package de.lmu.ifi.dbs.elki.distance.distancefunction; /* This file is part of ELKI: Environment for Developing KDD-Applications Supported by Index-Structures Copyright (C) 2012 Ludwig-Maximilians-Universität München Lehr- und Forschungseinheit für Datenbanksysteme ELKI Development Team This program is free software: you can redistribute it and/or modify it under the terms of the GNU Affero General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Affero General Public License for more details. You should have received a copy of the GNU Affero General Public License along with this program. If not, see . */ import de.lmu.ifi.dbs.elki.data.NumberVector; import de.lmu.ifi.dbs.elki.data.type.VectorFieldTypeInformation; import de.lmu.ifi.dbs.elki.math.MathUtil; import de.lmu.ifi.dbs.elki.math.linearalgebra.Matrix; import de.lmu.ifi.dbs.elki.math.linearalgebra.Vector; /** * Provides the Weighted distance for feature vectors. * * @author Elke Achtert */ // TODO: Factory with parameterizable weight matrix? public class WeightedDistanceFunction extends AbstractVectorDoubleDistanceFunction { /** * The weight matrix. */ protected Matrix weightMatrix; /** * Provides the Weighted distance for feature vectors. * * @param weightMatrix weight matrix */ public WeightedDistanceFunction(Matrix weightMatrix) { super(); this.weightMatrix = weightMatrix; assert (weightMatrix.getColumnDimensionality() == weightMatrix.getRowDimensionality()); } /** * Provides the Weighted distance for feature vectors. * * @return the Weighted distance between the given two vectors */ @Override public double doubleDistance(NumberVector o1, NumberVector o2) { assert (o1.getDimensionality() == o2.getDimensionality()) : "Different dimensionality of FeatureVectors" + "\n first argument: " + o1.toString() + "\n second argument: " + o2.toString(); Vector o1_minus_o2 = o1.getColumnVector().minusEquals(o2.getColumnVector()); return MathUtil.mahalanobisDistance(weightMatrix, o1_minus_o2); } @Override public VectorFieldTypeInformation> getInputTypeRestriction() { return VectorFieldTypeInformation.get(NumberVector.class, weightMatrix.getColumnDimensionality()); } }