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diff --git a/CHANGELOG.rst b/CHANGELOG.rst index 073e1ac..e931657 100644 --- a/CHANGELOG.rst +++ b/CHANGELOG.rst @@ -1,5 +1,1095 @@ -Change Log -========== +Release Notes +============= + +2.0.1: 2024/03/18 +----------------- + +This is a bug fix version: + +* `silx.io.open`: Reverted behavior: `open` locks HDF5 files (PR #4074, #4084) +* Dependencies: Updated to advertise that `numpy` v2 is not supported (PR #4084) + + +2.0.0: 2024/01/30 +----------------- + +This version of `silx` supports Python 3.7 to 3.12. +This is the last version of `silx` supporting Python 3.7. +The `silx.gui` package supports `PySide6`, `PyQt6` and `PyQt5` (`PySide2` is no longer supported). + +**Breaking API change**: `silx.gui.plot.PlotWidget`'s add methods (i.e., `addCurve`, `addImage`, ...) returns the plot item object instance instead of its legend (https://github.com/silx-kit/silx/pull/3996). + +silx applications +................. + +* Added `silx compare`, a dedicated application to compare images (PR #3788, #3827, #3884, #3943, #3944) +* `silx view`: + + * Added `--slices` option (PR #3860) + * Added supports for data URL containing "**" to match multiple sub groups (PR #3795) + * Added keyboard shortcuts for open/close all (PR #3863) + * Improved: Stopped displaying a message box for each error (PR #3955) + * Improved: Use matplotlib if OpenGL is not available (PR #3905) + * Fixed support of NXData image with 0-length axis (PR #3768) + * Fixed setting focus at startup when opening a dataset (PR #3953) + +* `silx.app.utils`: Refactored (PR #3811) + +silx.io +....... + +* `silx.io.dictdump`: + + * Removed `dicttoh5`'s `overwrite_data` argument (PR #3806) + * Improved error message for `dicttoh5` with non-serializable data (PR #3937) + * Fixed `h5todict` errors argument issue (PR #3749) and fixed-length string issue (PR #3748) + +* `silx.io.h5py_utils`: + + * Fixed `retry` (PR #3775) + * Fixed: Do not call multiprocessing module in frozen binaries (PR #3984) + +* `silx.io.nxdata.parser`: Fixed `NXdata` validation (PR #3782) + +* `silx.io.url`: + + * Added support of URLs with slices to `DataUrl` (PR #3821) + * Added typings for `DataUrl` (PR #3968) + * Fixed `DataUrl`: Allow `file_path` to be `None` (PR #4051) + +* `silx.io.utils`: + + * Added support of bare file to `get_data` with `check_schemas=True` argument (PR #3859) + * Improved: `open` do not lock the file (PR #3939) + * Fixed small/big endian support in test (PR #3873) + * Fixed `h5py_read_dataset` support of empty arrays (PR #4052) + +silx.math +......... + +* Fixed several function docstrings (PR #3774) +* `silx.math.colormap`: Added `normalize` function to normalize to `uint8` (PR #3785) +* `silx.math.fit`: Added split pseudo-voigt with split lorentzian fraction (PR #3902) + +silx.opencl +........... + +* Fixed regression with PoCL and order of floating point operations (PR #3935) +* Fixed: skip test on broken platform (PR #3809) +* Fixed: prevent crash at init when loading silx with PortableCL + Cuda devices (PR #3924) +* `silx.opencl.atomic`: Added new checking for atomic32 and atomic64 operation (PR #3855) +* `silx.opencl.backprojection`: Removed deprecated `fourier_filter` function (PR #3816) +* `silx.opencl.codec`: + + * Added `bitshuffle_lz4`` decompression (PR #3714) + * Added support of pyopencl's `Buffer` and `Array` to `BitshuffleLz4.decompress` (PR #3787) + +* `silx.opencl.common``: + + * Removed `OpenCL.create_context` `useFp64` argument (PR #3801) + * Reworked initialisation of the module (PR #3903) + * Updated: Defer to pyopencl the interpretation of `PYOPENCL_CTX` (PR #3933) + +* `silx.opencl.convolution`: Removed Python 2 compatible code (PR #3818) + +silx.third_party +................ + +* Removed copy of scipy's Delaunay from third_party (PR #3808) +* Deprecated `EdfFile` and `TiffIO` (PR #3841) + +silx.gui +........ + +* `silx.gui`: + + * Added support for `QT_API` environment variable (PR #3981) + * Added a warning about pyOpenGL and Qt compatibility (PR #3738) + * Added some Python typing (PR #3957) + * Removed support of PySide6<6.4 (PR #3872) + * Improved `qWidgetFactory` test fixture (PR #4009) + * Fixed support of PySide 6.4 enums (PR #3737) + * Fixed support of PyQt6 (PR #3960, #3966, #3989, #3999, #4003) + * Fixed support of OpenGL with python3.12 and pyopengl <=3.1.7 (PR #3982) + * Fixed OpenGL version parsing (PR #3733) + +* `silx.gui.colors`: + + * Added indexed color names support to `rgba` (PR #3836, #3861) + * Added typing (PR #3974) + * `silx.gui.colors.rgba`: Changed from `AssertionError` to `ValueError` (PR #3864) + * Improved: `Colormap.setVRange` raises an exception if the range is not finite (PR #3794) + +* `silx.gui.constants`: Added: expose URI used to drag and drop `DataUrl` (PR #3796) + +* `silx.gui.data`: + + * Fixed issue with hdf5 attributes string formatting (PR #3790) + * `silx.gui.data.DataView`: Removed patch for pymca <v5.3.0 support (PR #3800) + * `silx.gui.data.HDF5TableView`: Fixed virtual and external dataset information (PR #3717) + * `silx.gui.data.RecordTableView`: Fixed issue with datasets with many rows failing to load due to incorrect variable type (PR #3926) + +* `silx.gui.dialog`: + + * `silx.gui.dialog.ColormapDialog`: + + * Added `DisplayMode` to API by renaming `_DataInPlotMode` (PR #3964) + * Fixed layout (PR #3792) + * Fixed state when updating `Item` (PR #3833) + * Fixed robustness of tools with item inheriting from `ImageBase` (PR #3858) + +* `silx.gui.hdf5`: + + * Added `NXnote` to the list of describable classes (PR #3832) + * Added tests for `H5Node` soft link to an external link issue (PR #3220) + +* `silx.gui.qt`: + + * Updated PySide6 `loadUi` function (PR #3783) + * Fixed Python>3.9 support (PR #3779) + +* `silx.gui.plot`: + + * `silx.gui.plot.actions`: Added typings for `PlotAction` (PR #3941) + * `silx.gui.plot.items`: + + * Added `Marker` item font configuration (PR #3956) + * Added background color for markers and removed automatic background color (PR #4012) + * Added `get|setLineGapColor` methods to `Curve` and `Histogram` (PR #3973) + * Renamed `Shape.get|setLineBgColor` to `get|setLineGapColor` (PR #4001) + * Deprecated `Curve` and `Image` sequence-like access (PR #3803) + * Improved handling of data ndim and shape for image items (PR #3976) + * Fixed: Removed `ImageDataAggregated` all-NaN warning (PR #3786) + * Fixed `Shape` display with dashes and a background color (PR #3906) + * `silx.gui.plot.items.roi`: + + * Added `RegionOfInterest`'s `getText` and `setText` methods (PR #3847) + * Added `populateContextMenu` method to ROIs (PR #3891) + * Added `ArcROI.getPositionRole` method (PR #3894) + * Added ROIs base classes to documentation (PR #3839) + * Removed deprecated methods `RegionOfInterest.get|setLabel` (PR #3810) + * Improved `ArcROI``: Hide the handler instead of hidding the symbol (PR #3887) + * Improved: highlighted RegionOfInterest takes priority for interactions (PR #3975) + * Fixed ROI initialisation with parent (PR #4053) + + * `silx.gui.plot.ColorBar`: Fixed division by zero issue (PR #4013) + * `silx.gui.plot.CompareImages`: + + * Added profile to compare image (PR #3845) + * Improved consistency of autoscale (PR #3823) + * Fixed the A-B visualization mode (PR #3856) + + * `silx.gui.plot.ImageStack`: + + * Added URL removal feature if the list is editable (PR #3913) + * Fixed `ImageStack` handling of visible state (PR #3834) + * Fixed issue (PR #4050) + + * `silx.gui.plot.ImageView`: Fixed histogram visibility (PR #3742) + * `silx.gui.plot.PlotWidget`: + + * Breaking changes: + + * Changed `add*` methods return value to return the item instead of its legend (PR #3996) + * Refactored management of items (PR #3986, #3988) + + * Added `margins` argument to `PlotWidget.setLimits` (PR #3828) + * Added `Plotwidget.get|setDefaultColors` and updated default colors behavior (PR #3835) + * Added `PlotWidget.sigBackendChanged` (PR #3890) + * Added per-axis zoom (PR #3842, #3843) + * Added support for 'other' kind of plot items (PR #3908) + * Added support of matplotlib tight layout as an experimental feature (PR #3865) + * Added support of line style defined as `(offset, (dash pattern))` (PR #4020) + * Added support for indexed color names support (PR #3836) + * Added sample script to check and compare backend features (PR #4031) + * Changed curve default colors to matchthe one from matplotlib >=2.0 (PR #3853) + * Changed curve highlighting to use by default a linewidth of 2 (PR #3854) + * Changed plot axes tick labels behavior to use offsets (PR #4007) + * Changed: use the default font from mpl (PR #4025) + * Changed font management (PR #4047) + * Improved rendering for OpenGL backend (PR #4002, #4015, #4023, #4034, #4038) + * Fixed documentation (PR #3773) + * Fixed mouse cursor update (PR #3904) + * Fixed: do not reset zoom when changing axes scales (PR #3862, #3869) + * Fixed: use `PlotWidget.get|setActiveScatter` instead of private method (PR #3987) + * Fixed tick display of time series (PR #4000) + * Fixed matplotlib marker without background (PR #4028) + + * `silx.gui.plot.PlotWindow`: Fixed display of zoom in/out actions (PR #3837) + * `silx.gui.plot.RulerToolButton`: Added interactive plot measurement tool (PR #3959, #4005) + * `silx.gui.plot.StackView`: Removed `setColormap` `autoscale` argument (PR #3805) + + * `silx.gui.plot.tools`: + + * `silx.gui.plot.tools.PositionInfo`: Fixed support of dark theme (PR #3965) + * `silx.gui.plot.tools.profile`: Fixed concurrency issue with RGB profiles (PR #3846) + * `silx.gui.plot.tools.roi.RegionOfInterestManager`: + + * Changed interaction mode for ROI creation (PR #3978) + * Fixed display glitch (PR #3954) + +* `silx.gui.plot3d`: + + * Updated font management (PR #4047) + * Fixed deprecation warning (PR #4046) + * `silx.gui.plot3d.ParamTreeView`: + + * Added typing and code cleanup (PR #3972) + * Fixed Qt6 support (PR #3971) + +* `silx.gui.utils.image`: Added support of `QImage.Format_Grayscale8` to `convertQImageToArray` (PR #3958) + +* `silx.gui.widgets`: + + * `silx.gui.widgets.FloatEdit`: + + * Added `widgetResizable` feature (PR #4006) + * Added typing and code cleanup (PR #3972) + + * `silx.gui.widgets.StackedProgressBar`: Added widget displaying more complex information progress information (PR #4008) + * `silx.gui.plot.widgets.UrlList`: Added `UrlList` widget (PR #3913) + * `silx.gui.widget.UrlSelectionTable`: + + * Improved look&feel and enabled drag&drop from `silx view` (PR #3797) + * Updated: Split the URL column in 3 columns (PR #3822) + * Fixed exception with interaction, renamed `get|setSelection` to `get|setUrlSelection` (PR #3791) + + * `silx.gui.widgets.WaiterOverlay`: Added a widget to display processing wheel on top of another widget (PR #3876) + +* `silx.utils`: + + * `silx.utils.launcher`: Improved error message (PR #3793) + * `silx.utils.retry`: Fixed: Lazy-loading of multiprocessing module (PR #3979) + +Miscellaneous +............. + +* Dependencies: + + * Removed support of Python 3.6 (PR #3712), `PySide2` (PR #3784) and `fabio`<0.9 (PR #3829) + * Replaced `setuptools`'s `pkg_resources` with `packaging` as runtime dependency (PR #3910) + * Fixed support of `pint` >= 0.20 (PR #3725), `cython` (PR #3770, #4033) and `PyInstaller` v6 (PR #4041) + * Fixed deprecation warnings from `numpy`, `scipy`, `matplotlib` and `h5py` (PR #3741, #3777, #4045, #3980) + +* Clean-up: + + * Removed features deprecated since <1.0.0 (PR #3798, #3799, #3802, #3804) + * Removed remaining Python2 support (PR #3815, #3840, #3952) + * Removed unused imports (PR #3814) + * Replaced `OrderedDict` by `dict` (PR #3830) + * Updated: Using `black` to format the code (PR #3991) + * Fixed typo: 4 `"` quotes instead of 3. (PR #3838) + +* Build: + + * Removed `setup.py` commands and options (PR #3831) + * Removed constraint on `setuptools` version (PR #3909) + * Updated build dependencies (PR #4035) + * Fixed Windows fat binary filename and links (PR #4048) + * Bump to 2.0.dev (PR #4014) + +* Debian packaging: + + * Removed Debian 10 and 11 packaging (PR #4017) + * Added Debian 12 packaging (PR #3812) + * Added `pytest-mock` to Debian build dependencies (PR #3740) + * Updated `build-deb.sh` (PR #4022, #3772) and `rules` (PR #3732) + +* Updated documentation (PR #3765, #3899, #3970, #3994, #4037, #4036, #4039, #4042, #4055) +* Updated continuous integration (PR #3727, #3967, #3983) +* Fixed tests (PR #3722, #3723, #4043, #4044) + +1.1.2: 2022/12/16 +----------------- + +This is a bug fix version: + +* `silx.gui`: + + * Fixed support of `PySide` 6.4 enums (PR #3737, #3738) + * Fixed OpenGL version parsing (PR #3733, #3738) + + * `silx.gui.plot`: + + * Fixed issue when `PlotWidget` has a size of 0 (PR #3736, #3738) + * Fixed reset of interaction when closing mask tool (PR #3735, #3738) + +* Miscellaneous: Updated Debian packaging (PR #3732, #3738) + +1.1.1: 2022/11/30 +----------------- + +This is a bug fix version: + +* Fixed support of `pint` >= 0.20 (PR #3725, #3728) +* Fixed continuous integration (PR #3727, #3728) +* Updated changelog (PR #3729) + +1.1.0: 2022/10/27 +----------------- + +This is the last version of `silx` supporting Python 3.6 and `PySide2`. +Next version will require Python >= 3.7 + +This is the first version of `silx` supporting `PyQt6` (for `Qt6`). +Please note that `PyQt6` >= v6.3.0 is required. + +* `silx view`: + + * Improved wildcard support in filename and data path (PR #3663) + * Enabled plot grid by default for curve plots (PR #3667) + * Fixed refresh for content opened as `file.h5::/path` (PR #3665) + +* `silx.gui`: + + * Added support of `PyQt6` >= 6.3.0 (PR #3655) + * Fixed `matplotlib`>=3.6.0 and `PySide6` support (PR #3639) + * Fixed `PySide6` >=6.2.2 support (PR #3581) + * Fixed Python 3.10 with `PyQt5` support (PR #3591) + * Fixed crashes on exit when deriving `QApplication` (PR #3588) + * Deprecated `PySide2` support (PR #3648) + * Fixed: raise exception early when using a version of `PyQt5` incompatible with Python 3.10 (PR #3694) + + * `silx.gui.data`: + + * Updated: Do not keep aspect ratio in `NXdata` image views when axes `@units` are different (PR #3660) + * `silx.gui.data.ArrayTableWidget`: Updated to edit without clearing previous data (PR #3686) + * `silx.gui.data.DataViewer`: Added `selectionChanged` signal (PR #3646) + * `silx.gui.data.Hdf5TableView`: Fixed for virtual datasets in the same file (PR #3572) + + * `silx.gui.dialog.ColormapDialog`: Updated layout and presentation of the features (PR #3671, #3609) + + * `silx.gui.hdf5`: Fixed issue with unsupported hdf5 entity (e.g. datatype) (PR #3643) + + * `silx.gui.plot`: + + * `silx.gui.plot.items`: + + * Added `BandROI` item (PR #3680, #3702, #3707) + * Updated to take errorbars into account for item bounds (PR #3647) + * Fixed `ArcROI` display (PR #3617) + * Fixed error logs for scatter triangle visualisation with aligned points (PR #3644) + + * `silx.gui.plot.MaskToolsWidget`: Changed mask load/save default directory (PR #3704) + + * `silx.gui.plot.PlotWidget`: + + * Fixed time axis with values outside of supported range ]0, 10000[ years (PR 3597) + * Fixed matplotlib backend replot failure under specific conditions (PR #3590) + + * `silx.gui.PlotWidget`'s OpenGL backend: + + * Added support of LaTex-like math syntax to text display (PR #3600) + * Updated text label background to be less transparent (PR #3593) + * Fixed dashed curve rendering (PR #3596) + * Fixed image rendering of arcsinh colormap for uint8 and uint16 data (PR #3604) + * Fixed rendering on some GPU (PR #3695) + * Fixed empty text support (PR #3701) + * Fixed: Avoid rendering when OpenGL version/extension check fails (PR #3707) + + * `silx.gui.plot.PlotWindow`: Fixed management of DockWidgets when showing/hiding the `PlotWindow` (PR #3631) + * `silx.gui.plot.PositionInfo`: Improved picking (PR #3640) + * `silx.gui.plot.StackView`: Updated toolbar implementation (PR #3697) + + * `silx.gui.plot.stats`: Fixed warnings when all data is outside the selected stats region (PR #3659) + * `silx.gui.plot.tools`: + + * Added snapping to profile curve (PR #3640) + * Fixed handling of `disconnect` exception (PR #3692) + * Fixed label formatting for 2D profile tool (PR #3698) + * Fixed computation of the slice profile (PR #3708) + + * `silx.gui.utils.glutils.isOpenGLAvailable`: Added possibility to check `AA_ShareOpenGLContexts` (PR #3688) + * `silx.gui.widgets.ElidedLabel`: Fixed API inherited from `QLabel` (PR #3650, #3707) + +* `silx.io`: + + * `silx.io.dictdump`: + + * Added "info" logs when an entity is not copied to the output HDF5 file `dicttoh5` (PR #3664) + * Added support of `pint` in `dicttoh5` and `dicttonx` (PR #3683) + + * `silx.io.nxdata`: + + * Updated `get_default` to be more permissive and follow `@default` recursively (PR #3662) + * Updated error dataset retrieval (PR #3657, #3672) + + * `silx.io.specfile`: + + * Fixed buffer overflow for too long motor or label (PR #3622) + * Fixed missing data if there is a trailing space in the mca array (PR #3612) + + * `silx.io.utils.retry`: Added retry for generator functions (PR #3679) + +* `silx.math`: + + * `silx.math.histogram`: + + * Added support of `uint16` weights for LUT histogram (PR #3670) + * Fixed `Histogramnd` computation on arrays with more than 2**31-1 samples (PR #3599) + + * `silx.math.fft`: + + * Added `export_wisdom()` and `import_wisdom()` (PR #3623) + * Fixed normalization modes, notably account for regression in `pyfftw` normalization (PR #3625) + * Fixed avoid creating OpenCL/Cuda contexts when not needed (PR #3587) + + * `silx.math.fit`: Updated documentation (PR #3582) + +* `silx.opencl`: Updated OpenCL profiling, fixed memory leak (PR #3690) + +* `silx.utils.ExternalResources`: Stored downloaded data checksum (PR #3580) + +* Miscellaneous: + + * Added `SILX_INSTALL_REQUIRES_STRIP` build configuration environment variable (PR #3602) + * Added optional use of `sphinx_autodoc_typehints` to generate the documentation (PR #3668) + * Updated build and development tools to remove dependency to `distutils` and `numpy.distutils` (PR #3583, #3585, #3613, #3649, #3651, #3653, #3658, #3661, #3678) + * Updated Windows installer (PR #3642) + * Updated documentation (PR #3699, #3709) + * Updated after 1.0.0 release (PR #3560, #3569) + * Fixed tests and continuous integration (PR #3632, #3637, #3639, #3685) + * Fixed Debian/Ubuntu packaging (PR #3693) + * Cleaned-up Python 2 compatibility code (PR #3673) + +1.0.0: 2021/12/06 +----------------- + +This is the first version of `silx` supporting `PySide6` (for `Qt6`) and using `pytest` to run the tests. + +* `silx view`: + + * Added Windows installer generation (PR #3548) + * Updated 'About' dialog (#3547, #3475) + * Fixed: Keep curve legend selection with changing dimensions (PR #3529) + * Fixed: Increase max number of opened file at start-up (PR #3545) + +* `silx.gui`: + + * Added PySide6 support (PR #3486, #3528, #3479, #3542, #3549, #3478, #3481): + * Removed support of PyQt4 / Pyside (PR #3423, #3424, #3480, #3482) + * `silx.gui.colors`: + + * Fixed duplicated logs when colormap vmin/vmax are not valid (PR #3471) + + * `silx.gui.plot`: + + * `silx.gui.plot.actions`: + + * `silx.gui.plot.actions.fit`: + + * Updated behaviour of fitted item auto update (PR #3532) + + * `silx.gui.plot.actions.histogram`: + + * Enhanced: Allow user to change histogram nbins and range (PR #3514, #3514) + * Updated `PixelIntensitiesHistoAction` to use `PlotWidget.selection` (PR #3408) + * Fixed issue when the whole image is masked (PR #3544) + * Fixed error on macOS 11 with 3D display in `silx view` (PR #3544) + + * `silx.gui.plot.CompareImages`: + + * Fixed `colormap`: avoid forcing vmin and vmax when not in 'HORIZONTAL_LINE' or 'VERTICAL_LINE' mode (PR #3510) + + * `silx.gui.plot.items`: + + * Added 'image_aggregated.ImageDataAggregated': item allowing to aggregate image data before display (PR #3503) + * Fixed `ArcROI.setGeometry` (fix #3492) + + * `silx.gui.plot.ImageStack`: + + * Enhanced management of the `animation thread` (PR #3440, PR #3441) + + * `silx.gui.plot.ImageView`: + + * Added action to show/hide the side histogram (PR #3488) + * Added 'resetzoom' parameter to 'ImageView.setImage' (PR #3488) + * Added empty array support to 'ImageView.setImage' (PR #3530) + * Added aggregation mode action (PR #3536) + * Added support of RGB and RGBA images (PR #3487) + * Updated 'imageview' example with a '--live' option (PR #3488) + * Fixed profile window, added `setProfileWindowBehavior` method (PR #3457) + * Fixed issue with profile window size (PR #3455) + + * `silx.gui.plot.PlotWidget`: + + * Fixed update of `Scatter` item binned statistics visualization (PR #3452) + * Fixed OpenGL backend memory leak (PR #3453) + * Enhanced: Optimized scatter when rendered as regular grid with the OpenGL backend (PR #3447) + * Enhanced axis limits management by the OpenGL backend (PR #3504) + * Enhanced control of repaint (PR #3449) + * Enhanced text label background rendering with OpenGL backend (PR #3565) + + * `silx.gui.plot.PlotWindow`: + + * Fixed returned action from 'getKeepDataAspectRatioAction' (PR #3500) + + * `silx.gui.plot3d`: + + * Fixed picking on highdpi screen (PR #3550) + * Fixed issue in parameter tree (PR #3550) + +* `silx.io`: + + * Added read support for FIO files (PR #3539) thanks to tifuchs contribution + * `silx.io.dictdump`: + + * Fixed missing conversion of the key (PR #3505) thanks to rnwatanabe contribution + * Extract update modes list to a constant global variable (PR #3460) thanks to jpcbertoldo + + * `silx.io.convert`: + + * Enhanced `write_to_h5`: `infile` parameter can now also be a HDF5 file as input (PR #3511) + + * `silx.io.h5py_utils`: + + * Added support of `locking` argument from the h5py.File when possible (PR #3554) + * Added log a critical message for unsupported versions of libhdf5 (PR #3533) + + * `silx.io.spech5`: + + * Enhanced: Improve robustness (PR #3507, #3463) + + * `silx.io.url`: + + * Fixed `is_absolute` in the case the `file_path()` returns None (PR #3437) + + * `silx.io.utils`: + + * Added 'silx.io.utils.visitall': provides a visitor of all items including links that works for both `commonh5` and `h5py` (PR #3511) + +* `silx.math`: + + * `silx.math.colormap`: + + * Added `apply_colormap` function (PR #3525) + * Enhanced `cmap` error messages (PR #3522) + +* `silx.opencl`: + + * Added description of compute capabilities for Ampere generation GPU from Nvidia (PR #3535) + * Added doubleword OpenCL library (PR #3466, PR #3472) + +* Miscellaneous: + + * Enhanced: Setup the project to use `pytest` (PR #3431, #3516, #3526) + * Enhanced: Minor test clean up (PR #3515, #3508) + * Updated project structure: move `silx` sources in `src/silx` (PR #3412) + * Fixed 'run_test.py --qt-binding' option (PR #3527) + * Fixed support of numpy 1.21rc1 (PR ##3476) + * Removed `six` dependency (PR #3483) + + +0.15.2: 2021/06/21 +------------------ + +Minor release: + +* `silx.io`: + + * `silx.io.spech5`: Enhanced robustness for missing positioner values (PR #3477) + * `silx.io.url`: Fixed `DataUrl.is_absolute` (PR #3467) + +* `silx.gui`: + + * Fixed naming of some loggers (PR #3477) + * Fixed assert on `ImageStack` when length of urls > 0 (PR #3491) + * `silx.gui.plot`: Fixed `ArcROI.setGeometry` (PR #3493) + +* `silx.opencl`: Expose the double-word library and include it in tests (PR #3466) +* Misc: Fixed support of `numpy` 1.21rc1 (PR #3477) + +0.15.1: 2021/05/17 +------------------ + +Minor release: + +* silx.gui.plot.PlotWidget: Fixed `PlotWidget` OpenGL backend memory leak (PR #3448) +* silx.gui.plot.ImageView: + + * Fixed profile window default behavior (PR #3458) + * Added `setProfileWindowBehavior` method (PR #3458) + +0.15.0: 2021/03/18 +------------------ + +Main new features are the `silx.io.h5py_utils` module which provides `h5py` concurrency helpers and image mask support by `silx.gui.plot.PlotWidget`'s tools. + +* `silx view`: + + * Fixed zoom reseting when scrolling a NXdata 3D stack (PR #3351) + * Fixed support of very large 1D datasets in "Raw" table view (PR #3418) + +* `silx.io`: + + * Added `h5py_utils` helper module for concurrent HDF5 reading and writing without SWMR (PR #3368, #3426) + * Enhanced `dictdump` module functions regarding overwriting existing files (PR #3376) + +* `silx.gui`: + + * Added scale to visible or selected area buttons options to `silx.gui.dialog.ColormapDialog` (PR #3365) + * Fixed and enhanced`silx.gui.utils.glutils.isOpenGLAvailable` (PR #3356, #3385) + * Fixed `silx.gui.widgets.FlowLayout` (PR #3389) + * Enhanced `silx.gui.data.ArrayTableWidget`: Added support of array clipping if data is too large (PR #3419) + + * `silx.gui.plot`: + + * Added mask support to Image items and use it in plot tools (histogram, profile, colormap) (PR #3369, #3381) + * Added `ImageStack` methods to configure automatic reset zoom (PR #3373) + * Added some statistic indicators in `PixelIntensitiesHistoAction` action (PR #3391) + * Enhanced `silx.gui.plot.ImageView` integration of ROI profiles in side plots (PR #3380) + * Enhanced `PositionInfo`: snapping to histogram (PR #3405) and information labels layout (PR #3399) + * Fixed `LegendSelector` blinking when updated (PR #3346) + * Fixed profile tool issue when closing profile window after attaced PlotWidget (PR #3375) + * Fixed histogram action (PR #3396) + * Fixed support of histogram plot items in `stats` module (PR #3398, #3407) + * Fixed `ColorBar` when deleting attached PlotWidget (PR #3403) + + * `silx.gui.plot.PlotWidget`: + + * Added `getValueData` method to image items (PR #3378) + * Added `discardItem` method (PR #3400) + * Added unified `selection()` handler compatible with active item management (PR #3401) + * Fixed `addCurve` documentation (PR #3371) + * Fixed complex image first displayed mode (PR #3364) + * Fixed curve and scatter items support of complex data input (PR #3384) + * Fixed histogram picking (PR #3405) + * Fixed rendering (PR #3416) + + * `silx.gui.plot3d`: + + * Added `HeightMapData` and `HeightMapRGBA` items (PR #3386, #3397) + * Fixed support for RGB colored points in internal scene graph (PR #3374) + * Fixed `ImageRgba` alpha channel display (PR #3414) + +* `silx.image`: + + * Added mask support to `bilinear` interpolator (PR #3286) + +* `silx.opencl`: + + * Added print statics of OpenCL kernel execution time (PR #3395) + +* Miscellaneous: + + * Removed debian 9 packaging (PR #3383) + * Enhanced test functions: `silx.test.run_tests` (PR #3331), `silx.utils.testutils.TestLogging` (PR #3393) + * Continuous integration: Added github actions and removed travis-ci (PR #3353, #3359), fixed (PR #3361, #3366) + * Updated documentation (PR #3383, #3387, #3409, #3416, #3427) + * Fixed debian packaging (PR #3362) + * Fixed `silx test` application on Windows (PR #3411) + +0.14.1: 2021/04/30 +------------------ + +This is a bug-fix version of silx. + +* silx.gui.plot: Fixed `PlotWidget` OpenGL backend memory leak (PR #3445) +* silx.gui.utils.glutils: Fixed `isOpenGLAvailable` (PR #3356) + +0.14.0: 2020/12/11 +------------------ + +This is the first version of `silx` supporting `h5py` >= v3.0. + +This is the last version of `silx` officially supporting Python 3.5. + +* `silx.gui`: + + * Added support for HDF5 external data (virtual and raw) (PR #3222) + * Added lazy update handling of OpenGL textures (PR #3205) + * Deprecated `silx.gui.plot.matplotlib` module (use `silx.gui.utils.matplotlib` instead) (PR #3158) + * Improved memory allocation by using already defined `fontMetrics` instread of creating a new one (PR #3239) + * Make `TextFormatter` compatible with `h5py`>=3 (PR #3253) + * Fixed `matplotlib` 3.3.0rc1 deprecation warnings (PR #3145) + + * `silx.gui.colors.Colormap`: + + * Added `Colormap.get|setNaNColor` to change color used for NaN, fix different NaN displays for matplotlib/openGL backends (PR #3143) + * Refactored PlotWidget OpenGL backend to enable extensions (PR #3147) + * Fixed use of `QThreadPool.tryTake` to be Qt5.7 compliant (PR #3250) + + * `silx.gui.plot`: + + * Added the feature to compute statistics inside a specific region of interest (PR #3056) + * Added an action to switch on/off OpenGL rendering on a plot (PR #3261) + * Added test for ROI interaction mode (PR #3283) + * Added saving of error bars when saving a plot (PR #3199) + * Added `ImageStack.clear` (PR #3167) + * Improved image profile tool to support `PlotWidget` item extension (PR #3150) + * Improved `Stackview`: replaced `setColormap` `autoscale` argument by `scaleColormapRangeToStack` method (PR #3279) + * Updated `3 stddev` autoscale algorithm, clamp it with the minmax data in order to improve the contrast (PR #3284) + * Updated ROI module: splitted into 3 modules base/common/arc_roi (PR #3283) + * Fixed `ColormapDialog` custom range input (PR #3153) + * Fixed issue when changing ROI mode while a ROI is being created (PR #3186) + * Fixed `RegionOfInterest` refresh when highlighted (PR #3197) + * Fixed arc roi shape: make sure start and end points are part of the shape (PR #3257) + * Fixed issue in `Colormap` `3 stdev` autoscale mode and avoided warnings (PR #3295) + + * Major improvements of `PlotWidget`: + + * Added `get|setAxesMargins` methods to control margin ratios around plot area (PR #3196) + * Added `PlotWidget.[get|set]Backend` enabling switching backend (PR #3255) + * Added multi interaction mode for ROIs (can be switched with a single click on an handle, or the context menu) (PR #3260) + * Added polar interaction mode for arc ROI (PR #3260) + * Added `PlotWidget.sigDefaultContextMenu` to allow to feed the default context menu (PR #3260) + * Added context menu to the selected ROI to remove it (PR #3260) + * Added pan interaction to ROI authoring (`select-draw`) interaction mode (PR #3291) + * Added support of right axis label with OpenGL backend (PR #3293) + * Added item visible bounds feature to PlotWidget items (PR #3223) + * Added a `DataItem` base class for items having a "data extent" in the plot (PR #3212) + * Added support for float16 texture in OpenGL backend (PR #3194) + * Improved support of high-DPI screen in OpenGL backend (PR #3203) + * Updated: Use points rather than pixels for marker size and line width with OpenGL backend (PR #3203) + * Updated: Expose `PlotWidget` colors as Qt properties (PR #3269) + * Fixed time serie axis for range < 2.5 microseconds (PR #3195) + * Fixed initial size of OpenGL backend (PR #3209) + * Fixed `PlotWidget` image items displayed below the grid by default (PR #3235) + * Fixed OpenGL backend image display with sqrt colormap normalization (PR #3248) + * Fixed support of shapes with multiple polygons in the OpenGL backend (PR #3259) + * Fixes duplicated callback on ROIs (there was one for each ROI managed created on the plot) (PR #3260) + * Fixed RegionOfInterest `contains` methods (PR #3336) + + * `silx.gui.colors.plot3d`: + + * Improved scene rendering (PR #3149) + * Fixed handling of transparency of cut plane (PR #3204) + +* `silx.image`: + + * Fixed slow `image.tomography.get_next_power()` (PR #3168) + +* `silx.io`: + + * Added support for HDF5 link preservation in `dictdump` (PR #3224) + * Added support for numpy arrays of `numbers` (PR #3251) + * Make `h5todict` resilient to issues in the HDF5 file (PR #3162) + +* `silx.math`: + + * Improved colormap performances for small datasets (PR #3282) + +* `silx.opencl`: + + * Added textures availability check (PR #3273) + * Added a warning when there is an issue in the Ocl destruction (PR #3280) + * Fixed Sift test on modern GPU (PR #3262) + +* Miscellaneous: + + * Added HDF5 strings: handle `h5py` 2.x and 3.x (PR #3240) + * Fixed `cython` 3 compatibility and deprecation warning (PR #3164, #3189) + + +0.13.2: 2020/09/15 +------------------ + +Minor release: + +* silx view application: Prevent collapsing browsing panel, Added `-f` command line option (PR #3176) + +* `silx.gui`: + + * `silx.gui.data`: Fixed `DataViews.titleForSelection` method (PR #3171). + * `silx.gui.plot.items`: Added `DATA_BOUNDS` visualization parameter for `Scatter` item histogram bounds (PR #3180) + * `silx.gui.plot.PlotWidget`: Fixed support of curves with infinite data (PR #3175) + * `silx.gui.utils.glutils`: Fixed `isOpenGLAvailable` function (PR #3184) + +* Documentation: + + * Update silx view command line options documentation (PR #3173) + * Update version number and changelog (PR #3190) + + +0.13.1: 2020/07/22 +------------------ + +Bug fix release: + +* `silx.gui.plot.dialog`: Fixed `ColormapDialog` custom range input (PR #3155) +* Build: Fixed cython 3 compatibility (PR #3163). +* Documentation: Update version number and changelog (PR #3156) + + +0.13.0: 2020/06/23 +------------------ + +This version drops the support of Python 2.7 and Python <= 3.4. + +* silx view application: + + * Added support of compound data (PR #2948) + * Added `Close All` menu (PR #2963) + * Added default title to plots (PR #2979, #2999) + * Added a button to enable/disable file content sorting (PR #3132) + * Added support of a `SILX_style` HDF5 attribute to provide axes and colormap scale (PR #3092) + * Improved `HDF5TableView` information table to make text selectable and ease copy (PR #2903) + * Fixes (PR #2881, #2902, #3083) + +* `silx.gui`: + + * `silx.gui.colors.Colormap`: + + * Added mean+/-3std autoscale mode (PR #2877, #2900) + * Added sqrt, arcsinh and gamma correction colormap normalizations (PR #3010, #3054, #3057, #3066, #3070, #3133) + * Limit number of threads used for computing the colormap (PR #3073) + * Reordered colormaps (PR #3137) + + * `silx.gui.dialog.ColormapDialog`: Improved widget (PR #2874, #2915, #2924, #2954, #3136) + * `silx.gui.plot`: + + * Major rework/extension of the regions of interest (ROI) (PR #3007, #3008, #3018, #3020, #3022, #3026, #3029, #3044, #3045, #3055, #3059, #3074, #3076, #3078, #3079, #3081, #3131) + * Major rework/extension of the profile tools (PR #2933, #2980, #2988, #3004, #3011, #3037, #3048, #3058, #3084, #3088, #3095, #3097) + * Added `silx.gui.plot.ImageStack` widget (PR #2480) + * Added support of scatter in `PixelIntensitiesHistoAction` (PR #3089, #3107) + * Added auto update of `FitAction` fitted data and range (PR #2960, #2961, #2969, #2981) + * Improved mask tools (PR #2986) + * Fixed `PlotWindow` (PR #2965) and `MaskToolsWidget` (PR #3125) + + * `silx.gui.plot.PlotWidget`: + + * Changed behaviour of `PlotWidget.addItem` and `PlotWidget.removeItem` to handle object items (previous behavior deprecated, not removed) and added `PlotWidget.addShape` method to add `Shape` items (PR #2873, #2904, #2919, #2925, #3120) + * Added support of uint16 RGBA images (PR #2889) + * Improved interaction (PR #2909, #3014, #3033) + * Fixed `PlotWidget` (PR #2884, #2901, #2970, #3002) + * Fixed and cleaned-up backends (PR #2887, #2910, #2913, #2957, #2964, #2984, #2991, #3023, #3064, #3135) + + * `silx.gui.plot.items`: + + * Added `sigDragStarted` and `sigDragFinished` signals to marker items and `sigEditingStarted` and `sigEditingFinished` signals to region of interest items (PR #2754) + * Added `XAxisExtent` and `YAxisExtent` items in `silx.gui.plot.items` to control the plot data extent (PR #2932) + * Added `ImageStack` item (PR #2994) + * Added `Scatter` item histogram visualization mode (PR #2912, #2923) + * Added `isDragged` method to marker items (PR #3000) + * Improved performance of colormapped items by caching data min/max (PR #2876, #2886) + * Improved `Scatter` item regular grid (PR #2918) and irregular grid (PR #3108) visualizations + + * `silx.gui.qt`: + + * Changed behavior of `QObject` multiple-inheritance (PR #3052) + * Limit `silxGlobalThreadPool` function to use 4 threads maximum (PR #3072) + + * `silx.gui.utils.glutils`: Added `isOpenGLAvailable` to check the availability of OpenGL (PR #2878) + * `silx.gui.widgets`: + + * Added `ElidedLabel` widget (PR #3110, #3111) + * Fixed `LegendIconWidget` (PR #3112) + +* `silx.io`: + + * Added support of signal dataset name-based errors to NXdata (PR #2976) + * Added `dicttonx` function and support of HDF5 attibutes in `dicttoh5` function (PR #3013, #3017, #3031, #3093) + * Fixed `url.DataUrl.path` (PR #2973) + +* `silx.opencl`: + + * Fixed issue with Python 3.8 (PR #3036) + * Disable textures for Nvidia Fermi GPUs for `convolution` (PR #3101) + +* Miscellaneous: + + * Requires fabio >= 0.9 (PR #2937) + * Fixed compatibility with h5py<v2.9 (PR #3024), cython 3 (PR #3034) + * Avoid deprecation warnings (PR #3104) from Python 3.7 (PR #3012), Python 3.8 (PR #2891, #2934, #2989, #2993, #3127), h5py (PR #2854, #2893), matplotlib (PR #2890), fabio (PR #2930) and numpy (PR #3129) + * Use `numpy.errstate` to ignore warnings rather than the `warnings` module (PR #2920) + +* Build, documentation and tests: + + * Dropped Python2 support (PR #3119, #3140) and removed Python 2 tests and packaging (PR #2838, #2917) + * Added debian 11/Ubuntu 20.04 packaging (PR #2875) + * Improved test environment (PR #2870, #2949, #2995, #3009, #3061, #3086, #3087, #3122), documentation (PR #2872, #2894, #2937, #2987, #3042, #3053, #3068, #3091, #3103, #3115) and sample code (PR #2978, #3130, #3138) + * Fixed Windows "fat binary" build (PR #2971) + + +0.12.0: 2020/01/09 +------------------ + +Python 2.7 is no longer officially supported (even if tests pass and most of the library should work). + +* silx view application: + + * Added: keep the same axes selection when changing dataset except for the stack view (PR #2701, #2780) + * Added a Description column in the browsing tree to display NeXus title or name (PR #2804) + * Added support of URL as filename (PR #2750) + * Behavior changed: no longer lock HDF5 files by default, can be changed with `--hdf5-file-locking` option (PR #2861) + +* `silx.gui`: + + * `silx.gui.plot`: + + * Added scatter plot regular and irregular grid visualization mode (PR #2810, #2815, #2820, #2824, #2831) + * Added `baseline` argument to `PlotWidget` `addCurve` and `addHistogram` methods (PR #2715) + * Added right axis support to `PlotWidget` marker items (PR #2744) + * Added `BoundingRect` `PlotWidget` item (PR #2823) + * Added more markers to `PlotWidget` items using symbols (PR #2792) + * Improved and fixed `PlotWidget` and backends rendering and picking to guarantee rendering order of items (PR #2602, #2694, #2726, #2728, #2730, #2731, #2732, #2734, #2746, #2800, #2822, #2829, #2851, #2853) + * Improved `RegionOfInterest`: Added `sigItemChanged` signal, renamed `get|setLabel` to `get|setName` (PR #2684, #2729, #2794, #2803, #2860) + * Improved `StackView`: Allow to save dataset to HDF5 (PR #2813) + + * `silx.gui.plot3d`: + + * Added colormapped isosurface display to `ComplexField3D` (PR #2675) + + * Miscellaneous: + + * Added `cividis` colormap (PR #2763) + * Added `silx.gui.widgets.ColormapNameComboBox` widget (PR #2814) + * Added `silx.gui.widgets.LegendIconWidget` widget (PR #2783) + * Added `silx.gui.utils.blockSignals` context manager (PR #2697, #2702) + * Added `silx.gui.utils.qtutils.getQEventName` function (PR #2725) + * Added `silx.gui.colors.asQColor` function (PR #2753) + * Minor fixes (PR #2662, #2667, #2674, #2719, #2724, #2747, #2757, #2760, #2766, #2789, #2798, #2799, #2805, #2811, #2832, #2834, #2839, #2849, #2852, #2857, #2864, #2867) + +* `silx.opencl`: + + * Added `silx.opencl.sparse.CSR` with support of different data types (PR #2671) + * Improved support of different platforms like PoCL (PR #2669, #2698, #2806) + * Moved non-OpenCL related utilities to `silx.opencl.utils` module (PR #2782) + * Fixed `silx.opencl.sinofilter.SinoFilter` to avoid importing scikit-cuda (PR #2721) + * Fixed kernel garbage collection (PR #2708) + * Fixed `silx.opencl.convolution.Convolution` (PR #2781) + +* `silx.math`/`silx.image`: + + * Added trilinear interpolator: `silx.math.interpolate.interp3d` (PR #2678) + * Added `silx.image.utils.gaussian_kernel` function (PR #2782) + * Improved `silx.image.shapes.Polygon` argument check (PR #2761) + * Fixed and improved `silx.math.fft` with FFTW backend (PR #2751) + * Fixed support of not finite data in fit manager (PR #2868) + +* `silx.io`: + + * Added `asarray=True` argument to `silx.io.dictdump.h5todict` function (PR #2692, #2767) + * Improved `silx.io.utils.DataUrl` (PR #2790) + * Increased max number of motors in `specfile` (PR #2817) + * Fixed data conversion when reading images with `fabio` (PR #2735) + +* Build, documentation and tests: + + * Added `Cython` as a build dependency (PR #2795, #2807, #2808) + * Added Debian 10 packaging (PR #2670, #2672, #2666, #2686, #2706) + * Improved documentation (PR #2673, #2680, #2679, #2772, #2759, #2779, #2801, #2802, #2833, #2857, #2869) + * Improved testing tools (PR #2704, #2796, #2818) + * Improved `bootstrap.py` script (PR #2727, #2733) + + +0.11.0: 2019/07/03 +------------------ + + * Graphical user interface: + + * Plot: + + * Add sample code on how to update a plot3d widget from a thread + * ScatterPlot: add the possibility to plot as a surface using Delaunay triangulation + * ScatterView: add a tool button to change scatter visualization mode (ex. Solid) + * (OpenGL backend) Fix memory leak when creating/deleting widgets in a loop + + + * Plot3D: + + * Add an action to toggle plot3d's `PositionInfoWidget` picking. + * Add a 3D complex field visualization: Complex3DField (also available from silx view) + * Add a PositionInfoWidget and a tool button to toggle the picking mode to SceneWindow + * Add the possibility to render the scene with linear fog. + + * `silx.gui.widgets`: + + * Fix ImageFileDialog selection for a cube with shape like `1,y,x`. + + * Miscellaneous: + + * Requires numpy version >= 1.12 + * HDF5 creator script + * Support of Python 3.4 is dropped. Please upgrade to at least Python 3.5. + * This is the last version to officially support Python 2.7. + * The source code is Python 3.8 ready. + * Improve PySide2 support. PyQt4 and PySide are deprecated. + + + +0.10.0: 2019/02/19 +------------------ + + * Graphical user interface: + + * Plot: + + * Add support of foreground color + * Fix plot background colors + * Add tool to mask ellipse + * StatsWidget: + + * Add support for plot3D widgets + * Add a PyMca like widget + + * `Colormap`: Phase colormap is now editable + * `ImageView`: Add ColorBarWidget + * `PrintPreview`: + + * Add API to define 'comment' and 'title' + * Fix resizing in PyQt5 + + * Selection: Allow style definition + * `ColormapDialog`: display 'values' plot in log if colormap uses log + * Synchronize ColorBar with plot background colors + * `CurvesROIWidget`: ROI is now an object. + + * Plot3D: + + * `SceneWidget`: add ColormapMesh item + * Add compatibility with the StatsWidget to display statistic on 3D volumes. + * Add `ScalarFieldView.get|setOuterScale` + * Fix label update in param tree + * Add `ColormapMesh` item to the `SceneWidget` + + * HDF5 tree: + + * Allow URI drop + * Robustness of hdf5 tree with corrupted files + + * `silx.gui.widgets`: + + * Add URL selection table + + * Input/output: + + * Support compressed Fabio extensions + * Add a function to create external dataset for .vol file + + * `silx view`: + + * Support 2D view for 3D NXData + * Add a NXdata for complex images + * Add a 3d scalar field view to the NXdata views zoo + * Improve shortcuts, view loading + * Improve silx view loading, shortcuts and sliders ergonomy + * Support default attribute pointing to an NXdata at any group level + + * `silx convert` + + * Allow to use a filter id for compression + + * Math: + + * fft: multibackend fft + + * OpenCL: + + * Compute statistics on a numpy.ndarray + * Backprojection: + + * Add sinogram filters (SinoFilter) + * Input and/or output can be device arrays. + + * Miscellaneous: + + * End of PySide support (use PyQt5) + * Last version supporting numpy 1.8.0. Next version will drop support for numpy < 1.12 + * Python 2.7 support will be dropped before end 2019. From version 0.11, a deprecation warning will be issued. + * Remove some old deprecated methods/arguments + * Set Cython language_level to 3 + 0.9.0: 2018/10/23 ----------------- @@ -67,7 +1157,7 @@ Change Log * Graphical user interface: * Plot: - + * Adds support of x-axis date/time ticks for time series display (see `silx.gui.plot.items.XAxis.setTickMode`) * Adds support of interactive authoring of regions of interest (see `silx.gui.plot.items.roi` and `silx.gui.plot.tools.roi`) * Adds `StatsWidget` widget for displaying statistics on data displayed in a `PlotWidget` @@ -201,7 +1291,7 @@ Change Log * OpenCl. Tomography. Implement a filtered back projection. * Add a *PrintPreview* widget and a *PrintPreviewToolButton* for *PlotWidget*. * Plot: - + * Add a context menu on right click. * Add a *ComplexImageView* widget. * Merged abstract *Plot* class with *PlotWidget* class. @@ -212,14 +1302,14 @@ Change Log * Refactor plot actions, new sub-package *silx.gui.plot.actions*. * Add signals on *PlotWidget* items notifying updates. * Mask. Support loading of TIFF images. - + * Plot3d: - + * Rework toolbar and interaction to use only the left mouse button. * Support any colormap. - + * Hdf5TreeView: - + * Add an API to select a single tree node item (*setSelectedH5Node*) * Better support and display of types. * New column for displaying the kind of links. @@ -229,25 +1319,25 @@ Change Log * Median filter. Add new modes (*reflect, mirror, shrink*) in addition to *nearest*. * IO: - + * Rename module *spectoh5* to *convert*. Add support for conversion of *fabio* formats. * Support NPZ format. * Support opening an URI (*silx.io.open(filename::path)*). * *Group* methods *.keys*, *.value* and *.items* now return lists in Python 2 and iterators in Python 3. - + * Image. Add tomography utils: *phantomgenerator* to produce Shepp-Logan phantom, function to compute center of rotation (*calc_center_corr*, *calc_center_centroid*) and rescale the intensity of an image (*rescale_intensity*). - + * Commands: - + * *silx view*: - + * Add command line option *--use-opengl-plot*. * Add command line option *--debug*, to print dataset reading errors. * Support opening URI (*silx view filename::path*). - + * *silx convert*. New command line application to convert supported data files to HDF5. - + * Enable usage of *silx.resources* for other projects. * The *silx* license is now fully MIT. @@ -256,7 +1346,7 @@ Change Log ----------------- * Adds OpenGL backend to 1D and 2D graphics - * Adds Object Oriented plot API with Curve, Histogram, Image, ImageRgba and Scatter items. + * Adds Object Oriented plot API with Curve, Histogram, Image, ImageRgba and Scatter items. * Implements generic launcher (``silx view``) * NXdataViewer. Module providing NeXus NXdata support * Math/OpenCL. Implementation of median filter. @@ -269,7 +1359,7 @@ Change Log * ROIs. Simplification of API: setRois, getRois, calculateRois. * ROIs. Correction of calculation bug when the X-axis values were not ordered. * Sift. Moves package from ``silx.image`` to ``silx.opencl``. - + 0.4.0: 2017/02/01 ----------------- @@ -283,7 +1373,7 @@ Change Log * Adds pixel intensity histogram action * Adds histogram parameter to addCurve * Refactoring. Create silx.gui.data (include widgets for data) - * Refactoring. Rename utils.load as silx.io.open + * Refactoring. Rename utils.load as silx.io.open * Changes active curve behavior in Plot. No default active curve is set by default * Fit Action. Add polynomial functions and background customization * PlotWindow. Provide API to access toolbar actions @@ -305,7 +1395,7 @@ Change Log * Adds HDF5 load API (supporting Spec files) to silx.io.utils module * Adds SpecFile support for multiple MCA headers * Adds HDF5 TreeView - * Adds FitManager to silx.math.fit and FitWidget to silx.gui.fit + * Adds FitManager to silx.math.fit and FitWidget to silx.gui.fit * Adds ThreadPoolPushButton to silx.gui.widgets * Adds getDataRange function to plot widget * Adds loadUi, Slot and Property to qt.py |