package de.lmu.ifi.dbs.elki.datasource; /* This file is part of ELKI: Environment for Developing KDD-Applications Supported by Index-Structures Copyright (C) 2012 Ludwig-Maximilians-Universität München Lehr- und Forschungseinheit für Datenbanksysteme ELKI Development Team This program is free software: you can redistribute it and/or modify it under the terms of the GNU Affero General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Affero General Public License for more details. You should have received a copy of the GNU Affero General Public License along with this program. If not, see . */ import java.util.List; import de.lmu.ifi.dbs.elki.datasource.bundle.BundleStreamSource; import de.lmu.ifi.dbs.elki.datasource.bundle.MultipleObjectsBundle; import de.lmu.ifi.dbs.elki.datasource.bundle.StreamFromBundle; import de.lmu.ifi.dbs.elki.datasource.filter.ObjectFilter; import de.lmu.ifi.dbs.elki.datasource.filter.StreamFilter; import de.lmu.ifi.dbs.elki.datasource.parser.Parser; import de.lmu.ifi.dbs.elki.logging.Logging; import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer; import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID; import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization; import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ObjectListParameter; import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.ObjectParameter; /** * Abstract super class for all database connections. AbstractDatabaseConnection * already provides the setting of the database according to parameters. * * @author Elke Achtert * * @apiviz.uses ObjectFilter */ public abstract class AbstractDatabaseConnection implements DatabaseConnection { /** * A sign to separate components of a label. */ public static final String LABEL_CONCATENATION = " "; /** * Filters to apply to the input data. *

* Key: {@code -dbc.filter} *

*/ public static final OptionID FILTERS_ID = new OptionID("dbc.filter", "The filters to apply to the input data."); /** * Parameter to specify the parser to provide a database. *

* Key: {@code -dbc.parser} *

*/ public static final OptionID PARSER_ID = new OptionID("dbc.parser", "Parser to provide the database."); /** * The filters to invoke */ protected List filters; /** * Constructor. * * @param filters Filters to apply, can be null */ protected AbstractDatabaseConnection(List filters) { this.filters = filters; } /** * Transforms the specified list of objects and their labels into a list of * objects and their associations. * * @param bundle the objects to process * @return processed objects */ protected MultipleObjectsBundle invokeFilters(MultipleObjectsBundle bundle) { BundleStreamSource prevs = null; MultipleObjectsBundle prevb = bundle; if(filters != null) { for(ObjectFilter filter : filters) { if(filter instanceof StreamFilter) { StreamFilter sfilter = (StreamFilter) filter; if(prevs != null) { sfilter.init(prevs); } else { sfilter.init(new StreamFromBundle(prevb)); } prevs = sfilter; prevb = null; } else { if(prevs != null) { prevb = filter.filter(MultipleObjectsBundle.fromStream(prevs)); prevs = null; } else { prevb = filter.filter(prevb); prevs = null; } } } } if(prevb != null) { return prevb; } else { return MultipleObjectsBundle.fromStream(prevs); } } /** * Transforms the specified list of objects and their labels into a list of * objects and their associations. * * @param bundle the objects to process * @return processed objects */ protected BundleStreamSource invokeFilters(BundleStreamSource bundle) { BundleStreamSource prevs = bundle; MultipleObjectsBundle prevb = null; if(filters != null) { for(ObjectFilter filter : filters) { if(filter instanceof StreamFilter) { StreamFilter sfilter = (StreamFilter) filter; if(prevs != null) { sfilter.init(prevs); } else { sfilter.init(new StreamFromBundle(prevb)); } prevs = sfilter; prevb = null; } else { if(prevs != null) { prevb = filter.filter(MultipleObjectsBundle.fromStream(prevs)); prevs = null; } else { prevb = filter.filter(prevb); prevs = null; } } } } if(prevs != null) { return prevs; } else { return new StreamFromBundle(prevb); } } /** * Get the logger for this database connection. * * @return Logger */ protected abstract Logging getLogger(); /** * Parameterization class. * * @author Erich Schubert * * @apiviz.exclude */ public abstract static class Parameterizer extends AbstractParameterizer { /** * Filters */ protected List filters; /** * Parser to use */ protected Parser parser = null; /** * Get the filters parameter * * @param config Parameterization */ protected void configFilters(Parameterization config) { final ObjectListParameter filterParam = new ObjectListParameter(FILTERS_ID, ObjectFilter.class, true); if(config.grab(filterParam)) { filters = filterParam.instantiateClasses(config); } } /** * Get the parser parameter * * @param config Parameterization * @param parserRestrictionClass Restriction class * @param parserDefaultValueClass Default value */ protected void configParser(Parameterization config, Class parserRestrictionClass, Class parserDefaultValueClass) { ObjectParameter parserParam = new ObjectParameter(PARSER_ID, parserRestrictionClass, parserDefaultValueClass); if(config.grab(parserParam)) { parser = parserParam.instantiateClass(config); } } } }