4584957268834273):8.9369110714444417,((((Apteryx:67.0034573097872084,(Casuarius:32.1214384242075894,Dromaius:32.1214384242075894):34.8820188855796189):7.1368013410298374,(Tinamus:27.6367201876039204,Eudromia:27.6367201876039204):46.5035384632131326):1.9804044712445403,Rhea:76.1206631220615861):2.2978942387944272,Struthio:78.4185573608560276):24.5340756122517689);\n' + if not check_individual_results(cm, t): + res = False + print("labels ", end = '') + cm = "./pxcltr -t TEST/figtree.tre -l" + t = '(((((((((((Acanthisitta:59.5193727309717602,((((Vidua:22.6182549004527154,Picathartes:22.6182549004527154):4.9009303834641216,Corvus:27.5191852839168369):9.2536731454940906,Menura:36.7728584294109169):8.4420208400820016,(Dendrocolaptes:35.3961203393474904,Sapayoa:35.3961203393474904):9.8187589301454139):14.3044934614788488):10.7748334139107271,(Platycercus:40.0281091281313834,Cacatua:40.0281091281313834):30.2660970167511039):4.4587322613926119,((Daptrius:38.2572365058785309,Falco:38.2572365058785309):21.5464257679351547,Micrastur:59.8036622738136927):14.9492761324614136):1.5291784870669858,Cariama:76.2821168933420921):1.7216938014130534,(((((((Todus:60.7013555283992616,Brachypteracias:60.7013555283992616):5.7508807513454414,Galbula:66.4522362797447101):4.4488614861600126,Tockus:70.9010977659047228):2.216948125952598,Trogon:73.1180458918573066):1.5161563415550319,Leptosomus:74.6342022334123527):1.1276714400573553,((Colius:30.2733624411755677,Urocolius:30.2733624411755677):42.5451975111996461,((Phodilus:50.1106605525312929,Tyto:50.1106605525312929):12.2899256666875729,Speotyto:62.4005862192188658):10.4179737331563302):2.9433137210945119):0.8406056023289636,((Buteo:56.7517771915700493,Pandion:56.7517771915700493):15.5516984707221511,Cathartes:72.3034756622922004):4.2990036135064855):1.4013314189564596):1.0276414826621334,((Arenaria:56.3951097085813871,Larus:56.3951097085813871):13.1454394615530177,Haematopus:69.5405491701344118):9.4909030072828671):1.2181587948254702,((((((((Anhinga:59.8569106706207137,Fregata:59.8569106706207137):7.5720611901585926,(Balaeniceps:45.4587379089424104,Pelecanus:45.4587379089424104):21.9702339518369172):3.3980479603686149,Ciconia:70.8270198211479283):2.1448079148853196,((Puffinus:61.9603862624734916,Oceanites:61.9603862624734916):9.1268276876270349,Eudyptula:71.0872139501005194):1.8846137859327143):2.8157199910723989,Gavia:75.7875477271056468):0.9540458767609721,Tauraco:76.7415936038666189):0.8679843349123075,((((Grus:51.9285514272868909,Psophia:51.9285514272868909):14.0376559938998682,Heliornis:65.966207421186752):7.386107234187179,(Coccyzus:46.3876197971255806,Geococcyx:46.3876197971255806):26.9646948582483503):2.4525290405429416,(Choriotis:23.3726820748962751,Eupodotis:23.3726820748962751):52.4321616210206045):1.8047342428620539):0.9528590555748337,Opisthocomus:78.5624369943537602):1.6871739778889889):1.5969007841221128,(((((Aegotheles:71.0907918755163735,((Streptoprocne:57.3224341397834678,Hemiprocne:57.3224341397834678):5.9801764374741353,Colibri:63.3026105772576031):7.7881812982587633):2.2191066355752156,Caprimulgus:73.3098985110915891):3.1721034032586743,(Nyctibius_gr:67.1418428139748045,Steatornis:67.1418428139748045):9.3401591003754589):1.1922948731627798,(Eurypyga:44.7436010092943945,Rhynochetos:44.7436010092943945):32.9306957782186487):1.6375361940638982,(((((Geotrygon:17.955128614773546,Otidiphaps:17.955128614773546):41.4025831377661149,(Mesitornis:30.5363877534961041,Monias:30.5363877534961041):28.8213239990435603):8.8140467330380901,(Pterocles:23.248849928737279,Syrrhaptes:23.248849928737279):44.9229085568404827):3.6394441298017881,Phaethon_le:71.8112026153795568):4.7318002096549492,(Phoenicopterus:46.8102884964044321,Podiceps:46.8102884964044321):29.7327143286300597):2.7688301565424496):2.5346787747879205):12.1692101452984787,((Megapodius:57.6199055615797704,Gallus:57.6199055615797704):21.9373206132001357,((Anas:75.311728856484649,Anseranas:75.311728856484649):1.6600967378572022,Chauna:76.9718255943418512):2.585400580438062):14.4584957268834273):8.9369110714444417,((((Apteryx:67.0034573097872084,(Casuarius:32.1214384242075894,Dromaius:32.1214384242075894):34.8820188855796189):7.1368013410298374,(Tinamus:27.6367201876039204,Eudromia:27.6367201876039204):46.5035384632131326):1.9804044712445403,Rhea:76.1206631220615861):2.2978942387944272,Struthio:78.4185573608560276):24.5340756122517689):100);\n' + if not check_individual_results(cm, t): + res = False + print("knuckles ", end = '') + cm = "./pxcltr -t TEST/figtree.tre -k" + t = '(((((((((((Acanthisitta:59.5193727309717602,((((Vidua:22.6182549004527154,Picathartes:22.6182549004527154):4.9009303834641216,Corvus:27.5191852839168369):9.2536731454940906,Menura:36.7728584294109169):8.4420208400820016,(Dendrocolaptes:35.3961203393474904,Sapayoa:35.3961203393474904):9.8187589301454139):14.3044934614788488):10.7748334139107271,(Platycercus:40.0281091281313834,Cacatua:40.0281091281313834):30.2660970167511039):4.4587322613926119,((Daptrius:38.2572365058785309,Falco:38.2572365058785309):21.5464257679351547,Micrastur:59.8036622738136927):14.9492761324614136):1.5291784870669858,Cariama:76.2821168933420921):1.7216938014130534,(((((((Todus:60.7013555283992616,Brachypteracias:60.7013555283992616):5.7508807513454414,Galbula:66.4522362797447101):4.4488614861600126,Tockus:70.9010977659047228):2.216948125952598,Trogon:73.1180458918573066):1.5161563415550319,Leptosomus:74.6342022334123527):1.1276714400573553,((Colius:30.2733624411755677,Urocolius:30.2733624411755677):42.5451975111996461,((Phodilus:50.1106605525312929,Tyto:50.1106605525312929):12.2899256666875729,Speotyto:62.4005862192188658):10.4179737331563302):2.9433137210945119):0.8406056023289636,((Buteo:56.7517771915700493,Pandion:56.7517771915700493):15.5516984707221511,Cathartes:72.3034756622922004):4.2990036135064855):1.4013314189564596):1.0276414826621334,((Arenaria:56.3951097085813871,Larus:56.3951097085813871):13.1454394615530177,Haematopus:69.5405491701344118):9.4909030072828671):1.2181587948254702,((((((((Anhinga:59.8569106706207137,Fregata:59.8569106706207137):7.5720611901585926,(Balaeniceps:45.4587379089424104,Pelecanus:45.4587379089424104):21.9702339518369172):3.3980479603686149,Ciconia:70.8270198211479283):2.1448079148853196,((Puffinus:61.9603862624734916,Oceanites:61.9603862624734916):9.1268276876270349,Eudyptula:71.0872139501005194):1.8846137859327143):2.8157199910723989,Gavia:75.7875477271056468):0.9540458767609721,Tauraco:76.7415936038666189):0.8679843349123075,((((Grus:51.9285514272868909,Psophia:51.9285514272868909):14.0376559938998682,Heliornis:65.966207421186752):7.386107234187179,(Coccyzus:46.3876197971255806,Geococcyx:46.3876197971255806):26.9646948582483503):2.4525290405429416,(Choriotis:23.3726820748962751,Eupodotis:23.3726820748962751):52.4321616210206045):1.8047342428620539):0.9528590555748337,Opisthocomus:78.5624369943537602):1.6871739778889889):1.5969007841221128,(((((Aegotheles:71.0907918755163735,((Streptoprocne:57.3224341397834678,Hemiprocne:57.3224341397834678):5.9801764374741353,Colibri:63.3026105772576031):7.7881812982587633):2.2191066355752156,Caprimulgus:73.3098985110915891):3.1721034032586743,(Nyctibius_gr:67.1418428139748045,Steatornis:67.1418428139748045):9.3401591003754589):1.1922948731627798,(Eurypyga:44.7436010092943945,Rhynochetos:44.7436010092943945):32.9306957782186487):1.6375361940638982,(((((Geotrygon:17.955128614773546,Otidiphaps:17.955128614773546):41.4025831377661149,(Mesitornis:30.5363877534961041,Monias:30.5363877534961041):28.8213239990435603):8.8140467330380901,(Pterocles:23.248849928737279,Syrrhaptes:23.248849928737279):44.9229085568404827):3.6394441298017881,Phaethon_le:71.8112026153795568):4.7318002096549492,(Phoenicopterus:46.8102884964044321,Podiceps:46.8102884964044321):29.7327143286300597):2.7688301565424496):2.5346787747879205):12.1692101452984787,((Megapodius:57.6199055615797704,Gallus:57.6199055615797704):21.9373206132001357,((Anas:75.311728856484649,Anseranas:75.311728856484649):1.6600967378572022,Chauna:76.9718255943418512):2.585400580438062):14.4584957268834273):8.9369110714444417,((((Apteryx:67.0034573097872084,(Casuarius:32.1214384242075894,Dromaius:32.1214384242075894):34.8820188855796189):7.1368013410298374,(Tinamus:27.6367201876039204,Eudromia:27.6367201876039204):46.5035384632131326):1.9804044712445403,Rhea:76.1206631220615861):2.2978942387944272,Struthio:78.4185573608560276):24.5340756122517689):100);\n' + if not check_individual_results(cm, t): + res = False + print_success(res) + return res + elif name == "pxcolt": + res = True + print("probability support ", end = '') + cm = "./pxcolt -t TEST/collapse/prob_support.tre -l 0.7" + t = '((TaxonC:0.25,TaxonA:0.225,TaxonB:0.155)1.0:0.4,(TaxonD:0.23,TaxonE:0.16)0.94:0.3);\n' + if not check_individual_results(cm, t): + res = False + print("integer support ", end = '') + cm = "./pxcolt -t TEST/collapse/integer_support.tre -l 0.7" + t = '((TaxonC:0.25,TaxonA:0.225,TaxonB:0.155)100:0.4,(TaxonD:0.23,TaxonE:0.16)94:0.3);\n' + if not check_individual_results(cm, t): + res = False + print("real support ", end = '') + cm = "./pxcolt -t TEST/collapse/real_support.tre -l 0.7" + t = '((TaxonC:0.25,TaxonA:0.225,TaxonB:0.155)99.9:0.4,(TaxonD:0.23,TaxonE:0.16)94.7:0.3);\n' + if not check_individual_results(cm, t): + res = False + print_success(res) + return res + elif name == "pxcomp": + cm = "./pxcomp -s TEST/test.fa" + t = 'Observed character counts:\n A C G T Nchar\nTaxonA 5 6 1 8 20\nTaxonB 4 8 7 1 20\nTaxonC 7 7 2 4 20\nTaxonD 2 6 5 7 20\nTaxonE 2 10 3 5 20\nTotal 20 37 18 25 100\nchi-square test stat. = 18.458\ndf = 12\nprob = 0.102476\n' + elif name == "pxconsq": + cm = "./pxconsq -s TEST/test.fa" + t = '>consensus\nDHNYKNBBSNNYHMMDNHVV\n' + elif name == "pxcontrates": + cm = "./pxcontrates -c TEST/contrates_file.txt -t TEST/contrates_tree.tre" + t = '#nexus\nbegin trees;\ntree tree0 = ((((s1[&value=100.000000000]:0.360355,s2[&value=100.000000000]:0.360355)[&value=100.892125727]:0.896878,s3[&value=120.000000000]:1.25723)[&value=105.332899025]:0.420755,(((s4[&value=110.000000000]:0.119033,s5[&value=80.000000000]:0.119033)[&value=93.952153267]:0.0254417,s6[&value=90.000000000]:0.144475)[&value=93.504227541]:0.764764,s7[&value=100.000000000]:0.909239)[&value=98.589114242]:0.768749)[&value=102.507614350]:0.0634916,((s8[&value=100.000000000]:0.310689,s9[&value=100.000000000]:0.310689)[&value=100.154669043]:0.103151,s10[&value=100.000000000]:0.41384)[&value=100.257371380]:1.32764)[&value=102.404912715];\ntree tree1 = ((((s1[&value=19.000000000]:0.360355,s2[&value=18.000000000]:0.360355)[&value=18.086986419]:0.896878,s3[&value=17.000000000]:1.25723)[&value=16.031110631]:0.420755,(((s4[&value=16.000000000]:0.119033,s5[&value=15.000000000]:0.119033)[&value=15.080525602]:0.0254417,s6[&value=14.000000000]:0.144475)[&value=14.901211808]:0.764764,s7[&value=13.000000000]:0.909239)[&value=14.281614892]:0.768749)[&value=14.742377359]:0.0634916,((s8[&value=12.000000000]:0.310689,s9[&value=11.000000000]:0.310689)[&value=11.388982194]:0.103151,s10[&value=10.000000000]:0.41384)[&value=11.315264869]:1.32764)[&value=14.585963113];\ntree tree2 = ((((s1[&value=20.000000000]:0.360355,s2[&value=20.000000000]:0.360355)[&value=20.000000000]:0.896878,s3[&value=20.000000000]:1.25723)[&value=20.000000000]:0.420755,(((s4[&value=20.000000000]:0.119033,s5[&value=20.000000000]:0.119033)[&value=20.000000000]:0.0254417,s6[&value=20.000000000]:0.144475)[&value=20.000000000]:0.764764,s7[&value=20.000000000]:0.909239)[&value=20.000000000]:0.768749)[&value=20.000000000]:0.0634916,((s8[&value=20.000000000]:0.310689,s9[&value=20.000000000]:0.310689)[&value=20.000000000]:0.103151,s10[&value=20.000000000]:0.41384)[&value=20.000000000]:1.32764)[&value=20.000000000];\nend;\n\n' + elif name == "pxfqfilt": + cm = "./pxfqfilt -m 20 -s TEST/test.fastq | wc -l" + t = "3872\n" + elif name == "pxlog": + res = True + print("count trees ", end = '') + cm = "./pxlog -t TEST/run1.trees TEST/run2.trees -i" + t = 'TEST/run1.trees: 101 trees.\nTEST/run2.trees: 151 trees.\nCounted 252 total tree samples across 2 files.\n' + if not check_individual_results(cm, t): + res = False + print("tree log ", end = '') + cm = "./pxlog -t TEST/run1.trees TEST/run2.trees -b 75 -n 2" + t = '#NEXUS\n\nBegin taxa;\n Dimensions ntax=33;\n Taxlabels\n 113_V_gryphus\n 128_C_burrovianus\n 135_C_aura\n 31_C_melambrotus\n 6_C_atratus\n 97_S_papa\n 9_G_californianus\n Anas_clypeata\n Anas_platyrhunchos\n Apterodytes_patagonicus\n Ardea_herodias\n Asio_otus\n Balaeniceps_rex\n Bonasa_umbellus\n Bucephala_abeola\n Caracara_cheriway\n Charadrius_alexandrinus\n Ciconia_maguari\n Ephippiorhynchus_senegalensis\n Falco_femoralis\n Falco_peregrinus\n Falco_rusticolus\n Fulmarus_glacialis\n Gallus_gallus\n Gavia_immer\n Gyps_bengalensis\n Larus_marinus\n Lunda_cirrhata\n Nyctanassa_violacea\n Pandion\n Pygoscelis_antarcticus\n Sagittarius\n Scopus_umbretta\n ;\nEnd;\n\nBegin trees;\n Translate\n 1 113_V_gryphus,\n 2 128_C_burrovianus,\n 3 135_C_aura,\n 4 31_C_melambrotus,\n 5 6_C_atratus,\n 6 97_S_papa,\n 7 9_G_californianus,\n 8 Anas_clypeata,\n 9 Anas_platyrhunchos,\n 10 Apterodytes_patagonicus,\n 11 Ardea_herodias,\n 12 Asio_otus,\n 13 Balaeniceps_rex,\n 14 Bonasa_umbellus,\n 15 Bucephala_abeola,\n 16 Caracara_cheriway,\n 17 Charadrius_alexandrinus,\n 18 Ciconia_maguari,\n 19 Ephippiorhynchus_senegalensis,\n 20 Falco_femoralis,\n 21 Falco_peregrinus,\n 22 Falco_rusticolus,\n 23 Fulmarus_glacialis,\n 24 Gallus_gallus,\n 25 Gavia_immer,\n 26 Gyps_bengalensis,\n 27 Larus_marinus,\n 28 Lunda_cirrhata,\n 29 Nyctanassa_violacea,\n 30 Pandion,\n 31 Pygoscelis_antarcticus,\n 32 Sagittarius,\n 33 Scopus_umbretta\n ;\ntree STATE_0 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55165.13148245269,EEF_ucld_branchRates=-266.168517335019,lnP=-55165.13148245269,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.491519171407602E-4]:1.13257396578E1,9[&rate=6.367032323998896E-4]:1.13257396578E1)[&rate=7.858985904720106E-4]:4.464111684496E0,15[&rate=4.1233866807259843E-4]:1.57898513423E1)[&rate=6.875024701695477E-4]:1.092846716327E2,(14[&rate=0.0012135271601642415]:4.944525647579E1,24[&rate=5.521552390624093E-4]:4.944525647579E1)[&rate=0.0010441679181449727]:7.562926649923E1)[&rate=9.262993402486683E-4]:1.723696214156E0,(((25[&rate=7.708275361737002E-4]:7.181708005364E1,((((30[&rate=6.121845853669823E-4]:4.985660910622E1,26[&rate=7.14127096657731E-4]:4.985660910622E1)[&rate=0.0010176993850459428]:9.995868247001E0,32[&rate=3.4625317941899754E-4]:5.985247735322E1)[&rate=4.6653751154651294E-4]:7.996827625354E0,((16[&rate=3.974271783369831E-4]:3.380740319842E1,((22[&rate=8.338699316080518E-4]:3.257441736696E0,21[&rate=7.56148400880097E-4]:3.257441736696E0)[&rate=6.367032323998896E-4]:3.227919911685E0,20[&rate=9.928761850134726E-4]:6.48536164838E0)[&rate=0.001311098279928485]:2.732204155004E1)[&rate=9.928761850134726E-4]:3.371522301258E1,((((3[&rate=3.2549049638558433E-4]:1.432620961347E0,4[&rate=0.0010441679181449727]:1.432620961347E0)[&rate=5.640993501024151E-4]:3.934199057588E-1,2[&rate=6.000746086707974E-4]:1.826040867106E0)[&rate=3.8165268046827126E-4]:9.803756223352E0,5[&rate=3.4625317941899754E-4]:1.162979709046E1)[&rate=6.617539259616744E-4]:2.042858207699E0,((7[&rate=5.521552390624093E-4]:7.913622803886E0,6[&rate=9.262993402486683E-4]:7.913622803886E0)[&rate=7.14127096657731E-4]:1.743947557529E0,1[&rate=8.68642972479051E-4]:9.657570361415E0)[&rate=7.278289091363475E-4]:4.015084936742E0)[&rate=4.535850203136672E-4]:5.384997091285E1)[&rate=4.1233866807259843E-4]:3.266787675755E-1)[&rate=0.001854090422241169]:1.851111882531E0,12[&rate=9.928761850134726E-4]:6.970041686111E1)[&rate=6.745302046339041E-4]:2.116663192535E0)[&rate=7.56148400880097E-4]:1.906772436903E0,((((33[&rate=9.473390789692693E-4]:4.850834425682E1,13[&rate=2.698812133915219E-4]:4.850834425682E1)[&rate=3.0109868906779026E-4]:2.007204490211E1,(19[&rate=8.509392570586737E-4]:1.274367209727E1,18[&rate=0.0012135271601642415]:1.274367209727E1)[&rate=2.698812133915219E-4]:5.583671706166E1)[&rate=7.858985904720106E-4]:1.489063433765E0,(11[&rate=4.7921810677827465E-4]:1.213878324424E1,29[&rate=6.000746086707974E-4]:1.213878324424E1)[&rate=8.870497241331672E-4]:5.793066934846E1)[&rate=2.698812133915219E-4]:2.53817815615E0,((10[&rate=6.745302046339041E-4]:1.574844011456E1,31[&rate=8.68642972479051E-4]:1.574844011456E1)[&rate=5.521552390624093E-4]:5.393796591546E1,23[&rate=5.521552390624093E-4]:6.968640603003E1)[&rate=4.6653751154651294E-4]:2.921224718818E0)[&rate=9.694820211563088E-4]:1.116221741701E0)[&rate=0.001854090422241169]:4.19015990179E0,(17[&rate=7.708275361737002E-4]:7.160357780666E1,(27[&rate=4.535850203136672E-4]:2.985614862999E1,28[&rate=7.278289091363475E-4]:2.985614862999E1)[&rate=0.0011364778888983934]:4.174742917667E1)[&rate=0.0011031761422500594]:6.310434585674E0)[&rate=0.0016618610145439333]:4.888420679684E1);\ntree STATE_1 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55114.92162296427,EEF_ucld_branchRates=-266.168517335019,lnP=-55114.92162296427,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.432835519837599E-4]:1.100973124427E1,9[&rate=4.8626015958343563E-4]:1.100973124427E1)[&rate=3.6454536364777235E-4]:5.649648486163E0,15[&rate=9.773747081365596E-4]:1.665937973043E1)[&rate=7.041365574460978E-4]:1.088979418912E2,(14[&rate=0.00100683793147973]:5.055464428328E1,24[&rate=5.570724333007862E-4]:5.055464428328E1)[&rate=8.238640701612584E-4]:7.500267733839E1)[&rate=0.0015473551116608954]:1.90590494296E0,(((25[&rate=6.66750193656917E-4]:7.568801303577E1,(12[&rate=6.432835519837599E-4]:7.28395630592E1,((16[&rate=2.5350035197253395E-4]:3.624643042751E1,((22[&rate=0.0018819295968046754]:3.169847917002E0,21[&rate=2.809302220991419E-4]:3.169847917002E0)[&rate=5.673801276555682E-4]:5.374182723095E0,20[&rate=4.963571768224952E-4]:8.544030640097E0)[&rate=0.0010394458163883933]:2.770239978741E1)[&rate=9.773747081365596E-4]:3.514029213497E1,(((30[&rate=7.594550785275435E-4]:4.843669821979E1,26[&rate=4.963571768224952E-4]:4.843669821979E1)[&rate=9.026669316639456E-4]:1.089160199797E1,32[&rate=3.773694205585881E-4]:5.932830021776E1)[&rate=5.570724333007862E-4]:1.015625933124E1,((((3[&rate=7.449171477244499E-4]:1.581049982656E0,4[&rate=9.773747081365596E-4]:1.581049982656E0)[&rate=8.419266792272108E-4]:5.692743077229E-1,2[&rate=4.963571768224952E-4]:2.150324290379E0)[&rate=4.2374920021226984E-4]:8.280531199389E0,5[&rate=3.509469086713054E-4]:1.043085548977E1)[&rate=6.319097002157012E-4]:3.133736605239E0,((7[&rate=3.89591068401691E-4]:8.514600229056E0,6[&rate=5.88308888642596E-4]:8.514600229056E0)[&rate=8.609824782466007E-4]:1.189340788068E0,1[&rate=7.449171477244499E-4]:9.703941017125E0)[&rate=4.2374920021226984E-4]:3.860651077882E0)[&rate=7.173032727879145E-4]:5.5919967454E1)[&rate=3.89591068401691E-4]:1.902163013473E0)[&rate=9.026669316639456E-4]:1.452840496727E0)[&rate=5.88308888642596E-4]:2.848449976572E0)[&rate=6.432835519837599E-4]:6.356517176802E-1,((((11[&rate=5.570724333007862E-4]:1.440547607658E1,29[&rate=7.745510698353868E-4]:1.440547607658E1)[&rate=5.777866535606864E-4]:5.443858763138E1,(33[&rate=7.902677421602243E-4]:5.598164503662E1,13[&rate=3.203025450350539E-4]:5.598164503662E1)[&rate=8.609824782466007E-4]:1.286241867135E1)[&rate=0.0011177048600246257]:1.20168189338E0,(19[&rate=7.902677421602243E-4]:1.397235759973E1,18[&rate=6.788925687625579E-4]:1.397235759973E1)[&rate=5.064289247136427E-4]:5.607338800162E1)[&rate=2.0843238030718346E-4]:3.542968383984E0,((10[&rate=6.097700838501141E-4]:1.417768651896E1,31[&rate=8.419266792272108E-4]:1.417768651896E1)[&rate=2.5350035197253395E-4]:5.807526881403E1,23[&rate=3.89591068401691E-4]:7.225295533299E1)[&rate=6.548891178634315E-4]:1.335758652342E0)[&rate=3.0224038688422003E-4]:2.734950768121E0)[&rate=4.2374920021226984E-4]:4.723307623727E0,(17[&rate=6.66750193656917E-4]:7.3448718883E1,(27[&rate=3.0224038688422003E-4]:3.512903799491E1,28[&rate=5.064289247136427E-4]:3.512903799491E1)[&rate=6.207454408416914E-4]:3.83196808881E1)[&rate=7.902677421602243E-4]:7.598253494177E0)[&rate=0.0015473551116608954]:4.641625418744E1);\ntree STATE_2 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55129.87052347309,EEF_ucld_branchRates=-266.168517335019,lnP=-55129.87052347309,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.066097019294435E-4]:1.07568141584E1,9[&rate=8.67989763853159E-4]:1.07568141584E1)[&rate=4.6356073087012426E-4]:9.37125547926E0,15[&rate=2.2676083374627897E-4]:2.012806963766E1)[&rate=8.67989763853159E-4]:9.872108264778E1,(14[&rate=0.0013676113136323678]:4.245714471267E1,24[&rate=9.80288710297613E-4]:4.245714471267E1)[&rate=8.020875789748006E-4]:7.639200757277E1)[&rate=5.633341908903434E-4]:6.884003169277E0,((((12[&rate=6.390353822594545E-4]:7.567921348753E1,((16[&rate=5.633341908903434E-4]:3.876191691889E1,((22[&rate=3.447167184332075E-4]:3.468309035193E0,21[&rate=3.07916205099355E-4]:3.468309035193E0)[&rate=7.638194289318662E-4]:4.390084770045E0,20[&rate=4.424107250105804E-4]:7.858393805238E0)[&rate=0.0016812837993772415]:3.090352311365E1)[&rate=9.80288710297613E-4]:3.528551690521E1,(((((3[&rate=4.424107250105804E-4]:2.171815157335E0,4[&rate=2.470891429183894E-4]:2.171815157335E0)[&rate=3.2067368401077776E-4]:4.723965727751E-1,2[&rate=2.0099040236757344E-4]:2.64421173011E0)[&rate=7.460135929861184E-4]:8.783333965784E0,5[&rate=3.447167184332075E-4]:1.142754569589E1)[&rate=5.066097019294435E-4]:2.771749475436E0,((7[&rate=3.6743046800013373E-4]:9.59617105114E0,6[&rate=6.125877263206706E-4]:9.59617105114E0)[&rate=2.470891429183894E-4]:1.27801552066E0,1[&rate=3.6743046800013373E-4]:1.08741865718E1)[&rate=6.390353822594545E-4]:3.32510859953E0)[&rate=6.125877263206706E-4]:5.906595491277E1,((30[&rate=8.446845102300667E-4]:4.880507558075E1,26[&rate=6.968735921907402E-4]:4.880507558075E1)[&rate=2.470891429183894E-4]:1.504868501029E1,32[&rate=4.957080547027265E-4]:6.385376059104E1)[&rate=6.968735921907402E-4]:9.411489493062E0)[&rate=6.670261269058315E-4]:7.821837400018E-1)[&rate=0.0012063415462943848]:1.631779663423E0)[&rate=5.516302283112064E-4]:1.482976541483E0,25[&rate=5.874260512070298E-4]:7.716219002901E1)[&rate=4.957080547027265E-4]:4.90155812249E-1,((((11[&rate=8.020875789748006E-4]:1.801527753452E1,29[&rate=7.460135929861184E-4]:1.801527753452E1)[&rate=8.446845102300667E-4]:5.128338566482E1,(33[&rate=0.001053787461148689]:5.221393998245E1,13[&rate=4.424107250105804E-4]:5.221393998245E1)[&rate=5.874260512070298E-4]:1.708472321689E1)[&rate=4.424107250105804E-4]:1.226723825238E0,(19[&rate=0.001053787461148689]:1.700916822088E1,18[&rate=6.125877263206706E-4]:1.700916822088E1)[&rate=4.424107250105804E-4]:5.35162188037E1)[&rate=2.2676083374627897E-4]:5.026086317692E0,((10[&rate=0.001053787461148689]:1.856373185197E1,31[&rate=5.401255454026521E-4]:1.856373185197E1)[&rate=3.2067368401077776E-4]:5.691282458383E1,23[&rate=2.6451651703730784E-4]:7.54765564358E1)[&rate=6.670261269058315E-4]:7.491690647019E-2)[&rate=5.287999956060568E-4]:2.100872498988E0)[&rate=3.447167184332075E-4]:1.890025224509E0,(17[&rate=7.638194289318662E-4]:7.079170717013E1,(27[&rate=3.2067368401077776E-4]:3.44566390445E1,28[&rate=8.227753045637104E-4]:3.44566390445E1)[&rate=8.929037701224505E-4]:3.633506812563E1)[&rate=5.633341908903434E-4]:8.750663895632E0)[&rate=0.0016812837993772415]:4.619078438895E1);\ntree STATE_3 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55130.41961333657,EEF_ucld_branchRates=-266.168517335019,lnP=-55130.41961333657,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.265597592001004E-4]:8.894066579974E0,9[&rate=4.942008716248169E-4]:8.894066579974E0)[&rate=4.942008716248169E-4]:7.413297552034E0,15[&rate=6.10615555232763E-4]:1.630736413201E1)[&rate=8.701281634825918E-4]:1.05429721927E2,(14[&rate=0.0014487090019437137]:5.06709934125E1,24[&rate=8.146421786052459E-4]:5.06709934125E1)[&rate=8.146421786052459E-4]:7.106609264646E1)[&rate=4.751169591625182E-4]:5.833296334621E0,((((((11[&rate=8.505166446613319E-4]:1.634423124338E1,29[&rate=5.705675442978731E-4]:1.634423124338E1)[&rate=8.146421786052459E-4]:5.602972737291E1,(33[&rate=8.146421786052459E-4]:5.777494628604E1,13[&rate=4.3578784528673376E-4]:5.777494628604E1)[&rate=3.0911402456563987E-4]:1.459901233025E1)[&rate=7.82343550272916E-4]:8.155563134595E-1,(19[&rate=5.903294744818761E-4]:1.638856103265E1,18[&rate=6.315659485059258E-4]:1.638856103265E1)[&rate=3.0911402456563987E-4]:5.680095389711E1)[&rate=9.380981198301507E-4]:2.853521681698E0,((10[&rate=8.505166446613319E-4]:1.703364988461E1,31[&rate=7.672816849567449E-4]:1.703364988461E1)[&rate=3.0911402456563987E-4]:5.806754549172E1,23[&rate=5.416248355097677E-4]:7.510119537633E1)[&rate=3.265597592001004E-4]:9.418412351273E-1)[&rate=3.93015342484971E-4]:2.437479239093E0,(25[&rate=6.423383786150817E-4]:7.682180135581E1,(12[&rate=6.315659485059258E-4]:7.577173523112E1,((((((3[&rate=5.705675442978731E-4]:2.936515268322E0,4[&rate=8.505166446613319E-4]:2.936515268322E0)[&rate=2.1750220322459818E-4]:2.172176350139E-1,2[&rate=0.0010274124997002878]:3.153732903336E0)[&rate=4.0421281044251186E-4]:8.987374165034E0,5[&rate=7.389536873156429E-4]:1.214110706837E1)[&rate=4.8468639813685797E-4]:2.457582565629E0,((7[&rate=6.423383786150817E-4]:9.212323691408E0,6[&rate=7.672816849567449E-4]:9.212323691408E0)[&rate=4.0421281044251186E-4]:7.637319843259E-1,1[&rate=4.942008716248169E-4]:9.976055675733E0)[&rate=6.003985464770884E-4]:4.622633958265E0)[&rate=6.423383786150817E-4]:5.726832544213E1,((30[&rate=9.943565750886703E-4]:5.150924347901E1,26[&rate=6.879378317525299E-4]:5.150924347901E1)[&rate=5.8039128041587E-4]:1.133732447301E1,32[&rate=3.93015342484971E-4]:6.284656795201E1)[&rate=4.3578784528673376E-4]:9.020447124121E0)[&rate=4.1502840590154513E-4]:2.823845134801E0,(16[&rate=5.22614015543845E-4]:4.151054091098E1,((22[&rate=0.001161169638341848]:3.754401843862E0,21[&rate=3.41991848716285E-4]:3.754401843862E0)[&rate=5.511999195063704E-4]:3.773258461487E0,20[&rate=4.255342167536232E-4]:7.527660305349E0)[&rate=0.0012267035700506072]:3.398288060563E1)[&rate=9.943565750886703E-4]:3.318031929996E1)[&rate=6.761103258563157E-4]:1.080875020185E0)[&rate=6.003985464770884E-4]:1.050066124693E0)[&rate=5.8039128041587E-4]:1.658714494734E0)[&rate=2.6174426815780483E-4]:2.166873964637E0,(17[&rate=7.126296315507377E-4]:7.250086945452E1,(27[&rate=6.315659485059258E-4]:2.824953325732E1,28[&rate=9.648256352788107E-4]:2.824953325732E1)[&rate=7.126296315507377E-4]:4.42513361972E1)[&rate=5.131462011710763E-4]:8.146520360661E0)[&rate=0.0017433905122138903]:4.69229925784E1);\ntree STATE_4 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55126.8531958235,EEF_ucld_branchRates=-266.168517335019,lnP=-55126.8531958235,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.958942865018653E-4]:7.980119830523E0,9[&rate=9.409357824418734E-4]:7.980119830523E0)[&rate=6.610092205557259E-4]:9.223074287036E0,15[&rate=5.640136042441317E-4]:1.720319411756E1)[&rate=7.215697147735745E-4]:1.03177976948E2,(14[&rate=0.001248797926431693]:5.101128745215E1,24[&rate=6.722214893654888E-4]:5.101128745215E1)[&rate=7.497794765887603E-4]:6.936988361345E1)[&rate=7.353173396272015E-4]:8.822578757667E0,((((((11[&rate=3.9537745351246215E-4]:1.765872030356E1,29[&rate=5.382771944612292E-4]:1.765872030356E1)[&rate=5.909167208060052E-4]:5.419026786031E1,(33[&rate=7.985752942302799E-4]:6.316680123389E1,13[&rate=4.1353642275682276E-4]:6.316680123389E1)[&rate=4.724598795905389E-4]:8.682186929977E0)[&rate=3.1712040905343885E-4]:1.253812802757E0,(19[&rate=5.298892934733114E-4]:1.589259478781E1,18[&rate=3.7604225355936045E-4]:1.589259478781E1)[&rate=5.640136042441317E-4]:5.721020617881E1)[&rate=4.0457609240361424E-4]:2.081218457384E0,((10[&rate=7.497794765887603E-4]:1.945417539857E1,31[&rate=8.591706622637619E-4]:1.945417539857E1)[&rate=3.3088217628321384E-4]:5.288462770702E1,23[&rate=6.097207020583551E-4]:7.233880310559E1)[&rate=3.1712040905343885E-4]:2.845216318423E0)[&rate=5.909167208060052E-4]:3.054949333202E0,(25[&rate=6.194411577770008E-4]:7.58509417795E1,(12[&rate=7.497794765887603E-4]:7.475059929462E1,((((((2[&rate=2.829135888180607E-4]:2.001651737464E0,4[&rate=6.097207020583551E-4]:2.001651737464E0)[&rate=5.817931495393205E-4]:9.191328349034E-1,3[&rate=6.722214893654888E-4]:2.920784572367E0)[&rate=8.372491380981624E-4]:1.021254595552E1,5[&rate=4.309059958531765E-4]:1.313333052788E1)[&rate=5.298892934733114E-4]:1.191963161146E0,((7[&rate=2.587163745161979E-4]:7.672308163403E0,6[&rate=4.5604259774885127E-4]:7.672308163403E0)[&rate=3.1712040905343885E-4]:8.614395739519E-1,1[&rate=2.829135888180607E-4]:8.533747737355E0)[&rate=7.650569687331224E-4]:5.791545951675E0)[&rate=5.215741123647838E-4]:5.790429613034E1,(16[&rate=3.7604225355936045E-4]:3.726786587316E1,((22[&rate=5.382771944612292E-4]:4.601106475017E0,21[&rate=8.833351477230477E-4]:4.601106475017E0)[&rate=5.553253287454143E-4]:4.338651081466E0,20[&rate=4.1353642275682276E-4]:8.939757556483E0)[&rate=0.001248797926431693]:2.832810831667E1)[&rate=6.958942865018653E-4]:3.496172394621E1)[&rate=9.409357824418734E-4]:4.426704831428E-1,((30[&rate=4.5604259774885127E-4]:5.307649583204E1,26[&rate=7.497794765887603E-4]:5.307649583204E1)[&rate=5.05108814335137E-4]:1.197683243844E1,32[&rate=4.642723446600494E-4]:6.505332827048E1)[&rate=5.728309913069172E-4]:7.618932032031E0)[&rate=7.084523981412808E-4]:2.078338992111E0)[&rate=3.1712040905343885E-4]:1.100342484881E0)[&rate=3.8588809152273316E-4]:2.388026977709E0)[&rate=5.382771944612292E-4]:3.035731214114E0,(17[&rate=6.00219506518633E-4]:7.432933597559E1,(27[&rate=3.9537745351246215E-4]:2.231170885024E1,28[&rate=0.001248797926431693]:2.231170885024E1)[&rate=4.887745314023434E-4]:5.201762712535E1)[&rate=4.724598795905389E-4]:6.94536399574E0)[&rate=0.0010188069351768198]:4.792904985194E1);\ntree STATE_5 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55145.76743416705,EEF_ucld_branchRates=-266.168517335019,lnP=-55145.76743416705,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.284586511296035E-4]:8.988874526607E0,9[&rate=0.0010471110139599945]:8.988874526607E0)[&rate=5.908358205426717E-4]:7.928595389068E0,15[&rate=3.460062796952484E-4]:1.691746991568E1)[&rate=8.125679624771528E-4]:9.921611174144E1,(14[&rate=9.421785681549233E-4]:5.130690722185E1,24[&rate=0.0012070475179313683]:5.130690722185E1)[&rate=7.410352212910093E-4]:6.482667443527E1)[&rate=9.000792418668197E-4]:1.200611009043E1,((((((33[&rate=7.153337011779748E-4]:5.842881509979E1,13[&rate=3.627281830402541E-4]:5.842881509979E1)[&rate=6.337412372369671E-4]:1.071371659715E1,(11[&rate=5.180614876118372E-4]:2.034846120923E1,29[&rate=6.560099401022837E-4]:2.034846120923E1)[&rate=6.228379023599891E-4]:4.879407048771E1)[&rate=8.625345666663701E-4]:2.665594421781E0,(19[&rate=0.0010471110139599945]:1.51406130555E1,18[&rate=7.029600340048602E-4]:1.51406130555E1)[&rate=3.460062796952484E-4]:5.666751306321E1)[&rate=5.284586511296035E-4]:5.095848167399E0,((10[&rate=6.674139007013036E-4]:2.856364207015E1,31[&rate=5.284586511296035E-4]:2.856364207015E1)[&rate=4.8643511888398524E-4]:4.521779247635E1,23[&rate=5.388228102025428E-4]:7.378143454651E1)[&rate=6.908658097291864E-4]:3.122539739603E0)[&rate=5.908358205426717E-4]:3.079034066281E0,((12[&rate=6.790250871653466E-4]:7.763060079507E1,((((((2[&rate=4.5352658208501766E-4]:1.910014604064E0,4[&rate=8.125679624771528E-4]:1.910014604064E0)[&rate=3.2712355195446647E-4]:6.65789620126E-1,3[&rate=8.808114590305644E-4]:2.57580422419E0)[&rate=3.047968895958437E-4]:1.095785793515E1,5[&rate=3.2712355195446647E-4]:1.353366215934E1)[&rate=0.0011583937692474851]:1.783660033855E0,((7[&rate=4.6469975843316035E-4]:6.501123400863E0,1[&rate=4.054427798861477E-4]:6.501123400863E0)[&rate=4.5352658208501766E-4]:1.690132196315E0,6[&rate=7.824908990682705E-4]:8.191255597178E0)[&rate=6.120642048620072E-4]:7.126066596018E0)[&rate=4.054427798861477E-4]:5.838444479636E1,((30[&rate=9.653902776980304E-4]:5.40607752468E1,26[&rate=8.285040884213225E-4]:5.40607752468E1)[&rate=3.2712355195446647E-4]:1.426443361425E1,32[&rate=4.4208479377401443E-4]:6.832520886104E1)[&rate=6.560099401022837E-4]:5.376558128517E0)[&rate=8.808114590305644E-4]:2.444804418705E0,(16[&rate=4.1813155165534464E-4]:3.97711590757E1,((22[&rate=6.560099401022837E-4]:3.541575892245E0,21[&rate=5.595338598108015E-4]:3.541575892245E0)[&rate=7.029600340048602E-4]:4.183779224866E0,20[&rate=6.120642048620072E-4]:7.72535511711E0)[&rate=0.0015864841418225762]:3.204580395859E1)[&rate=9.000792418668197E-4]:3.637541233256E1)[&rate=0.001079881489430989]:1.484029386803E0)[&rate=0.0012070475179313683]:1.401657878161E0,25[&rate=8.625345666663701E-4]:7.903225867323E1)[&rate=3.627281830402541E-4]:9.50749679163E-1)[&rate=8.285040884213225E-4]:5.02117290093E0,(17[&rate=7.029600340048602E-4]:7.96764124044E1,(27[&rate=8.125679624771528E-4]:2.269779704707E1,28[&rate=0.0015864841418225762]:2.269779704707E1)[&rate=4.1813155165534464E-4]:5.697861535733E1)[&rate=6.228379023599891E-4]:5.327768848926E0)[&rate=0.0015864841418225762]:4.313551049422E1);\ntree STATE_6 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55144.54150481558,EEF_ucld_branchRates=-266.168517335019,lnP=-55144.54150481558,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.108844231103969E-4]:7.955882687067E0,9[&rate=7.348718044447107E-4]:7.955882687067E0)[&rate=7.494268552672629E-4]:5.657522898089E0,15[&rate=7.803986358025438E-4]:1.361340558516E1)[&rate=7.969658964307591E-4]:1.003067745303E2,(14[&rate=0.001039896461485491]:4.792907794861E1,24[&rate=8.950853810921544E-4]:4.792907794861E1)[&rate=9.18970292372757E-4]:6.599110216682E1)[&rate=4.8101491702899206E-4]:8.2444271805E0,((((((33[&rate=8.327423379615736E-4]:5.557398785595E1,13[&rate=4.3155844893080406E-4]:5.557398785595E1)[&rate=5.904913645567397E-4]:9.642669307268E0,(11[&rate=2.4625055767745364E-4]:1.858762646732E1,29[&rate=4.3155844893080406E-4]:1.858762646732E1)[&rate=6.691886824036259E-4]:4.66290306959E1)[&rate=8.143761741214832E-4]:1.783851581137E0,(19[&rate=6.691886824036259E-4]:1.183730052356E1,18[&rate=7.803986358025438E-4]:1.183730052356E1)[&rate=2.934137251783608E-4]:5.51632082208E1)[&rate=2.934137251783608E-4]:7.649717365423E0,((10[&rate=5.697810568202703E-4]:2.803638106574E1,31[&rate=7.494268552672629E-4]:2.803638106574E1)[&rate=2.934137251783608E-4]:4.503702719086E1,23[&rate=6.454655406327056E-4]:7.30734082566E1)[&rate=5.904913645567397E-4]:1.576817853175E0)[&rate=3.6606049984949906E-4]:1.858445220136E0,(((12[&rate=8.143761741214832E-4]:6.964625469802E1,((30[&rate=7.969658964307591E-4]:4.907880463414E1,26[&rate=7.969658964307591E-4]:4.907880463414E1)[&rate=5.697810568202703E-4]:1.076849126568E1,32[&rate=4.002023144112605E-4]:5.984729589982E1)[&rate=5.004601287712626E-4]:9.798958798202E0)[&rate=4.8101491702899206E-4]:2.198775843852E0,(((((3[&rate=6.454655406327056E-4]:2.285714804425E0,4[&rate=5.495819752387034E-4]:2.285714804425E0)[&rate=4.416420555522912E-4]:3.375925370235E-1,2[&rate=3.108844231103969E-4]:2.623307341449E0)[&rate=0.0011268265720498088]:9.740736549966E0,5[&rate=3.6606049984949906E-4]:1.236404389141E1)[&rate=6.691886824036259E-4]:1.159316423671E0,((7[&rate=3.6606049984949906E-4]:7.820966364996E0,1[&rate=3.2638033838140073E-4]:7.820966364996E0)[&rate=6.340234452907275E-4]:1.263130797375E0,6[&rate=5.800637825216852E-4]:9.08409716237E0)[&rate=6.571782513638765E-4]:4.439263152715E0)[&rate=4.8101491702899206E-4]:5.826423059292E1,(16[&rate=5.297620622883042E-4]:3.779962479098E1,((22[&rate=0.0013481621073408816]:2.500003858253E0,21[&rate=6.118536497275481E-4]:2.500003858253E0)[&rate=2.934137251783608E-4]:4.849467472039E0,20[&rate=5.697810568202703E-4]:7.349471330292E0)[&rate=0.0011829928119369655]:3.045015346069E1)[&rate=0.0014934952487071801]:3.398796611703E1)[&rate=3.7787319673645604E-4]:5.743963386595E-2)[&rate=0.0010800447091355203]:2.76819223881E0,25[&rate=4.21317975242315E-4]:7.461322278069E1)[&rate=4.7126432698663015E-4]:1.895448549227E0)[&rate=5.396326928710295E-4]:3.70669900166E0,(17[&rate=6.010817097299917E-4]:7.110267934528E1,(27[&rate=5.101922380876828E-4]:2.324542241963E1,28[&rate=9.732736829684972E-4]:2.324542241963E1)[&rate=7.348718044447107E-4]:4.785725692565E1)[&rate=9.732736829684972E-4]:9.112690986297E0)[&rate=0.0018151640084546265]:4.194923696436E1);\ntree STATE_7 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55139.606098843455,EEF_ucld_branchRates=-266.168517335019,lnP=-55139.606098843455,RHOD_ucld_branchRates=-266.168517335019] = [&R] 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STATE_8 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55121.9401125964,EEF_ucld_branchRates=-266.168517335019,lnP=-55121.9401125964,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.390036884662745E-4]:8.569827855552E0,9[&rate=7.148944740861485E-4]:8.569827855552E0)[&rate=4.111919487725629E-4]:5.336238860854E0,15[&rate=8.415160265552725E-4]:1.390606671641E1)[&rate=6.885708657971076E-4]:1.076562283553E2,(14[&rate=0.0010935024897558156]:4.44758725026E1,24[&rate=7.938532807515849E-4]:4.44758725026E1)[&rate=9.98941207085299E-4]:7.70864225691E1)[&rate=6.467921533664746E-4]:7.891283140837E0,((((((33[&rate=8.288545851635866E-4]:5.638492094622E1,13[&rate=5.816301159805759E-4]:5.638492094622E1)[&rate=7.059804355164878E-4]:1.277382900037E1,(11[&rate=7.239706214440401E-4]:1.375568193973E1,29[&rate=8.050795589021622E-4]:1.375568193973E1)[&rate=8.415160265552725E-4]:5.540306800687E1)[&rate=8.050795589021622E-4]:2.078856011333E0,(19[&rate=3.907034858927431E-4]:1.629216678805E1,18[&rate=9.750878972317062E-4]:1.629216678805E1)[&rate=4.8022185338086E-4]:5.494543916988E1)[&rate=6.800440455403049E-4]:3.74144215303E0,((10[&rate=5.478082941919665E-4]:2.556548599373E1,31[&rate=5.980270197984777E-4]:2.556548599373E1)[&rate=4.282189767326637E-4]:4.678817562986E1,23[&rate=5.564463449789085E-4]:7.235366162359E1)[&rate=7.52366084311699E-4]:2.62538648737E0)[&rate=6.6327407058424E-4]:2.349951736231E0,((12[&rate=5.816301159805759E-4]:7.44228011961E1,((((((3[&rate=8.167293393070538E-4]:2.592413994882E0,4[&rate=4.111919487725629E-4]:2.592413994882E0)[&rate=7.938532807515849E-4]:2.100055829489E-1,2[&rate=5.64946524516647E-4]:2.802419577831E0)[&rate=0.0011387832826387782]:8.071258714626E0,5[&rate=4.910415268946466E-4]:1.087367829246E1)[&rate=7.059804355164878E-4]:8.787905250732E-1,((7[&rate=3.907034858927431E-4]:7.075170396849E0,1[&rate=6.142751389141861E-4]:7.075170396849E0)[&rate=8.288545851635866E-4]:4.974720350764E-1,6[&rate=0.0010568175604813673]:7.572642431925E0)[&rate=5.478082941919665E-4]:4.179826385605E0)[&rate=7.059804355164878E-4]:5.768785235264E1,((30[&rate=8.288545851635866E-4]:4.974078530311E1,26[&rate=6.972112682849033E-4]:4.974078530311E1)[&rate=6.142751389141861E-4]:1.004351171893E1,32[&rate=3.907034858927431E-4]:5.978429702204E1)[&rate=0.0010568175604813673]:9.65602414813E0)[&rate=4.111919487725629E-4]:3.335888055971E0,(16[&rate=5.816301159805759E-4]:3.231957233018E1,((22[&rate=6.550036882246595E-4]:2.864163877644E0,21[&rate=9.98941207085299E-4]:2.864163877644E0)[&rate=4.910415268946466E-4]:5.674572573211E0,20[&rate=6.467921533664746E-4]:8.538736450855E0)[&rate=0.001287743773141506]:2.378083587933E1)[&rate=7.938532807515849E-4]:4.045663689596E1)[&rate=6.885708657971076E-4]:1.646591969959E0)[&rate=4.5646187356434854E-4]:1.041112882466E0,25[&rate=6.304939004203264E-4]:7.546391407857E1)[&rate=4.282189767326637E-4]:1.865085768624E0)[&rate=8.991923453072178E-4]:6.919867862833E0,(17[&rate=7.72497460384424E-4]:7.647165777472E1,(27[&rate=5.112222246349429E-4]:2.470082187864E1,28[&rate=9.159588426583621E-4]:2.470082187864E1)[&rate=6.467921533664746E-4]:5.177083589608E1)[&rate=6.6327407058424E-4]:7.777209935308E0)[&rate=0.001287743773141506]:4.520471050251E1);\ntree STATE_9 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.36925630346,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.36925630346,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=9.900943521228376E-4]:8.566569890503E0,9[&rate=5.433135397518505E-4]:8.566569890503E0)[&rate=6.804273413900265E-4]:6.277086816739E0,15[&rate=8.059067146432804E-4]:1.484365670724E1)[&rate=6.609779198317763E-4]:1.065965781742E2,(14[&rate=0.001367613207454145]:4.447686965261E1,24[&rate=0.0010501998779511644]:4.447686965261E1)[&rate=7.797491117500977E-4]:7.696336522878E1)[&rate=9.011638420358655E-4]:7.722728001715E0,((((((11[&rate=6.804273413900265E-4]:1.60379217911E1,29[&rate=4.463243318232039E-4]:1.60379217911E1)[&rate=9.207092330446259E-4]:5.924781772252E1,(33[&rate=8.059067146432804E-4]:6.201301344728E1,13[&rate=5.160874072124125E-4]:6.201301344728E1)[&rate=6.804273413900265E-4]:1.327272606634E1)[&rate=3.961065471325046E-4]:1.332560350732E0,(19[&rate=5.522474308271677E-4]:1.521033395577E1,18[&rate=7.006069132855943E-4]:1.521033395577E1)[&rate=3.148656661888777E-4]:6.140796590858E1)[&rate=6.14630594543138E-4]:9.790055382911E-1,((10[&rate=6.32858818950554E-4]:2.54283375525E1,31[&rate=6.514808297429242E-4]:2.54283375525E1)[&rate=3.8071465665445E-4]:5.179574533359E1,23[&rate=4.97345945695808E-4]:7.722408288609E1)[&rate=3.422568930152044E-4]:3.73222516552E-1)[&rate=5.433135397518505E-4]:1.873574258086E0,((12[&rate=8.343827763201443E-4]:7.668684498019E1,((16[&rate=7.925707941135308E-4]:3.370850759852E1,((22[&rate=7.554393576225315E-4]:3.212377496058E0,21[&rate=3.422568930152044E-4]:3.212377496058E0)[&rate=7.797491117500977E-4]:5.168235457732E0,20[&rate=3.6318951828364396E-4]:8.38061295379E0)[&rate=0.0011310687312062126]:2.532789464473E1)[&rate=7.925707941135308E-4]:4.040566103098E1,(((((3[&rate=0.0011856466719875327]:1.974868242742E0,4[&rate=6.237029088792836E-4]:1.974868242742E0)[&rate=8.198195682898914E-4]:6.539422188376E-1,2[&rate=5.252551418746944E-4]:2.628810461579E0)[&rate=8.496832031819567E-4]:7.567091998284E0,5[&rate=4.349226341211698E-4]:1.019590245986E1)[&rate=3.422568930152044E-4]:2.141161238837E0,((7[&rate=6.904159617076632E-4]:7.887989837536E0,1[&rate=3.8071465665445E-4]:7.887989837536E0)[&rate=7.554393576225315E-4]:1.057910877061E0,6[&rate=6.609779198317763E-4]:8.945900714597E0)[&rate=6.32858818950554E-4]:3.391162984103E0)[&rate=5.522474308271677E-4]:5.901318766983E1,((30[&rate=4.97345945695808E-4]:5.275632021792E1,26[&rate=5.877712449039174E-4]:5.275632021792E1)[&rate=6.804273413900265E-4]:8.545341977115E0,32[&rate=4.463243318232039E-4]:6.130166219503E1)[&rate=6.32858818950554E-4]:1.00485891735E1)[&rate=5.160874072124125E-4]:2.763917260968E0)[&rate=0.001018280354246158]:2.572676350692E0)[&rate=3.8071465665445E-4]:1.740312684115E0,25[&rate=0.001018280354246158]:7.84271576643E1)[&rate=5.788893631092454E-4]:1.043721996425E0)[&rate=5.877712449039174E-4]:5.066679650943E0,(17[&rate=7.925707941135308E-4]:7.479240481834E1,(27[&rate=5.067941110771175E-4]:2.621071082587E1,28[&rate=0.0010871177130776118]:2.621071082587E1)[&rate=8.198195682898914E-4]:4.858169399248E1)[&rate=5.700185452462508E-4]:9.745154493328E0)[&rate=0.0012581614934330278]:4.462540357144E1);\ntree STATE_10 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.727454768545,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.727454768545,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.565387345008174E-4]:8.095261951754E0,9[&rate=0.0020761272207486634]:8.095261951754E0)[&rate=8.974064807418605E-4]:5.38957803014E0,15[&rate=4.087451471246129E-4]:1.348483998189E1)[&rate=6.80232642651083E-4]:1.0179428265E2,(14[&rate=0.0012394120327276351]:4.502012081775E1,24[&rate=9.794239443454064E-4]:4.502012081775E1)[&rate=0.0011176268948102466]:7.025900181416E1)[&rate=3.3951471514524165E-4]:7.313059721239E0,((((((33[&rate=6.106957905389321E-4]:5.681548913868E1,13[&rate=5.097035470267665E-4]:5.681548913868E1)[&rate=9.163351332549776E-4]:1.098355631626E1,(11[&rate=5.436660972299875E-4]:1.823147338128E1,29[&rate=5.548423344535778E-4]:1.823147338128E1)[&rate=7.172391449965775E-4]:4.956757207366E1)[&rate=3.936459112310721E-4]:9.609414166686E-1,(19[&rate=5.548423344535778E-4]:1.425110571161E1,18[&rate=8.79329944234177E-4]:1.425110571161E1)[&rate=4.981392193141693E-4]:5.450888116E1)[&rate=5.324356355089859E-4]:2.888490683775E0,((10[&rate=3.158047300469646E-4]:2.260064059613E1,31[&rate=7.431402510746801E-4]:2.260064059613E1)[&rate=3.3951471514524165E-4]:4.797669208578E1,23[&rate=7.300498368021334E-4]:7.057733268191E1)[&rate=7.172391449965775E-4]:1.071144873473E0)[&rate=6.682961277697795E-4]:1.455913871998E0,((12[&rate=8.79329944234177E-4]:6.875987826605E1,((16[&rate=3.158047300469646E-4]:2.87051588145E1,((22[&rate=0.001193627575632314]:2.453125231709E0,21[&rate=8.79329944234177E-4]:2.453125231709E0)[&rate=9.163351332549776E-4]:3.965975967039E0,20[&rate=8.293530212295146E-4]:6.419101198748E0)[&rate=0.0013567638882743948]:2.228605761576E1)[&rate=9.163351332549776E-4]:3.933680399551E1,(((30[&rate=5.211245841099812E-4]:5.041209427267E1,26[&rate=5.211245841099812E-4]:5.041209427267E1)[&rate=8.620132716269078E-4]:5.97089199802E0,32[&rate=3.158047300469646E-4]:5.638298627069E1)[&rate=4.229794115111491E-4]:7.774723505272E0,((((2[&rate=6.80232642651083E-4]:1.161920369672E0,4[&rate=0.0010556552688857452]:1.161920369672E0)[&rate=5.211245841099812E-4]:1.180375639585E0,3[&rate=9.794239443454064E-4]:2.342296009258E0)[&rate=8.974064807418605E-4]:7.316756904331E0,5[&rate=3.158047300469646E-4]:9.659052913589E0)[&rate=5.659883612847565E-4]:1.456063425613E0,((7[&rate=8.453771952631063E-4]:5.835932601117E0,6[&rate=6.448968926035843E-4]:5.835932601117E0)[&rate=0.001193627575632314]:1.847735793811E0,1[&rate=4.087451471246129E-4]:7.683668394928E0)[&rate=6.565240926033435E-4]:3.431447944273E0)[&rate=6.682961277697795E-4]:5.304259343676E1)[&rate=5.882772070818888E-4]:3.884253034054E0)[&rate=0.0015449087128659208]:7.179154560298E-1)[&rate=7.172391449965775E-4]:1.214675986695E0,25[&rate=7.565387345008174E-4]:6.997455425274E1)[&rate=6.106957905389321E-4]:3.129837174638E0)[&rate=4.863932278589192E-4]:5.170562193253E0,(17[&rate=0.0010283902386889695]:6.714130517087E1,(27[&rate=3.158047300469646E-4]:2.080957971762E1,28[&rate=0.0015449087128659208]:2.080957971762E1)[&rate=7.172391449965775E-4]:4.633172545325E1)[&rate=4.4956812243790716E-4]:1.113364844977E1)[&rate=0.001193627575632314]:4.431722873252E1);\ntree STATE_11 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55154.515035210075,EEF_ucld_branchRates=-266.168517335019,lnP=-55154.515035210075,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.6589707023059246E-4]:9.0872619867E0,9[&rate=5.364223393560873E-4]:9.0872619867E0)[&rate=6.581161829010711E-4]:4.870364343127E0,15[&rate=6.001912022882079E-4]:1.395762632983E1)[&rate=5.572074754252509E-4]:9.739215079023E1,(14[&rate=0.0010403629654011238]:4.664559059434E1,24[&rate=6.342408212006567E-4]:4.664559059434E1)[&rate=0.0014104897940793338]:6.470418652572E1)[&rate=5.892246828062797E-4]:1.843280254803E1,((((((19[&rate=4.955808312364502E-4]:1.455327889749E1,18[&rate=8.773955810916141E-4]:1.455327889749E1)[&rate=3.6589707023059246E-4]:5.673110566261E1,(11[&rate=5.05743561467904E-4]:1.875814735984E1,29[&rate=4.854191268531925E-4]:1.875814735984E1)[&rate=0.0010403629654011238]:5.252623720025E1)[&rate=2.698819676785777E-4]:4.029933831882E-1,(33[&rate=8.994773048365594E-4]:6.072623452952E1,13[&rate=2.698819676785777E-4]:6.072623452952E1)[&rate=4.2320774406403927E-4]:1.096114341376E1)[&rate=7.681204296520909E-4]:3.612995832506E0,((10[&rate=5.784172626460162E-4]:2.047728117534E1,31[&rate=4.854191268531925E-4]:2.047728117534E1)[&rate=4.752384124334228E-4]:5.334236257538E1,23[&rate=5.892246828062797E-4]:7.381964375072E1)[&rate=2.698819676785777E-4]:1.480730025066E0)[&rate=8.186059777909805E-4]:1.417635964988E0,((12[&rate=7.378299173180694E-4]:7.401520776112E1,(((((2[&rate=4.338587624786942E-4]:1.864262413142E0,4[&rate=8.186059777909805E-4]:1.864262413142E0)[&rate=4.5473147019727786E-4]:5.674842425133E-1,3[&rate=6.113358384298133E-4]:2.431746655655E0)[&rate=7.378299173180694E-4]:9.106502639456E0,5[&rate=4.5473147019727786E-4]:1.153824929511E1)[&rate=8.186059777909805E-4]:1.060087699058E0,((7[&rate=3.089733306653309E-4]:7.544064889519E0,6[&rate=6.226786278298425E-4]:7.544064889519E0)[&rate=3.249268411399915E-4]:1.167498116914E0,1[&rate=2.698819676785777E-4]:8.711563006433E0)[&rate=7.681204296520909E-4]:3.886773987735E0)[&rate=3.6589707023059246E-4]:6.033013274983E1,(((30[&rate=8.371220950499353E-4]:5.578085235416E1,26[&rate=7.842001683872851E-4]:5.578085235416E1)[&rate=0.0011715429838948775]:6.670980003961E0,32[&rate=3.089733306653309E-4]:6.245183235812E1)[&rate=2.427479518955201E-4]:8.967948199312E0,(16[&rate=6.342408212006567E-4]:3.045805756457E1,((22[&rate=0.0011212389528720515]:2.147339326037E0,21[&rate=6.581161829010711E-4]:2.147339326037E0)[&rate=6.7048044543632E-4]:3.776378938581E0,20[&rate=4.012743933811985E-4]:5.923718264618E0)[&rate=0.0019189601608913052]:2.453433929995E1)[&rate=9.231344571198702E-4]:4.096172299286E1)[&rate=6.7048044543632E-4]:1.508689186568E0)[&rate=5.05743561467904E-4]:1.086738017119E0)[&rate=6.342408212006567E-4]:1.530584162235E0,25[&rate=7.842001683872851E-4]:7.554579192336E1)[&rate=0.0014104897940793338]:1.17221781742E0)[&rate=4.6501707945489755E-4]:2.477948035318E0,(17[&rate=0.0011715429838948775]:6.889849475946E1,(27[&rate=4.5473147019727786E-4]:2.847091508902E1,28[&rate=8.009995637084802E-4]:2.847091508902E1)[&rate=8.566698346578898E-4]:4.042757967044E1)[&rate=6.113358384298133E-4]:1.029746301663E1)[&rate=0.0014104897940793338]:5.0586621892E1);\ntree STATE_12 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55157.155388174986,EEF_ucld_branchRates=-266.168517335019,lnP=-55157.155388174986,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.549407163711136E-4]:9.237212614191E0,9[&rate=8.700229035677426E-4]:9.237212614191E0)[&rate=4.013281110871622E-4]:5.683589600134E0,15[&rate=4.4122624600277785E-4]:1.492080221433E1)[&rate=7.722657880420839E-4]:9.224454835667E1,(14[&rate=0.0011627372997929477]:4.434782796756E1,24[&rate=0.0011169430181629581]:4.434782796756E1)[&rate=0.0011627372997929477]:6.281752260343E1)[&rate=7.846505453339222E-4]:2.199724150413E1,((((((33[&rate=7.846505453339222E-4]:6.191185706921E1,13[&rate=3.6753569056112797E-4]:6.191185706921E1)[&rate=6.453719498370311E-4]:6.37308549237E0,(11[&rate=4.4122624600277785E-4]:2.169544447631E1,29[&rate=5.342612431328813E-4]:2.169544447631E1)[&rate=6.844293238555242E-4]:4.658949808526E1)[&rate=4.8539992719435175E-4]:1.448898210479E0,(19[&rate=5.248084394996597E-4]:1.075797236654E1,18[&rate=8.390289159714373E-4]:1.075797236654E1)[&rate=4.955623692927919E-4]:5.897586840552E1)[&rate=9.234872247763082E-4]:4.149530542963E0,((10[&rate=5.436132470412716E-4]:1.822802463047E1,31[&rate=6.172263883867203E-4]:1.822802463047E1)[&rate=3.6753569056112797E-4]:5.523186189473E1,23[&rate=5.987802242470426E-4]:7.34598865252E1)[&rate=6.35906765427893E-4]:4.234847898205E-1)[&rate=4.955623692927919E-4]:2.018003166238E0,(25[&rate=5.621059657824798E-4]:7.48169873301E1,((12[&rate=7.722657880420839E-4]:6.995284747091E1,(16[&rate=7.974664190715935E-4]:2.978169456473E1,((22[&rate=8.245947539194194E-4]:2.394321083169E0,21[&rate=9.04549375512589E-4]:2.394321083169E0)[&rate=6.453719498370311E-4]:6.015602641113E0,20[&rate=4.955623692927919E-4]:8.409923724282E0)[&rate=0.0014096038047440738]:2.137177084045E1)[&rate=0.0011169430181629581]:4.017115290618E1)[&rate=0.0014096038047440738]:1.661612763508E0,(((30[&rate=8.54141431297666E-4]:5.00595672351E1,26[&rate=5.712869688767864E-4]:5.00595672351E1)[&rate=8.54141431297666E-4]:9.268747231891E0,32[&rate=3.4606819816348567E-4]:5.932831446699E1)[&rate=4.013281110871622E-4]:9.92141148946E0,((((2[&rate=7.262499467059052E-4]:1.584583650241E0,4[&rate=7.154656690545067E-4]:1.584583650241E0)[&rate=3.180046976055937E-4]:5.686045510407E-1,3[&rate=6.744526087378945E-4]:2.153188201282E0)[&rate=7.154656690545067E-4]:7.543109868545E0,5[&rate=5.712869688767864E-4]:9.696298069827E0)[&rate=5.436132470412716E-4]:2.725922345153E0,((7[&rate=3.6753569056112797E-4]:7.474689952912E0,6[&rate=6.744526087378945E-4]:7.474689952912E0)[&rate=4.4122624600277785E-4]:9.362681276306E-1,1[&rate=6.744526087378945E-4]:8.410958080542E0)[&rate=5.712869688767864E-4]:4.011262334438E0)[&rate=6.844293238555242E-4]:5.682750554147E1)[&rate=9.04549375512589E-4]:2.364734277973E0)[&rate=8.390289159714373E-4]:3.20252709568E0)[&rate=8.390289159714373E-4]:1.084387151157E0)[&rate=3.180046976055937E-4]:4.668894258915E0,(17[&rate=6.945771841873951E-4]:7.106228232809E1,(27[&rate=6.744526087378945E-4]:2.221994934111E1,28[&rate=0.0010159428087795843]:2.221994934111E1)[&rate=5.436132470412716E-4]:4.884233298698E1)[&rate=9.896353561781568E-4]:9.507986412085E0)[&rate=0.0014096038047440738]:4.859232333495E1);\ntree STATE_13 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55132.68507874516,EEF_ucld_branchRates=-266.168517335019,lnP=-55132.68507874516,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.758058457353949E-4]:8.955668561954E0,9[&rate=6.631741946122945E-4]:8.955668561954E0)[&rate=4.573350758489119E-4]:5.898816585764E0,15[&rate=4.759871500750643E-4]:1.485448514772E1)[&rate=7.945340957059258E-4]:9.380501078005E1,(14[&rate=8.38589652933589E-4]:4.449291706563E1,24[&rate=9.354449400578019E-4]:4.449291706563E1)[&rate=9.608383499970157E-4]:6.416657886214E1)[&rate=0.0011757341926410616]:1.781724789846E1,(((25[&rate=6.820473462344158E-4]:7.31747700533E1,(((((((4[&rate=4.154266937654352E-4]:2.610328575045E0,2[&rate=4.759871500750643E-4]:2.610328575045E0)[&rate=0.0012731390146388081]:1.249421705328E0,3[&rate=6.103179253799095E-4]:3.859750280374E0)[&rate=8.727909142795875E-4]:8.991156234857E0,5[&rate=4.033704793154663E-4]:1.285090651523E1)[&rate=5.852348831588415E-4]:2.180385512041E0,((7[&rate=5.687594763393808E-4]:1.016825601032E1,6[&rate=4.759871500750643E-4]:1.016825601032E1)[&rate=7.945340957059258E-4]:1.934958949876E-1,1[&rate=5.935333782346822E-4]:1.036175190531E1)[&rate=4.2670378756619494E-4]:4.669540121965E0)[&rate=6.631741946122945E-4]:5.124103130833E1,((30[&rate=6.361667945953099E-4]:4.670481788035E1,26[&rate=8.084302908223347E-4]:4.670481788035E1)[&rate=5.769813236975734E-4]:8.034916971036E0,32[&rate=5.276382043475137E-4]:5.473973485139E1)[&rate=5.10891630405812E-4]:1.153258848421E1)[&rate=6.361667945953099E-4]:3.043867289032E0,(16[&rate=5.687594763393808E-4]:3.156305189163E1,((22[&rate=7.564992369646577E-4]:2.590103984927E0,21[&rate=7.226450443757622E-4]:2.590103984927E0)[&rate=9.608383499970157E-4]:3.187402419238E0,20[&rate=5.60555904900648E-4]:5.777506404165E0)[&rate=0.0011757341926410616]:2.578554548746E1)[&rate=7.335468998198809E-4]:3.7753138733E1)[&rate=5.35913626117201E-4]:3.769286160875E0,12[&rate=8.918716859079243E-4]:7.30854767855E1)[&rate=5.935333782346822E-4]:8.929326780076E-2)[&rate=4.759871500750643E-4]:9.850089175227E-1,((((11[&rate=3.3949671743888353E-4]:1.742154995075E1,29[&rate=6.018899743462611E-4]:1.742154995075E1)[&rate=9.354449400578019E-4]:5.117986570973E1,(33[&rate=7.686402084697027E-4]:5.297330864847E1,13[&rate=4.937443630127629E-4]:5.297330864847E1)[&rate=5.02379823772891E-4]:1.5628107012E1)[&rate=5.523567927143239E-4]:1.417688418508E0,(19[&rate=6.91803846308752E-4]:1.504360031851E1,18[&rate=7.945340957059258E-4]:1.504360031851E1)[&rate=4.759871500750643E-4]:5.497550376047E1)[&rate=5.10891630405812E-4]:2.601091598373E0,((10[&rate=6.820473462344158E-4]:2.499121319924E1,31[&rate=8.084302908223347E-4]:2.499121319924E1)[&rate=3.135226353074555E-4]:4.717627786596E1,23[&rate=5.523567927143239E-4]:7.21674910652E1)[&rate=7.120750945492981E-4]:4.527046121553E-1)[&rate=4.3737102392230347E-4]:1.539583293474E0)[&rate=7.226450443757622E-4]:2.307096506365E0,(17[&rate=9.126299575190982E-4]:5.866051275335E1,(27[&rate=4.3737102392230347E-4]:3.477236670925E1,28[&rate=8.727909142795875E-4]:3.477236670925E1)[&rate=0.0010621386109660028]:2.38881460441E1)[&rate=5.441477553518497E-4]:1.780636272384E1)[&rate=0.0010621386109660028]:5.000986834904E1);\ntree STATE_14 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.5324309916,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.5324309916,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.0238974300974706E-4]:7.253261647156E0,9[&rate=7.589619695539044E-4]:7.253261647156E0)[&rate=4.12125220914992E-4]:9.12847796961E0,15[&rate=6.49488662929709E-4]:1.638173961677E1)[&rate=5.937913081567761E-4]:9.409701631642E1,(14[&rate=0.0011912096431048278]:3.975017094763E1,24[&rate=8.113152095820876E-4]:3.975017094763E1)[&rate=0.0010714071853514511]:7.072858498555E1)[&rate=0.0011912096431048278]:1.896636375338E1,(((25[&rate=5.532001622028132E-4]:7.702040980136E1,(((((30[&rate=6.867922426092057E-4]:5.322669526753E1,26[&rate=6.867922426092057E-4]:5.322669526753E1)[&rate=6.152746115961397E-4]:9.830725724288E0,32[&rate=5.054360693218599E-4]:6.305742099182E1)[&rate=3.6107510832553337E-4]:9.16676698079E0,((((4[&rate=5.833764828162061E-4]:2.545133773583E0,3[&rate=7.928743206654859E-4]:2.545133773583E0)[&rate=6.263883367892908E-4]:6.734250398319E-1,2[&rate=4.498633554042796E-4]:3.218558813415E0)[&rate=5.242584596740147E-4]:1.057147494149E1,5[&rate=2.610554530980564E-4]:1.379003375491E1)[&rate=9.557666380719462E-4]:1.481840703734E0,((7[&rate=4.591284695900369E-4]:8.082341653522E0,6[&rate=0.0010271238247065225]:8.082341653522E0)[&rate=3.498379695018622E-4]:1.062214003147E0,1[&rate=5.054360693218599E-4]:9.144555656668E0)[&rate=3.9246683832268596E-4]:6.127318801974E0)[&rate=5.242584596740147E-4]:5.695231351397E1)[&rate=3.2553373988403726E-4]:2.272653668302E0,(16[&rate=3.8231195227624335E-4]:3.955834005638E1,((22[&rate=8.745828059780699E-4]:2.3311208713E0,21[&rate=4.12125220914992E-4]:2.3311208713E0)[&rate=7.000866172578479E-4]:5.642908590651E0,20[&rate=5.054360693218599E-4]:7.974029461951E0)[&rate=7.432556040938871E-4]:3.158431059443E1)[&rate=8.309442916705051E-4]:3.493850158453E1)[&rate=9.260219058890646E-4]:1.6252466032E0,12[&rate=8.991390376618166E-4]:7.612208824411E1)[&rate=3.6107510832553337E-4]:8.983215572436E-1)[&rate=8.745828059780699E-4]:1.355851143839E0,((((11[&rate=5.532001622028132E-4]:1.843918890631E1,29[&rate=4.8684804404665983E-4]:1.843918890631E1)[&rate=5.630992831785108E-4]:4.987818528387E1,(33[&rate=9.557666380719462E-4]:6.191248818911E1,13[&rate=2.8069237175515924E-4]:6.191248818911E1)[&rate=0.0012808139267449761]:6.404886001057E0)[&rate=4.591284695900369E-4]:5.230652870352E0,(19[&rate=7.589619695539044E-4]:1.675519880094E1,18[&rate=4.0238974300974706E-4]:1.675519880094E1)[&rate=5.337957946257013E-4]:5.679282825959E1)[&rate=4.6836888147953556E-4]:1.241624356231E0,((10[&rate=4.12125220914992E-4]:2.360672107627E1,31[&rate=7.754659491959088E-4]:2.360672107627E1)[&rate=2.9732753100044225E-4]:5.044888055845E1,23[&rate=6.044167786381218E-4]:7.405560163472E1)[&rate=4.311774879701899E-4]:7.34049782038E-1)[&rate=3.2553373988403726E-4]:3.586609528442E0)[&rate=5.054360693218599E-4]:4.405361639629E0,(17[&rate=6.739561946859455E-4]:7.009305980529E1,(27[&rate=4.405536422032317E-4]:3.366976166682E1,28[&rate=0.0012808139267449761]:3.366976166682E1)[&rate=7.000866172578479E-4]:3.642329813847E1)[&rate=7.589619695539044E-4]:1.268856277953E1)[&rate=0.0012808139267449761]:4.666349710174E1);\ntree STATE_15 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.32527386783,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.32527386783,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.118482569334975E-4]:6.321518292542E0,9[&rate=6.29726678209237E-4]:6.321518292542E0)[&rate=3.2680027085809873E-4]:8.71427131593E0,15[&rate=9.903668907412751E-4]:1.503578960847E1)[&rate=7.380959259644978E-4]:1.023627936744E2,(14[&rate=0.0014570815389533026]:4.511125849093E1,24[&rate=7.699321944751683E-4]:4.511125849093E1)[&rate=9.337868601339419E-4]:7.22873247919E1)[&rate=9.608868924009312E-4]:1.207580602174E1,(((25[&rate=6.176828843754559E-4]:7.138407651894E1,((((16[&rate=4.965370587508066E-4]:3.724325599135E1,((22[&rate=9.903668907412751E-4]:2.028826555418E0,21[&rate=4.441054909961613E-4]:2.028826555418E0)[&rate=7.230545092062196E-4]:5.008828354334E0,20[&rate=4.118482569334975E-4]:7.037654909752E0)[&rate=0.0013462024311208906]:3.02056010816E1)[&rate=8.633497447201288E-4]:2.896663049248E1,((((4[&rate=4.227342060687943E-4]:2.02696631264E0,2[&rate=3.6592529911581823E-4]:2.02696631264E0)[&rate=0.0010586265181049335]:2.904307151312E-1,3[&rate=4.546548402879399E-4]:2.317397027771E0)[&rate=5.070353433508079E-4]:9.570435488018E0,5[&rate=5.496998513929008E-4]:1.188783251579E1)[&rate=6.420339534374775E-4]:2.308240387501E0,((7[&rate=4.118482569334975E-4]:8.614176361928E0,6[&rate=8.045596740635029E-4]:8.614176361928E0)[&rate=5.070353433508079E-4]:4.767300970468E-1,1[&rate=3.5351534733626055E-4]:9.090906458975E0)[&rate=5.606220112799831E-4]:5.105166444316E0)[&rate=6.058784057544988E-4]:5.201381358054E1)[&rate=8.426842919861049E-4]:1.667961315908E0,((30[&rate=7.380959259644978E-4]:5.04377657877E1,26[&rate=5.388976984687352E-4]:5.04377657877E1)[&rate=4.546548402879399E-4]:9.016642100139E0,32[&rate=2.9602474210386353E-4]:5.945440788784E1)[&rate=6.944559650387033E-4]:8.423439911897E0)[&rate=0.0012642210870195954]:1.61318483846E0,12[&rate=0.001022724370661214]:6.94910326382E1)[&rate=0.0011991513786994866]:1.89304388074E0)[&rate=5.716821251482823E-4]:2.894091811389E0,((((33[&rate=0.0010586265181049335]:5.343781925382E1,13[&rate=5.716821251482823E-4]:5.343781925382E1)[&rate=2.568426757476306E-4]:1.415182400653E1,(11[&rate=8.426842919861049E-4]:1.81599302277E1,29[&rate=5.388976984687352E-4]:1.81599302277E1)[&rate=8.231315012729861E-4]:4.942971303264E1)[&rate=3.1208797145621144E-4]:1.854704279298E0,(19[&rate=3.778808891391027E-4]:1.496362657021E1,18[&rate=9.608868924009312E-4]:1.496362657021E1)[&rate=3.8947427028808847E-4]:5.448072096944E1)[&rate=0.0012642210870195954]:3.532769849838E0,((10[&rate=7.699321944751683E-4]:2.518060891621E1,31[&rate=5.388976984687352E-4]:2.518060891621E1)[&rate=3.405293272278505E-4]:4.713208943576E1,23[&rate=4.756140648089928E-4]:7.231269835197E1)[&rate=4.118482569334975E-4]:6.644190375151E-1)[&rate=4.8606971358347535E-4]:1.301050940842E0)[&rate=5.281979188612834E-4]:3.973045615446E0,(17[&rate=8.852861109288588E-4]:6.784665261012E1,(27[&rate=6.546307900569246E-4]:2.612596129496E1,28[&rate=0.0012642210870195954]:2.612596129496E1)[&rate=6.29726678209237E-4]:4.172069131517E1)[&rate=4.227342060687943E-4]:1.040456133565E1)[&rate=0.0014570815389533026]:5.12231753588E1);\ntree STATE_16 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55160.14298629151,EEF_ucld_branchRates=-266.168517335019,lnP=-55160.14298629151,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.36356383532107E-4]:7.59589354893E0,9[&rate=0.0011620402326078]:7.59589354893E0)[&rate=5.296066976212456E-4]:4.535024859767E0,15[&rate=5.942088904771761E-4]:1.21309184087E1)[&rate=7.36356383532107E-4]:1.112737502884E2,(14[&rate=9.938468527416538E-4]:4.625884361997E1,24[&rate=7.36356383532107E-4]:4.625884361997E1)[&rate=7.8514332711469E-4]:7.714582507715E1)[&rate=0.0011620402326078]:3.021929372181E0,(((25[&rate=6.055807748800204E-4]:7.600886195508E1,(((((((4[&rate=8.414718514233315E-4]:1.462174261868E0,2[&rate=4.988272486160912E-4]:1.462174261868E0)[&rate=4.379340646527872E-4]:6.486620532412E-1,3[&rate=4.0666323213377697E-4]:2.110836315109E0)[&rate=9.629465122293221E-4]:1.028669070209E1,5[&rate=3.239993441142344E-4]:1.23975270172E1)[&rate=9.347786471579876E-4]:2.223339018187E0,((7[&rate=4.684405913450021E-4]:7.114679108352E0,6[&rate=3.5000216052246763E-4]:7.114679108352E0)[&rate=4.886784285208488E-4]:1.289340975605E0,1[&rate=4.276334136752185E-4]:8.404020083957E0)[&rate=5.505742274465613E-4]:6.21684595143E0)[&rate=5.400343681870574E-4]:5.39350673863E1,((30[&rate=6.17179272099044E-4]:4.92164117078E1,26[&rate=7.213749476077792E-4]:4.92164117078E1)[&rate=5.942088904771761E-4]:1.165773257327E1,32[&rate=4.4815202371425273E-4]:6.087414428107E1)[&rate=2.93997772410455E-4]:7.681789140616E0)[&rate=3.736879211522297E-4]:1.114862637018E0,(16[&rate=3.8494833127585167E-4]:3.750682027101E1,((22[&rate=0.0013018931538154232]:3.12132718283E0,21[&rate=8.216795846220895E-4]:3.12132718283E0)[&rate=5.192742321792005E-4]:6.250751523375E0,20[&rate=4.1722094471814295E-4]:9.372078706205E0)[&rate=0.0011620402326078]:2.813474156481E1)[&rate=0.001223959887129298]:3.216397578769E1)[&rate=9.938468527416538E-4]:2.885021150128E0,12[&rate=5.400343681870574E-4]:7.255581720883E1)[&rate=3.8494833127585167E-4]:3.453044746254E0)[&rate=5.400343681870574E-4]:1.3673376839E0,((((11[&rate=5.612435381832351E-4]:1.620914494695E1,29[&rate=6.17179272099044E-4]:1.620914494695E1)[&rate=8.414718514233315E-4]:5.38250238073E1,(19[&rate=4.4815202371425273E-4]:1.721542613831E1,18[&rate=9.938468527416538E-4]:1.721542613831E1)[&rate=3.620693463415381E-4]:5.281874261594E1)[&rate=9.347786471579876E-4]:1.540847845411E0,(33[&rate=7.519321805323345E-4]:6.055285532981E1,13[&rate=6.7945039583527E-4]:6.055285532981E1)[&rate=9.088714358781018E-4]:1.102216126985E1)[&rate=3.5000216052246763E-4]:2.941065167121E0,((10[&rate=3.959212118797708E-4]:1.812565672046E1,31[&rate=7.069298325344E-4]:1.812565672046E1)[&rate=2.5572077704553574E-4]:5.436626475235E1,23[&rate=5.192742321792005E-4]:7.249192147281E1)[&rate=8.029451197239374E-4]:2.024160293975E0)[&rate=4.0666323213377697E-4]:2.860117872201E0)[&rate=5.090200806007932E-4]:5.155254799853E0,(17[&rate=9.347786471579876E-4]:6.846608139923E1,(27[&rate=5.612435381832351E-4]:2.284721914937E1,28[&rate=0.0013018931538154232]:2.284721914937E1)[&rate=6.411503311032941E-4]:4.561886224986E1)[&rate=3.096635299177424E-4]:1.406537303961E1)[&rate=0.0014071655987174226]:4.389514363046E1);\ntree STATE_17 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55143.38273308143,EEF_ucld_branchRates=-266.168517335019,lnP=-55143.38273308143,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.506555873556851E-4]:7.782559943303E0,9[&rate=4.4134343887960987E-4]:7.782559943303E0)[&rate=4.795290057618743E-4]:3.886493701882E0,15[&rate=5.295237023593705E-4]:1.166905364519E1)[&rate=9.874478348461955E-4]:9.434401092198E1,(14[&rate=0.0011380672227444576]:4.140097174971E1,24[&rate=8.371498644216759E-4]:4.140097174971E1)[&rate=8.617805661195788E-4]:6.461209281745E1)[&rate=0.0012129038251036403]:2.027672574672E1,(((25[&rate=6.595978307798603E-4]:7.578405838826E1,(((16[&rate=3.749228995664782E-4]:3.919324198424E1,((22[&rate=3.127711449059808E-4]:2.523869494099E0,21[&rate=7.366813638643875E-4]:2.523869494099E0)[&rate=0.0012129038251036403]:6.596889354711E0,20[&rate=7.198366130957052E-4]:9.120758848811E0)[&rate=0.001314217762520253]:3.007248313543E1)[&rate=0.0010295070770397566]:3.371750487466E1,(((30[&rate=8.371498644216759E-4]:5.091051873416E1,26[&rate=4.6030977385842076E-4]:5.091051873416E1)[&rate=5.399903353083351E-4]:8.338346113434E0,32[&rate=5.726652849829668E-4]:5.924886484759E1)[&rate=4.0363270993555665E-4]:1.071153093659E1,((((4[&rate=8.371498644216759E-4]:2.009648719856E0,2[&rate=4.319144420999477E-4]:2.009648719856E0)[&rate=6.884435116591824E-4]:1.02356672841E0,3[&rate=4.698798128342713E-4]:3.033215448265E0)[&rate=3.4503991728950775E-4]:9.273018170191E0,5[&rate=3.941413644910323E-4]:1.230623361846E1)[&rate=3.3463164790819617E-4]:3.007315054923E0,((7[&rate=3.127711449059808E-4]:7.405224186519E0,6[&rate=5.295237023593705E-4]:7.405224186519E0)[&rate=7.930929148350972E-4]:1.434749012153E0,1[&rate=3.749228995664782E-4]:8.839973198672E0)[&rate=7.037859961249325E-4]:6.473575474709E0)[&rate=6.077355501000912E-4]:5.46468471108E1)[&rate=3.6513857614309795E-4]:2.950351074716E0)[&rate=8.371498644216759E-4]:8.526486969747E-1,12[&rate=7.198366130957052E-4]:7.376339555587E1)[&rate=3.749228995664782E-4]:2.020662832387E0)[&rate=4.698798128342713E-4]:4.042041478786E-1,((((33[&rate=5.726652849829668E-4]:5.640319059084E1,13[&rate=2.8882627607631475E-4]:5.640319059084E1)[&rate=2.6127515959781857E-4]:1.386073688442E1,(19[&rate=4.795290057618743E-4]:1.772321736202E1,18[&rate=7.731771059123632E-4]:1.772321736202E1)[&rate=4.5080302175045246E-4]:5.254071011324E1)[&rate=9.180184465772864E-4]:2.102766722736E0,(11[&rate=4.89273163642694E-4]:1.658910594997E1,29[&rate=3.941413644910323E-4]:1.658910594997E1)[&rate=6.595978307798603E-4]:5.577758824802E1)[&rate=3.127711449059808E-4]:2.104229074197E0,((10[&rate=5.19236459853593E-4]:2.529787114429E1,31[&rate=5.091104187669138E-4]:2.529787114429E1)[&rate=2.2625527042442634E-4]:4.900331340396E1,23[&rate=4.795290057618743E-4]:7.430118454825E1)[&rate=3.749228995664782E-4]:1.697387239375E-1)[&rate=3.4503991728950775E-4]:1.717339263947E0)[&rate=6.737353930319007E-4]:3.253259998037E0,(17[&rate=7.544214387129368E-4]:6.906637409058E1,(27[&rate=5.615399158351626E-4]:2.999544425304E1,28[&rate=0.0011380672227444576]:2.999544425304E1)[&rate=6.595978307798603E-4]:3.907092983754E1)[&rate=2.8882627607631475E-4]:1.037514844359E1)[&rate=0.0011380672227444576]:4.684826777971E1);\ntree STATE_18 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55107.989193203604,EEF_ucld_branchRates=-266.168517335019,lnP=-55107.989193203604,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.901499101678172E-4]:6.432815542754E0,9[&rate=0.0012424526694587287]:6.432815542754E0)[&rate=6.710917671905881E-4]:6.34007728269E0,15[&rate=8.139553509342538E-4]:1.277289282544E1)[&rate=7.811239635211544E-4]:1.007816193011E2,(14[&rate=0.0013177025627507883]:4.431760162153E1,24[&rate=9.121510518604724E-4]:4.431760162153E1)[&rate=0.0011326087490347988]:6.923691050505E1)[&rate=3.193121109636076E-4]:1.298411519767E1,(((25[&rate=6.961757940263124E-4]:7.870872969651E1,((12[&rate=9.121510518604724E-4]:7.338507991885E1,(16[&rate=5.386507872486772E-4]:4.040338179798E1,((22[&rate=8.901499101678172E-4]:3.558574226266E0,21[&rate=4.0127612537553043E-4]:3.558574226266E0)[&rate=7.365257678052527E-4]:6.773835594906E0,20[&rate=6.130240660966053E-4]:1.033240982117E1)[&rate=0.0012424526694587287]:3.007097197681E1)[&rate=0.0014190139752666567]:3.298169812087E1)[&rate=3.355002141254822E-4]:2.513229787435E0,(((30[&rate=6.130240660966053E-4]:5.470721365309E1,26[&rate=5.593836233582823E-4]:5.470721365309E1)[&rate=9.121510518604724E-4]:8.565483861557E0,32[&rate=3.502799929766801E-4]:6.327269751465E1)[&rate=4.456891812553701E-4]:7.937948623335E0,((((4[&rate=0.0010898176834783474]:2.107766872221E0,3[&rate=2.519446732150179E-4]:2.107766872221E0)[&rate=3.8938227261411625E-4]:3.934031917792E-1,2[&rate=6.3557818399442E-4]:2.501170064001E0)[&rate=6.3557818399442E-4]:7.165919578443E0,5[&rate=5.181255781187556E-4]:9.667089642444E0)[&rate=3.6403353576627666E-4]:3.573475695282E0,((7[&rate=4.8741025438541667E-4]:8.850671530135E0,6[&rate=7.50855425062406E-4]:8.850671530135E0)[&rate=4.456891812553701E-4]:1.268487269741E0,1[&rate=4.239878242831944E-4]:1.011915879988E1)[&rate=4.3493912970669E-4]:3.121406537849E0)[&rate=5.593836233582823E-4]:5.797008080026E1)[&rate=5.489826400145201E-4]:4.687663568305E0)[&rate=5.698706965416856E-4]:2.810419990222E0)[&rate=5.07896573635833E-4]:1.287885151112E0,((((11[&rate=4.6674251776796395E-4]:1.672505616658E1,29[&rate=5.911712884186903E-4]:1.672505616658E1)[&rate=5.593836233582823E-4]:5.891976849923E1,(33[&rate=9.611023675350458E-4]:6.353051344182E1,13[&rate=4.6674251776796395E-4]:6.353051344182E1)[&rate=5.489826400145201E-4]:1.211431122399E1)[&rate=0.0010188706897049764]:1.11304233315E0,(19[&rate=7.811239635211544E-4]:1.9577877511E1,18[&rate=6.242035907587395E-4]:1.9577877511E1)[&rate=3.8938227261411625E-4]:5.717998948797E1)[&rate=8.139553509342538E-4]:2.310539503629E0,((10[&rate=6.130240660966053E-4]:3.325315432695E1,31[&rate=5.07896573635833E-4]:3.325315432695E1)[&rate=4.3493912970669E-4]:4.46507936094E1,23[&rate=4.7711079393141924E-4]:7.790394793635E1)[&rate=8.315263240811577E-4]:1.164458566244E0)[&rate=7.50855425062406E-4]:9.282083450276E-1)[&rate=6.710917671905881E-4]:4.151794711775E0,(17[&rate=8.499979529494374E-4]:7.483537119704E1,(27[&rate=4.1278660635779704E-4]:3.486722617287E1,28[&rate=0.0012424526694587287]:3.486722617287E1)[&rate=7.657027589676421E-4]:3.996814502417E1)[&rate=9.611023675350458E-4]:9.313038362351E0)[&rate=0.0013177025627507883]:4.239021776486E1);\ntree STATE_19 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55124.2057170475,EEF_ucld_branchRates=-266.168517335019,lnP=-55124.2057170475,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.493417010500502E-4]:7.791353937659E0,9[&rate=0.001557620367623235]:7.791353937659E0)[&rate=4.614410768772295E-4]:6.369841425831E0,15[&rate=4.614410768772295E-4]:1.416119536349E1)[&rate=8.69492073058587E-4]:8.978410078825E1,(14[&rate=0.0012449540722595464]:4.284743901432E1,24[&rate=0.0012449540722595464]:4.284743901432E1)[&rate=0.0011880782445117311]:6.109785713742E1)[&rate=7.877293121546733E-4]:1.804246022327E1,(((25[&rate=6.274991794316059E-4]:7.353898119445E1,((((16[&rate=5.343145826798609E-4]:3.404258146905E1,((22[&rate=5.853947012549252E-4]:4.493473487512E0,21[&rate=3.0383899693477026E-4]:4.493473487512E0)[&rate=3.7602845849495244E-4]:3.6116140851E0,20[&rate=9.521784746829063E-4]:8.105087572612E0)[&rate=0.0010998313561239293]:2.593749389644E1)[&rate=0.0011880782445117311]:3.162949772349E1,((30[&rate=8.183188072976597E-4]:4.732596507844E1,26[&rate=5.139131596308786E-4]:4.732596507844E1)[&rate=7.074973499036084E-4]:1.290945112786E1,32[&rate=4.3918672161076533E-4]:6.02354162063E1)[&rate=5.546593802832314E-4]:5.436662986241E0)[&rate=9.76592057479047E-4]:3.914196259611E0,12[&rate=9.76592057479047E-4]:6.958627545215E1)[&rate=4.1560395954885456E-4]:5.986178841108E-1,((((4[&rate=8.345889885042045E-4]:2.248700960113E0,3[&rate=5.75097339214739E-4]:2.248700960113E0)[&rate=4.275978487294785E-4]:1.535232386654E-1,2[&rate=6.719091981385685E-4]:2.402224198778E0)[&rate=6.383396227698032E-4]:6.409881579153E0,5[&rate=8.027223624033441E-4]:8.812105777932E0)[&rate=5.036388536750526E-4]:1.55689301517E0,((7[&rate=2.7535994841271927E-4]:6.901638922428E0,1[&rate=4.7221812779165584E-4]:6.901638922428E0)[&rate=5.036388536750526E-4]:1.222218415549E0,6[&rate=5.75097339214739E-4]:8.123857337977E0)[&rate=8.883349468360984E-4]:2.245141455124E0)[&rate=6.274991794316059E-4]:5.981589454316E1)[&rate=4.932836967294983E-4]:3.354087858187E0)[&rate=0.0010998313561239293]:6.278441597535E-1,((((11[&rate=7.877293121546733E-4]:1.602897494916E1,29[&rate=4.614410768772295E-4]:1.602897494916E1)[&rate=8.516147254041381E-4]:5.055666762737E1,(33[&rate=9.08279963924997E-4]:6.052400809282E1,13[&rate=4.7221812779165584E-4]:6.052400809282E1)[&rate=5.853947012549252E-4]:6.061634483709E0)[&rate=5.343145826798609E-4]:2.60459457382E0,(19[&rate=6.719091981385685E-4]:1.203616954534E1,18[&rate=8.345889885042045E-4]:1.203616954534E1)[&rate=3.8997457354453306E-4]:5.715406760501E1)[&rate=7.877293121546733E-4]:1.920803775918E0,((10[&rate=5.343145826798609E-4]:2.327032116691E1,31[&rate=7.199231328859089E-4]:2.327032116691E1)[&rate=6.493417010500502E-4]:4.723501333558E1,23[&rate=3.610084319417902E-4]:7.050533450249E1)[&rate=3.610084319417902E-4]:6.057064237805E-1)[&rate=5.957667485360641E-4]:3.055784427929E0)[&rate=6.605247489599863E-4]:4.127531265988E0,(17[&rate=9.08279963924997E-4]:7.0424888936E1,(27[&rate=7.593171038305255E-4]:2.589367306633E1,28[&rate=0.001032007165044626]:2.589367306633E1)[&rate=9.08279963924997E-4]:4.453121586967E1)[&rate=5.648578991723382E-4]:7.869467684191E0)[&rate=0.001878877617909416]:4.369339975483E1);\ntree STATE_20 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55155.251432595986,EEF_ucld_branchRates=-266.168517335019,lnP=-55155.251432595986,RHOD_ucld_branchRates=-266.168517335019] = [&R] 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STATE_21 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.968391203874,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.968391203874,RHOD_ucld_branchRates=-266.168517335019] = [&R] 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STATE_22 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55131.59860775896,EEF_ucld_branchRates=-266.168517335019,lnP=-55131.59860775896,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=8.306012800252581E-4]:7.213687636348E0,9[&rate=5.861174742267083E-4]:7.213687636348E0)[&rate=7.606574067669981E-4]:8.874903099499E0,15[&rate=9.157114070895015E-4]:1.608859073585E1)[&rate=8.306012800252581E-4]:9.495614236845E1,(14[&rate=0.001190711584254777]:4.884553192923E1,24[&rate=6.342727343788983E-4]:4.884553192923E1)[&rate=0.001060968202744154]:6.219920117507E1)[&rate=3.841891764680352E-4]:3.998606964009E0,(((25[&rate=6.59794083153021E-4]:7.151634401412E1,((((30[&rate=9.669224981676951E-4]:5.089480182972E1,26[&rate=5.406686659087487E-4]:5.089480182972E1)[&rate=0.0015224380449208466]:7.426678184291E0,32[&rate=4.529977803298421E-4]:5.832148001401E1)[&rate=3.5893224441887523E-4]:9.856239952788E0,((((4[&rate=0.0014043336010761054]:1.947678100918E0,2[&rate=9.669224981676951E-4]:1.947678100918E0)[&rate=5.518450634211008E-4]:1.704710261733E0,3[&rate=3.454853862208925E-4]:3.652388362651E0)[&rate=8.119608544227841E-4]:6.001604931763E0,5[&rate=3.71791945750637E-4]:9.653993294414E0)[&rate=7.941454243253212E-4]:2.928684272001E0,((7[&rate=5.076246849850297E-4]:7.034129667086E0,6[&rate=7.606574067669981E-4]:7.034129667086E0)[&rate=5.518450634211008E-4]:8.883568549422E-1,1[&rate=5.185769953314012E-4]:7.922486522028E0)[&rate=4.1945386011925194E-4]:4.660191044387E0)[&rate=6.219082282704042E-4]:5.559504240038E1)[&rate=2.590971985978672E-4]:1.773093243095E0,((16[&rate=4.307682850992932E-4]:3.221173663642E1,((22[&rate=4.4193785483551004E-4]:3.239986683506E0,21[&rate=2.3130458582499395E-4]:3.239986683506E0)[&rate=0.0011417543207619218]:3.021653860288E0,20[&rate=4.307682850992932E-4]:6.261640543794E0)[&rate=0.0011417543207619218]:2.595009609262E1)[&rate=0.001248006779432821]:3.411408777783E1,12[&rate=7.148010530934151E-4]:6.632582441425E1)[&rate=5.518450634211008E-4]:3.624988795645E0)[&rate=0.0014043336010761054]:1.565530804222E0)[&rate=4.1945386011925194E-4]:3.561942729801E0,((((11[&rate=8.925676498670243E-4]:1.721635169221E1,29[&rate=4.529977803298421E-4]:1.721635169221E1)[&rate=8.119608544227841E-4]:5.155764303879E1,(33[&rate=7.004730070518115E-4]:6.089475784864E1,13[&rate=4.307682850992932E-4]:6.089475784864E1)[&rate=5.185769953314012E-4]:7.879236882358E0)[&rate=8.707756408664671E-4]:7.74640690559E-1,(19[&rate=6.219082282704042E-4]:1.64795486297E1,18[&rate=6.219082282704042E-4]:1.64795486297E1)[&rate=3.1607154622755664E-4]:5.306908679186E1)[&rate=5.295854361210119E-4]:3.850465859863E0,((10[&rate=5.861174742267083E-4]:2.504509479919E1,31[&rate=9.955605926304564E-4]:2.504509479919E1)[&rate=3.71791945750637E-4]:4.723820137262E1,23[&rate=4.529977803298421E-4]:7.228329617181E1)[&rate=8.925676498670243E-4]:1.115805109616E0)[&rate=4.4193785483551004E-4]:1.679185462494E0)[&rate=6.342727343788983E-4]:1.598540437058E0,(17[&rate=7.606574067669981E-4]:6.754671067246E1,(27[&rate=8.306012800252581E-4]:2.395586593991E1,28[&rate=8.306012800252581E-4]:2.395586593991E1)[&rate=5.861174742267083E-4]:4.359084473256E1)[&rate=4.1945386011925194E-4]:9.130116508509E0)[&rate=0.001705367972151901]:3.836651288734E1);\ntree STATE_23 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55151.10687253794,EEF_ucld_branchRates=-266.168517335019,lnP=-55151.10687253794,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.733400106445564E-4]:8.011739726933E0,9[&rate=0.0012031754742512144]:8.011739726933E0)[&rate=4.4341920271890185E-4]:5.401419109279E0,15[&rate=2.912720009263897E-4]:1.341315883621E1)[&rate=8.762102824569377E-4]:1.101571143742E2,(14[&rate=7.592943619057822E-4]:5.000563904019E1,24[&rate=6.145540394226147E-4]:5.000563904019E1)[&rate=0.0012031754742512144]:7.356463417023E1)[&rate=8.385815424580827E-4]:5.314572104775E0,(((25[&rate=8.212416702824886E-4]:7.520709755847E1,(12[&rate=8.212416702824886E-4]:7.101134182073E1,(((16[&rate=6.360373908496868E-4]:3.845924306731E1,((22[&rate=7.889523919556517E-4]:2.466796280363E0,21[&rate=7.059369822834136E-4]:2.466796280363E0)[&rate=0.0010273685195108986]:4.287915904644E0,20[&rate=7.452860288838153E-4]:6.754712185007E0)[&rate=0.0010273685195108986]:3.170453088231E1)[&rate=8.967933417228087E-4]:2.816679845315E1,((((4[&rate=4.327948505180505E-4]:1.540744983411E0,2[&rate=0.0013652372604493594]:1.540744983411E0)[&rate=7.592943619057822E-4]:1.290149201999E0,3[&rate=0.001062165923898783]:2.83089418541E0)[&rate=5.434282551894182E-4]:1.013652592077E1,5[&rate=3.464199625619159E-4]:1.296742010618E1)[&rate=9.188080406094449E-4]:1.836779751744E0,((7[&rate=4.538355649916614E-4]:8.360756423443E0,6[&rate=6.470633387487818E-4]:8.360756423443E0)[&rate=5.23717030628618E-4]:9.881404052304E-1,1[&rate=4.6408436405271465E-4]:9.348896828673E0)[&rate=4.327948505180505E-4]:5.455303029254E0)[&rate=4.4341920271890185E-4]:5.182184166253E1)[&rate=4.10717893345381E-4]:2.094216823152E0,((30[&rate=6.935769023747324E-4]:4.703366864549E1,26[&rate=6.360373908496868E-4]:4.703366864549E1)[&rate=9.96299927418965E-4]:8.468512931171E0,32[&rate=5.633015390468667E-4]:5.550218157666E1)[&rate=6.360373908496868E-4]:1.321807676695E1)[&rate=8.04729749892991E-4]:2.291083477118E0)[&rate=6.470633387487818E-4]:4.19575573774E0)[&rate=3.991322067246575E-4]:8.967626264101E-1,((((33[&rate=5.937017625625744E-4]:6.108672654358E1,13[&rate=2.912720009263897E-4]:6.108672654358E1)[&rate=5.23717030628618E-4]:9.957573483943E0,(11[&rate=4.6408436405271465E-4]:1.678689256976E1,29[&rate=7.738300549397457E-4]:1.678689256976E1)[&rate=9.188080406094449E-4]:5.425740745776E1)[&rate=8.385815424580827E-4]:1.797820226269E0,(19[&rate=5.434282551894182E-4]:2.093400052822E1,18[&rate=5.335607715414979E-4]:2.093400052822E1)[&rate=4.538355649916614E-4]:5.190811972557E1)[&rate=9.425031462154423E-4]:1.281267765847E0,((10[&rate=3.8706207270168265E-4]:2.569063231015E1,31[&rate=4.6408436405271465E-4]:2.569063231015E1)[&rate=4.941477417023862E-4]:4.608403965209E1,23[&rate=3.743816099190181E-4]:7.177467196224E1)[&rate=7.317532439525805E-4]:2.348716057394E0)[&rate=5.335607715414979E-4]:1.980472165244E0)[&rate=4.327948505180505E-4]:3.688437763967E0,(17[&rate=7.889523919556517E-4]:7.015960936284E1,(27[&rate=6.25207565327436E-4]:2.366037461202E1,28[&rate=0.0012031754742512144]:2.366037461202E1)[&rate=4.4341920271890185E-4]:4.649923475081E1)[&rate=6.040580598898777E-4]:9.632688586008E0)[&rate=0.0018201260923608933]:4.909254736634E1);\ntree STATE_24 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.099267745405,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.099267745405,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.7476312293384374E-4]:7.88093604643E0,9[&rate=8.234165193594261E-4]:7.88093604643E0)[&rate=5.352013119603402E-4]:8.419060470606E0,15[&rate=6.372977251980447E-4]:1.629999651704E1)[&rate=6.253467161905357E-4]:1.042091207751E2,(14[&rate=9.73885482454357E-4]:4.89855926709E1,24[&rate=9.482149789272512E-4]:4.89855926709E1)[&rate=0.001064734294280731]:7.152352462122E1)[&rate=4.132491924722523E-4]:5.70434490875E0,((((((16[&rate=3.325855168234456E-4]:3.745750177655E1,((22[&rate=0.0012445048495680379]:2.958836672565E0,21[&rate=3.622725836475443E-4]:2.958836672565E0)[&rate=9.242715992493518E-4]:6.372058155881E0,20[&rate=4.132491924722523E-4]:9.330894828446E0)[&rate=0.0013106719967786703]:2.81266069481E1)[&rate=0.0015064040769493222]:3.081073652827E1,(((((4[&rate=5.90595985930543E-4]:1.589560546844E0,2[&rate=4.699997112232875E-4]:1.589560546844E0)[&rate=5.681518494903769E-4]:4.812500207561E-1,3[&rate=7.144730001125443E-4]:2.0708105676E0)[&rate=4.36508911777722E-4]:1.029963180313E1,5[&rate=4.918226996298926E-4]:1.237044237073E1)[&rate=5.134975624546192E-4]:2.072299784407E0,((7[&rate=4.0118660237130766E-4]:7.694407531288E0,6[&rate=0.0010317001767666007]:7.694407531288E0)[&rate=7.893879944410368E-4]:1.723325791104E0,1[&rate=3.622725836475443E-4]:9.417733322392E0)[&rate=4.36508911777722E-4]:5.025008832746E0)[&rate=6.618796866868943E-4]:5.004888924425E1,((30[&rate=9.242715992493518E-4]:4.883298375917E1,26[&rate=0.0010015852326454616]:4.883298375917E1)[&rate=0.0011425217012434987]:6.548873195541E0,32[&rate=5.793141077656839E-4]:5.538185695471E1)[&rate=8.415721537341447E-4]:9.109774444683E0)[&rate=8.415721537341447E-4]:3.776606905431E0)[&rate=5.461135876863122E-4]:1.956473890156E0,12[&rate=7.893879944410368E-4]:7.022471219498E1)[&rate=0.0013106719967786703]:9.921957230517E-1,25[&rate=8.415721537341447E-4]:7.121690791803E1)[&rate=5.243356771291592E-4]:1.761640858288E0,((((11[&rate=5.352013119603402E-4]:1.499483092035E1,29[&rate=6.618796866868943E-4]:1.499483092035E1)[&rate=8.606117871277955E-4]:5.244872384198E1,(33[&rate=6.135929792866382E-4]:6.157180157286E1,13[&rate=4.4781673365169156E-4]:6.157180157286E1)[&rate=4.2500303787233875E-4]:5.871753189464E0)[&rate=4.36508911777722E-4]:1.600482693617E0,(19[&rate=8.060491788983889E-4]:1.859677580529E1,18[&rate=3.7581090577740894E-4]:1.859677580529E1)[&rate=7.579087902508236E-4]:5.044726165065E1)[&rate=6.618796866868943E-4]:1.192728606725E0,((10[&rate=7.893879944410368E-4]:2.149611147368E1,31[&rate=5.243356771291592E-4]:2.149611147368E1)[&rate=4.2500303787233875E-4]:4.829561904041E1,23[&rate=4.589683883943232E-4]:6.979173051409E1)[&rate=6.494677012290392E-4]:4.450355485773E-1)[&rate=4.589683883943232E-4]:2.741782713652E0)[&rate=6.494677012290392E-4]:2.653594109466E0,(17[&rate=0.001064734294280731]:6.690994039838E1,(27[&rate=7.144730001125443E-4]:2.796460412504E1,28[&rate=9.73885482454357E-4]:2.796460412504E1)[&rate=8.606117871277955E-4]:3.894533627334E1)[&rate=2.463815763482357E-4]:8.722202487405E0)[&rate=0.0016799319767232016]:5.058131931509E1);\ntree STATE_25 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55133.54873380309,EEF_ucld_branchRates=-266.168517335019,lnP=-55133.54873380309,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.9147285856247195E-4]:8.173183096519E0,9[&rate=8.143781828224616E-4]:8.173183096519E0)[&rate=4.156474322614012E-4]:8.735495367781E0,15[&rate=5.115583619712337E-4]:1.69086784643E1)[&rate=8.8064112061869E-4]:1.010836425687E2,(14[&rate=0.0010555537481518865]:4.972838070335E1,24[&rate=0.0010207836918755067]:4.972838070335E1)[&rate=0.0011355154828000444]:6.826394032966E1)[&rate=4.993742632883034E-4]:1.178592184822E1,((((((16[&rate=2.470870355411002E-4]:4.284381472516E1,((22[&rate=6.435980992640667E-4]:3.658796743773E0,21[&rate=4.276063177870558E-4]:3.658796743773E0)[&rate=3.4086869728733045E-4]:4.460158187041E0,20[&rate=5.747037934758157E-4]:8.118954930815E0)[&rate=0.0014553993534517848]:3.472485979435E1)[&rate=0.0017185997004242387]:3.038537724325E1,(((30[&rate=9.589879795261333E-4]:4.924259479887E1,26[&rate=4.036147393243707E-4]:4.924259479887E1)[&rate=9.589879795261333E-4]:1.198862952761E1,32[&rate=3.6669064370178326E-4]:6.123122432648E1)[&rate=6.734977004948781E-4]:1.030645103532E1,((((4[&rate=2.470870355411002E-4]:2.119115937468E0,2[&rate=6.435980992640667E-4]:2.119115937468E0)[&rate=0.0019576056538517595]:7.767462627953E-1,3[&rate=0.0010207836918755067]:2.895862200263E0)[&rate=5.87927518630544E-4]:1.067372106625E1,5[&rate=3.2737359499432497E-4]:1.356958326651E1)[&rate=6.435980992640667E-4]:1.850617275052E0,((7[&rate=4.5142435226431436E-4]:9.149432083017E0,6[&rate=8.574231350838069E-4]:9.149432083017E0)[&rate=4.872901086235675E-4]:2.254788394284E0,1[&rate=3.539438902590613E-4]:1.14042204773E1)[&rate=8.143781828224616E-4]:4.015980064259E0)[&rate=6.292102681220622E-4]:5.611747482024E1)[&rate=0.0010935679185995952]:1.691516606609E0)[&rate=6.014027757605835E-4]:1.348945149704E0,12[&rate=9.589879795261333E-4]:7.457813711812E1)[&rate=7.051372855936251E-4]:1.43428163821E0,25[&rate=5.87927518630544E-4]:7.601241875633E1)[&rate=4.993742632883034E-4]:1.069927573256E0,((((11[&rate=8.143781828224616E-4]:1.337707797553E1,29[&rate=0.0012352829368172881]:1.337707797553E1)[&rate=9.051823307353437E-4]:5.605812824541E1,(33[&rate=8.8064112061869E-4]:6.181080479531E1,13[&rate=3.6669064370178326E-4]:6.181080479531E1)[&rate=3.7918090429176914E-4]:7.624401425628E0)[&rate=4.036147393243707E-4]:1.925606415298E0,(19[&rate=6.583493221634288E-4]:2.179601353008E1,18[&rate=5.115583619712337E-4]:2.179601353008E1)[&rate=5.115583619712337E-4]:4.956479910616E1)[&rate=7.38860436057362E-4]:2.021374505021E0,((10[&rate=8.353779839440136E-4]:2.08041030607E1,31[&rate=0.0011823240764984584]:2.08041030607E1)[&rate=4.276063177870558E-4]:5.074921830633E1,23[&rate=3.7918090429176914E-4]:7.155332136702E1)[&rate=3.1333848451668196E-4]:1.828865774237E0)[&rate=3.9147285856247195E-4]:3.700159188321E0)[&rate=5.238630524555457E-4]:4.223960165094E0,(17[&rate=8.353779839440136E-4]:7.12757882786E1,(27[&rate=4.5142435226431436E-4]:3.325810315451E1,28[&rate=9.589879795261333E-4]:3.325810315451E1)[&rate=8.353779839440136E-4]:3.801768512409E1)[&rate=1.9772198890520554E-4]:1.003051821608E1)[&rate=0.0014553993534517848]:4.847193638655E1);\ntree STATE_26 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55120.6002295403,EEF_ucld_branchRates=-266.168517335019,lnP=-55120.6002295403,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.903144721201903E-4]:1.042544895684E1,9[&rate=6.261244713629012E-4]:1.042544895684E1)[&rate=5.775147548618147E-4]:5.80576926096E0,15[&rate=6.136060948901627E-4]:1.62312182178E1)[&rate=8.940757175416415E-4]:9.922099316108E1,(14[&rate=0.0010053563641445483]:4.841910493554E1,24[&rate=8.285342728524506E-4]:4.841910493554E1)[&rate=8.089936993277209E-4]:6.703310644334E1)[&rate=8.285342728524506E-4]:1.322585863414E1,((((((16[&rate=3.903144721201903E-4]:3.828884718836E1,((22[&rate=0.001039734960929364]:3.476175402261E0,21[&rate=5.10015990005466E-4]:3.476175402261E0)[&rate=0.0010779379805749114]:4.914718509595E0,20[&rate=1.748070996359765E-4]:8.390893911855E0)[&rate=0.0012978002512941788]:2.989795327651E1)[&rate=9.740797446322901E-4]:3.45753241067E1,(((30[&rate=7.903878780782313E-4]:5.116716036018E1,26[&rate=5.209603668532543E-4]:5.116716036018E1)[&rate=0.0012978002512941788]:7.725055620049E0,32[&rate=4.56110324941187E-4]:5.889221598023E1)[&rate=3.291715914107245E-4]:1.285948580928E1,((((4[&rate=4.12705961962952E-4]:2.93582931845E0,2[&rate=4.56110324941187E-4]:2.93582931845E0)[&rate=2.450865415812791E-4]:3.305101534236E-1,3[&rate=8.285342728524506E-4]:3.266339471873E0)[&rate=7.903878780782313E-4]:8.26000835845E0,5[&rate=3.903144721201903E-4]:1.152634783032E1)[&rate=7.234878637271453E-4]:4.513850456929E0,((7[&rate=3.903144721201903E-4]:8.761176488842E0,6[&rate=4.015976310636382E-4]:8.761176488842E0)[&rate=4.12705961962952E-4]:1.048561646216E0,1[&rate=4.2367926175457905E-4]:9.809738135059E0)[&rate=0.001505551372568411]:6.230460152193E0)[&rate=6.389280550313043E-4]:5.571150350225E1)[&rate=3.5488888316876325E-4]:1.112469505549E0)[&rate=7.726155329826111E-4]:2.687351308304E0,12[&rate=8.940757175416415E-4]:7.555152260336E1)[&rate=4.2367926175457905E-4]:2.852398846775E0,25[&rate=7.726155329826111E-4]:7.840392145014E1)[&rate=5.658975116679521E-4]:8.455988946389E-1,((((11[&rate=6.793396491512761E-4]:1.400549607063E1,29[&rate=6.01347317356406E-4]:1.400549607063E1)[&rate=8.709191418707708E-4]:5.35667483986E1,(33[&rate=8.709191418707708E-4]:6.047980118067E1,13[&rate=5.320024467706047E-4]:6.047980118067E1)[&rate=3.903144721201903E-4]:7.092443288557E0)[&rate=3.291715914107245E-4]:5.59379701143E0,(19[&rate=4.345517048235722E-4]:2.408516097331E1,18[&rate=2.6623725938250496E-4]:2.408516097331E1)[&rate=4.56110324941187E-4]:4.908088050734E1)[&rate=8.089936993277209E-4]:3.332912007366E0,((10[&rate=6.136060948901627E-4]:2.04138871157E1,31[&rate=4.991511534489875E-4]:2.04138871157E1)[&rate=4.991511534489875E-4]:5.410939028226E1,23[&rate=4.668472142727088E-4]:7.452327739796E1)[&rate=8.709191418707708E-4]:1.975676090056E0)[&rate=6.261244713629012E-4]:2.750566856755E0)[&rate=9.453668911413456E-4]:4.51163651019E0,(17[&rate=5.775147548618147E-4]:7.695309843141E1,(27[&rate=5.10015990005466E-4]:3.115151110414E1,28[&rate=0.0012978002512941788]:3.115151110414E1)[&rate=6.520445336261696E-4]:4.580158732727E1)[&rate=8.285342728524506E-4]:6.808058423555E0)[&rate=0.0013859456784206473]:4.491691315806E1);\ntree STATE_27 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.6354293579,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.6354293579,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.6941559425179495E-4]:8.186378922423E0,9[&rate=6.464031407847066E-4]:8.186378922423E0)[&rate=5.061929911599962E-4]:6.296730501664E0,15[&rate=6.134607302397474E-4]:1.448310942409E1)[&rate=8.362741118485404E-4]:9.646099097155E1,(14[&rate=0.0012742924071094705]:4.454063379608E1,24[&rate=6.820639382506874E-4]:4.454063379608E1)[&rate=0.0011227117085937555]:6.640346659956E1)[&rate=9.908584346661135E-4]:8.784792558563E0,((((((16[&rate=3.4844128382660665E-4]:3.818287300225E1,((22[&rate=9.030115307697507E-4]:2.942091360127E0,21[&rate=3.3588287238860734E-4]:2.942091360127E0)[&rate=3.8233840133932416E-4]:5.02621505051E0,20[&rate=8.789961195588283E-4]:7.968306410637E0)[&rate=7.989550575156367E-4]:3.021456659161E1)[&rate=0.0010279058965115394]:3.000942010434E1,(((30[&rate=7.355017372522286E-4]:4.602515252634E1,26[&rate=5.061929911599962E-4]:4.602515252634E1)[&rate=7.656715465047379E-4]:8.121814389845E0,32[&rate=6.029603923866958E-4]:5.414696691619E1)[&rate=8.568492438141847E-4]:9.131853526697E0,((((4[&rate=7.818743213080396E-4]:2.179438360063E0,2[&rate=7.077928711158399E-4]:2.179438360063E0)[&rate=4.029366747511004E-4]:5.156948343054E-1,3[&rate=6.029603923866958E-4]:2.695133194369E0)[&rate=0.0011227117085937555]:1.086532218654E1,5[&rate=3.715296819835555E-4]:1.356045538091E1)[&rate=6.029603923866958E-4]:1.791292544782E0,((7[&rate=4.029366747511004E-4]:8.690293823264E0,6[&rate=5.628004663485998E-4]:8.690293823264E0)[&rate=7.213729655281962E-4]:2.596135941345E0,1[&rate=3.4844128382660665E-4]:1.128642976461E1)[&rate=4.321344258575211E-4]:4.065318161078E0)[&rate=7.213729655281962E-4]:4.79270725172E1)[&rate=4.8779240248801066E-4]:4.9134726637E0)[&rate=7.989550575156367E-4]:9.143684909511E-1,12[&rate=7.656715465047379E-4]:6.910666159754E1)[&rate=4.321344258575211E-4]:2.802289698461E0,25[&rate=8.170380154705676E-4]:7.1908951296E1)[&rate=4.029366747511004E-4]:9.977815272249E-1,((((11[&rate=5.154428518793253E-4]:1.670109551317E1,29[&rate=4.321344258575211E-4]:1.670109551317E1)[&rate=8.568492438141847E-4]:4.949742727488E1,(33[&rate=9.292823744853958E-4]:5.332322811681E1,13[&rate=5.531303020741833E-4]:5.332322811681E1)[&rate=4.128502606666994E-4]:1.287529467125E1)[&rate=4.22570282567127E-4]:9.554924437596E-1,(19[&rate=6.134607302397474E-4]:1.556064663713E1,18[&rate=6.029603923866958E-4]:1.556064663713E1)[&rate=3.075197153665836E-4]:5.159336859469E1)[&rate=4.6019212910736244E-4]:2.07553039564E0,((10[&rate=7.656715465047379E-4]:2.058142152333E1,31[&rate=4.6019212910736244E-4]:2.058142152333E1)[&rate=5.926633724480712E-4]:4.792719002521E1,23[&rate=4.321344258575211E-4]:6.850861154855E1)[&rate=4.128502606666994E-4]:7.209340789098E-1)[&rate=5.341186688021905E-4]:3.677187195766E0)[&rate=4.509191789110659E-4]:3.372681619596E0,(17[&rate=8.170380154705676E-4]:7.01020751622E1,(27[&rate=2.709393724228811E-4]:3.395683359181E1,28[&rate=0.0011227117085937555]:3.395683359181E1)[&rate=4.786095425861748E-4]:3.614524157039E1)[&rate=5.628004663485998E-4]:6.177339280621E0)[&rate=7.355017372522286E-4]:4.344947851139E1);\ntree STATE_28 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55140.71766048652,EEF_ucld_branchRates=-266.168517335019,lnP=-55140.71766048652,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.960708476727161E-4]:9.808773305514E0,9[&rate=4.776393701358584E-4]:9.808773305514E0)[&rate=9.654024195225677E-4]:6.086234715942E0,15[&rate=7.436879433949868E-4]:1.589500802146E1)[&rate=5.712047296161358E-4]:1.041703013508E2,(14[&rate=9.104381003403188E-4]:4.043382268289E1,24[&rate=0.0011284928430587066]:4.043382268289E1)[&rate=8.440603404013136E-4]:7.963148668938E1)[&rate=0.0010344782037690352]:9.289068958016E0,((((((16[&rate=4.4021574201124464E-4]:3.88106141339E1,((22[&rate=5.145164181001073E-4]:2.942484065917E0,21[&rate=6.43550139190971E-4]:2.942484065917E0)[&rate=5.424925061917413E-4]:5.171321547008E0,20[&rate=8.86560314005066E-4]:8.113805612924E0)[&rate=0.0011284928430587066]:3.069680852098E1)[&rate=0.0016988018208742778]:3.123193594314E1,(((30[&rate=7.898989465411502E-4]:5.022193798197E1,26[&rate=7.436879433949868E-4]:5.022193798197E1)[&rate=4.2084034026752695E-4]:1.291142411684E1,32[&rate=4.868619105324113E-4]:6.313336209881E1)[&rate=7.436879433949868E-4]:6.574238087986E0,((((4[&rate=3.9015792586891455E-4]:2.179045799886E0,2[&rate=3.7928068216263136E-4]:2.179045799886E0)[&rate=8.440603404013136E-4]:5.836284436975E-1,3[&rate=6.113729960122972E-4]:2.762674243583E0)[&rate=4.4021574201124464E-4]:1.400363808925E1,5[&rate=2.778194730735305E-4]:1.676631233283E1)[&rate=4.2084034026752695E-4]:1.432015540846E0,((7[&rate=4.496963091497279E-4]:1.279937918287E1,6[&rate=4.590777032288949E-4]:1.279937918287E1)[&rate=6.113729960122972E-4]:1.55494728886E0,1[&rate=3.679446349808012E-4]:1.435432647173E1)[&rate=4.496963091497279E-4]:3.844001401944E0)[&rate=7.436879433949868E-4]:5.150927231312E1)[&rate=5.810113354330564E-4]:3.349498902416E-1)[&rate=7.898989465411502E-4]:2.27459540359E0,12[&rate=7.737571185932862E-4]:7.231714548063E1)[&rate=6.66311938289105E-4]:3.546979811635E0,25[&rate=6.43550139190971E-4]:7.586412529227E1)[&rate=4.0066607454615174E-4]:1.198707450069E0,((((33[&rate=8.24914361987709E-4]:5.815820464637E1,13[&rate=2.978471313525928E-4]:5.815820464637E1)[&rate=4.306078997156629E-4]:1.056067700376E1,(11[&rate=6.010775181693174E-4]:1.830947634312E1,29[&rate=4.590777032288949E-4]:1.830947634312E1)[&rate=6.010775181693174E-4]:5.040940530701E1)[&rate=6.547825763610909E-4]:2.672840064703E0,(19[&rate=8.069103554496241E-4]:1.152596652684E1,18[&rate=8.645322480940321E-4]:1.152596652684E1)[&rate=3.4337566472316045E-4]:5.986575518799E1)[&rate=8.440603404013136E-4]:3.601786805055E0,((10[&rate=6.113729960122972E-4]:1.750414687301E1,31[&rate=8.24914361987709E-4]:1.750414687301E1)[&rate=4.960708476727161E-4]:5.635867098973E1,23[&rate=4.4021574201124464E-4]:7.386281786274E1)[&rate=5.237853172032244E-4]:1.130690657146E0)[&rate=4.776393701358584E-4]:2.069324222451E0)[&rate=4.2084034026752695E-4]:4.265920667554E0,(17[&rate=7.160562700414259E-4]:7.460611317771E1,(27[&rate=3.4337566472316045E-4]:2.865049184355E1,28[&rate=9.977074320712477E-4]:2.865049184355E1)[&rate=8.86560314005066E-4]:4.595562133416E1)[&rate=5.810113354330564E-4]:6.722640232182E0)[&rate=7.737571185932862E-4]:4.80256249204E1);\ntree STATE_29 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55129.794636509185,EEF_ucld_branchRates=-266.168517335019,lnP=-55129.794636509185,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.8172473052696E-4]:9.206867550012E0,9[&rate=7.624734298737289E-4]:9.206867550012E0)[&rate=5.217689993200701E-4]:8.67103971363E0,15[&rate=3.4454831077793883E-4]:1.787790726364E1)[&rate=7.269941253380213E-4]:9.858606018488E1,(14[&rate=0.0011575165348884752]:4.668250537025E1,24[&rate=7.624734298737289E-4]:4.668250537025E1)[&rate=7.442713356634284E-4]:6.978146207827E1)[&rate=8.72764102335958E-4]:7.895442781628E0,((((((16[&rate=4.040319474341064E-4]:4.684549211126E1,((22[&rate=5.763266839527458E-4]:4.409766790505E0,21[&rate=3.5484400275438E-4]:4.409766790505E0)[&rate=9.642640201821443E-4]:5.861710206114E0,20[&rate=3.3399735288822303E-4]:1.027147699662E1)[&rate=8.72764102335958E-4]:3.657401511465E1)[&rate=0.0010021307164639853]:2.765211265248E1,(((((4[&rate=5.649595394928279E-4]:3.286029523823E0,2[&rate=6.948117796417444E-4]:3.286029523823E0)[&rate=2.4352053091756937E-4]:2.992787939667E-1,3[&rate=8.240052781732198E-4]:3.58530831779E0)[&rate=4.3279260078539375E-4]:1.019629575887E1,5[&rate=3.649362511780711E-4]:1.378160407666E1)[&rate=5.429515672235606E-4]:3.622703952688E0,((7[&rate=3.5484400275438E-4]:1.00649232558E1,6[&rate=6.121810483599872E-4]:1.00649232558E1)[&rate=2.0019216702859413E-4]:2.038092945586E0,1[&rate=3.649362511780711E-4]:1.210301620139E1)[&rate=3.9438672271803374E-4]:5.301291827958E0)[&rate=4.136338750023068E-4]:5.503125318235E1,((30[&rate=5.322671379926243E-4]:5.120567093934E1,26[&rate=6.948117796417444E-4]:5.120567093934E1)[&rate=3.9438672271803374E-4]:1.224995558155E1,32[&rate=3.8467427909664634E-4]:6.345562652089E1)[&rate=4.040319474341064E-4]:8.979934690808E0)[&rate=4.7144618680923685E-4]:2.06204355205E0)[&rate=8.240052781732198E-4]:2.26786997734E0,12[&rate=5.012578317491164E-4]:7.676547474109E1)[&rate=8.474411144990577E-4]:9.411577515126E-1,25[&rate=5.649595394928279E-4]:7.77066324926E1)[&rate=3.231266552414985E-4]:2.318106061005E0,((((33[&rate=7.624734298737289E-4]:6.398261324415E1,13[&rate=4.6169797533613424E-4]:6.398261324415E1)[&rate=3.649362511780711E-4]:8.405866178292E0,(11[&rate=5.999096235926464E-4]:1.695515390953E1,29[&rate=4.423878106821967E-4]:1.695515390953E1)[&rate=6.948117796417444E-4]:5.543332551291E1)[&rate=5.763266839527458E-4]:8.143193337766E-1,(19[&rate=5.999096235926464E-4]:1.248234748449E1,18[&rate=8.474411144990577E-4]:1.248234748449E1)[&rate=3.9438672271803374E-4]:6.072045127173E1)[&rate=5.429515672235606E-4]:4.027216842862E0,((10[&rate=4.3279260078539375E-4]:1.784895896752E1,31[&rate=0.0010962459524725052]:1.784895896752E1)[&rate=2.7430833061618104E-4]:5.874088640241E1,23[&rate=4.3279260078539375E-4]:7.658984536994E1)[&rate=3.8467427909664634E-4]:6.401702291491E-1)[&rate=3.118537982063007E-4]:2.794722954523E0)[&rate=8.021746985097921E-4]:6.184754844097E0,(17[&rate=6.948117796417444E-4]:7.858839984041E1,(27[&rate=8.021746985097921E-4]:3.182969122478E1,28[&rate=0.0011575165348884752]:3.182969122478E1)[&rate=5.999096235926464E-4]:4.675870861563E1)[&rate=0.0010021307164639853]:7.621093557297E0)[&rate=0.0018681582614768037]:3.814991683245E1);\ntree STATE_30 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55146.84853873062,EEF_ucld_branchRates=-266.168517335019,lnP=-55146.84853873062,RHOD_ucld_branchRates=-266.168517335019] = [&R] 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STATE_31 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.3752470363,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.3752470363,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.52778970427855E-4]:6.71772245889E0,9[&rate=4.424190874599782E-4]:6.71772245889E0)[&rate=4.1171759254246624E-4]:1.272859167766E1,15[&rate=5.063180499680869E-4]:1.944631413655E1)[&rate=7.075886621723801E-4]:9.993919086305E1,(14[&rate=8.524722169145591E-4]:5.133557109333E1,24[&rate=9.390866118587179E-4]:5.133557109333E1)[&rate=6.908415774465502E-4]:6.804993390627E1)[&rate=5.896220814679888E-4]:9.639957866343E0,((((((16[&rate=3.502006242356142E-4]:3.619328248984E1,((22[&rate=9.077196632478096E-4]:2.773002026316E0,21[&rate=4.7379388491762065E-4]:2.773002026316E0)[&rate=6.300974157969632E-4]:5.196302479321E0,20[&rate=5.523432500741697E-4]:7.969304505637E0)[&rate=0.0011644003633728929]:2.82239779842E1)[&rate=0.0010121564737436764]:3.335862838427E1,(((((4[&rate=6.161945302018636E-4]:2.318290461709E0,3[&rate=3.606237703106146E-4]:2.318290461709E0)[&rate=7.434635860072854E-4]:4.252425436179E-1,2[&rate=2.9495074156152593E-4]:2.743533005327E0)[&rate=5.644652801811244E-4]:1.014875784024E1,5[&rate=3.606237703106146E-4]:1.289229084557E1)[&rate=0.0013261063540181697]:3.208657860953E0,((7[&rate=3.0661597709936934E-4]:1.109632751992E1,6[&rate=7.627841595976633E-4]:1.109632751992E1)[&rate=0.0011056359822729724]:6.615082531269E-1,1[&rate=3.0661597709936934E-4]:1.175783577305E1)[&rate=3.606237703106146E-4]:4.343112933474E0)[&rate=5.644652801811244E-4]:5.2284391939E1,((30[&rate=7.627841595976633E-4]:5.10040949884E1,26[&rate=4.6323142845214365E-4]:5.10040949884E1)[&rate=3.606237703106146E-4]:9.601396471386E0,32[&rate=3.811829285174663E-4]:6.060549145979E1)[&rate=4.0154798180535374E-4]:7.779849185739E0)[&rate=6.300974157969632E-4]:1.166570228586E0)[&rate=8.048083138496528E-4]:2.1801238989E0,12[&rate=8.278331243940449E-4]:7.173203477301E1)[&rate=2.059566932950806E-4]:3.501394306281E0,25[&rate=5.523432500741697E-4]:7.523342907929E1)[&rate=2.059566932950806E-4]:8.907691094599E-1,((((11[&rate=8.278331243940449E-4]:1.92169390943E1,29[&rate=4.6323142845214365E-4]:1.92169390943E1)[&rate=5.644652801811244E-4]:5.075546709951E1,(33[&rate=9.736488793936712E-4]:6.024303474642E1,13[&rate=3.811829285174663E-4]:6.024303474642E1)[&rate=7.250996991978289E-4]:9.729371447386E0)[&rate=3.811829285174663E-4]:1.608166805086E0,(19[&rate=8.048083138496528E-4]:1.341683573405E1,18[&rate=0.0010121564737436764]:1.341683573405E1)[&rate=4.321342435850917E-4]:5.816373726484E1)[&rate=7.831838211330526E-4]:3.415798885978E0,((10[&rate=5.174995152183044E-4]:2.161758393507E1,31[&rate=3.2888601469625254E-4]:2.161758393507E1)[&rate=4.1171759254246624E-4]:5.250951673418E1,23[&rate=4.1171759254246624E-4]:7.412710066925E1)[&rate=3.0661597709936934E-4]:8.692712156194E-1)[&rate=7.627841595976633E-4]:1.127826303879E0)[&rate=0.0016425596747470692]:3.412988799031E0,(17[&rate=9.390866118587179E-4]:6.534577303202E1,(27[&rate=3.502006242356142E-4]:2.728351608548E1,28[&rate=7.250996991978289E-4]:2.728351608548E1)[&rate=5.644652801811244E-4]:3.806225694655E1)[&rate=2.415991429580193E-4]:1.419141395576E1)[&rate=0.001449510077729178]:4.948827587816E1);\ntree STATE_32 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55133.928835337036,EEF_ucld_branchRates=-266.168517335019,lnP=-55133.928835337036,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.031560140059146E-4]:6.505818671482E0,9[&rate=0.001239038262532476]:6.505818671482E0)[&rate=5.71057443915998E-4]:9.567627223999E0,15[&rate=5.471336653016367E-4]:1.607344589548E1)[&rate=9.703622500924103E-4]:9.315091060872E1,(14[&rate=0.001125356121527823]:4.40210258119E1,24[&rate=4.6833967209726425E-4]:4.40210258119E1)[&rate=0.001039492760536983]:6.520333069231E1)[&rate=0.0014077206095905095]:1.999951241596E1,((((((16[&rate=4.4661195828691783E-4]:3.088097334835E1,((22[&rate=0.0015361896116283494]:2.895448087877E0,21[&rate=4.902908115261922E-4]:2.895448087877E0)[&rate=8.395196772162355E-4]:6.45853800669E0,20[&rate=3.582450154653724E-4]:9.353986094567E0)[&rate=9.703622500924103E-4]:2.152698725379E1)[&rate=9.703622500924103E-4]:3.953625749916E1,(((((4[&rate=3.8101967377796335E-4]:1.932742055134E0,2[&rate=6.218841462865998E-4]:1.932742055134E0)[&rate=5.239662616048965E-4]:8.908584124578E-1,3[&rate=2.262920128218332E-4]:2.823600467591E0)[&rate=7.599117400220138E-4]:9.143526619177E0,5[&rate=3.2192801373764733E-4]:1.196712708677E1)[&rate=2.646713600169429E-4]:3.714100868994E0,((7[&rate=4.357819261570697E-4]:1.026638321297E1,6[&rate=3.4649666471765333E-4]:1.026638321297E1)[&rate=7.977096304954903E-4]:1.303278430244E0,1[&rate=3.921473751746849E-4]:1.156966164322E1)[&rate=3.3442026004278417E-4]:4.111566312545E0)[&rate=6.933169212198266E-4]:5.315201464014E1,((30[&rate=5.959096270843827E-4]:5.22336379023E1,26[&rate=6.218841462865998E-4]:5.22336379023E1)[&rate=7.253152566876658E-4]:1.096041247467E1,32[&rate=3.921473751746849E-4]:6.319405037698E1)[&rate=6.781432051434982E-4]:5.639192218922E0)[&rate=6.634538609921072E-4]:1.583988251614E0)[&rate=0.002194240689533166]:2.5879719786E0,12[&rate=8.622652948599426E-4]:7.300520282612E1)[&rate=8.395196772162355E-4]:6.575384329942E-1,25[&rate=8.864714168659573E-4]:7.366274125911E1)[&rate=6.492060141041475E-4]:1.482345498202E0,(((19[&rate=8.180517493351567E-4]:1.873565426806E1,18[&rate=4.031560140059146E-4]:1.873565426806E1)[&rate=3.8101967377796335E-4]:5.363480540426E1,((11[&rate=4.5745765064940136E-4]:2.109748011497E1,29[&rate=4.140789653008104E-4]:2.109748011497E1)[&rate=6.087433812394271E-4]:4.874910233569E1,(33[&rate=7.599117400220138E-4]:6.091854468882E1,13[&rate=3.582450154653724E-4]:6.091854468882E1)[&rate=4.140789653008104E-4]:8.92803776184E0)[&rate=9.703622500924103E-4]:2.523877221657E0)[&rate=4.792777155672929E-4]:1.405194436919E0,((10[&rate=5.013975984889435E-4]:2.719239025302E1,31[&rate=8.180517493351567E-4]:2.719239025302E1)[&rate=2.262920128218332E-4]:4.562186448071E1,23[&rate=5.589906759436227E-4]:7.281425473373E1)[&rate=7.977096304954903E-4]:9.613993755061E-1)[&rate=6.087433812394271E-4]:1.369432648075E0)[&rate=3.8101967377796335E-4]:6.108445943956E0,(17[&rate=0.0011776341883834752]:6.851241453326E1,(27[&rate=4.4661195828691783E-4]:3.341560483397E1,28[&rate=9.123608653708172E-4]:3.341560483397E1)[&rate=7.783657218332745E-4]:3.509680969929E1)[&rate=5.126165633670391E-4]:1.274111816801E1)[&rate=8.180517493351567E-4]:4.797033621889E1);\ntree STATE_33 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55132.15583397838,EEF_ucld_branchRates=-266.168517335019,lnP=-55132.15583397838,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.8313811765572885E-4]:8.277732993737E0,9[&rate=7.022186034213433E-4]:8.277732993737E0)[&rate=4.632190846050816E-4]:6.165380664359E0,15[&rate=2.7993266891059666E-4]:1.44431136581E1)[&rate=8.007630689825537E-4]:9.721787666827E1,(14[&rate=0.0015874933155215184]:4.800161853749E1,24[&rate=8.961528153641692E-4]:4.800161853749E1)[&rate=0.0012148068938390194]:6.365937178888E1)[&rate=7.736384740666215E-4]:1.46465652461E1,((((((16[&rate=3.619052861810251E-4]:3.512091812871E1,((22[&rate=0.0011403325167684728]:4.214354375103E0,21[&rate=3.104784903190988E-4]:4.214354375103E0)[&rate=7.245764595646921E-4]:4.846982992789E0,20[&rate=2.901446886738343E-4]:9.061337367891E0)[&rate=8.961528153641692E-4]:2.605958076082E1)[&rate=9.762991838851309E-4]:3.985325563233E1,(((((4[&rate=3.2065235943633816E-4]:1.942604578454E0,2[&rate=2.7993266891059666E-4]:1.942604578454E0)[&rate=3.8313811765572885E-4]:7.687820043067E-1,3[&rate=5.015707665618452E-4]:2.71138658276E0)[&rate=5.582830547028909E-4]:1.194757461403E1,5[&rate=9.39029441073894E-5]:1.465896119679E1)[&rate=8.961528153641692E-4]:2.421228665418E0,((7[&rate=1.9125438991971609E-4]:1.051565087058E1,6[&rate=3.5146861296180107E-4]:1.051565087058E1)[&rate=2.2696360365283112E-4]:9.240164393847E-1,1[&rate=2.7993266891059666E-4]:1.143966730997E1)[&rate=8.299751231452357E-4]:5.640522552243E0)[&rate=7.245764595646921E-4]:5.521064003382E1,((30[&rate=7.022186034213433E-4]:5.013459796504E1,26[&rate=5.89731479018194E-4]:5.013459796504E1)[&rate=3.8313811765572885E-4]:1.204047681947E1,32[&rate=3.003174727468885E-4]:6.217507478451E1)[&rate=5.582830547028909E-4]:1.011575511153E1)[&rate=2.5926063877513173E-4]:2.683343864997E0)[&rate=0.002474226485228632]:7.004106093832E-1,12[&rate=5.737098845902199E-4]:7.567458437042E1)[&rate=4.884431399494666E-4]:2.034503309412E0,25[&rate=8.007630689825537E-4]:7.770908767983E1)[&rate=4.161637173012407E-4]:1.989250333003E0,(((19[&rate=8.961528153641692E-4]:1.61033702242E1,18[&rate=7.736384740666215E-4]:1.61033702242E1)[&rate=2.6965012724017393E-4]:5.909518430665E1,((11[&rate=3.104784903190988E-4]:2.348853455633E1,29[&rate=2.4872077802977116E-4]:2.348853455633E1)[&rate=6.237981510512977E-4]:4.983854383572E1,(33[&rate=7.483196375783033E-4]:6.310234342154E1,13[&rate=3.4112705576945984E-4]:6.310234342154E1)[&rate=5.290132196505338E-4]:1.02247349705E1)[&rate=7.245764595646921E-4]:1.871476138806E0)[&rate=3.003174727468885E-4]:1.094568854001E0,((10[&rate=4.5106759416288164E-4]:2.398080343172E1,31[&rate=5.015707665618452E-4]:2.398080343172E1)[&rate=4.161637173012407E-4]:5.034813652561E1,23[&rate=5.290132196505338E-4]:7.432893995733E1)[&rate=2.5926063877513173E-4]:1.964183427519E0)[&rate=4.5106759416288164E-4]:3.405214627984E0)[&rate=3.104784903190988E-4]:1.684941139151E0,(17[&rate=6.610466561823494E-4]:6.939391899879E1,(27[&rate=1.463547273426599E-4]:3.01977060807E1,28[&rate=6.419833039831087E-4]:3.01977060807E1)[&rate=0.0011403325167684728]:3.919621291809E1)[&rate=2.2696360365283112E-4]:1.19893601532E1)[&rate=0.0015874933155215184]:4.492427642049E1);\ntree STATE_34 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55131.00331870173,EEF_ucld_branchRates=-266.168517335019,lnP=-55131.00331870173,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.542552018188383E-4]:7.278409787561E0,9[&rate=6.564510141123168E-4]:7.278409787561E0)[&rate=5.277660281470275E-4]:6.319540216539E0,15[&rate=7.940309510950135E-4]:1.35979500041E1)[&rate=9.242081858901678E-4]:8.764980100548E1,(14[&rate=7.940309510950135E-4]:4.55657507427E1,24[&rate=0.001014004263361372]:4.55657507427E1)[&rate=0.001629098116962156]:5.568200026689E1)[&rate=0.001137871874497968]:2.464489842708E1,((((((((30[&rate=6.435093226010557E-4]:5.026911800518E1,26[&rate=5.170879886926286E-4]:5.026911800518E1)[&rate=3.6756005998326386E-4]:1.373586706862E1,32[&rate=4.43811476278961E-4]:6.400498507379E1)[&rate=4.6467301534505685E-4]:9.145052445648E0,((((4[&rate=4.227493404543816E-4]:1.906355937245E0,2[&rate=9.515531126474297E-4]:1.906355937245E0)[&rate=9.515531126474297E-4]:5.953817341287E-1,3[&rate=5.064987423281247E-4]:2.501737671374E0)[&rate=6.975460614585562E-4]:1.057478317321E1,5[&rate=3.790568126423792E-4]:1.307652084458E1)[&rate=6.975460614585562E-4]:2.536162627894E0,((7[&rate=6.697473678898233E-4]:9.452777994389E0,6[&rate=9.813163322383094E-4]:9.452777994389E0)[&rate=4.542552018188383E-4]:1.786118343869E0,1[&rate=7.762290428511893E-4]:1.123889633826E1)[&rate=3.4341993728585334E-4]:4.373787134219E0)[&rate=3.790568126423792E-4]:5.753735404696E1)[&rate=7.592146328146416E-4]:1.944266221239E0,(16[&rate=4.120754016238206E-4]:3.840261506186E1,((22[&rate=0.0013417903287754416]:2.595260197706E0,21[&rate=3.902721220681051E-4]:2.595260197706E0)[&rate=4.120754016238206E-4]:9.045093356644E0,20[&rate=1.784003484515904E-4]:1.164035355435E1)[&rate=8.323967550210683E-4]:2.676226150751E1)[&rate=0.0014545161971881073]:3.669168867882E1)[&rate=0.0010911334569830924]:2.681450063639E0,12[&rate=8.753075008086558E-4]:7.777575380432E1)[&rate=6.185671840875535E-4]:1.039461350979E0,25[&rate=6.185671840875535E-4]:7.88152151553E1)[&rate=4.43811476278961E-4]:1.773191416267E0,(((19[&rate=7.940309510950135E-4]:1.536683910295E1,18[&rate=6.834329432048742E-4]:1.536683910295E1)[&rate=4.43811476278961E-4]:6.055722619273E1,((11[&rate=3.0245045082288494E-4]:2.318822072449E1,29[&rate=4.012627500593491E-4]:2.318822072449E1)[&rate=7.272312575634321E-4]:5.160152751478E1,(33[&rate=8.988940286301705E-4]:6.189808015986E1,13[&rate=4.8551612340910413E-4]:6.189808015986E1)[&rate=5.831099664171907E-4]:1.289166807941E1)[&rate=3.0245045082288494E-4]:1.13431705641E0)[&rate=6.065117524093762E-4]:1.22548121081E0,((10[&rate=6.564510141123168E-4]:2.302496817176E1,31[&rate=8.753075008086558E-4]:2.302496817176E1)[&rate=5.494586529473409E-4]:5.141372536616E1,23[&rate=5.717195692932298E-4]:7.443869353792E1)[&rate=5.064987423281247E-4]:2.710852968573E0)[&rate=3.557112163852169E-4]:3.438860065072E0)[&rate=8.532069844328745E-4]:1.598328086157E0,(17[&rate=8.323967550210683E-4]:7.399556651321E1,(27[&rate=4.012627500593491E-4]:2.863542246202E1,28[&rate=8.753075008086558E-4]:2.863542246202E1)[&rate=5.831099664171907E-4]:4.53601440512E1)[&rate=2.479812123353225E-4]:8.191168144505E0)[&rate=0.001137871874497968]:4.370591477895E1);\ntree STATE_35 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55114.1134672862,EEF_ucld_branchRates=-266.168517335019,lnP=-55114.1134672862,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=6.955528338933501E-4]:7.927185116134E0,9[&rate=7.519733328436986E-4]:7.927185116134E0)[&rate=6.461522760207562E-4]:5.324892056458E0,15[&rate=4.534125669968609E-4]:1.325207717259E1)[&rate=7.226997959955858E-4]:9.951922298852E1,(14[&rate=9.296971672565506E-4]:5.276327594094E1,24[&rate=7.519733328436986E-4]:5.276327594094E1)[&rate=0.0011090867489392182]:6.000802422017E1)[&rate=3.2046664357955466E-4]:1.454468352348E1,((((((((30[&rate=6.461522760207562E-4]:4.899683065672E1,26[&rate=4.036179538448876E-4]:4.899683065672E1)[&rate=6.826504227016899E-4]:1.009070883512E1,32[&rate=3.9310734751397334E-4]:5.908753949184E1)[&rate=4.7265679824977033E-4]:7.957897172604E0,((((4[&rate=4.036179538448876E-4]:2.390393682452E0,3[&rate=6.015042745334696E-4]:2.390393682452E0)[&rate=0.0013274019851362178]:4.075436473525E-1,2[&rate=6.461522760207562E-4]:2.797937329804E0)[&rate=5.206549297434891E-4]:1.00177100356E1,5[&rate=2.8803752704152603E-4]:1.281564736541E1)[&rate=7.519733328436986E-4]:2.940241705532E0,((7[&rate=3.2046664357955466E-4]:1.261651929139E1,6[&rate=6.123133630041144E-4]:1.261651929139E1)[&rate=9.296971672565506E-4]:1.190256172828E0,1[&rate=4.918021422456336E-4]:1.380677546421E1)[&rate=7.838894061213176E-4]:1.949113606726E0)[&rate=4.138901660049568E-4]:5.128954759351E1)[&rate=1.9875597128735014E-4]:5.079992062908E0,(16[&rate=4.534125669968609E-4]:3.627673341688E1,((22[&rate=5.804630918510973E-4]:3.27427073656E0,21[&rate=0.0010233649336536229]:3.27427073656E0)[&rate=4.138901660049568E-4]:5.223968849567E0,20[&rate=7.838894061213176E-4]:8.498239586126E0)[&rate=8.805983591297407E-4]:2.777849383075E1)[&rate=0.001233954865262643]:3.584869531047E1)[&rate=8.383266320813607E-4]:1.063858719654E0,12[&rate=7.838894061213176E-4]:7.318928744701E1)[&rate=5.908940682870152E-4]:3.195858048509E0,25[&rate=8.805983591297407E-4]:7.638514549552E1)[&rate=6.701396696330817E-4]:1.413544239252E0,(((19[&rate=4.437005080379725E-4]:1.579228560064E1,18[&rate=6.701396696330817E-4]:1.579228560064E1)[&rate=4.036179538448876E-4]:5.460139143919E1,((11[&rate=4.036179538448876E-4]:2.321872483446E1,29[&rate=5.109968510682673E-4]:2.321872483446E1)[&rate=8.010477820789281E-4]:4.650537560823E1,(33[&rate=8.587430605124715E-4]:5.661503412559E1,13[&rate=4.534125669968609E-4]:5.661503412559E1)[&rate=7.370419587114917E-4]:1.310906631711E1)[&rate=3.823022381792754E-4]:6.695765971339E-1)[&rate=4.036179538448876E-4]:4.233423618679E0,((10[&rate=3.595082820994329E-4]:2.700133680796E1,31[&rate=4.7265679824977033E-4]:2.700133680796E1)[&rate=5.401728151149252E-4]:4.676908081088E1,23[&rate=5.109968510682673E-4]:7.377041761884E1)[&rate=8.383266320813607E-4]:8.566830396693E-1)[&rate=9.041431306711395E-4]:3.171589076258E0)[&rate=4.3389580233781934E-4]:2.586570867305E0,(17[&rate=8.805983591297407E-4]:6.852046175974E1,(27[&rate=6.015042745334696E-4]:2.615098140078E1,28[&rate=0.0013274019851362178]:2.615098140078E1)[&rate=5.908940682870152E-4]:4.236948035895E1)[&rate=4.63057138167151E-4]:1.186479884233E1)[&rate=0.0013274019851362178]:4.693072308252E1);\ntree STATE_36 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55127.820752460815,EEF_ucld_branchRates=-266.168517335019,lnP=-55127.820752460815,RHOD_ucld_branchRates=-266.168517335019] = [&R] 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STATE_37 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55100.41569701832,EEF_ucld_branchRates=-266.168517335019,lnP=-55100.41569701832,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.008944245009175E-4]:9.011731128748E0,9[&rate=4.7760444139708475E-4]:9.011731128748E0)[&rate=6.318912100450975E-4]:6.852797305253E0,15[&rate=7.883889047153635E-4]:1.5864528434E1)[&rate=6.772497006034407E-4]:9.544607650725E1,(14[&rate=0.0014042872210225286]:4.396093360909E1,24[&rate=0.0014042872210225286]:4.396093360909E1)[&rate=0.0010739687739907719]:6.734967133216E1)[&rate=8.625945688028441E-4]:1.66136261398E1,(((25[&rate=7.57045259065675E-4]:7.447597201015E1,(((16[&rate=2.0971469470177067E-4]:4.162210325784E1,((22[&rate=0.0012738900649748306]:3.291519265502E0,21[&rate=4.210045171071777E-4]:3.291519265502E0)[&rate=4.210045171071777E-4]:4.604277439306E0,20[&rate=5.516287929507339E-4]:7.895796704808E0)[&rate=8.625945688028441E-4]:3.372630655303E1)[&rate=0.0010739687739907719]:2.865880217384E1,(((30[&rate=7.883889047153635E-4]:4.792330372812E1,26[&rate=4.959658652683034E-4]:4.792330372812E1)[&rate=7.019559486150385E-4]:9.591020277174E0,32[&rate=4.591107021816338E-4]:5.751432400529E1)[&rate=6.772497006034407E-4]:6.117551594769E0,((((4[&rate=5.805525893150549E-4]:2.684446854834E0,3[&rate=7.57045259065675E-4]:2.684446854834E0)[&rate=2.525037919262159E-4]:1.689639671668E-1,2[&rate=3.5638774068260217E-4]:2.853410822001E0)[&rate=4.497626059181228E-4]:8.264242173314E0,5[&rate=3.1522660642978805E-4]:1.111765299531E1)[&rate=5.143388293491342E-4]:1.936719305147E0,((7[&rate=4.210045171071777E-4]:8.678776171308E0,6[&rate=9.628498444156778E-4]:8.678776171308E0)[&rate=3.904182455614432E-4]:1.170353338113E0,1[&rate=5.707892721320559E-4]:9.849129509421E0)[&rate=3.5638774068260217E-4]:3.205242791041E0)[&rate=5.904598204204804E-4]:5.05775032996E1)[&rate=7.019559486150385E-4]:6.649029831615E0)[&rate=5.707892721320559E-4]:2.589164298629E0,12[&rate=8.053050146780069E-4]:7.28700697303E1)[&rate=4.867922470162448E-4]:1.605902279844E0)[&rate=4.110712739054605E-4]:1.935402527626E0,(((19[&rate=8.232067410795184E-4]:2.11488487283E1,18[&rate=6.894051703435004E-4]:2.11488487283E1)[&rate=4.008944245009175E-4]:5.102939776355E1,((11[&rate=4.008944245009175E-4]:1.692208855192E1,29[&rate=6.539795303115497E-4]:1.692208855192E1)[&rate=8.053050146780069E-4]:5.363350944705E1,(33[&rate=5.904598204204804E-4]:5.67704460411E1,13[&rate=4.6838394932865616E-4]:5.67704460411E1)[&rate=6.428015592967512E-4]:1.378515195787E1)[&rate=9.082256075194421E-4]:1.622648492882E0)[&rate=4.497626059181228E-4]:8.371776944209E-1,((10[&rate=7.57045259065675E-4]:2.837571125358E1,31[&rate=4.3073972863332606E-4]:2.837571125358E1)[&rate=4.7760444139708475E-4]:4.341812300126E1,23[&rate=8.232067410795184E-4]:7.179383425484E1)[&rate=5.707892721320559E-4]:1.221589931438E0)[&rate=7.149440578332835E-4]:3.3959503515E0)[&rate=5.235703285594263E-4]:3.71679141492E0,(17[&rate=8.625945688028441E-4]:7.287253464141E1,(27[&rate=4.008944245009175E-4]:2.942346574355E1,28[&rate=0.0012738900649748306]:2.942346574355E1)[&rate=7.883889047153635E-4]:4.344906889786E1)[&rate=4.867922470162448E-4]:7.255631311283E0)[&rate=0.0010739687739907719]:4.779606512836E1);\ntree STATE_38 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55142.34858739371,EEF_ucld_branchRates=-266.168517335019,lnP=-55142.34858739371,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.7593390412241615E-4]:1.128453767221E1,9[&rate=5.120167544203494E-4]:1.128453767221E1)[&rate=2.4612679596302926E-4]:7.045435707993E0,15[&rate=4.7593390412241615E-4]:1.83299733802E1)[&rate=0.0010131341646191455]:9.631206797761E1,(14[&rate=0.0015436403272377297]:4.331503428449E1,24[&rate=9.679326360199737E-4]:4.331503428449E1)[&rate=6.81885692316831E-4]:7.132700707332E1)[&rate=0.0010648792922968117]:1.070241036158E1,(((25[&rate=9.679326360199737E-4]:7.144568539248E1,(12[&rate=9.472439748438469E-4]:7.144446814974E1,((16[&rate=7.058084871821155E-4]:3.534647745666E1,((22[&rate=5.463583225712241E-4]:3.439102314845E0,21[&rate=4.36544626390831E-4]:3.439102314845E0)[&rate=6.701720005658637E-4]:4.208504858606E0,20[&rate=4.501853467915935E-4]:7.647607173451E0)[&rate=0.0015436403272377297]:2.769887028321E1)[&rate=8.910756944762019E-4]:3.282809417544E1,(((30[&rate=9.276186306027548E-4]:4.774944856688E1,26[&rate=4.88232496343585E-4]:4.774944856688E1)[&rate=0.0014384415830891151]:9.175275932769E0,32[&rate=3.726398863819391E-4]:5.692472449965E1)[&rate=5.236027179390186E-4]:7.912332098384E0,((((4[&rate=8.263487552781389E-4]:2.004785910254E0,3[&rate=4.7593390412241615E-4]:2.004785910254E0)[&rate=7.69532735662572E-4]:6.185013296545E-1,2[&rate=6.585972701545557E-4]:2.623287239909E0)[&rate=7.305318540798441E-4]:8.404952747051E0,5[&rate=3.2832269930965953E-4]:1.102823998696E1)[&rate=7.83153712212516E-4]:3.396271188542E0,((7[&rate=6.81885692316831E-4]:7.51175898561E0,6[&rate=8.263487552781389E-4]:7.51175898561E0)[&rate=6.93757782321898E-4]:2.098851533011E0,1[&rate=5.799016798643577E-4]:9.610610518621E0)[&rate=4.88232496343585E-4]:4.813900656881E0)[&rate=5.236027179390186E-4]:5.041254542253E1)[&rate=5.120167544203494E-4]:3.337515034073E0)[&rate=6.245198790139762E-4]:3.26989651764E0)[&rate=9.472439748438469E-4]:1.217242741248E-3)[&rate=0.0010131341646191455]:3.24372793639E0,(((19[&rate=0.0012003649119132476]:1.526468694514E1,18[&rate=0.0010380549488153631]:1.526468694514E1)[&rate=4.36544626390831E-4]:5.402445735164E1,((11[&rate=5.910254498651832E-4]:1.558965627505E1,29[&rate=0.0012974541230855654]:1.558965627505E1)[&rate=4.501853467915935E-4]:5.172020186376E1,(33[&rate=8.263487552781389E-4]:6.126005235008E1,13[&rate=6.133150873221203E-4]:6.126005235008E1)[&rate=6.93757782321898E-4]:6.049805788738E0)[&rate=8.575132578767027E-4]:1.979286157971E0)[&rate=0.002059150678896681]:2.051719868671E0,((10[&rate=5.002418995439331E-4]:2.530851066076E1,31[&rate=5.687644294908693E-4]:2.530851066076E1)[&rate=5.350386726772109E-4]:4.599013925146E1,23[&rate=6.357896128556575E-4]:7.129864991222E1)[&rate=0.0010939666376536962]:4.221425323881E-2)[&rate=8.739622191135632E-4]:3.348549163419E0)[&rate=8.115228610530668E-4]:5.183310901283E0,(17[&rate=9.679326360199737E-4]:7.294992952097E1,(27[&rate=8.739622191135632E-4]:2.715851181257E1,28[&rate=0.0011609629998015295]:2.715851181257E1)[&rate=5.687644294908693E-4]:4.57914177084E1)[&rate=9.089311325336518E-4]:6.922794709184E0)[&rate=0.001360058806164613]:4.547172748924E1);\ntree STATE_39 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55132.34321308806,EEF_ucld_branchRates=-266.168517335019,lnP=-55132.34321308806,RHOD_ucld_branchRates=-266.168517335019] = [&R] 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STATE_40 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55144.55479300203,EEF_ucld_branchRates=-266.168517335019,lnP=-55144.55479300203,RHOD_ucld_branchRates=-266.168517335019] = [&R] 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STATE_41 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55140.96694267298,EEF_ucld_branchRates=-266.168517335019,lnP=-55140.96694267298,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.988674925122007E-4]:1.043689047176E1,9[&rate=5.058889965524765E-4]:1.043689047176E1)[&rate=2.4941543506937745E-4]:4.83045015668E0,15[&rate=9.132082699401146E-4]:1.526734062844E1)[&rate=8.318168442553656E-4]:1.035526475369E2,(14[&rate=0.00142615782472543]:4.553408589455E1,24[&rate=8.504582666961033E-4]:4.553408589455E1)[&rate=7.971679162523477E-4]:7.328590227078E1)[&rate=0.0010210387738082613]:6.397996069538E0,((((12[&rate=9.905145293690654E-4]:7.533219818484E1,(((((4[&rate=5.264642961069288E-4]:1.912853849069E0,2[&rate=0.0013234790459352378]:1.912853849069E0)[&rate=9.132082699401146E-4]:7.435696501323E-1,3[&rate=7.654182332212986E-4]:2.656423499202E0)[&rate=7.654182332212986E-4]:1.248357860229E1,5[&rate=3.869432354197096E-4]:1.51400021015E1)[&rate=4.853089407304815E-4]:1.415151625279E0,((7[&rate=4.5404954817196766E-4]:9.559288008933E0,6[&rate=8.909914235419271E-4]:9.559288008933E0)[&rate=2.985193062479921E-4]:1.256668673813E0,1[&rate=5.896166536640857E-4]:1.081595668275E1)[&rate=3.1676210513098107E-4]:5.739197044028E0)[&rate=6.343082915030767E-4]:5.518334425888E1,(((30[&rate=6.825422987726087E-4]:5.842448684577E1,26[&rate=6.1160601754234E-4]:5.842448684577E1)[&rate=7.654182332212986E-4]:6.164940330566E0,32[&rate=3.869432354197096E-4]:6.458942717634E1)[&rate=5.16167540148099E-4]:6.660923322771E0,(16[&rate=3.988674925122007E-4]:3.242386911328E1,((22[&rate=8.701342138032625E-4]:3.284312348937E0,21[&rate=4.1041034163159513E-4]:3.284312348937E0)[&rate=5.896166536640857E-4]:7.975588048879E0,20[&rate=7.504479402456898E-4]:1.125990039782E1)[&rate=0.0019348362196393116]:2.116396871546E1)[&rate=8.701342138032625E-4]:3.882648138583E1)[&rate=7.360020646330965E-4]:4.881474865434E-1)[&rate=6.700693478909562E-4]:3.593700199181E0)[&rate=7.360020646330965E-4]:1.614503148307E-1,25[&rate=5.896166536640857E-4]:7.549364849967E1)[&rate=3.7454271853246715E-4]:1.642580146972E0,(((19[&rate=8.701342138032625E-4]:1.545733146932E1,18[&rate=6.005319252345768E-4]:1.545733146932E1)[&rate=3.7454271853246715E-4]:5.642752373783E1,((11[&rate=6.005319252345768E-4]:2.22382604358E1,29[&rate=4.1041034163159513E-4]:2.22382604358E1)[&rate=7.504479402456898E-4]:4.82625558205E1,(33[&rate=0.001054843752334472]:5.952525684885E1,13[&rate=4.1041034163159513E-4]:5.952525684885E1)[&rate=4.5404954817196766E-4]:1.097555940745E1)[&rate=4.7496519138178443E-4]:1.384038950855E0)[&rate=9.905145293690654E-4]:1.421697975266E0,((10[&rate=7.220305670650937E-4]:2.063529370569E1,31[&rate=4.434207066278796E-4]:2.063529370569E1)[&rate=2.985193062479921E-4]:5.246589938567E1,23[&rate=4.6455430218954904E-4]:7.310119309136E1)[&rate=5.058889965524765E-4]:2.0536009106E-1)[&rate=7.654182332212986E-4]:3.829675464218E0)[&rate=6.228580832360526E-4]:1.185608470405E0,(17[&rate=0.0011360694639734488]:7.058571658017E1,(27[&rate=4.3263301442972047E-4]:2.712045854725E1,28[&rate=9.370046689971604E-4]:2.712045854725E1)[&rate=8.504582666961033E-4]:4.346525803292E1)[&rate=5.681897643302158E-4]:7.736120536869E0)[&rate=0.0015840400836317327]:4.689614711783E1);\ntree STATE_42 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55145.30263896374,EEF_ucld_branchRates=-266.168517335019,lnP=-55145.30263896374,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=2.920800003552209E-4]:7.703462259216E0,9[&rate=8.644366508332302E-4]:7.703462259216E0)[&rate=3.7985457365216814E-4]:8.429615571707E0,15[&rate=4.864814306679694E-4]:1.613307783092E1)[&rate=7.963041900247137E-4]:9.077159797243E1,(14[&rate=0.0011757946616699243]:4.802761296986E1,24[&rate=0.0010269986196701079]:4.802761296986E1)[&rate=9.984883635338491E-4]:5.887706283349E1)[&rate=0.0010927933973366329]:2.168697434658E1,((((12[&rate=9.478564534657445E-4]:6.721066318336E1,((16[&rate=4.864814306679694E-4]:3.362958819224E1,((22[&rate=4.972388885615076E-4]:3.10837600682E0,21[&rate=5.50408045094477E-4]:3.10837600682E0)[&rate=7.963041900247137E-4]:5.114945419446E0,20[&rate=7.809324796812648E-4]:8.223321426266E0)[&rate=0.0014716225656306364]:2.540626676597E1)[&rate=8.835517501705293E-4]:3.168671327312E1,(((30[&rate=7.963041900247137E-4]:4.688796133238E1,26[&rate=6.267592754034485E-4]:4.688796133238E1)[&rate=9.250960133045228E-4]:7.761299029876E0,32[&rate=4.1853174021812967E-4]:5.464926036226E1)[&rate=4.1853174021812967E-4]:8.3706184527E0,((((4[&rate=9.250960133045228E-4]:1.932020677131E0,2[&rate=2.1615533129271222E-4]:1.932020677131E0)[&rate=7.809324796812648E-4]:5.629215565846E-1,3[&rate=6.381637697375828E-4]:2.494942233716E0)[&rate=8.288922392354498E-4]:1.16518003219E1,5[&rate=4.061815748098438E-4]:1.414674255561E1)[&rate=8.644366508332302E-4]:2.32607714826E0,((7[&rate=4.3048225216254707E-4]:1.015774448793E1,6[&rate=9.478564534657445E-4]:1.015774448793E1)[&rate=6.381637697375828E-4]:8.519460318665E-1,1[&rate=5.50408045094477E-4]:1.10096905198E1)[&rate=3.1443142076645054E-4]:5.463129184076E0)[&rate=5.93436149303632E-4]:4.654705911108E1)[&rate=6.15515635831176E-4]:2.296422650394E0)[&rate=6.15515635831176E-4]:1.89436171801E0)[&rate=7.809324796812648E-4]:2.372639640471E0,25[&rate=7.963041900247137E-4]:6.958330282383E1)[&rate=4.061815748098438E-4]:4.06220826455E0,((((11[&rate=4.534774415688267E-4]:1.876467808031E1,29[&rate=5.185613993546539E-4]:1.876467808031E1)[&rate=6.267592754034485E-4]:4.869020828309E1,(33[&rate=9.478564534657445E-4]:5.500339939219E1,13[&rate=6.615349504165037E-4]:5.500339939219E1)[&rate=3.1443142076645054E-4]:1.245148697121E1)[&rate=0.0016322844698275763]:1.336654750797E0,(19[&rate=9.037216918371041E-4]:1.715194295217E1,18[&rate=6.381637697375828E-4]:1.715194295217E1)[&rate=4.3048225216254707E-4]:5.163959816202E1)[&rate=5.397830689284798E-4]:2.39971468124E0,((10[&rate=7.111541339738366E-4]:2.184027018874E1,31[&rate=4.534774415688267E-4]:2.184027018874E1)[&rate=4.1853174021812967E-4]:4.842136607569E1,23[&rate=4.1853174021812967E-4]:7.026163626443E1)[&rate=0.001058225055366865]:9.296195309961E-1)[&rate=7.111541339738366E-4]:2.454255292954E0)[&rate=7.809324796812648E-4]:4.008358278038E0,(17[&rate=7.517419611962864E-4]:6.740256680429E1,(27[&rate=5.291741074700119E-4]:2.661667141988E1,28[&rate=0.0014716225656306364]:2.661667141988E1)[&rate=4.864814306679694E-4]:4.078589538441E1)[&rate=0.0014716225656306364]:1.025130256213E1)[&rate=9.478564534657445E-4]:5.093778078351E1);\ntree STATE_43 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55138.548908553275,EEF_ucld_branchRates=-266.168517335019,lnP=-55138.548908553275,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.1419014849046835E-4]:1.039759783966E1,9[&rate=6.759619958816485E-4]:1.039759783966E1)[&rate=4.1581162496061406E-4]:8.179943095316E0,15[&rate=7.860691520011469E-4]:1.857754093497E1)[&rate=8.367428394828276E-4]:9.312108690729E1,(14[&rate=0.0011073784503783308]:4.283943082598E1,24[&rate=0.0011073784503783308]:4.283943082598E1)[&rate=8.56496658847231E-4]:6.885919701629E1)[&rate=0.0014000459437884432]:1.710994810625E1,((((12[&rate=7.713252958882316E-4]:7.380014879164E1,((16[&rate=5.939985148704459E-4]:4.05076197524E1,((22[&rate=6.970000490024071E-4]:4.096207031646E0,21[&rate=6.863049142318677E-4]:4.096207031646E0)[&rate=4.913621150256415E-4]:6.751091746551E0,20[&rate=7.080875572618298E-4]:1.08472987782E1)[&rate=6.759619958816485E-4]:2.966032097421E1)[&rate=0.0012004708896018903]:3.097245531099E1,(((((4[&rate=6.759619958816485E-4]:2.665395458276E0,3[&rate=4.339493665390688E-4]:2.665395458276E0)[&rate=4.42616783617283E-4]:4.322731695401E-1,2[&rate=6.467140853789835E-4]:3.097668627816E0)[&rate=5.302187050194217E-4]:1.11257888257E1,5[&rate=2.4851141585971177E-4]:1.422345745351E1)[&rate=7.196136009553508E-4]:1.404664474952E0,((7[&rate=7.080875572618298E-4]:1.088536563893E1,6[&rate=6.284275279269907E-4]:1.088536563893E1)[&rate=5.775858132059484E-4]:8.084332546282E-1,1[&rate=4.675158235592779E-4]:1.169379889356E1)[&rate=5.695288101655564E-4]:3.934323034905E0)[&rate=5.695288101655564E-4]:5.243492412393E1,((30[&rate=7.860691520011469E-4]:5.233483004036E1,26[&rate=4.991784437569117E-4]:5.233483004036E1)[&rate=6.467140853789835E-4]:8.373472929551E0,32[&rate=4.339493665390688E-4]:6.070830296991E1)[&rate=4.062215493377317E-4]:7.35474308248E0)[&rate=4.675158235592779E-4]:3.417029011006E0)[&rate=7.713252958882316E-4]:2.320073728243E0)[&rate=5.147144393905096E-4]:1.733687291754E0,25[&rate=8.782149957264873E-4]:7.553383608339E1)[&rate=3.1419014849046835E-4]:1.233248395423E0,((((33[&rate=7.860691520011469E-4]:5.69995734868E1,13[&rate=4.675158235592779E-4]:5.69995734868E1)[&rate=4.062215493377317E-4]:1.312753858307E1,(11[&rate=4.1581162496061406E-4]:1.32272923462E1,29[&rate=6.659360729879755E-4]:1.32272923462E1)[&rate=6.023821773396867E-4]:5.689981972367E1)[&rate=5.775858132059484E-4]:2.197517846045E0,(19[&rate=4.339493665390688E-4]:1.978938956257E1,18[&rate=5.857378277038243E-4]:1.978938956257E1)[&rate=3.4829290701487536E-4]:5.253524035335E1)[&rate=7.442045428766068E-4]:2.718969063263E0,((10[&rate=4.834919730499928E-4]:2.351242001546E1,31[&rate=2.898257698484427E-4]:2.351242001546E1)[&rate=4.1581162496061406E-4]:5.060892926078E1,23[&rate=4.062215493377317E-4]:7.412134927624E1)[&rate=5.147144393905096E-4]:9.222497029401E-1)[&rate=4.991784437569117E-4]:1.723485499639E0)[&rate=5.615536705447738E-4]:3.547262302409E0,(17[&rate=7.316317098152575E-4]:7.021975670511E1,(27[&rate=6.659360729879755E-4]:3.037929369254E1,28[&rate=9.023966270115289E-4]:3.037929369254E1)[&rate=7.080875572618298E-4]:3.984046301257E1)[&rate=7.860691520011469E-4]:1.009459007612E1)[&rate=8.367428394828276E-4]:4.849422916729E1);\ntree STATE_44 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55161.72593721111,EEF_ucld_branchRates=-266.168517335019,lnP=-55161.72593721111,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=3.075498942296498E-4]:9.499997955933E0,9[&rate=4.777560469269576E-4]:9.499997955933E0)[&rate=5.314940929565066E-4]:1.034031043582E1,15[&rate=5.492657550090859E-4]:1.984030839175E1)[&rate=7.070917474507502E-4]:9.06702569276E1,(14[&rate=0.0012423700575887862]:4.646972515889E1,24[&rate=7.997612636474515E-4]:4.646972515889E1)[&rate=0.0012423700575887862]:6.404084016046E1)[&rate=7.437375394134466E-4]:1.74070402285E1,((((((11[&rate=8.88821328046344E-4]:1.57574856806E1,29[&rate=9.608465576299054E-4]:1.57574856806E1)[&rate=7.070917474507502E-4]:5.783233421912E1,(33[&rate=9.106902406142049E-4]:5.756480516057E1,13[&rate=4.08851024340255E-4]:5.756480516057E1)[&rate=3.075498942296498E-4]:1.602501473914E1)[&rate=7.705263813180125E-4]:6.114017274561E-1,(19[&rate=5.048363747619781E-4]:1.332777837342E1,18[&rate=7.568606362520217E-4]:1.332777837342E1)[&rate=4.1956173764178906E-4]:6.087344325376E1)[&rate=4.1956173764178906E-4]:1.860083352401E0,((10[&rate=6.327021259429665E-4]:2.828940835231E1,31[&rate=7.568606362520217E-4]:2.828940835231E1)[&rate=4.685359164666626E-4]:4.602310366972E1,23[&rate=4.958828004719774E-4]:7.431251202203E1)[&rate=4.496395224965875E-4]:1.748792957545E0)[&rate=6.7366725652099E-4]:1.129565972212E0,((12[&rate=7.848007931243338E-4]:7.324052145657E1,((16[&rate=5.403694516066005E-4]:4.225543650921E1,((22[&rate=6.845077969393678E-4]:4.55103022196E0,21[&rate=3.4475669517703447E-4]:4.55103022196E0)[&rate=7.188993911109792E-4]:4.452458936007E0,20[&rate=8.88821328046344E-4]:9.003489157967E0)[&rate=7.070917474507502E-4]:3.325194735125E1)[&rate=9.902111403179484E-4]:2.899689458244E1,(((((4[&rate=6.03903107226097E-4]:2.658467615532E0,3[&rate=4.591746835097254E-4]:2.658467615532E0)[&rate=7.568606362520217E-4]:4.312814910474E-1,2[&rate=4.2988480108298234E-4]:3.08974910658E0)[&rate=4.958828004719774E-4]:1.021984137943E1,5[&rate=3.277660969959996E-4]:1.330959048601E1)[&rate=8.321251008112734E-4]:2.200936733566E0,(1[&rate=4.3989172715697524E-4]:1.112175108672E1,(6[&rate=5.945740391571921E-4]:1.050311365094E1,7[&rate=4.2988480108298234E-4]:1.050311365094E1)[&rate=3.9766055960902637E-4]:6.186374357867E-1)[&rate=4.777560469269576E-4]:4.38877613285E0)[&rate=5.314940929565066E-4]:5.483256969557E1,((30[&rate=6.133565372713593E-4]:5.143904726406E1,26[&rate=5.492657550090859E-4]:5.143904726406E1)[&rate=8.497713405707449E-4]:8.101793263892E0,32[&rate=2.8123200507937206E-4]:5.954084052795E1)[&rate=7.070917474507502E-4]:1.080225638719E1)[&rate=5.945740391571921E-4]:9.092341765113E-1)[&rate=8.497713405707449E-4]:1.988190364919E0)[&rate=8.321251008112734E-4]:1.652694864405E0,25[&rate=6.7366725652099E-4]:7.489321632097E1)[&rate=7.705263813180125E-4]:2.297654630813E0)[&rate=0.0012423700575887862]:5.556737538729E0,(17[&rate=9.106902406142049E-4]:7.03260697609E1,(27[&rate=3.9766055960902637E-4]:3.13943760786E1,28[&rate=6.327021259429665E-4]:3.13943760786E1)[&rate=7.997612636474515E-4]:3.893169368229E1)[&rate=6.03903107226097E-4]:1.242153872962E1)[&rate=0.0012423700575887862]:4.516999705734E1);\ntree STATE_45 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55126.76398413293,EEF_ucld_branchRates=-266.168517335019,lnP=-55126.76398413293,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.753680568889684E-4]:7.858405734945E0,9[&rate=8.516375335182313E-4]:7.858405734945E0)[&rate=5.478517198306347E-4]:8.554521422425E0,15[&rate=6.112264434133929E-4]:1.641292715737E1)[&rate=8.119131396873995E-4]:9.065112668216E1,(14[&rate=0.0012810625076170876]:4.170777599229E1,24[&rate=7.762560221783427E-4]:4.170777599229E1)[&rate=0.0012810625076170876]:6.535627784724E1)[&rate=8.971337723704443E-4]:1.942577600451E1,((((((11[&rate=4.770249485044845E-4]:1.989826043279E1,29[&rate=6.02295069833516E-4]:1.989826043279E1)[&rate=7.877670453876485E-4]:5.061548952531E1,(33[&rate=8.119131396873995E-4]:6.075643073145E1,13[&rate=3.9193294264194394E-4]:6.075643073145E1)[&rate=6.291184222040986E-4]:9.757319226653E0)[&rate=7.03226211741024E-4]:1.377076449703E0,(19[&rate=7.650707262133881E-4]:1.273699869083E1,18[&rate=0.0012105851690240635]:1.273699869083E1)[&rate=4.770249485044845E-4]:5.915382771698E1)[&rate=3.4206191354322257E-4]:3.398579637754E0,((10[&rate=8.246342526899382E-4]:1.977345183244E1,31[&rate=8.971337723704443E-4]:1.977345183244E1)[&rate=5.571245852143261E-4]:5.370015632853E1,23[&rate=3.4206191354322257E-4]:7.347360816097E1)[&rate=6.840816288693066E-4]:1.81579788459E0)[&rate=4.987767399429767E-4]:1.603451294238E0,((12[&rate=7.331681994384833E-4]:7.499847439311E1,((16[&rate=4.531144001203039E-4]:3.020043852391E1,((22[&rate=8.971337723704443E-4]:2.076149905965E0,21[&rate=8.246342526899382E-4]:2.076149905965E0)[&rate=9.512637010068684E-4]:5.645616854511E0,20[&rate=4.987767399429767E-4]:7.721766760476E0)[&rate=0.0012810625076170876]:2.247867176344E1)[&rate=4.770249485044845E-4]:4.348388622681E1,(((((4[&rate=7.877670453876485E-4]:1.656853159756E0,2[&rate=8.811839713007434E-4]:1.656853159756E0)[&rate=5.384439833987434E-4]:8.466007322695E-1,3[&rate=8.119131396873995E-4]:2.503453892026E0)[&rate=0.0010194802074486018]:1.220289372667E1,5[&rate=4.0994026115434E-4]:1.47063476187E1)[&rate=4.6540207857661333E-4]:2.661259554805E0,(1[&rate=4.987767399429767E-4]:1.204639149737E1,(6[&rate=9.720389841955517E-4]:9.640213110594E0,7[&rate=5.190982088454859E-4]:9.640213110594E0)[&rate=6.02295069833516E-4]:2.406178386774E0)[&rate=9.320047976716845E-4]:5.321215676133E0)[&rate=7.650707262133881E-4]:5.528566329665E1,((30[&rate=7.130250124483001E-4]:5.563579333722E1,26[&rate=5.753680568889684E-4]:5.563579333722E1)[&rate=8.660522372020216E-4]:9.973289110392E0,32[&rate=3.4206191354322257E-4]:6.560908244761E1)[&rate=6.74702108215824E-4]:7.044188022539E0)[&rate=8.516375335182313E-4]:1.031054280572E0)[&rate=5.478517198306347E-4]:1.314149642383E0)[&rate=6.65429962947757E-4]:1.151827941771E0,25[&rate=6.291184222040986E-4]:7.615030233488E1)[&rate=5.662889199190407E-4]:7.425550049205E-1)[&rate=9.320047976716845E-4]:3.036139094536E0,(17[&rate=6.65429962947757E-4]:6.633629727939E1,(27[&rate=7.650707262133881E-4]:2.739042686163E1,28[&rate=9.512637010068684E-4]:2.739042686163E1)[&rate=6.74702108215824E-4]:3.894587041776E1)[&rate=7.541794849243332E-4]:1.359269915494E1)[&rate=0.0010194802074486018]:4.65608334097E1);\ntree STATE_46 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55163.3935945383,EEF_ucld_branchRates=-266.168517335019,lnP=-55163.3935945383,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.5292014258110024E-4]:7.130621327583E0,9[&rate=5.398310647903867E-4]:7.130621327583E0)[&rate=3.851810934633781E-4]:6.893552370316E0,15[&rate=8.983637816324361E-4]:1.40241736979E1)[&rate=9.808262641340737E-4]:8.762432034037E1,(14[&rate=0.0010235593430365133]:4.207662040389E1,24[&rate=0.0013483044502161205]:4.207662040389E1)[&rate=9.282688252355821E-4]:5.957187363438E1)[&rate=8.587271569987223E-4]:1.816797971758E1,((((((11[&rate=7.916515747379436E-4]:2.172928251256E1,29[&rate=5.073876624633162E-4]:2.172928251256E1)[&rate=8.46590163237665E-4]:4.423816299637E1,(33[&rate=6.134507640268771E-4]:5.925791647362E1,13[&rate=7.251158238847533E-4]:5.925791647362E1)[&rate=6.220455464741775E-4]:6.709529035314E0)[&rate=6.987168982446417E-4]:1.749255299989E0,(19[&rate=9.445946506250665E-4]:1.141088412532E1,18[&rate=7.525768337650957E-4]:1.141088412532E1)[&rate=6.644947301137631E-4]:5.630581668361E1)[&rate=6.81511936042071E-4]:3.220727555077E0,((10[&rate=0.001193687248974803]:2.079693916843E1,31[&rate=9.282688252355821E-4]:2.079693916843E1)[&rate=6.390818124182727E-4]:4.924978873534E1,23[&rate=5.498034337926013E-4]:7.004672790377E1)[&rate=8.126367741410239E-4]:8.907004602334E-1)[&rate=5.871281474405948E-4]:2.50776107453E0,((12[&rate=7.620429738500196E-4]:6.959242779252E1,((((((4[&rate=8.126367741410239E-4]:2.085455664494E0,2[&rate=7.916515747379436E-4]:2.085455664494E0)[&rate=3.3634406799986076E-4]:8.399325698624E-1,3[&rate=5.871281474405948E-4]:2.925388234356E0)[&rate=6.475565056749473E-4]:9.03523675492E0,5[&rate=6.047804337187823E-4]:1.196062498928E1)[&rate=5.688903147893429E-4]:2.276765125325E0,(1[&rate=8.983637816324361E-4]:9.628405858725E0,(6[&rate=7.916515747379436E-4]:7.843382518316E0,7[&rate=5.073876624633162E-4]:7.843382518316E0)[&rate=7.251158238847533E-4]:1.785023340409E0)[&rate=8.845451963420485E-4]:4.608984255875E0)[&rate=4.8250870056834334E-4]:5.232035074262E1,((30[&rate=8.845451963420485E-4]:4.785737870199E1,26[&rate=6.390818124182727E-4]:4.785737870199E1)[&rate=9.282688252355821E-4]:7.742328068296E0,32[&rate=5.871281474405948E-4]:5.559970677028E1)[&rate=4.1358919677052914E-4]:1.095803408694E1)[&rate=8.46590163237665E-4]:1.076926893791E0,(16[&rate=5.187131058016917E-4]:2.736880309325E1,((22[&rate=0.001048365368438611]:2.726489911129E0,21[&rate=7.71696458904038E-4]:2.726489911129E0)[&rate=5.29493755873561E-4]:5.306784973402E0,20[&rate=5.871281474405948E-4]:8.033274884532E0)[&rate=0.0015440777223875378]:1.933552820872E1)[&rate=9.282688252355821E-4]:4.026586465776E1)[&rate=8.348928553535478E-4]:1.95776004151E0)[&rate=8.46590163237665E-4]:5.051758831679E-1,25[&rate=7.074236852227159E-4]:7.009760367569E1)[&rate=7.162185203371399E-4]:3.347585762839E0)[&rate=4.1358919677052914E-4]:4.497399052369E0,(17[&rate=6.900842002504263E-4]:6.848160962452E1,(27[&rate=5.29493755873561E-4]:2.734115266298E1,28[&rate=0.001048365368438611]:2.734115266298E1)[&rate=8.126367741410239E-4]:4.114045696153E1)[&rate=8.020016444966069E-4]:9.460978866385E0)[&rate=0.0015440777223875378]:4.187388526495E1);\ntree STATE_47 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55133.600694501525,EEF_ucld_branchRates=-266.168517335019,lnP=-55133.600694501525,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=4.297317294209122E-4]:6.696908609474E0,9[&rate=6.13229223596863E-4]:6.696908609474E0)[&rate=3.4865904347525613E-4]:9.524894421299E0,15[&rate=3.110242343898536E-4]:1.622180303077E1)[&rate=6.473323724414366E-4]:9.510850828169E1,(14[&rate=0.0012766318523924382]:4.71097709767E1,24[&rate=8.282020964548449E-4]:4.71097709767E1)[&rate=9.858626085533263E-4]:6.422054033576E1)[&rate=6.13229223596863E-4]:6.217004436443E0,(((((((4[&rate=9.526233140142844E-4]:1.903070674221E0,2[&rate=5.612233167458301E-4]:1.903070674221E0)[&rate=5.612233167458301E-4]:1.052656958193E0,3[&rate=4.760055041376315E-4]:2.955727632414E0)[&rate=7.258457943464438E-4]:8.948028195741E0,5[&rate=3.244348253300856E-4]:1.190375582815E1)[&rate=3.810263305912398E-4]:2.527225365696E0,(1[&rate=2.797414720436004E-4]:9.404203999474E0,(6[&rate=3.4865904347525613E-4]:8.770327448283E0,7[&rate=5.712434676241928E-4]:8.770327448283E0)[&rate=6.024066172647704E-4]:6.338765511914E-1)[&rate=5.037478006676626E-4]:5.026777194377E0)[&rate=6.845152007474311E-4]:5.798416628372E1,((12[&rate=8.282020964548449E-4]:6.721164831747E1,(16[&rate=7.258457943464438E-4]:3.102261719076E1,((22[&rate=7.902547585901267E-4]:2.807853150029E0,21[&rate=2.3495948405539735E-4]:2.807853150029E0)[&rate=7.258457943464438E-4]:5.276954592525E0,20[&rate=7.902547585901267E-4]:8.084807742554E0)[&rate=0.0017165777367884637]:2.293780944821E1)[&rate=6.977665816242626E-4]:3.618903112671E1)[&rate=7.407960993152723E-4]:3.858806262331E0,((30[&rate=6.845152007474311E-4]:5.052149642274E1,26[&rate=4.1074184225312624E-4]:5.052149642274E1)[&rate=6.356652571668981E-4]:1.313560180522E1,32[&rate=2.3495948405539735E-4]:6.365709822796E1)[&rate=6.473323724414366E-4]:7.41335635184E0)[&rate=4.575913176648086E-4]:1.34469289777E0)[&rate=2.6016954914136686E-4]:2.985562719683E0,(25[&rate=7.407960993152723E-4]:7.454948757866E1,((((33[&rate=7.902547585901267E-4]:5.739504782319E1,13[&rate=3.4865904347525613E-4]:5.739504782319E1)[&rate=4.202957715167862E-4]:1.296283071257E1,(11[&rate=4.944625665496633E-4]:1.71442280954E1,29[&rate=4.575913176648086E-4]:1.71442280954E1)[&rate=5.416257423419832E-4]:5.321365044036E1)[&rate=4.1074184225312624E-4]:7.597966803079E-1,(19[&rate=8.491435965940325E-4]:1.153068591923E1,18[&rate=7.902547585901267E-4]:1.153068591923E1)[&rate=4.202957715167862E-4]:5.958698929684E1)[&rate=5.814346286318608E-4]:1.915907746852E0,((10[&rate=4.010382669618826E-4]:2.220676028084E1,31[&rate=6.593393222089163E-4]:2.220676028084E1)[&rate=3.810263305912398E-4]:5.033960885297E1,23[&rate=4.390772099068804E-4]:7.254636913381E1)[&rate=6.593393222089163E-4]:4.872138291033E-1)[&rate=0.0011873131682265602]:1.515904615739E0)[&rate=8.086362266734E-4]:8.512226185964E-1)[&rate=8.282020964548449E-4]:4.496828142512E0,(17[&rate=8.491435965940325E-4]:6.823938679106E1,(27[&rate=4.852203911524246E-4]:2.548502793971E1,28[&rate=0.0010678934202925385]:2.548502793971E1)[&rate=5.320151502616179E-4]:4.275435885134E1)[&rate=4.1074184225312624E-4]:1.165815154871E1)[&rate=0.0017165777367884637]:3.764977740914E1);\ntree STATE_48 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55149.05309882678,EEF_ucld_branchRates=-266.168517335019,lnP=-55149.05309882678,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.036856012933165E-4]:8.047622462807E0,9[&rate=7.274724279311377E-4]:8.047622462807E0)[&rate=3.7510030485838757E-4]:7.206445773086E0,15[&rate=3.461185576535476E-4]:1.525406823589E1)[&rate=8.263454258946099E-4]:9.681637875805E1,(14[&rate=0.001384288181343608]:5.325579813316E1,24[&rate=6.393674170843887E-4]:5.325579813316E1)[&rate=8.43375440023308E-4]:5.881464886078E1)[&rate=6.294078235284257E-4]:1.138556029405E1,(((((((11[&rate=6.704141562730126E-4]:1.747858804207E1,29[&rate=4.527084599049553E-4]:1.747858804207E1)[&rate=7.949100218371862E-4]:5.051371236513E1,(33[&rate=8.43375440023308E-4]:6.022354781552E1,13[&rate=6.196108332609429E-4]:6.022354781552E1)[&rate=3.083853664798067E-4]:7.76875259168E0)[&rate=0.0010793651134835384]:2.755089773435E0,(19[&rate=9.753464580252881E-4]:1.13574166349E1,18[&rate=5.270442686019902E-4]:1.13574166349E1)[&rate=4.4278963098648444E-4]:5.938997354573E1)[&rate=4.719429596590307E-4]:1.506133633603E0,((10[&rate=4.624131643987955E-4]:2.176016501524E1,31[&rate=7.66310810286895E-4]:2.176016501524E1)[&rate=5.089160961351947E-4]:4.96231479406E1,23[&rate=6.923052126733147E-4]:7.138331295584E1)[&rate=9.238997945944608E-4]:8.702108584006E-1)[&rate=5.179933556066841E-4]:2.596309983257E0,25[&rate=6.704141562730126E-4]:7.484983379749E1)[&rate=6.704141562730126E-4]:1.354016901687E0,((((((4[&rate=8.807521195303425E-4]:1.713959457185E0,2[&rate=7.153964039272457E-4]:1.713959457185E0)[&rate=4.997938623898211E-4]:6.11888131647E-1,3[&rate=5.451354016549759E-4]:2.325847588832E0)[&rate=7.802975093224094E-4]:1.033076655791E1,5[&rate=4.221106101323324E-4]:1.265661414674E1)[&rate=8.807521195303425E-4]:1.489706598586E0,(1[&rate=2.8172450740630985E-4]:8.93520912582E0,(6[&rate=8.614548667353845E-4]:8.241306195753E0,7[&rate=3.461185576535476E-4]:8.241306195753E0)[&rate=0.0010054800123234953]:6.939029300674E-1)[&rate=5.54207596802661E-4]:5.211111619505E0)[&rate=7.66310810286895E-4]:5.827324940911E1,(((30[&rate=6.923052126733147E-4]:4.839495889385E1,26[&rate=7.036856012933165E-4]:4.839495889385E1)[&rate=8.263454258946099E-4]:1.224710042492E1,32[&rate=3.878624151823843E-4]:6.064205931878E1)[&rate=4.997938623898211E-4]:1.035854103192E1,(16[&rate=3.998455141642531E-4]:3.071393986184E1,((22[&rate=7.802975093224094E-4]:2.805347582305E0,21[&rate=4.527084599049553E-4]:2.805347582305E0)[&rate=5.817119199353388E-4]:3.533728830489E0,20[&rate=4.8133111610875547E-4]:6.339076412794E0)[&rate=0.0016445428389015987]:2.437486344905E1)[&rate=6.099589931808033E-4]:4.028666048886E1)[&rate=9.238997945944608E-4]:1.418969803731E0)[&rate=2.8172450740630985E-4]:1.235834245285E0,12[&rate=6.004357197927499E-4]:7.365540439972E1)[&rate=3.998455141642531E-4]:2.548446299465E0)[&rate=6.704141562730126E-4]:2.709154082965E0,(17[&rate=5.910251415819451E-4]:6.951835005877E1,(27[&rate=4.624131643987955E-4]:2.054067739991E1,28[&rate=0.001126746594118679]:2.054067739991E1)[&rate=7.802975093224094E-4]:4.897767265886E1)[&rate=4.719429596590307E-4]:9.394654723377E0)[&rate=0.0016445428389015987]:4.454300250585E1);\ntree STATE_49 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55171.10859955921,EEF_ucld_branchRates=-266.168517335019,lnP=-55171.10859955921,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=7.029834648675939E-4]:7.905655787429E0,9[&rate=6.830034347410179E-4]:7.905655787429E0)[&rate=4.894024652467166E-4]:5.333153541292E0,15[&rate=7.700617141881774E-4]:1.323880932872E1)[&rate=4.98443806859593E-4]:1.148333612364E2,(14[&rate=0.001047178509430801]:5.240629374215E1,24[&rate=9.107716371658064E-4]:5.240629374215E1)[&rate=5.160967473291032E-4]:7.566587682296E1)[&rate=6.830034347410179E-4]:1.466708868384E0,((((12[&rate=8.392093211686843E-4]:7.208315250956E1,((16[&rate=3.7737471027482066E-4]:3.179710908811E1,((22[&rate=8.095502272361342E-4]:2.682901470203E0,21[&rate=3.9220735236556917E-4]:2.682901470203E0)[&rate=5.160967473291032E-4]:4.179640512749E0,20[&rate=7.133446570940516E-4]:6.862541982952E0)[&rate=0.0015280166764625157]:2.493456710515E1)[&rate=5.842400727239504E-4]:3.867717998625E1,(((((4[&rate=8.239867864456607E-4]:1.558016477962E0,3[&rate=7.579412723624248E-4]:1.558016477962E0)[&rate=7.029834648675939E-4]:3.879476835955E-1,2[&rate=6.453943547296622E-4]:1.945964161558E0)[&rate=6.638598917456294E-4]:7.706287495968E0,5[&rate=5.247613874691316E-4]:9.652251657526E0)[&rate=6.638598917456294E-4]:2.522055880065E0,(1[&rate=4.98443806859593E-4]:7.856398140655E0,(6[&rate=8.239867864456607E-4]:7.047980200952E0,7[&rate=6.274696496580309E-4]:7.047980200952E0)[&rate=4.801755006822578E-4]:8.084179397025E-1)[&rate=4.894024652467166E-4]:4.317909396936E0)[&rate=4.801755006822578E-4]:5.614864538838E1,((30[&rate=8.909118224003037E-4]:4.561295276316E1,26[&rate=5.418772213813261E-4]:4.561295276316E1)[&rate=6.099631318655953E-4]:1.583218037892E1,32[&rate=7.958025559422418E-4]:6.144513314209E1)[&rate=6.099631318655953E-4]:6.877819783885E0)[&rate=6.013309593292333E-4]:2.151336148378E0)[&rate=7.700617141881774E-4]:1.608863435207E0)[&rate=4.98443806859593E-4]:1.973775145427E0,25[&rate=7.349460570053993E-4]:7.405692765499E1)[&rate=3.1372423703276444E-4]:1.412619337305E0,(((19[&rate=5.073324629160769E-4]:1.281026057876E1,18[&rate=8.392093211686843E-4]:1.281026057876E1)[&rate=3.4024115481442064E-4]:5.756192304526E1,((33[&rate=7.133446570940516E-4]:6.353617458716E1,13[&rate=4.404943325623336E-4]:6.353617458716E1)[&rate=7.133446570940516E-4]:5.175737992168E0,(11[&rate=6.830034347410179E-4]:1.56527749122E1,29[&rate=4.6100085363266996E-4]:1.56527749122E1)[&rate=5.503661216561566E-4]:5.305913766712E1)[&rate=3.1372423703276444E-4]:1.66027104469E0)[&rate=0.0010883376640127263]:1.735517316768E0,((10[&rate=8.392093211686843E-4]:2.231393602638E1,31[&rate=8.553354139359847E-4]:2.231393602638E1)[&rate=3.4024115481442064E-4]:4.926372679982E1,23[&rate=4.295446499087731E-4]:7.15776628262E1)[&rate=4.056122600478204E-4]:5.300381145819E-1)[&rate=5.672893661131775E-4]:3.361846051509E0)[&rate=9.826218193015558E-4]:3.978638611129E0,(17[&rate=9.107716371658064E-4]:7.202688853209E1,(27[&rate=6.733375989165151E-4]:1.970942630571E1,28[&rate=0.0011393881823691721]:1.970942630571E1)[&rate=7.029834648675939E-4]:5.231746222638E1)[&rate=9.826218193015558E-4]:7.421297071327E0)[&rate=0.0015280166764625157]:5.009069383007E1);\ntree STATE_50 [&HMG_ucld_branchRates=-266.168517335019,TGFb2_ucld_branchRates=-266.168517335019,mtDNA_linked_ucld_branchRates=-266.168517335019,GAPDH_ucld_branchRates=-266.168517335019,posterior=-55134.90850656344,EEF_ucld_branchRates=-266.168517335019,lnP=-55134.90850656344,RHOD_ucld_branchRates=-266.168517335019] = [&R] ((((8[&rate=5.803197525194792E-4]:7.670870139057E0,9[&rate=7.225436496226685E-4]:7.670870139057E0)[&rate=0.0010434913940446146]:5.478477828768E0,15[&rate=4.829879279472217E-4]:1.314934796783E1)[&rate=7.692137150934966E-4]:9.803945529613E1,(14[&rate=9.51540214662105E-4]:4.898917536697E1,24[&rate=8.587800724997733E-4]:4.898917536697E1)[&rate=0.0010165694538464165]:6.219962789698E1)[&rate=7.692137150934966E-4]:1.457589729998E1,(((((((16[&rate=4.705269031732208E-4]:2.774064334456E1,((22[&rate=7.050145087358959E-4]:1.817443728987E0,21[&rate=7.79196700607247E-4]:1.817443728987E0)[&rate=7.40649943286784E-4]:3.579559795952E0,20[&rate=9.711709714378167E-4]:5.397003524939E0)[&rate=0.001216010265835883]:2.234363981963E1)[&rate=0.0013050175282145714]:4.061507782896E1,12[&rate=8.861076594136634E-4]:6.835572117352E1)[&rate=8.338939846309957E-4]:2.722238846159E0,((30[&rate=8.861076594136634E-4]:5.256812213146E1,26[&rate=8.221932251845324E-4]:5.256812213146E1)[&rate=7.499636492089143E-4]:1.17880019859E1,32[&rate=4.946068869755539E-4]:6.435612411736E1)[&rate=5.540983298266575E-4]:6.721835902317E0)[&rate=4.0377189890762437E-4]:2.151275468481E0,((((4[&rate=5.449921830210305E-4]:1.839615974367E0,3[&rate=5.449921830210305E-4]:1.839615974367E0)[&rate=6.219374233425796E-4]:3.828148072719E-1,2[&rate=5.803197525194792E-4]:2.222430781639E0)[&rate=5.449921830210305E-4]:7.83989340964E0,5[&rate=5.62999757278043E-4]:1.006232419128E1)[&rate=8.221932251845324E-4]:3.156253650843E0,(1[&rate=3.762330876884519E-4]:1.021712266504E1,(6[&rate=6.879365981673345E-4]:9.238221259391E0,7[&rate=5.717305161710644E-4]:9.238221259391E0)[&rate=7.40649943286784E-4]:9.789014056505E-1)[&rate=7.692137150934966E-4]:3.00145517708E0)[&rate=7.692137150934966E-4]:6.001065764604E1)[&rate=3.762330876884519E-4]:1.783492006334E0,25[&rate=8.587800724997733E-4]:7.50127274945E1)[&rate=6.219374233425796E-4]:9.319574946797E-1,(((19[&rate=8.861076594136634E-4]:1.291473496051E1,18[&rate=0.0011111486997196938]:1.291473496051E1)[&rate=4.569594466623367E-4]:5.624169919146E1,((11[&rate=6.54686096646994E-4]:1.762161214085E1,29[&rate=8.460693815712207E-4]:1.762161214085E1)[&rate=7.225436496226685E-4]:5.021712536242E1,(33[&rate=7.315161536544858E-4]:6.3476950061E1,13[&rate=3.762330876884519E-4]:6.3476950061E1)[&rate=6.629188033807829E-4]:4.361787442272E0)[&rate=7.692137150934966E-4]:1.317696648697E0)[&rate=5.540983298266575E-4]:3.617847096466E0,((10[&rate=5.803197525194792E-4]:2.111026288911E1,31[&rate=8.338939846309957E-4]:2.111026288911E1)[&rate=4.705269031732208E-4]:5.051481645551E1,23[&rate=6.54686096646994E-4]:7.162507934462E1)[&rate=5.356408773676935E-4]:1.149201903813E0)[&rate=7.692137150934966E-4]:3.170403740744E0)[&rate=6.054773409114629E-4]:6.905940729011E0,(17[&rate=9.009134248605781E-4]:7.744448815072E1,(27[&rate=0.0010165694538464165]:2.181584424899E1,28[&rate=9.334504852317562E-4]:2.181584424899E1)[&rate=5.62999757278043E-4]:5.562864390173E1)[&rate=6.795309520526933E-4]:5.40613756747E0)[&rate=0.0014930302801874373]:4.291407484575E1);\nEnd;\n' + if not check_individual_results(cm, t): + res = False + print("count parameters ", end = '') + cm = "./pxlog -p TEST/run1.p TEST/run2.p -i" + t = 'TEST/run1.p: 501 samples of 15 variables.\nTEST/run2.p: 501 samples of 15 variables.\nCounted 1002 total samples of 15 variables across 2 files.\n' + if not check_individual_results(cm, t): + res = False + print("parameter log ", end = '') + cm = "./pxlog -p TEST/run1.p TEST/run2.p -b 400 -n 10" + t = 'Gen LnL LnPr TL{all} r(A<->C){all} r(A<->G){all} r(A<->T){all} r(C<->G){all} r(C<->T){all} r(G<->T){all} pi(A){all} pi(C){all} pi(G){all} pi(T){all} alpha{all} pinvar{all}\n0 -2.562690e+04 -4.244089e+01 9.859853e+00 1.321215e-02 5.540706e-01 3.046823e-02 1.721216e-02 3.155399e-01 6.949704e-02 3.455151e-01 4.455032e-01 5.672251e-02 1.522591e-01 7.003904e-01 4.134683e-01\n1 -2.564363e+04 -3.385540e+01 8.861788e+00 1.597314e-02 5.405184e-01 3.572953e-02 1.538118e-02 3.098454e-01 8.255241e-02 3.383438e-01 4.445997e-01 6.011694e-02 1.569396e-01 7.525231e-01 4.174325e-01\n2 -2.564411e+04 -3.448828e+01 8.944435e+00 1.458647e-02 5.459096e-01 2.872731e-02 1.085169e-02 3.024874e-01 9.743752e-02 3.548307e-01 4.371532e-01 6.174098e-02 1.462752e-01 6.344983e-01 3.924460e-01\n3 -2.561863e+04 -3.780175e+01 9.315375e+00 1.358819e-02 5.484503e-01 2.921262e-02 1.526999e-02 3.124167e-01 8.106220e-02 3.516604e-01 4.366560e-01 6.137797e-02 1.503057e-01 6.601072e-01 3.928130e-01\n4 -2.562636e+04 -4.286557e+01 9.919687e+00 1.340228e-02 5.178548e-01 2.913669e-02 1.709175e-02 3.439590e-01 7.855543e-02 3.483430e-01 4.371204e-01 6.342031e-02 1.511163e-01 6.350827e-01 3.915076e-01\n5 -2.563020e+04 -2.769145e+01 8.224110e+00 1.577641e-02 5.576311e-01 3.089381e-02 9.919816e-03 3.176634e-01 6.811549e-02 3.528687e-01 4.393390e-01 6.275730e-02 1.450349e-01 6.266213e-01 4.008911e-01\n6 -2.561552e+04 -3.923375e+01 9.477967e+00 1.276876e-02 5.317353e-01 3.275137e-02 1.339039e-02 3.257596e-01 8.359464e-02 3.600337e-01 4.377344e-01 5.838327e-02 1.438486e-01 6.915539e-01 4.030057e-01\n7 -2.563452e+04 -3.925328e+01 9.485339e+00 1.164464e-02 5.139898e-01 3.236776e-02 1.466640e-02 3.338788e-01 9.345258e-02 3.563713e-01 4.399185e-01 5.766919e-02 1.460411e-01 6.481577e-01 4.187259e-01\n8 -2.562525e+04 -4.076892e+01 9.663887e+00 1.397800e-02 5.807593e-01 2.663268e-02 9.194246e-03 2.936051e-01 7.583059e-02 3.393248e-01 4.499280e-01 5.928337e-02 1.514639e-01 6.540484e-01 4.143338e-01\n9 -2.562177e+04 -3.821525e+01 9.362094e+00 1.134616e-02 5.635330e-01 3.136786e-02 1.478972e-02 2.936829e-01 8.528038e-02 3.391811e-01 4.535238e-01 6.084279e-02 1.464523e-01 6.687203e-01 4.171037e-01\n10 -2.563252e+04 -4.060590e+01 9.644269e+00 1.503387e-02 5.605209e-01 2.763069e-02 1.204396e-02 3.098828e-01 7.488771e-02 3.392548e-01 4.471247e-01 6.110044e-02 1.525201e-01 6.555609e-01 4.037897e-01\n11 -2.562664e+04 -4.213536e+01 9.833713e+00 1.232860e-02 5.395414e-01 3.024907e-02 1.121710e-02 3.268673e-01 7.979654e-02 3.408891e-01 4.480571e-01 5.879649e-02 1.522573e-01 6.098504e-01 4.188516e-01\n12 -2.563167e+04 -4.184690e+01 9.798107e+00 1.216011e-02 5.281554e-01 3.369355e-02 1.651959e-02 3.336440e-01 7.582734e-02 3.556323e-01 4.386915e-01 6.082072e-02 1.448555e-01 6.151424e-01 4.019154e-01\n13 -2.562311e+04 -3.511591e+01 9.011525e+00 1.420429e-02 5.225837e-01 3.129710e-02 1.897640e-02 3.393098e-01 7.362878e-02 3.610598e-01 4.292158e-01 6.198637e-02 1.477380e-01 6.576091e-01 4.184340e-01\n14 -2.562354e+04 -3.439340e+01 8.932346e+00 1.674036e-02 5.381113e-01 3.123254e-02 1.201223e-02 3.389401e-01 6.296347e-02 3.512489e-01 4.361070e-01 6.418764e-02 1.484565e-01 6.490354e-01 4.195533e-01\n15 -2.561774e+04 -4.104333e+01 9.693244e+00 1.356055e-02 5.555160e-01 3.013395e-02 1.497729e-02 3.087895e-01 7.702271e-02 3.417365e-01 4.459690e-01 6.307091e-02 1.492236e-01 6.828677e-01 4.044682e-01\n16 -2.561578e+04 -3.137908e+01 8.605127e+00 1.498821e-02 5.891174e-01 2.757067e-02 1.534648e-02 2.696136e-01 8.336370e-02 3.353194e-01 4.536863e-01 5.748396e-02 1.535103e-01 6.531047e-01 3.941014e-01\n17 -2.562464e+04 -3.780516e+01 9.306694e+00 1.253358e-02 5.801869e-01 2.503249e-02 1.866501e-02 2.952402e-01 6.834180e-02 3.418183e-01 4.492637e-01 5.784761e-02 1.510704e-01 7.389666e-01 4.123348e-01\n18 -2.562077e+04 -3.148056e+01 8.613531e+00 1.481873e-02 5.562068e-01 3.218332e-02 1.196085e-02 3.135224e-01 7.130797e-02 3.564275e-01 4.384962e-01 6.157918e-02 1.434971e-01 6.756563e-01 4.081317e-01\n19 -2.563194e+04 -3.882985e+01 9.430944e+00 1.473732e-02 5.618451e-01 3.124917e-02 1.722694e-02 3.139665e-01 6.097494e-02 3.486954e-01 4.429923e-01 5.866827e-02 1.496441e-01 6.902596e-01 4.020177e-01\n20 -2.562446e+04 -3.593565e+01 9.100935e+00 1.372513e-02 5.302188e-01 3.147862e-02 1.543002e-02 3.287349e-01 8.041257e-02 3.494219e-01 4.383438e-01 5.861659e-02 1.536177e-01 6.785744e-01 4.075729e-01\n21 -2.561437e+04 -3.343121e+01 8.819019e+00 1.364716e-02 5.058547e-01 3.713427e-02 1.752883e-02 3.592584e-01 6.657668e-02 3.573228e-01 4.355069e-01 6.246680e-02 1.447035e-01 7.196523e-01 4.225202e-01\n' + if not check_individual_results(cm, t): + res = False + print_success(res) + return res + elif name == "pxlssq": + res = True + print("default ", end = '') + cm = "./pxlssq -s TEST/test.fa" + t = 'File type: fasta\nNumber of sequences: 5\nIs aligned: true\nSequence length: 20\n--------- Nucl TABLE ----------\nNucl Total Proportion\n A 20 0.2\n C 37 0.37\n G 18 0.18\n T 25 0.25\n - 0 0\n ? 0 0\n G+C 55 0.55\n--------- Nucl TABLE ----------\n' + if not check_individual_results(cm, t): + res = False + print("labels ", end = '') + cm = "./pxlssq -s TEST/test.fa -l" + t = 'TaxonA\nTaxonB\nTaxonC\nTaxonD\nTaxonE\n' + if not check_individual_results(cm, t): + res = False + print("frequencies ", end = '') + cm = "./pxlssq -s TEST/test.fa -f" + # expected results exclude leading spaces as these are apparently by p.communicate() + t = 'A C G T - ?\n 20 37 18 25 0 0\n 0.200000 0.370000 0.180000 0.250000 0.000000 0.000000\n' + if not check_individual_results(cm, t): + res = False + print("indidivual stats ", end = '') + cm = "./pxlssq -s TEST/test.fa -i" + # same here + t = 'A C G T - ? Nchar\nTaxonA 0.25 0.3 0.05 0.4 0 0 20\nTaxonB 0.2 0.4 0.35 0.05 0 0 20\nTaxonC 0.35 0.35 0.1 0.2 0 0 20\nTaxonD 0.1 0.3 0.25 0.35 0 0 20\nTaxonE 0.1 0.5 0.15 0.25 0 0 20\n' + if not check_individual_results(cm, t): + res = False + print("binary data ", end = '') + cm = "./pxlssq -s TEST/Binary_5tax.fa" + t = 'File type: fasta\nNumber of sequences: 5\nIs aligned: true\nSequence length: 250\n--------- Binary TABLE ----------\nBinary Total Proportion\n 0 622 0.4976\n 1 628 0.5024\n - 0 0\n ? 0 0\n--------- Binary TABLE ----------\n' + if not check_individual_results(cm, t): + res = False + print("morph data ", end = '') + cm = "./pxlssq -s TEST/morph_data/morph.phy" + t = 'File type: phylip\nNumber of sequences: 64\nIs aligned: true\nSequence length: 437\n--------- Multi TABLE ----------\nMulti Total Proportion\n 0 12369 0.442255\n 1 3471 0.124106\n 2 697 0.0249213\n 3 61 0.00218106\n 4 8 0.000286041\n 5 4 0.000143021\n 6 5 0.000178776\n - 0 0\n ? 11353 0.405928\n--------- Multi TABLE ----------\n' + if not check_individual_results(cm, t): + res = False + print("fastq ", end = '') + cm = "./pxlssq -s TEST/test.fastq" + t = 'File type: fastq\nNumber of sequences: 1000\nIs aligned: true\nSequence length: 101\n--------- Nucl TABLE ----------\nNucl Total Proportion\n A 27855 0.275792\n C 24983 0.247356\n G 21584 0.213703\n T 26351 0.260901\n - 0 0\n ? 227 0.00224752\n G+C 46567 0.461059\n--------- Nucl TABLE ----------\n' + if not check_individual_results(cm, t): + res = False + print("unaliagned ", end = '') + cm = "./pxlssq -s TEST/unaligned.fa -a" + t = 'false\n' + if not check_individual_results(cm, t): + res = False + print("individual missing ", end = '') + cm = "./pxlssq -s TEST/morph_data/morph.phy -m -i" + t = 'Nchar Missing Proportion\nErythrosuchus 437 65 0.148741\nEuparkeria 437 32 0.0732265\nPROTEROCHAMPSIDAE 437 57 0.130435\nScleromochlus 437 140 0.320366\nEudimorphodon 437 129 0.295195\nPeteinosaurus 437 271 0.620137\nPreondactylus 437 212 0.485126\nAustriadactylus 437 268 0.613272\nLagerpeton 437 296 0.677346\nDromomeron 437 367 0.839817\nMarasuchus 437 220 0.503432\nPseudolagosuchus 437 359 0.82151\nSilesaurus 437 123 0.281465\nSacisaurus 437 294 0.672769\nEucoelophysis 437 379 0.867277\nLewisuchus 437 282 0.645309\nEoraptor 437 134 0.306636\nHerrerasaurus 437 22 0.0503432\nCoelophysis 437 26 0.0594966\nLiliensternus 437 207 0.473684\nZupaysaurus 437 246 0.562929\nPlateosaurus 437 10 0.0228833\nPantydraco 437 147 0.336384\nAntetonitrus 437 334 0.764302\nEocursor 437 305 0.697941\nHeterodontosaurus 437 74 0.169336\nPisanosaurus 437 339 0.775744\nPaleorhinus 437 32 0.0732265\nRutiodon 437 82 0.187643\nMystriosuchus 437 93 0.212815\nPseudopalatus 437 122 0.279176\nAetosaurus 437 106 0.242563\nStagonolepis 437 24 0.0549199\nDesmatosuchus 437 46 0.105263\nLongosuchus 437 103 0.235698\nOrnithosuchus 437 67 0.153318\nRiojasuchus 437 76 0.173913\nDromicosuchus 437 167 0.382151\nHesperosuchus 437 154 0.352403\nPseudhesperosuchus 437 182 0.416476\nTerrestrisuchus 437 67 0.153318\nErpetosuchus 437 194 0.443936\nGracilisuchus 437 94 0.215103\nQianosuchus 437 173 0.395881\nRevuletosaurus 437 218 0.498856\nArizonasaurus 437 150 0.343249\nArganasuchus 437 346 0.791762\nBatrachotomus 437 83 0.189931\nBromsgroveia 437 392 0.897025\nEffigia 437 60 0.1373\nFasolasuchus 437 265 0.606407\nLotosaurus 437 116 0.265446\nPoposaurus 437 284 0.649886\nPostosuchus 437 37 0.0846682\nPrestosuchus 437 119 0.272311\nRauisuchus 437 239 0.546911\nSaurosuchus 437 110 0.251716\nShuvosaurus 437 66 0.15103\nSillosaurus 437 368 0.842105\nStagonosuchus 437 350 0.800915\nTeratosaurus 437 232 0.530892\nTicinosuchus 437 209 0.478261\nTikisuchus 437 320 0.732265\nYarasuchus 437 269 0.615561\n' + if not check_individual_results(cm, t): + res = False + print_success(res) + return res + elif name == "pxlstr": + res = True + print("newick ", end = '') + cm = "./pxlstr -t TEST/test.tre" + t = 'tree #: 0\nrooted: true\nbinary: true\nnterminal: 5\nninternal: 4\nbranch lengths: true\nrttipvar: 0.004634\ntreelength: 1.595\nultrametric: false\nrootheight: NA\n' + if not check_individual_results(cm, t): + res = False + print("nexus (mulitple) ", end = '') + cm = "./pxlstr -t TEST/ultra_100_nexus.tre" + t = 'tree #: 0\nrooted: true\nbinary: true\nnterminal: 10\nninternal: 9\nbranch lengths: true\nrttipvar: 7.504e-21\ntreelength: 8.67581\nultrametric: true\nrootheight: 1.74148\ntree #: 1\nrooted: true\nbinary: true\nnterminal: 10\nninternal: 9\nbranch lengths: true\nrttipvar: 2.08278\ntreelength: 8.67581\nultrametric: false\nrootheight: NA\n' + if not check_individual_results(cm, t): + res = False + print("figtree ", end = '') + cm = "./pxlstr -t TEST/figtree.tre" + t = 'tree #: 0\nrooted: false\nbinary: false\nnterminal: 78\nninternal: 78\nbranch lengths: true\nrttipvar: NA\ntreelength: 5019.1\nultrametric: false\nrootheight: NA\n' + if not check_individual_results(cm, t): + res = False + print("polytomy ", end = '') + cm = "./pxlstr -t TEST/binary_test.tre -b" + t = 'false\ntrue\n' + if not check_individual_results(cm, t): + res = False + print("internal linebreak ", end = '') + cm = "./pxlstr -t TEST/linebreak.tre" + t = 'tree #: 0\nrooted: true\nbinary: true\nnterminal: 29\nninternal: 28\nbranch lengths: true\nrttipvar: 8.9928e-07\ntreelength: 0.13572\nultrametric: false\nrootheight: NA\n' + if not check_individual_results(cm, t): + res = False + print_success(res) + return res + elif name == "pxmono": + cm = "./pxmono -t TEST/yule_10taxa.trees -n taxon_1,taxon_2,taxon_3,taxon_4" + t = 'true\nfalse\nfalse\nfalse\ntrue\nfalse\ntrue\nfalse\ntrue\nfalse\n' + elif name == "pxmrca": + cm = "./pxmrca -t TEST/mrca_test.tre -m TEST/mrca.txt" + t = 'KIM 50 \nLEE 11 \nTHURSTON 2 \n' + elif name == "pxmrcacut": + cm = "./pxmrcacut -t TEST/mrca_test.tre -m TEST/mrca.txt" + t = '((((s19:8.9192294969999999,s21:8.9192294939999996):19.9522496099999991,(((s28:1.9460922439999999,(s29:1.0875761909999999,(s30:0.892917128,s31:0.892917128):0.1946590628):0.8585160526):8.3971209000000009,s32:10.3432131500000004):11.0954325699999998,((s33:7.2263048049999998,((s34:2.6703496819999999,s35:2.6703496819999999):2.2229339779999999,s36:4.8932836599999998):2.333021145):7.1928712350000001,((s38:0.6421928454,s39:0.6421928454):0.0263742241,s40:0.6685670695):13.75060897):7.0194696820000004):7.4328333889999998):9.4218491340000003,(((s46:12.2010411199999993,s49:12.2010411199999993):6.6047551540000002,(s51:5.4152383840000002,s52:5.4152383840000002):13.3905578900000002):7.9737073949999999,s56:26.7795036700000004):11.5138245799999996):38.8094614199999981,(((((s87:3.6908438889999999,s88:3.6908438889999999):11.4507337099999997,(((s90:4.7201172930000004,(s91:3.9975684220000001,s92:3.9975684220000001):0.722548871):1.5459479199999999,(s93:2.1981845510000002,s94:2.1981845510000002):4.0678806630000004):0.4042469457,s95:6.6703121569999997):8.4712654399999998):12.3930690600000002,((s98:5.0744154459999997,s100:5.0744154459999997):14.9727031700000008,s104:20.0471186199999991):7.4875280369999997):20.7336537000000014,s126:48.268300349999997):16.5419383899999985,((((s133:19.1945240800000008,(s135:5.4586278740000003,(s136:0.5006869268,s137:0.5006869268):4.9579409449999998):13.7358962099999999):8.3350646560000001,s140:27.5295887400000012):2.2861742469999999,((s151:16.8626535299999993,((s153:3.9294314930000001,s154:3.9294314930000001):0.5895208589000001,(s155:4.4774633660000003,(s156:2.7123332000000002,s157:2.7123332000000002):1.7651301660000001):0.04148898642):12.3437011699999992):11.4377336100000004,s162:28.3003871400000016):1.515375849):2.6277221590000002,((s169:7.8409351410000001,s170:7.8409351410000001):7.5946375750000001,(s172:13.3298600599999997,(s173:6.7214149780000003,((s174:0.3080707103,s175:0.3080707103):4.1074336630000001,s177:4.4155043730000001):2.3059106030000001):6.6084450869999998):2.1057126570000002):17.0079124300000011):32.3667536000000027):12.29255092);\n((((((s283:0.4995078195,s284:0.4995078195):2.3766585789999999,s285:2.8761663990000002):13.2757500999999998,s286:16.1519164900000014):14.5552332300000007,(s288:9.1306009830000008,(s289:5.3395037639999998,s290:5.3395037639999998):3.791097218):21.5765487399999998):2.4713881350000002,((s292:0.1094902985,s293:0.1094902985):21.110084839999999,s296:21.2195751399999999):11.9589627200000006):12.9721000100000001,s307:46.1506378699999971);\n(s19:8.9192294969999999,s21:8.9192294939999996);\n' + elif name == "pxmrcaname": + cm = "./pxmrcaname -t TEST/mrca_test.tre -m TEST/mrca.txt" + t = '(((((s19:8.9192294969999999,s21:8.9192294939999996)THURSTON:19.9522496099999991,(((s28:1.9460922439999999,(s29:1.0875761909999999,(s30:0.892917128,s31:0.892917128):0.1946590628):0.8585160526):8.3971209000000009,s32:10.3432131500000004):11.0954325699999998,((s33:7.2263048049999998,((s34:2.6703496819999999,s35:2.6703496819999999):2.2229339779999999,s36:4.8932836599999998):2.333021145):7.1928712350000001,((s38:0.6421928454,s39:0.6421928454):0.0263742241,s40:0.6685670695):13.75060897):7.0194696820000004):7.4328333889999998):9.4218491340000003,(((s46:12.2010411199999993,s49:12.2010411199999993):6.6047551540000002,(s51:5.4152383840000002,s52:5.4152383840000002):13.3905578900000002):7.9737073949999999,s56:26.7795036700000004):11.5138245799999996):38.8094614199999981,(((((s87:3.6908438889999999,s88:3.6908438889999999):11.4507337099999997,(((s90:4.7201172930000004,(s91:3.9975684220000001,s92:3.9975684220000001):0.722548871):1.5459479199999999,(s93:2.1981845510000002,s94:2.1981845510000002):4.0678806630000004):0.4042469457,s95:6.6703121569999997):8.4712654399999998):12.3930690600000002,((s98:5.0744154459999997,s100:5.0744154459999997):14.9727031700000008,s104:20.0471186199999991):7.4875280369999997):20.7336537000000014,s126:48.268300349999997):16.5419383899999985,((((s133:19.1945240800000008,(s135:5.4586278740000003,(s136:0.5006869268,s137:0.5006869268):4.9579409449999998):13.7358962099999999):8.3350646560000001,s140:27.5295887400000012):2.2861742469999999,((s151:16.8626535299999993,((s153:3.9294314930000001,s154:3.9294314930000001):0.5895208589000001,(s155:4.4774633660000003,(s156:2.7123332000000002,s157:2.7123332000000002):1.7651301660000001):0.04148898642):12.3437011699999992):11.4377336100000004,s162:28.3003871400000016):1.515375849):2.6277221590000002,((s169:7.8409351410000001,s170:7.8409351410000001):7.5946375750000001,(s172:13.3298600599999997,(s173:6.7214149780000003,((s174:0.3080707103,s175:0.3080707103):4.1074336630000001,s177:4.4155043730000001):2.3059106030000001):6.6084450869999998):2.1057126570000002):17.0079124300000011):32.3667536000000027):12.29255092)KIM:22.8972103300000001,((((((((s213:0.2029741842,s214:0.2029741842):12.7161028100000006,((s216:5.6164296230000001,(s218:3.7133940970000001,s219:3.7133940970000001):1.9030355269999999):3.1149687089999998,(s221:4.9410893590000002,s222:4.9410893610000004):3.7903089730000001):4.1876786619999997):2.7811719639999999,s224:15.7002489599999997):8.1136411430000006,(s228:16.4039877199999999,s229:16.4039877199999999):7.4099023769999999):20.1939318900000018,(((s235:1.164761961,s237:1.164761961):30.9289779899999999,(((s239:11.8092034100000003,(s240:1.1451934539999999,s241:1.1451934539999999):10.6640099599999996):6.4760607239999999,(s243:5.3663286640000001,s244:5.3663286640000001):12.91893548):0.5879546054,((s246:1.021385454,s247:1.021385454):2.2789929720000002,s248:3.3003784249999999):15.5728403199999992):13.2205212099999994):1.9422983140000001,((((s252:0.8909838051,s253:0.8909838051):1.4460778729999999,(s254:0.5364767172,s255:0.5364767172):1.800584961):0.5351456596,s256:2.8722073379999999):1.872321111,s257:4.7445284489999997):29.2915098100000009):9.9717837229999997):17.8392979599999997,(s266:27.9293939900000012,(s268:4.2347317469999997,s269:4.2347317469999997):23.6946622399999995):33.9177259599999985):17.5285275700000014,(((((((s283:0.4995078195,s284:0.4995078195):2.3766585789999999,s285:2.8761663990000002):13.2757500999999998,s286:16.1519164900000014):14.5552332300000007,(s288:9.1306009830000008,(s289:5.3395037639999998,s290:5.3395037639999998):3.791097218):21.5765487399999998):2.4713881350000002,((s292:0.1094902985,s293:0.1094902985):21.110084839999999,s296:21.2195751399999999):11.9589627200000006):12.9721000100000001,s307:46.1506378699999971)LEE:9.3515165059999994,(s325:1.575825061,s326:1.575825061):53.9263293200000007):23.8734931400000008):10.7713989100000003,(((s340:9.9405505230000006,s341:9.9405505230000006):21.0295773699999984,((s345:9.0691226749999991,s347:9.0691226769999993):1.9682665619999999,(s348:7.1978738189999998,s350:7.1978738189999998):3.839515418):19.9327386599999983):45.3301916799999987,(s381:4.5261479199999997,s382:4.5261479199999997):71.7741716599999933):13.8467268499999996):9.8529535619999997);\n' + elif name == "pxnj": + cm = "./pxnj -s TEST/test.fa" + t = '((((TaxonA:0.300000,TaxonC:0.300000):0.112500,TaxonB:0.437500):0.087500,TaxonD:0.250000):0.100000,TaxonE:0.100000);\n' + elif name == "pxnw": + cm = "./pxnw -s TEST/test.fa | grep TaxonA | grep TaxonB" + t = 'TaxonA\tTaxonB\t40\n' + elif name == "pxpoly": + cm = "./pxpoly -t TEST/polytomy.tre -x 39" + t = '((TaxonX:0.13,TaxonW:0.36)0.99:0.39,(TaxonD:0.23,TaxonE:0.16)0.94:0.3);\n' + elif name == "pxrecode": + res = True + print("RY-coding ", end = '') + cm = "./pxrecode -s TEST/test.fa -r RY" + t = '>TaxonA\nRRRYYYYYYYRYYYYYYYRR\n>TaxonB\nRYYYRRRRRRYYYYRRRRYY\n>TaxonC\nRYRYYYYYYYYYRRRRRYRR\n>TaxonD\nYYYYYRYYYRRYYYYRRYRR\n>TaxonE\nYYRYYRYYYYYYYYYRYYRR\n' + if not check_individual_results(cm, t): + res = False + print("MK-coding ", end = '') + cm = "./pxrecode -s TEST/test.fa -r MK" + t = '>TaxonA\nMMMKKKMMMKKKMMMKKKMM\n>TaxonB\nKMKMKMKKKKMMMMMMKMMM\n>TaxonC\nMMKMKMMMMMKKMMMMMKKM\n>TaxonD\nKMMKKKKKMMMMKMMKKKKK\n>TaxonE\nKKMMKMKKMMMMMMMKMMKK\n' + if not check_individual_results(cm, t): + res = False + print("SW-coding ", end = '') + cm = "./pxrecode -s TEST/test.fa -r SW" + t = '>TaxonA\nWWWWWWSSSWSWSSSWWWWW\n>TaxonB\nSSWSSWSSSSSSSSWWSWSS\n>TaxonC\nWSSSWSSSSSWWWWWWWWSW\n>TaxonD\nWSSWWSWWSWWSWSSSSWSS\n>TaxonE\nWWWSWWWWSSSSSSSSSSSS\n' + if not check_individual_results(cm, t): + res = False + print_success(res) + return res + elif name == "pxrevcomp": + cm = "./pxrevcomp -s TEST/test.fa" + t = '>TaxonA\nTTAAAGGGACAGGGAAATTT\n>TaxonB\nGGTCTTGGGGCCCCTCGAGC\n>TaxonC\nTCATTTTTAAGGGGGAGCGT\n>TaxonD\nCCACCGGAGTTGAACAAGGA\n>TaxonE\nCCGGCGGGGGGGAATAGTAA\n' + elif name == "pxrls": + cm = "./pxrls -s TEST/test.fa -c TEST/oldnames.txt -n TEST/newnames.txt" + t = '>Cinclus_mexicanus\nAAATTTCCCTGTCCCTTTAA\n>Anodorhynchus_hyacinthinus\nGCTCGAGGGGCCCCAAGACC\n>Stellula_calliope\nACGCTCCCCCTTAAAAATGA\n>Anser_anser\nTCCTTGTTCAACTCCGGTGG\n>Gallus_gallus\nTTACTATTCCCCCCCGCCGG\n' + elif name == "pxrlt": + cm = "./pxrlt -t TEST/kingdoms.tre -c TEST/kingdoms.oldnames.txt -n TEST/kingdoms.newnames.txt" + t = '(Eubacteria:4200,(Archaea:3806.0102499999998145,((((SAR:1626.0427319999998872,Plant:1626.0276670000000649):72.3801839999999999,Excavata:1698.4229159999999865):74.7312199999999933,Amoebozoa:1773.1541360000001077):7.9375349999999996,(Animal:1295.717544000000089,Fungi:1295.7033610000000863):485.3800600000000145):2024.9200000000000728):394);\n' + elif name == "pxrmk": + cm = "./pxrmk -t TEST/knuckle_tree.tre" + t = '(((((s4:0.1190332191,s5:0.1190332191)C:0.02544171746,s6:0.1444749366)D:0.7647640019,s7:0.9092389385)E:0.76874935,(s3:1.2572336289999999,(s1:0.3603553431,s2:0.3603553431)A:1.1968782862)B:0.5207546592)F:0.06349158892,((s8:0.3106889265,s9:0.3106889265)G:0.1031508249,s10:0.4138397514)H:1.3276401259999999);\n' + elif name == "pxrms": + res = True + print("command line arg ", end = '') + cm = "./pxrms -s TEST/test.fa -n TaxonA" + t = '>TaxonB\nGCTCGAGGGGCCCCAAGACC\n>TaxonC\nACGCTCCCCCTTAAAAATGA\n>TaxonD\nTCCTTGTTCAACTCCGGTGG\n>TaxonE\nTTACTATTCCCCCCCGCCGG\n' + if not check_individual_results(cm, t): + res = False + print("regex ", end = '') + cm = "./pxrms -s TEST/test.fa -r .*A" + if not check_individual_results(cm, t): + res = False + print_success(res) + return res + elif name == "pxrmt": + res = True + print("command line arg ", end = '') + cm = "./pxrmt -t TEST/test.tre -n TaxonA" + t = '((TaxonC:0.25,TaxonB:0.155):0.4,(TaxonD:0.23,TaxonE:0.16):0.3);\n' + if not check_individual_results(cm, t): + res = False + print("regex ", end = '') + cm = "./pxrmt -t TEST/test.tre -r .*A" + if not check_individual_results(cm, t): + res = False + print_success(res) + return res + elif name == "pxrr": + cm = "./pxrr -t TEST/test.tre -g TaxonA" + t = '(TaxonA:0.05,(TaxonB:0.03,((TaxonD:0.23,TaxonE:0.16):0.7,TaxonC:0.25):0.125):0.05);\n' + elif name == "pxs2fa": + res = True + print("nexus ", end = '') + cm = "./pxs2fa -s TEST/Concat_Sequence2.NEX" + t = '>Sequence1\nAAATTTCCCTTTCCCTTTAAA\n>Sequence2\nGGGGGGGGGGCCCCCCCCCCA\n>Sequence3\nCCCCCCCCCCCCAAAAAAAAA\n>Sequence9\nAAATTTCCCTTTCCCTTTAAA\n>Sequence10\nGGGGGGGGGGCCCCCCCCCCA\n>Sequence11\nCCCCCCCCCCCCAAAAAAAAA\n>Sequence8\nTTTTTTTTCCCCCCCGGGGGA\n' + if not check_individual_results(cm, t): + res = False + print("interleaved nexus ", end = '') + cm = "./pxs2fa -s TEST/AA_interleave.NEX" + t = '>TaxonE\nAWWYHNTLNCRGWGEFRYLTHEFCCHWGNAFYHICHNYDNGPTTERFLTIQTWTARDRWCCKHSVHWNFQENFSTYGLKQRFQNQHSCNRHIVRQLWNNLRFFICICQIKRGKGNKCQFCILHYFIHLPSLACRLSYAFGYLRHNWFGTLTPYGFASPPNWYMRSEPSFGNSWNMAIQIANAFRTWKYRECGYSIKQSCDSTLMWPHRYWMIAQYTFQVTDSRTYDFITSSLVVYAFLCDAQARADCIDQ\n>TaxonD\nHWPYHNEWNQRGWGVFRYLTHEFMCHQHRLFYHICHNYDHGPTTERFKAITTWTAQDRWKSGHSVHGDFQENFCTYGMKMRFQNQHSCNRHIGRRLQNNLRFNYCYCQIKRYKGNKCQFVQLKVDIHDKSLAANLIAASMYLRHMWFGPLTPYGFAVPPNWMMVSGPSFGKSWHMQIQIRNAYVTWKYRGKGYSICQSPQNKLMWPNRYWMIEIYTFIVTDIRTALFIQISLSEYAFSCDFIPRQDMNWQ\n>TaxonC\nQVFYATEVNFRDIGSEGFLTCEFLDHFDAHEEKLLHNYVEKPWIEEPLWWRTRKRDDMYFSYHWDFLDFQENFDMHAYSMVMPQQHSYRFGEYRQVVNNLYYFNAGPMGHRQKMNNKQGCRMHYFIAYAQAQFNSGYHAEYLKMLSTGGLDLSGESSDPNWAKMSGESEGWSHWVAMLMRNYYRHGKSHGCKMFKHAYESEKLRCIGISSSGDQYCFTVRDSSGYRFDACVLECKTSLAACGHNANCGWP\n>TaxonB\nQVFYHNEVNCRWINEKGILTHEPLDHFDAHNQHILANNVETPVIYRPLWWRTRKAMDRWFYKTSVHWDFQERFDTHGYSMVAPQQQSCNRAEYRQVVNNLRRFIQPQDGHGRKMNVKQGCRMHYFIARASLEFNSGYHAEYLKQLWLGGLDFSGEKSMLNWAKMSGESEGWSHWVYMLMRNYYRHGKLHGCSHRKEALESEKLRCIGIMRWWKQYAFKVRDISGYRFDRCYLICKTLLYDDGCKANCNWP\n>TaxonA\nQVFTHNEVNCRWHIEKGILTHEPLDHFDAHNHHILANNVETPVIYRPLWWRTRKAMDMWFLKSSMHWDFQENFDTMAYSMHAPQQQSKHSAHYRQQVNNLRRFIQPQMGHGRKMNNKQGCRMHYFIAYASLQFNSLYHAEMLKQLWTGGLDFSGEKSMPNWAKMSGESEGWSHWVLMLMRNYYRHGKLHGCSHRKEILESEKLRRIGIMRWWKQYAFKVRDISGYRFDRGYFGCKTLLNDAGCKVNCNWP\n' + if not check_individual_results(cm, t): + res = False + print("phylip ", end = '') + cm = "./pxs2fa -s TEST/morph_data/morph.phy" + t = '>Erythrosuchus\n0001000000000210010101000000100000000100010000?00000000000000?00?000?0010010000000000010000?001??00000??0011?000002000000000000000000000?000?00??000000?00?00001?000001000000000000?010000?0000010000?00000000?000010000001?00000000???100000000000000000000000000000000001100???010000???????0?0000?00000?00200000??0000000000000000000111111111112?00?000000?10??000000???01000?0?0000?0000?00?0000?100000?0?0????00000000?01??10??0101001000000000\n>Euparkeria\n000001001000021000000100000110010000000000000000000000000000000000000000?01000000000100000000000000000000000?0000020000000000000000000?0?0000001000000?000??00000000000000000000000000000000001000000?0000000??0000100000?0?000000000011000000000000000000000000030000001003000?001000101231120100001000000?000010022000000000001000?000211111111112?00?0000001000?000000??001000?0??00000000000?0000?1000000000???000000100?000010??0000001?00000000\n>PROTEROCHAMPSIDAE\n1000000000000001000000100000000000020000000000000010000000100???0?????00000000000000000000000001000000000000?0000020000000000000000000?0????000000?000??00?00000000000000000000?000000100000001000000?00?00000?00000000000000?111000001100000010000000000000000203000000?0?0001??01000001231120100001000000002??00?22000000000001?000000011111111112????0000001001?000000???01000?0??0000000?0?000000?1000000000????10000000?????10??00?0001001000000\n>Scleromochlus\n101012?0100000?00000110000001??00000?0??01000???00?2???????????1??????01????0000??00???2??00??02210000110000?00000200100001???00010000?0?????00?1??100??01?0000??0?00?0?0?????1?011101110000000??0000?0000?000?000000000000000?00?00000000000000000000000?10?00??????????????00??010001?0000000000000000000?0???00?0000000000000??00?000?11111?1111100??0?00?00000?000?00???00000?0??000??0?0?0100001?0000000?????0?10000??0?00??10??????001?01?00000\n>Eudimorphodon\n10001000100000010010?00000?0?0000?0?????00000???0??0??????????????????01????01000??0000200000??222000011000120110021010000000000000000?0????0??010?10100?0?2010???0???????12221?011?01??00011111?111111111111111111210111111?1000000??0100?000100000000??????00??????????????0???010000?000000000000000000??0???000000000??0000?0?01?00021111111311210010000?001??0?00?01?100010??0?0000??000?110000??00000?????021000000??01000000??00?0000?0102?000\n>Peteinosaurus\n???????????????????????????????????????????????????????????????????????????????????00??10000???22200001100012???0???01??00???00?00000??????????????10?0?00?201????0???????12221?01110101000??????1111?1?111111111112???11111?0????????0????0??????????????????????????????????????1?000?00000000000000000????????0000?????????????0??00???111?11?11?10010?00?001?0000?????1000??????00000?0?0?110?00?????????????210000????0100000???????000?0??????0\n>Preondactylus\n10?0?0????0000?11010???000?0????00????????????????????????????????????00????0100???00?????00???22200001100012???0???????00???00?00??0??????????????1?????0?201???????????????????11101110001111??1111?1111111111?11?110??110?0?00?00??0100?00010000000???????00??????????????0???01000??000000000000000000???????0000?000??0000???0100002111111131121001??00?001?00?00??1?10?010??0?0?0?0?0?0?110?00???00????????2100000???01000000??0??0000?0102??00\n>Austriadactylus\n1000?0?01?0001?11010???000?0?00?0??????????00?000000??????????????????????????????????????00???222000011000?2????????????????????????????????????????????????????????????????????11????????111111111?11?10??????????10?11??????00?00??0100?000100000000??????00??10??????????0???01?00??000000000000000000???????0000?000??000????01?00011111111?1121001??????0?????00?0??1???10??0???????????0???0????00000?????2?????0?0???????????0??0000?01???00?\n>Lagerpeton\n???????????????????????????????????????????????????????????????????????????????????00??0????01122????????????00100200000010001010110010001?1000001?10?0101020200?110?1011212221011101011110???????0????????????00000??????????????????????????????????????????????????????????????????0?00000000000000000??????????00???????????????????????????????????0000001001100???????10???????0000????????0?0???????????0????000??????????0000????0???0??20??0\n>Dromomeron\n??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????10010001?0000011111??1010??20??1100101021222????????????????????0??????????????00?????????????????????????????????????????????????????????????????????00000000000000000??????????00????????????????????????????????????????0000???????????1??????????0?????????0?0?????????????????????????????????????0???0???0???\n>Marasuchus\n?0????????0???????00?1?????????????????????????????????????00021?1??????????112000000000000?0012210000110001?10100200000012002100100000101?1111000111?1001120000?1000101101000101110101111???0????000??010?0???0000000?00??????0??????0?0?????????????????????????????0??0????????1???0?000000000000000000????00?0?00?000?????????????????1111?1?111????0000011000?00???????10????00?000???0?000?0?0????0????000????100???0??????00????0?00??0??000?0\n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????0000001?????????0??01000000000????000?0???0000??????????0?01000000?????????????000000?000?????000????0??000?0????0000??0?0????000000??000????????0000?00????0?000000000??0?00?????0???????0?00??????0?0??000??0??????0????0000?????????00?0????1???00??00???1?000\n>Arizonasaurus\n000010100??????11010000011??00001000?0000000?00011?000100000000?010110101111??111000???01001000100100000000000000???0????????????????????????????0?0?00000??0??0????00???000?????00000??0000?000000000000000000????000000?0000?0000000000?0000????0000?????01?00???10?10??00??00?????000?0000?0?0?0??????000????10??000?0???01?000\n>Arganasuchus\n???????????????10?1?0???????????????????????????????????????00?????0?0?????????????????????????1???0000000010000000?????1???????????????????????????0??0????????????0000?00???????00?0??000?????????????????????????0?0?0????????0??0?????000???????0??????01????????000?????????????00????0????????????????????????????0???0??0??\n>Batrachotomus\n000110101000?001111?0111000000101010101101100000??100000000110000000010111000?0111?0010010000001000000000000000???0000001?????????0???00??0?00000000000000??000000??00000000?0?0?00000??0000000000000000000000000?0000000?0000?000100000000000????000000??001000???10010??00??00??00?000?00000000?0????00000????10??00010000000000\n>Bromsgroveia\n????????????????????????????????????????????????????????????????????????1?11??11???????01101010???1?0??????000?????????????????????????????????????????0??????0?????00?????????????????????????????????????????????????00?????????????????????????0?0??????0??????????????00??????????????????????0?????????????10??????00???????0\n>Effigia\n00100010001011010110100011000000110100000000111010?110111??00111110001001111??1101?010?10010111111111010110000?01?1100000010110000?00001011101011000?10000?0000000??0000000000000000100?000000000000?0000000000?1?0000000?0?0000000000001?0000?00?00010000001?00??1000?0?0000?000?100000?100001???00?00010?0????000000100010010100\n>Fasolasuchus\n?0??0????00??001111?0000????????????????????????????????????10??0000000101??0??????????????????1???010?0???10000?0??????10101000000?????????????0000???0????000?????0000000????0??00?0??0000000???????????????????0?00?00????0?0000?00????0000????000??????01???????00?0??????????0??00?00?0????0???????000??????0??0??00?000??000\n>Lotosaurus\n0001100100101100011?100001000010101000000?00000???1000?0????1100000000101110?111??0000010000011????00000?00000001001000000101?0?000?????????????00000100???00?0?00????00000??0?0?000?0??00000000000000000000?00?0?0000?00?0??0?0000000001?0000??????0?00???00000???010?0??000??0???0?000?000000?0?1????01000????0???00?0001?000100\n>Poposaurus\n??0???????0??????????????????????????????????????????????????????000110011110?111???000010001101001000100000000000?1?000?0101100000????????????????????0?0?0?00?000?0000????00000????????????????????????????????????0100?????????????????????????0000??0??0??????????????00???????0??0???????????1????0????????00??????00?0??0??0\n>Postosuchus\n000100111101000001100011101?0100001001110101?000010001000??0100?000000001100110011??01001000000100000000000000001001000000101100000??00000?100000000000000?00000000000000000000000000000000000000000000000000000??0000?000000000000000100000000000000?000000100000100010?00000000?00000000000000???0000000?0000010000001000?000000\n>Prestosuchus\n?1011011?0000000111?01111?0000?0??1010110010?0??????????????0000???????111001?00010001001000000?0000000000000000000000001010100000000000000100000000000000???00000??00000000?????00000??00000000000000?00?00??0???0000?00?0??0?0000000000?0000????0000000000000???1000?0??0000?0??00?00??000000???0??00000??????100?00?000??000000\n>Rauisuchus\n??0????1???000???1??0000???????????0?1?10?00???0??????????????000000000101001?0011?????0100000010?????????????????0?0000101010000???????????????0000?00000??000?????00?000?0??????00?0??0?00000????000?00?00??????00?0000????0?0000??0?00????0?????00000???0?00????000????000??0??00????00????0?0?0?????0?0?????1???0??00?????0?00\n>Saurosuchus\n010100111101000001110000100010101010001100000000000000000?0000????????010100??00???????010000001000000?0???00?0??0???00?101010000000000000100000000000?0??????0?????000?000??????00000000000000000000000000000000?0000?000000??0000000000000??????000??00000100???1000?0??00000???????0000000000??0??00000??????100000000???000000\n>Shuvosaurus\n00100010001?1100?1011000111000001101000000001110101110111??001111110010???11??1100??10010010111111111010110000101011000000101100000?0001011101010000000000?0000000??00000000?0???000100?10000000000000000000000?1?000?00000000?0000000001?0000????0001000000100???1000?0??00000???11?000?000001??00??00010?0????00??001100??010000\n>Sillosaurus\n?????????????????????????????????????????????????????????????????10111001?11??11???????01?00?1?1001000?0???00?10???????????????????????????????????????0????0?0?????000??????????????????????????????????????????????0000?????????????????????????000??????0?????????????????????????00?????????????????????????????????0???0????0\n>Stagonosuchus\n??????????????????????????????????????00????????????????????????001000010100??00????010010000001000????????????????????????????????????????????????????000??0?0?00??00?????0????????????????????0???0????????????????0?00????0????????????????????000??????0??????????????00??????????????????????0????????0????10???????0???????0\n>Teratosaurus\n?001001110000000011100101?1101???????1?10101000001??????????00???0??00?????????0???????01000000?????????????????????????????????????????????????000000??????????????????000???????00100000000000?00000?00000??0?0?000?00000??0?000000010??00???????0???????01?0????00000??00???????????00?000?00000?????000?????1???00?1?????0?00?\n>Ticinosuchus\n0??????????????1111?0???????????????????????????????????????0????0000001????11??000000001000000?000000?0?????00??00??00?10?01000?000?00000110?00???0???000?0000000000000?00000000?00?0??0????????0????????????????0?00?00?????0??0??00????000?00000000000?00???0?01????0??0000??0000000????0????00?000000?00000010??????000?0?0?00\n>Tikisuchus\n000????1?1?????0011?0????????0?0???0?0???1???????????10?0???1?000??????????????????????????????10????????????????????????0?0??0??00???????????????000?0?????????????00???00??????000?0??000?????00?0?00??????00????00???0????0???0?00000??0?00??????00??????1?0????????0????0??0???????????0?????????????0??????????????????????0?\n>Yarasuchus\n0????????1?????1?01?0??????????????0?0?????0?1???????????????????1??0000?1000?0?11??0010100000010??000?0????000??001000?????????????????????????0?01?0?000?00?0?00??0000?0?0?0????00?0??000??????0?00??0??00???????0?0000????????0??00?0???????????00?00???01??0?????0?0??00???????0?00????0??0?0????????000????????????000?0?0?00\n' + if not check_individual_results(cm, t): + res = False + print("fastq ", end = '') + cm = "./pxs2fa -s TEST/test.fastq" + t = '>D7DHSVN1:151:D12V0ACXX:8:1101:1426:1976 1:N:0:CGATGT\nNACAACAAAAACTTTATTGAAATAGTTGCATGAAATTTCAGACGTCAAAATAGTCATCTGAAAATTTACTCTTGATCCATTTAAAGCTGTTCCTTATAGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:1657:1955 1:N:0:CGATGT\nNGCATTTGTCCTTATACAGACTGAAGAGACCATTGGCATGGATCAAATCATATGTTCTTGGATATGTAGAAAATCCCTCACACCAATCATGATAAATGCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:1585:1964 1:N:0:CGATGT\nNTGGAAAAAAATAGTTCTTGGGTTTACTGAAGTTGATCATATAATCTTTAGAGTTCAGCGGCAGGAGGAGCATTTGGTGTACCCTCTGAAGTGCAAGGCGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:1539:2000 1:N:0:CGATGT\nNGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATATCGTATGCCGTCTTCTGCTTGAAAAAAACACCCAAGAGCTAGGCGACACGAGGATCTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:1881:1990 1:N:0:CGATGT\nNGATATTTCTATTCGACTGGTTAGAGAACTCTTAACTTGATCAATATAGACAAATGGAGGTGCTACAACAACATCGACATCAGCCTCCAAGGTTGCATTGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:2177:1964 1:N:0:CGATGT\nNTCCAGTTTTTGATACCTCAACGACATGGCCATCACAATGTTCAACCAAAGAGAATAAGAAGAAAATTACAATCACAAGATGAGCTCCGTTGAGCCCCTTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:2295:1951 1:N:0:CGATGT\nNAAAAGTCTGTGCCGCCCTTCAGAGCAAAACCCAATCAACCTAACAAGGTTCAAATGGTGGGTGCTGCTAATGGTTGCTACCTCCATTCTAAACTGTTTCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:2642:1999 1:N:0:CGATGT\nNGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATG\n>D7DHSVN1:151:D12V0ACXX:8:1101:2987:1988 1:N:0:CGATGT\nNTTGAGTCCCACATCCCTTCCTTTGCCCACCTGAATGTATTCATGATGGGTAATGTTTCCCTGTCTTAAAGTTGAATTGAAACCTGGATATATATCTTCGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3233:1928 1:N:0:CGATGT\nNATGATTCAAAAATTGGATAGAGTTAAGGGGGAATGCCGCTGCTGATAGATCCCGCCCAGATCAAGAATAGTTGATTATATCCAGGAAAATTAAGAGTTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3186:1968 1:N:0:CGATGT\nNTCCAGCAATACATCTTTTGCAGCAACAAGAGTGAACGTTTTGTTTGCATGAGTGGCAGGCGATAACCCGATTCCAGGTAACACTTTTCCATTTCCCAAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3407:1961 1:N:0:CGATGT\nNTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3354:1981 1:N:0:CGATGT\nNCAGGCCTCTTGCCCCCACACTCGACGTTACCGTTGATGGCGCTGATGGTAGGTCCGAAACCTTGGTTGACCACGCTATGAACGCTGCTCATCCAGTACCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3492:1987 1:N:0:CGATGT\nNTCGACTTTAACATCTGTGGTGATGTTCTTGTTTGTGAACTTAGTGCTCACATCAGCGAGAAAGAACTCTCCCTTCTTTATTCCATTGGAAGTGATGGCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3620:1923 1:N:0:CGATGT\nNAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACATCTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCAGGAATTTTAACCCGAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3698:1949 1:N:0:CGATGT\nNGAAATTTTTGCCAGGACAACTAGCCGGGGCTTGGCCTATAATGCCATCAAAGAACGCCTGACTCACAACATCCCCGACCGAGACACCGCTACTCGGGGTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:3907:1950 1:N:0:CGATGT\nNGTGAGACTAAAGCCATAGAGAAATATTCCTAGGCCTTAATTAGAGACCAAATCAAGGAGCTTCCATCATTTGCTTGCCTGGATTTCAGAACTACTATCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3953:1959 1:N:0:CGATGT\nNGCCAAAGCACCTGCATTTGCATTGCTTCCATGAGACTGATCACCCGAGCTTGAAACGAAAATACCCTGCTGGCGGGCTCGTTGGAGCTCCTGCTCAAGTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3806:1965 1:N:0:CGATGT\nNAACATATGATAGAATACATTAGATCACATCATACCACTAAACTTATAACATTAGCATCTTATTGCACAACCAAAAGCAGCACTAATTTAGAGTTGATAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3909:1974 1:N:0:CGATGT\nNTCCACTGGCCGACGCCTGGAGCGCGCAGGTGCCGAGGCACGCTGTGACAGCGCGCGCTGACTACCACAATCGCGAGGACAGCACTCCCGGAGACTGGGTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3887:1986 1:N:0:CGATGT\nNTCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGCTTGGGGCTGCATTCCCAAACAACCCGACTCGGCGACAGCGCCTCGTGGTGCGAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3753:1998 1:N:0:CGATGT\nNCGCTGACTACCACAATCGCGAGGACAGCACTCCCGGAGACTGGGTTTCCGCTGCCCTCACAATCCACGTCAGTCCGCACCCCGAGCCGATCGGCGGACCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:4218:1933 1:N:0:CGATGT\nNCATGAATTAAGTGATGTAATTAAGAAATGAATGGCACAACCACAATCGACACCCAACAACATTATCACTATATGATTAATAAAGCTATTTTCCATTCAAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4054:1941 1:N:0:CGATGT\nNTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGCTTGGGGCTGCATTCCCAAACAACCCGACTCGGCGACAGCGCCTCATG\n>D7DHSVN1:151:D12V0ACXX:8:1101:4066:1956 1:N:0:CGATGT\nNCTAGGGCGACGCTAGGGCGACGCGTGAAGACCCGGGGTAGTAAACTACCCGGACGGGACTTCCCCCTTCAAAAATTAATTTAATATCATTGTGGGCCAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4441:1928 1:N:0:CGATGT\nNGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4424:1942 1:N:0:CGATGT\nNCGAGATTCTTTCCATCTTTTTCGATGGCATGTTTGAAAGCAGCTCCAAATCCAAGCCACACTGGAAGATGAAACCTTGTCTGAGTCCAAGCGAAAATCCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4623:1935 1:N:0:CGATGT\nNTCATAAGGTGCCGGCGGCGTCCTAAAAGTAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4603:1977 1:N:0:CGATGT\nNTCAAACTCTCACCATAGCCAAAAAACTAAACAATACCAATTATACAATAAGGTCTAGATTGATGATTCTGGCCCTAAAAGGGAGGAGGTGTCTTAAGTAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4758:1929 1:N:0:CGATGT\nNATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGCAAAAAATTTCATCACTGAAAATTGACTCGCCGTCTTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:4771:1943 1:N:0:CGATGT\nNTGTAGAAGGGGAGATATTGACACCTAAGTTGACACCGCACTTCCCAGGGAGGGGACCCGCGTAGCCATAGTTGACCCCATAAGATGGGATAGTCTGTTTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4948:1974 1:N:0:CGATGT\nNGGATCTGTCGTGCTATCGCATTTATATACATGGTGTCCCGACAATGAGGTTGCAAGAGTTTATAGATTGGATGAAGCACACTTAGTTGTCTGTTTGTTGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:5023:1970 1:N:0:CGATGT\nNATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGTCACACCTTCGCAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:5376:1952 1:N:0:CGATGT\nNAGCTCTTTCTGCTCTTTCAAAAAGATAGTCAAAACCCTTACTACTCAGCGGCTTCTTTATTACTCTTCTATCTTTCTGAACTTTACTGAAATTCGCTTTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:5460:1978 1:N:0:CGATGT\nNAGATTTTCCACAGCTTCACCTAGCCATGCAACTATGCTTCAAAAGGCTTATGACATGGCTGCAAAGCACCAATTAATGGTTTTGATACACTGCTGCCAAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:5685:1934 1:N:0:CGATGT\nNCCAATCAGCATAGAAATTAGGAGTGGGTGGAATTCCCCAACCATCCACTCCACCCACAACATGAATCAAAGCTGATCCATATTGCACTAATCCGCACATT\n>D7DHSVN1:151:D12V0ACXX:8:1101:5761:1985 1:N:0:CGATGT\nNTCGCCGAGGGCACTGCTAGCAATAGAGTATAGTCTCAACTTATGGGGCTTTCCATTTTTGTCAATACCTTCAGGAATCACACCAACTGACTGCCCTTCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:6067:1929 1:N:0:CGATGT\nNGGGATTCCATCATTAGTGAGGTAAATAACAACCCTGGAGCTGGATGGAAGGCTGGCATGAACCATCAGTTCTCCAATTATACAATTGGCCAATTCAAGCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:6174:1980 1:N:0:CGATGT\nNTATAGCAAAGCATTAATCCTTTTTGTTGTGGCATCAATAGTTTCTTTGTCTCGTTTGGTACCAGTCTCAGTTACAAGTAGGCATTGGATAAGATCGCTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:6066:1994 1:N:0:CGATGT\nNGGGAATTCGCTGATGATAGATCTCGCCCAGTGTCCCCCTCCTTCCCCCGCCGCCTTCCGACCCGCGGAAGAATCCAATTTCAACTACCGGAGACTCATGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:6454:1931 1:N:0:CGATGT\nNCCTTTTTGTATCCATCAACCATCAACGGCATGGCCAGGGCACCTCTTATCGTTTTCCATCCAGTTCGTAACAAGGAAAGGAAGCCTTTCCATGTCAAAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:6486:1941 1:N:0:CGATGT\nNGGGAAAAGGATTCGTTCGTCTAGCTATTGAGAAAGGCTGTCCTTTGGTTCCAGTTTTCTGCTTTGGCCAGTCGAGAGTCTACAACTGGTGGAAGCCTAGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:6286:1969 1:N:0:CGATGT\nNGAGAAGATCGCCAAAGAATCTGCAGCTTAAACAAAAAAACTGAGCTTGGGATGGCAATGTTGGGATGAAAATAAGGATTTCACTGAAATCGTCAGGAAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:6457:1990 1:N:0:CGATGT\nNCACAACCTTTAACGTCAGGTTTATGAAGCGATATGAATGATGAGAGTAGAGTTGATTTTGGTGGTGGAAGCGCCTCTGGAATCGTTCCAACAGTTTGCTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:6510:1923 1:N:0:CGATGT\nNCATCATCACTTCCACCAGAAATATAATCACCATTTTGGCCCAAGAAAGTAGCCTGCTTTATGTCAGTTCCCACATTACAGTGTCCAACATATCTCTGTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:6738:1950 1:N:0:CGATGT\nNGACGATAGCAATATTTGTAGGGACTGACCTCCATCCAATCACCTCTAGACCCTCTTGTGAAAATATACTTGCAACAACTTTTCTCGCTTCCTCTGCAAGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:6546:1958 1:N:0:CGATGT\nNTGACACTGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:6727:1973 1:N:0:CGATGT\nNAAAAAAATTGGATTTCGTGTAATAAGTTTGATATTCATCAATCCCTGTTAAAAAATAATCACAAAAATCTAAACATTTATCTATCCATCCATAAGGTAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:6717:1990 1:N:0:CGATGT\nNCCAAGGATCCAGCACACGCGTCATTAGCATCACCGACCGTGAAACTTAAGACGTATGTCTTCTTAGGGATGGTTCGGACCACTTGAGCGATCGCGCTCTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:6984:1979 1:N:0:CGATGT\nNGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTTCGGGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCCGCTCAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:6784:1985 1:N:0:CGATGT\nNTTTTTCCTTGGTGTAAAACTTCCGGTAGATTTGCTCACCTTCTTCAATAGTCAGCACACCTGGAAGGACTTTCTGCAAACCTTCTGTTTCCAGCATCTCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:6839:1992 1:N:0:CGATGT\nNACAATTTTGCCAAAAAAATGAAAAAAACCCAAAGGATAATCGAAACGAACAAAAACCGAAACAAGAACTTCGCCGGAGAAGCCTCCATTGACGGAACAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:7208:1925 1:N:0:CGATGT\nNACAGGTAATCGCTTGTGTAGGTGGTGCAACCATCACCATGGTGAGGAATAGGAGGCATGTTGCCTTTGTTAGCATTGTTGCGGTGGCCATTGTACTCTCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:7218:1939 1:N:0:CGATGT\nNTCCAGTTCTGTACTTTTTGCTGGCGAGTAGTCCATGGGTATAAATTGGCCACGTGGTATCAACTCAGGGTCCCAACAGACAAAGTATATATCACCGTCCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:7051:1973 1:N:0:CGATGT\nNCCACGTCGGTGAGCTCAATCTTCTCACATGGTGCTCCGCTGCTACAAGACAAGGCAACTGCTTCTGTCCTCGTGGTTGTTCCCTTGACGTTCCTGATTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:7128:1990 1:N:0:CGATGT\nNCCGATTTTTTCCAGCCCAAGCCCAGCTGTGAACGGCATTCGCCCAGCAGAAACAAGAACAACATCAGCTTCAAGCATGGTTTGCTCTCCACCATCTGCTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:7438:1941 1:N:0:CGATGT\nNATCGGAAGAGCACACGTCTGAACTCCAGTAACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGCAACAAACAAGAATGCTCTCCCCGCAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:7281:1952 1:N:0:CGATGT\nNTCTTCTGATTCGATTACATTGGGGCCTGCAAACAGAAAGAATGGTTCTGCTGCTTTCAGGTGGTTGTAGAGCGCCGTTGAAGAATCCATGTTTCAGCTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:7388:1963 1:N:0:CGATGT\nNCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATCCCATGTCAGGATTGGGTAATTTGCGCGCCTGCTGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:7352:1966 1:N:0:CGATGT\nNCCACACTTACCCGGAATGCCTATTGTTTATGCAAGTGATGCGTTCTTGAAACTGACTGGCTATGCCAGGCATGAGGTTCTAGGCAACAGACATAGATTTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:7463:1968 1:N:0:CGATGT\nNTGATTATTTGCAGAGATACTTTCAGGTGTAGACTTCAACAATGAACTGTGTGATTCCACAGCTCCATCATTCACCATGGAACCACTCCTACCACTTGCCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:7496:1993 1:N:0:CGATGT\nNGCACATGAAAGCATCTTGTTGATACGAAGGACATGGAATGGATGCACCCTAACACGTAGATGGAAAGCATCCTTTCCAGCAAATTTAGCCATGTACTTGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:7671:1925 1:N:0:CGATGT\nNATTAATCCTTTTGTGTCCCAAATTGTCCAATTACTTTGAGGTCCCAATATGTAACACATTGTGGCACCAATGAATGCTTGTAGTATTAGAAAATTGTCCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:7633:1929 1:N:0:CGATGT\nNGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAACAAGGGAGCGCGACCCTTCGTCCCGGCCATTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:7621:1970 1:N:0:CGATGT\nNTCCACATTCTCTCCGGCATGGCTGATTGGTTGGGCCATCTAATGGAATGTTCTTGCCACTTTTTCAACACTGAGAAGAAGCAGCAAGTGGTTAGAAGAAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:7644:1970 1:N:0:CGATGT\nNCTTCCCGGACTCGGGGGTACTGGTGTCCTTCGTCAAGAAGTTTCTTGATCTGGCCGGAGAGGTGCCCGATCACTGCCATTGGCGGTGAGATCGGAAGAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:7801:1926 1:N:0:CGATGT\nNTTCTATATCATGAGGTTGATCTCCAACGGGAACCTTAGTAATCCCAGGCAGATCAATGAGTGTTATGTTCACAACATTTGGCGAATAGATCTTCAATCGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:7782:1934 1:N:0:CGATGT\nNTGAAATTAACCCATTTGAATGTTGGGTCCATGTAATTTTTGTACATTTCAAGGATTTCATTGTGGCTCACCACACCCGGGTTAGTGAAGTTCCATATGCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:7759:1956 1:N:0:CGATGT\nNAGCCGAGTTTGAAAGTGTGAAAGTTATTTCACCACAAGGTGAAGTTGTAAAGCAACCCATGGTTAAGTTAAAGTCGCAATTTCCAACCTCTCCACTTAGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:7902:1979 1:N:0:CGATGT\nNAAGATTTTAATTACTTTGACCATTATTTTAAGTTTAATTGAGTTTTAATTATCTTTATTATTGTTATATACTCTATCTATCTCACAAAAAATTTCTCATT\n>D7DHSVN1:151:D12V0ACXX:8:1101:8152:1930 1:N:0:CGATGT\nNGAAGCGAATGGGGGCCGGCGATGTGCCTCGGTCGGATGCGGAACGGCCTAAATCCGGTCCGCCGATCGGCTCGGGGGGCGGACTGACGTGGATTGTGAGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:8046:1944 1:N:0:CGATGT\nNCGCTTTCACCGGGGAACAAAGGCTGTCCAAGTAGAAGCTCCGCCAAGACACAACCTACAGACCACATATCTATTGCATTTGTATACTCACTAGCACCGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:8344:1941 1:N:0:CGATGT\nNATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGAATAGCCAACGACACGTGCACTTGGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:8408:1968 1:N:0:CGATGT\nNGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTTAAGCGCGTGACCTATACCCGGAGAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:8298:1975 1:N:0:CGATGT\nNGAAAAATTGAGACCAATAAATGATGATAATGCGATTAGTACTCCATTTAATGAACTGGGTTATCATGATGTTGTGTTAAATGTTGAAAAAATGAAAGAAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:8512:1959 1:N:0:CGATGT\nNGGGCTTTCTTTTCTTTCTGAATATCGTTACATCAAACCCTAACCCTATACCACCACCAACCATGTCTTCTAAAGCTGGTGGAAAGGCAAAGCCTTTGAAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:8618:1971 1:N:0:CGATGT\nNAGCGATTATTATTACATCCAGACAAAGAACCTGAAGATCCAAAATAACAGCAACAATAGCAATAATAATATGCCTCTGATACAGAAATGCCAATATTGCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:8628:1991 1:N:0:CGATGT\nNGCCGACCGGTCCGCCTTTCGGTGTGCACCGGTCGTCTTGCTCCTTCTGCCGGCGATACGCTCCTGGCCTTAGTTTGCCGGGTCGTGCTACCGGCGCTGTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:8902:1941 1:N:0:CGATGT\nNCCTTCTTCTCGTACTTGCCTGATGCCTTCTCTTTCCACAACTCGAGCTGAGCAATGACTTGGTTGGTGAATGAGCAAGACATGACAAAGCTGGGGTGACC\n>D7DHSVN1:151:D12V0ACXX:8:1101:8800:1943 1:N:0:CGATGT\nNTTGAATGCTCTACATACCACCCATCCTTCTTCCTGAGGGGGTCCATTCTCATCAGATTCAAGACGATATTCATGCATAATCCAATCAGATTTTTGACCGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:8804:1994 1:N:0:CGATGT\nNGCCAAAAAAAATGCAGAATGATACAGACAAGTAGACAAGTAGTTAGTCCAACAAAATGTTCAACAAATTATACTTGATGCTGATTATACAACCAGAAAAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:9333:1929 1:N:0:CGATGT\nNTAGCCCCCACATCATATGGCAGTGATAAAGAATCTTCCATCCCTTTTCATCTTAGAATGTAGAGAAAGTACATGTAGATGAGCATAAGAACGACAGATGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:9513:1930 1:N:0:CGATGT\nNTTCTATGCAGATGTGACATGCCGTATCATGAAGAAAAGCAGATGATCTTACATCATTTGTAGAACTAGTGATCCTTGGTTTACTTGGTGTTTTATGTTTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:9612:1972 1:N:0:CGATGT\nNTCTAACTTACTAGCCATAGACATAACAAGACTAAATTTCTCGTCCATAACAAGATCATCAATGGACTTACCATCACCCATGCACCAATCAAAACAGTGCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:9547:1985 1:N:0:CGATGT\nNGAGACTTGGGTATCAACAACTAATGACAGAGGGAGCATTTGAGTTCTATCCCATGGAGAGGGAGTTGATTCTCCACGCACTGTCCTCCATGTACCTTACT\n>D7DHSVN1:151:D12V0ACXX:8:1101:9674:1993 1:N:0:CGATGT\nNGGCCATGGAGGCTGCGCTTGAGAGGGGATTGCCAGTAGCTCGTGCTTTCTGGTACGCGCGCAGGCCTGGGTCGATCTTTTTGACTGCTCCCCACATCCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:9828:1968 1:N:0:CGATGT\nNTTGGACCGAAGTAATGGAACCCTTCTTGGTGGTTGTGATACGCTCCTGAAGACCTCCAAGATCAGTTGCCAAGGTTGGTTGATACCCGACGGCAGAGGGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:9856:1989 1:N:0:CGATGT\nNGTCCTCCATGTCCTCCATGTCCATATCCACCGTGTCCATATCCACCGTGTCCATAGCCACCATGTCCATAGCCACCACTGCCTCCATAGCCACCATGTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:10195:1926 1:N:0:CGATGT\nNCACAGCATACATACACTAGAATATTCATGATTCAGCTAAGATGGTGATGAGGGACGCCAGTTGACGTTAATGATAAAAGAACACTCAACCATCTTTCTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:10231:1927 1:N:0:CGATGT\nNACACGGGCAACCACCCTCACCGCTCATTCCCATCTCTCCATCCACATACGAGATCTTGGGGGCAACACCGATGACAAGTGCGACGTTGGTGCTAGTTGAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:10231:1955 1:N:0:CGATGT\nNCAAAGTTTAAGGCCGCGTGTTGGGCTGAGGCTAGCCAAATGAGTATGGTTAGGATCTTGACTAGGTCTTGTGGGTTGTTGAGTTTGGGCCACCAGCTAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:10191:1990 1:N:0:CGATGT\nNTTTGGGGAAGCAAGGTGTAGCGAAACCTAAAGGACCACTCGAGGCACTCCGGCCTAAGTTACAGCCGACTCAGCAGCAAACACGATACAGGAAATCGCCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:10145:1992 1:N:0:CGATGT\nNCACAGGTAAGTGAAAAGCATATAAGACCGGTACAAGTGAGAACTTGATCATCTTTGTGGATAGGGTGCCACGCGGCAGCTTGCTTCTCTGCATAATAGTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:10464:1991 1:N:0:CGATGT\nNCTCGGTGATCATTGGAAATCCTTGGGCATATTTAATGTGACGAACAGACCCAACCTGTTTACCATCACCTTCAATGATCTCAATGCTCTTAAATCTGTTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:10689:1925 1:N:0:CGATGT\nNTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:10534:1952 1:N:0:CGATGT\nNCTCTGGTCAGTTTCAGTCAGAGCCAGATCCTGAGTGAGCTTCATATTTGCCTCAGCTAAGGCCTCATTACGCATCTCAATCTGACCCAATTCCATCTGCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:10744:1959 1:N:0:CGATGT\nNTCCAGCAGTTGCCGAATCTGCTCTTCTGCTAATATTTGTTCCCAGCAAAAATCTTTCACGTAGATTAGCAGCTTCATTCAGTCCTTCCTTAGCCCACTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:10668:1961 1:N:0:CGATGT\nNGATTGCTAAAGCAGATCTTGGTATAAGAATTCCCAGGTTTTACAAGAGGCTTTAAGAGATCCTCAGCCTCTTCAGCCTCAATGAAAGCACGTTTACCTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:10522:1978 1:N:0:CGATGT\nNGGAGGGAAGCGAATGGGGGCCGGCGATGTGCCTCGGTCGGATGCGGAACGGCCTAAATCCGGTCCGCCGATCGGCTCGGGGTGCGGACTGACGTGGATTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:10555:1981 1:N:0:CGATGT\nNGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGGTAAAATTCTGGATTTATAATTTATAATGAAGAGAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:10697:1991 1:N:0:CGATGT\nNGGCAGTCTGCTGAGTTGGATCCTTGCCAACCAAAGCAGGGGCAATAATCTCATTAACATTCTTAACAGCCTTAAAAACACCTTTTCCCATGTAATCCGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:10885:1950 1:N:0:CGATGT\nNCGATTGTTTAGCCATCACCAATTCAGCACTTGAAACCAAATCTTGATCTTAATCAAATGACCAAATGAACAAACACACCGATTGTTTAGCCATCACCAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:10954:1994 1:N:0:CGATGT\nNGCTCACATAACTGCTGAACCCATTCCTTGCTGCAGTGCCTCACAAATGCTTCATCACTGGTGATTGGTTCCTGACGATACTCCATTTTTTTGGTATTTAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:11132:1937 1:N:0:CGATGT\nNGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATCGGCCCGCAGAGGAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:11180:1951 1:N:0:CGATGT\nNGGCTCTTGAAACCACCAAATGCAGTACCCTTCCAAACACGGCCAGTTACCAATTGGAAAGGACGAGTAGATATCTCCTGACCAGAAGCAGCAACACCTAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:11174:1979 1:N:0:CGATGT\nNTTCATATTTCTTCTCAAATTCACCAGAAAGATGCCTCTTGACAAAAGTGGTTTTACCTGTACCGCCGTCACCGACAAGAACAAGCTTGAAACTAGGATAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:11399:1971 1:N:0:CGATGT\nNGCGCCATCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCATTGCACCCCCGATGCCTCTAATCATTGGCTTTACCTGATAGAACTCGTTTAGAGCTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:11506:1954 1:N:0:CGATGT\nNGCATGAGCATTTTGCACACCCTCGTCCCATGTATTAGACACCACCGAGGGAGTTTCAAGAGCTTGGAAGTTTGCCCATTCCGTTTCAACTTGCGACGTTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:11818:1923 1:N:0:CGATGT\nNCCCCCTCCTTGCGGTTAAGGTAACGACTTCGGGCATGGCCAGCTCCCATAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGAATTCACCGCCGTATG\n>D7DHSVN1:151:D12V0ACXX:8:1101:11986:1927 1:N:0:CGATGT\nNCCCCGTCCTCTGCCACTAACAATAAAAACAGTGTTCTTCGGATCATTGCAGAGGGTGTTCAAGAGCGATATGAGATCACCGCTTGGTGATTTTACAATGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:11889:1929 1:N:0:CGATGT\nNCGCGCCATCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCATTGCACCCCCGATGCCTCTAATCATTGGCTTTACCTGATAGAACTCGTTTAGAGCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:11908:1946 1:N:0:CGATGT\nNTAGAATTGAATATGAGAGTCCGATATTGTCGGCGATATCCAAGAGTCTGCATAAATGTGAACAGAAGCAAAATCGATGCCGAGGATTTGATGGTTTCTAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:11932:1983 1:N:0:CGATGT\nNCCGATGTTTTTTTACATCTCACAGCTTCGGCAGATCGCTTAGCCCCGTTCATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:11900:2000 1:N:0:CGATGT\nNGATCGGAAGAGCACACGTCTGAACTTCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAGGACCTAAAAGGGACTGGACGACGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:12165:1969 1:N:0:CGATGT\nNCTCAGGTCCAATACGTCTAAAATTGTATAAATTCAGTAACTCATCAACTGTAGGCTCCCAAGGAGCAATTTTACTTTTCTCAATTGCCCCATAAGTAAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:12387:1928 1:N:0:CGATGT\nNCCAGTCCTGTATCTCTAGACTCCGCTCAACAAGTTATTGCTAACATTGTTATACGAACAGGCACATGTTGCGCAAAGGGCCCGTTTAAAGTCCCAATGAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:12407:1934 1:N:0:CGATGT\nNGGGGGCTCGAAGACGATCAGATACCGTCCTAGGCTCAACCATAAACGATGCCGACCAGGGATCGGCGGAGGGTACTTTTAGGACGCCGCCGGCACCTGAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:12364:1941 1:N:0:CGATGT\nNAAAATCCGGAGGACCGAGTGCTGATCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGCCAATGGAACAATGTAGGCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:12324:1944 1:N:0:CGATGT\nNCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:12432:1955 1:N:0:CGATGT\nNAGGTATTGGTTTATCATGGTGAAAAAAGACCGGTATTTTTTTTTGAACCGGGTTCGATTTCAACAAAAGATCACACTTGGGTCGCATAGTTGCAGCAATG\n>D7DHSVN1:151:D12V0ACXX:8:1101:12300:1960 1:N:0:CGATGT\nNGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:12409:1966 1:N:0:CGATGT\nNTGCAGCTAGCATTGGAGATAACAGTGAGGTCTGATGTGTACTCGTGCTCGTTAACACCAACAACGAACATAGGAGCATCCTTGCTGGGAGCAGAGATGAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:12986:1925 1:N:0:CGATGT\nNGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAATTTTAAAAGCCAAGTCCTCCATCTGCATCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:12797:1952 1:N:0:CGATGT\nNAGATGATGTGTTGATTATGCTACTTCCTTCTTTCATGTGTGGCAGTGAGTACCTTGCCATGAAGAAGTAAGCGAAGATATTAGTTTCAAAAGTCTCTCGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:12954:1969 1:N:0:CGATGT\nNTACGGGTACCACCAGTAACATGTCGCCTTGTTTATGGCCCGATTTGATGTACTCGACTAGGCCCCTTAACTCCCAGTTGGGTATTGCTCGCTTGTTCATT\n>D7DHSVN1:151:D12V0ACXX:8:1101:13082:1923 1:N:0:CGATGT\nNTCAAATCTACCTTATACTTCGCAACTTCACACTATAAAAAAAAAATAATAATAATTTAAAATAAAAAAAATTAAAACTTAAAAAATAAACCTCAACTTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:13153:1957 1:N:0:CGATGT\nNTTCTGTTCTACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:13035:1969 1:N:0:CGATGT\nNGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAATATAACAGACGTGGTGAGAAAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:13125:1977 1:N:0:CGATGT\nNCCAACTACTACGTAGACAAAGTTACATTGAATCCATAATACCTACTAAAGTAAGATCATCAGTCGGACACTTAGCGTGCAGTACATGTAGAAGAAGAAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:13364:1928 1:N:0:CGATGT\nNAGAGAGATTCCAGCCTTGGCATCAAAGATGCTTGACCTGTTGTCACCAATGAAGTCGGTGGACACAACATCATCCTCAGTGTAGCCCAAGATACCCTTCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:13315:1990 1:N:0:CGATGT\nNCCCTGCTCTCTTTTCTAGCCTCAGCAGAGTGCATGGTAATGCATGCATTGATCAACAGATTTTCCAACTCCAGGGTTTCTATTAGGTCAGAATTCCATAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:13724:1970 1:N:0:CGATGT\nNGGTGCAAACAATCATGGAAGTCATGACCTATCTCTTAAGCGAATAACACTAGATGATACATGTGACCGAAATGAGGCCACATCCACCTACCAATTTCTTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:13917:1935 1:N:0:CGATGT\nNTCCAAACCACCAGCATTGCCAAAACAGTAGCTACAACTACGACCCCAGCTCGCCTCGTTAACCTCAGTATCGACAACTGAGTTGCCGATACTGCTAACTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:13878:1958 1:N:0:CGATGT\nNAACCATTCATCCATATCATCCACACTATTTAAGGCAGTATCAATCCCTTTCAGCACCTCTTCAACTAAAGGTTCTGTTTCCAACATAGCATGCACATTTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:13779:1965 1:N:0:CGATGT\nNTTCAGACAACTTTCCATTCCCACCATCATATGGCGATGCTTGTCTTCCAACCCATCTCTTCTCTTCGTACTTTGCACGAATGAAGTTTTCAATTCCAACT\n>D7DHSVN1:151:D12V0ACXX:8:1101:13965:1981 1:N:0:CGATGT\nNCGGCGGAGAGAGGTGTTCGCGCGTCGCAGAGTGGATCAGTCGGCATGTCGCAGGGTGGATCGGTTGGCGCGTCGCAGAGTTGAGCAGTCGGCGCGTCGTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:13776:1993 1:N:0:CGATGT\nNGAACGGAATAACCAAGCAGTAAACTATACAAAATGCCTACCAAAACCAATGAATCAGGAGCTTTCTTGCATCACCGCTTCACTTGGATTCATAGCAACAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:13800:1997 1:N:0:CGATGT\nNCGGGTCACTTGAGAGACACCTCAAGGCGAGATTAGCTACCCTCATAGCATGTTCTAGAGAGTATTGTCCTTCGATACGAGGATCAAGTACCCTAAAGATT\n>D7DHSVN1:151:D12V0ACXX:8:1101:14047:1993 1:N:0:CGATGT\nNCCGCCGACATCTCCGGACTCCCTAACGTTGCCGTCAACAGCCACGTCCCGGTTCAGGAATCTTAACCCGATTCCCTTTCGATGCTCGCGCAGTCGCGCTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:14410:1939 1:N:0:CGATGT\nNCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTATCGGCCAAGGCTATAGACTCGTTGAATACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:14342:1950 1:N:0:CGATGT\nNGCAAACATTCTTTGCCCAATCTACAGGTCCTTGACCGTCAAATACGCCGGCTCCTTTGCCGCCTTGAAATGTCAACCCACTGAGTTGGTAAATCTTGATC\n>D7DHSVN1:151:D12V0ACXX:8:1101:14443:1960 1:N:0:CGATGT\nNCACAACTTCCCTTTTCCCAATGGCAACCACATTCTCTCTCCTCCCATCAACCACCTACATCCGCCACACGCGCCACCGTCTCAGCCACCGTACCAAACCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:14411:1982 1:N:0:CGATGT\nNCTTTCATGAAAAAAGGCTGAGAAGTGCAAAGTCCAGTTTTTTGAAATTCATCAAGAAGTTCTTCAGAAACCCTTGTTAATGTCAATGCAGAAGGCTTTTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:14373:1987 1:N:0:CGATGT\nNCCAACCCCAAATTAAAAAAAAAAAAAGAAAAAAAAGGTGAAATTACAAATTTGTCCATCCAATTCATTTTTTTTTTCATAAGAGATATAGATAGAAAAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:14689:1957 1:N:0:CGATGT\nNTAGAGGAGAGAAACCTGGGTGTTATCATCTGGATTCTTCAATATAGCTTCTACTACCTGAAGCATTGGAGTAATGCCAGTTCCACCAGCAACCATGCCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:14788:1930 1:N:0:CGATGT\nNGGCCCGCCCAGACTTTCAACTTCCTTATGAACAGAGCTGGGCATCGACGGGCCCACCTGGGACCGTTGTGTCAATACCATCTTTCCAAGAGGGGCCCCCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:14875:1960 1:N:0:CGATGT\nNACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:14941:1978 1:N:0:CGATGT\nNCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGATCTAAAGGATCGTTAGGCCACGCTTTCACGGTTCGTATTCGTACTGAAAATCAGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:15221:1937 1:N:0:CGATGT\nNACATTTTTAATGTCGAGGCACTTCCTTGTTGACATTTTCCCACGCAATAGATGTTGCAGGCAACATTGCATAACATAAACTGAGATCTTGGAATAACAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:15119:1960 1:N:0:CGATGT\nNGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAGAAGAAAATAAGCGACACAGCCTCATGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:15092:1970 1:N:0:CGATGT\nNCAAAGCCTTGTTATGCTCGGCCCATTTTCTGTTGAGCTCTTCAAGAAACAAAGCTCCTTGAGCAGCCTCTATGGACTTGGATATTTCCTTCAAATGAGCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:15224:1976 1:N:0:CGATGT\nNTGGGGTTTCATATTGAAATAATCCAAATAGTAAAAAAAAGATAAAAATGAGATAGATGGAGTAAAATTTTAAACAAAACACAGTATAAACATTAATCATT\n>D7DHSVN1:151:D12V0ACXX:8:1101:15243:1990 1:N:0:CGATGT\nNGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGGGAGGCGGAGTGAGCAGGCCTTCCGACCCAACAAAGTATCAAGCTTGCGCATC\n>D7DHSVN1:151:D12V0ACXX:8:1101:15082:1998 1:N:0:CGATGT\nNATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAGTAAACTTCACTGGGTATGCTCCCTTCGATAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:15381:1935 1:N:0:CGATGT\nNCCTACCTCCGGCTGACCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCTCCCGCCGACATCTCCGGACTCCCTAACGTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:15393:1966 1:N:0:CGATGT\nNAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGTCGGAAGGAAAAGTGTTATAAGCTTTGAATGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:15619:1933 1:N:0:CGATGT\nNGGCTAGTTAAACAAGTATATACACGGCAGATGGAACATGACCTTTCAATAGTAGGACAACATACTAGATTTCCCTCTCTCTTCTTTAATCTATGTAGTAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:15746:1943 1:N:0:CGATGT\nNTCGAAATCAAACTCCACTTAATCAAATTGAATAAAAACTGGTCTGAATTTCCAGCCCAAAAATTATCGTACCTGAAATATCCTAGACCCAACGTTGGGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:15709:1964 1:N:0:CGATGT\nNTGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCCAACTGCGCGCTAACCTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:15574:1977 1:N:0:CGATGT\nNTGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:15917:1981 1:N:0:CGATGT\nNACGCTTGAACCTTGCAATACCACGCTGCTCCAATCAATTTATGCATCATCAAATCATATAACCTTCTCCACGATGAACACCACTGACCATACTGTCACAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:15836:1987 1:N:0:CGATGT\nNCTTGCGACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGCGTCCTAAAAGTAACATCCGCCGATCCCTGGTCGGCATCGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:16205:1941 1:N:0:CGATGT\nNTGGAATTTGGTGCAATAAGGTTTAAGTTAAGCTAGGACAGGGCCTGCTGCAATAGCATCTCCTGGCAGCACCTCCACAAGCTCCTTCGGGAAAACCCTCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:16409:1934 1:N:0:CGATGT\nNGGACAATTTGGATTGGCTGAGCAGGGCCACCAACTGGGCCAAGTTTAGCGCAACTGCTGGATTGGGTGTCATCCATAGAGGTCATCTGCAGCAGGGTCGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:16670:1940 1:N:0:CGATGT\nNCTCAAGGTTTCCACGATGTAGTTAGCATAAAGATCCATGGAATGCTGTATTGCATTATAAGCGGTAGTTGCTGGGAGAAATTCATCAACTGCAACATCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:16932:1937 1:N:0:CGATGT\nNAGGCATTCAGCAACACATGGTACCCCTTCTCCAACATCCTTAAACATGCTGAGATCAAATCTTCATAAATTACCCATGTACTTTGTCAACCATAGATTCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:16753:1989 1:N:0:CGATGT\nNGGAAAATTTCCAACCGGCAACAAAATATCAATAATGTACACAAAGATGCCTTCTTCTCTTCCGAAACAGAGGGCTAGTAACTTAATCTAACACCAGTTTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:17022:1938 1:N:0:CGATGT\nNTTTGAATTCACATATTGCTTTGAAGGAAGTGATCCAAATCATCAATAATGGTCCCAAATTCAAGGATGCCTCTTTAATAACAGTGCACAGATAATAAATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:17015:1979 1:N:0:CGATGT\nNCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:17401:1957 1:N:0:CGATGT\nNAGAATATTGCTCAAGAAGAACGATTGCGTGGTGGCCAGAAGGACGACCGAGAGATGATGATGGCATTTAAGGTTCAATCAGACACACGGGGAAAATTAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:17375:1968 1:N:0:CGATGT\nNGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGCATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAGTTAAATAGGGCGTCGGCGGACAGTCAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:17446:1974 1:N:0:CGATGT\nNTTGACCTCCCACTGCGAGGTCGAAGAATACCTTGGGGTTCGACATTTGTACTTTTGATTTAGGAAATTAGGGTTTTGAATTTGGGATTTTGTATTTGAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:17277:1978 1:N:0:CGATGT\nNTTGGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCGTGGCACGGCTCAACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:17493:1991 1:N:0:CGATGT\nNTCCTTTAGCTTTAACTAGTTTATCACAGTGACTCCACTCTCCATGAATGGTTCCTTCCTACACAACTCAAACCCTACTCTTCTTGGTGATCAAAGAAACC\n>D7DHSVN1:151:D12V0ACXX:8:1101:17548:1932 1:N:0:CGATGT\nNTAAGGAACCACGAGGGGGACATAATCACTTGGTTCGCTAGACCAAGTGGGGAAAAGGAGATAAACAAGGCAGAGCTCGAGGCGATCTGTATAACCATCGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:17834:1938 1:N:0:CGATGT\nNTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:17812:1949 1:N:0:CGATGT\nNCATCATTATCGGTGTCTACTTCCATTAATATCTCCTTAATGCTGTCCTCGTCAGCTATGCCGTACTCCATCATCGCTGTTTCTAGTTCATCTGTTGTATT\n>D7DHSVN1:151:D12V0ACXX:8:1101:17854:1960 1:N:0:CGATGT\nNTGAAGTTTAACAACATCTTCTCATGAGCATAGCTACTGTTTGCATTTTAATGATAAGACTACTTGATTCCAAACTAAAACAGAGAAGCATTTAATCAAAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:18152:1936 1:N:0:CGATGT\nNGCCAGCGCAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACAGGCAAAGCCCGCATCGACCTTTTATCTAATAAATGCATCCCTTCCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:18117:1975 1:N:0:CGATGT\nNGGCAACTCTGTGTGCTGCAAGACGTAAGTAGGATGTAGGAAAGTGTTGGAACTCAAACTGAAGTTGTTCTGGACTCTGCAAGAACTGCTGAATATCGAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:18281:1959 1:N:0:CGATGT\nNCTCGGTCCATCTTTTCAATCTGGACTTCTTTTTCTTTCAGAGTAACAGTGACATCGCCCTTGGTTGAAACCAAGCTCATAGTCTTTAACTCTCGCTCTAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:18421:1961 1:N:0:CGATGT\nNTTTAACAATTTTGTAATTTTTTTGCATATCTAGATGTGCAAAAAATTATGAACATAACATTATTCTGATTTAGGTTTGGTATTGGTGTTTTCTTTACGCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:18617:1931 1:N:0:CGATGT\nNGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:18982:1983 1:N:0:CGATGT\nNCAGAAATTTGAATGATGCGTCGCCAGCGCAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACAGACAAAGCCCGCATCGACCTTTTAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:19076:1949 1:N:0:CGATGT\nNACTGCAACTCTGGTGGCCAAATTCAACCATGACCTCACACCTCCACAAGCAAACCAGCAACAACCTAAACTAGTAAGCGTGTTAAAAATACAACCAGAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:19033:1953 1:N:0:CGATGT\nNGTGACATCAACTTTTTATTAAATGCTCCTATTCATTATAAGGCGGGTTACAAGTCTCTTGTTTCCGTCTTCCATCTGTTGCTTCGCTAGTGCACCTTAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:19145:1971 1:N:0:CGATGT\nNGGACGGACTGGGAACGGCTCCTTTTGGGGCCTTCCCCGGGCGTCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:19003:1988 1:N:0:CGATGT\nNAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:19450:1968 1:N:0:CGATGT\nNTCAGTTCGCCAGGTTGTCTCTTGTCTGCCCATGGATTCAGCAGCAGTTCGAAAGGTTGACCTATTCGGGAATCTCCGGGTCTATGCTTTTTTTCAACTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:19743:1963 1:N:0:CGATGT\nNTATATTCTTATTTGTGGTATTGACTTTCAACACTCACAATGGGCAGAAATATTATAACATGCCCCTCATACGAAGGCCCGATGTGAGCTGAAGATGTGTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:19669:1995 1:N:0:CGATGT\nNAACTTGGCACTTGGCCCTTTTTTCCACTACCATAATACACCTTGTGTTGGTCAGGAGATGAAAGGGGCAAGTACCAAGCAACAACCCATTCGAGATCCTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:19940:1931 1:N:0:CGATGT\nNCCGGGTAATCATTGAAATTTCATCGTGATGGGGATAGATCATTGCAACTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAACTCGCGTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:19890:1976 1:N:0:CGATGT\nNTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:19845:1984 1:N:0:CGATGT\nNGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:19811:1989 1:N:0:CGATGT\nNAGAAAAGCTCCAAAAGTAATTGGAGATTGAGGACATACCTTATCCGTCGGTTCATCATCACTCACAGGAAGAATCACAGGGGGGTTACGATTACCTTGAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:20197:1937 1:N:0:CGATGT\nNTCCTCATAAGCCCCACCCAAGAACATCCCCAGATAATAACCACCCCCACAGCCACCATTTCCTTCTCTTCCTCTCTCCCCAATGCCATGAAGGAGCAAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:20385:1965 1:N:0:CGATGT\nNCCGGTTGGTGTTGTAAGATCTGAAGTTAGTACCAACAGCATCATAAACTGCCTCATCAGTTCCTTCTGATGCAGCCTTTTCAATAATACCGAACCTTTTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:20297:1996 1:N:0:CGATGT\nNCAAACTTGTCTTTTCCAACACAACCAATGTAACTTGTTGCACCGGGTTTTTGGAGCATCCACTGGGCAACTCTGATTGTATTTTGAGTAGAACCTCCAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:20580:1968 1:N:0:CGATGT\nNAACCTCTTTACTCGTAGTCCCACCACGACTACCATAACTCCACGGTTTAGCCAATGTAGACCATGAATACGAATCCCCACCCCAAACATCCAGATCGGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:20775:1992 1:N:0:CGATGT\nNCCGGAAATTCGGTTGGCAGTTATTTTCTTTCCATTTTATCCACTTCTGCAATGACTCAGGCGAACTAAGGTTCGTGGGTCCCGGAAGACCCATTGAAATG\n>D7DHSVN1:151:D12V0ACXX:8:1101:21189:1926 1:N:0:CGATGT\nNACTACCTCCCCATGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:21144:1931 1:N:0:CGATGT\nNAACTTTTCAACCAAGTCCTTTGACAACAAGTTGGCAACGACCGCGTGATTTCTACAAGAGTCGAAACCATGAACATAGATGAATTTGTACTTTGCTTTAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:21129:1969 1:N:0:CGATGT\nNAGGGAAGATACACCCATGCCATATCCATTTTTGACCAGATTTTAAAAGAGGATCCAACTTACCCAGAAGCATTGATTGGAAGAGGGACAGCGTATGCTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:21013:1990 1:N:0:CGATGT\nNTTGGCGATGCTTTCTCAAAATTTGGGGCTAATGAACAATTGTATTGCCCTCTCCCATTTATCAACAATGTCTGGGGTTCGCCGACCCAGCGGAAAGGCAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:21251:1925 1:N:0:CGATGT\nNTGGACTAGGTGGTGAAAAGGGGGTGGGGTCCACAGCTGTTTCGAGGGGTCTTTCAGACTGGTAAATATCACCACTCAAGTAATCAAACGAACCTGCATCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:1467:2009 1:N:0:CGATGT\nGTCATCGTCCTCATCGCATTCCCCTTTTGTGGAACTGTTTCCTTTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAATTTTTAAAAAAAAAGCATCTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:1400:2057 1:N:0:CGATGT\nCCCAAACTCTGAAAACAGCTCCTTCAGCTTCTCATCATCAATGCTATCATCCAAGTTTTTGATATACAGATTAGCACCCTGATTCTTATCAGCAGCTTCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:1418:2233 1:N:0:CGATGT\nGGGCAAAGTACAAGAAAGTTGGGTCACTGGCGCCATCCTTGTAATAGGCAAAGACGCAAGCACCATCATCATGCATGCTCTCACCGACGAAGATCTGAAAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:1728:2015 1:N:0:CGATGT\nTTTGGTTTTTCATTGTTACCAGAGTCGGGTTCGGGTATGGCGGGGGCCTGGAGGGGGGGTGGTTTTTTTTGTTTGGTTTTGTTTTTTTGTGTTGTTGGTGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:1627:2074 1:N:0:CGATGT\nGCCTGGTCCGAAGTCAGAAGGGATATTTGAGACGGCTACGAATTTAGGGCATTCAGGTTGGTTTGGTTTTGATATCATGGTTAGACTGCCGAAGAAGTAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:1657:2079 1:N:0:CGATGT\nTCAGTATCGCTTCGGGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGGATGCTCTCACTCGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:1724:2093 1:N:0:CGATGT\nTGGTGGATGTGAGTTGCGTGGTATGATGCCGGGGTCACGGGCTGAAGTGAATAAAAGAAGCACCAACACATGGATAGTGAAGAGAATTGCTACCACTAGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:1651:2104 1:N:0:CGATGT\nCTGTGGATTAGAAACCGGTGGAGTGTAACGTTCTTTACCGCCGGGTTTAGAAGAAGCATTGCCGTACCAAAGCATGCCTAAGATCGCGATAATCAAGATCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:1598:2205 1:N:0:CGATGT\nCGGGGGTTTGCTGATGAAATTGAGGGGATTTTGTGTTAAAATGGATCACCTAGGGTTTTGGAAGTTTGTTACTGTGAGGAAAAAGGAACTTGACTTGTTAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:1665:2216 1:N:0:CGATGT\nCTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGTTAGCGCGCAGTTGGGCACCGTAACC\n>D7DHSVN1:151:D12V0ACXX:8:1101:1737:2233 1:N:0:CGATGT\nTTCACGGATCATCTCATCGACTTCTTCATCGGTGAGCTTCTCCCCGAGGTTTGTCATCACATGACGTAGCTCAGCAGCTGAGATGAAGCCATTCTGGTCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:1520:2247 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGCCTTCTGTTTGAAAAAAACCACCGCCACTCTCTCCCCCCTCTCCCCCCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:1928:2148 1:N:0:CGATGT\nGAGCAGTATAGTTAAGGTTGGCCTTAGCCCATGGAACAACACGGCAAACTGCTAGCGTTGGACCAGCAGCGACAACAGAAGTGATAACAGCCGCTTTAGTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:1772:2182 1:N:0:CGATGT\nTTGTCAATAGCTGTCTTGAGCAACTCAAGACCCTCCTTGTTCTCCTGAATGTTAGGAGCAAAGCCACCCTCGTCACCTACATTGGTTGCATCTTGACCATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:1894:2201 1:N:0:CGATGT\nACCAACTTCTGTTGCGATTTCGATGCTCTGCCACCTTGGAATTCATGGTCTGCTTTTCTACAATCATCCTTATAATCCACCTTGGAATTTGTTTGATTATC\n>D7DHSVN1:151:D12V0ACXX:8:1101:1966:2247 1:N:0:CGATGT\nAGACAAAAGTGCTTGAGCAGAAGAAGAATGAGGGTGAAGAACCAAATCATAAGGAGCCCAAAGCCCATCAACAGGACAAGGTCTACCAGCATCAATCCTGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2114:2022 1:N:0:CGATGT\nCCACGCTTGAGATCCTTCACAGCAACGTTCTTGACATTGAAACCAACATTGTCACCTGGAAGAGCCTCAGGAAGAGCTTCATGGTGCATCTCCACTGACTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:2137:2035 1:N:0:CGATGC\nCCCCGCTATCACCGAGAATAATGACTTTCAAAAGAGTTCTCCTTCGCGAGGACATCCTCGCTGGGCTTGCAGTTGCAGAAGTAGAATTCGACCGATCCAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2051:2037 1:N:0:CGATGT\nTGAAAACTTAAACAAACCCTGCGGCTCACACTTAACTGAGACATCCTTGGCATCAGGTAACACAACTGTCAAATACAGTTTGTTGGAGCGCTGAGCCCAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2209:2090 1:N:0:CGATGT\nTCAGTCATCATGAGTTCAAACAATGGAATGCAGGTAGTCAAGTACATCTCTCAGGGGGTCGGATATGGTAGCATATGAGTTTACAGGCCCTCCATCAATAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2111:2123 1:N:0:CGATGT\nGGCAGCAACAAACCCAACCAAACGAGCGTAGAAATCCATAGCTTACAGTGAGCGTAAAAGCAAAAATGACGCAGCAACAGCCAACCTCACCTACTGCAGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2227:2131 1:N:0:CGATGT\nTCGGTCAACCTTACACTTAGCACCAGTAGTAATAGCAGGAGTTGGATTCTTAGCGGTAGCATTTTTAGGAGGAGATCCACGGATCCCTTGACAGTTGACCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:2050:2154 1:N:0:CGATGT\nCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCGGGTCAGAGCGTAAGCTAGTGATGCTTTCGGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:2012:2202 1:N:0:CGATGT\nGGCGTACAGGTTTGAAATTTGGGAGTTGGGCCATGCAAGAATGAATCAAAAGGAGTGAGTGGGGGAGTCATTATCAAGCACTCTTTCTTTTTTTTGTTTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:2134:2227 1:N:0:CGATGT\nCGAACACGACGGGGCTCTCACCCTCTCTGGCGCCCCTTTCCAGGGGACTTGGGCCCGGTCCGCCGCAGAGGACGCTTCTCCAGACTACAATTCGAACAGCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:2125:2243 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAACGATTCTCCAGACTCCAATTCGAGCAACG\n>D7DHSVN1:151:D12V0ACXX:8:1101:2336:2003 1:N:0:CGATGT\nNTGAGGTTTTCGACGTTCTTAGCAAACTTATCCGTAGTGTCAGTGGCAAACAAGTTGGATTTGGTCAGGTCATCGTTTGTTATGGCTTCCCGCTGGCGATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2412:2046 1:N:0:CGATGT\nGATTTATTCCATGAGCTATTTAGCCAAAATGTGCATCATTTGACCAACATTATGCCTCACAAAGTTCACACTATTGATGTGCATGAGGGTGAAATGGGCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2382:2056 1:N:0:CGATGT\nCTCGTTTAGAGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2467:2115 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAACACACATACACGCACTCTATACCACTCTTGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:2262:2140 1:N:0:CGATGT\nTGCGATTTGAAGGTCTAGAAGTTAAGTACCAAAGGCAATAGCACTGATCAATGACACAGGCTACGAAACTCCGTGACTACTGTTAGAAATATAGCCTCTTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2307:2170 1:N:0:CGATGT\nGTCAGTAGCTAGATATGGATAAGGGGGCATCGAATACATATGGTGAGCTACAACAATAGTTAAAGAACCTAACATAGCTAGGTTAAGCGATAATTGAGCAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:2371:2189 1:N:0:CGATGT\nCTTACACGTGGCACCATCTTGTACCCCCAAGACATCGTAGAGCGACTTCGTATGAGTAATGGCCGTGGCGCTTGGTGGGGTGTCCACGGTGGATGACACGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:2351:2193 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAGGAAGAGCACAGGTCTGAACTGCGGCCACCGATG\n>D7DHSVN1:151:D12V0ACXX:8:1101:2366:2209 1:N:0:CGATGT\nCGGCCCACTTGGAGCTCTCGATTCCGTGGCACGGGTCAACAAAGCAGCCGCGCCATCCTACCTAAAAGTTTGAGAATAGGTCGAGGGCATTGCACCCCCGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:2402:2214 1:N:0:CGATGT\nCTTGTTCGAAAGATGTAAAGAATCAAGTAGTTGAGTAACTACGTCCTCATTGTTAAAAGGCACATCCAAATTCACCTTAACAACCATATTTTCGAAAGAGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:2427:2231 1:N:0:CGATGT\nATCGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCGTCGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2653:2019 1:N:0:CGATGT\nCTCTGACTCTACTTCGACATTTGATCTAACACCGGCTCTGGAACTCCGAACAATCTGAACTGACTCAGCCTCTGTCACTTCATACATAGTAGAACGTTTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:2530:2059 1:N:0:CGATGT\nCTAACCTTTTTGTTGTCCTTAAATACGACAATACCACTTGATGAAACACCAATCAAAACGTTTGTTTTGAACTGATCTTTGGCATCGAAAAATTCCACCCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:2526:2076 1:N:0:CGATGT\nCAAACAAGCAGAATATGTCATCTTTCACTGCAAACGACCTGGGGCGAAGAGGGGATTCACCGTCATGAGTAAATGCAAGCTGACCATAATCACCAACGTTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:2581:2077 1:N:0:CGATGT\nGTTTTGCAGTTTCTATCACTTCAGCAACATCAGCTTCTTCTGATATCATAGTTGTTAATGCAGATTTCATTTCTGTCAGCTTCACCTCAAACATCTTTTTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:2743:2082 1:N:0:CGATGT\nCCAAAACCACTAGCAGCAGCCATTGCTAGTGTAAACAACGCAACTGTCATAACTGAAACTTTACTGCCACCACCTTTCACCTCATCAAAACTGTCAGAAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:2681:2104 1:N:0:CGATGT\nGGCGCTTTGCTGGTATGGTCGATGCATCCACCTCTCCAATGTAGTATTTCTCCATCATCTCTCTCGCTGAGTCACTGTGGCCCACATCTTCGAAATCATTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2533:2124 1:N:0:CGATGT\nGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGAATTCGACTTCCATGACCACC\n>D7DHSVN1:151:D12V0ACXX:8:1101:2715:2146 1:N:0:CGATGT\nCACAATCTCGAGAAGAAAAGAAACTACAAGATCCTGAGATACTGAATGGATAGACATAAACAGCAATGAGAAAGAAGCACACCATAGAAACCAGTATAATG\n>D7DHSVN1:151:D12V0ACXX:8:1101:2654:2168 1:N:0:CGATGT\nCCGACCCATCAATTCATCTTCTTCGTATACGTCGTCGTTTCCGATATCAAATTCCAAACCCGTGAATATGAATACGAATACGCAAACTTGGCAACCAGGTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2532:2242 1:N:0:CGATGT\nCTCTGATACAAGAATAGAAACAGCACTGATGGCAGAGAAAACAGCTTTATAGGCAGTCTTCAGAGCTTCATCTAGAGTTACCAAATCCATCTTTAGCAATG\n>D7DHSVN1:151:D12V0ACXX:8:1101:2687:2249 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAATGGGTATTGCGCGTACGCTTCCAACCATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2973:2014 1:N:0:CGATGT\nCTCATAAGATGTTACACAGCAGAATCCACCTTCATAAAACAAACAACAAAATTCCCTAAGTGCTCAAATTCAAAGCAGAAAACATTCAGAATATAGACTGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:2896:2026 1:N:0:CGATGT\nGTCACCCTTCGCTCCAAACTAGTGTATGATGGCATTGTTAATACCATTTTGTACCCCTTCATTGCTGCCATAAAGGCCATACTGATCCCCATATTCCCTGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2773:2071 1:N:0:CGATGT\nTCCAAGCTTTCTTCTTTCCACCAGTGGCACGTCTTTTGTGCATGGAATCACGTGATATACCCATGTTTGGAAAAGGGAGATAAAACTTGGGTTCGTAGTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:2909:2147 1:N:0:CGATGT\nCTCCGAAGAGAAATCCAGCAGCCTGGTCTTCGTTACCATCAAAAAGCTTGAGAGCTTCGATCACAGCACTCCTTTGAAACCCCAGCTCCACCCCGTTTGCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:2877:2172 1:N:0:CGATGT\nGGCAGACCTGTCAACCTTTCATAGTTGAGATGGCAAGTGCAACGACGGGGTGTTTGGGCTGCTGTCCGACTGTTCTTGTGGATAAATCTGCCCTGCTAATC\n>D7DHSVN1:151:D12V0ACXX:8:1101:2872:2190 1:N:0:CGATGT\nCGGTAGATCCCTCGATGACGTCAATAAGGCCATCGGTACCTTTAGCCAAGGAGCAATGATCAATCCAAATATTTGAAGATTGAAATATAGAGATGCCATCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:2881:2226 1:N:0:CGATGT\nGCCGAAGGAGCCTAATGAAGATGGACTGAAAGGCATATATAGAGTGGATGTTGAAATTCCTGCAGATGACTGGGTCAATATAACGAAGTTCTATGATGTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:2789:2239 1:N:0:CGATGT\nACAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACG\n>D7DHSVN1:151:D12V0ACXX:8:1101:2815:2240 1:N:0:CGATGT\nGGATGCAAGACATTCAGCAGCAGCTTGTAACATGTCGTCAGTAATCAAGCGAGCACCTGAAAGCAACGCTCCTAAACCAATCCCAGGAAACAGGTACATAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3184:2005 1:N:0:CGATGT\nNAATCGTTGTATGGTGAGACAGTTATCCTGAATCCGTGCTTCATATGGAGTAATATGGATATATCAGGCTCGACAACTTGTCCCTCAACAGCTTGTATGTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:3120:2036 1:N:0:CGATGT\nGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGTCACACCTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3192:2068 1:N:0:CGATGT\nGGTTGAATGGGGGGCCCGCAGGCCGACGCCTTGAGCGCGCAGGTGCCGTGGCACGCTGTAACAGCGCGCGCTGCCTACCACAATCGCGAGGACAGCACTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3054:2083 1:N:0:CGATGT\nGGGAGCTTCGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTACTCCGTGAGTCGGAGGCGGGGCACAGCCCCATTTTTTGGACCCAAGGCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3224:2088 1:N:0:CGATGT\nCTAAGGCCGACTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCCGGCCCGAGGAAACC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3248:2170 1:N:0:CGATGT\nGGGGCCTAACCTTGTTCTTCCACAGGTTATGGTAGGAGGCAGAATCTGCAGCCCTTTGCATGACCTCAACCACAACAAGGTGGTCGGTCAATGGCCTAATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3163:2193 1:N:0:CGATGT\nCTACGAAGCCCAAGATATAAAAGCCCAGTCCAACGTGGACGCCATGACCACCCTATAATTAATCCGATCATGACGGCGACCCATATTGGTACTGCACATAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:3237:2212 1:N:0:CGATGT\nATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGATCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCCGGGGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3086:2218 1:N:0:CGATGT\nGTGGTATTTCACTTGCGCCGAAGCTCCCACTTATGCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:3169:2238 1:N:0:CGATGT\nCTGAGAACACCCTCACCGCTTTCAAAGGTCTCAGGGTGCTGTTAAGCGACAGTGATGACATGAACCGAGCCGTGTCTAAGAAGCTACTCGAGAAACTGGGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3321:2075 1:N:0:CGATGT\nTGGCAAACTATAGAACTTTCCAAACTCACCACCTCCAGGCTTGGGTAGACTGGTGAAGATTCCTTTGAAAGGATGCTCGGAAGCTATAGTAGCAATCTTGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3343:2075 1:N:0:CGATGT\nGTTAATGCTTCTCCCAATATCGATGCAGCAAATCCAAGCATAGCAACACGACCAACAAAGAGCTCATTTTCCTTGGTGAATCCAATTCCTCCTGATGTTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3357:2098 1:N:0:CGATGT\nGCAATCGGTTGGACAGCTAAGGGAAGTTTCTAATAAGGTCCACAATGCAGAGCTTAAATTATTCTTGGAAGTTGAGCTTGGCGTGGATTTGCGACCTATTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3411:2115 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAACAAACTCTTTAAACTTTTTTCGAAAACAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3350:2120 1:N:0:CGATGT\nGCTTCTTCGGTTTTCTCTGGAACGACTACCTCTGGGGCAGGAGGGGCTGGGGTCTCAGTCTTTTCTATCTCTGATGGTTTAGACTCAACAGGTTTTTCTTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3369:2137 1:N:0:CGATGT\nCGCAAGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTCGACGCCCGGGGAAGGCCCCAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3348:2146 1:N:0:CGATGT\nCTCTATGCATAGCTTGGTATTGGCAGGAACAAACAGGACATCACCCACATGGAGTTTATCTGCAGAGATGCATGTTCTTATTGTTCCCATCCCTTCAGTGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3442:2156 1:N:0:CGATGT\nTGGGAATACGAGTTGGAAGAGCTATTTGACGGGTGAATTCTCCCGGAGGGCAGTGCTCGGGCGTTGGATCACTTAGTTTGAATGTCCTACCATGTCTCTTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:3407:2165 1:N:0:CGATGT\nGGGGAAGTTGCTGCTGTTGGAAGTGTAGTCCGATCATTAACTGTGGGACAAGAGGTTTTTGGAGCCTTGCATCCAACTGCTGTAAGGGGCACTTATACGGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:3300:2204 1:N:0:CGATGT\nTACCCCTTCTTACCCTGAAAAACAGGGTCACCTTGCGTCCTTGAACCGATAACCATCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCGGGACCAACAAGGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:3391:2222 1:N:0:CGATGT\nCAAGCATATGGAAATTGGCTTCAATCAATTTCATGTTGATGCCACAAATTTGATCCACCGCAGGGCTGGCCGTTTCAAAATTAAGGTTGTGTTTGGTTTGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3632:2027 1:N:0:CGATGT\nAGGAAGCTGTGGTTGTGGTTCTGCCTGCAAGTGCGGCTCCGCTTGCGGAGGGTGCAAGATGTACCCAGACTTGGTAGAGGCTTCAGATAGCCCCAACGTTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3642:2044 1:N:0:CGATGT\nACCTTCAGAATAATTTTTTGGTTGTGCAAACCAAAGGGAATAATGATCTTGGGTAGTACCAAGTCGGAAACCAAGTGGATTTATTTTTTGTCCCATACTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3580:2051 1:N:0:CGATGT\nGCCTTGTTAACCTAATTACATCTTTCATGATCTTTCAATTCACTGCACACGGGTCTTCTCTTTGCCAAATATTTTTGATTTCAGAGGAAACCGAATTGACG\n>D7DHSVN1:151:D12V0ACXX:8:1101:3507:2069 1:N:0:CGATGT\nCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCAAGTACCATCAAACAAACTATAACTGATTTAATAGAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3642:2073 1:N:0:CGATGT\nCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAACATCCGAAAGGACCATCGCAATGCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3674:2098 1:N:0:CGATGT\nCGGGCAACACTCTGAAAATTTCATCAATCGGTTCAAGCATTCCAAGAGCAAGGCAGTGTTTAGTTTAAAAGAAATCATGCTCCAGTAAAATAGCTTGAGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3545:2185 1:N:0:CGATGT\nAGCAGTTCCTAGCTCGAGCTATTTCACCATTTTTCATTTCAAACTTGGCATAACGTATCCATGCCCCAACTTTAGGATGGCACTGCACAAACCTCTCATAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3876:2014 1:N:0:CGATGT\nCTGTGGACATAATCTTCGGTTGTAAGAGGGAAACTGTAGTTGATGACAACTTCAACATCTGGAATATCCAATCCTCTTGCGGCCACATCAGTCGCTATCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3999:2062 1:N:0:CGATGT\nGTATAATTATTATTTTTGCACACGATGCAGACCAAGTTGTCGTGTGCACCATTTCCAACGGGCACATCCTGCATTTAAAAACGAAATTTTTTTTTTTTTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3965:2064 1:N:0:CGATGT\nAGGAAGTCCAAAACCACCAGCAGCTTCCTTTCCTTGGTCAGGCTCAATAACTACAGGGGTACCTCCAAATGGAGCATCATTTGTTTCTTTAAGCTTTTGGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3828:2105 1:N:0:CGATGT\nGTCAGTTCCAGAGCCAAAGATCGTAGTTCTCGAACGAGCAGTCGAAAAGATTCTGGAGCATTCTCGGGGTTAGGTATTATTCCCCCAATGATCGTAGTACC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3956:2129 1:N:0:CGATGT\nCAGATTTCAGGCAGATTGGAGCATAAATGTTGTAGATGTCAATGTTTCCTACTTCTTGGGCTGCTTGATCGGCTGCATCCTCACACTCTTCCGAAACAGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3880:2191 1:N:0:CGATGT\nGACGAAATCCAAATTATTAGTCCAGTAATAAGAGTGATCTCTCCTGCTAAGTATATTCTCCCTTGTTTTTGCCACCTCCACACCTGATTTTGGATTTGGTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:3859:2214 1:N:0:CGATGT\nTTCCACTTCTTGAACTTTCCGCCGTGCTTCTTGCCAAATTTACCATGACCATGCTTGAACTTCCCGCCATGACTATGCTTGAATTTTCCTTGCTTGAATTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3990:2250 1:N:0:CGATGT\nGGGAAGACGAACACGCAAGTGGAGTCCCATTCTATGAAGTCTACTACGGTTTCTTATGCTTTGTGCGGTCCTTCCTGTTACTTCAAGCACACTAGCTGCAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:3921:2250 1:N:0:CGATGT\nCGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCGACGATGAAGCTTATCCCCCATCGTCTCACTGGCCGACCTTGACCCCTGTTATTTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:4196:2020 1:N:0:CGATGT\nCGCCAATCCGCCACCACTCAATTTTCCGCCAGCCCTAACCCTAACACGCGCGTATCGGAGCGCGTCTAAGAGAAAGCGCGTTAGATATGGGAGCTGAGATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4153:2062 1:N:0:CGATGT\nTTATTTATGAGCTCTTTATATTCCCAAAGAACCTCGAAAGTGGTAAGGGACCATCACCCTTATCGATGTCGCTAATGGAATTCTTGCTTCTAGATCTGTGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4102:2101 1:N:0:CGATGT\nCCGGGAGGTTGGTTGATAGTTAGGGATGATGGCGAGACCATTTCCGAGGTGGAGAAGATGGCCAAGTCACTTCACTGGAAATCGCAGTTTACTTTCTCTAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4103:2125 1:N:0:CGATGT\nCCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4021:2132 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAGACGTATAACGGATACGTGATGTGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4178:2154 1:N:0:CGATGT\nCTGATGCAGCTTTTCTCGACTTTTGCACATGCACAAGTTCAATTTTCAATTTTTGCACCAATGTAGATTTTCCACCAGTGATCATCCATAACTCGCCTAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4209:2174 1:N:0:CGATGT\nGCAAGCGAGAACAGTTTTTTCAAGATTTCGCTGAGTCGATGATTAGACTTGCTAGAATTGGTGTGCTCACAGGTACAGAAGGTGAAATTAGGAAGGTTTGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4193:2213 1:N:0:CGATGT\nCCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTTCGGGCCTCCACCAGAGTTTCCTCTGGCTTCACTCCGCTCAGGCATAGTTCACCATCTTTCCGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:4150:2215 1:N:0:CGATGT\nAGACCCAAAGTCTGTGTTTAGCTGATCCCCACGAGGAGTCTTCTCCAATTGATTGATCCTCTGTTCCAATTTCTTCAAGTCTTGACTACTCAGAGTCTCCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4040:2236 1:N:0:CGATGT\nCTGCTCTTCAATGCCTTCCTTCAAGGTATTTTCTGATAATGGACTTTCATGCATGGGCTCACAACCTTTCGAAACCTTTTCTGTAACTGATGAACCCGAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4459:2015 1:N:0:CGATGT\nCAGCCTTTTCTTTCCCACATAACTGTTCAACTAGTGCAACAGAATATTCCATTGCTGTACCAGGTCCACGACTCGTCACAACTTTACCATCCTGCTGGACC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4254:2021 1:N:0:CGATGT\nGTCAATATTGTCTTAGAAGTTCACACTCATTTCACATCCTTGTCACAAGAGCTAGAGTAACATAGTCACCCCTCTAACTTGCCCTTCAAAGTGTACACTAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4280:2023 1:N:0:CGATGT\nTGGGAATGCAGCCCCAAGCGGGCGGTAAATTCCGTCCAAGGCTAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4311:2061 1:N:0:CGATGT\nCCCATTCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:4255:2121 1:N:0:CGATGT\nCACCGCTCTCCGCGAATTGTAATGCAACCTTCCCGCCCATAGAGTGCCCGATAATGACATCCGGCCAATTCGAACCTTGGGATTTCACAAGCTTAGCCAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4470:2167 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAAAACCACAAACACGCAAGCACT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4530:2025 1:N:0:CGATGT\nCGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACTCAATGAGCCCGGTATTGTTATTTATTGTCACTACCTCCCCAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4521:2063 1:N:0:CGATGT\nCGATACGCATATTTCATGAATAAATACAACGAAGATACAGTAAATGAACAGGTCCTTCGAATTCAAAACGCTTGATAAACTATGCTTTTTGTATGTACAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4542:2075 1:N:0:CGATGT\nCCGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4736:2118 1:N:0:CGATGT\nGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:4590:2146 1:N:0:CGATGT\nAGCGATATTCGGACTTCAAACACTCGATGAAAGAAGCATTAGAGATACCAACACGAAAAAAAAGTACGAGAAAGAAGCTTCTCGTAGATGAATCTTCGGTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:4506:2153 1:N:0:CGATGT\nCTCGAAGCCAAAAAATAACAATCCTTCCACAAAAACAAAAGGTAAAATTAGAAAATCTTGTGCAAGACTTCAAATAGTTTTGTAACTTAGAAAAATCAGCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4725:2205 1:N:0:CGATGT\nTTATTGGAAACAAATTGTCACTGATCTTATACAGAATCTTGATTTAGACTAACAGTTCAGTGTTAATTAACTTCAACAATCCATCCTTTCTTGTCTTCAAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4612:2250 1:N:0:CGATGT\nGTTTATATTTTCACTAAGAAAATAAACAATAGTTAAGGTGCATGATATCAATATAGTTTATCTAAAGTGGAAAGATGAAAAAAGGAATAATATAAAACAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4863:2020 1:N:0:CGATGT\nCCTCCACAAGCGAAGATCCAACTGAATGTCCCTGAGCTTTGTAAAAGGTGAAAATCATTCCTCCACCGAGTAGAAGTACATCGACCTTAGCTAACAATGAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4898:2021 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAGAACCTAACCGTAGACAAGGCATGCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4775:2060 1:N:0:CGATGT\nTTTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGTTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4830:2072 1:N:0:CGATGT\nCAAAGTGTTGCCACCATAAATAATGCAGGTACTTATTACAGGAACTTGATCAGCCATATCAAAGTAGGGTCTCCAAAGAAACCGGGAGCGATCGAAACTTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4848:2072 1:N:0:CGATGT\nCGAAATAAGTGACAAGATATGTTACAATCATATCATACATACCCAACACAATGTTAACCAAAGTCATCTATTGATCATCTTCCAAATCTTATCACATATGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4784:2086 1:N:0:CGATGT\nTAGCCGTTGATGATGGAAATGATGCTTCCGGCTCTGGTTTCCACAAGAATACAAGATTTTGGCCTTTCTCTGTGGCGATTGAGTGCAACGGTACAAATGGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4914:2086 1:N:0:CGATGT\nTGGGACCCAAAACTACTGGGATGTGTTGAGCTGCCGGAACCAATGATGAGAACACCCTGTTGTTTAAGCGAAGAGATTGCTTTGCCCATGTTGTAATGATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4839:2092 1:N:0:CGATGT\nATTCATTTCAATTGGCAGTGCAGGTGCTGTCTTGCCCCACAAATGATACACACAACAGCATGTTGCGCCGCGCTACACCAAGATTCATCAAACAAATTGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4928:2130 1:N:0:CGATGT\nGTCATTGGCCTTCGCTTGCAACTTTATTAACACATCACACAACTCCAAAAGCCATAAAAGGTCTAGAATCTAAATACATAGATACCATCCTTCACATATTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4866:2131 1:N:0:CGATGT\nCCCGAGGCAAAGAGTTTTTCGTTTCTAACGGCCCTTTGGATTCATTATCTGCGAGAAAACAGCACTTGGTGTCAGGCCATCAGAGTCTTCACTAGCGAGAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4823:2136 1:N:0:CGATGT\nTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCTAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:4827:2196 1:N:0:CGATGT\nGCCAGAACCGCAACCACAGTCACCACTACAGCACGACATTTTCTGTTTCTTAATAATATTTCACAGCTTAAAAGGTTGGATTAGATGAGATGGTTCCCCCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:5190:2002 1:N:0:CGATGT\nNCCACCAGCAACATTACTTGCAGCAGAAGCCTCTATCTTCTTCTCCAAGAAAAGGCTTGGATCATTATCATCATCTCCCAACAAATCAAATGGATTTGTTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:5062:2027 1:N:0:CGATGT\nCTTTCTAATATCCACATCACATTTCATAATGGAATTGTAGGTTGTCTCGTGGATACCGGCTGCTTCCATACCGATCAATGAAGGCTGGAAAAGAACCTCAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:5114:2028 1:N:0:CGATGT\nCCCGATTCCCTTTCGATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACC\n>D7DHSVN1:151:D12V0ACXX:8:1101:5167:2041 1:N:0:CGATGT\nCCACGCTTTCACGGTTCGTATTCGTACTGAAAATCAGAATCAAACGAGCTTTTACCCTTCTGTTCTACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:5190:2138 1:N:0:CGATGT\nCCGGTTCTACCAGGAGTCGATTTTCCGGGCTTGAATTTCGTCATATCAACAAGATCTCCGAATAGTTTATCGTCACCCTTAGGTTGCTTTTTCATAGGGGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:5027:2148 1:N:0:CGATGT\nGAAAGAACCATCAGTTGTCTCGGCATAAAGCTGCATCACCGGCTCAGCAACATGCTTCCAGTCAAAATTAGACAGTGGTTTGCAAGTTTCCCACTCAACAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:5209:2171 1:N:0:CGATGT\nTCAGAAACAGGAACAGGGCTAGTGTTCCCCAAATTAAACACTCTCAATTGAGCCGGTCCGTGTTTCTTCCCACCACTACCAGTACTTTTCTCTGCAGTATC\n>D7DHSVN1:151:D12V0ACXX:8:1101:5116:2230 1:N:0:CGATGT\nACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACTCAATGAGCCCGGTATTGTTATTTATTGTCACTAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:5036:2244 1:N:0:CGATGT\nATTGAAATTGAATCAAACTGGACAAGACTGATTTGAACTGAGAACACGAATTATCAAAAGTATCGAGCATCAAGGATACCTGAACAGGATCGACTAATGAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:5343:2032 1:N:0:CGATGT\nGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAATCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCCCACTGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:5499:2034 1:N:0:CGATGT\nGCAAAGGATTCAACCCGCCGCTCGGTAGAATTGTGATTCAGAGCGGCCCTCACGGTGCATCCACCGCGATGGCTTGGCCCACGACACGTGCCCTTGGGGGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:5361:2040 1:N:0:CGATGT\nGAGGACAGGAAAGCAGCAATGAATTCGGTAAACCCGAAATACATACTGAGAAACTATCTGTGTCAAACAGCCATAGATGCTGCAGAACAAGGAGAATTTGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:5336:2078 1:N:0:CGATGT\nCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAGAAGGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:5492:2085 1:N:0:CGATGT\nAAGCAGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAACAAAGGAATTACCAAGAAGACTGAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:5382:2103 1:N:0:CGATGT\nCAGGGACGTAGTCAACGCGAGTTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAGTTGCAATGATCTATCCCCATCACGATGAAATTTCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:5441:2169 1:N:0:CGATGT\nTTGCAGACTCGGTAATTATTGGGGCTTGAAGGATTTGGTAGACATCAAGAATTCTCCTAGGGTACTTTGCCTTTTCTTTCTTATTTTTGGTTTTTGTTTGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:5279:2184 1:N:0:CGATGT\nCTGGTAACAATAGCTGAAGTGCAGCCTCAAATACTCCATAACAAAAGATGATTTTGCATGCAATAAGTGAGGGTTTAGGCCATATGTCAATGAAACCTTGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:5333:2187 1:N:0:CGATGT\nGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCGCGACGTCGCCGGCAGCGAACCGCCCACGTCGCCGCGATCCGAACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:5485:2206 1:N:0:CGATGT\nATGTCTAAATACATATAATATTATGTATACATTATTCAAAAATTAAATTCAGACAAAAGCCTCTCATGTAAAAAAGAAAACAATTTATTACTTCTCTGTTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:5564:2020 1:N:0:CGATGT\nGTACTAGACACATTTAGAAGCAAATACAACTGACTCTTGAACTTCCAAACAACCCCACCAAGACAACAACCATAGTTCTAAAATCCACCACGAAGGCGAAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:5529:2121 1:N:0:CGATGT\nCTCAAACTTCCGTGGCCTAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGATCGTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:5672:2144 1:N:0:CGATGT\nCATTCCTTTGTTAAAACCTTGGCTAAAACTCTCTACAAGACTGGCATATTCCCAAACGTTACTACCATGGGCAATGTTGAAAGGGGTCTCATCATCACTCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:5740:2195 1:N:0:CGATGT\nTTGCCGCTTTGAAACTTCCATTAGATTTAAGAGCCACTAGTGGCCTCCTTAAATCTACTGGAAGCTTTAAAGCCGGAAATGCTAGTGGTCCTCTTTATTCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:5506:2239 1:N:0:CGATGT\nGCGGGGTAGGTGCACCCTGACCTCTGGATGATAACACCGGCAGCGTAGTTACCTGCCCTGACACAATCGGCAATAGGCTTCCCTTGAACCAATTGAGACCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:5995:2057 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAACCAAAGAATACTAATAAAAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:5883:2057 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAGTGATATCTTGTTGGTTCGCCAGATGTTCAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:5786:2091 1:N:0:CGATGT\nGCAAGTTGATCGTTTGACACGTGAATTTCATATTTACATGACCCGTAACGGCCGTATCAGTATGGCTGGCGTTACAACAAAGAATGTCGAATACCCGGCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:5790:2114 1:N:0:CGATGT\nACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAACTAAGGCCAGGAGCGTATCGCCGGCAGAAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:5967:2174 1:N:0:CGATGT\nGCCAAACAGCAAAAGCAAAACAGTAGCACCGACGGACAGCACAACATCGAAAAATTTTCATCGAAAAATTCCTGTCACTACAGCAATACCAACAACCTGCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:5861:2234 1:N:0:CGATGT\nCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAACTAAGGCCAGGAGCGTATCGCCGGCAGAAGGAGCAAGACGACCGGTGCACACCGAAAGGCGGAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:6226:2002 1:N:0:CGATGT\nNGCCGTCTTAGAGCAAGTATCCACCGTCGTACCGCCACCACTTACACCACCGTCAACCACCTCTCTTCTTCTACACATGAAGAAGTTTCTACTTCCCAATG\n>D7DHSVN1:151:D12V0ACXX:8:1101:6169:2009 1:N:0:CGATGT\nCTGCCATGATCACACAACAAAGAGAAGCAACAGACAAAAAGTAAGGCATTCTAGAAACAAGAGGACCTGATAGAAATTCAAGAAAAGCCTACCTGTTCAAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:6245:2017 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAACAAAAAAAAAATAACATGAAGCCTACACCTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:6027:2024 1:N:0:CGATGT\nCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACAGCCGCTCCGCCCAGGCTCACGCCACAGGCTTTGCGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:6224:2039 1:N:0:CGATGT\nGCTGAATTGGATACATTACAACAATCTCAACTAGCATACCCACCGCAATGGAGACAATACAGAAGTTACCAATGGATGTAAGTACTTTCTGGAAGTGACCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:6019:2040 1:N:0:CGATGT\nCAAACAACATCACTAACATTGACAAGGACATAATCGTCTTTTCCATCACCATTACAATCAACATTAATACCACCACTGTCACTCACAGGAGGAAGATCTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:6204:2079 1:N:0:CGATGT\nTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGCGTCCTAAAAGTAACATCCGCCGATCCCTGGTCGGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:6003:2083 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAGAAACAGAAGTAATTAAAGAGGCTACGCGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:6103:2139 1:N:0:CGATGT\nCGCCATCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCATTGCACCCCCGATGCCTCTAATCATTGGCTTTACCTGATAGAACTCGTTTAGAGCTCCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:6135:2156 1:N:0:CGATGT\nGGGTGCCCTTGTGCAGGATATCCCGTTGGAGGGTACGCGTCCTTCGGGTACCCTTCTGGTGGCGGGTATCCTTGAGTTGGTGGAACACCAACGGGGGGTTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:6030:2174 1:N:0:CGATGT\nTGCGAGCATCATGAGAATGAGTAGACTGAATTTGGTTCAACAATTTGGAGTCTTCAGAAGTGACCGTTGTCACTAGTAGCATTTTGTTAGTAGTCACGCTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:6354:2070 1:N:0:CGATGT\nATAAGTATCGAACAAAATTGTAATCAGGACTTCTCCAGTATGTCCACCATTGTTTCCAAAGGCATGATTTAAACTGACCCCATGTTGATTGGGCATATTGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:6444:2076 1:N:0:CGATGT\nCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:6457:2115 1:N:0:CGATGT\nAGAATATCGAAAGTCGAATACTGTTTAATATGAGGTGGCACATGGCTACGTAGCGCAGCCATCTCCTTAGCCCCGAACAAGAAGGCGTTCGACACGAGGCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:6315:2119 1:N:0:CGATGT\nAGATCGGAAGAGCACATGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAACAAGTGACGATGTACAGAAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:6493:2148 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCCTATGCCGTCTTCTGCTTGAAAAAAAAACAAGTAGACGAAGAGTGGCACAGATTCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:6415:2216 1:N:0:CGATGT\nCGGCATTCTGGGAAGAGGCAGCCCCAGCTGATGCAGAAACCAAGCCAAGTGATGCGGAAACCAAAACAAGTGATGCAGAAACCAAGCTGGTTGAAGTGGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:6343:2230 1:N:0:CGATGT\nCCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:6602:2051 1:N:0:CGATGT\nGACGGGTTCGGGAATGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAAGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:6652:2057 1:N:0:CGATGT\nCGGCCGGGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:6504:2079 1:N:0:CGATGT\nCTTCTTTTTTCTTTCTTCCTTCATAACATACATTAAGGGTGGGGTACAAAAGAGTAATCAAAAGGATAATAACAACATTTAACTTAGTTAGGAAGTAACAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:6743:2121 1:N:0:CGATGT\nGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTTAAGCGCGTGACCTATACCCGGCCGTCGGGGCAAGTACCAGGCCCCGATGAGTAGGAGGGCGCGGCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:6617:2136 1:N:0:CGATGT\nCCGATCACAAGAAAAGTACTAAAATTGACTGAGACCGAAATCAAACAGGAAAGTATGATGAAAACCAGAACTTGTGGTGTATAATTAAAAGAAAAAACATC\n>D7DHSVN1:151:D12V0ACXX:8:1101:6666:2142 1:N:0:CGATGT\nCCCATACATGGCATCATGGCGGCCTCTAGGCCCCCACAAGTTATGGCCCCATGTGATGTTATTGGCATAGCCAATAACATGATACATAGGGAAATTGCTAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:6572:2145 1:N:0:CGATGT\nTGGAAGGCCAGTTTTCAAATGATGATGGGACGGAGCTGGTACGTTTAGCTTCAAGATGTTTGCAATATGAGCCCTGTGAGCGAGCAAATCCCAGGTCATTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:6581:2180 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGATCAGAAAAGTAAAGATACACGAACAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:6606:2233 1:N:0:CGATGT\nCGGTGGCGCGTGGTGGAGAAGCGCGTTAGGACCTCCTGAAGGGTTGATAAAAAGCATGTTGTGTGGGTTTTGATTATTACTATTATTACTATTATTATGAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:6826:2009 1:N:0:CGATGT\nCGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGATCAGCACTCGGTCCTCCGGATTTTCATGGGCCGCCGGGGGCGCACCGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:6938:2010 1:N:0:CGATGT\nCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:6885:2038 1:N:0:CGATGT\nCCTAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:6852:2068 1:N:0:CGATGT\nACCATTACATAATTCAAGGAATAACCAACAACAATTCAAGCAATCAAACTCCCCCTTCATCAACCAATCTAATCTAGACTTCATCCTCATCGAGCTTGTAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:6806:2078 1:N:0:CGATGT\nCCAAAAGCCCACCACAAGTTCTGCTTAATAGTTTTCATTGTTAATTTGCTTAGCTCCAATGCATCAACTACTTGTGAAAGTTTATTGCCCATTAGTACAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:6820:2102 1:N:0:CGATGT\nGGACGACCCCGAGACATGGAATGTTCAGTTATTTAGATCCATTGATGGTGGTGCTGCTTTTGATTTTCCCGATACTCCTGAAAAAGCGGCCGAAGCTGGGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:6827:2143 1:N:0:CGATGT\nATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:6988:2214 1:N:0:CGATGT\nCATAGCGACTTGGTATACTGGCAAGACGAGTGTATAACAATTGCTTTGACAAGCGGTTACAAGTCTCAACAGTGGGTGGCTCTTGGATGAATTCCTTGTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:6905:2222 1:N:0:CGATGT\nGCTGCGAATAGCATAACCCATTTTTTTCCTTTTCCGGGTAAAATCCAAACCCTGATTCACTAATCGCATATCCATCCTAAAATAGAAACCCCCACCAAACC\n>D7DHSVN1:151:D12V0ACXX:8:1101:7033:2023 1:N:0:CGATGT\nTCACTTCTTTCGGGGCTAACAAACCCAGCTTTAACGTTCATGATGGCAGCAGATTGCATGAGAGAAGCTGGGCCGCCGGCTGGGGTCCGGCCCAAAACGGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:7103:2029 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAATATACAATCGTCAGATCTGGAAGGACCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:7218:2035 1:N:0:CGATGT\nCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATT\n>D7DHSVN1:151:D12V0ACXX:8:1101:7059:2090 1:N:0:CGATGT\nGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGATCTAAAGGATCGTTAGGCCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:7032:2090 1:N:0:CGATGT\nCATCATAATCCATAGTGGTTTCATTTATGTCCTTTCCATCTTGAATCACGTCTCCATCGAAATCTGGATCCGTCACTTCTGGATCTTCGTTAGGGTCAGTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:7104:2096 1:N:0:CGATGT\nGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:7036:2177 1:N:0:CGATGT\nTAAAAATTCATCATAACCAACATCCACATCAACTTTACATTTTTCGTTCGGATCCATCTCGTATAAAGCGAGATGGAGAGTAGAGAAGTGAATGAAGAAAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:7008:2181 1:N:0:CGATGT\nGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTAGAACAGAAGGGTAAAAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:7208:2190 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGCGAACGGCTCAAGGCGAAGCGGAAGCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:7014:2200 1:N:0:CGATGT\nCACCAAATGCGACAAATGCAAATTCTCCTCCAGGAGCCAGAAGAAGACCAGTTCTGATTGCAGATATTGTTGAAAGACCGAAAATTTTTCCAACTAAAGTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:7169:2228 1:N:0:CGATGT\nTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGCGTCCTAAAAGTAACAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:7428:2050 1:N:0:CGATGT\nAGCTTGAATCACCTCGCCTTCAATCCATTTTCGCGATCCATCAGGATTAACCTGAACATGACCAAAGAATCTAACAGGGAACACAACATCATGTCTTGCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:7312:2064 1:N:0:CGATGT\nCACTAATTCAAAGACTCATTTTTACAAATCATTCGATTTTAAGTGTTAAAAAAAAGCTCATCGTCTTCTTCAACCTTGACCTGATCCAAACTCGAATCGAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:7407:2064 1:N:0:CGATGT\nGGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTTCGGGCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:7273:2103 1:N:0:CGATGT\nAATTCACCAAGAAACTGTAGGAATCCTCAGCTACAAATTGATCATTTATGTTGGTGAAGTCAGAAGAAGTATTCGTGTAAGAGAAGCCTACTCCAATCGGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:7339:2104 1:N:0:CGATGT\nTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGTCACACC\n>D7DHSVN1:151:D12V0ACXX:8:1101:7347:2122 1:N:0:CGATGT\nATGCTCATCACCTCCAAGAGGAACCACCTAACCTAATCACCTCTTCTGCGCCGCTATCTTTGTTATACCCTCTTTCTGCACCGGCATCACCCTTCTGATCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:7337:2140 1:N:0:CGATGT\nCCCGGATTCTGACTTAGAGGCGTTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCGCTGGCTTTTCAACCAAGCGCGATGACCAATTGTGCGAATCAAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:7287:2141 1:N:0:CGATGT\nGGGGCCCGCAGGCCGACGCCTGGAGCGCGCAGGTGCCGTGGCACGCTGTAACAGCGCGCGCTGCCTACCACAATCGCGAGGACAGCACTCCCAGTGACTGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:7280:2183 1:N:0:CGATGT\nTTTGGATCTAGCTCGCCTGTTTTGGAACCAATTGTAGACATTTGTCTCAGAGATTTGGCCGTGTTGGGATAACTGGGCGGTGATTTCTTTGATCTTCTGCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:7447:2222 1:N:0:CGATGT\nGATCACTCCTTCACTCGAAATGAAGTCAAAACCCTATAGAACACAAATTATACCACAATCCGAGATTACATTCTCCCATTTTCCAACATACGCCAATTATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:7442:2243 1:N:0:CGATGT\nCTGGACATCTCTAACAGCAGCTTGCTCCACAATGTTCCTCACAAGGAACCTCTTGATTGCCTTGTCCTTAGGGCAACATTAGGCACAATTTGAACAACGGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:7666:2062 1:N:0:CGATGT\nAGTCCCTTGACCAGTCTCACCTTGTGTTCCATACGAAGGTTGGTTCCCACCAGCATAGCCAGCAGTGAACCCATAGCTTTGCTGATGATTGTACCCAGATT\n>D7DHSVN1:151:D12V0ACXX:8:1101:7566:2075 1:N:0:CGATGT\nGCATTTTGCTGAGGTTGAGAATGGGATATAGAGGGAGATTAAGAAGAGGGTTAGGATAAAGAGGGTGGAATTTGAGGGTTGTTTTGGAGTTTGCATAGTGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:7710:2082 1:N:0:CGATGT\nTTTGATTCCTTTGAACATTCTACTTTAGAGTCTTCCATTGATGACAATGTTGATGATCGTTTTACGACAGAAGAACGATTGGAAAAGGTGAGGTGGATAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:7526:2198 1:N:0:CGATGT\nTGATAAAAACATATATACGAGCTAAGAGCTAACTTATCCAAAAAAAAAAAATATTCCCCCAACCGTCTCTTCAAGAACCCAATCAAAGATTTAAGATCGGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:7907:2024 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAGAATCACCCAAGCAAGCGCAGACAGGAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:7910:2046 1:N:0:CGATGT\nGTCCCTGTTAATCATTACTCCGATCCACTTGTTACTTCTATCTACATGCTCCGCTCCGCCCCGCCCAAATTGCACTCCACACAGCCAGAGCAGTAAGGAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:7884:2079 1:N:0:CGATGT\nTCTCATTATATCTTACAATCAACTCACAACCGAGCAAAAGCCTTACCGCTCTCACTTCCCTTGCCAAGAAATGGGTAGTCAGTATATCCCACAACAGGATC\n>D7DHSVN1:151:D12V0ACXX:8:1101:7937:2130 1:N:0:CGATGT\nCTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGATCAGCACTCGGTCCTCCGGATTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:7876:2133 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAACAACAACTAGACCATAGCCACCACCATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:7991:2141 1:N:0:CGATGT\nCACCACCACTGGAATGTACCATTTTGCACAATTGTCAATAAATGTTTGGATTCTCGCCTTTCGACTCTGAGCCTCTTCTACAAGACTGACCATCCTCGCCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:7971:2185 1:N:0:CGATGT\nATGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGATCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:7957:2233 1:N:0:CGATGT\nGAAAAAAGCTAAGAGCTTCCCTTTTATTATTCTGAAAATTAAGTAATCAACAATAAATAGCAATGTTTCAATCGTTATTGTACCACAACTATAATGGCATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:8021:2004 1:N:0:CGATGT\nNCGAGATCTTGGGGGCAACACCGATGACAAGTGCGACGTTGGTGCTAGTTGACGCCTCTACCAAGTCTGGGTACATCTTGCACCCTCCGCAACCGGAGCCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:8181:2113 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGGAAAAACATCCAAGTCTCCAAGCGCATCACTACACCTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:8027:2118 1:N:0:CGATGT\nCCGGGCGTCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCTTGCGGATGTTAACGCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:8133:2124 1:N:0:CGATGT\nCTCTCGGTCTATTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTAATGATAAACGGCTCGTCTCGCCGTGACCTTTGCATTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:8130:2186 1:N:0:CGATGT\nGTTCCATCAACCTAGTATCATCTATATAAACCTCAGGCATCCATTGACTGCAAAACAAGTGAGCAAACTCAGCAGACTCATCACTTCCAGCACCTCCTATC\n>D7DHSVN1:151:D12V0ACXX:8:1101:8151:2219 1:N:0:CGATGT\nCGCCAATCATTATTTTTGTGGTGTAATCAATAAGAGAACAAGATCAGGAGAAAGAAGAAGATAAAACGCAAAAGTATATAAACAATGGCGTCCAATTCTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:8205:2230 1:N:0:CGATGT\nTATAAATCTAATTCTTAAGCATCAGCATATGTGCAAAGGTTCTCGAATCCCATATACTCGTGTCCTTGGATCTTGGCAACCATCTTAGAGATGCCTACTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:8113:2235 1:N:0:CGATGT\nCTATATATTTCACATATGAACGGTCTCTTCCCTGAACCTGAATGTACTTGCGGTTTAACTGTTCGAGCCAATCAATTTTCACTATGACCCTGTCATCAGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:8265:2028 1:N:0:CGATGT\nCAGTTTGCACGGCAACATTAATATTCACATTGTGATACTGGCGTATACAGTCATTGGTCCATGAACTGTTGCATTCCGGAACTTTCCTAAGAGCCAGAGCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:8485:2037 1:N:0:CGATGT\nGCGGAGAACTAAGACTCTGTTTGGTTTTGGGGAAAACATTTTTAATTGAAAATCAATTTCAAGTGCAAATAAAAATTAAAAATTTTCCTTTGTTTGGTTCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:8475:2058 1:N:0:CGATGT\nGCAGGCAATTTCTCGGATATTACCTTTATTTTTTAAAATTAGTATCTGGCACATTGGGTGATGCGAGTGCAGCCTCTGGAGTAACGATTAGCAGGAGAAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:8366:2081 1:N:0:CGATGT\nTGTTGCTCTGAGAGGGATACAAGATTGTTCCTCTTGATTTGGTTTATGCCTTCAACTGCTGCTGCTACTACGAATGCCCAACAACTTCCACATCTGCCTTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:8462:2162 1:N:0:CGATGT\nCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTTCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:8386:2173 1:N:0:CGATGT\nTCGAATTCACCAGAAAGATGCCTTTTCACAAATGTAGTTTTTCCTGTACCGCCATCACCGACAAGAACAAGCTTAAAACTCGGATAATTAACCGTTTGCTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:8451:2184 1:N:0:CGATGT\nGCGGCGGCGACGACGACACCGTGGTCCAAAGGCGAGAAATCTACGGCAATGGCCGTATTTACGACATATCTCATCGTTATCACCCTGATTTACCTGCATTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:8462:2214 1:N:0:CGATGT\nGTCCTACACATCTAAGGACAAATGGGGTGTGATGGTGTATTGTTAATAGTGCTGACAGGTTTTATTGTTGGAGTTGATCTATGTCCGTTGAGCTCGGCAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:8651:2005 1:N:0:CGATGT\nNGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAGAAGCAATAGACTACCTTCAGGGAGTCATG\n>D7DHSVN1:151:D12V0ACXX:8:1101:8713:2028 1:N:0:CGATGT\nTGAAAATGATCGAAAATTAACAAGATTTTGAATTATCTAAACAATTTAACTCAAACCTATGAAGGTAAAGATTTTCACGAGGATAAACCAAAACGATCGCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:8631:2087 1:N:0:CGATGT\nGCAATTACCAACAATATCTTCAATGATATGCATGTGAAGCCATATGCTTTCAGCCTGAGTCGACACAACTCCTCCTGGTCGAAGAGCTCTAGCAATAGACT\n>D7DHSVN1:151:D12V0ACXX:8:1101:8719:2196 1:N:0:CGATGT\nCTCCGCCTTACAGCCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGACGTCATCCCCACCTTCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:8512:2242 1:N:0:CGATGT\nCTATAATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAATTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:8971:2011 1:N:0:CGATGT\nCCAACGTTTCGTTTCCTCAGCCAACTTTTCTTTAGCCTTTTCCCAGAGTGTTTTAGCATCTCCTTTTTCAGGAAGAGAGTTGACATGAAGAAAGAACGGTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:8897:2016 1:N:0:CGATGT\nTAGAGGGAAAAAAGAATGGCAAACTCCTCTTTAAGAGGTTCACCCATTCTCTTTTAGCAGAATCAGCATTTAACTTCCTTGAGACCATGGGCAAAGTACAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:8795:2075 1:N:0:CGATGT\nCTTTAAATACGCCAAGGAACATGGAAGAGAGAGGGTGTCTGCAATACACAAAGCAAATATCATGCAGAAAACTGATGGTCTTTTTCTCAAGTGCTGCAGGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:8970:2106 1:N:0:CGATGT\nGGCGAGAGTAACGAATAGGAACAACCTTAACATCATCAAGAACAGGACCACACATGGATCCTTGAACAGTCATGGTATAGAAGGAGCTGATGAATCCGATC\n>D7DHSVN1:151:D12V0ACXX:8:1101:8775:2126 1:N:0:CGATGT\nTTTGCGTTACTCAAGCCGACATTCTCGCTTCCGCTTCGTCTACCACGGCTCGCGCCGGTACTTCTCTCTAAGGCGGAACGCCCCCCTACCCATGTTTTTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:8881:2169 1:N:0:CGATGT\nCTAATTCTCTGTCACCCGTCACCACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCATCGCCAGCGCAAAGGCCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:8934:2192 1:N:0:CGATGT\nCAGCCGCTAGACCCTACCTCCGGCTGACCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACATCTCCGGAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:8802:2207 1:N:0:CGATGT\nATAGAATCCCGAAGTGATGCTGGAAGTGGCACGACATCTGGTGGTACGTATCTTACAATTAGAAGGGATATCGCTACTGTCGTAAATGCCAATAGTGTACC\n>D7DHSVN1:151:D12V0ACXX:8:1101:8937:2238 1:N:0:CGATGT\nGTAAAAGAGAATGCCTTTATTCAAAGCATGAGCATAATCATGATCAGCCGTAGTGAATGGAATCCCACAAAGTAGCATAGTAAGAAACAAGGGTGCCATAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:9059:2004 1:N:0:CGATGT\nNTAAACTTTTAATTGAACACTTGGTATGCATGTTTATCATCCTACATTAATTCAAATTAACTCCCTCAAATACTAACAAAGCTAATGTTTCACAATCATTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:9148:2013 1:N:0:CGATGT\nGCTTCATATGGTACACATTTATCTGGACATCTCATTCAAAGATTTATTTGCAAAAGAAAGACTACTACTAATCAAACTACAACGACTAGACAGACTAATAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:9019:2072 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAATGACAATTGACCTAGTATAAGAAAACCACGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:9113:2084 1:N:0:CGATGT\nTTAAAGTATTAACTAATAGAGGAGTAATATTAGACAACCCGTCTTTTCTCTTTTTTTTTTCACAAATAGGAAATTTTGAATCCAATTCAGATATCAGAAGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:9080:2092 1:N:0:CGATGT\nTGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGCTTGGGGCTGCATTCCCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:9030:2107 1:N:0:CGATGT\nCGGGTCGAATGGGGGGCCCACTGGCCGACGCCTGGAGCGCGCAGGTGCCGAGGCACGCTGTGACAGCGCGCGCTGACTACCACAATCGCGAGGACAGCACT\n>D7DHSVN1:151:D12V0ACXX:8:1101:9052:2137 1:N:0:CGATGT\nATAAAGTATAGGCCGCCTGAGAAAACAGCAACGAAAGATTCTATAACTAAAAATATAAAATAAAAAATGACGACGTCTACTCGAGCGACGACCTTCCTAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:9064:2188 1:N:0:CGATGT\nGGAAGAACTAGAAGATTCCACCTCTGGAAAGCGCCTACACCTAATGGCTTAAGCCGCTGTTCCCATTTCCTCGCTGACCCATCATGCAAAAGGTACGCCGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:9174:2191 1:N:0:CGATGT\nGGCATAATACATGGATCATGGTCAAGCAAGTGGCGACCTCATCAACCGTAACACGCTCAGGCTGCAGCATAGATATCACACGGGGATCATAAGTAGGAAGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:9080:2243 1:N:0:CGATGT\nCTCAGGTGGAATTTCTCTGACAACGCCGAGCATGGAGTCATATTCCTCATCTTTACGTGCGTATTTCTTCCTGAGAGCCTTCTCGAATTCAATCTCATCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:9497:2005 1:N:0:CGATGT\nNCACTCATCACTAAGATAGCCAATGGTGAAGACAACAAATAACTACATAGCCGCTTTTGTTCACAATGATGAAGAAACAATAACATAGCAGTCAAGTTGAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:9403:2025 1:N:0:CGATGT\nCATCGATCACTATACATTTCAAAACCATTCTCACATAACACAACGAAAAATCAGGAATGATACAAAAGAGAAAATGTGCATTATAGAGAGTTCAACGAACC\n>D7DHSVN1:151:D12V0ACXX:8:1101:9301:2041 1:N:0:CGATGT\nCTTTTTTCTGTAACTGCACAAAAATAGCTAATACACCAACATAATTTCTCTATGTATAAACCATATGTAGAACAAGTTTAACAAGTGACCTTCCATTGCTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:9358:2074 1:N:0:CGATGT\nCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:9406:2075 1:N:0:CGATGT\nCACAACTTAGCCCTTATTTTTCAGTATCTGTTGTAGAAACCCGTATCAACCTGCACATCTTCCCCGATTTTAAGCGAAGAAAAAGCTTGTGCAGCAATAAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:9408:2130 1:N:0:CGATGT\nCAGTTTAGAGTGACATGACGCACCGTGCGCCCGTTGTACATTAGAATTTGCCATATAAAAAAAGAAAAAAAGGCTTGGGACACACAAAAAAGGCCAGGTAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:9373:2154 1:N:0:CGATGT\nTCGACGGATCGCACGGCCTTTGCGCTGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTGACGGGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:9439:2167 1:N:0:CGATGT\nGAACCGTCTTTATTAAAATACAACTCCTTGGCCATGGCATTGGTGTTTGTGGAGCGTGGTTTTCTGAAAGCCACATTTTGTCTTCTGGTGGAAGAAATGGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:9454:2181 1:N:0:CGATGT\nGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGCTTGGGGCTGCATTCCCAAACAACCCGACTCGGCGACAGCGCCTCATGGTGCGACAGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:9482:2191 1:N:0:CGATGT\nCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:9269:2205 1:N:0:CGATGT\nCGCCGGCAGAAGGAGCAAGACGACCGGTGCACACCGAAAGGCGGACCGGTCGGCCCACCCCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:9310:2208 1:N:0:CGATGT\nGTCCAGTTGTCATTTCAGATTTGAGTTCTCATCGAGGTCCTTACAAGTGGTGTCGGCTGCGAACACCAGCACCCTGCCTGACGCGTCCGCTGGCCTCGTTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:9274:2238 1:N:0:CGATGT\nTAAGGGTAGATTGGTCATATCCCATTGAGGATTTTATTTCATTTGAGAAAAGACCGAACAAGTAGGCTGCTCCTGCTACTGACATTATCAATAGCGAGGCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:9542:2010 1:N:0:CGATGT\nCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:9697:2022 1:N:0:CGATGT\nTGAAGATAAATTAAAGGAAAGTCAAGCTGTTGTTCGTACTTACCTTCAGAATTTCCATCTGGAAAAAAAATGAGTCTTCTGTTTCTTTTTTCAAATTCATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:9543:2051 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAGAGTAATGAAAACATCCTTGGCCAATGCTTTCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:9599:2055 1:N:0:CGATGT\nGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:9539:2070 1:N:0:CGATGT\nTGGGGGAGTTACAGTTAGCTATTTTGAGTGGGTTCAGAACATCCAAGGGTTCATGTGGGATGAGGAGAGAGTGAACACAGAGCTGAAGACATATATGACTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:9735:2074 1:N:0:CGATGT\nTTCCATAGATTATAGTTGAACTGTGAAGACTTGACAAAGTCATGCCGGTAGAAATAGTACTCGACTTACCGATAAATTAGGCAAAAATATCACTCCCTCAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:9674:2091 1:N:0:CGATGT\nGGCACGTGCCCTTGGGGGACTAATCCCCTACTGCAGGTCGGCAATCGGGCGGCGGGCACACGCGTCACTTCTGGCCCGGATTCTGACTTAGAGGCGTTCAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:9643:2096 1:N:0:CGATGT\nCCGGTCAGGGTCTTCACAAAGATCTGCATCCCACCCCTCAGACGAAGGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCGGCCAGGGTCCTTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:9737:2103 1:N:0:CGATGT\nGATTTAATCTGCGAATTAATTTGTCATAATATTCATCATCCATAACTAAAATATTTACAAAAAAAATAAAAAGAAAAAGAATTATATTTATTTTGGGTAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:9520:2118 1:N:0:CGATGT\nTAGGAGCAAAAGGAGACCAATTTGATACATCAACTTCAAAAGCACCAGCAATAATTACAACGAGGACAATGACTATCTTAGTTACAGTCATGAATGAATTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:9583:2142 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAATAAAGAAGTGGCGAGCAGGACGGGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:9715:2144 1:N:0:CGATGT\nCCGCTATTTTGCCTCTTGGCTTCGAAAGCAGCCCCGTCGTTGAGCATGTCCTGAGCATCGGCTTCCATCCCTAGTTTGGATAGTGCCAGAGCCTGCAAATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:9521:2161 1:N:0:CGATGT\nATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:9881:2029 1:N:0:CGATGT\nCTACTTTTTAATATGTTCTTCACCTCCATTCAACTACAAATCTCTATAGAACTCTTATTCCATGAATCCATAAACCGTTTATGAAGATCATCACAATAAAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:9898:2074 1:N:0:CGATGT\nCGGATTTGGACCGTTCCGCATCCGACCGAGGCGCATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:9837:2076 1:N:0:CGATGT\nGCGGCACTTTCCCTCTCTTGTTTTCGCAAAAACGGTCCAACATAAACTTGCTTATCATTCAAAAGCATACCATTAAGTTTCTCTATAGCCTTCTGGGCAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:9927:2116 1:N:0:CGATGT\nCCTGCTGCTAACCCGTATTGTGTTGCATTTGCCCTTCGAATAACTTCATCGAGGTCCCTGAATTTCAAGATAGATTGAACGGGGCCAAAGATCTCGTCCTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:9811:2118 1:N:0:CGATGT\nTTTTTTTTTAAATAGAAAGGAAACAAGTGATATTATAAGTCCAAATAAGATTTAAAATACAGCATAATAATATAGAACTAGCACAAAATACAAGACTCGCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:9841:2161 1:N:0:CGATGT\nGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTAGAACAGAAGGGTAAAAGCTCGTTTGATTCTGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:9932:2188 1:N:0:CGATGT\nGCAGATGTAACAGGATCAGAGAAATCTCCTCCAGGAGGGGAAACAGCACCAACAATGGTGACACTGCCATTGCGTTCAGGACCACCAAGACACTTCACTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:9869:2218 1:N:0:CGATGT\nCCGACCCTTTTAACAAAACCCGGGTCAGCCCGTGAGTAGAACCCGGCATTGACAGCAGACCCACCACCGAGAACCCGAGCACGAGCATTGGCAACCCCATC\n>D7DHSVN1:151:D12V0ACXX:8:1101:9761:2221 1:N:0:CGATGT\nTTCCCACATTCTTAAAACCCCACCACCACCACCACGGCCGCCGCCGCCGCCGCTTTCTACATATTCATCATCATCATCATCATCTTCATTATCCAACATTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:9996:2244 1:N:0:CGATGT\nCTGAGAATTAGATAATTCCCTTGGCCTCCGTAAATTCATGGACTGAGAACGTCTAAGAGATCCATTTTGGAGCCTTTCAACCATTAAGCTAGTCACAGAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:10086:2003 1:N:0:CGATGT\nNCTGATGGAACACAAGGCTGTTTTAGTTGGTCTGCATTGCTTCTGAGTGATAATTGTCTAATTCAGCATCTAACTGCTCAGCTGATACCACCTTCTCGCCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:10207:2005 1:N:0:CGATGT\nNTTCGCTTTCAAGCGTGAAAGTCCAAAATCACACACCTTCACAGTGTACTTTTTATCAACCAAAAGATTTGGAGACTTGAGATCGCGATGAACGATGGGTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:10080:2078 1:N:0:CGATGT\nTTCACAATGTCACTAACCTTATCAACCGTGTCTGGCTTTGCAGCACAAGAGATCTGCAAGCGAAGAGGCATCCAGAGCTTTGGGGTGCTAGTCCTCAAGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:10029:2185 1:N:0:CGATGT\nTTCCTCTTTTATATGCATGCCTCTCTTTGCAAATGTTCCGACATGATAATACGTTAAGTCCCAAATCGCTTGGGTTGAATTCCTTCAACAAGCATTGTCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:10065:2189 1:N:0:CGATGT\nAGCATTTACGAGCGGTGATTATGGACAAAAATAAGTTACTCAGCTATATATCAAACACTATAAAATTGTTACATCTCCTACAACTTACACAAGTAAATTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:10026:2209 1:N:0:CGATGT\nTCCCTTCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATGGTGTCTGAGCTCTCAACCTCAAGGGTGATGGTCTTCCCAGTCAGGGTCTTCACAAAGATC\n>D7DHSVN1:151:D12V0ACXX:8:1101:10065:2216 1:N:0:CGATGT\nTTTCCGAAGATCTAAAGGATCGTTAGGCCACGCTTTCACGGTTCGTATTCGTACTGAAAATCAGAATCAAACGAGCTTTTACCCTTCTGTTCTACACGAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:10157:2234 1:N:0:CGATGT\nGTCGCCAGCGCAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACAGGCAAAGCCCGCATCGACCTTTTATCTAATAAATGCATCCCTTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:10215:2236 1:N:0:CGATGT\nCGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCATTGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:10438:2004 1:N:0:CGATGT\nNGTGACACTGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAATCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:10485:2005 1:N:0:CGATGT\nNAGGGTTTTGAGCTTGGTTAGTTCAACTTTGAGGGTCGAACAAGGGTCTTTGACTGGTGAGAGTGAAGCTGTTAGTAAGACTGTTAAGCCTGTTGCTGAAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:10408:2017 1:N:0:CGATGT\nGCCGAAAAGAACAATGCTCCGGTATAAATTGAGCCATCCGATACTTGGTCCTTGTGCATCCTTGTTCGAAAGAACACAGTCATTGCTATGAGAGCCATTAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:10388:2097 1:N:0:CGATGT\nGCATAGGCTATCATCCGATCGTAGTAGACCCCGATTCTTTTGTTGGGGTTGTGGGTTTGGAGAGTGACTTGGAAGAGTGACGTCAGCTGGGTTGTACCACT\n>D7DHSVN1:151:D12V0ACXX:8:1101:10476:2103 1:N:0:CGATGT\nGGACTGAAAGATGGTTCGGGTGTCATATGCTCCTTGTGTAACAAACTTCCTCTCGAATTTGTCCAAGAACTCCAAGTATAACAGATCTTCGGAAGAAAGTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:10423:2118 1:N:0:CGATGT\nACTGAATCTCCTACCAATCAACCTCTTTGCATCAAAGACAGTGTTGATAGGGTTCATAGCGACTTGATTCTTGGCCGCATCGCCGATGAGACGTTCGGTGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:10612:2008 1:N:0:CGATGT\nTCAGATCATCAATTACAATAGCTCGTTCTCCTGCTTCCACGGCACCAACATGCATCTCCATTTTATCGGTTCCATATTCCAATGTTTACTCTTCCGAAATT\n>D7DHSVN1:151:D12V0ACXX:8:1101:10664:2055 1:N:0:CGATGT\nCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:10721:2059 1:N:0:CGATGT\nCCCGAGGCCCCCGCCGACATCTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGATGCTCGCGCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:10594:2091 1:N:0:CGATGT\nCTTCCGTGGCCTAGAAGGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:10726:2093 1:N:0:CGATGT\nAGGCCATTGACTCTCATGTTTAGCAATACAGAATCAAGCATCTTCCCCCCGACGTTCTCGAAATAAATGTCAATCCCATCTGGAAAGTACCTCCTCAAGGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:10635:2169 1:N:0:CGATGT\nCTTGAAGAGAAGCAGAATGTAAAAACTCAAGGTACTTCAATCTCTGCTCCTCATTGCTTTCCACCAATTGATCTTCAACTCTGGAGTTAATTTCCGCCATC\n>D7DHSVN1:151:D12V0ACXX:8:1101:10631:2229 1:N:0:CGATGT\nCCAGCCAAGCTGTACCTGCTGCATGTTCAGTCGTCACAATGGCTATCATGGGACTTACTATCGCCTCCTTCTGGGGCACTGGTCGTCGCATCAGAGATCTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:10742:2236 1:N:0:CGATGT\nTCCCCATGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCATTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:10719:2244 1:N:0:CGATGT\nCGCCGCTAGGAGGCATACACAGATTGACATTCCGCCGAGATACCATGGCACCTTGGATAGCAAGCCGTTGACAAGATGTTGAATGGAGCTAATGGGTGATG\n>D7DHSVN1:151:D12V0ACXX:8:1101:10958:2023 1:N:0:CGATGT\nGCATAATACAATTGACAGCATCATCACCACTGAACTCCTCAGACCATGCAACAAGGCTAGGCATCATGTCCTGATCAAGCAACCGCCAATTCTTGAGCTTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:10876:2040 1:N:0:CGATGT\nCCATCCTCACAAACCACATTATCATTACCTCCATCTGATCCAAACATCGCAATTGGACTACCATCCAACTTCTTAGGCATAATCATCTCAAAACGATTCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:10945:2062 1:N:0:CGATGT\nCCCGACCCCATGGTTAACTACTTGGAAGAACCCCCACTCTTTGCAGGCCTTAGCAATCTGGTCCATGGTTGACCTGACCATGTTCAGGTTGCTAGAGGACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:10889:2112 1:N:0:CGATGT\nCATGCTTCAACGATATCGACGAGACAAACGAATGACCAGGACGAGAACTACCGGAATCAATACCGGCCGCATTTTTCAAGTACCAGGCAACAGAAGGGGGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:10841:2112 1:N:0:CGATGT\nCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGTATGCTCTCACTCGAACCCTTCACTGAAGATCAAGGTCGGTCGGCGGTGCACCCACAGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:10822:2116 1:N:0:CGATGT\nATGATTTTGTCTCAAGCGTACGAACTATCTCACCATTTCTTATGTCCCATAACCTCACTCCGCCGATGTCACTACAAGAACTCAATATAGTTTGATCACTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:10958:2116 1:N:0:CGATGT\nGTTCGATTCCATTGATACAAAACTCTCTACCAACCGCACCCGATCTTGCCACACTTTCCGAACCATTTCGAGGTACTTTTCGTTATTCTCCATGTCGCCGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:10782:2120 1:N:0:CGATGT\nCGCCAACTTGCGTTTACTGCAACGAAGAATTTGTCGAGTTTTGGAGCGTTGTTGAGCATCAAAGTTGTAGCTACAAAATCAATGAAATAGCAGCATGCATT\n>D7DHSVN1:151:D12V0ACXX:8:1101:10879:2146 1:N:0:CGATGT\nGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACTCGAAGAGCCCGGTATTGTTAGATC\n>D7DHSVN1:151:D12V0ACXX:8:1101:10759:2146 1:N:0:CGATGT\nCTGTTTGGTCCTCCGGGAACTGGAAAAACTCTTCTTGCTAAAGCACTTGCGACTGAAGCTGGAGCGAATTTCATCAACATAACCGGTTCCACGCTGACATC\n>D7DHSVN1:151:D12V0ACXX:8:1101:10756:2207 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAACCACTACGTGAAAGCGTGCCCATCCTTGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:10769:2236 1:N:0:CGATAT\nCGCAATTCTCACCTCCGTCCTCGTTGCCGGAAACTCTCCGATTCTTCCACTTCCGGCCCCACTCCGATGACTCCCAATGGCTCAAGAGAAAAAGATTTCGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:11156:2085 1:N:0:CGATGT\nCTTCTGTTTAGGAACTGACGTGGGCCATCGTTGACCCAAAACCCAGACCATGCTTTTATGTAATTCAGTTGCAGATCTTTGGTTGTGAGGTTCAAGATTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:11128:2137 1:N:0:CGATGT\nCTGGTGAAGGGTTCGCTTATGTTGGACAACTCGAGTTCTTCATCAGAGAAGCACCTGAGAAGATGAAATCAATGAGCACAGGATTTTTCCTAAGCACATTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:11032:2199 1:N:0:CGATGT\nAGCGGTTTGAATAGTCATATGAAGAGATCCAGTAATCTTAGCCCCTTTGAAAGGTTGAGAGGGTCCGAACTCAGTTCGGCACGCCATTAAACCGGGCATTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:11106:2222 1:N:0:CGATGT\nGCAGAAACACATGATCCCATACCTAGATATAACAACACCCTCTTCATAATGCTTCTTTAACTTGGAGATGTTAATAATTAGCTTTAGATATTATTTTTTTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:11405:2026 1:N:0:CGATGT\nGAAGTTTCCTCGATACTTCATTGCTAGATTCATTAACATGGGTTAAATAGTTCTCAAGAGCAACAAGCAAGCTTTCACAATATTGCTTGATCTCACTCCTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:11478:2036 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAACAACAAAGTAGTCCCTATGTAATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:11337:2049 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAATCTCATATAAAGACACACAGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:11374:2059 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTACCTCGCATGCCGTCTTCTCCTTGTGAAAAAATCCTTCACTTCATCTTCAAGCAGAAACCTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:11403:2076 1:N:0:CGATGT\nCCATGTCAGTCCGCACCCCGAGCCGATCGGCGGACCGGATTTAGGCCGTTCCGCATCCGACCGAGGCACATCGCCGGCCCCCATTCGCTTCCCTCCCGACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:11319:2143 1:N:0:CGATGT\nCTGCCGCCTCCTTTGGGAGCTTCTTCCCGGCTTTTGGCTTCTTCTCCGCCGGTGCTTTCTCGGCGGCGGCGGCGGCTTTCTCGGCGGGGTTCTTTTTTTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:11722:2004 1:N:0:CGATGT\nNCAGCATTCACATCTTTAGGGACAACATCACCACGGTACATCAGACAGCAAGCCATGTACTTGCCATGGCGAGGATCACACTTGGCCATCATAGAGGATGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:11614:2037 1:N:0:CGATGT\nACTTCTGAAGACAAGACTACTACTCCACTAGACACGGCATTTGGCTTATCAAAGAATCCCAGTCCTGTGTGCGACTCCTCATCTTCATCCATGACACCAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:11701:2043 1:N:0:CGATGT\nCCGGGCGTCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCTTGCGGATGTTAACGCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:11509:2065 1:N:0:CGATGT\nGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGGTCATCCCCCCTCCCCCGGGCTCCTTTCCAAAAAAGGCCCCCGCCGCCCCCCCCGTTCCTGGGGACTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:11628:2075 1:N:0:CGATGT\nCGTCACAAATCCTCCAAACAAACACAACCACTTTGAAACTTAACCAACCAACAAACCACGAATCAACTTCACCAACACAATCTCAATTACAACTCTATCAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:11616:2101 1:N:0:CGATGT\nCTCGGGAATATTCCGCCATAGTTAAGGCAGTCAACCCAACTCTCATACGTGCCCCCGGCGGTTCATTCATTTGACCATAGACTAGAGCTACTTTTGATTCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:11743:2106 1:N:0:CGATGT\nCCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCAATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGATCGACTAACCCATGTGCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:11520:2106 1:N:0:CGATGT\nAGGAGAGAGAAACACTTTCGATTAATTAAAAATCAAATCAATTAATTAAAACCAGAACTCAAATCCCATTCTTTTTAATTTAATTTAATTTAATTAAATGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:11603:2193 1:N:0:CGATGT\nTCTTAGCTTTAACCTTCAAATGCTTTTCCAATATACTCACAAGTGACGGCACCGTTACAGGTTGCGTATTACCCAAGTTATATATCCTATACGGTGCGGGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:11509:2212 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAATACTATGCTACAATGTTTGCCGGCAGAGAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:11942:2140 1:N:0:CGATGT\nCTCAAATCAACACCATGATTAGGAGAACGCGTTCAGACCGATTTGAATGATAAGATTTTCATGGTTACAACCGAATCAGGGTTATTAAAATGGCCATAACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:11958:2165 1:N:0:CGATGT\nCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:11924:2172 1:N:0:CGATGT\nTTGGCAATAGCTTTGAGTGACTCAAAGAAGTAGGTAGATTCCCGAATGATTGCATACCCATTGGGACGTAGGATTCGATCCATTTCCAACAGAACATACTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:11836:2197 1:N:0:CGATGT\nGTGTTGTTTGGGTGGGATGGGGAAAAAAAATGATGGGTGAATTTTTTTTTAGGGAAGATATGGAGACGAGGAAAACAAGGGCGGCGATGGAACCGGGGAGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:11909:2198 1:N:0:CGATGT\nGGGCACTTCATCTTTTGCTCTAAACATCAAACCAACCCAACACCTTCACCTTCCTCCACCTATTTTTTATTTTTCCATTAAAATCCCAGTTTTTTCATCTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:11913:2230 1:N:0:CGATGT\nCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGTTAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:11830:2231 1:N:0:CGATGT\nCCAAGAAGTCACACATGCTCCAAACAGATATATCTCAGCTTCACTACCATGAGGCGAAGTGAGGACAACCTTAGGAAGATCTCCAAGTCCTTCAGTCAACT\n>D7DHSVN1:151:D12V0ACXX:8:1101:11967:2238 1:N:0:CGATGT\nCTCCGTACCAGTTCTGAGTCGACTGTTCGACGCCCGGGGAAGGCCCCAAAAGGAGCCGTTCCCAGTCCGTCCCCCGGCCGGCACGCAGCAACCCGCCCTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:12221:2045 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCCTATGCCGTCTTCTGCTTGGAAAAAATATTAAACTAGTCAAATAGGACTCTCCCCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:12071:2064 1:N:0:CGATGT\nGGCATAGTCCAATGAGTAGACAAAAAACAATGAAGAAGCACCAGCAGCACCACCAGAAGCCAAGTTACCAGCGAACCACACCCAGTAACCATCCTTGTCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:12090:2189 1:N:0:CGATGT\nCTGATTAAGTAAGAAAAAATAACGGATATTTTTTCCAATATAAAAACAAAACTTATTAATAAAAATTATGGAAGTCGGGCGAACAAGAATGTCCATCTCGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:12221:2196 1:N:0:CGATGT\nCGTCACCCTCCCGGAAGATGACGTCACCATCGTTTTCGCGATTGTGGCAGCTTGCTCCGCCTTCAACCGAGCATCGCGGAAGCATTTGGAGCAAAGATTCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:12186:2247 1:N:0:CGATGT\nGTGCGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACCATTGTGACACTGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:12449:2002 1:N:0:CGATGT\nNGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAACCCGGCCAATTAAGGCCAGGAGGCCATCGCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:12350:2078 1:N:0:CGATGT\nTGGGGGGGTGAGTAACGCGAACAATGGACGGAAGTTGACGGTACTCCCAGCATCGTACACGTTGAATGAACCTCATGACGTCAGATTGCTTCTTCCTCCAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:12288:2099 1:N:0:CGATGT\nCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAACTAAGGCCAGGAGCGTATCGCCGGCAGAAGGAGCAAGACGACCGGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:12320:2102 1:N:0:CGATGT\nCCACGAGATAGTTCGAGTATCATATCCACAAATCCTCCACCACCTGCTTCTCTAAAAATCAATTACTTCAACTCACAGAAAAGAAATTAAGGAATCCAAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:12496:2126 1:N:0:CGATGT\nCTCGATTATCTCAAAATCAGACCTGTAGAACGTTCTCAGGTTCCCCCCCGCGAGTAACACCGTCAGGTATGCCTCGAATGCCGCTTTCATCGCTTCTTTGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:12319:2130 1:N:0:CGATGT\nCGATCAAATTTCACAGCTATCCCTCGCATCACAACATGCTTCACCCTCCGTAGTGTTTAACAATTAAATCACCTGATGAAAATCAAGCACCTGTTTGTTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:12439:2208 1:N:0:CGATGT\nCGCCGAGCTATTCTTTTCAGGTTCTTTTATTTCGCCTGTAAGGTATTCATCCTTCCCTCGCCCACATATGGACATCATGACTGATTATGACCACCGAAGAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:12543:2072 1:N:0:CGATGT\nCATCATTCAACAAATAAAGTGATTCTGAGTAGAAAATTAAATTCTTTTTAAAAGGACAGATATACAAAGCATCACTCACCTACATCTTTTCCTTTTCATTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:12656:2084 1:N:0:CGATGT\nTTCTGTTCTACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:12576:2091 1:N:0:CGATGT\nATCCGCTTCCATCCCTAGTTTGGAAAGTGCCAGAGCCTGCAAATAAAAGGCGATCGGCCATTCGGGTATGCAGGCACAGGGCTGCATACCCGAATGGCCCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:12504:2100 1:N:0:CGATGT\nTCCGGTTTTTTGTTCTTTTGACCCTCGTTTGGTTTTTATCGTGCATTCAAGGCTATGGTTTTGTAGTGCTGTGGATTTTTATCCACAAGTAATATCTTGGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:12587:2185 1:N:0:CGATGT\nAACCAGCCAAATTTGGTGCCAAGTTCTATAGAAGCTTGCTATATGTTCTCTCTAGTTTTTCAAATTATTCAAAACCACCGACACATTCAATGGATGAACCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:12502:2233 1:N:0:CGATGT\nTGTGAAACCGGCGCTAAACCATTAGATACTTCTGTAGGGAATGTCTTCATAAATCCGGCTTCTATATCGCAGAAATCTACTTGAGCGATCGATGGAATTTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:12696:2247 1:N:0:CGATGT\nTGACTCTGCTGGTGGATAATCCTCTGCCAAAGGCTTTTTGACAGAAAAGTCTCTACCCTGTCTGTCCTGATTAAGAGGAACATCCCTCATGTCATTGGAAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:12855:2049 1:N:0:CGATGT\nGGGGGCATCTCACCGGCAACCCACGGTGTCGAACCCATCAAGCGACGGCGGCCGGGGGCCACATTACCTGAAGAACCAGCACCACCACCACCAGCGGCGGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:12826:2071 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAATCCTGTTGAGCAGTTGATCCCAAGATGCCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:12846:2088 1:N:0:CGATGT\nCGTCGCGATAATTGTGCTAGTAGCTTCTCGAAATCATCCTTGTATCATTACATGCGATGGTTCCTGGTATCTCCGCTGTAGAGCCAGTCATAAACAGTGGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:12947:2106 1:N:0:CGATGT\nCGCCTCTCTCTGTTCTGCATTTGAGTAGAAGAAACCTGCATTTATTTCACTTTTCTCATACTCAAGAGACACATTGCAAGTCAATATGTAACAATTTTCTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:12806:2200 1:N:0:CGATGT\nCCTTCCTTGACACGGAAAGCAGGTGAGACGTGGGCAGGGATGTTAGAGTGCCTCTTCTCATATCTTTGATACTTTTTAATGTAGTGCAGATAGTTGCGGCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:12805:2220 1:N:0:CGATGT\nCATACATTACTTATGCTGAAGAATCTACAATAAAGGGTTGTTGATATAGTAATTATCTATGATAAGAACAAAGGCGCATAACGCGCAATCACAAAACATAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:12975:2239 1:N:0:CGATGT\nTTACCCTGTTAAGTGTAACCAAGATAAGTCCACCCAAATTTAACAATATCATCAACAATCAACTTATCTTGGTTACACTTAACAGGGTAAACACCCTGGTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:13150:2015 1:N:0:CGATGT\nCACCCGCATGTATCATCCACACCGATACTTATTCCCATTTTTTAACCAAACAAGGCCTTAGTCACCTCCAAGAACAATAAGTACGTGATCCATTGTGGTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:13177:2059 1:N:0:CGATGT\nAGGAAGTTCAAGAGACTCTGCCACCTTCTCGAGTGCCAAACATCTAATTTCCCCAAGCTCCTGTCTACATGTGGGGCATCTGTTATGAACCCTTGTTTTAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:13105:2163 1:N:0:CGATGT\nGCCGGCTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGATCAGCACTCGGTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:13085:2227 1:N:0:CGATGT\nCGGCTGGTGTGGACTCTAAGGCTGGGCTTATTCATCGTACCAAGTGTTCTATTGGCTTTACTTATTCGTTTTACAAGTTTACTTCCTCGACCTAAGTTATT\n>D7DHSVN1:151:D12V0ACXX:8:1101:13313:2014 1:N:0:CGATGT\nGGCGAAGGCACTGACGTCAAGGCCGGGGATGTTGAGCGTCATGAGGATGCTCTTAACACCCGTGATAATGTTGAGTGCATTGCTAGTTAATTCCCTTGAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:13325:2028 1:N:0:CGATGT\nCCCGATTCCCTTTCGATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACC\n>D7DHSVN1:151:D12V0ACXX:8:1101:13304:2034 1:N:0:CGATGT\nCAAGTAAGACTCTCCTTTTTACCTACAACCTCGAAGAGGGTATCCTCCACGGTATAGTGGAAATTGGGTACATCCAAACGGGGCAGATCCTCTGTAAAGGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:13467:2042 1:N:0:CGATGT\nCCCAGCTTTTGGCAAATTTTGAAGCTCAAGTCTCTGTCAACCATCTTACTGCTCCTCGGACCGCCACTGTTCGAAGTTATAGCTGGACCATCTAACAAAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:13267:2114 1:N:0:CGATGT\nTGATGGTCTTTCCAGTTAGAGTCTTAACGAAGATTTGCATTCCTCCCCTAAGACGGAGCACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCAGCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:13385:2137 1:N:0:CGATGT\nGTTAGTGTCATCTTTACCCATGAGCTTTTGATACCCAAGAGCTGAGGAATTATACAGAGGCATGCTTCGCATTGTACCATCCAAAACTGTGACACCAATAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:13260:2140 1:N:0:CGATGT\nCTCATCTTGAATAGCTAGTAATCAGAGAAATGAAAGTGAGAGAGAAACCGAACCAGGGAAGTGGGAGAGGAATAGAACCTCATCTTGAATAGCTAGTAATC\n>D7DHSVN1:151:D12V0ACXX:8:1101:13418:2147 1:N:0:CGATGT\nCTTGTCAATGCTGGTTGCCAGCTCTTTCTTCGCCTTCTCCAGCCCAGCCCTCTCAAATTCATTTAACGGGCCAAGCGGGAAAATCTCTTCAGCTCCACTAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:13457:2228 1:N:0:CGATGT\nACCAAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACCATTGTGACACTGTCATCAGTAGGGTAAAACTAACCTGTCTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:13437:2233 1:N:0:CGATGT\nGCCCAGGGTGGGGAAGAAATTCCAGATACAGTTCCCTTGGAAGATGACGAGTCCTTAGGGGGACTTCCAGGAGTATTGCCTGTGGGGCGAGGCATGTCAAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:13285:2243 1:N:0:CGATGT\nATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCGAATGGGGGCCGGCGATGGGCCTCGGTCGGATGCGGAACGGCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:13331:2247 1:N:0:CGATGT\nCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCAAGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:13728:2069 1:N:0:CGATGT\nCTCCGGGTTATTCTTATACCCATTTGTCACATTCGGGCCACGAATACAAACCTCCCCTTTCAACCCAGGCCCAAGAACAGTCCCATTCTCATCAAAGATGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:13531:2075 1:N:0:CGATGT\nCGGTAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGTTAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:13581:2091 1:N:0:CGATGT\nCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTGTAAGTTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:13556:2115 1:N:0:CGATGT\nGCGGATTCTATAGCGTAGAAGATTCTAGAAGCTAAATCAGAAGATCTCTGCCATGCAGCGAGTCGCGGTAGGAGGCTGGATTCGCTACTATGGCTGACCAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:13578:2117 1:N:0:CGATGT\nTCCCCTCGGCAAGGTGCCCCAGCTTTGATGAGACCAGTAGCAAGACCCACCGAGAAATCCGCAATGAAAGTGTCCTCAGTTTCACCACTCCGATGTGATAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:13622:2141 1:N:0:CGATGT\nACCGAAGCGACAAAGGGCTGAATCTCAGTGGATCGTGGCAGCAAGGCCACTCTGCCACTTACAATACCCCGTCGCATATTTAAGTCGTCTGCAAAGGATTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:13685:2151 1:N:0:CGATGT\nAGCTTGTGGTAGATGTTTCTAGGCCTAGGACGCTCCCTTCAGGGCAGTGGGCTCCTCTCTGACCTAAGGCAGGAACAGAAATGCCATCGAAGAGCAACTAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:13542:2163 1:N:0:CGATGT\nGCCAATCTTCCATTTTTTATCTCCTTCACTTTGAGCTCAGCAAAGGCTTCTGGGTCGTCGGCTAGGCCCAATGGGTCGAAGCTACCACCCGGGTAAAGCGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:13715:2166 1:N:0:CGATGT\nAGCCCATGCTCGCGGATACCGAAACCCAATGCAAGTGCAGCACAAACAAGAAGTATGATCAATATTGGGTCTTGAAAAGCATTCCATACAAAGTACAGGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:13644:2172 1:N:0:CGATGT\nCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGATCTAAAGGATCGTTAGGCCACGCTTTCACGGTTCGTATTCGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:13532:2197 1:N:0:CGATGT\nCTGTAACATAGACCCATCTTTAGTGAATCGGACTCTCTCAACTTTACCCTTCTTAACAGCGCTCAAAAACTCACTATATCTCCATTGGGAACCTTCTGGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:13503:2199 1:N:0:CGATGT\nCCTTGACAAGCAGCAACATGTAACGGCGTTCGAGAATCGACATCGACGAAATTCACATTCGCTCCTAAATCAACCAGCTCTTTAATCCCTTCCAAATCGCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:13579:2207 1:N:0:CGATGT\nAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGTTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:13604:2219 1:N:0:CGATGT\nCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGATCGACTAACCCATG\n>D7DHSVN1:151:D12V0ACXX:8:1101:13675:2228 1:N:0:CGATGT\nCCTTGGTTTAATGTCCGCGCACCTTTGAGCAGTCCAAGGAAGGGACGAGATCGATGCCTAAGTCGACACCACACTTGCTGGCGAGGGGACCGGCGTAGGCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:13614:2248 1:N:0:CGATGT\nTGTACTTCCTCGGATAGCAGATAGTGCAAAGAATGACAAAAGTGCGGTGTTGCGTGCTAGATGCTGTGAATATGCACACTTAATTTTGGAGCAGTGGCCTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:13871:2050 1:N:0:CGATGT\nGCCGTCGCAGCATCAACCCCCCACCGGGATCCCGCTCCGTGCCATCCCCTTCAACGTGGTGGATCACGGGAACGGGAAGCCGGATGTCGGTGATAGGAGTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:13996:2163 1:N:0:CGATGT\nGTGGTATTTCACTTGCGCCGAAGCTCCCACTTATGCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:13949:2201 1:N:0:CGACGT\nCCCAAGTGAAGTCTCTGATTGATTGCTCTACATGTCAGAGGCACACAAAGTTGAAGACATTAAATTAAAATACAGAGATAAGGATTTCTCCTCTTTCCTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:13903:2210 1:N:0:CGATGT\nGTTGAAGGCCCTGTGGTGAAATTAGGCTCGAAATGTTTTTCTCGGTCTACCCATAAGGGTGCCATTATGAAGCACCAAAGGTTCTCAGGAGCAGGAGAGGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:14157:2018 1:N:0:CGATGT\nTCCTAACCAAACTCAACGCCACATTTTTCATAGCCATCAATGCAATTTCTTTCCCCAAACACGCCCTTATACCGGCTTGGAAAACCGGATATCTATACCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:14079:2034 1:N:0:CGATGT\nCGCCACCACCAGTACCTATTTTTAAGAAACCTTGCCCTCCAATTATCAAGAAACCACCAATCCCAGTTTACGAACCAAAGCCTCTCCCTCCTTTGCCAAAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:14220:2084 1:N:0:CGATGT\nTCGCCATACATCAATAACATTATCAAATCCCCATAAATTTGAACACCACTTGAGCTGCGGGCTGCACACTTTCCTGCAGTCAGATCGGAAGAGCACACGTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:14161:2103 1:N:0:CGATGT\nAGGTTCCAAAAACATCTGACTCAACAAATCCGACGGCTCAGATGCAATCACAGATCTATTAGCTTGAGCCTCTAAACTCCCAACCATGATGATCAACAACT\n>D7DHSVN1:151:D12V0ACXX:8:1101:14225:2170 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAACAACACACACTTCGACAACCGCCACCCCTGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:14165:2207 1:N:0:CGATGT\nATAAATTCCCAAACAAATTTGATGGATTTTATATCAAAGTTGCTTTTGTTGGCTATATGCATAGGTACCCGATATGGCTGCTTCAGTTCCAATAATTTGAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:14187:2212 1:N:0:CGATGT\nCGCTTTGCCAACAAGCTCTTGCCACTTGCAACAGCAGTGGGATTAGAAAATGAATCTGCATCACTATGTAGTCTAACACCACAGGATGCTGAAGCTCTCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:14143:2222 1:N:0:CGATGT\nGCCACATTATTTTTTGGAAAGTTCTTCTCTGACCATTAAAGTAGTATGCATTTCACAAAAATAAATTTGGAAAGAGGAAAAAAAAAAAAAAAAAAAACACT\n>D7DHSVN1:151:D12V0ACXX:8:1101:14058:2230 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAACGGAGAGCAAGTTGGCGAGGTGATTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:14220:2244 1:N:0:CGATGT\nAAGCATACACATAGAGCATGCAAGGGCCGGTCAAGCCGGTTTTAGATAACTTTTCTATATAACAGGGAGAAGCACCACAGTAAGGCTAGCATTATCACCAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:14287:2012 1:N:0:CGATGT\nAATAGATGCATAATTTCAAAGCTGATATACCCTGAAAATAACTGGTTTCAATTTGCTAATCAGAACATACAATAAGTTCTACTGTTGATTAACATCTCTAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:14488:2032 1:N:0:CGATGT\nAGATCATCATAATTCAACATATTTACTAAATGCTCATAACTTAGTAAACATTTTGACAAACACACAATGACTTGTTCAAGTATGGAAGACAGCCATTTGAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:14324:2044 1:N:0:CGATGT\nCTCGGATTCTACTTCCTCTCTAGGACAACTAAGATCCACATCTGACGGACCAGCCATAGCCGTACTAGACGACCTAAGATCAAGCTTCAAAGCCTCTGCAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:14294:2151 1:N:0:CGATGT\nCGGTGGTCGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGTAAAAAAAAGAACCATTGACGCTTTGAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:14379:2159 1:N:0:CGATGT\nGGCAGAAATTTGAATGATGCGTCGCCAGCGCAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACAGGCAAAGCCCGCATCGACCTTTTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:14362:2206 1:N:0:CGATGT\nGGCTTTTCTAACACTCCTCCTCCCGCTGATCCAGTTGCTGACACAGCCATTAGAAAGCCACGTTGGTTCCACAATCCTTTACAAAGAACATGTTTATCCCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:14342:2223 1:N:0:CGATGT\nCACCGATGCCTTTAGCTTTTCCTCCAAAGCCTTGGCAGCCGTTACATCTGAAAAGCCCACAAAGTTATCCTCCTCCCCAAAATGAGCTTGAACAGGAGCTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:14717:2007 1:N:0:CGATGT\nCATGGCAAAACCGCGACATTGCTGGAATCACAGCCTGTCATGACTGACTGCATTGCGGATGTGTCCACAGGAGCATAGACAACCATGGACTCGTAGTAGTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:14517:2074 1:N:0:CGATGT\nCCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGCTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:14731:2074 1:N:0:CGATGT\nCTCAATCTTCACTAAGTTATGCTTCTTTTTCCCCACCTGCTCACAAAGTCCCTCCTTAAGTTCAGCAATATCTTGATCGATCAATTCTCCTCCTTCAGCCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:14538:2151 1:N:0:CGATGT\nATTCCTCATAACACCAATATCATAAACTGGGGTGAAATCAGGGTTAAACAACCCAAAATTCTTCTCAGCAATAGGTCCAGGCTTCTGATTCTCAACAAACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:14713:2165 1:N:0:CGATGT\nGCAAAGCAAAGCAACACCAAAGTAACTACACATTGATCAAATGCACAAATTTTACAAAATTATTCGTAGCCTTCTGGCTTGTAGGCGATGAAACTGATGCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:14988:2172 1:N:0:CGATGT\nGGGGGGCCCACTGGCCGACGCCTGGAGCGCGCAGGTGCCGAGGCACGCTGTGACAGCGCGCGCTGACTACCACAATCGCGAGGACAGCACTCCCGGAGACT\n>D7DHSVN1:151:D12V0ACXX:8:1101:14947:2188 1:N:0:CGATGT\nTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACTACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:14924:2194 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAACACCTACCTATACCAGAACATCGATATCCTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:14879:2224 1:N:0:CGATGT\nAGGGACGTAGTCAACGCGAGCTAATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:15004:2005 1:N:0:CGATGT\nNTCGAGCAGTCCACCGACAGCCGACGGGTTCGGGAATGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAAGTTACGGATCCATTTTGCCGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:15080:2021 1:N:0:CGATGT\nGGATAAACTCCTCATCTTGAGGGCGTTCAAACACCACGGTGCTACTTAGCTCATTAAGCATGGCGCTAATCCCATTCTCCCTGAGCCGGTCTTTAAGGTAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:15078:2061 1:N:0:CGATGT\nCGCCATCAAGAAGAATTTCTGGTTCGACGATGGGCACGAGACCATTGTCCTGTGAAATTGCAGCGTAACGAGCAAGTCCCCATGCAGCTTCCTTGACAGCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:15124:2095 1:N:0:CGATGT\nGAGAAGCTCAGAAATAATGAGGTTATTATATTAATAATTAATCAGTATGAGAGAGAAGCTCAGAAATAATGAGGTTATTCCACCCCATCAATGGGATTAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:15058:2138 1:N:0:CGATGT\nAGCACCAATGTCCTCAGGGCGCTTGGTCAAGTGACCGTGAACACCTTGAGCAATGTCAGGACTTTGCTGCTCAATGTAGACCAAGACCTTGCAGTTATCAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:15051:2178 1:N:0:CGATGT\nTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:15018:2191 1:N:0:CGATGT\nGGGGCTTTGAGGATACGTGAGGTAAGGATGACGTCAGCGGACGGGATTTGAAAGGTCTTCACTGTACAGTAGGCCATTTGTGTGTTTATTTCTACTCACTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:15071:2197 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAACTTCTGGTACAACAGCACCCGACCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:15119:2245 1:N:0:CGATGT\nTAAAATTGGAGCAAAACTGAGAAATGAAAGAAATGGAGAGCAAGGGAATAGATGATTAATTTTATCAATTAATGAACAGGTGGTAATTGAGAGATAAGGAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:15494:2018 1:N:0:CGATGT\nGCAGGATTGGGGTCGAGCATGCGAGTGACAAGAGAGCACGCTTCAGGGGAGAACCAAGCGGGGCAGCTGAAATCACCCTTATAGATACGACGATACATTCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:15308:2054 1:N:0:CGATGT\nCGACCTGTTATTGCCTCAAACTTCCGTGGCCTAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:15437:2087 1:N:0:CGATGT\nCCTGTTATTGCCTCAAACTTCCGTGGCCTAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGAGTCCGCATAGCTAGTTAGCAGGCTGAGGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:15353:2100 1:N:0:CGATGT\nGCCCACTTCTTGAGCATAAACCAAACAAATAAATTAAAAAATCCAGAAAAACTTTCATTCACTCGAGATAGGATTTTCATTCGGAAATCACTTTTAATTAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:15259:2220 1:N:0:CGATGT\nCTCAGAAAGAAAACTTCAAAGACTGTTTTAATTTCAGGACTCAAAACTAAAGATTCAGATTATCCTGCCCTGTCATCCATCTTATCATGTTCGATCATCAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:15732:2003 1:N:0:CGATGT\nNATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAATGAGGAATTCACCTGCGCCGCAGGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:15541:2026 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAACCAAAAATAGTAACCTGTGGGTAGGGGCAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:15671:2108 1:N:0:CGATGT\nCTTGGGGGACTAATCCCCTACTGCAGGTCGGCAATCGGGCGGCGGGCACACGCGTCACTTCTGGCCCGGATTCTGACTTAGAGGCGTTCAGTCATAATCCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:15607:2111 1:N:0:CGATGT\nCACAATCACAAGCACCCATACACTCCTCCATTTTTGTAACAAAGCCTTTGACCTGGACAGGAATTTTCCATTCGATCGAGCGCAACTTCTGTGCAAGCTTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:15572:2115 1:N:0:CGATGT\nGTCGGGGAGCTGAAACGTTATGCTATTCATTTTGACAGGACTGGTCAACCAAGTGGATCCGCTGAAGTAGTGTATGTTAAGAGAAGTGATGCATTTGCAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:15647:2138 1:N:0:CGATGT\nATGCATGCAAATTTATCAACTAAATAACAAGTTTGAAATATAATAGATTATATTGTAACAATATTTATGAATTGTCAAATAATTTCATAGGGTTATATGAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:15546:2184 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAACAAAAAAATTGAGTCGCCCACAGCGCACGGGTCAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:15833:2017 1:N:0:CGATGT\nAGCAGAGCAGATGTTTCAGCAACAGCCCCCTCAACAACTCTAACCGCAGAATTGTCCAAATATTGTGCTAAATATTTAGCCATCAATGATGATGTAGCAGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:15784:2055 1:N:0:CGATGT\nAGGGCCGAGTGTTCCACCAGTGTGAACCAAACCATTCTTCCAAAACACCCAAATGATGCGACTGTTCATGCTCGTTTCCTGAGAGGACATCCCCTAGTATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:15752:2130 1:N:0:CGATGT\nCGTCGATATCTTTTTCCTCATCTTCTTCCACAATAATCTGTTCAACCACCTTGGATATTAGGTCTCGATCAACCTTCCCAGATGTTGTCACTTTCAGAACC\n>D7DHSVN1:151:D12V0ACXX:8:1101:15887:2145 1:N:0:CGATGT\nCGAAATATTAATTATAACACAAAAAAGAAGGTTACATTTGAACAGATGAACTGAGAGAGACTAACACACAACACTCTTTCACTTCTAGAGTTCCTTGGTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:15910:2186 1:N:0:CGATGT\nGGATGGTCCTAGTTGTTGGTTAGGTTGAGGTGCAGCAGCTTCGAGCAGGGCTCGGGTCCCACGAGCTGCTGGCCTAGGGGGGATGTGGGTCCCACAAGAGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:15847:2230 1:N:0:CGATGT\nTCCACGTCGCTCACCTCAATCTTCTCACATGGTGCTAAGCTGCTACAAGCCAATGTCACTACTTCCACACTGCTCGATGTTCCTCTAACGTTCTTTATTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:15932:2230 1:N:0:CGATGT\nCCGCAGAGTCAAACAAAAAATAATACCAATTACGTCTCAGGTGTATACGGGGAGTACTAATATGGTTCCAATTATTCCTAGCAAAGCCTAAGATCTTAGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:16089:2097 1:N:0:CGATGT\nATTCTACAACATCACTGAAAACCATATCGACATTCTCATCAGGCTCACCAACCATCTGGTGCCACATACCAGGGTAGATCTTGAGAGTCTTATCCTTGCTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:16178:2104 1:N:0:CGATGT\nCAATAAGCATCTTCCAATGGCATCCTCCAAAGTTTTTCCCCCATCACTTCTGATGCACTAAACACCTCACTGGAAAGTGCATCATTGGGTGTAAACACACC\n>D7DHSVN1:151:D12V0ACXX:8:1101:16042:2196 1:N:0:CGATGT\nCTGATGAGTATGAGGATTTACTAGGAGATTTTGAGGTTTGATGTCACGATGACAAACACCAATACAGCGATGAATGTACGACAAAGCTCTGAAAATCTGAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:16029:2231 1:N:0:CGATGT\nGTGGATGAATCGGACTTCTTTGTGGCTGGCCAATCTTCATCCCATTTCGTGCTGCTCTTAGCAGCAGAGACTGAAACTGTTCCATTCATATCCTTTGATGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:16357:2009 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAACATCCATGCTACTCATCTTCCTTAATAGAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:16336:2095 1:N:0:CGATGT\nTTGTGTAAGACCGTCTTACTATGCAATGGTTTATAAAACAATTTTGGAAAGGAGTACTTTTGAAAATAAAGGTATTTGTGAGTCATTACACAGCGAGATTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:16253:2098 1:N:0:CGATGT\nTCCGGGACCAGTAATTGAGTTCCCTGTTTTTCATATCTGTGTGCTATGTATGTTGTGATTGCTCTTGATTCAAAGAGCTTAGAGTCTCCATCTTCAAAGGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:16364:2115 1:N:0:CGATGT\nGCTTTCTCAAGGGTTTCTTCAACCGCTGATTCGATAACATCAACAGCCTTGGTTGTCTCAGTTTCTTCAGGTTTTGCTTCCACCTCTTTCTCCGGTGTTTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:16436:2145 1:N:0:CGATGT\nTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTGTTAATCATTACT\n>D7DHSVN1:151:D12V0ACXX:8:1101:16458:2199 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGCATGCCGTCGTCTGCTTGAAAAAATTTTCGGGCGGTGGCTACGCGGCTGCAGGTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:16584:2011 1:N:0:CGATGT\nTGAGGAAAGCCCCTGGTAAATAGCCCAAGACCAACAAGGGAAACCACTGGTACGGCAACAACCGGGGTAATCAGCCTTGTCATATTTCCCCATATTTTGCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:16714:2042 1:N:0:CGATGT\nCCCAAAAATGTTTAACTTACAAACTCTTCAAAGTGTTCCAAAACACACATGTTTGCTCTTTTTTCACTTCTCTTTATGTGATTCTTAAGCAACATTACGTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:16606:2070 1:N:0:CGATGT\nGGAGATGCTACAAGTATACACGAATGGTATCTTTTCTGGATTATTTGCAAACACCGATGTTTATCTTCAATCCATTGGCATGTTTGTCGTCGAACAGTGAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:16502:2087 1:N:0:CGATGT\nAGAGAAGCAAGTAATTAGGGCTGGATCCGGACCCAAACCCGTACCCGGTCAGAAAGTTACCGTTCACTGCACCGGCTTTGGGAAAGATGGGGACCTTTCCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:16609:2100 1:N:0:CGATGT\nTCCGCTATGAGTGCTCGGTAAAACGACCATTTTCCTAACTCTTCCATATCGAACAATGGTGATGGTGGTGGATCTTGGTAGTCTTTTGCCATGTCTCGTGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:16661:2175 1:N:0:CGATGT\nCAAACATCTTTACCATCACCATTCAAAACAATACTTTTAGCAAAAATAGAAGCTTCATTAGAAACCCTTTCAAGGTCCATTTTATATGCTTTTCCAATCAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:16633:2184 1:N:0:CGATGT\nCGCCGGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTAGACCCTACCTCCGGCTGACCCGTTTCCAGGGTGGGCAGGCTGTTAAACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:16573:2198 1:N:0:CGATGT\nGCGAGCTTTTACCCTTCTGTTCTACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:16963:2025 1:N:0:CGATGT\nGTGGTGTTTCATCTTCGGCGTTCATACAGCCTAAGATCGGTATTTCATCGCCGTCGATTGAGGTGTATATTGCTGGAATGTGTACGGATATGCCGGTTATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:16896:2035 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAACAAAAAAACTTATGTTTCATCACAGCTTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:16835:2043 1:N:0:CGATGT\nCTTACTAGGAATTCCTCGTTGAAGACCAACAGTTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:16818:2056 1:N:0:CGATGT\nTTGCAGCAATCTCATTGTGAGGAAGACCAGCAGCAGAAAAGAGAGGAATTTTCTGTCCTCTGGCAATTGAATTCATGACATCTATCGTGGAAATTCCCGTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:16884:2119 1:N:0:CGATGT\nACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAACTAAGGCCAGGAGCGTATCGCCGGCAGAAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:16782:2140 1:N:0:CGATGT\nTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGATCAGCACTCGGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:16755:2145 1:N:0:CGATGT\nCCGGTCTCGTCTGTCTGCTGCAACGGGGTCCGGAAGCTGAATAATTTGGCTTACACCACACCTGAAAGACAACTAGCTTGTGCTTGTATTAAGCAAGATAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:16777:2172 1:N:0:CGATGT\nATGTATACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAACTAAGGCCAGAAGCGTATCGCCGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:16797:2177 1:N:0:CGATGT\nATTAAAATGTACAGATAATCACATATACACATACATACATCATTTGTTGCCTCCTTCCCCAATGAGATAAGAGTTGTGGGTGGGTCATGAGCGAGCAGGAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:16822:2220 1:N:0:CGATGT\nCTACGAATCTAGGTTTGTCGCCCTGTCTGAGAACACTTCTGACACGCCTTGACATGCTTAAAAACTTGGTCACTTTTCTTCTAGAAGAAGCCTTGAAGGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:16884:2234 1:N:0:CGATGT\nTACCAGAGTTCAGACCAACATGACAGGCAAAAACATCCTACTATCATATTCAGACATGACAAGAACGTACAAGATTATTACATCAGCATCCGCTACTAAGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:16805:2234 1:N:0:CGATGT\nCCTTTGCAACCGCTCCTCGAACAGCTTCACCCAACTTAACCGCCTTTTTCCTCATCTCGAACCCTTCATCTGACATCATCAATGTCCTCACCGCATTCTCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:16827:2238 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGCCGTCTGCCTTATAAACCAAATTACTCAAATTAGTACCCTTTTTCCTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:17215:2009 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAATACAGTACACGAGAGTAAACTTTGCAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:17108:2028 1:N:0:CGATGT\nGGGAGCAGGAGTGATGCCAAATGCGGTGAACTCGTCAAGTACTGTTATCGGCAAGTGCCATTGTTTTGTATCGAGTTGTCAATAATCAGAATTGCTAATCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:17201:2040 1:N:0:CGATGT\nTTTCGCTCGATCCTGAGTGCGGAGCCTCACTTTTAGAGTCATTACCAGATGATGCCTGGGTCGAACCTTCTTTGCCGAGGGAAACCTTTCCAACTTCATGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:17003:2082 1:N:0:CGATGT\nGTATGATTAGAGACTCGACTAGTCACTATGGCAAAAGGACTAGAAGTGATGGAGATGGCATCTCTATATTTCAATCTTCAAATATTTGGATTGATCATTGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:17102:2145 1:N:0:CGATGT\nCTTGCATTAGCCACAGAGACCTTCCATATCCCTGCATGTTAAAGGCAACCATCTGAGCCCCATGCATCCACCCAATGAGAGGGTTGTAATTCGATGAGGTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:17165:2174 1:N:0:CGATGT\nCCACTGTTGTTGCTGTTACATCTGATGCCGTTGAAAATGTCCTTGTTGATGATGATCTGACGGCTGCTGTTGATCCTTTAATCAGACAGGTTGCAGCTTGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:17098:2197 1:N:0:CGATGT\nCTGGCAGTATCTGGTCGGAAAAAGAAGCTAACTGGTCGGAGATTAACCAGTTGTTTTTGTTCTTGAGCAAACGTATTTTTGATCAATCTTGGTTCATACAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:17019:2199 1:N:0:CGATGT\nGTGTAATTAAGCAATGGGTAAAGGTCTTACGATCCACTAAAGCCCATACATACCAACAAGGCAACAACTAACTTGGTACATGCCTCAAATAGTTTTATTCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:17147:2221 1:N:0:CGATGT\nTAGGAGAGGAAAAACGAAAGAAAACAAAAAAGGAGAAAAAAATCGAAAAAATGCAATCTCCGAGAAATCGAACCGCGAAAAAACGCCGATCTCGAACAGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:17353:2012 1:N:0:CGATGT\nTGGAATTCGTCTTTGGGAACACATTGATCCAGATCTTCTTTTGGCTGTATTTCTTCCGGCTCTTCTGTTTGAAAGTTCATTCTCTATGGAAATTCACCAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:17275:2089 1:N:0:CGATGT\nGCTGATCTTTTCTTTGCTTCTGTTAACCCCAAAAATAAAAAATAAAAATACATGATATGATGGCAACTCCTTGTCCTTTCTGAATTCTGCCACCTCTCATC\n>D7DHSVN1:151:D12V0ACXX:8:1101:17336:2105 1:N:0:CGATGT\nCTTTTGGTTCCTTCCCCTTTCCTTCTTTGGCTTTCTCCTTTTCAGCCTTCTTCAACTTCTCCTTATCTTTTGCAATTTCCTTCTCAACTTGCTTGTCTGAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:17408:2114 1:N:0:CGATGT\nCACACCAGCATTCAACATGCGCTTTCCCTCATCTGTAGTTGCAGCTTCATCATGGTATTCGTACTGCTCTTTCTCAGTGCCATCCGTAGCTACCCATCCCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:17251:2114 1:N:0:CGATGT\nGGGCAAACGGCACGAAGGAGATAAGAAATAGATAGGGAATGTCTGATGAAAAATACATGTGCCATTGGAAGGAATCAACCAATGTTCTCTCTTACTTCGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:17365:2118 1:N:0:CGATGT\nCAGTTGCACTAAACTTAGCCCAGTTGGTGGCCCTGCTCAGCCAATCCAAATTGTCCCGCAAAAATGTATCAACAGTAGTACCAGCATGCATAATTGCATTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:17457:2144 1:N:0:CGATGT\nCTCAACTTGAAACCCGATTTTCTCACCCAGTTTTACCAACTGATCCTCATTGGTTATCGCCCTAGATCCGTTCCTTGATAGAATGACAATTTTAGGCTTAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:17467:2172 1:N:0:CGATGT\nCTCTTTTCCATTACTGTCCTCTCCTGACACATTTGGCACCTTGATTTCAGGCTCTTGGACCTCATTCTTCTTGGAGTCATCTCCGGAGGACTTTTTCTTCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:17646:2110 1:N:0:CGATGT\nTATCACCAACCATCAACTTCAAGATACTAATTGTGTTTTACAACAACAGGGAACACAATGGATGAATCCGAAGTTACAATTAAATTGACCAGGAAAACAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:17694:2180 1:N:0:CGATGT\nCCCGAAGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACC\n>D7DHSVN1:151:D12V0ACXX:8:1101:17867:2050 1:N:0:CGATGT\nCCGGATTTTTCACAAGAACGTCAACAACAATATCAGCTCTATGAAGGTCAATGTGAGGAAGATGAATCCCCGAAATATCTGCAGTTGGCTTACCGAACCCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:17967:2191 1:N:0:CGATGT\nGTCCGAACACGACGGGGCTCTCACCCTCTCTGGCGCCCCTTTCCAGGGGACTTGGGCCCGGTCCGCCGCAGAGGACGCTTCTCCAGACTACAATTCGAACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:17936:2194 1:N:0:CGATGT\nCAGGGAAGTGATGATGATGGGGCAGATGATGGTGATGTATCGGAGGAAGAAGAGGACTCGGGGGTGGAGTCCCCTGTAGTTGAAAATGGGCTCGGGTTGCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:17949:2234 1:N:0:CGATGT\nTTAAAGTTTGAGAATAGGTCGAGGGCATTGCACCCCCGATGCCTCTAATCATTGGCTTTACCTGATAGAACTCGTTTAGAGCTCCAGCTATCCTGAGGGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:17992:2243 1:N:0:CGATGT\nTCGCTGATGTTATCGCCTCAGCTTGCTGTGACGGCACACCTTGTGCCTCTAAGCTCTTTACAAGAGCGAGAGGATCGACAAGAAAAGCACGTTTAGGTTTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:18196:2037 1:N:0:CGATGT\nCTTGGTGTTATTATCTAGAATCCAATCGGAGGATCAAATGATATCCAACCGTTCAACTTGTTCTCGCTACTTGCCATTGCATACTGATACTTATCATCCAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:18027:2114 1:N:0:CGATGT\nGTTCTGTGATAAGATGCCTGTGAAGATGACCTATTCCTTTGGTTTTCCCTTGCAAAATGACGATGACCCCTTCGCATTGCAGCAGCTGCAGCTAAATGCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:18140:2188 1:N:0:CGATGT\nTGTACTCGTGCTCGTTAACACCAACAACGAACATAGGAGCATCCTTGCTGGGAGCAGAGATGATAACCTTCTTGGCACCACCCTTCAAGTGAGCAGCAGCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:18151:2229 1:N:0:CGATGT\nCACTCCCGGAGACTGGGTTTCCGTTGCCCTCACAATCCACGTCAGTCCGCACCCCGAGCCGATCGGCGGACCGGATTTAGGCCGTTCCGCATCCGACCGAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:18205:2249 1:N:0:CGATGT\nCGGGAGGGAAGCGAATGGGGGCCGGCGATGTGCCTCGGTCGGATGCGGAACGGCCTAAATCCGGTCCGCCGATCGGCTCGGGGTGCGGACTGACGGGGCTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:18377:2005 1:N:0:CGATGT\nNTTCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:18312:2015 1:N:0:CGATGT\nCCGAAGCGACAAAGGGCTGAATCTCAGTGGATCGTGGCAGCAAGGCCACTCTGCCACTTACAATACCCCGTCGCATATTTAAGTCGTCTGCAAAGGATTCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:18277:2040 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTATCATTAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:18386:2074 1:N:0:CGATGT\nGCGGGTCGAGCCACCCTGATTCGGAAGACCTTGTCAAGGACAACTGGTTCGAACTCGGTCACTTCAGATGATGGTGGTGGTTTGGTGGGTTTAGGGGCTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:18495:2107 1:N:0:CGATGT\nCCTGTACGCAAGGGCAGGATGGCGGGTATTCAATCATGAGGAAGAAGCTCAATACCATGGACAATAAGACCCGACTTATAAGAGCTGGTATCCACACCAGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:18353:2150 1:N:0:CGATGT\nATGAGATTTTCAGGATTTTCGCCTGTTTCTTCTCGTCCTCGCTGAATGAGGTATCATAATCAACAAACTTCACAGCCTTTTCATATCTCCTAGATGCCCTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:18265:2154 1:N:0:CGATGT\nGGTCTTTATAACCATTGAACTACCCGATGCAAAAGATGTGAAGTTGAAGCTTGAACCTGAAGGCAGATTCTGCTTCTCAGCCATGAAAGATGGCAACCCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:18461:2195 1:N:0:CGATGT\nCGTTGCTCTTGTTTGCGCAATGTCTCAAACTTTTCCACGGTATCAATATCAATCTTATGCTTTGTCTTTGGCTTAGGTGGCTCAAAAGGGCAGGTCAGAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:18346:2203 1:N:0:CGATGT\nCCCTTCTGTTCTACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:18377:2221 1:N:0:CGATGT\nAAAACAATCACAGTAAACAAAAGCACAACCCTAATAAACTGAAACAAATAAAACAACACATCCCAACCGTGCGGCGATCCTGTAACCTTAACAAAATGTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:18465:2238 1:N:0:CGATGT\nGCGAGTTATCATGAATCATCAGAGCAACAGGCAAAGCCCGCATCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:18403:2245 1:N:0:CGATGT\nACGGAACTGGAATTTGTCATTCCATTGTGGGCAATTGTCGCCGTCTTGGTCGACCCGCGTCCGTAATTTTCGGGCCGGGTCGATCCATATCACGGCGTAGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:18321:2246 1:N:0:CGATGT\nCCGTTATTGTTGATTGCTTTTTTTTCTATCCTTTTGTCCTTGAGTAGAAATCGTACTATCTCAGGTTGTTTAGCCGCAACAGCTAGGTGCAAAATAGTATT\n>D7DHSVN1:151:D12V0ACXX:8:1101:18516:2009 1:N:0:CGATGT\nATGATCTTACAATATATATCATTACTAACATGTTAAAATATAAAAGCCTTACTTTTATCTCTCAAATTGAGAGACATGTATTATTATTATCATAAGACTAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:18576:2016 1:N:0:CGATGT\nCCAATGATCAAGTCGGGTTTGGCTTGCAATTCTGCTGAAATCTCATTTGCAACATCCTCAGTGTAAGTCTCAAGGTATGGCCAGACTTCGAACCTGGAAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:18575:2089 1:N:0:CGATGT\nCCGACACCGGAAATATATGAATCGCCGAAGGTTACTTCGAACTTGGTTAAGAAAAAGGAGACTTTGCAGATACCGCTTTTGGACATCAATTTTCCTCCAAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:18722:2154 1:N:0:CGATGT\nGAGAACAACCATTCATGTGCCCTGGTCTTAGGCACAAGGAAAATTCCACAATGATACATGAATGATTTAGAGTCTGATTGAGCATCTAGAAGCACAGCCCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:18607:2157 1:N:0:CGATGT\nCAGGTCTCCAAGGTGAACAGCCTCTGGCCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:18645:2191 1:N:0:CGATGT\nCTAGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGGACTCCCTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:18603:2230 1:N:0:CGATGT\nGGCAGCTAATGTCATCGGCGCTGGGAACTCCCTCAATGTATCAGCCTGAAGTACAATACTGGCTGACAAAGCAAAGACGGCTCCCATTAGGCATAAAGCAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:18935:2082 1:N:0:CGATGT\nTCGTGCTTTATCATCTAACGGTAATTCATCTCCCGCCATTTTTAAAATTCCGAATCTGAAGTTCAAGTTGGGGGAAAATTAGGGTTTGTTAAATGAAATTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:18852:2128 1:N:0:CGATGT\nGAGATTACTAAAGCAGAACTGTGGATGCTGAAGTCAGCTGGTGTTCAGTGTGCTGGGAGTCCTTGTTTTTGGGTGGACTCAGATGGAACCTATCAAGAAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:18955:2133 1:N:0:CGATGT\nCCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:18895:2134 1:N:0:CGATGT\nCCAAGATCGACAACCCTAAGTGTGAGGAAGCACCTGGTTGTGGAGAATGGAAGAGGCCAATGAAGAGGAACCCAGCTTACAAGGGCAAATGGCACGCTCCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:18932:2147 1:N:0:CGATGT\nCGGGGGGTTTGAATGGATAATCTGGGGGGAAGTGAATAGTGACAAGAAAAACTCCCCCAGCATAAGGACTGTCAGGAGGACCCATAATAGTTGCTTGCCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:18940:2212 1:N:0:CGATGT\nGCCAGTGTGATTGAAGCTTATTGTTCGAACTGGCCACCTGAAGTCATACAAGTCATTAGCAGAAGAAGAAACCAGAACTATCAAGTTGGAGGCACATGCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:19123:2066 1:N:0:CGATGT\nCGAAAGACCAGCTGCTTGAGCGCTTTACTGGATTTGTTCCAGCAGACTCAGAACCGCTGCTCGAATCAGTTGAAGTTGAAGCGTTTCTGCAGTAGTTTGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:19048:2096 1:N:0:CGATGT\nCACAAATTCTCCCAGCACATATTTGTTGCCTTTGAGTTCCAGCCTGTCCCAGATTGGAGCAGTAGCAAGTACAAAATGAAGGTGTTGGTGAATAGGGTCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:19200:2106 1:N:0:CGATGT\nGTGGGTCCATTGGTCCCTTGAAAGGCCTTCTTTAGGTACCCCTTTTCTAGCCCAAGGTTCTCACATAACAAGTCCAATAATTGCTCCGCTAGCTCCTCTAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:19015:2178 1:N:0:CGATGT\nTTCTTATTCGGCGAGGTACTAATAACCGTAACCTTAACACCAAACGCCTTAGCAAATTTCACCGCCATATGACCCAACCCACCTAATCCAACCACACCAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:19029:2191 1:N:0:CGATGT\nATAAAGAAGATCTGGCCCCGGAAAGCTCATCTCGATTAGCAAAATGGAAATCGGATACATGTTTTCCGGCATTGGCACCACCGCTTCTATGGGTGGGAGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:19188:2219 1:N:0:CGATGT\nGCCAACATTCACTGTGGGTGGAAACCAGGAGTTGCTGATGGTGGTGCTAATGTAAGCCCACTTGGATGCCACTCTGGAATCAAGTCCCATTATTCCCTCCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:19129:2229 1:N:0:CGATGT\nCCCGTATGTGGTGAGAACAACATTACTTTGAGCTAAAAGTTCAGCACCTTTTGATCGACCTTGTCCATAATAAACACAAACAGACAAGGAACCAGGCTGAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:19008:2243 1:N:0:CGATGT\nGGACAGCACTCCCGGAGACTGGGTTTCCGCTGCCCTCACAATCCACGTCAGTCCGCACCCCGAGCCGATCGGCGGACCGGATTTAGGCCGTTCCGCATCCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:19345:2002 1:N:0:CGATGT\nNAAAGATTTGAATCTAATTCCCCAAAGCTTTCACCCTCAACATGACAACTGACGATGCTCATCTCTGGTTCTTCAAATACAACAAAGTCCAATCCCTTAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:19484:2020 1:N:0:CGATGT\nCTGAATAGAATGTACCGAAAGAAAATGTAACTTACTTGTTGGAGTTGGAGATATACATTGAAAAACAGTAGCTTATTACTTTCACATCCTTGGAGGCCATT\n>D7DHSVN1:151:D12V0ACXX:8:1101:19352:2040 1:N:0:CGATGT\nTGCGCATTAAAGTATCCAGATCGGTTCCCGTTCCAGAAGAATGTCACATGTCCAAACTTGACGGTTTCACTGCAAGCAAAAGTGCGTACACCATTGTGAGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:19269:2085 1:N:0:CGATGT\nGCAGGAAAGATTATCAATTTGATGCAATGCCTCATTCCCATTCCTATTGATTGCGAAACAATAGGGTATGAGGGTACACAAGCATCACATAACAAATACAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:19328:2116 1:N:0:CGATGT\nGTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACCTTGGGGGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:19393:2128 1:N:0:CGATGT\nCCAGCCTTGGCAGCTCCAGTGCTGCTGGGAATGATGTTAAATGAAGCAGCCCTTCCACCTCTCCAGTCTTTCATTGATGGGCCATCAACAGTCTTTTGAGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:19290:2185 1:N:0:CGATGT\nCTAGCTTGCAACCTCTTTACAATCTCATATTTGTGCTCAGGGAAAACGCCCGCGAATCCATCAGCTTTTTCTATCAGATCATCGATTGGCAAAGCAGCAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:19742:2005 1:N:0:CGATGT\nNCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGTCACACCTTCGCAGCTAGCTTCTTAGAGGGACTATGGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:19574:2071 1:N:0:CGATGT\nACAACCAACACAAGCGCGCTAACATCCCTCAAAAAAACAAGGAAAACTATGGAGAATCATCAACCAAAGGTCTCCGAAGCTGCTGCAGCTCGTTGCTCATT\n>D7DHSVN1:151:D12V0ACXX:8:1101:19604:2085 1:N:0:CGATGT\nGGTTTTTGTTTTGAAGGGAAAATGAGTGAAACCCAGAAGTAGAAATGAAGTTAGACGAAGAAGAGCTGAGTTTTGAAGCAATGCACGTAAGGCGTTTGTTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:19690:2092 1:N:0:CGATGT\nGCCAGACAAGAGATCCTGGTATACGAGCATGATTGATGGAGTTGAGTGAGATTTCTCTCTCTTCGACCACTTCCTTGTTCCTCGCTGAGGAGATTTAACGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:19738:2097 1:N:0:CGATGT\nTGGGTGGTCAAGGTCCCTCATCTGTGGCAGTGGGTGGTGCTGGGGGTGGTGGTGCTGGTGGGTATAGTGCTCCTTTAGGCGGGGCCTATGCTGGGTCTCAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:19502:2102 1:N:0:CGATGT\nTGGGTTTCATTTGCAGGTACATGGGTCGCACTTGCAGTTGTCTCCGCACTTGCATCCTCCGTCCTCTCCACTCATTCCCATCTCTTTGTTGTCCACGTACG\n>D7DHSVN1:151:D12V0ACXX:8:1101:19531:2128 1:N:0:CGATGT\nGGAAACGTTCACGTTGTTTGCGCCGAGTTCGAGGTACGCTTTGTGGGACACTGAGTGTCAACTGCCCCAAAAGTGTGGGGAGTTGGGGCTTTGTGAGGATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:19669:2166 1:N:0:CGATGT\nCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATAATGTTATCCCATGCTAATGTATCCAGAGCGTAGGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:19664:2187 1:N:0:CGATGT\nATACAATTCCATATGGTGCAACATGACCAATAACAAAGCACAACAATGAAAAGAAGGATAGATAATTTAGAGACAACAGTGCATCCAAGTAAATGATACAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:19595:2241 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGAGGTATCTCGCATGCCGACTTCTGCTTGTAAACTAGGCACTAGGCATGGTAGTTGCCTCCATGCGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:19893:2049 1:N:0:CGATGT\nCATGAATCATCAGAGCAACAGGCAAAGCCCGCATCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:19944:2061 1:N:0:CGATGT\nCCCCGGCCGGCACGCAGCAACCCGCTCTCGCCGCGCGAGCAGCTCGAGCAGTCCACCGACAGCCGACGGGTCGGGGAAGGGGACCCCCCCCGCCAACCCTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:19859:2062 1:N:0:CGATGT\nACTTTTCGGTTTACCTTCAGGTATGGCAAAGCACCGATCACATTATCATAGTCGCTCCTATTGACTTGGACCATCTTAGATAAACGCAATTTGCGCTTAGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:19823:2093 1:N:0:CGATGT\nCTTTCGATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGGTCACATGGAACCTTTCCCCGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:19896:2109 1:N:0:CGATGT\nCAGCGATCTCTTCCCCAGGTTTCTTCGAATCAAGAACTCGACATATCGTCATGGCCAGTTCATCTCGTGAAAGTTGTGAGGCAGTTCTTTGTACTATTTGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:19919:2123 1:N:0:CGATGT\nATAGTAATCAATGTTTAATGTCATACCCGACAATGACCACAGCTCCAGCTTTCCCCTTGAGCATACTCTTCCCATGGCGAACAACGGCTGTGAATCTTTAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:19881:2132 1:N:0:CGATGT\nCCGGACACTTCACCGGACCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGTTGATGACTCACGCTTACTAGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:19765:2133 1:N:0:CGATGT\nCCAGTAACGGAAGTATGAATCTCGATATGATCGGTTTTCCTTTTTTGTAGACGACTTTGGCTTTTTGGAGGATCGTGGAGCTGATACTTTTTCTGGGTATT\n>D7DHSVN1:151:D12V0ACXX:8:1101:19780:2149 1:N:0:CGATGT\nCACCACTTCGCTGAGGACTCACCCCATGCAATTCGAAGTACAAAGTTGAGCCTAATCGAGTCTGAGATTTCTCATCATTGTCCTGTGTATCAGATGGAAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:19887:2173 1:N:0:CGATGT\nCCCCACCTGACAATGTCCTCCGCCCGGATCGGGCCCCCGGCGGGGGGGCAGCCGCGGAAAAAAAGGCGGGGGGCGGGCCCCCCCTCCCCCCCGACATGATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:19912:2174 1:N:0:CGGTGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTACGCCAATATCTCGTATGCCGTCTTCTGCTTGAAAAGAAGGAAGGAATTTGCCAGCAAAAACCAGGGGAGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:19757:2182 1:N:0:CGATTT\nCGAGTCAGACGAACGATTTGCACGTCAGTATCGCTTCGGGCCTCCACCAGAGTTTCCTCTCGCTTTGCCCCGCCCCCGCATAGTGCACCCTCTTTCGGGTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:19929:2184 1:N:0:CGATGT\nGCCGTAGCGAGAAAGGTCGCTCCCTGTTGGGGCGAGTAGGTGAGGCCCCTGATGCATAAGAGAAGTGAAGGCATCCTTGGGCAAGCCAAAACCAAGGGCAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:19945:2225 1:N:0:CGATGT\nCTTGGCCGACCACTCGTCGCCGGATTTCTTGCATACGAATGTGTAAACACCCATTGCCGGAGATAAAGGAGATGGGACGAGAGAGTTGTGGGTGTGAGAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:19876:2236 1:N:0:CGATGT\nCCTCTGTATGTCAAGGACTCTTTACCGAAGCCAGCAAGATGTGGTGCGAATGGCATCATCCATGAACCCACAAACCAAAATGAAGCAATCCATAATAGCAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:20218:2007 1:N:0:CGATGT\nNCACTCATCAAAACCAGTATCATCAGCATCACCAGTTTCAGCAGGCAAACGGGTACCATGACCACTATAATGAACAAAGAGATAATCACCAGGCTCAGCTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:20219:2030 1:N:0:CGATGT\nCGCCAATCTCCCTCATGGTGTCAAAATATTGGGTCACCAGGACCATGTCCATGATGTCCTTGGCAGTAGTGCCGGGCACATTCTCAGAGAAGTTCAGCACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:20126:2038 1:N:0:CGATGT\nCTAATTTCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAACTAAGGCCAGGAGCGTATCGCCGGCAGAAGGAGCAAGACGACCGGTGCACCCCGAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:20224:2057 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAGACACAACATCAGCGTCAGCGATGTCACGCTCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:20187:2074 1:N:0:CGATGT\nACGGGGGTGATCTAAGAATACAATAGATATGGGGAAGGCTGTTGTTGTTCTTACCAGCAGTGAAGGTGTCACTGGAACTATCTACTTCGCCCAAGAAGGCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:20034:2136 1:N:0:CGATGT\nACCAAGATCTGCACCGACAGCCGCTCCGCCCAGGCTCACGCCACAGGTTTTGCGGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGTACTTGCCCCGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:20097:2206 1:N:0:CGATGT\nTCTCGCTTACAGACCAAGCCGACCCTTCAATGTAAATCTTGTATCTGTGTATGCATTGATGTGACAAATCAGACTCCTTGAATCCCTGCCGCACTTCTTTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:20194:2243 1:N:0:CGATGT\nACAAAATTGTAATCAGGACTTCTCCAGTATGTCCACCATTGTTTCCAAAGGCATGATTTAAACTGACCCCATGTTGATTGGGCATATTGGGTTGGAAAATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:20400:2056 1:N:0:CGATGT\nCGAGAGAGCAGAGAGCGAAGAGAAGGGTCGTTGTCGATGAACGAAGTGAGGAAAACGGTGCCGTTTTCGACGAGGGGACGGAAAGAGAAGAGAAGAAGAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:20337:2063 1:N:0:CGATGT\nGGCCAAAGTACTTGTCTCCGACGAGGCTCGTAAGGAATTCTCTTCTCTCCGTCGCACTTTTGACGAAGTCAACCTCCAACTCTCCACCAAATTCTCTCAGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:20324:2103 1:N:0:CGATGT\nATTTTATAACAAGGGAGGGTTTGTTTGGATGGAGTATTATTTTACAAGAGGGAGTATCGAAAATACAAGAATGATAAGATGAAAAAAAAGGGGGTGAGGGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:20468:2122 1:N:0:CGATGT\nGTGGCTTACTTGCATCATCATGGCTATGAGGATAAACTTCCTTGGTATCGTGGAGAGGAATGGAACTACCTTCGAGGAGGTCTAACAACGCTTGACCGTGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:20357:2123 1:N:0:CGATGT\nGTGTAGTGCTAGTAGTAGATGGAGAATTCTCCTTTTGTTTGCTCTCAAAAAAGGTTGATCCTTTCTTGCACGCTTAGCCGTCTTGTAAGTTTAGGTGTCTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:20336:2159 1:N:0:CGATGT\nGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGCATAAGTGGGAGCTTCGGCGCAAGTGAAATACCACTACTTTTAACG\n>D7DHSVN1:151:D12V0ACXX:8:1101:20434:2160 1:N:0:CGATGT\nTGGCATGGACATCTAAACACATCTTAACCATGAAAGTCCGCCTTGATGAACAGAGAGTTACGAAGGCGGCCTCTCTAAGCAAATTCCTGGAAAGAAGTTAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:20461:2182 1:N:0:CGATGT\nCACCGGTCCAAATTCGAAGATCCTCAATAAAATCATCAATATTTGAGTTGTTTAAAAAAGAAATGGATTCGATAACCCTGTCAAGATCCTTGGTAGAATAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:20357:2188 1:N:0:CGATGT\nCGCGCGGCGAGAACGGGTTGCTGCGTGCCGGCCGGGGGACGGAATGGGAACGGCTCCTTTTGGGGCCTTCCCCGGGCGGCGAACAGCCGACACCGAACTGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:20591:2043 1:N:0:CGATGT\nGGGGGATTAGGTTTCTTGTATACTGGCACGGGTGGTGGGAGCGGTTTCTTGTATACTGGCACGTGTGGGGGATTAGGTTTCTTGTATACTGGCACGGGTGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:20578:2077 1:N:0:CGATGT\nCTCAGATTCAATTTGCCTTGCACTACATCTATTCTCAGGCAATGCTCGATACTTGTCAACTTCATACAAGTTGGCCACTTGCTTCTCTTTCATGGAAGCAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:20607:2118 1:N:0:CGATGT\nTTTTATATTTATATAAAAACTATTATTTATATTAGAATAAGATTATATTTTCAAATTCATGATATTCTAAGATATTCTATTCATCAGTAATGTTGATGATT\n>D7DHSVN1:151:D12V0ACXX:8:1101:20616:2168 1:N:0:CGATGT\nCCGTCGTGTTCGGACCCTGTCGCACCATGAGGCGCTGTCGCCGAGTCGGGTTGTTTGGGAATGCCCCCAAGCGGGCGGTAAATTCCGTCCAAGGCTAAATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:20577:2231 1:N:0:CGATGT\nCCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:20990:2014 1:N:0:CGATGT\nCCTCCTTGTGAGGATTATCTCCTTCTTTATGACCTCCAATATTGAGTTTCTCCTGTATCGTGTGAATAATGCCTGCCATTTTTGTGTTTGTTTTAATTTGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:20856:2054 1:N:0:CGATGT\nTCTCAGCACAAATCTCAGCCTTGCACACAATCCTTGTCCTTGCAAGGATCTCGCCATACTCTTCATACAAAGCAGGATCAGAGTCTGTACGATTATCAATG\n>D7DHSVN1:151:D12V0ACXX:8:1101:20967:2118 1:N:0:CGATGT\nCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGGATGCTCTCACTCGAACCCTTCACTGAAGATCAAGGTCGGGCGGCGGTGCACCCACAGGGGAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:20969:2158 1:N:0:CGATGT\nACCGGATTAAACCCACATGAACCAAACCGGGTTCTCCATTGAGCCAAGGACTCGTGCCTCTCGAACCGGTCCACCCCTTCACATGCCACTACATTGCAAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:20982:2239 1:N:0:CGATGT\nGTCCGTACCAGTTCTGAGTCGACTGTTCGACGCCCGGGGAAGGCCCCAAAAGGAGCCGTTCCCAGTCCGTCCCCCGGCCGGCACGCAGCAACCCGCACTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:21175:2092 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAATAAAACAAAGAAGATTGACAACAGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:21165:2213 1:N:0:CGATGT\nCCCGATTCCCTTTCGATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGATCGACTAAACCATGTGAAAGTGCCGTTCACATGGAACT\n>D7DHSVN1:151:D12V0ACXX:8:1101:21082:2225 1:N:0:CGATGT\nCCTATCTCATTCCTCGGGCCATTTGTTTGACCTTGTTCAGGGGATCGACTGCATCTCTGATGATTACTACACCTTCAGGGCGCAGAATTCGGTCCATTTCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:21359:2032 1:N:0:CGATGT\nGTTCTACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTACGTTATCTTTTAACAGATGTGCGGCCCCAGCCAAACTCCCCACCTGAAAATGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:21318:2062 1:N:0:CGATGT\nGTGTTTTCCTTACATTGTCAGGAGTAAAACTATTGTTTTGCGGAGGAACACTTGTGGCTTTCCTGGCAGAAAGTCGCAATGTCATACAAGCATAGAAATCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:21283:2071 1:N:0:CGATGT\nTTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:21330:2113 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTTTGCTTTTAACAAAAGTGAGATATTTTATTGTACCGAGAACAGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:21259:2196 1:N:0:CGATGT\nCTACCACATCAGAATGGGGTGGTGGTGGAGGTGGTGGTGGAGATGAAGGGAGAGCATCCTGAATCTGCTCCGGCTGTGTATCTGGTGGTTGACCAATTGAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:21383:2211 1:N:0:CGNTGT\nCTAGGAGTATAATAACCATAACACAAACCATAATTTAAGATGTGCCACAATTTGCACAAGTTCTATGTACATTGCAATAAGAAAGAACCAATCGAAACATC\n>D7DHSVN1:151:D12V0ACXX:8:1101:21345:2221 1:N:0:CGATGT\nTCCAGCAAGAAGCAGAAGGTATTGAACATGTCGACCAAGTAGAAATATAGCATAATATCGATCATTCAATCTTTGGACGGCTACAATATGATCTCCTCTTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:21377:2241 1:N:0:CGNTGT\nAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGTTGACGGCAACGTTAGGGAGTCCGGAGATGTCGGCGGGGGGCTAGGGGAGAGTTATATTTTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:1376:2265 1:N:0:CGATGT\nGGAATGTAGCATGCTCATCGGGTCCTGCACAATATTTGCAACCAACGGCTTTGCAGTCCGCGTCAAATAAGCATCGGACTATGGTTTCAGGGCATGTTATA\n>D7DHSVN1:151:D12V0ACXX:8:1101:1418:2308 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAACAAGATAAGTGAATGCGCTTTGCGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:1340:2313 1:N:0:NGATGT\nCTTGAACCGATGNCCACTTAGAACATATTCCACANTGGCAGGAAGCCTCCTACTACGTTGCAAAAATGGCAAAAAGTCTTTCGTCTTCTTTGCTGATGCTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:1416:2391 1:N:0:CGATGT\nCTAGGAGAAACAACTCCGGTTGAAAGGAGAAACATGGAAGGCCTGATAATCGAGCAGTATTTCGCCTCTCTGAAACTTCTATTTTGTGGTCCTAAACCTAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:1465:2404 1:N:0:CGATGT\nCTTTGCAACCGCTCCTCGAACAGCTTCACCCAACTTAACCGCCTTTTTCCTCATCTCGAACCCTTCATCTGACATCATCAATGTCCTCACCGCATTCTCTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:1722:2250 1:N:0:CGAGGT\nGTCGTCAGCCAACGTGAGAGTGTCAAAAACGATAAACCAACCATCAGCATGAGCCTGTCGCATTGCATTCATCAAACGCTGAATAGCAAAGCCTCTACGCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:1618:2272 1:N:0:CGATGT\nCTCATCACCAGCAGGCCATTTACACAACCTAACAATCCCACACTTTATTGAATTCCAAATTTGCCCTTCCCTCTCTTTCTTCCTAATTTCTCTCTCTTCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:1610:2301 1:N:0:CGATGT\nGACTTTTTACCTTATTAGCAATGGTTTATGAAACAAATCCATTTCGATTAAGCAAAGTCTATTATACCAAAACGCAGCCTCTTCACAGGTGCTTAAGCCTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:1646:2427 1:N:0:CGATGT\nCAAAAAATGGGGCTGTGCCCCGCCTCCGACTCACGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGAAGCTCCCACTTATGCTACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:1624:2439 1:N:0:CGATGT\nCCACCATTGACGGATAGATTCAAGTATTTGAGCTCGGTGAGGTCTTTGAGGTCTGATGGAATGGTGAACTGACGAGTACTGGATCCAGCAGGGTCTAGTCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:1880:2270 1:N:0:CGATGT\nGCTTCTTCTACTGTTCCCCAATCAGTGCTGTAAACTAGTAAATATCCTTAAAATTAAACTGTAACTCTGATATCATCACAAATTCAAAACAGCAACGTCTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:1755:2270 1:N:0:CGATGT\nCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAATCGACTGTTCGACGCCCGGGGAAGGCCCCAAAAGGAGCCGTTCCCAGTCCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:1877:2290 1:N:0:CGATGT\nCCTTCTTGTGATATAGTTGCCGGATTCCAACAATTTGGAGTTATACTCTGCAAAAAACCAATCATAATTCTTTGAAAGAAATTCAGAAACCGTGGATTTGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:1838:2296 1:N:0:CGATGT\nAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:1926:2308 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAACGTCACTGGTTACCATCCACCACACTCCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:1832:2325 1:N:0:CGATGT\nGTCATTAACAATACCTAAATCACTACTCTCTTCGTTCGATTCAAGCTCTTCCGACTCCGATTGACACCTCGCCACTTGAAGAAAGGGAGAAGCGAGAAGGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:1920:2377 1:N:0:CGATGT\nTTCACATTCCTCACTCTCTTCTCTCTCAGTCTTAAGCTTACATTATGGGTAAGGAAAAGGTTCACATTAACATTGTGGTCATTGGTCATGTCGACTCTGGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:1952:2406 1:N:0:CGATGT\nCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGCTTAGGGCTGCATTCCCAAACAACCCGACTCGGCGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:1825:2463 1:N:0:CGATGT\nCTCTGATACAAGTCATCTACAGTCATTTTCCTTGAGTGAAGGCATTCCTACTAGGTTTCTTTTGACTTCTCTCATGTGAAACAGCAGGCATCTTTGATATC\n>D7DHSVN1:151:D12V0ACXX:8:1101:1970:2464 1:N:0:CGATGT\nCTGGAATTCACAGTTAACCTGTGAACTGGGAAACTCTTAGCAGAGTCATCCACAAGGCTGATGATACACATTTTAAGACCCAGATAAGGCTTTTGCTACAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:2008:2273 1:N:0:CGATGT\nCCGATCAATATTATCAGTAGCCCTCCGAATCGCATGAGTCCGTATCTGGGTGGGGCGCATAGCAGTTTCAAGAGCAGAAAGACGGTGATCAAAAGACCCCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2231:2296 1:N:0:CGATGT\nGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAACATAAGAAAACGCAAGAACTCACGACCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:2218:2416 1:N:0:CGATGT\nCTAGAGTGGGCCCAGCATATGCTGGTAGGCCCCACCCGTAATCCAAGTACTCAAGAGTACATCCACCTCTAGTTATATCCGATACTATAAAGTTTCGGGTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:2109:2446 1:N:0:CGATGT\nCTTCAATTGAAAACCATGACTTCCAATCTTCTTCTTCATAGATGATCACATGTTTGAGCTTCGAAACGATCCGAGAGCCTTAACAACAGTTGCTCGTAGCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2035:2476 1:N:0:CGATGT\nCCGTCACCCGTCACCACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCGCAAAGGCCGTGCGATCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:2266:2251 1:N:0:CGATGT\nTACAAAACCATCCTAGATAGCTCGTCCGAATGCAGTTCCGTCACCTGCACTTCTAACCGGTAACCTGAAGTGAAGATGTGTACAAGCCAAATCCAGCAGCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:2330:2272 1:N:0:CGATGT\nACAGCATTCAATTGAGAGGATACATTAAATAGGCTTTATTAGTATTTGTAACCCTTTTCGAACAAGCTCTCAGAAGCTGCACTGATAGCAGGAGTTGCACC\n>D7DHSVN1:151:D12V0ACXX:8:1101:2332:2309 1:N:0:CGATGT\nGTAACAGATTGCTGATAAAGCACACCACCAGCAATAGTAAGGAGAAGACAGACCAACCCAATAGGACTAGCATGTTTATCCCAAATAAACACATTAATAAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:2278:2356 1:N:0:CGATGT\nCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGCTTGGGGCTGCATTCCCAAACAACCCGACTCGGCGACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2290:2383 1:N:0:CGATGT\nGTGGAAACAACGCTGAAAGTTTCAACATTGAAACCTACGCTCAGAGAATGAAAGAGGATGATGAAAAGCGGCGCTTGTTCTGGGAAAAAGGACCCGATGTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2326:2404 1:N:0:CGATGT\nGTTTCTGTAGAAGTTTATCCTCTTGTAATCTTGTAGGCCTTGTGGAAGTGTGACATTTCCTGGATCATCCATCCCTGTAATTCACATTTGAATTTATTACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2416:2417 1:N:0:CGATGT\nGGGATTTCAAAATAGAAACTTCACAAACACGGTACCTACCTCCATATAGGTCGTAGTCATATATATGTTGCAGAGATTAGGACTTGCAAAATGCACGTAGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:2378:2439 1:N:0:CGATGT\nATACAAACATAGTTTCAAGGAGATAGGTGAGAGATCAAACTCACTCAACTCCCACCAAAGCCAACCTCTGAAACCTCCATATCCGAACGGTTTAAGTTGGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2453:2476 1:N:0:CGATGT\nGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2477:2484 1:N:0:CGATGT\nCTAACGTTGCCGTCAACCGCCACGTCCCAGTTCAGGAATTTTAACCCGATTCCCTTTCGATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:2261:2492 1:N:0:CGATGT\nGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:2528:2373 1:N:0:CGATGT\nCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2623:2391 1:N:0:CGATGT\nTTGGTCTCGAAAATGAAAAGATTCTATAAAGCCTGGGGAAAAACCTCCAAGTATCGGCAGCATCAATAAGACATGTCAAAACAGATGCTAATAGCAACAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:2739:2393 1:N:0:CGATGT\nCCCATGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2515:2434 1:N:0:CGATGT\nTCAGAACTTGAACTTGCCGCCGATGTAAATGCGGCGCGAGCCGGTTTCGTAGCGGAACGGCAATTCGGGGAATTGCAGATAGGCCGACTGATCCGACTGAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:2532:2435 1:N:0:CGATGT\nCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2563:2450 1:N:0:CGATGT\nCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2822:2327 1:N:0:CGATGT\nTCTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGATGCTCGCGCAGTCGCACTATCGGACGGGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:2846:2359 1:N:0:CGATGT\nGCTGAATTGAAGGCTGTTCAACAAATGAGTGAGTAGAAGCTTACGGTGAAGCGTGGACTCAGAAGTTGTGGTGTCTTTGCTCCTTCATAATCCCACAATCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:2897:2365 1:N:0:CGATGT\nCGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2997:2373 1:N:0:CGATGT\nCCGACGGCCGGGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:2976:2376 1:N:0:CGATGT\nGTCCAGCCTCACGCGGTGCCCTCCTCTTTAGGGAACAGGTAACCCACCCCTACGAGCAAGTCACCTGAACCAACTCTCTACTTGGAGAGGGCAGGCAAGTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2825:2413 1:N:0:CGATGT\nCCCAAGTCCCCTGGAAAGGGGCGCCAGAGAGGGTGAGAGCCCCGTCGTGTTCGGACCCTGTCGCACCATGAGGCGCTGTCGCCGAGTCGGGTTGTTTGGGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:2952:2414 1:N:0:CGATGT\nGGACAAGGAAACGATAACGACGAAATGAAGATACCAATGCCACATTAAATGTAAACTGAAATACAGGCCTAAATAACGACGACCTGAAAAAGAGTGTCATT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3193:2270 1:N:0:CGATGT\nCGTGGCTTTGACCAGTTTATGAATCTGGTGATCGACAACACTGTAGAAGTAAGCGGCAATGATAAAACAGATATCGGCATGGTGGTAATTAGAGGAAACAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:3037:2281 1:N:0:CGATGT\nCATCCGAGTAGCAAGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3118:2325 1:N:0:CGATGT\nCCAAAGTACACAAACTTGAATTTACATCACCCATTTTTTTCCGATCTCCCAAACACAACACTAGAAGAACAACTCATTAAGAAACCACTTGTCGAAAAAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3233:2354 1:N:0:CGATGT\nCTAGCCAATCCATGAGTATACCATGAAGTTACAAAGGTTGTACCTGTAAACCAACCTCCTACAGCGAAATAAGCACAAGGAAAGAGCAATAGACCAGACCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3199:2358 1:N:0:CGATGT\nCCTGGTTCAGGAATTTTAACCCGATTCCCTTTCGAAGCTCGCGCGGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGATCGACTAACCCATGTGCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3217:2390 1:N:0:CGATGT\nTCCAGAAGAATATTTCAAAACACGAAGGAAAGCTTTTGTCCGTTGAGTCTTCTGTTTTGTGCAAATAGCGAGAACCCTAGGTTTAGCCATTTGTTTGCCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3113:2415 1:N:0:CGATGT\nCAAGACGATTCAGTTTACGCTTCGACATCACTGTGTTTGTAACATTCAACCGTGAGTACTCCCAAACATAAGGCATGTACAAGTCAAGCGCGTGAAGCAAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3006:2420 1:N:0:CGATGT\nGAAAGACGCATGAGACATTCGCCTTTAGACTCATCCGAGGTTCCTTTGTTAGCTTCAGCAACTTCACGCTCAAAACCAACGATGATGTCACGGTCGCACCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3131:2427 1:N:0:CGATGT\nGTCCGTACCAGTTCTGAGTCGACTGTTCGACGGCCGGGGAAGGCCCCAAAAGGAGCCGTTCCCAGTCCGTCCCCCTGCCGGCACGCAGCAACCCCCGCCCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3193:2429 1:N:0:CGATGT\nGTCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCTTGCGGATGTTAACGCAATGTGAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3246:2435 1:N:0:CGATGT\nTCATCTTGATCATCTCTACCCCTAGAACGCCTATCACGATCATCATACCTACTTCCATGCCTTCCATCATGCCTAGTCTTGTCCAAGTCCCTATCTTTGTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3191:2487 1:N:0:CGATGT\nCTTGTTGTCGGGATCATTAGGGGCAAGGAAACGATTGCCTTGGCTGTTAATGGTAGGTTGTGCACTTCCTCCAATAGCATACATTTCCCAATGTGTATAGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3290:2253 1:N:0:CGATGT\nCTAGGATGTGGACTAGGGTTCGGGTAATTGGGCTGAGCATATGGACCAGGATACTGATATTCAGGCTGCAGATACGGGTATGGATGTGATTCAGGATATGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:3302:2341 1:N:0:CGATGT\nTCCTGCGACTGTGTTGCTGCTCTCCATTGACCTCTTCTTTCAGAAAATATCTTGTTATGCGCAGCAGAGCCTCCATACTGATGAGCAAGGGTGTCTCCCAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3312:2355 1:N:0:CGATGT\nTAACAAGTTAGGGTTTTTCCCCAAGAAATGACCCCACCATCTCAATATTAAGATGTGGTAGTGAAATGCATCTTCTTCATCCCCATCTGAGAATGGCCGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3481:2418 1:N:0:CGATGT\nCTCCATTTCAACACAGTAACTACTTCAATTACCAAAGTAATAATCAAATCACACTTTTAATGTCTTTTTCTAGTAAGATCAGATCAAAAATACACCACCAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3387:2436 1:N:0:CGATGT\nCGGCCGGTGCCCTTGGCGGGTTTAATGCGCACGCCGATGGGGATGAACATTGTTTCTAAAGGCGGCCAAAATGTGCTGGAATTTCTCGAAAACGATTTCCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3265:2445 1:N:0:CGATGT\nCGATCGGCAAGATGTCGGTGTCGCTGCCGCCGAAAGCCGCATGGGCGGCCTTAGCCATGCCCAAAAATTCGTCGATCTCTGGTGCAGTGAAATCGTAAGAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3480:2490 1:N:0:CGATGT\nCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGCGTCCTAAAAGTAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGCATCTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:3743:2251 1:N:0:CGATGT\nCTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3619:2252 1:N:0:CGATGT\nCTGAGAAGTAGTCTAGTCTGATGTGATATTGAAGCGGTTTTTTAGTTTTATTTAGTTTCTTCAGGCTTGTCATATTGCTTCTCTTAGTTTAACGCTTCAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3659:2297 1:N:0:CGATGT\nATTTGAATATCCCTGAGAGAAGGTCGAGAGGGATGAGGTGGAGTTTGTGAAGAAGCCCAAGGAGGCGTGTTTTTGTCTCCATCCGCAAGTTGCAAAGAAGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:3638:2340 1:N:0:CGATGT\nGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3509:2355 1:N:0:CGATGT\nCAACTTTTTATTAAATGCTCCTATTCATTATAAGGCGGGTTACAAGTCTCTTGTTTCCGTCTTCCATCTGTTGCTTCGCTAGTGCACCTTAGAACAGTCGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:3587:2403 1:N:0:CGATGT\nCGGAGTTCCAACCATGTAGAATGAGTAGAAGTTGATTCCTGCACCAATGCTCGGCCTTGCAGTCCCACGAAGAACACCACAACCGGTTGTTTGTGGGCAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3750:2409 1:N:0:CGATGT\nCGCTCTTTTATTGAAATAGATAAATAAACATAAATATTTAATTAGACACATTTAGCAGGTTCCCATGACCATGCAGCACACATTTTGCTACAACATTCTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3709:2445 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAATCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAATTGTGCTTAACCTGTTATCTTGTCTTTATT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3670:2460 1:N:0:CGATGT\nAGCCAGTCAAGTCCCTCGTACAAACCTTCACCAGATGTAGCACAAGTGCTTTGGATATACCAATGGCGCTGACGAAGGGAGTGGAGACCAAGCTTATCAGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3748:2479 1:N:0:CGATGT\nGTCCTTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3844:2256 1:N:0:CGATGT\nCCGAGACATCTAAAGAAGTTGAATTAAGATTGACACCGGCACTTGATATGACTAGAGTGAGGGATAAGAAGGACAGAGGGACTGTAACACTCAAGGTGTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:3827:2266 1:N:0:CGATGT\nGACCCGACTCGGCGACAGGTGGCCTAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:3883:2281 1:N:0:CGATGT\nCACCCGATTAACATCCCTATCAGATTCATCATGTGATGACGAACTCGAATCCATTGACAATATAGTTGATGGATGATAATTCTCAATAGACAAGGTTGTCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3843:2338 1:N:0:CGATGT\nTTGAAAGTGTTCCCAAAGGAGATGCTATCTTCATGAAGTGGATCCTACATGACTGGAGCGACGATCATTGCCTGACATTGTTGAAGAACTGCTACAAGGCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3904:2388 1:N:0:CGATGT\nAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAAGAACCAACAAAACAACAGGGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3949:2430 1:N:0:CGATGT\nTGGTAGTAGCCGCTCTGGTTGGAAGTCCGGTGACTGGATTTGCACTAGGTCGGGATGCAACGAGCACAACTTCGCAAACAGGATGGAGTGCTTTAGATGCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:3993:2446 1:N:0:CGATGT\nCTCTGCCTGTTCTCCATTAAATAAACACGACCGAGAATTACTCAAATCGGTCAAAAATCGAGTAATCGGGAACGGAACTCGAAGACGACGACGATGAAGTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:3954:2451 1:N:0:CGATGT\nCCGAGACATGGAATGTTCAGTTATTTAGATCCATTGATGGTGGTGCTGCTTTTGATTTTCCCGATACTCCTGAAAAAGCGGCCGAAGCTGGGCTTGTCAGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4202:2276 1:N:0:CGATGT\nCTGGGTACTTGACATCGAAGATGCTTCTTGACAACCCCGATGCTGCATCTTCACTGGCGTGGGATGAGGACCATGAACTGCTTGAGAAGTGTGTTTGCGCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4042:2302 1:N:0:CGATGT\nATTCTCCATCTTTACAAGTTACAACACATATTGACTTATTAATGAAAACCCCATCTCACCTCTCCTCCTATTTCTGCTCAACATAACAAATCTCTTGTCTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4238:2303 1:N:0:CGATGT\nCTTTCCTTGACTCGTTCCAGAACTAAGAGTGACATTAGTAATAGGTTTGGTAGTTAGAATAGGAGTAGAATCACCATCCAAGATTCTTTGAATATAAGGAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4129:2322 1:N:0:CGATGT\nGGGGATTTGAATTTTTGGATTTTGAATTTTTGATCGTTGATGGTCTTTTTTTTTTTTTTTTTTTTGGGGAAGAAGAGAAAAAATAAAAAGGGGGAGATTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4224:2335 1:N:0:CGATGT\nTTTCCCTGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4191:2372 1:N:0:CGATGT\nCTTAGTAACCAAGTCCTTGGTTCTGTACCAGTCACCACGTTTCATAGCACCTTTAAGAAAGGGGTCATGAAGACCATACAAATTGGTGAAAATGCGATCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4017:2377 1:N:0:CGATGT\nCTACTGACCCTTTAACACTATCACCATGCTGTGACCATCCATCATTAATAAGCTTGAACGCTTCATTTCGTGACAAAAACGACGCAAAAAAGTGCTTCTTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4082:2386 1:N:0:CGATGT\nGTCGTCTGCAAAGGATTCAACCCGCCGCTCGGTAGAATTGTGATTCAGAGCGGCCCTCACGGTGCATCCACCGCGATGGCTTGGCCCACGACACGTGCCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4057:2388 1:N:0:CGATGT\nCAGTGATCCTATATCTTTTTCAAGAAAGCAAGCACGCGCAGATGAAATGGTATGGGCATCCAGGGAAGCTTTGAGTGAGAGACATTCTGAAGGAATCCATG\n>D7DHSVN1:151:D12V0ACXX:8:1101:4124:2406 1:N:0:CGATGT\nCTCCATATCGATACTAAGCTTTGTTTTTGGCTCCAGCCAAAACCAGCAGTTCAATCATAACCCAGAAATATAGATACATAGCAATATGATCAATCCAACCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4218:2452 1:N:0:CGATGT\nGCGACCAGAAAGACATTTCCGAGTACAATAAAAGTTGTTGCAACAAGTACCTTGACAGAGACTTTTTTGTTCAAAACAAAGTATGCAAATGCGATGTTCGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4317:2277 1:N:0:CGATGT\nATAAAAGAGCTCCCGCGCCGATTAGTATATAGTACAATGTGAGTGAACATAGCACACTGCCTAAACACCTAAAAAAAGAAAAAAGGAAAAAAAAAAAAAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4385:2356 1:N:0:CGATGT\nGGCATAATTCATCATTAGTAGTCCGTGCTCTCTACAAACATCAGCCAACGTCAATGTACCGGCAACATTGGTTCGGATTGTCTCTGTTTTGTGAGACTCAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4425:2415 1:N:0:CGATGT\nGGGGTCGTCAAGGCTGAACCCGGATGTGAGCAACGCAGTCTCAAACAGAAGCAGCACTAAATCCTTTACAGATTTGTCATTCTTGTCGGCATCTGCTCTCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4454:2421 1:N:0:CGATGT\nCTACAATCCAAAGGTTTACATAGCCCAAAGTCCGATAATCTCAAGTGTCCATGTTTATCAAGTAGCAAGTTATCGGGCTTAATATCTCTATGAATATAGTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4349:2434 1:N:0:CGATGT\nCGGTCTTGTTCAACGCAATGGCGACTGCAGCGACGAATGCCACCACACAAACAACTGAGACACCTATAATCACACCTTTGTTAGCCATTTTTTTTCCCTTT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4314:2435 1:N:0:CGATGT\nCACTTACAATACCCCGTCGCATATTTAAGTCGTCTGCAAAGGATTCAACCCGCCGCTCGGTAGAATTGTGATTCAGAGCGGCCCTCACGGTGCATCCACCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:4391:2456 1:N:0:CGATGT\nGACGGGCGTGGCTAAGGAGCTCAGCGGAGTAGGCTGGGTTAGAGCGTTGGAAAACGATGGAAGCAGCGGCCATAGCGGCAGCAGTTTCTCCGGCAAGATCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4384:2471 1:N:0:CGATGT\nTCCGTCTTTCTTCACCTCTCGATTGGCCAAGCAGAAGAATGTCAAGTAGTTCCTTGGATCCTCTTCAATCCCCTTAGCCTGCAAAGCAGCAATAACATCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4526:2273 1:N:0:CGATGT\nAATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCTGCTTGGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4596:2310 1:N:0:CGATGT\nGCCGCGCCCTCCTACTCATCGGGGCCTGGTACTTGCCCCGACGGCCGGGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4707:2313 1:N:0:CGATGT\nTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:4612:2332 1:N:0:CGATGT\nGATTGATTGCCGTTATGCAAATGTTGTTCAAGTGGGGGCAAATGTGTTACCTTTGTTAGCTTACGTAAGTGTCATAGAGGGTTTTTGTTTTCGCTTGTTTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:4691:2344 1:N:0:CGATGT\nGCTCTGGTAAAGAAGGGAAGTTTTCAACAAATACCTTCAGAAGAGGTGAACTTATGCAATAGACCTAATATTACACATATTTATAAAGGCTATAAATGACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4622:2358 1:N:0:CGATGT\nTGAAGGACTCACACCAATCATGATAAACTCCGATCAAGCCCCGGTCAAAAATCACAGAAAGAGTGTCTGCTTCATGTATCGGAACAATGTTCATGACCCAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:4737:2419 1:N:0:CGATGT\nCTGAGTAGGAAAGTAACGGATGACATTAGCAGTGTTCCCTCTCCACAAGGACATCATACCTTCATCCTTAATGGTGCTTCCAAAACACTCACCAATGCCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4515:2485 1:N:0:CGATGT\nGCGGCCTTCAGGGTAGAGTAATTTGGGTTTCCAAGAATAGTAGAAGGAAGGGTGTAGAAGCTGCAGAAATCGGTAATCTCATGAGTCACTGGACTTTCAAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4654:2489 1:N:0:CGATGT\nCCAAGATCTGCACCGACAGCCGCTCCGCCCAGGCTCACGCCACAGGTTTTGCGGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGTACTTGCCCCAAC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4846:2295 1:N:0:CGATGT\nCATAACCTTGGCCAGGTTGACGGAGGCAGAAACCCGAACAACAGTACGGTGGGCCCACGTTCTCGTTACATCTTCCTCCATTCCCTATGCATGCTTCTGTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4924:2299 1:N:0:CGATGT\nCTTGTTACGACTTCTCCTTCCTCTAAGTGATAAGGTTCAGTGGACTTCTCGCGACGTCGCCGGCGGCGAACCGCCCACGTCGCCGCGATCCGAACACTTCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4941:2348 1:N:0:CGATGT\nACTCGGAATTTGGCATTGGAGTGGCATGGAGGGGTTATATTAAACATAAGCGCTACCTTACACTACACCGCTTCTTGGTATCAAATCCACGTATCGGCCGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4977:2395 1:N:0:CGATGT\nCTCATTTGCACACAAAGGCGACGTAATCTCCGGGCTAGACTCAGGAGAAACCGAAGGGTAAATCTTATCACTAACCATTTTACTCACTTTAGAACAAAACC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4834:2400 1:N:0:CGATAT\nCTTGTCTTGGATTTTCGCCTTGACATTATCGATGGTATCAGAACTCTCAACTTCCAGAGTAATAGTCTTCCCAGTCAAAGTCTTAACGAAGATTTGCATTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:4752:2403 1:N:0:CGATGT\nGTAGGGCATATCCTTCGTAGATAGGAACAGTGTGACTCACACCATCACCAGAGTCAAGCACGATACCTGTTGTACGACCACTAGCATAGAGAGAAAGCACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4958:2412 1:N:0:CGATGT\nCCCAAATCAGGGCTAGGAGCTTTTATATCTCCAGGAACTTCAAATGTCACAGTTCCATCCCTTTCAACAGATGCAAGTCGGTTCAGCCACTTGATCTTCCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:4799:2439 1:N:0:CGATGT\nGTACTCTGCTGGTTTGCCAAGCCCAAATGGGTCAAACCCATAAACACCAACTAGGCTCCCATCTAACCACTCTGGAGCCTTGGCTCCTGGATACCATAATG\n>D7DHSVN1:151:D12V0ACXX:8:1101:4989:2442 1:N:0:CGATGT\nGGTTAAGCTATTAGATATCGGAGGGTGAATGTGATGGCAAAAAGATAATAGAAAGTGCAAGTAGTTTAATGTCATTTTAATCCTTACCCTCTCAAATGTTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4787:2455 1:N:0:CGATGT\nATGGCTGGAGGCTTTGGAAAACTCCAATAACTTCCCCAGTCTCAGGCTTGCTACTAGTAACACTCAAAGTGATCATCCCTTTCGACGAGGGAGTATTCTTA\n>D7DHSVN1:151:D12V0ACXX:8:1101:4915:2462 1:N:0:CGATGT\nGCATTTATCAACAAGCATCCACTCTCCATTAGGCCGTTGATCGCCTTCATAATATTTCTCACTGGACTCGGGATGAATCTCATGCTTGGATCCATCAATCG\n>D7DHSVN1:151:D12V0ACXX:8:1101:5225:2314 1:N:0:CGATGT\nCTCCAAATCACCCATTTCAGTAAAACAAACATTTATATTCTCTTTTCAAAACGAAAAGTAGAAGCATCACAAACAAAGAACCAACACCAGCATCAATCACA\n>D7DHSVN1:151:D12V0ACXX:8:1101:5079:2459 1:N:0:CGATGT\nTGCGGCGATGACGTGATCGTAGGGGGGGGGTCGGAGAAGCTGGGGGATCGGAGGATGGAGAGGACTAGAGATGAGAGCTCGTAGAAAACCCTAGAAGATTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:5111:2465 1:N:0:CGATGT\nTGAGGAATCATGCTGGATAGAGGGCTTGGTGGATCCAAGACTAGAAGGAAGATTTAGCACGAAACAAGCTGCGCTGATGATCCAGGTAGGAATATCTTGTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:5184:2480 1:N:0:CGATGT\nAGAAAATCGGGTTTTAAATATATGCAAAGATTAAATGATCTGAGTTTTAGGCCTTAATCTTGAATAGACTCGTACCTGCATTCTCAAATTCTATGGTCAAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:5205:2482 1:N:0:CGATGT\nTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCT\n>D7DHSVN1:151:D12V0ACXX:8:1101:5307:2255 1:N:0:CGATAT\nCTCCTTGAACACGATTCGCCAAATCAAATCTCGAACGGCTCTGATCATGACACGTGGATAACCCATCAACTCGATCAAGCAATCGGACGGTGTAGCTAGGG\n>D7DHSVN1:151:D12V0ACXX:8:1101:5383:2265 1:N:0:CGATGT\nGCGTGATCAGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTAGACCCTACCTCC\n>D7DHSVN1:151:D12V0ACXX:8:1101:5333:2280 1:N:0:CGATGT\nTCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAACTAAGGCCAGGAGC\n>D7DHSVN1:151:D12V0ACXX:8:1101:5391:2288 1:N:0:CGATGT\nAAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACATCTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCAGGAATTTTAACCCAAT\n>D7DHSVN1:151:D12V0ACXX:8:1101:5436:2326 1:N:0:CGATGT\nCCGCTGAATTTTGCAGCCTAATTGTCCTTGTTGTGTTTATCATTCCGTAGTGGTACGATCCCTGTGGATTCGGCCTTGGTCCACTTGCAGTAAGATTGGTC\n>D7DHSVN1:151:D12V0ACXX:8:1101:5342:2338 1:N:0:CGATGT\nCCTTTGTGGGATCTAGGTTAGCGCGCAGTTGGGCACCGTAACTCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAAATGGCCCACTTGGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:5424:2351 1:N:0:CGATGT\nTTCTGTTGTTGCACCTGCATGTTTTGATTCCCCACAACCCATTTTCCCTAATATACTTAGAATTAATTTGATGGATGTATGAAAAGAGGGAGAAAGAATGA\n>D7DHSVN1:151:D12V0ACXX:8:1101:5263:2387 1:N:0:CGATGT\nGCTGGCACAGCAGCGCTAGTATCTGGAGCAGATGCTGTTAATAAAGACACTGGAGAAAGACTGATAGTCGGAAGGTGGGTAGTGGATAGCATAGATCGGAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:5423:2419 1:N:0:CGATGT\nGCAGAACGTTACGTCCTTTCAGATCAATGAAATAAAGAGTTTCAGGGTTAATTGAGATGAACGCTTTGATGATACTAACATGGCCTCCGCTAACAGCTTTG\n>D7DHSVN1:151:D12V0ACXX:8:1101:5374:2435 1:N:0:CGATGT\nCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGGTCGACTAACCCATG\n>D7DHSVN1:151:D12V0ACXX:8:1101:5392:2436 1:N:0:CGATGT\nCGAGAAAGTACAATTCATTTGATGTTTGAAGCAGATTTTTGACCTAAAGCTGCACATAAATACTAACTAGCTTCTGAACAAAAAGGGAAACATGAACGAAA\n>D7DHSVN1:151:D12V0ACXX:8:1101:5319:2459 1:N:0:CGATGT\nCTTTACTAAAAAATTCTTCCTCGGAAACAAGTTGAATGTCAGGGTACTTTGACTTGAAATCTTTGCATGCTTTTATAGCTTTGAGGTAGTGGCTCTTCTCA\n>D7DHSVN1:151:D12V0ACXX:8:1101:5351:2460 1:N:0:CGATGT\nGGTTGATATCATCAGTGGGCAATCTTGCTGCTCCTTTTGAGGAATGGACTGCTGGTGGAACAGCCCTGACTGCACTGATGGATGTTGAAAGAAGACACGGT\n>D7DHSVN1:151:D12V0ACXX:8:1101:5252:2479 1:N:0:CGATGT\nTCCAATAACCTTCCTAATGTTGTTGATCATATAAATGAGAGCAGTGGCAAACTCACGATCTGCTTTCTTTGACATTTGCAGATTAATTTGCGAGCCACTAG\n>D7DHSVN1:151:D12V0ACXX:8:1101:5285:2496 1:N:0:CGATGT\nCCTATGTCCATGTTGAGTTATTGAAGCTGCAACATTTCTGTTATTATAATTAGGTGATCGATGAATCATATTTCCCCCTCCTCCACCCTTTCCGCCGCCAT\n' + if not check_individual_results(cm, t): + res = False + print_success(res) + return res + elif name == "pxs2nex": + res = True + print("fasta ", end = '') + cm = "./pxs2nex -s TEST/test.fa" + t = '#NEXUS\nBEGIN DATA;\n\tDIMENSIONS NTAX=5 NCHAR=20;\n\tFORMAT DATATYPE=DNA GAP=- MISSING=?;\n\tMATRIX\n\nTaxonA\tAAATTTCCCTGTCCCTTTAA\nTaxonB\tGCTCGAGGGGCCCCAAGACC\nTaxonC\tACGCTCCCCCTTAAAAATGA\nTaxonD\tTCCTTGTTCAACTCCGGTGG\nTaxonE\tTTACTATTCCCCCCCGCCGG\n;\nend;\n' + if not check_individual_results(cm, t): + res = False + print("phylip ", end = '') + cm = "./pxs2nex -s TEST/morph_data/morph.phy" + t = '#NEXUS\nBEGIN DATA;\n DIMENSIONS NTAX=64 NCHAR=437;\n FORMAT DATATYPE=STANDARD SYMBOLS="0123456" GAP=- MISSING=?;\n MATRIX\n\nErythrosuchus 0001000000000210010101000000100000000100010000?00000000000000?00?000?0010010000000000010000?001??00000??0011?000002000000000000000000000?000?00??000000?00?00001?000001000000000000?010000?0000010000?00000000?000010000001?00000000???100000000000000000000000000000000001100???010000???????0?0000?00000?00200000??0000000000000000000111111111112?00?000000?10??000000???01000?0?0000?0000?00?0000?100000?0?0????00000000?01??10??0101001000000000\nEuparkeria 000001001000021000000100000110010000000000000000000000000000000000000000?01000000000100000000000000000000000?0000020000000000000000000?0?0000001000000?000??00000000000000000000000000000000001000000?0000000??0000100000?0?000000000011000000000000000000000000030000001003000?001000101231120100001000000?000010022000000000001000?000211111111112?00?0000001000?000000??001000?0??00000000000?0000?1000000000???000000100?000010??0000001?00000000\nPROTEROCHAMPSIDAE 1000000000000001000000100000000000020000000000000010000000100???0?????00000000000000000000000001000000000000?0000020000000000000000000?0????000000?000??00?00000000000000000000?000000100000001000000?00?00000?00000000000000?111000001100000010000000000000000203000000?0?0001??01000001231120100001000000002??00?22000000000001?000000011111111112????0000001001?000000???01000?0??0000000?0?000000?1000000000????10000000?????10??00?0001001000000\nScleromochlus 101012?0100000?00000110000001??00000?0??01000???00?2???????????1??????01????0000??00???2??00??02210000110000?00000200100001???00010000?0?????00?1??100??01?0000??0?00?0?0?????1?011101110000000??0000?0000?000?000000000000000?00?00000000000000000000000?10?00??????????????00??010001?0000000000000000000?0???00?0000000000000??00?000?11111?1111100??0?00?00000?000?00???00000?0??000??0?0?0100001?0000000?????0?10000??0?00??10??????001?01?00000\nEudimorphodon 10001000100000010010?00000?0?0000?0?????00000???0??0??????????????????01????01000??0000200000??222000011000120110021010000000000000000?0????0??010?10100?0?2010???0???????12221?011?01??00011111?111111111111111111210111111?1000000??0100?000100000000??????00??????????????0???010000?000000000000000000??0???000000000??0000?0?01?00021111111311210010000?001??0?00?01?100010??0?0000??000?110000??00000?????021000000??01000000??00?0000?0102?000\nPeteinosaurus ???????????????????????????????????????????????????????????????????????????????????00??10000???22200001100012???0???01??00???00?00000??????????????10?0?00?201????0???????12221?01110101000??????1111?1?111111111112???11111?0????????0????0??????????????????????????????????????1?000?00000000000000000????????0000?????????????0??00???111?11?11?10010?00?001?0000?????1000??????00000?0?0?110?00?????????????210000????0100000???????000?0??????0\nPreondactylus 10?0?0????0000?11010???000?0????00????????????????????????????????????00????0100???00?????00???22200001100012???0???????00???00?00??0??????????????1?????0?201???????????????????11101110001111??1111?1111111111?11?110??110?0?00?00??0100?00010000000???????00??????????????0???01000??000000000000000000???????0000?000??0000???0100002111111131121001??00?001?00?00??1?10?010??0?0?0?0?0?0?110?00???00????????2100000???01000000??0??0000?0102??00\nAustriadactylus 1000?0?01?0001?11010???000?0?00?0??????????00?000000??????????????????????????????????????00???222000011000?2????????????????????????????????????????????????????????????????????11????????111111111?11?10??????????10?11??????00?00??0100?000100000000??????00??10??????????0???01?00??000000000000000000???????0000?000??000????01?00011111111?1121001??????0?????00?0??1???10??0???????????0???0????00000?????2?????0?0???????????0??0000?01???00?\nLagerpeton ???????????????????????????????????????????????????????????????????????????????????00??0????01122????????????00100200000010001010110010001?1000001?10?0101020200?110?1011212221011101011110???????0????????????00000??????????????????????????????????????????????????????????????????0?00000000000000000??????????00???????????????????????????????????0000001001100???????10???????0000????????0?0???????????0????000??????????0000????0???0??20??0\nDromomeron ??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????10010001?0000011111??1010??20??1100101021222????????????????????0??????????????00?????????????????????????????????????????????????????????????????????00000000000000000??????????00????????????????????????????????????????0000???????????1??????????0?????????0?0?????????????????????????????????????0???0???0???\nMarasuchus ?0????????0???????00?1?????????????????????????????????????00021?1??????????112000000000000?0012210000110001?10100200000012002100100000101?1111000111?1001120000?1000101101000101110101111???0????000??010?0???0000000?00??????0??????0?0?????????????????????????????0??0????????1???0?000000000000000000????00?0?00?000?????????????????1111?1?111????0000011000?00???????10????00?000???0?000?0?0????0????000????100???0??????00????0?00??0??000?0\nPseudolagosuchus ???????????????????????????????????????????????????????????????????????????????????????0??0????22????????????????????????1?0?20???0000?0?1?111110??1??1001120001?200010?101000????????????????????0??????????????00?????????????????????????????????????????????????????????????????????00000000000000000??????????00????????????????????????????????????????1100???0???????2??????????0?????????0?0?????????????????????????????????????0???0??20???\nSilesaurus 00?001????00021000000100000?1??0000?????0?0????????0?001??00002001???010000?11200000010200000002201001110000?10000200102012002001101001122?111110010211011000001?2000?11121??????01011111100000???000?0000000??0000000000?0?0?000?000?01000000000??0??????????????????0??0?0?????040000000000000000000000000??0001?0000000?000001001000021222??11222????100001100?0000??1???2000010??000???0???1?0?0???00????000?????0010?00?????00000?00001000021000\nSacisaurus ?0????????0??????00011?????????????????????0??????????????????????????100?????????????????0????22?1????????????0002000000220?2001101000121?1?1110??12110111??????2????????????????????????????0???0?0???00?????0000?0000???????0????????0?0???????????????????????????????????????4?00??000000000000000000?0?????1?00?000??00?????0100????2222211222????0?00?1100???0???????20????0??00???????11?0?0????0??????????????10????????0???????0???0?02100?\nEucoelophysis ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????2?0020???01001?22?1110100??1??????????????????????????????????0??????????000??????????0000?????0???????????????????????????????????????????????????????????????00000000000000000??????????00?????????????????????????????????????00?11?????0????????????????????????????0?0?????????????????????????????????????0???0??2????\nLewisuchus ???????0??????????0011?0????????????????0?000?0?00001?0???0000?10?????00????1120000000?????0???22?1000??0000??????????????????????0001?????????1???0??????????????????????????????1???0???0???0??0000?????000????0??00000?????00??????0?0?0???????0??0??0?????0??3????0??0??1??0??1000010000000000000000000???00?0?00?0?0??00?00??01?000??1111111111????????????????0??01????0????0????????0???0?0?0????0??0?00???????????0????????????0?00??0?0???00\nEoraptor 0010010001000111000011?000?100000012???10100001000000?????????????????????1??1202?00???10000???22100??1100111?0020210002022?021111021????????10?0??1?????1?0000??200????1?1222???0101?1?1?00000000000?0000?0001000010000000000?00000??01000000000000000?0????0???2??????????00???010000?000000000000000000??0????0?0000000?00000??01?000211111?1?111??11??00??10?0?0011111112?00000?000?01121??00010001000000??0?000000001??000000???00?0000?00?0?000\nHerrerasaurus 0000010101000110000001000001100000120101000000000010000100100021011???00001?112020001111000?0022210???110011110020210000022002211102100102?111110001211011100001?200111112122211101011101100000100000?0000000010000100000000000000000001000000000000000100000000020000000013?01??010000?0000000000000000000000???000000000000000100100002111111111111111000001100000011111212100000?00000?12111111211?000000000000000000000?0000001010000000000100000\nCoelophysis 0000010001000101010011000001101000122101000000000000?0010?1000?101????00000?11202010111211000022210001100011110020200102012002101102100112?11111001121101112010??2001?11??1222?1101011101101000100100?0000000011000100000000000000000001000000000000000000000000030000000013?01??0100000000000000000000001000????000000000?10000100100002111111111111111200001100100011111212100100000000112111111101111111111111111111001000000000??0000000001111111\nLiliensternus 00????????0???????0011?000??????????????0?000?1000000?????????????????00??0?11202010011?00000??2210?011?0011??00202001021120021012021????????111000121??11???20??2001111121222???01???????0??00?00100?0000000??0000?00000?0??0?00??0??010000?00??????????????0????????????????????10000?00000000000000000????????0?000?00???0000??01?000??1111111111?????00001100???0??11???21????0??000??12??11?1101??????1???1????????00?0?????000?????00??01111110\nZupaysaurus ?000?101010???????0011?000010010001221010100000000100?????????????????00??0????????????????????22???01???????????????????????????????????????????01???0?111??20??2001111121222??????????????0000001?0???????????????0000???????00000???100000000000000000?00?000?3????????????????1000??000000000000000001??0????0?000?000?10000??01?000??1111111111???1????????????0?11????2?????0????0??1???????101?111111????????????00???????????01?00???011?111?\nPlateosaurus 0000110001000101001011001001100000122100000000000000000100100021011??131000111002000011100000022211001110021100020200002022002100202100111?111010000211011120001?20011111212221110100010110000000000000100000000000100100001000000000101000000000000000000000000000000000000001??040000?000000000000000000000?000100000001?000001000000101222?2111220100200000100000011111112111111111111002000000001000000000000100000111111111111111111000001011000\nPantydraco 0010010101000???00?01?00000100100012010100000010000000010?????????????300?011?20200???????00???22????1110011??00202101000???????12?????1????????0??021??11?00????????????????????01000101?00000?00000?0?00000??0000000100?0???000000000000000000000000000?00?000?????????0??001??0400001000000000000000000000?0001?00000000000001?0000012122???11122????00?0??1000000111?????101?11??11?0002?00??00?1?000000000?????00011111?????1111000000??000?100?\nAntetonitrus ?????????????????????????????????????????????????????????????????????????????1?????0011???0????2200???110011?????????????2??021???021????????1010??0??1??1???????????????????????0100?0?1?0???????0?0?0100?000???00???????????????????0???????????????????????????????????????????????0?00000000000000000?????????000?????????????????????????????????0???00?010?0000??????1????????1???????0?00?0?0????????????????000????1?1110??1?????11111???1??0\nEocursor ?????????????????????????????????????????????????????????????0?0??????00000?01?0???????2???????2210???110001???0202?0102032002001?021????????1??0??12????????????????????????????11???1??????????00?0?00????0?10000???000?0????0??????0???0???????????????????????????????????????4?000?000000000000000000?0?????0?00???????????????1111??221?12??2?1?1?211111211?1???????1??????????00???0?0??1??00???????????????????????0?????00????0?00??0?02???0\nHeterodontosaurus 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0010011110010000011?0000101000001000100110001000??000??0????0000?01000010000010000??01000000000???0000?0???0011??00??00?00?01?0??000??11000110000000000000?0000000??00000000?0?0?10010?00000000000000000000000000?000000000??0?000000000000000????00??000?0000?0??0000?0??0000?0??00?00??000000???0??00000?0????10??00?0001?010000\nQianosuchus 0000101100001011111000??0?0000?0???01000?0?0?0??????????????0?00?110?00??0??00??1000000?1000100??00000?0?????????0???00????01?0?000???0?00?000001010000000?0000000??00000000?0????00000?000000?000000??0??????????0000?00?0??0?000?000000?0?00????000?000?00?001???100?0??00???0??00??01?000001??????00000?0?????0??00?000???10100\nRevuletosaurus 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???????????????10?1?0???????????????????????????????????????00?????0?0?????????????????????????1???0000000010000000?????1???????????????????????????0??0????????????0000?00???????00?0??000?????????????????????????0?0?0????????0??0?????000???????0??????01????????000?????????????00????0????????????????????????????0???0??0??\nBatrachotomus 000110101000?001111?0111000000101010101101100000??100000000110000000010111000?0111?0010010000001000000000000000???0000001?????????0???00??0?00000000000000??000000??00000000?0?0?00000??0000000000000000000000000?0000000?0000?000100000000000????000000??001000???10010??00??00??00?000?00000000?0????00000????10??00010000000000\nBromsgroveia ????????????????????????????????????????????????????????????????????????1?11??11???????01101010???1?0??????000?????????????????????????????????????????0??????0?????00?????????????????????????????????????????????????00?????????????????????????0?0??????0??????????????00??????????????????????0?????????????10??????00???????0\nEffigia 00100010001011010110100011000000110100000000111010?110111??00111110001001111??1101?010?10010111111111010110000?01?1100000010110000?00001011101011000?10000?0000000??0000000000000000100?000000000000?0000000000?1?0000000?0?0000000000001?0000?00?00010000001?00??1000?0?0000?000?100000?100001???00?00010?0????000000100010010100\nFasolasuchus ?0??0????00??001111?0000????????????????????????????????????10??0000000101??0??????????????????1???010?0???10000?0??????10101000000?????????????0000???0????000?????0000000????0??00?0??0000000???????????????????0?00?00????0?0000?00????0000????000??????01???????00?0??????????0??00?00?0????0???????000??????0??0??00?000??000\nLotosaurus 0001100100101100011?100001000010101000000?00000???1000?0????1100000000101110?111??0000010000011????00000?00000001001000000101?0?000?????????????00000100???00?0?00????00000??0?0?000?0??00000000000000000000?00?0?0000?00?0??0?0000000001?0000??????0?00???00000???010?0??000??0???0?000?000000?0?1????01000????0???00?0001?000100\nPoposaurus ??0???????0??????????????????????????????????????????????????????000110011110?111???000010001101001000100000000000?1?000?0101100000????????????????????0?0?0?00?000?0000????00000????????????????????????????????????0100?????????????????????????0000??0??0??????????????00???????0??0???????????1????0????????00??????00?0??0??0\nPostosuchus 000100111101000001100011101?0100001001110101?000010001000??0100?000000001100110011??01001000000100000000000000001001000000101100000??00000?100000000000000?00000000000000000000000000000000000000000000000000000??0000?000000000000000100000000000000?000000100000100010?00000000?00000000000000???0000000?0000010000001000?000000\nPrestosuchus ?1011011?0000000111?01111?0000?0??1010110010?0??????????????0000???????111001?00010001001000000?0000000000000000000000001010100000000000000100000000000000???00000??00000000?????00000??00000000000000?00?00??0???0000?00?0??0?0000000000?0000????0000000000000???1000?0??0000?0??00?00??000000???0??00000??????100?00?000??000000\nRauisuchus ??0????1???000???1??0000???????????0?1?10?00???0??????????????000000000101001?0011?????0100000010?????????????????0?0000101010000???????????????0000?00000??000?????00?000?0??????00?0??0?00000????000?00?00??????00?0000????0?0000??0?00????0?????00000???0?00????000????000??0??00????00????0?0?0?????0?0?????1???0??00?????0?00\nSaurosuchus 010100111101000001110000100010101010001100000000000000000?0000????????010100??00???????010000001000000?0???00?0??0???00?101010000000000000100000000000?0??????0?????000?000??????00000000000000000000000000000000?0000?000000??0000000000000??????000??00000100???1000?0??00000???????0000000000??0??00000??????100000000???000000\nShuvosaurus 00100010001?1100?1011000111000001101000000001110101110111??001111110010???11??1100??10010010111111111010110000101011000000101100000?0001011101010000000000?0000000??00000000?0???000100?10000000000000000000000?1?000?00000000?0000000001?0000????0001000000100???1000?0??00000???11?000?000001??00??00010?0????00??001100??010000\nSillosaurus ?????????????????????????????????????????????????????????????????10111001?11??11???????01?00?1?1001000?0???00?10???????????????????????????????????????0????0?0?????000??????????????????????????????????????????????0000?????????????????????????000??????0?????????????????????????00?????????????????????????????????0???0????0\nStagonosuchus ??????????????????????????????????????00????????????????????????001000010100??00????010010000001000????????????????????????????????????????????????????000??0?0?00??00?????0????????????????????0???0????????????????0?00????0????????????????????000??????0??????????????00??????????????????????0????????0????10???????0???????0\nTeratosaurus ?001001110000000011100101?1101???????1?10101000001??????????00???0??00?????????0???????01000000?????????????????????????????????????????????????000000??????????????????000???????00100000000000?00000?00000??0?0?000?00000??0?000000010??00???????0???????01?0????00000??00???????????00?000?00000?????000?????1???00?1?????0?00?\nTicinosuchus 0??????????????1111?0???????????????????????????????????????0????0000001????11??000000001000000?000000?0?????00??00??00?10?01000?000?00000110?00???0???000?0000000000000?00000000?00?0??0????????0????????????????0?00?00?????0??0??00????000?00000000000?00???0?01????0??0000??0000000????0????00?000000?00000010??????000?0?0?00\nTikisuchus 000????1?1?????0011?0????????0?0???0?0???1???????????10?0???1?000??????????????????????????????10????????????????????????0?0??0??00???????????????000?0?????????????00???00??????000?0??000?????00?0?00??????00????00???0????0???0?00000??0?00??????00??????1?0????????0????0??0???????????0?????????????0??????????????????????0?\nYarasuchus 0????????1?????1?01?0??????????????0?0?????0?1???????????????????1??0000?1000?0?11??0010100000010??000?0????000??001000?????????????????????????0?01?0?000?00?0?00??0000?0?0?0????00?0??000??????0?00??0??00???????0?0000????????0??00?0???????????00?00???01??0?????0?0??00???????0?00????0??0?0????????000????????????000?0?0?00\n;\nend;\n' + if not check_individual_results(cm, t): + res = False + print("interleaved nexus ", end = '') + cm = "./pxs2nex -s TEST/AA_interleave.NEX" + t = '#NEXUS\nBEGIN DATA;\n DIMENSIONS NTAX=5 NCHAR=250;\n FORMAT DATATYPE=PROTEIN GAP=- MISSING=?;\n MATRIX\n\nTaxonE AWWYHNTLNCRGWGEFRYLTHEFCCHWGNAFYHICHNYDNGPTTERFLTIQTWTARDRWCCKHSVHWNFQENFSTYGLKQRFQNQHSCNRHIVRQLWNNLRFFICICQIKRGKGNKCQFCILHYFIHLPSLACRLSYAFGYLRHNWFGTLTPYGFASPPNWYMRSEPSFGNSWNMAIQIANAFRTWKYRECGYSIKQSCDSTLMWPHRYWMIAQYTFQVTDSRTYDFITSSLVVYAFLCDAQARADCIDQ\nTaxonD HWPYHNEWNQRGWGVFRYLTHEFMCHQHRLFYHICHNYDHGPTTERFKAITTWTAQDRWKSGHSVHGDFQENFCTYGMKMRFQNQHSCNRHIGRRLQNNLRFNYCYCQIKRYKGNKCQFVQLKVDIHDKSLAANLIAASMYLRHMWFGPLTPYGFAVPPNWMMVSGPSFGKSWHMQIQIRNAYVTWKYRGKGYSICQSPQNKLMWPNRYWMIEIYTFIVTDIRTALFIQISLSEYAFSCDFIPRQDMNWQ\nTaxonC QVFYATEVNFRDIGSEGFLTCEFLDHFDAHEEKLLHNYVEKPWIEEPLWWRTRKRDDMYFSYHWDFLDFQENFDMHAYSMVMPQQHSYRFGEYRQVVNNLYYFNAGPMGHRQKMNNKQGCRMHYFIAYAQAQFNSGYHAEYLKMLSTGGLDLSGESSDPNWAKMSGESEGWSHWVAMLMRNYYRHGKSHGCKMFKHAYESEKLRCIGISSSGDQYCFTVRDSSGYRFDACVLECKTSLAACGHNANCGWP\nTaxonB QVFYHNEVNCRWINEKGILTHEPLDHFDAHNQHILANNVETPVIYRPLWWRTRKAMDRWFYKTSVHWDFQERFDTHGYSMVAPQQQSCNRAEYRQVVNNLRRFIQPQDGHGRKMNVKQGCRMHYFIARASLEFNSGYHAEYLKQLWLGGLDFSGEKSMLNWAKMSGESEGWSHWVYMLMRNYYRHGKLHGCSHRKEALESEKLRCIGIMRWWKQYAFKVRDISGYRFDRCYLICKTLLYDDGCKANCNWP\nTaxonA QVFTHNEVNCRWHIEKGILTHEPLDHFDAHNHHILANNVETPVIYRPLWWRTRKAMDMWFLKSSMHWDFQENFDTMAYSMHAPQQQSKHSAHYRQQVNNLRRFIQPQMGHGRKMNNKQGCRMHYFIAYASLQFNSLYHAEMLKQLWTGGLDFSGEKSMPNWAKMSGESEGWSHWVLMLMRNYYRHGKLHGCSHRKEILESEKLRRIGIMRWWKQYAFKVRDISGYRFDRGYFGCKTLLNDAGCKVNCNWP\n;\nend;\n' + if not check_individual_results(cm, t): + res = False + print("fastq ", end = '') + cm = "./pxs2nex -s TEST/test.fastq" + t = '#NEXUS\nBEGIN DATA;\n DIMENSIONS NTAX=1000 NCHAR=101;\n FORMAT DATATYPE=DNA GAP=- MISSING=?;\n MATRIX\n\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1426:1976 1:N:0:CGATGT\' NACAACAAAAACTTTATTGAAATAGTTGCATGAAATTTCAGACGTCAAAATAGTCATCTGAAAATTTACTCTTGATCCATTTAAAGCTGTTCCTTATAGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1657:1955 1:N:0:CGATGT\' NGCATTTGTCCTTATACAGACTGAAGAGACCATTGGCATGGATCAAATCATATGTTCTTGGATATGTAGAAAATCCCTCACACCAATCATGATAAATGCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1585:1964 1:N:0:CGATGT\' NTGGAAAAAAATAGTTCTTGGGTTTACTGAAGTTGATCATATAATCTTTAGAGTTCAGCGGCAGGAGGAGCATTTGGTGTACCCTCTGAAGTGCAAGGCGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1539:2000 1:N:0:CGATGT\' NGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATATCGTATGCCGTCTTCTGCTTGAAAAAAACACCCAAGAGCTAGGCGACACGAGGATCTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1881:1990 1:N:0:CGATGT\' NGATATTTCTATTCGACTGGTTAGAGAACTCTTAACTTGATCAATATAGACAAATGGAGGTGCTACAACAACATCGACATCAGCCTCCAAGGTTGCATTGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2177:1964 1:N:0:CGATGT\' NTCCAGTTTTTGATACCTCAACGACATGGCCATCACAATGTTCAACCAAAGAGAATAAGAAGAAAATTACAATCACAAGATGAGCTCCGTTGAGCCCCTTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2295:1951 1:N:0:CGATGT\' NAAAAGTCTGTGCCGCCCTTCAGAGCAAAACCCAATCAACCTAACAAGGTTCAAATGGTGGGTGCTGCTAATGGTTGCTACCTCCATTCTAAACTGTTTCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2642:1999 1:N:0:CGATGT\' NGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2987:1988 1:N:0:CGATGT\' NTTGAGTCCCACATCCCTTCCTTTGCCCACCTGAATGTATTCATGATGGGTAATGTTTCCCTGTCTTAAAGTTGAATTGAAACCTGGATATATATCTTCGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3233:1928 1:N:0:CGATGT\' NATGATTCAAAAATTGGATAGAGTTAAGGGGGAATGCCGCTGCTGATAGATCCCGCCCAGATCAAGAATAGTTGATTATATCCAGGAAAATTAAGAGTTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3186:1968 1:N:0:CGATGT\' NTCCAGCAATACATCTTTTGCAGCAACAAGAGTGAACGTTTTGTTTGCATGAGTGGCAGGCGATAACCCGATTCCAGGTAACACTTTTCCATTTCCCAAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3407:1961 1:N:0:CGATGT\' NTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3354:1981 1:N:0:CGATGT\' NCAGGCCTCTTGCCCCCACACTCGACGTTACCGTTGATGGCGCTGATGGTAGGTCCGAAACCTTGGTTGACCACGCTATGAACGCTGCTCATCCAGTACCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3492:1987 1:N:0:CGATGT\' NTCGACTTTAACATCTGTGGTGATGTTCTTGTTTGTGAACTTAGTGCTCACATCAGCGAGAAAGAACTCTCCCTTCTTTATTCCATTGGAAGTGATGGCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3620:1923 1:N:0:CGATGT\' NAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACATCTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCAGGAATTTTAACCCGAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3698:1949 1:N:0:CGATGT\' NGAAATTTTTGCCAGGACAACTAGCCGGGGCTTGGCCTATAATGCCATCAAAGAACGCCTGACTCACAACATCCCCGACCGAGACACCGCTACTCGGGGTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3907:1950 1:N:0:CGATGT\' NGTGAGACTAAAGCCATAGAGAAATATTCCTAGGCCTTAATTAGAGACCAAATCAAGGAGCTTCCATCATTTGCTTGCCTGGATTTCAGAACTACTATCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3953:1959 1:N:0:CGATGT\' NGCCAAAGCACCTGCATTTGCATTGCTTCCATGAGACTGATCACCCGAGCTTGAAACGAAAATACCCTGCTGGCGGGCTCGTTGGAGCTCCTGCTCAAGTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3806:1965 1:N:0:CGATGT\' NAACATATGATAGAATACATTAGATCACATCATACCACTAAACTTATAACATTAGCATCTTATTGCACAACCAAAAGCAGCACTAATTTAGAGTTGATAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3909:1974 1:N:0:CGATGT\' NTCCACTGGCCGACGCCTGGAGCGCGCAGGTGCCGAGGCACGCTGTGACAGCGCGCGCTGACTACCACAATCGCGAGGACAGCACTCCCGGAGACTGGGTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3887:1986 1:N:0:CGATGT\' NTCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGCTTGGGGCTGCATTCCCAAACAACCCGACTCGGCGACAGCGCCTCGTGGTGCGAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3753:1998 1:N:0:CGATGT\' NCGCTGACTACCACAATCGCGAGGACAGCACTCCCGGAGACTGGGTTTCCGCTGCCCTCACAATCCACGTCAGTCCGCACCCCGAGCCGATCGGCGGACCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4218:1933 1:N:0:CGATGT\' NCATGAATTAAGTGATGTAATTAAGAAATGAATGGCACAACCACAATCGACACCCAACAACATTATCACTATATGATTAATAAAGCTATTTTCCATTCAAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4054:1941 1:N:0:CGATGT\' NTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGCTTGGGGCTGCATTCCCAAACAACCCGACTCGGCGACAGCGCCTCATG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4066:1956 1:N:0:CGATGT\' NCTAGGGCGACGCTAGGGCGACGCGTGAAGACCCGGGGTAGTAAACTACCCGGACGGGACTTCCCCCTTCAAAAATTAATTTAATATCATTGTGGGCCAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4441:1928 1:N:0:CGATGT\' NGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4424:1942 1:N:0:CGATGT\' NCGAGATTCTTTCCATCTTTTTCGATGGCATGTTTGAAAGCAGCTCCAAATCCAAGCCACACTGGAAGATGAAACCTTGTCTGAGTCCAAGCGAAAATCCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4623:1935 1:N:0:CGATGT\' NTCATAAGGTGCCGGCGGCGTCCTAAAAGTAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4603:1977 1:N:0:CGATGT\' NTCAAACTCTCACCATAGCCAAAAAACTAAACAATACCAATTATACAATAAGGTCTAGATTGATGATTCTGGCCCTAAAAGGGAGGAGGTGTCTTAAGTAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4758:1929 1:N:0:CGATGT\' NATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGCAAAAAATTTCATCACTGAAAATTGACTCGCCGTCTTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4771:1943 1:N:0:CGATGT\' NTGTAGAAGGGGAGATATTGACACCTAAGTTGACACCGCACTTCCCAGGGAGGGGACCCGCGTAGCCATAGTTGACCCCATAAGATGGGATAGTCTGTTTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4948:1974 1:N:0:CGATGT\' NGGATCTGTCGTGCTATCGCATTTATATACATGGTGTCCCGACAATGAGGTTGCAAGAGTTTATAGATTGGATGAAGCACACTTAGTTGTCTGTTTGTTGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5023:1970 1:N:0:CGATGT\' NATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGTCACACCTTCGCAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5376:1952 1:N:0:CGATGT\' NAGCTCTTTCTGCTCTTTCAAAAAGATAGTCAAAACCCTTACTACTCAGCGGCTTCTTTATTACTCTTCTATCTTTCTGAACTTTACTGAAATTCGCTTTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5460:1978 1:N:0:CGATGT\' NAGATTTTCCACAGCTTCACCTAGCCATGCAACTATGCTTCAAAAGGCTTATGACATGGCTGCAAAGCACCAATTAATGGTTTTGATACACTGCTGCCAAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5685:1934 1:N:0:CGATGT\' NCCAATCAGCATAGAAATTAGGAGTGGGTGGAATTCCCCAACCATCCACTCCACCCACAACATGAATCAAAGCTGATCCATATTGCACTAATCCGCACATT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5761:1985 1:N:0:CGATGT\' NTCGCCGAGGGCACTGCTAGCAATAGAGTATAGTCTCAACTTATGGGGCTTTCCATTTTTGTCAATACCTTCAGGAATCACACCAACTGACTGCCCTTCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6067:1929 1:N:0:CGATGT\' NGGGATTCCATCATTAGTGAGGTAAATAACAACCCTGGAGCTGGATGGAAGGCTGGCATGAACCATCAGTTCTCCAATTATACAATTGGCCAATTCAAGCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6174:1980 1:N:0:CGATGT\' NTATAGCAAAGCATTAATCCTTTTTGTTGTGGCATCAATAGTTTCTTTGTCTCGTTTGGTACCAGTCTCAGTTACAAGTAGGCATTGGATAAGATCGCTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6066:1994 1:N:0:CGATGT\' NGGGAATTCGCTGATGATAGATCTCGCCCAGTGTCCCCCTCCTTCCCCCGCCGCCTTCCGACCCGCGGAAGAATCCAATTTCAACTACCGGAGACTCATGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6454:1931 1:N:0:CGATGT\' NCCTTTTTGTATCCATCAACCATCAACGGCATGGCCAGGGCACCTCTTATCGTTTTCCATCCAGTTCGTAACAAGGAAAGGAAGCCTTTCCATGTCAAAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6486:1941 1:N:0:CGATGT\' NGGGAAAAGGATTCGTTCGTCTAGCTATTGAGAAAGGCTGTCCTTTGGTTCCAGTTTTCTGCTTTGGCCAGTCGAGAGTCTACAACTGGTGGAAGCCTAGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6286:1969 1:N:0:CGATGT\' NGAGAAGATCGCCAAAGAATCTGCAGCTTAAACAAAAAAACTGAGCTTGGGATGGCAATGTTGGGATGAAAATAAGGATTTCACTGAAATCGTCAGGAAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6457:1990 1:N:0:CGATGT\' NCACAACCTTTAACGTCAGGTTTATGAAGCGATATGAATGATGAGAGTAGAGTTGATTTTGGTGGTGGAAGCGCCTCTGGAATCGTTCCAACAGTTTGCTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6510:1923 1:N:0:CGATGT\' NCATCATCACTTCCACCAGAAATATAATCACCATTTTGGCCCAAGAAAGTAGCCTGCTTTATGTCAGTTCCCACATTACAGTGTCCAACATATCTCTGTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6738:1950 1:N:0:CGATGT\' NGACGATAGCAATATTTGTAGGGACTGACCTCCATCCAATCACCTCTAGACCCTCTTGTGAAAATATACTTGCAACAACTTTTCTCGCTTCCTCTGCAAGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6546:1958 1:N:0:CGATGT\' NTGACACTGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6727:1973 1:N:0:CGATGT\' NAAAAAAATTGGATTTCGTGTAATAAGTTTGATATTCATCAATCCCTGTTAAAAAATAATCACAAAAATCTAAACATTTATCTATCCATCCATAAGGTAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6717:1990 1:N:0:CGATGT\' NCCAAGGATCCAGCACACGCGTCATTAGCATCACCGACCGTGAAACTTAAGACGTATGTCTTCTTAGGGATGGTTCGGACCACTTGAGCGATCGCGCTCTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6984:1979 1:N:0:CGATGT\' NGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTTCGGGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCCGCTCAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6784:1985 1:N:0:CGATGT\' NTTTTTCCTTGGTGTAAAACTTCCGGTAGATTTGCTCACCTTCTTCAATAGTCAGCACACCTGGAAGGACTTTCTGCAAACCTTCTGTTTCCAGCATCTCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6839:1992 1:N:0:CGATGT\' NACAATTTTGCCAAAAAAATGAAAAAAACCCAAAGGATAATCGAAACGAACAAAAACCGAAACAAGAACTTCGCCGGAGAAGCCTCCATTGACGGAACAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7208:1925 1:N:0:CGATGT\' NACAGGTAATCGCTTGTGTAGGTGGTGCAACCATCACCATGGTGAGGAATAGGAGGCATGTTGCCTTTGTTAGCATTGTTGCGGTGGCCATTGTACTCTCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7218:1939 1:N:0:CGATGT\' NTCCAGTTCTGTACTTTTTGCTGGCGAGTAGTCCATGGGTATAAATTGGCCACGTGGTATCAACTCAGGGTCCCAACAGACAAAGTATATATCACCGTCCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7051:1973 1:N:0:CGATGT\' NCCACGTCGGTGAGCTCAATCTTCTCACATGGTGCTCCGCTGCTACAAGACAAGGCAACTGCTTCTGTCCTCGTGGTTGTTCCCTTGACGTTCCTGATTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7128:1990 1:N:0:CGATGT\' NCCGATTTTTTCCAGCCCAAGCCCAGCTGTGAACGGCATTCGCCCAGCAGAAACAAGAACAACATCAGCTTCAAGCATGGTTTGCTCTCCACCATCTGCTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7438:1941 1:N:0:CGATGT\' NATCGGAAGAGCACACGTCTGAACTCCAGTAACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGCAACAAACAAGAATGCTCTCCCCGCAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7281:1952 1:N:0:CGATGT\' NTCTTCTGATTCGATTACATTGGGGCCTGCAAACAGAAAGAATGGTTCTGCTGCTTTCAGGTGGTTGTAGAGCGCCGTTGAAGAATCCATGTTTCAGCTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7388:1963 1:N:0:CGATGT\' NCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATCCCATGTCAGGATTGGGTAATTTGCGCGCCTGCTGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7352:1966 1:N:0:CGATGT\' NCCACACTTACCCGGAATGCCTATTGTTTATGCAAGTGATGCGTTCTTGAAACTGACTGGCTATGCCAGGCATGAGGTTCTAGGCAACAGACATAGATTTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7463:1968 1:N:0:CGATGT\' NTGATTATTTGCAGAGATACTTTCAGGTGTAGACTTCAACAATGAACTGTGTGATTCCACAGCTCCATCATTCACCATGGAACCACTCCTACCACTTGCCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7496:1993 1:N:0:CGATGT\' NGCACATGAAAGCATCTTGTTGATACGAAGGACATGGAATGGATGCACCCTAACACGTAGATGGAAAGCATCCTTTCCAGCAAATTTAGCCATGTACTTGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7671:1925 1:N:0:CGATGT\' NATTAATCCTTTTGTGTCCCAAATTGTCCAATTACTTTGAGGTCCCAATATGTAACACATTGTGGCACCAATGAATGCTTGTAGTATTAGAAAATTGTCCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7633:1929 1:N:0:CGATGT\' NGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAACAAGGGAGCGCGACCCTTCGTCCCGGCCATTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7621:1970 1:N:0:CGATGT\' NTCCACATTCTCTCCGGCATGGCTGATTGGTTGGGCCATCTAATGGAATGTTCTTGCCACTTTTTCAACACTGAGAAGAAGCAGCAAGTGGTTAGAAGAAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7644:1970 1:N:0:CGATGT\' NCTTCCCGGACTCGGGGGTACTGGTGTCCTTCGTCAAGAAGTTTCTTGATCTGGCCGGAGAGGTGCCCGATCACTGCCATTGGCGGTGAGATCGGAAGAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7801:1926 1:N:0:CGATGT\' NTTCTATATCATGAGGTTGATCTCCAACGGGAACCTTAGTAATCCCAGGCAGATCAATGAGTGTTATGTTCACAACATTTGGCGAATAGATCTTCAATCGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7782:1934 1:N:0:CGATGT\' NTGAAATTAACCCATTTGAATGTTGGGTCCATGTAATTTTTGTACATTTCAAGGATTTCATTGTGGCTCACCACACCCGGGTTAGTGAAGTTCCATATGCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7759:1956 1:N:0:CGATGT\' NAGCCGAGTTTGAAAGTGTGAAAGTTATTTCACCACAAGGTGAAGTTGTAAAGCAACCCATGGTTAAGTTAAAGTCGCAATTTCCAACCTCTCCACTTAGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7902:1979 1:N:0:CGATGT\' NAAGATTTTAATTACTTTGACCATTATTTTAAGTTTAATTGAGTTTTAATTATCTTTATTATTGTTATATACTCTATCTATCTCACAAAAAATTTCTCATT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8152:1930 1:N:0:CGATGT\' NGAAGCGAATGGGGGCCGGCGATGTGCCTCGGTCGGATGCGGAACGGCCTAAATCCGGTCCGCCGATCGGCTCGGGGGGCGGACTGACGTGGATTGTGAGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8046:1944 1:N:0:CGATGT\' NCGCTTTCACCGGGGAACAAAGGCTGTCCAAGTAGAAGCTCCGCCAAGACACAACCTACAGACCACATATCTATTGCATTTGTATACTCACTAGCACCGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8344:1941 1:N:0:CGATGT\' NATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGAATAGCCAACGACACGTGCACTTGGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8408:1968 1:N:0:CGATGT\' NGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTTAAGCGCGTGACCTATACCCGGAGAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8298:1975 1:N:0:CGATGT\' NGAAAAATTGAGACCAATAAATGATGATAATGCGATTAGTACTCCATTTAATGAACTGGGTTATCATGATGTTGTGTTAAATGTTGAAAAAATGAAAGAAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8512:1959 1:N:0:CGATGT\' NGGGCTTTCTTTTCTTTCTGAATATCGTTACATCAAACCCTAACCCTATACCACCACCAACCATGTCTTCTAAAGCTGGTGGAAAGGCAAAGCCTTTGAAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8618:1971 1:N:0:CGATGT\' NAGCGATTATTATTACATCCAGACAAAGAACCTGAAGATCCAAAATAACAGCAACAATAGCAATAATAATATGCCTCTGATACAGAAATGCCAATATTGCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8628:1991 1:N:0:CGATGT\' NGCCGACCGGTCCGCCTTTCGGTGTGCACCGGTCGTCTTGCTCCTTCTGCCGGCGATACGCTCCTGGCCTTAGTTTGCCGGGTCGTGCTACCGGCGCTGTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8902:1941 1:N:0:CGATGT\' NCCTTCTTCTCGTACTTGCCTGATGCCTTCTCTTTCCACAACTCGAGCTGAGCAATGACTTGGTTGGTGAATGAGCAAGACATGACAAAGCTGGGGTGACC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8800:1943 1:N:0:CGATGT\' NTTGAATGCTCTACATACCACCCATCCTTCTTCCTGAGGGGGTCCATTCTCATCAGATTCAAGACGATATTCATGCATAATCCAATCAGATTTTTGACCGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8804:1994 1:N:0:CGATGT\' NGCCAAAAAAAATGCAGAATGATACAGACAAGTAGACAAGTAGTTAGTCCAACAAAATGTTCAACAAATTATACTTGATGCTGATTATACAACCAGAAAAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9333:1929 1:N:0:CGATGT\' NTAGCCCCCACATCATATGGCAGTGATAAAGAATCTTCCATCCCTTTTCATCTTAGAATGTAGAGAAAGTACATGTAGATGAGCATAAGAACGACAGATGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9513:1930 1:N:0:CGATGT\' NTTCTATGCAGATGTGACATGCCGTATCATGAAGAAAAGCAGATGATCTTACATCATTTGTAGAACTAGTGATCCTTGGTTTACTTGGTGTTTTATGTTTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9612:1972 1:N:0:CGATGT\' NTCTAACTTACTAGCCATAGACATAACAAGACTAAATTTCTCGTCCATAACAAGATCATCAATGGACTTACCATCACCCATGCACCAATCAAAACAGTGCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9547:1985 1:N:0:CGATGT\' NGAGACTTGGGTATCAACAACTAATGACAGAGGGAGCATTTGAGTTCTATCCCATGGAGAGGGAGTTGATTCTCCACGCACTGTCCTCCATGTACCTTACT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9674:1993 1:N:0:CGATGT\' NGGCCATGGAGGCTGCGCTTGAGAGGGGATTGCCAGTAGCTCGTGCTTTCTGGTACGCGCGCAGGCCTGGGTCGATCTTTTTGACTGCTCCCCACATCCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9828:1968 1:N:0:CGATGT\' NTTGGACCGAAGTAATGGAACCCTTCTTGGTGGTTGTGATACGCTCCTGAAGACCTCCAAGATCAGTTGCCAAGGTTGGTTGATACCCGACGGCAGAGGGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9856:1989 1:N:0:CGATGT\' NGTCCTCCATGTCCTCCATGTCCATATCCACCGTGTCCATATCCACCGTGTCCATAGCCACCATGTCCATAGCCACCACTGCCTCCATAGCCACCATGTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10195:1926 1:N:0:CGATGT\' NCACAGCATACATACACTAGAATATTCATGATTCAGCTAAGATGGTGATGAGGGACGCCAGTTGACGTTAATGATAAAAGAACACTCAACCATCTTTCTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10231:1927 1:N:0:CGATGT\' NACACGGGCAACCACCCTCACCGCTCATTCCCATCTCTCCATCCACATACGAGATCTTGGGGGCAACACCGATGACAAGTGCGACGTTGGTGCTAGTTGAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10231:1955 1:N:0:CGATGT\' NCAAAGTTTAAGGCCGCGTGTTGGGCTGAGGCTAGCCAAATGAGTATGGTTAGGATCTTGACTAGGTCTTGTGGGTTGTTGAGTTTGGGCCACCAGCTAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10191:1990 1:N:0:CGATGT\' NTTTGGGGAAGCAAGGTGTAGCGAAACCTAAAGGACCACTCGAGGCACTCCGGCCTAAGTTACAGCCGACTCAGCAGCAAACACGATACAGGAAATCGCCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10145:1992 1:N:0:CGATGT\' NCACAGGTAAGTGAAAAGCATATAAGACCGGTACAAGTGAGAACTTGATCATCTTTGTGGATAGGGTGCCACGCGGCAGCTTGCTTCTCTGCATAATAGTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10464:1991 1:N:0:CGATGT\' NCTCGGTGATCATTGGAAATCCTTGGGCATATTTAATGTGACGAACAGACCCAACCTGTTTACCATCACCTTCAATGATCTCAATGCTCTTAAATCTGTTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10689:1925 1:N:0:CGATGT\' NTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10534:1952 1:N:0:CGATGT\' NCTCTGGTCAGTTTCAGTCAGAGCCAGATCCTGAGTGAGCTTCATATTTGCCTCAGCTAAGGCCTCATTACGCATCTCAATCTGACCCAATTCCATCTGCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10744:1959 1:N:0:CGATGT\' NTCCAGCAGTTGCCGAATCTGCTCTTCTGCTAATATTTGTTCCCAGCAAAAATCTTTCACGTAGATTAGCAGCTTCATTCAGTCCTTCCTTAGCCCACTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10668:1961 1:N:0:CGATGT\' NGATTGCTAAAGCAGATCTTGGTATAAGAATTCCCAGGTTTTACAAGAGGCTTTAAGAGATCCTCAGCCTCTTCAGCCTCAATGAAAGCACGTTTACCTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10522:1978 1:N:0:CGATGT\' NGGAGGGAAGCGAATGGGGGCCGGCGATGTGCCTCGGTCGGATGCGGAACGGCCTAAATCCGGTCCGCCGATCGGCTCGGGGTGCGGACTGACGTGGATTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10555:1981 1:N:0:CGATGT\' NGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGGTAAAATTCTGGATTTATAATTTATAATGAAGAGAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10697:1991 1:N:0:CGATGT\' NGGCAGTCTGCTGAGTTGGATCCTTGCCAACCAAAGCAGGGGCAATAATCTCATTAACATTCTTAACAGCCTTAAAAACACCTTTTCCCATGTAATCCGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10885:1950 1:N:0:CGATGT\' NCGATTGTTTAGCCATCACCAATTCAGCACTTGAAACCAAATCTTGATCTTAATCAAATGACCAAATGAACAAACACACCGATTGTTTAGCCATCACCAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10954:1994 1:N:0:CGATGT\' NGCTCACATAACTGCTGAACCCATTCCTTGCTGCAGTGCCTCACAAATGCTTCATCACTGGTGATTGGTTCCTGACGATACTCCATTTTTTTGGTATTTAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11132:1937 1:N:0:CGATGT\' NGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATCGGCCCGCAGAGGAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11180:1951 1:N:0:CGATGT\' NGGCTCTTGAAACCACCAAATGCAGTACCCTTCCAAACACGGCCAGTTACCAATTGGAAAGGACGAGTAGATATCTCCTGACCAGAAGCAGCAACACCTAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11174:1979 1:N:0:CGATGT\' NTTCATATTTCTTCTCAAATTCACCAGAAAGATGCCTCTTGACAAAAGTGGTTTTACCTGTACCGCCGTCACCGACAAGAACAAGCTTGAAACTAGGATAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11399:1971 1:N:0:CGATGT\' NGCGCCATCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCATTGCACCCCCGATGCCTCTAATCATTGGCTTTACCTGATAGAACTCGTTTAGAGCTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11506:1954 1:N:0:CGATGT\' NGCATGAGCATTTTGCACACCCTCGTCCCATGTATTAGACACCACCGAGGGAGTTTCAAGAGCTTGGAAGTTTGCCCATTCCGTTTCAACTTGCGACGTTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11818:1923 1:N:0:CGATGT\' NCCCCCTCCTTGCGGTTAAGGTAACGACTTCGGGCATGGCCAGCTCCCATAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGAATTCACCGCCGTATG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11986:1927 1:N:0:CGATGT\' NCCCCGTCCTCTGCCACTAACAATAAAAACAGTGTTCTTCGGATCATTGCAGAGGGTGTTCAAGAGCGATATGAGATCACCGCTTGGTGATTTTACAATGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11889:1929 1:N:0:CGATGT\' NCGCGCCATCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCATTGCACCCCCGATGCCTCTAATCATTGGCTTTACCTGATAGAACTCGTTTAGAGCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11908:1946 1:N:0:CGATGT\' NTAGAATTGAATATGAGAGTCCGATATTGTCGGCGATATCCAAGAGTCTGCATAAATGTGAACAGAAGCAAAATCGATGCCGAGGATTTGATGGTTTCTAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11932:1983 1:N:0:CGATGT\' NCCGATGTTTTTTTACATCTCACAGCTTCGGCAGATCGCTTAGCCCCGTTCATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11900:2000 1:N:0:CGATGT\' NGATCGGAAGAGCACACGTCTGAACTTCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAGGACCTAAAAGGGACTGGACGACGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12165:1969 1:N:0:CGATGT\' NCTCAGGTCCAATACGTCTAAAATTGTATAAATTCAGTAACTCATCAACTGTAGGCTCCCAAGGAGCAATTTTACTTTTCTCAATTGCCCCATAAGTAAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12387:1928 1:N:0:CGATGT\' NCCAGTCCTGTATCTCTAGACTCCGCTCAACAAGTTATTGCTAACATTGTTATACGAACAGGCACATGTTGCGCAAAGGGCCCGTTTAAAGTCCCAATGAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12407:1934 1:N:0:CGATGT\' NGGGGGCTCGAAGACGATCAGATACCGTCCTAGGCTCAACCATAAACGATGCCGACCAGGGATCGGCGGAGGGTACTTTTAGGACGCCGCCGGCACCTGAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12364:1941 1:N:0:CGATGT\' NAAAATCCGGAGGACCGAGTGCTGATCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGCCAATGGAACAATGTAGGCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12324:1944 1:N:0:CGATGT\' NCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12432:1955 1:N:0:CGATGT\' NAGGTATTGGTTTATCATGGTGAAAAAAGACCGGTATTTTTTTTTGAACCGGGTTCGATTTCAACAAAAGATCACACTTGGGTCGCATAGTTGCAGCAATG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12300:1960 1:N:0:CGATGT\' NGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12409:1966 1:N:0:CGATGT\' NTGCAGCTAGCATTGGAGATAACAGTGAGGTCTGATGTGTACTCGTGCTCGTTAACACCAACAACGAACATAGGAGCATCCTTGCTGGGAGCAGAGATGAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12986:1925 1:N:0:CGATGT\' NGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAATTTTAAAAGCCAAGTCCTCCATCTGCATCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12797:1952 1:N:0:CGATGT\' NAGATGATGTGTTGATTATGCTACTTCCTTCTTTCATGTGTGGCAGTGAGTACCTTGCCATGAAGAAGTAAGCGAAGATATTAGTTTCAAAAGTCTCTCGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12954:1969 1:N:0:CGATGT\' NTACGGGTACCACCAGTAACATGTCGCCTTGTTTATGGCCCGATTTGATGTACTCGACTAGGCCCCTTAACTCCCAGTTGGGTATTGCTCGCTTGTTCATT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13082:1923 1:N:0:CGATGT\' NTCAAATCTACCTTATACTTCGCAACTTCACACTATAAAAAAAAAATAATAATAATTTAAAATAAAAAAAATTAAAACTTAAAAAATAAACCTCAACTTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13153:1957 1:N:0:CGATGT\' NTTCTGTTCTACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13035:1969 1:N:0:CGATGT\' NGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAATATAACAGACGTGGTGAGAAAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13125:1977 1:N:0:CGATGT\' NCCAACTACTACGTAGACAAAGTTACATTGAATCCATAATACCTACTAAAGTAAGATCATCAGTCGGACACTTAGCGTGCAGTACATGTAGAAGAAGAAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13364:1928 1:N:0:CGATGT\' NAGAGAGATTCCAGCCTTGGCATCAAAGATGCTTGACCTGTTGTCACCAATGAAGTCGGTGGACACAACATCATCCTCAGTGTAGCCCAAGATACCCTTCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13315:1990 1:N:0:CGATGT\' NCCCTGCTCTCTTTTCTAGCCTCAGCAGAGTGCATGGTAATGCATGCATTGATCAACAGATTTTCCAACTCCAGGGTTTCTATTAGGTCAGAATTCCATAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13724:1970 1:N:0:CGATGT\' NGGTGCAAACAATCATGGAAGTCATGACCTATCTCTTAAGCGAATAACACTAGATGATACATGTGACCGAAATGAGGCCACATCCACCTACCAATTTCTTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13917:1935 1:N:0:CGATGT\' NTCCAAACCACCAGCATTGCCAAAACAGTAGCTACAACTACGACCCCAGCTCGCCTCGTTAACCTCAGTATCGACAACTGAGTTGCCGATACTGCTAACTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13878:1958 1:N:0:CGATGT\' NAACCATTCATCCATATCATCCACACTATTTAAGGCAGTATCAATCCCTTTCAGCACCTCTTCAACTAAAGGTTCTGTTTCCAACATAGCATGCACATTTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13779:1965 1:N:0:CGATGT\' NTTCAGACAACTTTCCATTCCCACCATCATATGGCGATGCTTGTCTTCCAACCCATCTCTTCTCTTCGTACTTTGCACGAATGAAGTTTTCAATTCCAACT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13965:1981 1:N:0:CGATGT\' NCGGCGGAGAGAGGTGTTCGCGCGTCGCAGAGTGGATCAGTCGGCATGTCGCAGGGTGGATCGGTTGGCGCGTCGCAGAGTTGAGCAGTCGGCGCGTCGTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13776:1993 1:N:0:CGATGT\' NGAACGGAATAACCAAGCAGTAAACTATACAAAATGCCTACCAAAACCAATGAATCAGGAGCTTTCTTGCATCACCGCTTCACTTGGATTCATAGCAACAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13800:1997 1:N:0:CGATGT\' NCGGGTCACTTGAGAGACACCTCAAGGCGAGATTAGCTACCCTCATAGCATGTTCTAGAGAGTATTGTCCTTCGATACGAGGATCAAGTACCCTAAAGATT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14047:1993 1:N:0:CGATGT\' NCCGCCGACATCTCCGGACTCCCTAACGTTGCCGTCAACAGCCACGTCCCGGTTCAGGAATCTTAACCCGATTCCCTTTCGATGCTCGCGCAGTCGCGCTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14410:1939 1:N:0:CGATGT\' NCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTATCGGCCAAGGCTATAGACTCGTTGAATACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14342:1950 1:N:0:CGATGT\' NGCAAACATTCTTTGCCCAATCTACAGGTCCTTGACCGTCAAATACGCCGGCTCCTTTGCCGCCTTGAAATGTCAACCCACTGAGTTGGTAAATCTTGATC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14443:1960 1:N:0:CGATGT\' NCACAACTTCCCTTTTCCCAATGGCAACCACATTCTCTCTCCTCCCATCAACCACCTACATCCGCCACACGCGCCACCGTCTCAGCCACCGTACCAAACCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14411:1982 1:N:0:CGATGT\' NCTTTCATGAAAAAAGGCTGAGAAGTGCAAAGTCCAGTTTTTTGAAATTCATCAAGAAGTTCTTCAGAAACCCTTGTTAATGTCAATGCAGAAGGCTTTTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14373:1987 1:N:0:CGATGT\' NCCAACCCCAAATTAAAAAAAAAAAAAGAAAAAAAAGGTGAAATTACAAATTTGTCCATCCAATTCATTTTTTTTTTCATAAGAGATATAGATAGAAAAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14689:1957 1:N:0:CGATGT\' NTAGAGGAGAGAAACCTGGGTGTTATCATCTGGATTCTTCAATATAGCTTCTACTACCTGAAGCATTGGAGTAATGCCAGTTCCACCAGCAACCATGCCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14788:1930 1:N:0:CGATGT\' NGGCCCGCCCAGACTTTCAACTTCCTTATGAACAGAGCTGGGCATCGACGGGCCCACCTGGGACCGTTGTGTCAATACCATCTTTCCAAGAGGGGCCCCCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14875:1960 1:N:0:CGATGT\' NACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14941:1978 1:N:0:CGATGT\' NCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGATCTAAAGGATCGTTAGGCCACGCTTTCACGGTTCGTATTCGTACTGAAAATCAGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15221:1937 1:N:0:CGATGT\' NACATTTTTAATGTCGAGGCACTTCCTTGTTGACATTTTCCCACGCAATAGATGTTGCAGGCAACATTGCATAACATAAACTGAGATCTTGGAATAACAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15119:1960 1:N:0:CGATGT\' NGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAGAAGAAAATAAGCGACACAGCCTCATGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15092:1970 1:N:0:CGATGT\' NCAAAGCCTTGTTATGCTCGGCCCATTTTCTGTTGAGCTCTTCAAGAAACAAAGCTCCTTGAGCAGCCTCTATGGACTTGGATATTTCCTTCAAATGAGCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15224:1976 1:N:0:CGATGT\' NTGGGGTTTCATATTGAAATAATCCAAATAGTAAAAAAAAGATAAAAATGAGATAGATGGAGTAAAATTTTAAACAAAACACAGTATAAACATTAATCATT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15243:1990 1:N:0:CGATGT\' NGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGGGAGGCGGAGTGAGCAGGCCTTCCGACCCAACAAAGTATCAAGCTTGCGCATC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15082:1998 1:N:0:CGATGT\' NATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAGTAAACTTCACTGGGTATGCTCCCTTCGATAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15381:1935 1:N:0:CGATGT\' NCCTACCTCCGGCTGACCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCTCCCGCCGACATCTCCGGACTCCCTAACGTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15393:1966 1:N:0:CGATGT\' NAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGTCGGAAGGAAAAGTGTTATAAGCTTTGAATGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15619:1933 1:N:0:CGATGT\' NGGCTAGTTAAACAAGTATATACACGGCAGATGGAACATGACCTTTCAATAGTAGGACAACATACTAGATTTCCCTCTCTCTTCTTTAATCTATGTAGTAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15746:1943 1:N:0:CGATGT\' NTCGAAATCAAACTCCACTTAATCAAATTGAATAAAAACTGGTCTGAATTTCCAGCCCAAAAATTATCGTACCTGAAATATCCTAGACCCAACGTTGGGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15709:1964 1:N:0:CGATGT\' NTGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCCAACTGCGCGCTAACCTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15574:1977 1:N:0:CGATGT\' NTGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15917:1981 1:N:0:CGATGT\' NACGCTTGAACCTTGCAATACCACGCTGCTCCAATCAATTTATGCATCATCAAATCATATAACCTTCTCCACGATGAACACCACTGACCATACTGTCACAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15836:1987 1:N:0:CGATGT\' NCTTGCGACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGCGTCCTAAAAGTAACATCCGCCGATCCCTGGTCGGCATCGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16205:1941 1:N:0:CGATGT\' NTGGAATTTGGTGCAATAAGGTTTAAGTTAAGCTAGGACAGGGCCTGCTGCAATAGCATCTCCTGGCAGCACCTCCACAAGCTCCTTCGGGAAAACCCTCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16409:1934 1:N:0:CGATGT\' NGGACAATTTGGATTGGCTGAGCAGGGCCACCAACTGGGCCAAGTTTAGCGCAACTGCTGGATTGGGTGTCATCCATAGAGGTCATCTGCAGCAGGGTCGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16670:1940 1:N:0:CGATGT\' NCTCAAGGTTTCCACGATGTAGTTAGCATAAAGATCCATGGAATGCTGTATTGCATTATAAGCGGTAGTTGCTGGGAGAAATTCATCAACTGCAACATCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16932:1937 1:N:0:CGATGT\' NAGGCATTCAGCAACACATGGTACCCCTTCTCCAACATCCTTAAACATGCTGAGATCAAATCTTCATAAATTACCCATGTACTTTGTCAACCATAGATTCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16753:1989 1:N:0:CGATGT\' NGGAAAATTTCCAACCGGCAACAAAATATCAATAATGTACACAAAGATGCCTTCTTCTCTTCCGAAACAGAGGGCTAGTAACTTAATCTAACACCAGTTTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17022:1938 1:N:0:CGATGT\' NTTTGAATTCACATATTGCTTTGAAGGAAGTGATCCAAATCATCAATAATGGTCCCAAATTCAAGGATGCCTCTTTAATAACAGTGCACAGATAATAAATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17015:1979 1:N:0:CGATGT\' NCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17401:1957 1:N:0:CGATGT\' NAGAATATTGCTCAAGAAGAACGATTGCGTGGTGGCCAGAAGGACGACCGAGAGATGATGATGGCATTTAAGGTTCAATCAGACACACGGGGAAAATTAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17375:1968 1:N:0:CGATGT\' NGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGCATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAGTTAAATAGGGCGTCGGCGGACAGTCAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17446:1974 1:N:0:CGATGT\' NTTGACCTCCCACTGCGAGGTCGAAGAATACCTTGGGGTTCGACATTTGTACTTTTGATTTAGGAAATTAGGGTTTTGAATTTGGGATTTTGTATTTGAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17277:1978 1:N:0:CGATGT\' NTTGGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCGTGGCACGGCTCAACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17493:1991 1:N:0:CGATGT\' NTCCTTTAGCTTTAACTAGTTTATCACAGTGACTCCACTCTCCATGAATGGTTCCTTCCTACACAACTCAAACCCTACTCTTCTTGGTGATCAAAGAAACC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17548:1932 1:N:0:CGATGT\' NTAAGGAACCACGAGGGGGACATAATCACTTGGTTCGCTAGACCAAGTGGGGAAAAGGAGATAAACAAGGCAGAGCTCGAGGCGATCTGTATAACCATCGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17834:1938 1:N:0:CGATGT\' NTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17812:1949 1:N:0:CGATGT\' NCATCATTATCGGTGTCTACTTCCATTAATATCTCCTTAATGCTGTCCTCGTCAGCTATGCCGTACTCCATCATCGCTGTTTCTAGTTCATCTGTTGTATT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17854:1960 1:N:0:CGATGT\' NTGAAGTTTAACAACATCTTCTCATGAGCATAGCTACTGTTTGCATTTTAATGATAAGACTACTTGATTCCAAACTAAAACAGAGAAGCATTTAATCAAAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18152:1936 1:N:0:CGATGT\' NGCCAGCGCAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACAGGCAAAGCCCGCATCGACCTTTTATCTAATAAATGCATCCCTTCCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18117:1975 1:N:0:CGATGT\' NGGCAACTCTGTGTGCTGCAAGACGTAAGTAGGATGTAGGAAAGTGTTGGAACTCAAACTGAAGTTGTTCTGGACTCTGCAAGAACTGCTGAATATCGAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18281:1959 1:N:0:CGATGT\' NCTCGGTCCATCTTTTCAATCTGGACTTCTTTTTCTTTCAGAGTAACAGTGACATCGCCCTTGGTTGAAACCAAGCTCATAGTCTTTAACTCTCGCTCTAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18421:1961 1:N:0:CGATGT\' NTTTAACAATTTTGTAATTTTTTTGCATATCTAGATGTGCAAAAAATTATGAACATAACATTATTCTGATTTAGGTTTGGTATTGGTGTTTTCTTTACGCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18617:1931 1:N:0:CGATGT\' NGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18982:1983 1:N:0:CGATGT\' NCAGAAATTTGAATGATGCGTCGCCAGCGCAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACAGACAAAGCCCGCATCGACCTTTTAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19076:1949 1:N:0:CGATGT\' NACTGCAACTCTGGTGGCCAAATTCAACCATGACCTCACACCTCCACAAGCAAACCAGCAACAACCTAAACTAGTAAGCGTGTTAAAAATACAACCAGAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19033:1953 1:N:0:CGATGT\' NGTGACATCAACTTTTTATTAAATGCTCCTATTCATTATAAGGCGGGTTACAAGTCTCTTGTTTCCGTCTTCCATCTGTTGCTTCGCTAGTGCACCTTAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19145:1971 1:N:0:CGATGT\' NGGACGGACTGGGAACGGCTCCTTTTGGGGCCTTCCCCGGGCGTCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19003:1988 1:N:0:CGATGT\' NAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19450:1968 1:N:0:CGATGT\' NTCAGTTCGCCAGGTTGTCTCTTGTCTGCCCATGGATTCAGCAGCAGTTCGAAAGGTTGACCTATTCGGGAATCTCCGGGTCTATGCTTTTTTTCAACTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19743:1963 1:N:0:CGATGT\' NTATATTCTTATTTGTGGTATTGACTTTCAACACTCACAATGGGCAGAAATATTATAACATGCCCCTCATACGAAGGCCCGATGTGAGCTGAAGATGTGTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19669:1995 1:N:0:CGATGT\' NAACTTGGCACTTGGCCCTTTTTTCCACTACCATAATACACCTTGTGTTGGTCAGGAGATGAAAGGGGCAAGTACCAAGCAACAACCCATTCGAGATCCTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19940:1931 1:N:0:CGATGT\' NCCGGGTAATCATTGAAATTTCATCGTGATGGGGATAGATCATTGCAACTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAACTCGCGTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19890:1976 1:N:0:CGATGT\' NTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19845:1984 1:N:0:CGATGT\' NGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19811:1989 1:N:0:CGATGT\' NAGAAAAGCTCCAAAAGTAATTGGAGATTGAGGACATACCTTATCCGTCGGTTCATCATCACTCACAGGAAGAATCACAGGGGGGTTACGATTACCTTGAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20197:1937 1:N:0:CGATGT\' NTCCTCATAAGCCCCACCCAAGAACATCCCCAGATAATAACCACCCCCACAGCCACCATTTCCTTCTCTTCCTCTCTCCCCAATGCCATGAAGGAGCAAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20385:1965 1:N:0:CGATGT\' NCCGGTTGGTGTTGTAAGATCTGAAGTTAGTACCAACAGCATCATAAACTGCCTCATCAGTTCCTTCTGATGCAGCCTTTTCAATAATACCGAACCTTTTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20297:1996 1:N:0:CGATGT\' NCAAACTTGTCTTTTCCAACACAACCAATGTAACTTGTTGCACCGGGTTTTTGGAGCATCCACTGGGCAACTCTGATTGTATTTTGAGTAGAACCTCCAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20580:1968 1:N:0:CGATGT\' NAACCTCTTTACTCGTAGTCCCACCACGACTACCATAACTCCACGGTTTAGCCAATGTAGACCATGAATACGAATCCCCACCCCAAACATCCAGATCGGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20775:1992 1:N:0:CGATGT\' NCCGGAAATTCGGTTGGCAGTTATTTTCTTTCCATTTTATCCACTTCTGCAATGACTCAGGCGAACTAAGGTTCGTGGGTCCCGGAAGACCCATTGAAATG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:21189:1926 1:N:0:CGATGT\' NACTACCTCCCCATGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:21144:1931 1:N:0:CGATGT\' NAACTTTTCAACCAAGTCCTTTGACAACAAGTTGGCAACGACCGCGTGATTTCTACAAGAGTCGAAACCATGAACATAGATGAATTTGTACTTTGCTTTAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:21129:1969 1:N:0:CGATGT\' NAGGGAAGATACACCCATGCCATATCCATTTTTGACCAGATTTTAAAAGAGGATCCAACTTACCCAGAAGCATTGATTGGAAGAGGGACAGCGTATGCTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:21013:1990 1:N:0:CGATGT\' NTTGGCGATGCTTTCTCAAAATTTGGGGCTAATGAACAATTGTATTGCCCTCTCCCATTTATCAACAATGTCTGGGGTTCGCCGACCCAGCGGAAAGGCAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:21251:1925 1:N:0:CGATGT\' NTGGACTAGGTGGTGAAAAGGGGGTGGGGTCCACAGCTGTTTCGAGGGGTCTTTCAGACTGGTAAATATCACCACTCAAGTAATCAAACGAACCTGCATCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1467:2009 1:N:0:CGATGT\' GTCATCGTCCTCATCGCATTCCCCTTTTGTGGAACTGTTTCCTTTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAATTTTTAAAAAAAAAGCATCTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1400:2057 1:N:0:CGATGT\' CCCAAACTCTGAAAACAGCTCCTTCAGCTTCTCATCATCAATGCTATCATCCAAGTTTTTGATATACAGATTAGCACCCTGATTCTTATCAGCAGCTTCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1418:2233 1:N:0:CGATGT\' GGGCAAAGTACAAGAAAGTTGGGTCACTGGCGCCATCCTTGTAATAGGCAAAGACGCAAGCACCATCATCATGCATGCTCTCACCGACGAAGATCTGAAAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1728:2015 1:N:0:CGATGT\' TTTGGTTTTTCATTGTTACCAGAGTCGGGTTCGGGTATGGCGGGGGCCTGGAGGGGGGGTGGTTTTTTTTGTTTGGTTTTGTTTTTTTGTGTTGTTGGTGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1627:2074 1:N:0:CGATGT\' GCCTGGTCCGAAGTCAGAAGGGATATTTGAGACGGCTACGAATTTAGGGCATTCAGGTTGGTTTGGTTTTGATATCATGGTTAGACTGCCGAAGAAGTAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1657:2079 1:N:0:CGATGT\' TCAGTATCGCTTCGGGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGGATGCTCTCACTCGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1724:2093 1:N:0:CGATGT\' TGGTGGATGTGAGTTGCGTGGTATGATGCCGGGGTCACGGGCTGAAGTGAATAAAAGAAGCACCAACACATGGATAGTGAAGAGAATTGCTACCACTAGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1651:2104 1:N:0:CGATGT\' CTGTGGATTAGAAACCGGTGGAGTGTAACGTTCTTTACCGCCGGGTTTAGAAGAAGCATTGCCGTACCAAAGCATGCCTAAGATCGCGATAATCAAGATCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1598:2205 1:N:0:CGATGT\' CGGGGGTTTGCTGATGAAATTGAGGGGATTTTGTGTTAAAATGGATCACCTAGGGTTTTGGAAGTTTGTTACTGTGAGGAAAAAGGAACTTGACTTGTTAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1665:2216 1:N:0:CGATGT\' CTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGTTAGCGCGCAGTTGGGCACCGTAACC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1737:2233 1:N:0:CGATGT\' TTCACGGATCATCTCATCGACTTCTTCATCGGTGAGCTTCTCCCCGAGGTTTGTCATCACATGACGTAGCTCAGCAGCTGAGATGAAGCCATTCTGGTCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1520:2247 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGCCTTCTGTTTGAAAAAAACCACCGCCACTCTCTCCCCCCTCTCCCCCCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1928:2148 1:N:0:CGATGT\' GAGCAGTATAGTTAAGGTTGGCCTTAGCCCATGGAACAACACGGCAAACTGCTAGCGTTGGACCAGCAGCGACAACAGAAGTGATAACAGCCGCTTTAGTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1772:2182 1:N:0:CGATGT\' TTGTCAATAGCTGTCTTGAGCAACTCAAGACCCTCCTTGTTCTCCTGAATGTTAGGAGCAAAGCCACCCTCGTCACCTACATTGGTTGCATCTTGACCATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1894:2201 1:N:0:CGATGT\' ACCAACTTCTGTTGCGATTTCGATGCTCTGCCACCTTGGAATTCATGGTCTGCTTTTCTACAATCATCCTTATAATCCACCTTGGAATTTGTTTGATTATC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1966:2247 1:N:0:CGATGT\' AGACAAAAGTGCTTGAGCAGAAGAAGAATGAGGGTGAAGAACCAAATCATAAGGAGCCCAAAGCCCATCAACAGGACAAGGTCTACCAGCATCAATCCTGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2114:2022 1:N:0:CGATGT\' CCACGCTTGAGATCCTTCACAGCAACGTTCTTGACATTGAAACCAACATTGTCACCTGGAAGAGCCTCAGGAAGAGCTTCATGGTGCATCTCCACTGACTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2137:2035 1:N:0:CGATGC\' CCCCGCTATCACCGAGAATAATGACTTTCAAAAGAGTTCTCCTTCGCGAGGACATCCTCGCTGGGCTTGCAGTTGCAGAAGTAGAATTCGACCGATCCAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2051:2037 1:N:0:CGATGT\' TGAAAACTTAAACAAACCCTGCGGCTCACACTTAACTGAGACATCCTTGGCATCAGGTAACACAACTGTCAAATACAGTTTGTTGGAGCGCTGAGCCCAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2209:2090 1:N:0:CGATGT\' TCAGTCATCATGAGTTCAAACAATGGAATGCAGGTAGTCAAGTACATCTCTCAGGGGGTCGGATATGGTAGCATATGAGTTTACAGGCCCTCCATCAATAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2111:2123 1:N:0:CGATGT\' GGCAGCAACAAACCCAACCAAACGAGCGTAGAAATCCATAGCTTACAGTGAGCGTAAAAGCAAAAATGACGCAGCAACAGCCAACCTCACCTACTGCAGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2227:2131 1:N:0:CGATGT\' TCGGTCAACCTTACACTTAGCACCAGTAGTAATAGCAGGAGTTGGATTCTTAGCGGTAGCATTTTTAGGAGGAGATCCACGGATCCCTTGACAGTTGACCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2050:2154 1:N:0:CGATGT\' CAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCGGGTCAGAGCGTAAGCTAGTGATGCTTTCGGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2012:2202 1:N:0:CGATGT\' GGCGTACAGGTTTGAAATTTGGGAGTTGGGCCATGCAAGAATGAATCAAAAGGAGTGAGTGGGGGAGTCATTATCAAGCACTCTTTCTTTTTTTTGTTTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2134:2227 1:N:0:CGATGT\' CGAACACGACGGGGCTCTCACCCTCTCTGGCGCCCCTTTCCAGGGGACTTGGGCCCGGTCCGCCGCAGAGGACGCTTCTCCAGACTACAATTCGAACAGCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2125:2243 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAACGATTCTCCAGACTCCAATTCGAGCAACG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2336:2003 1:N:0:CGATGT\' NTGAGGTTTTCGACGTTCTTAGCAAACTTATCCGTAGTGTCAGTGGCAAACAAGTTGGATTTGGTCAGGTCATCGTTTGTTATGGCTTCCCGCTGGCGATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2412:2046 1:N:0:CGATGT\' GATTTATTCCATGAGCTATTTAGCCAAAATGTGCATCATTTGACCAACATTATGCCTCACAAAGTTCACACTATTGATGTGCATGAGGGTGAAATGGGCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2382:2056 1:N:0:CGATGT\' CTCGTTTAGAGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2467:2115 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAACACACATACACGCACTCTATACCACTCTTGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2262:2140 1:N:0:CGATGT\' TGCGATTTGAAGGTCTAGAAGTTAAGTACCAAAGGCAATAGCACTGATCAATGACACAGGCTACGAAACTCCGTGACTACTGTTAGAAATATAGCCTCTTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2307:2170 1:N:0:CGATGT\' GTCAGTAGCTAGATATGGATAAGGGGGCATCGAATACATATGGTGAGCTACAACAATAGTTAAAGAACCTAACATAGCTAGGTTAAGCGATAATTGAGCAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2371:2189 1:N:0:CGATGT\' CTTACACGTGGCACCATCTTGTACCCCCAAGACATCGTAGAGCGACTTCGTATGAGTAATGGCCGTGGCGCTTGGTGGGGTGTCCACGGTGGATGACACGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2351:2193 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAGGAAGAGCACAGGTCTGAACTGCGGCCACCGATG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2366:2209 1:N:0:CGATGT\' CGGCCCACTTGGAGCTCTCGATTCCGTGGCACGGGTCAACAAAGCAGCCGCGCCATCCTACCTAAAAGTTTGAGAATAGGTCGAGGGCATTGCACCCCCGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2402:2214 1:N:0:CGATGT\' CTTGTTCGAAAGATGTAAAGAATCAAGTAGTTGAGTAACTACGTCCTCATTGTTAAAAGGCACATCCAAATTCACCTTAACAACCATATTTTCGAAAGAGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2427:2231 1:N:0:CGATGT\' ATCGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCGTCGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2653:2019 1:N:0:CGATGT\' CTCTGACTCTACTTCGACATTTGATCTAACACCGGCTCTGGAACTCCGAACAATCTGAACTGACTCAGCCTCTGTCACTTCATACATAGTAGAACGTTTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2530:2059 1:N:0:CGATGT\' CTAACCTTTTTGTTGTCCTTAAATACGACAATACCACTTGATGAAACACCAATCAAAACGTTTGTTTTGAACTGATCTTTGGCATCGAAAAATTCCACCCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2526:2076 1:N:0:CGATGT\' CAAACAAGCAGAATATGTCATCTTTCACTGCAAACGACCTGGGGCGAAGAGGGGATTCACCGTCATGAGTAAATGCAAGCTGACCATAATCACCAACGTTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2581:2077 1:N:0:CGATGT\' GTTTTGCAGTTTCTATCACTTCAGCAACATCAGCTTCTTCTGATATCATAGTTGTTAATGCAGATTTCATTTCTGTCAGCTTCACCTCAAACATCTTTTTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2743:2082 1:N:0:CGATGT\' CCAAAACCACTAGCAGCAGCCATTGCTAGTGTAAACAACGCAACTGTCATAACTGAAACTTTACTGCCACCACCTTTCACCTCATCAAAACTGTCAGAAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2681:2104 1:N:0:CGATGT\' GGCGCTTTGCTGGTATGGTCGATGCATCCACCTCTCCAATGTAGTATTTCTCCATCATCTCTCTCGCTGAGTCACTGTGGCCCACATCTTCGAAATCATTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2533:2124 1:N:0:CGATGT\' GTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGAATTCGACTTCCATGACCACC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2715:2146 1:N:0:CGATGT\' CACAATCTCGAGAAGAAAAGAAACTACAAGATCCTGAGATACTGAATGGATAGACATAAACAGCAATGAGAAAGAAGCACACCATAGAAACCAGTATAATG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2654:2168 1:N:0:CGATGT\' CCGACCCATCAATTCATCTTCTTCGTATACGTCGTCGTTTCCGATATCAAATTCCAAACCCGTGAATATGAATACGAATACGCAAACTTGGCAACCAGGTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2532:2242 1:N:0:CGATGT\' CTCTGATACAAGAATAGAAACAGCACTGATGGCAGAGAAAACAGCTTTATAGGCAGTCTTCAGAGCTTCATCTAGAGTTACCAAATCCATCTTTAGCAATG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2687:2249 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAATGGGTATTGCGCGTACGCTTCCAACCATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2973:2014 1:N:0:CGATGT\' CTCATAAGATGTTACACAGCAGAATCCACCTTCATAAAACAAACAACAAAATTCCCTAAGTGCTCAAATTCAAAGCAGAAAACATTCAGAATATAGACTGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2896:2026 1:N:0:CGATGT\' GTCACCCTTCGCTCCAAACTAGTGTATGATGGCATTGTTAATACCATTTTGTACCCCTTCATTGCTGCCATAAAGGCCATACTGATCCCCATATTCCCTGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2773:2071 1:N:0:CGATGT\' TCCAAGCTTTCTTCTTTCCACCAGTGGCACGTCTTTTGTGCATGGAATCACGTGATATACCCATGTTTGGAAAAGGGAGATAAAACTTGGGTTCGTAGTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2909:2147 1:N:0:CGATGT\' CTCCGAAGAGAAATCCAGCAGCCTGGTCTTCGTTACCATCAAAAAGCTTGAGAGCTTCGATCACAGCACTCCTTTGAAACCCCAGCTCCACCCCGTTTGCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2877:2172 1:N:0:CGATGT\' GGCAGACCTGTCAACCTTTCATAGTTGAGATGGCAAGTGCAACGACGGGGTGTTTGGGCTGCTGTCCGACTGTTCTTGTGGATAAATCTGCCCTGCTAATC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2872:2190 1:N:0:CGATGT\' CGGTAGATCCCTCGATGACGTCAATAAGGCCATCGGTACCTTTAGCCAAGGAGCAATGATCAATCCAAATATTTGAAGATTGAAATATAGAGATGCCATCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2881:2226 1:N:0:CGATGT\' GCCGAAGGAGCCTAATGAAGATGGACTGAAAGGCATATATAGAGTGGATGTTGAAATTCCTGCAGATGACTGGGTCAATATAACGAAGTTCTATGATGTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2789:2239 1:N:0:CGATGT\' ACAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2815:2240 1:N:0:CGATGT\' GGATGCAAGACATTCAGCAGCAGCTTGTAACATGTCGTCAGTAATCAAGCGAGCACCTGAAAGCAACGCTCCTAAACCAATCCCAGGAAACAGGTACATAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3184:2005 1:N:0:CGATGT\' NAATCGTTGTATGGTGAGACAGTTATCCTGAATCCGTGCTTCATATGGAGTAATATGGATATATCAGGCTCGACAACTTGTCCCTCAACAGCTTGTATGTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3120:2036 1:N:0:CGATGT\' GTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGTCACACCTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3192:2068 1:N:0:CGATGT\' GGTTGAATGGGGGGCCCGCAGGCCGACGCCTTGAGCGCGCAGGTGCCGTGGCACGCTGTAACAGCGCGCGCTGCCTACCACAATCGCGAGGACAGCACTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3054:2083 1:N:0:CGATGT\' GGGAGCTTCGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTACTCCGTGAGTCGGAGGCGGGGCACAGCCCCATTTTTTGGACCCAAGGCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3224:2088 1:N:0:CGATGT\' CTAAGGCCGACTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCCGGCCCGAGGAAACC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3248:2170 1:N:0:CGATGT\' GGGGCCTAACCTTGTTCTTCCACAGGTTATGGTAGGAGGCAGAATCTGCAGCCCTTTGCATGACCTCAACCACAACAAGGTGGTCGGTCAATGGCCTAATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3163:2193 1:N:0:CGATGT\' CTACGAAGCCCAAGATATAAAAGCCCAGTCCAACGTGGACGCCATGACCACCCTATAATTAATCCGATCATGACGGCGACCCATATTGGTACTGCACATAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3237:2212 1:N:0:CGATGT\' ATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGATCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCCGGGGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3086:2218 1:N:0:CGATGT\' GTGGTATTTCACTTGCGCCGAAGCTCCCACTTATGCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3169:2238 1:N:0:CGATGT\' CTGAGAACACCCTCACCGCTTTCAAAGGTCTCAGGGTGCTGTTAAGCGACAGTGATGACATGAACCGAGCCGTGTCTAAGAAGCTACTCGAGAAACTGGGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3321:2075 1:N:0:CGATGT\' TGGCAAACTATAGAACTTTCCAAACTCACCACCTCCAGGCTTGGGTAGACTGGTGAAGATTCCTTTGAAAGGATGCTCGGAAGCTATAGTAGCAATCTTGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3343:2075 1:N:0:CGATGT\' GTTAATGCTTCTCCCAATATCGATGCAGCAAATCCAAGCATAGCAACACGACCAACAAAGAGCTCATTTTCCTTGGTGAATCCAATTCCTCCTGATGTTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3357:2098 1:N:0:CGATGT\' GCAATCGGTTGGACAGCTAAGGGAAGTTTCTAATAAGGTCCACAATGCAGAGCTTAAATTATTCTTGGAAGTTGAGCTTGGCGTGGATTTGCGACCTATTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3411:2115 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAACAAACTCTTTAAACTTTTTTCGAAAACAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3350:2120 1:N:0:CGATGT\' GCTTCTTCGGTTTTCTCTGGAACGACTACCTCTGGGGCAGGAGGGGCTGGGGTCTCAGTCTTTTCTATCTCTGATGGTTTAGACTCAACAGGTTTTTCTTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3369:2137 1:N:0:CGATGT\' CGCAAGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTCGACGCCCGGGGAAGGCCCCAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3348:2146 1:N:0:CGATGT\' CTCTATGCATAGCTTGGTATTGGCAGGAACAAACAGGACATCACCCACATGGAGTTTATCTGCAGAGATGCATGTTCTTATTGTTCCCATCCCTTCAGTGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3442:2156 1:N:0:CGATGT\' TGGGAATACGAGTTGGAAGAGCTATTTGACGGGTGAATTCTCCCGGAGGGCAGTGCTCGGGCGTTGGATCACTTAGTTTGAATGTCCTACCATGTCTCTTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3407:2165 1:N:0:CGATGT\' GGGGAAGTTGCTGCTGTTGGAAGTGTAGTCCGATCATTAACTGTGGGACAAGAGGTTTTTGGAGCCTTGCATCCAACTGCTGTAAGGGGCACTTATACGGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3300:2204 1:N:0:CGATGT\' TACCCCTTCTTACCCTGAAAAACAGGGTCACCTTGCGTCCTTGAACCGATAACCATCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCGGGACCAACAAGGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3391:2222 1:N:0:CGATGT\' CAAGCATATGGAAATTGGCTTCAATCAATTTCATGTTGATGCCACAAATTTGATCCACCGCAGGGCTGGCCGTTTCAAAATTAAGGTTGTGTTTGGTTTGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3632:2027 1:N:0:CGATGT\' AGGAAGCTGTGGTTGTGGTTCTGCCTGCAAGTGCGGCTCCGCTTGCGGAGGGTGCAAGATGTACCCAGACTTGGTAGAGGCTTCAGATAGCCCCAACGTTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3642:2044 1:N:0:CGATGT\' ACCTTCAGAATAATTTTTTGGTTGTGCAAACCAAAGGGAATAATGATCTTGGGTAGTACCAAGTCGGAAACCAAGTGGATTTATTTTTTGTCCCATACTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3580:2051 1:N:0:CGATGT\' GCCTTGTTAACCTAATTACATCTTTCATGATCTTTCAATTCACTGCACACGGGTCTTCTCTTTGCCAAATATTTTTGATTTCAGAGGAAACCGAATTGACG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3507:2069 1:N:0:CGATGT\' CCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCAAGTACCATCAAACAAACTATAACTGATTTAATAGAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3642:2073 1:N:0:CGATGT\' CCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAACATCCGAAAGGACCATCGCAATGCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3674:2098 1:N:0:CGATGT\' CGGGCAACACTCTGAAAATTTCATCAATCGGTTCAAGCATTCCAAGAGCAAGGCAGTGTTTAGTTTAAAAGAAATCATGCTCCAGTAAAATAGCTTGAGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3545:2185 1:N:0:CGATGT\' AGCAGTTCCTAGCTCGAGCTATTTCACCATTTTTCATTTCAAACTTGGCATAACGTATCCATGCCCCAACTTTAGGATGGCACTGCACAAACCTCTCATAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3876:2014 1:N:0:CGATGT\' CTGTGGACATAATCTTCGGTTGTAAGAGGGAAACTGTAGTTGATGACAACTTCAACATCTGGAATATCCAATCCTCTTGCGGCCACATCAGTCGCTATCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3999:2062 1:N:0:CGATGT\' GTATAATTATTATTTTTGCACACGATGCAGACCAAGTTGTCGTGTGCACCATTTCCAACGGGCACATCCTGCATTTAAAAACGAAATTTTTTTTTTTTTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3965:2064 1:N:0:CGATGT\' AGGAAGTCCAAAACCACCAGCAGCTTCCTTTCCTTGGTCAGGCTCAATAACTACAGGGGTACCTCCAAATGGAGCATCATTTGTTTCTTTAAGCTTTTGGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3828:2105 1:N:0:CGATGT\' GTCAGTTCCAGAGCCAAAGATCGTAGTTCTCGAACGAGCAGTCGAAAAGATTCTGGAGCATTCTCGGGGTTAGGTATTATTCCCCCAATGATCGTAGTACC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3956:2129 1:N:0:CGATGT\' CAGATTTCAGGCAGATTGGAGCATAAATGTTGTAGATGTCAATGTTTCCTACTTCTTGGGCTGCTTGATCGGCTGCATCCTCACACTCTTCCGAAACAGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3880:2191 1:N:0:CGATGT\' GACGAAATCCAAATTATTAGTCCAGTAATAAGAGTGATCTCTCCTGCTAAGTATATTCTCCCTTGTTTTTGCCACCTCCACACCTGATTTTGGATTTGGTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3859:2214 1:N:0:CGATGT\' TTCCACTTCTTGAACTTTCCGCCGTGCTTCTTGCCAAATTTACCATGACCATGCTTGAACTTCCCGCCATGACTATGCTTGAATTTTCCTTGCTTGAATTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3990:2250 1:N:0:CGATGT\' GGGAAGACGAACACGCAAGTGGAGTCCCATTCTATGAAGTCTACTACGGTTTCTTATGCTTTGTGCGGTCCTTCCTGTTACTTCAAGCACACTAGCTGCAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3921:2250 1:N:0:CGATGT\' CGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCGACGATGAAGCTTATCCCCCATCGTCTCACTGGCCGACCTTGACCCCTGTTATTTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4196:2020 1:N:0:CGATGT\' CGCCAATCCGCCACCACTCAATTTTCCGCCAGCCCTAACCCTAACACGCGCGTATCGGAGCGCGTCTAAGAGAAAGCGCGTTAGATATGGGAGCTGAGATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4153:2062 1:N:0:CGATGT\' TTATTTATGAGCTCTTTATATTCCCAAAGAACCTCGAAAGTGGTAAGGGACCATCACCCTTATCGATGTCGCTAATGGAATTCTTGCTTCTAGATCTGTGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4102:2101 1:N:0:CGATGT\' CCGGGAGGTTGGTTGATAGTTAGGGATGATGGCGAGACCATTTCCGAGGTGGAGAAGATGGCCAAGTCACTTCACTGGAAATCGCAGTTTACTTTCTCTAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4103:2125 1:N:0:CGATGT\' CCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4021:2132 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAGACGTATAACGGATACGTGATGTGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4178:2154 1:N:0:CGATGT\' CTGATGCAGCTTTTCTCGACTTTTGCACATGCACAAGTTCAATTTTCAATTTTTGCACCAATGTAGATTTTCCACCAGTGATCATCCATAACTCGCCTAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4209:2174 1:N:0:CGATGT\' GCAAGCGAGAACAGTTTTTTCAAGATTTCGCTGAGTCGATGATTAGACTTGCTAGAATTGGTGTGCTCACAGGTACAGAAGGTGAAATTAGGAAGGTTTGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4193:2213 1:N:0:CGATGT\' CCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTTCGGGCCTCCACCAGAGTTTCCTCTGGCTTCACTCCGCTCAGGCATAGTTCACCATCTTTCCGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4150:2215 1:N:0:CGATGT\' AGACCCAAAGTCTGTGTTTAGCTGATCCCCACGAGGAGTCTTCTCCAATTGATTGATCCTCTGTTCCAATTTCTTCAAGTCTTGACTACTCAGAGTCTCCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4040:2236 1:N:0:CGATGT\' CTGCTCTTCAATGCCTTCCTTCAAGGTATTTTCTGATAATGGACTTTCATGCATGGGCTCACAACCTTTCGAAACCTTTTCTGTAACTGATGAACCCGAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4459:2015 1:N:0:CGATGT\' CAGCCTTTTCTTTCCCACATAACTGTTCAACTAGTGCAACAGAATATTCCATTGCTGTACCAGGTCCACGACTCGTCACAACTTTACCATCCTGCTGGACC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4254:2021 1:N:0:CGATGT\' GTCAATATTGTCTTAGAAGTTCACACTCATTTCACATCCTTGTCACAAGAGCTAGAGTAACATAGTCACCCCTCTAACTTGCCCTTCAAAGTGTACACTAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4280:2023 1:N:0:CGATGT\' TGGGAATGCAGCCCCAAGCGGGCGGTAAATTCCGTCCAAGGCTAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4311:2061 1:N:0:CGATGT\' CCCATTCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4255:2121 1:N:0:CGATGT\' CACCGCTCTCCGCGAATTGTAATGCAACCTTCCCGCCCATAGAGTGCCCGATAATGACATCCGGCCAATTCGAACCTTGGGATTTCACAAGCTTAGCCAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4470:2167 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAAAACCACAAACACGCAAGCACT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4530:2025 1:N:0:CGATGT\' CGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACTCAATGAGCCCGGTATTGTTATTTATTGTCACTACCTCCCCAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4521:2063 1:N:0:CGATGT\' CGATACGCATATTTCATGAATAAATACAACGAAGATACAGTAAATGAACAGGTCCTTCGAATTCAAAACGCTTGATAAACTATGCTTTTTGTATGTACAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4542:2075 1:N:0:CGATGT\' CCGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4736:2118 1:N:0:CGATGT\' GTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4590:2146 1:N:0:CGATGT\' AGCGATATTCGGACTTCAAACACTCGATGAAAGAAGCATTAGAGATACCAACACGAAAAAAAAGTACGAGAAAGAAGCTTCTCGTAGATGAATCTTCGGTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4506:2153 1:N:0:CGATGT\' CTCGAAGCCAAAAAATAACAATCCTTCCACAAAAACAAAAGGTAAAATTAGAAAATCTTGTGCAAGACTTCAAATAGTTTTGTAACTTAGAAAAATCAGCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4725:2205 1:N:0:CGATGT\' TTATTGGAAACAAATTGTCACTGATCTTATACAGAATCTTGATTTAGACTAACAGTTCAGTGTTAATTAACTTCAACAATCCATCCTTTCTTGTCTTCAAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4612:2250 1:N:0:CGATGT\' GTTTATATTTTCACTAAGAAAATAAACAATAGTTAAGGTGCATGATATCAATATAGTTTATCTAAAGTGGAAAGATGAAAAAAGGAATAATATAAAACAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4863:2020 1:N:0:CGATGT\' CCTCCACAAGCGAAGATCCAACTGAATGTCCCTGAGCTTTGTAAAAGGTGAAAATCATTCCTCCACCGAGTAGAAGTACATCGACCTTAGCTAACAATGAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4898:2021 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAGAACCTAACCGTAGACAAGGCATGCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4775:2060 1:N:0:CGATGT\' TTTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGTTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4830:2072 1:N:0:CGATGT\' CAAAGTGTTGCCACCATAAATAATGCAGGTACTTATTACAGGAACTTGATCAGCCATATCAAAGTAGGGTCTCCAAAGAAACCGGGAGCGATCGAAACTTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4848:2072 1:N:0:CGATGT\' CGAAATAAGTGACAAGATATGTTACAATCATATCATACATACCCAACACAATGTTAACCAAAGTCATCTATTGATCATCTTCCAAATCTTATCACATATGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4784:2086 1:N:0:CGATGT\' TAGCCGTTGATGATGGAAATGATGCTTCCGGCTCTGGTTTCCACAAGAATACAAGATTTTGGCCTTTCTCTGTGGCGATTGAGTGCAACGGTACAAATGGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4914:2086 1:N:0:CGATGT\' TGGGACCCAAAACTACTGGGATGTGTTGAGCTGCCGGAACCAATGATGAGAACACCCTGTTGTTTAAGCGAAGAGATTGCTTTGCCCATGTTGTAATGATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4839:2092 1:N:0:CGATGT\' ATTCATTTCAATTGGCAGTGCAGGTGCTGTCTTGCCCCACAAATGATACACACAACAGCATGTTGCGCCGCGCTACACCAAGATTCATCAAACAAATTGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4928:2130 1:N:0:CGATGT\' GTCATTGGCCTTCGCTTGCAACTTTATTAACACATCACACAACTCCAAAAGCCATAAAAGGTCTAGAATCTAAATACATAGATACCATCCTTCACATATTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4866:2131 1:N:0:CGATGT\' CCCGAGGCAAAGAGTTTTTCGTTTCTAACGGCCCTTTGGATTCATTATCTGCGAGAAAACAGCACTTGGTGTCAGGCCATCAGAGTCTTCACTAGCGAGAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4823:2136 1:N:0:CGATGT\' TTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCTAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4827:2196 1:N:0:CGATGT\' GCCAGAACCGCAACCACAGTCACCACTACAGCACGACATTTTCTGTTTCTTAATAATATTTCACAGCTTAAAAGGTTGGATTAGATGAGATGGTTCCCCCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5190:2002 1:N:0:CGATGT\' NCCACCAGCAACATTACTTGCAGCAGAAGCCTCTATCTTCTTCTCCAAGAAAAGGCTTGGATCATTATCATCATCTCCCAACAAATCAAATGGATTTGTTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5062:2027 1:N:0:CGATGT\' CTTTCTAATATCCACATCACATTTCATAATGGAATTGTAGGTTGTCTCGTGGATACCGGCTGCTTCCATACCGATCAATGAAGGCTGGAAAAGAACCTCAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5114:2028 1:N:0:CGATGT\' CCCGATTCCCTTTCGATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5167:2041 1:N:0:CGATGT\' CCACGCTTTCACGGTTCGTATTCGTACTGAAAATCAGAATCAAACGAGCTTTTACCCTTCTGTTCTACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5190:2138 1:N:0:CGATGT\' CCGGTTCTACCAGGAGTCGATTTTCCGGGCTTGAATTTCGTCATATCAACAAGATCTCCGAATAGTTTATCGTCACCCTTAGGTTGCTTTTTCATAGGGGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5027:2148 1:N:0:CGATGT\' GAAAGAACCATCAGTTGTCTCGGCATAAAGCTGCATCACCGGCTCAGCAACATGCTTCCAGTCAAAATTAGACAGTGGTTTGCAAGTTTCCCACTCAACAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5209:2171 1:N:0:CGATGT\' TCAGAAACAGGAACAGGGCTAGTGTTCCCCAAATTAAACACTCTCAATTGAGCCGGTCCGTGTTTCTTCCCACCACTACCAGTACTTTTCTCTGCAGTATC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5116:2230 1:N:0:CGATGT\' ACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACTCAATGAGCCCGGTATTGTTATTTATTGTCACTAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5036:2244 1:N:0:CGATGT\' ATTGAAATTGAATCAAACTGGACAAGACTGATTTGAACTGAGAACACGAATTATCAAAAGTATCGAGCATCAAGGATACCTGAACAGGATCGACTAATGAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5343:2032 1:N:0:CGATGT\' GTAGGGTAAAACTAACCTGTCTCACGACGGTCTAATCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCCCACTGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5499:2034 1:N:0:CGATGT\' GCAAAGGATTCAACCCGCCGCTCGGTAGAATTGTGATTCAGAGCGGCCCTCACGGTGCATCCACCGCGATGGCTTGGCCCACGACACGTGCCCTTGGGGGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5361:2040 1:N:0:CGATGT\' GAGGACAGGAAAGCAGCAATGAATTCGGTAAACCCGAAATACATACTGAGAAACTATCTGTGTCAAACAGCCATAGATGCTGCAGAACAAGGAGAATTTGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5336:2078 1:N:0:CGATGT\' CGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAGAAGGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5492:2085 1:N:0:CGATGT\' AAGCAGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAACAAAGGAATTACCAAGAAGACTGAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5382:2103 1:N:0:CGATGT\' CAGGGACGTAGTCAACGCGAGTTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAGTTGCAATGATCTATCCCCATCACGATGAAATTTCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5441:2169 1:N:0:CGATGT\' TTGCAGACTCGGTAATTATTGGGGCTTGAAGGATTTGGTAGACATCAAGAATTCTCCTAGGGTACTTTGCCTTTTCTTTCTTATTTTTGGTTTTTGTTTGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5279:2184 1:N:0:CGATGT\' CTGGTAACAATAGCTGAAGTGCAGCCTCAAATACTCCATAACAAAAGATGATTTTGCATGCAATAAGTGAGGGTTTAGGCCATATGTCAATGAAACCTTGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5333:2187 1:N:0:CGATGT\' GAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCGCGACGTCGCCGGCAGCGAACCGCCCACGTCGCCGCGATCCGAACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5485:2206 1:N:0:CGATGT\' ATGTCTAAATACATATAATATTATGTATACATTATTCAAAAATTAAATTCAGACAAAAGCCTCTCATGTAAAAAAGAAAACAATTTATTACTTCTCTGTTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5564:2020 1:N:0:CGATGT\' GTACTAGACACATTTAGAAGCAAATACAACTGACTCTTGAACTTCCAAACAACCCCACCAAGACAACAACCATAGTTCTAAAATCCACCACGAAGGCGAAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5529:2121 1:N:0:CGATGT\' CTCAAACTTCCGTGGCCTAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGATCGTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5672:2144 1:N:0:CGATGT\' CATTCCTTTGTTAAAACCTTGGCTAAAACTCTCTACAAGACTGGCATATTCCCAAACGTTACTACCATGGGCAATGTTGAAAGGGGTCTCATCATCACTCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5740:2195 1:N:0:CGATGT\' TTGCCGCTTTGAAACTTCCATTAGATTTAAGAGCCACTAGTGGCCTCCTTAAATCTACTGGAAGCTTTAAAGCCGGAAATGCTAGTGGTCCTCTTTATTCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5506:2239 1:N:0:CGATGT\' GCGGGGTAGGTGCACCCTGACCTCTGGATGATAACACCGGCAGCGTAGTTACCTGCCCTGACACAATCGGCAATAGGCTTCCCTTGAACCAATTGAGACCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5995:2057 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAACCAAAGAATACTAATAAAAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5883:2057 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAGTGATATCTTGTTGGTTCGCCAGATGTTCAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5786:2091 1:N:0:CGATGT\' GCAAGTTGATCGTTTGACACGTGAATTTCATATTTACATGACCCGTAACGGCCGTATCAGTATGGCTGGCGTTACAACAAAGAATGTCGAATACCCGGCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5790:2114 1:N:0:CGATGT\' ACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAACTAAGGCCAGGAGCGTATCGCCGGCAGAAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5967:2174 1:N:0:CGATGT\' GCCAAACAGCAAAAGCAAAACAGTAGCACCGACGGACAGCACAACATCGAAAAATTTTCATCGAAAAATTCCTGTCACTACAGCAATACCAACAACCTGCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5861:2234 1:N:0:CGATGT\' CTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAACTAAGGCCAGGAGCGTATCGCCGGCAGAAGGAGCAAGACGACCGGTGCACACCGAAAGGCGGAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6226:2002 1:N:0:CGATGT\' NGCCGTCTTAGAGCAAGTATCCACCGTCGTACCGCCACCACTTACACCACCGTCAACCACCTCTCTTCTTCTACACATGAAGAAGTTTCTACTTCCCAATG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6169:2009 1:N:0:CGATGT\' CTGCCATGATCACACAACAAAGAGAAGCAACAGACAAAAAGTAAGGCATTCTAGAAACAAGAGGACCTGATAGAAATTCAAGAAAAGCCTACCTGTTCAAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6245:2017 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAACAAAAAAAAAATAACATGAAGCCTACACCTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6027:2024 1:N:0:CGATGT\' CCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACAGCCGCTCCGCCCAGGCTCACGCCACAGGCTTTGCGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6224:2039 1:N:0:CGATGT\' GCTGAATTGGATACATTACAACAATCTCAACTAGCATACCCACCGCAATGGAGACAATACAGAAGTTACCAATGGATGTAAGTACTTTCTGGAAGTGACCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6019:2040 1:N:0:CGATGT\' CAAACAACATCACTAACATTGACAAGGACATAATCGTCTTTTCCATCACCATTACAATCAACATTAATACCACCACTGTCACTCACAGGAGGAAGATCTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6204:2079 1:N:0:CGATGT\' TTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGCGTCCTAAAAGTAACATCCGCCGATCCCTGGTCGGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6003:2083 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAGAAACAGAAGTAATTAAAGAGGCTACGCGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6103:2139 1:N:0:CGATGT\' CGCCATCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCATTGCACCCCCGATGCCTCTAATCATTGGCTTTACCTGATAGAACTCGTTTAGAGCTCCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6135:2156 1:N:0:CGATGT\' GGGTGCCCTTGTGCAGGATATCCCGTTGGAGGGTACGCGTCCTTCGGGTACCCTTCTGGTGGCGGGTATCCTTGAGTTGGTGGAACACCAACGGGGGGTTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6030:2174 1:N:0:CGATGT\' TGCGAGCATCATGAGAATGAGTAGACTGAATTTGGTTCAACAATTTGGAGTCTTCAGAAGTGACCGTTGTCACTAGTAGCATTTTGTTAGTAGTCACGCTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6354:2070 1:N:0:CGATGT\' ATAAGTATCGAACAAAATTGTAATCAGGACTTCTCCAGTATGTCCACCATTGTTTCCAAAGGCATGATTTAAACTGACCCCATGTTGATTGGGCATATTGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6444:2076 1:N:0:CGATGT\' CCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6457:2115 1:N:0:CGATGT\' AGAATATCGAAAGTCGAATACTGTTTAATATGAGGTGGCACATGGCTACGTAGCGCAGCCATCTCCTTAGCCCCGAACAAGAAGGCGTTCGACACGAGGCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6315:2119 1:N:0:CGATGT\' AGATCGGAAGAGCACATGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAACAAGTGACGATGTACAGAAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6493:2148 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCCTATGCCGTCTTCTGCTTGAAAAAAAAACAAGTAGACGAAGAGTGGCACAGATTCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6415:2216 1:N:0:CGATGT\' CGGCATTCTGGGAAGAGGCAGCCCCAGCTGATGCAGAAACCAAGCCAAGTGATGCGGAAACCAAAACAAGTGATGCAGAAACCAAGCTGGTTGAAGTGGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6343:2230 1:N:0:CGATGT\' CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6602:2051 1:N:0:CGATGT\' GACGGGTTCGGGAATGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAAGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6652:2057 1:N:0:CGATGT\' CGGCCGGGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6504:2079 1:N:0:CGATGT\' CTTCTTTTTTCTTTCTTCCTTCATAACATACATTAAGGGTGGGGTACAAAAGAGTAATCAAAAGGATAATAACAACATTTAACTTAGTTAGGAAGTAACAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6743:2121 1:N:0:CGATGT\' GCCGAATCAACTAGCCCCGAAAATGGATGGCGCTTAAGCGCGTGACCTATACCCGGCCGTCGGGGCAAGTACCAGGCCCCGATGAGTAGGAGGGCGCGGCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6617:2136 1:N:0:CGATGT\' CCGATCACAAGAAAAGTACTAAAATTGACTGAGACCGAAATCAAACAGGAAAGTATGATGAAAACCAGAACTTGTGGTGTATAATTAAAAGAAAAAACATC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6666:2142 1:N:0:CGATGT\' CCCATACATGGCATCATGGCGGCCTCTAGGCCCCCACAAGTTATGGCCCCATGTGATGTTATTGGCATAGCCAATAACATGATACATAGGGAAATTGCTAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6572:2145 1:N:0:CGATGT\' TGGAAGGCCAGTTTTCAAATGATGATGGGACGGAGCTGGTACGTTTAGCTTCAAGATGTTTGCAATATGAGCCCTGTGAGCGAGCAAATCCCAGGTCATTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6581:2180 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGATCAGAAAAGTAAAGATACACGAACAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6606:2233 1:N:0:CGATGT\' CGGTGGCGCGTGGTGGAGAAGCGCGTTAGGACCTCCTGAAGGGTTGATAAAAAGCATGTTGTGTGGGTTTTGATTATTACTATTATTACTATTATTATGAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6826:2009 1:N:0:CGATGT\' CGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGATCAGCACTCGGTCCTCCGGATTTTCATGGGCCGCCGGGGGCGCACCGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6938:2010 1:N:0:CGATGT\' CTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6885:2038 1:N:0:CGATGT\' CCTAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6852:2068 1:N:0:CGATGT\' ACCATTACATAATTCAAGGAATAACCAACAACAATTCAAGCAATCAAACTCCCCCTTCATCAACCAATCTAATCTAGACTTCATCCTCATCGAGCTTGTAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6806:2078 1:N:0:CGATGT\' CCAAAAGCCCACCACAAGTTCTGCTTAATAGTTTTCATTGTTAATTTGCTTAGCTCCAATGCATCAACTACTTGTGAAAGTTTATTGCCCATTAGTACAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6820:2102 1:N:0:CGATGT\' GGACGACCCCGAGACATGGAATGTTCAGTTATTTAGATCCATTGATGGTGGTGCTGCTTTTGATTTTCCCGATACTCCTGAAAAAGCGGCCGAAGCTGGGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6827:2143 1:N:0:CGATGT\' ATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6988:2214 1:N:0:CGATGT\' CATAGCGACTTGGTATACTGGCAAGACGAGTGTATAACAATTGCTTTGACAAGCGGTTACAAGTCTCAACAGTGGGTGGCTCTTGGATGAATTCCTTGTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:6905:2222 1:N:0:CGATGT\' GCTGCGAATAGCATAACCCATTTTTTTCCTTTTCCGGGTAAAATCCAAACCCTGATTCACTAATCGCATATCCATCCTAAAATAGAAACCCCCACCAAACC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7033:2023 1:N:0:CGATGT\' TCACTTCTTTCGGGGCTAACAAACCCAGCTTTAACGTTCATGATGGCAGCAGATTGCATGAGAGAAGCTGGGCCGCCGGCTGGGGTCCGGCCCAAAACGGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7103:2029 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAATATACAATCGTCAGATCTGGAAGGACCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7218:2035 1:N:0:CGATGT\' CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7059:2090 1:N:0:CGATGT\' GTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGATCTAAAGGATCGTTAGGCCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7032:2090 1:N:0:CGATGT\' CATCATAATCCATAGTGGTTTCATTTATGTCCTTTCCATCTTGAATCACGTCTCCATCGAAATCTGGATCCGTCACTTCTGGATCTTCGTTAGGGTCAGTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7104:2096 1:N:0:CGATGT\' GCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7036:2177 1:N:0:CGATGT\' TAAAAATTCATCATAACCAACATCCACATCAACTTTACATTTTTCGTTCGGATCCATCTCGTATAAAGCGAGATGGAGAGTAGAGAAGTGAATGAAGAAAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7008:2181 1:N:0:CGATGT\' GGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTAGAACAGAAGGGTAAAAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7208:2190 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGCGAACGGCTCAAGGCGAAGCGGAAGCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7014:2200 1:N:0:CGATGT\' CACCAAATGCGACAAATGCAAATTCTCCTCCAGGAGCCAGAAGAAGACCAGTTCTGATTGCAGATATTGTTGAAAGACCGAAAATTTTTCCAACTAAAGTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7169:2228 1:N:0:CGATGT\' TCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGCGTCCTAAAAGTAACAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7428:2050 1:N:0:CGATGT\' AGCTTGAATCACCTCGCCTTCAATCCATTTTCGCGATCCATCAGGATTAACCTGAACATGACCAAAGAATCTAACAGGGAACACAACATCATGTCTTGCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7312:2064 1:N:0:CGATGT\' CACTAATTCAAAGACTCATTTTTACAAATCATTCGATTTTAAGTGTTAAAAAAAAGCTCATCGTCTTCTTCAACCTTGACCTGATCCAAACTCGAATCGAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7407:2064 1:N:0:CGATGT\' GGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTTCGGGCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7273:2103 1:N:0:CGATGT\' AATTCACCAAGAAACTGTAGGAATCCTCAGCTACAAATTGATCATTTATGTTGGTGAAGTCAGAAGAAGTATTCGTGTAAGAGAAGCCTACTCCAATCGGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7339:2104 1:N:0:CGATGT\' TGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGTCACACC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7347:2122 1:N:0:CGATGT\' ATGCTCATCACCTCCAAGAGGAACCACCTAACCTAATCACCTCTTCTGCGCCGCTATCTTTGTTATACCCTCTTTCTGCACCGGCATCACCCTTCTGATCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7337:2140 1:N:0:CGATGT\' CCCGGATTCTGACTTAGAGGCGTTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCGCTGGCTTTTCAACCAAGCGCGATGACCAATTGTGCGAATCAAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7287:2141 1:N:0:CGATGT\' GGGGCCCGCAGGCCGACGCCTGGAGCGCGCAGGTGCCGTGGCACGCTGTAACAGCGCGCGCTGCCTACCACAATCGCGAGGACAGCACTCCCAGTGACTGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7280:2183 1:N:0:CGATGT\' TTTGGATCTAGCTCGCCTGTTTTGGAACCAATTGTAGACATTTGTCTCAGAGATTTGGCCGTGTTGGGATAACTGGGCGGTGATTTCTTTGATCTTCTGCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7447:2222 1:N:0:CGATGT\' GATCACTCCTTCACTCGAAATGAAGTCAAAACCCTATAGAACACAAATTATACCACAATCCGAGATTACATTCTCCCATTTTCCAACATACGCCAATTATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7442:2243 1:N:0:CGATGT\' CTGGACATCTCTAACAGCAGCTTGCTCCACAATGTTCCTCACAAGGAACCTCTTGATTGCCTTGTCCTTAGGGCAACATTAGGCACAATTTGAACAACGGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7666:2062 1:N:0:CGATGT\' AGTCCCTTGACCAGTCTCACCTTGTGTTCCATACGAAGGTTGGTTCCCACCAGCATAGCCAGCAGTGAACCCATAGCTTTGCTGATGATTGTACCCAGATT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7566:2075 1:N:0:CGATGT\' GCATTTTGCTGAGGTTGAGAATGGGATATAGAGGGAGATTAAGAAGAGGGTTAGGATAAAGAGGGTGGAATTTGAGGGTTGTTTTGGAGTTTGCATAGTGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7710:2082 1:N:0:CGATGT\' TTTGATTCCTTTGAACATTCTACTTTAGAGTCTTCCATTGATGACAATGTTGATGATCGTTTTACGACAGAAGAACGATTGGAAAAGGTGAGGTGGATAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7526:2198 1:N:0:CGATGT\' TGATAAAAACATATATACGAGCTAAGAGCTAACTTATCCAAAAAAAAAAAATATTCCCCCAACCGTCTCTTCAAGAACCCAATCAAAGATTTAAGATCGGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7907:2024 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAGAATCACCCAAGCAAGCGCAGACAGGAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7910:2046 1:N:0:CGATGT\' GTCCCTGTTAATCATTACTCCGATCCACTTGTTACTTCTATCTACATGCTCCGCTCCGCCCCGCCCAAATTGCACTCCACACAGCCAGAGCAGTAAGGAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7884:2079 1:N:0:CGATGT\' TCTCATTATATCTTACAATCAACTCACAACCGAGCAAAAGCCTTACCGCTCTCACTTCCCTTGCCAAGAAATGGGTAGTCAGTATATCCCACAACAGGATC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7937:2130 1:N:0:CGATGT\' CTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGATCAGCACTCGGTCCTCCGGATTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7876:2133 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAACAACAACTAGACCATAGCCACCACCATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7991:2141 1:N:0:CGATGT\' CACCACCACTGGAATGTACCATTTTGCACAATTGTCAATAAATGTTTGGATTCTCGCCTTTCGACTCTGAGCCTCTTCTACAAGACTGACCATCCTCGCCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7971:2185 1:N:0:CGATGT\' ATGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGATCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:7957:2233 1:N:0:CGATGT\' GAAAAAAGCTAAGAGCTTCCCTTTTATTATTCTGAAAATTAAGTAATCAACAATAAATAGCAATGTTTCAATCGTTATTGTACCACAACTATAATGGCATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8021:2004 1:N:0:CGATGT\' NCGAGATCTTGGGGGCAACACCGATGACAAGTGCGACGTTGGTGCTAGTTGACGCCTCTACCAAGTCTGGGTACATCTTGCACCCTCCGCAACCGGAGCCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8181:2113 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGGAAAAACATCCAAGTCTCCAAGCGCATCACTACACCTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8027:2118 1:N:0:CGATGT\' CCGGGCGTCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCTTGCGGATGTTAACGCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8133:2124 1:N:0:CGATGT\' CTCTCGGTCTATTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTAATGATAAACGGCTCGTCTCGCCGTGACCTTTGCATTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8130:2186 1:N:0:CGATGT\' GTTCCATCAACCTAGTATCATCTATATAAACCTCAGGCATCCATTGACTGCAAAACAAGTGAGCAAACTCAGCAGACTCATCACTTCCAGCACCTCCTATC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8151:2219 1:N:0:CGATGT\' CGCCAATCATTATTTTTGTGGTGTAATCAATAAGAGAACAAGATCAGGAGAAAGAAGAAGATAAAACGCAAAAGTATATAAACAATGGCGTCCAATTCTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8205:2230 1:N:0:CGATGT\' TATAAATCTAATTCTTAAGCATCAGCATATGTGCAAAGGTTCTCGAATCCCATATACTCGTGTCCTTGGATCTTGGCAACCATCTTAGAGATGCCTACTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8113:2235 1:N:0:CGATGT\' CTATATATTTCACATATGAACGGTCTCTTCCCTGAACCTGAATGTACTTGCGGTTTAACTGTTCGAGCCAATCAATTTTCACTATGACCCTGTCATCAGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8265:2028 1:N:0:CGATGT\' CAGTTTGCACGGCAACATTAATATTCACATTGTGATACTGGCGTATACAGTCATTGGTCCATGAACTGTTGCATTCCGGAACTTTCCTAAGAGCCAGAGCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8485:2037 1:N:0:CGATGT\' GCGGAGAACTAAGACTCTGTTTGGTTTTGGGGAAAACATTTTTAATTGAAAATCAATTTCAAGTGCAAATAAAAATTAAAAATTTTCCTTTGTTTGGTTCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8475:2058 1:N:0:CGATGT\' GCAGGCAATTTCTCGGATATTACCTTTATTTTTTAAAATTAGTATCTGGCACATTGGGTGATGCGAGTGCAGCCTCTGGAGTAACGATTAGCAGGAGAAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8366:2081 1:N:0:CGATGT\' TGTTGCTCTGAGAGGGATACAAGATTGTTCCTCTTGATTTGGTTTATGCCTTCAACTGCTGCTGCTACTACGAATGCCCAACAACTTCCACATCTGCCTTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8462:2162 1:N:0:CGATGT\' CTGAGGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTTCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8386:2173 1:N:0:CGATGT\' TCGAATTCACCAGAAAGATGCCTTTTCACAAATGTAGTTTTTCCTGTACCGCCATCACCGACAAGAACAAGCTTAAAACTCGGATAATTAACCGTTTGCTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8451:2184 1:N:0:CGATGT\' GCGGCGGCGACGACGACACCGTGGTCCAAAGGCGAGAAATCTACGGCAATGGCCGTATTTACGACATATCTCATCGTTATCACCCTGATTTACCTGCATTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8462:2214 1:N:0:CGATGT\' GTCCTACACATCTAAGGACAAATGGGGTGTGATGGTGTATTGTTAATAGTGCTGACAGGTTTTATTGTTGGAGTTGATCTATGTCCGTTGAGCTCGGCAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8651:2005 1:N:0:CGATGT\' NGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAGAAGCAATAGACTACCTTCAGGGAGTCATG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8713:2028 1:N:0:CGATGT\' TGAAAATGATCGAAAATTAACAAGATTTTGAATTATCTAAACAATTTAACTCAAACCTATGAAGGTAAAGATTTTCACGAGGATAAACCAAAACGATCGCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8631:2087 1:N:0:CGATGT\' GCAATTACCAACAATATCTTCAATGATATGCATGTGAAGCCATATGCTTTCAGCCTGAGTCGACACAACTCCTCCTGGTCGAAGAGCTCTAGCAATAGACT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8719:2196 1:N:0:CGATGT\' CTCCGCCTTACAGCCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGACGTCATCCCCACCTTCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8512:2242 1:N:0:CGATGT\' CTATAATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAATTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8971:2011 1:N:0:CGATGT\' CCAACGTTTCGTTTCCTCAGCCAACTTTTCTTTAGCCTTTTCCCAGAGTGTTTTAGCATCTCCTTTTTCAGGAAGAGAGTTGACATGAAGAAAGAACGGTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8897:2016 1:N:0:CGATGT\' TAGAGGGAAAAAAGAATGGCAAACTCCTCTTTAAGAGGTTCACCCATTCTCTTTTAGCAGAATCAGCATTTAACTTCCTTGAGACCATGGGCAAAGTACAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8795:2075 1:N:0:CGATGT\' CTTTAAATACGCCAAGGAACATGGAAGAGAGAGGGTGTCTGCAATACACAAAGCAAATATCATGCAGAAAACTGATGGTCTTTTTCTCAAGTGCTGCAGGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8970:2106 1:N:0:CGATGT\' GGCGAGAGTAACGAATAGGAACAACCTTAACATCATCAAGAACAGGACCACACATGGATCCTTGAACAGTCATGGTATAGAAGGAGCTGATGAATCCGATC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8775:2126 1:N:0:CGATGT\' TTTGCGTTACTCAAGCCGACATTCTCGCTTCCGCTTCGTCTACCACGGCTCGCGCCGGTACTTCTCTCTAAGGCGGAACGCCCCCCTACCCATGTTTTTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8881:2169 1:N:0:CGATGT\' CTAATTCTCTGTCACCCGTCACCACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCATCGCCAGCGCAAAGGCCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8934:2192 1:N:0:CGATGT\' CAGCCGCTAGACCCTACCTCCGGCTGACCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACATCTCCGGAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8802:2207 1:N:0:CGATGT\' ATAGAATCCCGAAGTGATGCTGGAAGTGGCACGACATCTGGTGGTACGTATCTTACAATTAGAAGGGATATCGCTACTGTCGTAAATGCCAATAGTGTACC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:8937:2238 1:N:0:CGATGT\' GTAAAAGAGAATGCCTTTATTCAAAGCATGAGCATAATCATGATCAGCCGTAGTGAATGGAATCCCACAAAGTAGCATAGTAAGAAACAAGGGTGCCATAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9059:2004 1:N:0:CGATGT\' NTAAACTTTTAATTGAACACTTGGTATGCATGTTTATCATCCTACATTAATTCAAATTAACTCCCTCAAATACTAACAAAGCTAATGTTTCACAATCATTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9148:2013 1:N:0:CGATGT\' GCTTCATATGGTACACATTTATCTGGACATCTCATTCAAAGATTTATTTGCAAAAGAAAGACTACTACTAATCAAACTACAACGACTAGACAGACTAATAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9019:2072 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAATGACAATTGACCTAGTATAAGAAAACCACGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9113:2084 1:N:0:CGATGT\' TTAAAGTATTAACTAATAGAGGAGTAATATTAGACAACCCGTCTTTTCTCTTTTTTTTTTCACAAATAGGAAATTTTGAATCCAATTCAGATATCAGAAGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9080:2092 1:N:0:CGATGT\' TGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGCTTGGGGCTGCATTCCCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9030:2107 1:N:0:CGATGT\' CGGGTCGAATGGGGGGCCCACTGGCCGACGCCTGGAGCGCGCAGGTGCCGAGGCACGCTGTGACAGCGCGCGCTGACTACCACAATCGCGAGGACAGCACT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9052:2137 1:N:0:CGATGT\' ATAAAGTATAGGCCGCCTGAGAAAACAGCAACGAAAGATTCTATAACTAAAAATATAAAATAAAAAATGACGACGTCTACTCGAGCGACGACCTTCCTAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9064:2188 1:N:0:CGATGT\' GGAAGAACTAGAAGATTCCACCTCTGGAAAGCGCCTACACCTAATGGCTTAAGCCGCTGTTCCCATTTCCTCGCTGACCCATCATGCAAAAGGTACGCCGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9174:2191 1:N:0:CGATGT\' GGCATAATACATGGATCATGGTCAAGCAAGTGGCGACCTCATCAACCGTAACACGCTCAGGCTGCAGCATAGATATCACACGGGGATCATAAGTAGGAAGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9080:2243 1:N:0:CGATGT\' CTCAGGTGGAATTTCTCTGACAACGCCGAGCATGGAGTCATATTCCTCATCTTTACGTGCGTATTTCTTCCTGAGAGCCTTCTCGAATTCAATCTCATCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9497:2005 1:N:0:CGATGT\' NCACTCATCACTAAGATAGCCAATGGTGAAGACAACAAATAACTACATAGCCGCTTTTGTTCACAATGATGAAGAAACAATAACATAGCAGTCAAGTTGAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9403:2025 1:N:0:CGATGT\' CATCGATCACTATACATTTCAAAACCATTCTCACATAACACAACGAAAAATCAGGAATGATACAAAAGAGAAAATGTGCATTATAGAGAGTTCAACGAACC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9301:2041 1:N:0:CGATGT\' CTTTTTTCTGTAACTGCACAAAAATAGCTAATACACCAACATAATTTCTCTATGTATAAACCATATGTAGAACAAGTTTAACAAGTGACCTTCCATTGCTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9358:2074 1:N:0:CGATGT\' CGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9406:2075 1:N:0:CGATGT\' CACAACTTAGCCCTTATTTTTCAGTATCTGTTGTAGAAACCCGTATCAACCTGCACATCTTCCCCGATTTTAAGCGAAGAAAAAGCTTGTGCAGCAATAAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9408:2130 1:N:0:CGATGT\' CAGTTTAGAGTGACATGACGCACCGTGCGCCCGTTGTACATTAGAATTTGCCATATAAAAAAAGAAAAAAAGGCTTGGGACACACAAAAAAGGCCAGGTAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9373:2154 1:N:0:CGATGT\' TCGACGGATCGCACGGCCTTTGCGCTGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTGACGGGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9439:2167 1:N:0:CGATGT\' GAACCGTCTTTATTAAAATACAACTCCTTGGCCATGGCATTGGTGTTTGTGGAGCGTGGTTTTCTGAAAGCCACATTTTGTCTTCTGGTGGAAGAAATGGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9454:2181 1:N:0:CGATGT\' GGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGCTTGGGGCTGCATTCCCAAACAACCCGACTCGGCGACAGCGCCTCATGGTGCGACAGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9482:2191 1:N:0:CGATGT\' CGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9269:2205 1:N:0:CGATGT\' CGCCGGCAGAAGGAGCAAGACGACCGGTGCACACCGAAAGGCGGACCGGTCGGCCCACCCCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9310:2208 1:N:0:CGATGT\' GTCCAGTTGTCATTTCAGATTTGAGTTCTCATCGAGGTCCTTACAAGTGGTGTCGGCTGCGAACACCAGCACCCTGCCTGACGCGTCCGCTGGCCTCGTTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9274:2238 1:N:0:CGATGT\' TAAGGGTAGATTGGTCATATCCCATTGAGGATTTTATTTCATTTGAGAAAAGACCGAACAAGTAGGCTGCTCCTGCTACTGACATTATCAATAGCGAGGCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9542:2010 1:N:0:CGATGT\' CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9697:2022 1:N:0:CGATGT\' TGAAGATAAATTAAAGGAAAGTCAAGCTGTTGTTCGTACTTACCTTCAGAATTTCCATCTGGAAAAAAAATGAGTCTTCTGTTTCTTTTTTCAAATTCATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9543:2051 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAGAGTAATGAAAACATCCTTGGCCAATGCTTTCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9599:2055 1:N:0:CGATGT\' GCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9539:2070 1:N:0:CGATGT\' TGGGGGAGTTACAGTTAGCTATTTTGAGTGGGTTCAGAACATCCAAGGGTTCATGTGGGATGAGGAGAGAGTGAACACAGAGCTGAAGACATATATGACTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9735:2074 1:N:0:CGATGT\' TTCCATAGATTATAGTTGAACTGTGAAGACTTGACAAAGTCATGCCGGTAGAAATAGTACTCGACTTACCGATAAATTAGGCAAAAATATCACTCCCTCAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9674:2091 1:N:0:CGATGT\' GGCACGTGCCCTTGGGGGACTAATCCCCTACTGCAGGTCGGCAATCGGGCGGCGGGCACACGCGTCACTTCTGGCCCGGATTCTGACTTAGAGGCGTTCAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9643:2096 1:N:0:CGATGT\' CCGGTCAGGGTCTTCACAAAGATCTGCATCCCACCCCTCAGACGAAGGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCGGCCAGGGTCCTTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9737:2103 1:N:0:CGATGT\' GATTTAATCTGCGAATTAATTTGTCATAATATTCATCATCCATAACTAAAATATTTACAAAAAAAATAAAAAGAAAAAGAATTATATTTATTTTGGGTAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9520:2118 1:N:0:CGATGT\' TAGGAGCAAAAGGAGACCAATTTGATACATCAACTTCAAAAGCACCAGCAATAATTACAACGAGGACAATGACTATCTTAGTTACAGTCATGAATGAATTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9583:2142 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAATAAAGAAGTGGCGAGCAGGACGGGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9715:2144 1:N:0:CGATGT\' CCGCTATTTTGCCTCTTGGCTTCGAAAGCAGCCCCGTCGTTGAGCATGTCCTGAGCATCGGCTTCCATCCCTAGTTTGGATAGTGCCAGAGCCTGCAAATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9521:2161 1:N:0:CGATGT\' ATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9881:2029 1:N:0:CGATGT\' CTACTTTTTAATATGTTCTTCACCTCCATTCAACTACAAATCTCTATAGAACTCTTATTCCATGAATCCATAAACCGTTTATGAAGATCATCACAATAAAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9898:2074 1:N:0:CGATGT\' CGGATTTGGACCGTTCCGCATCCGACCGAGGCGCATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9837:2076 1:N:0:CGATGT\' GCGGCACTTTCCCTCTCTTGTTTTCGCAAAAACGGTCCAACATAAACTTGCTTATCATTCAAAAGCATACCATTAAGTTTCTCTATAGCCTTCTGGGCAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9927:2116 1:N:0:CGATGT\' CCTGCTGCTAACCCGTATTGTGTTGCATTTGCCCTTCGAATAACTTCATCGAGGTCCCTGAATTTCAAGATAGATTGAACGGGGCCAAAGATCTCGTCCTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9811:2118 1:N:0:CGATGT\' TTTTTTTTTAAATAGAAAGGAAACAAGTGATATTATAAGTCCAAATAAGATTTAAAATACAGCATAATAATATAGAACTAGCACAAAATACAAGACTCGCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9841:2161 1:N:0:CGATGT\' GCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTAGAACAGAAGGGTAAAAGCTCGTTTGATTCTGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9932:2188 1:N:0:CGATGT\' GCAGATGTAACAGGATCAGAGAAATCTCCTCCAGGAGGGGAAACAGCACCAACAATGGTGACACTGCCATTGCGTTCAGGACCACCAAGACACTTCACTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9869:2218 1:N:0:CGATGT\' CCGACCCTTTTAACAAAACCCGGGTCAGCCCGTGAGTAGAACCCGGCATTGACAGCAGACCCACCACCGAGAACCCGAGCACGAGCATTGGCAACCCCATC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9761:2221 1:N:0:CGATGT\' TTCCCACATTCTTAAAACCCCACCACCACCACCACGGCCGCCGCCGCCGCCGCTTTCTACATATTCATCATCATCATCATCATCTTCATTATCCAACATTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:9996:2244 1:N:0:CGATGT\' CTGAGAATTAGATAATTCCCTTGGCCTCCGTAAATTCATGGACTGAGAACGTCTAAGAGATCCATTTTGGAGCCTTTCAACCATTAAGCTAGTCACAGAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10086:2003 1:N:0:CGATGT\' NCTGATGGAACACAAGGCTGTTTTAGTTGGTCTGCATTGCTTCTGAGTGATAATTGTCTAATTCAGCATCTAACTGCTCAGCTGATACCACCTTCTCGCCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10207:2005 1:N:0:CGATGT\' NTTCGCTTTCAAGCGTGAAAGTCCAAAATCACACACCTTCACAGTGTACTTTTTATCAACCAAAAGATTTGGAGACTTGAGATCGCGATGAACGATGGGTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10080:2078 1:N:0:CGATGT\' TTCACAATGTCACTAACCTTATCAACCGTGTCTGGCTTTGCAGCACAAGAGATCTGCAAGCGAAGAGGCATCCAGAGCTTTGGGGTGCTAGTCCTCAAGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10029:2185 1:N:0:CGATGT\' TTCCTCTTTTATATGCATGCCTCTCTTTGCAAATGTTCCGACATGATAATACGTTAAGTCCCAAATCGCTTGGGTTGAATTCCTTCAACAAGCATTGTCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10065:2189 1:N:0:CGATGT\' AGCATTTACGAGCGGTGATTATGGACAAAAATAAGTTACTCAGCTATATATCAAACACTATAAAATTGTTACATCTCCTACAACTTACACAAGTAAATTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10026:2209 1:N:0:CGATGT\' TCCCTTCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATGGTGTCTGAGCTCTCAACCTCAAGGGTGATGGTCTTCCCAGTCAGGGTCTTCACAAAGATC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10065:2216 1:N:0:CGATGT\' TTTCCGAAGATCTAAAGGATCGTTAGGCCACGCTTTCACGGTTCGTATTCGTACTGAAAATCAGAATCAAACGAGCTTTTACCCTTCTGTTCTACACGAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10157:2234 1:N:0:CGATGT\' GTCGCCAGCGCAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACAGGCAAAGCCCGCATCGACCTTTTATCTAATAAATGCATCCCTTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10215:2236 1:N:0:CGATGT\' CGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCATTGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10438:2004 1:N:0:CGATGT\' NGTGACACTGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAATCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10485:2005 1:N:0:CGATGT\' NAGGGTTTTGAGCTTGGTTAGTTCAACTTTGAGGGTCGAACAAGGGTCTTTGACTGGTGAGAGTGAAGCTGTTAGTAAGACTGTTAAGCCTGTTGCTGAAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10408:2017 1:N:0:CGATGT\' GCCGAAAAGAACAATGCTCCGGTATAAATTGAGCCATCCGATACTTGGTCCTTGTGCATCCTTGTTCGAAAGAACACAGTCATTGCTATGAGAGCCATTAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10388:2097 1:N:0:CGATGT\' GCATAGGCTATCATCCGATCGTAGTAGACCCCGATTCTTTTGTTGGGGTTGTGGGTTTGGAGAGTGACTTGGAAGAGTGACGTCAGCTGGGTTGTACCACT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10476:2103 1:N:0:CGATGT\' GGACTGAAAGATGGTTCGGGTGTCATATGCTCCTTGTGTAACAAACTTCCTCTCGAATTTGTCCAAGAACTCCAAGTATAACAGATCTTCGGAAGAAAGTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10423:2118 1:N:0:CGATGT\' ACTGAATCTCCTACCAATCAACCTCTTTGCATCAAAGACAGTGTTGATAGGGTTCATAGCGACTTGATTCTTGGCCGCATCGCCGATGAGACGTTCGGTGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10612:2008 1:N:0:CGATGT\' TCAGATCATCAATTACAATAGCTCGTTCTCCTGCTTCCACGGCACCAACATGCATCTCCATTTTATCGGTTCCATATTCCAATGTTTACTCTTCCGAAATT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10664:2055 1:N:0:CGATGT\' CTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10721:2059 1:N:0:CGATGT\' CCCGAGGCCCCCGCCGACATCTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGATGCTCGCGCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10594:2091 1:N:0:CGATGT\' CTTCCGTGGCCTAGAAGGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10726:2093 1:N:0:CGATGT\' AGGCCATTGACTCTCATGTTTAGCAATACAGAATCAAGCATCTTCCCCCCGACGTTCTCGAAATAAATGTCAATCCCATCTGGAAAGTACCTCCTCAAGGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10635:2169 1:N:0:CGATGT\' CTTGAAGAGAAGCAGAATGTAAAAACTCAAGGTACTTCAATCTCTGCTCCTCATTGCTTTCCACCAATTGATCTTCAACTCTGGAGTTAATTTCCGCCATC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10631:2229 1:N:0:CGATGT\' CCAGCCAAGCTGTACCTGCTGCATGTTCAGTCGTCACAATGGCTATCATGGGACTTACTATCGCCTCCTTCTGGGGCACTGGTCGTCGCATCAGAGATCTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10742:2236 1:N:0:CGATGT\' TCCCCATGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCATTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10719:2244 1:N:0:CGATGT\' CGCCGCTAGGAGGCATACACAGATTGACATTCCGCCGAGATACCATGGCACCTTGGATAGCAAGCCGTTGACAAGATGTTGAATGGAGCTAATGGGTGATG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10958:2023 1:N:0:CGATGT\' GCATAATACAATTGACAGCATCATCACCACTGAACTCCTCAGACCATGCAACAAGGCTAGGCATCATGTCCTGATCAAGCAACCGCCAATTCTTGAGCTTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10876:2040 1:N:0:CGATGT\' CCATCCTCACAAACCACATTATCATTACCTCCATCTGATCCAAACATCGCAATTGGACTACCATCCAACTTCTTAGGCATAATCATCTCAAAACGATTCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10945:2062 1:N:0:CGATGT\' CCCGACCCCATGGTTAACTACTTGGAAGAACCCCCACTCTTTGCAGGCCTTAGCAATCTGGTCCATGGTTGACCTGACCATGTTCAGGTTGCTAGAGGACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10889:2112 1:N:0:CGATGT\' CATGCTTCAACGATATCGACGAGACAAACGAATGACCAGGACGAGAACTACCGGAATCAATACCGGCCGCATTTTTCAAGTACCAGGCAACAGAAGGGGGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10841:2112 1:N:0:CGATGT\' CCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGTATGCTCTCACTCGAACCCTTCACTGAAGATCAAGGTCGGTCGGCGGTGCACCCACAGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10822:2116 1:N:0:CGATGT\' ATGATTTTGTCTCAAGCGTACGAACTATCTCACCATTTCTTATGTCCCATAACCTCACTCCGCCGATGTCACTACAAGAACTCAATATAGTTTGATCACTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10958:2116 1:N:0:CGATGT\' GTTCGATTCCATTGATACAAAACTCTCTACCAACCGCACCCGATCTTGCCACACTTTCCGAACCATTTCGAGGTACTTTTCGTTATTCTCCATGTCGCCGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10782:2120 1:N:0:CGATGT\' CGCCAACTTGCGTTTACTGCAACGAAGAATTTGTCGAGTTTTGGAGCGTTGTTGAGCATCAAAGTTGTAGCTACAAAATCAATGAAATAGCAGCATGCATT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10879:2146 1:N:0:CGATGT\' GGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACTCGAAGAGCCCGGTATTGTTAGATC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10759:2146 1:N:0:CGATGT\' CTGTTTGGTCCTCCGGGAACTGGAAAAACTCTTCTTGCTAAAGCACTTGCGACTGAAGCTGGAGCGAATTTCATCAACATAACCGGTTCCACGCTGACATC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10756:2207 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAACCACTACGTGAAAGCGTGCCCATCCTTGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:10769:2236 1:N:0:CGATAT\' CGCAATTCTCACCTCCGTCCTCGTTGCCGGAAACTCTCCGATTCTTCCACTTCCGGCCCCACTCCGATGACTCCCAATGGCTCAAGAGAAAAAGATTTCGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11156:2085 1:N:0:CGATGT\' CTTCTGTTTAGGAACTGACGTGGGCCATCGTTGACCCAAAACCCAGACCATGCTTTTATGTAATTCAGTTGCAGATCTTTGGTTGTGAGGTTCAAGATTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11128:2137 1:N:0:CGATGT\' CTGGTGAAGGGTTCGCTTATGTTGGACAACTCGAGTTCTTCATCAGAGAAGCACCTGAGAAGATGAAATCAATGAGCACAGGATTTTTCCTAAGCACATTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11032:2199 1:N:0:CGATGT\' AGCGGTTTGAATAGTCATATGAAGAGATCCAGTAATCTTAGCCCCTTTGAAAGGTTGAGAGGGTCCGAACTCAGTTCGGCACGCCATTAAACCGGGCATTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11106:2222 1:N:0:CGATGT\' GCAGAAACACATGATCCCATACCTAGATATAACAACACCCTCTTCATAATGCTTCTTTAACTTGGAGATGTTAATAATTAGCTTTAGATATTATTTTTTTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11405:2026 1:N:0:CGATGT\' GAAGTTTCCTCGATACTTCATTGCTAGATTCATTAACATGGGTTAAATAGTTCTCAAGAGCAACAAGCAAGCTTTCACAATATTGCTTGATCTCACTCCTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11478:2036 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAACAACAAAGTAGTCCCTATGTAATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11337:2049 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAATCTCATATAAAGACACACAGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11374:2059 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTACCTCGCATGCCGTCTTCTCCTTGTGAAAAAATCCTTCACTTCATCTTCAAGCAGAAACCTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11403:2076 1:N:0:CGATGT\' CCATGTCAGTCCGCACCCCGAGCCGATCGGCGGACCGGATTTAGGCCGTTCCGCATCCGACCGAGGCACATCGCCGGCCCCCATTCGCTTCCCTCCCGACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11319:2143 1:N:0:CGATGT\' CTGCCGCCTCCTTTGGGAGCTTCTTCCCGGCTTTTGGCTTCTTCTCCGCCGGTGCTTTCTCGGCGGCGGCGGCGGCTTTCTCGGCGGGGTTCTTTTTTTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11722:2004 1:N:0:CGATGT\' NCAGCATTCACATCTTTAGGGACAACATCACCACGGTACATCAGACAGCAAGCCATGTACTTGCCATGGCGAGGATCACACTTGGCCATCATAGAGGATGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11614:2037 1:N:0:CGATGT\' ACTTCTGAAGACAAGACTACTACTCCACTAGACACGGCATTTGGCTTATCAAAGAATCCCAGTCCTGTGTGCGACTCCTCATCTTCATCCATGACACCAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11701:2043 1:N:0:CGATGT\' CCGGGCGTCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCTTGCGGATGTTAACGCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11509:2065 1:N:0:CGATGT\' GCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGGTCATCCCCCCTCCCCCGGGCTCCTTTCCAAAAAAGGCCCCCGCCGCCCCCCCCGTTCCTGGGGACTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11628:2075 1:N:0:CGATGT\' CGTCACAAATCCTCCAAACAAACACAACCACTTTGAAACTTAACCAACCAACAAACCACGAATCAACTTCACCAACACAATCTCAATTACAACTCTATCAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11616:2101 1:N:0:CGATGT\' CTCGGGAATATTCCGCCATAGTTAAGGCAGTCAACCCAACTCTCATACGTGCCCCCGGCGGTTCATTCATTTGACCATAGACTAGAGCTACTTTTGATTCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11743:2106 1:N:0:CGATGT\' CCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCAATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGATCGACTAACCCATGTGCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11520:2106 1:N:0:CGATGT\' AGGAGAGAGAAACACTTTCGATTAATTAAAAATCAAATCAATTAATTAAAACCAGAACTCAAATCCCATTCTTTTTAATTTAATTTAATTTAATTAAATGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11603:2193 1:N:0:CGATGT\' TCTTAGCTTTAACCTTCAAATGCTTTTCCAATATACTCACAAGTGACGGCACCGTTACAGGTTGCGTATTACCCAAGTTATATATCCTATACGGTGCGGGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11509:2212 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAATACTATGCTACAATGTTTGCCGGCAGAGAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11942:2140 1:N:0:CGATGT\' CTCAAATCAACACCATGATTAGGAGAACGCGTTCAGACCGATTTGAATGATAAGATTTTCATGGTTACAACCGAATCAGGGTTATTAAAATGGCCATAACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11958:2165 1:N:0:CGATGT\' CCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11924:2172 1:N:0:CGATGT\' TTGGCAATAGCTTTGAGTGACTCAAAGAAGTAGGTAGATTCCCGAATGATTGCATACCCATTGGGACGTAGGATTCGATCCATTTCCAACAGAACATACTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11836:2197 1:N:0:CGATGT\' GTGTTGTTTGGGTGGGATGGGGAAAAAAAATGATGGGTGAATTTTTTTTTAGGGAAGATATGGAGACGAGGAAAACAAGGGCGGCGATGGAACCGGGGAGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11909:2198 1:N:0:CGATGT\' GGGCACTTCATCTTTTGCTCTAAACATCAAACCAACCCAACACCTTCACCTTCCTCCACCTATTTTTTATTTTTCCATTAAAATCCCAGTTTTTTCATCTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11913:2230 1:N:0:CGATGT\' CGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGTTAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11830:2231 1:N:0:CGATGT\' CCAAGAAGTCACACATGCTCCAAACAGATATATCTCAGCTTCACTACCATGAGGCGAAGTGAGGACAACCTTAGGAAGATCTCCAAGTCCTTCAGTCAACT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:11967:2238 1:N:0:CGATGT\' CTCCGTACCAGTTCTGAGTCGACTGTTCGACGCCCGGGGAAGGCCCCAAAAGGAGCCGTTCCCAGTCCGTCCCCCGGCCGGCACGCAGCAACCCGCCCTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12221:2045 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCCTATGCCGTCTTCTGCTTGGAAAAAATATTAAACTAGTCAAATAGGACTCTCCCCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12071:2064 1:N:0:CGATGT\' GGCATAGTCCAATGAGTAGACAAAAAACAATGAAGAAGCACCAGCAGCACCACCAGAAGCCAAGTTACCAGCGAACCACACCCAGTAACCATCCTTGTCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12090:2189 1:N:0:CGATGT\' CTGATTAAGTAAGAAAAAATAACGGATATTTTTTCCAATATAAAAACAAAACTTATTAATAAAAATTATGGAAGTCGGGCGAACAAGAATGTCCATCTCGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12221:2196 1:N:0:CGATGT\' CGTCACCCTCCCGGAAGATGACGTCACCATCGTTTTCGCGATTGTGGCAGCTTGCTCCGCCTTCAACCGAGCATCGCGGAAGCATTTGGAGCAAAGATTCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12186:2247 1:N:0:CGATGT\' GTGCGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACCATTGTGACACTGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12449:2002 1:N:0:CGATGT\' NGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAACCCGGCCAATTAAGGCCAGGAGGCCATCGCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12350:2078 1:N:0:CGATGT\' TGGGGGGGTGAGTAACGCGAACAATGGACGGAAGTTGACGGTACTCCCAGCATCGTACACGTTGAATGAACCTCATGACGTCAGATTGCTTCTTCCTCCAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12288:2099 1:N:0:CGATGT\' CTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAACTAAGGCCAGGAGCGTATCGCCGGCAGAAGGAGCAAGACGACCGGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12320:2102 1:N:0:CGATGT\' CCACGAGATAGTTCGAGTATCATATCCACAAATCCTCCACCACCTGCTTCTCTAAAAATCAATTACTTCAACTCACAGAAAAGAAATTAAGGAATCCAAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12496:2126 1:N:0:CGATGT\' CTCGATTATCTCAAAATCAGACCTGTAGAACGTTCTCAGGTTCCCCCCCGCGAGTAACACCGTCAGGTATGCCTCGAATGCCGCTTTCATCGCTTCTTTGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12319:2130 1:N:0:CGATGT\' CGATCAAATTTCACAGCTATCCCTCGCATCACAACATGCTTCACCCTCCGTAGTGTTTAACAATTAAATCACCTGATGAAAATCAAGCACCTGTTTGTTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12439:2208 1:N:0:CGATGT\' CGCCGAGCTATTCTTTTCAGGTTCTTTTATTTCGCCTGTAAGGTATTCATCCTTCCCTCGCCCACATATGGACATCATGACTGATTATGACCACCGAAGAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12543:2072 1:N:0:CGATGT\' CATCATTCAACAAATAAAGTGATTCTGAGTAGAAAATTAAATTCTTTTTAAAAGGACAGATATACAAAGCATCACTCACCTACATCTTTTCCTTTTCATTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12656:2084 1:N:0:CGATGT\' TTCTGTTCTACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12576:2091 1:N:0:CGATGT\' ATCCGCTTCCATCCCTAGTTTGGAAAGTGCCAGAGCCTGCAAATAAAAGGCGATCGGCCATTCGGGTATGCAGGCACAGGGCTGCATACCCGAATGGCCCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12504:2100 1:N:0:CGATGT\' TCCGGTTTTTTGTTCTTTTGACCCTCGTTTGGTTTTTATCGTGCATTCAAGGCTATGGTTTTGTAGTGCTGTGGATTTTTATCCACAAGTAATATCTTGGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12587:2185 1:N:0:CGATGT\' AACCAGCCAAATTTGGTGCCAAGTTCTATAGAAGCTTGCTATATGTTCTCTCTAGTTTTTCAAATTATTCAAAACCACCGACACATTCAATGGATGAACCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12502:2233 1:N:0:CGATGT\' TGTGAAACCGGCGCTAAACCATTAGATACTTCTGTAGGGAATGTCTTCATAAATCCGGCTTCTATATCGCAGAAATCTACTTGAGCGATCGATGGAATTTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12696:2247 1:N:0:CGATGT\' TGACTCTGCTGGTGGATAATCCTCTGCCAAAGGCTTTTTGACAGAAAAGTCTCTACCCTGTCTGTCCTGATTAAGAGGAACATCCCTCATGTCATTGGAAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12855:2049 1:N:0:CGATGT\' GGGGGCATCTCACCGGCAACCCACGGTGTCGAACCCATCAAGCGACGGCGGCCGGGGGCCACATTACCTGAAGAACCAGCACCACCACCACCAGCGGCGGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12826:2071 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAATCCTGTTGAGCAGTTGATCCCAAGATGCCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12846:2088 1:N:0:CGATGT\' CGTCGCGATAATTGTGCTAGTAGCTTCTCGAAATCATCCTTGTATCATTACATGCGATGGTTCCTGGTATCTCCGCTGTAGAGCCAGTCATAAACAGTGGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12947:2106 1:N:0:CGATGT\' CGCCTCTCTCTGTTCTGCATTTGAGTAGAAGAAACCTGCATTTATTTCACTTTTCTCATACTCAAGAGACACATTGCAAGTCAATATGTAACAATTTTCTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12806:2200 1:N:0:CGATGT\' CCTTCCTTGACACGGAAAGCAGGTGAGACGTGGGCAGGGATGTTAGAGTGCCTCTTCTCATATCTTTGATACTTTTTAATGTAGTGCAGATAGTTGCGGCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12805:2220 1:N:0:CGATGT\' CATACATTACTTATGCTGAAGAATCTACAATAAAGGGTTGTTGATATAGTAATTATCTATGATAAGAACAAAGGCGCATAACGCGCAATCACAAAACATAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:12975:2239 1:N:0:CGATGT\' TTACCCTGTTAAGTGTAACCAAGATAAGTCCACCCAAATTTAACAATATCATCAACAATCAACTTATCTTGGTTACACTTAACAGGGTAAACACCCTGGTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13150:2015 1:N:0:CGATGT\' CACCCGCATGTATCATCCACACCGATACTTATTCCCATTTTTTAACCAAACAAGGCCTTAGTCACCTCCAAGAACAATAAGTACGTGATCCATTGTGGTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13177:2059 1:N:0:CGATGT\' AGGAAGTTCAAGAGACTCTGCCACCTTCTCGAGTGCCAAACATCTAATTTCCCCAAGCTCCTGTCTACATGTGGGGCATCTGTTATGAACCCTTGTTTTAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13105:2163 1:N:0:CGATGT\' GCCGGCTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGATCAGCACTCGGTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13085:2227 1:N:0:CGATGT\' CGGCTGGTGTGGACTCTAAGGCTGGGCTTATTCATCGTACCAAGTGTTCTATTGGCTTTACTTATTCGTTTTACAAGTTTACTTCCTCGACCTAAGTTATT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13313:2014 1:N:0:CGATGT\' GGCGAAGGCACTGACGTCAAGGCCGGGGATGTTGAGCGTCATGAGGATGCTCTTAACACCCGTGATAATGTTGAGTGCATTGCTAGTTAATTCCCTTGAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13325:2028 1:N:0:CGATGT\' CCCGATTCCCTTTCGATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13304:2034 1:N:0:CGATGT\' CAAGTAAGACTCTCCTTTTTACCTACAACCTCGAAGAGGGTATCCTCCACGGTATAGTGGAAATTGGGTACATCCAAACGGGGCAGATCCTCTGTAAAGGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13467:2042 1:N:0:CGATGT\' CCCAGCTTTTGGCAAATTTTGAAGCTCAAGTCTCTGTCAACCATCTTACTGCTCCTCGGACCGCCACTGTTCGAAGTTATAGCTGGACCATCTAACAAAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13267:2114 1:N:0:CGATGT\' TGATGGTCTTTCCAGTTAGAGTCTTAACGAAGATTTGCATTCCTCCCCTAAGACGGAGCACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCAGCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13385:2137 1:N:0:CGATGT\' GTTAGTGTCATCTTTACCCATGAGCTTTTGATACCCAAGAGCTGAGGAATTATACAGAGGCATGCTTCGCATTGTACCATCCAAAACTGTGACACCAATAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13260:2140 1:N:0:CGATGT\' CTCATCTTGAATAGCTAGTAATCAGAGAAATGAAAGTGAGAGAGAAACCGAACCAGGGAAGTGGGAGAGGAATAGAACCTCATCTTGAATAGCTAGTAATC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13418:2147 1:N:0:CGATGT\' CTTGTCAATGCTGGTTGCCAGCTCTTTCTTCGCCTTCTCCAGCCCAGCCCTCTCAAATTCATTTAACGGGCCAAGCGGGAAAATCTCTTCAGCTCCACTAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13457:2228 1:N:0:CGATGT\' ACCAAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACCATTGTGACACTGTCATCAGTAGGGTAAAACTAACCTGTCTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13437:2233 1:N:0:CGATGT\' GCCCAGGGTGGGGAAGAAATTCCAGATACAGTTCCCTTGGAAGATGACGAGTCCTTAGGGGGACTTCCAGGAGTATTGCCTGTGGGGCGAGGCATGTCAAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13285:2243 1:N:0:CGATGT\' ATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCGAATGGGGGCCGGCGATGGGCCTCGGTCGGATGCGGAACGGCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13331:2247 1:N:0:CGATGT\' CGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCAAGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13728:2069 1:N:0:CGATGT\' CTCCGGGTTATTCTTATACCCATTTGTCACATTCGGGCCACGAATACAAACCTCCCCTTTCAACCCAGGCCCAAGAACAGTCCCATTCTCATCAAAGATGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13531:2075 1:N:0:CGATGT\' CGGTAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGTTAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13581:2091 1:N:0:CGATGT\' CCGGTTCGCTCGCCGTTACTAGGGGAATCCTTGTAAGTTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13556:2115 1:N:0:CGATGT\' GCGGATTCTATAGCGTAGAAGATTCTAGAAGCTAAATCAGAAGATCTCTGCCATGCAGCGAGTCGCGGTAGGAGGCTGGATTCGCTACTATGGCTGACCAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13578:2117 1:N:0:CGATGT\' TCCCCTCGGCAAGGTGCCCCAGCTTTGATGAGACCAGTAGCAAGACCCACCGAGAAATCCGCAATGAAAGTGTCCTCAGTTTCACCACTCCGATGTGATAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13622:2141 1:N:0:CGATGT\' ACCGAAGCGACAAAGGGCTGAATCTCAGTGGATCGTGGCAGCAAGGCCACTCTGCCACTTACAATACCCCGTCGCATATTTAAGTCGTCTGCAAAGGATTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13685:2151 1:N:0:CGATGT\' AGCTTGTGGTAGATGTTTCTAGGCCTAGGACGCTCCCTTCAGGGCAGTGGGCTCCTCTCTGACCTAAGGCAGGAACAGAAATGCCATCGAAGAGCAACTAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13542:2163 1:N:0:CGATGT\' GCCAATCTTCCATTTTTTATCTCCTTCACTTTGAGCTCAGCAAAGGCTTCTGGGTCGTCGGCTAGGCCCAATGGGTCGAAGCTACCACCCGGGTAAAGCGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13715:2166 1:N:0:CGATGT\' AGCCCATGCTCGCGGATACCGAAACCCAATGCAAGTGCAGCACAAACAAGAAGTATGATCAATATTGGGTCTTGAAAAGCATTCCATACAAAGTACAGGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13644:2172 1:N:0:CGATGT\' CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGATCTAAAGGATCGTTAGGCCACGCTTTCACGGTTCGTATTCGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13532:2197 1:N:0:CGATGT\' CTGTAACATAGACCCATCTTTAGTGAATCGGACTCTCTCAACTTTACCCTTCTTAACAGCGCTCAAAAACTCACTATATCTCCATTGGGAACCTTCTGGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13503:2199 1:N:0:CGATGT\' CCTTGACAAGCAGCAACATGTAACGGCGTTCGAGAATCGACATCGACGAAATTCACATTCGCTCCTAAATCAACCAGCTCTTTAATCCCTTCCAAATCGCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13579:2207 1:N:0:CGATGT\' AGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGTTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13604:2219 1:N:0:CGATGT\' CACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGATCGACTAACCCATG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13675:2228 1:N:0:CGATGT\' CCTTGGTTTAATGTCCGCGCACCTTTGAGCAGTCCAAGGAAGGGACGAGATCGATGCCTAAGTCGACACCACACTTGCTGGCGAGGGGACCGGCGTAGGCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13614:2248 1:N:0:CGATGT\' TGTACTTCCTCGGATAGCAGATAGTGCAAAGAATGACAAAAGTGCGGTGTTGCGTGCTAGATGCTGTGAATATGCACACTTAATTTTGGAGCAGTGGCCTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13871:2050 1:N:0:CGATGT\' GCCGTCGCAGCATCAACCCCCCACCGGGATCCCGCTCCGTGCCATCCCCTTCAACGTGGTGGATCACGGGAACGGGAAGCCGGATGTCGGTGATAGGAGTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13996:2163 1:N:0:CGATGT\' GTGGTATTTCACTTGCGCCGAAGCTCCCACTTATGCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13949:2201 1:N:0:CGACGT\' CCCAAGTGAAGTCTCTGATTGATTGCTCTACATGTCAGAGGCACACAAAGTTGAAGACATTAAATTAAAATACAGAGATAAGGATTTCTCCTCTTTCCTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:13903:2210 1:N:0:CGATGT\' GTTGAAGGCCCTGTGGTGAAATTAGGCTCGAAATGTTTTTCTCGGTCTACCCATAAGGGTGCCATTATGAAGCACCAAAGGTTCTCAGGAGCAGGAGAGGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14157:2018 1:N:0:CGATGT\' TCCTAACCAAACTCAACGCCACATTTTTCATAGCCATCAATGCAATTTCTTTCCCCAAACACGCCCTTATACCGGCTTGGAAAACCGGATATCTATACCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14079:2034 1:N:0:CGATGT\' CGCCACCACCAGTACCTATTTTTAAGAAACCTTGCCCTCCAATTATCAAGAAACCACCAATCCCAGTTTACGAACCAAAGCCTCTCCCTCCTTTGCCAAAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14220:2084 1:N:0:CGATGT\' TCGCCATACATCAATAACATTATCAAATCCCCATAAATTTGAACACCACTTGAGCTGCGGGCTGCACACTTTCCTGCAGTCAGATCGGAAGAGCACACGTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14161:2103 1:N:0:CGATGT\' AGGTTCCAAAAACATCTGACTCAACAAATCCGACGGCTCAGATGCAATCACAGATCTATTAGCTTGAGCCTCTAAACTCCCAACCATGATGATCAACAACT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14225:2170 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAACAACACACACTTCGACAACCGCCACCCCTGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14165:2207 1:N:0:CGATGT\' ATAAATTCCCAAACAAATTTGATGGATTTTATATCAAAGTTGCTTTTGTTGGCTATATGCATAGGTACCCGATATGGCTGCTTCAGTTCCAATAATTTGAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14187:2212 1:N:0:CGATGT\' CGCTTTGCCAACAAGCTCTTGCCACTTGCAACAGCAGTGGGATTAGAAAATGAATCTGCATCACTATGTAGTCTAACACCACAGGATGCTGAAGCTCTCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14143:2222 1:N:0:CGATGT\' GCCACATTATTTTTTGGAAAGTTCTTCTCTGACCATTAAAGTAGTATGCATTTCACAAAAATAAATTTGGAAAGAGGAAAAAAAAAAAAAAAAAAAACACT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14058:2230 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAACGGAGAGCAAGTTGGCGAGGTGATTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14220:2244 1:N:0:CGATGT\' AAGCATACACATAGAGCATGCAAGGGCCGGTCAAGCCGGTTTTAGATAACTTTTCTATATAACAGGGAGAAGCACCACAGTAAGGCTAGCATTATCACCAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14287:2012 1:N:0:CGATGT\' AATAGATGCATAATTTCAAAGCTGATATACCCTGAAAATAACTGGTTTCAATTTGCTAATCAGAACATACAATAAGTTCTACTGTTGATTAACATCTCTAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14488:2032 1:N:0:CGATGT\' AGATCATCATAATTCAACATATTTACTAAATGCTCATAACTTAGTAAACATTTTGACAAACACACAATGACTTGTTCAAGTATGGAAGACAGCCATTTGAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14324:2044 1:N:0:CGATGT\' CTCGGATTCTACTTCCTCTCTAGGACAACTAAGATCCACATCTGACGGACCAGCCATAGCCGTACTAGACGACCTAAGATCAAGCTTCAAAGCCTCTGCAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14294:2151 1:N:0:CGATGT\' CGGTGGTCGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGTAAAAAAAAGAACCATTGACGCTTTGAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14379:2159 1:N:0:CGATGT\' GGCAGAAATTTGAATGATGCGTCGCCAGCGCAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACAGGCAAAGCCCGCATCGACCTTTTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14362:2206 1:N:0:CGATGT\' GGCTTTTCTAACACTCCTCCTCCCGCTGATCCAGTTGCTGACACAGCCATTAGAAAGCCACGTTGGTTCCACAATCCTTTACAAAGAACATGTTTATCCCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14342:2223 1:N:0:CGATGT\' CACCGATGCCTTTAGCTTTTCCTCCAAAGCCTTGGCAGCCGTTACATCTGAAAAGCCCACAAAGTTATCCTCCTCCCCAAAATGAGCTTGAACAGGAGCTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14717:2007 1:N:0:CGATGT\' CATGGCAAAACCGCGACATTGCTGGAATCACAGCCTGTCATGACTGACTGCATTGCGGATGTGTCCACAGGAGCATAGACAACCATGGACTCGTAGTAGTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14517:2074 1:N:0:CGATGT\' CCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGCTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14731:2074 1:N:0:CGATGT\' CTCAATCTTCACTAAGTTATGCTTCTTTTTCCCCACCTGCTCACAAAGTCCCTCCTTAAGTTCAGCAATATCTTGATCGATCAATTCTCCTCCTTCAGCCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14538:2151 1:N:0:CGATGT\' ATTCCTCATAACACCAATATCATAAACTGGGGTGAAATCAGGGTTAAACAACCCAAAATTCTTCTCAGCAATAGGTCCAGGCTTCTGATTCTCAACAAACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14713:2165 1:N:0:CGATGT\' GCAAAGCAAAGCAACACCAAAGTAACTACACATTGATCAAATGCACAAATTTTACAAAATTATTCGTAGCCTTCTGGCTTGTAGGCGATGAAACTGATGCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14988:2172 1:N:0:CGATGT\' GGGGGGCCCACTGGCCGACGCCTGGAGCGCGCAGGTGCCGAGGCACGCTGTGACAGCGCGCGCTGACTACCACAATCGCGAGGACAGCACTCCCGGAGACT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14947:2188 1:N:0:CGATGT\' TTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACTACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14924:2194 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAACACCTACCTATACCAGAACATCGATATCCTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:14879:2224 1:N:0:CGATGT\' AGGGACGTAGTCAACGCGAGCTAATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15004:2005 1:N:0:CGATGT\' NTCGAGCAGTCCACCGACAGCCGACGGGTTCGGGAATGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAAGTTACGGATCCATTTTGCCGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15080:2021 1:N:0:CGATGT\' GGATAAACTCCTCATCTTGAGGGCGTTCAAACACCACGGTGCTACTTAGCTCATTAAGCATGGCGCTAATCCCATTCTCCCTGAGCCGGTCTTTAAGGTAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15078:2061 1:N:0:CGATGT\' CGCCATCAAGAAGAATTTCTGGTTCGACGATGGGCACGAGACCATTGTCCTGTGAAATTGCAGCGTAACGAGCAAGTCCCCATGCAGCTTCCTTGACAGCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15124:2095 1:N:0:CGATGT\' GAGAAGCTCAGAAATAATGAGGTTATTATATTAATAATTAATCAGTATGAGAGAGAAGCTCAGAAATAATGAGGTTATTCCACCCCATCAATGGGATTAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15058:2138 1:N:0:CGATGT\' AGCACCAATGTCCTCAGGGCGCTTGGTCAAGTGACCGTGAACACCTTGAGCAATGTCAGGACTTTGCTGCTCAATGTAGACCAAGACCTTGCAGTTATCAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15051:2178 1:N:0:CGATGT\' TTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15018:2191 1:N:0:CGATGT\' GGGGCTTTGAGGATACGTGAGGTAAGGATGACGTCAGCGGACGGGATTTGAAAGGTCTTCACTGTACAGTAGGCCATTTGTGTGTTTATTTCTACTCACTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15071:2197 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAACTTCTGGTACAACAGCACCCGACCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15119:2245 1:N:0:CGATGT\' TAAAATTGGAGCAAAACTGAGAAATGAAAGAAATGGAGAGCAAGGGAATAGATGATTAATTTTATCAATTAATGAACAGGTGGTAATTGAGAGATAAGGAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15494:2018 1:N:0:CGATGT\' GCAGGATTGGGGTCGAGCATGCGAGTGACAAGAGAGCACGCTTCAGGGGAGAACCAAGCGGGGCAGCTGAAATCACCCTTATAGATACGACGATACATTCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15308:2054 1:N:0:CGATGT\' CGACCTGTTATTGCCTCAAACTTCCGTGGCCTAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15437:2087 1:N:0:CGATGT\' CCTGTTATTGCCTCAAACTTCCGTGGCCTAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGAGTCCGCATAGCTAGTTAGCAGGCTGAGGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15353:2100 1:N:0:CGATGT\' GCCCACTTCTTGAGCATAAACCAAACAAATAAATTAAAAAATCCAGAAAAACTTTCATTCACTCGAGATAGGATTTTCATTCGGAAATCACTTTTAATTAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15259:2220 1:N:0:CGATGT\' CTCAGAAAGAAAACTTCAAAGACTGTTTTAATTTCAGGACTCAAAACTAAAGATTCAGATTATCCTGCCCTGTCATCCATCTTATCATGTTCGATCATCAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15732:2003 1:N:0:CGATGT\' NATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAATGAGGAATTCACCTGCGCCGCAGGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15541:2026 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAACCAAAAATAGTAACCTGTGGGTAGGGGCAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15671:2108 1:N:0:CGATGT\' CTTGGGGGACTAATCCCCTACTGCAGGTCGGCAATCGGGCGGCGGGCACACGCGTCACTTCTGGCCCGGATTCTGACTTAGAGGCGTTCAGTCATAATCCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15607:2111 1:N:0:CGATGT\' CACAATCACAAGCACCCATACACTCCTCCATTTTTGTAACAAAGCCTTTGACCTGGACAGGAATTTTCCATTCGATCGAGCGCAACTTCTGTGCAAGCTTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15572:2115 1:N:0:CGATGT\' GTCGGGGAGCTGAAACGTTATGCTATTCATTTTGACAGGACTGGTCAACCAAGTGGATCCGCTGAAGTAGTGTATGTTAAGAGAAGTGATGCATTTGCAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15647:2138 1:N:0:CGATGT\' ATGCATGCAAATTTATCAACTAAATAACAAGTTTGAAATATAATAGATTATATTGTAACAATATTTATGAATTGTCAAATAATTTCATAGGGTTATATGAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15546:2184 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAACAAAAAAATTGAGTCGCCCACAGCGCACGGGTCAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15833:2017 1:N:0:CGATGT\' AGCAGAGCAGATGTTTCAGCAACAGCCCCCTCAACAACTCTAACCGCAGAATTGTCCAAATATTGTGCTAAATATTTAGCCATCAATGATGATGTAGCAGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15784:2055 1:N:0:CGATGT\' AGGGCCGAGTGTTCCACCAGTGTGAACCAAACCATTCTTCCAAAACACCCAAATGATGCGACTGTTCATGCTCGTTTCCTGAGAGGACATCCCCTAGTATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15752:2130 1:N:0:CGATGT\' CGTCGATATCTTTTTCCTCATCTTCTTCCACAATAATCTGTTCAACCACCTTGGATATTAGGTCTCGATCAACCTTCCCAGATGTTGTCACTTTCAGAACC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15887:2145 1:N:0:CGATGT\' CGAAATATTAATTATAACACAAAAAAGAAGGTTACATTTGAACAGATGAACTGAGAGAGACTAACACACAACACTCTTTCACTTCTAGAGTTCCTTGGTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15910:2186 1:N:0:CGATGT\' GGATGGTCCTAGTTGTTGGTTAGGTTGAGGTGCAGCAGCTTCGAGCAGGGCTCGGGTCCCACGAGCTGCTGGCCTAGGGGGGATGTGGGTCCCACAAGAGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15847:2230 1:N:0:CGATGT\' TCCACGTCGCTCACCTCAATCTTCTCACATGGTGCTAAGCTGCTACAAGCCAATGTCACTACTTCCACACTGCTCGATGTTCCTCTAACGTTCTTTATTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:15932:2230 1:N:0:CGATGT\' CCGCAGAGTCAAACAAAAAATAATACCAATTACGTCTCAGGTGTATACGGGGAGTACTAATATGGTTCCAATTATTCCTAGCAAAGCCTAAGATCTTAGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16089:2097 1:N:0:CGATGT\' ATTCTACAACATCACTGAAAACCATATCGACATTCTCATCAGGCTCACCAACCATCTGGTGCCACATACCAGGGTAGATCTTGAGAGTCTTATCCTTGCTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16178:2104 1:N:0:CGATGT\' CAATAAGCATCTTCCAATGGCATCCTCCAAAGTTTTTCCCCCATCACTTCTGATGCACTAAACACCTCACTGGAAAGTGCATCATTGGGTGTAAACACACC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16042:2196 1:N:0:CGATGT\' CTGATGAGTATGAGGATTTACTAGGAGATTTTGAGGTTTGATGTCACGATGACAAACACCAATACAGCGATGAATGTACGACAAAGCTCTGAAAATCTGAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16029:2231 1:N:0:CGATGT\' GTGGATGAATCGGACTTCTTTGTGGCTGGCCAATCTTCATCCCATTTCGTGCTGCTCTTAGCAGCAGAGACTGAAACTGTTCCATTCATATCCTTTGATGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16357:2009 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAACATCCATGCTACTCATCTTCCTTAATAGAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16336:2095 1:N:0:CGATGT\' TTGTGTAAGACCGTCTTACTATGCAATGGTTTATAAAACAATTTTGGAAAGGAGTACTTTTGAAAATAAAGGTATTTGTGAGTCATTACACAGCGAGATTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16253:2098 1:N:0:CGATGT\' TCCGGGACCAGTAATTGAGTTCCCTGTTTTTCATATCTGTGTGCTATGTATGTTGTGATTGCTCTTGATTCAAAGAGCTTAGAGTCTCCATCTTCAAAGGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16364:2115 1:N:0:CGATGT\' GCTTTCTCAAGGGTTTCTTCAACCGCTGATTCGATAACATCAACAGCCTTGGTTGTCTCAGTTTCTTCAGGTTTTGCTTCCACCTCTTTCTCCGGTGTTTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16436:2145 1:N:0:CGATGT\' TTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTGTTAATCATTACT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16458:2199 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGCATGCCGTCGTCTGCTTGAAAAAATTTTCGGGCGGTGGCTACGCGGCTGCAGGTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16584:2011 1:N:0:CGATGT\' TGAGGAAAGCCCCTGGTAAATAGCCCAAGACCAACAAGGGAAACCACTGGTACGGCAACAACCGGGGTAATCAGCCTTGTCATATTTCCCCATATTTTGCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16714:2042 1:N:0:CGATGT\' CCCAAAAATGTTTAACTTACAAACTCTTCAAAGTGTTCCAAAACACACATGTTTGCTCTTTTTTCACTTCTCTTTATGTGATTCTTAAGCAACATTACGTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16606:2070 1:N:0:CGATGT\' GGAGATGCTACAAGTATACACGAATGGTATCTTTTCTGGATTATTTGCAAACACCGATGTTTATCTTCAATCCATTGGCATGTTTGTCGTCGAACAGTGAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16502:2087 1:N:0:CGATGT\' AGAGAAGCAAGTAATTAGGGCTGGATCCGGACCCAAACCCGTACCCGGTCAGAAAGTTACCGTTCACTGCACCGGCTTTGGGAAAGATGGGGACCTTTCCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16609:2100 1:N:0:CGATGT\' TCCGCTATGAGTGCTCGGTAAAACGACCATTTTCCTAACTCTTCCATATCGAACAATGGTGATGGTGGTGGATCTTGGTAGTCTTTTGCCATGTCTCGTGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16661:2175 1:N:0:CGATGT\' CAAACATCTTTACCATCACCATTCAAAACAATACTTTTAGCAAAAATAGAAGCTTCATTAGAAACCCTTTCAAGGTCCATTTTATATGCTTTTCCAATCAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16633:2184 1:N:0:CGATGT\' CGCCGGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTAGACCCTACCTCCGGCTGACCCGTTTCCAGGGTGGGCAGGCTGTTAAACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16573:2198 1:N:0:CGATGT\' GCGAGCTTTTACCCTTCTGTTCTACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16963:2025 1:N:0:CGATGT\' GTGGTGTTTCATCTTCGGCGTTCATACAGCCTAAGATCGGTATTTCATCGCCGTCGATTGAGGTGTATATTGCTGGAATGTGTACGGATATGCCGGTTATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16896:2035 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAACAAAAAAACTTATGTTTCATCACAGCTTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16835:2043 1:N:0:CGATGT\' CTTACTAGGAATTCCTCGTTGAAGACCAACAGTTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16818:2056 1:N:0:CGATGT\' TTGCAGCAATCTCATTGTGAGGAAGACCAGCAGCAGAAAAGAGAGGAATTTTCTGTCCTCTGGCAATTGAATTCATGACATCTATCGTGGAAATTCCCGTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16884:2119 1:N:0:CGATGT\' ACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAACTAAGGCCAGGAGCGTATCGCCGGCAGAAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16782:2140 1:N:0:CGATGT\' TTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGATCAGCACTCGGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16755:2145 1:N:0:CGATGT\' CCGGTCTCGTCTGTCTGCTGCAACGGGGTCCGGAAGCTGAATAATTTGGCTTACACCACACCTGAAAGACAACTAGCTTGTGCTTGTATTAAGCAAGATAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16777:2172 1:N:0:CGATGT\' ATGTATACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAACTAAGGCCAGAAGCGTATCGCCGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16797:2177 1:N:0:CGATGT\' ATTAAAATGTACAGATAATCACATATACACATACATACATCATTTGTTGCCTCCTTCCCCAATGAGATAAGAGTTGTGGGTGGGTCATGAGCGAGCAGGAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16822:2220 1:N:0:CGATGT\' CTACGAATCTAGGTTTGTCGCCCTGTCTGAGAACACTTCTGACACGCCTTGACATGCTTAAAAACTTGGTCACTTTTCTTCTAGAAGAAGCCTTGAAGGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16884:2234 1:N:0:CGATGT\' TACCAGAGTTCAGACCAACATGACAGGCAAAAACATCCTACTATCATATTCAGACATGACAAGAACGTACAAGATTATTACATCAGCATCCGCTACTAAGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16805:2234 1:N:0:CGATGT\' CCTTTGCAACCGCTCCTCGAACAGCTTCACCCAACTTAACCGCCTTTTTCCTCATCTCGAACCCTTCATCTGACATCATCAATGTCCTCACCGCATTCTCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:16827:2238 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGCCGTCTGCCTTATAAACCAAATTACTCAAATTAGTACCCTTTTTCCTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17215:2009 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAATACAGTACACGAGAGTAAACTTTGCAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17108:2028 1:N:0:CGATGT\' GGGAGCAGGAGTGATGCCAAATGCGGTGAACTCGTCAAGTACTGTTATCGGCAAGTGCCATTGTTTTGTATCGAGTTGTCAATAATCAGAATTGCTAATCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17201:2040 1:N:0:CGATGT\' TTTCGCTCGATCCTGAGTGCGGAGCCTCACTTTTAGAGTCATTACCAGATGATGCCTGGGTCGAACCTTCTTTGCCGAGGGAAACCTTTCCAACTTCATGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17003:2082 1:N:0:CGATGT\' GTATGATTAGAGACTCGACTAGTCACTATGGCAAAAGGACTAGAAGTGATGGAGATGGCATCTCTATATTTCAATCTTCAAATATTTGGATTGATCATTGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17102:2145 1:N:0:CGATGT\' CTTGCATTAGCCACAGAGACCTTCCATATCCCTGCATGTTAAAGGCAACCATCTGAGCCCCATGCATCCACCCAATGAGAGGGTTGTAATTCGATGAGGTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17165:2174 1:N:0:CGATGT\' CCACTGTTGTTGCTGTTACATCTGATGCCGTTGAAAATGTCCTTGTTGATGATGATCTGACGGCTGCTGTTGATCCTTTAATCAGACAGGTTGCAGCTTGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17098:2197 1:N:0:CGATGT\' CTGGCAGTATCTGGTCGGAAAAAGAAGCTAACTGGTCGGAGATTAACCAGTTGTTTTTGTTCTTGAGCAAACGTATTTTTGATCAATCTTGGTTCATACAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17019:2199 1:N:0:CGATGT\' GTGTAATTAAGCAATGGGTAAAGGTCTTACGATCCACTAAAGCCCATACATACCAACAAGGCAACAACTAACTTGGTACATGCCTCAAATAGTTTTATTCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17147:2221 1:N:0:CGATGT\' TAGGAGAGGAAAAACGAAAGAAAACAAAAAAGGAGAAAAAAATCGAAAAAATGCAATCTCCGAGAAATCGAACCGCGAAAAAACGCCGATCTCGAACAGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17353:2012 1:N:0:CGATGT\' TGGAATTCGTCTTTGGGAACACATTGATCCAGATCTTCTTTTGGCTGTATTTCTTCCGGCTCTTCTGTTTGAAAGTTCATTCTCTATGGAAATTCACCAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17275:2089 1:N:0:CGATGT\' GCTGATCTTTTCTTTGCTTCTGTTAACCCCAAAAATAAAAAATAAAAATACATGATATGATGGCAACTCCTTGTCCTTTCTGAATTCTGCCACCTCTCATC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17336:2105 1:N:0:CGATGT\' CTTTTGGTTCCTTCCCCTTTCCTTCTTTGGCTTTCTCCTTTTCAGCCTTCTTCAACTTCTCCTTATCTTTTGCAATTTCCTTCTCAACTTGCTTGTCTGAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17408:2114 1:N:0:CGATGT\' CACACCAGCATTCAACATGCGCTTTCCCTCATCTGTAGTTGCAGCTTCATCATGGTATTCGTACTGCTCTTTCTCAGTGCCATCCGTAGCTACCCATCCCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17251:2114 1:N:0:CGATGT\' GGGCAAACGGCACGAAGGAGATAAGAAATAGATAGGGAATGTCTGATGAAAAATACATGTGCCATTGGAAGGAATCAACCAATGTTCTCTCTTACTTCGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17365:2118 1:N:0:CGATGT\' CAGTTGCACTAAACTTAGCCCAGTTGGTGGCCCTGCTCAGCCAATCCAAATTGTCCCGCAAAAATGTATCAACAGTAGTACCAGCATGCATAATTGCATTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17457:2144 1:N:0:CGATGT\' CTCAACTTGAAACCCGATTTTCTCACCCAGTTTTACCAACTGATCCTCATTGGTTATCGCCCTAGATCCGTTCCTTGATAGAATGACAATTTTAGGCTTAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17467:2172 1:N:0:CGATGT\' CTCTTTTCCATTACTGTCCTCTCCTGACACATTTGGCACCTTGATTTCAGGCTCTTGGACCTCATTCTTCTTGGAGTCATCTCCGGAGGACTTTTTCTTCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17646:2110 1:N:0:CGATGT\' TATCACCAACCATCAACTTCAAGATACTAATTGTGTTTTACAACAACAGGGAACACAATGGATGAATCCGAAGTTACAATTAAATTGACCAGGAAAACAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17694:2180 1:N:0:CGATGT\' CCCGAAGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17867:2050 1:N:0:CGATGT\' CCGGATTTTTCACAAGAACGTCAACAACAATATCAGCTCTATGAAGGTCAATGTGAGGAAGATGAATCCCCGAAATATCTGCAGTTGGCTTACCGAACCCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17967:2191 1:N:0:CGATGT\' GTCCGAACACGACGGGGCTCTCACCCTCTCTGGCGCCCCTTTCCAGGGGACTTGGGCCCGGTCCGCCGCAGAGGACGCTTCTCCAGACTACAATTCGAACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17936:2194 1:N:0:CGATGT\' CAGGGAAGTGATGATGATGGGGCAGATGATGGTGATGTATCGGAGGAAGAAGAGGACTCGGGGGTGGAGTCCCCTGTAGTTGAAAATGGGCTCGGGTTGCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17949:2234 1:N:0:CGATGT\' TTAAAGTTTGAGAATAGGTCGAGGGCATTGCACCCCCGATGCCTCTAATCATTGGCTTTACCTGATAGAACTCGTTTAGAGCTCCAGCTATCCTGAGGGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:17992:2243 1:N:0:CGATGT\' TCGCTGATGTTATCGCCTCAGCTTGCTGTGACGGCACACCTTGTGCCTCTAAGCTCTTTACAAGAGCGAGAGGATCGACAAGAAAAGCACGTTTAGGTTTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18196:2037 1:N:0:CGATGT\' CTTGGTGTTATTATCTAGAATCCAATCGGAGGATCAAATGATATCCAACCGTTCAACTTGTTCTCGCTACTTGCCATTGCATACTGATACTTATCATCCAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18027:2114 1:N:0:CGATGT\' GTTCTGTGATAAGATGCCTGTGAAGATGACCTATTCCTTTGGTTTTCCCTTGCAAAATGACGATGACCCCTTCGCATTGCAGCAGCTGCAGCTAAATGCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18140:2188 1:N:0:CGATGT\' TGTACTCGTGCTCGTTAACACCAACAACGAACATAGGAGCATCCTTGCTGGGAGCAGAGATGATAACCTTCTTGGCACCACCCTTCAAGTGAGCAGCAGCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18151:2229 1:N:0:CGATGT\' CACTCCCGGAGACTGGGTTTCCGTTGCCCTCACAATCCACGTCAGTCCGCACCCCGAGCCGATCGGCGGACCGGATTTAGGCCGTTCCGCATCCGACCGAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18205:2249 1:N:0:CGATGT\' CGGGAGGGAAGCGAATGGGGGCCGGCGATGTGCCTCGGTCGGATGCGGAACGGCCTAAATCCGGTCCGCCGATCGGCTCGGGGTGCGGACTGACGGGGCTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18377:2005 1:N:0:CGATGT\' NTTCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18312:2015 1:N:0:CGATGT\' CCGAAGCGACAAAGGGCTGAATCTCAGTGGATCGTGGCAGCAAGGCCACTCTGCCACTTACAATACCCCGTCGCATATTTAAGTCGTCTGCAAAGGATTCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18277:2040 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTATCATTAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18386:2074 1:N:0:CGATGT\' GCGGGTCGAGCCACCCTGATTCGGAAGACCTTGTCAAGGACAACTGGTTCGAACTCGGTCACTTCAGATGATGGTGGTGGTTTGGTGGGTTTAGGGGCTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18495:2107 1:N:0:CGATGT\' CCTGTACGCAAGGGCAGGATGGCGGGTATTCAATCATGAGGAAGAAGCTCAATACCATGGACAATAAGACCCGACTTATAAGAGCTGGTATCCACACCAGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18353:2150 1:N:0:CGATGT\' ATGAGATTTTCAGGATTTTCGCCTGTTTCTTCTCGTCCTCGCTGAATGAGGTATCATAATCAACAAACTTCACAGCCTTTTCATATCTCCTAGATGCCCTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18265:2154 1:N:0:CGATGT\' GGTCTTTATAACCATTGAACTACCCGATGCAAAAGATGTGAAGTTGAAGCTTGAACCTGAAGGCAGATTCTGCTTCTCAGCCATGAAAGATGGCAACCCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18461:2195 1:N:0:CGATGT\' CGTTGCTCTTGTTTGCGCAATGTCTCAAACTTTTCCACGGTATCAATATCAATCTTATGCTTTGTCTTTGGCTTAGGTGGCTCAAAAGGGCAGGTCAGAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18346:2203 1:N:0:CGATGT\' CCCTTCTGTTCTACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18377:2221 1:N:0:CGATGT\' AAAACAATCACAGTAAACAAAAGCACAACCCTAATAAACTGAAACAAATAAAACAACACATCCCAACCGTGCGGCGATCCTGTAACCTTAACAAAATGTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18465:2238 1:N:0:CGATGT\' GCGAGTTATCATGAATCATCAGAGCAACAGGCAAAGCCCGCATCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18403:2245 1:N:0:CGATGT\' ACGGAACTGGAATTTGTCATTCCATTGTGGGCAATTGTCGCCGTCTTGGTCGACCCGCGTCCGTAATTTTCGGGCCGGGTCGATCCATATCACGGCGTAGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18321:2246 1:N:0:CGATGT\' CCGTTATTGTTGATTGCTTTTTTTTCTATCCTTTTGTCCTTGAGTAGAAATCGTACTATCTCAGGTTGTTTAGCCGCAACAGCTAGGTGCAAAATAGTATT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18516:2009 1:N:0:CGATGT\' ATGATCTTACAATATATATCATTACTAACATGTTAAAATATAAAAGCCTTACTTTTATCTCTCAAATTGAGAGACATGTATTATTATTATCATAAGACTAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18576:2016 1:N:0:CGATGT\' CCAATGATCAAGTCGGGTTTGGCTTGCAATTCTGCTGAAATCTCATTTGCAACATCCTCAGTGTAAGTCTCAAGGTATGGCCAGACTTCGAACCTGGAAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18575:2089 1:N:0:CGATGT\' CCGACACCGGAAATATATGAATCGCCGAAGGTTACTTCGAACTTGGTTAAGAAAAAGGAGACTTTGCAGATACCGCTTTTGGACATCAATTTTCCTCCAAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18722:2154 1:N:0:CGATGT\' GAGAACAACCATTCATGTGCCCTGGTCTTAGGCACAAGGAAAATTCCACAATGATACATGAATGATTTAGAGTCTGATTGAGCATCTAGAAGCACAGCCCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18607:2157 1:N:0:CGATGT\' CAGGTCTCCAAGGTGAACAGCCTCTGGCCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18645:2191 1:N:0:CGATGT\' CTAGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGGACTCCCTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18603:2230 1:N:0:CGATGT\' GGCAGCTAATGTCATCGGCGCTGGGAACTCCCTCAATGTATCAGCCTGAAGTACAATACTGGCTGACAAAGCAAAGACGGCTCCCATTAGGCATAAAGCAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18935:2082 1:N:0:CGATGT\' TCGTGCTTTATCATCTAACGGTAATTCATCTCCCGCCATTTTTAAAATTCCGAATCTGAAGTTCAAGTTGGGGGAAAATTAGGGTTTGTTAAATGAAATTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18852:2128 1:N:0:CGATGT\' GAGATTACTAAAGCAGAACTGTGGATGCTGAAGTCAGCTGGTGTTCAGTGTGCTGGGAGTCCTTGTTTTTGGGTGGACTCAGATGGAACCTATCAAGAAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18955:2133 1:N:0:CGATGT\' CCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18895:2134 1:N:0:CGATGT\' CCAAGATCGACAACCCTAAGTGTGAGGAAGCACCTGGTTGTGGAGAATGGAAGAGGCCAATGAAGAGGAACCCAGCTTACAAGGGCAAATGGCACGCTCCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18932:2147 1:N:0:CGATGT\' CGGGGGGTTTGAATGGATAATCTGGGGGGAAGTGAATAGTGACAAGAAAAACTCCCCCAGCATAAGGACTGTCAGGAGGACCCATAATAGTTGCTTGCCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:18940:2212 1:N:0:CGATGT\' GCCAGTGTGATTGAAGCTTATTGTTCGAACTGGCCACCTGAAGTCATACAAGTCATTAGCAGAAGAAGAAACCAGAACTATCAAGTTGGAGGCACATGCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19123:2066 1:N:0:CGATGT\' CGAAAGACCAGCTGCTTGAGCGCTTTACTGGATTTGTTCCAGCAGACTCAGAACCGCTGCTCGAATCAGTTGAAGTTGAAGCGTTTCTGCAGTAGTTTGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19048:2096 1:N:0:CGATGT\' CACAAATTCTCCCAGCACATATTTGTTGCCTTTGAGTTCCAGCCTGTCCCAGATTGGAGCAGTAGCAAGTACAAAATGAAGGTGTTGGTGAATAGGGTCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19200:2106 1:N:0:CGATGT\' GTGGGTCCATTGGTCCCTTGAAAGGCCTTCTTTAGGTACCCCTTTTCTAGCCCAAGGTTCTCACATAACAAGTCCAATAATTGCTCCGCTAGCTCCTCTAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19015:2178 1:N:0:CGATGT\' TTCTTATTCGGCGAGGTACTAATAACCGTAACCTTAACACCAAACGCCTTAGCAAATTTCACCGCCATATGACCCAACCCACCTAATCCAACCACACCAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19029:2191 1:N:0:CGATGT\' ATAAAGAAGATCTGGCCCCGGAAAGCTCATCTCGATTAGCAAAATGGAAATCGGATACATGTTTTCCGGCATTGGCACCACCGCTTCTATGGGTGGGAGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19188:2219 1:N:0:CGATGT\' GCCAACATTCACTGTGGGTGGAAACCAGGAGTTGCTGATGGTGGTGCTAATGTAAGCCCACTTGGATGCCACTCTGGAATCAAGTCCCATTATTCCCTCCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19129:2229 1:N:0:CGATGT\' CCCGTATGTGGTGAGAACAACATTACTTTGAGCTAAAAGTTCAGCACCTTTTGATCGACCTTGTCCATAATAAACACAAACAGACAAGGAACCAGGCTGAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19008:2243 1:N:0:CGATGT\' GGACAGCACTCCCGGAGACTGGGTTTCCGCTGCCCTCACAATCCACGTCAGTCCGCACCCCGAGCCGATCGGCGGACCGGATTTAGGCCGTTCCGCATCCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19345:2002 1:N:0:CGATGT\' NAAAGATTTGAATCTAATTCCCCAAAGCTTTCACCCTCAACATGACAACTGACGATGCTCATCTCTGGTTCTTCAAATACAACAAAGTCCAATCCCTTAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19484:2020 1:N:0:CGATGT\' CTGAATAGAATGTACCGAAAGAAAATGTAACTTACTTGTTGGAGTTGGAGATATACATTGAAAAACAGTAGCTTATTACTTTCACATCCTTGGAGGCCATT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19352:2040 1:N:0:CGATGT\' TGCGCATTAAAGTATCCAGATCGGTTCCCGTTCCAGAAGAATGTCACATGTCCAAACTTGACGGTTTCACTGCAAGCAAAAGTGCGTACACCATTGTGAGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19269:2085 1:N:0:CGATGT\' GCAGGAAAGATTATCAATTTGATGCAATGCCTCATTCCCATTCCTATTGATTGCGAAACAATAGGGTATGAGGGTACACAAGCATCACATAACAAATACAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19328:2116 1:N:0:CGATGT\' GTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACCTTGGGGGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19393:2128 1:N:0:CGATGT\' CCAGCCTTGGCAGCTCCAGTGCTGCTGGGAATGATGTTAAATGAAGCAGCCCTTCCACCTCTCCAGTCTTTCATTGATGGGCCATCAACAGTCTTTTGAGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19290:2185 1:N:0:CGATGT\' CTAGCTTGCAACCTCTTTACAATCTCATATTTGTGCTCAGGGAAAACGCCCGCGAATCCATCAGCTTTTTCTATCAGATCATCGATTGGCAAAGCAGCAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19742:2005 1:N:0:CGATGT\' NCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGTCACACCTTCGCAGCTAGCTTCTTAGAGGGACTATGGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19574:2071 1:N:0:CGATGT\' ACAACCAACACAAGCGCGCTAACATCCCTCAAAAAAACAAGGAAAACTATGGAGAATCATCAACCAAAGGTCTCCGAAGCTGCTGCAGCTCGTTGCTCATT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19604:2085 1:N:0:CGATGT\' GGTTTTTGTTTTGAAGGGAAAATGAGTGAAACCCAGAAGTAGAAATGAAGTTAGACGAAGAAGAGCTGAGTTTTGAAGCAATGCACGTAAGGCGTTTGTTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19690:2092 1:N:0:CGATGT\' GCCAGACAAGAGATCCTGGTATACGAGCATGATTGATGGAGTTGAGTGAGATTTCTCTCTCTTCGACCACTTCCTTGTTCCTCGCTGAGGAGATTTAACGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19738:2097 1:N:0:CGATGT\' TGGGTGGTCAAGGTCCCTCATCTGTGGCAGTGGGTGGTGCTGGGGGTGGTGGTGCTGGTGGGTATAGTGCTCCTTTAGGCGGGGCCTATGCTGGGTCTCAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19502:2102 1:N:0:CGATGT\' TGGGTTTCATTTGCAGGTACATGGGTCGCACTTGCAGTTGTCTCCGCACTTGCATCCTCCGTCCTCTCCACTCATTCCCATCTCTTTGTTGTCCACGTACG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19531:2128 1:N:0:CGATGT\' GGAAACGTTCACGTTGTTTGCGCCGAGTTCGAGGTACGCTTTGTGGGACACTGAGTGTCAACTGCCCCAAAAGTGTGGGGAGTTGGGGCTTTGTGAGGATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19669:2166 1:N:0:CGATGT\' CCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATAATGTTATCCCATGCTAATGTATCCAGAGCGTAGGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19664:2187 1:N:0:CGATGT\' ATACAATTCCATATGGTGCAACATGACCAATAACAAAGCACAACAATGAAAAGAAGGATAGATAATTTAGAGACAACAGTGCATCCAAGTAAATGATACAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19595:2241 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGAGGTATCTCGCATGCCGACTTCTGCTTGTAAACTAGGCACTAGGCATGGTAGTTGCCTCCATGCGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19893:2049 1:N:0:CGATGT\' CATGAATCATCAGAGCAACAGGCAAAGCCCGCATCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19944:2061 1:N:0:CGATGT\' CCCCGGCCGGCACGCAGCAACCCGCTCTCGCCGCGCGAGCAGCTCGAGCAGTCCACCGACAGCCGACGGGTCGGGGAAGGGGACCCCCCCCGCCAACCCTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19859:2062 1:N:0:CGATGT\' ACTTTTCGGTTTACCTTCAGGTATGGCAAAGCACCGATCACATTATCATAGTCGCTCCTATTGACTTGGACCATCTTAGATAAACGCAATTTGCGCTTAGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19823:2093 1:N:0:CGATGT\' CTTTCGATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGGTCACATGGAACCTTTCCCCGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19896:2109 1:N:0:CGATGT\' CAGCGATCTCTTCCCCAGGTTTCTTCGAATCAAGAACTCGACATATCGTCATGGCCAGTTCATCTCGTGAAAGTTGTGAGGCAGTTCTTTGTACTATTTGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19919:2123 1:N:0:CGATGT\' ATAGTAATCAATGTTTAATGTCATACCCGACAATGACCACAGCTCCAGCTTTCCCCTTGAGCATACTCTTCCCATGGCGAACAACGGCTGTGAATCTTTAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19881:2132 1:N:0:CGATGT\' CCGGACACTTCACCGGACCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGTTGATGACTCACGCTTACTAGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19765:2133 1:N:0:CGATGT\' CCAGTAACGGAAGTATGAATCTCGATATGATCGGTTTTCCTTTTTTGTAGACGACTTTGGCTTTTTGGAGGATCGTGGAGCTGATACTTTTTCTGGGTATT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19780:2149 1:N:0:CGATGT\' CACCACTTCGCTGAGGACTCACCCCATGCAATTCGAAGTACAAAGTTGAGCCTAATCGAGTCTGAGATTTCTCATCATTGTCCTGTGTATCAGATGGAAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19887:2173 1:N:0:CGATGT\' CCCCACCTGACAATGTCCTCCGCCCGGATCGGGCCCCCGGCGGGGGGGCAGCCGCGGAAAAAAAGGCGGGGGGCGGGCCCCCCCTCCCCCCCGACATGATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19912:2174 1:N:0:CGGTGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTACGCCAATATCTCGTATGCCGTCTTCTGCTTGAAAAGAAGGAAGGAATTTGCCAGCAAAAACCAGGGGAGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19757:2182 1:N:0:CGATTT\' CGAGTCAGACGAACGATTTGCACGTCAGTATCGCTTCGGGCCTCCACCAGAGTTTCCTCTCGCTTTGCCCCGCCCCCGCATAGTGCACCCTCTTTCGGGTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19929:2184 1:N:0:CGATGT\' GCCGTAGCGAGAAAGGTCGCTCCCTGTTGGGGCGAGTAGGTGAGGCCCCTGATGCATAAGAGAAGTGAAGGCATCCTTGGGCAAGCCAAAACCAAGGGCAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19945:2225 1:N:0:CGATGT\' CTTGGCCGACCACTCGTCGCCGGATTTCTTGCATACGAATGTGTAAACACCCATTGCCGGAGATAAAGGAGATGGGACGAGAGAGTTGTGGGTGTGAGAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:19876:2236 1:N:0:CGATGT\' CCTCTGTATGTCAAGGACTCTTTACCGAAGCCAGCAAGATGTGGTGCGAATGGCATCATCCATGAACCCACAAACCAAAATGAAGCAATCCATAATAGCAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20218:2007 1:N:0:CGATGT\' NCACTCATCAAAACCAGTATCATCAGCATCACCAGTTTCAGCAGGCAAACGGGTACCATGACCACTATAATGAACAAAGAGATAATCACCAGGCTCAGCTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20219:2030 1:N:0:CGATGT\' CGCCAATCTCCCTCATGGTGTCAAAATATTGGGTCACCAGGACCATGTCCATGATGTCCTTGGCAGTAGTGCCGGGCACATTCTCAGAGAAGTTCAGCACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20126:2038 1:N:0:CGATGT\' CTAATTTCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAACTAAGGCCAGGAGCGTATCGCCGGCAGAAGGAGCAAGACGACCGGTGCACCCCGAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20224:2057 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAGACACAACATCAGCGTCAGCGATGTCACGCTCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20187:2074 1:N:0:CGATGT\' ACGGGGGTGATCTAAGAATACAATAGATATGGGGAAGGCTGTTGTTGTTCTTACCAGCAGTGAAGGTGTCACTGGAACTATCTACTTCGCCCAAGAAGGCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20034:2136 1:N:0:CGATGT\' ACCAAGATCTGCACCGACAGCCGCTCCGCCCAGGCTCACGCCACAGGTTTTGCGGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGTACTTGCCCCGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20097:2206 1:N:0:CGATGT\' TCTCGCTTACAGACCAAGCCGACCCTTCAATGTAAATCTTGTATCTGTGTATGCATTGATGTGACAAATCAGACTCCTTGAATCCCTGCCGCACTTCTTTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20194:2243 1:N:0:CGATGT\' ACAAAATTGTAATCAGGACTTCTCCAGTATGTCCACCATTGTTTCCAAAGGCATGATTTAAACTGACCCCATGTTGATTGGGCATATTGGGTTGGAAAATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20400:2056 1:N:0:CGATGT\' CGAGAGAGCAGAGAGCGAAGAGAAGGGTCGTTGTCGATGAACGAAGTGAGGAAAACGGTGCCGTTTTCGACGAGGGGACGGAAAGAGAAGAGAAGAAGAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20337:2063 1:N:0:CGATGT\' GGCCAAAGTACTTGTCTCCGACGAGGCTCGTAAGGAATTCTCTTCTCTCCGTCGCACTTTTGACGAAGTCAACCTCCAACTCTCCACCAAATTCTCTCAGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20324:2103 1:N:0:CGATGT\' ATTTTATAACAAGGGAGGGTTTGTTTGGATGGAGTATTATTTTACAAGAGGGAGTATCGAAAATACAAGAATGATAAGATGAAAAAAAAGGGGGTGAGGGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20468:2122 1:N:0:CGATGT\' GTGGCTTACTTGCATCATCATGGCTATGAGGATAAACTTCCTTGGTATCGTGGAGAGGAATGGAACTACCTTCGAGGAGGTCTAACAACGCTTGACCGTGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20357:2123 1:N:0:CGATGT\' GTGTAGTGCTAGTAGTAGATGGAGAATTCTCCTTTTGTTTGCTCTCAAAAAAGGTTGATCCTTTCTTGCACGCTTAGCCGTCTTGTAAGTTTAGGTGTCTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20336:2159 1:N:0:CGATGT\' GACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGCATAAGTGGGAGCTTCGGCGCAAGTGAAATACCACTACTTTTAACG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20434:2160 1:N:0:CGATGT\' TGGCATGGACATCTAAACACATCTTAACCATGAAAGTCCGCCTTGATGAACAGAGAGTTACGAAGGCGGCCTCTCTAAGCAAATTCCTGGAAAGAAGTTAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20461:2182 1:N:0:CGATGT\' CACCGGTCCAAATTCGAAGATCCTCAATAAAATCATCAATATTTGAGTTGTTTAAAAAAGAAATGGATTCGATAACCCTGTCAAGATCCTTGGTAGAATAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20357:2188 1:N:0:CGATGT\' CGCGCGGCGAGAACGGGTTGCTGCGTGCCGGCCGGGGGACGGAATGGGAACGGCTCCTTTTGGGGCCTTCCCCGGGCGGCGAACAGCCGACACCGAACTGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20591:2043 1:N:0:CGATGT\' GGGGGATTAGGTTTCTTGTATACTGGCACGGGTGGTGGGAGCGGTTTCTTGTATACTGGCACGTGTGGGGGATTAGGTTTCTTGTATACTGGCACGGGTGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20578:2077 1:N:0:CGATGT\' CTCAGATTCAATTTGCCTTGCACTACATCTATTCTCAGGCAATGCTCGATACTTGTCAACTTCATACAAGTTGGCCACTTGCTTCTCTTTCATGGAAGCAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20607:2118 1:N:0:CGATGT\' TTTTATATTTATATAAAAACTATTATTTATATTAGAATAAGATTATATTTTCAAATTCATGATATTCTAAGATATTCTATTCATCAGTAATGTTGATGATT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20616:2168 1:N:0:CGATGT\' CCGTCGTGTTCGGACCCTGTCGCACCATGAGGCGCTGTCGCCGAGTCGGGTTGTTTGGGAATGCCCCCAAGCGGGCGGTAAATTCCGTCCAAGGCTAAATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20577:2231 1:N:0:CGATGT\' CCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20990:2014 1:N:0:CGATGT\' CCTCCTTGTGAGGATTATCTCCTTCTTTATGACCTCCAATATTGAGTTTCTCCTGTATCGTGTGAATAATGCCTGCCATTTTTGTGTTTGTTTTAATTTGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20856:2054 1:N:0:CGATGT\' TCTCAGCACAAATCTCAGCCTTGCACACAATCCTTGTCCTTGCAAGGATCTCGCCATACTCTTCATACAAAGCAGGATCAGAGTCTGTACGATTATCAATG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20967:2118 1:N:0:CGATGT\' CTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGGATGCTCTCACTCGAACCCTTCACTGAAGATCAAGGTCGGGCGGCGGTGCACCCACAGGGGAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20969:2158 1:N:0:CGATGT\' ACCGGATTAAACCCACATGAACCAAACCGGGTTCTCCATTGAGCCAAGGACTCGTGCCTCTCGAACCGGTCCACCCCTTCACATGCCACTACATTGCAAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:20982:2239 1:N:0:CGATGT\' GTCCGTACCAGTTCTGAGTCGACTGTTCGACGCCCGGGGAAGGCCCCAAAAGGAGCCGTTCCCAGTCCGTCCCCCGGCCGGCACGCAGCAACCCGCACTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:21175:2092 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAATAAAACAAAGAAGATTGACAACAGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:21165:2213 1:N:0:CGATGT\' CCCGATTCCCTTTCGATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGATCGACTAAACCATGTGAAAGTGCCGTTCACATGGAACT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:21082:2225 1:N:0:CGATGT\' CCTATCTCATTCCTCGGGCCATTTGTTTGACCTTGTTCAGGGGATCGACTGCATCTCTGATGATTACTACACCTTCAGGGCGCAGAATTCGGTCCATTTCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:21359:2032 1:N:0:CGATGT\' GTTCTACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTACGTTATCTTTTAACAGATGTGCGGCCCCAGCCAAACTCCCCACCTGAAAATGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:21318:2062 1:N:0:CGATGT\' GTGTTTTCCTTACATTGTCAGGAGTAAAACTATTGTTTTGCGGAGGAACACTTGTGGCTTTCCTGGCAGAAAGTCGCAATGTCATACAAGCATAGAAATCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:21283:2071 1:N:0:CGATGT\' TTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:21330:2113 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTTTGCTTTTAACAAAAGTGAGATATTTTATTGTACCGAGAACAGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:21259:2196 1:N:0:CGATGT\' CTACCACATCAGAATGGGGTGGTGGTGGAGGTGGTGGTGGAGATGAAGGGAGAGCATCCTGAATCTGCTCCGGCTGTGTATCTGGTGGTTGACCAATTGAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:21383:2211 1:N:0:CGNTGT\' CTAGGAGTATAATAACCATAACACAAACCATAATTTAAGATGTGCCACAATTTGCACAAGTTCTATGTACATTGCAATAAGAAAGAACCAATCGAAACATC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:21345:2221 1:N:0:CGATGT\' TCCAGCAAGAAGCAGAAGGTATTGAACATGTCGACCAAGTAGAAATATAGCATAATATCGATCATTCAATCTTTGGACGGCTACAATATGATCTCCTCTTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:21377:2241 1:N:0:CGNTGT\' AGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGTTGACGGCAACGTTAGGGAGTCCGGAGATGTCGGCGGGGGGCTAGGGGAGAGTTATATTTTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1376:2265 1:N:0:CGATGT\' GGAATGTAGCATGCTCATCGGGTCCTGCACAATATTTGCAACCAACGGCTTTGCAGTCCGCGTCAAATAAGCATCGGACTATGGTTTCAGGGCATGTTATA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1418:2308 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAACAAGATAAGTGAATGCGCTTTGCGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1340:2313 1:N:0:NGATGT\' CTTGAACCGATGNCCACTTAGAACATATTCCACANTGGCAGGAAGCCTCCTACTACGTTGCAAAAATGGCAAAAAGTCTTTCGTCTTCTTTGCTGATGCTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1416:2391 1:N:0:CGATGT\' CTAGGAGAAACAACTCCGGTTGAAAGGAGAAACATGGAAGGCCTGATAATCGAGCAGTATTTCGCCTCTCTGAAACTTCTATTTTGTGGTCCTAAACCTAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1465:2404 1:N:0:CGATGT\' CTTTGCAACCGCTCCTCGAACAGCTTCACCCAACTTAACCGCCTTTTTCCTCATCTCGAACCCTTCATCTGACATCATCAATGTCCTCACCGCATTCTCTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1722:2250 1:N:0:CGAGGT\' GTCGTCAGCCAACGTGAGAGTGTCAAAAACGATAAACCAACCATCAGCATGAGCCTGTCGCATTGCATTCATCAAACGCTGAATAGCAAAGCCTCTACGCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1618:2272 1:N:0:CGATGT\' CTCATCACCAGCAGGCCATTTACACAACCTAACAATCCCACACTTTATTGAATTCCAAATTTGCCCTTCCCTCTCTTTCTTCCTAATTTCTCTCTCTTCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1610:2301 1:N:0:CGATGT\' GACTTTTTACCTTATTAGCAATGGTTTATGAAACAAATCCATTTCGATTAAGCAAAGTCTATTATACCAAAACGCAGCCTCTTCACAGGTGCTTAAGCCTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1646:2427 1:N:0:CGATGT\' CAAAAAATGGGGCTGTGCCCCGCCTCCGACTCACGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGAAGCTCCCACTTATGCTACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1624:2439 1:N:0:CGATGT\' CCACCATTGACGGATAGATTCAAGTATTTGAGCTCGGTGAGGTCTTTGAGGTCTGATGGAATGGTGAACTGACGAGTACTGGATCCAGCAGGGTCTAGTCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1880:2270 1:N:0:CGATGT\' GCTTCTTCTACTGTTCCCCAATCAGTGCTGTAAACTAGTAAATATCCTTAAAATTAAACTGTAACTCTGATATCATCACAAATTCAAAACAGCAACGTCTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1755:2270 1:N:0:CGATGT\' CTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAATCGACTGTTCGACGCCCGGGGAAGGCCCCAAAAGGAGCCGTTCCCAGTCCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1877:2290 1:N:0:CGATGT\' CCTTCTTGTGATATAGTTGCCGGATTCCAACAATTTGGAGTTATACTCTGCAAAAAACCAATCATAATTCTTTGAAAGAAATTCAGAAACCGTGGATTTGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1838:2296 1:N:0:CGATGT\' AAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1926:2308 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAACGTCACTGGTTACCATCCACCACACTCCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1832:2325 1:N:0:CGATGT\' GTCATTAACAATACCTAAATCACTACTCTCTTCGTTCGATTCAAGCTCTTCCGACTCCGATTGACACCTCGCCACTTGAAGAAAGGGAGAAGCGAGAAGGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1920:2377 1:N:0:CGATGT\' TTCACATTCCTCACTCTCTTCTCTCTCAGTCTTAAGCTTACATTATGGGTAAGGAAAAGGTTCACATTAACATTGTGGTCATTGGTCATGTCGACTCTGGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1952:2406 1:N:0:CGATGT\' CTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGCTTAGGGCTGCATTCCCAAACAACCCGACTCGGCGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1825:2463 1:N:0:CGATGT\' CTCTGATACAAGTCATCTACAGTCATTTTCCTTGAGTGAAGGCATTCCTACTAGGTTTCTTTTGACTTCTCTCATGTGAAACAGCAGGCATCTTTGATATC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:1970:2464 1:N:0:CGATGT\' CTGGAATTCACAGTTAACCTGTGAACTGGGAAACTCTTAGCAGAGTCATCCACAAGGCTGATGATACACATTTTAAGACCCAGATAAGGCTTTTGCTACAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2008:2273 1:N:0:CGATGT\' CCGATCAATATTATCAGTAGCCCTCCGAATCGCATGAGTCCGTATCTGGGTGGGGCGCATAGCAGTTTCAAGAGCAGAAAGACGGTGATCAAAAGACCCCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2231:2296 1:N:0:CGATGT\' GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAACATAAGAAAACGCAAGAACTCACGACCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2218:2416 1:N:0:CGATGT\' CTAGAGTGGGCCCAGCATATGCTGGTAGGCCCCACCCGTAATCCAAGTACTCAAGAGTACATCCACCTCTAGTTATATCCGATACTATAAAGTTTCGGGTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2109:2446 1:N:0:CGATGT\' CTTCAATTGAAAACCATGACTTCCAATCTTCTTCTTCATAGATGATCACATGTTTGAGCTTCGAAACGATCCGAGAGCCTTAACAACAGTTGCTCGTAGCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2035:2476 1:N:0:CGATGT\' CCGTCACCCGTCACCACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCGCAAAGGCCGTGCGATCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2266:2251 1:N:0:CGATGT\' TACAAAACCATCCTAGATAGCTCGTCCGAATGCAGTTCCGTCACCTGCACTTCTAACCGGTAACCTGAAGTGAAGATGTGTACAAGCCAAATCCAGCAGCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2330:2272 1:N:0:CGATGT\' ACAGCATTCAATTGAGAGGATACATTAAATAGGCTTTATTAGTATTTGTAACCCTTTTCGAACAAGCTCTCAGAAGCTGCACTGATAGCAGGAGTTGCACC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2332:2309 1:N:0:CGATGT\' GTAACAGATTGCTGATAAAGCACACCACCAGCAATAGTAAGGAGAAGACAGACCAACCCAATAGGACTAGCATGTTTATCCCAAATAAACACATTAATAAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2278:2356 1:N:0:CGATGT\' CGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGCTTGGGGCTGCATTCCCAAACAACCCGACTCGGCGACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2290:2383 1:N:0:CGATGT\' GTGGAAACAACGCTGAAAGTTTCAACATTGAAACCTACGCTCAGAGAATGAAAGAGGATGATGAAAAGCGGCGCTTGTTCTGGGAAAAAGGACCCGATGTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2326:2404 1:N:0:CGATGT\' GTTTCTGTAGAAGTTTATCCTCTTGTAATCTTGTAGGCCTTGTGGAAGTGTGACATTTCCTGGATCATCCATCCCTGTAATTCACATTTGAATTTATTACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2416:2417 1:N:0:CGATGT\' GGGATTTCAAAATAGAAACTTCACAAACACGGTACCTACCTCCATATAGGTCGTAGTCATATATATGTTGCAGAGATTAGGACTTGCAAAATGCACGTAGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2378:2439 1:N:0:CGATGT\' ATACAAACATAGTTTCAAGGAGATAGGTGAGAGATCAAACTCACTCAACTCCCACCAAAGCCAACCTCTGAAACCTCCATATCCGAACGGTTTAAGTTGGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2453:2476 1:N:0:CGATGT\' GCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2477:2484 1:N:0:CGATGT\' CTAACGTTGCCGTCAACCGCCACGTCCCAGTTCAGGAATTTTAACCCGATTCCCTTTCGATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2261:2492 1:N:0:CGATGT\' GGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2528:2373 1:N:0:CGATGT\' CGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2623:2391 1:N:0:CGATGT\' TTGGTCTCGAAAATGAAAAGATTCTATAAAGCCTGGGGAAAAACCTCCAAGTATCGGCAGCATCAATAAGACATGTCAAAACAGATGCTAATAGCAACAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2739:2393 1:N:0:CGATGT\' CCCATGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2515:2434 1:N:0:CGATGT\' TCAGAACTTGAACTTGCCGCCGATGTAAATGCGGCGCGAGCCGGTTTCGTAGCGGAACGGCAATTCGGGGAATTGCAGATAGGCCGACTGATCCGACTGAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2532:2435 1:N:0:CGATGT\' CTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2563:2450 1:N:0:CGATGT\' CCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2822:2327 1:N:0:CGATGT\' TCTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGATGCTCGCGCAGTCGCACTATCGGACGGGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2846:2359 1:N:0:CGATGT\' GCTGAATTGAAGGCTGTTCAACAAATGAGTGAGTAGAAGCTTACGGTGAAGCGTGGACTCAGAAGTTGTGGTGTCTTTGCTCCTTCATAATCCCACAATCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2897:2365 1:N:0:CGATGT\' CGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2997:2373 1:N:0:CGATGT\' CCGACGGCCGGGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2976:2376 1:N:0:CGATGT\' GTCCAGCCTCACGCGGTGCCCTCCTCTTTAGGGAACAGGTAACCCACCCCTACGAGCAAGTCACCTGAACCAACTCTCTACTTGGAGAGGGCAGGCAAGTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2825:2413 1:N:0:CGATGT\' CCCAAGTCCCCTGGAAAGGGGCGCCAGAGAGGGTGAGAGCCCCGTCGTGTTCGGACCCTGTCGCACCATGAGGCGCTGTCGCCGAGTCGGGTTGTTTGGGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:2952:2414 1:N:0:CGATGT\' GGACAAGGAAACGATAACGACGAAATGAAGATACCAATGCCACATTAAATGTAAACTGAAATACAGGCCTAAATAACGACGACCTGAAAAAGAGTGTCATT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3193:2270 1:N:0:CGATGT\' CGTGGCTTTGACCAGTTTATGAATCTGGTGATCGACAACACTGTAGAAGTAAGCGGCAATGATAAAACAGATATCGGCATGGTGGTAATTAGAGGAAACAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3037:2281 1:N:0:CGATGT\' CATCCGAGTAGCAAGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3118:2325 1:N:0:CGATGT\' CCAAAGTACACAAACTTGAATTTACATCACCCATTTTTTTCCGATCTCCCAAACACAACACTAGAAGAACAACTCATTAAGAAACCACTTGTCGAAAAAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3233:2354 1:N:0:CGATGT\' CTAGCCAATCCATGAGTATACCATGAAGTTACAAAGGTTGTACCTGTAAACCAACCTCCTACAGCGAAATAAGCACAAGGAAAGAGCAATAGACCAGACCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3199:2358 1:N:0:CGATGT\' CCTGGTTCAGGAATTTTAACCCGATTCCCTTTCGAAGCTCGCGCGGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGATCGACTAACCCATGTGCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3217:2390 1:N:0:CGATGT\' TCCAGAAGAATATTTCAAAACACGAAGGAAAGCTTTTGTCCGTTGAGTCTTCTGTTTTGTGCAAATAGCGAGAACCCTAGGTTTAGCCATTTGTTTGCCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3113:2415 1:N:0:CGATGT\' CAAGACGATTCAGTTTACGCTTCGACATCACTGTGTTTGTAACATTCAACCGTGAGTACTCCCAAACATAAGGCATGTACAAGTCAAGCGCGTGAAGCAAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3006:2420 1:N:0:CGATGT\' GAAAGACGCATGAGACATTCGCCTTTAGACTCATCCGAGGTTCCTTTGTTAGCTTCAGCAACTTCACGCTCAAAACCAACGATGATGTCACGGTCGCACCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3131:2427 1:N:0:CGATGT\' GTCCGTACCAGTTCTGAGTCGACTGTTCGACGGCCGGGGAAGGCCCCAAAAGGAGCCGTTCCCAGTCCGTCCCCCTGCCGGCACGCAGCAACCCCCGCCCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3193:2429 1:N:0:CGATGT\' GTCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCTTGCGGATGTTAACGCAATGTGAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3246:2435 1:N:0:CGATGT\' TCATCTTGATCATCTCTACCCCTAGAACGCCTATCACGATCATCATACCTACTTCCATGCCTTCCATCATGCCTAGTCTTGTCCAAGTCCCTATCTTTGTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3191:2487 1:N:0:CGATGT\' CTTGTTGTCGGGATCATTAGGGGCAAGGAAACGATTGCCTTGGCTGTTAATGGTAGGTTGTGCACTTCCTCCAATAGCATACATTTCCCAATGTGTATAGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3290:2253 1:N:0:CGATGT\' CTAGGATGTGGACTAGGGTTCGGGTAATTGGGCTGAGCATATGGACCAGGATACTGATATTCAGGCTGCAGATACGGGTATGGATGTGATTCAGGATATGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3302:2341 1:N:0:CGATGT\' TCCTGCGACTGTGTTGCTGCTCTCCATTGACCTCTTCTTTCAGAAAATATCTTGTTATGCGCAGCAGAGCCTCCATACTGATGAGCAAGGGTGTCTCCCAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3312:2355 1:N:0:CGATGT\' TAACAAGTTAGGGTTTTTCCCCAAGAAATGACCCCACCATCTCAATATTAAGATGTGGTAGTGAAATGCATCTTCTTCATCCCCATCTGAGAATGGCCGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3481:2418 1:N:0:CGATGT\' CTCCATTTCAACACAGTAACTACTTCAATTACCAAAGTAATAATCAAATCACACTTTTAATGTCTTTTTCTAGTAAGATCAGATCAAAAATACACCACCAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3387:2436 1:N:0:CGATGT\' CGGCCGGTGCCCTTGGCGGGTTTAATGCGCACGCCGATGGGGATGAACATTGTTTCTAAAGGCGGCCAAAATGTGCTGGAATTTCTCGAAAACGATTTCCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3265:2445 1:N:0:CGATGT\' CGATCGGCAAGATGTCGGTGTCGCTGCCGCCGAAAGCCGCATGGGCGGCCTTAGCCATGCCCAAAAATTCGTCGATCTCTGGTGCAGTGAAATCGTAAGAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3480:2490 1:N:0:CGATGT\' CAAAAACTTTGATTTCTCATAAGGTGCCGGCGGCGTCCTAAAAGTAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGCATCTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3743:2251 1:N:0:CGATGT\' CTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3619:2252 1:N:0:CGATGT\' CTGAGAAGTAGTCTAGTCTGATGTGATATTGAAGCGGTTTTTTAGTTTTATTTAGTTTCTTCAGGCTTGTCATATTGCTTCTCTTAGTTTAACGCTTCAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3659:2297 1:N:0:CGATGT\' ATTTGAATATCCCTGAGAGAAGGTCGAGAGGGATGAGGTGGAGTTTGTGAAGAAGCCCAAGGAGGCGTGTTTTTGTCTCCATCCGCAAGTTGCAAAGAAGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3638:2340 1:N:0:CGATGT\' GTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3509:2355 1:N:0:CGATGT\' CAACTTTTTATTAAATGCTCCTATTCATTATAAGGCGGGTTACAAGTCTCTTGTTTCCGTCTTCCATCTGTTGCTTCGCTAGTGCACCTTAGAACAGTCGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3587:2403 1:N:0:CGATGT\' CGGAGTTCCAACCATGTAGAATGAGTAGAAGTTGATTCCTGCACCAATGCTCGGCCTTGCAGTCCCACGAAGAACACCACAACCGGTTGTTTGTGGGCAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3750:2409 1:N:0:CGATGT\' CGCTCTTTTATTGAAATAGATAAATAAACATAAATATTTAATTAGACACATTTAGCAGGTTCCCATGACCATGCAGCACACATTTTGCTACAACATTCTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3709:2445 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAATCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAATTGTGCTTAACCTGTTATCTTGTCTTTATT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3670:2460 1:N:0:CGATGT\' AGCCAGTCAAGTCCCTCGTACAAACCTTCACCAGATGTAGCACAAGTGCTTTGGATATACCAATGGCGCTGACGAAGGGAGTGGAGACCAAGCTTATCAGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3748:2479 1:N:0:CGATGT\' GTCCTTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3844:2256 1:N:0:CGATGT\' CCGAGACATCTAAAGAAGTTGAATTAAGATTGACACCGGCACTTGATATGACTAGAGTGAGGGATAAGAAGGACAGAGGGACTGTAACACTCAAGGTGTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3827:2266 1:N:0:CGATGT\' GACCCGACTCGGCGACAGGTGGCCTAGAATGCCATAGTCCCTCTAAGAAGCTAGCTGCGAAGGTGTGACTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3883:2281 1:N:0:CGATGT\' CACCCGATTAACATCCCTATCAGATTCATCATGTGATGACGAACTCGAATCCATTGACAATATAGTTGATGGATGATAATTCTCAATAGACAAGGTTGTCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3843:2338 1:N:0:CGATGT\' TTGAAAGTGTTCCCAAAGGAGATGCTATCTTCATGAAGTGGATCCTACATGACTGGAGCGACGATCATTGCCTGACATTGTTGAAGAACTGCTACAAGGCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3904:2388 1:N:0:CGATGT\' AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAAGAACCAACAAAACAACAGGGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3949:2430 1:N:0:CGATGT\' TGGTAGTAGCCGCTCTGGTTGGAAGTCCGGTGACTGGATTTGCACTAGGTCGGGATGCAACGAGCACAACTTCGCAAACAGGATGGAGTGCTTTAGATGCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3993:2446 1:N:0:CGATGT\' CTCTGCCTGTTCTCCATTAAATAAACACGACCGAGAATTACTCAAATCGGTCAAAAATCGAGTAATCGGGAACGGAACTCGAAGACGACGACGATGAAGTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:3954:2451 1:N:0:CGATGT\' CCGAGACATGGAATGTTCAGTTATTTAGATCCATTGATGGTGGTGCTGCTTTTGATTTTCCCGATACTCCTGAAAAAGCGGCCGAAGCTGGGCTTGTCAGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4202:2276 1:N:0:CGATGT\' CTGGGTACTTGACATCGAAGATGCTTCTTGACAACCCCGATGCTGCATCTTCACTGGCGTGGGATGAGGACCATGAACTGCTTGAGAAGTGTGTTTGCGCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4042:2302 1:N:0:CGATGT\' ATTCTCCATCTTTACAAGTTACAACACATATTGACTTATTAATGAAAACCCCATCTCACCTCTCCTCCTATTTCTGCTCAACATAACAAATCTCTTGTCTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4238:2303 1:N:0:CGATGT\' CTTTCCTTGACTCGTTCCAGAACTAAGAGTGACATTAGTAATAGGTTTGGTAGTTAGAATAGGAGTAGAATCACCATCCAAGATTCTTTGAATATAAGGAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4129:2322 1:N:0:CGATGT\' GGGGATTTGAATTTTTGGATTTTGAATTTTTGATCGTTGATGGTCTTTTTTTTTTTTTTTTTTTTGGGGAAGAAGAGAAAAAATAAAAAGGGGGAGATTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4224:2335 1:N:0:CGATGT\' TTTCCCTGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4191:2372 1:N:0:CGATGT\' CTTAGTAACCAAGTCCTTGGTTCTGTACCAGTCACCACGTTTCATAGCACCTTTAAGAAAGGGGTCATGAAGACCATACAAATTGGTGAAAATGCGATCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4017:2377 1:N:0:CGATGT\' CTACTGACCCTTTAACACTATCACCATGCTGTGACCATCCATCATTAATAAGCTTGAACGCTTCATTTCGTGACAAAAACGACGCAAAAAAGTGCTTCTTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4082:2386 1:N:0:CGATGT\' GTCGTCTGCAAAGGATTCAACCCGCCGCTCGGTAGAATTGTGATTCAGAGCGGCCCTCACGGTGCATCCACCGCGATGGCTTGGCCCACGACACGTGCCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4057:2388 1:N:0:CGATGT\' CAGTGATCCTATATCTTTTTCAAGAAAGCAAGCACGCGCAGATGAAATGGTATGGGCATCCAGGGAAGCTTTGAGTGAGAGACATTCTGAAGGAATCCATG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4124:2406 1:N:0:CGATGT\' CTCCATATCGATACTAAGCTTTGTTTTTGGCTCCAGCCAAAACCAGCAGTTCAATCATAACCCAGAAATATAGATACATAGCAATATGATCAATCCAACCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4218:2452 1:N:0:CGATGT\' GCGACCAGAAAGACATTTCCGAGTACAATAAAAGTTGTTGCAACAAGTACCTTGACAGAGACTTTTTTGTTCAAAACAAAGTATGCAAATGCGATGTTCGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4317:2277 1:N:0:CGATGT\' ATAAAAGAGCTCCCGCGCCGATTAGTATATAGTACAATGTGAGTGAACATAGCACACTGCCTAAACACCTAAAAAAAGAAAAAAGGAAAAAAAAAAAAAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4385:2356 1:N:0:CGATGT\' GGCATAATTCATCATTAGTAGTCCGTGCTCTCTACAAACATCAGCCAACGTCAATGTACCGGCAACATTGGTTCGGATTGTCTCTGTTTTGTGAGACTCAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4425:2415 1:N:0:CGATGT\' GGGGTCGTCAAGGCTGAACCCGGATGTGAGCAACGCAGTCTCAAACAGAAGCAGCACTAAATCCTTTACAGATTTGTCATTCTTGTCGGCATCTGCTCTCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4454:2421 1:N:0:CGATGT\' CTACAATCCAAAGGTTTACATAGCCCAAAGTCCGATAATCTCAAGTGTCCATGTTTATCAAGTAGCAAGTTATCGGGCTTAATATCTCTATGAATATAGTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4349:2434 1:N:0:CGATGT\' CGGTCTTGTTCAACGCAATGGCGACTGCAGCGACGAATGCCACCACACAAACAACTGAGACACCTATAATCACACCTTTGTTAGCCATTTTTTTTCCCTTT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4314:2435 1:N:0:CGATGT\' CACTTACAATACCCCGTCGCATATTTAAGTCGTCTGCAAAGGATTCAACCCGCCGCTCGGTAGAATTGTGATTCAGAGCGGCCCTCACGGTGCATCCACCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4391:2456 1:N:0:CGATGT\' GACGGGCGTGGCTAAGGAGCTCAGCGGAGTAGGCTGGGTTAGAGCGTTGGAAAACGATGGAAGCAGCGGCCATAGCGGCAGCAGTTTCTCCGGCAAGATCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4384:2471 1:N:0:CGATGT\' TCCGTCTTTCTTCACCTCTCGATTGGCCAAGCAGAAGAATGTCAAGTAGTTCCTTGGATCCTCTTCAATCCCCTTAGCCTGCAAAGCAGCAATAACATCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4526:2273 1:N:0:CGATGT\' AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCTGCTTGGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4596:2310 1:N:0:CGATGT\' GCCGCGCCCTCCTACTCATCGGGGCCTGGTACTTGCCCCGACGGCCGGGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4707:2313 1:N:0:CGATGT\' TGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4612:2332 1:N:0:CGATGT\' GATTGATTGCCGTTATGCAAATGTTGTTCAAGTGGGGGCAAATGTGTTACCTTTGTTAGCTTACGTAAGTGTCATAGAGGGTTTTTGTTTTCGCTTGTTTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4691:2344 1:N:0:CGATGT\' GCTCTGGTAAAGAAGGGAAGTTTTCAACAAATACCTTCAGAAGAGGTGAACTTATGCAATAGACCTAATATTACACATATTTATAAAGGCTATAAATGACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4622:2358 1:N:0:CGATGT\' TGAAGGACTCACACCAATCATGATAAACTCCGATCAAGCCCCGGTCAAAAATCACAGAAAGAGTGTCTGCTTCATGTATCGGAACAATGTTCATGACCCAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4737:2419 1:N:0:CGATGT\' CTGAGTAGGAAAGTAACGGATGACATTAGCAGTGTTCCCTCTCCACAAGGACATCATACCTTCATCCTTAATGGTGCTTCCAAAACACTCACCAATGCCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4515:2485 1:N:0:CGATGT\' GCGGCCTTCAGGGTAGAGTAATTTGGGTTTCCAAGAATAGTAGAAGGAAGGGTGTAGAAGCTGCAGAAATCGGTAATCTCATGAGTCACTGGACTTTCAAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4654:2489 1:N:0:CGATGT\' CCAAGATCTGCACCGACAGCCGCTCCGCCCAGGCTCACGCCACAGGTTTTGCGGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGTACTTGCCCCAAC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4846:2295 1:N:0:CGATGT\' CATAACCTTGGCCAGGTTGACGGAGGCAGAAACCCGAACAACAGTACGGTGGGCCCACGTTCTCGTTACATCTTCCTCCATTCCCTATGCATGCTTCTGTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4924:2299 1:N:0:CGATGT\' CTTGTTACGACTTCTCCTTCCTCTAAGTGATAAGGTTCAGTGGACTTCTCGCGACGTCGCCGGCGGCGAACCGCCCACGTCGCCGCGATCCGAACACTTCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4941:2348 1:N:0:CGATGT\' ACTCGGAATTTGGCATTGGAGTGGCATGGAGGGGTTATATTAAACATAAGCGCTACCTTACACTACACCGCTTCTTGGTATCAAATCCACGTATCGGCCGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4977:2395 1:N:0:CGATGT\' CTCATTTGCACACAAAGGCGACGTAATCTCCGGGCTAGACTCAGGAGAAACCGAAGGGTAAATCTTATCACTAACCATTTTACTCACTTTAGAACAAAACC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4834:2400 1:N:0:CGATAT\' CTTGTCTTGGATTTTCGCCTTGACATTATCGATGGTATCAGAACTCTCAACTTCCAGAGTAATAGTCTTCCCAGTCAAAGTCTTAACGAAGATTTGCATTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4752:2403 1:N:0:CGATGT\' GTAGGGCATATCCTTCGTAGATAGGAACAGTGTGACTCACACCATCACCAGAGTCAAGCACGATACCTGTTGTACGACCACTAGCATAGAGAGAAAGCACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4958:2412 1:N:0:CGATGT\' CCCAAATCAGGGCTAGGAGCTTTTATATCTCCAGGAACTTCAAATGTCACAGTTCCATCCCTTTCAACAGATGCAAGTCGGTTCAGCCACTTGATCTTCCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4799:2439 1:N:0:CGATGT\' GTACTCTGCTGGTTTGCCAAGCCCAAATGGGTCAAACCCATAAACACCAACTAGGCTCCCATCTAACCACTCTGGAGCCTTGGCTCCTGGATACCATAATG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4989:2442 1:N:0:CGATGT\' GGTTAAGCTATTAGATATCGGAGGGTGAATGTGATGGCAAAAAGATAATAGAAAGTGCAAGTAGTTTAATGTCATTTTAATCCTTACCCTCTCAAATGTTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4787:2455 1:N:0:CGATGT\' ATGGCTGGAGGCTTTGGAAAACTCCAATAACTTCCCCAGTCTCAGGCTTGCTACTAGTAACACTCAAAGTGATCATCCCTTTCGACGAGGGAGTATTCTTA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:4915:2462 1:N:0:CGATGT\' GCATTTATCAACAAGCATCCACTCTCCATTAGGCCGTTGATCGCCTTCATAATATTTCTCACTGGACTCGGGATGAATCTCATGCTTGGATCCATCAATCG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5225:2314 1:N:0:CGATGT\' CTCCAAATCACCCATTTCAGTAAAACAAACATTTATATTCTCTTTTCAAAACGAAAAGTAGAAGCATCACAAACAAAGAACCAACACCAGCATCAATCACA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5079:2459 1:N:0:CGATGT\' TGCGGCGATGACGTGATCGTAGGGGGGGGGTCGGAGAAGCTGGGGGATCGGAGGATGGAGAGGACTAGAGATGAGAGCTCGTAGAAAACCCTAGAAGATTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5111:2465 1:N:0:CGATGT\' TGAGGAATCATGCTGGATAGAGGGCTTGGTGGATCCAAGACTAGAAGGAAGATTTAGCACGAAACAAGCTGCGCTGATGATCCAGGTAGGAATATCTTGTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5184:2480 1:N:0:CGATGT\' AGAAAATCGGGTTTTAAATATATGCAAAGATTAAATGATCTGAGTTTTAGGCCTTAATCTTGAATAGACTCGTACCTGCATTCTCAAATTCTATGGTCAAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5205:2482 1:N:0:CGATGT\' TGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5307:2255 1:N:0:CGATAT\' CTCCTTGAACACGATTCGCCAAATCAAATCTCGAACGGCTCTGATCATGACACGTGGATAACCCATCAACTCGATCAAGCAATCGGACGGTGTAGCTAGGG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5383:2265 1:N:0:CGATGT\' GCGTGATCAGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTAGACCCTACCTCC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5333:2280 1:N:0:CGATGT\' TCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGTAGCACGACCCGGCCAACTAAGGCCAGGAGC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5391:2288 1:N:0:CGATGT\' AAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACATCTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCAGGAATTTTAACCCAAT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5436:2326 1:N:0:CGATGT\' CCGCTGAATTTTGCAGCCTAATTGTCCTTGTTGTGTTTATCATTCCGTAGTGGTACGATCCCTGTGGATTCGGCCTTGGTCCACTTGCAGTAAGATTGGTC\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5342:2338 1:N:0:CGATGT\' CCTTTGTGGGATCTAGGTTAGCGCGCAGTTGGGCACCGTAACTCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAAATGGCCCACTTGGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5424:2351 1:N:0:CGATGT\' TTCTGTTGTTGCACCTGCATGTTTTGATTCCCCACAACCCATTTTCCCTAATATACTTAGAATTAATTTGATGGATGTATGAAAAGAGGGAGAAAGAATGA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5263:2387 1:N:0:CGATGT\' GCTGGCACAGCAGCGCTAGTATCTGGAGCAGATGCTGTTAATAAAGACACTGGAGAAAGACTGATAGTCGGAAGGTGGGTAGTGGATAGCATAGATCGGAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5423:2419 1:N:0:CGATGT\' GCAGAACGTTACGTCCTTTCAGATCAATGAAATAAAGAGTTTCAGGGTTAATTGAGATGAACGCTTTGATGATACTAACATGGCCTCCGCTAACAGCTTTG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5374:2435 1:N:0:CGATGT\' CACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGATGCTCGCGCAGTCGCGCTATCGGACGGGCTTCCCCCGTCTCTTAGGGTCGACTAACCCATG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5392:2436 1:N:0:CGATGT\' CGAGAAAGTACAATTCATTTGATGTTTGAAGCAGATTTTTGACCTAAAGCTGCACATAAATACTAACTAGCTTCTGAACAAAAAGGGAAACATGAACGAAA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5319:2459 1:N:0:CGATGT\' CTTTACTAAAAAATTCTTCCTCGGAAACAAGTTGAATGTCAGGGTACTTTGACTTGAAATCTTTGCATGCTTTTATAGCTTTGAGGTAGTGGCTCTTCTCA\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5351:2460 1:N:0:CGATGT\' GGTTGATATCATCAGTGGGCAATCTTGCTGCTCCTTTTGAGGAATGGACTGCTGGTGGAACAGCCCTGACTGCACTGATGGATGTTGAAAGAAGACACGGT\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5252:2479 1:N:0:CGATGT\' TCCAATAACCTTCCTAATGTTGTTGATCATATAAATGAGAGCAGTGGCAAACTCACGATCTGCTTTCTTTGACATTTGCAGATTAATTTGCGAGCCACTAG\n\'D7DHSVN1:151:D12V0ACXX:8:1101:5285:2496 1:N:0:CGATGT\' CCTATGTCCATGTTGAGTTATTGAAGCTGCAACATTTCTGTTATTATAATTAGGTGATCGATGAATCATATTTCCCCCTCCTCCACCCTTTCCGCCGCCAT\n;\nend;\n' + if not check_individual_results(cm, t): + res = False + print_success(res) + return res + elif name == "pxs2phy": + res = True + print("fasta ", end = '') + cm = "./pxs2phy -s TEST/test.fa" + t = '5 20\nTaxonA\tAAATTTCCCTGTCCCTTTAA\nTaxonB\tGCTCGAGGGGCCCCAAGACC\nTaxonC\tACGCTCCCCCTTAAAAATGA\nTaxonD\tTCCTTGTTCAACTCCGGTGG\nTaxonE\tTTACTATTCCCCCCCGCCGG\n' + if not check_individual_results(cm, t): + res = False + print("nexus ", end = '') + cm = "./pxs2phy -s TEST/Concat_Sequence2.NEX" + t = '7 21\nSequence1 AAATTTCCCTTTCCCTTTAAA\nSequence2 GGGGGGGGGGCCCCCCCCCCA\nSequence3 CCCCCCCCCCCCAAAAAAAAA\nSequence9 AAATTTCCCTTTCCCTTTAAA\nSequence10 GGGGGGGGGGCCCCCCCCCCA\nSequence11 CCCCCCCCCCCCAAAAAAAAA\nSequence8 TTTTTTTTCCCCCCCGGGGGA\n' + if not check_individual_results(cm, t): + res = False + print("interleaved nexus ", end = '') + cm = "./pxs2phy -s TEST/AA_interleave.NEX" + t = '5 250\nTaxonE AWWYHNTLNCRGWGEFRYLTHEFCCHWGNAFYHICHNYDNGPTTERFLTIQTWTARDRWCCKHSVHWNFQENFSTYGLKQRFQNQHSCNRHIVRQLWNNLRFFICICQIKRGKGNKCQFCILHYFIHLPSLACRLSYAFGYLRHNWFGTLTPYGFASPPNWYMRSEPSFGNSWNMAIQIANAFRTWKYRECGYSIKQSCDSTLMWPHRYWMIAQYTFQVTDSRTYDFITSSLVVYAFLCDAQARADCIDQ\nTaxonD HWPYHNEWNQRGWGVFRYLTHEFMCHQHRLFYHICHNYDHGPTTERFKAITTWTAQDRWKSGHSVHGDFQENFCTYGMKMRFQNQHSCNRHIGRRLQNNLRFNYCYCQIKRYKGNKCQFVQLKVDIHDKSLAANLIAASMYLRHMWFGPLTPYGFAVPPNWMMVSGPSFGKSWHMQIQIRNAYVTWKYRGKGYSICQSPQNKLMWPNRYWMIEIYTFIVTDIRTALFIQISLSEYAFSCDFIPRQDMNWQ\nTaxonC QVFYATEVNFRDIGSEGFLTCEFLDHFDAHEEKLLHNYVEKPWIEEPLWWRTRKRDDMYFSYHWDFLDFQENFDMHAYSMVMPQQHSYRFGEYRQVVNNLYYFNAGPMGHRQKMNNKQGCRMHYFIAYAQAQFNSGYHAEYLKMLSTGGLDLSGESSDPNWAKMSGESEGWSHWVAMLMRNYYRHGKSHGCKMFKHAYESEKLRCIGISSSGDQYCFTVRDSSGYRFDACVLECKTSLAACGHNANCGWP\nTaxonB QVFYHNEVNCRWINEKGILTHEPLDHFDAHNQHILANNVETPVIYRPLWWRTRKAMDRWFYKTSVHWDFQERFDTHGYSMVAPQQQSCNRAEYRQVVNNLRRFIQPQDGHGRKMNVKQGCRMHYFIARASLEFNSGYHAEYLKQLWLGGLDFSGEKSMLNWAKMSGESEGWSHWVYMLMRNYYRHGKLHGCSHRKEALESEKLRCIGIMRWWKQYAFKVRDISGYRFDRCYLICKTLLYDDGCKANCNWP\nTaxonA QVFTHNEVNCRWHIEKGILTHEPLDHFDAHNHHILANNVETPVIYRPLWWRTRKAMDMWFLKSSMHWDFQENFDTMAYSMHAPQQQSKHSAHYRQQVNNLRRFIQPQMGHGRKMNNKQGCRMHYFIAYASLQFNSLYHAEMLKQLWTGGLDFSGEKSMPNWAKMSGESEGWSHWVLMLMRNYYRHGKLHGCSHRKEILESEKLRRIGIMRWWKQYAFKVRDISGYRFDRGYFGCKTLLNDAGCKVNCNWP\n' + if not check_individual_results(cm, t): + res = False + print("interleaved phylip ", end = '') + cm = "./pxs2phy -s TEST/morph_data/morph_inter.phy" + t = '64 322\nErythrosuchus 00010000000100101010000001000000100010000?00000000000?0?00?010010000000001000?0000??0010000000000000000000?00??00000?00?01?0000100000000?010000?0000010000?00000000?0000000001?0000000??0000000000000000000000010?0000?00?00000000000000000000?00?000010??000000??1000?0?0000?000?00?000?100000?0?0??000000001??10??01010010000000\nEuparkeria 0000000100010000001000001100100000000000000000000000000000000?0100000001000000000000000000000000000000?000000100000?000?0000000000000000000000000001000000?0000000??00000000?0?0000000000000000000000000000000000?0001000000010000000000000?00?00?0000000?000000?01000?0??0000000000?000?1000000000?00000000000010??0000001?000000\nPROTEROCHAMPSIDAE 10000000000010000001000000000000000000000000000000100??0????000000000000000000000000000000000000000000?0??000000?00??00?000000000000?000000100000001000000?00?00000?000000000000?111000000000000000000002000000?0?000000000??0?0000000000?0000????0000001?000000??1000?0??000000?0?00000?1000000000??1000000????10??00?00010010000\nScleromochlus 10101?01000?00000110000001??00000??01000??00??????????1?????1????000?00?????00??001100000000100??00000?0???00?1??10??01?0???00?0?0?1?011101110000000??0000?0000?000?0000000000000?0000000000000000000?00??????????0001?0000??0?0000000000?0?0000???00?000?000?00??0000?0??000??00?010001?0000000???0?10000?000??10??????001?010000\nEudimorphodon 10001001000010010?00000?0?0000?0???00000??0?????????????????1????010??000000000?0011001011101000000000?0??0??010?1100?0?0??0??????11?011?01??00011111?1111111111111111111011111?100000??00?000000000???0??????????0000?00?0??00000??0000??0?001001000?1??0?00?01?0010??0?0000??00?11000??00000?????1000000?0000000??00?0000?01?000\nPeteinosaurus ??????????????????????????????????????????????????????????????????????00??0000??0011001????01?0???000????????????1?0?00?0??0??????11?01110101000??????1111?1?11111111111???1111?0???????????????????????????????????00?00?????0???????????0?0?1001?00?1?0000?????00??????00000?00?110?0????????????10000???000000???????000?0????0\nPreondactylus 10?0?????00?11010???000?0????00?????????????????????????????0????010??00????00??0011001???????0???0?0????????????1????0?0?????????????11101110001111??1111?1111111111?11110?110?0?0000??00?00000000????0??????????000??00?????0?00??0000??00001001?00?1?00?00??1?0010??0?0?0?0?00?110?0???00???????100000??0000000??0??0000?01??00\nAustriadactylus 1000??01?00?11010???000?0?00?0????????00?000????????????????????????????????00??001100????????????????????????????????????????????????11????????111111111?11?10?????????10?1??????0000??00?000000000???0??????????0?0??00?????0?00??000???0?001001?????????00?0????10??0??????????0???????00000?????????0???????????0??0000?01?00?\nLagerpeton ??????????????????????????????????????????????????????????????????????00??????01???????00100000001010100?1000001?1?0101000?10?101111011101011110???????0????????????0000?????????????????????????????????????????????0?00?????????????????????????0000001100??????0???????0000???????00???????????0??000????????0000????0???0?0??0\nDromomeron ???????????????????????????????????????????????????????????????????????????????????????????????????10100?000001111??1010???10010101????????????????????0??????????????00???????????????????????????????????????????????00?????????????????????????????00????????????????????0????????00?????????????????????????????????0???0?0???\nMarasuchus ?0???????0?????00?1????????????????????????????????0001??????????110000000000?00001100110100000000000001?111100011?1001100?00010111101110101111???0????000??010?0???000000?0??????0?????0????????????????????00??????0?00??00???00????????????????0000000?00??????0????00?000????000?00????0????000??100??0?????00????0?00??0?00?0\nPseudolagosuchus ????????????????????????????????????????????????????????????????????????????0??????????????????0???000?0?111110??1?1001101?00010?11????????????????????0??????????????00???????????????????????????????????????????????00?????????????????????????????00???0????????????????0????????00?????????????????????????????????0???0?0???\nSilesaurus 00?00????001000000100000?1??0000???0?0???????001??000000???00000?110000010000000101100010000100000100011?11111001011011001?000?1111???01011111100000???000?0000000??00000000?0?0?000000?0000000??0???????????00???00000000?000?0000?0000000000????000000?0000??1??000010??000??????1?00???00????000???001000????00000?000010001000\nSacisaurus ?0???????0????00011???????????????????0?????????????????????00??????????????0???1????????0000000?0100001?1?1110??1110111???????????????????????????0???0?0???00?????0000000???????0?????0?0?????????????????????????0??00???????00??00????000??????00?00???0??????0????0??00??????11?00????0????????????10??????0???????0???0?100?\nEucoelophysis ???????????????????????????????????????????????????????????????????????????????????????????????00??0001??1110100????????????????????????????0??????????000??????????0000???0???????????????????????????????????????????00??????????????????????????00??????0?????????????????????????00?????????????????????????????????0???0?????\nLewisuchus ??????0????????0011?0??????????????0?000?0001?0???000010????0????11000000????0??10??000????????????001???????1???0?????????????????????1???0???0???0??0000?????000????0?0000?????00?????0?0?????0???0??0?????00?10?0001000?00???0???00?00?0?00?????????????0??01??0????0???????????0?00????0??0?00????????0???????????0?00??0???00\nEoraptor 0010000010011000011?000?10000001??10100001000??????????????????1??10?00???0000??0?11001?0010000?01101??????10?0??1????1?0??00????11???0101?1?1?00000000000?0000?00010000000000000?0000??0000000000000???????????0?0000?00?0????0000?00000?0?00??11?00?0?0?00111111?00000?000?0111??0000001000000??00000000??00000???00?0000?00?000\nHerrerasaurus 000000101001000000100000110000011010000000000001001000101???0001?110000111000?000?1100110010000001101001?11111000111011101?0011111111101011101100000100000?00000000100000000000000000000000000000000000000000001??0000?0000???000000000000000011110000000000111111100000?00000?111111111?000000000000000000?0000010100000000000000\nCoelophysis 00000000100010100110000011010001101000000000?0010?100010????0000?110010111110000001000110000100000101001?1111100111101110??001?11?1?1101011101101000100100?00000000110000000000000000000000000000000000000000001??000000000???00000?100000000011110000001000111111100100000000111111110111111111111111110000000000??00000000011111\nLiliensternus 00???????0?????0011?000????????????0?000?1000???????????????0??0?11001001100000?001?001?0000101000101??????11100011??11????00111111???01???????0??00?00100?0000000??00000000?0??0?00?0??000?0??????????????????????000?00??????0?0???0000?0?00????000000???0??11??1????0??000??1??11?101??????1???1??????0?0????000?????00??011110\nZupaysaurus ?000?01010?????0011?0000100100011010100000000???????????????0??0?????????????????0?????????????????????????????01??0?111???00111111??????????????0000001?0??????????????000???????0000??0000000000000?000??????????00??00?0????0?00?10000?0?00???1?????????0?11????????0????0??1??????01?111111??????????0??????????01?00???01111?\nPlateosaurus 000010001000100101100100110000011000000000000001001000101??110001110000011000000101100100000000000001001?11101000011011101?00111111111010001011000000000000010000000000000100010000000010000000000000000000000000?0000?000000000001?0000000001010000000000001111111111111111110000000001000000000000000011111111111111110000011000\nPantydraco 00100010100??00?01?000001001000110100000010000010???????????00?011?000??????00????11001?0010100???1????1??????0??01??11?0?????????????01000101?00000?00000?0?00000??00000010?0???00000000000000000000?000?????0?0?000010000000?0000000000?0001????0?0?000000111???101?11??11?000?00??0?1?000000000???0001111????1111000000??00100?\nAntetonitrus ??????????????????????????????????????????????????????????????????1???0011??0???0?11001?????????0??01??????1010??0?1??1???????????????0100?0?1?0???????0?0?0100?000???00?????????????????????????????????????????????0?00?????0?????????????????0??00?0?0000?????1???????1??????0?00?00??????????????000???11110??1?????11111?1??0\nEocursor ?????????????????????????????????????????????????????00?????0000?010????????????0?11001??0?0100000101??????1??0??1????????????????????11???1??????????00?0?00????0?10000??00?0????0???????0?????????????????????????00?00??????????????????1111?1?111111?1????????????????00???00??1??0????????????????????0????00????0?00??0????0\nHeterodontosaurus 0010100010110000?100000001000001??1000000100000???100?1?????1010?01000000?0000??1011001110101000001010???1?10?00?10?0?1?0?????????10?11101110?100000000000?0000?0001000000000100000000??00000000000000000000000?0?0000000?0??0011111121111101111110110011?110?00000010?0?00000?00?010?0??000000?0??0000?1000000000??00?0000000?000\nPisanosaurus 0???????????????????0???????????????????????????????????????00001??0?0????00??????????????????????????????????????0??11?0???01???11???11???10??0??????00????????????00?0??0???????0???????0?????????????????????????0??00????0???????2?????111????????00??????????0???????0?1????????????????????????00?????????????????0?????1?0?\nPaleorhinus 1000000000000000010000000000000010000000000000000?0000000?001110000000010000?10?0000010001000000000000?0???00000?001000?10?01000?000?000000100001000000000?000010000000010000011011111110011100000000000000000001?00000000000000000?00001001000000000?0000000000?01000?0??00000000000?01?0100000010000000000000010??10000000010000\nRutiodon 1000000000000000010000000000000010000000000000000???????????11?0?0000001000001000000010000000000000000?0???00000?00?000??0101000000????????1????1000000000?00001000000001000001101111111111?111100?00?00??1???1?1?000000000???00000?00001?01000000000?000??00000?00000?0??0000?00?000101?000000001000000000000001???10?00000010100\nMystriosuchus 1000000000000000000000000000000000000000010000000?0000000?0011001000000100???1??0000010000001000000000000000000000??????????????????????????????1000000000?0?001000000001000001101111111011000110111120122111011000000?000000000000?00001001000000000??????00000???000?0??00???0???0??01?0000000??00????000000??10??1000000?01?100\nPseudopalatus 1000000000000000000000000000000000000000000000000?00000?????1???????????????????0000010????????????00????????????00??00?10?01000000???000001000?1000000000?0???10000??0010000011011111111110101010100210201111111?0000?000000?00000?00001?01000000??0?00?0000000?00000?0????0?000??00?01?0000000???0000000?000001???10?0000?01010?\nAetosaurus 0000111100000001011?000000000000110010000000????????????????0010???0????0??0??0?1100010?00001001?000000000000000000?000?10?0??00?000?000001000000000000000?0000000000000000000000?0010??0000000000000??0??????????0110?00?0??000000?00000?0?010??0000?000000000????100?0??0000?00?000?01?010000????0?00000?000001???00?0000?010000\nStagonolepis 0000111100000000010000000000000011000000000000000?000000111100101000000100000100110001000000000100000000000000000001?01?10?010000000?000001000000000000000?000000000000000000000000010000000000000000000000000011?1110000000000000000000000001000000000000000000?00100?0?00000000?000001?0100000??00000000?0000010??00000000000000\nDesmatosuchus 00001111000001000100000000?0?00011000000000000000000000?1??100101000000?0?000?00110001010000100??0000000000001001001001010001000000??000001?000?0000000000?000000000000000000000000010010000000000000000000000011?11111220000000000000001000010??00000000?000000???100?0??000?00??00?001?0100000??00?00000?000001???0000000?000000\nLongosuchus 0000111100?0??01011000000010000011001000??????????000?0?????00101000000100??0???1100010?0000100?0?000?0000?00100000??00?10001000000??000001100000000??0000?0000000000000000000000000?00?000000000000?000??????0???1110122?00?00000000000??00010000000?000000000??0010?10?00000?00?000001?01000?????0000000?0000010??00?00000000000\nOrnithosuchus 0000001010000010011?000010110000100000010000000000000??0????010110?0000000001?000100010000000001000000000001000??0??001?1?????????00?00000?100000000000000?0000000??00100000?0?0000000000100000000000000000000000?000000010?0000010?0000000000?00?000000????0000?0?100?0?000??000?001001?0100010??0?0?0000?0000000??0000000?00?000\nRiojasuchus 0100101000000010011001001011000010000000000000000?000000????1100?00000000000???0?1??0100?00000010?0000?0??010000?001001?10?010000000?000010100000000000000?00000000?0010000000?00?000000010000000000000000????0???000000010???00010?00000?0000?00?000000000?0000?00100?0?0000?000?0?1001?01000100?000000000000000???00?00000001000\nDromicosuchus 0000000110010000001?000011001011101010011?001?0?????????????10???0?0000?0?00?100110?0001?000100????01??000?000000000000?0?????????0?????????????0000?00000?00??000????000000?0?0??0000??00000000000000000??0??0???000?000????1?0000?0000??0?00?????????????00100???000?0?0000??00??0?10??010000?0?0?????00?0????0???00?0000?010000\nHesperosuchus 000000?110?10000001?000011001011101010011?0010000???????????10???000000?0????1??110?000????????????01??000?000000?00000???????????????01??1????00000?00000?00??0000???0?000000?0??0000??00000000000000000??0??0?1?0000100???1110000?0000??0?00?00?????00???00100101000?0?0?????001?00101?010000?00?00?0000000000????00?00000010000\nPseudhesperosuchus 0000000110010000011?00001100?0011010?0?1110010000?0??????????????000000?00??1????10?001????????????0???0?????0000000000????????????????1????????0000000000?00000000???000000?0?0?000000?000000000000?000000000001?0000?0001?00?0000?1000?00?00?00?????00???001?0???000?0?0?????00????101?0100000????????00?000??????00?0000001000?\nTerrestrisuchus 0000001100?????00111000011001000000010010000100001000???1??11000?100000000001100110?00011000100100000000?0000000010000000010100000000001101101000000?00000?00000000000000000001000000000000000000000?000000000011?0000?000?1?0?00?0?00000000001000000000000001001?1????1?000?0000?000?01?01?0000??00?000?00000??00???0?00000010000\nErpetosuchus 0000001110010000011100001000?00011100001100010000???????????0?00?0?00001????????110?000?????????????????????????????????????????????????????????0000000000?0???1001?????00000?000?0000000000000000000?0000??????0?000000000??0?0000000000?0?00?0????????????0000?0?000?0?0????000??10??1?0000000???00???00?00000????00?000???1?010\nGracilisuchus 0010011110010000011?0000101000001000100110001000??000??0????0000?01000010000010000??01000000000???0000?0???0011??00??00?00?01?0??000??11000110000000000000?0000000??00000000?0?0?10010?00000000000000000000000000?000000000??0?000000000000000????00??000?0000?0??0000?0??0000?0??00?00??000000???0??00000?0????10??00?0001?010000\nQianosuchus 0000101100001011111000??0?0000?0???01000?0?0?0??????????????0?00?110?00??0??00??1000000?1000100??00000?0?????????0???00????01?0?000???0?00?000001010000000?0000000??00000000?0????00000?000000?000000??0??????????0000?00?0??0?000?000000?0?00????000?000?00?001???100?0??00???0??00??01?000001??????00000?0?????0??00?000???10100\nRevuletosaurus ?000??0000?10010111?0000?0110000??00?000?000????????????????0????0000001?????????0??01000000000????000?0???0000??????????0?01000000?????????????000000?000?????000????0??000?0????0000??0?0????000000??000????????0000?00????0?000000000??0?00?????0???????0?00??????0?0??000??0??????0????0000?????????00?0????1???00??00???1?000\nArizonasaurus 000010100??????11010000011??00001000?0000000?00011?000100000000?010110101111??111000???01001000100100000000000000???0????????????????????????????0?0?00000??0??0????00???000?????00000??0000?000000000000000000????000000?0000?0000000000?0000????0000?????01?00???10?10??00??00?????000?0000?0?0?0??????000????10??000?0???01?000\nArganasuchus ???????????????10?1?0???????????????????????????????????????00?????0?0?????????????????????????1???0000000010000000?????1???????????????????????????0??0????????????0000?00???????00?0??000?????????????????????????0?0?0????????0??0?????000???????0??????01????????000?????????????00????0????????????????????????????0???0??0??\nBatrachotomus 000110101000?001111?0111000000101010101101100000??100000000110000000010111000?0111?0010010000001000000000000000???0000001?????????0???00??0?00000000000000??000000??00000000?0?0?00000??0000000000000000000000000?0000000?0000?000100000000000????000000??001000???10010??00??00??00?000?00000000?0????00000????10??00010000000000\nBromsgroveia ????????????????????????????????????????????????????????????????????????1?11??11???????01101010???1?0??????000?????????????????????????????????????????0??????0?????00?????????????????????????????????????????????????00?????????????????????????0?0??????0??????????????00??????????????????????0?????????????10??????00???????0\nEffigia 00100010001011010110100011000000110100000000111010?110111??00111110001001111??1101?010?10010111111111010110000?01?1100000010110000?00001011101011000?10000?0000000??0000000000000000100?000000000000?0000000000?1?0000000?0?0000000000001?0000?00?00010000001?00??1000?0?0000?000?100000?100001???00?00010?0????000000100010010100\nFasolasuchus ?0??0????00??001111?0000????????????????????????????????????10??0000000101??0??????????????????1???010?0???10000?0??????10101000000?????????????0000???0????000?????0000000????0??00?0??0000000???????????????????0?00?00????0?0000?00????0000????000??????01???????00?0??????????0??00?00?0????0???????000??????0??0??00?000??000\nLotosaurus 0001100100101100011?100001000010101000000?00000???1000?0????1100000000101110?111??0000010000011????00000?00000001001000000101?0?000?????????????00000100???00?0?00????00000??0?0?000?0??00000000000000000000?00?0?0000?00?0??0?0000000001?0000??????0?00???00000???010?0??000??0???0?000?000000?0?1????01000????0???00?0001?000100\nPoposaurus ??0???????0??????????????????????????????????????????????????????000110011110?111???000010001101001000100000000000?1?000?0101100000????????????????????0?0?0?00?000?0000????00000????????????????????????????????????0100?????????????????????????0000??0??0??????????????00???????0??0???????????1????0????????00??????00?0??0??0\nPostosuchus 000100111101000001100011101?0100001001110101?000010001000??0100?000000001100110011??01001000000100000000000000001001000000101100000??00000?100000000000000?00000000000000000000000000000000000000000000000000000??0000?000000000000000100000000000000?000000100000100010?00000000?00000000000000???0000000?0000010000001000?000000\nPrestosuchus ?1011011?0000000111?01111?0000?0??1010110010?0??????????????0000???????111001?00010001001000000?0000000000000000000000001010100000000000000100000000000000???00000??00000000?????00000??00000000000000?00?00??0???0000?00?0??0?0000000000?0000????0000000000000???1000?0??0000?0??00?00??000000???0??00000??????100?00?000??000000\nRauisuchus ??0????1???000???1??0000???????????0?1?10?00???0??????????????000000000101001?0011?????0100000010?????????????????0?0000101010000???????????????0000?00000??000?????00?000?0??????00?0??0?00000????000?00?00??????00?0000????0?0000??0?00????0?????00000???0?00????000????000??0??00????00????0?0?0?????0?0?????1???0??00?????0?00\nSaurosuchus 010100111101000001110000100010101010001100000000000000000?0000????????010100??00???????010000001000000?0???00?0??0???00?101010000000000000100000000000?0??????0?????000?000??????00000000000000000000000000000000?0000?000000??0000000000000??????000??00000100???1000?0??00000???????0000000000??0??00000??????100000000???000000\nShuvosaurus 00100010001?1100?1011000111000001101000000001110101110111??001111110010???11??1100??10010010111111111010110000101011000000101100000?0001011101010000000000?0000000??00000000?0???000100?10000000000000000000000?1?000?00000000?0000000001?0000????0001000000100???1000?0??00000???11?000?000001??00??00010?0????00??001100??010000\nSillosaurus ?????????????????????????????????????????????????????????????????10111001?11??11???????01?00?1?1001000?0???00?10???????????????????????????????????????0????0?0?????000??????????????????????????????????????????????0000?????????????????????????000??????0?????????????????????????00?????????????????????????????????0???0????0\nStagonosuchus ??????????????????????????????????????00????????????????????????001000010100??00????010010000001000????????????????????????????????????????????????????000??0?0?00??00?????0????????????????????0???0????????????????0?00????0????????????????????000??????0??????????????00??????????????????????0????????0????10???????0???????0\nTeratosaurus ?001001110000000011100101?1101???????1?10101000001??????????00???0??00?????????0???????01000000?????????????????????????????????????????????????000000??????????????????000???????00100000000000?00000?00000??0?0?000?00000??0?000000010??00???????0???????01?0????00000??00???????????00?000?00000?????000?????1???00?1?????0?00?\nTicinosuchus 0??????????????1111?0???????????????????????????????????????0????0000001????11??000000001000000?000000?0?????00??00??00?10?01000?000?00000110?00???0???000?0000000000000?00000000?00?0??0????????0????????????????0?00?00?????0??0??00????000?00000000000?00???0?01????0??0000??0000000????0????00?000000?00000010??????000?0?0?00\nTikisuchus 000????1?1?????0011?0????????0?0???0?0???1???????????10?0???1?000??????????????????????????????10????????????????????????0?0??0??00???????????????000?0?????????????00???00??????000?0??000?????00?0?00??????00????00???0????0???0?00000??0?00??????00??????1?0????????0????0??0???????????0?????????????0??????????????????????0?\nYarasuchus 0????????1?????1?01?0??????????????0?0?????0?1???????????????????1??0000?1000?0?11??0010100000010??000?0????000??001000?????????????????????????0?01?0?000?00?0?00??0000?0?0?0????00?0??000??????0?00??0??00???????0?0000????????0??00?0???????????00?00???01??0?????0?0??00???????0?00????0??0?0????????000????????????000?0?0?00\n' + if not check_individual_results(cm, t): + res = False + print_success(res) + return res + elif name == "pxseqgen": + cm = "./pxseqgen -t TEST/test.tre -x 1 -l 10" + t = '>TaxonE\nCTGTAACTAG\n>TaxonD\nCTGTAACTAG\n>TaxonC\nGTCTAACAGG\n>TaxonB\nGTTTGACTGG\n>TaxonA\nTTTTGACTGG\n' + elif name == "pxssort": + res = True + print("sort by id ", end = '') + cm = "./pxssort -s TEST/Codon.fa" + t = '>Sequence1\nATGAAAAAAATATAT\n>Sequence2\nATGAAATTTAATATA\n>Sequence3\nAAATTTAAATTTAAA\n>Sequence4\nAAATTTAAATTTATA\n' + if not check_individual_results(cm, t): + res = False + print("sort by id rev ", end = '') + cm = "./pxssort -s TEST/Codon.fa -b 2" + t = '>Sequence4\nAAATTTAAATTTATA\n>Sequence3\nAAATTTAAATTTAAA\n>Sequence2\nATGAAATTTAATATA\n>Sequence1\nATGAAAAAAATATAT\n' + if not check_individual_results(cm, t): + res = False + print("sort by length (<) ", end = '') + cm = "./pxssort -s TEST/unaligned.fa -b 3" + t = '>Crypturellus\nGATCTAGTGCAGAGTTTGCATTCACAGATCTTATCGGGTTTTAACCAACAAAATACTTTATAACTAAACCACAGAAGTGACATGCTTACAAATGATTTANCAGAAACCAAGAGACTAGAATTTTAGCTGTTTGTCTTTTGGATGCCAAATTGAATCAGTTAAAAGCATCTCACAAAGATTAATGGGGAGTAAAATTATCTACCTCTTCCTCTGTATCCCTGTCCACAAAGAAATCCAAGAAACATACAGAGTATCTTAGCCATGCCAAAAGCAGTAGTATCTCCAGGGCTGCACTAGTGACCCCTGTGATAAACTTCAGGAAAAAGGGAAGTTGTTTGATCTTCTCTCCACACTCTCAAGCAATATGCTGTCTTTCCACAACAGGCTGAGCACACTGCATGTGAGAATTAGATGAGCCTCAGATGTCAAGATTTCTGAGGCATGGGTGGGAGATCTGAAATCTGAGCATACTGAGATCATGAGTCTATATTTAATCTTCCTGTTTTCAGGTTTTGGCTGCTGTCTACAAGGCCTTGAATGATCACCATGTCTACTTGGAAGGGACACTGCTGAAACCAAACATGGTGACAGCTGGGCATTCCTGCCCCAAGAAATACACCCCTCAGGATGTAGCAGTAGCAACTGTCACTACTCTCCTGCGTACTGTTCCTGCTGCTGTGCCTGGTGATTCCCTCTGTATTACTATATAGCCATTACTATGTATCAAACCATCACACTATCACTCTCACTGGCCTCGCTCCTAGCTCCTAAACTCACTGCTCTAGCACGTAAGGGTCAGGGGCTGTGGTGGCTGCAGCACTCAGCTTCTACCCTTTGCTATTGCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACTTAAATGCCATGAAT\n>Pterocnemia\nAAAAAGGCATTGTGGTGGGAATAAAGGTGAGTGTCTGTACATGTGTCTGGCTGGCACAATACTCTAAACACTATTTCCAATAAGAACTATAATATAGGGGCTGCACTCTCCCTTGTAGACCAGTATTTTGCTTGTTTCTGAAAATACCTAGAGGATCTCTGCCCCCATTCTCTGTATAGTTTTTGTACAAATATCCAGGACACATTTGTGCATTTACATATAATCCAGGACCTTTTCATCCAGCAAACGATGTACTTCCTTGTACGAATGTTACATCACACACTGAAATTAAACCTCTTCTCTCAGTACACAAACTAAAATCCTTTCTGAGTCTGACAGAACTCTTGAGCTGTTCCCTGCAGCCATCTGCATATTATCTGATCCTCTTACCCATTTCACTCCTTTCTTTCTCCTTTTCTTTAACACTTCTCAGATATGTCCCTTTAGCCTATTAAGTCCAATACTTTACCCACGGTTTGTTTGCAAAGACAGACTAGTCATAGGTCACAAGATAAGTAACAGATTGATCTCCATGTATTTTTCCTGTCTCCACAGTTGGATAAAGGCACAGCACCTCTAGGAGGAACAAATGGAGAAACTACCATACAAGGCAAGGAGAGATCTAAGTAGCCATAATTATGATTGGTAAAGTGAAAGCCATCAGATGACTAAACTCGTTCACAGCCTTAGCTGGTGTCATGTTACATTTCATGTTGAAAGCACTAAGTTCAGCTTTCCCATAAAGAACTGCTGTCAGTGAAGCACTGTTCTTTCATCTGCAGGACTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGTTGACTTTGGCAAATGGCGTGCAGTGCTGAAGATAACCAGCACAACTCCCTCTCAACTTGCTATCCAGGAGAATGCTAACACACTAGCACGCTATGCCAGCATCTGCCAGCAGGTATCTACCCTCTACTAATCTTTCCTGAGATGTTGTTACTGTTTCTTATTGTTTCCTGTGATAACAGCTAGATATTTTGAAAGATCAGTCCCTGTGAGAGGTTTCAGAGACAATGAAGAAGAAGAGCCATACAGCAAGAAGGAATACTATCAATGTTGGGRAAGACAGGAAGGACAGTTTTTCTGCCACATCTGCAAAGACTTTCCTGTTTTTCTTTCCTTAGCATGGATTGGTGCCCATTGTGGAGCCAGAAATCTTGCCTGATGGAGATCATGATCTCCAACGTTGTCAGTATGTCACAGAAAAG\n>Corvus\nCCATCCAAGGTAAGGAGAGATCTAAGGAGCCTAAGCTAAGGCCCAGCAAAAGCCATAGGGTGACTCACCTGAGACGCAGCCTTGGCTGGAGTCATGGGACTTTGCAGAGTTCTGTGCTGAAGAGCAGCTCTCAGTGAAGCACTGTTCTCCCTCTGCAGGGCTGGATGGGCTGGCTGAACGCTGTGCCCAGTACAAAAAAGATGGTGCTGACTTTGCTAAGTGGCGTGCAGTGCTGAAGATCACCAGCACAACACCCTCTCAGCTTGCCATCCAGGAGAACGCCAACACGTTGGCGCGCTATGCCAGCATCTGCCAGCAGGTACCTCCCCTCCAGCAACCTCTCCTGAGATGCTGCTGCCCCTTCTCACTGTTCCCTAGCATGTGATAACATGCTAGGTAGTTCGAAAGGAGAATCCCCGTGAGGGTTTTGGGGAAGACAAGGAGGAAGGGCAGTGCAGCATAAAGGAATGCCACTAAACTCAGGGCAAACAACAAGAACAGTTTTACTTCCATAGCTCTAAAGAATCCCCTGTCTTCCTTTTCCTAGCATGGCTTGGTGCCCATTGTGGAGCCAGAAATCCTGCCTGATGGAGACCATGATCTCCAGCGCTGTCAGTATGTCACAGAGAAGGTAAGAGATTCCTCCCTCTGTCCTCCCCCTCACAAATCAGCAGCTAAACTTTGTGCAGTTTGTGCTCACAGATCTCAAAGAAGTTTGACCAAAAATGTACTTCATAACTGCATCACAGAAATCAGCTGCTCCTAGGCAAATAGCAAACTAATAGAAAATCCACGAGTATTTTCCATGTGTTTGGATTTTTATTTCAATGGCAATATAAGCACTCTCAATCTCAAGAAGAGGTATCAGGACCAAACCCAATTACCTCAATTTCAGTACCTCAGTTGGCAAGGACAAATCCTGTAAATATGAACAATTGTATTATTGGTCATCTCAAAAGCAGTGGGGTCTCCACAACTGCAATCCCRGAGATAAATTTCATGAGAAAGCAAAATTCAACTAGATCTTGCTGCAGTACCAAAGAATAAACTGTCTTTCCACAGCAGGCTGAGGTGAAGATCTGAGCAGAGGTCTGTATTCATTCCTCCTGTTTTCAAGGTTCTGGCTGCTGTCTACAAGGCTTTGAATGATCACCACGTGTACCTGGAAGGGACACTGCTGAAACCCAACATGGTGACGGCTGGGCATTCCTGCTCCAAGAAGTACACCCCTCAGGATATAGCCATAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTTCCTGGTGATTCCTGATTCACTCCTRTCTCTTCATTCCCACTCTCTCTCCCACCTCTGACATGTCTGCTCCTCTGGCACCTAAAGGTGAGGGACTGAGGTAGCTGGAACACTCTGTTTCTAAGCCTTGAAACCTCTGTCTTACAGGAATCTGCTTCCTGTCTGGAGGTCAGAGTGAAGAGGAGGCTTCTGTCAACCTGAATGCCATGAAT\n>Anas\nAAAAAGGCATTGTGGTGGGAATAAAAGTGAGTATCTGTACATGTGTGGGGTCTATACTCACTCCCAACAACAACTTTTGTTTGTTTTTTTTCGGTTTTGAAATCCCTAGAATGTCTCTGCTACCATTCTCTGCATTGCTTTTGTACAACTAAACAGTGAAACATTTGCAACCGATGCAGGACCCTTTTGTCCAACAGCACCCATATATTTACCATTCACTGCAGTTACATCCTTCCATGCAATAACCTAATTAAATCCTTTCTGCAGCTGACAGAGCTGTTGATCTACTCCCCACAGCCACCTGCATATTGCCCCCATGACCCAATTCTCTCCTGTTCCTCCCCTTTACTGGAGCCCTTCCCTTCCTTCCACTAGCAGTCTGTTCAGCCCTATACTTTACTCACAGTTAATCTGCAAAGGTAGACTAGCTCTGGGGTGCAAGGCTCAGGCTGACCTCCCTCACTCTGTAACTCTTTCTGTTTCTGCTGTCTCTTCAGCTGGATAAAGGCACATCGCCCCTAGCAGGAACAAATGGAGAAACCACCATCGAAGGTAAGGAGAGATCTAAGAAGCCTTAGCTATGACTAGTGAAAGTCATGGGGTGACTCAACAGGAGTTGCAGCCTTGGCTGGTGTCATGGTACTTTTCAGAGTTATTTCTGAAAGAGCTGTTCTCACTGAAGCTCTGTTCTTTCACATGCAGGACTGGATGGACTGTCTGAGCGCTGCGCCCAGTACAAGAAAGATGGTGTTGACTTTGGCAAGTGGCGTGCAGTGTTGAAGATCACCAGCACAACACCCTCTCAACTTGCCATCCAAGAGAATGCCAACACACTGGCACGCTATGCCAGCATCTGCCAGCAGGTATCTACCCTTCTGCAGCCTTCCTTGAGATGTTTTCGTCCCTTTTTCACTGTTCCCTCTGATAATAGACTAGGTATTGTGAACAGTGGATCTCTGTGAGGGTCTTGGGAAATGTGGAGAAAGGGCAGTGCAGAAAGAAGGCATGTCACCAGAGACAATACAGACAGCCAGGACAGTTTTTCTTTCCCACCTCCAAAAACTTCCTTGTTTTTCCTTCCTTAGAATGGCTTGGTGCCCATTGTGGAGCCAGAAGTCTTACCTGATGGAGACCACGATCTCCAGCGCTGCCAGTATGTCACAGAAAAGGTAAGATTCTTGATCTCTGCACCCTCACAAATCAGTAGTTAATCTTATGCAGGGTTTGCATTGACAGATTTCAATGAGTTTTGACCAAAAAGGTCCTTCATAACTGTATCACAGAAATGGGTCACTCATAGTCAAATAATTAGCTAGTAGCAAATGTGAGAGCAGAATCCCTGTTTTTGGATTTCCAGTCAAACTGTCAATATAAGCATTCCTGAGCTGAAAAGGATACATTGGTTATAAAGGCATTTATTCCTTGTTCAGTATGTCAGTTTGTAAGGACAAATCCAATAAAAAAGGAAAATGTCCTAGTCATCACAAAAGCATCGGTGCCTCCAGGGCTGCAACCCCTGTGACAAATTTCAAGAAATTTAGTTTGATCTTCTCCCACTTCCAAGGAATTAGCTGTCTCTCCACAGTAGGCTGAGGTAAAGCATTGAGCACAGATGTGTATTCAATCCTCCTATTCGCTCCCCCAGGTTCTGGCTGCTGTCTACAAGGCCTTGAACGATCATCATGTCTACCTGGAGGGGACATTGCTGAAACCCAACATGGTGACAGCCGGGCATGCCTGCACCAAAAAATACACCCCTCAGGATGTAGCTGCAGCAACCGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTTCCTGGTGATTCTTGATTTGTTCCCATATATCCCTTCACACTGTCACTCCTACTGGCCTTGCTCCTCCATCTGACATGCTCATTTCTCTGGCACACAGAGGTCAGAGATGGTGGCTTGGCGGCTGGAGCGCCCCAGTTTCTAAGTCCTGAGGTCTCTTTCTTTCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACCTGAATGCTATGAAT\n>Eudromia\nAAAAAGGCATTGTGGTGGGAATAAAGGTGGGTATCTATACATGTCTGGCTGTCAAAATACTCTGAGCCCTGTTTCCAATGAGAACTATAACACAGGTGCCACATGCTTCTCGGCAAAACATTTTTCCATGTTTTTTAAAAAATCTAGATCTGTCCCCATTCTTTGTACAGCTTTTGAAGAAATAAGCAGGAAATATTTGTACATTTATATACGATCCAGCACCTTTTCATCCCGCACTACTTCCTTGTAACAAATGTTGCAACATTCACTGATACCAAACCTCTTCTGTCAGTACACAAATTAAAATTCTTTCAGAGGCTGACAGAACTCTTGAACTGTTCCCTTCAGCCACCTGTGTATTGCCCAATCCTCTTTTTCAGTGAACTCCTTTCTTCCCTTTTACTTCAACACATTTTAGCTATCTCCCCTTAAACTGTTCAGTCTCATACTTTACCTATAGTTGGTCTGCAAAGACAGACTAGCCATGGGTCACAGGATAAGTAACAGATTGATCTCCATCTATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACGACCATACAAGGCAAGAAGAGATCTAAATATGATCATGATTGGTAAAATGAAAGCCCTCCCCATAAAGAACTGCTTGCAGTGAAGCACTGTTCTTTCATCTACAGGGCTGGATGGACTGGCTGAGCGCTGCGCCCAGTACAAGAAAGATGGTGCTGACTTTGGCAAGTGGCGGGCAGTGCTGAAGATCACCAGTACAACTCCATCTCAGCTCGCTATCCAGGAGAATGCTAACACACTTGCACGCTATGCCAGCATCTGCCAGCAGGTATGTACTGTCCATAAGTCTTTCTTGAGATGCTGCTAACCATTTCTCATTGTTTCCTCCAAAGAAGAGCAAGAATGAGCAGCCAGACTGCAATCAGGATACTATCAGTGTGAGCAGGTTTTTTTTCCACATCAGCAAAGATTTTTCTGTTTTTCTTTCCTTAGCATGGGTTGGTGCCCATTGTAGAACCAGAAATCTTGCCTGATGGAGACCATGATCTCCAGCGTTGTCAGTATGTGACAGAAAAGGTAAGCCACCTTACTACGCTCCTCCCACAAAATCAGTCATTTATCTAGTGTAGAGTTTGCATTCACAGGTCTTAGAAGGGTTTGACCAAAAAAATACTTCCTCACTGCAACGCAGAAATGAGACACTCACAAATGATGATTTCATAAAAAAAAAAAAAAAAAAAAAAAGACTAGCATTCTAGTTTCATGTCCTCTGGATGCCAATTGAATCTCTGTTAGAGGCATCTCAAAAGATTCATGGGAAGTAAAATTATCTACCTTTTCTCTGTACCCGTATTCATCAAATCCAAGAAATATAAAGAGTAACTTAGTCATCCCAAAAGCAGTAGTATTTCCAGGGCTGCACTAGTGCCCTCTGATAAACTTCAGGAGAAAGAGAAGTTCCGTTTGATCTTCTCTCCACAACCTCAGCAATAATTCCACAATAGGCTGAGCACACTGCAGGTGAGAATTAGATGAGTCTCAGTATGTGAAGATCTCTGAGGCATGGGTCAGAGATCTGATATCTGAGCATATTGATATCATGGGTCTATATTTAATTCCCCTGTTCTCAGGTTCTGGCTGCTGTATACAAGGCCTTGAATGATCACCATGTCTACTTGGAAGGGACACTGCTGAAACCCAACATGGTAACAGCTGGACATTCCTGCCCGAAGAAGTACACCCCTCAGGATGTAGCCATAGCAACTGTCACTACTCTCCTGCGTACTGTTCCTGCTGCTGTGCCCGGTGATTACCAGTTTATTACTATGTATTGTGTACTATCTATGTATCAAACCATCACACTCTCAGTCTCATTGGCCATGCTCCTAAACTCATTGTTCTGGCACATAAGGATCAGGGGCTGTGATAGCTGCAGCACTCAGCGTCTTCCCTTTCTTATTGCAGGTATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACCTAAATGCCATGAAT\n>Buteo\nAAAAAGGCATTGTGGTGGGAATAAAGGTGAGTATCTGCAGATGTCTGGATGGCAGCATAATCTAAAACCCATTACCAGTGAAAATTATATATGGGGCTGCACTCTCTCCTGCCAAACACCTTTTTTCTTTTTTGTGCTTGGTTTTAAAATAACTAGAGGATCTCTGCCACCATTCTCTGCATTGCTTTTGTACAACTAACCAGGAGCACATTTGCATTTAGTGCAGGAACTTTGCATTCACCAACTCGCACCTACTCACCGTTTGCTGCAATTAAATCCCTCCATGCAGTAACCTAAATCCAGTCCTTTCTGCATCTGATAGAGCTCTCGAGCCATTCCCTATGGCCATCTACACATTGTCCCTTCCTCTTGACCAATTCACTCCTCTGCCTCCCCTTTGCTCCAACATTTCCCTCGTTTGCACCCTTAGCATGTTCAGCACCATGCTTCACTCACAGTCAGCCTGCAGCGACAGACTAGCCATGGGTAAGAAGGCTGATCTCTATCTTTCTGTAACCCTTCCTGTTTTCCTCATCTCCACAGTTGGATAAAGGCACAGCACCCCTAGCAGGAACAAATGGAGAAACCACCATCCAAGGTAAGGAGAGATCTAAGGAGCCTAAGTTATGACTGGTGGAACAAAAGCCATGGGGTGGCTACCCTGAGTCGCAGCCTGGGCTGGTGTCATGGTACTTTCAGAGCTATATCCTAAAGAACTGCTCTCAGTGAAGCACTGTTCTATCATCTGCAGGGCTGGATGGATTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGCTGACTTTGGCAAGTGGCGTGCAGTGCTGAAGATCACTAGCACAACACCCTCTCAACTTGCCATCCAAGAGAATGCCAACACATTGGCACGCTATGCCAGCATCTGCCAGCAGGTATCTACCTTTCCTGAGATGCTGTTGCCCCTTCTCACTGTTCTCTGTGATAACATGATAGGTAACTTGAAAGGCAGATCTCTGTGAGGCTTTTGGGAAAGATGAGGTAGAAGGGCAGTGCAGCAAGAACGAATACCACCAGTCAGGGTAGACAAGAACAGTTTTTCTTCCACATCCCTAGTGACTTCCCTGTTTTTCTTTCCTTAGCATGGCTTGGTGCCCATTGTGGAGCCGGAAATCTTGCCTGATGGAGACCATGATCTCCAACGCTGTCAGTATGTCACAGAAAAGGTAAGAGATTCCTGCCCCTCTCCTCCCCTTCACAGATCAGTAGCTGATCTTATTCAGTTTGTACTCACACATCTCAAGGAGTTTTGACCAAAAAGGTACTTCGTAACTGCATCACAAAAATGAGTTGCTCACAGTTAATAGTGAATGCGAGAGTAGAATCCATGCTTTTGGATTTCCACTCGAACCACCTATATAAGCATTCTCAATCTCAAAAAGATGCACAGGGACCAAACCCACTGACCACTCTTTCAGTACCTCAGCTTGCAGGGACAAGTTCAGTAAATATGAAGAGTGGTATCCTGGTCATCTCAAAAGCAGTGGTGTCTCCAGGGCTGCAACCCCTGTGATAAATTTCATGAGAAAGCAAAATTCAATTTGATCTTCTCACACTCCCAAGGAATGAGCTGTCTTTCCACAGAAGGTTGAAGTGAAGATTTGAGCAGAGATCTACATTCGCTCCTCCTGTTTTCAGGTTCTTGCTGCTGTCTACAAGGCCCTGAATGATCATCATGTCTACCTGGAAGGGACACTGCTGAAACCCAACATGGTGACAGCTGGGCACTCCTGCCCCAAGAAGTACACCCCTCAGGATGTAGCCATAGCAACTGTCACTACTCTTCTCCGCACCGTTCCTGCTGCCGTTCCCGGTGACTCCCAGTTCATTCCTATGTATCCATTCACACTGTCACTCTTGCTGGCCTTGCTCCTACATCTGACATGCTCACTCCTCTGGCACATAAAGGTCAGGGATTGCGGTGGCTGAAGCACTTAAGCCTCGAAACCTTTTTCTTGCAGGAATCTGCTTCCTGTCTGGAGGTCAGAGTGAAGAGGAGGCTTCTGTCAACCTGAATGCCATGAAT\n>Ciconia\nAAAAAGGCATTGTGGTGGGAATAAAAGTGAGTATCTGTACACGTGTGGCAGGCAGCATACTCCAAACCCCGTTTCCAGTGAAAATTATATATGGGGCTGCACTCTCTCCTGCCAAACACTTTTTTTTCTTTTTTTGTGCTTGATTTTAAAATCCCTAGAGGATCTCTGCCACCATTCTATGCATTGCTTTTGTACAACTAACCAGGGGCACATTTGCATTTGATGTAGGAACTTTTCATTCACCAACTCCCATCTACTCACCATTCACTGCAATTAAATCCCTCCATGCAGTAACCTAAATCCAGTCCTTTCAGCATCTGACAGAGCTCTTGAACCATTCCCTGCAGCCTTCTACACATTGCCCCTTCCTCTTACCCAGTTCACTCCTTTTCTTCCCCTTTGCTCCAGCGTTTCCCTCCTTTGCACCCTTAGTGTGTTCAGCCCCATACGTTACTCACAATCAGCCTGCAAAGACAGACTAGCCATGGGTAAGAAGATAAGGATGACACTGATCTCCATCTCTCTGTAACCGTTCCTGTTTTTCGGGTCTCCACAGCTGGATAAAGGCACAGCACCCCTAGCAGGAACAAATGGAGAAACCACCATTCAAGGTAAGGAGAGATCTAAGGAACCTAAGCTATGACTGGTGCAGCAAAAGCCAAGGGGTGACTCGCCTGAGTCACAGCCTTGGCTGGTGTCACGGTACTTTTCAGAGCTATGTCCTGAAGAACTGCTCTCAGTGAAGCACTGTTCTTTCATCTGCAGGGCTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGACGGTGCTGACTTTGGCAAGTGGCGTGCAGTGCTAAAGATCACCAGCACAACACCCTCTCAACTCGCCATCCAAGAGAATGCCAACACATTGGCACGCTATGCCAGCATCTGCCAGCAGGTATCTACCCTCCAGCAACCCTTCCCGAGATGCTGTTGCCCGTTCTGACTGCTCCCTGTGATAACATGCTAGGTAACTTGAAAGGCGGATCTCTGCGAGGGTTTTGGGAAAGATGAGGAAGAAGGGCAGCGCAGCAAGAAGGAATACCAACAAAGTCAGGGTAGACAACAAGGACTGGTTTTCTTCCACGCTCTCCAAAACTTCCCTGTTTTTCTTTCCTTAGCATGGCTTGGTGCCCATTGTGGAACCAGAAATCTTGCCTGATGGAGACCATGATCTCCAGCGCTGTCAGTATGTCACAGAAAAGGTAAGAGATTCCTGCCCCCGTCCTCCCCTTCACAAATCAGTCGCTAATCTTATGCAGAGTTTGTGTTCACAGATCTCAGAGAGTTTTGACCAAAAATGTACTTCATAACTGCATCACAAAAATGAGTTGCTCATGGTCAAATAATGAATTAACAGCCAATGTGAGAGTAGAATCCATGCTTTTGGATTTCCACTCAAACTGCCAATATAAGCATTCTCAATCTCAAAAAGATGGATTGGGAGCAAAACCACTTACCCCTCTTTCAGTGCCTCAGTTTGCAGGGACAAATCCAGTAAATAGGAAGAGGGGTATCCTGGTCATCTCAAAAGCAGTGGTGTCTCCAGGGCTGCAACCCCTGGGATAAATTTCACAAGTTCAATTTGATCTTCTTACACTCCCAAGCAATAAGCTGTCTTTCCACAGCAGGTTGAGGTGAAGATTTCAGCAGAGGTCTGTATTCAATCCTTCTCTTTTCAGGTTCTGGCTGCTGTCTACAAGGCCTTGAATGATCATCATGTCTACCTGGAAGGCACACTGCTGAAACCCAACATGGTGACGGCTGGGCATTCCTGCCCCAAGAAGTACACCCCTCAGGATGTAGCCGTAGCAACTGTCACTACTCTTCTCCGTACCGTTCCTGCTGCTGTTCCCGGTGATTCCCAATTCATTCCTATGTATCCATTCACACTGTCACTCTTGCTGGCCTTGCTCCTACATCTAACACGCTCACTCCTCTGGCACGTAAAGGTCAGGGATTGCGGTGGCTGGAGCACTCTCTGAACCTCAAAACCTCTTTCTTGCAGGAATCTGCTTCCTGTCTGGAGGTCAGAGTGAAGAGGAGGCTTCTGTCAACCTGAATGCCATGAAT\n>Nothoprocta\nAAAAAGGCATTGTGGTGGGAATAAAGGTGGGTATCTGTATTTATCTAGTTGTCATAATATTCTAAGCCCTATTTCCAATGAGAACTGTAATACAGGGGCTGCACTCTTCGCTGCAAAATATTTTTCCTTGTTTTTTAGAAAGCGTTGAGATCTCTGTCCTCATTCTCTGTACAGCTTTTGAAAAAAAATAAGCAGGACACATTTGTACATGATCCAGCACCTTTTCATCCAACACTACTTCCTTGGAGCAAATGTTGCAACATTCACTGATACCAAACCTCTCATCTCAGTACACAAATTAAAATCCTTTCAGAGGCTGACAGAACTCTTGAGCTGTTCACTTCAGTCATCTGTGTATTGCTCAGTCGTATTTCCCAGTGAACTCCTTTCTTCCCCTTCAGCACATTTCAGCTATCTCTCCTTAGCCTGTTCAGTCCCGTACTTTACTTATAGTTTGTCTGCAAAGACAGAATAGCCATGGGTCACAAGATAAGTAACAGACTGATCTCTATCTATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCCCTAGCAGGAACAAATGGAGAAACCACCATACAAGGCAAGGAAAGATCTAAGTATGATTATGATTGACAAAGTGAAAGCCATCAGATGACCACAGCCTAAGCTGGTGTCATGATACTTCTAGGACTGTGCTGAGAACACAAAGTTGAGGCCTACCTATAAGGAACTGCTTTCAGTGAAGCACTGTTCTTTCATCTGCAGGGCTGGATGGACTAGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGGGCTGACTTTGGCAAGTGGCGGGCAGTGCTGAAGATTACCAGCACAACTCCCTCTCAGCTTGCTATCCAGGAGAATGCTAACACACTTGCACGCTATGCCAGCATCTGCCAGCAGGTATCTACCCTCCACTAGTCTTTCTTGAGATGCTGTTACTAGTTCTTAACTATTTCCTGTGATAGCAACTACATCTCCGTAAGCAGTTTAAAAAACAACAACAAAAAAGCAGCTAGACTGCAACTAGCATACTATAATTGCTGGGGGTGTCGGCAAAGATTTTTCTTTTTTTCTTTCCTTAGCATGGGTTGGTGCCCATTGTAGAACCAGAAATCTTGCCTGATGGAGACCATGATCTCCAGCGTTGTCAGTACGTGACAGAAAAGGTAAGTTACCCATGCTATGTGCCTCATCAAAAATCAGTGATTAGTGCAGAGTTTACATTCACAGATAATCAGGGGAGTTTAACCAAGAAAATACTTGGTAACTTTATCACAGAAATGAGATGCTCATATATGATGATTTATTGGAAAACAAGAGACCAGAATCTAGTCTCTTGTCTTTTACATGCCAAATTGAATATCTGTTAGAAGCATCTCACAAAGATTCATGGGGAGTAAAATTGCCTGTTCTTCTGTAACCCTGTTCACAAATCCGAGAAAGATAAAGAGTACCTTAGTCATTCCCAAAGCAGTAGTATCTCCAAGGCTGTAGTAGTGACCCCAGTGACAAACTTCATGAGAAAAAAAAGCTCAATTTCATACTCTCCATACTTTTCTCCATACCGTCAAGAAATAAGCTATTTTTCCACAATAGGCTGAGCACACTGCAGGTGAGAATTAGATGAGTCTCAGTATGGAAAATCTCCGAGGTATGAGTCAGAGATCTGAAATTTGAGCATACTGAGATCATGGGTCTATATTTAATCCTCTTGTTCTCAGGTTCTGGCTGCAGTCTACAAGGCCTTGAATGATCATCATGTCTACTTGGAAGGAACACTGCTGAAACCCAACATGGTGACAGCTGGGCATTCCTGCCCCAAGAAGTATACCCCTCAGGATGTTGCCGTAGCAACTGTCACTACTCTCCTGCGTACTGTTCCTGCGGCTGTGCCTGGTGATTCCTAATTTATTACTATGTACCCATTACTTTGTGTCAAACCATCACACTGTCACTGTCACTGGCCTTGCTCCTAAACTCATTGCTCTGGCAGATAAAAGTCAGTGGCAATGGTGGCTGCAGCACTCAGCTTCTTCCCTTCCTTACTGCAGGAATCTGCTTCCTGTCTGGAGGTCAAAACGAAGAGGAGGA\n>Tinamus\nAAAAAGGCATTGTGGTGGGAATAAAGGTGGGTATCTATATGTGTCTGGCTGTCACAATTCTCGAAGCCCTGTTTCCAATGAGAATTATAATACAGGGGCTGCACTCTTCCCTGCAAAACCTTTTTCCTTTTTTTTTTTTAATAGAGGATCTCTGTCCTCATTCTCTGTATAGCTTTTGAAGAAATAAGCAGGACAGATTTGTACATTTATATATGATCCAGAACCTTTTCATCCAGCACTACTTCCTTGCAACAAATGTTATATCATTCACTAACACCAAACCTCTTCTCTCAGTACACAAATTAAAATCCTTTCAGAGATTGGCAGAACTCTTGAGCTGTTCCCTTTGTTCCCTTCAGCCACCTGCGTACGGCCAAGTCCTCTTTCTGAGTTCACTCTTTTCTTCTCCTTTGCTTCAACACATTTTGGCTATCTCCCCTTAGCTTGTTCAGTCCCATACCTTACCTATAGTTTGTCTGCAAAGACAGACCAGCCACGAGTCACAAGATAAGTAACAGACTGATCTCCATCCATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCCCTAGCAGGAACAAATGGAGAAACCACCATACAAGGCAAGGAGAGATCTAAATGTGATTATGATTGGTAAAGTGAAAGCTACCAGATGATCTGATCGCAGCCTTAGCTGGGGCCATGATAGTTTTGGTACTGTGTTGAGAACACAAAGTTGAGCCCTACCCATAAAGATTCTTTTATCTGCAGGGCTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGACGGTGCTGACTTTGGCAAGTGGCGGGCAGTGCTGAAGATTACCAGCACAACTCCGTCTCAGCTTGCTATCCAGGAGAATGCTAACACACTTGCACGCTATGCCAGCATCTGCCAGCAGGTATCTACCCTCCACTAGCCTTTATTGAGATGCTGTTACGAGTTCTCACTGTTTCCTGTGATAGCAACTATATCTCTGTAAGCAGATTAAAAAATAATAAGAAAGAGCAGCCAGACTGCAATCAGGACACTATCAGTGTTGGGTTGGGCAGTTTTGTTTCCACACCAGCAAAGATTTTTCCGTTTTCTTTCCTTAGCATGGGTTGGTGCCCATTGTAGAACCAGAAATCTTGCCTGACGGAGACCATGATCTCCAGCGTTGTCAGTATGTGACAGAAAAGGTAAGCTATCCTTGCTATGCCCCTCTTCAAAAATCACTGATTGTCTAGTGCAGAGTTTGCATTCACAAATCTTATGGGGTTTTGACCAAAAAAATACTTCGTAACTACACTGTAGAAATGAGATGTCACAAATGATGATTTAATAGAAAATAAGAGTTTTAGAAAACAAGAGAAATTTAGTCGCTTGTCATTTGGATGCCAAATCGAATCTCTGTTACAAGCATCTCACAAAGGTTAATGGGGGGTAAAAATATCTACCTCTTATTCTGTACCCATGTCCACAAATAAATCCAAGAAACATAAAGAGTATCTTAGTCATGCCAAAAGCAGTAGTATCTCCAGGGCTGCACTCGCCACCGCTGTGCTAAACTTCAAGAGAAAGGGAAGTTCAGTTTGATCTTCTCTCCGCTCCCTCAAGCAATAAGCTGTCTTTTCACAATAGGCTGAGCACACTGCATGTGAGAATTAGGTGAGTCTCAGTATGTCAAGACCTCAGAGGCATGGGTGAGGAATGTGAAATCTCAGCATACTGTGATCATGGGTCTATATTAATCCTCCTGTTCTCAGGTTCTGGCTGCTGTCTACAAGGCCTTGAATGATCACCATGTCTACTTGGAAGGGACACTGCTGAAACCGAACATGGTGACAGCTGGGCATTCCTGTCCCAAGAAATACACACCTCAGGATGTAGCTGTAGCAACTGTCACTACTCTCCTGCGTACTGTTCCTGCTGCTGTGCCTGGTGATTCCCAATTTATTTCTATGTACCCATTACTATGTATCACACTGTCATTCTCACTGGCCTTGCTCCTGAACTCATTGCTCTAGCACATAAGGGTCAGGGGCTATGGTGGCTGCAGCACTCAGCTTCTTTTCTTCCGTATTGCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACTTAAATGCCATGAAT\n>Struthio\nAAAAAGGCATTGTGGTCGGAATAAAGGTGAGCGTCTGTACATGCCTAGCTGGCACAATACTCTAAACCCTATTCCCAATGAGAACTGTAATACAGGGGCTGCCCTCTCCCTTGCAAACCAGTTTTTTGTTTGTTTCTGACCCTAGAGGATCTCTGCCCCCATTGTCTGTGCGGCTTTCGTACAAATAACCAGGATACATTTGTGCATTTACATATGATCCAGGACCTTTTCATCTAGCAATACCCCTCTACTTCCTTGCAATAACTGTTGCACCATTCACTAAAATTAAAGCCTTCCTCTCAGTATACAGACTAAAAACCTTTCTGAGTCTGAGAGAGCTCTTGAGCTGTTCCCTGCAGCCACCCGCAAATTGCCCAGTCCTCTTACCTGACTCACTCCTTTCTTCCCCTTTTCTCCAAAACTCCCCCCAACACCACATCTTCCCTTAGCCTATACTTTACCTACAGTTTGTCGGCAAAGACAGACTAGCTATGGATCACAAGATAAGTAACAGACTGATCTCCATCTATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACCACCATACAAGGCAAGGAGAGATCTAAGTAGCCATACTTAAGATTGGTAAAGCGAAAGCCATCAGATCACTCAAGCGGTTTTGCAGCCTTGGCTGGCATCATAATACTTTTCAGGGCTACGTTGAGACCACAAAGTTCAGCCCTACTCCAAAAAAACTGCTCTCAGTGAAGCATTGTTCTTTCATCTGTAGGGCTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAAAAAGACGGTGTTGACTTTGGCAAATGGCGCGCGGTGCTGAAGATCACCAGCACAACTCCCTCTCAGCTCGCCATCCAGGAGAATGCTAACACACTAGCACGCTATGCCAGCATCTGCCAGCAGGTATCTGCCCTCCACTAATCTTTCTTGAGATGTTGTTACCCTTTATCTCTGCTCCTGTGATAACAGCTAGATATCTTGAAAGACTGCTTACTGTGACGGGTTTCAAAAACGATGAGGAAGAGGGGCTGTACAGCAAGAAGGAATACTATCAATGAAGGGGATAGACAGCAATGACAGGTTTTTTTTTTTTTTTCCACATCTGCAAAGACTTTCCTGGTTTTCTTTCCTTAGCACGGATTGGTGCCCATTGTGGAACCAGAAATCTTGCCTGATGGAGACCACGATCTCCAGCGCTGTCAGTATGTCACAGAAAAGGTAAGAGATCCTCACCTCTTCAAAAATCAGTGGTTAACCTTGTGCAGAGTTTGCATTCCTAGATTTCAGGGAGTTTTGAACAAGAAAGTACTTCATGACTGTGCCACAGAAATGAGTTACTCACATATAATGATTTAATAGCAAACTTGAGACTAGAATCCATGCGTTTGGATGTCCATTCAAACTTCCGTTAGAAGCATTCTCCATCGCAGAAGGATTCACTGGGGGTAAAAGTATGTACCTCTCTTTTGGTGTCCCTGTGAACAGGGACAAATCCAATAAACATAAAGAGTAGTATCTTAGTCATTCCGATAGCAGACTGTCTCTCAGGTTGCATTACTGACCCCCGTGATAAAGGTCAAGAGAAAGGGAAGTTCAGTTTTATCTTCATTCCACAACAGACTGAGGACACTGTTGAAGAATCTGTGGGTGTGAATTAGATGGGTCTCAGCGTGTGAAGATCTGAGCATAGGTCTGCATTTCATCCTTCTGTTCTCAGGTTCTGGCTGCTGTCTACAAGGCTTTGAATGATCATCACGTCTACTTGGAAGGGACACTGCTGAAACCCAATATGGTGACGGCTGGGCATTCCTGCCCCAAGAAGTACACCCCTCAAGATGTAGCCATAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTCCCTGGTGATTCCCAGTTTATTACTATGTATCCATTACTATGTCTCAGTCCTTCACATTGTCACTCTCACTGGCCTTGCTCCTACGTATGATACCCTCACTCATCTGGCACACGAGGGTCAGAGACTGTGGTGGCTGCAGCACTCAGCTTCTAAGCCTTATTTTCCCCTCACTGTAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACCTGAATGCCATGAAC\n>Rhea\nAAAAAGGCATTGTGGTGGGAATAAAGGTGAGTGTCTGTACATGTGTCTGGCTGGCACAATACTCTAAACACTATTTCCAATAAGAACTATAATATAGGGGCTACACTCTCCCTTGTAGACCAGTATTTTGCTTGTTTCTGAAAATACCTAGAGGATCTCTGCCCCCATTCTCTGTATAGTTTTTGTACAAATATCCAGGACACATTTGCGCATTTACATAGAATCCAGGACCTTTTCATCCAGCAAAGGATGTACTTCCTTGTACAAATGTTACATCACACACTGAAATTAAACCTCTTCTCTCAGTACACAAACTAAAATCCTTTCTGAGTCTGACAGAACTCTTGAGCTGTTCCCTGCAGCCACCTGCATATTATCTGATCCTCTTACCCAGTTCACTCCTTTCTTTCTCCTTTTCTTTAACACTTCTCAGATATGTCCCTTTAGCCTATTAAGTCCAATACTTTACCCACGGTTTGTTTGCAAAGACAGACTAGTCATAGATCACAAGATAAGTAACAGATTGATCTCCATGTATTTTTCCTGTCTCCACAGTTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACTACCATACAAGGCAAGGAGAGATCTAAGTAGCCATAATTATGATTGGTAAAGTGAAAGCCATCAGATGACTAAACTCGTTCACAGGCCTTAGCTGGTGTCATGTTACATTTCATGGTGAAAGCACTAAGTTCAGCCTTCTCATAAAGAACTGCTGTCWGTGAAGCACTGTTCTTTCATCTGCAGGACTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGTTGACTTTGGCAAATGGCGTGCAGTGCTGAAGATAACCAGCACAACTCCCTCTCAACTTGCTATCCAGGAGAATGCTAACACACTAGCACGCTACGCCAGCATCTGCCAGCAGGTATCTACCCTCTATTAATCTTTCCTGAGATGCTGTTACTGTTTCTTACTGTTTTCTGTAATAACAGCTATTTTGAAAGATCAGTCCCTGTGAGAGGTTTCAGAGACMATGAAGAAGAAGAGCCATACAGYAAGGAGGAATACTATCAATGTTGGGGTAGACAGCAAGGACAGTTTTTCTGCCACATCTGCAAAGACTTTCCTGTTTTTCTTTCCTTAGCATGGATTGGTGCCCATTGTGGAGCCACAAATCTTGCCTGATGGAGATCACGATCTCCAACGTTGTCAGTATGTCACAGAAAAGGTAAGAGAACCTTTCCATATCCATCTTCACAAATCAGTGGTTAATCTTGTGCAGAGTTTGCACTCACAGATCTCAGGGACTTTTGACCAAGAAAGTTCTTCATAATTGCACTACAGAAATGAGTTAGTCACAAAAGATGATTTAATAGCAAATGTGAGACTAGGATCTTTGCTTCTTGATGTCCATTCAAACGTCTCTTAGAAGCATTCTCCATCTCAGAAATATTCACTGGGAGTAAAAGAATCTACCTCTCTTTTGGTATCCCTTTTCACAGGGACAAATCCAATAAACATGAAGAGTGGTATCCTAGTCATTCCAAAAGCAGTGGTGTCTCCAGGGTTGCATTACTGACCCCATGATGAACTTCAAGAGAAATGGAAGTTAGTTTGATCTTCTTTCTATGCTCTCAAGCAATAAGCTCTCTTTCCACAACAGGTTGAGCACACTGTTGAAGAATCTGTGGGTGAGAATTAGACGAATCTCAGTATGTGAAGATCTCAGCATGGGGTCTGTATTTAATCCTCTTGTTCTCAGGTTCTGGCTGCTGTCTACAAGGCTTTGAATGATCATCATGTCTACTTGGAAGGGACACTGCTGAAACCCAATATGGTGACGGCTGGGCATTCCTGCCCCAAGAAGTACACCCCTCAGGATGTAGCCATAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTCCCTGGTAATTCCCAATTTATTATTATGTATCCACTACTATGTATTCACATTGTCACTTTCACTAGCCTTGCTTCTACCTGTGATACACTCAATTCTTTGGCACATAAGGGTCAGGGAGTGTGGTGCCTGCAGCACTCAGCTTCTTCCTCTCCTTATTGCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACCTAAATGCCATGAAT\n>Apteryx\nAAAAAGGCATTGTGGTTGGAATAAAGGTGAGTGTTTGTACATGTCTGGCTGGTGCTCTAAACCCTATTTCCAAWGAGAACTATAATGTAGGGGCTGCACTCTCCCTTGCAAAACAGTTTTTTGCTTGTTTTTGAAATACCTAGAGGATCTCTGCCCCCATTCTCTGTACAGCTCCTGTACAGATAACCAAGACACATTTGTGTATTTACATATGACCTGGGACCTTTTCATCCAGCACTACTTCCTTGCAACAAATGTTGCATCATTCACTGAAATTAAACCCCTTCTCTCAGTACACAAACTAAAATCCTTTCTGAGGCTGACAGACCTCTTGAGCTGTTCCCTGCAGCCACCTGCATATTGCCTGATCCTCTTATCCAGCTCACTCCTTTTCTTCCCCTTTGCTCCAACACTTCTCCTCTATCTCCCCTTAGCCTATTCAGTCCCATACTTTACCCACAGTTTGTCTGCAAAGACAGACTAGCCATGGGTCACAAGATAAGTAACAGATTGATCTCCATCTATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACCACCATACAAGGCAAGGAGAGACCTAAGTAGCCATAATTATGATTGGTAAAGTGAAAGCCATCAGATGACTAAASTGGTTTGCAGCCTTAGCTGCTGTTATGATACTTTTCAGGACTATGTTGAGAACACAAAGTTCAGCCCTACCCATAAAGAACTGCTCTCAGTGAAGCACTGTTCTTTCATCTGCAGGGCTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGCTGACTTTGGCAAATGGCGTGCAGTGCTGAAGATCACCAGCACAACTCCCTCTCAACTCGCTATCCAGGAGAATGCTAATGCACTAGCACGCTATGCCAGCATCTGCCAACAGGTATCTACCCTCCACTAATCTTTCTTGAGATGCTGCTATCCTTTCTCACTGTTTCCTGTGATAACAGCCAGATATCTTGAAAGACCGATCTCTGTGAGGGGTTTCAAAAACAATGAGGAAGAGGGGCCATACAGCAAGAAGGAATACTATCAATGTTGGGGTAGACAGCAAGGACAGTTTTTCTTCCACACCTGCAAAGACTTTCCTGTTTTTCTTTCCTTAGCATGGGTTGGTGCCCATTGTGGAGCCAGAAATCTTGCCTGATGGAGACCATGATCTCCAACGTTGTCAGTATGTCACAGAAAAGGTAAGAGAGATCCTTGCCATGCCCCTCTTCAAAAATCAGTGGTTAATCTTGTGCAGAGTTTGCATTCACGGATGTCAGGGAGTTTTGACCAAGAAAGTACTTCATAATTGCGCCACAGAAATGAGCTGCTCACAAATGATGATTTAACAGCAAACGTGAGACTAAGATCCGTGCTTTTGGATATCCATTCAAACCTCCGTTAGAAGCATTTTCCACCTCTGAAAGATTCACTGGGAGTAAAAGTATCTACCTCTCTTTTGGTACCCCTGTTCACAGGGACAAATCCAATAAACATAAAGAGTGGTATCTTAGTCATCCCAAAAGCAGTGGTGCCTCCAGGGTTGCATGACCGACCCCTGTGATAAACTTCAAGAGAAGGGGAAGTTCAGTTTGATCTTCTTTCCACACTCTCAAGCATTAAGCTGCCTTTCCACAACAGGCTGAGCATGCTGTTGAAGATCTGTGGGTGTGAATTAGATGGGTCTCAGTATGTGAAAATCTCAGGAAGAGTCTGTATTTAATCCTCCTGTTCTCAGGTTCTGGCTGCTGTCTACAAGGCCTTGAATGATCATCATGTCTACTTGGAAGGGACACTGCTGAAACCCAATATGGTGACGGCTGGACACTCCTGCCCCAAGAAGTACACCCCTCAGGATGTAGCCATAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCAGCTGTCCCTGGTGATTCCCAATTTATTACTATGTATCCATTACCATGTATCAATCCTTCACATTGTCACTCTCACTGGCCTTGCTCCTACATACGATACACTCACTTCTCTGGCACGTAAGGGTCAGGGACTGTGGTGGCTGCAGCACTCAGCTTCTTCCCTCCTTATTGCAGGAATCTGCTTCCTGTCTGGAGGCCAAAGTGAAGAGGAGGCTTCTCTCAACCTAAATGCCATGAAT\n>Dromaius\nAAAAAGGCATTGTGGTGGGAATAAAGGTGAGTGTCTGTACATGTCTGGCTGGCACAATACTCTAAACCCTATTTCCAACGAAAACTATAACATAGGGGCTGCACTCTCCCTTGCAAACCAGTTTTTTGCTTGTTTCTGAAATACCTAGAGGATTTCCGCCCCCGTTCTTTGTATGGCTTTTGTACAAATAACCAGGACACATTTGTGCATTTACATACGATCTGGGACCTTTTCATCCAGCACTACTTCCCTGCAACAAATGCTGCATCATTCACTGAAATTAAACCTCTTCTCTCAGTACACAAACTAAAATCCTTTCTGAGGCTGACAGAACTCTTGAGCTGTTCCCTGCAACCCCCTGTGTATTGCCTGATCCTCTTACCCAGTTCACTCCTTTTCTTCCCCTTTGCTCCAACACTTCTCCCCTATCTCCCCTTAGTCTATTCAGTCCCATACTTTACCACAGTTTGTCTGCAAAGACAGACTAGCCATGGGTCACAAGATAAGTAACAGACTGACATCCATCTATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACCACCATACAAGGCAAGGAGAGATCTAAGTAGCCATAATTATGACTGGTAAAGTGAAAGCCATCAGATGACTAAAGGGGTTTGCAGCCTTAGCTGGTGTCATGATACTTTTCAGTACTATGTTGAGAACACCAAGTTCAGCCCTACCCATGAAGGACTGCTCTCAGTGAAGCACTGTTCTTTCATCTGCAGGGCTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGTTGACTTTGGCAAATGGCGTGCGGTGCTGAAGATCACCAGCACAACTCCCTCTCAACTCGCTATCCAGGAGAATGCTAAYGCACTAGCACGCTACGCCAGCATCTGCCAGCAGGTACCTACCCTCCACTAATCTTTCTTGAGATGCTGTTACCCTTTCTCATTGTTTCCCATGATAACAGCGAGGTATCTTGAAAGACCGATCTCTGCGAGGGGTTTCAAAAACAATGAGAAAGGGGGACCATACAGCAAGACGGAATACCATCAGTGTTGAGGGAGACAGCAAAGACAGTTTTTCCTCCATACCTGCAAAGACTTTCCTGTTTTTCTTTCCTTAGCACGGGTTGGTGCCCATTGTGGAGCCAGAAATCTTGCCTGATGGAGACCATGATCTCCAACATTGTCAGTATGTCACAGAAAAGGTAAGAGATCTTTGCCATGCCCTTCTTCAAAAATCAGTGGTTAATCTTTTGCAGAGTTTGCATTCACAGATCTCAGGGAGTTTTGACCAAGAAAGTACTTCATAACTGCGCCAGAGAAATCAGCTGCTCRCAAGTGATGATTTAATAGCAAATGTGAGACTAGGATCCTTGCTTTTGGATGTCCATTCAAACCTCTGTTAGAAGCATTCTCCATCTCAGAAAGATTCACTGGGGGTAAAAGTATCTATCTCTCTTTCAGTACTCCTGTTCACAGGGACAAATCCAATAAACATAAAGAGTGGTGTATTAGTCATCGCAAAAGCAGTGGTGTCTCCAGGGTTGCATTACTGACTCCTGTGATAAACTTCAAGAGAAAGTGAAGTTCAGTTTGATCTTCTTTCCACACTCTCAAGCAATAAGCTGTCTTTCCACAATAGGCTGAGCACACTGTTGAAGAATCTGTGGGTGTGAATTAGATGGGTCTTAGTATGTGAAGATCTCAGCATGGGTCTGTATTTAATCCTCCTGTTCTCAGGTTCTGGCTGCTGTCTACAAGGCCTTGAATGATCATCATGTCTACTTGGAAGGGACACTGCTGAAACCCAATATGGTGACGGCTGGGCATTCCTGCCCCAAGAAGTACACCCCTCAGGATGTAGCCATAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTCCCTGGTGATTCCCAATTTATTACTATCTATCCATTACTATGTACCAATCTTTCACATTGTCACTCTCACTGGCCTTGCTCCCACATATGATACACTCACTTCTCTGGCACATAAGGGTCAGGGACTGTGGTGAGTGCAGCACTCAGCTTCTTCCCCTCTTTATTGCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACCTAAATGCCATGAAT\n>Casuarius\nAAAAAGGCATTGTGGTGGGAATAAAGGTGAGTGTCTGTACATGTCTGGCTGGCACAATACTCTAAACCCTRTTTCCAAGGAGAACTATAATATAGGGGCTGCACTCTCCCTTGCAAACCAGTTTTTTGCTTGTTTCTGAAATACCTAGAGGATTTCTGCCCCCGTTCTTTGTACGGCTTTTGTACAAATAAGCAGGACACATTTGTGCATTTACATATGATCTGGGACCTTTTCACCCAGCACTACTTCCCTGCAACAAATGCTGCATCATTCACTGAAATTAAACCTCTTCTCTCAGTACACAAACTAAAATCCTTTCTGAGGCTGACAGAACTCTTGACCTGTTCCCTGCAACCCCCTGTGTATTGCCTGATCCTCTTACCCAGTTCATTCCTTTTCTTCCCCTTTGCTCCAACACTTCTCCCCTATCTCCCCTTAGCCTATTCAGTCCCATACTTTACCCACAGTTTGTCTGCAAAAACAGACTAGCCATGGGTCACAAGATAAGTAACAGACTGATATCCATCTATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACCACCATACAAGGCAAGGAGAGATCTAAGTAGCCATAATTATGACTGGTAAAGTGAAAGCCATCAGATGACTAAAGGGGTTTGCAGCCTTAGCTGGTGTCATGATACTTTTCAGTACTATGTTGAGAACACAAAGTTCAGCCCTACCCATGAAGGACTGCTCTCAGTGAAGCACTGTTCTTTCATCTGCAGGGCTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGTTGACTTTGGCAAATGGCGTGCGGTGCTGAAGATCACCAGCACAACTCCCTCTCAACTCGCTATCCAGGAGAATGCTAACGCACTAGCACGCTACGCCAGCATCTGCCAGCAGGTACCTATCCTCCACTAATCTTTCTTGAGATGCTGTTACCCTTTCTCATTGTTTCCCATGGTAACAGCTAGATATCTTGAAAGACCGATCTCTGCAAGGGGTTTCAAAAACAATGAGAAAGAGGGACCATACAGCAAGAAGGAATACTATCAATGTTGAGGGAGACAGCAAAGACAGTTTTTCTTCCATACCTGCAAAGACTTTCCTGTTTTTCTTTCCTTAGCACGGGTTGGTGCCCATTGTGGAGCCAGAAATCTTGCCTGATGGAGACCATGATCTCCAACATTGTCAGTATGTCACAGAAAAGGTAAGAGATCTTTGCCATGCCCTTCTTCAAAAATCAGTGGTTAATCTTTCGCAGAGTTTGCATTCACAGATCTCAGGGAGTTTTGACCAAGAAAGTACTTCCTAACTGCACCAGAGAAATCAGTTGCTCACAAGTGATGATTTAATAGCAAATGTGAGACTAGGATCCTTGCTTTTGGATGTCCATTCAAACCTCCATTAGAAGCATTCTCCATCTCAGAAAGATTCACTGGGGGTAAAAGTATCTATCTCTCTTTCAGTACTCCTGTTCACAGGGACAAATCCAATAAACATAAAGAGTGGTATATTAGTCATCGCAAAAGCAGTGGTGTCTCCAGGGTTGCATTACTGACTCCTGTGATAAACTTCAAGAGAAAGGGAAGTTCAGTTTGATCTTCTTGCCACACTCTCAAGCAATAAGCTGTCTTTCCACAACAGGCTGAGCACACTGTTCAAGAATCTCTGGGTGTGAATTAGATGGGTCTTAGTATGTGAAGATCTTAGCATGGGTCTGTATTTAATCCTCCTGTTCTCAGGTTCTGGCTGCTGTCTACAAGGCCTTGAATGATCATCATGTCTACTTGGAAGGGACACTGCTGAAACCCAATATGGTGACGGCTGGGCATTCCTGCCCCAAGAAGTACACCCCTCAGGATGTAGCCATAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTCCCAGGTGATTCCCAATTTATTACTATCTATCCATTACTATGTACCAATCTTTCACATTGTCACTCTCACTGGCCTTGCTCCCACATATGATACACTCACTTCTCTGGCACATAAGGGTCAGGGACTGTGGTGAGTGCAGCACTCAGCTTCTTCCCCTTTTTATTGCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACCTAAATGCCATGAAT\n>Smithornis\nAAAGGTGAGTATCTGTATTTGCCTGGCTGGCAGCATAATCCAAACTCCATTTTTCCAGAGAAAATTTATATGAGCCTGAAAAAACACTTTTTTGTTTGGTTTTTTTGTGCTTGGTTTTAAAATCACTAGAGGATATCTGCCACCATTTTCTGCATATTGCTTTTGGGCAACTAACCAGAGGCACATTTGCATTAAATGCAGGAACTAGCACAGATTTGGGAGTGTTGGTGGATAGGAAACTCAACATGAGCCAGCAGTGTGCCCAGGTGGCCAAGAAGGCCAATGGCATCCTGGCCTGCATCAGGAATGGTGTGCCCAGGGAGGTGGTGGAATCACCGTCCCTGGAGGTGTTTAAGAGTAGGCTGGATGAGGCACTGAGTGACATGGTTTAGATGATGGGATGGTGCTAGGTAATAGGTTGGACTTGGTGATCTCAAAGGTCTTTTCCAACCTTGTTGATTCTGTGATTCTCTGATTCTGTAACTTTTTATACACAAACTTCCACCTACTCACCATTCACTGCAAATAAGTCCCTCCATGCAGTAAATTAAATCAATTTATTTTCACAGTTGACAGAGGTCTCCAGCCACTCTTTGCAGTCATCTACACACAGCCCCTTCCTCTTACCCAGTTCACTCCTTTTCTTCCCCTTTGCCCCAACATTTCCCTCCTTTGTACCCTGAGCATGTTCAGCCCCATACTTACAATCAGCCTGCAAAGACAGACTAGACATAGATAAGAAGATAATACTGATTCCCACTCTCTGTAACCCTTCCTGTTTTTCTGTTCTCCACAGCTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACCACCATCCAAGGTAAGGAGAGATCCAAGGAGCCTAAGCTACAACCTGTGCAGCAAAAGCCATAGGGTGACTAACCCGAGTCGCAGTCTTGGCTGGTGCCACGGTACTTCCCAGAGCTTTGAGCTGAAGAACTGCTCTCAGTGGAGCACTGTCCTCTCCCTGCAGGGCTGGATGGGCTGGCTGAGCGCTGTGCCCAGTACAAGAAAGACGGTGCTGACTTTGGCAAGTGGCGCGCAGTGCTCAAGATCACCAGCACAACGCCCTCTCAACTCGCCATCCAAGAGAATGCCAACACCCTGGCACGCTATGCCAGCATCTGCCAGCAGGTACCCACCCTCCAGCAACCTTTCTTGAGATGCTGCTGCTCCTTCTCACTGTTTCCTGTGATAACACACTAAAAAGGAGGATCTCCGTGAGAGTTTTGGGGAAGACAAGGAGGAAGGGCAGCACATCAAGAAGAAATATCACCAAAATCAGGGTCAATGGCAATAACAGTTTTTCTTACATAGCCCTAAAGAATTCCCTGTCTTTCTTTTCTTAGCATGGTTTGGTGCCCATCGTGGAGCCAGAAATCTTGCCTGATGGAGATCATGACCTCCAGCGCTGTCAGTATGTCACAGAAAAGGTAAGAGATTCCTCTCTCTCTCCTTCCCTTTACARATTAGCAGCTAAACTTTCTGAAGTTTGTGCTCACAGATCTCAAGGAGATTTGACCAAAAAGGTACTTCATAACTGCTTCACAAAAATGAGCTGCTCACAGGCAAATAATGAGTTAATAGCAAATGCAAGAGTACAATCCATGGTCTTGGATTTCCACTCAAACTGACAATATAAGCATTCTCAACCTCAAAAAGGTGGATCAGGAGCAAAACCAATTACTTCAATTTCAGTACCTCAGTTTGCAGTGACAAATACAGTCAATAGGAAGAGTGGTATTCTGGTCATCTTAACAGCAGTGATGTCTCCACAACGCCTCTGAGATAATTTCACACATGAAAGCAAAATTCAGTTTGATCTTGTTCCACCCCCAAAGAATAAGCTGTCTTTCCACAGGAGGCTGATGTGAATACATGACGAGAAGTCTGTATTCAATCCTCCTGTTTTCAGGTTCTGGCTGCTGTCTACAAGGCACTGAATGATCATCATGTGTACCTGGAAGGGACACTGTTGAAACCAAACATGGTGACGCCTGGACATTCCTGCTCCAGGAAGTACAGCTCTCAGGACATAGCTGTAGCCACTGTCACTACTCTCCTTCGCACCGTTCCTGCTGCTGTCCCTGGTGATTCCTGATTCCCAATTCATGGGAATTGCTGGTCCTGCTCCTGCCTCTGACATGGCTGCTCCTCTGGCATGCACAGGTCAGGGGTTGGGGTGGCTGAAGCACTCCATTTCTAAGCCTCAAATCCTTTCTTGCAGGAATCTGCTTCCTGTCTGGAGGTCAGAGCGAAGAGGAGGCTTCTGTCAACCTGAACGCCATGAAC\n>Gallus\nAAAAAGGCATGGTGGTGGGAATAAAGGTGAGTTATATCCTTCCATGCCAACAGAACTCTTGAGCCATTCCCCACAGCCAAATCCATATTGCCCTTTATATCCAATTCAATTCTGTTCTCCCCCTTTTCCTGCACTTCTTACCTTCCTTACACAAGTAGTATGTTCAGCCCCATATTTCACTCACGGACAATGTGCAAGGGTAGACCAGCTCTGGGTCACTTCTGTCATTTTTTAACCCTTTCTATTTTTGCTGTCTCTTCAGCTGGATGCAGGTACTGCACCTCTGGCAGGAACAAATGGAGAAACCACTATCCAAGGTAAGGTGAGATCTAAGAAGCCTCAGTTGTGAGTGATACATTGAAAGCCATGGTGTGACTCAACAGGAGATGAAGCCATGGCTGGTGTCATGGCACATTTCAGAGCTGTATCCTATCCTCTCAGTGAAGCACTGTTCTTTCATCTGCAGGACTTGATAAACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGCTGACTTTGGCAAGTGGCGTGCAGTGTTGAAGATCAGTAGCACAACGCCCTCTCAACTTGCCATCCAAGAGAACGCCAACACCTTGGCACGTTACGCCAGCATCTGCCAGCAGGTATCTACCCTCCAGCAAAATTTCTGGAGATTCTGTCGCCCCTTCCTTGCTGTTCCCTGTGATAACAGATGAGATATCTTGAAAGGCAGATCTCTGTGAGGATTTTGGGAAAGATGAGGATGAAGGGCAGTACAGAAGAAGAAATACCACCAAACACAATATAGACAGCAAGTAGAGTTTTTTTCTTCCACAATGATGTGTGGAAATCAGGCCCTATAGCCAGTAAGGATATAGAGCAGGTATGTGTTTATTGGTGACGCGCGTACACCCTGGTGCAAGGGGGATCGTTCCACTTAACTTGCACACCATCTGAAGAAATCGTGCTATAGATATAGGTGAAACTAATACATAATCAGTAGTTGACAAGAATTCGGATACATATTCACTAAATTTCCGAGAGCTCATTAGCATACAGTGCCTCCCCCCCTTGCACGTGCATAGTAGGTCGTGATGATGAAGGCTCGTAGTCTTCCTCGTGAAGGCTCATAGTCTTCCTCGCTGCAAACTTCTGACCCTGAAGGGGGGGCATCCCCCGAACTGGTTTCAGCTTGCACTTCAGACATCTAATCACCTCCCTGCCAAATGTTTTCGAGCTGTTCTCCGGTCCTTATCTTTATGGCCTTCATTCTCCTTGTTATTCTGGACCTAGCGCCTGTGAAAGTGCTTGGAATCCCTTGTTTTCTAATACTCTCTACATTAACTATCTCTATTTGCCCTTTATGTCTACCTTGTGAAGCTGCTTTCTCTTTTCTTGCTATGAAGCCCTTCTTTCCATACTGCAGGGACCTGATTTTGCCCTTCAACACTTACAAAGACTGCCTTGTTTTTCCTTCGTTAGAATGGCTTGGTGCCCATTGTGGAGCCAGAAGTCTTACCTGATGGTGACCATGATCTCCAACGCTGTCAGTATGTCACAGAAAAGGTAAGAGATTCCTTATTCTCTCCTCACCTTCACAAATCACTAGTTAATCTTATGCAGAGTTTATACTGCTCTCAAGGATTTTTAAACAATAAGTTCCTTCAAAACTGCACCACATGAATTCACAGTCAAATAATTAGCAAAAAGCAAACCTGCAAGTAGAATTCATGATTTTGGATTTCCATTCAAACTCTCAATATAAACATTCTTGACCTCAAAAAGATACACTGCAGATAAAGACCTTTACTCTTTATTCAGTACCTCAGTTGCAGGGAATACCCTTGCCAAAAAGAAAAGTGGTATTCTGGTATTACTAAAGTTCTCCAGGGCTCTCTTGGTCTGCACCTCCTGTAATAAATTCTAAGAGAAAGTGAAATGTGATTTGATCTTCTCACACTCCCAATGAATAAGTTGTCTTTCCACAGGAGGTTGAGGTAAAGATTTGAGCACAGATCTGTATTCACTCCTCCTTTTCAATCCTTAGGTTCTGGCTGCTGTCTACAAGGCCTTGAATGACCATCATGTCTACCTGGAAGGAACACTGCTGAAACCCAACATGGTGACAGCTGGGCATTCCTGCCCCAAGAAGTACACCCCTCAGGATGTGGCTGTAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTTCCTGGTGATTCTTGATTCATTCCTATTATAACCATTCAGTTTCACTGGACTTGCTCCTACATCTGATATGCTGACTTCTCTGTCACAGTCAGTAACTGTGGCAGCTGGAGCAACCTATTTCTAAGTCTTGAGGACTCTGTCTTTCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAATTTGAATGCCATGAAT\n' + if not check_individual_results(cm, t): + res = False + print("sort by length (>) ", end = '') + cm = "./pxssort -s TEST/unaligned.fa -b 4" + t = '>Gallus\nAAAAAGGCATGGTGGTGGGAATAAAGGTGAGTTATATCCTTCCATGCCAACAGAACTCTTGAGCCATTCCCCACAGCCAAATCCATATTGCCCTTTATATCCAATTCAATTCTGTTCTCCCCCTTTTCCTGCACTTCTTACCTTCCTTACACAAGTAGTATGTTCAGCCCCATATTTCACTCACGGACAATGTGCAAGGGTAGACCAGCTCTGGGTCACTTCTGTCATTTTTTAACCCTTTCTATTTTTGCTGTCTCTTCAGCTGGATGCAGGTACTGCACCTCTGGCAGGAACAAATGGAGAAACCACTATCCAAGGTAAGGTGAGATCTAAGAAGCCTCAGTTGTGAGTGATACATTGAAAGCCATGGTGTGACTCAACAGGAGATGAAGCCATGGCTGGTGTCATGGCACATTTCAGAGCTGTATCCTATCCTCTCAGTGAAGCACTGTTCTTTCATCTGCAGGACTTGATAAACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGCTGACTTTGGCAAGTGGCGTGCAGTGTTGAAGATCAGTAGCACAACGCCCTCTCAACTTGCCATCCAAGAGAACGCCAACACCTTGGCACGTTACGCCAGCATCTGCCAGCAGGTATCTACCCTCCAGCAAAATTTCTGGAGATTCTGTCGCCCCTTCCTTGCTGTTCCCTGTGATAACAGATGAGATATCTTGAAAGGCAGATCTCTGTGAGGATTTTGGGAAAGATGAGGATGAAGGGCAGTACAGAAGAAGAAATACCACCAAACACAATATAGACAGCAAGTAGAGTTTTTTTCTTCCACAATGATGTGTGGAAATCAGGCCCTATAGCCAGTAAGGATATAGAGCAGGTATGTGTTTATTGGTGACGCGCGTACACCCTGGTGCAAGGGGGATCGTTCCACTTAACTTGCACACCATCTGAAGAAATCGTGCTATAGATATAGGTGAAACTAATACATAATCAGTAGTTGACAAGAATTCGGATACATATTCACTAAATTTCCGAGAGCTCATTAGCATACAGTGCCTCCCCCCCTTGCACGTGCATAGTAGGTCGTGATGATGAAGGCTCGTAGTCTTCCTCGTGAAGGCTCATAGTCTTCCTCGCTGCAAACTTCTGACCCTGAAGGGGGGGCATCCCCCGAACTGGTTTCAGCTTGCACTTCAGACATCTAATCACCTCCCTGCCAAATGTTTTCGAGCTGTTCTCCGGTCCTTATCTTTATGGCCTTCATTCTCCTTGTTATTCTGGACCTAGCGCCTGTGAAAGTGCTTGGAATCCCTTGTTTTCTAATACTCTCTACATTAACTATCTCTATTTGCCCTTTATGTCTACCTTGTGAAGCTGCTTTCTCTTTTCTTGCTATGAAGCCCTTCTTTCCATACTGCAGGGACCTGATTTTGCCCTTCAACACTTACAAAGACTGCCTTGTTTTTCCTTCGTTAGAATGGCTTGGTGCCCATTGTGGAGCCAGAAGTCTTACCTGATGGTGACCATGATCTCCAACGCTGTCAGTATGTCACAGAAAAGGTAAGAGATTCCTTATTCTCTCCTCACCTTCACAAATCACTAGTTAATCTTATGCAGAGTTTATACTGCTCTCAAGGATTTTTAAACAATAAGTTCCTTCAAAACTGCACCACATGAATTCACAGTCAAATAATTAGCAAAAAGCAAACCTGCAAGTAGAATTCATGATTTTGGATTTCCATTCAAACTCTCAATATAAACATTCTTGACCTCAAAAAGATACACTGCAGATAAAGACCTTTACTCTTTATTCAGTACCTCAGTTGCAGGGAATACCCTTGCCAAAAAGAAAAGTGGTATTCTGGTATTACTAAAGTTCTCCAGGGCTCTCTTGGTCTGCACCTCCTGTAATAAATTCTAAGAGAAAGTGAAATGTGATTTGATCTTCTCACACTCCCAATGAATAAGTTGTCTTTCCACAGGAGGTTGAGGTAAAGATTTGAGCACAGATCTGTATTCACTCCTCCTTTTCAATCCTTAGGTTCTGGCTGCTGTCTACAAGGCCTTGAATGACCATCATGTCTACCTGGAAGGAACACTGCTGAAACCCAACATGGTGACAGCTGGGCATTCCTGCCCCAAGAAGTACACCCCTCAGGATGTGGCTGTAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTTCCTGGTGATTCTTGATTCATTCCTATTATAACCATTCAGTTTCACTGGACTTGCTCCTACATCTGATATGCTGACTTCTCTGTCACAGTCAGTAACTGTGGCAGCTGGAGCAACCTATTTCTAAGTCTTGAGGACTCTGTCTTTCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAATTTGAATGCCATGAAT\n>Smithornis\nAAAGGTGAGTATCTGTATTTGCCTGGCTGGCAGCATAATCCAAACTCCATTTTTCCAGAGAAAATTTATATGAGCCTGAAAAAACACTTTTTTGTTTGGTTTTTTTGTGCTTGGTTTTAAAATCACTAGAGGATATCTGCCACCATTTTCTGCATATTGCTTTTGGGCAACTAACCAGAGGCACATTTGCATTAAATGCAGGAACTAGCACAGATTTGGGAGTGTTGGTGGATAGGAAACTCAACATGAGCCAGCAGTGTGCCCAGGTGGCCAAGAAGGCCAATGGCATCCTGGCCTGCATCAGGAATGGTGTGCCCAGGGAGGTGGTGGAATCACCGTCCCTGGAGGTGTTTAAGAGTAGGCTGGATGAGGCACTGAGTGACATGGTTTAGATGATGGGATGGTGCTAGGTAATAGGTTGGACTTGGTGATCTCAAAGGTCTTTTCCAACCTTGTTGATTCTGTGATTCTCTGATTCTGTAACTTTTTATACACAAACTTCCACCTACTCACCATTCACTGCAAATAAGTCCCTCCATGCAGTAAATTAAATCAATTTATTTTCACAGTTGACAGAGGTCTCCAGCCACTCTTTGCAGTCATCTACACACAGCCCCTTCCTCTTACCCAGTTCACTCCTTTTCTTCCCCTTTGCCCCAACATTTCCCTCCTTTGTACCCTGAGCATGTTCAGCCCCATACTTACAATCAGCCTGCAAAGACAGACTAGACATAGATAAGAAGATAATACTGATTCCCACTCTCTGTAACCCTTCCTGTTTTTCTGTTCTCCACAGCTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACCACCATCCAAGGTAAGGAGAGATCCAAGGAGCCTAAGCTACAACCTGTGCAGCAAAAGCCATAGGGTGACTAACCCGAGTCGCAGTCTTGGCTGGTGCCACGGTACTTCCCAGAGCTTTGAGCTGAAGAACTGCTCTCAGTGGAGCACTGTCCTCTCCCTGCAGGGCTGGATGGGCTGGCTGAGCGCTGTGCCCAGTACAAGAAAGACGGTGCTGACTTTGGCAAGTGGCGCGCAGTGCTCAAGATCACCAGCACAACGCCCTCTCAACTCGCCATCCAAGAGAATGCCAACACCCTGGCACGCTATGCCAGCATCTGCCAGCAGGTACCCACCCTCCAGCAACCTTTCTTGAGATGCTGCTGCTCCTTCTCACTGTTTCCTGTGATAACACACTAAAAAGGAGGATCTCCGTGAGAGTTTTGGGGAAGACAAGGAGGAAGGGCAGCACATCAAGAAGAAATATCACCAAAATCAGGGTCAATGGCAATAACAGTTTTTCTTACATAGCCCTAAAGAATTCCCTGTCTTTCTTTTCTTAGCATGGTTTGGTGCCCATCGTGGAGCCAGAAATCTTGCCTGATGGAGATCATGACCTCCAGCGCTGTCAGTATGTCACAGAAAAGGTAAGAGATTCCTCTCTCTCTCCTTCCCTTTACARATTAGCAGCTAAACTTTCTGAAGTTTGTGCTCACAGATCTCAAGGAGATTTGACCAAAAAGGTACTTCATAACTGCTTCACAAAAATGAGCTGCTCACAGGCAAATAATGAGTTAATAGCAAATGCAAGAGTACAATCCATGGTCTTGGATTTCCACTCAAACTGACAATATAAGCATTCTCAACCTCAAAAAGGTGGATCAGGAGCAAAACCAATTACTTCAATTTCAGTACCTCAGTTTGCAGTGACAAATACAGTCAATAGGAAGAGTGGTATTCTGGTCATCTTAACAGCAGTGATGTCTCCACAACGCCTCTGAGATAATTTCACACATGAAAGCAAAATTCAGTTTGATCTTGTTCCACCCCCAAAGAATAAGCTGTCTTTCCACAGGAGGCTGATGTGAATACATGACGAGAAGTCTGTATTCAATCCTCCTGTTTTCAGGTTCTGGCTGCTGTCTACAAGGCACTGAATGATCATCATGTGTACCTGGAAGGGACACTGTTGAAACCAAACATGGTGACGCCTGGACATTCCTGCTCCAGGAAGTACAGCTCTCAGGACATAGCTGTAGCCACTGTCACTACTCTCCTTCGCACCGTTCCTGCTGCTGTCCCTGGTGATTCCTGATTCCCAATTCATGGGAATTGCTGGTCCTGCTCCTGCCTCTGACATGGCTGCTCCTCTGGCATGCACAGGTCAGGGGTTGGGGTGGCTGAAGCACTCCATTTCTAAGCCTCAAATCCTTTCTTGCAGGAATCTGCTTCCTGTCTGGAGGTCAGAGCGAAGAGGAGGCTTCTGTCAACCTGAACGCCATGAAC\n>Casuarius\nAAAAAGGCATTGTGGTGGGAATAAAGGTGAGTGTCTGTACATGTCTGGCTGGCACAATACTCTAAACCCTRTTTCCAAGGAGAACTATAATATAGGGGCTGCACTCTCCCTTGCAAACCAGTTTTTTGCTTGTTTCTGAAATACCTAGAGGATTTCTGCCCCCGTTCTTTGTACGGCTTTTGTACAAATAAGCAGGACACATTTGTGCATTTACATATGATCTGGGACCTTTTCACCCAGCACTACTTCCCTGCAACAAATGCTGCATCATTCACTGAAATTAAACCTCTTCTCTCAGTACACAAACTAAAATCCTTTCTGAGGCTGACAGAACTCTTGACCTGTTCCCTGCAACCCCCTGTGTATTGCCTGATCCTCTTACCCAGTTCATTCCTTTTCTTCCCCTTTGCTCCAACACTTCTCCCCTATCTCCCCTTAGCCTATTCAGTCCCATACTTTACCCACAGTTTGTCTGCAAAAACAGACTAGCCATGGGTCACAAGATAAGTAACAGACTGATATCCATCTATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACCACCATACAAGGCAAGGAGAGATCTAAGTAGCCATAATTATGACTGGTAAAGTGAAAGCCATCAGATGACTAAAGGGGTTTGCAGCCTTAGCTGGTGTCATGATACTTTTCAGTACTATGTTGAGAACACAAAGTTCAGCCCTACCCATGAAGGACTGCTCTCAGTGAAGCACTGTTCTTTCATCTGCAGGGCTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGTTGACTTTGGCAAATGGCGTGCGGTGCTGAAGATCACCAGCACAACTCCCTCTCAACTCGCTATCCAGGAGAATGCTAACGCACTAGCACGCTACGCCAGCATCTGCCAGCAGGTACCTATCCTCCACTAATCTTTCTTGAGATGCTGTTACCCTTTCTCATTGTTTCCCATGGTAACAGCTAGATATCTTGAAAGACCGATCTCTGCAAGGGGTTTCAAAAACAATGAGAAAGAGGGACCATACAGCAAGAAGGAATACTATCAATGTTGAGGGAGACAGCAAAGACAGTTTTTCTTCCATACCTGCAAAGACTTTCCTGTTTTTCTTTCCTTAGCACGGGTTGGTGCCCATTGTGGAGCCAGAAATCTTGCCTGATGGAGACCATGATCTCCAACATTGTCAGTATGTCACAGAAAAGGTAAGAGATCTTTGCCATGCCCTTCTTCAAAAATCAGTGGTTAATCTTTCGCAGAGTTTGCATTCACAGATCTCAGGGAGTTTTGACCAAGAAAGTACTTCCTAACTGCACCAGAGAAATCAGTTGCTCACAAGTGATGATTTAATAGCAAATGTGAGACTAGGATCCTTGCTTTTGGATGTCCATTCAAACCTCCATTAGAAGCATTCTCCATCTCAGAAAGATTCACTGGGGGTAAAAGTATCTATCTCTCTTTCAGTACTCCTGTTCACAGGGACAAATCCAATAAACATAAAGAGTGGTATATTAGTCATCGCAAAAGCAGTGGTGTCTCCAGGGTTGCATTACTGACTCCTGTGATAAACTTCAAGAGAAAGGGAAGTTCAGTTTGATCTTCTTGCCACACTCTCAAGCAATAAGCTGTCTTTCCACAACAGGCTGAGCACACTGTTCAAGAATCTCTGGGTGTGAATTAGATGGGTCTTAGTATGTGAAGATCTTAGCATGGGTCTGTATTTAATCCTCCTGTTCTCAGGTTCTGGCTGCTGTCTACAAGGCCTTGAATGATCATCATGTCTACTTGGAAGGGACACTGCTGAAACCCAATATGGTGACGGCTGGGCATTCCTGCCCCAAGAAGTACACCCCTCAGGATGTAGCCATAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTCCCAGGTGATTCCCAATTTATTACTATCTATCCATTACTATGTACCAATCTTTCACATTGTCACTCTCACTGGCCTTGCTCCCACATATGATACACTCACTTCTCTGGCACATAAGGGTCAGGGACTGTGGTGAGTGCAGCACTCAGCTTCTTCCCCTTTTTATTGCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACCTAAATGCCATGAAT\n>Dromaius\nAAAAAGGCATTGTGGTGGGAATAAAGGTGAGTGTCTGTACATGTCTGGCTGGCACAATACTCTAAACCCTATTTCCAACGAAAACTATAACATAGGGGCTGCACTCTCCCTTGCAAACCAGTTTTTTGCTTGTTTCTGAAATACCTAGAGGATTTCCGCCCCCGTTCTTTGTATGGCTTTTGTACAAATAACCAGGACACATTTGTGCATTTACATACGATCTGGGACCTTTTCATCCAGCACTACTTCCCTGCAACAAATGCTGCATCATTCACTGAAATTAAACCTCTTCTCTCAGTACACAAACTAAAATCCTTTCTGAGGCTGACAGAACTCTTGAGCTGTTCCCTGCAACCCCCTGTGTATTGCCTGATCCTCTTACCCAGTTCACTCCTTTTCTTCCCCTTTGCTCCAACACTTCTCCCCTATCTCCCCTTAGTCTATTCAGTCCCATACTTTACCACAGTTTGTCTGCAAAGACAGACTAGCCATGGGTCACAAGATAAGTAACAGACTGACATCCATCTATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACCACCATACAAGGCAAGGAGAGATCTAAGTAGCCATAATTATGACTGGTAAAGTGAAAGCCATCAGATGACTAAAGGGGTTTGCAGCCTTAGCTGGTGTCATGATACTTTTCAGTACTATGTTGAGAACACCAAGTTCAGCCCTACCCATGAAGGACTGCTCTCAGTGAAGCACTGTTCTTTCATCTGCAGGGCTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGTTGACTTTGGCAAATGGCGTGCGGTGCTGAAGATCACCAGCACAACTCCCTCTCAACTCGCTATCCAGGAGAATGCTAAYGCACTAGCACGCTACGCCAGCATCTGCCAGCAGGTACCTACCCTCCACTAATCTTTCTTGAGATGCTGTTACCCTTTCTCATTGTTTCCCATGATAACAGCGAGGTATCTTGAAAGACCGATCTCTGCGAGGGGTTTCAAAAACAATGAGAAAGGGGGACCATACAGCAAGACGGAATACCATCAGTGTTGAGGGAGACAGCAAAGACAGTTTTTCCTCCATACCTGCAAAGACTTTCCTGTTTTTCTTTCCTTAGCACGGGTTGGTGCCCATTGTGGAGCCAGAAATCTTGCCTGATGGAGACCATGATCTCCAACATTGTCAGTATGTCACAGAAAAGGTAAGAGATCTTTGCCATGCCCTTCTTCAAAAATCAGTGGTTAATCTTTTGCAGAGTTTGCATTCACAGATCTCAGGGAGTTTTGACCAAGAAAGTACTTCATAACTGCGCCAGAGAAATCAGCTGCTCRCAAGTGATGATTTAATAGCAAATGTGAGACTAGGATCCTTGCTTTTGGATGTCCATTCAAACCTCTGTTAGAAGCATTCTCCATCTCAGAAAGATTCACTGGGGGTAAAAGTATCTATCTCTCTTTCAGTACTCCTGTTCACAGGGACAAATCCAATAAACATAAAGAGTGGTGTATTAGTCATCGCAAAAGCAGTGGTGTCTCCAGGGTTGCATTACTGACTCCTGTGATAAACTTCAAGAGAAAGTGAAGTTCAGTTTGATCTTCTTTCCACACTCTCAAGCAATAAGCTGTCTTTCCACAATAGGCTGAGCACACTGTTGAAGAATCTGTGGGTGTGAATTAGATGGGTCTTAGTATGTGAAGATCTCAGCATGGGTCTGTATTTAATCCTCCTGTTCTCAGGTTCTGGCTGCTGTCTACAAGGCCTTGAATGATCATCATGTCTACTTGGAAGGGACACTGCTGAAACCCAATATGGTGACGGCTGGGCATTCCTGCCCCAAGAAGTACACCCCTCAGGATGTAGCCATAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTCCCTGGTGATTCCCAATTTATTACTATCTATCCATTACTATGTACCAATCTTTCACATTGTCACTCTCACTGGCCTTGCTCCCACATATGATACACTCACTTCTCTGGCACATAAGGGTCAGGGACTGTGGTGAGTGCAGCACTCAGCTTCTTCCCCTCTTTATTGCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACCTAAATGCCATGAAT\n>Apteryx\nAAAAAGGCATTGTGGTTGGAATAAAGGTGAGTGTTTGTACATGTCTGGCTGGTGCTCTAAACCCTATTTCCAAWGAGAACTATAATGTAGGGGCTGCACTCTCCCTTGCAAAACAGTTTTTTGCTTGTTTTTGAAATACCTAGAGGATCTCTGCCCCCATTCTCTGTACAGCTCCTGTACAGATAACCAAGACACATTTGTGTATTTACATATGACCTGGGACCTTTTCATCCAGCACTACTTCCTTGCAACAAATGTTGCATCATTCACTGAAATTAAACCCCTTCTCTCAGTACACAAACTAAAATCCTTTCTGAGGCTGACAGACCTCTTGAGCTGTTCCCTGCAGCCACCTGCATATTGCCTGATCCTCTTATCCAGCTCACTCCTTTTCTTCCCCTTTGCTCCAACACTTCTCCTCTATCTCCCCTTAGCCTATTCAGTCCCATACTTTACCCACAGTTTGTCTGCAAAGACAGACTAGCCATGGGTCACAAGATAAGTAACAGATTGATCTCCATCTATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACCACCATACAAGGCAAGGAGAGACCTAAGTAGCCATAATTATGATTGGTAAAGTGAAAGCCATCAGATGACTAAASTGGTTTGCAGCCTTAGCTGCTGTTATGATACTTTTCAGGACTATGTTGAGAACACAAAGTTCAGCCCTACCCATAAAGAACTGCTCTCAGTGAAGCACTGTTCTTTCATCTGCAGGGCTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGCTGACTTTGGCAAATGGCGTGCAGTGCTGAAGATCACCAGCACAACTCCCTCTCAACTCGCTATCCAGGAGAATGCTAATGCACTAGCACGCTATGCCAGCATCTGCCAACAGGTATCTACCCTCCACTAATCTTTCTTGAGATGCTGCTATCCTTTCTCACTGTTTCCTGTGATAACAGCCAGATATCTTGAAAGACCGATCTCTGTGAGGGGTTTCAAAAACAATGAGGAAGAGGGGCCATACAGCAAGAAGGAATACTATCAATGTTGGGGTAGACAGCAAGGACAGTTTTTCTTCCACACCTGCAAAGACTTTCCTGTTTTTCTTTCCTTAGCATGGGTTGGTGCCCATTGTGGAGCCAGAAATCTTGCCTGATGGAGACCATGATCTCCAACGTTGTCAGTATGTCACAGAAAAGGTAAGAGAGATCCTTGCCATGCCCCTCTTCAAAAATCAGTGGTTAATCTTGTGCAGAGTTTGCATTCACGGATGTCAGGGAGTTTTGACCAAGAAAGTACTTCATAATTGCGCCACAGAAATGAGCTGCTCACAAATGATGATTTAACAGCAAACGTGAGACTAAGATCCGTGCTTTTGGATATCCATTCAAACCTCCGTTAGAAGCATTTTCCACCTCTGAAAGATTCACTGGGAGTAAAAGTATCTACCTCTCTTTTGGTACCCCTGTTCACAGGGACAAATCCAATAAACATAAAGAGTGGTATCTTAGTCATCCCAAAAGCAGTGGTGCCTCCAGGGTTGCATGACCGACCCCTGTGATAAACTTCAAGAGAAGGGGAAGTTCAGTTTGATCTTCTTTCCACACTCTCAAGCATTAAGCTGCCTTTCCACAACAGGCTGAGCATGCTGTTGAAGATCTGTGGGTGTGAATTAGATGGGTCTCAGTATGTGAAAATCTCAGGAAGAGTCTGTATTTAATCCTCCTGTTCTCAGGTTCTGGCTGCTGTCTACAAGGCCTTGAATGATCATCATGTCTACTTGGAAGGGACACTGCTGAAACCCAATATGGTGACGGCTGGACACTCCTGCCCCAAGAAGTACACCCCTCAGGATGTAGCCATAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCAGCTGTCCCTGGTGATTCCCAATTTATTACTATGTATCCATTACCATGTATCAATCCTTCACATTGTCACTCTCACTGGCCTTGCTCCTACATACGATACACTCACTTCTCTGGCACGTAAGGGTCAGGGACTGTGGTGGCTGCAGCACTCAGCTTCTTCCCTCCTTATTGCAGGAATCTGCTTCCTGTCTGGAGGCCAAAGTGAAGAGGAGGCTTCTCTCAACCTAAATGCCATGAAT\n>Rhea\nAAAAAGGCATTGTGGTGGGAATAAAGGTGAGTGTCTGTACATGTGTCTGGCTGGCACAATACTCTAAACACTATTTCCAATAAGAACTATAATATAGGGGCTACACTCTCCCTTGTAGACCAGTATTTTGCTTGTTTCTGAAAATACCTAGAGGATCTCTGCCCCCATTCTCTGTATAGTTTTTGTACAAATATCCAGGACACATTTGCGCATTTACATAGAATCCAGGACCTTTTCATCCAGCAAAGGATGTACTTCCTTGTACAAATGTTACATCACACACTGAAATTAAACCTCTTCTCTCAGTACACAAACTAAAATCCTTTCTGAGTCTGACAGAACTCTTGAGCTGTTCCCTGCAGCCACCTGCATATTATCTGATCCTCTTACCCAGTTCACTCCTTTCTTTCTCCTTTTCTTTAACACTTCTCAGATATGTCCCTTTAGCCTATTAAGTCCAATACTTTACCCACGGTTTGTTTGCAAAGACAGACTAGTCATAGATCACAAGATAAGTAACAGATTGATCTCCATGTATTTTTCCTGTCTCCACAGTTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACTACCATACAAGGCAAGGAGAGATCTAAGTAGCCATAATTATGATTGGTAAAGTGAAAGCCATCAGATGACTAAACTCGTTCACAGGCCTTAGCTGGTGTCATGTTACATTTCATGGTGAAAGCACTAAGTTCAGCCTTCTCATAAAGAACTGCTGTCWGTGAAGCACTGTTCTTTCATCTGCAGGACTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGTTGACTTTGGCAAATGGCGTGCAGTGCTGAAGATAACCAGCACAACTCCCTCTCAACTTGCTATCCAGGAGAATGCTAACACACTAGCACGCTACGCCAGCATCTGCCAGCAGGTATCTACCCTCTATTAATCTTTCCTGAGATGCTGTTACTGTTTCTTACTGTTTTCTGTAATAACAGCTATTTTGAAAGATCAGTCCCTGTGAGAGGTTTCAGAGACMATGAAGAAGAAGAGCCATACAGYAAGGAGGAATACTATCAATGTTGGGGTAGACAGCAAGGACAGTTTTTCTGCCACATCTGCAAAGACTTTCCTGTTTTTCTTTCCTTAGCATGGATTGGTGCCCATTGTGGAGCCACAAATCTTGCCTGATGGAGATCACGATCTCCAACGTTGTCAGTATGTCACAGAAAAGGTAAGAGAACCTTTCCATATCCATCTTCACAAATCAGTGGTTAATCTTGTGCAGAGTTTGCACTCACAGATCTCAGGGACTTTTGACCAAGAAAGTTCTTCATAATTGCACTACAGAAATGAGTTAGTCACAAAAGATGATTTAATAGCAAATGTGAGACTAGGATCTTTGCTTCTTGATGTCCATTCAAACGTCTCTTAGAAGCATTCTCCATCTCAGAAATATTCACTGGGAGTAAAAGAATCTACCTCTCTTTTGGTATCCCTTTTCACAGGGACAAATCCAATAAACATGAAGAGTGGTATCCTAGTCATTCCAAAAGCAGTGGTGTCTCCAGGGTTGCATTACTGACCCCATGATGAACTTCAAGAGAAATGGAAGTTAGTTTGATCTTCTTTCTATGCTCTCAAGCAATAAGCTCTCTTTCCACAACAGGTTGAGCACACTGTTGAAGAATCTGTGGGTGAGAATTAGACGAATCTCAGTATGTGAAGATCTCAGCATGGGGTCTGTATTTAATCCTCTTGTTCTCAGGTTCTGGCTGCTGTCTACAAGGCTTTGAATGATCATCATGTCTACTTGGAAGGGACACTGCTGAAACCCAATATGGTGACGGCTGGGCATTCCTGCCCCAAGAAGTACACCCCTCAGGATGTAGCCATAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTCCCTGGTAATTCCCAATTTATTATTATGTATCCACTACTATGTATTCACATTGTCACTTTCACTAGCCTTGCTTCTACCTGTGATACACTCAATTCTTTGGCACATAAGGGTCAGGGAGTGTGGTGCCTGCAGCACTCAGCTTCTTCCTCTCCTTATTGCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACCTAAATGCCATGAAT\n>Struthio\nAAAAAGGCATTGTGGTCGGAATAAAGGTGAGCGTCTGTACATGCCTAGCTGGCACAATACTCTAAACCCTATTCCCAATGAGAACTGTAATACAGGGGCTGCCCTCTCCCTTGCAAACCAGTTTTTTGTTTGTTTCTGACCCTAGAGGATCTCTGCCCCCATTGTCTGTGCGGCTTTCGTACAAATAACCAGGATACATTTGTGCATTTACATATGATCCAGGACCTTTTCATCTAGCAATACCCCTCTACTTCCTTGCAATAACTGTTGCACCATTCACTAAAATTAAAGCCTTCCTCTCAGTATACAGACTAAAAACCTTTCTGAGTCTGAGAGAGCTCTTGAGCTGTTCCCTGCAGCCACCCGCAAATTGCCCAGTCCTCTTACCTGACTCACTCCTTTCTTCCCCTTTTCTCCAAAACTCCCCCCAACACCACATCTTCCCTTAGCCTATACTTTACCTACAGTTTGTCGGCAAAGACAGACTAGCTATGGATCACAAGATAAGTAACAGACTGATCTCCATCTATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACCACCATACAAGGCAAGGAGAGATCTAAGTAGCCATACTTAAGATTGGTAAAGCGAAAGCCATCAGATCACTCAAGCGGTTTTGCAGCCTTGGCTGGCATCATAATACTTTTCAGGGCTACGTTGAGACCACAAAGTTCAGCCCTACTCCAAAAAAACTGCTCTCAGTGAAGCATTGTTCTTTCATCTGTAGGGCTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAAAAAGACGGTGTTGACTTTGGCAAATGGCGCGCGGTGCTGAAGATCACCAGCACAACTCCCTCTCAGCTCGCCATCCAGGAGAATGCTAACACACTAGCACGCTATGCCAGCATCTGCCAGCAGGTATCTGCCCTCCACTAATCTTTCTTGAGATGTTGTTACCCTTTATCTCTGCTCCTGTGATAACAGCTAGATATCTTGAAAGACTGCTTACTGTGACGGGTTTCAAAAACGATGAGGAAGAGGGGCTGTACAGCAAGAAGGAATACTATCAATGAAGGGGATAGACAGCAATGACAGGTTTTTTTTTTTTTTTCCACATCTGCAAAGACTTTCCTGGTTTTCTTTCCTTAGCACGGATTGGTGCCCATTGTGGAACCAGAAATCTTGCCTGATGGAGACCACGATCTCCAGCGCTGTCAGTATGTCACAGAAAAGGTAAGAGATCCTCACCTCTTCAAAAATCAGTGGTTAACCTTGTGCAGAGTTTGCATTCCTAGATTTCAGGGAGTTTTGAACAAGAAAGTACTTCATGACTGTGCCACAGAAATGAGTTACTCACATATAATGATTTAATAGCAAACTTGAGACTAGAATCCATGCGTTTGGATGTCCATTCAAACTTCCGTTAGAAGCATTCTCCATCGCAGAAGGATTCACTGGGGGTAAAAGTATGTACCTCTCTTTTGGTGTCCCTGTGAACAGGGACAAATCCAATAAACATAAAGAGTAGTATCTTAGTCATTCCGATAGCAGACTGTCTCTCAGGTTGCATTACTGACCCCCGTGATAAAGGTCAAGAGAAAGGGAAGTTCAGTTTTATCTTCATTCCACAACAGACTGAGGACACTGTTGAAGAATCTGTGGGTGTGAATTAGATGGGTCTCAGCGTGTGAAGATCTGAGCATAGGTCTGCATTTCATCCTTCTGTTCTCAGGTTCTGGCTGCTGTCTACAAGGCTTTGAATGATCATCACGTCTACTTGGAAGGGACACTGCTGAAACCCAATATGGTGACGGCTGGGCATTCCTGCCCCAAGAAGTACACCCCTCAAGATGTAGCCATAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTCCCTGGTGATTCCCAGTTTATTACTATGTATCCATTACTATGTCTCAGTCCTTCACATTGTCACTCTCACTGGCCTTGCTCCTACGTATGATACCCTCACTCATCTGGCACACGAGGGTCAGAGACTGTGGTGGCTGCAGCACTCAGCTTCTAAGCCTTATTTTCCCCTCACTGTAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACCTGAATGCCATGAAC\n>Tinamus\nAAAAAGGCATTGTGGTGGGAATAAAGGTGGGTATCTATATGTGTCTGGCTGTCACAATTCTCGAAGCCCTGTTTCCAATGAGAATTATAATACAGGGGCTGCACTCTTCCCTGCAAAACCTTTTTCCTTTTTTTTTTTTAATAGAGGATCTCTGTCCTCATTCTCTGTATAGCTTTTGAAGAAATAAGCAGGACAGATTTGTACATTTATATATGATCCAGAACCTTTTCATCCAGCACTACTTCCTTGCAACAAATGTTATATCATTCACTAACACCAAACCTCTTCTCTCAGTACACAAATTAAAATCCTTTCAGAGATTGGCAGAACTCTTGAGCTGTTCCCTTTGTTCCCTTCAGCCACCTGCGTACGGCCAAGTCCTCTTTCTGAGTTCACTCTTTTCTTCTCCTTTGCTTCAACACATTTTGGCTATCTCCCCTTAGCTTGTTCAGTCCCATACCTTACCTATAGTTTGTCTGCAAAGACAGACCAGCCACGAGTCACAAGATAAGTAACAGACTGATCTCCATCCATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCCCTAGCAGGAACAAATGGAGAAACCACCATACAAGGCAAGGAGAGATCTAAATGTGATTATGATTGGTAAAGTGAAAGCTACCAGATGATCTGATCGCAGCCTTAGCTGGGGCCATGATAGTTTTGGTACTGTGTTGAGAACACAAAGTTGAGCCCTACCCATAAAGATTCTTTTATCTGCAGGGCTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGACGGTGCTGACTTTGGCAAGTGGCGGGCAGTGCTGAAGATTACCAGCACAACTCCGTCTCAGCTTGCTATCCAGGAGAATGCTAACACACTTGCACGCTATGCCAGCATCTGCCAGCAGGTATCTACCCTCCACTAGCCTTTATTGAGATGCTGTTACGAGTTCTCACTGTTTCCTGTGATAGCAACTATATCTCTGTAAGCAGATTAAAAAATAATAAGAAAGAGCAGCCAGACTGCAATCAGGACACTATCAGTGTTGGGTTGGGCAGTTTTGTTTCCACACCAGCAAAGATTTTTCCGTTTTCTTTCCTTAGCATGGGTTGGTGCCCATTGTAGAACCAGAAATCTTGCCTGACGGAGACCATGATCTCCAGCGTTGTCAGTATGTGACAGAAAAGGTAAGCTATCCTTGCTATGCCCCTCTTCAAAAATCACTGATTGTCTAGTGCAGAGTTTGCATTCACAAATCTTATGGGGTTTTGACCAAAAAAATACTTCGTAACTACACTGTAGAAATGAGATGTCACAAATGATGATTTAATAGAAAATAAGAGTTTTAGAAAACAAGAGAAATTTAGTCGCTTGTCATTTGGATGCCAAATCGAATCTCTGTTACAAGCATCTCACAAAGGTTAATGGGGGGTAAAAATATCTACCTCTTATTCTGTACCCATGTCCACAAATAAATCCAAGAAACATAAAGAGTATCTTAGTCATGCCAAAAGCAGTAGTATCTCCAGGGCTGCACTCGCCACCGCTGTGCTAAACTTCAAGAGAAAGGGAAGTTCAGTTTGATCTTCTCTCCGCTCCCTCAAGCAATAAGCTGTCTTTTCACAATAGGCTGAGCACACTGCATGTGAGAATTAGGTGAGTCTCAGTATGTCAAGACCTCAGAGGCATGGGTGAGGAATGTGAAATCTCAGCATACTGTGATCATGGGTCTATATTAATCCTCCTGTTCTCAGGTTCTGGCTGCTGTCTACAAGGCCTTGAATGATCACCATGTCTACTTGGAAGGGACACTGCTGAAACCGAACATGGTGACAGCTGGGCATTCCTGTCCCAAGAAATACACACCTCAGGATGTAGCTGTAGCAACTGTCACTACTCTCCTGCGTACTGTTCCTGCTGCTGTGCCTGGTGATTCCCAATTTATTTCTATGTACCCATTACTATGTATCACACTGTCATTCTCACTGGCCTTGCTCCTGAACTCATTGCTCTAGCACATAAGGGTCAGGGGCTATGGTGGCTGCAGCACTCAGCTTCTTTTCTTCCGTATTGCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACTTAAATGCCATGAAT\n>Nothoprocta\nAAAAAGGCATTGTGGTGGGAATAAAGGTGGGTATCTGTATTTATCTAGTTGTCATAATATTCTAAGCCCTATTTCCAATGAGAACTGTAATACAGGGGCTGCACTCTTCGCTGCAAAATATTTTTCCTTGTTTTTTAGAAAGCGTTGAGATCTCTGTCCTCATTCTCTGTACAGCTTTTGAAAAAAAATAAGCAGGACACATTTGTACATGATCCAGCACCTTTTCATCCAACACTACTTCCTTGGAGCAAATGTTGCAACATTCACTGATACCAAACCTCTCATCTCAGTACACAAATTAAAATCCTTTCAGAGGCTGACAGAACTCTTGAGCTGTTCACTTCAGTCATCTGTGTATTGCTCAGTCGTATTTCCCAGTGAACTCCTTTCTTCCCCTTCAGCACATTTCAGCTATCTCTCCTTAGCCTGTTCAGTCCCGTACTTTACTTATAGTTTGTCTGCAAAGACAGAATAGCCATGGGTCACAAGATAAGTAACAGACTGATCTCTATCTATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCCCTAGCAGGAACAAATGGAGAAACCACCATACAAGGCAAGGAAAGATCTAAGTATGATTATGATTGACAAAGTGAAAGCCATCAGATGACCACAGCCTAAGCTGGTGTCATGATACTTCTAGGACTGTGCTGAGAACACAAAGTTGAGGCCTACCTATAAGGAACTGCTTTCAGTGAAGCACTGTTCTTTCATCTGCAGGGCTGGATGGACTAGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGGGCTGACTTTGGCAAGTGGCGGGCAGTGCTGAAGATTACCAGCACAACTCCCTCTCAGCTTGCTATCCAGGAGAATGCTAACACACTTGCACGCTATGCCAGCATCTGCCAGCAGGTATCTACCCTCCACTAGTCTTTCTTGAGATGCTGTTACTAGTTCTTAACTATTTCCTGTGATAGCAACTACATCTCCGTAAGCAGTTTAAAAAACAACAACAAAAAAGCAGCTAGACTGCAACTAGCATACTATAATTGCTGGGGGTGTCGGCAAAGATTTTTCTTTTTTTCTTTCCTTAGCATGGGTTGGTGCCCATTGTAGAACCAGAAATCTTGCCTGATGGAGACCATGATCTCCAGCGTTGTCAGTACGTGACAGAAAAGGTAAGTTACCCATGCTATGTGCCTCATCAAAAATCAGTGATTAGTGCAGAGTTTACATTCACAGATAATCAGGGGAGTTTAACCAAGAAAATACTTGGTAACTTTATCACAGAAATGAGATGCTCATATATGATGATTTATTGGAAAACAAGAGACCAGAATCTAGTCTCTTGTCTTTTACATGCCAAATTGAATATCTGTTAGAAGCATCTCACAAAGATTCATGGGGAGTAAAATTGCCTGTTCTTCTGTAACCCTGTTCACAAATCCGAGAAAGATAAAGAGTACCTTAGTCATTCCCAAAGCAGTAGTATCTCCAAGGCTGTAGTAGTGACCCCAGTGACAAACTTCATGAGAAAAAAAAGCTCAATTTCATACTCTCCATACTTTTCTCCATACCGTCAAGAAATAAGCTATTTTTCCACAATAGGCTGAGCACACTGCAGGTGAGAATTAGATGAGTCTCAGTATGGAAAATCTCCGAGGTATGAGTCAGAGATCTGAAATTTGAGCATACTGAGATCATGGGTCTATATTTAATCCTCTTGTTCTCAGGTTCTGGCTGCAGTCTACAAGGCCTTGAATGATCATCATGTCTACTTGGAAGGAACACTGCTGAAACCCAACATGGTGACAGCTGGGCATTCCTGCCCCAAGAAGTATACCCCTCAGGATGTTGCCGTAGCAACTGTCACTACTCTCCTGCGTACTGTTCCTGCGGCTGTGCCTGGTGATTCCTAATTTATTACTATGTACCCATTACTTTGTGTCAAACCATCACACTGTCACTGTCACTGGCCTTGCTCCTAAACTCATTGCTCTGGCAGATAAAAGTCAGTGGCAATGGTGGCTGCAGCACTCAGCTTCTTCCCTTCCTTACTGCAGGAATCTGCTTCCTGTCTGGAGGTCAAAACGAAGAGGAGGA\n>Ciconia\nAAAAAGGCATTGTGGTGGGAATAAAAGTGAGTATCTGTACACGTGTGGCAGGCAGCATACTCCAAACCCCGTTTCCAGTGAAAATTATATATGGGGCTGCACTCTCTCCTGCCAAACACTTTTTTTTCTTTTTTTGTGCTTGATTTTAAAATCCCTAGAGGATCTCTGCCACCATTCTATGCATTGCTTTTGTACAACTAACCAGGGGCACATTTGCATTTGATGTAGGAACTTTTCATTCACCAACTCCCATCTACTCACCATTCACTGCAATTAAATCCCTCCATGCAGTAACCTAAATCCAGTCCTTTCAGCATCTGACAGAGCTCTTGAACCATTCCCTGCAGCCTTCTACACATTGCCCCTTCCTCTTACCCAGTTCACTCCTTTTCTTCCCCTTTGCTCCAGCGTTTCCCTCCTTTGCACCCTTAGTGTGTTCAGCCCCATACGTTACTCACAATCAGCCTGCAAAGACAGACTAGCCATGGGTAAGAAGATAAGGATGACACTGATCTCCATCTCTCTGTAACCGTTCCTGTTTTTCGGGTCTCCACAGCTGGATAAAGGCACAGCACCCCTAGCAGGAACAAATGGAGAAACCACCATTCAAGGTAAGGAGAGATCTAAGGAACCTAAGCTATGACTGGTGCAGCAAAAGCCAAGGGGTGACTCGCCTGAGTCACAGCCTTGGCTGGTGTCACGGTACTTTTCAGAGCTATGTCCTGAAGAACTGCTCTCAGTGAAGCACTGTTCTTTCATCTGCAGGGCTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGACGGTGCTGACTTTGGCAAGTGGCGTGCAGTGCTAAAGATCACCAGCACAACACCCTCTCAACTCGCCATCCAAGAGAATGCCAACACATTGGCACGCTATGCCAGCATCTGCCAGCAGGTATCTACCCTCCAGCAACCCTTCCCGAGATGCTGTTGCCCGTTCTGACTGCTCCCTGTGATAACATGCTAGGTAACTTGAAAGGCGGATCTCTGCGAGGGTTTTGGGAAAGATGAGGAAGAAGGGCAGCGCAGCAAGAAGGAATACCAACAAAGTCAGGGTAGACAACAAGGACTGGTTTTCTTCCACGCTCTCCAAAACTTCCCTGTTTTTCTTTCCTTAGCATGGCTTGGTGCCCATTGTGGAACCAGAAATCTTGCCTGATGGAGACCATGATCTCCAGCGCTGTCAGTATGTCACAGAAAAGGTAAGAGATTCCTGCCCCCGTCCTCCCCTTCACAAATCAGTCGCTAATCTTATGCAGAGTTTGTGTTCACAGATCTCAGAGAGTTTTGACCAAAAATGTACTTCATAACTGCATCACAAAAATGAGTTGCTCATGGTCAAATAATGAATTAACAGCCAATGTGAGAGTAGAATCCATGCTTTTGGATTTCCACTCAAACTGCCAATATAAGCATTCTCAATCTCAAAAAGATGGATTGGGAGCAAAACCACTTACCCCTCTTTCAGTGCCTCAGTTTGCAGGGACAAATCCAGTAAATAGGAAGAGGGGTATCCTGGTCATCTCAAAAGCAGTGGTGTCTCCAGGGCTGCAACCCCTGGGATAAATTTCACAAGTTCAATTTGATCTTCTTACACTCCCAAGCAATAAGCTGTCTTTCCACAGCAGGTTGAGGTGAAGATTTCAGCAGAGGTCTGTATTCAATCCTTCTCTTTTCAGGTTCTGGCTGCTGTCTACAAGGCCTTGAATGATCATCATGTCTACCTGGAAGGCACACTGCTGAAACCCAACATGGTGACGGCTGGGCATTCCTGCCCCAAGAAGTACACCCCTCAGGATGTAGCCGTAGCAACTGTCACTACTCTTCTCCGTACCGTTCCTGCTGCTGTTCCCGGTGATTCCCAATTCATTCCTATGTATCCATTCACACTGTCACTCTTGCTGGCCTTGCTCCTACATCTAACACGCTCACTCCTCTGGCACGTAAAGGTCAGGGATTGCGGTGGCTGGAGCACTCTCTGAACCTCAAAACCTCTTTCTTGCAGGAATCTGCTTCCTGTCTGGAGGTCAGAGTGAAGAGGAGGCTTCTGTCAACCTGAATGCCATGAAT\n>Buteo\nAAAAAGGCATTGTGGTGGGAATAAAGGTGAGTATCTGCAGATGTCTGGATGGCAGCATAATCTAAAACCCATTACCAGTGAAAATTATATATGGGGCTGCACTCTCTCCTGCCAAACACCTTTTTTCTTTTTTGTGCTTGGTTTTAAAATAACTAGAGGATCTCTGCCACCATTCTCTGCATTGCTTTTGTACAACTAACCAGGAGCACATTTGCATTTAGTGCAGGAACTTTGCATTCACCAACTCGCACCTACTCACCGTTTGCTGCAATTAAATCCCTCCATGCAGTAACCTAAATCCAGTCCTTTCTGCATCTGATAGAGCTCTCGAGCCATTCCCTATGGCCATCTACACATTGTCCCTTCCTCTTGACCAATTCACTCCTCTGCCTCCCCTTTGCTCCAACATTTCCCTCGTTTGCACCCTTAGCATGTTCAGCACCATGCTTCACTCACAGTCAGCCTGCAGCGACAGACTAGCCATGGGTAAGAAGGCTGATCTCTATCTTTCTGTAACCCTTCCTGTTTTCCTCATCTCCACAGTTGGATAAAGGCACAGCACCCCTAGCAGGAACAAATGGAGAAACCACCATCCAAGGTAAGGAGAGATCTAAGGAGCCTAAGTTATGACTGGTGGAACAAAAGCCATGGGGTGGCTACCCTGAGTCGCAGCCTGGGCTGGTGTCATGGTACTTTCAGAGCTATATCCTAAAGAACTGCTCTCAGTGAAGCACTGTTCTATCATCTGCAGGGCTGGATGGATTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGCTGACTTTGGCAAGTGGCGTGCAGTGCTGAAGATCACTAGCACAACACCCTCTCAACTTGCCATCCAAGAGAATGCCAACACATTGGCACGCTATGCCAGCATCTGCCAGCAGGTATCTACCTTTCCTGAGATGCTGTTGCCCCTTCTCACTGTTCTCTGTGATAACATGATAGGTAACTTGAAAGGCAGATCTCTGTGAGGCTTTTGGGAAAGATGAGGTAGAAGGGCAGTGCAGCAAGAACGAATACCACCAGTCAGGGTAGACAAGAACAGTTTTTCTTCCACATCCCTAGTGACTTCCCTGTTTTTCTTTCCTTAGCATGGCTTGGTGCCCATTGTGGAGCCGGAAATCTTGCCTGATGGAGACCATGATCTCCAACGCTGTCAGTATGTCACAGAAAAGGTAAGAGATTCCTGCCCCTCTCCTCCCCTTCACAGATCAGTAGCTGATCTTATTCAGTTTGTACTCACACATCTCAAGGAGTTTTGACCAAAAAGGTACTTCGTAACTGCATCACAAAAATGAGTTGCTCACAGTTAATAGTGAATGCGAGAGTAGAATCCATGCTTTTGGATTTCCACTCGAACCACCTATATAAGCATTCTCAATCTCAAAAAGATGCACAGGGACCAAACCCACTGACCACTCTTTCAGTACCTCAGCTTGCAGGGACAAGTTCAGTAAATATGAAGAGTGGTATCCTGGTCATCTCAAAAGCAGTGGTGTCTCCAGGGCTGCAACCCCTGTGATAAATTTCATGAGAAAGCAAAATTCAATTTGATCTTCTCACACTCCCAAGGAATGAGCTGTCTTTCCACAGAAGGTTGAAGTGAAGATTTGAGCAGAGATCTACATTCGCTCCTCCTGTTTTCAGGTTCTTGCTGCTGTCTACAAGGCCCTGAATGATCATCATGTCTACCTGGAAGGGACACTGCTGAAACCCAACATGGTGACAGCTGGGCACTCCTGCCCCAAGAAGTACACCCCTCAGGATGTAGCCATAGCAACTGTCACTACTCTTCTCCGCACCGTTCCTGCTGCCGTTCCCGGTGACTCCCAGTTCATTCCTATGTATCCATTCACACTGTCACTCTTGCTGGCCTTGCTCCTACATCTGACATGCTCACTCCTCTGGCACATAAAGGTCAGGGATTGCGGTGGCTGAAGCACTTAAGCCTCGAAACCTTTTTCTTGCAGGAATCTGCTTCCTGTCTGGAGGTCAGAGTGAAGAGGAGGCTTCTGTCAACCTGAATGCCATGAAT\n>Eudromia\nAAAAAGGCATTGTGGTGGGAATAAAGGTGGGTATCTATACATGTCTGGCTGTCAAAATACTCTGAGCCCTGTTTCCAATGAGAACTATAACACAGGTGCCACATGCTTCTCGGCAAAACATTTTTCCATGTTTTTTAAAAAATCTAGATCTGTCCCCATTCTTTGTACAGCTTTTGAAGAAATAAGCAGGAAATATTTGTACATTTATATACGATCCAGCACCTTTTCATCCCGCACTACTTCCTTGTAACAAATGTTGCAACATTCACTGATACCAAACCTCTTCTGTCAGTACACAAATTAAAATTCTTTCAGAGGCTGACAGAACTCTTGAACTGTTCCCTTCAGCCACCTGTGTATTGCCCAATCCTCTTTTTCAGTGAACTCCTTTCTTCCCTTTTACTTCAACACATTTTAGCTATCTCCCCTTAAACTGTTCAGTCTCATACTTTACCTATAGTTGGTCTGCAAAGACAGACTAGCCATGGGTCACAGGATAAGTAACAGATTGATCTCCATCTATTTTTCCTGTCTCCACAGCTGGATAAAGGCACAGCACCTCTAGCAGGAACAAATGGAGAAACGACCATACAAGGCAAGAAGAGATCTAAATATGATCATGATTGGTAAAATGAAAGCCCTCCCCATAAAGAACTGCTTGCAGTGAAGCACTGTTCTTTCATCTACAGGGCTGGATGGACTGGCTGAGCGCTGCGCCCAGTACAAGAAAGATGGTGCTGACTTTGGCAAGTGGCGGGCAGTGCTGAAGATCACCAGTACAACTCCATCTCAGCTCGCTATCCAGGAGAATGCTAACACACTTGCACGCTATGCCAGCATCTGCCAGCAGGTATGTACTGTCCATAAGTCTTTCTTGAGATGCTGCTAACCATTTCTCATTGTTTCCTCCAAAGAAGAGCAAGAATGAGCAGCCAGACTGCAATCAGGATACTATCAGTGTGAGCAGGTTTTTTTTCCACATCAGCAAAGATTTTTCTGTTTTTCTTTCCTTAGCATGGGTTGGTGCCCATTGTAGAACCAGAAATCTTGCCTGATGGAGACCATGATCTCCAGCGTTGTCAGTATGTGACAGAAAAGGTAAGCCACCTTACTACGCTCCTCCCACAAAATCAGTCATTTATCTAGTGTAGAGTTTGCATTCACAGGTCTTAGAAGGGTTTGACCAAAAAAATACTTCCTCACTGCAACGCAGAAATGAGACACTCACAAATGATGATTTCATAAAAAAAAAAAAAAAAAAAAAAAGACTAGCATTCTAGTTTCATGTCCTCTGGATGCCAATTGAATCTCTGTTAGAGGCATCTCAAAAGATTCATGGGAAGTAAAATTATCTACCTTTTCTCTGTACCCGTATTCATCAAATCCAAGAAATATAAAGAGTAACTTAGTCATCCCAAAAGCAGTAGTATTTCCAGGGCTGCACTAGTGCCCTCTGATAAACTTCAGGAGAAAGAGAAGTTCCGTTTGATCTTCTCTCCACAACCTCAGCAATAATTCCACAATAGGCTGAGCACACTGCAGGTGAGAATTAGATGAGTCTCAGTATGTGAAGATCTCTGAGGCATGGGTCAGAGATCTGATATCTGAGCATATTGATATCATGGGTCTATATTTAATTCCCCTGTTCTCAGGTTCTGGCTGCTGTATACAAGGCCTTGAATGATCACCATGTCTACTTGGAAGGGACACTGCTGAAACCCAACATGGTAACAGCTGGACATTCCTGCCCGAAGAAGTACACCCCTCAGGATGTAGCCATAGCAACTGTCACTACTCTCCTGCGTACTGTTCCTGCTGCTGTGCCCGGTGATTACCAGTTTATTACTATGTATTGTGTACTATCTATGTATCAAACCATCACACTCTCAGTCTCATTGGCCATGCTCCTAAACTCATTGTTCTGGCACATAAGGATCAGGGGCTGTGATAGCTGCAGCACTCAGCGTCTTCCCTTTCTTATTGCAGGTATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACCTAAATGCCATGAAT\n>Anas\nAAAAAGGCATTGTGGTGGGAATAAAAGTGAGTATCTGTACATGTGTGGGGTCTATACTCACTCCCAACAACAACTTTTGTTTGTTTTTTTTCGGTTTTGAAATCCCTAGAATGTCTCTGCTACCATTCTCTGCATTGCTTTTGTACAACTAAACAGTGAAACATTTGCAACCGATGCAGGACCCTTTTGTCCAACAGCACCCATATATTTACCATTCACTGCAGTTACATCCTTCCATGCAATAACCTAATTAAATCCTTTCTGCAGCTGACAGAGCTGTTGATCTACTCCCCACAGCCACCTGCATATTGCCCCCATGACCCAATTCTCTCCTGTTCCTCCCCTTTACTGGAGCCCTTCCCTTCCTTCCACTAGCAGTCTGTTCAGCCCTATACTTTACTCACAGTTAATCTGCAAAGGTAGACTAGCTCTGGGGTGCAAGGCTCAGGCTGACCTCCCTCACTCTGTAACTCTTTCTGTTTCTGCTGTCTCTTCAGCTGGATAAAGGCACATCGCCCCTAGCAGGAACAAATGGAGAAACCACCATCGAAGGTAAGGAGAGATCTAAGAAGCCTTAGCTATGACTAGTGAAAGTCATGGGGTGACTCAACAGGAGTTGCAGCCTTGGCTGGTGTCATGGTACTTTTCAGAGTTATTTCTGAAAGAGCTGTTCTCACTGAAGCTCTGTTCTTTCACATGCAGGACTGGATGGACTGTCTGAGCGCTGCGCCCAGTACAAGAAAGATGGTGTTGACTTTGGCAAGTGGCGTGCAGTGTTGAAGATCACCAGCACAACACCCTCTCAACTTGCCATCCAAGAGAATGCCAACACACTGGCACGCTATGCCAGCATCTGCCAGCAGGTATCTACCCTTCTGCAGCCTTCCTTGAGATGTTTTCGTCCCTTTTTCACTGTTCCCTCTGATAATAGACTAGGTATTGTGAACAGTGGATCTCTGTGAGGGTCTTGGGAAATGTGGAGAAAGGGCAGTGCAGAAAGAAGGCATGTCACCAGAGACAATACAGACAGCCAGGACAGTTTTTCTTTCCCACCTCCAAAAACTTCCTTGTTTTTCCTTCCTTAGAATGGCTTGGTGCCCATTGTGGAGCCAGAAGTCTTACCTGATGGAGACCACGATCTCCAGCGCTGCCAGTATGTCACAGAAAAGGTAAGATTCTTGATCTCTGCACCCTCACAAATCAGTAGTTAATCTTATGCAGGGTTTGCATTGACAGATTTCAATGAGTTTTGACCAAAAAGGTCCTTCATAACTGTATCACAGAAATGGGTCACTCATAGTCAAATAATTAGCTAGTAGCAAATGTGAGAGCAGAATCCCTGTTTTTGGATTTCCAGTCAAACTGTCAATATAAGCATTCCTGAGCTGAAAAGGATACATTGGTTATAAAGGCATTTATTCCTTGTTCAGTATGTCAGTTTGTAAGGACAAATCCAATAAAAAAGGAAAATGTCCTAGTCATCACAAAAGCATCGGTGCCTCCAGGGCTGCAACCCCTGTGACAAATTTCAAGAAATTTAGTTTGATCTTCTCCCACTTCCAAGGAATTAGCTGTCTCTCCACAGTAGGCTGAGGTAAAGCATTGAGCACAGATGTGTATTCAATCCTCCTATTCGCTCCCCCAGGTTCTGGCTGCTGTCTACAAGGCCTTGAACGATCATCATGTCTACCTGGAGGGGACATTGCTGAAACCCAACATGGTGACAGCCGGGCATGCCTGCACCAAAAAATACACCCCTCAGGATGTAGCTGCAGCAACCGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTTCCTGGTGATTCTTGATTTGTTCCCATATATCCCTTCACACTGTCACTCCTACTGGCCTTGCTCCTCCATCTGACATGCTCATTTCTCTGGCACACAGAGGTCAGAGATGGTGGCTTGGCGGCTGGAGCGCCCCAGTTTCTAAGTCCTGAGGTCTCTTTCTTTCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACCTGAATGCTATGAAT\n>Corvus\nCCATCCAAGGTAAGGAGAGATCTAAGGAGCCTAAGCTAAGGCCCAGCAAAAGCCATAGGGTGACTCACCTGAGACGCAGCCTTGGCTGGAGTCATGGGACTTTGCAGAGTTCTGTGCTGAAGAGCAGCTCTCAGTGAAGCACTGTTCTCCCTCTGCAGGGCTGGATGGGCTGGCTGAACGCTGTGCCCAGTACAAAAAAGATGGTGCTGACTTTGCTAAGTGGCGTGCAGTGCTGAAGATCACCAGCACAACACCCTCTCAGCTTGCCATCCAGGAGAACGCCAACACGTTGGCGCGCTATGCCAGCATCTGCCAGCAGGTACCTCCCCTCCAGCAACCTCTCCTGAGATGCTGCTGCCCCTTCTCACTGTTCCCTAGCATGTGATAACATGCTAGGTAGTTCGAAAGGAGAATCCCCGTGAGGGTTTTGGGGAAGACAAGGAGGAAGGGCAGTGCAGCATAAAGGAATGCCACTAAACTCAGGGCAAACAACAAGAACAGTTTTACTTCCATAGCTCTAAAGAATCCCCTGTCTTCCTTTTCCTAGCATGGCTTGGTGCCCATTGTGGAGCCAGAAATCCTGCCTGATGGAGACCATGATCTCCAGCGCTGTCAGTATGTCACAGAGAAGGTAAGAGATTCCTCCCTCTGTCCTCCCCCTCACAAATCAGCAGCTAAACTTTGTGCAGTTTGTGCTCACAGATCTCAAAGAAGTTTGACCAAAAATGTACTTCATAACTGCATCACAGAAATCAGCTGCTCCTAGGCAAATAGCAAACTAATAGAAAATCCACGAGTATTTTCCATGTGTTTGGATTTTTATTTCAATGGCAATATAAGCACTCTCAATCTCAAGAAGAGGTATCAGGACCAAACCCAATTACCTCAATTTCAGTACCTCAGTTGGCAAGGACAAATCCTGTAAATATGAACAATTGTATTATTGGTCATCTCAAAAGCAGTGGGGTCTCCACAACTGCAATCCCRGAGATAAATTTCATGAGAAAGCAAAATTCAACTAGATCTTGCTGCAGTACCAAAGAATAAACTGTCTTTCCACAGCAGGCTGAGGTGAAGATCTGAGCAGAGGTCTGTATTCATTCCTCCTGTTTTCAAGGTTCTGGCTGCTGTCTACAAGGCTTTGAATGATCACCACGTGTACCTGGAAGGGACACTGCTGAAACCCAACATGGTGACGGCTGGGCATTCCTGCTCCAAGAAGTACACCCCTCAGGATATAGCCATAGCAACTGTCACTACTCTCCTCCGCACTGTTCCTGCTGCTGTTCCTGGTGATTCCTGATTCACTCCTRTCTCTTCATTCCCACTCTCTCTCCCACCTCTGACATGTCTGCTCCTCTGGCACCTAAAGGTGAGGGACTGAGGTAGCTGGAACACTCTGTTTCTAAGCCTTGAAACCTCTGTCTTACAGGAATCTGCTTCCTGTCTGGAGGTCAGAGTGAAGAGGAGGCTTCTGTCAACCTGAATGCCATGAAT\n>Pterocnemia\nAAAAAGGCATTGTGGTGGGAATAAAGGTGAGTGTCTGTACATGTGTCTGGCTGGCACAATACTCTAAACACTATTTCCAATAAGAACTATAATATAGGGGCTGCACTCTCCCTTGTAGACCAGTATTTTGCTTGTTTCTGAAAATACCTAGAGGATCTCTGCCCCCATTCTCTGTATAGTTTTTGTACAAATATCCAGGACACATTTGTGCATTTACATATAATCCAGGACCTTTTCATCCAGCAAACGATGTACTTCCTTGTACGAATGTTACATCACACACTGAAATTAAACCTCTTCTCTCAGTACACAAACTAAAATCCTTTCTGAGTCTGACAGAACTCTTGAGCTGTTCCCTGCAGCCATCTGCATATTATCTGATCCTCTTACCCATTTCACTCCTTTCTTTCTCCTTTTCTTTAACACTTCTCAGATATGTCCCTTTAGCCTATTAAGTCCAATACTTTACCCACGGTTTGTTTGCAAAGACAGACTAGTCATAGGTCACAAGATAAGTAACAGATTGATCTCCATGTATTTTTCCTGTCTCCACAGTTGGATAAAGGCACAGCACCTCTAGGAGGAACAAATGGAGAAACTACCATACAAGGCAAGGAGAGATCTAAGTAGCCATAATTATGATTGGTAAAGTGAAAGCCATCAGATGACTAAACTCGTTCACAGCCTTAGCTGGTGTCATGTTACATTTCATGTTGAAAGCACTAAGTTCAGCTTTCCCATAAAGAACTGCTGTCAGTGAAGCACTGTTCTTTCATCTGCAGGACTGGATGGACTGGCTGAGCGCTGTGCCCAGTACAAGAAAGATGGTGTTGACTTTGGCAAATGGCGTGCAGTGCTGAAGATAACCAGCACAACTCCCTCTCAACTTGCTATCCAGGAGAATGCTAACACACTAGCACGCTATGCCAGCATCTGCCAGCAGGTATCTACCCTCTACTAATCTTTCCTGAGATGTTGTTACTGTTTCTTATTGTTTCCTGTGATAACAGCTAGATATTTTGAAAGATCAGTCCCTGTGAGAGGTTTCAGAGACAATGAAGAAGAAGAGCCATACAGCAAGAAGGAATACTATCAATGTTGGGRAAGACAGGAAGGACAGTTTTTCTGCCACATCTGCAAAGACTTTCCTGTTTTTCTTTCCTTAGCATGGATTGGTGCCCATTGTGGAGCCAGAAATCTTGCCTGATGGAGATCATGATCTCCAACGTTGTCAGTATGTCACAGAAAAG\n>Crypturellus\nGATCTAGTGCAGAGTTTGCATTCACAGATCTTATCGGGTTTTAACCAACAAAATACTTTATAACTAAACCACAGAAGTGACATGCTTACAAATGATTTANCAGAAACCAAGAGACTAGAATTTTAGCTGTTTGTCTTTTGGATGCCAAATTGAATCAGTTAAAAGCATCTCACAAAGATTAATGGGGAGTAAAATTATCTACCTCTTCCTCTGTATCCCTGTCCACAAAGAAATCCAAGAAACATACAGAGTATCTTAGCCATGCCAAAAGCAGTAGTATCTCCAGGGCTGCACTAGTGACCCCTGTGATAAACTTCAGGAAAAAGGGAAGTTGTTTGATCTTCTCTCCACACTCTCAAGCAATATGCTGTCTTTCCACAACAGGCTGAGCACACTGCATGTGAGAATTAGATGAGCCTCAGATGTCAAGATTTCTGAGGCATGGGTGGGAGATCTGAAATCTGAGCATACTGAGATCATGAGTCTATATTTAATCTTCCTGTTTTCAGGTTTTGGCTGCTGTCTACAAGGCCTTGAATGATCACCATGTCTACTTGGAAGGGACACTGCTGAAACCAAACATGGTGACAGCTGGGCATTCCTGCCCCAAGAAATACACCCCTCAGGATGTAGCAGTAGCAACTGTCACTACTCTCCTGCGTACTGTTCCTGCTGCTGTGCCTGGTGATTCCCTCTGTATTACTATATAGCCATTACTATGTATCAAACCATCACACTATCACTCTCACTGGCCTCGCTCCTAGCTCCTAAACTCACTGCTCTAGCACGTAAGGGTCAGGGGCTGTGGTGGCTGCAGCACTCAGCTTCTACCCTTTGCTATTGCAGGAATCTGCTTCCTGTCTGGAGGTCAAAGTGAAGAGGAGGCTTCTCTCAACTTAAATGCCATGAAT\n' + if not check_individual_results(cm, t): + res = False + print_success(res) + return res + elif name == "pxsstat": + cm = "./pxsstat -s TEST/Bollback_2002_MBE.fa" + t = '-18.867\n' + elif name == "pxstrec": + cm = "./pxstrec -t TEST/test.strec.tre -d TEST/test.data.narrow -c TEST/test.conf | tail -1" + t = '0.316161 \n' + elif name == "pxsw": + cm = "./pxsw -s TEST/test.fa | grep TaxonA | grep TaxonB" + t = 'TaxonA\tTaxonB\t40\n' + + # do standard nvanilla nexus, and one with translation table, and one with quotes labels + elif name == "pxt2new": + cm = "./pxt2new -t TEST/test_nexus.tre" + t = '(((TaxonA:0.1,TaxonB:0.03):0.125,TaxonC:0.25):0.4,(TaxonD:0.23,TaxonE:0.16):0.3);\n' + elif name == "pxt2nex": + cm = "./pxt2nex -t TEST/collapse.tre" + t = '#NEXUS\nBegin trees;\ntree tree0 = [&R] (((TaxonA:0.1,TaxonB:0.03)0.43:0.125,TaxonC:0.25)1.0:0.4,(TaxonD:0.23,TaxonE:0.16)0.94:0.3);\nend;\n' + + elif name == "pxtgen": + res = True + print("unrooted ", end = '') + cm = "./pxtgen -n 5" + t = '(t2,t3,(t4,(t1,t5)));\n(t3,(t1,t4),(t2,t5));\n(t2,(t1,t4),(t3,t5));\n(t2,t3,(t1,(t4,t5)));\n(t2,t3,((t1,t4),t5));\n(t3,(t2,t4),(t1,t5));\n(t1,t3,(t4,(t2,t5)));\n(t1,(t2,t4),(t3,t5));\n(t1,t3,(t2,(t4,t5)));\n(t1,t3,((t2,t4),t5));\n(t2,(t3,t4),(t1,t5));\n(t1,(t3,t4),(t2,t5));\n(t1,t2,(t4,(t3,t5)));\n(t1,t2,(t3,(t4,t5)));\n(t1,t2,((t3,t4),t5));\n' + if not check_individual_results(cm, t): + res = False + print("rooted ", end = '') + cm = "./pxtgen -n 4 -r" + t = '(t2,(t3,(t1,t4)));\n((t1,t3),(t2,t4));\n(t2,(t1,(t3,t4)));\n(t2,((t1,t3),t4));\n(t4,(t2,(t1,t3)));\n((t2,t3),(t1,t4));\n(t1,(t3,(t2,t4)));\n(t1,(t2,(t3,t4)));\n(t1,((t2,t3),t4));\n(t4,(t1,(t2,t3)));\n(t3,(t2,(t1,t4)));\n(t3,(t1,(t2,t4)));\n((t1,t2),(t3,t4));\n(t3,((t1,t2),t4));\n(t4,(t3,(t1,t2)));\n' + if not check_individual_results(cm, t): + res = False + print("prefix label ", end = '') + cm = "./pxtgen -n 3 -r -l taxon" + t = '(taxon2,(taxon1,taxon3));\n(taxon1,(taxon2,taxon3));\n(taxon3,(taxon1,taxon2));\n' + if not check_individual_results(cm, t): + res = False + print_success(res) + return res + elif name == "pxtlate": + res = True + print("standard ", end = '') + cm = "./pxtlate -s TEST/trlateTest.fa" + t = '>Dendroica_kirtlandii\nMPQLNPTP*FFIMLTS*LTFSLIIQPKLLSFVSINPPSNKPSIAPTTTP*T*P*T*\n>Cardellina_canadensis\nMPQLNPSP*FFIMLTS*LTFSLIIQPKLLSFVSTNPPSNKPPIAPSTTP*T*P*T*\n>Geothlypis_tolmiei\nMPQLNPSP*FFIMLTS*FTFSLIIQPKLLSFVSINPPSSKPRITPNTTP*A*P*T*\n>Dendroica_coronata\nMPQLNPNP*FFIMLTS*LTFSLIIQPKLLSFVSINPPSSKPPIAPTTTP*T*P*T*\n>Leiothlypis_celata\nMPQLNPSP*FFIMLTS*LTFSLIIQPKLLSFVSINPPSSKPPIAPSTTP*T*P*T*\n' + if not check_individual_results(cm, t): + res = False + print("vert mtDNA ", end = '') + cm = "./pxtlate -s TEST/trlateTest.fa -t vmt" + t = '>Dendroica_kirtlandii\nMPQLNPTPWFFIMLTSWLTFSLIIQPKLLSFVSMNPPSNKPSIAPTTTPWTWPWT*\n>Cardellina_canadensis\nMPQLNPSPWFFIMLTSWLTFSLIIQPKLLSFVSTNPPSNKPPIAPSTTPWTWPWT*\n>Geothlypis_tolmiei\nMPQLNPSPWFFIMLTSWFTFSLIIQPKLLSFVSMNPPSSKPRITPNTTPWAWPWT*\n>Dendroica_coronata\nMPQLNPNPWFFIMLTSWLTFSLIIQPKLLSFVSMNPPSSKPPIAPTTTPWTWPWT*\n>Leiothlypis_celata\nMPQLNPSPWFFIMLTSWLTFSLIIQPKLLSFVSMNPPSSKPPIAPSTTPWTWPWT*\n' + if not check_individual_results(cm, t): + res = False + print_success(res) + return res + elif name == "pxtrt": + cm = "./pxtrt -t TEST/yule_100taxa.tre -n taxon_1,taxon_2,taxon_3,taxon_5,taxon_8,taxon_13,taxon_21,taxon_34,taxon_55,taxon_89" + t = '((((taxon_1:0.6982661782487307,taxon_2:0.6982661782487307):1.6249815565818162,(((taxon_3:1.312206397223513,(taxon_5:0.9561412887678671,taxon_8:0.9561412887678671):0.3560651084556459):0.4159628031666056,taxon_13:1.7281692003901186):0.4425292521420627,taxon_21:2.1706984525321813):0.1525492822983656):0.645808102187384,taxon_34:2.969055837017931):2.0856420237227193,(taxon_55:3.3233579219493956,taxon_89:3.3233579219493956):1.7313399387912545);\n' + elif name == "pxtscale": + res = True + print("scale ", end = '') + cm = "./pxtscale -t TEST/test.tre -s 10" + t = '(((TaxonA:1,TaxonB:0.3):1.25,TaxonC:2.5):4,(TaxonD:2.3000000000000003,TaxonE:1.6000000000000001):3);\n' + if not check_individual_results(cm, t): + res = False + print("root height ", end = '') + cm = "./pxtscale -t TEST/ultra_100.tre -r 65.5" + t = '((((s1:13.553573187430807,s2:13.553573187430807):33.7331074035328058,s3:47.2866805796801017):15.8252934960289391,(((s4:4.4770404482656234,s5:4.4770404482656234):0.956905971316084,s6:5.4339464210861745):28.7640659957904852,s7:34.1980124168766579):28.9139616701158921):2.3880259130074513,((s8:11.6855353596727642,s9:11.6855353596727642):3.8796767729292201,s10:15.5652121326019852):49.9347878666457774);\n' + if not check_individual_results(cm, t): + res = False + print_success(res) + return res + elif name == "pxupgma": + cm = "./pxupgma -s TEST/protein_matrices/AA_5tax_interleaved.NEX" + t = '(((TaxonB:0.068,TaxonA:0.068):0.108,TaxonC:0.176):0.171,(TaxonE:0.164,TaxonD:0.164):0.183);\n' + elif name == "pxvcf2fa": + cm = "./pxvcf2fa -s TEST/vcf_file" + t = '>APC1\nCACCCCATTCTCGCATCATCCAACGCCCACGAAGCATTATGACCGGTACGCGCCCTGGTCGCCGCGGGCGTCGACCCCC\n>APC2\nCGCCCCATTCTCGCATCATCCAACGCCCACGAAGCATTAGGACCGGTACGCGCCCTGGTCGCCGCGGGCGCCAACCCCC\n>GPC1\nCGCCCCCTTCTCGCACCATCCAACGCCCACGAAGCATTAGGACCGGTACGCGCCCTGGTCGCCTCGGGCGCCAACCCCC\n>GPC2\nCGCCCCCTTCTCGCACCACCCAACGCCCACGAAGCATTATGACCGGTACGCGCCCTGGTCGCCGCGGGCGCCAACCCCC\n>GPC3\nCACCCCCTTCTCGCACCATCCAACGCCCACGAAGCATTATGACCGGTACGCGCCCTGGTCGCCGCGGGCGCCGACCCCC\n>GPCREF\nCGCCCCCTTCTCGCACCATCCAACGCCCACGAAGCATTATGACCGGTACGCGCCCTGGTCGCCGCGGGCGCCGACCCCC\n>HH1\nCACCCCCTTCTCGCATCATCCAACGCCCACGAAGCATTAGGACCGGTACGCGCCCTGGTCGCCGCGGGCGCCAACCCCC\n>HH2\nCACCCCCTTCTCGCATCACCCAACGCCCACGAAGCATTAGGACCGGTACGCGCCCTGGTCGCCGCGGGCGCCAACCCCC\n>HH3\nCACCCCCTTCTCGCATCACCCAACGCCCACGAAGTATTAGGACCGGTACGCGCCCTGGTCGCCGCGGGCGCCAACCCCC\n>HH4\nCACCCCCTTCTCGCACCATCCAACGCCCACGAAGCATTATGACCGGTACGCGTCCTGGTCGCCGCGGGCGCCAACCCCC\n>HH5\nCACCTCCTTCTCGCATCACCCAACGCCCACGAAGCATTAGGACCGGTACGCGCCCTGGTCGCCGCGGGCGCCAACCCCC\n>LPC1\nCGCCCCATTCTCGCACCATCCAACGCCCACGAGGTATTATGACCGGTACGCGCCCTGGTCGCCTCGGGCGCCAGCCCCC\n>LPC2\nCGCCCCATTCTCGCACCACCCAACGCCCACGAAGCATTAGGACCGGTACGCGCCCTGGTCGCCGCGGGCGCCAACCCCC\n>QHH1\nCACTTCCTTCTCGCTCCGTCCGACATCTACGGAGCATCGTGACTGGCACACGTCCTGATCGCTTCAGACGCTAACCCCT\n>QHH2\nTGCCCCCTTCTCACACTATCTAATGTTCACAAAGCACTAGAACCGGTACGCGCCTTGGTCACCGTGAGCGCCGACTTCC\n>QHH3\nCACCCTCCTCTCGCATCATCCAACGCCCACGAAGTATTAGGACCGGTCCGCGCCCTAGTCGCCGCGGGTGCCAACCCTC\n>QHH4\nCGTCCCCTTTTCGCACCATTCAACGCCCACGAAACATTAGGATCGGTATGTGCCCTGGCTGCCGCGGGCACCAATCCCC\n>STG1\nCGCCCCCTCCTCGCACCATCCAACGCCCATGAAGTATCATGACCGGTACGCACCCTGGTCGCCTCGGGCGCCAACCCCC\n>STG2\nCGCCCCCTCCTCGCACCATCCAACGCCCGTGAAGCATCGTGACCGGTACGCGCCCTGGTCGCCGCGGGCGCCAACCCCC\n>GNNSN\nCGCCCCCTTCCAGTACCATCCAGCGCCCACGAAGCGTTATGGCCAATACGCGCTCCGGTCGTCGCGGGCGCCGACCCCC\n' + else: + return + p = subprocess.Popen(cm, shell=True, stdout=subprocess.PIPE) + x = p.communicate() + #print(x) + x = x[0].lstrip().decode("utf-8") + if x == t: + print(bcolors.OKBLUE + "PASSED" + bcolors.ENDC) + global pass_count + pass_count += 1 + return True + else: + for i,j in zip(x,t): + print(i, j, i == j) + print(bcolors.FAIL + "FAILED" + bcolors.ENDC) + print("intended output:\n", t) + print("your output:\n", x) + global fail_count + fail_count += 1 + return False + +# this are skipped in the testing because they are preliminary, tests will +# be added as they become more permanent. +notest = ["pxnni"] +# (for now) ignore tests that fail due to random numbers +ignore = ["pxbdsim", "pxboot", "pxpoly"] + +if __name__ == "__main__": + dir = "." # by default test non-installed programs + if len(sys.argv) == 2: + dir = sys.argv[1] + print("guess you want to test in: " + dir) + elif len(sys.argv) > 2: + print("python run_tests.py [program directory]") + sys.exit(0) + + passed = 0 + failed = 0 + failedl = [] + skipped = 0 + ignorefailed = 0 + ignorefailedl = [] + print("=================") + for i in sorted(os.listdir(dir)): + if i[:2] == "px": + if i in notest: + print(bcolors.WARNING + "skipping " + i + bcolors.ENDC) + skipped += 1 + continue + t = test_program(i) + if t == True: + passed += 1 + elif t == False: + if i in ignore: + ignorefailed += 1 + ignorefailedl.append(i) + else: + failed += 1 + failedl.append(i) + else: + print(bcolors.WARNING + "no test for " + i + bcolors.ENDC) + skipped += 1 + print("=================") + print("PASSED PROGRAMS: " + str(passed) + " (" + str(pass_count) + " tests)") + print("FAILED PROGRAMS: " + str(failed) + " (" + str(fail_count) + " tests)") + print("PROGRAMS WITHOUT TESTS: " + str(skipped)) + if ignorefailed > 0: + print("The following programs had anticipated failures (random numbers):") + print("\t",",".join(ignorefailedl)) + if failed > 0: + print("These failed:") + print("\t",",".join(failedl)) + sys.exit(1) + else: + sys.exit(0) diff --git a/src/seq_gen.cpp b/src/seq_gen.cpp new file mode 100644 index 0000000..75dcf58 --- /dev/null +++ b/src/seq_gen.cpp @@ -0,0 +1,574 @@ +#include +#include +#include +#include +#include +#include +#include + +//using namespace arma; // do we want this? +using arma::randn; +using arma::mat; +using arma::expmat; + +#include "seq_gen.h" +#include "utils.h" +#include "node.h" +#include "tree.h" +#include "tree_reader.h" +#include "tree_utils.h" + + +std::string SequenceGenerator::nucleotides_ = "ACGT"; +std::string SequenceGenerator::amino_acids_ = "ARNDCQEGHILKMFPSTWYV"; + + +// TODO: do we want this order? +/*Default Rate Matrix looks like this, I don't know why but I always go A,T,C,G + * + * A T C G + * A -1 .33 .33 .33 + * T .33 -1 .33 .33 + * G .33 .33 -1 .33 + * G .33 .33 .33 -1 + */ + + +// this should enable easy changing of order, if desired +std::map SequenceGenerator::nuc_map_ = { + {'A', 0}, + {'C', 1}, + {'G', 2}, + {'T', 3} +}; + + +std::map SequenceGenerator::aa_map_ = { + {'A', 0}, + {'R', 1}, + {'N', 2}, + {'D', 3}, + {'C', 4}, + {'Q', 5}, + {'E', 6}, + {'G', 7}, + {'H', 8}, + {'I', 9}, + {'L', 10}, + {'K', 11}, + {'M', 12}, + {'F', 13}, + {'P', 14}, + {'S', 15}, + {'T', 16}, + {'W', 17}, + {'Y', 18}, + {'V', 19} +}; + + +/* +std::map SequenceGenerator::nucMap = { + {'A', 0}, + {'T', 1}, + {'C', 2}, + {'G', 3} +}; +string SequenceGenerator::nucleotides = "ATCG"; +*/ + + +SequenceGenerator::SequenceGenerator (const unsigned int& seqlength, + const std::vector& basefreq, std::vector< std::vector >& rmatrix, + Tree * tree, const bool& showancs, const int& nreps, const long int& seed, + const float& alpha, const float& pinvar, const std::string& ancseq, + const bool& printpost, const std::vector& multirates, + const std::vector& aabasefreq, const bool& is_dna):tree_(tree), + seqlen_(seqlength), nreps_(nreps), seed_(seed), alpha_(alpha), + pinvar_(pinvar), root_sequence_(ancseq), base_freqs_(basefreq), + aa_freqs_(aabasefreq), rmatrix_(rmatrix), multi_rates_(multirates), + show_ancs_(showancs), print_node_labels_(printpost), multi_model_(false), + is_dna_(is_dna) { + /* + for (unsigned int i = 0; i < rmatrix.size(); i++) { + for (unsigned int j = 0; j < rmatrix.size(); j++) { + std::cout << rmatrix[i][j] << " "; + } + std::cout << std::endl; + }*/ + initialize(); + if (is_dna_) { + nstates_ = 4; + } else { + nstates_ = 20; + } + // Print out the nodes names + if (print_node_labels_) { + label_internal_nodes(); + print_node_labels(); + exit(0); + } + preorder_tree_traversal(); +} + + +// set all values +void SequenceGenerator::initialize () { + // set the number generator being used + if (seed_ != -1) { // user provided seed + generator_ = std::mt19937(seed_); + } else { + generator_ = std::mt19937(get_clock_seed()); + } + + // construct uniform distribution from which random numbers will be generated + // this happens to be the default distribution, but good to be explicit + uniformDistrib_ = std::uniform_real_distribution(0.0, 1.0); + + // construct gamma distribution (if necessary) + if (alpha_ != -1.0) { + gammaDistrib_ = std::gamma_distribution(alpha_, (1/alpha_)); + } + + if (show_ancs_) { + label_internal_nodes(); + } + if (root_sequence_.length() == 0) { + root_sequence_ = generate_random_sequence(); + } else { + check_valid_sequence(); + // if root sequence is provided, set length to this + seqlen_ = root_sequence_.size(); + } + // set site-specific rate (pinvar and gamma) + site_rates_ = set_site_rates(); + + if (multi_rates_.size() != 0) { + multi_model_ = true; + } +} + + +/* Use the P matrix probabilities and randomly draw numbers to see + * if each individual state will undergo some type of change + */ +std::string SequenceGenerator::simulate_sequence (const std::string& anc, + std::vector< std::vector >& QMatrix, const float& brlength) { + std::vector::iterator low; + std::vector< std::vector > PMatrix(nstates_, std::vector(nstates_, 0.0)); + //int ancChar = 0; + std::string newstring = anc; // instead of building, set size and replace + for (unsigned int i = 0; i < seqlen_; i++) { + float RandNumb = get_uniform_random_deviate(); + int ancChar = 0; + if (is_dna_) { + ancChar = nuc_map_[anc[i]]; + } else { + ancChar = aa_map_[anc[i]]; + //std::cout << ancChar << std::endl; + } + float brnew = brlength * site_rates_[i]; + PMatrix = calculate_p_matrix(QMatrix, brnew); + for (int i = 0; i < nstates_; i++) { + // this calculates a cumulative sum + std::partial_sum(PMatrix[i].begin(), PMatrix[i].end(), PMatrix[i].begin(), std::plus()); + } + low = std::lower_bound (PMatrix[ancChar].begin(), PMatrix[ancChar].end(), RandNumb); + + if (is_dna_) { + newstring[i] = nucleotides_[low - PMatrix[ancChar].begin()]; + } else { + newstring[i] = amino_acids_[low - PMatrix[ancChar].begin()]; + } + } + //std::cout << newstring << std::endl; + return newstring; +} + + +/* + * Calculate the Q Matrix (Substitution rate matrix) + */ +std::vector< std::vector > SequenceGenerator::calculate_q_matrix () { + std::vector< std::vector > bigpi(nstates_, std::vector(nstates_, 1.0)); + std::vector< std::vector > t(nstates_, std::vector(nstates_, 0.0)); + + double tscale = 0.0; + + // doing the same looping multiple times here. simplify? + for (unsigned int i = 0; i < rmatrix_.size(); i++) { + for (unsigned int j = 0; j < rmatrix_.size(); j++) { + if (i != j) { + if (is_dna_) { + bigpi[i][j] *= base_freqs_[i] * base_freqs_[j] * rmatrix_[i][j]; + } else { + bigpi[i][j] *= aa_freqs_[i] * aa_freqs_[j] * rmatrix_[i][j]; + } + tscale += bigpi[i][j]; + } else { + bigpi[i][j] = 0.0; + } + } + } + for (unsigned int i = 0; i < rmatrix_.size(); i++) { + for (unsigned int j = 0; j < rmatrix_.size(); j++) { + if (i != j) { + bigpi[i][j] /= tscale; + } else { + // set the diagnols to zero *** are they not set to zero above? + bigpi[i][j] = 0.0; + } + } + } + for (unsigned int i = 0; i < rmatrix_.size(); i++) { + double diag = 0.0; + for (unsigned int j = 0; j < rmatrix_.size(); j++) { + if (i != j) { + diag -= bigpi[i][j]; + } + } + bigpi[i][i] = diag; + } + //Divide and Transpose + for (unsigned int i = 0; i < rmatrix_.size(); i++) { + for (unsigned int j = 0; j < rmatrix_.size(); j++) { + if (is_dna_) { + bigpi[i][j] /= base_freqs_[i]; + } else { + bigpi[i][j] /= aa_freqs_[i]; + } + } + } + return bigpi; +} + + +/* Calculate the P Matrix (Probability Matrix) + * Changes to armadillos format then back I don't like the way could be more + * efficient but yeah... + */ +std::vector< std::vector > SequenceGenerator::calculate_p_matrix ( + const std::vector< std::vector >& QMatrix, float br) { + + std::vector< std::vector > Pmatrix(nstates_, std::vector(nstates_, 0.0)); + mat A = randn(nstates_, nstates_); + mat B = randn(nstates_, nstates_); // why not just copy A? + int count = 0; + //Q * t moved into Matrix form for armadillo + for (unsigned int i = 0; i < QMatrix.size(); i++) { + for (unsigned int j = 0; j < QMatrix.size(); j++) { + A[count] = (QMatrix[i][j] * br); + count++; + } + } + //exponentiate the matrix + B = expmat(A); + //std::cout << B << std::endl; + count = 0; + //convert the matrix back to C++ vector + for (unsigned int i = 0; i < Pmatrix.size(); i++) { + for (unsigned int j = 0; j < Pmatrix.size(); j++) { + Pmatrix[i][j] = B[count]; + count++; + } + } + return Pmatrix; +} + + +/* + * Pre-Order traversal works + * Calculates the JC Matrix + */ +// TODO: how to name ancestor nodes (sequences) +// - if we have this we can add to results (if desired)) +void SequenceGenerator::preorder_tree_traversal () { + int rate_count = 0; + int check = 0; + std::vector< std::vector > QMatrix(nstates_, std::vector(nstates_, 0.0)); + //vector< vector > PMatrix(4, vector(4, 0.0)); + // NOTE: this uses order: A,T,C,G + if (multi_model_) { + rmatrix_[0][2] = multi_rates_[0]; // A->C + rmatrix_[2][0] = multi_rates_[0]; // C->A + rmatrix_[0][3] = multi_rates_[1]; // A->G + rmatrix_[3][0] = multi_rates_[1]; // G->A + rmatrix_[0][1] = multi_rates_[2]; // A->T + rmatrix_[1][0] = multi_rates_[2]; // T->A + rmatrix_[2][3] = multi_rates_[3]; // C->G + rmatrix_[3][2] = multi_rates_[3]; // G->C + rmatrix_[1][2] = multi_rates_[4]; // C->T + rmatrix_[2][1] = multi_rates_[4]; // T->C + rmatrix_[1][3] = multi_rates_[5]; // G->T + rmatrix_[3][1] = multi_rates_[5]; // T->G + rmatrix_[0][0] = (multi_rates_[0]+multi_rates_[1]+multi_rates_[2]) * -1; + rmatrix_[1][1] = (multi_rates_[2]+multi_rates_[4]+multi_rates_[5]) * -1; + rmatrix_[2][2] = (multi_rates_[0]+multi_rates_[3]+multi_rates_[4]) * -1; + rmatrix_[3][3] = (multi_rates_[1]+multi_rates_[3]+multi_rates_[5]) * -1; + for (unsigned int i = 0; i < 6; i++) { + multi_rates_.erase (multi_rates_.begin() + 0); + } + //QMatrix = calcQmatrix(rate_matrix); + //QMatrix = calculate_q_matrix(); + } + QMatrix = calculate_q_matrix(); + Node * root = tree_->getRoot(); + seqs_[root] = root_sequence_; + ancq_[root] = QMatrix; + + if (show_ancs_) { + std::string tname = root->getName(); + Sequence seq(tname, root_sequence_); + res.push_back(seq); + } + + // Pre-Order Traverse the tree + for (int k = (tree_->getNodeCount() - 2); k >= 0; k--) { + double brlength = tree_->getNode(k)->getBL(); + /* + for (unsigned int i = 0; i < QMatrix.size(); i++) { + for (unsigned int j = 0; j < QMatrix.size(); j++) { + std::cout << QMatrix[i][j] << " "; + } + std::cout << st::endl; + } + std::cout << std::endl; + */ + if (multi_model_) { + check = (int)round(multi_rates_[0]); + //std::cout << check << " " << rate_count << std::endl; + if (tree_->getNode(k)->isInternal() && multi_rates_.size() != 0) { + if (check == rate_count) { + rmatrix_[0][2] = multi_rates_[1]; + rmatrix_[2][0] = multi_rates_[1]; + rmatrix_[0][3] = multi_rates_[2]; + rmatrix_[3][0] = multi_rates_[2]; + rmatrix_[0][1] = multi_rates_[3]; + rmatrix_[1][0] = multi_rates_[3]; + rmatrix_[2][3] = multi_rates_[4]; + rmatrix_[3][2] = multi_rates_[4]; + rmatrix_[1][2] = multi_rates_[5]; + rmatrix_[2][1] = multi_rates_[5]; + rmatrix_[1][3] = multi_rates_[6]; + rmatrix_[3][1] = multi_rates_[6]; + rmatrix_[0][0] = (multi_rates_[1]+multi_rates_[2]+multi_rates_[3]) * -1; + rmatrix_[1][1] = (multi_rates_[3]+multi_rates_[5]+multi_rates_[6]) * -1; + rmatrix_[2][2] = (multi_rates_[1]+multi_rates_[4]+multi_rates_[5]) * -1; + rmatrix_[3][3] = (multi_rates_[2]+multi_rates_[4]+multi_rates_[6]) * -1; + + for (unsigned int i = 0; i < 7; i++) { + multi_rates_.erase(multi_rates_.begin() + 0); + } + //std::cout << "Size " << multi_rates_.size() << std::endl; + //std::cout << multi_rates_[0] << std::endl; + /* + for (unsigned int i = 0; i < multi_rates_.size(); i++) { + std::cout << multi_rates_[i] << std::endl; + }*/ + } + rate_count++; + } + } + QMatrix = calculate_q_matrix(); + //PMatrix = calculate_p_matrix(QMatrix, brlength); + Node * dec = tree_->getNode(k); + Node * parent = tree_->getNode(k)->getParent(); + //ancq[dec] = QMatrix; + std::vector< std::vector > Qparent = ancq_[parent]; + std::string ancSeq = seqs_[parent]; + std::string decSeq = simulate_sequence(ancSeq, Qparent, brlength); + /* + for (unsigned int i = 0; i < Qparent.size(); i++) { + for (unsigned int j = 0; j < Qparent.size(); j++) { + std::cout << Qparent[i][j] << " "; + } + std::cout << "\n"; + } + std::cout << "\n";*/ + + seqs_[dec] = decSeq; + ancq_[dec] = QMatrix; // why store this? + if (show_ancs_ && tree_->getNode(k)->isInternal()) { + std::string tname = tree_->getNode(k)->getName(); + Sequence seq(tname, decSeq); + res.push_back(seq); + } + // If its a tip print the name and the sequence + if (tree_->getNode(k)->isInternal() != true) { + std::string tname = tree_->getNode(k)->getName(); + Sequence seq(tname, decSeq); + res.push_back(seq); + } + } +} + + +// this should probably be returned on its own +void SequenceGenerator::print_node_labels() { + std::cout << getNewickString(tree_) << std::endl; + //std::cout << tree_->getRoot()->getNewick(true) <<";" << std::endl; +} + + +void SequenceGenerator::label_internal_nodes() { + int count = 1; + std::string str = "Node"; + std::string nlabel; + Node * root = tree_->getRoot(); + root->setName("Node_0"); + for (int k = (tree_->getNodeCount() - 2); k >= 0; k--) { + if (tree_->getNode(k)->isInternal()) { + //std::cout << k << std::endl; + str = std::to_string(count); + nlabel = "Node_" + str; + tree_->getNode(k)->setName(nlabel); + count++; + } + } +} + + +// involves both gamma and pinvar +std::vector SequenceGenerator::set_site_rates () { + std::vector srates(seqlen_, 1.0); + // invariable sites + if (pinvar_ != 0.0) { + int numsample = seqlen_ * pinvar_ + 0.5; + // sample invariable sites + std::vector randsites = sample_without_replacement(seqlen_, numsample); + // must be a more elegant way of doing this + for (int i = 0; i < numsample; i++) { + srates[randsites[i]] = 0.0; + } + } + + // gamma-distributed rate variation. could explore other distributions... + if (alpha_ != -1.0) { // default i.e. no rate variation + for (unsigned int i = 0; i < seqlen_; i++) { + // want to skip over sites that are set to invariable + if (srates[i] != 0.0) { + srates[i] = get_gamma_random_deviate(alpha_); + } + } + } + return srates; +} + + +// initialized as string of length seqlength, all 'G' +std::string SequenceGenerator::generate_random_sequence () { + std::string ancseq(seqlen_, 'G'); + if (is_dna_) { + //string ancseq(seqlen, 'G'); + std::vector cumsum(4); + std::vector::iterator low; + // cumulative sum + std::partial_sum(base_freqs_.begin(), base_freqs_.end(), cumsum.begin(), std::plus()); + + for (unsigned int i = 0; i < seqlen_; i++) { + float RandNumb = get_uniform_random_deviate(); + low = std::lower_bound (cumsum.begin(), cumsum.end(), RandNumb); + ancseq[i] = nucleotides_[low - cumsum.begin()]; + } + } else { + //string ancseq(seqlen, 'G'); + std::vector cumsum(20); + std::vector::iterator low; + // cumulative sum + std::partial_sum(aa_freqs_.begin(), aa_freqs_.end(), cumsum.begin(), std::plus()); + + for (unsigned int i = 0; i < seqlen_; i++) { + float RandNumb = get_uniform_random_deviate(); + low = std::lower_bound(cumsum.begin(), cumsum.end(), RandNumb); + ancseq[i] = amino_acids_[low - cumsum.begin()]; + } + } + //std::cout << ancseq << std::endl; + return ancseq; +} + + +// rates are in order: A<->C,A<->G,A<->T,C<->G,C<->T,G<->T +// not used +/* +std::vector< std::vector > SequenceGenerator::construct_rate_matrix ( + const std::vector& rates) { + // initialize + std::vector< std::vector > ratemat(nstates_, std::vector(4, 0.33)); + + // planning ahead here for potential non-reversible matrices + if (rates.size() == 6) { + ratemat[0][1] = rates[0]; + ratemat[1][0] = rates[0]; + ratemat[0][2] = rates[1]; + ratemat[2][0] = rates[1]; + ratemat[0][3] = rates[2]; + ratemat[3][0] = rates[2]; + ratemat[1][2] = rates[3]; + ratemat[2][1] = rates[3]; + ratemat[1][3] = rates[4]; + ratemat[3][1] = rates[4]; + ratemat[2][3] = rates[5]; + ratemat[3][2] = rates[5]; + + ratemat[0][0] = (rates[0] + rates[1] + rates[2]) * -1; + ratemat[1][1] = (rates[0] + rates[3] + rates[4]) * -1; + ratemat[2][2] = (rates[1] + rates[3] + rates[5]) * -1; + ratemat[3][3] = (rates[2] + rates[4] + rates[5]) * -1; + + } else { + std::cout << "Er, we don't deal with " << rates.size() + << " rates at the moment..." << std::endl; + exit(0); + } + return ratemat; +} +*/ + + +// make sure sequence contains only valid nucleotide characters +void SequenceGenerator::check_valid_sequence () { + // make sure uppercase + root_sequence_ = string_to_upper(root_sequence_); + if (is_dna_) { + std::size_t found = root_sequence_.find_first_not_of(nucleotides_); + if (found != std::string::npos) { + std::cerr << "Error: illegal character '" << root_sequence_[found] + << "' at position " << found+1 + << " (only A,C,G,T allowed). Maybe specify AA with -c? Exiting." + << std::endl; + exit(0); + } + } else { + std::size_t found = root_sequence_.find_first_not_of(amino_acids_); + if (found != std::string::npos) { + std::cerr << "Error: illegal character '" << root_sequence_[found] + << "' at position " << found+1 + << " (only AA chars allowed). Exiting." << std::endl; + exit(0); + } + + } +} + + +// not sure of a more elegant way to do this... +std::vector SequenceGenerator::get_sequences () const { + return res; +} + + +// call this whenever a random float is needed +float SequenceGenerator::get_uniform_random_deviate () { + return uniformDistrib_(generator_); +} + + +// hrm alpha is not used... +float SequenceGenerator::get_gamma_random_deviate (float alpha) { + return gammaDistrib_(generator_); +} + +//SEQGEN::~SEQGEN() { +// // TODO Auto-generated destructor stub +//} diff --git a/src/seq_gen.h b/src/seq_gen.h new file mode 100644 index 0000000..1b723d7 --- /dev/null +++ b/src/seq_gen.h @@ -0,0 +1,90 @@ +#ifndef PX_SEQ_GEN_H +#define PX_SEQ_GEN_H + +#include +#include +#include +#include + +#include "sequence.h" + +class Tree; // forward declaration +class Node; // forward declaration + +class SequenceGenerator { + +private: + // constant values + Tree * tree_; + + unsigned int seqlen_; + int nreps_; + long int seed_; + int nstates_; // number of character states + + float alpha_; + float pinvar_; + + std::string root_sequence_; + + std::vector base_freqs_; + std::vector aa_freqs_; + std::vector< std::vector > rmatrix_; + std::vector multi_rates_; + std::vector site_rates_; + + bool show_ancs_; + bool print_node_labels_; + bool multi_model_; + bool is_dna_; + + // hard-coded stuff + static std::map nuc_map_; + static std::map aa_map_; + static std::string nucleotides_; + static std::string amino_acids_; + + std::mt19937 generator_; + std::uniform_real_distribution uniformDistrib_; + std::gamma_distribution gammaDistrib_; + + // set all values + void initialize(); + + // intermediate results + std::map seqs_; + std::map > > ancq_; + + // the result to return + std::vector res; + + // los funciones + void print_node_labels (); + void label_internal_nodes (); + void preorder_tree_traversal (); + //std::vector site_rates; + std::vector< std::vector > calculate_q_matrix (); + std::vector< std::vector > calcQmatrix (std::vector< std::vector >); + std::vector< std::vector > calculate_p_matrix (const std::vector< std::vector >& QMatrix, + float br); + std::string simulate_sequence (const std::string& anc, std::vector< std::vector >& Matrix, + const float& brlength); + std::string generate_random_sequence (); + //std::vector< std::vector > construct_rate_matrix (const std::vector& rates); + void check_valid_sequence (); + float get_uniform_random_deviate (); + float get_gamma_random_deviate (float); + std::vector set_site_rates (); + +public: + SequenceGenerator (const unsigned int&seqlength, const std::vector& basefreq, + std::vector< std::vector >& rmatrix, Tree * tree, const bool& showancs, + const int& nreps, const long int& seed, const float& alpha, const float& pinvar, + const std::string& ancseq, const bool& printpost, const std::vector& multirates, + const std::vector& aabasefreq, const bool& is_dna); + + // return results + std::vector get_sequences () const; +}; + +#endif /* PX_SEQ_GEN_H */ diff --git a/src/seq_info.cpp b/src/seq_info.cpp new file mode 100644 index 0000000..76806a8 --- /dev/null +++ b/src/seq_info.cpp @@ -0,0 +1,516 @@ +#include +#include +#include +#include +#include + +#include "seq_info.h" +#include "utils.h" +#include "seq_utils.h" +#include "sequence.h" +#include "seq_reader.h" + + +SeqInfo::SeqInfo (std::istream* pios, std::ostream* poos, bool& indiv, + const bool& force_protein):concatenated_(""), seq_chars_(""), + output_indiv_(indiv), datatype_set_(false), is_dna_(false), + is_protein_(false), is_multi_(false), is_binary_(false), + alpha_set_(false), alpha_name_(""), seq_type_(""), gap_('-'), + missing_('?'), num_taxa_(0), percent_missing_(0.0), + is_aligned_(false), seq_length_reader_(0), aligned_length_(0), + longest_tax_label_(0) { + // maybe get rid of this? how often is inference wrong? + if (force_protein) { + is_protein_ = true; + datatype_set_ = true; + set_alphabet(); + } + pios_ = pios; + poos_ = poos; + read_in_alignment(); +} + + +// for each character in the alphabet 'seq_chars_' +void SeqInfo::count_chars_indiv_seq (std::string& seq) { + seq = string_to_upper(seq); + total_.clear(); // probably unnecessary + for (char seq_char : seq_chars_) { + total_[seq_char] = 0.0; + } + for (char c : seq) { + // Ensure there is no weird J or whatever characters (includes '?') + if (total_.find(c) == total_.end()) { + total_[missing_]++; + } else { + total_[c]++; + } + } +} + + +// alternate to above, accumulate char counts across seqs +void SeqInfo::count_chars (std::string& seq) { + unsigned int sum = 0; + seq = string_to_upper(seq); + if (output_indiv_) { + std::vector icounts(seq_chars_.length(), 0); + for (unsigned int i = 0; i < seq_chars_.length(); i++) { + auto num = static_cast(std::count(seq.begin(), seq.end(), + seq_chars_[i])); + char_counts_[i] += num; + icounts[i] += num; + sum += num; + } + // add invalid char counts, add to missing char count + if (sum < seq.length()) { + char_counts_[char_counts_.size() - 1] += (seq.length() - sum); + icounts[icounts.size() - 1] += (seq.length() - sum); + } + indiv_char_counts_.push_back(icounts); + // this is cool, but unnecessary here + //std::transform(char_counts_.begin(), char_counts_.end(), + // icounts.begin(), char_counts_.begin(), std::plus()); + } else { + for (unsigned int i = 0; i < seq_chars_.length(); i++) { + auto num = static_cast(std::count(seq.begin(), seq.end(), + seq_chars_[i])); + char_counts_[i] += num; + sum += num; + } + // add invalid char counts, add to missing char count + if (sum < seq.length()) { + char_counts_[char_counts_.size() - 1] += (seq.length() - sum); + } + } +} + + +// moving this outside, since so many functions need it +// read everything in, process afterwards +// this means that all seqs reside in memory. oh well... +// seqs are stored, datatype and alphabet is set +void SeqInfo::read_in_alignment () { + Sequence seq; + std::string retstring; + int ft = test_seq_filetype_stream(*pios_, retstring); + int file_ntax = 0; // ntax declared in the file itself + file_type_ = get_filetype_string(ft); + + // if nexus, grab metadata + if (file_type_ == "nexus") { + //std::cout << "Trying to read in a Nexus alignment..." << std::endl; + bool is_interleaved = false; + get_nexus_alignment_properties(*pios_, file_ntax, seq_length_reader_, + is_interleaved, alpha_name_, seq_chars_, gap_, missing_); + // std::cout << "alpha_name_ = " << alpha_name_ << std::endl; + set_datatype(); + if (is_multi_ && !seq_chars_.empty()) { + seq_chars_ += gap_; + seq_chars_ += missing_; + char_counts_.resize(seq_chars_.size(), 0); + alpha_set_ = true; + } + retstring = ""; // have to set so seq_reader knows we are mid-file + if (!is_interleaved) { + while (read_next_seq_from_stream(*pios_, ft, retstring, seq)) { + seqs_.push_back(seq); + } + } else { + // need to read in everything at once + seqs_ = read_interleaved_nexus(*pios_, file_ntax, seq_length_reader_); + } + } else { + bool complicated_phylip = false; + // check if we are dealing with a complicated phylip format + if (file_type_ == "phylip") { + get_phylip_dimensions(retstring, file_ntax, seq_length_reader_); + complicated_phylip = is_complicated_phylip(*pios_, seq_length_reader_); + } + if (complicated_phylip) { + seqs_ = read_phylip(*pios_, file_ntax, seq_length_reader_); + make_concatenated_sequence(); + set_alphabet_from_sampled_seqs(concatenated_); + set_datatype(); + } else { + while (read_next_seq_from_stream(*pios_, ft, retstring, seq)) { + seqs_.push_back(seq); + } + if (ft == 2) { // fasta has an trailing one + seqs_.push_back(seq); + } + make_concatenated_sequence(); + set_alphabet_from_sampled_seqs(concatenated_); + set_datatype(); + } + } + + // now do the counting + if (is_multi_ && !alpha_set_) { + // grab all unique characters from the input string + // here, seqs from all individuals are concatenated, so represents all sampled characters + make_concatenated_sequence(); + set_alphabet_from_sampled_seqs(concatenated_); + set_datatype(); + } + if (file_ntax != 0) { + if (file_ntax != static_cast(seqs_.size())) { + std::cerr << "Error: number of taxa declared in the file (" + << ") does not match the number read (" << seqs_.size() + << "). Exiting." << std::endl; + exit(1); + } + } + num_taxa_ = static_cast(seqs_.size()); +} + + +// calculate character state frequencies +void SeqInfo::calculate_freqs () { + Sequence seq; + std::string name; + for (const auto & sq : seqs_) { + seq = sq; + temp_seq_ = seq.get_sequence(); + name = seq.get_id(); + seq_lengths_.push_back(static_cast(temp_seq_.length())); + count_chars(temp_seq_); + taxon_labels_.push_back(name); + } +} + + +// alt to print_summary_table_whole_alignment. essential difference is transposed results +void SeqInfo::return_freq_table () { + const int colWidth = 12; + if (output_indiv_) { + // need to take into account longest_tax_label_ + longest_tax_label_ = get_longest_label(taxon_labels_); + std::string pad = std::string(longest_tax_label_, ' '); + // header + (*poos_) << pad << " "; + for (char seq_char : seq_chars_) { + (*poos_) << std::right << std::setw(colWidth) << seq_char << " "; + } + // return nchar for individual seqs + (*poos_) << std::right << std::setw(colWidth) << "Nchar" << std::endl; + for (unsigned int i = 0; i < static_cast(num_taxa_); i++) { + unsigned int diff = longest_tax_label_ - static_cast(taxon_labels_[i].size()); + (*poos_) << taxon_labels_[i]; + if (diff > 0) { + pad = std::string(diff, ' '); + (*poos_) << pad; + } + (*poos_) << " "; + for (unsigned int j = 0; j < seq_chars_.length(); j++) { + (*poos_) << std::right << std::setw(colWidth) + << static_cast(indiv_char_counts_[i][j]) / static_cast(seq_lengths_[i]) << " "; + } + (*poos_) << std::right << std::setw(colWidth) << seq_lengths_[i] << std::endl; + } + } else { + // header + for (unsigned int i = 0; i < seq_chars_.length(); i++) { + (*poos_) << std::right << std::setw(colWidth) << seq_chars_[i]; + if (i != seq_chars_.length() - 1) { + (*poos_) << " "; + } + } + (*poos_) << std::endl; + // counts + for (unsigned int i = 0; i < seq_chars_.length(); i++) { + (*poos_) << std::right << std::setw(colWidth) << char_counts_[i]; + if (i != seq_chars_.length() - 1) { + (*poos_) << " "; + } + } + (*poos_) << std::endl; + // freqs + unsigned int total_num_chars = sum(char_counts_); + for (unsigned int i = 0; i < seq_chars_.length(); i++) { + (*poos_) << std::fixed << std::right << std::setw(colWidth) + << static_cast(char_counts_[i]) / static_cast(total_num_chars); + if (i != seq_chars_.length() - 1) { + (*poos_) << " "; + } + } + (*poos_) << std::endl; + } +} + + +void SeqInfo::print_summary_table_whole_alignment () { + const int colWidth = 12; + double total_num_chars = 0.0; + + //(*poos) << "General Stats For All Sequences" << std::endl; + (*poos_) << "File type: " << file_type_ << std::endl; + (*poos_) << "Number of sequences: " << num_taxa_ << std::endl; + if (std::adjacent_find(seq_lengths_.begin(), seq_lengths_.end(), + std::not_equal_to<>()) == seq_lengths_.end()) { + is_aligned_ = true; + } else { + is_aligned_ = false; + } + (*poos_) << "Is aligned: " << std::boolalpha << is_aligned_ << std::endl; + if (is_aligned_) { + aligned_length_ = seq_lengths_[0]; + (*poos_) << "Sequence length: " << aligned_length_ << std::endl; + total_num_chars = static_cast(seq_lengths_[0] * num_taxa_); + } else { + total_num_chars = static_cast(sum(seq_lengths_)); + } + + (*poos_) << "--------- " << seq_type_ << " TABLE ----------" << std::endl; + (*poos_) << std::right << std::setw(4) << seq_type_ << " " + << std::setw(colWidth) << "Total" << " " + << std::setw(colWidth) << "Proportion" << std::endl; + for (char seq_char : seq_chars_) { + (*poos_) << std::right << std::setw(4) << seq_char << " " + << std::setw(colWidth) << static_cast(total_[seq_char]) << " " + << std::setw(colWidth) << ((total_[seq_char] / total_num_chars)) << std::endl; + } + if (is_dna_) { + (*poos_) << std::right << std::setw(4) << "G+C" << " " + << std::setw(colWidth) << static_cast(total_['G'] + total_['C']) << " " + << std::setw(colWidth) << (((total_['G'] + total_['C']) / total_num_chars)) << std::endl; + } + (*poos_) << "--------- " << seq_type_ << " TABLE ----------" << std::endl; +} + + +void SeqInfo::make_concatenated_sequence () { + if (concatenated_.length() == 0) { + for (auto & seq : seqs_) { + concatenated_ += seq.get_sequence(); + } + } +} + + +// just grab labels, disregard the rest +void SeqInfo::collect_taxon_labels () { + taxon_labels_ = collect_names(seqs_); +} + + +// assumed aligned if all seqs are the same length +void SeqInfo::check_is_aligned () { + is_aligned_ = is_aligned(seqs_); +} + + +void SeqInfo::get_num_chars () { + for (auto & seq : seqs_) { + seq_lengths_.push_back(seq.get_length()); + } + // check if all seqs are the same length + if (std::adjacent_find(seq_lengths_.begin(), seq_lengths_.end(), + std::not_equal_to<>()) == seq_lengths_.end()) { + is_aligned_ = true; + aligned_length_ = seq_lengths_[0]; + } else { + is_aligned_ = false; + } +} + + +// does not currently do per-individual... +// assumes gap=- and missing=? +void SeqInfo::calc_missing () { + // missing data are the last two characters (-N for DNA, -X for protein) + unsigned int miss = 0; + + calculate_freqs(); + + if (!output_indiv_) { + // proportion for alignment as a whole + double temp = 0.0; + unsigned int total_num_chars = sum(char_counts_); + for (auto i = static_cast(seq_chars_.length()-2u); i < seq_chars_.length(); i++) { + temp += static_cast(char_counts_[i]) / static_cast(total_num_chars); + miss += char_counts_[i]; + } + percent_missing_ = temp; + //std::cout << "total_num_chars = " << total_num_chars << std::endl; + //std::cout << "total missing = " << miss << std::endl; + } else { + // per individual sequence + // should we require seqs be aligned? stats would make more sense + Sequence seq; + std::string name; + for (unsigned int i = 0; i < seqs_.size(); i++) { + seq = seqs_[i]; + temp_seq_ = seq.get_sequence(); + name = seq.get_id(); + taxon_labels_.push_back(name); + seq_lengths_.push_back(static_cast(temp_seq_.length())); + count_chars(temp_seq_); + miss = 0; + for (auto j = static_cast(seq_chars_.length()-2); j < seq_chars_.length(); j++) { + miss += indiv_char_counts_[i][j]; + } + missing_counts_.push_back(miss); + } + } +} + + +void SeqInfo::return_missing () { + if (!output_indiv_) { + (*poos_) << percent_missing_ << std::endl; + } else { + const int colWidth = 12; + // need to take into account longest_tax_label_ + longest_tax_label_ = get_longest_label(taxon_labels_); + std::string pad = std::string(longest_tax_label_, ' '); + // header + (*poos_) << pad << " "; + (*poos_) << std::right << std::setw(colWidth) << "Nchar" << " "; + (*poos_) << std::right << std::setw(colWidth) << "Missing" << " "; + (*poos_) << std::right << std::setw(colWidth) << "Proportion" << std::endl; + + // return nchar for individual seqs + for (unsigned int i = 0; i < num_taxa_; i++) { + unsigned long diff = longest_tax_label_ - taxon_labels_[i].size(); + (*poos_) << taxon_labels_[i]; + if (diff > 0) { + pad = std::string(diff, ' '); + (*poos_) << pad; + } + (*poos_) << " "; + (*poos_) << std::right << std::setw(colWidth) << seq_lengths_[i] << " "; + (*poos_) << std::right << std::setw(colWidth) << missing_counts_[i] << " "; + (*poos_) << std::right << std::setw(colWidth) + << static_cast(missing_counts_[i]) / static_cast(seq_lengths_[i]) << std::endl; + } + } + +} + + +// return whichever property set to true +void SeqInfo::get_property (const bool& get_labels, const bool& check_aligned, + const bool& get_nseq, const bool& get_freqs, const bool& get_nchar, + const bool& get_missing) { + + if (get_labels) { + collect_taxon_labels(); + for (const auto & taxon_label : taxon_labels_) { + (*poos_) << taxon_label << std::endl; + } + } else if (check_aligned) { + check_is_aligned(); + (*poos_) << std::boolalpha << is_aligned_ << std::endl; + } else if (get_nseq) { + (*poos_) << num_taxa_ << std::endl; + } else if (get_freqs) { + calculate_freqs(); + return_freq_table(); + } else if (get_missing) { + calc_missing(); + return_missing(); + } else if (get_nchar) { + get_num_chars (); + if (!output_indiv_) { // single return value + if (is_aligned_) { + (*poos_) << aligned_length_ << std::endl; + } else { + // not aligned + (*poos_) << "sequences are not aligned" << std::endl; + } + } else { // individual lengths + collect_taxon_labels(); + longest_tax_label_ = get_longest_label(taxon_labels_); + for (unsigned int i = 0; i < num_taxa_; i++) { + unsigned long diff = longest_tax_label_ - taxon_labels_[i].size(); + (*poos_) << taxon_labels_[i]; + if (diff > 0) { + std::string pad = std::string(diff, ' '); + (*poos_) << pad; + } + (*poos_) << " " << seq_lengths_[i] << std::endl; + } + } + } +} + + +void SeqInfo::set_datatype () { + if (alpha_name_ == "DNA") { + is_dna_ = true; + seq_type_ = "Nucl"; + set_alphabet(); + } else if (alpha_name_ == "AA") { + is_protein_ = true; + seq_type_ = "Prot"; + set_alphabet(); + } else if (alpha_name_ == "BINARY") { + is_binary_ = true; + seq_type_ = "Binary"; + set_alphabet(); + } else if (alpha_name_ == "MULTI") { + is_multi_ = true; + seq_type_ = "Multi"; + // alphabet is either 1) supplied (nexus) or 2) comes from entire alignment + } else { + std::cerr << "Error: cannot determine alignment type. Exiting." << std::endl; + exit(0); + } + datatype_set_ = true; +} + + +// TODO: need to add morphology ('MULTI') data +// - may be passed in (nexus) +// - otherwise, needs to be gleaned from entire alignment +void SeqInfo::set_alphabet () { + if (is_protein_) { + seq_chars_ = "ACDEFGHIKLMNPQRSTVWYX"; + } else if (is_binary_) { + seq_chars_ = "01"; + } else { + seq_chars_ = "ACGT"; // not using ambiguity codes here + } + seq_chars_ += gap_; + seq_chars_ += missing_; + char_counts_.resize(seq_chars_.size(), 0); + alpha_set_ = true; +} + + +// TODO: get rid of the concatenated_ business +void SeqInfo::summarize () { + // a concatenated seq (i.e., across all indiv) will be used for all stats + calculate_freqs(); + + if (output_indiv_) { + return_freq_table(); + } else { + // pass the seq concatenated across all individuals + // probably can skip a bunch of the stuff above... + make_concatenated_sequence(); + count_chars_indiv_seq(concatenated_); + print_summary_table_whole_alignment(); + } +} + + +// this... doesn't set the alphabet?!? +void SeqInfo::set_alphabet_from_sampled_seqs (const std::string& seq) { + seq_chars_ = get_alphabet_from_sequence(seq); + // expecting order: valid, gap, missing + // remove gap and missing (if present) + seq_chars_.erase(std::remove(seq_chars_.begin(), seq_chars_.end(), gap_), seq_chars_.end()); + seq_chars_.erase(std::remove(seq_chars_.begin(), seq_chars_.end(), missing_), seq_chars_.end()); + + // and append them back on + seq_chars_ += gap_; + seq_chars_ += missing_; + char_counts_.resize(seq_chars_.size(), 0); + Sequence sq; + sq.set_id("cat"); + sq.set_sequence(seq); + alpha_name_ = sq.get_alpha_name(); + alpha_set_ = true; +} diff --git a/src/seq_info.h b/src/seq_info.h new file mode 100644 index 0000000..568cabd --- /dev/null +++ b/src/seq_info.h @@ -0,0 +1,72 @@ +#ifndef PX_LS_SEQ_H +#define PX_LS_SEQ_H + +#include +#include +#include +#include + +#include "sequence.h" + +class SeqInfo { +private: + std::string concatenated_; + std::string temp_seq_; + std::string seq_chars_; // the alphabet + std::string file_type_; //"nexus", "phylip", "fasta", "fastq" + bool output_indiv_; // report stats for each seq + + bool datatype_set_; + bool is_dna_; + bool is_protein_; + bool is_multi_; + bool is_binary_; + bool alpha_set_; + + std::string alpha_name_; // phyx seq ids: DNA, AA, BINARY, MULTI + std::string seq_type_; // label used for output table: Prot, Nucl, Mult, Binary + char gap_; + char missing_; + std::map total_; + unsigned int num_taxa_; + double percent_missing_; + + // new stuff + std::vector seqs_; + std::vector taxon_labels_; + std::vector seq_lengths_; + std::vector char_counts_; // length seq_chars_ (i.e. the alphabet). accumulated across all seqs + std::vector missing_counts_; // for individual seqs + std::vector< std::vector > indiv_char_counts_; + bool is_aligned_; + int seq_length_reader_; // signed variable used by alignment readers + unsigned int aligned_length_; // actual stored value for class + std::istream* pios_; + std::ostream* poos_; + unsigned int longest_tax_label_; + + void read_in_alignment (); + void collect_taxon_labels (); + void check_is_aligned (); + void make_concatenated_sequence (); + void get_num_chars (); + void set_alphabet (); + void count_chars_indiv_seq (std::string& seq); + void count_chars (std::string& seq); + void print_summary_table_whole_alignment (); + void return_freq_table (); + void calculate_freqs (); + void calc_missing (); + void set_datatype (); + void set_alphabet_from_sampled_seqs (const std::string& seq); + void return_missing (); + +public: + SeqInfo (std::istream* pios, std::ostream* poos, bool& indiv, const bool& force_protein); + void summarize (); + void get_property (const bool& get_labels, const bool& check_aligned, + const bool& get_nseq, const bool& get_freqs, const bool& get_nchar, + const bool& get_missing); +}; + +#endif /* PX_LS_SEQ_H */ diff --git a/src/seq_models.cpp b/src/seq_models.cpp new file mode 100644 index 0000000..981f53d --- /dev/null +++ b/src/seq_models.cpp @@ -0,0 +1,145 @@ +#include +#include +#include +#include +#include +#include + +#include "seq_models.h" +#include "sequence.h" +#include "utils.h" + + +void read_scoring_matrix (char * filename, + std::map >& sc_mat) { + std::ifstream fstr(filename); + sc_mat.clear(); + std::vector order; + bool first = true; + std::string line; + while (getline_safe(fstr, line)) { + if (line[0] == '#' || line.empty()) { + continue; + } + std::vector tokens; + std::string del(" \t"); + tokenize(line, tokens, del); + for (auto & tk : tokens) { + trim_spaces(tk); // this will never be used, as it was split on whitespace + } + if (first) { + first = false; + for (auto & tk : tokens) { + order.push_back(tk[0]); + } + for (char j : order) { + sc_mat[j] = std::map(); + } + continue; + } + for (unsigned int j = 0; j < order.size(); j++) { + sc_mat[tokens[0][0]][order[j]] = std::atoi(tokens[j+1].c_str()); //#changed from int to float + } + } + fstr.close(); +} + + +void read_scoring_matrix_from_lines(std::vector& lines, + std::map >& sc_mat) { + sc_mat.clear(); + std::vector order; + bool first = true; + for (auto line : lines) { + if (line[0] == '#') { + continue; + } + std::vector tokens; + std::string del(" \t"); + tokenize(line, tokens, del); + for (auto & tk : tokens) { + trim_spaces(tk); // this will never be used, as it was split on whitespace + } + if (first) { + first = false; + for (auto & tk : tokens) { + order.push_back(tk[0]); + } + for (char j : order) { + sc_mat[j] = std::map(); + } + continue; + } + for (unsigned int j = 0; j < order.size(); j++) { + sc_mat[tokens[0][0]][order[j]] = std::atoi(tokens[j+1].c_str()); //#changed from int to float + } + } +} + + +void get_ednafull(std::map >& sc_mat) { + std::vector sts; + sts.emplace_back("#"); + sts.emplace_back("# This matrix was created by Todd Lowe 12/10/92"); + sts.emplace_back("#"); + sts.emplace_back("# Uses ambiguous nucleotide codes, probabilities rounded to"); + sts.emplace_back("# nearest integer"); + sts.emplace_back("#"); + sts.emplace_back("# Lowest score = -4, Highest score = 5"); + sts.emplace_back("#"); + sts.emplace_back(" A T G C S W R Y K M B V H D N U"); + sts.emplace_back("A 5 -4 -4 -4 -4 1 1 -4 -4 1 -4 -1 -1 -1 -2 -4"); + sts.emplace_back("T -4 5 -4 -4 -4 1 -4 1 1 -4 -1 -4 -1 -1 -2 5"); + sts.emplace_back("G -4 -4 5 -4 1 -4 1 -4 1 -4 -1 -1 -4 -1 -2 -4"); + sts.emplace_back("C -4 -4 -4 5 1 -4 -4 1 -4 1 -1 -1 -1 -4 -2 -4"); + sts.emplace_back("S -4 -4 1 1 -1 -4 -2 -2 -2 -2 -1 -1 -3 -3 -1 -4"); + sts.emplace_back("W 1 1 -4 -4 -4 -1 -2 -2 -2 -2 -3 -3 -1 -1 -1 1"); + sts.emplace_back("R 1 -4 1 -4 -2 -2 -1 -4 -2 -2 -3 -1 -3 -1 -1 -4"); + sts.emplace_back("Y -4 1 -4 1 -2 -2 -4 -1 -2 -2 -1 -3 -1 -3 -1 1"); + sts.emplace_back("K -4 1 1 -4 -2 -2 -2 -2 -1 -4 -1 -3 -3 -1 -1 1"); + sts.emplace_back("M 1 -4 -4 1 -2 -2 -2 -2 -4 -1 -3 -1 -1 -3 -1 -4"); + sts.emplace_back("B -4 -1 -1 -1 -1 -3 -3 -1 -1 -3 -1 -2 -2 -2 -1 -1"); + sts.emplace_back("V -1 -4 -1 -1 -1 -3 -1 -3 -3 -1 -2 -1 -2 -2 -1 -4"); + sts.emplace_back("H -1 -1 -4 -1 -3 -1 -3 -1 -3 -1 -2 -2 -1 -2 -1 -1"); + sts.emplace_back("D -1 -1 -1 -4 -3 -1 -1 -3 -1 -3 -2 -2 -2 -1 -1 -1"); + sts.emplace_back("N -2 -2 -2 -2 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -2"); + sts.emplace_back("U -4 5 -4 -4 -4 1 -4 1 1 -4 -1 -4 -1 -1 -2 5"); + read_scoring_matrix_from_lines(sts, sc_mat); +} + + +void get_blosum62(std::map >& sc_mat) { + std::vector sts; + sts.emplace_back("# Matrix made by matblas from blosum62.iij"); + sts.emplace_back("# * column uses minimum score"); + sts.emplace_back("# BLOSUM Clustered Scoring Matrix in 1/2 Bit Units"); + sts.emplace_back("# Blocks Database = /data/blocks_5.0/blocks.dat"); + sts.emplace_back("# Cluster Percentage: >= 62"); + sts.emplace_back("# Entropy = 0.6979, Expected = -0.5209"); + sts.emplace_back(" A R N D C Q E G H I L K M F P S T W Y V B Z X *"); + sts.emplace_back("A 4 -1 -2 -2 0 -1 -1 0 -2 -1 -1 -1 -1 -2 -1 1 0 -3 -2 0 -2 -1 0 -4 "); + sts.emplace_back("R -1 5 0 -2 -3 1 0 -2 0 -3 -2 2 -1 -3 -2 -1 -1 -3 -2 -3 -1 0 -1 -4 "); + sts.emplace_back("N -2 0 6 1 -3 0 0 0 1 -3 -3 0 -2 -3 -2 1 0 -4 -2 -3 3 0 -1 -4 "); + sts.emplace_back("D -2 -2 1 6 -3 0 2 -1 -1 -3 -4 -1 -3 -3 -1 0 -1 -4 -3 -3 4 1 -1 -4 "); + sts.emplace_back("C 0 -3 -3 -3 9 -3 -4 -3 -3 -1 -1 -3 -1 -2 -3 -1 -1 -2 -2 -1 -3 -3 -2 -4 "); + sts.emplace_back("Q -1 1 0 0 -3 5 2 -2 0 -3 -2 1 0 -3 -1 0 -1 -2 -1 -2 0 3 -1 -4 "); + sts.emplace_back("E -1 0 0 2 -4 2 5 -2 0 -3 -3 1 -2 -3 -1 0 -1 -3 -2 -2 1 4 -1 -4 "); + sts.emplace_back("G 0 -2 0 -1 -3 -2 -2 6 -2 -4 -4 -2 -3 -3 -2 0 -2 -2 -3 -3 -1 -2 -1 -4 "); + sts.emplace_back("H -2 0 1 -1 -3 0 0 -2 8 -3 -3 -1 -2 -1 -2 -1 -2 -2 2 -3 0 0 -1 -4 "); + sts.emplace_back("I -1 -3 -3 -3 -1 -3 -3 -4 -3 4 2 -3 1 0 -3 -2 -1 -3 -1 3 -3 -3 -1 -4 "); + sts.emplace_back("L -1 -2 -3 -4 -1 -2 -3 -4 -3 2 4 -2 2 0 -3 -2 -1 -2 -1 1 -4 -3 -1 -4 "); + sts.emplace_back("K -1 2 0 -1 -3 1 1 -2 -1 -3 -2 5 -1 -3 -1 0 -1 -3 -2 -2 0 1 -1 -4 "); + sts.emplace_back("M -1 -1 -2 -3 -1 0 -2 -3 -2 1 2 -1 5 0 -2 -1 -1 -1 -1 1 -3 -1 -1 -4 "); + sts.emplace_back("F -2 -3 -3 -3 -2 -3 -3 -3 -1 0 0 -3 0 6 -4 -2 -2 1 3 -1 -3 -3 -1 -4 "); + sts.emplace_back("P -1 -2 -2 -1 -3 -1 -1 -2 -2 -3 -3 -1 -2 -4 7 -1 -1 -4 -3 -2 -2 -1 -2 -4 "); + sts.emplace_back("S 1 -1 1 0 -1 0 0 0 -1 -2 -2 0 -1 -2 -1 4 1 -3 -2 -2 0 0 0 -4 "); + sts.emplace_back("T 0 -1 0 -1 -1 -1 -1 -2 -2 -1 -1 -1 -1 -2 -1 1 5 -2 -2 0 -1 -1 0 -4 "); + sts.emplace_back("W -3 -3 -4 -4 -2 -2 -3 -2 -2 -3 -2 -3 -1 1 -4 -3 -2 11 2 -3 -4 -3 -2 -4 "); + sts.emplace_back("Y -2 -2 -2 -3 -2 -1 -2 -3 2 -1 -1 -2 -1 3 -3 -2 -2 2 7 -1 -3 -2 -1 -4 "); + sts.emplace_back("V 0 -3 -3 -3 -1 -2 -2 -3 -3 3 1 -2 1 -1 -2 -2 0 -3 -1 4 -3 -2 -1 -4 "); + sts.emplace_back("B -2 -1 3 4 -3 0 1 -1 0 -3 -4 0 -3 -3 -2 0 -1 -4 -3 -3 4 1 -1 -4 "); + sts.emplace_back("Z -1 0 0 1 -3 3 4 -2 0 -3 -3 1 -1 -3 -1 0 -1 -3 -2 -2 1 4 -1 -4 "); + sts.emplace_back("X 0 -1 -1 -1 -2 -1 -1 -1 -1 -1 -1 -1 -1 -1 -2 0 0 -2 -1 -1 -1 -1 -1 -4 "); + sts.emplace_back("* -4 -4 -4 -4 -4 -4 -4 -4 -4 -4 -4 -4 -4 -4 -4 -4 -4 -4 -4 -4 -4 -4 -4 1 "); + read_scoring_matrix_from_lines(sts, sc_mat); +} diff --git a/src/seq_models.h b/src/seq_models.h new file mode 100644 index 0000000..378ee08 --- /dev/null +++ b/src/seq_models.h @@ -0,0 +1,17 @@ +#ifndef PX_SEQ_MODELS_H +#define PX_SEQ_MODELS_H + +#include +#include +#include + +#include "sequence.h" + + +void read_scoring_matrix (char * filename, std::map >& sc_mat); +void read_scoring_matrix_from_lines (std::vector& lines, + std::map >& sc_mat); +void get_ednafull (std::map >& sc_mat); +void get_blosum62 (std::map >& sc_mat); + +#endif /* PX_SEQ_MODELS_H */ diff --git a/src/seq_reader.cpp b/src/seq_reader.cpp new file mode 100644 index 0000000..175dd7b --- /dev/null +++ b/src/seq_reader.cpp @@ -0,0 +1,1209 @@ +#include +#include +#include +#include +#include +#include +#include +#include +#include +#include + +#include "sequence.h" +#include "seq_reader.h" +#include "seq_utils.h" +#include "utils.h" + + +// for printing purposes (and to remind programmers what ints refer to) +static std::map filetype_map = { + {0, "nexus"}, + {1, "phylip"}, + {2, "fasta"}, + {3, "fastq"} +}; + + +std::string get_filetype_string (const int& ft) { + std::string ftype = filetype_map[ft]; + return ftype; +} + +/* + * tests the filetype by checking the first string and guessing based on + * # (nexus), num (phylip), > (fasta), @ (fastq) + * returns in the order above, 0, 1, 2, 3, 666 -- no filetype recognized +*/ +int test_seq_filetype_stream(std::istream& stri, std::string& retstring) { + if (!getline_safe(stri, retstring)) { + std::cout << "ERROR: end of file too soon" << std::endl; + } + int ret = 666; // if you get 666, there is no filetype set + if (retstring[0] == '#') { + ret = 0; + } else if (retstring[0] == '>') { + ret = 2; + } else if (retstring[0] == '@') { + ret = 3; + } else { + std::vector tokens; + std::string del(" \t"); + tokenize(retstring, tokens, del); + if (tokens.size() > 1) { + trim_spaces(tokens[0]); + if (is_number(tokens[0])) { + ret = 1; + } + } + } + return ret; +} + + +/* + * returns the next string in the getline if there is one + * TODO: nexus interleaved is not going to work here (read_interleaved_nexus does this) + * TODO: - skip Nexus comment lines - done + * - check if label is quoted. if so, need to skip any whitespace that might be present +*/ +bool read_next_seq_from_stream (std::istream & stri, int ftype, + std::string& retstring, Sequence& seq) { + std::string tline; + if (ftype == 0) { // nexus + // are we at the beginning of the file? + // TODO: add check for interleave and kick out to do a different reader + // checks for beginning of char by MATRIX + if (!retstring.empty() && retstring[0] == '#') { + bool found = false; + while (getline_safe(stri, tline)) { + trim_spaces(tline); + tline = string_to_upper(tline); + if (tline == "MATRIX") { + found = true; + break; + } + } + if (!found) { + std::cout << "badly formatted nexus file, missing 'MATRIX' in data/character block" + << std::endl; + } + retstring = ""; + } + getline_safe(stri, tline); + trim_spaces(tline); + while (tline.empty() || check_comment_line(tline)) { + if (getline_safe(stri, tline)) { + trim_spaces(tline); + } else { + return false; + } + } + std::vector tokens; + std::string del(" \t"); + tokenize(tline, tokens, del); + + // need to check for quoted labels here + + if (tokens.size() > 1) { + for (auto & tk : tokens) { + trim_spaces(tk); + } + if (tokens[0] == ";") { + return false; + } + if (tokens[0][0] == '\'') { // treat ' and " cases separately + std::string::size_type start = tline.find_first_of('\''); + std::string::size_type stop = tline.find_last_of('\''); + std::string label = tline.substr(start, stop - start + 1); + std::string seqstr = tline.erase(start, stop - start + 1); + trim_spaces(seqstr); + + seq.set_id(label); + seq.set_sequence(seqstr); + return true; + } + if (tokens[0][0] == '\"') { + std::string::size_type start = tline.find_first_of('\"'); + std::string::size_type stop = tline.find_last_of('\"'); + std::string label = tline.substr(start, stop - start + 1); + std::string seqstr = tline.erase(start, stop - start + 1); + trim_spaces(seqstr); + + seq.set_id(label); + seq.set_sequence(seqstr); + return true; + } + seq.set_id(tokens[0]); + seq.set_sequence(tokens[1]); + return true; + } + return false; + } else if (ftype == 1) { // phylip + std::vector tokens; + std::string del(" \t"); + // check to see if we are at the beginning of the file + if (!retstring.empty()) { + tokenize(retstring, tokens, del); + if (tokens.size() > 1) { + trim_spaces(tokens[0]); + if (is_number(tokens[0])) { + getline_safe(stri, tline); + } else { + tline = retstring; + } + } + retstring = ""; + } + if (tline.empty()) { + if (!getline_safe(stri, tline)) { + return false; + } + if (tline.empty()) { + return false; + } + } + tokens.clear(); + tokenize(tline, tokens, del); + for (auto & tk : tokens) { + trim_spaces(tk); + } + if (tokens[0].empty()) { + return false; + } + seq.set_id(tokens[0]); + //TESTING for if there are spaces in the sequences + // as would be the case for many pxstrec + if (tokens.size() == 2) { + seq.set_sequence(tokens[1]); + } else { + std::string tse = tokens[1]; + //TODO: look for decimal and add cont char if decimal present + //seq.add_multistate_char(std::atoi(tokens[1].c_str())); + for (unsigned int j=2; j < tokens.size(); j++) { + tse += " " + tokens[j]; + //seq.add_multistate_char(std::atoi(tokens[j].c_str())); + } + seq.set_sequence(tse); + } + return true; + } else if (ftype == 2) { // fasta + bool first = true; + std::string curseq; + while (true) { + if (first && !retstring.empty()) { + tline = retstring; + retstring = ""; + } else { + if (!getline_safe(stri, tline)) { + trim_spaces(curseq); + seq.set_sequence(curseq); + return false; + } + } + if (tline.substr(0, 1) == ">") { + if (first) { + std::string id_ = tline.substr(1, tline.size()-1); + first = false; + seq.set_id(id_); + curseq = ""; + } else { + trim_spaces(curseq); + seq.set_sequence(curseq); + retstring = tline; + return true; + } + } else { + curseq.append(tline); + } + } + } else if (ftype == 3) { // fastq assumes a 33 offset for now + std::string line1, line2, line3, line4; + if (!retstring.empty()) { + line1 = retstring; + retstring = ""; + } else if (!getline_safe(stri, line1)) { + return false; + } + if (!getline_safe(stri, line2)) { + return false; + } + if (!getline_safe(stri, line3)) { + return false; + } + if (!getline_safe(stri, line4)) { + return false; + } + seq.set_id(line1.substr(1, line1.size()-1)); + seq.set_sequence(line2); + seq.set_qualstr(line4, 33); + return true; + } + return false; +} + + +// don't search for MATRIX; if we know it is interleaved, MATRIX has already been read +// need to check for internal comments +// TODO: need to be able to handle quoted strings (specifically, labels that contain spaces) +// - see function above to see how to do this +std::vector read_interleaved_nexus (std::istream& stri, int num_taxa, + int num_char) { + std::vector seqs; + std::string tline; + int totcount = 0; + size_t loopcount = 0; + std::string del(" \t"); + while (getline_safe(stri, tline)) { + trim_spaces(tline); + if (!tline.empty()) { + if (check_nexus_comment(tline)) { + process_nexus_comment(stri, tline); + continue; + } + std::vector tokens; + tokenize(tline, tokens, del); + if (tokens.size() > 1) { + Sequence seq; + for (auto & tk : tokens) { + trim_spaces(tk); + } + if (tokens[0] == ";") { + std::cout << "Huh?" << std::endl; + exit(0); + } else if (tokens[0][0] == '\'') { // treat ' and " cases separately + std::string::size_type start = tline.find_first_of('\''); + std::string::size_type stop = tline.find_last_of('\''); + std::string label = tline.substr(start, stop - start + 1); + std::string seqstr = tline.erase(start, stop - start + 1); + trim_spaces(seqstr); + + seq.set_id(label); + seq.set_sequence(seqstr); + + if (totcount < num_taxa) { + seqs.push_back(seq); + } else { + // finished with first block. match and concatenate with existing seq + // as first pass, assume same ordering (demonic if it isn't) + seqs[loopcount].set_sequence(seqs[loopcount].get_sequence() + seq.get_sequence()); + } + } else if (tokens[0][0] == '\"') { + std::string::size_type start = tline.find_first_of('\"'); + std::string::size_type stop = tline.find_last_of('\"'); + std::string label = tline.substr(start, stop - start + 1); + std::string seqstr = tline.erase(start, stop - start + 1); + trim_spaces(seqstr); + + seq.set_id(label); + seq.set_sequence(seqstr); + + if (totcount < num_taxa) { + seqs.push_back(seq); + } else { + // finished with first block. match and concatenate with existing seq + // as first pass, assume same ordering (demonic if it isn't) + seqs[loopcount].set_sequence(seqs[loopcount].get_sequence() + seq.get_sequence()); + } + + } else { + seq.set_id(tokens[0]); + seq.set_sequence(tokens[1]); + if (totcount < num_taxa) { + seqs.push_back(seq); + } else { + // finished with first block. match and concatenate with existing seq + // as first pass, assume same ordering (demonic if it isn't) + seqs[loopcount].set_sequence(seqs[loopcount].get_sequence() + seq.get_sequence()); + } + } + } + totcount++; + loopcount++; + if (loopcount == static_cast(num_taxa)) { + loopcount = 0; // reset + // check if we're done + std::string terp = seqs[static_cast(num_taxa) - 1].get_sequence(); + if (static_cast(terp.size()) == num_char) { + break; + } + } + } + } + return seqs; +} + +/* + * tests the filetype by checking the first string and guessing based on + * # (nexus), num (phylip), > (fasta) + * TODO: need to add csv + * returns in the order above, 0, 1, 2, 3, 666 -- no filetype recognized +*/ +// *** this is only used by pxconrates *** +int test_char_filetype_stream(std::istream& stri, std::string& retstring) { + if (!getline_safe(stri, retstring)) { + std::cout << "ERROR: end of file too soon" << std::endl; + } + int ret = 666; // if you get 666, there is no filetype set + //NEXUS + if (retstring[0] == '#') { + ret = 0; + } else if (retstring[0] == '>') { + ret = 2; + } else { + std::vector tokens; + std::string del(" \t"); + tokenize(retstring, tokens, del); + if (tokens.size() > 1) { + trim_spaces(tokens[0]); + if (is_number(tokens[0])) { + ret = 1; + } + } + } + return ret; +} + + +/* + * returns the next string in the getline if there is one + * TODO: nexus + * TODO: decide if this should just be merged with the above reader +*/ +// *** this is only used by pxconrates *** +bool read_next_seq_char_from_stream (std::istream& stri, int ftype, + std::string& retstring, Sequence& seq) { + std::string tline; + if (ftype == 1) { // phylip + std::vector tokens; + tokens.clear(); + std::string del(" \t"); + // check to see if we are at the beginning of the file + if (!retstring.empty()) { + tokenize(retstring, tokens, del); + if (tokens.size() > 1) { + trim_spaces(tokens[0]); + if (is_number(tokens[0])) { + getline_safe(stri, tline); + } else { + tline = retstring; + } + } + retstring = ""; + } + if (tline.empty()) { + if (!getline_safe(stri, tline)) { + return false; + } + } + tokens.clear(); + tokenize(tline, tokens, del); + for (auto & tk : tokens) { + trim_spaces(tk); + } + if (tokens[0].empty()) { + return false; + } + seq.set_id(tokens[0]); + // split the tokens by spaces + for (unsigned int i = 1; i < tokens.size(); i++) { + seq.add_cont_char(std::atof(tokens[i].c_str())); + } + return true; + } + if (ftype == 2) { // fasta + bool first = true; + std::vector tokens; + std::string del(" \t"); + std::string curseq; + while (true) { + if (first && !retstring.empty()) { + tline = retstring; + retstring = ""; + } else { + if (!getline_safe(stri, tline)) { + tokens.clear(); + tokenize(curseq, tokens, del); + for (auto & tk : tokens) { + trim_spaces(tk); + } + if (tokens[0].empty()) { + return false; + } + for (auto & tk : tokens) { + seq.add_cont_char(std::atof(tk.c_str())); + } + return false; + } + } + if (tline.substr(0, 1) == ">") { + if (first) { + std::string id_ = tline.substr(1, tline.size()-1); + first = false; + seq.set_id(id_); + curseq = ""; + } else { + // split the tokens by spaces + tokens.clear(); + tokenize(curseq, tokens, del); + for (auto & tk : tokens) { + trim_spaces(tk); + } + if (tokens[0].empty()) { + return false; + } + for (auto & token : tokens) { + seq.add_cont_char(std::atof(token.c_str())); + } + retstring = tline; + return true; + } + } else { + curseq.append(tline); + } + } + } + return false; +} + + +// overloaded stream version +void get_nexus_dimensions (std::istream& stri, int& num_taxa, int& num_char, + bool& interleave) { + num_taxa = num_char = 0; + std::string tline; + while (getline_safe(stri, tline)) { + if (!tline.empty()) { + // check for comments. could be anywhere + if (check_nexus_comment(tline)) { + process_nexus_comment(stri, tline); + continue; + } + // convert to uppercase + tline = string_to_upper(tline); + std::vector searchtokens = tokenize(tline); + if (searchtokens.empty()) { + // this will be the case if only whitespace (essentially an empty line) + continue; + } + + // if we have separate TAXA and CHARACTER blocks, intervening ';' and 'END;' are ignored + // important thing is to stop when we hit 'MATRIX' + + if (searchtokens[0] == "DIMENSIONS") { + // get rid of '=' and ';'. tokens then easy to deal with. + std::replace(tline.begin(), tline.end(), '=', ' '); + std::replace(tline.begin(), tline.end(), ';', ' '); + searchtokens = tokenize(tline); + for (unsigned int i = 0; i < searchtokens.size(); i++) { + if (searchtokens[i].substr(0, 4) == "NTAX") { + i++; + num_taxa = stoi(searchtokens[i]); + } else if (searchtokens[i].substr(0, 4) == "NCHA") { + i++; + num_char = stoi(searchtokens[i]); + } + } + } else if (searchtokens[0] == "FORMAT") { + std::replace(tline.begin(), tline.end(), '=', ' '); + std::replace(tline.begin(), tline.end(), ';', ' '); + searchtokens = tokenize(tline); + for (unsigned int i = 0; i < searchtokens.size(); i++) { + if (searchtokens[i].substr(0, 4) == "INTE") { + if (i < (searchtokens.size() - 1)) { + i++; + if (searchtokens[i] == "YES") { + interleave = true; + } else if (searchtokens[i] == "NO") { + interleave = false; + } else { + // if yes or no not provided, it is true + interleave = true; + i--; // backup, since this is a different token + } + } else { + // if `interleave` is the last token, it is true + interleave = true; + } + } + } + } else if (searchtokens[0] == "MATRIX") { + break; + } + } + } +} + + +// same as above, but grabs datatype and (possibly) 'symbols' (for morphology) +// should remove global to_upper as morphology can be coded arbitrarily +// - this is _low_ priority +// need to deal with files that have a separate taxa block: +// BEGIN TAXA; +// DIMENSIONS NTAX=1215; +// TAXLABELS +// ... +// ; +// END; +// BEGIN CHARACTERS; +// DIMENSIONS NCHAR=11395; +// FORMAT MISSING=? GAP=- DATATYPE=DNA INTERLEAVE=NO; +// MATRIX + +void get_nexus_alignment_properties (std::istream& stri, int& num_taxa, + int& num_char, bool& interleave, std::string& alpha_name, + std::string& symbols, char& gap, char& missing) { + num_taxa = num_char = 0; + alpha_name = symbols = ""; + // set defaults, in case not explicitly stated + gap = '-'; + missing = '?'; + + std::string tline; + while (getline_safe(stri, tline)) { + if (!tline.empty()) { + // check for comments. could be anywhere + if (check_nexus_comment(tline)) { + process_nexus_comment(stri, tline); + continue; + } + // convert to uppercase + tline = string_to_upper(tline); + std::vector searchtokens = tokenize(tline); + if (searchtokens.empty()) { + // this will be the case if only whitespace (essentially an empty line) + continue; + } + + // if we have separate TAXA and CHARACTER blocks, intervening ';' and 'END;' are ignored + // important thing is to stop when we hit 'MATRIX' + + if (searchtokens[0] == "DIMENSIONS") { + // get rid of '=' and ';'. tokens then easy to deal with. + std::replace(tline.begin(), tline.end(), '=', ' '); + std::replace(tline.begin(), tline.end(), ';', ' '); + searchtokens = tokenize(tline); + for (unsigned int i = 0; i < searchtokens.size(); i++) { + if (searchtokens[i].substr(0, 4) == "NTAX") { + i++; + num_taxa = stoi(searchtokens[i]); + } else if (searchtokens[i].substr(0, 4) == "NCHA") { + i++; + num_char = stoi(searchtokens[i]); + } + } + } else if (searchtokens[0] == "FORMAT") { + std::replace(tline.begin(), tline.end(), '=', ' '); + std::replace(tline.begin(), tline.end(), ';', ' '); + searchtokens = tokenize(tline); + for (unsigned int i = 0; i < searchtokens.size(); i++) { + if (searchtokens[i].substr(0, 4) == "INTE") { + if (i < (searchtokens.size() - 1)) { + i++; + if (searchtokens[i] == "YES") { + interleave = true; + } else if (searchtokens[i] == "NO") { + interleave = false; + } else { + // if yes or no not provided, it is true + interleave = true; + i--; // backup, since this is a different token + } + } else { + // if `interleave` is the last token, it is true + interleave = true; + } + } else if (searchtokens[i] == "DATATYPE") { + i++; + // valid Nexus types: STANDARD, DNA, RNA, Nucleotide, Protein, Continuous + // phyx types: DNA = 0, AA = 1, BINARY = 2, MULTI = 3, CODON = 4, NA = 5 + // only considering major ones atm + if (searchtokens[i] == "STANDARD") { + alpha_name = "MULTI"; + } else if (searchtokens[i] == "DNA") { + alpha_name = "DNA"; + } else if (searchtokens[i] == "PROTEIN") { + alpha_name = "AA"; + } else { + std::cout << "Datatype '" << searchtokens[i] << "' not supported" << std::endl; + } + } else if (searchtokens[i] == "GAP") { + i++; + gap = searchtokens[i][0]; + } else if (searchtokens[i] == "MISSING") { + i++; + missing = searchtokens[i][0]; + } else if (searchtokens[i] == "SYMBOLS") { + // morphology data + // can take form SYMBOLS="012" or (annoyingly) SYMBOLS="0 1 2" + // just need to make sure both " are captured, and we should be cool + bool done = false; + bool first = true; + std::string terp; + while (!done) { + i++; + if (first) { + // check that we are in the right spot + terp = searchtokens[i]; + if (terp.front() == '"') { + // check if symbols contain no gaps + if (terp.back() == '"') { + //std::cout << "symbols are (rationally) contiguous!" << std::endl; + terp.erase (std::remove (terp.begin(), terp.end(), '"'), terp.end()); + symbols = terp; + done = true; + } + } + first = false; + } else { + terp += searchtokens[i]; + if (searchtokens[i].back() == '"') { + //std::cout << "found the end of symbols!" << std::endl; + terp.erase (std::remove (terp.begin(), terp.end(), '"'), terp.end()); + symbols = terp; + done = true; + } + } + } + //std::cout << "Captured symbols: " << symbols << std::endl; + } + } + } else if (searchtokens[0] == "MATRIX") { + if (alpha_name == "MULTI" && symbols.empty()) { + symbols = "01"; // this is default Nexus alphabet for 'standard' data + alpha_name = "BINARY"; + } + break; + } + } + } +} + + +void get_phylip_dimensions (const std::string& head, int& num_taxa, + int& num_char) { + std::vector header = tokenize(head); + num_taxa = stoi(header[0]); + num_char = stoi(header[1]); +} + + +bool is_complicated_phylip (std::istream& pios, const int& num_char) { + bool complicated = false; + std::string peek = peek_line(pios); + std::vector tokens = tokenize(peek); + + if (tokens.size() != 2) { + // if only 1, no space between label and sequence + // if > 2, internal spaces in the sequence itself + complicated = true; + } else { + // if it seems good, check that length of seq equals stated value + // if not, we are dealing with 1) interleaved or 2) multi-line + if (static_cast(tokens[1].size()) != num_char) { + complicated = true; + } + } + return complicated; +} + + +/* figure out non-simple phylip alignments formats (i.e. not contiguous): +1) multiline data (like exported from paup). e.g.: + 5 20 + TaxonA AAATTTCCCTGTCCC + TTTAA + TaxonB GCTCGAGGGGCCCCA + AGACC + TaxonC ACGCTCCCCCTTAAA + AATGA + TaxonD TCCTTGTTCAACTCC + GGTGG + TaxonE TTACTATTCCCCCCC + GCCGG +2) interleaved data. e.g.: + 5 20 + TaxonA AAATTTCCCTGTCCC + TaxonB GCTCGAGGGGCCCCA + TaxonC ACGCTCCCCCTTAAA + TaxonD TCCTTGTTCAACTCC + TaxonE TTACTATTCCCCCCC + <- blank line may or may not be present + TTTAA + AGACC + AATGA + GGTGG + GCCGG +3) sequence includes spaces. e.g.: + 5 20 + TaxonA AAATT TCCCT GTCCC TTTAA + TaxonB GCTCG AGGGG CCCCA AGACC + TaxonC ACGCT CCCCC TTAAA AATGA + TaxonD TCCTT GTTCA ACTCC GGTGG + TaxonE TTACT ATTCC CCCCC GCCGG +- header has already been processed (num_taxa, num_char) +- all bools have been initialized to false above +- for spaces-only, we will know the format after reading the first line. +- atm we are _not_ considering 10 character limit labels + - i.e., such tht there may not be a space between the label and sequence + - this includes not allowing internal spaces in taxon labels +- also assuming that there is not a combination of multiline _and_ interleaved +*/ +void get_phylip_format (std::istream& pios, const unsigned int& num_char, + bool& interleaved, bool& spaces, bool& multiline) { + // store current position of the stream so we can rewind after determining format + std::streampos spt = pios.tellg(); + + std::string line; + //std::string name; + std::string seq; + int num_elem = 0; // count chunks when spaces present + std::vector tokens; + + // debug stuff + //bool done = false; + //int lcnt = 0; // line counter for multiline seqs + + // first line + getline_safe(pios, line); + tokens = tokenize(line); + //name = tokens[0]; + num_elem = static_cast(tokens.size()); + if (num_elem == 2) { + // could be: 1) simple, 2) multiline, or interleaved + seq = tokens[1]; + if (seq.length() == num_char) { + // return to the original position in the stream + pios.seekg(spt, std::ios_base::beg); + return; // simple single line // + } + // read in next line + getline_safe(pios, line); + tokens = tokenize(line); + if (tokens.size() == 1) { + // simple multiline format + multiline = true; + // keep reading to check + /* + done = false; + while (!done) { + seq += tokens[0]; + if (seq.length() == num_char) { + done = true; + } else { + getline_safe(pios, line); + tokens = tokenize(line); + } + } + std::cout << "Successfully read in multiline sequence ;)" << std::endl; + std::cout << seq << std::endl; + */ + // return to the original position in the stream + pios.seekg(spt, std::ios_base::beg); + return; // multiline // + } + if (tokens.size() == 2) { + // likely interleaved format + interleaved = true; + // keep reading to check. seq continues every num_taxa lines + /* + done = false; + int tcnt = 2; // we've read in two already + lcnt = 1; + while (!done) { + getline_safe(pios, line); + tcnt++; + //std::cout << "tcnt = " << tcnt << std::endl; + if (tcnt == num_taxa) { + //std::cout << "skipping line: " << line << std::endl; + tcnt = 0; + } else if (tcnt == 1) { + lcnt++; + if (line.empty()) { + // there may be an empty line between blocks + //std::cout << "skipping an empty line." << std::endl; + getline_safe(pios, line); + } + tokens = tokenize(line); + if (tokens.size() > 1) { + std::cout << "Um, I'm not sure what is happening..." << std::endl; + } else { + seq += tokens[0]; + if (seq.length() == num_char) { + done = true; + } + } + } else { + //std::cout << "skipping line: " << line << std::endl; + } + } + std::cout << "Successfully read in interleaved sequence (" + << lcnt << " lines) ;)" << std::endl; + std::cout << seq << std::endl; + */ + // return to the original position in the stream + pios.seekg(spt, std::ios_base::beg); + return; // interleaved // + } + std::cerr << "Error: unrecognized phylip format. Exiting." << std::endl; + exit(1); + } else if (num_elem > 2) { + // dealing with spaces + spaces = true; + for (unsigned int i = 1; i < tokens.size(); i++) { + seq += tokens[i]; + } + // check if that is all that is going on + if (seq.length() == num_char) { + //std::cout << "Successfully read in spaces-only sequence ;)" << std::endl; + //std::cout << seq << std::endl; + // return to the original position in the stream + pios.seekg(spt, std::ios_base::beg); + return; // just spaces // + } + // now, determine if multiline or interleaved + // if multiline, 2nd line will have (at maximum) 1 fewer element + // if interleaved, 2nd line will have the same number of elements + getline_safe(pios, line); + tokens = tokenize(line); + if (static_cast(tokens.size()) == num_elem) { + interleaved = true; + // keep reading to check. seq continues every num_taxa lines + /* + done = false; + int tcnt = 2; // we've read in two already + lcnt = 1; + while (!done) { + getline_safe(pios, line); + tcnt++; + //std::cout << "tcnt = " << tcnt << std::endl; + if (tcnt == num_taxa) { + //std::cout << "skipping line: " << line << std::endl; + tcnt = 0; + } else if (tcnt == 1) { + lcnt++; + if (line.empty()) { + // there may be an empty line between blocks + //std::cout << "skipping an empty line." << std::endl; + getline_safe(pios, line); + } + tokens = tokenize(line); + for (unsigned int i = 0; i < tokens.size(); i++) { + seq += tokens[i]; + } + if (seq.length() == num_char) { + done = true; + } + } else { + //std::cout << "skipping line: " << line << std::endl; + } + } + std::cout << "Successfully read in spaces+interleaved sequence (" + << lcnt << " lines) ;)" << std::endl; + std::cout << seq << std::endl; + */ + // return to the original position in the stream + pios.seekg(spt, std::ios_base::beg); + return; // spaces & interleaved // + } + multiline = true; + // check to make sure + /* + lcnt = 1; + done = false; + while (!done) { + for (unsigned int i = 0; i < tokens.size(); i++) { + seq += tokens[i]; + lcnt++; + } + if (seq.length() == num_char) { + done = true; + } + } + std::cout << "Successfully read in spaces+multiline sequence (" + << lcnt << " lines) ;)" << std::endl; + std::cout << seq << std::endl; + */ + // return to the original position in the stream + pios.seekg(spt, std::ios_base::beg); + return; // spaces & multiline // + } else { + std::cerr << "Error: unrecognized phylip format. Exiting." << std::endl; + exit(1); + } +} + + +// read in various phylip formats +// do you _see_ how needlessly complicated this is JF?!? +std::vector read_phylip (std::istream& pios, const int& num_taxa, + const int& file_num_char) { + + std::vector seqs; + Sequence seq; + std::string line; + bool spaces = false; + bool multiline = false; + bool interleaved = false; + bool first = true; + int lineCount = 0; + //int charCount = 0; + std::vector tokens; + std::vector names; + std::string residues; + std::string name; + + get_phylip_format(pios, static_cast(file_num_char), interleaved, + spaces, multiline); + + //std::cout << "interleaved = " << interleaved << "; spaces = " + // << spaces << "; multiline = " << multiline<< std::endl; + if (!spaces && !multiline && !interleaved) { + // simple format. standard read + //std::cout << std::endl << "processing simple contiguous sequencess" << std::endl; + while (read_next_seq_from_stream(pios, 1, line, seq)) { + seqs.push_back(seq); + } + } else if (multiline) { + if (spaces) { + //std::cout << std::endl << "processing multiline sequences with spaces" << std::endl; + while (getline_safe(pios, line)) { + if (line.empty()) { + continue; + } + tokens = tokenize(line); + if (first) { + lineCount++; + name = tokens[0]; + for (unsigned int i = 1; i < tokens.size(); i++) { + residues += tokens[i]; + } + first = false; + } else { + for (const auto & token : tokens) { + residues += token; + } + } + if (static_cast(residues.size()) == file_num_char) { + seq.set_id(name); + seq.set_sequence(residues); + seqs.push_back(seq); + residues = ""; + name = ""; + first = true; + } + } + } else { + //std::cout << std::endl << "processing multiline sequences" << std::endl; + while (getline_safe(pios, line)) { + if (line.empty()) { + continue; + } + tokens = tokenize(line); + if (first) { + lineCount++; + name = tokens[0]; + residues = tokens[1]; + first = false; + } else { + residues += tokens[0]; + } + if (static_cast(residues.size()) == file_num_char) { + seq.set_id(name); + seq.set_sequence(residues); + seqs.push_back(seq); + residues = ""; + name = ""; + first = true; + } + } + } + } else if (interleaved) { + if (spaces) { + //std::cout << std::endl << "processing interleaved sequences with spaces" << std::endl; + size_t taxcnt = 0; + lineCount = 0; + while (getline_safe(pios, line)) { + if (line.empty()) { + continue; + } + tokens = tokenize(line); + if (lineCount < num_taxa) { + name = tokens[0]; + for (unsigned int i = 1; i < tokens.size(); i++) { + residues += tokens[i]; + } + seq.set_id(name); + seq.set_sequence(residues); + seqs.push_back(seq); + residues = ""; + name = ""; + } else { + for (const auto & token : tokens) { + residues += token; + } + seqs[taxcnt].set_sequence(seqs[taxcnt].get_sequence() + residues); + taxcnt++; + if (taxcnt == static_cast(num_taxa)) { + taxcnt = 0; + } + residues = ""; + } + lineCount++; + } + } else { + //std::cout << std::endl << "processing interleaved sequences" << std::endl; + size_t taxcnt = 0; + lineCount = 0; + while (getline_safe(pios, line)) { + if (line.empty()) { + continue; + } + tokens = tokenize(line); + if (lineCount < num_taxa) { + name = tokens[0]; + residues = tokens[1]; + seq.set_id(name); + seq.set_sequence(residues); + seqs.push_back(seq); + } else { + seqs[taxcnt].set_sequence(seqs[taxcnt].get_sequence() + tokens[0]); + taxcnt++; + if (taxcnt == static_cast(num_taxa)) { + taxcnt = 0; + } + } + lineCount++; + } + } + // check seq lengths are all good + bool good = true; + unsigned int bad_idx = 0; + int bad_len = 0; + for (unsigned int i = 0; i < seqs.size(); i++) { + residues = seqs[i].get_sequence(); + if (static_cast(residues.size()) != file_num_char) { + bad_idx = i; + bad_len = static_cast(residues.size()); + good = false; + break; // break after first failure + } + } + if (!good) { + std::cerr << "Error: bad phylip file. Taxon '" << seqs[bad_idx].get_id() + << "' had " << bad_len << " characters, but " << file_num_char + << " were expected. Exiting." << std::endl; + exit(1); + } + } else if (spaces) { + //std::cout << std::endl << "processing sequences with spaces" << std::endl; + while (getline_safe(pios, line)) { + if (line.empty()) { + continue; + } + tokens = tokenize(line); + name = tokens[0]; + for (unsigned int i = 1; i < tokens.size(); i++) { + residues += tokens[i]; + } + if (static_cast(residues.size()) != file_num_char) { + std::cerr << "Error: bad phylip file. Taxon '" << name + << "' had " << residues.size() << " characters, but " << file_num_char + << " were expected. Exiting." << std::endl; + exit(1); + } + seq.set_id(name); + seq.set_sequence(residues); + seqs.push_back(seq); + residues = ""; + } + } else { + std::cerr << "Error: unrecognized phylip format. Exiting." << std::endl; + exit(1); + } + + //std::cout << "Read in " << seqs.size() << " sequences." << std::endl; + if (static_cast(seqs.size()) != num_taxa) { + std::cerr << "Error: bad phylip file. Read in " << seqs.size() + << " sequences, but expected " << num_taxa << ". Exiting." << std::endl; + exit(1); + } + return seqs; +} + + +// general reader that is used by a bunch of stuff (i.e., avoid code duplication) +// returns vector of sequences and (by reference) alphabet name +// used by programs that need the entire alignment in memory at once +// all other properties are determined elsewhere +std::vector ingest_alignment (std::istream* pios, std::string& alphaName) { + std::vector seqs; + Sequence seq; + std::string retstring; + alphaName = ""; + int ft = test_seq_filetype_stream(*pios, retstring); + int file_num_taxa = 0; // num_taxa declared in the file itself + int file_num_char = 0; // likewise for num_char + std::string file_type = get_filetype_string(ft); + + if (file_type == "nexus") { + bool is_interleaved = false; + // a bunch of required variables, not used here: + char gap, missing; + std::string symbols; + get_nexus_alignment_properties(*pios, file_num_taxa, file_num_char, + is_interleaved, alphaName, symbols, gap, missing); + //std::cout << "alphaName = " << alphaName << std::endl; + retstring = ""; // have to set so seq_reader knows we are mid-file + if (!is_interleaved) { + while (read_next_seq_from_stream(*pios, ft, retstring, seq)) { + seqs.push_back(seq); + } + } else { + seqs = read_interleaved_nexus(*pios, file_num_taxa, file_num_char); + } + } else { + bool complicated_phylip = false; + // check if we are dealing with a complicated phylip format + if (file_type == "phylip") { + get_phylip_dimensions(retstring, file_num_taxa, file_num_char); + complicated_phylip = is_complicated_phylip(*pios, file_num_char); + } + if (complicated_phylip) { + seqs = read_phylip(*pios, file_num_taxa, file_num_char); + if (alphaName.empty()) { + alphaName = seqs[0].get_alpha_name(); + } + } else { + while (read_next_seq_from_stream(*pios, ft, retstring, seq)) { + seqs.push_back(seq); + if (alphaName.empty()) { + alphaName = seq.get_alpha_name(); + } + } + if (ft == 2) { // fasta has an trailing one + seqs.push_back(seq); + } + } + } + + // some simple error-checking + if (file_num_taxa != 0) { + if (file_num_taxa != static_cast(seqs.size())) { + std::cerr << "Error: number of taxa declared in the file (" + << ") does not match the number read (" << seqs.size() + << "). Exiting." << std::endl; + exit(1); + } + } + if (file_num_char != 0) { + // if num_char comes from a file, _must_ be aligned + bool aligned = is_aligned(seqs); + if (!aligned) { + std::cerr << "Error: sequences are not aligned. Exiting." + << std::endl; + exit(0); + } + } + + return seqs; +} diff --git a/src/seq_reader.h b/src/seq_reader.h new file mode 100644 index 0000000..da4e8cc --- /dev/null +++ b/src/seq_reader.h @@ -0,0 +1,29 @@ +#ifndef PX_SEQ_READER_H +#define PX_SEQ_READER_H + +#include +#include +#include + +class Sequence; // forward declaration + +std::string get_filetype_string (const int& ft); +int test_seq_filetype_stream (std::istream& stri, std::string& retstring); +int test_char_filetype_stream (std::istream& stri, std::string& retstring); +bool read_next_seq_from_stream (std::istream& stri, int ftype, std::string& retstring, + Sequence& seq); +bool read_next_seq_char_from_stream (std::istream& stri, int ftype, + std::string& retstring, Sequence& seq); +void get_nexus_dimensions (std::istream& stri, int& num_taxa, int& num_char, bool& interleave); +void get_nexus_alignment_properties (std::istream& stri, int& num_taxa, int& num_char, + bool& interleave, std::string& alpha_name, std::string& symbols, char& gap, char& missing); +std::vector read_interleaved_nexus (std::istream& stri, int num_taxa, int num_char); +void get_phylip_dimensions (const std::string& head, int& num_taxa, int& num_char); +bool is_complicated_phylip (std::istream& pios, const int& num_char); +void get_phylip_format (std::istream& pios, const unsigned int& num_char, + bool& interleaved, bool& spaces, bool& multiline); +std::vector read_phylip (std::istream& pios, const int& num_taxa, + const int& file_num_char); +std::vector ingest_alignment (std::istream* pios, std::string& alphaName); + +#endif /* PX_SEQ_READER_H */ diff --git a/src/seq_sample.cpp b/src/seq_sample.cpp new file mode 100644 index 0000000..62da317 --- /dev/null +++ b/src/seq_sample.cpp @@ -0,0 +1,328 @@ +#include +#include +#include +#include +#include +#include +#include + +#include "sequence.h" +#include "seq_reader.h" +#include "seq_sample.h" +#include "seq_utils.h" +#include "utils.h" + + +SequenceSampler::SequenceSampler (std::istream* pios, const long int& seed, + const double& jackfract, std::string& partf):num_taxa_(0u), num_char_(0u), + jkfract_(jackfract), jackknife_(false), partitioned_(false), + num_partitioned_sites_(0u), num_partitions_(0u) { + if (seed == -1) { + srand(get_clock_seed()); + } else { + srand(static_cast(seed)); + } + if (jkfract_ != 0.0) { + jackknife_ = true; + } + if (!partf.empty()) { + partitioned_ = true; + parse_partitions(partf); + } + read_in_sequences(pios); +} + + +void SequenceSampler::read_in_sequences (std::istream* pios) { + std::string alphaName; // not used, but required by reader + seqs_ = ingest_alignment(pios, alphaName); + num_taxa_ = static_cast(seqs_.size()); + num_char_ = static_cast(seqs_[0].get_length()); + + // check that it is aligned (doesn't make sense otherwise) + if (!is_aligned(seqs_)) { + std::cerr << "Error: sequences are not aligned. Exiting." << std::endl; + exit(0); + } + + // check that partitions lengths match alignment + if (partitioned_) { + if (num_char_ != get_num_partitioned_sites()) { + std::cerr << "Error: the number of characters in the sequence (" << num_char_ << + ") does not match that in partition file (" << get_num_partitioned_sites() << + "). Exiting." << std::endl; + } + } + + // good to go + sample_sites(num_char_); +} + + +// not currently used +std::vector SequenceSampler::get_sampled_sites () const { + return sample_sites_; +} + + +std::string SequenceSampler::get_resampled_seq (const std::string& origseq) { + std::string seq; + for (size_t i = 0; i < sample_sites_.size(); i++) { + if (i == 0) { + seq = origseq[sample_sites_[i]]; + } else { + seq += origseq[sample_sites_[i]]; + } + } + return seq; +} + + +// this is done once, to populate site sample vector +void SequenceSampler::sample_sites (const unsigned int& numchar) { + if (partitioned_) { + sample_sites_ = get_partitioned_bootstrap_sites(); + } else if (!jackknife_) { + sample_sites_ = get_bootstrap_sites(numchar); + } else { + sample_sites_ = get_jackknife_sites(numchar); + } +} + + +// sample with replacement. +std::vector SequenceSampler::get_bootstrap_sites (const unsigned int& numchar) { + // numchar zero-initialized elements + size_t nc = static_cast(numchar); + std::vector randsites(nc); + + for (size_t i = 0; i < nc; i++) { + unsigned int randnum = random_int_range(0, numchar - 1); + randsites[i] = static_cast(randnum); + } + sort(randsites.begin(), randsites.end()); + + return randsites; +} + + +// set up so same composition as original +std::vector SequenceSampler::get_partitioned_bootstrap_sites () { + std::vector master(num_partitioned_sites_, 0); + for (size_t i = 0; i < num_partitions_; i++) { + size_t curNum = partitions_[i].size(); + //std::cout << "Partition #" << i << " contains " << curNum << " sites." << std::endl; + std::vector randsites = get_bootstrap_sites(static_cast(curNum)); + for (size_t j = 0; j < curNum; j ++) { + // put partitions back in same spot as original, so partition file does not need to change + master[partitions_[i][j]] = partitions_[i][randsites[j]]; + } + } + return master; +} + +// sample WITHOUT replacement. not with partitioned models +std::vector SequenceSampler::get_jackknife_sites (const unsigned int& numchar) { + auto numsample = static_cast(std::lround(numchar * jkfract_ + 0.5)); + std::vector randsites = sample_without_replacement(numchar, numsample); + return randsites; +} + + +/* +grab partition information from separate file. example: +mtDNA_1st = 1-2066\3 +TGFb2 = 5059-5721 +TODO: update to 1) RAxML and 2) Nexus style + - RAxML: DNA, gene0 = 1-4243 + - MrBayes: CHARSET gene0 = 1-4243; + * So, thrown out first token, and should work for both +*/ +void SequenceSampler::parse_partitions (std::string& partf) { + std::vector temp; + std::string line; + std::ifstream infile(partf.c_str()); + + while (getline_safe(infile, line)) { + if (line.empty()) { + continue; + } + temp = get_partition_sites(line); + partitions_.push_back(temp); + temp.clear(); + } + infile.close(); + + num_partitions_ = static_cast(partitions_.size()); + //std::cout << "Found " << num_partitions_ << " partitions." << std::endl; + calculate_num_partitioned_sites(); + + // do error-checking here: + check_valid_partitions(); +} + + +// expecting pattern: (CHARSET/DNA,) name = start-end[\3][,] +// want to be flexible with spaces/lackthereof +// guaranteed to be ordered +std::vector SequenceSampler::get_partition_sites (const std::string& part) { + std::vector sites; + std::vector tokens; + unsigned int start = 0; + unsigned int stop = 0; + unsigned int interval = 1; + + std::string delim(" -=;\t\\"); + tokenize(part, tokens, delim); + get_partition_parameters(tokens, start, stop, interval); + + unsigned int i = start; + while (i <= stop) { + sites.push_back(i); + i += interval; + } + return sites; +} + + +// opposite of get_partition_sites. want single vector listing site-specific partitions. e.g. +// 1231231231231234444444444444 +// not currently used +/* +void SequenceSampler::get_site_partitions () { + std::vector sites(static_cast(num_partitioned_sites_), 0); + for (unsigned long i = 0; i < static_cast(num_partitions_); i++) { + for (unsigned long j = 0; j < partitions_[i].size(); j++) { + sites[partitions_[i][j]] = static_cast(i); + } + } + site_partitions_ = sites; +} +*/ + + +// CHARSET GADPH = 2991-3406\3 +// after being tokenized, should be of length 4 or 5 (latter when interval) +// convert from 1-start to 0-start +void SequenceSampler::get_partition_parameters (std::vector& tokens, + unsigned int& start, unsigned int& stop, unsigned int& interval) { + auto tsize = static_cast(tokens.size()); + if (tsize < 4u || tsize > 5u) { + std::cerr << "Error: invalid/unsupported partition specification. Exiting." << std::endl; + exit(0); + } + + // ignore first token. will be either CHARSET or DNA, + partition_names_.push_back(tokens[1]); + //std::cout << "Processing partition '" << tokens[1] << "': "; + + // why is there not std::stou?!? + + if (is_number(tokens[2])) { + start = static_cast(std::stoul(tokens[2])) - 1; + //std::cout << "start = " << start; + } + if (is_number(tokens[3])) { + stop = static_cast(std::stoul(tokens[3])) - 1; + //std::cout << "; stop = " << stop; + } + if ((static_cast(tokens.size()) == 5) && is_number(tokens[4])) { + interval = static_cast(std::stoul(tokens[4])); + //std::cout << "; interval = " << interval; + } + //std::cout << std::endl; +} + + +void SequenceSampler::calculate_num_partitioned_sites () { + num_partitioned_sites_ = 0; + for (unsigned int i = 0; i < num_partitions_; i++) { + num_partitioned_sites_ += static_cast(partitions_[static_cast(i)].size()); +// std::cout << "Partition #" << i << " contains " << (int)partitions[i].size() +// << " sites:" << std::endl; +// for (unsigned int j = 0; j < partitions[i].size(); j++) { +// std::cout << partitions[i][j] << " "; +// } +// std::cout << std::endl; + } +} + + +unsigned int SequenceSampler::get_num_partitioned_sites () const { + return num_partitioned_sites_; +} + + +// should do some error-checking e.g. for 1) missing sites, 2) overlapping partitions +void SequenceSampler::check_valid_partitions () { + std::vector allSites = partitions_[0]; + for (size_t i = 1; i < static_cast(num_partitions_); i++) { + allSites.insert(allSites.end(), partitions_[i].begin(), partitions_[i].end()); + } + sort(allSites.begin(), allSites.end()); + + unsigned int max = allSites.back(); + auto count = static_cast(allSites.size()); + unsigned int diff = max - count + 1; + + if (diff != 0) { // sites are duplicated + //std::cerr << "Error in partitioning: maximum site value " << max + // << " does not equal site count " << count << "." << std::endl; + find_duplicates_missing(allSites); + } +} + + +// find sites 1) present in more than 1 partition or 2) not present in any +[[ noreturn ]] void SequenceSampler::find_duplicates_missing (const std::vector& allSites) { + std::vector unique; + std::vector duplicates; + std::vector missing; + + unsigned int maxVal = allSites.back(); + + std::vector counts(maxVal, 0); + for (unsigned int allSite : allSites) { + counts[static_cast(allSite)]++; + } + + for (unsigned int i = 0; i < maxVal; i++) { + switch (counts[i]) { + case 0: + missing.push_back(i); + break; + case 1: + unique.push_back(i); + break; + default: + duplicates.push_back(i); + } + } + + if (!duplicates.empty()) { + std::cerr << "Error: the following " << duplicates.size() + << " sites are found in more than one partition: "; + for (unsigned int duplicate : duplicates) { + std::cerr << duplicate << " "; + } + std::cerr << std::endl; + } + if (!missing.empty()) { + std::cerr << "Error: the following " << missing.size() + << " sites are not found in any partition: "; + for (unsigned int ms : missing) { + std::cerr << ms << " "; + } + std::cerr << std::endl; + } + std::cerr << "Exiting." << std::endl; + exit(0); +} + + +void SequenceSampler::write_resampled_seqs (std::ostream* poos) { + for (size_t i = 0; i < static_cast(num_taxa_); i++) { + (*poos) << ">" << seqs_[i].get_id() << std::endl; + (*poos) << get_resampled_seq(seqs_[i].get_sequence()) << std::endl; + } +} diff --git a/src/seq_sample.h b/src/seq_sample.h new file mode 100644 index 0000000..74cff6b --- /dev/null +++ b/src/seq_sample.h @@ -0,0 +1,51 @@ +#ifndef PX_SEQSAMP_H +#define PX_SEQSAMP_H + +#include +#include +#include + +#include "sequence.h" + +class SequenceSampler { +private: + unsigned int num_taxa_; + unsigned int num_char_; + double jkfract_; + bool jackknife_; + bool partitioned_; + std::vector sample_sites_; + std::vector > partitions_; + std::vector partition_names_; + std::vector site_partitions_; // not used + std::vector seqs_; + unsigned int num_partitioned_sites_; + unsigned int num_partitions_; + + std::vector get_bootstrap_sites (const unsigned int& numchar); + std::vector get_jackknife_sites (const unsigned int& numchar); + std::vector get_partitioned_bootstrap_sites (); + + void read_in_sequences (std::istream* pios); + void parse_partitions (std::string& partf); + void get_partition_parameters (std::vector& tokens, unsigned int& start, + unsigned int& stop, unsigned int& interval); + std::vector get_partition_sites (const std::string& part); + void check_valid_partitions (); + unsigned int get_num_partitioned_sites () const; + void calculate_num_partitioned_sites (); + //void get_site_partitions (); // not currently used + [[ noreturn ]] void find_duplicates_missing (const std::vector& allSites); + +public: + SequenceSampler (std::istream* pios, const long int& seed, const double& jackfract, + std::string& partf); + std::vector get_sampled_sites () const; + void sample_sites (const unsigned int& numchar); + std::string get_resampled_seq (const std::string& origseq); + + void write_resampled_seqs (std::ostream* poos); + //~SequenceResampler(); +}; + +#endif /* PX_SEQSAMP_H */ diff --git a/src/seq_utils.cpp b/src/seq_utils.cpp new file mode 100644 index 0000000..4dbdc08 --- /dev/null +++ b/src/seq_utils.cpp @@ -0,0 +1,671 @@ +#include +#include +#include +#include +#include +#include +#include + +#include "seq_utils.h" +#include "sequence.h" +#include "utils.h" + + +// IUPAC codes +std::string dnachars_with_ambiguous = "ACGTURYSWKMBDHVN"; +std::string protchars = "ABCDEFGHIKLMNPQRSTVWXYZ"; + + +/** + * IUPAC ambiguity codes + * procedure to get the character of a nucleotide + * from the set of positions + * An empty set contains only gaps. An N has a count for all nucleotides. + * When a site has valid nucleotides and gaps, the gaps are ignored. + */ +char get_dna_from_pos (const std::set& ins) { + if (ins.count(0) == 1) { + if (ins.count(1) == 1) { + if (ins.count(2) == 1) { + if (ins.count(3) == 1) { + return 'N'; + } + return 'V'; + } + if (ins.count(3) == 1) { + return 'H'; + } + return 'M'; + } + if (ins.count(2) == 1) { + if (ins.count(3) == 1) { + return 'D'; + } + return 'R'; + } + if (ins.count(3) == 1) { + return 'W'; + } + return 'A'; + } + if (ins.count(1) == 1) { + if (ins.count(2) == 1) { + if (ins.count(3) == 1) { + return 'B'; + } + return 'S'; + } + if (ins.count(3) == 1) { + return 'Y'; + } + return 'C'; + } + if (ins.count(2) == 1) { + if (ins.count(3) == 1) { + return 'K'; + } + return 'G'; + } + if (ins.count(3) == 1) { + return 'T'; + } + return('-'); +} + + +std::set get_dna_pos (char inc) { + std::set ret; + inc = static_cast(toupper(inc)); + if (inc == 'A') { + ret.insert(0); + } else if (inc == 'C') { + ret.insert(1); + } else if (inc == 'G') { + ret.insert(2); + } else if (inc == 'T') { + ret.insert(3); + //} else if (inc == '-' || inc == 'N') { + } else if (inc == 'N') { + ret.insert(0); + ret.insert(1); + ret.insert(2); + ret.insert(3); + } else if (inc == 'Y') { + ret.insert(1); + ret.insert(3); + } else if (inc == 'R') { + ret.insert(0); + ret.insert(2); + } else if (inc == 'W') { + ret.insert(0); + ret.insert(3); + } else if (inc == 'M') { + ret.insert(0); + ret.insert(1); + } else if (inc == 'B') { + ret.insert(1); + ret.insert(2); + ret.insert(3); + } else if (inc == 'V') { + ret.insert(0); + ret.insert(1); + ret.insert(2); + } else if (inc == 'S') { + ret.insert(1); + ret.insert(2); + } else if (inc == 'K') { + ret.insert(2); + ret.insert(3); + } else if (inc == 'H') { + ret.insert(0); + ret.insert(1); + ret.insert(3); + } + return ret; +} + + +char get_prot_char (const std::set& inc) { + // if any is missing, consensus is missing + if (inc.count('X') == 1 || inc.count('-') == 1) { + return 'X'; + } + if (inc.size() == 1) { + return *inc.begin(); + } + + // there are a handful of ambiguity codes + // B = Aspartic acid (D) or Asparagine (N) + // Z = Glutamine (Q) or Glutamic acid (E) + int B = static_cast(inc.count('D') + inc.count('N') + inc.count('B')); + int Z = static_cast(inc.count('Q') + inc.count('E') + inc.count('Z')); + + if (B == static_cast(inc.size())) { + return 'B'; + } + if (Z == static_cast(inc.size())) { + return 'Z'; + } + + return 'X'; +} + + +/** + * string alpha: either "DNA" or "AA" +*/ +std::string consensus_seq (std::vector& seqs, std::string& alpha) { + bool aligned = is_aligned(seqs); + if (!aligned) { + std::cerr << "Error: sequences are not aligned. Exiting." << std::endl; + exit(0); + } + unsigned int seqlength = seqs[0].get_length(); + std::string retstring; + if (alpha == "DNA") { + for (unsigned int i = 0; i < seqlength; i++) { + std::set fullset; + for (auto & seq : seqs) { + std::set tset = get_dna_pos(seq.get_sequence()[i]); + fullset.insert(tset.begin(), tset.end()); + } + retstring += get_dna_from_pos(fullset); + } + } else if (alpha == "AA") { + for (unsigned int i = 0; i < seqlength; i++) { + std::set fullset; + //bool ambig = false; // doesn't do anything + for (auto & seq : seqs) { + fullset.insert(seq.get_sequence()[i]); + // break early if any ambiguous code is encountered + if (seq.get_sequence()[i] == 'X' || seq.get_sequence()[i] == '-') { + //ambig = true; + break; + } + } + retstring += get_prot_char(fullset); + } + } else { + std::cerr << "Error: cannot make consensus of sequence type '" << alpha + << "'. Exiting." << std::endl; + exit(0); + } + return retstring; +} + + +/** + * Returns a map of DNA + * + */ +char single_dna_complement (char inc) { + inc = static_cast(toupper(inc)); + if (inc == 'A') { + return 'T'; + } + if (inc == 'T') { + return 'A'; + } + if (inc == 'U') { + return 'A'; + } + if (inc == 'G') { + return 'C'; + } + if (inc == 'C') { + return 'G'; + } + if (inc == 'Y') { + return 'R'; + } + if (inc == 'R') { + return 'Y'; + } + if (inc == 'S') { + return 'S'; + } + if (inc == 'W') { + return 'W'; + } + if (inc == 'K') { + return 'M'; + } + if (inc == 'M') { + return 'K'; + } + if (inc == 'B') { + return 'V'; + } + if (inc == 'D') { + return 'H'; + } + if (inc == 'H') { + return 'D'; + } + if (inc == 'V') { + return 'B'; + } + return 'N'; +} + + +void write_phylip_alignment (std::vector& seqs, + const bool& uppercase, std::ostream * ostr) { + bool aligned = is_aligned(seqs); + if (!aligned) { + std::cerr << "Error: sequences are not aligned. Exiting." << std::endl; + exit(0); + } + unsigned int seqlength = seqs[0].get_length(); + // header: num_taxa, num_char + (*ostr) << seqs.size() << " " << seqlength << std::endl; + + for (auto & seq : seqs) { + if (uppercase) { + std::string terp = seq.seq_to_upper(); + (*ostr) << seq.get_id() << "\t" << terp << std::endl; + } else { + (*ostr) << seq.get_id() << "\t" << seq.get_sequence() << std::endl; + } + } +} + + +/** + * this is not for concatenation. only single gene regions + * another one needs to be written for concatenation + */ +void write_nexus_alignment (std::vector& seqs, const bool& uppercase, + std::ostream * ostr) { + unsigned int seqlength = seqs[0].get_length(); + std::string datatype = seqs[0].get_alpha_name(); + std::string symbols; // not required for binary (default), protein, DNA + //std::cout << std::endl << "datatype = " << datatype << std::endl << std::endl; + + if (datatype == "AA") { // "AA" is not a valid Nexus datatype + datatype = "PROTEIN"; + } + if (datatype == "BINARY") { + datatype = "STANDARD"; + symbols = "01"; // not strictly necessary, as this is the default set. but doesn't hurt + } + if (datatype == "MULTI") { + datatype = "STANDARD"; + //std::cout << "assembling symbols now" << std::endl; + std::string combined; + for (auto & seq : seqs) { + if (uppercase) { + combined += seq.seq_to_upper(); + } else { + combined += seq.get_sequence(); + } + } + symbols = get_alphabet_from_sequence(combined); + symbols.erase(std::remove(symbols.begin(), symbols.end(), '-'), symbols.end()); + symbols.erase(std::remove(symbols.begin(), symbols.end(), '?'), symbols.end()); + } + + bool aligned = is_aligned(seqs); + if (!aligned) { + std::cerr << "Error: sequences are not aligned. Exiting." << std::endl; + exit(0); + } + + (*ostr) << "#NEXUS" << std::endl; + (*ostr) << "BEGIN DATA;\n\tDIMENSIONS NTAX="; + (*ostr) << seqs.size() << " NCHAR=" << seqlength << ";" << std::endl; + (*ostr) << "\tFORMAT DATATYPE=" << datatype; + if (!symbols.empty()) { + (*ostr) << " SYMBOLS=\"" << symbols << "\""; + } + // removing 'INTERLEAVE=NO` as it appears to not be NCL-compliant + (*ostr) << " GAP=- MISSING=?;" << std::endl; + (*ostr) << "\tMATRIX\n" << std::endl; + for (auto & seq : seqs) { + // MrBayes is not Nexus-compliant, so using a "safe" version + if (uppercase) { + std::string terp = seq.seq_to_upper(); + (*ostr) << get_valid_nexus_label(seq.get_id()) << "\t" << terp << std::endl; + } else { + (*ostr) << get_valid_nexus_label(seq.get_id()) << "\t" << seq.get_sequence() << std::endl; + } + //(*ostr) << seq.get_id() << "\t" << seq.get_sequence() << std::endl; + } + (*ostr) << ";\nend;" << std::endl; +} + + +/** + * given a vector of seqs, this will make, for each seq a vector + * that would be 000000100000 for each codon that is present + * this would be for each site, so reuse your vectors! + */ +// this is not currently used +void create_vector_seq_codon_state_reconstructor (std::vector& origseqs, + std::vector& sr_seqs, int site, std::map >& codon_pos) { + unsigned int start = static_cast(site) * 3u; + for (size_t i = 0; i < origseqs.size(); i++) { + std::string codon = origseqs[i].get_sequence().substr(start, 3); + std::string setsq(61, '0'); + + for (int j : codon_pos[codon]) { + setsq.replace(static_cast(codon_pos[codon][static_cast(j)]), 1, "1"); + } + sr_seqs[i].set_sequence(setsq); + } +} + + +/** + * given a vector of seqs, this will make, for each seq a vector + * that would be 000000100000 for each codon that is present + * this would be for each site, so reuse your vectors! + */ +void create_vector_seq_codon_state_reconstructor_all_site (std::vector& origseqs, + std::vector& sr_seqs, int site, std::map >& codon_pos) { + unsigned int start = static_cast(site) * 3u; + for (unsigned int i = 0; i < origseqs.size(); i++) { + std::string codon = origseqs[i].get_sequence().substr(start, 3); + std::string setsq(61, '0'); + + for (int j : codon_pos[codon]) { + setsq.replace(static_cast(codon_pos[codon][static_cast(j)]), 1, "1"); + } + sr_seqs[i].set_sequence(setsq); + } +} + + +// get set of names from an alignment +std::vector collect_names (const std::vector& algnmnt) { + std::vector names(algnmnt.size(), ""); + for (unsigned int i = 0; i < algnmnt.size(); i++) { + names[i] = algnmnt[i].get_id(); + } + return names; +} + + +bool check_binary_sequence (const std::string& seq) { + bool binary = false; + if (seq.find_first_not_of("01-?") == std::string::npos) { + binary = true; + } + return binary; +} + + +// get all unique character states +std::string get_alphabet_from_sequence (const std::string& instr) { + std::string uniqueChars; + std::string sorted = instr; + std::sort(sorted.begin(), sorted.end()); + std::unique_copy(sorted.begin(), sorted.end(), std::back_inserter(uniqueChars)); + return uniqueChars; +} + + +bool is_dna_char (char& residue) { + bool isDNA = false; + std::size_t found = dnachars_with_ambiguous.find(residue); + if (found != std::string::npos) { + isDNA = true; + } + return isDNA; +} + + +bool is_prot_char (char& residue) { + bool isAA = false; + std::size_t found = protchars.find(residue); + if (found != std::string::npos) { + isAA = true; + } + return isAA; +} + + +// ignore ambiguity codes +int count_dna_chars (const std::string& str) { + int ndna = 0; + std::string dnaChars = "ACGT"; + for (char dnaChar : dnaChars) { + ndna += std::count(str.begin(), str.end(), dnaChar); + } + return ndna; +} + + +bool is_aligned (const std::vector& seqs) { + bool aligned = true; + bool first = true; + Sequence seq; + unsigned int num_char = 0; + for (const auto & sq : seqs) { + seq = sq; + if (!first) { + if (seq.get_length() != num_char) { + aligned = false; + } + } else { + num_char = seq.get_length(); + first = false; + } + } + return aligned; +} + + +bool is_codon_alignment (const std::vector& seqs) { + bool codons = true; + Sequence seq; + for (const auto & sq : seqs) { + seq = sq; + if (static_cast(seq.get_length()) % 3 != 0) { + codons = false; + } + } + return codons; +} + + +// these are not currently used +/* +void populate_codon_list (std::vector * codon_list) { + (*codon_list).emplace_back("TTT"); + (*codon_list).emplace_back("TTC"); + (*codon_list).emplace_back("TTA"); + (*codon_list).emplace_back("TTG"); + (*codon_list).emplace_back("TCT"); + (*codon_list).emplace_back("TCC"); + (*codon_list).emplace_back("TCA"); + (*codon_list).emplace_back("TCG"); + (*codon_list).emplace_back("TAT"); + (*codon_list).emplace_back("TAC"); + (*codon_list).emplace_back("TGT"); + (*codon_list).emplace_back("TGC"); + (*codon_list).emplace_back("TGG"); + (*codon_list).emplace_back("CTT"); + (*codon_list).emplace_back("CTC"); + (*codon_list).emplace_back("CTA"); + (*codon_list).emplace_back("CTG"); + (*codon_list).emplace_back("CCT"); + (*codon_list).emplace_back("CCC"); + (*codon_list).emplace_back("CCA"); + (*codon_list).emplace_back("CCG"); + (*codon_list).emplace_back("CAT"); + (*codon_list).emplace_back("CAC"); + (*codon_list).emplace_back("CAA"); + (*codon_list).emplace_back("CAG"); + (*codon_list).emplace_back("CGT"); + (*codon_list).emplace_back("CGC"); + (*codon_list).emplace_back("CGA"); + (*codon_list).emplace_back("CGG"); + (*codon_list).emplace_back("ATT"); + (*codon_list).emplace_back("ATC"); + (*codon_list).emplace_back("ATA"); + (*codon_list).emplace_back("ATG"); + (*codon_list).emplace_back("ACT"); + (*codon_list).emplace_back("ACC"); + (*codon_list).emplace_back("ACA"); + (*codon_list).emplace_back("ACG"); + (*codon_list).emplace_back("AAT"); + (*codon_list).emplace_back("AAC"); + (*codon_list).emplace_back("AAA"); + (*codon_list).emplace_back("AAG"); + (*codon_list).emplace_back("AGT"); + (*codon_list).emplace_back("AGC"); + (*codon_list).emplace_back("AGA"); + (*codon_list).emplace_back("AGG"); + (*codon_list).emplace_back("GTT"); + (*codon_list).emplace_back("GTC"); + (*codon_list).emplace_back("GTA"); + (*codon_list).emplace_back("GTG"); + (*codon_list).emplace_back("GCT"); + (*codon_list).emplace_back("GCC"); + (*codon_list).emplace_back("GCA"); + (*codon_list).emplace_back("GCG"); + (*codon_list).emplace_back("GAT"); + (*codon_list).emplace_back("GAC"); + (*codon_list).emplace_back("GAA"); + (*codon_list).emplace_back("GAG"); + (*codon_list).emplace_back("GGT"); + (*codon_list).emplace_back("GGC"); + (*codon_list).emplace_back("GGA"); + (*codon_list).emplace_back("GGG"); +} + + +// also not used +void populate_map_codon_dict (std::map * codon_dict) { + (*codon_dict)["TTT"] = "F"; + (*codon_dict)["TTC"] = "F"; + (*codon_dict)["TTA"] = "L"; + (*codon_dict)["TTG"] = "L"; + (*codon_dict)["TCT"] = "S"; + (*codon_dict)["TCC"] = "S"; + (*codon_dict)["TCA"] = "S"; + (*codon_dict)["TCG"] = "S"; + (*codon_dict)["TAT"] = "Y"; + (*codon_dict)["TAC"] = "Y"; + (*codon_dict)["TGT"] = "C"; + (*codon_dict)["TGC"] = "C"; + (*codon_dict)["TGG"] = "W"; + (*codon_dict)["CTT"] = "L"; + (*codon_dict)["CTC"] = "L"; + (*codon_dict)["CTA"] = "L"; + (*codon_dict)["CTG"] = "L"; + (*codon_dict)["CCT"] = "P"; + (*codon_dict)["CCC"] = "P"; + (*codon_dict)["CCA"] = "P"; + (*codon_dict)["CCG"] = "P"; + (*codon_dict)["CAT"] = "H"; + (*codon_dict)["CAC"] = "H"; + (*codon_dict)["CAA"] = "Q"; + (*codon_dict)["CAG"] = "Q"; + (*codon_dict)["CGT"] = "R"; + (*codon_dict)["CGC"] = "R"; + (*codon_dict)["CGA"] = "R"; + (*codon_dict)["CGG"] = "R"; + (*codon_dict)["ATT"] = "I"; + (*codon_dict)["ATC"] = "I"; + (*codon_dict)["ATA"] = "I"; + (*codon_dict)["ATG"] = "M"; + (*codon_dict)["ACT"] = "T"; + (*codon_dict)["ACC"] = "T"; + (*codon_dict)["ACA"] = "T"; + (*codon_dict)["ACG"] = "T"; + (*codon_dict)["AAT"] = "N"; + (*codon_dict)["AAC"] = "N"; + (*codon_dict)["AAA"] = "K"; + (*codon_dict)["AAG"] = "K"; + (*codon_dict)["AGT"] = "S"; + (*codon_dict)["AGC"] = "S"; + (*codon_dict)["AGA"] = "R"; + (*codon_dict)["AGG"] = "R"; + (*codon_dict)["GTT"] = "V"; + (*codon_dict)["GTC"] = "V"; + (*codon_dict)["GTA"] = "V"; + (*codon_dict)["GTG"] = "V"; + (*codon_dict)["GCT"] = "A"; + (*codon_dict)["GCC"] = "A"; + (*codon_dict)["GCA"] = "A"; + (*codon_dict)["GCG"] = "A"; + (*codon_dict)["GAT"] = "D"; + (*codon_dict)["GAC"] = "D"; + (*codon_dict)["GAA"] = "E"; + (*codon_dict)["GAG"] = "E"; + (*codon_dict)["GGT"] = "G"; + (*codon_dict)["GGC"] = "G"; + (*codon_dict)["GGA"] = "G"; + (*codon_dict)["GGG"] = "G"; +} + + +// also also not used +void populate_map_codon_indices (std::map > * codon_position) { + (*codon_position)["TTT"] = {0}; + (*codon_position)["TTC"] = {1}; + (*codon_position)["TTA"] = {2}; + (*codon_position)["TTG"] = {3}; + (*codon_position)["TCT"] = {4}; + (*codon_position)["TCC"] = {5}; + (*codon_position)["TCA"] = {6}; + (*codon_position)["TCG"] = {7}; + (*codon_position)["TAT"] = {8}; + (*codon_position)["TAC"] = {9}; + (*codon_position)["TGT"] = {10}; + (*codon_position)["TGC"] = {11}; + (*codon_position)["TGG"] = {12}; + (*codon_position)["CTT"] = {13}; + (*codon_position)["CTC"] = {14}; + (*codon_position)["CTA"] = {15}; + (*codon_position)["CTG"] = {16}; + (*codon_position)["CCT"] = {17}; + (*codon_position)["CCC"] = {18}; + (*codon_position)["CCA"] = {19}; + (*codon_position)["CCG"] = {20}; + (*codon_position)["CAT"] = {21}; + (*codon_position)["CAC"] = {22}; + (*codon_position)["CAA"] = {23}; + (*codon_position)["CAG"] = {24}; + (*codon_position)["CGT"] = {25}; + (*codon_position)["CGC"] = {26}; + (*codon_position)["CGA"] = {27}; + (*codon_position)["CGG"] = {28}; + (*codon_position)["ATT"] = {29}; + (*codon_position)["ATC"] = {30}; + (*codon_position)["ATA"] = {31}; + (*codon_position)["ATG"] = {32}; + (*codon_position)["ACT"] = {33}; + (*codon_position)["ACC"] = {34}; + (*codon_position)["ACA"] = {35}; + (*codon_position)["ACG"] = {36}; + (*codon_position)["AAT"] = {37}; + (*codon_position)["AAC"] = {38}; + (*codon_position)["AAA"] = {39}; + (*codon_position)["AAG"] = {40}; + (*codon_position)["AGT"] = {41}; + (*codon_position)["AGC"] = {42}; + (*codon_position)["AGA"] = {43}; + (*codon_position)["AGG"] = {44}; + (*codon_position)["GTT"] = {45}; + (*codon_position)["GTC"] = {46}; + (*codon_position)["GTA"] = {47}; + (*codon_position)["GTG"] = {48}; + (*codon_position)["GCT"] = {49}; + (*codon_position)["GCC"] = {50}; + (*codon_position)["GCA"] = {51}; + (*codon_position)["GCG"] = {52}; + (*codon_position)["GAT"] = {53}; + (*codon_position)["GAC"] = {54}; + (*codon_position)["GAA"] = {55}; + (*codon_position)["GAG"] = {56}; + (*codon_position)["GGT"] = {57}; + (*codon_position)["GGC"] = {58}; + (*codon_position)["GGA"] = {59}; + (*codon_position)["GGG"] = {60}; +} +*/ diff --git a/src/seq_utils.h b/src/seq_utils.h new file mode 100644 index 0000000..b35c182 --- /dev/null +++ b/src/seq_utils.h @@ -0,0 +1,41 @@ +#ifndef PX_SEQ_UTILS_H +#define PX_SEQ_UTILS_H + +#include +#include +#include +#include +#include + +class Sequence; // forward declarations + + +std::string guess_alignment_type (std::string& sequence); +char get_dna_from_pos (const std::set& ins); +char get_prot_char (const std::set& inc); +std::set get_dna_pos (char); +std::string consensus_seq (std::vector&, std::string& alpha); +char single_dna_complement (char inc); +void write_phylip_alignment (std::vector& seqs, const bool& uppercase, std::ostream * ostr); +void write_nexus_alignment (std::vector& seqs, const bool& uppercase, std::ostream * ostr); +void create_vector_seq_codon_state_reconstructor_all_site(std::vector& origseqs, + std::vector& sr_seqs, int site, std::map >& codon_pos); +std::vector collect_names (const std::vector& algnmnt); +void create_vector_seq_codon_state_reconstructor (std::vector& origseqs, + std::vector& sr_seqs, int site, std::map >& codon_pos); +bool check_binary_sequence (const std::string& seq); +std::string get_alphabet_from_sequence (const std::string& instr); +bool is_dna_char (char& residue); +bool is_prot_char (char& residue); +int count_dna_chars (const std::string& str); +bool is_aligned (const std::vector& seqs); +bool is_codon_alignment (const std::vector& seqs); + +// not used +/* +void populate_codon_list (std::vector * codon_list); +void populate_map_codon_dict (std::map * codon_dict); +void populate_map_codon_indices (std::map > * codon_position); +*/ + +#endif /* PX_SEQ_UTILS_H */ diff --git a/src/sequence.cpp b/src/sequence.cpp new file mode 100644 index 0000000..62929f3 --- /dev/null +++ b/src/sequence.cpp @@ -0,0 +1,289 @@ +/* + * This is an extremely stripped down sequence class that is just meant to be + * transparent and lightweight. As functionality increases, so will the + * complexity of the class. + * + */ + +#include +#include +#include +#include + +#include "sequence.h" +#include "utils.h" +#include "seq_utils.h" + + +// this is the constructor almost always used +Sequence::Sequence ():length_(0), aligned_(), alphabet_(NA) {} + + +Sequence::Sequence (std::string _id, std::string _seq, bool _aligned):id_(std::move(_id)), + seq_(std::move(_seq)), aligned_(), alphabet_(NA) { + length_ = static_cast(seq_.size()); + set_aligned(_aligned); + infer_alpha(); +} + + +// *** this doesn't seem to be used *** +Sequence::Sequence (std::string _id, std::string _seq):id_(std::move(_id)), + seq_(std::move(_seq)), alphabet_(NA) { + length_ = static_cast(seq_.size()); + aligned_ = false; + infer_alpha(); +} + + +// *** this doesn't seem to be used *** +seqAlpha Sequence::get_alpha () const { + return alphabet_; +} + + +std::string Sequence::get_alpha_name () { + if (alphabet_ == NA) { + infer_alpha(); + } + if (alphabet_ == DNA) { + return "DNA"; + } + if (alphabet_ == AA) { + return "AA"; + } + if (alphabet_ == BINARY) { + return "BINARY"; // i don't believe this _can_ be true atm + } + if (alphabet_ == MULTI) { + return "MULTI"; + } + return ""; +} + + +void Sequence::set_alpha (seqAlpha s) { + alphabet_ = s; +} + + +// figure out the sequence type. +// not perfect: for _very_ short AA seqs it is possible all chars are valid nuc chars +void Sequence::infer_alpha () { + std::string str = seq_; + + // check for binary data + if (check_binary_sequence(str)) { + set_alpha(BINARY); + return; + } + + // do quick check for 'standard' data: will contain numbers + if (str.find_first_of("0123456789") != std::string::npos) { + set_alpha(MULTI); + return; + } + + int dnaHit = 0; + int proteinHit = 0; + int validChars = 0; + + // dnachars = "ACGTURYSWKMBDHVN"; + // protchars = "ABCDEFGHIKLMNPQRSTVWXYZ"; + + str = string_to_upper(str); + + // grab unique characters + std::string uniqueChars = get_alphabet_from_sequence(str); + + // if the above fails (e.g., RNA), do the former check + for (char & uniqueChar : uniqueChars) { + int num = static_cast(std::count(str.begin(), str.end(), uniqueChar)); + if (is_prot_char(uniqueChar)) { + proteinHit += num; + validChars += num; + // DNA chars are a subset of protein chars + if (is_dna_char(uniqueChar)) { + dnaHit += num; + } + } + } + + if (uniqueChars.find_first_not_of(dnachars_with_ambiguous) == std::string::npos) { + set_alpha(DNA); + // edge case: short protein alignment which by chance contains DNA-valid states + int nDNA = count_dna_chars(str); + if ( (static_cast(nDNA) / static_cast(validChars)) < 0.5) { + set_alpha(AA); + } + return; + } + if (uniqueChars.find_first_not_of(protchars) == std::string::npos) { + set_alpha(AA); + return; + } + + if (proteinHit > dnaHit) { + set_alpha(AA); + } else if (proteinHit == dnaHit) { + set_alpha(DNA); + } + +} + + +bool Sequence::is_aligned () const { + return aligned_; +} + + +std::string Sequence::get_sequence () const { + return seq_; +} + + +std::string Sequence::get_id () const { + return id_; +} + + +unsigned int Sequence::get_length () { + if (length_ == 0) { + length_ = static_cast(seq_.size()); + } + return length_; +} + + +void Sequence::add_cont_char (double _num) { + cont_chars_.push_back(_num); +} + + +double Sequence::get_cont_char (int _index) { + return cont_chars_[static_cast(_index)]; +} + + +int Sequence::get_num_cont_char () { + return static_cast(cont_chars_.size()); +} + + +void Sequence::clear_cont_char () { + cont_chars_.clear(); +} + + +void Sequence::add_multistate_char(int _num) { + multistate_chars_.push_back(_num); +} + + +int Sequence::get_multistate_char (int _index) { + return multistate_chars_[static_cast(_index)]; +} + + +int Sequence::get_num_multistate_char () { + return static_cast(multistate_chars_.size()); +} + + +void Sequence::set_sequence (std::string _seq) { + seq_ = std::move(_seq); + length_ = static_cast(seq_.size()); +} + + +void Sequence::set_id (std::string _id) { + id_ = std::move(_id); +} + + +void Sequence::set_aligned (bool _align) { + aligned_ = _align; +} + + +std::string Sequence::reverse_complement () { + std::string rcomp = seq_; + for (unsigned int i = 0; i < rcomp.size(); i++) { + rcomp.replace(i, 1, 1, single_dna_complement(seq_[seq_.size()-i-1])); + } + return rcomp; +} + + +void Sequence::perm_reverse_complement () { + std::string rcomp = seq_; + for (unsigned int i = 0; i < rcomp.size(); i++) { + rcomp.replace(i, 1, 1, single_dna_complement(seq_[seq_.size()-i-1])); + } + seq_ = rcomp; +} + + +void Sequence::set_qualstr (std::string& stri, int offset) { + qualarr_.clear(); + qualstr_ = stri; + for (char c : stri) { + qualarr_.push_back((static_cast(c)) - offset); + } +} + + +std::vector Sequence::get_qualarr () const { + return qualarr_; +} + + +double Sequence::get_qualarr_mean () { + return v_mean(qualarr_); +} + + +std::string Sequence::get_fasta () { + std::string retstr; + retstr.append(">"); + retstr.append(id_); + retstr.append("\n"); + retstr.append(seq_); + retstr.append("\n"); + return retstr; +} + + +std::string Sequence::get_fasta (const bool& uppercase) { + std::string retstr; + retstr.append(">"); + retstr.append(id_); + retstr.append("\n"); + if (uppercase) { + retstr.append(seq_to_upper()); + } else { + retstr.append(seq_); + } + retstr.append("\n"); + return retstr; +} + + +std::string Sequence::get_fastq () { + std::string retstr; + retstr.append("@"); + retstr.append(id_); + retstr.append("\n"); + retstr.append(seq_); + retstr.append("\n+\n"); + retstr.append(qualstr_); + retstr.append("\n"); + return retstr; +} + + +// returns a transformed copy in case original is to be retained +std::string Sequence::seq_to_upper () { + std::string outseq = string_to_upper(seq_); + return outseq; +} diff --git a/src/sequence.h b/src/sequence.h new file mode 100644 index 0000000..2d08ec3 --- /dev/null +++ b/src/sequence.h @@ -0,0 +1,63 @@ +#ifndef PX_SEQUENCE_H +#define PX_SEQUENCE_H + +#include +#include + + +typedef enum { + DNA = 0, AA = 1, BINARY = 2, MULTI = 3, CODON = 4, NA = 5 +} seqAlpha; + +extern std::string dnachars_with_ambiguous; +extern std::string protchars; + +class Sequence { + // these member variables should have lagging underscores +private: + std::string id_; + std::string seq_; + unsigned int length_; + bool aligned_; + std::vector qualarr_; + std::string qualstr_; + seqAlpha alphabet_; + std::vector cont_chars_; + std::vector multistate_chars_; + +public: + Sequence (); + Sequence (std::string, std::string, bool); + Sequence (std::string, std::string); + seqAlpha get_alpha () const; + std::string get_alpha_name (); + void set_alpha (seqAlpha); + + void infer_alpha (); + + bool is_aligned () const; + std::string get_sequence ()const; + std::string get_id ()const; + unsigned int get_length (); + void add_cont_char (double _num); + double get_cont_char (int _index); + int get_num_cont_char (); + void clear_cont_char (); + void add_multistate_char (int _num); + int get_multistate_char (int _index); + int get_num_multistate_char (); + void set_sequence (std::string _seq); + void set_id (std::string _id); + void set_aligned (bool _align); + void set_qualstr (std::string&, int); + std::vector get_qualarr () const; + double get_qualarr_mean (); + std::string reverse_complement (); + void perm_reverse_complement (); + std::string get_fasta (); + std::string get_fasta (const bool& uppercase); + std::string get_fastq (); + std::string seq_to_upper (); + +}; +#endif /* PX_SEQUENCE_H */ diff --git a/src/sstat.cpp b/src/sstat.cpp new file mode 100644 index 0000000..af5f43c --- /dev/null +++ b/src/sstat.cpp @@ -0,0 +1,129 @@ +#include +#include +#include +#include + +#include "utils.h" +#include "sequence.h" +#include "sstat.h" + + +MultinomialSeqStat::MultinomialSeqStat (std::vector& seqs):num_char_(0), + test_statistic_(0.0l), seqs_(seqs) { + num_taxa_ = static_cast(seqs_.size()); + + //std::cout << "Read in " << num_taxa_ << " sequences!" << std::endl; + + if (!checked_aligned()) { + std::cerr << "Error: cannot calculate statistic as sequences are not aligned. Exiting." << std::endl; + exit(0); + } + + collect_site_patters(); + calculateTestStatistic(); +} + + +bool MultinomialSeqStat::checked_aligned () { + bool is_aligned_ = true; + std::vector seq_lengths(num_taxa_, 0); + + // gather all lengths + for (unsigned long i = 0; i < num_taxa_; i++) { + seq_lengths[i] = seqs_[i].get_length(); + } + + // check if all seqs are the same length + if (std::adjacent_find(seq_lengths.begin(), seq_lengths.end(), + std::not_equal_to<>()) == seq_lengths.end()) { + is_aligned_ = true; + num_char_ = seq_lengths[0]; + } else { + is_aligned_ = false; + } + return is_aligned_; +} + + +void MultinomialSeqStat::collect_site_patters () { + std::vector inputPatterns; + for (unsigned long i = 0; i < num_char_; i++) { + char a = seqs_[0].get_sequence().at(i); + std::string pat(1, a); + for (unsigned long j = 1; j < num_taxa_; j++) { + char residue = seqs_[j].get_sequence().at(i); + pat += residue; + } + inputPatterns.push_back(pat); + } + // *** Sort - enables more rapid pattern count enumeration later on *** + sort(inputPatterns.begin(), inputPatterns.end()); + + // process raw counts + //int numUniquePatterns = 0; + +// Iterate from first site to last site + for (std::vector::const_iterator iterSites = inputPatterns.begin(); iterSites < inputPatterns.end(); ++iterSites) { + std::string currentPattern = *iterSites; + unsigned long currentPatternCount = 1u; + +// Check if pattern n+1 == pattern n; if so, update count, test next site; if not, log current count/pattern; MUCH FASTER!! +// - Need to check if last site, lest risk overshooting vector boundary + bool siteMatched = true; + while (siteMatched) { + if (iterSites != inputPatterns.end() - 1) { // Last site + ++iterSites; + if (*iterSites == currentPattern) { + currentPatternCount++; + } else { // Exit loop, counted all matching patterns + --iterSites; + siteMatched = false; + } + } else { // At last pattern + siteMatched = false; + } + } +// No need to check against stored sites, as vector has been sorted in function 'getInputPatterns' + //patterns_and_counts_.push_back(std::make_pair(currentPattern, currentPatternCount)); + patterns_and_counts_.emplace_back(currentPattern, currentPatternCount); + //numUniquePatterns++; + } + //std::cout << "Found " << numUniquePatterns << " unique site patterns." << std::endl; +} + + +// Calculate T(X) test statistic +void MultinomialSeqStat::calculateTestStatistic () { +/*---------------------------------------------------------------------------------------------------------- +| Calculate summary statistics from Bollback (2002) +| 1) Calculate n*ln(n) for each pattern +| 2) Sum values above +| 3) Subtract N*ln(N) from sum +*/ + long double tempResult = 0.0L; + long double finalResult = 0.0L; + size_t numPatterns = patterns_and_counts_.size(); + + for (size_t iterStoredPat = 0; iterStoredPat < numPatterns; ++iterStoredPat) { + if (patterns_and_counts_[iterStoredPat].second != 0) { + tempResult = (patterns_and_counts_[iterStoredPat].second)*(log(patterns_and_counts_[iterStoredPat].second)); + finalResult += tempResult; + } + } + tempResult = static_cast(num_char_*(log(num_char_))); + /* + std::cout << "'numIncludedChar*log(numIncludedChar)' calculated as: " << tempResult << std::endl; + std::cout << "'final sum' is: " << finalResult << std::endl; + std::cout << "'numIncludedChar' is: " << num_char_ << std::endl; + std::cout << "'log(numIncludedChar)' is: " << log(num_char_) << std::endl; + */ + finalResult = finalResult - tempResult; + //std::cout << numPatterns << " distinct site patterns. T(X) = " << finalResult << std::endl; + + test_statistic_ = finalResult; +} + + +long double MultinomialSeqStat::get_test_statistic () const { + return test_statistic_; +} diff --git a/src/sstat.h b/src/sstat.h new file mode 100644 index 0000000..765f4a8 --- /dev/null +++ b/src/sstat.h @@ -0,0 +1,30 @@ +#ifndef PX_SSTAT_H +#define PX_SSTAT_H + +#include +#include + +#include "sequence.h" + + +class MultinomialSeqStat { +private: + unsigned long num_char_; + unsigned long num_taxa_; + long double test_statistic_; + + std::vector seqs_; + std::vector< std::pair > patterns_and_counts_; + + bool checked_aligned (); + void collect_site_patters (); + void calculateTestStatistic (); + +public: + explicit MultinomialSeqStat (std::vector& seqs); + long double get_test_statistic () const; + + //~MultinomialSeqStat(); +}; + +#endif /* PX_SSTAT_H */ diff --git a/src/state_reconstructor.cpp b/src/state_reconstructor.cpp new file mode 100644 index 0000000..8a51e75 --- /dev/null +++ b/src/state_reconstructor.cpp @@ -0,0 +1,684 @@ +#include +#include +#include + +#include "state_reconstructor.h" +#include "tree.h" +#include "rate_model.h" +#include "node.h" +#include "utils.h" +#include "vector_node_object.h" +#include "sequence.h" +#include "superdouble.h" + +#define verbose true + +#define MINBL 0.000000001 + + +StateReconstructor::StateReconstructor (RateModel& _rm, std::vector& _vrm):tree(nullptr), + use_periods(false), nstates(_rm.nstates), rm(_rm), rm_periods(_vrm), + dc("dist_conditionals"), andc("anc_dist_conditionals"), store_p_matrices(false), + use_stored_matrices(false), revB("revB"), rev(false), + rev_exp_number("rev_exp_number"), rev_exp_time("rev_exp_time"), + stochastic(false), stored_EN_matrices(std::map()), + stored_ER_matrices(std::map()), sp_alphas("sp_alphas"), + alphas("alphas") { + +} + + +/** + * need to do this before you do the set tree +*/ +void StateReconstructor::set_periods (std::vector& ps, + std::vector& rms) { + use_periods = true; + periods = ps; + rm_periods = rms; +} + + +/* + * initialize each node with segments +*/ +void StateReconstructor::set_tree (Tree * tr) { + tree = tr; + if (verbose) { + std::cout << "initializing nodes..." << std::endl; + } + for (unsigned int i = 0; i < tree->getNodeCount(); i++) { + if (tree->getNode(i)->getBL()getNode(i)->setBL(MINBL * 100); + } + if (use_periods) { + tree->getNode(i)->initSegVector(); + } + VectorNodeObject * dcs = new VectorNodeObject(nstates); + tree->getNode(i)->assocObject(dc,*dcs); + delete dcs; + } + /* + * initialize the actual branch segments for each node + */ + if (use_periods) { + std::cout << "initializing branch segments..." << std::endl; + tree->setHeightFromTipToNodes(); + for (unsigned int i = 0; i < tree->getNodeCount(); i++) { + if (tree->getNode(i)->hasParent()) { + std::vector pers(periods); + double anc = tree->getNode(i)->getParent()->getHeight(); + double des = tree->getNode(i)->getHeight(); + double t = des; + if (!pers.empty()) { + for (unsigned int j = 0; j < pers.size(); j++) { + double s = 0; + if (pers.size() == 1) + s = pers[0]; + for (unsigned int k = 0; k < j+1; k++) { + s += pers[k]; + } + if (t < s) { + double duration = std::min(s-t, anc-t); + if (duration > 0) { + BranchSegment tseg = BranchSegment(duration, j); + tree->getNode(i)->getSegVector()->push_back(tseg); + } + t += duration; // TODO: make sure that this is all working + } + if (t > anc || pers[j] > t) { + break; + } + } + } else { + BranchSegment tseg = BranchSegment(tree->getNode(i)->getBL(), 0); + tree->getNode(i)->getSegVector()->push_back(tseg); + } + } + } + } +} + + +/** + * this will setup the distconds and ancdistconds for each segment +*/ +void StateReconstructor::set_periods_model () { + for (unsigned int i = 0; i < tree->getNodeCount(); i++) { + std::vector * tsegs = tree->getNode(i)->getSegVector(); + for (unsigned int j = 0; j < tsegs->size(); j++) { + tsegs->at(j).setModel(&rm_periods[tsegs->at(j).getPeriod()]); + std::vector * distconds = new std::vector (nstates, 0); + tsegs->at(j).distconds = distconds; + std::vector * ancdistconds = new std::vector (nstates, 0); + tsegs->at(j).ancdistconds = ancdistconds; + } + } + std::vector * distconds = new std::vector (nstates, 0); + tree->getRoot()->assocDoubleVector(dc,*distconds); + delete distconds; + std::vector * ancdistconds = new std::vector (nstates, 0); + tree->getRoot()->assocDoubleVector(andc, *ancdistconds); + delete ancdistconds; +} + + +bool StateReconstructor::set_tip_conditionals (std::vector& data) { + bool allsame = true; + std::string testsame = data[0].get_sequence(); + for (unsigned int i = 0; i < data.size(); i++) { + Sequence seq = data[i]; + Node * nd = tree->getExternalNode(seq.get_id()); + if (verbose) { + std::cout << nd->getName() << " "; + } + if (!use_periods) { + for (int j = 0; j < nstates; j++) { + if (seq.get_sequence().at(j) == '1') { + static_cast*>(nd->getObject(dc))->at(j) = 1.0; + } else { + static_cast*>(nd->getObject(dc))->at(j) = 0.0; + } + if (verbose) { + std::cout << seq.get_sequence().at(j); + } + } + } else { + std::vector * tsegs = nd->getSegVector(); + for (int j = 0; j < nstates; j++) { + if (seq.get_sequence().at(j) == '1') { + tsegs->at(0).distconds->at(j) = 1.0; + } else { + tsegs->at(0).distconds->at(j) = 0.0; + } + if (verbose) { + std::cout << seq.get_sequence().at(j); + } + } + } + if (verbose) { + std::cout << std::endl; + } + if (testsame != seq.get_sequence()) { + allsame = false; + } + } + if (allsame && verbose) { + std::cerr << "all the tips have the same characters" << std::endl; + } + return allsame; +} + + +bool StateReconstructor::set_tip_conditionals_already_given (std::vector& data) { + bool allsame = false; + for (unsigned int i = 0; i < data.size(); i++) { + Sequence seq = data[i]; + Node * nd = tree->getExternalNode(seq.get_id()); + std::vector searchtokens; + tokenize(seq.get_sequence(), searchtokens, ","); + for (unsigned int j = 0; j < searchtokens.size(); j++) { + trim_spaces(searchtokens[j]); + } + if (verbose) { + std::cout << nd->getName() << " "; + } + if (!use_periods) { + for (int j = 0; j < nstates; j++) { + static_cast*>(nd->getObject(dc))->at(j) = std::atof(searchtokens[j].c_str()); + if (verbose) { + std::cout << searchtokens[j]; + } + } + } else { + std::vector * tsegs = nd->getSegVector(); + for (int j = 0; j < nstates; j++) { + tsegs->at(0).distconds->at(j) = std::atof(searchtokens[j].c_str()); + if (verbose) { + std::cout << searchtokens[j]; + } + } + } + if (verbose) { + std::cout << std::endl; + } + } + return allsame; +} + + +VectorNodeObject StateReconstructor::conditionals (Node& node) { + VectorNodeObject distconds = *static_cast*>(node.getObject(dc)); + VectorNodeObject * v = new VectorNodeObject (nstates, 0); + cx_mat p; + if (!use_stored_matrices) { + p= rm.setup_P(node.getBL(), store_p_matrices); + } else { + p = rm.stored_p_matrices[node.getBL()]; + } + for (int j = 0; j < nstates; j++) { + for (int k = 0; k < nstates; k++) { + v->at(j) += (distconds.at(k)*real(p(j, k))); + } + } + for (unsigned int j = 0; j < distconds.size(); j++) { + distconds[j] = v->at(j); + } + if (store_p_matrices) { + node.assocObject(sp_alphas, distconds); + node.assocObject(alphas, distconds); + } + delete v; + return distconds; +} + + +VectorNodeObject StateReconstructor::conditionals_periods (Node& node) { + std::vector distconds; + std::vector * tsegs = node.getSegVector(); + distconds = *tsegs->at(0).distconds; + for (unsigned int i = 0; i < tsegs->size(); i++) { + for (unsigned int j = 0; j < distconds.size(); j++) { + tsegs->at(i).distconds->at(j) = distconds.at(j); + } + RateModel * trm = tsegs->at(i).getModel(); + std::vector * v = new std::vector (nstates, 0); + //vector > p; + cx_mat p; + if (!use_stored_matrices) { + //p= trm->setup_fortran_P(tsegs->at(i).getPeriod(), tsegs->at(i).getDuration(), store_p_matrices); + p = trm->setup_P(tsegs->at(i).getDuration(), store_p_matrices); + } else { + //p = trm->stored_p_matrices[tsegs->at(i).getPeriod()][tsegs->at(i).getDuration()]; + p = trm->stored_p_matrices[tsegs->at(i).getDuration()]; + } + for (int j = 0; j < nstates; j++) { + for (int k = 0; k < nstates; k++) { + v->at(j) += (distconds.at(k)*real(p(j, k))); + } + } + + for (int j = 0; j < nstates; j++) { + distconds[j] = v->at(j); + } + if (store_p_matrices) { + tsegs->at(i).seg_sp_alphas = distconds; + } + delete v; + } + /* + * if store is true we want to store the conditionals for each node + * for possible use in ancestral state reconstruction + */ + if (store_p_matrices) { + tsegs->at(0).alphas = distconds; + } + VectorNodeObject rdistconds(distconds.size()); + for (unsigned int i = 0; i < distconds.size(); i++) { + rdistconds[i] = distconds[i]; + } + return rdistconds; +} + + +void StateReconstructor::ancdist_conditional_lh (Node& node) { + VectorNodeObject distconds(nstates, 0); + if (!node.isExternal()) { // is not a tip + Node * c1 = node.getChild(0); + Node * c2 = node.getChild(1); + ancdist_conditional_lh(*c1); + ancdist_conditional_lh(*c2); + VectorNodeObject v1; + VectorNodeObject v2; + if (!use_periods) { + v1 =conditionals(*c1); + v2 =conditionals(*c2); + } else { + v1 = conditionals_periods(*c1); + v2 = conditionals_periods(*c2); + } + for (int i = 0; i < nstates; i++) { + distconds.at(i)= v1[i] * v2[i]; + } + //if (node.isRoot()) { + //with equal freq! + // for (int i = 0; i < nstates; i++) { + // distconds.at(i) = distconds.at(i) * (1./nstates); + // } + //} + } else { + if (!use_periods) { + distconds = *static_cast*>(node.getObject(dc)); + } else { + std::vector * tsegs = node.getSegVector(); + //distconds = *tsegs->at(0).distconds; + for (unsigned int i = 0; i < distconds.size(); i++) { + distconds[i] = tsegs->at(0).distconds->at(i); + } + } + } + if (!use_periods) { + for (unsigned int i = 0; i < distconds.size(); i++) { + static_cast*>(node.getObject(dc))->at(i) = distconds.at(i); + } + } else { + if (node.hasParent()) { + std::vector * tsegs = node.getSegVector(); + for (unsigned int i = 0; i < distconds.size(); i++) { + tsegs->at(0).distconds->at(i) = distconds.at(i); + } + } else { + for (unsigned int i = 0; i < distconds.size(); i++) { + static_cast*>(node.getObject(dc))->at(i) = distconds.at(i); + } + } + } +} + + +double StateReconstructor::eval_likelihood () { + ancdist_conditional_lh(*tree->getRoot()); + //return (-log(calculate_vector_double_sum(* + // (VectorNodeObject*) tree->getRoot()->getObject(dc)))); + double res = -(calculate_vector_Superdouble_sum( + *static_cast*>(tree->getRoot()->getObject(dc))).getLn()); + return res; +} + + +void StateReconstructor::prepare_ancstate_reverse () { + reverse(tree->getRoot()); +} + + +void StateReconstructor::reverse (Node * node) { + rev = true; + // need to delete this at some point + VectorNodeObject * revconds = new VectorNodeObject (nstates, 0); + if (node == tree->getRoot()) { + for (int i = 0; i < nstates; i++) { + revconds->at(i) = 1.0; // prior + } + node->assocObject(revB,*revconds); + delete revconds; + for (unsigned int i = 0; i < node->getChildCount(); i++) { + reverse(node->getChild(i)); + } + } else { + //else if (!node.isExternal()) { + // calculate A i + // sum over all alpha k of sister node of the parent times the priors of the speciations + // (weights) times B of parent j + VectorNodeObject * parrev; + parrev = static_cast*>(node->getParent()->getObject(revB)); + VectorNodeObject sisdistconds; + VectorNodeObject* talph; + if (node->getParent()->getChild(0) != node) { + talph = static_cast*>(node->getParent()->getChild(0)->getObject(alphas)); + sisdistconds = *talph; + } else { + talph = static_cast*>(node->getParent()->getChild(1)->getObject(alphas)); + sisdistconds = *talph; + } + + VectorNodeObject tempA(nstates, 0); + // needs to be the same as ancdist_cond_lh + for (int i = 0; i < nstates; i++) { + //root has i, curnode has left, sister of cur has right + //for (int j = 0; j < nstates; j++) { + tempA[i] += (sisdistconds.at(i)*parrev->at(i)); + //} + } + // now calculate node B + //VectorNodeObject* tsegs = ((VectorNodeObject*) node.getObject(seg)); + for (int j = 0; j < nstates; j++) { + revconds->at(j) = 0; + } + //RateModel * rm = tsegs->at(ts).getModel(); + cx_mat * p = &rm.stored_p_matrices[node->getBL()]; + mat * EN = nullptr; + mat * ER = nullptr; + VectorNodeObject tempmoveAer(tempA); + VectorNodeObject tempmoveAen(tempA); + if (stochastic) { + // initialize the segment B's + for (int j = 0; j < nstates; j++) { + tempmoveAer[j] = 0; + tempmoveAen[j] = 0; + } + EN = &stored_EN_matrices[node->getBL()]; + ER = &stored_ER_matrices[node->getBL()]; + } + for (int j = 0; j < nstates; j++) { + for (int i = 0; i < nstates; i++) { + revconds->at(j) += tempA[i]*real((*p)(i, j)); // tempA needs to change each time + if (stochastic) { + tempmoveAer[j] += tempA[i]*(((*ER)(i, j))); + tempmoveAen[j] += tempA[i]*(((*EN)(i, j))); + } + } + } + for (int j = 0; j < nstates; j++) { + tempA[j] = revconds->at(j); + } + if (stochastic) { + node->seg_sp_stoch_map_revB_time = tempmoveAer; + node->seg_sp_stoch_map_revB_number = tempmoveAen; + } + node->assocObject(revB,*revconds); // leak + delete revconds; + for (unsigned int i = 0; i < node->getChildCount(); i++) { + reverse(node->getChild(i)); + } + } +} + + +std::vector StateReconstructor::calculate_ancstate_reverse_sd (Node& node) { + std::vector LHOODS(nstates, 0); + if (!node.isExternal()) { // is not a tip + VectorNodeObject * Bs = static_cast*>(node.getObject(revB)); + Node * c1 = node.getChild(0); + Node * c2 = node.getChild(1); + VectorNodeObject* v1 = static_cast*>(c1->getObject(alphas)); + VectorNodeObject* v2 = static_cast*>(c2->getObject(alphas)); + + for (int i = 0; i < nstates; i++) { + //for (int j = 0; j < nstates; j++) { + // LHOODS[i] += (v1->at(i)*v2->at(j)); //*weight); + //} + LHOODS[i] = ((v1->at(i)*v2->at(i)) * Bs->at(i)); + } + } + return LHOODS; +} + + +std::vector StateReconstructor::calculate_ancstate_reverse (Node& node) { + std::vector LHOODS(nstates, 0); + if (!node.isExternal()) { // is not a tip + VectorNodeObject * Bs = static_cast*>(node.getObject(revB)); + Node * c1 = node.getChild(0); + Node * c2 = node.getChild(1); + VectorNodeObject* v1 = static_cast*>(c1->getObject(alphas)); + VectorNodeObject* v2 = static_cast*>(c2->getObject(alphas)); + + for (int i = 0; i < nstates; i++) { + //for (int j = 0; j < nstates; j++) { + // LHOODS[i] += (v1->at(i)*v2->at(j)); //*weight); + //} + LHOODS[i] = double((v1->at(i)*v2->at(i)) * Bs->at(i)); + } + } + return LHOODS; +} + + +void StateReconstructor::prepare_stochmap_reverse_all_nodes (int from, int to) { + stochastic = true; + // calculate and store local expectation matrix for each branch length + for (unsigned int k = 0; k < tree->getNodeCount(); k++) { + double dur = tree->getNode(k)->getBL(); + cx_mat eigvec(nstates, nstates); + eigvec.fill(0); + cx_mat eigval(nstates, nstates); + eigval.fill(0); + bool isImag = rm.get_eigenvec_eigenval_from_Q(&eigval, &eigvec); + mat Ql(nstates, nstates); + Ql.fill(0); + Ql(from, to) = rm.get_Q()(from, to); + mat W(nstates, nstates); + W.fill(0); + W(from, from) = 1; + cx_mat summed(nstates, nstates); + summed.fill(0); + cx_mat summedR(nstates, nstates); + summedR.fill(0); + for (int i = 0; i < nstates; i++) { + mat Ei(nstates, nstates); + Ei.fill(0); + Ei(i, i) = 1; + cx_mat Si(nstates, nstates); + Si = eigvec * Ei * inv(eigvec); + for (int j = 0; j < nstates; j++) { + cx_double dij = (eigval(i, i)-eigval(j, j)) * dur; + mat Ej(nstates, nstates); + Ej.fill(0); + Ej(j, j) = 1; + cx_mat Sj(nstates, nstates); + Sj = eigvec * Ej * inv(eigvec); + cx_double Iijt = 0; + if (abs(dij) > 10) { + Iijt = (exp(eigval(i, i)*dur)-exp(eigval(j, j)*dur))/(eigval(i, i)-eigval(j, j)); + } else if (abs(dij) < 10e-20) { + Iijt = dur*exp(eigval(j, j)*dur)*(1.+dij/2.+pow(dij, 2.)/6.+pow(dij, 3.)/24.); + } else { + if (eigval(i, i) == eigval(j, j)) { + //WAS Iijt = dur*exp(eigval(j, j)*dur)*expm1(dij)/dij; + if (isImag) { + Iijt = dur*exp(eigval(j, j)*dur)*(exp(dij)-1.)/dij; + } else { + Iijt = dur*exp(eigval(j, j)*dur)*(expm1(real(dij)))/dij; + } + } else { + //WAS Iijt = -dur*exp(eigval(i, i)*dur)*expm1(-dij)/dij; + if (isImag) { + Iijt = -dur*exp(eigval(i, i)*dur)*(exp(-dij)-1.)/dij; + } else { + Iijt = -dur*exp(eigval(i, i)*dur)*(expm1(real(-dij)))/dij; + } + } + } + summed += (Si * Ql * Sj * Iijt); + summedR += (Si * W * Sj * Iijt); + } + } + //std::cout << isImag << std::endl; + //std::cout << summed << std::endl; + // seems like when these are IMAG, there can sometimes be negative with very small values + stored_EN_matrices[dur] = abs(real(summed)); //(real(summed)); + stored_ER_matrices[dur] = abs(real(summedR)); //(real(summedR)); + } +} + + +/* + * only for number of changes +*/ +void StateReconstructor::prepare_stochmap_reverse_all_nodes_all_matrices () { + stochastic = true; + // calculate and store local expectation matrix for each branch length + for (unsigned int k = 0; k < tree->getNodeCount(); k++) { + double dur = tree->getNode(k)->getBL(); + cx_mat eigvec(nstates, nstates); + eigvec.fill(0); + cx_mat eigval(nstates, nstates); + eigval.fill(0); + bool isImag = rm.get_eigenvec_eigenval_from_Q(&eigval, &eigvec); + mat Ql(nstates, nstates); + Ql.fill(0); + for (unsigned int i = 0; i < Ql.n_rows; i++) { + for (unsigned int j = 0; j < Ql.n_cols; j++) { + if (i != j) { + Ql(i, j) = rm.get_Q()(i, j); + } + } + } + mat W(nstates, nstates); + W.fill(0); + W(1, 1) = 1; + cx_mat summed(nstates, nstates); + summed.fill(0); + cx_mat summedR(nstates, nstates); + summedR.fill(0); + for (int i = 0; i < nstates; i++) { + mat Ei(nstates, nstates); + Ei.fill(0); + Ei(i, i) = 1; + cx_mat Si(nstates, nstates); + Si = eigvec * Ei * inv(eigvec); + for (int j = 0; j < nstates; j++) { + cx_double dij = (eigval(i, i)-eigval(j, j)) * dur; + mat Ej(nstates, nstates); + Ej.fill(0); + Ej(j, j) = 1; + cx_mat Sj(nstates, nstates); + Sj = eigvec * Ej * inv(eigvec); + cx_double Iijt = 0; + if (abs(dij) > 10) { + Iijt = (exp(eigval(i, i)*dur)-exp(eigval(j, j)*dur))/(eigval(i, i)-eigval(j, j)); + } else if (abs(dij) < 10e-20) { + Iijt = dur*exp(eigval(j, j)*dur)*(1.+dij/2.+pow(dij, 2.)/6.+pow(dij, 3.)/24.); + } else { + if (eigval(i, i) == eigval(j, j)) { + //WAS Iijt = dur*exp(eigval(j, j)*dur)*expm1(dij)/dij; + if (isImag) { + Iijt = dur*exp(eigval(j, j)*dur)*(exp(dij)-1.)/dij; + } else { + Iijt = dur*exp(eigval(j, j)*dur)*(expm1(real(dij)))/dij; + } + } else { + //WAS Iijt = -dur*exp(eigval(i, i)*dur)*expm1(-dij)/dij; + if (isImag) { + Iijt = -dur*exp(eigval(i, i)*dur)*(exp(-dij)-1.)/dij; + } else { + Iijt = -dur*exp(eigval(i, i)*dur)*(expm1(real(-dij)))/dij; + } + } + } + summed += (Si * Ql * Sj * Iijt); + summedR += (Si * W * Sj * Iijt); + } + } + //std::cout << isImag << std::endl; + //std::cout << summed << std::endl; + // seems like when these are IMAG, there can sometimes be negative with very small values + stored_EN_matrices[dur] = abs(real(summed)); // (real(summed)); + stored_ER_matrices[dur] = abs(real(summedR)); // (real(summedR)); + } +} + + +std::vector StateReconstructor::calculate_reverse_stochmap (Node& node, + bool tm) { + if (node.isExternal() == false) { // is not a tip + std::vector totalExp(nstates, 0); + std::vector Bs; + if (tm) { + Bs = node.seg_sp_stoch_map_revB_time; + } else { + Bs = node.seg_sp_stoch_map_revB_number; + } + Node * c1 = node.getChild(0); + Node * c2 = node.getChild(1); + VectorNodeObject * v1 = static_cast*>(c1->getObject(alphas)); + VectorNodeObject * v2 = static_cast*>(c2->getObject(alphas)); + VectorNodeObject LHOODS(nstates, 0); + for (int i = 0; i < nstates; i++) { + //for (int j = 0; j < nstates; j++) { + //int ind1 = leftdists[j]; + //int ind2 = rightdists[j]; + //LHOODS[i] += (v1.at(ind1)*v2.at(ind2)*weight); + //} + LHOODS[i] = double(v1->at(i) * v2->at(i) * Bs.at(i)); + //std::cout << v1->at(i) << " " << v2->at(i)<< " " << Bs.at(i) << std::endl; + } + for (int i = 0; i < nstates; i++) { + totalExp[i] = LHOODS[i]; + } + // not sure if this should return a Superdouble or not when doing a bigtree + return totalExp; + } else { // hmm don't really need this else + std::vector totalExp(nstates, 0); + std::vector Bs; + if (tm) { + Bs = node.seg_sp_stoch_map_revB_time; + } else { + Bs = node.seg_sp_stoch_map_revB_number; + } + VectorNodeObject LHOODS(nstates, 0); + VectorNodeObject* distconds = static_cast*>(node.getObject(dc)); + for (int i = 0; i < nstates; i++) { + LHOODS[i] = double(Bs.at(i) * (distconds->at(i) )); + } + for (int i = 0; i < nstates; i++) { + totalExp[i] = LHOODS[i]; + } + return totalExp; + } +} + + +void StateReconstructor::set_store_p_matrices (bool i) { + store_p_matrices = i; +} + + +void StateReconstructor::set_use_stored_matrices (bool i) { + use_stored_matrices = i; +} + + +StateReconstructor::~StateReconstructor () { + +} diff --git a/src/state_reconstructor.h b/src/state_reconstructor.h new file mode 100644 index 0000000..55ad551 --- /dev/null +++ b/src/state_reconstructor.h @@ -0,0 +1,71 @@ +#ifndef PX_STATE_RECONSTRUCTOR_H +#define PX_STATE_RECONSTRUCTOR_H + +#include +#include +#include + +#include "rate_model.h" +#include "superdouble.h" +#include "vector_node_object.h" + +class Sequence; // forward declaration +class Node; // forward declaration +class Tree; // forward declaration + + +class StateReconstructor { +private: + Tree * tree; + std::vector periods; + bool use_periods; + + int nstates; + RateModel& rm; + std::vector& rm_periods; + std::string dc; + std::string andc; + bool store_p_matrices; + bool use_stored_matrices; + + //reverse bits + std::string revB; + bool rev; + //end reverse bits + + //stochastic mapping bits + std::string rev_exp_number; + std::string rev_exp_time; + bool stochastic; + //map of period int and then branch length double + std::map stored_EN_matrices; + std::map stored_ER_matrices; + //end mapping bits + std::string sp_alphas; + std::string alphas; + + VectorNodeObject conditionals (Node& node); + VectorNodeObject conditionals_periods (Node& node); + void ancdist_conditional_lh (Node& node); + +public: + StateReconstructor (RateModel&, std::vector& _vrm); + void set_periods (std::vector& ps, std::vector& rms); + void set_tree (Tree *); + double eval_likelihood (); + void set_periods_model (); + bool set_tip_conditionals (std::vector& distrib_data); + bool set_tip_conditionals_already_given (std::vector& distrib_data); + void prepare_ancstate_reverse (); + void reverse (Node *); + std::vector calculate_ancstate_reverse_sd (Node& node); + std::vector calculate_ancstate_reverse (Node& node); + void prepare_stochmap_reverse_all_nodes (int, int); + void prepare_stochmap_reverse_all_nodes_all_matrices (); + std::vector calculate_reverse_stochmap (Node&, bool); + void set_store_p_matrices (bool i); + void set_use_stored_matrices (bool i); + ~StateReconstructor (); +}; + +#endif /* PX_STATE_RECONSTRUCTOR_H */ diff --git a/src/string_node_object.h b/src/string_node_object.h new file mode 100644 index 0000000..bdf65e3 --- /dev/null +++ b/src/string_node_object.h @@ -0,0 +1,25 @@ +/* + * node_object.h + * + * Created on: Nov 24, 2009 + * Author: smitty + */ + +#ifndef PX_STRING_NODE_OBJECT_H +#define PX_STRING_NODE_OBJECT_H + +#include + +#include "node_object.h" + +class StringNodeObject: public std::string, public NodeObject { +public: + explicit StringNodeObject(const char * value): std::string(value) {} + explicit StringNodeObject(const std::string& value): std::string(value) {} + virtual ~StringNodeObject() {} + +public: + StringNodeObject * clone() const { return new StringNodeObject(*this); } +}; + +#endif /* PX_STRING_NODE_OBJECT_H */ diff --git a/src/superdouble.cpp b/src/superdouble.cpp new file mode 100644 index 0000000..f921095 --- /dev/null +++ b/src/superdouble.cpp @@ -0,0 +1,269 @@ +#include +#include + +#include "superdouble.h" +#include "utils.h" + +Superdouble::Superdouble (long double m, int e):stilldouble(false), upperlimit(1e+100), + lowerlimit(1e-100) { + mantissa = m; + exponent = e; + if (exponent == 0) { + stilldouble = true; + } else { + adjustDecimal(); + } +} + + +Superdouble::~Superdouble () = default; + + +// not used +int Superdouble::getExponent () const { + return exponent; +} + + +// not used +double Superdouble::getMantissa () { + return static_cast(mantissa); +} + + +void Superdouble::adjustDecimal () { + stilldouble = false; + if (!std::isnormal(mantissa)) { + exponent = 0; + stilldouble = true; + } else { + while (std::abs(mantissa) >= 10) { + mantissa *= 0.1; + exponent += 1; + } + while (std::abs(mantissa) < 1) { + mantissa *= 10.0; + exponent += -1; + } + } +} + + +// not used +std::ostream& operator << (std::ostream& os, const Superdouble& x) { + os << x.mantissa << "e" << x.exponent; + return os; +} + + +Superdouble Superdouble::operator * (Superdouble x) { + Superdouble result(mantissa * x.mantissa, exponent + x.exponent); + if (result.stilldouble) { + if (std::abs(result.mantissa) > upperlimit || std::abs(result.mantissa) < lowerlimit) { + result.adjustDecimal(); + } + } else { + result.adjustDecimal(); + } + return result; +} + + +Superdouble Superdouble::operator * (double x) { + Superdouble result(mantissa * x, exponent); + if (result.stilldouble) { + if (std::abs(result.mantissa) > upperlimit || std::abs(result.mantissa) < lowerlimit) { + result.adjustDecimal(); + } + } else { + result.adjustDecimal(); + } + return result; +} + + + +// add stilldouble +Superdouble Superdouble::operator / (Superdouble x) { + Superdouble result(mantissa/x.mantissa, exponent - x.exponent); + result.adjustDecimal(); + return result; +} + + +// add stilldouble +Superdouble Superdouble::operator + (Superdouble x) { + // only tricky thing is converting them to same exponent + if (!essentially_equal(mantissa, 0.0L)) { + int exponentdif = x.exponent-exponent; + Superdouble result(mantissa + (x.mantissa * (pow(10, exponentdif))), exponent); + result.adjustDecimal(); + return result; + } + Superdouble result(x.mantissa, x.exponent); + result.adjustDecimal(); + return result; +} + + +// add stilldouble +Superdouble Superdouble::operator - (Superdouble x) { + // only tricky thing is converting them to same exponent + if (!essentially_equal(mantissa, 0.0L)) { + int exponentdif = x.exponent - exponent; + Superdouble result(mantissa - (x.mantissa * (pow(10, exponentdif))), exponent); + result.adjustDecimal(); + return result; + } + Superdouble result(-1.0 * x.mantissa, x.exponent); + result.adjustDecimal(); + return result; +} + + +// add stilldouble +void Superdouble::operator ++ () { + mantissa++; + adjustDecimal(); +} + + +// add stilldouble +void Superdouble::operator -- () { + mantissa--; + adjustDecimal(); +} + + +// add stilldouble +void Superdouble::operator *= (Superdouble x) { + mantissa *= x.mantissa; + exponent += x.exponent; + adjustDecimal(); +} + + +// add stilldouble +void Superdouble::operator /= (Superdouble x) { + mantissa /= x.mantissa; + exponent -= x.exponent; + adjustDecimal(); +} + + +void Superdouble::operator += (Superdouble x) { + // only tricky thing is converting them to same exponent + if (!essentially_equal(mantissa, 0.0L)) { + if (stilldouble && x.stilldouble) { + mantissa += x.mantissa; + if (std::abs(mantissa) > upperlimit || std::abs(mantissa) < lowerlimit) { + adjustDecimal(); + } + } else { + int exponentdif=x.exponent-exponent; + mantissa=mantissa+(x.mantissa*(pow(10, exponentdif))); + adjustDecimal(); + } + } else { + if (stilldouble && x.stilldouble) { + mantissa = x.mantissa; + exponent = x.exponent; + } else { + mantissa = x.mantissa; + exponent = x.exponent; + adjustDecimal(); + } + } +} + + +// add stilldouble +void Superdouble::operator -= (Superdouble x) { + // only tricky thing is converting them to same exponent + if (!essentially_equal(mantissa, 0.0L)) { + int exponentdif = x.exponent-exponent; + mantissa = mantissa - (x.mantissa*(pow(10, exponentdif))); + adjustDecimal(); + } else { + mantissa = -1.0 * x.mantissa; + exponent = x.exponent; + adjustDecimal(); + } +} + + +bool Superdouble::operator > (const Superdouble& x)const { + bool res = false; + if (exponent > x.exponent) { + res = true; + } else if (exponent == x.exponent && mantissa > x.mantissa) { + res = true; + } + return res; +} + + +bool Superdouble::operator >= (const Superdouble& x)const { + bool res = false; + if (exponent > x.exponent) { + res = true; + } else if (exponent == x.exponent && mantissa >= x.mantissa) { + res = true; + } + return res; +} + + +bool Superdouble::operator < (const Superdouble& x)const { + bool res = false; + if (exponent < x.exponent) { + res = true; + } else if (exponent == x.exponent && mantissa < x.mantissa) { + res = true; + } + return res; +} + + +bool Superdouble::operator <= (const Superdouble& x)const { + bool res = false; + if (exponent < x.exponent) { + res = true; + } else if (exponent == x.exponent && mantissa <= x.mantissa) { + res = true; + } + return res; +} + + +// this just switches the sign of the superdouble. not used +void Superdouble::switch_sign () { + mantissa = -1 * mantissa; +} + + +/*bool Superdouble::operator > (double x) { + if (double() > x) { + return true; + } else { + return false; + } +}*/ + + +Superdouble Superdouble::getLn () { + //ln(a * 10^b) = ln(a) + ln(10^b) = ln(a) + log10 (10^b) / log10 (e^1) = ln(a) + b/log10(e^1) + Superdouble result(log(mantissa)+(1.0*(exponent))/log10(exp(1)), 0); + result.adjustDecimal(); + return result; +} + + +Superdouble Superdouble::abs () { + if (mantissa < 0) { + Superdouble result(-mantissa, exponent); + return result; + } + Superdouble result(mantissa, exponent); + return result; +} diff --git a/src/superdouble.h b/src/superdouble.h new file mode 100644 index 0000000..13cdefa --- /dev/null +++ b/src/superdouble.h @@ -0,0 +1,71 @@ +/* + * superdouble, a class with long double precision but less subject to overflow or underflow + * superdouble X=mantissa * 10^exponent + * + * Copyright Brian C. O'Meara, Oct. 2, 2008 + * http://www.brianomeara.info + * + * Additional developers wanted!!! + * + This program is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License + along with this program. If not, see . + + more development by Stephen A. Smith + modernizing by Joseph W. Brown (2021) + */ + +#ifndef PX_SUPERDOUBLE_H +#define PX_SUPERDOUBLE_H + +#include +#include + +class Superdouble { +private: + long double mantissa; + int exponent; + bool stilldouble; + double upperlimit; + double lowerlimit; + void adjustDecimal (); + friend std::ostream& operator << (std::ostream& os, const Superdouble& x); + +public: + Superdouble(long double m=1.0l, int e=0); + ~Superdouble(); + Superdouble operator* ( Superdouble x); + Superdouble operator* ( double x); + Superdouble operator/ ( Superdouble x); + Superdouble operator+ ( Superdouble x); + Superdouble operator- ( Superdouble x); + void operator++ (); + void operator -- (); + void operator*= (Superdouble x); + void operator/= (Superdouble x); + void operator+= (Superdouble x); + void operator-= (Superdouble x); + bool operator < (const Superdouble& x) const; + bool operator > (const Superdouble& x) const; + bool operator >= (const Superdouble& x) const; + bool operator <= (const Superdouble& x) const; + int getExponent () const; + double getMantissa (); + Superdouble getLn (); + Superdouble abs (); + void switch_sign (); + + operator double() { + return static_cast (mantissa) * pow(10., exponent); + } +}; +#endif /* PX_SUPERDOUBLE_H */ diff --git a/src/tgen.cpp b/src/tgen.cpp new file mode 100644 index 0000000..378b5a2 --- /dev/null +++ b/src/tgen.cpp @@ -0,0 +1,229 @@ +#include +#include +#include +#include +//#include +//#include +#include + +#include "utils.h" +#include "tgen.h" +#include "tree_utils.h" + + +TopologyGenerator::TopologyGenerator(const unsigned int& num_taxa, const bool& rooted, + std::string& lprefix):num_taxa_(num_taxa), rooted_(rooted), lprefix_(std::move(lprefix)), + ntopos_(0), nedges_(0), curtax_(0), curnode_(0) { + initialize(); +} + + +// generate starting star tree (edge matrix), set starting taxon and node +void TopologyGenerator::initialize () { + std::vector< std::vector > init_edges_; + ntopos_ = get_num_possible_trees(num_taxa_, rooted_); + nedges_ = get_num_edges(); + if (!rooted_) { + init_edges_ = initialize_edge_matrix_unrooted(); + curtax_ = 4u; + } else { + init_edges_ = initialize_edge_matrix_rooted(); + curtax_ = 3u; + } + curnode_ = init_edges_[0][0] + 1; // increment largest initialized node + trees_.push_back(init_edges_); +} + + +// the number of edges in the final trees +// 2n-3 for unrooted, 2n-2 for rooted +unsigned int TopologyGenerator::get_num_edges () { + unsigned int nedges = 2 * num_taxa_ - 3 + static_cast(rooted_); + return nedges; +} + + +// trees are stored as edge matrices - avoids overhead of node objects +// 2 columns: ancestor node index, descendant node index +// 2n-3 rows (edges) +// first 3 edges are initialized (i.e., star tree) +std::vector< std::vector > TopologyGenerator::initialize_edge_matrix_unrooted () { + std::vector< std::vector > edges(nedges_, std::vector(2, 0)); + edges[0][0] = edges[1][0] = edges[2][0] = num_taxa_ + 1; + // initialize 3 taxon star tree + for (unsigned int i = 0; i < 3; i++) { + edges[i][1] = i + 1; + } + return edges; +} + + +// rooted version of above +// 2 columns: ancestor node index, descendant node index +// 2n-2 rows (edges) +// first 2 edges are initialized +std::vector< std::vector > TopologyGenerator::initialize_edge_matrix_rooted () { + std::vector< std::vector > edges(nedges_, std::vector(2, 0)); + edges[0][0] = edges[1][0] = num_taxa_ + 1; + // initialize 2 taxon tree + for (unsigned int i = 0; i < 2; i++) { + edges[i][1] = i + 1; + } + return edges; +} + + +// add next taxon to existing edge matrices +// for the nth taxon, there are 2(n-1)-3 possible attachment points +// - i.e., the edges of the previous iteration +std::vector< std::vector< std::vector > > TopologyGenerator::add_taxon_unrooted ( + std::vector< std::vector< std::vector > > edges, + const unsigned int& taxon, const unsigned int& new_node) { + std::vector< std::vector< std::vector > > trees; + unsigned int num_attach = 2 * (taxon - 1) - 3; // also the row where next edge will be added + std::vector< std::vector > edge; + for (const auto & j : edges) { + for (unsigned int i = 0; i < num_attach; i++) { + edge = j; + unsigned int prev_node = edge[i][0]; + edge[i][0] = new_node; // dec stays the same + // new edges + edge[num_attach][0] = new_node; + edge[num_attach][1] = taxon; // new tip + + edge[num_attach + 1][0] = prev_node; + edge[num_attach + 1][1] = new_node; + + trees.push_back(edge); + } + } + return trees; +} + + +// rooted version of above +// add next taxon to existing edge matrices +// for the nth taxon, there are 2(n-1)-2 possible attachment points +// - i.e., the edges of the previous iteration +// need to keep a copy of the first matrix for flipping in the last +std::vector< std::vector< std::vector > > TopologyGenerator::add_taxon_rooted ( + std::vector< std::vector< std::vector > > edges, + const unsigned int& taxon, const unsigned int& new_node) { + std::vector< std::vector< std::vector > > trees; + unsigned int num_attach = 2 * (taxon - 1) - 2; // also the row where next edge will be added + std::vector< std::vector > edge; + + for (const auto & j : edges) { + for (unsigned int i = 0; i < num_attach; i++) { + edge = j; + unsigned int prev_node = edge[i][0]; + edge[i][0] = new_node; // dec stays the same + // new edges + edge[num_attach][0] = new_node; + edge[num_attach][1] = taxon; // new tip + + edge[num_attach + 1][0] = prev_node; + edge[num_attach + 1][1] = new_node; + + trees.push_back(edge); + } + // now for the flipped matrix + edge = j; + // first, swap new node in for root node (always num_taxa+1) + unsigned int root = num_taxa_ + 1; + for (auto & ei : edge) { + if (ei[0] == root) { + ei[0] = new_node; + } else if (ei[0] == 0) { + // early break: if 0, then edge has yet to be generated + break; + } + } + // second, add original root back in, attching to new taxon + edge[num_attach][0] = root; + edge[num_attach][1] = taxon; + // finally, attach root above new node + edge[num_attach + 1][0] = root; + edge[num_attach + 1][1] = new_node; + // and add to the tree collection + trees.push_back(edge); + } + return trees; +} + + +void TopologyGenerator::generate_trees () { + while (curtax_ <= num_taxa_) { + //std::cout << "adding taxon: " << curtax_ << std::endl; + if (!rooted_) { + trees_ = add_taxon_unrooted(trees_, curtax_, curnode_); + } else { + trees_ = add_taxon_rooted(trees_, curtax_, curnode_); + } + curtax_++; + curnode_++; + } + //std::cout << "done." << std::endl; +} + + +std::string TopologyGenerator::edge_matrix_to_newick (const std::vector< std::vector >& edges) { + std::string tree; + //int num_edges = (int)edges.size(); + //int num_taxa = (int)((num_edges + 3)/2); + unsigned int min_node = num_taxa_ + 1; + unsigned int max_node = nedges_ + 1; + + std::map> m; + + for (unsigned int i = min_node; i <= max_node; i++) { + std::vector clade; + for (unsigned int j = 0; j < nedges_; j++) { + if (edges[j][0] == i) { + clade.push_back(edges[j][1]); + } + } + m[i] = clade; + } + newick_from_tree_map(min_node, m, tree); + tree += ";"; + return tree; +} + + +// recursive, so newick string is passed by reference +void TopologyGenerator::newick_from_tree_map (unsigned int node, + std::map> m, std::string& tree) { + tree += "("; // every entrance to this function is a tree + + std::vector decnodes = m[node]; + auto numdec = static_cast(decnodes.size()); + + for (unsigned int i = 0; i < numdec; i++) { + unsigned int curnode = decnodes[i]; + // is curnode a clade (i.e., needs to be further processed)? + // could also use number of tips if things are labelled reasonably + if (m.count(curnode) != 0u) { + newick_from_tree_map(curnode, m, tree); // recursion, baby + } else { + // terminal + tree += lprefix_ + std::to_string(curnode); + } + if (i < (numdec - 1)) { + tree += ","; + } + } + tree += ")"; +} + + +// this will send newick to poos +void TopologyGenerator::get_newicks (std::ostream* poos) { + generate_trees(); + std::vector< std::vector > tree; + for (unsigned long int i = 0; i < ntopos_; i++) { + tree = trees_[i]; + std::string newick = edge_matrix_to_newick(tree); + (*poos) << newick << std::endl; + } +} \ No newline at end of file diff --git a/src/tgen.h b/src/tgen.h new file mode 100644 index 0000000..53bce09 --- /dev/null +++ b/src/tgen.h @@ -0,0 +1,46 @@ +#ifndef PX_TGEN_H +#define PX_TGEN_H + +#include +#include +#include +#include + + +class TopologyGenerator { +private: + unsigned int num_taxa_; + bool rooted_; + std::string lprefix_; + + unsigned long int ntopos_; // number of possible topologies for n taxa. depends on rootedness + unsigned int nedges_; // the number of edges in the final trees. depends on rootedness + unsigned int curtax_; // the next taxon to add + unsigned int curnode_; // the next internal node to add + + std::vector< std::vector< std::vector > > trees_; + std::vector newicks_; // sweet, sweet results + + void initialize(); + unsigned int get_num_edges (); + std::vector< std::vector > initialize_edge_matrix_unrooted (); + std::vector< std::vector > initialize_edge_matrix_rooted (); + std::vector< std::vector< std::vector > > add_taxon_unrooted ( + std::vector< std::vector< std::vector > > edges, + const unsigned int& taxon, const unsigned int& new_node); + std::vector< std::vector< std::vector > > add_taxon_rooted ( + std::vector< std::vector< std::vector > > edges, + const unsigned int& taxon, const unsigned int& new_node); + void newick_from_tree_map (unsigned int node, std::map > m, std::string& tree); + std::string edge_matrix_to_newick (const std::vector< std::vector >& edges); + void generate_trees (); + +public: + TopologyGenerator (const unsigned int& num_taxa, const bool& rooted, + std::string& lprefix); + void get_newicks (std::ostream* poos); + //~TopologyGenerator(); +}; + +#endif /* PX_TGEN_H_ */ \ No newline at end of file diff --git a/src/timer.cpp b/src/timer.cpp new file mode 100644 index 0000000..89653c0 --- /dev/null +++ b/src/timer.cpp @@ -0,0 +1,25 @@ +#include +#include + +#include "timer.h" + +// a barebones RAII timer + + +Timer::Timer ():start_(0), end_(0), duration_(0) { + start_time_point_ = std::chrono::high_resolution_clock::now(); +} + +void Timer::compute_duration () { + end_time_point_ = std::chrono::high_resolution_clock::now(); + start_ = std::chrono::time_point_cast(start_time_point_).time_since_epoch().count(); + end_ = std::chrono::time_point_cast(end_time_point_).time_since_epoch().count(); + duration_ = end_ - start_; + double millisecs = duration_ * 0.001; + + std::cout << duration_ << " µs (" << millisecs << " ms)" << std::endl; +} + +Timer::~Timer () { + compute_duration(); +} diff --git a/src/timer.h b/src/timer.h new file mode 100644 index 0000000..ef0b9c5 --- /dev/null +++ b/src/timer.h @@ -0,0 +1,20 @@ +#ifndef PX_TIMER_H +#define PX_TIMER_H + +#include + +class Timer { +private: + std::chrono::time_point start_time_point_; + std::chrono::time_point end_time_point_; + long start_; + long end_; + long duration_; + +public: + Timer (); + void compute_duration (); + ~Timer (); +}; + +#endif /* PX_TIMER_H */ diff --git a/src/tlate.cpp b/src/tlate.cpp new file mode 100644 index 0000000..ea2b216 --- /dev/null +++ b/src/tlate.cpp @@ -0,0 +1,329 @@ +#include +#include +#include +#include + +#include "tlate.h" +#include "utils.h" +#include "sequence.h" +#include "seq_reader.h" + + +/*******************************************************/ +// hard-coded translation tables // + +// uses standard code (https://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi#SG1) +static std::map standard_ = { + {"TTT", "F"}, + {"TTC", "F"}, + {"TTA", "L"}, + {"TTG", "L"}, + {"TCT", "S"}, + {"TCC", "S"}, + {"TCA", "S"}, + {"TCG", "S"}, + {"TAT", "Y"}, + {"TAC", "Y"}, + {"TAA", "*"}, + {"TAG", "*"}, + {"TGT", "C"}, + {"TGC", "C"}, + {"TGA", "*"}, + {"TGG", "W"}, + {"CTT", "L"}, + {"CTC", "L"}, + {"CTA", "L"}, + {"CTG", "L"}, + {"CCT", "P"}, + {"CCC", "P"}, + {"CCA", "P"}, + {"CCG", "P"}, + {"CAT", "H"}, + {"CAC", "H"}, + {"CAA", "Q"}, + {"CAG", "Q"}, + {"CGT", "R"}, + {"CGC", "R"}, + {"CGA", "R"}, + {"CGG", "R"}, + {"ATT", "I"}, + {"ATC", "I"}, + {"ATA", "I"}, + {"ATG", "M"}, + {"ACT", "T"}, + {"ACC", "T"}, + {"ACA", "T"}, + {"ACG", "T"}, + {"AAT", "N"}, + {"AAC", "N"}, + {"AAA", "K"}, + {"AAG", "K"}, + {"AGT", "S"}, + {"AGC", "S"}, + {"AGA", "R"}, + {"AGG", "R"}, + {"GTT", "V"}, + {"GTC", "V"}, + {"GTA", "V"}, + {"GTG", "V"}, + {"GCT", "A"}, + {"GCC", "A"}, + {"GCA", "A"}, + {"GCG", "A"}, + {"GAT", "D"}, + {"GAC", "D"}, + {"GAA", "E"}, + {"GAG", "E"}, + {"GGT", "G"}, + {"GGC", "G"}, + {"GGA", "G"}, + {"GGG", "G"} +}; + + +// https://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi#SG2 +static std::map vert_mtdna_ = { + {"TTT", "F"}, + {"TTC", "F"}, + {"TTA", "L"}, + {"TTG", "L"}, + {"TCT", "S"}, + {"TCC", "S"}, + {"TCA", "S"}, + {"TCG", "S"}, + {"TAT", "Y"}, + {"TAC", "Y"}, + {"TAA", "*"}, + {"TAG", "*"}, + {"TGT", "C"}, + {"TGC", "C"}, + {"TGA", "W"}, + {"TGG", "W"}, + {"CTT", "L"}, + {"CTC", "L"}, + {"CTA", "L"}, + {"CTG", "L"}, + {"CCT", "P"}, + {"CCC", "P"}, + {"CCA", "P"}, + {"CCG", "P"}, + {"CAT", "H"}, + {"CAC", "H"}, + {"CAA", "Q"}, + {"CAG", "Q"}, + {"CGT", "R"}, + {"CGC", "R"}, + {"CGA", "R"}, + {"CGG", "R"}, + {"ATT", "I"}, + {"ATC", "I"}, + {"ATA", "M"}, + {"ATG", "M"}, + {"ACT", "T"}, + {"ACC", "T"}, + {"ACA", "T"}, + {"ACG", "T"}, + {"AAT", "N"}, + {"AAC", "N"}, + {"AAA", "K"}, + {"AAG", "K"}, + {"AGT", "S"}, + {"AGC", "S"}, + {"AGA", "*"}, + {"AGG", "*"}, + {"GTT", "V"}, + {"GTC", "V"}, + {"GTA", "V"}, + {"GTG", "V"}, + {"GCT", "A"}, + {"GCC", "A"}, + {"GCA", "A"}, + {"GCG", "A"}, + {"GAT", "D"}, + {"GAC", "D"}, + {"GAA", "E"}, + {"GAG", "E"}, + {"GGT", "G"}, + {"GGC", "G"}, + {"GGA", "G"}, + {"GGG", "G"} +}; + + +// https://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi#SG3 +static std::map yeast_mtdna_ = { + {"TTT", "F"}, + {"TTC", "F"}, + {"TTA", "L"}, + {"TTG", "L"}, + {"TCT", "S"}, + {"TCC", "S"}, + {"TCA", "S"}, + {"TCG", "S"}, + {"TAT", "Y"}, + {"TAC", "Y"}, + {"TAA", "*"}, + {"TAG", "*"}, + {"TGT", "C"}, + {"TGC", "C"}, + {"TGA", "W"}, + {"TGG", "W"}, + {"CTT", "T"}, + {"CTC", "T"}, + {"CTA", "T"}, + {"CTG", "T"}, + {"CCT", "P"}, + {"CCC", "P"}, + {"CCA", "P"}, + {"CCG", "P"}, + {"CAT", "H"}, + {"CAC", "H"}, + {"CAA", "Q"}, + {"CAG", "Q"}, + {"CGT", "R"}, + {"CGG", "R"}, + {"ATT", "I"}, + {"ATC", "I"}, + {"ATA", "M"}, + {"ATG", "M"}, + {"ACT", "T"}, + {"ACC", "T"}, + {"ACA", "T"}, + {"ACG", "T"}, + {"AAT", "N"}, + {"AAC", "N"}, + {"AAA", "K"}, + {"AAG", "K"}, + {"AGT", "S"}, + {"AGC", "S"}, + {"AGA", "R"}, + {"AGG", "R"}, + {"GTT", "V"}, + {"GTC", "V"}, + {"GTA", "V"}, + {"GTG", "V"}, + {"GCT", "A"}, + {"GCC", "A"}, + {"GCA", "A"}, + {"GCG", "A"}, + {"GAT", "D"}, + {"GAC", "D"}, + {"GAA", "E"}, + {"GAG", "E"}, + {"GGT", "G"}, + {"GGC", "G"}, + {"GGA", "G"}, + {"GGG", "G"} +}; + + +// https://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi?chapter=cgencodes#SG5 +static std::map invert_mtdna_ = { + {"TTT", "F"}, + {"TTC", "F"}, + {"TTA", "L"}, + {"TTG", "L"}, + {"TCT", "S"}, + {"TCC", "S"}, + {"TCA", "S"}, + {"TCG", "S"}, + {"TAT", "Y"}, + {"TAC", "Y"}, + {"TAA", "*"}, + {"TAG", "*"}, + {"TGT", "C"}, + {"TGC", "C"}, + {"TGA", "W"}, + {"TGG", "W"}, + {"CTT", "L"}, + {"CTC", "L"}, + {"CTA", "L"}, + {"CTG", "L"}, + {"CCT", "P"}, + {"CCC", "P"}, + {"CCA", "P"}, + {"CCG", "P"}, + {"CAT", "H"}, + {"CAC", "H"}, + {"CAA", "Q"}, + {"CAG", "Q"}, + {"CGT", "R"}, + {"CGC", "R"}, + {"CGA", "R"}, + {"CGG", "R"}, + {"ATT", "I"}, + {"ATC", "I"}, + {"ATA", "M"}, + {"ATG", "M"}, + {"ACT", "T"}, + {"ACC", "T"}, + {"ACA", "T"}, + {"ACG", "T"}, + {"AAT", "N"}, + {"AAC", "N"}, + {"AAA", "K"}, + {"AAG", "K"}, + {"AGT", "S"}, + {"AGC", "S"}, + {"AGA", "S"}, + {"AGG", "S"}, + {"GTT", "V"}, + {"GTC", "V"}, + {"GTA", "V"}, + {"GTG", "V"}, + {"GCT", "A"}, + {"GCC", "A"}, + {"GCA", "A"}, + {"GCG", "A"}, + {"GAT", "D"}, + {"GAC", "D"}, + {"GAA", "E"}, + {"GAG", "E"}, + {"GGT", "G"}, + {"GGC", "G"}, + {"GGA", "G"}, + {"GGG", "G"} +}; + + +/*******************************************************/ + + +std::string TLATE::translate (std::string& dna) { + std::string codon; + std::string AminoAcid; + std::string residue; + //std::string AA; // not used + + dna = string_to_upper(dna); + + for (unsigned int i = 0; i < dna.size(); i = i + 3) { + codon = dna.substr(i, 3); + if (table_.find(codon) == table_.end()) { + residue = "X"; + } else { + residue = table_[codon]; + } + AminoAcid += residue; + codon = ""; + } + return AminoAcid; +} + + +TLATE::TLATE (const std::string& table) { + // where the translation table is set + if (table == "std") { + table_ = standard_; + } else if (table == "vmt") { + table_ = vert_mtdna_; + } else if (table == "ymt") { + table_ = yeast_mtdna_; + } else if (table == "ivmt") { + table_ = invert_mtdna_; + } else { + std::cerr << "Error: table argument '" << table << "' not recognized. Exiting." << std::endl; + exit(0); + } +} + diff --git a/src/tlate.h b/src/tlate.h new file mode 100644 index 0000000..798380e --- /dev/null +++ b/src/tlate.h @@ -0,0 +1,17 @@ +#ifndef PX_TLATE_H +#define PX_TLATE_H + +#include +#include + +class TLATE { +private: + std::map table_; + +public: + explicit TLATE (const std::string& table); + std::string translate (std::string& dna); + //virtual ~tlate(); +}; + +#endif /* PX_TLATE_H */ diff --git a/src/tree.cpp b/src/tree.cpp new file mode 100644 index 0000000..6d97823 --- /dev/null +++ b/src/tree.cpp @@ -0,0 +1,632 @@ +#include +#include +#include +#include +#include +#include + +#include "node.h" +#include "tree.h" + + +Tree::Tree ():internal_node_count_(0), external_node_count_(0), edge_lengths_(false), + node_annotations_(false), internal_node_names_(false) { + root_ = nullptr; + processRoot(); +} + + +Tree::Tree (Node * inroot):internal_node_count_(0), external_node_count_(0), + edge_lengths_(false), node_annotations_(false), internal_node_names_(false) { + root_ = inroot; + processRoot(); +} + + +void Tree::addExternalNode (Node * tn) { + external_nodes_.push_back(tn); + external_node_count_++; + nodes_.push_back(tn); +} + + +void Tree::addInternalNode (Node * tn) { + internal_nodes_.push_back(tn); + internal_node_count_++; + nodes_.push_back(tn); +} + + +Node * Tree::getExternalNode (unsigned int num) { + return external_nodes_.at(static_cast(num)); +} + + +/* + * could precompute this, check for run time differences + */ +Node * Tree::getExternalNode (const std::string& name) { + Node * ret = nullptr; + for (size_t i = 0; i < external_node_count_; i++) { + if (external_nodes_.at(i)->getName() == name) { + ret = external_nodes_.at(i); + } + } + return ret; +} + + +Node * Tree::getInternalNode (unsigned int num) { + return internal_nodes_.at(static_cast(num)); +} + + +/* + * could precompute this, check for run time differences + */ +Node * Tree::getInternalNode (std::string& name) { + Node * ret = nullptr; + for (size_t i = 0; i < internal_node_count_; i++) { + if (internal_nodes_.at(i)->getName() == name) { + ret = internal_nodes_.at(i); + } + } + return ret; +} + + +unsigned int Tree::getExternalNodeCount () const { + return external_node_count_; +} + + +unsigned int Tree::getExtantNodeCount () { + setHeightFromRootToNodes(); + double largest = 0; + for (unsigned int i = 0; i < external_node_count_; i++) { + double th = getExternalNode(i)->getHeight(); + if (th > largest) { + largest = th; + } + } + unsigned int count = 0; + for (unsigned int i = 0; i < external_node_count_; i++) { + double th = getExternalNode(i)->getHeight(); + if (fabs(th-largest) < 0.00001) { + count += 1; + } + } + return count; +} + + +// NOTE: this includes the root +unsigned int Tree::getInternalNodeCount () const { + return internal_node_count_; +} + + +Node * Tree::getNode (unsigned int num) { + return nodes_.at(static_cast(num)); +} + + +Node * Tree::getNode (std::string& name) { + Node * ret = nullptr; + if (name_node_map_.empty()) { + for (auto & node : nodes_) { + if (!node->getName().empty()) { + name_node_map_[node->getName()] = node; + } + } + } + if (name_node_map_.count(name) != 0) { + ret = name_node_map_[name]; + } + return ret; +} + + +unsigned int Tree::getNodeCount () const { + return static_cast(nodes_.size()); +} + + +Node * Tree::getRoot () const { + return root_; +} + + +void Tree::setRoot (Node * inroot) { + root_ = inroot; +} + + +void Tree::setEdgeLengthsPresent (bool res) { + edge_lengths_ = res; +} + + +void Tree::setNodeAnnotationsPresent (bool res) { + node_annotations_ = res; +} + + +bool Tree::hasNodeAnnotations () const { + return node_annotations_; +} + + +void Tree::setNodeNamesPresent (bool res) { + internal_node_names_ = res; +} + + +bool Tree::hasNodeNames () const { + return internal_node_names_; +} + + +bool Tree::hasEdgeLengths () const { + return edge_lengths_; +} + + +void Tree::unRoot () { + processRoot(); + if (this->getRoot()->getChildCount() < 3) { + tritomyRoot(nullptr); + processRoot(); + } +} + + +/* + * seems to be working but check for leaks + */ +bool Tree::reRoot (Node * inroot) { + processRoot(); + bool ret = true; + if (this->getRoot()->getChildCount() < 3) { + tritomyRoot(nullptr); // not sure if this should actually be the inroot instead of nullptr + } + //std::cout << this->root->getNewick(false) << std::endl; + if (root_ == inroot) { + std::cerr << "you asked to root at the current root" << std::endl; + ret = false; + } else { + Node * tempParent = inroot->getParent(); + auto * newRoot = new Node(tempParent); + newRoot->addChild(*inroot); + inroot->setParent(*newRoot); + tempParent->removeChild(*inroot); + tempParent->addChild(*newRoot); + newRoot->setParent(*tempParent); + newRoot->setBL(inroot->getBL() / 2); + inroot->setBL(inroot->getBL() / 2); + processReRoot(newRoot); + setRoot(newRoot); + processRoot(); + // duplicate support information (if present) for display purposes + duplicateRootSupport(); + } + return ret; +} + + +void Tree::removeRootEdge () { + while (true) { + if (root_->getChildCount() == 1) { + /* + 1. grab child + 2. set child as new root + 3. delete old root + 4. reprocess tree? + */ + Node * curr = root_->getChild(0); + delete root_; + setRoot(curr); + processRoot(); + } else { + break; + } + } +} + + +void Tree::duplicateRootSupport () { + std::vector kids = root_->getChildren(); + bool supfound = false; + std::vector sups; + unsigned int numnodes = 0; // want to guard against when only 1 outgroup + for (auto & kid : kids) { + if (kid->isInternal()) { + numnodes++; + std::string x = kid->getName(); // support stored in name property + if (!x.empty()) { + supfound = true; + sups.push_back(x); + } + } + } + if (supfound) { + if (numnodes > sups.size()) { + if (sups.size() == 1) { + for (auto & kid : kids) { + if (kid->isInternal()) { + std::string x = kid->getName(); + if (x.empty()) { + kid->setName(sups[0]); + } + } + } + } else { + std::cout << "i don't know how this might happen..." << std::endl; + } + } + } +} + + +/* + * seems to be working now + */ +void Tree::tritomyRoot (Node * toberoot) { + Node * curroot = this->getRoot(); + if (toberoot == nullptr) { + if (curroot->getChild(0)->isInternal()) { + Node * currootCH = curroot->getChild(0); + double nbl = currootCH->getBL(); + curroot->getChild(1)->setBL(curroot->getChild(1)->getBL() + nbl); + curroot->removeChild(*currootCH); + for (unsigned int i = 0; i < currootCH->getChildCount(); i++) { + curroot->addChild(*currootCH->getChild(i)); + //currootCH.getChild(i).setParent(curroot); + } + } else { + Node * currootCH = curroot->getChild(1); + double nbl = currootCH->getBL(); + curroot->getChild(0)->setBL(curroot->getChild(0)->getBL() + nbl); + curroot->removeChild(*currootCH); + for (unsigned int i = 0; i < currootCH->getChildCount(); i++) { + curroot->addChild(*currootCH->getChild(i)); + //currootCH.getChild(i).setParent(curroot); + } + } + } else { + if (curroot->getChild(1) == toberoot) { + Node * currootCH = curroot->getChild(0); + double nbl = currootCH->getBL(); + curroot->getChild(1)->setBL(curroot->getChild(1)->getBL() + nbl); + curroot->removeChild(*currootCH); + for (unsigned int i = 0; i < currootCH->getChildCount(); i++) { + curroot->addChild(*currootCH->getChild(i)); + //currootCH.getChild(i).setParent(curroot); + } + } else { + Node * currootCH = curroot->getChild(1); + double nbl = currootCH->getBL(); + curroot->getChild(0)->setBL(curroot->getChild(0)->getBL() + nbl); + curroot->removeChild(*currootCH); + for (unsigned int i = 0; i < currootCH->getChildCount(); i++) { + curroot->addChild(*currootCH->getChild(i)); + //currootCH.getChild(i).setParent(curroot); + } + } + } +} + + +Node * Tree::getMRCA (std::vector innodes) { + Node * mrca = nullptr; + if (innodes.size() == 1) { + return this->getExternalNode(innodes[0]); + } + std::vector outgroup; + outgroup.reserve(static_cast(innodes.size())); + for (const auto & innode : innodes) { + outgroup.push_back(innode); + } + Node * cur1 = this->getExternalNode(outgroup.at(0)); + outgroup.erase(outgroup.begin()); + Node * cur2 = nullptr; + Node * tempmrca = nullptr; + while (!outgroup.empty()) { + cur2 = this->getExternalNode(outgroup.at(0)); + outgroup.erase(outgroup.begin()); + tempmrca = getMRCATraverse(cur1, cur2); + cur1 = tempmrca; + } + mrca = cur1; + return mrca; +} + + +Node * Tree::getMRCA (std::vector innodes) { + Node * mrca = nullptr; + if (innodes.size() == 1) { + return innodes[0]; + } + Node * cur1 = innodes.at(0); + innodes.erase(innodes.begin()); + Node * cur2 = nullptr; + Node * tempmrca = nullptr; + while (!innodes.empty()) { + cur2 = innodes.at(0); + innodes.erase(innodes.begin()); + tempmrca = getMRCATraverse(cur1, cur2); + cur1 = tempmrca; + } + mrca = cur1; + return mrca; +} + + +/** + * when the MRCA is returned as root, this will find + * the other node, internal that can serve as another root + */ +// looks like lots missing here! +Node * Tree::getInternalMRCA (std::vector& innodes) { + Node * mrca = nullptr; + //std::set original; // original set of nodes. not used + if (innodes.size() == 1) { + return this->getExternalNode(innodes[0]); + } //else { + // first get the root set + // then get the leaves set + // the difference will give the root back + // we want to choose a node that has all of the outgroups + // and the smallest number of other nodes + // this is the best case when there + for (unsigned int i = 0; i < this->getInternalNodeCount(); i++) { + + // NOTE: this is missing! + + } + //} + return mrca; +} + + +void Tree::setHeightFromRootToNodes () { + setHeightFromRootToNode(*this->root_, this->root_->getBL()); +} + + +// this should be called depth +void Tree::setHeightFromRootToNode (Node& inNode, double newHeight) { + if (!inNode.isRoot()) { + newHeight += inNode.getBL(); + inNode.setHeight(newHeight); + } else { + inNode.setHeight(newHeight); + } + for (unsigned int i = 0; i < inNode.getChildCount(); i++) { + setHeightFromRootToNode(*inNode.getChild(i), newHeight); + } +} + + +/* + * only makes sense for ultrametric trees + */ +void Tree::setHeightFromTipToNodes () { + for (unsigned int i = 0; i < external_node_count_; i++) { + double curh = 0.0; + Node * cur = this->getExternalNode(i); + cur->setHeight(curh); + while (cur->getParent() != nullptr) { + curh += cur->getBL(); + cur = cur->getParent(); + if (cur->getHeight() < curh) { + cur->setHeight(curh); + } + } + } +} + + +/* + * private +*/ +void Tree::processRoot () { + nodes_.clear(); + internal_nodes_.clear(); + external_nodes_.clear(); + internal_node_count_ = 0; + external_node_count_ = 0; + // this is always false + /* + if (&root_ == nullptr) { + return; + } + */ + postOrderProcessRoot(root_); +} + + +void Tree::processReRoot (Node * node) { + if (node->isRoot() || node->isExternal()) { + return; + } + if (node->getParent() != nullptr) { + processReRoot(node->getParent()); + } + // Exchange branch label, length et cetera + exchangeInfo(node->getParent(), node); + // Rearrange topology + Node * parent = node->getParent(); + node->addChild(*parent); + parent->removeChild(*node); + parent->setParent(*node); +} + + +void Tree::exchangeInfo(Node * node1, Node * node2) { + std::string swaps; + double swapd; + swaps = node1->getName(); + node1->setName(node2->getName()); + node2->setName(swaps); + + swapd = node1->getBL(); + node1->setBL(node2->getBL()); + node2->setBL(swapd); +} + + +void Tree::exchangeNodes (Node * node1, Node * node2) { + Node * par1 = node1->getParent(); + Node * par2 = node2->getParent(); + bool bp1 = par1->removeChild(*node1); + assert(bp1); + bool bp2 = par2->removeChild(*node2); + assert(bp2); + par1->addChild(*node2); + par2->addChild(*node1); +} + + +void Tree::postOrderProcessRoot (Node * node) { + if (node == nullptr) { + return; + } + if (node->getChildCount() > 0) { + for (unsigned int i = 0; i < node->getChildCount(); i++) { + postOrderProcessRoot(node->getChild(i)); + } + } + if (node->isExternal()) { + addExternalNode(node); + node->setNumber(external_node_count_); + } else { + addInternalNode(node); + node->setNumber(internal_node_count_); + } +} + + +/* + * how this works + * + * get the parent = parent + * get the parent of the parent = mparent + * remove parent from mparent + * add !node from parent to mparent + * + * doesn't yet take care if node.parent == root + * or polytomy +*/ +void Tree::pruneExternalNode (Node * node) { + if (node->isInternal()) { + return; + } + Node * parent = node->getParent(); + if (parent->getChildCount() == 2) { + Node * other = nullptr; + for (unsigned int i = 0; i < parent->getChildCount(); i++) { + if (parent->getChild(i) != node) { + other = parent->getChild(i); + } + } + double bl = other->getBL()+parent->getBL(); + Node * mparent = parent->getParent(); + if (mparent != nullptr) { + mparent->addChild(*other); + other->setBL(bl); + for (unsigned int i = 0; i < mparent->getChildCount(); i++) { + if (mparent->getChild(i) == parent) { + mparent->removeChild(*parent); + break; + } + } + } else { + root_ = other; + //std::cout << "i am here apparently..." << std::endl; + } + } else { + parent->removeChild(*node); + } + delete node; + this->processRoot(); +} + + +void Tree::pruneInternalNode (Node * node) { + if (node->isExternal()) { + return; + } + /* + * how this works + * + * store edge length of node: pel (points to `grandparent') + * get the grandparent node = gparent + * for each child of node, set parent to gparent, adding pel to existing edge length + * delete node + * + * doesn't yet deal with possibility that node is the root (i.e. no parent) + * - this will arise with unrooted trees + */ + double pel = node->getBL(); + //std::cout << "Parent edge length: " << pel << std::endl; + Node * gparent = node->getParent(); + + for (unsigned int i = 0; i < node->getChildCount(); i++) { + Node * child = node->getChild(i); + //std::cout << " " << i << ". Original edge length: " << child->getBL() << std::endl; + double newEL = pel + child->getBL(); + //std::cout << " New edge length: " << newEL << std::endl; + child->setBL(newEL); + gparent->addChild(*child); + } + // now get rid of it + gparent->removeChild(*node); + delete node; + this->processRoot(); +} + + +Node * Tree::getMRCATraverse (Node * curn1, Node * curn2) { + Node * mrca = nullptr; + //get path to root for first node + std::vector path1; + Node * parent = curn1; + path1.push_back(parent); + while (parent != nullptr) { + path1.push_back(parent); + if (parent->getParent() != nullptr) { + parent = parent->getParent(); + } else { + break; + } + } + //find first match between this node and the first one + parent = curn2; + bool x = true; + while (x) { + for (auto & i : path1) { + if (parent == i) { + mrca = parent; + x = false; + break; + } + } + parent = parent->getParent(); + } + return mrca; +} + + +/* + * end private + */ + +Tree::~Tree () { + for (unsigned int i = 0; i < internal_node_count_; i++) { + delete getInternalNode(i); + } + for (unsigned int i = 0; i < external_node_count_; i++) { + delete getExternalNode(i); + } +} diff --git a/src/tree.h b/src/tree.h new file mode 100644 index 0000000..d0e3d82 --- /dev/null +++ b/src/tree.h @@ -0,0 +1,74 @@ +#ifndef PX_TREE_H +#define PX_TREE_H + +#include +#include +#include + +#include "node.h" + + +class Tree { +private: + Node * root_; + std::vector nodes_; + std::vector internal_nodes_; + std::vector external_nodes_; + std::map name_node_map_; + unsigned int internal_node_count_; + unsigned int external_node_count_; + bool edge_lengths_; + bool node_annotations_; + bool internal_node_names_; + + void processReRoot (Node * node); + void exchangeInfo (Node * node1, Node * node2); + void postOrderProcessRoot (Node * node); + Node * getMRCATraverse (Node * curn1, Node * curn2); + void setHeightFromRootToNode (Node& inNode, double newHeight); + double getGreatestDistance (Node * inNode); + +public: + Tree (); + explicit Tree (Node * inroot); + Tree * clone () { return new Tree(*this); } + + void addExternalNode (Node * tn); + void addInternalNode (Node * tn); + void pruneExternalNode (Node * node); + void pruneInternalNode (Node * node); + Node * getExternalNode (unsigned int num); + Node * getExternalNode (const std::string& name); + Node * getInternalNode (unsigned int num); + Node * getInternalNode (std::string& name); + Node * getNode (unsigned int num); + Node * getNode (std::string& name); + unsigned int getNodeCount () const; + unsigned int getExtantNodeCount (); + unsigned int getExternalNodeCount () const; + unsigned int getInternalNodeCount () const; + Node * getRoot () const; + void setRoot (Node * inroot); + void setEdgeLengthsPresent (bool res); + bool hasEdgeLengths () const; + void setNodeAnnotationsPresent (bool res); + bool hasNodeAnnotations () const; + void setNodeNamesPresent (bool res); + bool hasNodeNames () const; + void unRoot (); + bool reRoot (Node * inroot); + void duplicateRootSupport (); + void tritomyRoot (Node * toberoot); + Node * getMRCA (std::vector innodes); + Node * getMRCA (std::vector innodes); + Node * getInternalMRCA (std::vector& innodes); + void processRoot (); + void exchangeNodes (Node * node1, Node * node2); + void removeRootEdge (); + void setHeightFromRootToNodes (); + void setHeightFromTipToNodes (); + + ~Tree (); +}; + +#endif /* PX_TREE_H */ diff --git a/src/tree_info.cpp b/src/tree_info.cpp new file mode 100644 index 0000000..1e66a1b --- /dev/null +++ b/src/tree_info.cpp @@ -0,0 +1,120 @@ +#include +#include +#include +#include +#include + +#include "tree_info.h" +#include "tree.h" +#include "node.h" +#include "tree_utils.h" + + +TreeInfo::TreeInfo (Tree * intree):rooted_tree_(false), ultrametric_tree_(false), + binary_tree_(false), has_branchlengths_(false), treelength_(0.0), + nintnodes_(0.0), ntips_(0.0), rootheight_(0.0), rtvar_(0.0) { + tree_ = intree; + calc_stats(); +} + + +TreeInfo::TreeInfo (Tree * intree, const bool& ultracheck, const bool& binarycheck, + const bool& agecheck, const bool& rootedcheck, const bool& ntipcheck, + const bool& lengthcheck, const bool& namecheck, const bool& rtvarcheck, + std::ostream* poos):nintnodes_(0.0) { + tree_ = intree; + if (ultracheck) { + ultrametric_tree_ = is_ultrametric_paths(tree_); + (*poos) << std::boolalpha << ultrametric_tree_ << std::endl; + } else if (rtvarcheck) { + has_branchlengths_ = tree_->hasEdgeLengths(); + if (has_branchlengths_) { + rtvar_ = get_root_tip_var(tree_); + (*poos) << rtvar_ << std::endl; + } else { + (*poos) << "NA" << std::endl; + } + } else if (binarycheck) { + binary_tree_ = is_binary(tree_); + (*poos) << std::boolalpha << binary_tree_ << std::endl; + } else if (agecheck) { + ultrametric_tree_ = is_ultrametric_paths(tree_); + if (ultrametric_tree_) { + rootheight_ = tree_->getRoot()->getHeight(); + (*poos) << rootheight_ << std::endl; + } else { + (*poos) << "NA" << std::endl; + } + } else if (rootedcheck) { + rooted_tree_ = is_rooted(tree_); + (*poos) << std::boolalpha << rooted_tree_ << std::endl; + } else if (ntipcheck) { + ntips_ = tree_->getExternalNodeCount(); + (*poos) << ntips_ << std::endl; + } else if (lengthcheck) { + has_branchlengths_ = tree_->hasEdgeLengths(); + if (has_branchlengths_) { + treelength_ = get_tree_length(tree_); + (*poos) << treelength_ << std::endl; + } else { + (*poos) << "NA" << std::endl; + } + } else if (namecheck) { + tip_labels_ = get_tip_labels(tree_); + for (const auto & tip_label : tip_labels_) { + (*poos) << tip_label << std::endl; + } + } +} + + +void TreeInfo::calc_stats () { + has_branchlengths_ = tree_->hasEdgeLengths(); + if (has_branchlengths_) { + treelength_ = get_tree_length(tree_); + } else { + treelength_ = 0.0; + } + nintnodes_ = tree_->getInternalNodeCount(); + ntips_ = tree_->getExternalNodeCount(); + rooted_tree_ = is_rooted(tree_); + binary_tree_ = is_binary(tree_); + ultrametric_tree_ = is_ultrametric_paths(tree_); + if (rooted_tree_) { + rtvar_ = get_root_tip_var(tree_); + } else { + rtvar_ = 0.0; + } + if (ultrametric_tree_) { + rootheight_ = tree_->getRoot()->getHeight(); + } else { + rootheight_ = 0.0; + } +} + + +void TreeInfo::get_stats (std::ostream* poos) const { + (*poos) << "rooted: " << std::boolalpha << rooted_tree_ << std::endl; + (*poos) << "binary: " << std::boolalpha << binary_tree_ << std::endl; + (*poos) << "nterminal: " << ntips_ << std::endl; + (*poos) << "ninternal: " << nintnodes_ << std::endl; + (*poos) << "branch lengths: " << std::boolalpha << has_branchlengths_ << std::endl; + if (has_branchlengths_) { + if (rooted_tree_) { + (*poos) << "rttipvar: " << rtvar_ << std::endl; + } else { + (*poos) << "rttipvar: NA" << std::endl; + } + (*poos) << "treelength: " << treelength_ << std::endl; + (*poos) << "ultrametric: " << std::boolalpha << ultrametric_tree_ << std::endl; + } else { + (*poos) << "rttipvar: NA" << std::endl; + (*poos) << "treelength: NA" << std::endl; + (*poos) << "ultrametric: NA" << std::endl; + } + if (ultrametric_tree_) { + (*poos) << "rootheight: " << rootheight_ << std::endl; + } else { + (*poos) << "rootheight: NA" << std::endl; + } +} diff --git a/src/tree_info.h b/src/tree_info.h new file mode 100644 index 0000000..84c6254 --- /dev/null +++ b/src/tree_info.h @@ -0,0 +1,35 @@ +#ifndef PX_LS_TR_H +#define PX_LS_TR_H + +#include +#include +#include + +class Tree; // forward declaration + +class TreeInfo { +private: + Tree* tree_; + bool rooted_tree_; + bool ultrametric_tree_; + bool binary_tree_; + bool has_branchlengths_; + double treelength_; + double nintnodes_; + double ntips_; + double rootheight_; + double rtvar_; + std::vector tip_labels_; + + void calc_stats (); + +public: + explicit TreeInfo (Tree * intree); + TreeInfo (Tree * intree, const bool& ultracheck, const bool& binarycheck, + const bool& agecheck, const bool& rootedcheck, const bool& ntipcheck, + const bool& lengthcheck, const bool& namecheck, const bool& rtvarcheck, + std::ostream* poos); + void get_stats (std::ostream* poos) const; +}; + +#endif /* PX_LS_TR_H */ diff --git a/src/tree_reader.cpp b/src/tree_reader.cpp new file mode 100644 index 0000000..c896545 --- /dev/null +++ b/src/tree_reader.cpp @@ -0,0 +1,464 @@ +#include +#include +#include +#include +#include +#include +#include +#include + +#include "node.h" +#include "tree.h" +#include "tree_reader.h" +#include "utils.h" + + +TreeReader::TreeReader() = default; + + +/* + * the tree pointer coming in should just be a new Tree() + * we should take this out as soon as we are ready to repoint + * the existing code to the right bits +*/ +Tree * TreeReader::readTree (const std::string& pb) { + auto * tree = new Tree(); + //std::string pb = trees; + unsigned int x = 0; + char nextChar = pb.at(x); + bool start = true; + bool keepGoing = true; + bool in_quote = false; + bool hasAnnotations = false; + bool hasInternalNodeNames = false; + char quoteType = '\0'; + Node * currNode = nullptr; + double sumEL = 0.0; + while (keepGoing) { + //std::cout << "Working on: " << nextChar << std::endl; + if (nextChar == '(') { + if (start) { + auto * root = new Node(); + tree->setRoot(root); + currNode = root; + start = false; + } else { + if (currNode == nullptr) { + std::cerr << "Malformed newick string. Can read until char " << x << "." << std::endl; + exit(1); + } + auto * newNode = new Node(currNode); + currNode->addChild(*newNode); + currNode = newNode; + } + } else if (nextChar == ',') { + currNode = currNode->getParent(); + } else if (nextChar == ')') { + // internal named node (or more likely support annotation) + currNode = currNode->getParent(); + x++; + nextChar = pb.at(x); + //std::cout << "Working on: " << nextChar << std::endl; + std::string nodeName; + bool goingName = true; + in_quote = false; + if (nextChar == ',' || nextChar == ')' || nextChar == ':' + || nextChar == ';' || nextChar == '[') { + goingName = false; + } else if (nextChar == '"' || nextChar == '\'') { + in_quote = true; + quoteType = nextChar; + nodeName += nextChar; + } + if (!in_quote) { + while (goingName) { + nodeName += nextChar; + x++; + nextChar = pb.at(x); + if (nextChar == ',' || nextChar == ')' || nextChar == ':' + || nextChar == '[' || nextChar == ';') { + break; + } + } + x--; + } else { + x++; + nextChar = pb.at(x); + while (goingName) { + nodeName += nextChar; + x++; + nextChar = pb.at(x); + if (nextChar == quoteType) { + nodeName += nextChar; + if (quoteType == '"') { + break; + } + // check for double single quotes + x++; + nextChar = pb.at(x); + if (nextChar != quoteType) { + x--; + break; + } + } + } + }// work on edge + currNode->setName(nodeName); + //std::cout << nodeName << std::endl; + if (!nodeName.empty()) { + hasInternalNodeNames = true; + } + if (!in_quote) { + //x--; + } + } else if (nextChar == ';') { + keepGoing = false; + } else if (nextChar == ':') { + // edge length + x++; + nextChar = pb.at(x); + std::string edgeL; + while (true) { + edgeL += nextChar; + x++; + nextChar = pb.at(x); + if (nextChar == ',' || nextChar == ')' || nextChar == ':' + || nextChar == ';'|| nextChar == '[') { + break; + } + } // work on edge + double edd = strtod(edgeL.c_str(), nullptr); + currNode->setBL(edd); + sumEL += edd; + x--; + } + // note/annotation + else if (nextChar == '[') { + hasAnnotations = true; + x++; + nextChar = pb.at(x); + std::string note; + while (true) { + note += nextChar; + x++; + nextChar = pb.at(x); + if (nextChar == ']' ) { + break; + } + } + currNode->setComment(note); + } else if (nextChar == ' ') { + // just skip internal whitespace + } + // external named node + else { + auto * newNode = new Node(currNode); + currNode->addChild(*newNode); + currNode = newNode; + std::string nodeName; + bool goingName = true; + in_quote = false; + if (nextChar == '"' || nextChar == '\'') { + in_quote = true; + quoteType = nextChar; + nodeName += nextChar; + } + if (!in_quote) { + while (goingName) { + nodeName += nextChar; + x++; + nextChar = pb.at(x); + if (nextChar == ',' || nextChar == ')' || nextChar == ':' + || nextChar == '[') { + break; + } + } + x--; + } else { + x++; + nextChar = pb.at(x); + while (goingName) { + nodeName += nextChar; + x++; + nextChar = pb.at(x); + if (nextChar == quoteType) { + nodeName += nextChar; + if (quoteType == '"') { + break; + } + // check for double single quotes + x++; + nextChar = pb.at(x); + if (nextChar != quoteType) { + x--; + break; + } + } + } + } + //std::cout << nodeName << std::endl; + newNode->setName(nodeName); + } + if (x < pb.length() - 1) { // added + x++; + } + nextChar = pb.at(x); + } + //bool hasEdgeLengths = (sumEL > 0.0) ? true : false; + bool hasEdgeLengths = sumEL > 0.0; + tree->setEdgeLengthsPresent(hasEdgeLengths); + //std::cout << "hasAnnotations = " << hasAnnotations << std::endl; + tree->setNodeAnnotationsPresent(hasAnnotations); + //std::cout << "hasInternalNodeNames = " << hasInternalNodeNames << std::endl; + tree->setNodeNamesPresent(hasInternalNodeNames); + tree->processRoot(); + return tree; +} + + +/* + * tests the filetype by checking the first string and guessing based on + * #nexus, ( newick + * returns in the order above, 0, 1, 666 --- no filetype recognized + * currently this only tests for nexus and newick + * if it is nexus, then the nexus reader will need + * to deal with translate or not + */ +// hrm this does not seem to be used anymore +int test_tree_filetype (const std::string& filen) { + std::string tline; + std::ifstream infile(filen.c_str()); + int ret = 666; // if you get 666, there is no filetype set + while (getline_safe(infile, tline)) { + if (tline.empty()) { + continue; + } + //nexus + if (tline[0] == '#') { + ret = 0; + break; + } + //newick + if (tline[0] == '(') { + ret = 1; + break; + } + break; + } + infile.close(); + return ret; +} + + +/* tests the filetype by checking the first string and guessing based on + * #nexus, ( newick + * returns in the order above, 0, 1, 666 --- no filetype recognized + */ +int test_tree_filetype_stream (std::istream& stri, std::string& retstring) { + if (!getline_safe(stri, retstring)) { + std::cout << "ERROR: end of file too soon" << std::endl; + } + int ret = 666; // if you get 666, there is no filetype set + if (retstring[0] == '#') { + ret = 0; + } else if (retstring[0] == '(') { + ret = 1; + } + return ret; +} + + +/** + * this will look for the translation table if it exists + */ +bool get_nexus_translation_table (std::istream& stri, std::map * trans, std::string * retstring) { + std::string line1; + std::string del(" \t"); + std::vector tokens; + bool exists = false; // is there a translation table? + bool going = true; + bool begintrees = false; + bool tgoing = false; + while (going) { + if (!getline_safe(stri, line1)) { + break; + } + trim_spaces(line1); + if (line1.empty()) { + continue; + } + //std::cout << "Working on: " << line1 << std::endl; + (*retstring) = line1; + std::string uc = string_to_upper(line1); + if (uc.find("TRANSLATE") != std::string::npos) { + tgoing = true; + exists = true; + //std::cout << "Found translation table!" << std::endl; + continue; + } + if (begintrees && !tgoing) { + //std::cout << "No translation table present!" << std::endl; + return false; + } + if (uc.find("BEGIN TREES") != std::string::npos) { + begintrees = true; + //std::cout << "Found Begin trees!" << std::endl; + } + if (tgoing) { + //trimspaces and split up strings + tokens.clear(); + tokenize(line1, tokens, del); + size_t endcheck = line1.find(';'); + if (endcheck != std::string::npos) { // semicolon present. this is the last line. + //std::cout << "Ending translation table!" << std::endl; + going = false; + (*retstring) = ""; + } + if (tokens.size() != 1) { // not trailing lone semicolon + for (auto & tk : tokens) { + trim_spaces(tk); + } + size_t found = tokens[1].find(','); + if (found != std::string::npos) { + tokens[1].erase(found, 1); + } + if (!going) { + size_t found2 = tokens[1].find(';'); + if (found2 != std::string::npos) { + tokens[1].erase(found2, 1); + } + } + (*trans)[tokens[0]] = tokens[1]; + //std::cout << "tokens[0] = " << tokens[0] << "; tokens[1] = " << tokens[1] << std::endl; + } + } + } + return exists; +} + + +/* + * this will read the nexus file after processing translating + * should add some error correction code here +*/ +Tree * read_next_tree_from_stream_nexus (std::istream& stri, std::string& retstring, + bool ttexists, std::map * trans, bool * going) { + std::string tline; + if (!retstring.empty()) { + tline = retstring; + retstring = ""; + bool done = false; + while (!done) { + if (check_nexus_comment(tline)) { + //std::cout << "yikes a comment!" << std::endl; + process_nexus_comment(stri, tline); + getline_safe(stri, tline); + } else if (tline.empty()) { + //std::cout << "empty line. keep reading!" << std::endl; + getline_safe(stri, tline); + } else { + done = true; + } + } + } else { + bool reading = true; // continue reading if lines are empty or comments + while (reading) { + if (!getline_safe(stri, tline)) { + (*going) = false; + return nullptr; + } + trim_spaces(tline); // important! + if (!tline.empty()) { + if (check_nexus_comment(tline)) { + process_nexus_comment(stri, tline); + } else { + reading = false; + } + } else { + //std::cout << "Skipping empty line" << std::endl; + } + } + } + //std::cout << "Working on: " << tline << std::endl; + std::string uc = string_to_upper(tline); + if (uc.find("END;") != std::string::npos) { + (*going) = false; + return nullptr; + } + //vector tokens; + //string del(" \t"); + //tokenize(tline, tokens, del); + //string tstring(tokens[tokens.size()-1]); + + size_t startpos = tline.find_first_of('('); + std::string tstring = tline.substr(startpos); + Tree * tree; + //std::cout << tstring << std::endl; + TreeReader tr; + tree = tr.readTree(tstring); + if (ttexists) { + for (unsigned int i = 0; i < tree->getExternalNodeCount(); i++) { + tree->getExternalNode(i)->setName((*trans)[tree->getExternalNode(i)->getName()]); + } + } + return tree; +} + + +/* + * this is simple as each line is a tree + */ +// adding a simple check: if line is empty, assume we're done +// TODO: deal with trees with internal line breaks (phylip does this?) +Tree * read_next_tree_from_stream_newick (std::istream& stri, std::string& retstring, + bool * going) { + std::string tline; + if (!retstring.empty()) { + tline = retstring; + retstring = ""; + } else if (!getline_safe(stri, tline)) { + (*going) = false; + return nullptr; + } + trim_spaces(tline); + + // hrm do we want to allow empty lines in between trees? i think so? + if (tline.empty()) { + //std::cout << "You've got yerself an empty line, there." << std::endl; + bool done = false; + while (!done) { + if (!getline_safe(stri, tline)) { + (*going) = false; + return nullptr; + } + trim_spaces(tline); + if (!tline.empty()) { + done = true; + } + } + } + + if (tline.back() != ';') { + bool done = false; + std::string terp; + while (!done) { + if (!getline_safe(stri, terp)) { + std::cerr << "Error: malformed tree string (missing trailing semicolon). Exiting." + << std::endl; + exit(1); + } else { + trim_spaces(terp); + tline += terp; + if (tline.back() == ';') { + done = true; + } + } + } + } + + Tree * tree; + TreeReader tr; + tree = tr.readTree(tline); + return tree; +} diff --git a/src/tree_reader.h b/src/tree_reader.h new file mode 100644 index 0000000..4bb8a0d --- /dev/null +++ b/src/tree_reader.h @@ -0,0 +1,28 @@ +#ifndef PX_TREE_READER_H +#define PX_TREE_READER_H + +#include +#include +#include + +#include "tree.h" + + +class TreeReader { +public: + TreeReader (); + Tree * readTree (const std::string& pb); +}; + + +// hrm why are these not member functions? +int test_tree_filetype (const std::string&); +int test_tree_filetype_stream (std::istream& stri, std::string& retstring); +bool get_nexus_translation_table (std::istream& stri, + std::map * trans, std::string * retstring); +Tree * read_next_tree_from_stream_nexus (std::istream& stri, std::string& retstring, + bool ttexists, std::map * trans, bool * going); +Tree * read_next_tree_from_stream_newick (std::istream& stri, std::string& retstring, + bool * going); + +#endif /* PX_TREE_READER_H */ diff --git a/src/tree_utils.cpp b/src/tree_utils.cpp new file mode 100644 index 0000000..9e778c4 --- /dev/null +++ b/src/tree_utils.cpp @@ -0,0 +1,834 @@ +#include +#include +#include +#include +#include +#include +#include +#include + +#include "node.h" +#include "tree.h" +#include "tree_utils.h" +#include "tree_reader.h" +#include "utils.h" +#include "constants.h" + + +int get_distance_between_two_nodes (Tree * tr, Node * nd1, Node * nd2) { + std::vector vnd; + vnd.push_back(nd1); + vnd.push_back(nd2); + Node * mrca = tr->getMRCA(vnd); + int count = 0; + Node * cur = nd1; + while (cur != mrca) { + cur = cur->getParent(); + count += 1; + } + cur = nd2; + while (cur != mrca) { + cur = cur->getParent(); + count += 1; + } + return count; +} + + +/* + * calculates the branch lengths to the root + */ +double get_length_to_root (Node * n) { + double length = 0; + while (n->getParent() != nullptr) { + length += n->getBL(); + n = n->getParent(); + } + return length; +} + + +/* + * calculate the variance between the lengths to the root and the tips + */ +double get_root_tip_var (Tree * tr) { + unsigned int nc = tr->getExternalNodeCount(); + std::vector paths(static_cast(nc), 0.0); + for (unsigned int i = 0; i < nc; i++) { + paths[static_cast(i)] = get_length_to_root(tr->getExternalNode(i)); + } + double var = v_variance(paths); + return var; +} + + +// assumes annotations are of form: [something] +void remove_annotations (Tree * tr) { + for (unsigned int i = 0; i < tr->getInternalNodeCount(); i++) { + tr->getInternalNode(i)->setComment(""); + } + for (unsigned int i = 0; i < tr->getExternalNodeCount(); i++) { + tr->getExternalNode(i)->setComment(""); + } +} + + +// same as above, but for names +void remove_internal_names(Tree * tr) { + for (unsigned int i = 0; i < tr->getInternalNodeCount(); i++) { + tr->getInternalNode(i)->setName(""); + } +} + + +// NOTE: this is _very_ slow (for large trees) compared to painting the induced tree (pxtrt) +void remove_tips (Tree * tree, std::vector& names, const bool& silent) { + size_t num_names = names.size(); + + // new: note tree rooted status. if originally unrooted, make sure it stays that way on pruning + bool rs = is_rooted(tree); + //std::cout << "rooted tree: " << std::boolalpha << rs << std::endl; + + for (size_t i = 0; i < num_names; i++) { + //std::cout << "Attempting to remove tip '" << names[i] << "'." << std::endl; + Node * m = tree->getExternalNode(names[i]); + if (m != nullptr) { + tree->pruneExternalNode(m); + } else { + if (!silent) { + std::cerr << names[i] << " not in tree" << std::endl; + } + } + //std::cout << "After pruning, tree rootedness: " << std::boolalpha << is_rooted(tree) << std::endl; + + // hrm does this need to be done after _every_ pruning?!? + if (rs != is_rooted(tree)) { + //std::cout << "Unrooting tree..." << std::endl; + // it is possible to go from unrooted to rooted on pruning, but not the other way (i think) + tree->unRoot(); + } + //std::cout << getNewickString(tree) << std::endl; + } +} + + +// tree must be rooted (traces terminate at root node) +// if it is not, root on first name, do trace, and unroot +// this has been tested and works (https://github.com/FePhyFoFum/phyx/issues/74) +Tree * get_induced_tree (Tree * tree, std::vector& names, + const bool& silent) { + bool rooted = is_rooted(tree); + + if (!rooted) { + std::vector og; + og.push_back(names[0]); + reroot(tree, og, silent); + } + + paint_nodes(tree, names, silent); + std::string tracetreenewick = tree->getRoot()->getPaintedNewick(true) + ";"; + TreeReader tr; + Tree * indTree = tr.readTree(tracetreenewick); + deknuckle_tree(indTree); // guaranteed to have knuckles atm + indTree->removeRootEdge(); + + if (!rooted) { + tree->unRoot(); + } + return indTree; +} + + +// check whether the names provided for a monophyletic clade +bool is_monophyletic (Tree * tree, std::vector names, + const bool& skip_missing) { + bool mono = true; + + bool names_good = check_names_against_tree(tree, names); + if (!names_good) { + if (!skip_missing) { + std::cerr << "Exiting." << std::endl; + exit(0); + } else { + std::vector good_names; + for (auto & name : names) { + if (check_name_against_tree(tree, name)) { + good_names.emplace_back(name); + } + } + if (good_names.empty()) { + std::cerr << "Error: no names are present in the tree. Exiting." << std::endl; + exit(1); + } + + names = good_names; + } + } + + Node * nd = tree->getMRCA(names); + int num_leaves = nd->get_num_leaves(); + + if (num_leaves != static_cast(names.size())) { + mono = false; + } + return mono; +} + + +// assumes a rooted tree +void paint_nodes (Tree * tree, std::vector& names, const bool& silent) { + size_t num_names = names.size(); + tree->getRoot()->setPainted(true); // probably do not want this, but mrca is expensive + + for (size_t i = 0; i < num_names; i++) { + Node * m = tree->getNode(names[i]); + if (m != nullptr) { + m->setPainted(true); + Node * cur = m; + while (cur != tree->getRoot()) { + cur = cur->getParent(); + // break early if encountering an existing painted path + if (cur->getPainted()) { + break; + } + cur->setPainted(true); + } + } else { + if (!silent) { + std::cerr << names[i] << " not in tree" << std::endl; + } + } + } +} + + +// treemap: key is focal node, value is vector of adjacent nodes +// both keys and values can be internal or terminal nodes +void create_tree_map_from_rootnode (Tree * tr, std::map >& tree_map) { + + bool debug = true; + + //check if rooted or unrooted + bool rooted = is_rooted(tr); + if (debug) { + std::cout << "tree is rooted: " << std::boolalpha << rooted << std::endl; + } + // internal nodes + for (unsigned int i = 0; i < tr->getInternalNodeCount(); i++) { + Node * tnd = tr->getInternalNode(i); + if (debug) { + std::cout << "Focal node: " << tnd->getName() << std::endl; + } + if (tnd->getParent() == nullptr && rooted) { // root on rooted tree + if (debug) { + std::cout << " Node has no parent, as it is the root" << std::endl; + } + continue; + } + std::vector nds; + for (unsigned int j = 0; j < tnd->getChildCount(); j++) { + nds.push_back(tnd->getChild(j)); + if (debug) { + std::cout << " Adding child node: " + << tnd->getChild(j)->getName() << std::endl; + } + } + if (tnd->getParent() == tr->getRoot() && rooted) { + for (unsigned int j = 0; j < tnd->getParent()->getChildCount(); j++) { + if (tnd->getParent()->getChild(j) != tnd) { + nds.push_back(tnd->getParent()->getChild(j)); + if (debug) { + std::cout << " Adding sibling node: " + << tnd->getChild(j)->getName() << std::endl; + } + } + } + } else { + if (tnd->getParent() != nullptr) { + nds.push_back(tnd->getParent()); + if (debug) { + std::cout << " Adding parent node: " + << tnd->getParent()->getName() << std::endl; + } + } + } + tree_map[tnd] = nds; + } + // terminal nodes + for (unsigned int i = 0; i < tr->getExternalNodeCount(); i++) { + std::vector nds; + Node * tnd = tr->getExternalNode(i); + if (debug) { + std::cout << "Focal node: " << tnd->getName() << std::endl; + } + if (tnd->getParent() == tr->getRoot() && rooted) { + for (unsigned int j = 0; j < tnd->getParent()->getChildCount(); j++) { + if (tnd->getParent()->getChild(j) != tnd) { + nds.push_back(tnd->getParent()->getChild(j)); + if (debug) { + std::cout << " Adding sibling node: " + << tnd->getParent()->getChild(j)->getName() << std::endl; + } + } + } + } else { + nds.push_back(tnd->getParent()); + if (debug) { + std::cout << " Adding parent node: " + << tnd->getParent()->getName() << std::endl; + } + } + tree_map[tnd] = nds; + } + // print map > + if (debug) { + std::cout << std::endl << "TREE MAP:" << std::endl; + for (auto it = tree_map.begin(); + it != tree_map.end(); ++it) { + std::cout << "Node: " << it->first->getName() << std::endl; + std::vector terp = it->second; + for (auto & t : terp) { + std::cout << " " << t->getName() << " "; + } + std::cout << std::endl; + } + } +} + + +// hrm i believe this is fundamentally flawed. start from scratch +void nni_from_tree_map (Tree * tr, std::map >& tree_map) { + bool debug = true; + bool success = false; + if (debug) { + std::cout << "treemap is of size: " << tree_map.size() << std::endl; + } + while (!success) { + auto item = tree_map.begin(); + // this is dumb. instead use: sample_without_replacement(numTotal, numSample) + unsigned int r = random_int_range(0, static_cast(tree_map.size())); + if (debug) { + std::cout << "r1: tree_map.size() = " << tree_map.size() << std::endl; + std::cout << "r1 = " << r << std::endl; + } + + std::advance( item, r ); + Node * first = (*item).first; + + // ack. 'middle' is not necessarily in the middle at all + unsigned int r2 = random_int_range(0, static_cast((*item).second.size())); + + if (debug) { + std::cout << std::endl << "Node first (" << r << "): " << first->getName() << std::endl; + std::cout << " r2: (*item).second.size() = " << (*item).second.size() << std::endl; + std::cout << " r2 = " << r2 << std::endl; + } + + item = tree_map.begin(); + std::advance( item, r2 ); + Node * middle = (*item).first; + if (first == middle) { + if (debug) { + std::cout << "Bailing because first == middle..." << std::endl; + } + continue; + } + + // furthermore, 'second' need not be anywhere near 'first' or 'middle + unsigned int r3 = random_int_range(0, static_cast((*item).second.size())); + + if (debug) { + std::cout << "Node middle (" << r2 << "): " << middle->getName() << std::endl; + std::cout << " r3: (*item).second.size() = " << (*item).second.size() << std::endl; + std::cout << " r3 = " << r2 << std::endl; + } + + item = tree_map.begin(); + std::advance( item, r3 ); + Node * second = (*item).first; + + if (debug) { + std::cout << "Node second (" << r3 << "): " << second->getName() << std::endl; + } + + // TODO: need to fix what happens when the parent is the root, seems to break down + // could also check this above instead of all at once + if (first == second || second == middle || first == tr->getRoot() + || second == tr->getRoot() || first->getParent() == tr->getRoot() + || second->getParent() == tr->getRoot()) { + if (debug) { + std::cout << "Bailing on this combination..." << std::endl; + } + continue; + } + + tr->exchangeNodes(first, second); + tr->processRoot(); + + success = true; + }; +} + + +// moving to own function, as is generally useful +// NOTE: this does not recognize trees where there is a polytomy at the root +bool is_rooted (Tree * tr) { + bool rooted = false; + if (tr->getRoot()->getChildCount() == 2) { + rooted = true; + } + return rooted; +} + + +bool is_binary (Tree * tr) { + bool binary = false; + + unsigned int nintnodes = tr->getInternalNodeCount(); + unsigned int ntips = tr->getExternalNodeCount(); + + if (is_rooted(tr)) { + if (nintnodes == (ntips - 1)) { + binary = true; + } + } else { + if (nintnodes == (ntips - 2)) { + binary = true; + } + } + return binary; +} + + +// sum of edge lengths +double get_tree_length (Tree * tr) { + double length = 0.0; + //Node * root = tr->getRoot(); // not used + unsigned int numNodes = tr->getNodeCount(); + for (unsigned int i = 0; i < numNodes; i++) { + length += tr->getNode(i)->getBL(); + } + return length; +} + + +// NEED THIS?!? probably not. maybe doesn't hurt to have another interface? +bool has_branchlengths (Tree * tr) { + bool gotem = tr->hasEdgeLengths(); + return gotem; +} + + +// simply multiply each edge by some scalar (determined somehow) +void rescale_tree (Tree * tr, const double& scalef) { + unsigned int numNodes = tr->getNodeCount(); + for (unsigned int i = 0; i < numNodes; i++) { + double terp = tr->getNode(i)->getBL(); + if (terp != 0.0) { + double newlength = terp * scalef; + tr->getNode(i)->setBL(newlength); + } + } +} + + +/* Two possible approaches: + * 1) get get_length_to_root for each external node + * - easy, but inefficient + * 2) do a postorder traversal + * - efficient, but harder + * +*/ +// need to check if BLs are present +bool is_ultrametric_paths (Tree * tr) { + bool ultrametric = false; + if (!is_rooted(tr)) { + return ultrametric; + } + if (essentially_equal(get_tree_length(tr), 0.0)) { + return ultrametric; + } + + unsigned int nc = tr->getExternalNodeCount(); + std::vector paths(static_cast(nc), 0.0); + + for (unsigned int i = 0; i < nc; i++) { + paths[static_cast(i)] = get_length_to_root(tr->getExternalNode(i)); + //std::cout << "Path: " << paths[i] << std::endl; + } + // compare against first + /* + if (all_of(paths.begin()+1, paths.end(), bind(essentially_equal, placeholders::_1, paths[0]))) { + ultrametric = true; + } + */ + // this might be better, as it exits earlier on a fail. + /* + vector::iterator it = find_if_not(paths.begin()+1, paths.end(), + bind(essentially_equal, placeholders::_1, paths[0])); + if (it == end(paths)) { + ultrametric = true; + } + */ + + /* + for (unsigned int i = 1; i < paths.size(); i++) { + std::cout << "Comparing " << paths[0] << " to " << paths[i] << " = " + << (paths[0] - paths[i]) << "." << std::endl; + essentially_equal(paths[0], paths[i]); + } + + exit(0); + */ + + // alternate approach: look at variance of paths, compare to EPSILON + double var = v_variance(paths); + if (var < EPSILON) { + ultrametric = true; + // if ultrametric, go ahead and set node heights + Node * root = tr->getRoot(); + set_node_heights(root); + } + + //ultrametric = all_equal(paths); + + return ultrametric; +} + + +// ultrametricity needs to be checked before this +void set_node_heights (Node * node) { + if (node == nullptr) { + return; + } + if (node->getChildCount() > 0) { + std::vector heights; + //bool parentHeight = 0.0; // not used + for (unsigned int i = 0; i < node->getChildCount(); i++) { + set_node_heights(node->getChild(i)); + heights.push_back(node->getChild(i)->getBL() + node->getChild(i)->getHeight()); + } + node->setHeight(heights[0]); + } + if (node->isExternal()) { // tip + node->setHeight(0.0); + } +} + + +// seems to suffer from rounding error (all_equal) +bool is_ultrametric_postorder (Tree * tr) { + bool ultrametric = true; + if (!is_rooted(tr)) { + return ultrametric; + } + if (essentially_equal(get_tree_length(tr), 0.0)) { + return ultrametric; + } + Node * root = tr->getRoot(); + ultrametric = postorder_ultrametricity_check(root, ultrametric); + + return ultrametric; +} + + +// postorder +bool postorder_ultrametricity_check (Node * node, bool& ultrametric) { + if (ultrametric) { + if (node == nullptr) { + return ultrametric; + } + if (node->getChildCount() > 0) { + std::vector heights; + //double parentHeight = 0.0; // not used + for (unsigned int i = 0; i < node->getChildCount(); i++) { + postorder_ultrametricity_check(node->getChild(i), ultrametric); + heights.push_back(node->getChild(i)->getBL() + node->getChild(i)->getHeight()); + } + if (!all_equal(heights)) { + ultrametric = false; + return ultrametric; + } + node->setHeight(heights[0]); + } + if (node->isExternal()) { // tip + node->setHeight(0.0); + } + } + return ultrametric; +} + + +bool check_names_against_tree (Tree * tr, std::vector names) { + bool allgood = true; + for (const auto & name : names) { + //std::cout << "Checking name '" << name << "'." << std::endl; + Node * nd = tr->getExternalNode(name); + if (nd == nullptr) { + std::cerr << "Taxon '" << name << "' not found in tree." << std::endl; + allgood = false; + } + } + return allgood; +} + + +// single name version +bool check_name_against_tree (Tree * tr, const std::string& name) { + bool allgood = true; + Node * nd = tr->getExternalNode(name); + if (nd == nullptr) { + allgood = false; + } + return allgood; +} + + +// if 'silent', don't complain if any outgroups are missing +bool reroot (Tree * tree, const std::vector& outgroups, const bool& silent) { + bool success = false; + std::vector outgr = outgroups; + if (!silent) { + if (!check_names_against_tree(tree, outgr)) { + return false; + } + } else { + outgr = get_names_in_tree(tree, outgr); // this is where things got deleted + if (outgr.empty()) { + return true; + } + } + Node * m = tree->getMRCA(outgr); + if (m == nullptr) { + return false; + } + if (m == tree->getRoot()) { + // check to see if the outgroups are just the children of the root + // if so, then do this + // tree->rootWithRootTips(outgr); // this function does not exist + // if not, then do this + // tree->getInternalMRCA(outgr); // this function is only partly written + + // this can fail if there is a polytomy at the root which includes outgroups + // if it fails, take complement of outgroup, root on that + + //std::cout << "trying to root on ingroup instead" << std::endl; + std::vector ingroup = get_complement_tip_set(tree, outgr); + m = tree->getMRCA(ingroup); + if (m == tree->getRoot()) { + //std::cout << "doh: mrca of ingroup is the same node!" << std::endl; + bool done = false; + // root randomly, then do desired rooting + Node * n = nullptr; + while (!done) { + for (unsigned int i = 0; i < ingroup.size(); i++) { + n = tree->getExternalNode(ingroup[i]); + Node * p = n->getParent(); + if (p != tree->getRoot()) { + //std::cout << "yay! can try with parent of " << ingroup[i] << std::endl; + done = true; + break; + } + //std::cout << "nope: can't use " << ingroup[i] << std::endl; + if (i == (ingroup.size() - 1)) { + done = true; + } + } + } + tree->reRoot(n); + std::string intermediate = getNewickString(tree); + //std::cout << "intermediate result: " << intermediate << std::endl; + //delete tree; // apparently necessary + TreeReader tr; + tree = tr.readTree(intermediate); + m = tree->getMRCA(outgr); + } + } + success = tree->reRoot(m); + return success; +} + + +// return all names that are found in tree +std::vector get_names_in_tree (Tree * tr, + const std::vector& names) { + std::vector matched; + for (const auto & name : names) { + //std::cout << "Checking name '" << names[i] << "'." << std::endl; + Node * nd = tr->getExternalNode(name); + if (nd != nullptr) { + matched.push_back(name); + } + } + return matched; +} + + +std::vector get_complement_tip_set (Tree * tr, + const std::vector& orig_names) { + std::vector comp = get_tip_labels(tr); + std::vector::iterator it; + for (const auto & orig_name : orig_names) { + // remove bad names + it = std::find(comp.begin(), comp.end(), orig_name); + if (it != comp.end()) { + comp.erase(it); + } + } + return comp; +} + + +std::vector get_names_in_tree_regex (Tree * tr, + const std::string& pattern) { + std::vector labels = get_tip_labels(tr); + std::vector matched = regex_search_labels(labels, pattern); + return matched; +} + + +// returns a sorted vector of all terminal labels +std::vector get_tip_labels (Tree * tr) { + unsigned int nc = tr->getExternalNodeCount(); + std::vector labels(static_cast(nc), ""); + for (unsigned int i = 0; i < nc; i++) { + labels[static_cast(i)] = tr->getExternalNode(i)->getName(); + } + sort(labels.begin(), labels.end()); + return labels; +} + + +// remove all knuckles (2-degree nodes) in a tree +void deknuckle_tree (Tree * tree) { + for (unsigned int i = 0; i < tree->getInternalNodeCount(); i++) { + Node * tnd = tree->getInternalNode(i); + if (tnd->isKnuckle()) { + //std::cout << tnd->getName() << " is a KNUCKLE!" << std::endl; + // attempt to remove knuckle + remove_knuckle(tnd); + } + } +} + + +// remove a individual knuckle +void remove_knuckle (Node * node) { + if (node->isKnuckle()) { + double el = node->getBL(); // edge length + Node * cnd = node->getChild(0); + el += cnd->getBL(); + Node * pnd = node->getParent(); + + // delete node, set grandchild as child to grandparent, set el + pnd->addChild(*cnd); + cnd->setBL(el); + pnd->removeChild(*node); + } +} + + +// different version from directly accessing node/getNewick (which this does eventually) +// 1. check presence of edge lengths +// 2. includes semicolon in string +std::string getNewickString (Tree * tree) { + bool bl = tree->hasEdgeLengths(); + std::string phy = tree->getRoot()->getNewick(bl) + ";"; + return phy; +} + + +// same as above, but use Nexus-compliant lanels +std::string getNexusString (Tree * tree) { + bool bl = tree->hasEdgeLengths(); + std::string phy = tree->getRoot()->getTreeStringNexus(bl) + ";"; + return phy; +} + + +// same as above but with objects +std::string getNewickString (Tree * tree, const std::string& obj) { + bool bl = tree->hasEdgeLengths(); + std::string phy = tree->getRoot()->getNewick(bl, obj) + ";"; + return phy; +} + + +// not checking whether rooted in the first place, because registers as not +// e.g. ((((A:0.1,B:0.1):0.1,C:0.2):0.1,D:0.3):0.5); +bool has_root_edge (Tree * tr) { + bool rootEdge = false; + unsigned int nchild = tr->getRoot()->getChildCount(); + //std::cout << "Root has " << nchild << " children." << std::endl; + if (nchild == 1) { + rootEdge = true; + } + return rootEdge; +} + + +std::string double_to_str (double d) { + auto len = static_cast(snprintf(nullptr, 0, "%.16f", d)); + std::string s(len+1, 0); + snprintf(&s[0], len+1, "%.16f", d); + s.pop_back(); + s.erase(s.find_last_not_of('0') + 1, std::string::npos); + if (s.back() == '.') { + s.pop_back(); + } + return s; +} + + +unsigned long int get_num_possible_trees (const unsigned int& n, + const bool& rooted) { + return doublefactorial(2 * (n + static_cast(rooted)) - 5); +} + + +// get all terminal descendants from some node (i.e., does not need to be root) +// uses postorder traversal +void get_terminal_children (Node * node, std::vector& children) { + if (node == nullptr) { + return; + } + if (node->getChildCount() > 0) { + for (unsigned int i = 0; i < node->getChildCount(); i++) { + get_terminal_children(node->getChild(i), children); + } + } + if (node->isExternal()) { + children.push_back(node); + } +} + + +// same as above, but names rather than nodes +void get_terminal_children (Node * node, std::vector& children) { + if (node == nullptr) { + return; + } + if (node->getChildCount() > 0) { + for (unsigned int i = 0; i < node->getChildCount(); i++) { + get_terminal_children(node->getChild(i), children); + } + } + if (node->isExternal()) { + children.push_back(node->getName()); + } +} + + +// like above, but all descendants (not just terminals) +void get_all_descendant_nodes (Node * node, std::vector& children) { + if (node == nullptr) { + return; + } + if (node->getChildCount() > 0) { + for (unsigned int i = 0; i < node->getChildCount(); i++) { + get_terminal_children(node->getChild(i), children); + } + } + children.push_back(node); +} diff --git a/src/tree_utils.h b/src/tree_utils.h new file mode 100644 index 0000000..9219562 --- /dev/null +++ b/src/tree_utils.h @@ -0,0 +1,57 @@ +#ifndef PX_TREE_UTILS_H +#define PX_TREE_UTILS_H + +#include +#include +#include + +class Tree; // forward declaration +class Node; // forward declaration + +class Tree; + +int get_distance_between_two_nodes (Tree * tr, Node * nd1, Node * nd2); +void create_tree_map_from_rootnode (Tree * tr, std::map >&); +void nni_from_tree_map (Tree * tr, std::map >&); +double get_length_to_root (Node * n); +double get_root_tip_var (Tree * tr); +void rescale_tree (Tree * tr, const double& scalef); + +void remove_annotations (Tree * tr); +void remove_internal_names (Tree * tr); +void remove_tips (Tree * tree, std::vector& names, const bool& silent); +Tree * get_induced_tree (Tree * tree, std::vector& names, const bool& silent); +void paint_nodes (Tree * tree, std::vector& names, const bool& silent); + +bool is_monophyletic (Tree * tree, std::vector names, const bool& skip_missing); +bool is_rooted (Tree * tr); +bool is_binary (Tree * tr); +double get_tree_length (Tree * tr); +bool has_branchlengths (Tree * tr); +bool is_ultrametric_paths (Tree * tr); +void set_node_heights (Node * node); +bool is_ultrametric_postorder (Tree * tr); +bool postorder_ultrametricity_check (Node * node, bool& ultrametric); +bool has_root_edge (Tree * tr); + +bool check_names_against_tree (Tree * tr, std::vector names); +bool check_name_against_tree (Tree * tr, const std::string& name); +bool reroot (Tree * tree, const std::vector& outgroups, const bool& silent); +std::vector get_names_in_tree (Tree * tr, const std::vector& names); +std::vector get_complement_tip_set (Tree * tr, const std::vector& orig_names); +std::vector get_names_in_tree_regex (Tree * tr, const std::string& pattern); +std::vector get_tip_labels (Tree * tr); +void deknuckle_tree (Tree * tree); +void remove_knuckle (Node * node); +std::string getNewickString (Tree * tree); +std::string getNexusString (Tree * tree); +std::string getNewickString (Tree * tree, const std::string& obj); + +std::string double_to_str (double d); + +unsigned long int get_num_possible_trees (const unsigned int& n, const bool& rooted); + +void get_terminal_children (Node * node, std::vector& children); +void get_terminal_children (Node * node, std::vector& children); +void get_all_descendant_nodes (Node * node, std::vector& children); +#endif /* PX_TREE_UTILS_H */ diff --git a/src/tscale.cpp b/src/tscale.cpp new file mode 100644 index 0000000..4ab7fb7 --- /dev/null +++ b/src/tscale.cpp @@ -0,0 +1,31 @@ +#include "tscale.h" +#include "tree.h" +#include "utils.h" +#include "tree_utils.h" + + +TScale::TScale ():scalef_(0.0), rootheight_(0.0), rootset_(false) { +} + + +void TScale::set_scalef (const double& scalef) { + scalef_ = scalef; + rootset_ = false; +} + + +void TScale::set_rootheight (const double& rootheight) { + rootheight_ = rootheight; + rootset_ = true; +} + + +void TScale::rescale (Tree * tr) { + if (rootset_) { + // need to figure out scaling factor from original and desired root ages + // ultrametricity check is upstream + double orig_rootheight = tr->getRoot()->getHeight(); + scalef_ = rootheight_ / orig_rootheight; + } + rescale_tree(tr, scalef_); +} diff --git a/src/tscale.h b/src/tscale.h new file mode 100644 index 0000000..7cb7672 --- /dev/null +++ b/src/tscale.h @@ -0,0 +1,19 @@ +#ifndef PX_TSCALE_H +#define PX_TSCALE_H + +class Tree; // forward declaration + +class TScale { +private: + double scalef_; + double rootheight_; + bool rootset_; + +public: + TScale (); + void set_scalef (const double& scalef); + void set_rootheight (const double& rootheight); + void rescale (Tree * tr); +}; + +#endif /* PX_TSCALE_H */ diff --git a/src/upgma.cpp b/src/upgma.cpp new file mode 100644 index 0000000..543ff09 --- /dev/null +++ b/src/upgma.cpp @@ -0,0 +1,214 @@ +#include +#include +#include +#include +#include + +#include "upgma.h" +#include "utils.h" +#include "seq_utils.h" +#include "sequence.h" +#include "seq_reader.h" +#include "node.h" +#include "tree.h" +#include "tree_utils.h" + + +UPGMA::UPGMA (std::istream* pios):num_taxa_(0), num_char_(0), newickstring_(""), + tree_(nullptr) { + std::string alphaName; // not used, but required by reader + seqs_ = ingest_alignment(pios, alphaName); + num_taxa_ = static_cast(seqs_.size()); + num_char_ = static_cast(seqs_[0].get_length()); + + // check that it is aligned (doesn't make sense otherwise) + if (!is_aligned(seqs_)) { + std::cerr << "Error: sequences are not aligned. Exiting." << std::endl; + exit(0); + } + names_ = collect_names(seqs_); + full_distmatrix_ = build_matrix(); +} + + +std::vector< std::vector > UPGMA::build_matrix () { + // 1) skip self comparisons + // 2) only calculate one half of matrix (i.e., no duplicate calcs) + auto nt = static_cast(num_taxa_); + std::vector< std::vector > distances(nt, + std::vector(nt, 0.0)); + + double tempScore = 0.0; + for (size_t i = 0; i < nt; i++) { + std::string seq1 = seqs_[i].get_sequence(); + for (size_t j = (i + 1); j < nt; j++) { + std::string seq2 = seqs_[j].get_sequence(); + // get distance + tempScore = static_cast(calc_hamming_dist(seq1, seq2)); + // put scale in terms of number of sites. original version did not do this + tempScore /= static_cast(num_char_); + // put in both top and bottom of matrix, even though only top is used + distances[i][j] = distances[j][i] = tempScore; + } + } + + // just for debugging + /* + std::cout << "\t"; + for (unsigned int i = 0; i < names_.size(); i++) { + std::cout << names_[i] << "\t"; + } + std::cout << std::endl; + for (int i = 0; i < num_taxa_; i++) { + std::cout << names_[i] << "\t"; + for (int j = 0; j < num_taxa_; j++) { + std::cout << distances[i][j] << "\t"; + } + std::cout << std::endl; + } + */ + + return distances; +} + + +// find smallest pairwise distance +// will always find this on the top half of the matrix i.e., mini1 < mini2 +double UPGMA::get_smallest_distance (const std::vector< std::vector >& dmatrix, + unsigned long& mini1, unsigned long& mini2) { + // super large value + double minD = 99999999999.99; + size_t numseqs = dmatrix.size(); + for (size_t i = 0; i < (numseqs - 1); i++) { + auto idx = static_cast(std::min_element(dmatrix[i].begin() + (i + 1), + dmatrix[i].end()) - dmatrix[i].begin()); + if (dmatrix[i][idx] < minD) { + minD = dmatrix[i][idx]; + mini1 = i; + mini2 = idx; + } + } + return minD; +} + + +void UPGMA::construct_tree () { + // location of minimum distance (top half) + unsigned long ind1 = 0; + unsigned long ind2 = 0; + + // initialize + std::vector< std::vector > dMatrix = full_distmatrix_; + Node * anc = nullptr; // new node, ancestor of 2 clusters + Node * left = nullptr; + Node * right = nullptr; + auto nt = static_cast(num_taxa_); + size_t numClusters = nt; + + // keep list of nodes left to be clustered. initially all terminal nodes + std::vector nodes(nt); + for (size_t i = 0; i < nt; i++) { + auto * nd = new Node(); + nd->setName(names_[i]); + nd->setHeight(0.0); + nodes[i] = nd; + } + + while (numClusters > 1) { + // 1. get smallest distance present in the matrix + double minD = get_smallest_distance(dMatrix, ind1, ind2); + left = nodes[ind1]; + right = nodes[ind2]; + + // 2. create new ancestor node + anc = new Node(); + + // 3. add nodes in new cluster above as children to new ancestor + anc->addChild(*left); // addChild calls setParent + anc->addChild(*right); + + // 4. compute edgelengths: half of the distance + // edgelengths must subtract the existing height + double newHeight = 0.5 * minD; + left->setBL(newHeight - left->getHeight()); + right->setBL(newHeight - right->getHeight()); + + // make sure to set the height of anc for the next iteration to use + anc->setHeight(newHeight); + + // 5. compute new distance matrix (1 fewer rows & columns) + // new distances are proportional averages (size of clusters) + // new cluster is placed first (row & column) + std::vector avdists(numClusters, 0.0); + double Lweight = left->isExternal() ? 1.0 : static_cast(left->getChildCount()); + double Rweight = right->isExternal() ? 1.0 : static_cast(right->getChildCount()); + for (unsigned long i = 0; i < numClusters; i++) { + avdists[i] = ((dMatrix[ind1][i] * Lweight) + (dMatrix[ind2][i] * Rweight)) / (Lweight + Rweight); + } + + numClusters--; + std::vector< std::vector > newDistances(numClusters, + std::vector(numClusters, 0.0)); + + // put in distances to new clusters first + double tempDist = 0.0; + unsigned long count = 0; + for (size_t i = 0; i < nodes.size(); i++) { + if (i != ind1 && i != ind2) { + count++; + tempDist = avdists[i]; + newDistances[0][count] = tempDist; + newDistances[count][0] = tempDist; + } + } + + // now, fill in remaining + unsigned long icount = 1; + auto ndsize = nodes.size(); + for (size_t i = 0; i < ndsize; i++) { + if (i != ind1 && i != ind2) { + size_t jcount = 1; + for (size_t j = 0; j < ndsize; j++) { + if (j != ind1 && j != ind2) { + newDistances[icount][jcount] = dMatrix[i][j]; + newDistances[jcount][icount] = dMatrix[i][j]; + jcount++; + } + } + icount++; + } + } + + // replace distance matrix + dMatrix = newDistances; + + // 6. finally, update node vector (1 shorter). new node always goes first) + std::vector newNodes(numClusters); + newNodes[0] = anc; + unsigned long counter = 1; + for (unsigned long i = 0; i < ndsize; i++) { + if (i != ind1 && i != ind2) { + newNodes[counter] = nodes[i]; + counter++; + } + } + // replace node vector + nodes = newNodes; + } + tree_ = new Tree(anc); + tree_->setEdgeLengthsPresent(true); // used by newick writer +} + + +std::string UPGMA::get_newick () { + if (newickstring_.empty()) { + construct_tree(); + } + newickstring_ = getNewickString(tree_); + return newickstring_; +} + + +std::vector< std::vector > UPGMA::get_matrix () const { + return full_distmatrix_; +} diff --git a/src/upgma.h b/src/upgma.h new file mode 100644 index 0000000..b231c75 --- /dev/null +++ b/src/upgma.h @@ -0,0 +1,36 @@ +#ifndef PX_UPGMA_H +#define PX_UPGMA_H + +#include +#include +#include + +#include "sequence.h" + +class Tree; // forward declaration + + +class UPGMA { +private: + int num_taxa_; + int num_char_; + std::string newickstring_; + std::vector names_; + std::vector seqs_; + std::vector< std::vector > full_distmatrix_; + Tree* tree_; + + void update_tree (std::string& newname, std::vector& names, + std::vector< std::vector >& newmatrix); + std::vector< std::vector > build_matrix (); + double get_smallest_distance (const std::vector< std::vector >& dmatrix, + unsigned long& mini1, unsigned long& mini2); + void construct_tree (); + +public: + explicit UPGMA (std::istream* pios); + std::vector< std::vector > get_matrix () const; + std::string get_newick (); +}; + +#endif /* PX_UPGMA_H */ diff --git a/src/utils.cpp b/src/utils.cpp new file mode 100644 index 0000000..9099983 --- /dev/null +++ b/src/utils.cpp @@ -0,0 +1,873 @@ +#include +#include +#include +#include +#include +#include +#include +#include +#include +#include +#include +#include +#include +#include +#include + +#include "utils.h" +#include "superdouble.h" +#include "constants.h" + + +// TODO: use const where possible + +// set threshold. should maybe use superdouble. +//extern const double EPSILON; // moved to constants.h + +// other stuff i am playing around with. temporary. +/* +#define MEPSILON numeric_limits::min() // 2.22507e-308 +#define GEPSILON numeric_limits::round_error() // 0.5 +#define FLEPSILON numeric_limits::epsilon() // 1.19209e-07 +#define MANTISSA std::numeric_limits::digits10 // 15 +#define FLAMANTISSA std::numeric_limits::digits10 // 6 +#define double THRESH = e-10; +*/ + + +void check_file_exists (const std::string& filename) { + std::ifstream infile(filename); + if (!infile.good()) { + std::cerr << "Error: file '" << filename << "' not found. Exiting." << std::endl; + exit(0); + } +} + + +void check_inout_streams_identical (char * in, char * out) { + if (in == out) { + std::cerr << "Error: input and output streams (files) must differ. Exiting." << std::endl; + exit(0); + } +} + + +// catch exception (atoi does not do this) +// arg is passed for error messages only +int string_to_int (const std::string& in, const std::string& arg) { + int res = 0; + try { + res = std::stoi(in); + } catch (const std::invalid_argument& ia) { + std::cerr << "Error: invalid argument for " << arg + << "; expecting int (" << ia.what() << "). Exiting." << std::endl; + exit(0); + } + return res; +} + + +long int string_to_long_int (const std::string& in, const std::string& arg) { + long int res = 0; + try { + res = std::stol(in); + } catch (const std::invalid_argument& ia) { + std::cerr << "Error: invalid argument for " << arg + << "; expecting long int (" << ia.what() << "). Exiting." << std::endl; + exit(0); + } + return res; +} + + +// catch exception (atof does not do this) +float string_to_float (const std::string& in, const std::string& arg) { + float res = 0; + try { + res = std::stof(in); + } catch (const std::invalid_argument& ia) { + std::cerr << "Error: invalid argument for " << arg + << "; expecting float (" << ia.what() << "). Exiting." << std::endl; + exit(0); + } + return res; +} + + +double string_to_double (const std::string& in, const std::string& arg) { + double res = 0; + try { + res = std::stod(in); + } catch (const std::invalid_argument& ia) { + std::cerr << "Error: invalid argument for " << arg + << "; expecting double (" << ia.what() << "). Exiting." << std::endl; + exit(0); + } + return res; +} + + +// convenience func. returns copy so original can still be used +std::string string_to_upper (const std::string& instr) { + std::string outstr = instr; + std::transform(outstr.begin(), outstr.end(), outstr.begin(), ::toupper); + return outstr; +} + + +// and the other one +std::string string_to_lower (const std::string& instr) { + std::string outstr = instr; + std::transform(outstr.begin(), outstr.end(), outstr.begin(), ::tolower); + return outstr; +} + + +void tokenize (const std::string& str, std::vector& tokens, + const std::string& delimiters) { + // Skip delimiters at beginning. + std::string::size_type lastPos = str.find_first_not_of(delimiters, 0); + // Find first "non-delimiter". + std::string::size_type pos = str.find_first_of(delimiters, lastPos); + + while (std::string::npos != pos || std::string::npos != lastPos) { + // Found a token, add it to the vector. + tokens.push_back(str.substr(lastPos, pos - lastPos)); + // Skip delimiters. Note the "not_of" + lastPos = str.find_first_not_of(delimiters, pos); + // Find next "non-delimiter" + pos = str.find_first_of(delimiters, lastPos); + } +} + + +// works a little differently than above; don't need to trim spaces +// assumes delimiter is some form of whitespace +std::vector tokenize (const std::string& input) { + std::vector tokens; + std::string temp; + std::istringstream str(input); + while (str >> temp) { + tokens.push_back(temp); + } + return tokens; +} + + +bool is_number (const std::string& s) { + std::string::const_iterator it = s.begin(); + while (it != s.end() && (std::isdigit(*it) != 0)) { + ++it; + } + return !s.empty() && it == s.end(); +} + + +// get the longest label. for printing/formatting purposes +unsigned int get_longest_label (std::vector& labels) { + unsigned int longest_label_ = 0; + for (auto & label : labels) { + auto cur_len = static_cast(label.size()); + if (cur_len > longest_label_) { + longest_label_ = cur_len; + } + } + return longest_label_; +} + + +// properly read in unix, old mac, and windows line endings +// pilfered from: https://stackoverflow.com/a/6089413/3389183 +std::istream& getline_safe(std::istream& is, std::string& t) { + t.clear(); + + // The characters in the stream are read one-by-one using a std::streambuf. + // That is faster than reading them one-by-one using the std::istream. + // Code that uses streambuf this way must be guarded by a sentry object. + // The sentry object performs various tasks, + // such as thread synchronization and updating the stream state. + + std::istream::sentry se(is, true); + std::streambuf* sb = is.rdbuf(); + + for (;;) { + int c = sb->sbumpc(); + switch (c) { + case '\n': + return is; + case '\r': + if (sb->sgetc() == '\n') { + sb->sbumpc(); + } + return is; + case std::streambuf::traits_type::eof(): + // Also handle the case when the last line has no line ending + if (t.empty()) { + is.setstate(std::ios::eofbit); + } + return is; + default: + t += static_cast(c); + } + } +} + + +// not currently used +unsigned int factorial (unsigned int n) { + return (n == 0 || n == 1) ? 1 : factorial(n - 1) * n; +} + + +// used for counting trees +unsigned long int doublefactorial (unsigned int n) { + return (n == 0 || n == 1) ? 1 : doublefactorial(n - 2) * n; +} + + +// higher resolution than time( nullptr ); +unsigned int get_clock_seed () { + return (static_cast(std::chrono::high_resolution_clock::now().time_since_epoch().count())); +} + + +void trim_spaces (std::string& str) { + // Trim Both leading and trailing spaces + // Find the first character position after excluding leading blank spaces + size_t startpos = str.find_first_not_of(" \t\r\n"); + // Find the first character position from reverse af + size_t endpos = str.find_last_not_of(" \t\r\n"); + + // if all spaces or empty return an empty string + if (std::string::npos == startpos || std::string::npos == endpos) { + str = ""; + } else { + str = str.substr(startpos, endpos - startpos + 1); + } + /* + // Code for Trim Leading Spaces only + // Find the first character position after excluding leading blank spaces + size_t startpos = str.find_first_not_of(\t); + if (string::npos != startpos) + str = str.substr( startpos ); + */ + + /* + // Code for Trim trailing Spaces only + size_t endpos = str.find_last_not_of(\t); // Find the first character position from reverse af + if (string::npos != endpos) + str = str.substr(0, endpos + 1); + */ +} + + +bool check_comment_line (const std::string& line) { + bool comment = false; + std::string trimmed = line; + trim_spaces(trimmed); // get rid of leading spaces + if (trimmed[0] == '#' || trimmed[0] == '[') { + comment = true; + } + return comment; +} + + +// used by pxstrec +std::vector > processRateMatrixConfigFile (const std::string& filename, + int numstates) { + auto ns = static_cast(numstates); + std::vector cols(ns, 1); + std::vector > ratematrix; + ratematrix = std::vector > (ns, cols); + //read file + std::ifstream ifs(filename.c_str()); + std::string line; + int fromarea = 0; + while (getline_safe(ifs, line)) { + if (line.size() > 3) { + std::vector tokens; + std::string del(" ,\t"); + tokens.clear(); + tokenize(line, tokens, del); + for (auto & tk : tokens) { + trim_spaces(tk); // this will never be used, as it was split on whitespace + } + for (unsigned int j = 0; j < tokens.size(); j++) { + ratematrix[static_cast(fromarea)][j] = std::atof(tokens[j].c_str()); + } + if (fromarea < numstates-1) { + fromarea += 1; + } else { + fromarea = 0; + } + } + } + ifs.close(); + return ratematrix; +} + + +// NOTE: this assumes that srand have been seeded previously +// e.g., srand(get_clock_seed()); +unsigned int random_int_range (const unsigned int& min, const unsigned int& max) { + return min + (rand() % static_cast(max - min + 1)); +} + + +// given numTotal sites, sample numSample without replacement between 0 -> (numTotal-1) +// ok, this is pretty sweet, if i do say so myself +std::vector sample_without_replacement (const unsigned int& numTotal, + const unsigned int& numSample) { + std::vector randsites (static_cast(numSample)); // numchar zero-initialized elements + std::vector allsites (static_cast(numTotal)); + std::iota(allsites.begin(), allsites.end(), 0); // generate sequence 0, 1, 2..., n-1 + + for (unsigned int i = 0; i < numSample; i++) { + unsigned int randNum = random_int_range(i, (numTotal - 1u)); + // swap, so don't have to worry about multiple hits + std::swap(allsites[static_cast(i)], allsites[static_cast(randNum)]); + randsites[static_cast(i)] = allsites[static_cast(i)]; + } + return randsites; +} + + +// arg below is always '?'. besides, getopt prints errors to sterr +void print_error (char * pname) { + // std::cout << pname <<": invalid option -- '" << arg << "'" << std::endl; + std::cout << "Try `" << pname << " --help' for more information." << std::endl; +} + + +bool test_logical (std::vector& matA, std::vector& matB) { + bool test = false; + int match1 = 0; + unsigned int numdiffs = 0; + for (unsigned int i = 0; i < matA.size(); i++) { + if (((matA[i] == 1) && (matB[i] == 1))) { + match1 += 1; + } else { + numdiffs += 1; + } + } + //had to change because of negatives + if ((match1 != sum(matA)) && (match1 != sum(matB))) { + if (numdiffs != matA.size()) { + test = true; + } + } + return test; +} + + +/* + * edgewise added because we have to check the reverse if not rooted + * + * TODO : should probably look at this + */ +bool test_logical (std::vector& matA, std::vector& matB, bool edgewise) { + bool test = false; + int match1 = 0; + unsigned int numdiffs = 0; + for (unsigned int i = 0; i < matA.size(); i++) { + if (((matA[i] == 1) && (matB[i] == 1))) { + match1 += 1; + } else { + numdiffs += 1; + } + } + //had to change because of negatives + if ((match1 != sum(matA)) && (match1 != sum(matB))) { + if (numdiffs != matA.size()) { + if (edgewise) { + int match2 = 0; + unsigned int numdiffs2 = 0; + for (unsigned int i = 0; i < matA.size(); i++) { + if (((matA[i] == 1) && (matB[i] == 0))) { + match2 += 1; + } else { + numdiffs2 += 1; + } + } + if ((match2 != sum(matA)) && (match2 != count_zeros(matB))) { + if (numdiffs2 != matA.size()) { + test = true; + } + } + } else { + test = true; + } + } + } + return test; +} + + +//------------------------------------------------------------------------// +// simple math on vectors + +int sum_matrix_col (std::vector >& matrix, unsigned int col) { + int x = 0; + for (auto & mati : matrix) { + x += mati[static_cast(col)]; + } + return x; +} + + +// not used +int sum_matrix_col_negs (std::vector >& matrix, int col) { + int x = 0; + for (auto & mati : matrix) { + if (mati[static_cast(col)] < 0) { + x += mati[static_cast(col)]; + } + } + return x; +} + + +// NOTE: this partially rearranges elements, so make a copy if order is important +double v_median (std::vector& in) { + int n = static_cast(in.size()) / 2; + std::nth_element(in.begin(), in.begin()+n, in.end()); + double median = in[static_cast(n)]; + + if (n % 2 == 0) { // if the length is even + auto max_it = std::max_element(in.begin(), in.begin()+n); + median = (*max_it + median) / 2.0; + } + return median; +} + + +// should make this a templated function +double v_mean (std::vector& in) { + return sum(in) / static_cast(in.size()); +} + + +// if you want one, prolly want the other too +void v_mean_variance (std::vector& in, double& mn, double& varr) { + auto n = static_cast(in.size()); + mn = sum(in) / n; + std::vector diff(in.size()); + std::transform(in.begin(), in.end(), diff.begin(), + std::bind2nd(std::minus(), mn)); + double sq_sum = std::inner_product(diff.begin(), diff.end(), diff.begin(), 0.0); + varr = sq_sum / n; +} + + +double v_variance (std::vector& in) { + auto n = static_cast(in.size()); + double meann = sum(in) / n; + std::vector diff(static_cast(n)); + std::transform(in.begin(), in.end(), diff.begin(), + std::bind2nd(std::minus(), meann)); + double sq_sum = std::inner_product(diff.begin(), diff.end(), diff.begin(), 0.0); + double var = sq_sum / n; + return var; +} + + +double sum (std::vector& in) { + return std::accumulate(in.begin(), in.end(), 0.0); +} + + +int sum (std::vector& in) { + return std::accumulate(in.begin(), in.end(), 0); +} + + +// hrm look into templated function +unsigned int sum (std::vector& in) { + return static_cast(std::accumulate(in.begin(), in.end(), 0)); +} + + +std::vector string_v_to_double_v (const std::vector& in) { + std::vector out(in.size()); + std::transform(in.begin(), in.end(), out.begin(), [](const std::string& val) {return std::stod(val);}); + return out; +} + + +int count_zeros (std::vector& in) { + int x = 0; + for (int i : in) { + if (i == 0) { + x += 1; + } + } + return x; +} + + +Superdouble calculate_vector_Superdouble_sum (std::vector& in) { + Superdouble sum(0); + for (const auto & i : in) { + sum += i; + // std::cout << i << " sum:" << sum << std::endl; + } + // std::cout << "endsum:" << sum << std::endl; + return sum; +} + + +// add element i in vec1 to element i in vec2 +std::vector sum (std::vector& vec1, std::vector& vec2) { + // bail if sequences are of different lengths. + if (vec1.size() != vec2.size()) { + throw std::invalid_argument( + "Vectors must be of equal length" + ); + } + std::vector res = vec1; + std::transform(res.begin(), res.end(), vec2.begin(), res.begin(), std::plus<>()); + return res; +} + + +std::vector average_vectors_elementwise (std::vector& vec1, + std::vector& vec2) { + // bail if sequences are of different lengths. + if (vec1.size() != vec2.size()) { + throw std::invalid_argument( + "Vectors must be of equal length" + ); + } + std::vector res = sum_vectors_elementwise(vec1, vec2); + std::transform(res.begin(), res.end(), res.begin(), std::bind1st(std::multiplies(), 0.5)); + + return res; +} + +//------------------------------------------------------------------------// + + +std::string get_string_vector(std::vector& sts) { + std::string rets; + for (const auto & st : sts) { + rets += st + " "; + } + return rets; +} + + +std::string get_string_vector(std::vector& sts) { + std::string rets; + for (int st : sts) { + rets += std::to_string(st) + " "; + } + return rets; +} + + +// replace all occurrences of origSubStr to replSubStr +void replace_all (std::string& str, const std::string& origSubStr, + const std::string& replSubStr) { + if (origSubStr.empty()) { + return; + } + size_t start_pos = 0; + while ((start_pos = str.find(origSubStr, start_pos)) != std::string::npos) { + str.replace(start_pos, origSubStr.length(), replSubStr); + start_pos += replSubStr.length(); + } +} + + +// similar to above, but here we replace any 'bad' characters present in origSubStr +// by the replacement. each bad character will be replaced (i.e. contiguous +// characters will each be replaced). replacement string may be longer than what +// is being replaced (a single character). +// e.g. we might replace each chars in "()[]:;" by "_" +void replace_each (std::string& str, const std::string& badChars, + const std::string& replSubStr) { + if (badChars.empty()) { + return; + } + size_t start_pos = str.find_first_of(badChars); + while (start_pos != std::string::npos) { + str.replace(start_pos, 1, replSubStr); + start_pos = str.find_first_of(badChars, start_pos+replSubStr.length()); + } +} + +/*------------------------------------------------------------------------/ + + Phun with phormats! + Both Nexus and newick have rules regarding punctuation and the treatment + of whitespace characters. + Of course they are not equivalent (that would be too easy)... + + Newick rules are given here: http://evolution.genetics.washington.edu/phylip/newick_doc.html + Unquoted labels may not contain blanks, parentheses, square brackets, + single_quotes, colons, semicolons, or commas. + + Nexus rules are given in Maddison et al. 1997. Syst. Biol. 46 (4): 590-621 doi: 10.1093/sysbio/46.4.590 + Nexus punctuation characters: () [] {} / \, ; := * ' "` + - <> + + Commonalities: + 1) if a token contains punctuation it needs to be surrounded by single quotes + 2) single quotes within a token are replaced by doubled single quotes + e.g. the token 'John's' should be represented as 'John''s' + 3) underscores in unquoted tokens should be treated as blank spaces ('dark characters') + e.g. B._zephyrum is equivalent to 'B. zephyrum' + + Where they diverge (punctuation in Nexus but not newick): + +/-----------------------------------------------------------------------*/ +//const std::string nexus_punct = "()[]{}/\\,;:=*\'\"`+-<>"; // escaped string literal +const std::string nexus_punct = R"(()[]{}/\,;:=*'"`+-<>)"; // raw string literal +const std::string newick_punct = "()[]\':;,"; + +// given a line that begins with [, keep reading until a line where last char is ] (i.e., end of comment) +// occurs in BOTH tree and alignment files (hence, location) +// NOTE: returns the end comment line (so reader will need to read in next valid line) +void process_nexus_comment (std::istream& stri, std::string& tline) { + std::string terp = tline; + trim_spaces(terp); + // check single-line comment + if (terp.back() == ']') { + //std::cout << "single-line comment!" << std::endl; + return; + } + // if not, dealing with a multi-line comment + while (true) { + getline_safe(stri, terp); + trim_spaces(terp); + if (!terp.empty()) { + if (terp.back() == ']') { + //std::cout << "found end of multi-line comment" << std::endl; + return; + } + } + } +} + + +bool check_nexus_comment (std::string line) { + bool comment = false; + trim_spaces(line); + if (line[0] == '[') { + comment = true; + } + return comment; +} + + +// get a taxon label that is newick-compliant +// this is not currently used, but probably should be +std::string get_valid_newick_label (const std::string& inLabel) { + std::string outLabel = inLabel; + + // if surrounded by single quotes already, assume cool + if (outLabel[0] == '\'' && outLabel[outLabel.size() - 1] == '\'') { + return outLabel; + } + // does the label require quotes? + if (outLabel.find_first_of(newick_punct) != std::string::npos) { + quotify_label(outLabel); + } else if (outLabel.find_first_of(' ') != std::string::npos) { + std::replace(outLabel.begin(), outLabel.end(), ' ', '_'); + } + return outLabel; +} + + +// get a taxon label that is Nexus-compliant +std::string get_valid_nexus_label (const std::string& inLabel) { + std::string outLabel = inLabel; + + // if surrounded by single quotes already, assume cool + if (outLabel[0] == '\'' && outLabel[outLabel.size() - 1] == '\'') { + return outLabel; + } + // does the label require quotes? + if (outLabel.find_first_of(nexus_punct) != std::string::npos) { + quotify_label(outLabel); + } else if (outLabel.find_first_of(' ') != std::string::npos) { + std::replace(outLabel.begin(), outLabel.end(), ' ', '_'); + } + return outLabel; +} + + +// alters the label, but *should* open in all programs +// replace all illegal characters with an underscore +std::string get_safe_taxon_label (const std::string& inLabel) { + std::string outLabel = inLabel; + replace_each(outLabel, nexus_punct, "_"); + return outLabel; +} + + +// got an invalid token. replace internal quotes and underscores, surround by quotes +void quotify_label (std::string& token) { + // replace internal quotes + replace_all(token, "'", "''"); + + // replace underscores + std::replace(token.begin(), token.end(), '_', ' '); + + // add outer quotes + token = "'" + token + "'"; +} + + +//------------------------------------------------------------------------// + +// Hamming (edit) distance +unsigned int calc_hamming_dist (const std::string& s1, const std::string& s2) { + + if (s1 == s2) { + return 0; + } + + // bail if sequences are of different lengths. should be caught earlier than this + if (s1.size() != s2.size()) { + throw std::invalid_argument( + "Hamming distances are only defined for strings of equal length." + ); + } + + unsigned int startv = 0; + + return std::inner_product( + s1.begin(), s1.end(), s2.begin(), startv, std::plus<>(), + std::not2(std::equal_to()) + ); +} + + +double logn (double x, double base) { + return log10(x)/log10(base); +} + + +//------------------------------------------------------------------------// +// equality checks // + +// check if 2 doubles are equal within some tolerance. +bool essentially_equal_doubles (double a, double b) { + + /* + std::cout << "fabs(a - b) = " << fabs(a - b) << std::endl; + std::cout << "ApproximatelyEqual: " + << (fabs(a - b) <= ( (fabs(a) < fabs(b) ? fabs(b) : fabs(a)) * EPSILON)) << std::endl; + std::cout << "EssentiallyEqual: " + << (fabs(a - b) <= ( (fabs(a) > fabs(b) ? fabs(b) : fabs(a)) * EPSILON)) << std::endl; + */ + + // not used + /* + if (fabs(a - b) <= std::max(EPSILON, EPSILON * std::max(std::abs(a), std::abs(b)))) { + equal = true; + } + */ + bool equal = (std::abs(a - b) <= ( (std::abs(a) > std::abs(b) ? std::abs(b) : std::abs(a)) * EPSILON)); + + return equal; +} + + +bool all_equal (std::vector vals) { + bool equal = false; + auto it = std::find_if_not(vals.begin()+1, vals.end(), + std::bind(essentially_equal_doubles, std::placeholders::_1, vals[0])); + if (it == end(vals)) { + equal = true; + } + return equal; +} + + +bool all_equal (std::vector vals) { + bool equal = false; + if (std::all_of(vals.begin(), vals.end(), [&] (int i) {return i == vals[0];})) { + equal = true; + } + return equal; +} + + +bool all_equal (std::vector vals) { + bool equal = false; + if (std::all_of(vals.begin(), vals.end(), [&] (unsigned int i) {return i == vals[0];})) { + equal = true; + } + return equal; +} + + +bool check_for_input_to_stream () { + bool ret = true; + struct pollfd pfd = { STDIN_FILENO, POLLIN, 0 }; + int ret_poll = 0; + ret_poll = poll(&pfd, 1, 500); + if (ret_poll == 0) { + ret = false; + } + return ret; +} + + +// not using right now +// return elements in a *not* found in b +std::vector get_complement (std::vector& a, std::vector& b) { + std::vector comp; + for (const auto & i : a) { + if (find(b.begin(), b.end(), i) == b.end()) { + comp.push_back(i); + } + } + return comp; +} + + +// peek at the next line in the stream +std::string peek_line (std::istream& pios) { + std::string nextLine; + // get current position + std::streampos spt = pios.tellg(); + // read in next line + getline_safe(pios, nextLine); + // return to the original position in the stream + pios.seekg(spt, std::ios_base::beg); + return nextLine; +} + + +// same as above, except read in the next n lines +std::vector peek_lines (std::istream& pios, const int& n) { + std::vector peekedLines; + std::string nextLine; + // get current position + std::streampos spt = pios.tellg(); + // read in the lines + for (int i = 0; i < n; i++) { + getline_safe(pios, nextLine); + peekedLines.push_back(nextLine); + } + // return to the original position in the stream + pios.seekg(spt, std::ios_base::beg); + return peekedLines; +} + + +// given a list of names and a regex pattern, return the list of names that contain the pattern +std::vector regex_search_labels (const std::vector& names, + const std::string& pattern) { + std::vector results; + const std::regex regexp(pattern); + for (const auto & name : names) { + //std::cout << name << ": " << std::regex_search(name, regexp) << std::endl; + if (std::regex_search(name, regexp)) { + results.push_back(name); + } + } + return results; +} diff --git a/src/utils.h b/src/utils.h new file mode 100644 index 0000000..917ad25 --- /dev/null +++ b/src/utils.h @@ -0,0 +1,193 @@ +#ifndef PX_UTILS_H +#define PX_UTILS_H + +#include +#include +#include +#include +#include +#include +#include + +#include "superdouble.h" + + +// TODO organize this stuff! + +void check_file_exists (const std::string& filename); +void check_inout_streams_identical (char * in, char * out); +int string_to_int (const std::string& in, const std::string& arg); +long int string_to_long_int (const std::string& in, const std::string& arg); + +std::string string_to_upper (const std::string& instr); +std::string string_to_lower (const std::string& instr); +float string_to_float (const std::string& in, const std::string& arg); +double string_to_double (const std::string& in, const std::string& arg); + +void tokenize (const std::string& str, std::vector& tokens, + const std::string& delimiters = " "); +std::vector tokenize (const std::string& input); +void trim_spaces (std::string& str); +bool check_comment_line (const std::string& line); +bool is_number (const std::string&); +unsigned int get_longest_label (std::vector& labels); + +std::istream& getline_safe(std::istream& is, std::string& t); + +unsigned int factorial (unsigned int n); +unsigned long int doublefactorial (unsigned int n); + +unsigned int get_clock_seed (); + +// template version. pass result vector as arg; will delete anything already in res +template void parse_comma_list (std::string& str, std::vector& res) { + std::stringstream ss(str); + T i; + res.clear(); + while (ss >> i) { + res.push_back(i); + bool done = false; + while (!done) { // shouldn't be any spaces, but let's be safe + if (ss.peek() == ' ' || ss.peek() == ',') { + ss.ignore(); + } else { + done = true; + } + } + } +} + +//------------------------------------------------------------------------// +// do stuff over vectors +double sum (std::vector& in); +int sum (std::vector& in); +unsigned int sum (std::vector& in); + +int count_zeros (std::vector& in); +Superdouble calculate_vector_Superdouble_sum (std::vector& in); + +double v_median (std::vector& in); +double v_mean (std::vector& in); +void v_mean_variance (std::vector& in, double& mn, double& varr); +double v_variance (std::vector& in); +std::vector sum (std::vector& vec1, std::vector& vec2); + +template std::vector sum_vectors_elementwise (std::vector& vec1, std::vector& vec2) { + // bail if sequences are of different lengths. + if (vec1.size() != vec2.size()) { + throw std::invalid_argument( + "Vectors must be of equal length" + ); + } + std::vector res = vec1; + std::transform(res.begin(), res.end(), vec2.begin(), res.begin(), std::plus()); + return res; +} + +std::vector average_vectors_elementwise (std::vector& vec1, std::vector& vec2); + +// get rid of any duplicate elements +// assumes number of elements is not huge (otherwise a set might be better) +template std::vector get_unique_elements (std::vector vec) { + sort(vec.begin(), vec.end()); + vec.erase(unique(vec.begin(), vec.end()), vec.end()); + return vec; +} + +// find elements present in the first vector but not the second. does not do symmetric search +template std::vector in_first_not_second (std::vector firstv, std::vector secondv) { + std::vector res(firstv.size()); + std::sort(firstv.begin(), firstv.end()); + std::sort(secondv.begin(), secondv.end()); + + typename std::vector::iterator it; + it = std::set_difference(firstv.begin(), firstv.end(), secondv.begin(), secondv.end(), res.begin()); + res.resize(static_cast(it-res.begin())); + + //std::remove_copy_if(firstv.begin(), firstv.end(), std::back_inserter(res), + // [&secondv](const T& arg) {return (std::find(secondv.begin(), secondv.end(), arg) != secondv.end());}); + return res; +} + +std::vector string_v_to_double_v (const std::vector& in); + +//------------------------------------------------------------------------// + +std::vector > processRateMatrixConfigFile (const std::string& filename, int numstates); + +unsigned int random_int_range (const unsigned int& min, const unsigned int& max); +std::vector sample_without_replacement (const unsigned int& numTotal, + const unsigned int& numSample); + +void print_error (char * pname); +bool test_logical (std::vector& matA, std::vector& matB); +bool test_logical (std::vector& matA, std::vector& matB, bool edgewise); + +int sum_matrix_col (std::vector >& matrix, unsigned int col); +int sum_matrix_col_negs (std::vector >& matrix, int col); + +std::string get_string_vector (std::vector& sts); +std::string get_string_vector (std::vector& sts); + +void replace_all (std::string& str, const std::string& origSubStr, const std::string& replSubStr); +void replace_each (std::string& str, const std::string& badChars, const std::string& replSubStr); + +bool check_nexus_comment (std::string line); +void process_nexus_comment (std::istream& stri, std::string& tline); + +std::string get_valid_newick_label (const std::string& inLabel); +std::string get_valid_nexus_label (const std::string& inLabel); +std::string get_safe_taxon_label (const std::string& inLabel); +void quotify_label (std::string& token); + +template void print_vector (std::vector& vec) { + std::copy(vec.begin(), vec.end(), std::ostream_iterator(std::cout, " ")); + std::cout << std::endl; +} + +unsigned int calc_hamming_dist (const std::string& s1, const std::string& s2); + +double logn (double x, double base); + +bool essentially_equal_doubles (double a, double b); + +// template version to accommodate different precision types +template bool essentially_equal (T a, T b) { + T EPSILON = 1e-7; + /* + std::cout << "fabs(a - b) = " << fabs(a - b) << std::endl; + std::cout << "ApproximatelyEqual: " + << (fabs(a - b) <= ( (fabs(a) < fabs(b) ? fabs(b) : fabs(a)) * EPSILON)) << std::endl; + std::cout << "EssentiallyEqual: " + << (fabs(a - b) <= ( (fabs(a) > fabs(b) ? fabs(b) : fabs(a)) * EPSILON)) << std::endl; + */ + + // not used + /* + if (fabs(a - b) <= std::max(EPSILON, EPSILON * std::max(std::abs(a), std::abs(b)))) { + equal = true; + } + */ + bool equal = (std::abs(a - b) <= ( (std::abs(a) > std::abs(b) ? std::abs(b) : std::abs(a)) * EPSILON)); + + return equal; +} + + +bool all_equal (std::vector vals); +bool all_equal (std::vector vals); +bool all_equal (std::vector vals); + + +// a basic poll checker for stream inputs +bool check_for_input_to_stream (); + +std::vector get_complement (std::vector& a, std::vector& b); + +std::string peek_line (std::istream& pios); +std::vector peek_lines (std::istream& pios, const int& n); + +std::vector regex_search_labels (const std::vector& names, + const std::string& pattern); + +#endif /* PX_UTILS_H */ diff --git a/src/vcf_reader.cpp b/src/vcf_reader.cpp new file mode 100644 index 0000000..7dc5bf7 --- /dev/null +++ b/src/vcf_reader.cpp @@ -0,0 +1,111 @@ +#include +#include +#include +#include + +#include "vcf_reader.h" +#include "utils.h" + + +VcfReader::VcfReader(std::istream* pios) { + read_vcf(pios); +} + + +void VcfReader::read_vcf (std::istream* pios) { + bool started = false; + bool first = true; + // these column numbers should be constant (i think?), but let's not leave anything to chance + size_t refcol = 0; + size_t altcol = 0; + size_t taxstartcol = 0; + size_t ncols = 0; + + std::string line; + while (getline_safe(*pios, line)) { + if (line.empty()) { + continue; + } + std::vector temp = tokenize(line); + if (started) { + // every line below the bottom header line should be site data + std::string refstate = temp[refcol]; + std::string terp = temp[altcol]; + std::vector states = get_alts(terp); + // put all observed states in same vector + states.insert(states.begin(), refstate); + + if (!first) { + size_t counter = 0; + for (size_t i = taxstartcol; i < ncols; i++) { + size_t idx = stoul(temp[i]); + seqs_[counter] += states[idx]; + counter++; + } + } else { + // construct result vector during first data row (site) + for (size_t i = taxstartcol; i < ncols; i++) { + size_t idx = stoul(temp[i]); + seqs_.push_back(states[idx]); + } + first = false; + } + } else { + // skip preceeding lines + if (temp[0] == "#CHROM") { + bool read_taxa = false; + ncols = temp.size(); + for (size_t i = 1; i < ncols; i++) { + if (read_taxa) { + taxa_.push_back(temp[i]); + //std::cout << " " << temp[i]; + } else { + if (temp[i] =="FORMAT") { + // here assuming taxa cols directly follow this column + read_taxa = true; + taxstartcol = i+1; + //std::cout << std::endl << "Taxa:"; + } else if (temp[i] =="REF") { + refcol = i; + } else if (temp[i] =="ALT") { + altcol = i; + } + } + } + //std::cout << std::endl; + started = true; + } + } + } + //std::cout << "Read in " << taxa_.size() << " taxa, each with " << seqs_[0].size() + // << " characters." << std::endl; +} + + + +// *** seems like a general function would be useful here + +// split alt states on comma +std::vector VcfReader::get_alts (const std::string& str) { + std::vector res; + std::stringstream ss(str); + while (ss.good()) { + std::string substr; + getline(ss, substr, ','); + res.push_back(substr); + } + return res; +} + + +void VcfReader::write_seqs (const bool& uppercase, std::ostream* poos) { + for (unsigned int i = 0; i < taxa_.size(); i++) { + (*poos) << ">" << taxa_[i] << std::endl; + if (uppercase) { + std::string terp = string_to_upper(seqs_[i]); + (*poos) << terp << std::endl; + } else { + (*poos) << seqs_[i] << std::endl; + } + } +} diff --git a/src/vcf_reader.h b/src/vcf_reader.h new file mode 100644 index 0000000..061cd62 --- /dev/null +++ b/src/vcf_reader.h @@ -0,0 +1,22 @@ +#ifndef PX_VCF_READER_H +#define PX_VCF_READER_H + +#include +#include +#include + + +class VcfReader { +private: + std::vector taxa_; + std::vector seqs_; + + std::vector get_alts (const std::string& str); + void read_vcf (std::istream* pios); + +public: + explicit VcfReader (std::istream* pios); + void write_seqs (const bool& uppercase, std::ostream* poos); +}; + +#endif /* PX_VCF_READER_H */ diff --git a/src/vector_node_object.h b/src/vector_node_object.h new file mode 100644 index 0000000..48e82fc --- /dev/null +++ b/src/vector_node_object.h @@ -0,0 +1,27 @@ +#ifndef PX_VECTOR_NODE_OBJECT_H +#define PX_VECTOR_NODE_OBJECT_H + +#include + +#include "node_object.h" + + +template +class VectorNodeObject: public std::vector, public NodeObject { +public: + VectorNodeObject(): + std::vector () {} + + VectorNodeObject(typename std::vector::size_type num, const T& val = T() ): + std::vector (num, val) {} + + VectorNodeObject(typename std::vector::iterator start, typename std::vector::iterator end): + std::vector (start, end) {} + + virtual ~VectorNodeObject () {} + +public: + VectorNodeObject * clone () const { return new VectorNodeObject(*this); } +}; + +#endif /* PX_VECTOR_NODE_OBJECT_H */ -- cgit v1.2.3 From 8b1e601d225d58d41bcca98ff78648a52bd55cd0 Mon Sep 17 00:00:00 2001 From: Andreas Tille Date: Tue, 15 Nov 2022 07:43:33 +0100 Subject: Import phyx_1.3+ds-2.debian.tar.xz [dgit import tarball phyx 1.3+ds-2 phyx_1.3+ds-2.debian.tar.xz] --- README.test | 8 + changelog | 105 ++++++++++++ control | 35 ++++ copyright | 27 +++ createmanpages | 61 +++++++ doc-base | 20 +++ docs | 3 + examples | 1 + manpages | 1 + mans/pxaa2cdn.1 | 31 ++++ mans/pxbdfit.1 | 29 ++++ mans/pxbdsim.1 | 44 +++++ mans/pxboot.1 | 37 ++++ mans/pxbp.1 | 27 +++ mans/pxcat.1 | 44 +++++ mans/pxclsq.1 | 37 ++++ mans/pxconsq.1 | 27 +++ mans/pxcontrates.1 | 34 ++++ mans/pxfqfilt.1 | 30 ++++ mans/pxlog.1 | 52 ++++++ mans/pxlssq.1 | 50 ++++++ mans/pxlstr.1 | 52 ++++++ mans/pxmrca.1 | 31 ++++ mans/pxmrcacut.1 | 31 ++++ mans/pxmrcaname.1 | 33 ++++ mans/pxnj.1 | 30 ++++ mans/pxnw.1 | 45 +++++ mans/pxrecode.1 | 27 +++ mans/pxrevcomp.1 | 27 +++ mans/pxrls.1 | 34 ++++ mans/pxrlt.1 | 34 ++++ mans/pxrms.1 | 33 ++++ mans/pxrmt.1 | 36 ++++ mans/pxrr.1 | 36 ++++ mans/pxs2fa.1 | 30 ++++ mans/pxs2nex.1 | 30 ++++ mans/pxs2phy.1 | 30 ++++ mans/pxseqgen.1 | 74 ++++++++ mans/pxstrec.1 | 50 ++++++ mans/pxsw.1 | 45 +++++ mans/pxt2new.1 | 27 +++ mans/pxtlate.1 | 35 ++++ mans/pxtscale.1 | 32 ++++ mans/pxupgma.1 | 27 +++ mans/pxvcf2fa.1 | 31 ++++ patches/build-more-programs.patch | 14 ++ patches/hardening.patch | 344 ++++++++++++++++++++++++++++++++++++++ patches/i386.patch | 22 +++ patches/series | 3 + phyx.logfile | 2 + rules | 35 ++++ salsa-ci.yml | 4 + source/format | 1 + tests/control | 3 + tests/run-unit-test | 99 +++++++++++ upstream/metadata | 10 ++ watch | 5 + 57 files changed, 2105 insertions(+) create mode 100644 README.test create mode 100644 changelog create mode 100644 control create mode 100644 copyright create mode 100755 createmanpages create mode 100644 doc-base create mode 100644 docs create mode 100644 examples create mode 100644 manpages create mode 100644 mans/pxaa2cdn.1 create mode 100644 mans/pxbdfit.1 create mode 100644 mans/pxbdsim.1 create mode 100644 mans/pxboot.1 create mode 100644 mans/pxbp.1 create mode 100644 mans/pxcat.1 create mode 100644 mans/pxclsq.1 create mode 100644 mans/pxconsq.1 create mode 100644 mans/pxcontrates.1 create mode 100644 mans/pxfqfilt.1 create mode 100644 mans/pxlog.1 create mode 100644 mans/pxlssq.1 create mode 100644 mans/pxlstr.1 create mode 100644 mans/pxmrca.1 create mode 100644 mans/pxmrcacut.1 create mode 100644 mans/pxmrcaname.1 create mode 100644 mans/pxnj.1 create mode 100644 mans/pxnw.1 create mode 100644 mans/pxrecode.1 create mode 100644 mans/pxrevcomp.1 create mode 100644 mans/pxrls.1 create mode 100644 mans/pxrlt.1 create mode 100644 mans/pxrms.1 create mode 100644 mans/pxrmt.1 create mode 100644 mans/pxrr.1 create mode 100644 mans/pxs2fa.1 create mode 100644 mans/pxs2nex.1 create mode 100644 mans/pxs2phy.1 create mode 100644 mans/pxseqgen.1 create mode 100644 mans/pxstrec.1 create mode 100644 mans/pxsw.1 create mode 100644 mans/pxt2new.1 create mode 100644 mans/pxtlate.1 create mode 100644 mans/pxtscale.1 create mode 100644 mans/pxupgma.1 create mode 100644 mans/pxvcf2fa.1 create mode 100644 patches/build-more-programs.patch create mode 100644 patches/hardening.patch create mode 100644 patches/i386.patch create mode 100644 patches/series create mode 100644 phyx.logfile create mode 100755 rules create mode 100644 salsa-ci.yml create mode 100644 source/format create mode 100644 tests/control create mode 100644 tests/run-unit-test create mode 100644 upstream/metadata create mode 100644 watch diff --git a/README.test b/README.test new file mode 100644 index 0000000..90657cf --- /dev/null +++ b/README.test @@ -0,0 +1,8 @@ +Notes on how this package can be tested. +──────────────────────────────────────── + +This package can be tested by running the provided test: + + sh run-unit-test + +in order to confirm its integrity. diff --git a/changelog b/changelog new file mode 100644 index 0000000..e0f05cd --- /dev/null +++ b/changelog @@ -0,0 +1,105 @@ +phyx (1.3+ds-2) unstable; urgency=medium + + [ Olek Wojnar ] + * Remove unneeded dependency on libatlas-cpp + + [ Andreas Tille ] + * Standards-Version: 4.6.1 (routine-update) + * No tab in license text (routine-update) + + -- Andreas Tille Tue, 15 Nov 2022 07:43:33 +0100 + +phyx (1.3+ds-1) unstable; urgency=medium + + [ Nilesh Patra ] + * Team upload. + * New upstream version + * Standards-Version: 4.5.1 (routine-update) + * debhelper-compat 13 (routine-update) + * Refresh and remove merged patches + * Enhance d/u/metadata + * d/p/hardening.patch: Propagate hardening options + * d/tests/run-unit-test: Fix file locations + * d/p/build-more-programs.patch: Also build and vendor pxupgma pxnj + * d/tests/run-unit-test: Fix autopkgtests + * Drop link_lnopt.patch + + [ Étienne Mollier ] + * Add i386.patch: removing -ffast-math fixes NaN errors on i387 FPU. + + -- Étienne Mollier Thu, 14 Apr 2022 14:53:02 +0200 + +phyx (1.01+ds-2) unstable; urgency=medium + + * Team upload + + [ Nilesh Patra ] + * Add patch to build with g++-10 + Closes: #957683 + + [ Andreas Tille ] + * Standards-Version: 4.5.0 (routine-update) + * Add salsa-ci file (routine-update) + * Rules-Requires-Root: no (routine-update) + * debian/copyright: use spaces rather than tabs to start continuation + lines. + * Set upstream metadata fields: Bug-Database, Bug-Submit. + + -- Nilesh Patra Fri, 17 Apr 2020 21:56:19 +0200 + +phyx (1.01+ds-1) unstable; urgency=medium + + * Team upload. + * New upstream version + * Removed obsolete 2to3 patch + * Adjusted cleanup after build + * Not having upstream's auto-generated src/configure in source tree + + -- Steffen Moeller Thu, 12 Dec 2019 12:50:28 +0100 + +phyx (1.0+ds-1) unstable; urgency=medium + + * Team upload + + [ Andreas Tille ] + * Install Phyx_Gui + * Provide README.test to explain how to run test suite as user example + + [ Shayan Doust ] + * New upstream release + + -- Shayan Doust Fri, 13 Sep 2019 02:47:52 +0100 + +phyx (0.999+ds-2) unstable; urgency=medium + + * Team upload + + [ Steffen Möller ] + * Add new d/u/metadata file + + [ Afif Elghraoui ] + * Remove myself from Uploaders + + [ Shayan Doust ] + * Port couple of python files from python2 to python3 + Closes: #937285 + * Set debhelper 12 from 11 + + [ Andreas Tille ] + * debhelper-compat 12 + * Standards-Version: 4.4.0 + * Add autopkgtest + + -- Shayan Doust Wed, 11 Sep 2019 21:17:58 +0200 + +phyx (0.999+ds-1) unstable; urgency=medium + + * New upstream version + + -- Andreas Tille Mon, 15 Oct 2018 16:19:59 +0200 + +phyx (0.99+ds-1) unstable; urgency=medium + + * Initial release (Closes: #855597) + + -- Andreas Tille Sat, 08 Sep 2018 22:16:39 +0200 diff --git a/control b/control new file mode 100644 index 0000000..619509d --- /dev/null +++ b/control @@ -0,0 +1,35 @@ +Source: phyx +Maintainer: Debian Med Packaging Team +Uploaders: Andreas Tille +Section: science +Priority: optional +Build-Depends: debhelper-compat (= 13), + python3, + liblapack-dev, + libnlopt-cxx-dev, + libnlopt-dev, + libarmadillo-dev +Standards-Version: 4.6.1 +Vcs-Browser: https://salsa.debian.org/med-team/phyx +Vcs-Git: https://salsa.debian.org/med-team/phyx.git +Homepage: https://github.com/FePhyFoFum/phyx +Rules-Requires-Root: no + +Package: phyx +Architecture: any +Depends: ${shlibs:Depends}, + ${misc:Depends}, + python3 +Description: UNIX-style phylogenetic analyses on trees and sequences + phyx provides a convenient, lightweight and inclusive toolkit consisting of + programs spanning the wide breadth of programs utilized by researchers + performing phylogenomic analyses. Modeled after Unix/GNU/Linux command + line tools, individual programs perform a single task and operate on + standard I/O streams. A result of this stream-centric approach is that, for + most programs, only a single sequence or tree is in memory at any moment. + Thus, large datasets can be processed with minimal memory requirements. + phyx’s ever-growing complement of programs consists of over 35 programs + focused on exploring, manipulating, analyzing and simulating phylogenetic + objects (alignments, trees and MCMC logs). As with standard Unix command + line tools, these programs can be piped (together with non-phyx tools), + allowing the easy construction of efficient analytical pipelines. diff --git a/copyright b/copyright new file mode 100644 index 0000000..427fede --- /dev/null +++ b/copyright @@ -0,0 +1,27 @@ +Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Upstream-Name: phyx +Source: https://github.com/FePhyFoFum/phyx/releases +Files-Excluded: + deps + src/configure + +Files: * +Copyright: 2014-2017 Joseph W. Brown, Joseph F. Walker, and Stephen A. Smith +License: GPL-3 + +Files: debian/* +Copyright: 2017 Afif Elghraoui +License: GPL-3 + +License: GPL-3 + This program is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License. + . + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + . + On Debian systems you can find the full text of the GNU General Public + License version 3 at /usr/share/common-licenses/GPL-3. diff --git a/createmanpages b/createmanpages new file mode 100755 index 0000000..d467e19 --- /dev/null +++ b/createmanpages @@ -0,0 +1,61 @@ +#!/bin/sh +MANDIR=debian/mans +mkdir -p $MANDIR + +VERSION=`dpkg-parsechangelog | awk '/^Version:/ {print $2}' | sed -e 's/^[0-9]*://' -e 's/-.*//' -e 's/[+~]dfsg$//'` + +AUTHOR=".SH AUTHOR\nThis manpage was written by $DEBFULLNAME for the Debian distribution and +can be used for any other usage of the program. +" + +PROGS="pxaa2cdn \ + pxbdfit \ + pxbdsim \ + pxboot \ + pxbp \ + pxcat \ + pxclsq \ + pxconsq \ + pxcontrates \ + pxfqfilt \ + pxlog \ + pxlssq \ + pxlstr \ + pxmrca \ + pxmrcacut \ + pxmrcaname \ + pxnj \ + pxnw \ + pxrecode \ + pxrevcomp \ + pxrls \ + pxrlt \ + pxrms \ + pxrmt \ + pxrr \ + pxs2fa \ + pxs2nex \ + pxs2phy \ + pxseqgen \ + pxstrec \ + pxsw \ + pxt2new \ + pxtlate \ + pxtscale \ + pxupgma \ + pxvcf2fa" + +for progname in $PROGS ; do + title=`$progname --help | head -n1` + help2man --no-info --no-discard-stderr --help-option=" --help" \ + --name="$title" \ + --version-string="$VERSION" ${progname} > $MANDIR/${progname}.1 + echo $AUTHOR >> $MANDIR/${progname}.1 +done + +cat < +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxbdfit.1 b/mans/pxbdfit.1 new file mode 100644 index 0000000..9ea759a --- /dev/null +++ b/mans/pxbdfit.1 @@ -0,0 +1,29 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXBDFIT "1" "May 2018" "pxbdfit 0.99+ds" "User Commands" +.SH NAME +pxbdfit \- Birth-death inference +.SH SYNOPSIS +.B pxbdfit +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Birth\-death inference +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input treefile, stdin otherwise +.TP +\fB\-m\fR, \fB\-\-model\fR=\fI\,STRING\/\fR +diversification model; either 'yule' or 'bd' (default) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, stout otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxbdsim.1 b/mans/pxbdsim.1 new file mode 100644 index 0000000..f3fc0b5 --- /dev/null +++ b/mans/pxbdsim.1 @@ -0,0 +1,44 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXBDSIM "1" "May 2018" "pxbdsim 0.99+ds" "User Commands" +.SH NAME +pxbdsim \- Birth-death simulator. +.SH SYNOPSIS +.B pxbdsim +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Birth\-death simulator. +.TP +\fB\-e\fR, \fB\-\-extant\fR=\fI\,INT\/\fR +number of extant species, alt to time +.TP +\fB\-t\fR, \fB\-\-time\fR=\fI\,INT\/\fR +depth of the tree, alt to extant +.TP +\fB\-b\fR, \fB\-\-birth\fR=\fI\,DOUBLE\/\fR +birth rate, default=1 +.TP +\fB\-d\fR, \fB\-\-death\fR=\fI\,DOUBLE\/\fR +death rate, default=0 +.TP +\fB\-n\fR, \fB\-\-nreps\fR=\fI\,INT\/\fR +number of replicates, default=1 +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, stout otherwise +.TP +\fB\-s\fR, \fB\-\-showd\fR +show dead taxa +.TP +\fB\-x\fR, \fB\-\-seed\fR=\fI\,INT\/\fR +random number seed, clock otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxboot.1 b/mans/pxboot.1 new file mode 100644 index 0000000..cfa8c4c --- /dev/null +++ b/mans/pxboot.1 @@ -0,0 +1,37 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXBOOT "1" "May 2018" "pxboot 0.99+ds" "User Commands" +.SH NAME +pxboot \- Sequence alignment bootstrap or jackknife resampling. +.SH SYNOPSIS +.B pxboot +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Sequence alignment bootstrap or jackknife resampling. +This will take fasta, fastq, phylip, and nexus inputs. +Can read from stdin or file. +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, stout otherwise +.TP +\fB\-p\fR, \fB\-\-partf\fR=\fI\,FILE\/\fR +file listing empirical partitions: NAME = START\-STOP[\eINTERVAL] +.TP +\fB\-f\fR, \fB\-\-frac\fR=\fI\,DOUBLE\/\fR +jackknife percentage, default bootstrap (i.e. \fB\-f\fR 1.0) +.TP +\fB\-x\fR, \fB\-\-seed\fR=\fI\,INT\/\fR +random number seed, clock otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxbp.1 b/mans/pxbp.1 new file mode 100644 index 0000000..1b71077 --- /dev/null +++ b/mans/pxbp.1 @@ -0,0 +1,27 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXBP "1" "May 2018" "pxbp 0.99+ds" "User Commands" +.SH NAME +pxbp \- This will print out bipartitions found in treefile. +.SH SYNOPSIS +.B pxbp +[\fI\,OPTION\/\fR]... [\fI\,FILE\/\fR]... +.SH DESCRIPTION +This will print out bipartitions found in treefile. +Can read from stdin or file. +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input treefile, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, stout otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxcat.1 b/mans/pxcat.1 new file mode 100644 index 0000000..6a4e6d1 --- /dev/null +++ b/mans/pxcat.1 @@ -0,0 +1,44 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXCAT "1" "May 2018" "pxcat 0.99+ds" "User Commands" +.SH NAME +pxcat \- Sequence file concatenation. +.SH SYNOPSIS +.B pxcat +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Sequence file concatenation. +Can use wildcards e.g.: +.IP +pxcat \fB\-s\fR *.phy \fB\-o\fR my_cat_file.fa +.SS "However, if the argument list is too long (shell limit), put filenames in a file:" +.IP +for x in *.phy; do echo $x >> flist.txt; done +.SS "and call using the -f option:" +.IP +pxcat \fB\-f\fR flist.txt \fB\-o\fR my_cat_file.fa +.PP +This will take fasta, fastq, phylip, and nexus inputs. +Individual files can be of different formats. +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +list of input sequence files (space delimited) +.TP +\fB\-f\fR, \fB\-\-flistFILE\fR +file listing input files (one per line) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, stout otherwise +.TP +\fB\-p\fR, \fB\-\-partf\fR=\fI\,FILE\/\fR +output partition file, none otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxclsq.1 b/mans/pxclsq.1 new file mode 100644 index 0000000..6c95ffc --- /dev/null +++ b/mans/pxclsq.1 @@ -0,0 +1,37 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXCLSQ "1" "May 2018" "pxclsq 0.99+ds" "User Commands" +.SH NAME +pxclsq \- Cleans alignments by removing positions with too much ambiguous data. +.SH SYNOPSIS +.B pxclsq +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Cleans alignments by removing positions with too much ambiguous data. +This will take fasta, fastq, phylip, and nexus inputs. +Results are written in fasta format. +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output fasta file, stout otherwise +.TP +\fB\-p\fR, \fB\-\-prop\fR=\fI\,DOUBLE\/\fR +proportion required to be present, default=0.5 +.TP +\fB\-a\fR, \fB\-\-aminoacid\fR +force interpret as protein (if inference fails) +.TP +\fB\-v\fR, \fB\-\-verbose\fR +more verbose output (i.e. if entire seqs are removed) +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxconsq.1 b/mans/pxconsq.1 new file mode 100644 index 0000000..3a0c853 --- /dev/null +++ b/mans/pxconsq.1 @@ -0,0 +1,27 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXCONSQ "1" "May 2018" "pxconsq 0.99+ds" "User Commands" +.SH NAME +pxconsq \- Consensus sequences from nexus, phylip, or fastq to fasta. +.SH SYNOPSIS +.B pxconsq +[\fI\,OPTION\/\fR]... [\fI\,FILE\/\fR]... +.SH DESCRIPTION +Consensus sequences from nexus, phylip, or fastq to fasta. +Can read from stdin or file. +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, stout otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxcontrates.1 b/mans/pxcontrates.1 new file mode 100644 index 0000000..7bc794d --- /dev/null +++ b/mans/pxcontrates.1 @@ -0,0 +1,34 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXCONTRATES "1" "May 2018" "pxcontrates 0.99+ds" "User Commands" +.SH NAME +pxcontrates \- Continuous character rate estimation with Brownian and OU. +.SH SYNOPSIS +.B pxcontrates +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Continuous character rate estimation with Brownian and OU. +This will take fasta, phylip (and soon nexus) inputs. +Can read from stdin or file. +.TP +\fB\-c\fR, \fB\-\-charf\fR=\fI\,FILE\/\fR +input character file, stdin otherwise +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, stdin otherwise +.TP +\fB\-a\fR, \fB\-\-analysis\fR=\fI\,NUM\/\fR +analysis type (0=anc[DEFAULT], 1=ratetest) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, stout otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxfqfilt.1 b/mans/pxfqfilt.1 new file mode 100644 index 0000000..e34fa42 --- /dev/null +++ b/mans/pxfqfilt.1 @@ -0,0 +1,30 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXFQFILT "1" "May 2018" "pxfqfilt 0.99+ds" "User Commands" +.SH NAME +pxfqfilt \- Filter fastq files by mean quality. +.SH SYNOPSIS +.B pxfqfilt +[\fI\,OPTION\/\fR]... [\fI\,FILE\/\fR]... +.SH DESCRIPTION +Filter fastq files by mean quality. +Can read from stdin or file. +.TP +\fB\-m\fR, \fB\-\-mean\fR=\fI\,VALUE\/\fR +mean value under which seqs are filtered +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, stout otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxlog.1 b/mans/pxlog.1 new file mode 100644 index 0000000..d3fb950 --- /dev/null +++ b/mans/pxlog.1 @@ -0,0 +1,52 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXLOG "1" "May 2018" "pxlog 0.99+ds" "User Commands" +.SH NAME +pxlog \- MCMC log file manipulator. +.SH SYNOPSIS +.B pxlog +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +MCMC log file manipulator. +Can combine and resample parameters or trees across files. +Log files need not contain the same number of samples. +Input files may be indicated using wildcards e.g. '*.trees' +Parameter log files are expected to be whitespace delimited. +*NOTE* All values are in terms of number of SAMPLES (NOT generations). +.TP +\fB\-p\fR, \fB\-\-parmf\fR=\fI\,FILE\/\fR +input parameter log file(s) +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree log file(s) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, stout otherwise +.TP +\fB\-b\fR, \fB\-\-burnin\fR=\fI\,INT\/\fR +number of samples to exclude at the beginning of a file +.TP +\fB\-n\fR, \fB\-\-thin\fR=\fI\,INT\/\fR +interval of resampling +.TP +\fB\-r\fR, \fB\-\-rand\fR=\fI\,INT\/\fR +number of random samples (without replacement) not yet implemented! +.TP +\fB\-i\fR, \fB\-\-info\fR +calculate log file attributes and exit +.TP +\fB\-x\fR, \fB\-\-seed\fR=\fI\,INT\/\fR +random number seed, clock otherwise +.TP +\fB\-v\fR, \fB\-\-verbose\fR +make the output more verbose +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxlssq.1 b/mans/pxlssq.1 new file mode 100644 index 0000000..6fa30b5 --- /dev/null +++ b/mans/pxlssq.1 @@ -0,0 +1,50 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXLSSQ "1" "May 2018" "pxlssq 0.99+ds" "User Commands" +.SH NAME +pxlssq \- Print sequence file summary +.SH SYNOPSIS +.B pxlssq +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Print sequence file summary +By default returns all properties. Alternatively choose 1 property. +This will take fasta, phylip or nexus file formats +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input seq file, stdin otherwise +.TP +\fB\-i\fR, \fB\-\-indiv\fR +output stats for individual sequences +.TP +\fB\-n\fR, \fB\-\-nseq\fR +return the number of sequences +.TP +\fB\-c\fR, \fB\-\-nchar\fR +return the number of characters (only if aligned) +\- for unaligned seqs, use with \fB\-i\fR flag +.TP +\fB\-l\fR, \fB\-\-labels\fR +return all taxon labels (one per line) +.TP +\fB\-p\fR, \fB\-\-prot\fR +force interpret as protein (if inference fails) +.TP +\fB\-a\fR, \fB\-\-aligned\fR +return whether sequences are aligned (same length) +.TP +\fB\-f\fR, \fB\-\-freqs\fR +return character state frequencies +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output stats file, stout otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxlstr.1 b/mans/pxlstr.1 new file mode 100644 index 0000000..37435dd --- /dev/null +++ b/mans/pxlstr.1 @@ -0,0 +1,52 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXLSTR "1" "May 2018" "pxlstr 0.99+ds" "User Commands" +.SH NAME +pxlstr \- Print tree summary +.SH SYNOPSIS +.B pxlstr +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Print tree summary +By default returns all properties. Alternatively choose 1 property. +This will take newick or nexus files +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, stdin otherwise +.TP +\fB\-r\fR, \fB\-\-rooted\fR +return whether the tree is rooted +.TP +\fB\-a\fR, \fB\-\-age\fR +return the height of root (must be rooted and ultrametric) +.TP +\fB\-n\fR, \fB\-\-ntips\fR +return the number of terminals +.TP +\fB\-u\fR, \fB\-\-ultrametric\fR +return whether tree is ultrametric +.TP +\fB\-b\fR, \fB\-\-binary\fR +return whether tree is binary +.TP +\fB\-l\fR, \fB\-\-length\fR +return the length of the tree +.TP +\fB\-i\fR, \fB\-\-tiplabels\fR +return all tip labels (one per line) +.TP +\fB\-v\fR, \fB\-\-rtvar\fR +return root\-to\-tip variance +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output tree file, stout otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxmrca.1 b/mans/pxmrca.1 new file mode 100644 index 0000000..371ee7b --- /dev/null +++ b/mans/pxmrca.1 @@ -0,0 +1,31 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXMRCA "1" "May 2018" "pxmrca 0.99+ds" "User Commands" +.SH NAME +pxmrca \- Get the number of descendant tips of internal nodes specified by mrca statements. +.SH SYNOPSIS +.B pxmrcacut +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Get the number of descendant tips of internal nodes specified by mrca statements. +Takes in newick tree and MRCA file with format: +MRCANAME = tip1 tip2 ... +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input newick tree file, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output newick file, stout otherwise +.TP +\fB\-m\fR, \fB\-\-mrca\fR=\fI\,FILE\/\fR +file containing MRCA declarations +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxmrcacut.1 b/mans/pxmrcacut.1 new file mode 100644 index 0000000..9684be9 --- /dev/null +++ b/mans/pxmrcacut.1 @@ -0,0 +1,31 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXMRCACUT "1" "May 2018" "pxmrcacut 0.99+ds" "User Commands" +.SH NAME +pxmrcacut \- Extract subclade(s) from tree(s). +.SH SYNOPSIS +.B pxmrcacut +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Extract subclade(s) from tree(s). +Takes in newick tree and MRCA file with format: +MRCANAME = tip1 tip2 ... +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input newick tree file, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output newick file, stout otherwise +.TP +\fB\-m\fR, \fB\-\-mrca\fR=\fI\,FILE\/\fR +file containing MRCA declarations +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxmrcaname.1 b/mans/pxmrcaname.1 new file mode 100644 index 0000000..5e85300 --- /dev/null +++ b/mans/pxmrcaname.1 @@ -0,0 +1,33 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXMRCANAME "1" "May 2018" "pxmrcaname 0.99+ds" "User Commands" +.SH NAME +pxmrcaname \- Label internal nodes with clade names. +.SH SYNOPSIS +.B pxmrcaname +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Label internal nodes with clade names. +Takes in newick tree and MRCA file with format: +MRCANAME = tip1 tip2 ... +If no MRCA file is present, this will label anything +that isn't labeled +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input newick tree file, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output newick file, stout otherwise +.TP +\fB\-m\fR, \fB\-\-mrca\fR=\fI\,FILE\/\fR +file containing MRCA declarations +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxnj.1 b/mans/pxnj.1 new file mode 100644 index 0000000..1294843 --- /dev/null +++ b/mans/pxnj.1 @@ -0,0 +1,30 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXNJ "1" "May 2018" "pxnj 0.99+ds" "User Commands" +.SH NAME +pxnj \- Basic Neighbour-Joining Tree Maker. +.SH SYNOPSIS +.B pxnj +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Basic Neighbour\-Joining Tree Maker. +This will take fasta, fastq, phylip, and nexus inputs. +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output newick file, stout otherwise +.TP +\fB\-n\fR, \fB\-\-nthreads\fR=\fI\,INT\/\fR +number of threads, default=1 +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxnw.1 b/mans/pxnw.1 new file mode 100644 index 0000000..f150f52 --- /dev/null +++ b/mans/pxnw.1 @@ -0,0 +1,45 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXNW "1" "May 2018" "pxnw 0.99+ds" "User Commands" +.SH NAME +pxnw \- Conduct Needleman-Wunsch analysis for all the seqs in a file. +.SH SYNOPSIS +.B pxnw +[\fI\,OPTION\/\fR]... [\fI\,FILE\/\fR]... +.SH DESCRIPTION +Conduct Needleman\-Wunsch analysis for all the seqs in a file. +This will take fasta, fastq, phylip, and nexus inputs. +Output is a list of the scores and distances (and the alignments +if asked). +Can read from stdin or file. +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output score/distance file, stout otherwise +.TP +\fB\-a\fR, \fB\-\-outalnf\fR=\fI\,FILE\/\fR +output sequence file, won't output otherwise +.TP +\fB\-t\fR, \fB\-\-seqtype\fR=\fI\,INT\/\fR +sequence type, default=DNA (DNA=0,AA=1) +.TP +\fB\-m\fR, \fB\-\-matrix\fR=\fI\,FILE\/\fR +scoring matrix, default DNA=EDNAFULL, AA=BLOSUM62 +.TP +\fB\-n\fR, \fB\-\-nthreads\fR=\fI\,INT\/\fR +number of threads (open mp), default=2 +.TP +\fB\-v\fR, \fB\-\-verbose\fR +make the output more verbose, turns off parallel +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxrecode.1 b/mans/pxrecode.1 new file mode 100644 index 0000000..4f6ab5d --- /dev/null +++ b/mans/pxrecode.1 @@ -0,0 +1,27 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXRECODE "1" "May 2018" "pxrecode 0.99+ds" "User Commands" +.SH NAME +pxrecode \- Sequence recoding. Currently only to RY, but more coming. +.SH SYNOPSIS +.B pxrecode +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Sequence recoding. Currently only to RY, but more coming. +This will take fasta, fastq, phylip, and nexus inputs. +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, stout otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxrevcomp.1 b/mans/pxrevcomp.1 new file mode 100644 index 0000000..967eddd --- /dev/null +++ b/mans/pxrevcomp.1 @@ -0,0 +1,27 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXREVCOMP "1" "May 2018" "pxrevcomp 0.99+ds" "User Commands" +.SH NAME +pxrevcomp \- Reverse complement sequences from nexus, phylip, or fastq to fasta. +.SH SYNOPSIS +.B pxrevcomp +[\fI\,OPTION\/\fR]... [\fI\,FILE\/\fR]... +.SH DESCRIPTION +Reverse complement sequences from nexus, phylip, or fastq to fasta. +Can read from stdin or file, but output is fasta. +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, stout otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxrls.1 b/mans/pxrls.1 new file mode 100644 index 0000000..41f42ab --- /dev/null +++ b/mans/pxrls.1 @@ -0,0 +1,34 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXRLS "1" "May 2018" "pxrls 0.99+ds" "User Commands" +.SH NAME +pxrls \- Taxon relabelling for alignments. +.SH SYNOPSIS +.B pxrls +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Taxon relabelling for alignments. +This will take fasta, phylip or nexus file formats +Two ordered lists of taxa, \fB\-c\fR (current) and \fB\-n\fR (new) must be provided. +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input seq file, stdin otherwise +.TP +\fB\-c\fR, \fB\-\-cnames\fR=\fI\,FILE\/\fR +file containing current taxon labels (one per line) +.TP +\fB\-n\fR, \fB\-\-nnames\fR=\fI\,FILE\/\fR +file containing new taxon labels (one per line) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, stout otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxrlt.1 b/mans/pxrlt.1 new file mode 100644 index 0000000..133bdf6 --- /dev/null +++ b/mans/pxrlt.1 @@ -0,0 +1,34 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXRLT "1" "May 2018" "pxrlt 0.99+ds" "User Commands" +.SH NAME +pxrlt \- Taxon relabelling for trees. +.SH SYNOPSIS +.B pxrlt +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Taxon relabelling for trees. +This will take nexus and newick inputs. +Two ordered lists of taxa, \fB\-c\fR (current) and \fB\-n\fR (new) must be provided. +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, stdin otherwise +.TP +\fB\-c\fR, \fB\-\-cnames\fR=\fI\,FILE\/\fR +file containing current taxon labels (one per line) +.TP +\fB\-n\fR, \fB\-\-nnames\fR=\fI\,FILE\/\fR +file containing new taxon labels (one per line) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, stout otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxrms.1 b/mans/pxrms.1 new file mode 100644 index 0000000..2691908 --- /dev/null +++ b/mans/pxrms.1 @@ -0,0 +1,33 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXRMS "1" "May 2018" "pxrms 0.99+ds" "User Commands" +.SH NAME +pxrms \- Removes unwanted sequences +.SH SYNOPSIS +.B pxrms +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Removes unwanted sequences +This will take fasta, fastq, phylip, and nexus inputs. +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input nucleotide sequence file, stdin otherwise +.TP +\fB\-n\fR, \fB\-\-names\fR=\fI\,CSL\/\fR +names sep by commas (NO SPACES!) +.TP +\fB\-f\fR, \fB\-\-namesf\fR=\fI\,FILE\/\fR +names in a file (each on a line) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output aa sequence file, stout otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxrmt.1 b/mans/pxrmt.1 new file mode 100644 index 0000000..dd6e257 --- /dev/null +++ b/mans/pxrmt.1 @@ -0,0 +1,36 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXRMT "1" "May 2018" "pxrmt 0.99+ds" "User Commands" +.SH NAME +pxrmt \- This will remove tips from a tree file and produce newick +.SH SYNOPSIS +.B pxrmt +[\fI\,OPTION\/\fR]... [\fI\,FILE\/\fR]... +.SH DESCRIPTION +This will remove tips from a tree file and produce newick +Can read from stdin or file +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, stdin otherwise +.TP +\fB\-n\fR, \fB\-\-names\fR=\fI\,CSL\/\fR +names sep by commas (NO SPACES!) +.TP +\fB\-f\fR, \fB\-\-namesf\fR=\fI\,FILE\/\fR +names in a file (each on a line) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output tree file, stout otherwise +.TP +\fB\-s\fR, \fB\-\-silent\fR +suppress warnings of missing tips +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxrr.1 b/mans/pxrr.1 new file mode 100644 index 0000000..58efab4 --- /dev/null +++ b/mans/pxrr.1 @@ -0,0 +1,36 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXRR "1" "May 2018" "pxrr 0.99+ds" "User Commands" +.SH NAME +pxrr \- This will reroot (or unroot) a tree file and produce a newick. +.SH SYNOPSIS +.B pxrr +[\fI\,OPTION\/\fR]... [\fI\,FILE\/\fR]... +.SH DESCRIPTION +This will reroot (or unroot) a tree file and produce a newick. +Can read from stdin or file. +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, stdin otherwise +.TP +\fB\-g\fR, \fB\-\-outgroups\fR=\fI\,CSL\/\fR +outgroup sep by commas (NO SPACES!) +.TP +\fB\-u\fR, \fB\-\-unroot\fR +unroot the tree +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output tree file, stout otherwise +.TP +\fB\-s\fR, \fB\-\-silent\fR +do not error if outgroup(s) not found +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxs2fa.1 b/mans/pxs2fa.1 new file mode 100644 index 0000000..1153e95 --- /dev/null +++ b/mans/pxs2fa.1 @@ -0,0 +1,30 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXS2FA "1" "May 2018" "pxs2fa 0.99+ds" "User Commands" +.SH NAME +pxs2fa \- Convert seqfiles from nexus,phylip, fastq to fasta. +.SH SYNOPSIS +.B pxs2fa +[\fI\,OPTION\/\fR]... [\fI\,FILE\/\fR]... +.SH DESCRIPTION +Convert seqfiles from nexus,phylip, fastq to fasta. +Can read from stdin or file. +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, stout otherwise +.TP +\fB\-u\fR, \fB\-\-uppercase\fR +export characters in uppercase +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxs2nex.1 b/mans/pxs2nex.1 new file mode 100644 index 0000000..51805c9 --- /dev/null +++ b/mans/pxs2nex.1 @@ -0,0 +1,30 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXS2NEX "1" "May 2018" "pxs2nex 0.99+ds" "User Commands" +.SH NAME +pxs2nex \- Convert seqfiles from nexus, phylip, or fastq to nexus. +.SH SYNOPSIS +.B pxs2nex +[\fI\,OPTION\/\fR]... [\fI\,FILE\/\fR]... +.SH DESCRIPTION +Convert seqfiles from nexus, phylip, or fastq to nexus. +Can read from stdin or file. +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, stout otherwise +.TP +\fB\-u\fR, \fB\-\-uppercase\fR +export characters in uppercase +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxs2phy.1 b/mans/pxs2phy.1 new file mode 100644 index 0000000..90b61e9 --- /dev/null +++ b/mans/pxs2phy.1 @@ -0,0 +1,30 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXS2PHY "1" "May 2018" "pxs2phy 0.99+ds" "User Commands" +.SH NAME +pxs2phy \- Convert seqfiles from nexus, phylip, or fastq to phylip. +.SH SYNOPSIS +.B pxs2phy +[\fI\,OPTION\/\fR]... [\fI\,FILE\/\fR]... +.SH DESCRIPTION +Convert seqfiles from nexus, phylip, or fastq to phylip. +Can read from stdin or file. +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output sequence file, stout otherwise +.TP +\fB\-u\fR, \fB\-\-uppercase\fR +export characters in uppercase +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxseqgen.1 b/mans/pxseqgen.1 new file mode 100644 index 0000000..ed8ce76 --- /dev/null +++ b/mans/pxseqgen.1 @@ -0,0 +1,74 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXSEQGEN "1" "May 2018" "pxseqgen 0.99+ds" "User Commands" +.SH NAME +pxseqgen \- Basic sequence simulator under the GTR model. +.SH SYNOPSIS +.B pxseqgen +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Basic sequence simulator under the GTR model. +This will take fasta, fastq, phylip, and nexus inputs. +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input treefile, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output seq file, stout otherwise +.TP +\fB\-l\fR, \fB\-\-length\fR=\fI\,INT\/\fR +length of sequences to generate. default is 1000 +.TP +\fB\-b\fR, \fB\-\-basef\fR=\fI\,Input\/\fR +comma\-delimited base freqs in order: A,C,G,T. default is equal +.TP +\fB\-g\fR, \fB\-\-gamma\fR=\fI\,INT\/\fR +gamma shape value. default is no rate variation +.TP +\fB\-i\fR, \fB\-\-pinvar\fR=\fI\,FLOAT\/\fR +proportion of invariable sites. default is 0.0 +.TP +\fB\-r\fR, \fB\-\-ratemat\fR=\fI\,Input\/\fR +comma\-delimited input values for rate matrix. default is JC69 +order: A<\->C,A<\->G,A<\->T,C<\->G,C<\->T,G<\->T +.TP +\fB\-w\fR, \fB\-\-aaratemat\fR=\fI\,Input\/\fR +comma\-delimited amino acid rate matrix. default is all freqs equal +order is ARNDCQEGHILKMFPSTWYV +.HP +\fB\-q\fR, \fB\-\-aabasefreq\fR=\fI\,Input\/\fR AA frequencies, order: ARNDCQEGHILKMFPSTWYV +.TP +\fB\-c\fR, \fB\-\-protein\fR +run as amino acid +.TP +\fB\-n\fR, \fB\-\-nreps\fR=\fI\,INT\/\fR +number of replicates +.TP +\fB\-x\fR, \fB\-\-seed\fR=\fI\,INT\/\fR +random number seed, clock otherwise +.TP +\fB\-a\fR, \fB\-\-ancestors\fR +print the ancestral node sequences. default is no +use \fB\-p\fR for the nodes labels +.TP +\fB\-p\fR, \fB\-\-printnodelabels\fR +print newick with internal node labels. default is no +.TP +\fB\-m\fR, \fB\-\-multimodel\fR=\fI\,Input\/\fR specify multiple models across tree +input is as follows: +.TP +A<\->C,A<\->G,A<\->T,C<\->G,C<\->T,G<\->T,Node#,A<\->C,A<\->G,A<\->T,C<\->G,C<\->T,G<\->T +EX:.3,.3,.3,.3,.3,1,.3,.3,.2,.5,.4 +.TP +\fB\-k\fR, \fB\-\-rootseq\fR=\fI\,STRING\/\fR +set root sequence. default is random (from basefreqs) +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxstrec.1 b/mans/pxstrec.1 new file mode 100644 index 0000000..0e73e84 --- /dev/null +++ b/mans/pxstrec.1 @@ -0,0 +1,50 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXSTREC "1" "May 2018" "pxstrec 0.99+ds" "User Commands" +.SH NAME +pxstrec \- This will conduct state reconstruction analyses. +.SH SYNOPSIS +.B pxstrec +[\fI\,OPTION\/\fR]... [\fI\,FILE\/\fR]... +.SH DESCRIPTION +This will conduct state reconstruction analyses. +.TP +\fB\-d\fR, \fB\-\-dataf\fR=\fI\,FILE\/\fR +input data file +.TP +\fB\-w\fR, \fB\-\-datawide\fR +data is in wide format so (001 instead of 2) +.TP +\fB\-z\fR, \fB\-\-dataz\fR +data is in probability format (0,1,0,0) +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file +.TP +\fB\-c\fR, \fB\-\-conf\fR=\fI\,FILE\/\fR +configuration file +.TP +\fB\-o\fR, \fB\-\-outanc\fR=\fI\,FILE\/\fR +output file for ancestral calc +.HP +\fB\-n\fR, \fB\-\-outstnum\fR=\fI\,FILE\/\fR output file for stochastic mapping number +.HP +\fB\-a\fR, \fB\-\-outstnumany\fR=\fI\,FILE\/\fR output file for stochastic mapping number any +.HP +\fB\-m\fR, \fB\-\-outsttim\fR=\fI\,FILE\/\fR output file for stochastic mapping duration +.TP +\fB\-p\fR, \fB\-\-periods\fR=\fI\,NUMS\/\fR +comma separated times +.TP +\fB\-l\fR, \fB\-\-logf\fR=\fI\,FILE\/\fR +log file, stout otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxsw.1 b/mans/pxsw.1 new file mode 100644 index 0000000..44dd244 --- /dev/null +++ b/mans/pxsw.1 @@ -0,0 +1,45 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXSW "1" "May 2018" "pxsw 0.99+ds" "User Commands" +.SH NAME +pxsw \- Conduct Smith-Waterman analysis for all the seqs in a file. +.SH SYNOPSIS +.B pxsw +[\fI\,OPTION\/\fR]... [\fI\,FILE\/\fR]... +.SH DESCRIPTION +Conduct Smith\-Waterman analysis for all the seqs in a file. +This will take fasta, fastq, phylip, and nexus inputs. +Output is a list of the scores and distances (and the alignments +if asked). +Can read from stdin or file. +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output score/distance file, stout otherwise +.TP +\fB\-a\fR, \fB\-\-outalnf\fR=\fI\,FILE\/\fR +output sequence file, won't output otherwise +.TP +\fB\-t\fR, \fB\-\-seqtype\fR=\fI\,INT\/\fR +sequence type, default=DNA (DNA=0,AA=1) +.TP +\fB\-m\fR, \fB\-\-matrix\fR=\fI\,FILE\/\fR +scoring matrix, default DNA=EDNAFULL, AA=BLOSUM62 +.TP +\fB\-n\fR, \fB\-\-nthreads\fR=\fI\,INT\/\fR +number of threads (open mp), default=2 +.TP +\fB\-v\fR, \fB\-\-verbose\fR +make the output more verbose, turns off parallel +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxt2new.1 b/mans/pxt2new.1 new file mode 100644 index 0000000..6f0f245 --- /dev/null +++ b/mans/pxt2new.1 @@ -0,0 +1,27 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXT2NEW "1" "May 2018" "pxt2new 0.99+ds" "User Commands" +.SH NAME +pxt2new \- This will convert a tree file to newick. +.SH SYNOPSIS +.B pxt2new +[\fI\,OPTION\/\fR]... [\fI\,FILE\/\fR]... +.SH DESCRIPTION +This will convert a tree file to newick. +Can read from stdin or file. +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output tree file, stout otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxtlate.1 b/mans/pxtlate.1 new file mode 100644 index 0000000..f4c2ac4 --- /dev/null +++ b/mans/pxtlate.1 @@ -0,0 +1,35 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXTLATE "1" "May 2018" "pxtlate 0.99+ds" "User Commands" +.SH NAME +pxtlate \- Translate DNA alignment to amino acids. +.SH SYNOPSIS +.B pxtlate +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Translate DNA alignment to amino acids. +NOTE: assumes sequences are in frame. +This will take fasta, fastq, phylip, and nexus inputs. +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input nucleotide sequence file, stdin otherwise +.TP +\fB\-t\fR, \fB\-\-table\fR=\fI\,STRING\/\fR +which translation table to use. currently available: +\&'std' (standard, default) +\&'vmt' (vertebrate mtDNA) +\&'ivmt' (invertebrate mtDNA) +\&'ymt' (yeast mtDNA) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output aa sequence file, stout otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxtscale.1 b/mans/pxtscale.1 new file mode 100644 index 0000000..6c786ed --- /dev/null +++ b/mans/pxtscale.1 @@ -0,0 +1,32 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXTSCALE "1" "May 2018" "pxtscale 0.99+ds" "User Commands" +.SH NAME +pxtscale \- Tree rescaling by providing either scaling factor or root height. +.SH SYNOPSIS +.B pxtscale +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Tree rescaling by providing either scaling factor or root height. +This will take nexus and newick inputs. +.TP +\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR +input tree file, stdin otherwise +.TP +\fB\-s\fR, \fB\-\-scale\fR=\fI\,DOUBLE\/\fR +edge length scaling factor +.HP +\fB\-r\fR, \fB\-\-rootheight\fR=\fI\,DOUBLE\/\fR height of root (tree must be ultrametric) +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output file, stout otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxupgma.1 b/mans/pxupgma.1 new file mode 100644 index 0000000..0f16a91 --- /dev/null +++ b/mans/pxupgma.1 @@ -0,0 +1,27 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXUPGMA "1" "May 2018" "pxupgma 0.99+ds" "User Commands" +.SH NAME +pxupgma \- Basic UPGMA Tree Maker. +.SH SYNOPSIS +.B pxupgma +[\fI\,OPTION\/\fR]... +.SH DESCRIPTION +Basic UPGMA Tree Maker. +This will take fasta, fastq, phylip, and nexus inputs. +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input sequence file, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output newick file, stout otherwise +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/mans/pxvcf2fa.1 b/mans/pxvcf2fa.1 new file mode 100644 index 0000000..2a49ac8 --- /dev/null +++ b/mans/pxvcf2fa.1 @@ -0,0 +1,31 @@ +.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.6. +.TH PXVCF2FA "1" "May 2018" "pxvcf2fa 0.99+ds" "User Commands" +.SH NAME +pxvcf2fa \- Convert vcf file to fasta. +.SH SYNOPSIS +.B pxvcf2fa +[\fI\,OPTION\/\fR]... [\fI\,FILE\/\fR]... +.SH DESCRIPTION +Convert vcf file to fasta. +Currently only handles haploid data; phased data will come soon. +Can read from stdin or file. +.TP +\fB\-s\fR, \fB\-\-seqf\fR=\fI\,FILE\/\fR +input vcf file, stdin otherwise +.TP +\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR +output fasta sequence file, stout otherwise +.TP +\fB\-u\fR, \fB\-\-uppercase\fR +export characters in uppercase +.TP +\fB\-h\fR, \fB\-\-help\fR +display this help and exit +.TP +\fB\-V\fR, \fB\-\-version\fR +display version and exit +.SH "REPORTING BUGS" +Report bugs to: +phyx home page: +.SH AUTHOR +This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. diff --git a/patches/build-more-programs.patch b/patches/build-more-programs.patch new file mode 100644 index 0000000..c84c07c --- /dev/null +++ b/patches/build-more-programs.patch @@ -0,0 +1,14 @@ +Description: Also build and vendor pxupgma pxnj +Author: Nilesh Patra +Last-Update: 2021-07-10 +--- a/src/Makefile.in ++++ b/src/Makefile.in +@@ -357,7 +357,7 @@ + %.o: ./%.cpp ./%.h + $(CXX) $(CXXFLAGS) $(OPT_FLAGS) $(CPPFLAGS) $(LDFLAGS) -c -fmessage-length=0 -MMD -MP -MF "$(@:%.o=%.d)" -o "$@" "$<" + +-PROGS := pxaa2cdn pxbdsim pxboot pxbp pxcat pxclsq pxcltr pxcolt pxcomp pxconsq pxfqfilt pxlog pxlssq pxlstr pxmono pxmrca pxmrcacut pxmrcaname pxnw pxpoly pxrecode pxrevcomp pxrls pxrlt pxrmk pxrms pxrmt pxrr pxs2fa pxs2nex pxs2phy pxseqgen pxssort pxsstat pxsw pxt2new pxt2nex pxtcol pxtcomb pxtgen pxtlate pxtrt pxtscale pxvcf2fa $(NLOPT_PROGRAMS) ++PROGS := pxaa2cdn pxbdsim pxboot pxbp pxcat pxclsq pxcltr pxcolt pxcomp pxconsq pxfqfilt pxlog pxlssq pxlstr pxmono pxmrca pxmrcacut pxmrcaname pxnw pxpoly pxrecode pxrevcomp pxrls pxupgma pxrlt pxnj pxrmk pxrms pxrmt pxrr pxs2fa pxs2nex pxs2phy pxseqgen pxssort pxsstat pxsw pxt2new pxt2nex pxtcol pxtcomb pxtgen pxtlate pxtrt pxtscale pxvcf2fa $(NLOPT_PROGRAMS) + + # default all target + all: $(PROGS) diff --git a/patches/hardening.patch b/patches/hardening.patch new file mode 100644 index 0000000..cd62e62 --- /dev/null +++ b/patches/hardening.patch @@ -0,0 +1,344 @@ +Description: Propagate hardening options in the build +Author: Nilesh Patra +Last-Update: 2021-04-22 +--- a/src/Makefile.in ++++ b/src/Makefile.in +@@ -352,10 +352,10 @@ + #./state_reconstructor_simple.d \ + + main_%.o: ./main_%.cpp +- $(CXX) $(OPT_FLAGS) $(CPPFLAGS) $(LDFLAGS) -c -fmessage-length=0 -MMD -MP -MF "$(@:%.o=%.d)" -o "$@" "$<" ++ $(CXX) $(CXXFLAGS) $(OPT_FLAGS) $(CPPFLAGS) $(LDFLAGS) -c -fmessage-length=0 -MMD -MP -MF "$(@:%.o=%.d)" -o "$@" "$<" + + %.o: ./%.cpp ./%.h +- $(CXX) $(OPT_FLAGS) $(CPPFLAGS) $(LDFLAGS) -c -fmessage-length=0 -MMD -MP -MF "$(@:%.o=%.d)" -o "$@" "$<" ++ $(CXX) $(CXXFLAGS) $(OPT_FLAGS) $(CPPFLAGS) $(LDFLAGS) -c -fmessage-length=0 -MMD -MP -MF "$(@:%.o=%.d)" -o "$@" "$<" + + PROGS := pxaa2cdn pxbdsim pxboot pxbp pxcat pxclsq pxcltr pxcolt pxcomp pxconsq pxfqfilt pxlog pxlssq pxlstr pxmono pxmrca pxmrcacut pxmrcaname pxnw pxpoly pxrecode pxrevcomp pxrls pxrlt pxrmk pxrms pxrmt pxrr pxs2fa pxs2nex pxs2phy pxseqgen pxssort pxsstat pxsw pxt2new pxt2nex pxtcol pxtcomb pxtgen pxtlate pxtrt pxtscale pxvcf2fa $(NLOPT_PROGRAMS) + +@@ -366,102 +366,102 @@ + + pxlssq: $(CPP_OBJS) $(SEQ_OBJS) $(LS_SQ_OBJ) + @echo 'bulding pxlssq' +- $(CXX) -o "pxlssq" $(OPT_FLAGS) $(LS_SQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxlssq" $(OPT_FLAGS) $(LS_SQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxconsq: $(CPP_OBJS) $(SEQ_OBJS) $(CONSEQ_OBJ) + @echo 'building pxconsq' +- $(CXX) -o "pxconsq" $(OPT_FLAGS) $(CONSEQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxconsq" $(OPT_FLAGS) $(CONSEQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxclsq: $(CPP_OBJS) $(SEQ_OBJS) $(CLSQ_OBJ) + @echo 'building pxclsq' +- $(CXX) -o "pxclsq" $(OPT_FLAGS) $(CLSQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxclsq" $(OPT_FLAGS) $(CLSQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxrms: $(CPP_OBJS) $(SEQ_OBJS) $(RMS_OBJ) + @echo 'building pxrms' +- $(CXX) -o "pxrms" $(OPT_FLAGS) $(RMS_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxrms" $(OPT_FLAGS) $(RMS_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxaa2cdn: $(CPP_OBJS) $(SEQ_OBJS) $(AA2C_OBJ) + @echo 'building pxaa2cdn' +- $(CXX) -o "pxaa2cdn" $(OPT_FLAGS) $(AA2C_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxaa2cdn" $(OPT_FLAGS) $(AA2C_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxs2fa: $(CPP_OBJS) $(SEQ_OBJS) $(2FA_OBJ) + @echo 'building pxs2fa' +- $(CXX) -o "pxs2fa" $(OPT_FLAGS) $(2FA_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxs2fa" $(OPT_FLAGS) $(2FA_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxs2phy: $(CPP_OBJS) $(SEQ_OBJS) $(2PHY_OBJ) + @echo 'building pxs2phy' +- $(CXX) -o "pxs2phy" $(OPT_FLAGS) $(2PHY_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxs2phy" $(OPT_FLAGS) $(2PHY_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxs2nex: $(CPP_OBJS) $(SEQ_OBJS) $(2NEX_OBJ) + @echo 'building pxs2nex' +- $(CXX) -o "pxs2nex" $(OPT_FLAGS) $(2NEX_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxs2nex" $(OPT_FLAGS) $(2NEX_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxfqfilt: $(CPP_OBJS) $(SEQ_OBJS) $(FQFILT_OBJ) + @echo 'building pxfqfilt' +- $(CXX) -o "pxfqfilt" $(OPT_FLAGS) $(FQFILT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxfqfilt" $(OPT_FLAGS) $(FQFILT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxrevcomp: $(CPP_OBJS) $(SEQ_OBJS) $(REVCOMP_OBJ) + @echo 'building pxrevcomp' +- $(CXX) -o "pxrevcomp" $(OPT_FLAGS) $(REVCOMP_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxrevcomp" $(OPT_FLAGS) $(REVCOMP_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxnw: $(CPP_OBJS) $(SEQ_OBJS) $(NW_OBJ) + @echo 'building pxnw' +- $(CXX) -o "pxnw" $(OPT_FLAGS) $(NW_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxnw" $(OPT_FLAGS) $(NW_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxsw: $(CPP_OBJS) $(SEQ_OBJS) $(SW_OBJ) + @echo 'building pxsw' +- $(CXX) -o "pxsw" $(OPT_FLAGS) $(SW_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxsw" $(OPT_FLAGS) $(SW_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxboot: $(CPP_OBJS) $(SEQ_OBJS) $(SEQSAMP_OBJ) + @echo 'building pxboot' +- $(CXX) -o "pxboot" $(OPT_FLAGS) $(SEQSAMP_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxboot" $(OPT_FLAGS) $(SEQSAMP_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxtlate: $(CPP_OBJS) $(SEQ_OBJS) $(TLATE_OBJ) + @echo 'building pxtlate' +- $(CXX) -o "pxtlate" $(OPT_FLAGS) $(TLATE_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxtlate" $(OPT_FLAGS) $(TLATE_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxcat: $(CPP_OBJS) $(SEQ_OBJS) $(CONCAT_OBJ) + @echo 'building pxcat' +- $(CXX) -o "pxcat" $(OPT_FLAGS) $(CONCAT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxcat" $(OPT_FLAGS) $(CONCAT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxsstat: $(CPP_OBJS) $(SEQ_OBJS) $(SSTAT_OBJ) + @echo 'building pxsstat' +- $(CXX) -o "pxsstat" $(OPT_FLAGS) $(SSTAT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxsstat" $(OPT_FLAGS) $(SSTAT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxrecode: $(CPP_OBJS) $(SEQ_OBJS) $(SEQRECODE_OBJ) + @echo 'building pxrecode' +- $(CXX) -o "pxrecode" $(OPT_FLAGS) $(SEQRECODE_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxrecode" $(OPT_FLAGS) $(SEQRECODE_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxssort: $(CPP_OBJS) $(SEQ_OBJS) $(SSORT_OBJ) + @echo 'building pxssort' +- $(CXX) -o "pxssort" $(OPT_FLAGS) $(SSORT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxssort" $(OPT_FLAGS) $(SSORT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxcomp: $(CPP_OBJS) $(SEQ_OBJS) $(COMPTEST_OBJ) + @echo 'building pxcomp' +- $(CXX) -o "pxcomp" $(OPT_FLAGS) $(COMPTEST_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxcomp" $(OPT_FLAGS) $(COMPTEST_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxvcf2fa: $(CPP_OBJS) $(SEQ_OBJS) $(VCF2FA_OBJ) + @echo 'building pxvcf2fa' +- $(CXX) -o "pxvcf2fa" $(OPT_FLAGS) $(VCF2FA_OBJ) $(CPP_OBJS) $(SEQ_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxvcf2fa" $(OPT_FLAGS) $(VCF2FA_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + +@@ -469,117 +469,117 @@ + + pxbdsim: $(CPP_OBJS) $(TREE_OBJS) $(BD_SIM_OBJ) + @echo 'building pxbdsim' +- $(CXX) -o "pxbdsim" $(OPT_FLAGS) $(BD_SIM_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxbdsim" $(OPT_FLAGS) $(BD_SIM_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxbdfit: $(CPP_OBJS) $(TREE_OBJS) $(BD_FIT_OBJ) + @echo 'building pxbdfit' +- $(CXX) -o "pxbdfit" $(OPT_FLAGS) $(BD_FIT_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) ++ $(CXX) $(CXXFLAGS) -o "pxbdfit" $(OPT_FLAGS) $(BD_FIT_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) + cat man/$@.1.in > man/$@.1 + + pxnni: $(CPP_OBJS) $(TREE_OBJS) $(NNI_OBJ) + @echo 'building pxnni' +- $(CXX) -o "pxnni" $(OPT_FLAGS) $(NNI_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) ++ $(CXX) $(CXXFLAGS) -o "pxnni" $(OPT_FLAGS) $(NNI_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) + cat man/$@.1.in > man/$@.1 + + pxlstr: $(CPP_OBJS) $(TREE_OBJS) $(LS_TR_OBJ) + @echo 'building pxlstr' +- $(CXX) -o "pxlstr" $(OPT_FLAGS) $(LS_TR_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxlstr" $(OPT_FLAGS) $(LS_TR_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxmrca: $(CPP_OBJS) $(TREE_OBJS) $(MRCA_OBJ) + @echo 'building pxmrca' +- $(CXX) -o "pxmrca" $(OPT_FLAGS) $(MRCA_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxmrca" $(OPT_FLAGS) $(MRCA_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxmrcacut: $(CPP_OBJS) $(TREE_OBJS) $(MRCACUT_OBJ) + @echo 'building pxmrcacut' +- $(CXX) -o "pxmrcacut" $(OPT_FLAGS) $(MRCACUT_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxmrcacut" $(OPT_FLAGS) $(MRCACUT_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxmrcaname: $(CPP_OBJS) $(TREE_OBJS) $(MRCANAME_OBJ) + @echo 'building pxmrcaname' +- $(CXX) -o "pxmrcaname" $(OPT_FLAGS) $(MRCANAME_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxmrcaname" $(OPT_FLAGS) $(MRCANAME_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxcltr: $(CPP_OBJS) $(TREE_OBJS) $(CLTR_OBJ) + @echo 'building pxcltr' +- $(CXX) -o "pxcltr" $(OPT_FLAGS) $(CLTR_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxcltr" $(OPT_FLAGS) $(CLTR_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxt2new: $(CPP_OBJS) $(TREE_OBJS) $(T2NEW_OBJ) + @echo 'building pxt2new' +- $(CXX) -o "pxt2new" $(OPT_FLAGS) $(T2NEW_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxt2new" $(OPT_FLAGS) $(T2NEW_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxt2nex: $(CPP_OBJS) $(TREE_OBJS) $(T2NEX_OBJ) + @echo 'building pxt2nex' +- $(CXX) -o "pxt2nex" $(OPT_FLAGS) $(T2NEX_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxt2nex" $(OPT_FLAGS) $(T2NEX_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxrr: $(CPP_OBJS) $(TREE_OBJS) $(RR_OBJ) + @echo 'building pxrr' +- $(CXX) -o "pxrr" $(OPT_FLAGS) $(RR_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxrr" $(OPT_FLAGS) $(RR_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxmono: $(CPP_OBJS) $(TREE_OBJS) $(MONO_OBJ) + @echo 'building pxmono' +- $(CXX) -o "pxmono" $(OPT_FLAGS) $(MONO_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxmono" $(OPT_FLAGS) $(MONO_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxrmt: $(CPP_OBJS) $(TREE_OBJS) $(RMT_OBJ) + @echo 'building pxrmt' +- $(CXX) -o "pxrmt" $(OPT_FLAGS) $(RMT_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxrmt" $(OPT_FLAGS) $(RMT_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxtrt: $(CPP_OBJS) $(TREE_OBJS) $(TRT_OBJ) + @echo 'building pxtrt' +- $(CXX) -o "pxtrt" $(OPT_FLAGS) $(TRT_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxtrt" $(OPT_FLAGS) $(TRT_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxrmk: $(CPP_OBJS) $(TREE_OBJS) $(RMK_OBJ) + @echo 'building pxrmk' +- $(CXX) -o "pxrmk" $(OPT_FLAGS) $(RMK_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxrmk" $(OPT_FLAGS) $(RMK_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxlog: $(CPP_OBJS) $(TREE_OBJS) $(LOGMANIP_OBJ) + @echo 'building pxlog' +- $(CXX) -o "pxlog" $(OPT_FLAGS) $(LOGMANIP_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxlog" $(OPT_FLAGS) $(LOGMANIP_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxtscale: $(CPP_OBJS) $(TREE_OBJS) $(RESCALE_TREE_OBJ) + @echo 'building pxtscale' +- $(CXX) -o "pxtscale" $(OPT_FLAGS) $(RESCALE_TREE_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxtscale" $(OPT_FLAGS) $(RESCALE_TREE_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxtcol: $(CPP_OBJS) $(TREE_OBJS) $(TCOL_OBJ) + @echo 'building pxtcol' +- $(CXX) -o "pxtcol" $(OPT_FLAGS) $(TCOL_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxtcol" $(OPT_FLAGS) $(TCOL_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxtcomb: $(CPP_OBJS) $(TREE_OBJS) $(TCOMB_OBJ) + @echo 'building pxtcomb' +- $(CXX) -o "pxtcomb" $(OPT_FLAGS) $(TCOMB_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxtcomb" $(OPT_FLAGS) $(TCOMB_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxtgen: $(CPP_OBJS) $(TREE_OBJS) $(TGEN_OBJ) + @echo 'building pxtgen' +- $(CXX) -o "pxtgen" $(OPT_FLAGS) $(TGEN_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxtgen" $(OPT_FLAGS) $(TGEN_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxpoly: $(CPP_OBJS) $(TREE_OBJS) $(POLY_OBJ) + @echo 'building pxpoly' +- $(CXX) -o "pxpoly" $(OPT_FLAGS) $(POLY_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxpoly" $(OPT_FLAGS) $(POLY_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxcolt: $(CPP_OBJS) $(TREE_OBJS) $(COLLAPSE_TREE_OBJ) + @echo 'building pxcolt' +- $(CXX) -o "pxcolt" $(OPT_FLAGS) $(COLLAPSE_TREE_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxcolt" $(OPT_FLAGS) $(COLLAPSE_TREE_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxbp: $(CPP_OBJS) $(TREE_OBJS) $(BP_OBJ) + @echo 'building pxbp' +- $(CXX) -o "pxbp" $(OPT_FLAGS) $(BP_OBJ) $(CPP_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxbp" $(OPT_FLAGS) $(BP_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + +@@ -587,22 +587,22 @@ + + pxrls: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RELABEL_SEQ_OBJ) + @echo 'building pxrls' +- $(CXX) -o "pxrls" $(OPT_FLAGS) $(RELABEL_SEQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxrls" $(OPT_FLAGS) $(RELABEL_SEQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxrlt: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RELABEL_TREE_OBJ) + @echo 'building pxrlt' +- $(CXX) -o "pxrlt" $(OPT_FLAGS) $(RELABEL_TREE_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxrlt" $(OPT_FLAGS) $(RELABEL_TREE_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxupgma: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(UPGMA_OBJ) + @echo 'building pxupgma' +- $(CXX) -o "pxupgma" $(OPT_FLAGS) $(UPGMA_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxupgma" $(OPT_FLAGS) $(UPGMA_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + pxnj: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(NJ_OBJ) + @echo 'building pxnj' +- $(CXX) -o "pxnj" $(OPT_FLAGS) $(NJ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) ++ $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxnj" $(OPT_FLAGS) $(NJ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(LDFLAGS) + cat man/$@.1.in > man/$@.1 + + +@@ -610,17 +610,17 @@ + + pxseqgen: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RATE_OBJS) $(SEQGEN_OBJ) $(FORT_OBJS) + @echo 'building pxseqgen' +- $(CXX) -o "pxseqgen" $(OPT_FLAGS) $(SEQGEN_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RATE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) ++ $(CXX) $(CXXFLAGS) -o "pxseqgen" $(OPT_FLAGS) $(SEQGEN_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RATE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) + cat man/$@.1.in > man/$@.1 + + pxcontrates: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(CONTRATES_OBJ) $(RATE_OBJS) + @echo 'building pxcontrates' +- $(CXX) -o "pxcontrates" $(OPT_FLAGS) $(CONTRATES_OBJ) $(RATE_OBJS) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) ++ $(CXX) $(CXXFLAGS) -o "pxcontrates" $(OPT_FLAGS) $(CONTRATES_OBJ) $(RATE_OBJS) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) + cat man/$@.1.in > man/$@.1 + + pxstrec: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RATE_OBJS) $(STREC_OBJ) #$(FORT_OBJS) + @echo 'building pxstrec' +- $(CXX) -o "pxstrec" $(OPT_FLAGS) $(STREC_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RATE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) #$(FORT_OBJS) -lgfortran ++ $(CXX) $(CXXFLAGS) -o "pxstrec" $(OPT_FLAGS) $(STREC_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RATE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) #$(FORT_OBJS) -lgfortran + cat man/$@.1.in > man/$@.1 + + +@@ -628,11 +628,11 @@ + #removing until fortran update + #pxsm0: $(CPP_OBJS) $(RATE_OBJS) $(SM0_OBJ) $(FORT_OBJS) + # @echo 'building pxsm0' +-# $(CXX) -o "pxsm0" $(OPT_FLAGS) $(SM0_OBJ) $(CPP_OBJS) $(RATE_OBJS) $(FORT_OBJS) $(CPP_LIBS) -lgfortran ++# $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxsm0" $(OPT_FLAGS) $(SM0_OBJ) $(CPP_OBJS) $(RATE_OBJS) $(FORT_OBJS) $(CPP_LIBS) -lgfortran + + #pxsm2a: $(CPP_OBJS) $(RATE_OBJS) $(SM2A_OBJ) $(FORT_OBJS) + # @echo 'building pxsm2a' +-# $(CXX) -o "pxsm2a" $(OPT_FLAGS) $(SM2A_OBJ) $(CPP_OBJS) $(RATE_OBJS) $(FORT_OBJS) $(CPP_LIBS) -lgfortran ++# $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxsm2a" $(OPT_FLAGS) $(SM2A_OBJ) $(CPP_OBJS) $(RATE_OBJS) $(FORT_OBJS) $(CPP_LIBS) -lgfortran + + + diff --git a/patches/i386.patch b/patches/i386.patch new file mode 100644 index 0000000..50091bc --- /dev/null +++ b/patches/i386.patch @@ -0,0 +1,22 @@ +Description: fix "nan" test failures on i386 caused by -ffast-math +Author: Étienne Mollier +Bug: https://github.com/FePhyFoFum/phyx/issues/145#issuecomment-824866619 +Last-Update: 2022-04-14 +--- +This patch header follows DEP-3: http://dep.debian.net/deps/dep3/ +--- phyx.orig/src/Makefile.in ++++ phyx/src/Makefile.in +@@ -32,7 +32,12 @@ + endif + + ifneq "$(CXX)" "icc" +- OPT_FLAGS += -ffast-math -ftree-vectorize ++ OPT_FLAGS += -ftree-vectorize ++ ifneq ($(filter @host_cpu@,i386 i486 i586 i686),) ++ OPT_FLAGS += -ffloat-store ++ else ++ OPT_FLAGS += -ffast-math ++ endif + endif + + NLOPT_PROGRAMS := diff --git a/patches/series b/patches/series new file mode 100644 index 0000000..70dd5c1 --- /dev/null +++ b/patches/series @@ -0,0 +1,3 @@ +hardening.patch +build-more-programs.patch +i386.patch diff --git a/phyx.logfile b/phyx.logfile new file mode 100644 index 0000000..e4382ac --- /dev/null +++ b/phyx.logfile @@ -0,0 +1,2 @@ +pxaa2cdn +pxaa2cdn --help diff --git a/rules b/rules new file mode 100755 index 0000000..ba3668e --- /dev/null +++ b/rules @@ -0,0 +1,35 @@ +#!/usr/bin/make -f + +# DH_VERBOSE := 1 +export LC_ALL=C.UTF-8 + +include /usr/share/dpkg/default.mk +export DEB_BUILD_MAINT_OPTIONS = hardening=+all + +ifneq (,$(filter $(DEB_BUILD_ARCH),i386)) +export DEB_CXXFLAGS_MAINT_APPEND += -ffloat-store +endif + + +%: + dh $@ --sourcedirectory=src + +override_dh_auto_test: +ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS))) + cd src && python3 run_tests.py +endif + +override_dh_auto_install: + mkdir -p $(CURDIR)/debian/$(DEB_SOURCE)/usr/bin + dh_auto_install -- PREFIX=$(CURDIR)/debian/$(DEB_SOURCE)/usr + #echo "#!/usr/bin/python3" > $(CURDIR)/debian/$(DEB_SOURCE)/usr/bin/Phyx_Gui + #cat src/Phyx_Gui.py >> $(CURDIR)/debian/$(DEB_SOURCE)/usr/bin/Phyx_Gui + +override_dh_compress: + dh_compress --exclude=.pdf + +override_dh_auto_clean: + rm -rf src/phyx.logfile + if [ -r src/Makefile ]; then \ + $(MAKE) -C src distclean; \ + fi diff --git a/salsa-ci.yml b/salsa-ci.yml new file mode 100644 index 0000000..33c3a64 --- /dev/null +++ b/salsa-ci.yml @@ -0,0 +1,4 @@ +--- +include: + - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml + - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml diff --git a/source/format b/source/format new file mode 100644 index 0000000..163aaf8 --- /dev/null +++ b/source/format @@ -0,0 +1 @@ +3.0 (quilt) diff --git a/tests/control b/tests/control new file mode 100644 index 0000000..d2aa55a --- /dev/null +++ b/tests/control @@ -0,0 +1,3 @@ +Tests: run-unit-test +Depends: @ +Restrictions: allow-stderr diff --git a/tests/run-unit-test b/tests/run-unit-test new file mode 100644 index 0000000..dfbf82d --- /dev/null +++ b/tests/run-unit-test @@ -0,0 +1,99 @@ +#!/bin/bash + +# Remark: Considere running runtime test suite which is different from +# this one which is based on the docs. If this would be implemented +# we should probably ship all example data and doc in a separate +# phyx-doc package + +set -e + +pkg=phyx + +if [ "${AUTOPKGTEST_TMP}" = "" ] ; then + AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX) + trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM +fi + +cp -a /usr/share/doc/${pkg}/examples/* "${AUTOPKGTEST_TMP}" + +cd "${AUTOPKGTEST_TMP}" + +cd pxaa2cdn_example && echo pxaa2cdn && pxaa2cdn -a ND6_aa.fa -n ND6_nuc.fa -o CDN_aln.fa >/dev/null && cd .. + +cd pxbdfit_example && echo pxbdfit && pxbdfit -t bd.tre -m yule >/dev/null && cd .. + +# cd pxbdsim_example && echo pxbdsim && pxbdsim -e 100 -s -b 1 -d 0.5 -o output_tree_file >/dev/null && cd .. + +cd pxboot_example && echo pxboot && pxboot -s Alignment -x 112233 -f 0.50 -o output_of_50_jackknife >/dev/null && cd .. + +cd pxboot_example && echo pxboot && pxboot -s Alignment -p parts -o output_of_bootstrap >/dev/null && cd .. + +cd pxbp_example && echo pxbp && pxbp -t Tree.tre -o bp_output >/dev/null && cd .. + +cd pxcat_example && echo pxcat && pxcat -s *.fas *.fa *.phy -p Parts.txt -o Supermatrix.fa >/dev/null && cd .. + +cd pxclsq_example && echo pxclsq && pxclsq -s Alignment -p 0.6 >/dev/null && cd .. + +cd pxconsq_example && echo pxconsq && pxconsq -s Alignment >/dev/null && cd .. + +cd pxcontrates_example && echo pxcontrates && pxcontrates -c contrates_file.txt -t contrates_tree.tre -a 1 >/dev/null 2>/dev/null && cd .. + +cd pxfqfilt_example && echo pxfqfilt && pxfqfilt -s fqfilt_test.fastq -m 10 >/dev/null && cd .. + +cd pxlog_example && echo pxlog && pxlog -t *.trees -i >/dev/null && cd .. + +cd pxlog_example && echo pxlog && pxlog -t *.trees -b 75 -n 2 -o some_output_filename >/dev/null && cd .. + +cd pxlssq_example && echo pxlssq && pxlssq -s Alignment >/dev/null && cd .. + +cd pxlstr_example && echo pxlstr && pxlstr -t Tree.tre >/dev/null && cd .. + +cd pxmrca_example && echo pxmrca && pxmrca -t mrca_test.tre -m mrca.txt >/dev/null && cd .. + +cd pxmrcacut_example && echo pxmrcacut && pxmrcacut -t mrca_test.tre -m mrca.txt >/dev/null && cd .. + +cd pxmrcaname_example && echo pxmrcaname && pxmrcaname -t mrca_test.tre -m mrca.txt >/dev/null && cd .. + +cd pxnj_example && echo pxnj && pxnj -s Alignment.aln >/dev/null && cd .. + +cd pxnw_examples && echo pxnw && pxnw -s Alignment.aln >/dev/null && cd .. + +cd pxrecode_example && echo pxrecode && pxrecode -s Nucleotide.fa >/dev/null && cd .. + +cd pxrevcomp_example && echo pxrevcomp && pxrevcomp -s Nucleotide.fa >/dev/null && cd .. + +cd pxrls_example && echo pxrls && pxrls -s test.fa -c oldnames.txt -n newnames.txt >/dev/null && cd .. + +cd pxrlt_example && echo pxrlt && pxrlt -t kingdoms.tre -c kingdoms.oldnames.txt -n kingdoms.newnames.txt >/dev/null && cd .. + +cd pxrms_example && echo pxrms && pxrms -s Nucleotide.fa -f taxa_to_delete.txt >/dev/null && cd .. + +cd pxrmt_example && echo pxrmt && pxrmt -t rmt_test.tre -n s1,s6,s8 >/dev/null && cd .. + +cd pxrr_example && echo pxrr && pxrr -t rr_test.tre -g s1,s2 >/dev/null && cd .. + +cd pxs2fa_pxs2phy_pxs2nex_example && \ + echo pxs2fa && pxs2fa -s Alignment >/dev/null && \ + echo pxs2phy && pxs2phy -s Alignment >/dev/null && \ + echo pxs2nex && pxs2nex -s Alignment >/dev/null && \ + cd .. + +cd pxseqgen_example && echo pxseqgen && pxseqgen -t seqgen_test.tre >/dev/null && cd .. + +cd pxseqgen_example && echo pxseqgen && pxseqgen -t seqgen_test.tre -o output_alignment -m .33,.33,.33,.33,.33,.33,2,.3,.3,.2,.5,.4,.2 >/dev/null && cd .. + +cd pxsstat_example && echo pxsstat && pxsstat -s Bollback_2002_MBE.fa >/dev/null && cd .. + +cd pxstrec_example && echo pxstrec && pxstrec -d test.data.narrow -t test.tre -c config_stmap >/dev/null && cd .. + +cd pxsw_example && echo pxsw && pxsw -s Alignment.fa >/dev/null && cd .. + +cd pxt2new_example && echo pxt2new && pxt2new -t Tree.nex >/dev/null && cd .. + +cd pxtlate_example && echo pxtlate && pxtlate -s Sequence.fa >/dev/null && cd .. + +cd pxtscale_example && echo pxtscale && pxtscale -t ultra.tre -s 2.0 >/dev/null && cd .. + +cd pxupgma_example && echo pxupgma && pxupgma -s drosophila.aln >/dev/null && cd .. + +cd pxvcf2fa_example && echo pxvcf2fa && pxvcf2fa -s vcf_file >/dev/null && cd .. diff --git a/upstream/metadata b/upstream/metadata new file mode 100644 index 0000000..f809f28 --- /dev/null +++ b/upstream/metadata @@ -0,0 +1,10 @@ +--- +Archive: GitHub +Bug-Database: https://github.com/FePhyFoFum/phyx/issues +Bug-Submit: https://github.com/FePhyFoFum/phyx/issues/new +Changelog: https://github.com/FePhyFoFum/phyx/tags +Repository: https://github.com/FePhyFoFum/phyx.git +Repository-Browse: https://github.com/FePhyFoFum/phyx +Registry: + - Name: OMICtools + Entry: OMICS_02387 diff --git a/watch b/watch new file mode 100644 index 0000000..b596afd --- /dev/null +++ b/watch @@ -0,0 +1,5 @@ +version=4 + +opts="repacksuffix=+ds,dversionmangle=s%\+ds\d*$%%,filenamemangle=s%(?:.*?)?v?(\d[\d.]*)\.tar\.gz%phyx-$1.tar.gz%" \ + https://github.com/FePhyFoFum/phyx/tags \ + (?:.*?/)?v?(\d[\d.]*)\.tar\.gz -- cgit v1.2.3 From 7d8ca650879bf3f2f89b53edc3f395aa9f0ed453 Mon Sep 17 00:00:00 2001 From: Nilesh Patra Date: Tue, 15 Nov 2022 07:43:33 +0100 Subject: Propagate hardening options in the build Last-Update: 2021-04-22 Gbp-Pq: Name hardening.patch --- src/Makefile.in | 108 ++++++++++++++++++++++++++++---------------------------- 1 file changed, 54 insertions(+), 54 deletions(-) diff --git a/src/Makefile.in b/src/Makefile.in index 1fe0f83..0cc6088 100644 --- a/src/Makefile.in +++ b/src/Makefile.in @@ -352,10 +352,10 @@ RATE_DEPS += \ #./state_reconstructor_simple.d \ main_%.o: ./main_%.cpp - $(CXX) $(OPT_FLAGS) $(CPPFLAGS) $(LDFLAGS) -c -fmessage-length=0 -MMD -MP -MF "$(@:%.o=%.d)" -o "$@" "$<" + $(CXX) $(CXXFLAGS) $(OPT_FLAGS) $(CPPFLAGS) $(LDFLAGS) -c -fmessage-length=0 -MMD -MP -MF "$(@:%.o=%.d)" -o "$@" "$<" %.o: ./%.cpp ./%.h - $(CXX) $(OPT_FLAGS) $(CPPFLAGS) $(LDFLAGS) -c -fmessage-length=0 -MMD -MP -MF "$(@:%.o=%.d)" -o "$@" "$<" + $(CXX) $(CXXFLAGS) $(OPT_FLAGS) $(CPPFLAGS) $(LDFLAGS) -c -fmessage-length=0 -MMD -MP -MF "$(@:%.o=%.d)" -o "$@" "$<" PROGS := pxaa2cdn pxbdsim pxboot pxbp pxcat pxclsq pxcltr pxcolt pxcomp pxconsq pxfqfilt pxlog pxlssq pxlstr pxmono pxmrca pxmrcacut pxmrcaname pxnw pxpoly pxrecode pxrevcomp pxrls pxrlt pxrmk pxrms pxrmt pxrr pxs2fa pxs2nex pxs2phy pxseqgen pxssort pxsstat pxsw pxt2new pxt2nex pxtcol pxtcomb pxtgen pxtlate pxtrt pxtscale pxvcf2fa $(NLOPT_PROGRAMS) @@ -366,102 +366,102 @@ all: $(PROGS) pxlssq: $(CPP_OBJS) $(SEQ_OBJS) $(LS_SQ_OBJ) @echo 'bulding pxlssq' - $(CXX) -o "pxlssq" $(OPT_FLAGS) $(LS_SQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxlssq" $(OPT_FLAGS) $(LS_SQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxconsq: $(CPP_OBJS) $(SEQ_OBJS) $(CONSEQ_OBJ) @echo 'building pxconsq' - $(CXX) -o "pxconsq" $(OPT_FLAGS) $(CONSEQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxconsq" $(OPT_FLAGS) $(CONSEQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxclsq: $(CPP_OBJS) $(SEQ_OBJS) $(CLSQ_OBJ) @echo 'building pxclsq' - $(CXX) -o "pxclsq" $(OPT_FLAGS) $(CLSQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxclsq" $(OPT_FLAGS) $(CLSQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxrms: $(CPP_OBJS) $(SEQ_OBJS) $(RMS_OBJ) @echo 'building pxrms' - $(CXX) -o "pxrms" $(OPT_FLAGS) $(RMS_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxrms" $(OPT_FLAGS) $(RMS_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxaa2cdn: $(CPP_OBJS) $(SEQ_OBJS) $(AA2C_OBJ) @echo 'building pxaa2cdn' - $(CXX) -o "pxaa2cdn" $(OPT_FLAGS) $(AA2C_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxaa2cdn" $(OPT_FLAGS) $(AA2C_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxs2fa: $(CPP_OBJS) $(SEQ_OBJS) $(2FA_OBJ) @echo 'building pxs2fa' - $(CXX) -o "pxs2fa" $(OPT_FLAGS) $(2FA_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxs2fa" $(OPT_FLAGS) $(2FA_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxs2phy: $(CPP_OBJS) $(SEQ_OBJS) $(2PHY_OBJ) @echo 'building pxs2phy' - $(CXX) -o "pxs2phy" $(OPT_FLAGS) $(2PHY_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxs2phy" $(OPT_FLAGS) $(2PHY_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxs2nex: $(CPP_OBJS) $(SEQ_OBJS) $(2NEX_OBJ) @echo 'building pxs2nex' - $(CXX) -o "pxs2nex" $(OPT_FLAGS) $(2NEX_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxs2nex" $(OPT_FLAGS) $(2NEX_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxfqfilt: $(CPP_OBJS) $(SEQ_OBJS) $(FQFILT_OBJ) @echo 'building pxfqfilt' - $(CXX) -o "pxfqfilt" $(OPT_FLAGS) $(FQFILT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxfqfilt" $(OPT_FLAGS) $(FQFILT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxrevcomp: $(CPP_OBJS) $(SEQ_OBJS) $(REVCOMP_OBJ) @echo 'building pxrevcomp' - $(CXX) -o "pxrevcomp" $(OPT_FLAGS) $(REVCOMP_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxrevcomp" $(OPT_FLAGS) $(REVCOMP_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxnw: $(CPP_OBJS) $(SEQ_OBJS) $(NW_OBJ) @echo 'building pxnw' - $(CXX) -o "pxnw" $(OPT_FLAGS) $(NW_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxnw" $(OPT_FLAGS) $(NW_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxsw: $(CPP_OBJS) $(SEQ_OBJS) $(SW_OBJ) @echo 'building pxsw' - $(CXX) -o "pxsw" $(OPT_FLAGS) $(SW_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxsw" $(OPT_FLAGS) $(SW_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxboot: $(CPP_OBJS) $(SEQ_OBJS) $(SEQSAMP_OBJ) @echo 'building pxboot' - $(CXX) -o "pxboot" $(OPT_FLAGS) $(SEQSAMP_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxboot" $(OPT_FLAGS) $(SEQSAMP_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxtlate: $(CPP_OBJS) $(SEQ_OBJS) $(TLATE_OBJ) @echo 'building pxtlate' - $(CXX) -o "pxtlate" $(OPT_FLAGS) $(TLATE_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxtlate" $(OPT_FLAGS) $(TLATE_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxcat: $(CPP_OBJS) $(SEQ_OBJS) $(CONCAT_OBJ) @echo 'building pxcat' - $(CXX) -o "pxcat" $(OPT_FLAGS) $(CONCAT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxcat" $(OPT_FLAGS) $(CONCAT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxsstat: $(CPP_OBJS) $(SEQ_OBJS) $(SSTAT_OBJ) @echo 'building pxsstat' - $(CXX) -o "pxsstat" $(OPT_FLAGS) $(SSTAT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxsstat" $(OPT_FLAGS) $(SSTAT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxrecode: $(CPP_OBJS) $(SEQ_OBJS) $(SEQRECODE_OBJ) @echo 'building pxrecode' - $(CXX) -o "pxrecode" $(OPT_FLAGS) $(SEQRECODE_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxrecode" $(OPT_FLAGS) $(SEQRECODE_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxssort: $(CPP_OBJS) $(SEQ_OBJS) $(SSORT_OBJ) @echo 'building pxssort' - $(CXX) -o "pxssort" $(OPT_FLAGS) $(SSORT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxssort" $(OPT_FLAGS) $(SSORT_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxcomp: $(CPP_OBJS) $(SEQ_OBJS) $(COMPTEST_OBJ) @echo 'building pxcomp' - $(CXX) -o "pxcomp" $(OPT_FLAGS) $(COMPTEST_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxcomp" $(OPT_FLAGS) $(COMPTEST_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxvcf2fa: $(CPP_OBJS) $(SEQ_OBJS) $(VCF2FA_OBJ) @echo 'building pxvcf2fa' - $(CXX) -o "pxvcf2fa" $(OPT_FLAGS) $(VCF2FA_OBJ) $(CPP_OBJS) $(SEQ_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxvcf2fa" $(OPT_FLAGS) $(VCF2FA_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 @@ -469,117 +469,117 @@ pxvcf2fa: $(CPP_OBJS) $(SEQ_OBJS) $(VCF2FA_OBJ) pxbdsim: $(CPP_OBJS) $(TREE_OBJS) $(BD_SIM_OBJ) @echo 'building pxbdsim' - $(CXX) -o "pxbdsim" $(OPT_FLAGS) $(BD_SIM_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxbdsim" $(OPT_FLAGS) $(BD_SIM_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxbdfit: $(CPP_OBJS) $(TREE_OBJS) $(BD_FIT_OBJ) @echo 'building pxbdfit' - $(CXX) -o "pxbdfit" $(OPT_FLAGS) $(BD_FIT_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) + $(CXX) $(CXXFLAGS) -o "pxbdfit" $(OPT_FLAGS) $(BD_FIT_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) cat man/$@.1.in > man/$@.1 pxnni: $(CPP_OBJS) $(TREE_OBJS) $(NNI_OBJ) @echo 'building pxnni' - $(CXX) -o "pxnni" $(OPT_FLAGS) $(NNI_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) + $(CXX) $(CXXFLAGS) -o "pxnni" $(OPT_FLAGS) $(NNI_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) cat man/$@.1.in > man/$@.1 pxlstr: $(CPP_OBJS) $(TREE_OBJS) $(LS_TR_OBJ) @echo 'building pxlstr' - $(CXX) -o "pxlstr" $(OPT_FLAGS) $(LS_TR_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxlstr" $(OPT_FLAGS) $(LS_TR_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxmrca: $(CPP_OBJS) $(TREE_OBJS) $(MRCA_OBJ) @echo 'building pxmrca' - $(CXX) -o "pxmrca" $(OPT_FLAGS) $(MRCA_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxmrca" $(OPT_FLAGS) $(MRCA_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxmrcacut: $(CPP_OBJS) $(TREE_OBJS) $(MRCACUT_OBJ) @echo 'building pxmrcacut' - $(CXX) -o "pxmrcacut" $(OPT_FLAGS) $(MRCACUT_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxmrcacut" $(OPT_FLAGS) $(MRCACUT_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxmrcaname: $(CPP_OBJS) $(TREE_OBJS) $(MRCANAME_OBJ) @echo 'building pxmrcaname' - $(CXX) -o "pxmrcaname" $(OPT_FLAGS) $(MRCANAME_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxmrcaname" $(OPT_FLAGS) $(MRCANAME_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxcltr: $(CPP_OBJS) $(TREE_OBJS) $(CLTR_OBJ) @echo 'building pxcltr' - $(CXX) -o "pxcltr" $(OPT_FLAGS) $(CLTR_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxcltr" $(OPT_FLAGS) $(CLTR_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxt2new: $(CPP_OBJS) $(TREE_OBJS) $(T2NEW_OBJ) @echo 'building pxt2new' - $(CXX) -o "pxt2new" $(OPT_FLAGS) $(T2NEW_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxt2new" $(OPT_FLAGS) $(T2NEW_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxt2nex: $(CPP_OBJS) $(TREE_OBJS) $(T2NEX_OBJ) @echo 'building pxt2nex' - $(CXX) -o "pxt2nex" $(OPT_FLAGS) $(T2NEX_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxt2nex" $(OPT_FLAGS) $(T2NEX_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxrr: $(CPP_OBJS) $(TREE_OBJS) $(RR_OBJ) @echo 'building pxrr' - $(CXX) -o "pxrr" $(OPT_FLAGS) $(RR_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxrr" $(OPT_FLAGS) $(RR_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxmono: $(CPP_OBJS) $(TREE_OBJS) $(MONO_OBJ) @echo 'building pxmono' - $(CXX) -o "pxmono" $(OPT_FLAGS) $(MONO_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxmono" $(OPT_FLAGS) $(MONO_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxrmt: $(CPP_OBJS) $(TREE_OBJS) $(RMT_OBJ) @echo 'building pxrmt' - $(CXX) -o "pxrmt" $(OPT_FLAGS) $(RMT_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxrmt" $(OPT_FLAGS) $(RMT_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxtrt: $(CPP_OBJS) $(TREE_OBJS) $(TRT_OBJ) @echo 'building pxtrt' - $(CXX) -o "pxtrt" $(OPT_FLAGS) $(TRT_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxtrt" $(OPT_FLAGS) $(TRT_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxrmk: $(CPP_OBJS) $(TREE_OBJS) $(RMK_OBJ) @echo 'building pxrmk' - $(CXX) -o "pxrmk" $(OPT_FLAGS) $(RMK_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxrmk" $(OPT_FLAGS) $(RMK_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxlog: $(CPP_OBJS) $(TREE_OBJS) $(LOGMANIP_OBJ) @echo 'building pxlog' - $(CXX) -o "pxlog" $(OPT_FLAGS) $(LOGMANIP_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxlog" $(OPT_FLAGS) $(LOGMANIP_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxtscale: $(CPP_OBJS) $(TREE_OBJS) $(RESCALE_TREE_OBJ) @echo 'building pxtscale' - $(CXX) -o "pxtscale" $(OPT_FLAGS) $(RESCALE_TREE_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxtscale" $(OPT_FLAGS) $(RESCALE_TREE_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxtcol: $(CPP_OBJS) $(TREE_OBJS) $(TCOL_OBJ) @echo 'building pxtcol' - $(CXX) -o "pxtcol" $(OPT_FLAGS) $(TCOL_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxtcol" $(OPT_FLAGS) $(TCOL_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxtcomb: $(CPP_OBJS) $(TREE_OBJS) $(TCOMB_OBJ) @echo 'building pxtcomb' - $(CXX) -o "pxtcomb" $(OPT_FLAGS) $(TCOMB_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxtcomb" $(OPT_FLAGS) $(TCOMB_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxtgen: $(CPP_OBJS) $(TREE_OBJS) $(TGEN_OBJ) @echo 'building pxtgen' - $(CXX) -o "pxtgen" $(OPT_FLAGS) $(TGEN_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxtgen" $(OPT_FLAGS) $(TGEN_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxpoly: $(CPP_OBJS) $(TREE_OBJS) $(POLY_OBJ) @echo 'building pxpoly' - $(CXX) -o "pxpoly" $(OPT_FLAGS) $(POLY_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxpoly" $(OPT_FLAGS) $(POLY_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxcolt: $(CPP_OBJS) $(TREE_OBJS) $(COLLAPSE_TREE_OBJ) @echo 'building pxcolt' - $(CXX) -o "pxcolt" $(OPT_FLAGS) $(COLLAPSE_TREE_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxcolt" $(OPT_FLAGS) $(COLLAPSE_TREE_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxbp: $(CPP_OBJS) $(TREE_OBJS) $(BP_OBJ) @echo 'building pxbp' - $(CXX) -o "pxbp" $(OPT_FLAGS) $(BP_OBJ) $(CPP_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxbp" $(OPT_FLAGS) $(BP_OBJ) $(CPP_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 @@ -587,22 +587,22 @@ pxbp: $(CPP_OBJS) $(TREE_OBJS) $(BP_OBJ) pxrls: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RELABEL_SEQ_OBJ) @echo 'building pxrls' - $(CXX) -o "pxrls" $(OPT_FLAGS) $(RELABEL_SEQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxrls" $(OPT_FLAGS) $(RELABEL_SEQ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxrlt: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RELABEL_TREE_OBJ) @echo 'building pxrlt' - $(CXX) -o "pxrlt" $(OPT_FLAGS) $(RELABEL_TREE_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxrlt" $(OPT_FLAGS) $(RELABEL_TREE_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxupgma: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(UPGMA_OBJ) @echo 'building pxupgma' - $(CXX) -o "pxupgma" $(OPT_FLAGS) $(UPGMA_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxupgma" $(OPT_FLAGS) $(UPGMA_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 pxnj: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(NJ_OBJ) @echo 'building pxnj' - $(CXX) -o "pxnj" $(OPT_FLAGS) $(NJ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) + $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxnj" $(OPT_FLAGS) $(NJ_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(LDFLAGS) cat man/$@.1.in > man/$@.1 @@ -610,17 +610,17 @@ pxnj: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(NJ_OBJ) pxseqgen: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RATE_OBJS) $(SEQGEN_OBJ) $(FORT_OBJS) @echo 'building pxseqgen' - $(CXX) -o "pxseqgen" $(OPT_FLAGS) $(SEQGEN_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RATE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) + $(CXX) $(CXXFLAGS) -o "pxseqgen" $(OPT_FLAGS) $(SEQGEN_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RATE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) cat man/$@.1.in > man/$@.1 pxcontrates: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(CONTRATES_OBJ) $(RATE_OBJS) @echo 'building pxcontrates' - $(CXX) -o "pxcontrates" $(OPT_FLAGS) $(CONTRATES_OBJ) $(RATE_OBJS) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) + $(CXX) $(CXXFLAGS) -o "pxcontrates" $(OPT_FLAGS) $(CONTRATES_OBJ) $(RATE_OBJS) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) cat man/$@.1.in > man/$@.1 pxstrec: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RATE_OBJS) $(STREC_OBJ) #$(FORT_OBJS) @echo 'building pxstrec' - $(CXX) -o "pxstrec" $(OPT_FLAGS) $(STREC_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RATE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) #$(FORT_OBJS) -lgfortran + $(CXX) $(CXXFLAGS) -o "pxstrec" $(OPT_FLAGS) $(STREC_OBJ) $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RATE_OBJS) $(CPPFLAGS) $(LDFLAGS) $(CPP_LIBS) #$(FORT_OBJS) -lgfortran cat man/$@.1.in > man/$@.1 @@ -628,11 +628,11 @@ pxstrec: $(CPP_OBJS) $(SEQ_OBJS) $(TREE_OBJS) $(RATE_OBJS) $(STREC_OBJ) #$(FORT_ #removing until fortran update #pxsm0: $(CPP_OBJS) $(RATE_OBJS) $(SM0_OBJ) $(FORT_OBJS) # @echo 'building pxsm0' -# $(CXX) -o "pxsm0" $(OPT_FLAGS) $(SM0_OBJ) $(CPP_OBJS) $(RATE_OBJS) $(FORT_OBJS) $(CPP_LIBS) -lgfortran +# $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxsm0" $(OPT_FLAGS) $(SM0_OBJ) $(CPP_OBJS) $(RATE_OBJS) $(FORT_OBJS) $(CPP_LIBS) -lgfortran #pxsm2a: $(CPP_OBJS) $(RATE_OBJS) $(SM2A_OBJ) $(FORT_OBJS) # @echo 'building pxsm2a' -# $(CXX) -o "pxsm2a" $(OPT_FLAGS) $(SM2A_OBJ) $(CPP_OBJS) $(RATE_OBJS) $(FORT_OBJS) $(CPP_LIBS) -lgfortran +# $(CXX) $(CXXFLAGS) $(CPPFLAGS) -o "pxsm2a" $(OPT_FLAGS) $(SM2A_OBJ) $(CPP_OBJS) $(RATE_OBJS) $(FORT_OBJS) $(CPP_LIBS) -lgfortran -- cgit v1.2.3 From f767c87dc259def2989263a5bdffd883ffbcbb4b Mon Sep 17 00:00:00 2001 From: Nilesh Patra Date: Tue, 15 Nov 2022 07:43:33 +0100 Subject: Also build and vendor pxupgma pxnj Last-Update: 2021-07-10 Gbp-Pq: Name build-more-programs.patch --- src/Makefile.in | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/Makefile.in b/src/Makefile.in index 0cc6088..f6a9666 100644 --- a/src/Makefile.in +++ b/src/Makefile.in @@ -357,7 +357,7 @@ main_%.o: ./main_%.cpp %.o: ./%.cpp ./%.h $(CXX) $(CXXFLAGS) $(OPT_FLAGS) $(CPPFLAGS) $(LDFLAGS) -c -fmessage-length=0 -MMD -MP -MF "$(@:%.o=%.d)" -o "$@" "$<" -PROGS := pxaa2cdn pxbdsim pxboot pxbp pxcat pxclsq pxcltr pxcolt pxcomp pxconsq pxfqfilt pxlog pxlssq pxlstr pxmono pxmrca pxmrcacut pxmrcaname pxnw pxpoly pxrecode pxrevcomp pxrls pxrlt pxrmk pxrms pxrmt pxrr pxs2fa pxs2nex pxs2phy pxseqgen pxssort pxsstat pxsw pxt2new pxt2nex pxtcol pxtcomb pxtgen pxtlate pxtrt pxtscale pxvcf2fa $(NLOPT_PROGRAMS) +PROGS := pxaa2cdn pxbdsim pxboot pxbp pxcat pxclsq pxcltr pxcolt pxcomp pxconsq pxfqfilt pxlog pxlssq pxlstr pxmono pxmrca pxmrcacut pxmrcaname pxnw pxpoly pxrecode pxrevcomp pxrls pxupgma pxrlt pxnj pxrmk pxrms pxrmt pxrr pxs2fa pxs2nex pxs2phy pxseqgen pxssort pxsstat pxsw pxt2new pxt2nex pxtcol pxtcomb pxtgen pxtlate pxtrt pxtscale pxvcf2fa $(NLOPT_PROGRAMS) # default all target all: $(PROGS) -- cgit v1.2.3 From 7f9fd4a85b8c6ab3d046ff0d77a88f5d2a3af36b Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=C3=89tienne=20Mollier?= Date: Tue, 15 Nov 2022 07:43:33 +0100 Subject: fix "nan" test failures on i386 caused by -ffast-math Bug: https://github.com/FePhyFoFum/phyx/issues/145#issuecomment-824866619 Last-Update: 2022-04-14 Last-Update: 2022-04-14 Gbp-Pq: Name i386.patch --- src/Makefile.in | 7 ++++++- 1 file changed, 6 insertions(+), 1 deletion(-) diff --git a/src/Makefile.in b/src/Makefile.in index f6a9666..620eb42 100644 --- a/src/Makefile.in +++ b/src/Makefile.in @@ -32,7 +32,12 @@ ifeq "$(HOMP)" "Y" endif ifneq "$(CXX)" "icc" - OPT_FLAGS += -ffast-math -ftree-vectorize + OPT_FLAGS += -ftree-vectorize + ifneq ($(filter @host_cpu@,i386 i486 i586 i686),) + OPT_FLAGS += -ffloat-store + else + OPT_FLAGS += -ffast-math + endif endif NLOPT_PROGRAMS := -- cgit v1.2.3