package de.lmu.ifi.dbs.elki.distance.similarityfunction.kernel; /* This file is part of ELKI: Environment for Developing KDD-Applications Supported by Index-Structures Copyright (C) 2015 Ludwig-Maximilians-Universität München Lehr- und Forschungseinheit für Datenbanksysteme ELKI Development Team This program is free software: you can redistribute it and/or modify it under the terms of the GNU Affero General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Affero General Public License for more details. You should have received a copy of the GNU Affero General Public License along with this program. If not, see . */ import de.lmu.ifi.dbs.elki.data.NumberVector; import de.lmu.ifi.dbs.elki.distance.distancefunction.AbstractNumberVectorDistanceFunction; import de.lmu.ifi.dbs.elki.distance.similarityfunction.AbstractVectorSimilarityFunction; import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer; import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID; import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization; import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.DoubleParameter; /** * Sigmoid kernel function (aka: hyperbolic tangent kernel, multilayer * perceptron MLP kernel). * * @author Erich Schubert */ public class SigmoidKernelFunction extends AbstractVectorSimilarityFunction { /** * Scaling factor c, bias theta */ private final double c, theta; /** * Constructor. * * @param c Scaling factor c. * @param theta Bias parameter theta. */ public SigmoidKernelFunction(double c, double theta) { super(); this.c = c; this.theta = theta; } @Override public double similarity(NumberVector o1, NumberVector o2) { final int dim = AbstractNumberVectorDistanceFunction.dimensionality(o1, o2); double sim = 0.; for (int i = 0; i < dim; i++) { final double v = o1.doubleValue(i) * o2.doubleValue(i); sim += v; } return Math.tanh(c * sim + theta); } /** * Parameterization class. * * @author Erich Schubert * * @apiviz.exclude */ public static class Parameterizer extends AbstractParameterizer { /** * C parameter: scaling */ public static final OptionID C_ID = new OptionID("kernel.sigmoid.c", "Sigmoid c parameter (scaling)."); /** * Theta parameter: bias */ public static final OptionID THETA_ID = new OptionID("kernel.sigmoid.theta", "Sigmoid theta parameter (bias)."); /** * C parameter, theta parameter */ protected double c = 1., theta = 0.; @Override protected void makeOptions(Parameterization config) { super.makeOptions(config); final DoubleParameter cP = new DoubleParameter(C_ID, 1.); if (config.grab(cP)) { c = cP.doubleValue(); } final DoubleParameter thetaP = new DoubleParameter(THETA_ID, 0.); if (config.grab(thetaP)) { theta = thetaP.doubleValue(); } } @Override protected SigmoidKernelFunction makeInstance() { return new SigmoidKernelFunction(c, theta); } } }