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Diffstat (limited to 'debian/copyright')
-rw-r--r-- | debian/copyright | 64 |
1 files changed, 64 insertions, 0 deletions
diff --git a/debian/copyright b/debian/copyright new file mode 100644 index 00000000..4e3a3c8f --- /dev/null +++ b/debian/copyright @@ -0,0 +1,64 @@ +Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Upstream-Contact: toolbox@ncbi.nlm.nih.gov +Upstream-Name: ncbi +Source: http://ftp.ncbi.nih.gov/toolbox/ncbi_tools/old/ + +Files: * +Copyright: 1996-2017 NCBI +License: public_domain + +Files: debian/* +Copyright: 1998-1999 Stephane Bortzmeyer <bortzmeyer@pasteur.fr> + 2001 Dr. Guenter Bechly <gbechly@debian.org> + 2001-2018 Aaron M. Ucko <ucko@debian.org> +License: public_domain + +Files: debian/tests/test-data/* (except for trnascan-se_sample.output) +Copyright: 1996-2018 NCBI +License: public_domain +Comment: + nc0225.aso.gz and dsRNA_viruses.* can be dowloaded by running: + wget ftp://ftp.ncbi.nih.gov/ncbi-asn1/daily-nc/nc0225.aso.gz + wget ftp://ftp.ncbi.nlm.nih.gov/gene/DATA/ASN_BINARY/Viruses/dsRNA_viruses.ags.gz + wget ftp://ftp.ncbi.nlm.nih.gov/gene/DATA/GENE_INFO/Viruses/dsRNA_viruses.gene_info.gz + . + spidey_* can be downloaded using their accession numbers with help of idfetch, e.g.: + idfetch -dn -t 5 -c 1 -g 1327850419 -o spidey_mRNA.fasta + idfetch -dn -t 5 -c 1 -g 568802167 -o spidey_genome.fasta + . + Based on the example provided in /usr/share/doc/ncbi-tools-bin/tbl2asn.txt.gz, + Sc_16.sbt was generated using NCBI Submission Portal: + https://submit.ncbi.nlm.nih.gov/genbank/template/submission/ + . + The examples for Sc_16.fsa and Sc_16.tbl were taken from here: + https://www.ncbi.nlm.nih.gov/genbank/tbl2asn2/ + +Files: debian/tests/test-data/trnascan-se_sample.output +Copyright: 2018 Liubov Chuprikova <chuprikovalv@gmail.com> +License: public_domain +Comment: + The file was generated by tRNAscan-SE 2.0: + tRNAscan-SE -d -y -o trnascan-se_sample.output /usr/share/doc/trnascan-se/examples/Example1.fa + +License: public_domain + The NCBI toolkit has been put into the public domain, completely unfettered: + . + PUBLIC DOMAIN NOTICE + National Center for Biotechnology Information + . + This software/database is a "United States Government Work" under the + terms of the United States Copyright Act. It was written as part of + the author's official duties as a United States Government employee and + thus cannot be copyrighted. This software/database is freely available + to the public for use. The National Library of Medicine and the U.S. + Government have not placed any restriction on its use or reproduction. + . + Although all reasonable efforts have been taken to ensure the accuracy + and reliability of the software and data, the NLM and the U.S. + Government do not and cannot warrant the performance or results that + may be obtained by using this software or data. The NLM and the U.S. + Government disclaim all warranties, express or implied, including + warranties of performance, merchantability or fitness for any particular + purpose. + . + Please cite the author in any work or product based on this material. |