package de.lmu.ifi.dbs.elki.distance.distancefunction.timeseries; /* This file is part of ELKI: Environment for Developing KDD-Applications Supported by Index-Structures Copyright (C) 2015 Ludwig-Maximilians-Universität München Lehr- und Forschungseinheit für Datenbanksysteme ELKI Development Team This program is free software: you can redistribute it and/or modify it under the terms of the GNU Affero General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Affero General Public License for more details. You should have received a copy of the GNU Affero General Public License along with this program. If not, see . */ import de.lmu.ifi.dbs.elki.data.NumberVector; import de.lmu.ifi.dbs.elki.data.type.TypeUtil; import de.lmu.ifi.dbs.elki.data.type.VectorTypeInformation; import de.lmu.ifi.dbs.elki.distance.distancefunction.AbstractNumberVectorDistanceFunction; import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer; import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID; import de.lmu.ifi.dbs.elki.utilities.optionhandling.constraints.CommonConstraints; import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization; import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.DoubleParameter; /** * Edit Distance for FeatureVectors. * * @author Thomas Bernecker * @since 0.2 */ public abstract class AbstractEditDistanceFunction extends AbstractNumberVectorDistanceFunction { /** * Keeps the currently set bandSize. */ protected double bandSize; /** * Constructor. * * @param bandSize Band size */ public AbstractEditDistanceFunction(double bandSize) { super(); this.bandSize = bandSize; } /** * Compute the effective band size. * * @param dim1 First dimensionality * @param dim2 Second dimensionality * @return Effective bandsize */ protected int effectiveBandSize(final int dim1, final int dim2) { if(bandSize == Double.POSITIVE_INFINITY) { return (dim1 > dim2) ? dim1 : dim2; } if(bandSize >= 1.) { return (int) bandSize; } // Max * bandSize: return (int) Math.ceil((dim1 >= dim2 ? dim1 : dim2) * bandSize); } @Override public VectorTypeInformation getInputTypeRestriction() { return TypeUtil.NUMBER_VECTOR_VARIABLE_LENGTH; } @Override public boolean equals(Object obj) { if(obj == null) { return false; } if(!this.getClass().equals(obj.getClass())) { return false; } return this.bandSize == ((AbstractEditDistanceFunction) obj).bandSize; } /** * Parameterization class. * * @author Erich Schubert * * @apiviz.exclude */ public abstract static class Parameterizer extends AbstractParameterizer { /** * Bandsize parameter. */ public static final OptionID BANDSIZE_ID = new OptionID("edit.bandsize", // "The band size for time series alignment. By default, no constraint is used. "// + "If the value is larger than 0, it will be considered absolute, otherwise relative to the longer sequence. " // + "Note that 0 does not make sense: use Euclidean distance then instead."); /** * Keeps the currently set bandSize. */ protected double bandSize = Double.POSITIVE_INFINITY; @Override protected void makeOptions(Parameterization config) { super.makeOptions(config); final DoubleParameter bandSizeP = new DoubleParameter(BANDSIZE_ID) // .setOptional(true) // .addConstraint(CommonConstraints.GREATER_THAN_ZERO_DOUBLE); if(config.grab(bandSizeP)) { bandSize = bandSizeP.doubleValue(); } } } }