New upstream version 0.6.0+dfsg

1 files changed, 170 insertions, 0 deletions

diff --git a/silx/math/fit/functions_wrapper.pxd b/silx/math/fit/functions_wrapper.pxd
new file mode 100644
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+++ b/silx/math/fit/functions_wrapper.pxd
@@ -0,0 +1,170 @@
+# coding: utf-8
+#/*##########################################################################
+# Copyright (C) 2016 European Synchrotron Radiation Facility
+#
+# Permission is hereby granted, free of charge, to any person obtaining a copy
+# of this software and associated documentation files (the "Software"), to deal
+# in the Software without restriction, including without limitation the rights
+# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+# copies of the Software, and to permit persons to whom the Software is
+# furnished to do so, subject to the following conditions:
+#
+# The above copyright notice and this permission notice shall be included in
+# all copies or substantial portions of the Software.
+#
+# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+# THE SOFTWARE.
+#
+#############################################################################*/
+
+__authors__ = ["P. Knobel"]
+__license__ = "MIT"
+__date__ = "14/06/2016"
+
+cimport cython
+
+cdef extern from "functions.h":
+    int erfc_array(double* x,
+                   int len_x,
+                   double* y)
+
+    int erf_array(double* x,
+                  int len_x,
+                  double* y);
+
+    void snip1d(double *data,
+                int size,
+                int width)
+
+    void snip2d(double *data,
+                int nrows,
+                int ncolumns,
+                int width)
+
+    void snip3d(double *data,
+                int nx,
+                int ny,
+                int nz,
+                int width)
+
+    int strip(double* input,
+              long len_input,
+              double c,
+              long niter,
+              int deltai,
+              long* anchors,
+              long len_anchors,
+              double* output)
+
+    int  sum_gauss(double* x,
+                   int len_x,
+                   double* pgauss,
+                   int len_pgauss,
+                   double* y)
+
+    int  sum_agauss(double* x,
+                    int len_x,
+                    double* pgauss,
+                    int len_pgauss,
+                    double* y)
+
+    int  sum_fastagauss(double* x,
+                        int len_x,
+                        double* pgauss,
+                        int len_pgauss,
+                        double* y)
+
+    int  sum_splitgauss(double* x,
+                        int len_x,
+                        double* pgauss,
+                        int len_pgauss,
+                        double* y)
+
+    int  sum_apvoigt(double* x,
+                     int len_x,
+                     double* pvoigt,
+                     int len_pvoigt,
+                     double* y)
+
+    int  sum_pvoigt(double* x,
+                    int len_x,
+                    double* pvoigt,
+                    int len_pvoigt,
+                    double* y)
+
+    int  sum_splitpvoigt(double* x,
+                         int len_x,
+                         double* pvoigt,
+                         int len_pvoigt,
+                         double* y)
+
+    int  sum_lorentz(double* x,
+                     int len_x,
+                     double* plorentz,
+                     int len_plorentz,
+                     double* y)
+
+    int  sum_alorentz(double* x,
+                     int len_x,
+                     double* plorentz,
+                     int len_plorentz,
+                     double* y)
+
+    int  sum_splitlorentz(double* x,
+                         int len_x,
+                         double* plorentz,
+                         int len_plorentz,
+                         double* y)
+
+    int sum_stepdown(double* x,
+                     int len_x,
+                     double* pdstep,
+                     int len_pdstep,
+                     double* y)
+
+    int sum_stepup(double* x,
+                   int len_x,
+                   double* pustep,
+                   int len_pustep,
+                   double* y)
+
+    int sum_slit(double* x,
+                 int len_x,
+                 double* pslit,
+                 int len_pslit,
+                 double* y)
+
+    int sum_ahypermet(double* x,
+                      int len_x,
+                      double* phypermet,
+                      int len_phypermet,
+                      double* y,
+                      int tail_flags)
+
+    int sum_fastahypermet(double* x,
+                          int len_x,
+                          double* phypermet,
+                          int len_phypermet,
+                          double* y,
+                          int tail_flags)
+
+    long seek(long begin_index,
+              long end_index,
+              long nsamples,
+              double  fwhm,
+              double sensitivity,
+              double debug_info,
+              long max_npeaks,
+              double * data,
+              double * peaks,
+              double * relevances)
+
+    int SavitskyGolay(double* input,
+                      long len_input,
+                      int npoints,
+                      double* output)