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diff --git a/silx/math/histogramnd/src/histogramnd_template.c b/silx/math/histogramnd/src/histogramnd_template.c
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-/*##########################################################################
-# Copyright (C) 2016 European Synchrotron Radiation Facility
-#
-# Permission is hereby granted, free of charge, to any person obtaining a copy
-# of this software and associated documentation files (the "Software"), to deal
-# in the Software without restriction, including without limitation the rights
-# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-# copies of the Software, and to permit persons to whom the Software is
-# furnished to do so, subject to the following conditions:
-#
-# The above copyright notice and this permission notice shall be included in
-# all copies or substantial portions of the Software.
-#
-# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
-# THE SOFTWARE.
-#
-# ############################################################################*/
-
-#include "templates.h"
-
-#include <stdio.h>
-#include <stdlib.h>
-#include <math.h>
-#include <stdarg.h>
-
-#ifdef HISTO_SAMPLE_T
-#ifdef HISTO_WEIGHT_T
-#ifdef HISTO_CUMUL_T
-
-int TEMPLATE(histogramnd, HISTO_SAMPLE_T, HISTO_WEIGHT_T, HISTO_CUMUL_T)
- (HISTO_SAMPLE_T *i_sample,
- HISTO_WEIGHT_T *i_weights,
- int i_n_dim,
- int i_n_elem,
- double *i_bin_ranges,
- int *i_n_bins,
- uint32_t *o_histo,
- HISTO_CUMUL_T *o_cumul,
- double *o_bin_edges,
- int i_opt_flags,
- HISTO_WEIGHT_T i_weight_min,
- HISTO_WEIGHT_T i_weight_max)
-{
- /* some counters */
- int i = 0, j = 0;
- long elem_idx = 0;
-
- HISTO_WEIGHT_T * weight_ptr = 0;
- HISTO_SAMPLE_T elem_coord = 0.;
-
- /* computed bin index (i_sample -> grid) */
- long bin_idx = 0;
-
- double * g_min = 0;
- double * g_max = 0;
- double * range = 0;
-
- /* ================================
- * Parsing options, if any.
- * ================================
- */
-
- int filt_min_weight = 0;
- int filt_max_weight = 0;
- int last_bin_closed = 0;
-
- /* Testing the option flags */
- if(i_opt_flags & HISTO_WEIGHT_MIN)
- {
- filt_min_weight = 1;
- }
-
- if(i_opt_flags & HISTO_WEIGHT_MAX)
- {
- filt_max_weight = 1;
- }
-
- if(i_opt_flags & HISTO_LAST_BIN_CLOSED)
- {
- last_bin_closed = 1;
- }
-
- /* storing the min & max bin coordinates in their own arrays because
- * i_bin_ranges = [[min0, max0], [min1, max1], ...]
- * (mostly for the sake of clarity)
- * (maybe faster access too?)
- */
- g_min = (double *) malloc(i_n_dim *sizeof(double));
- g_max = (double *) malloc(i_n_dim * sizeof(double));
- /* range used to convert from i_coords to bin indices in the grid */
- range = (double *) malloc(i_n_dim * sizeof(double));
-
- if(!g_min || !g_max || !range)
- {
- free(g_min);
- free(g_max);
- free(range);
- return HISTO_ERR_ALLOC;
- }
-
- j = 0;
- for(i=0; i<i_n_dim; i++)
- {
- g_min[i] = i_bin_ranges[i*2];
- g_max[i] = i_bin_ranges[i*2+1];
- range[i] = g_max[i]-g_min[i];
-
- for(bin_idx=0; bin_idx<i_n_bins[i]; j++, bin_idx++)
- {
- o_bin_edges[j] = g_min[i] +
- bin_idx * (range[i] / i_n_bins[i]);
- }
- o_bin_edges[j++] = g_max[i];
- }
-
- weight_ptr = i_weights;
-
- if(!i_weights)
- {
- /* if weights are not provided there no point in trying to filter them
- * (!! careful if you change this, some code below relies on it !!)
- */
- filt_min_weight = 0;
- filt_max_weight = 0;
-
- /* If the weights array is not provided then there is no point
- * updating the weighted histogram, only the bin counts (o_histo)
- * will be filled.
- * (!! careful if you change this, some code below relies on it !!)
- */
- o_cumul = 0;
- }
-
- /* tried to use pointers instead of indices here, but it didn't
- * seem any faster (probably because the compiler
- * optimizes stuff anyway),
- * so i'm keeping the "indices" version, for the sake of clarity
- */
- for(elem_idx=0;
- elem_idx<i_n_elem*i_n_dim;
- elem_idx+=i_n_dim, weight_ptr++)
- {
- /* no testing the validity of weight_ptr here, because if it is NULL
- * then filt_min_weight/filt_max_weight will be 0.
- * (see code above)
- */
- if(filt_min_weight && *weight_ptr<i_weight_min)
- {
- continue;
- }
- if(filt_max_weight && *weight_ptr>i_weight_max)
- {
- continue;
- }
-
- bin_idx = 0;
-
- for(i=0; i<i_n_dim; i++)
- {
- elem_coord = i_sample[elem_idx+i];
-
- /* =====================
- * Element is rejected if any of the following is NOT true :
- * 1. coordinate is >= than the minimum value
- * 2. coordinate is <= than the maximum value
- * 3. coordinate==maximum value and last_bin_closed is True
- * =====================
- */
- if(elem_coord<g_min[i])
- {
- bin_idx = -1;
- break;
- }
-
- /* Here we make the assumption that most of the time
- * there will be more coordinates inside the grid interval
- * (one test)
- * than coordinates higher or equal to the max
- * (two tests)
- */
- if(elem_coord<g_max[i])
- {
- /* Warning : the following factorization seems to
- * increase the effect of precision error.
- * bin_idx = (long)floor(
- * (bin_idx +
- * (elem_coord-g_min[i])/range[i]) *
- * i_n_bins[i]
- * );
- */
-
- /* Not using floor to speed up things.
- * We don't (?) need all the error checking provided by
- * the built-in floor().
- * Also the value is supposed to be always positive.
- */
- bin_idx = bin_idx * i_n_bins[i] +
- (long)(
- ((elem_coord-g_min[i]) * i_n_bins[i]) /
- range[i]
- );
- }
- else /* ===> elem_coord>=g_max[i] */
- {
- /* if equal and the last bin is closed :
- * put it in the last bin
- * else : discard
- */
- if(last_bin_closed && elem_coord==g_max[i])
- {
- bin_idx = (bin_idx + 1) * i_n_bins[i] - 1;
- }
- else
- {
- bin_idx = -1;
- break;
- }
- } /* if(elem_coord<g_max[i]) */
-
- } /* for(i=0; i<i_n_dim; i++) */
-
- /* element is out of the grid */
- if(bin_idx==-1)
- {
- continue;
- }
-
- if(o_histo)
- {
- o_histo[bin_idx] += 1;
- }
- if(o_cumul)
- {
- /* not testing the pointer since o_cumul is null if
- * i_weights is null.
- */
- o_cumul[bin_idx] += (HISTO_CUMUL_T) *weight_ptr;
- }
-
- } /* for(elem_idx=0; elem_idx<i_n_elem*i_n_dim; elem_idx+=i_n_dim) */
-
- free(g_min);
- free(g_max);
- free(range);
-
- /* For now just returning 0 (OK) since all the checks are done in
- * python. This might change later if people want to call this
- * function directly from C (might have to implement error codes).
- */
- return HISTO_OK;
-}
-
-#endif
-#endif
-#endif