package de.lmu.ifi.dbs.elki.utilities.scaling.outlier; /* This file is part of ELKI: Environment for Developing KDD-Applications Supported by Index-Structures Copyright (C) 2012 Ludwig-Maximilians-Universität München Lehr- und Forschungseinheit für Datenbanksysteme ELKI Development Team This program is free software: you can redistribute it and/or modify it under the terms of the GNU Affero General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Affero General Public License for more details. You should have received a copy of the GNU Affero General Public License along with this program. If not, see . */ import de.lmu.ifi.dbs.elki.database.ids.DBID; import de.lmu.ifi.dbs.elki.database.ids.DBIDIter; import de.lmu.ifi.dbs.elki.math.DoubleMinMax; import de.lmu.ifi.dbs.elki.result.outlier.OutlierResult; import de.lmu.ifi.dbs.elki.utilities.optionhandling.AbstractParameterizer; import de.lmu.ifi.dbs.elki.utilities.optionhandling.OptionID; import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameterization.Parameterization; import de.lmu.ifi.dbs.elki.utilities.optionhandling.parameters.DoubleParameter; /** * Scaling that can map arbitrary positive values to a value in the range of * [0:1]. * * Transformation is done by taking the square root, then doing a linear linear * mapping onto 0:1 using the minimum values seen. * * @author Erich Schubert */ public class OutlierSqrtScaling implements OutlierScalingFunction { /** * Parameter to specify the fixed minimum to use. *

* Key: {@code -sqrtscale.min} *

*/ public static final OptionID MIN_ID = OptionID.getOrCreateOptionID("sqrtscale.min", "Fixed minimum to use in sqrt scaling."); /** * Parameter to specify the fixed maximum to use. *

* Key: {@code -sqrtscale.max} *

*/ public static final OptionID MAX_ID = OptionID.getOrCreateOptionID("sqrtscale.max", "Fixed maximum to use in sqrt scaling."); /** * Field storing the minimum value */ protected Double min = null; /** * Field storing the Maximum value */ protected Double max = null; /** * Scaling factor */ protected double factor; /** * Constructor. * * @param min * @param max */ public OutlierSqrtScaling(Double min, Double max) { super(); this.min = min; this.max = max; } @Override public double getScaled(double value) { assert (factor != 0) : "prepare() was not run prior to using the scaling function."; if(value <= min) { return 0; } return Math.min(1, (Math.sqrt(value - min) / factor)); } @Override public void prepare(OutlierResult or) { if(min == null || max == null) { DoubleMinMax mm = new DoubleMinMax(); for(DBIDIter iditer = or.getScores().iterDBIDs(); iditer.valid(); iditer.advance()) { DBID id = iditer.getDBID(); double val = or.getScores().get(id); if(!Double.isNaN(val) && !Double.isInfinite(val)) { mm.put(val); } } if(min == null) { min = mm.getMin(); } if(max == null) { max = mm.getMax(); } } factor = Math.sqrt(max - min); } @Override public double getMin() { return 0.0; } @Override public double getMax() { return 1.0; } /** * Parameterization class. * * @author Erich Schubert * * @apiviz.exclude */ public static class Parameterizer extends AbstractParameterizer { protected double min; protected double max; @Override protected void makeOptions(Parameterization config) { super.makeOptions(config); DoubleParameter minP = new DoubleParameter(MIN_ID, true); if(config.grab(minP)) { min = minP.getValue(); } DoubleParameter maxP = new DoubleParameter(MAX_ID, true); if(config.grab(maxP)) { max = maxP.getValue(); } } @Override protected OutlierSqrtScaling makeInstance() { return new OutlierSqrtScaling(min, max); } } }