diff options
Diffstat (limited to 'silx/math/medianfilter')
| -rw-r--r-- | silx/math/medianfilter/__init__.py | 2 | ||||
| -rw-r--r-- | silx/math/medianfilter/include/median_filter.hpp | 154 | ||||
| -rw-r--r-- | silx/math/medianfilter/median_filter.pxd | 3 | ||||
| -rw-r--r-- | silx/math/medianfilter/medianfilter.cpp | 13266 | ||||
| -rw-r--r-- | silx/math/medianfilter/medianfilter.pyx | 145 | ||||
| -rw-r--r-- | silx/math/medianfilter/test/test_medianfilter.py | 446 |
6 files changed, 8989 insertions, 5027 deletions
diff --git a/silx/math/medianfilter/__init__.py b/silx/math/medianfilter/__init__.py index fd5c90c..2b05f06 100644 --- a/silx/math/medianfilter/__init__.py +++ b/silx/math/medianfilter/__init__.py @@ -27,4 +27,4 @@ __license__ = "MIT" __date__ = "02/05/2017" -from .medianfilter import * +from .medianfilter import (medfilt, medfilt1d, medfilt2d) diff --git a/silx/math/medianfilter/include/median_filter.hpp b/silx/math/medianfilter/include/median_filter.hpp index da1f9fe..78d6c5a 100644 --- a/silx/math/medianfilter/include/median_filter.hpp +++ b/silx/math/medianfilter/include/median_filter.hpp @@ -32,11 +32,21 @@ #include <assert.h> #include <algorithm> #include <signal.h> +#include <iostream> + +// Modes for the median filter +enum MODE{ + NEAREST=0, + REFLECT=1, + MIRROR=2, + SHRINK=3 +}; // Simple function browsing a deque and registring the min and max values // and if those values are unique or not template<typename T> -void getMinMax(std::vector<const T*>& v, T& min, T&max){ +void getMinMax(std::vector<const T*>& v, T& min, T&max, + typename std::vector<const T*>::const_iterator end){ // init min and max values typename std::vector<const T*>::const_iterator it = v.begin(); if (v.size() == 0){ @@ -47,7 +57,7 @@ void getMinMax(std::vector<const T*>& v, T& min, T&max){ it++; // Browse all the deque - while(it!=v.end()){ + while(it!=end){ // check if repeated (should always be before min/max setting) if(*(*it) > max) max = *(*it); if(*(*it) < min) min = *(*it); @@ -61,10 +71,56 @@ bool cmp(const T* a, const T* b){ return *a < *b; } +// apply the median filter only on limited part of the vector template<typename T> -const T* median(std::vector<const T*>& v) { - std::nth_element(v.begin(), v.begin() + v.size()/2, v.end(), cmp<T>); - return v[v.size()/2]; +const T* median(std::vector<const T*>& v, int window_size) { + std::nth_element(v.begin(), v.begin() + window_size/2, v.begin()+window_size, cmp<T>); + return v[window_size/2]; +} + +template<typename T> +void print_window(std::vector<const T*>& v, + typename std::vector<const T*>::const_iterator end){ + typename std::vector<const T*>::const_iterator it; + for(it = v.begin(); it != end; ++it){ + std::cout << *(*it) << " "; + } + std::cout << std::endl; +} + +// return the index into 0, (length_max - 1) in reflect mode +int reflect(int index, int length_max){ + int res = index; + // if the index is negative get the positive symetrical value + if(res < 0){ + res += 1; + res = -res; + } + // then apply the reflect algorithm. Frequence is 2 max length + res = res % (2*length_max); + if(res >= length_max){ + res = 2*length_max - res -1; + res = res % length_max; + } + return res; +} + +// return the index into 0, (length_max - 1) in mirror mode +int mirror(int index, int length_max){ + int res = index; + // if the index is negative get the positive symetrical value + if(res < 0){ + res = -res; + } + + int rightLimit = length_max -1; + // apply the redundancy each two right limit + res = res % (2*rightLimit); + if(res >= length_max){ + int distToRedundancy = (2*rightLimit) - res; + res = distToRedundancy; + } + return res; } // Browse the column of pixel_x @@ -74,21 +130,22 @@ void median_filter( T* output, int* kernel_dim, // two values : 0:width, 1:height int* image_dim, // two values : 0:width, 1:height - int x_pixel, // the x pixel to process - int y_pixel_range_min, - int y_pixel_range_max, - bool conditional){ + int y_pixel, // the x pixel to process + int x_pixel_range_min, + int x_pixel_range_max, + bool conditional, + int pMode){ assert(kernel_dim[0] > 0); assert(kernel_dim[1] > 0); - assert(x_pixel >= 0); + assert(y_pixel >= 0); assert(image_dim[0] > 0); assert(image_dim[1] > 0); - assert(x_pixel >= 0); - assert(x_pixel < image_dim[0]); - assert(y_pixel_range_max < image_dim[1]); - assert(y_pixel_range_min <= y_pixel_range_max); - // # kernel odd + assert(y_pixel >= 0); + assert(y_pixel < image_dim[0]); + assert(x_pixel_range_max < image_dim[1]); + assert(x_pixel_range_min <= x_pixel_range_max); + // kernel odd assertion assert((kernel_dim[0] - 1)%2 == 0); assert((kernel_dim[1] - 1)%2 == 0); @@ -96,42 +153,75 @@ void median_filter( int halfKernel_x = (kernel_dim[1] - 1) / 2; int halfKernel_y = (kernel_dim[0] - 1) / 2; + MODE mode = static_cast<MODE>(pMode); + // init buffer - // fill the buffer for the first iteration - // we are treating std::vector<const T*> window_values(kernel_dim[0]*kernel_dim[1]); - for(int pixel_y=y_pixel_range_min; pixel_y <= y_pixel_range_max; pixel_y ++ ){ + for(int x_pixel=x_pixel_range_min; x_pixel <= x_pixel_range_max; x_pixel ++ ){ typename std::vector<const T*>::iterator it = window_values.begin(); // fill the vector - for(int win_y=pixel_y-halfKernel_y; win_y<= pixel_y+halfKernel_y; win_y++) + for(int win_y=y_pixel-halfKernel_y; win_y<= y_pixel+halfKernel_y; win_y++) { for(int win_x = x_pixel-halfKernel_x; win_x <= x_pixel+halfKernel_x; win_x++) { - int index_x = std::min(std::max(win_x, 0), image_dim[0] - 1); - int index_y = std::min(std::max(win_y, 0), image_dim[1] - 1); - *it = (&input[index_y*image_dim[0] + index_x]); + int index_x = win_x; + int index_y = win_y; + switch(mode){ + case NEAREST: + index_x = std::min(std::max(win_x, 0), image_dim[1] - 1); + index_y = std::min(std::max(win_y, 0), image_dim[0] - 1); + break; + + case REFLECT: + index_x = reflect(win_x, image_dim[1]); + index_y = reflect(win_y, image_dim[0]); + break; + + case MIRROR: + index_x = mirror(win_x, image_dim[1]); + index_y = mirror(win_y, image_dim[0]); + break; + case SHRINK: + if((index_x < 0) || (index_x > image_dim[1] -1)){ + continue; + } + if((index_y < 0) || (index_y > image_dim[0] -1)){ + continue; + } + break; + } + *it = (&input[index_y*image_dim[1] + index_x]); ++it; } } - const T* currentPixelValue = &input[image_dim[0]*pixel_y + x_pixel]; - // change value for the median, only if we don't intend to use the - // conditional or if the value of the pixel is one of the extrema - // of the pixel value + // get end of the windows. This is needed since in shrink mode we are + // not sure to fill the entire window. + typename std::vector<const T*>::iterator window_end; + int window_size = kernel_dim[0]*kernel_dim[1]; + if(mode == SHRINK){ + int x_shrink_ker_dim = std::min(x_pixel+halfKernel_x, image_dim[1]-1) - std::max(0, x_pixel-halfKernel_x)+1; + int y_shrink_ker_dim = std::min(y_pixel+halfKernel_y, image_dim[0]-1) - std::max(0, y_pixel-halfKernel_y)+1; + window_size = x_shrink_ker_dim*y_shrink_ker_dim; + window_end = window_values.begin() + window_size; + }else{ + window_end = window_values.end(); + } + + // apply the median value if needed for this pixel + const T* currentPixelValue = &input[image_dim[1]*y_pixel + x_pixel]; if (conditional == true){ T min = 0; T max = 0; - getMinMax(window_values, min, max); - // In conditional point we are only setting the value to the pixel - // if the value is the min or max and unique + getMinMax(window_values, min, max, window_end); if ((*currentPixelValue == max) || (*currentPixelValue == min)){ - output[image_dim[0]*pixel_y + x_pixel] = *(median<T>(window_values)); + output[image_dim[1]*y_pixel + x_pixel] = *(median<T>(window_values, window_size)); }else{ - output[image_dim[0]*pixel_y + x_pixel] = *currentPixelValue; + output[image_dim[1]*y_pixel + x_pixel] = *currentPixelValue; } }else{ - output[image_dim[0]*pixel_y + x_pixel] = *(median<T>(window_values)); + output[image_dim[1]*y_pixel + x_pixel] = *(median<T>(window_values, window_size)); } } } diff --git a/silx/math/medianfilter/median_filter.pxd b/silx/math/medianfilter/median_filter.pxd index b9d3fd2..8460684 100644 --- a/silx/math/medianfilter/median_filter.pxd +++ b/silx/math/medianfilter/median_filter.pxd @@ -36,3 +36,6 @@ cdef extern from "median_filter.hpp": int y_pixel_range_min, int y_pixel_range_max, bool conditional) nogil; + + cdef extern int reflect(int index, int length_max); + cdef extern int mirror(int index, int length_max); diff --git a/silx/math/medianfilter/medianfilter.cpp b/silx/math/medianfilter/medianfilter.cpp index 7ea2899..0a4f137 100644 --- a/silx/math/medianfilter/medianfilter.cpp +++ b/silx/math/medianfilter/medianfilter.cpp @@ -1,28 +1,40 @@ -/* Generated by Cython 0.21.1 */ +/* Generated by Cython 0.25.2 */ + +/* BEGIN: Cython Metadata +{ + "distutils": { + "depends": [ + "/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h", + "/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ufuncobject.h", + "silx/math/medianfilter/include/median_filter.hpp" + ], + "extra_compile_args": [ + "-fopenmp" + ], + "extra_link_args": [ + "-fopenmp" + ], + "include_dirs": [ + "silx/math/medianfilter/include", + "/usr/lib/python2.7/dist-packages/numpy/core/include" + ], + "language": "c++" + }, + "module_name": "silx.math.medianfilter.medianfilter" +} +END: Cython Metadata */ #define PY_SSIZE_T_CLEAN -#ifndef CYTHON_USE_PYLONG_INTERNALS -#ifdef PYLONG_BITS_IN_DIGIT -#define CYTHON_USE_PYLONG_INTERNALS 0 -#else -#include "pyconfig.h" -#ifdef PYLONG_BITS_IN_DIGIT -#define CYTHON_USE_PYLONG_INTERNALS 1 -#else -#define CYTHON_USE_PYLONG_INTERNALS 0 -#endif -#endif -#endif #include "Python.h" #ifndef Py_PYTHON_H #error Python headers needed to compile C extensions, please install development version of Python. #elif PY_VERSION_HEX < 0x02060000 || (0x03000000 <= PY_VERSION_HEX && PY_VERSION_HEX < 0x03020000) #error Cython requires Python 2.6+ or Python 3.2+. #else -#define CYTHON_ABI "0_21_1" +#define CYTHON_ABI "0_25_2" #include <stddef.h> #ifndef offsetof -#define offsetof(type, member) ( (size_t) & ((type*)0) -> member ) + #define offsetof(type, member) ( (size_t) & ((type*)0) -> member ) #endif #if !defined(WIN32) && !defined(MS_WINDOWS) #ifndef __stdcall @@ -41,6 +53,11 @@ #ifndef DL_EXPORT #define DL_EXPORT(t) t #endif +#ifndef HAVE_LONG_LONG + #if PY_VERSION_HEX >= 0x03030000 || (PY_MAJOR_VERSION == 2 && PY_VERSION_HEX >= 0x02070000) + #define HAVE_LONG_LONG + #endif +#endif #ifndef PY_LONG_LONG #define PY_LONG_LONG LONG_LONG #endif @@ -48,63 +65,214 @@ #define Py_HUGE_VAL HUGE_VAL #endif #ifdef PYPY_VERSION -#define CYTHON_COMPILING_IN_PYPY 1 -#define CYTHON_COMPILING_IN_CPYTHON 0 + #define CYTHON_COMPILING_IN_PYPY 1 + #define CYTHON_COMPILING_IN_PYSTON 0 + #define CYTHON_COMPILING_IN_CPYTHON 0 + #undef CYTHON_USE_TYPE_SLOTS + #define CYTHON_USE_TYPE_SLOTS 0 + #undef CYTHON_USE_ASYNC_SLOTS + #define CYTHON_USE_ASYNC_SLOTS 0 + #undef CYTHON_USE_PYLIST_INTERNALS + #define CYTHON_USE_PYLIST_INTERNALS 0 + #undef CYTHON_USE_UNICODE_INTERNALS + #define CYTHON_USE_UNICODE_INTERNALS 0 + #undef CYTHON_USE_UNICODE_WRITER + #define CYTHON_USE_UNICODE_WRITER 0 + #undef CYTHON_USE_PYLONG_INTERNALS + #define CYTHON_USE_PYLONG_INTERNALS 0 + #undef CYTHON_AVOID_BORROWED_REFS + #define CYTHON_AVOID_BORROWED_REFS 1 + #undef CYTHON_ASSUME_SAFE_MACROS + #define CYTHON_ASSUME_SAFE_MACROS 0 + #undef CYTHON_UNPACK_METHODS + #define CYTHON_UNPACK_METHODS 0 + #undef CYTHON_FAST_THREAD_STATE + #define CYTHON_FAST_THREAD_STATE 0 + #undef CYTHON_FAST_PYCALL + #define CYTHON_FAST_PYCALL 0 +#elif defined(PYSTON_VERSION) + #define CYTHON_COMPILING_IN_PYPY 0 + #define CYTHON_COMPILING_IN_PYSTON 1 + #define CYTHON_COMPILING_IN_CPYTHON 0 + #ifndef CYTHON_USE_TYPE_SLOTS + #define CYTHON_USE_TYPE_SLOTS 1 + #endif + #undef CYTHON_USE_ASYNC_SLOTS + #define CYTHON_USE_ASYNC_SLOTS 0 + #undef CYTHON_USE_PYLIST_INTERNALS + #define CYTHON_USE_PYLIST_INTERNALS 0 + #ifndef CYTHON_USE_UNICODE_INTERNALS + #define CYTHON_USE_UNICODE_INTERNALS 1 + #endif + #undef CYTHON_USE_UNICODE_WRITER + #define CYTHON_USE_UNICODE_WRITER 0 + #undef CYTHON_USE_PYLONG_INTERNALS + #define CYTHON_USE_PYLONG_INTERNALS 0 + #ifndef CYTHON_AVOID_BORROWED_REFS + #define CYTHON_AVOID_BORROWED_REFS 0 + #endif + #ifndef CYTHON_ASSUME_SAFE_MACROS + #define CYTHON_ASSUME_SAFE_MACROS 1 + #endif + #ifndef CYTHON_UNPACK_METHODS + #define CYTHON_UNPACK_METHODS 1 + #endif + #undef CYTHON_FAST_THREAD_STATE + #define CYTHON_FAST_THREAD_STATE 0 + #undef CYTHON_FAST_PYCALL + #define CYTHON_FAST_PYCALL 0 #else -#define CYTHON_COMPILING_IN_PYPY 0 -#define CYTHON_COMPILING_IN_CPYTHON 1 + #define CYTHON_COMPILING_IN_PYPY 0 + #define CYTHON_COMPILING_IN_PYSTON 0 + #define CYTHON_COMPILING_IN_CPYTHON 1 + #ifndef CYTHON_USE_TYPE_SLOTS + #define CYTHON_USE_TYPE_SLOTS 1 + #endif + #if PY_MAJOR_VERSION < 3 + #undef CYTHON_USE_ASYNC_SLOTS + #define CYTHON_USE_ASYNC_SLOTS 0 + #elif !defined(CYTHON_USE_ASYNC_SLOTS) + #define CYTHON_USE_ASYNC_SLOTS 1 + #endif + #if PY_VERSION_HEX < 0x02070000 + #undef CYTHON_USE_PYLONG_INTERNALS + #define CYTHON_USE_PYLONG_INTERNALS 0 + #elif !defined(CYTHON_USE_PYLONG_INTERNALS) + #define CYTHON_USE_PYLONG_INTERNALS 1 + #endif + #ifndef CYTHON_USE_PYLIST_INTERNALS + #define CYTHON_USE_PYLIST_INTERNALS 1 + #endif + #ifndef CYTHON_USE_UNICODE_INTERNALS + #define CYTHON_USE_UNICODE_INTERNALS 1 + #endif + #if PY_VERSION_HEX < 0x030300F0 + #undef CYTHON_USE_UNICODE_WRITER + #define CYTHON_USE_UNICODE_WRITER 0 + #elif !defined(CYTHON_USE_UNICODE_WRITER) + #define CYTHON_USE_UNICODE_WRITER 1 + #endif + #ifndef CYTHON_AVOID_BORROWED_REFS + #define CYTHON_AVOID_BORROWED_REFS 0 + #endif + #ifndef CYTHON_ASSUME_SAFE_MACROS + #define CYTHON_ASSUME_SAFE_MACROS 1 + #endif + #ifndef CYTHON_UNPACK_METHODS + #define CYTHON_UNPACK_METHODS 1 + #endif + #ifndef CYTHON_FAST_THREAD_STATE + #define CYTHON_FAST_THREAD_STATE 1 + #endif + #ifndef CYTHON_FAST_PYCALL + #define CYTHON_FAST_PYCALL 1 + #endif +#endif +#if !defined(CYTHON_FAST_PYCCALL) +#define CYTHON_FAST_PYCCALL (CYTHON_FAST_PYCALL && PY_VERSION_HEX >= 0x030600B1) +#endif +#if CYTHON_USE_PYLONG_INTERNALS + #include "longintrepr.h" + #undef SHIFT + #undef BASE + #undef MASK #endif -#if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX < 0x02070600 -#define Py_OptimizeFlag 0 +#if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX < 0x02070600 && !defined(Py_OptimizeFlag) + #define Py_OptimizeFlag 0 #endif #define __PYX_BUILD_PY_SSIZE_T "n" #define CYTHON_FORMAT_SSIZE_T "z" #if PY_MAJOR_VERSION < 3 #define __Pyx_BUILTIN_MODULE_NAME "__builtin__" - #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \ + #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)\ PyCode_New(a+k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) #define __Pyx_DefaultClassType PyClass_Type #else #define __Pyx_BUILTIN_MODULE_NAME "builtins" - #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \ + #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)\ PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) #define __Pyx_DefaultClassType PyType_Type #endif -#if PY_MAJOR_VERSION >= 3 +#ifndef Py_TPFLAGS_CHECKTYPES #define Py_TPFLAGS_CHECKTYPES 0 +#endif +#ifndef Py_TPFLAGS_HAVE_INDEX #define Py_TPFLAGS_HAVE_INDEX 0 +#endif +#ifndef Py_TPFLAGS_HAVE_NEWBUFFER #define Py_TPFLAGS_HAVE_NEWBUFFER 0 #endif -#if PY_VERSION_HEX < 0x030400a1 && !defined(Py_TPFLAGS_HAVE_FINALIZE) +#ifndef Py_TPFLAGS_HAVE_FINALIZE #define Py_TPFLAGS_HAVE_FINALIZE 0 #endif +#ifndef METH_FASTCALL + #define METH_FASTCALL 0x80 + typedef PyObject *(*__Pyx_PyCFunctionFast) (PyObject *self, PyObject **args, + Py_ssize_t nargs, PyObject *kwnames); +#else + #define __Pyx_PyCFunctionFast _PyCFunctionFast +#endif +#if CYTHON_FAST_PYCCALL +#define __Pyx_PyFastCFunction_Check(func)\ + ((PyCFunction_Check(func) && (METH_FASTCALL == (PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))))) +#else +#define __Pyx_PyFastCFunction_Check(func) 0 +#endif #if PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND) #define CYTHON_PEP393_ENABLED 1 - #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ? \ + #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ?\ 0 : _PyUnicode_Ready((PyObject *)(op))) #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u) #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i) + #define __Pyx_PyUnicode_MAX_CHAR_VALUE(u) PyUnicode_MAX_CHAR_VALUE(u) #define __Pyx_PyUnicode_KIND(u) PyUnicode_KIND(u) #define __Pyx_PyUnicode_DATA(u) PyUnicode_DATA(u) #define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i) + #define __Pyx_PyUnicode_WRITE(k, d, i, ch) PyUnicode_WRITE(k, d, i, ch) + #define __Pyx_PyUnicode_IS_TRUE(u) (0 != (likely(PyUnicode_IS_READY(u)) ? PyUnicode_GET_LENGTH(u) : PyUnicode_GET_SIZE(u))) #else #define CYTHON_PEP393_ENABLED 0 + #define PyUnicode_1BYTE_KIND 1 + #define PyUnicode_2BYTE_KIND 2 + #define PyUnicode_4BYTE_KIND 4 #define __Pyx_PyUnicode_READY(op) (0) #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_SIZE(u) #define __Pyx_PyUnicode_READ_CHAR(u, i) ((Py_UCS4)(PyUnicode_AS_UNICODE(u)[i])) + #define __Pyx_PyUnicode_MAX_CHAR_VALUE(u) ((sizeof(Py_UNICODE) == 2) ? 65535 : 1114111) #define __Pyx_PyUnicode_KIND(u) (sizeof(Py_UNICODE)) #define __Pyx_PyUnicode_DATA(u) ((void*)PyUnicode_AS_UNICODE(u)) #define __Pyx_PyUnicode_READ(k, d, i) ((void)(k), (Py_UCS4)(((Py_UNICODE*)d)[i])) + #define __Pyx_PyUnicode_WRITE(k, d, i, ch) (((void)(k)), ((Py_UNICODE*)d)[i] = ch) + #define __Pyx_PyUnicode_IS_TRUE(u) (0 != PyUnicode_GET_SIZE(u)) #endif #if CYTHON_COMPILING_IN_PYPY #define __Pyx_PyUnicode_Concat(a, b) PyNumber_Add(a, b) #define __Pyx_PyUnicode_ConcatSafe(a, b) PyNumber_Add(a, b) - #define __Pyx_PyFrozenSet_Size(s) PyObject_Size(s) #else #define __Pyx_PyUnicode_Concat(a, b) PyUnicode_Concat(a, b) - #define __Pyx_PyUnicode_ConcatSafe(a, b) ((unlikely((a) == Py_None) || unlikely((b) == Py_None)) ? \ + #define __Pyx_PyUnicode_ConcatSafe(a, b) ((unlikely((a) == Py_None) || unlikely((b) == Py_None)) ?\ PyNumber_Add(a, b) : __Pyx_PyUnicode_Concat(a, b)) - #define __Pyx_PyFrozenSet_Size(s) PySet_Size(s) +#endif +#if CYTHON_COMPILING_IN_PYPY && !defined(PyUnicode_Contains) + #define PyUnicode_Contains(u, s) PySequence_Contains(u, s) +#endif +#if CYTHON_COMPILING_IN_PYPY && !defined(PyByteArray_Check) + #define PyByteArray_Check(obj) PyObject_TypeCheck(obj, &PyByteArray_Type) +#endif +#if CYTHON_COMPILING_IN_PYPY && !defined(PyObject_Format) + #define PyObject_Format(obj, fmt) PyObject_CallMethod(obj, "__format__", "O", fmt) +#endif +#if CYTHON_COMPILING_IN_PYPY && !defined(PyObject_Malloc) + #define PyObject_Malloc(s) PyMem_Malloc(s) + #define PyObject_Free(p) PyMem_Free(p) + #define PyObject_Realloc(p) PyMem_Realloc(p) +#endif +#if CYTHON_COMPILING_IN_PYSTON + #define __Pyx_PyCode_HasFreeVars(co) PyCode_HasFreeVars(co) + #define __Pyx_PyFrame_SetLineNumber(frame, lineno) PyFrame_SetLineNumber(frame, lineno) +#else + #define __Pyx_PyCode_HasFreeVars(co) (PyCode_GetNumFree(co) > 0) + #define __Pyx_PyFrame_SetLineNumber(frame, lineno) (frame)->f_lineno = (lineno) #endif #define __Pyx_PyString_FormatSafe(a, b) ((unlikely((a) == Py_None)) ? PyNumber_Remainder(a, b) : __Pyx_PyString_Format(a, b)) #define __Pyx_PyUnicode_FormatSafe(a, b) ((unlikely((a) == Py_None)) ? PyNumber_Remainder(a, b) : PyUnicode_Format(a, b)) @@ -113,6 +281,9 @@ #else #define __Pyx_PyString_Format(a, b) PyString_Format(a, b) #endif +#if PY_MAJOR_VERSION < 3 && !defined(PyObject_ASCII) + #define PyObject_ASCII(o) PyObject_Repr(o) +#endif #if PY_MAJOR_VERSION >= 3 #define PyBaseString_Type PyUnicode_Type #define PyStringObject PyUnicodeObject @@ -131,6 +302,7 @@ #define PySet_CheckExact(obj) (Py_TYPE(obj) == &PySet_Type) #endif #define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type) +#define __Pyx_PyException_Check(obj) __Pyx_TypeCheck(obj, PyExc_Exception) #if PY_MAJOR_VERSION >= 3 #define PyIntObject PyLongObject #define PyInt_Type PyLong_Type @@ -169,16 +341,20 @@ #else #define __Pyx_PyMethod_New(func, self, klass) PyMethod_New(func, self, klass) #endif -#ifndef CYTHON_INLINE - #if defined(__GNUC__) - #define CYTHON_INLINE __inline__ - #elif defined(_MSC_VER) - #define CYTHON_INLINE __inline - #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L - #define CYTHON_INLINE inline +#if CYTHON_USE_ASYNC_SLOTS + #if PY_VERSION_HEX >= 0x030500B1 + #define __Pyx_PyAsyncMethodsStruct PyAsyncMethods + #define __Pyx_PyType_AsAsync(obj) (Py_TYPE(obj)->tp_as_async) #else - #define CYTHON_INLINE + typedef struct { + unaryfunc am_await; + unaryfunc am_aiter; + unaryfunc am_anext; + } __Pyx_PyAsyncMethodsStruct; + #define __Pyx_PyType_AsAsync(obj) ((__Pyx_PyAsyncMethodsStruct*) (Py_TYPE(obj)->tp_reserved)) #endif +#else + #define __Pyx_PyType_AsAsync(obj) NULL #endif #ifndef CYTHON_RESTRICT #if defined(__GNUC__) @@ -191,26 +367,88 @@ #define CYTHON_RESTRICT #endif #endif +#ifndef CYTHON_UNUSED +# if defined(__GNUC__) +# if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4)) +# define CYTHON_UNUSED __attribute__ ((__unused__)) +# else +# define CYTHON_UNUSED +# endif +# elif defined(__ICC) || (defined(__INTEL_COMPILER) && !defined(_MSC_VER)) +# define CYTHON_UNUSED __attribute__ ((__unused__)) +# else +# define CYTHON_UNUSED +# endif +#endif +#ifndef CYTHON_MAYBE_UNUSED_VAR +# if defined(__cplusplus) + template<class T> void CYTHON_MAYBE_UNUSED_VAR( const T& ) { } +# else +# define CYTHON_MAYBE_UNUSED_VAR(x) (void)(x) +# endif +#endif +#ifndef CYTHON_NCP_UNUSED +# if CYTHON_COMPILING_IN_CPYTHON +# define CYTHON_NCP_UNUSED +# else +# define CYTHON_NCP_UNUSED CYTHON_UNUSED +# endif +#endif +#define __Pyx_void_to_None(void_result) ((void)(void_result), Py_INCREF(Py_None), Py_None) + +#ifndef __cplusplus + #error "Cython files generated with the C++ option must be compiled with a C++ compiler." +#endif +#ifndef CYTHON_INLINE + #if defined(__clang__) + #define CYTHON_INLINE __inline__ __attribute__ ((__unused__)) + #else + #define CYTHON_INLINE inline + #endif +#endif +template<typename T> +void __Pyx_call_destructor(T& x) { + x.~T(); +} +template<typename T> +class __Pyx_FakeReference { + public: + __Pyx_FakeReference() : ptr(NULL) { } + __Pyx_FakeReference(const T& ref) : ptr(const_cast<T*>(&ref)) { } + T *operator->() { return ptr; } + T *operator&() { return ptr; } + operator T&() { return *ptr; } + template<typename U> bool operator ==(U other) { return *ptr == other; } + template<typename U> bool operator !=(U other) { return *ptr != other; } + private: + T *ptr; +}; + +#if defined(WIN32) || defined(MS_WINDOWS) + #define _USE_MATH_DEFINES +#endif +#include <math.h> #ifdef NAN #define __PYX_NAN() ((float) NAN) #else static CYTHON_INLINE float __PYX_NAN() { - /* Initialize NaN. The sign is irrelevant, an exponent with all bits 1 and - a nonzero mantissa means NaN. If the first bit in the mantissa is 1, it is - a quiet NaN. */ float value; memset(&value, 0xFF, sizeof(value)); return value; } #endif -#ifdef __cplusplus -template<typename T> -void __Pyx_call_destructor(T* x) { - x->~T(); -} +#if defined(__CYGWIN__) && defined(_LDBL_EQ_DBL) +#define __Pyx_truncl trunc +#else +#define __Pyx_truncl truncl #endif +#define __PYX_ERR(f_index, lineno, Ln_error) \ +{ \ + __pyx_filename = __pyx_f[f_index]; __pyx_lineno = lineno; __pyx_clineno = __LINE__; goto Ln_error; \ +} + #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y) #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y) @@ -227,16 +465,12 @@ void __Pyx_call_destructor(T* x) { #endif #endif -#if defined(WIN32) || defined(MS_WINDOWS) -#define _USE_MATH_DEFINES -#endif -#include <math.h> #define __PYX_HAVE__silx__math__medianfilter__medianfilter #define __PYX_HAVE_API__silx__math__medianfilter__medianfilter #include "median_filter.hpp" -#include "string.h" -#include "stdio.h" -#include "stdlib.h" +#include <string.h> +#include <stdio.h> +#include <stdlib.h> #include "numpy/arrayobject.h" #include "numpy/ufuncobject.h" #include "pythread.h" @@ -249,20 +483,7 @@ void __Pyx_call_destructor(T* x) { #define CYTHON_WITHOUT_ASSERTIONS #endif -#ifndef CYTHON_UNUSED -# if defined(__GNUC__) -# if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4)) -# define CYTHON_UNUSED __attribute__ ((__unused__)) -# else -# define CYTHON_UNUSED -# endif -# elif defined(__ICC) || (defined(__INTEL_COMPILER) && !defined(_MSC_VER)) -# define CYTHON_UNUSED __attribute__ ((__unused__)) -# else -# define CYTHON_UNUSED -# endif -#endif -typedef struct {PyObject **p; char *s; const Py_ssize_t n; const char* encoding; +typedef struct {PyObject **p; const char *s; const Py_ssize_t n; const char* encoding; const char is_unicode; const char is_str; const char intern; } __Pyx_StringTabEntry; #define __PYX_DEFAULT_STRING_ENCODING_IS_ASCII 0 @@ -270,16 +491,34 @@ typedef struct {PyObject **p; char *s; const Py_ssize_t n; const char* encoding; #define __PYX_DEFAULT_STRING_ENCODING "" #define __Pyx_PyObject_FromString __Pyx_PyBytes_FromString #define __Pyx_PyObject_FromStringAndSize __Pyx_PyBytes_FromStringAndSize -#define __Pyx_fits_Py_ssize_t(v, type, is_signed) ( \ - (sizeof(type) < sizeof(Py_ssize_t)) || \ - (sizeof(type) > sizeof(Py_ssize_t) && \ - likely(v < (type)PY_SSIZE_T_MAX || \ - v == (type)PY_SSIZE_T_MAX) && \ - (!is_signed || likely(v > (type)PY_SSIZE_T_MIN || \ - v == (type)PY_SSIZE_T_MIN))) || \ - (sizeof(type) == sizeof(Py_ssize_t) && \ - (is_signed || likely(v < (type)PY_SSIZE_T_MAX || \ +#define __Pyx_uchar_cast(c) ((unsigned char)c) +#define __Pyx_long_cast(x) ((long)x) +#define __Pyx_fits_Py_ssize_t(v, type, is_signed) (\ + (sizeof(type) < sizeof(Py_ssize_t)) ||\ + (sizeof(type) > sizeof(Py_ssize_t) &&\ + likely(v < (type)PY_SSIZE_T_MAX ||\ + v == (type)PY_SSIZE_T_MAX) &&\ + (!is_signed || likely(v > (type)PY_SSIZE_T_MIN ||\ + v == (type)PY_SSIZE_T_MIN))) ||\ + (sizeof(type) == sizeof(Py_ssize_t) &&\ + (is_signed || likely(v < (type)PY_SSIZE_T_MAX ||\ v == (type)PY_SSIZE_T_MAX))) ) +#if defined (__cplusplus) && __cplusplus >= 201103L + #include <cstdlib> + #define __Pyx_sst_abs(value) std::abs(value) +#elif SIZEOF_INT >= SIZEOF_SIZE_T + #define __Pyx_sst_abs(value) abs(value) +#elif SIZEOF_LONG >= SIZEOF_SIZE_T + #define __Pyx_sst_abs(value) labs(value) +#elif defined (_MSC_VER) && defined (_M_X64) + #define __Pyx_sst_abs(value) _abs64(value) +#elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L + #define __Pyx_sst_abs(value) llabs(value) +#elif defined (__GNUC__) + #define __Pyx_sst_abs(value) __builtin_llabs(value) +#else + #define __Pyx_sst_abs(value) ((value<0) ? -value : value) +#endif static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject*); static CYTHON_INLINE char* __Pyx_PyObject_AsStringAndSize(PyObject*, Py_ssize_t* length); #define __Pyx_PyByteArray_FromString(s) PyByteArray_FromStringAndSize((const char*)s, strlen((const char*)s)) @@ -296,11 +535,11 @@ static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char*); #endif #define __Pyx_PyObject_AsSString(s) ((signed char*) __Pyx_PyObject_AsString(s)) #define __Pyx_PyObject_AsUString(s) ((unsigned char*) __Pyx_PyObject_AsString(s)) -#define __Pyx_PyObject_FromUString(s) __Pyx_PyObject_FromString((const char*)s) -#define __Pyx_PyBytes_FromUString(s) __Pyx_PyBytes_FromString((const char*)s) -#define __Pyx_PyByteArray_FromUString(s) __Pyx_PyByteArray_FromString((const char*)s) -#define __Pyx_PyStr_FromUString(s) __Pyx_PyStr_FromString((const char*)s) -#define __Pyx_PyUnicode_FromUString(s) __Pyx_PyUnicode_FromString((const char*)s) +#define __Pyx_PyObject_FromCString(s) __Pyx_PyObject_FromString((const char*)s) +#define __Pyx_PyBytes_FromCString(s) __Pyx_PyBytes_FromString((const char*)s) +#define __Pyx_PyByteArray_FromCString(s) __Pyx_PyByteArray_FromString((const char*)s) +#define __Pyx_PyStr_FromCString(s) __Pyx_PyStr_FromString((const char*)s) +#define __Pyx_PyUnicode_FromCString(s) __Pyx_PyUnicode_FromString((const char*)s) #if PY_MAJOR_VERSION < 3 static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) { @@ -314,18 +553,25 @@ static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) #define __Pyx_PyUnicode_FromUnicode(u) PyUnicode_FromUnicode(u, __Pyx_Py_UNICODE_strlen(u)) #define __Pyx_PyUnicode_FromUnicodeAndLength PyUnicode_FromUnicode #define __Pyx_PyUnicode_AsUnicode PyUnicode_AsUnicode -#define __Pyx_Owned_Py_None(b) (Py_INCREF(Py_None), Py_None) -#define __Pyx_PyBool_FromLong(b) ((b) ? (Py_INCREF(Py_True), Py_True) : (Py_INCREF(Py_False), Py_False)) +#define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) +#define __Pyx_Owned_Py_None(b) __Pyx_NewRef(Py_None) +#define __Pyx_PyBool_FromLong(b) ((b) ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False)) static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject*); -static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x); +static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x); static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject*); static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t); -#if CYTHON_COMPILING_IN_CPYTHON +#if CYTHON_ASSUME_SAFE_MACROS #define __pyx_PyFloat_AsDouble(x) (PyFloat_CheckExact(x) ? PyFloat_AS_DOUBLE(x) : PyFloat_AsDouble(x)) #else #define __pyx_PyFloat_AsDouble(x) PyFloat_AsDouble(x) #endif #define __pyx_PyFloat_AsFloat(x) ((float) __pyx_PyFloat_AsDouble(x)) +#if PY_MAJOR_VERSION >= 3 +#define __Pyx_PyNumber_Int(x) (PyLong_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Long(x)) +#else +#define __Pyx_PyNumber_Int(x) (PyInt_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Int(x)) +#endif +#define __Pyx_PyNumber_Float(x) (PyFloat_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Float(x)) #if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII static int __Pyx_sys_getdefaultencoding_not_ascii; static int __Pyx_init_sys_getdefaultencoding_params(void) { @@ -336,7 +582,7 @@ static int __Pyx_init_sys_getdefaultencoding_params(void) { const char* default_encoding_c; sys = PyImport_ImportModule("sys"); if (!sys) goto bad; - default_encoding = PyObject_CallMethod(sys, (char*) (const char*) "getdefaultencoding", NULL); + default_encoding = PyObject_CallMethod(sys, (char*) "getdefaultencoding", NULL); Py_DECREF(sys); if (!default_encoding) goto bad; default_encoding_c = PyBytes_AsString(default_encoding); @@ -416,11 +662,13 @@ static PyObject *__pyx_d; static PyObject *__pyx_b; static PyObject *__pyx_empty_tuple; static PyObject *__pyx_empty_bytes; +static PyObject *__pyx_empty_unicode; static int __pyx_lineno; static int __pyx_clineno = 0; static const char * __pyx_cfilenm= __FILE__; static const char *__pyx_filename; +/* Header.proto */ #if !defined(CYTHON_CCOMPLEX) #if defined(__cplusplus) #define CYTHON_CCOMPLEX 1 @@ -449,6 +697,7 @@ static const char *__pyx_f[] = { "stringsource", "type.pxd", }; +/* MemviewSliceStruct.proto */ struct __pyx_memoryview_obj; typedef struct { struct __pyx_memoryview_obj *memview; @@ -458,6 +707,7 @@ typedef struct { Py_ssize_t suboffsets[8]; } __Pyx_memviewslice; +/* BufferFormatStructs.proto */ #define IS_UNSIGNED(type) (((type) -1) > 0) struct __Pyx_StructField_; #define __PYX_BUF_FLAGS_PACKED_STRUCT (1 << 0) @@ -493,26 +743,28 @@ typedef struct { char is_valid_array; } __Pyx_BufFmt_Context; +/* Atomics.proto */ #include <pythread.h> #ifndef CYTHON_ATOMICS #define CYTHON_ATOMICS 1 #endif #define __pyx_atomic_int_type int -#if CYTHON_ATOMICS && __GNUC__ >= 4 && (__GNUC_MINOR__ > 1 || \ - (__GNUC_MINOR__ == 1 && __GNUC_PATCHLEVEL >= 2)) && \ +#if CYTHON_ATOMICS && __GNUC__ >= 4 && (__GNUC_MINOR__ > 1 ||\ + (__GNUC_MINOR__ == 1 && __GNUC_PATCHLEVEL >= 2)) &&\ !defined(__i386__) #define __pyx_atomic_incr_aligned(value, lock) __sync_fetch_and_add(value, 1) #define __pyx_atomic_decr_aligned(value, lock) __sync_fetch_and_sub(value, 1) #ifdef __PYX_DEBUG_ATOMICS #warning "Using GNU atomics" #endif -#elif CYTHON_ATOMICS && MSC_VER +#elif CYTHON_ATOMICS && defined(_MSC_VER) && 0 #include <Windows.h> + #undef __pyx_atomic_int_type #define __pyx_atomic_int_type LONG #define __pyx_atomic_incr_aligned(value, lock) InterlockedIncrement(value) #define __pyx_atomic_decr_aligned(value, lock) InterlockedDecrement(value) #ifdef __PYX_DEBUG_ATOMICS - #warning "Using MSVC atomics" + #pragma message ("Using MSVC atomics") #endif #elif CYTHON_ATOMICS && (defined(__ICC) || defined(__INTEL_COMPILER)) && 0 #define __pyx_atomic_incr_aligned(value, lock) _InterlockedIncrement(value) @@ -529,19 +781,19 @@ typedef struct { #endif typedef volatile __pyx_atomic_int_type __pyx_atomic_int; #if CYTHON_ATOMICS - #define __pyx_add_acquisition_count(memview) \ + #define __pyx_add_acquisition_count(memview)\ __pyx_atomic_incr_aligned(__pyx_get_slice_count_pointer(memview), memview->lock) - #define __pyx_sub_acquisition_count(memview) \ + #define __pyx_sub_acquisition_count(memview)\ __pyx_atomic_decr_aligned(__pyx_get_slice_count_pointer(memview), memview->lock) #else - #define __pyx_add_acquisition_count(memview) \ + #define __pyx_add_acquisition_count(memview)\ __pyx_add_acquisition_count_locked(__pyx_get_slice_count_pointer(memview), memview->lock) - #define __pyx_sub_acquisition_count(memview) \ + #define __pyx_sub_acquisition_count(memview)\ __pyx_sub_acquisition_count_locked(__pyx_get_slice_count_pointer(memview), memview->lock) #endif -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":723 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":725 * # in Cython to enable them only on the right systems. * * ctypedef npy_int8 int8_t # <<<<<<<<<<<<<< @@ -550,7 +802,7 @@ typedef volatile __pyx_atomic_int_type __pyx_atomic_int; */ typedef npy_int8 __pyx_t_5numpy_int8_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":724 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":726 * * ctypedef npy_int8 int8_t * ctypedef npy_int16 int16_t # <<<<<<<<<<<<<< @@ -559,7 +811,7 @@ typedef npy_int8 __pyx_t_5numpy_int8_t; */ typedef npy_int16 __pyx_t_5numpy_int16_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":725 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":727 * ctypedef npy_int8 int8_t * ctypedef npy_int16 int16_t * ctypedef npy_int32 int32_t # <<<<<<<<<<<<<< @@ -568,7 +820,7 @@ typedef npy_int16 __pyx_t_5numpy_int16_t; */ typedef npy_int32 __pyx_t_5numpy_int32_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":726 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":728 * ctypedef npy_int16 int16_t * ctypedef npy_int32 int32_t * ctypedef npy_int64 int64_t # <<<<<<<<<<<<<< @@ -577,7 +829,7 @@ typedef npy_int32 __pyx_t_5numpy_int32_t; */ typedef npy_int64 __pyx_t_5numpy_int64_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":730 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":732 * #ctypedef npy_int128 int128_t * * ctypedef npy_uint8 uint8_t # <<<<<<<<<<<<<< @@ -586,7 +838,7 @@ typedef npy_int64 __pyx_t_5numpy_int64_t; */ typedef npy_uint8 __pyx_t_5numpy_uint8_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":731 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":733 * * ctypedef npy_uint8 uint8_t * ctypedef npy_uint16 uint16_t # <<<<<<<<<<<<<< @@ -595,7 +847,7 @@ typedef npy_uint8 __pyx_t_5numpy_uint8_t; */ typedef npy_uint16 __pyx_t_5numpy_uint16_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":732 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":734 * ctypedef npy_uint8 uint8_t * ctypedef npy_uint16 uint16_t * ctypedef npy_uint32 uint32_t # <<<<<<<<<<<<<< @@ -604,7 +856,7 @@ typedef npy_uint16 __pyx_t_5numpy_uint16_t; */ typedef npy_uint32 __pyx_t_5numpy_uint32_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":733 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":735 * ctypedef npy_uint16 uint16_t * ctypedef npy_uint32 uint32_t * ctypedef npy_uint64 uint64_t # <<<<<<<<<<<<<< @@ -613,7 +865,7 @@ typedef npy_uint32 __pyx_t_5numpy_uint32_t; */ typedef npy_uint64 __pyx_t_5numpy_uint64_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":737 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":739 * #ctypedef npy_uint128 uint128_t * * ctypedef npy_float32 float32_t # <<<<<<<<<<<<<< @@ -622,7 +874,7 @@ typedef npy_uint64 __pyx_t_5numpy_uint64_t; */ typedef npy_float32 __pyx_t_5numpy_float32_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":738 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":740 * * ctypedef npy_float32 float32_t * ctypedef npy_float64 float64_t # <<<<<<<<<<<<<< @@ -631,7 +883,7 @@ typedef npy_float32 __pyx_t_5numpy_float32_t; */ typedef npy_float64 __pyx_t_5numpy_float64_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":747 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":749 * # The int types are mapped a bit surprising -- * # numpy.int corresponds to 'l' and numpy.long to 'q' * ctypedef npy_long int_t # <<<<<<<<<<<<<< @@ -640,7 +892,7 @@ typedef npy_float64 __pyx_t_5numpy_float64_t; */ typedef npy_long __pyx_t_5numpy_int_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":748 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":750 * # numpy.int corresponds to 'l' and numpy.long to 'q' * ctypedef npy_long int_t * ctypedef npy_longlong long_t # <<<<<<<<<<<<<< @@ -649,7 +901,7 @@ typedef npy_long __pyx_t_5numpy_int_t; */ typedef npy_longlong __pyx_t_5numpy_long_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":749 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":751 * ctypedef npy_long int_t * ctypedef npy_longlong long_t * ctypedef npy_longlong longlong_t # <<<<<<<<<<<<<< @@ -658,7 +910,7 @@ typedef npy_longlong __pyx_t_5numpy_long_t; */ typedef npy_longlong __pyx_t_5numpy_longlong_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":751 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":753 * ctypedef npy_longlong longlong_t * * ctypedef npy_ulong uint_t # <<<<<<<<<<<<<< @@ -667,7 +919,7 @@ typedef npy_longlong __pyx_t_5numpy_longlong_t; */ typedef npy_ulong __pyx_t_5numpy_uint_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":752 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":754 * * ctypedef npy_ulong uint_t * ctypedef npy_ulonglong ulong_t # <<<<<<<<<<<<<< @@ -676,7 +928,7 @@ typedef npy_ulong __pyx_t_5numpy_uint_t; */ typedef npy_ulonglong __pyx_t_5numpy_ulong_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":753 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":755 * ctypedef npy_ulong uint_t * ctypedef npy_ulonglong ulong_t * ctypedef npy_ulonglong ulonglong_t # <<<<<<<<<<<<<< @@ -685,7 +937,7 @@ typedef npy_ulonglong __pyx_t_5numpy_ulong_t; */ typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":755 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":757 * ctypedef npy_ulonglong ulonglong_t * * ctypedef npy_intp intp_t # <<<<<<<<<<<<<< @@ -694,7 +946,7 @@ typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t; */ typedef npy_intp __pyx_t_5numpy_intp_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":756 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":758 * * ctypedef npy_intp intp_t * ctypedef npy_uintp uintp_t # <<<<<<<<<<<<<< @@ -703,7 +955,7 @@ typedef npy_intp __pyx_t_5numpy_intp_t; */ typedef npy_uintp __pyx_t_5numpy_uintp_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":758 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":760 * ctypedef npy_uintp uintp_t * * ctypedef npy_double float_t # <<<<<<<<<<<<<< @@ -712,7 +964,7 @@ typedef npy_uintp __pyx_t_5numpy_uintp_t; */ typedef npy_double __pyx_t_5numpy_float_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":759 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":761 * * ctypedef npy_double float_t * ctypedef npy_double double_t # <<<<<<<<<<<<<< @@ -721,7 +973,7 @@ typedef npy_double __pyx_t_5numpy_float_t; */ typedef npy_double __pyx_t_5numpy_double_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":760 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":762 * ctypedef npy_double float_t * ctypedef npy_double double_t * ctypedef npy_longdouble longdouble_t # <<<<<<<<<<<<<< @@ -730,7 +982,7 @@ typedef npy_double __pyx_t_5numpy_double_t; */ typedef npy_longdouble __pyx_t_5numpy_longdouble_t; -/* "silx/math/medianfilter/medianfilter.pyx":41 +/* "silx/math/medianfilter/medianfilter.pyx":40 * from libcpp cimport bool * * ctypedef unsigned long uint64 # <<<<<<<<<<<<<< @@ -739,7 +991,7 @@ typedef npy_longdouble __pyx_t_5numpy_longdouble_t; */ typedef unsigned long __pyx_t_4silx_4math_12medianfilter_12medianfilter_uint64; -/* "silx/math/medianfilter/medianfilter.pyx":42 +/* "silx/math/medianfilter/medianfilter.pyx":41 * * ctypedef unsigned long uint64 * ctypedef unsigned int uint32 # <<<<<<<<<<<<<< @@ -748,7 +1000,7 @@ typedef unsigned long __pyx_t_4silx_4math_12medianfilter_12medianfilter_uint64; */ typedef unsigned int __pyx_t_4silx_4math_12medianfilter_12medianfilter_uint32; -/* "silx/math/medianfilter/medianfilter.pyx":43 +/* "silx/math/medianfilter/medianfilter.pyx":42 * ctypedef unsigned long uint64 * ctypedef unsigned int uint32 * ctypedef unsigned short uint16 # <<<<<<<<<<<<<< @@ -756,6 +1008,7 @@ typedef unsigned int __pyx_t_4silx_4math_12medianfilter_12medianfilter_uint32; * */ typedef unsigned short __pyx_t_4silx_4math_12medianfilter_12medianfilter_uint16; +/* Declarations.proto */ #if CYTHON_CCOMPLEX #ifdef __cplusplus typedef ::std::complex< float > __pyx_t_float_complex; @@ -765,7 +1018,9 @@ typedef unsigned short __pyx_t_4silx_4math_12medianfilter_12medianfilter_uint16; #else typedef struct { float real, imag; } __pyx_t_float_complex; #endif +static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float, float); +/* Declarations.proto */ #if CYTHON_CCOMPLEX #ifdef __cplusplus typedef ::std::complex< double > __pyx_t_double_complex; @@ -775,6 +1030,7 @@ typedef unsigned short __pyx_t_4silx_4math_12medianfilter_12medianfilter_uint16; #else typedef struct { double real, imag; } __pyx_t_double_complex; #endif +static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double, double); /*--- Type declarations ---*/ @@ -783,7 +1039,7 @@ struct __pyx_MemviewEnum_obj; struct __pyx_memoryview_obj; struct __pyx_memoryviewslice_obj; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":762 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":764 * ctypedef npy_longdouble longdouble_t * * ctypedef npy_cfloat cfloat_t # <<<<<<<<<<<<<< @@ -792,7 +1048,7 @@ struct __pyx_memoryviewslice_obj; */ typedef npy_cfloat __pyx_t_5numpy_cfloat_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":763 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":765 * * ctypedef npy_cfloat cfloat_t * ctypedef npy_cdouble cdouble_t # <<<<<<<<<<<<<< @@ -801,7 +1057,7 @@ typedef npy_cfloat __pyx_t_5numpy_cfloat_t; */ typedef npy_cdouble __pyx_t_5numpy_cdouble_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":764 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":766 * ctypedef npy_cfloat cfloat_t * ctypedef npy_cdouble cdouble_t * ctypedef npy_clongdouble clongdouble_t # <<<<<<<<<<<<<< @@ -810,7 +1066,7 @@ typedef npy_cdouble __pyx_t_5numpy_cdouble_t; */ typedef npy_clongdouble __pyx_t_5numpy_clongdouble_t; -/* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":766 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":768 * ctypedef npy_clongdouble clongdouble_t * * ctypedef npy_cdouble complex_t # <<<<<<<<<<<<<< @@ -819,7 +1075,7 @@ typedef npy_clongdouble __pyx_t_5numpy_clongdouble_t; */ typedef npy_cdouble __pyx_t_5numpy_complex_t; -/* "View.MemoryView":99 +/* "View.MemoryView":103 * * @cname("__pyx_array") * cdef class array: # <<<<<<<<<<<<<< @@ -828,6 +1084,7 @@ typedef npy_cdouble __pyx_t_5numpy_complex_t; */ struct __pyx_array_obj { PyObject_HEAD + struct __pyx_vtabstruct_array *__pyx_vtab; char *data; Py_ssize_t len; char *format; @@ -843,7 +1100,7 @@ struct __pyx_array_obj { }; -/* "View.MemoryView":269 +/* "View.MemoryView":275 * * @cname('__pyx_MemviewEnum') * cdef class Enum(object): # <<<<<<<<<<<<<< @@ -856,7 +1113,7 @@ struct __pyx_MemviewEnum_obj { }; -/* "View.MemoryView":302 +/* "View.MemoryView":326 * * @cname('__pyx_memoryview') * cdef class memoryview(object): # <<<<<<<<<<<<<< @@ -879,7 +1136,7 @@ struct __pyx_memoryview_obj { }; -/* "View.MemoryView":922 +/* "View.MemoryView":951 * * @cname('__pyx_memoryviewslice') * cdef class _memoryviewslice(memoryview): # <<<<<<<<<<<<<< @@ -896,7 +1153,21 @@ struct __pyx_memoryviewslice_obj { -/* "View.MemoryView":302 +/* "View.MemoryView":103 + * + * @cname("__pyx_array") + * cdef class array: # <<<<<<<<<<<<<< + * + * cdef: + */ + +struct __pyx_vtabstruct_array { + PyObject *(*get_memview)(struct __pyx_array_obj *); +}; +static struct __pyx_vtabstruct_array *__pyx_vtabptr_array; + + +/* "View.MemoryView":326 * * @cname('__pyx_memoryview') * cdef class memoryview(object): # <<<<<<<<<<<<<< @@ -916,7 +1187,7 @@ struct __pyx_vtabstruct_memoryview { static struct __pyx_vtabstruct_memoryview *__pyx_vtabptr_memoryview; -/* "View.MemoryView":922 +/* "View.MemoryView":951 * * @cname('__pyx_memoryviewslice') * cdef class _memoryviewslice(memoryview): # <<<<<<<<<<<<<< @@ -928,6 +1199,9 @@ struct __pyx_vtabstruct__memoryviewslice { struct __pyx_vtabstruct_memoryview __pyx_base; }; static struct __pyx_vtabstruct__memoryviewslice *__pyx_vtabptr__memoryviewslice; + +/* --- Runtime support code (head) --- */ +/* Refnanny.proto */ #ifndef CYTHON_REFNANNY #define CYTHON_REFNANNY 0 #endif @@ -944,19 +1218,19 @@ static struct __pyx_vtabstruct__memoryviewslice *__pyx_vtabptr__memoryviewslice; static __Pyx_RefNannyAPIStruct *__Pyx_RefNannyImportAPI(const char *modname); #define __Pyx_RefNannyDeclarations void *__pyx_refnanny = NULL; 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#define __Pyx_XGOTREF(r) #define __Pyx_XGIVEREF(r) #endif -#define __Pyx_XDECREF_SET(r, v) do { \ - PyObject *tmp = (PyObject *) r; \ - r = v; __Pyx_XDECREF(tmp); \ +#define __Pyx_XDECREF_SET(r, v) do {\ + PyObject *tmp = (PyObject *) r;\ + r = v; __Pyx_XDECREF(tmp);\ } while (0) -#define __Pyx_DECREF_SET(r, v) do { \ - PyObject *tmp = (PyObject *) r; \ - r = v; __Pyx_DECREF(tmp); \ +#define __Pyx_DECREF_SET(r, v) do {\ + PyObject *tmp = (PyObject *) r;\ + r = v; __Pyx_DECREF(tmp);\ } while (0) #define __Pyx_CLEAR(r) do { PyObject* tmp = ((PyObject*)(r)); r = NULL; __Pyx_DECREF(tmp);} while(0) #define __Pyx_XCLEAR(r) do { if((r) != NULL) {PyObject* tmp = ((PyObject*)(r)); r = NULL; __Pyx_DECREF(tmp);}} while(0) -#if CYTHON_COMPILING_IN_CPYTHON +/* PyObjectGetAttrStr.proto */ +#if CYTHON_USE_TYPE_SLOTS static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStr(PyObject* obj, PyObject* attr_name) { PyTypeObject* tp = Py_TYPE(obj); if (likely(tp->tp_getattro)) @@ -1005,39 +1280,97 @@ static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStr(PyObject* obj, PyObject #define __Pyx_PyObject_GetAttrStr(o,n) PyObject_GetAttr(o,n) #endif +/* GetBuiltinName.proto */ static PyObject *__Pyx_GetBuiltinName(PyObject *name); +/* RaiseDoubleKeywords.proto */ static void __Pyx_RaiseDoubleKeywordsError(const char* func_name, PyObject* kw_name); -static int __Pyx_ParseOptionalKeywords(PyObject *kwds, PyObject **argnames[], \ - PyObject *kwds2, PyObject *values[], Py_ssize_t num_pos_args, \ +/* ParseKeywords.proto */ +static int __Pyx_ParseOptionalKeywords(PyObject *kwds, PyObject **argnames[],\ + PyObject *kwds2, PyObject *values[], Py_ssize_t num_pos_args,\ const char* function_name); +/* RaiseArgTupleInvalid.proto */ static void __Pyx_RaiseArgtupleInvalid(const char* func_name, int exact, Py_ssize_t num_min, Py_ssize_t num_max, Py_ssize_t num_found); +/* GetModuleGlobalName.proto */ static CYTHON_INLINE PyObject *__Pyx_GetModuleGlobalName(PyObject *name); +/* PyFunctionFastCall.proto */ +#if CYTHON_FAST_PYCALL +#define __Pyx_PyFunction_FastCall(func, args, nargs)\ + __Pyx_PyFunction_FastCallDict((func), (args), (nargs), NULL) +#if 1 || PY_VERSION_HEX < 0x030600B1 +static PyObject *__Pyx_PyFunction_FastCallDict(PyObject *func, PyObject **args, int nargs, PyObject *kwargs); +#else +#define __Pyx_PyFunction_FastCallDict(func, args, nargs, kwargs) _PyFunction_FastCallDict(func, args, nargs, kwargs) +#endif +#endif + +/* PyCFunctionFastCall.proto */ +#if CYTHON_FAST_PYCCALL +static CYTHON_INLINE PyObject *__Pyx_PyCFunction_FastCall(PyObject *func, PyObject **args, Py_ssize_t nargs); +#else +#define __Pyx_PyCFunction_FastCall(func, args, nargs) (assert(0), NULL) +#endif + +/* PyObjectCall.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw); #else #define __Pyx_PyObject_Call(func, arg, kw) PyObject_Call(func, arg, kw) #endif -#define __Pyx_GetItemInt(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck) \ - (__Pyx_fits_Py_ssize_t(i, type, is_signed) ? \ - __Pyx_GetItemInt_Fast(o, (Py_ssize_t)i, is_list, wraparound, boundscheck) : \ - (is_list ? (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL) : \ +/* PySequenceContains.proto */ +static CYTHON_INLINE int __Pyx_PySequence_ContainsTF(PyObject* item, PyObject* seq, int eq) { + int result = PySequence_Contains(seq, item); + return unlikely(result < 0) ? result : (result == (eq == Py_EQ)); +} + +/* PyThreadStateGet.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_PyThreadState_declare PyThreadState *__pyx_tstate; +#define __Pyx_PyThreadState_assign __pyx_tstate = PyThreadState_GET(); +#else +#define __Pyx_PyThreadState_declare +#define __Pyx_PyThreadState_assign +#endif + +/* PyErrFetchRestore.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_ErrRestoreWithState(type, value, tb) __Pyx_ErrRestoreInState(PyThreadState_GET(), type, value, tb) +#define __Pyx_ErrFetchWithState(type, value, tb) __Pyx_ErrFetchInState(PyThreadState_GET(), type, value, tb) +#define __Pyx_ErrRestore(type, value, tb) __Pyx_ErrRestoreInState(__pyx_tstate, type, value, tb) +#define __Pyx_ErrFetch(type, value, tb) __Pyx_ErrFetchInState(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx_ErrRestoreInState(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb); +static CYTHON_INLINE void __Pyx_ErrFetchInState(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#else +#define __Pyx_ErrRestoreWithState(type, value, tb) PyErr_Restore(type, value, tb) +#define __Pyx_ErrFetchWithState(type, value, tb) PyErr_Fetch(type, value, tb) +#define __Pyx_ErrRestore(type, value, tb) PyErr_Restore(type, value, tb) +#define __Pyx_ErrFetch(type, value, tb) PyErr_Fetch(type, value, tb) +#endif + +/* RaiseException.proto */ +static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause); + +/* GetItemInt.proto */ +#define __Pyx_GetItemInt(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\ + (__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\ + __Pyx_GetItemInt_Fast(o, (Py_ssize_t)i, is_list, wraparound, boundscheck) :\ + (is_list ? (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL) :\ __Pyx_GetItemInt_Generic(o, to_py_func(i)))) -#define __Pyx_GetItemInt_List(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck) \ - (__Pyx_fits_Py_ssize_t(i, type, is_signed) ? \ - __Pyx_GetItemInt_List_Fast(o, (Py_ssize_t)i, wraparound, boundscheck) : \ +#define __Pyx_GetItemInt_List(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\ + (__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\ + __Pyx_GetItemInt_List_Fast(o, (Py_ssize_t)i, wraparound, boundscheck) :\ (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL)) static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, int wraparound, int boundscheck); -#define __Pyx_GetItemInt_Tuple(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck) \ - (__Pyx_fits_Py_ssize_t(i, type, is_signed) ? \ - __Pyx_GetItemInt_Tuple_Fast(o, (Py_ssize_t)i, wraparound, boundscheck) : \ +#define __Pyx_GetItemInt_Tuple(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\ + (__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\ + __Pyx_GetItemInt_Tuple_Fast(o, (Py_ssize_t)i, wraparound, boundscheck) :\ (PyErr_SetString(PyExc_IndexError, "tuple index out of range"), (PyObject*)NULL)) static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, int wraparound, int boundscheck); @@ -1045,21 +1378,24 @@ static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i, int is_list, int wraparound, int boundscheck); -static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb); -static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb); - -static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause); - +/* PyObjectCallMethO.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg); #endif +/* PyObjectCallOneArg.proto */ static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg); +/* BufferFormatCheck.proto */ static CYTHON_INLINE int __Pyx_GetBufferAndValidate(Py_buffer* buf, PyObject* obj, __Pyx_TypeInfo* dtype, int flags, int nd, int cast, __Pyx_BufFmt_StackElem* stack); static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info); +static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const char* ts); +static void __Pyx_BufFmt_Init(__Pyx_BufFmt_Context* ctx, + __Pyx_BufFmt_StackElem* stack, + __Pyx_TypeInfo* type); // PROTO +/* MemviewSliceInit.proto */ #define __Pyx_BUF_MAX_NDIMS %(BUF_MAX_NDIMS)d #define __Pyx_MEMVIEW_DIRECT 1 #define __Pyx_MEMVIEW_PTR 2 @@ -1085,60 +1421,120 @@ static CYTHON_INLINE int __pyx_sub_acquisition_count_locked( static CYTHON_INLINE void __Pyx_INC_MEMVIEW(__Pyx_memviewslice *, int, int); static CYTHON_INLINE void __Pyx_XDEC_MEMVIEW(__Pyx_memviewslice *, int, int); +/* ArgTypeTest.proto */ static CYTHON_INLINE int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed, const char *name, int exact); #define __Pyx_BufPtrCContig2d(type, buf, i0, s0, i1, s1) ((type)((char*)buf + i0 * s0) + i1) #define __Pyx_BufPtrCContig1d(type, buf, i0, s0) ((type)buf + i0) +/* DictGetItem.proto */ +#if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY +static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key) { + PyObject *value; + value = PyDict_GetItemWithError(d, key); + if (unlikely(!value)) { + if (!PyErr_Occurred()) { + PyObject* args = PyTuple_Pack(1, key); + if (likely(args)) + PyErr_SetObject(PyExc_KeyError, args); + Py_XDECREF(args); + } + return NULL; + } + Py_INCREF(value); + return value; +} +#else + #define __Pyx_PyDict_GetItem(d, key) PyObject_GetItem(d, key) +#endif + +/* RaiseTooManyValuesToUnpack.proto */ static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected); +/* RaiseNeedMoreValuesToUnpack.proto */ static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index); +/* RaiseNoneIterError.proto */ static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void); +/* ExtTypeTest.proto */ static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type); +/* SaveResetException.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_ExceptionSave(type, value, tb) __Pyx__ExceptionSave(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#define __Pyx_ExceptionReset(type, value, tb) __Pyx__ExceptionReset(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb); +#else +#define __Pyx_ExceptionSave(type, value, tb) PyErr_GetExcInfo(type, value, tb) +#define __Pyx_ExceptionReset(type, value, tb) PyErr_SetExcInfo(type, value, tb) +#endif + +/* PyErrExceptionMatches.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_PyErr_ExceptionMatches(err) __Pyx_PyErr_ExceptionMatchesInState(__pyx_tstate, err) +static CYTHON_INLINE int __Pyx_PyErr_ExceptionMatchesInState(PyThreadState* tstate, PyObject* err); +#else +#define __Pyx_PyErr_ExceptionMatches(err) PyErr_ExceptionMatches(err) +#endif + +/* GetException.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_GetException(type, value, tb) __Pyx__GetException(__pyx_tstate, type, value, tb) +static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#else +static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb); +#endif + +/* IncludeStringH.proto */ #include <string.h> +/* BytesEquals.proto */ static CYTHON_INLINE int __Pyx_PyBytes_Equals(PyObject* s1, PyObject* s2, int equals); +/* UnicodeEquals.proto */ static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals); +/* StrEquals.proto */ #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyString_Equals __Pyx_PyUnicode_Equals #else #define __Pyx_PyString_Equals __Pyx_PyBytes_Equals #endif -static CYTHON_INLINE Py_ssize_t __Pyx_div_Py_ssize_t(Py_ssize_t, Py_ssize_t); /* proto */ - -#ifndef __PYX_FORCE_INIT_THREADS - #define __PYX_FORCE_INIT_THREADS 0 -#endif +/* None.proto */ +static CYTHON_INLINE Py_ssize_t __Pyx_div_Py_ssize_t(Py_ssize_t, Py_ssize_t); -#define UNARY_NEG_WOULD_OVERFLOW(x) (((x) < 0) & ((unsigned long)(x) == 0-(unsigned long)(x))) +/* UnaryNegOverflows.proto */ +#define UNARY_NEG_WOULD_OVERFLOW(x)\ + (((x) < 0) & ((unsigned long)(x) == 0-(unsigned long)(x))) static CYTHON_UNUSED int __pyx_array_getbuffer(PyObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /*proto*/ -static PyObject *get_memview(PyObject *__pyx_v_self); /*proto*/ +static PyObject *__pyx_array_get_memview(struct __pyx_array_obj *); /*proto*/ +/* GetAttr.proto */ static CYTHON_INLINE PyObject *__Pyx_GetAttr(PyObject *, PyObject *); +/* decode_c_string.proto */ static CYTHON_INLINE PyObject* __Pyx_decode_c_string( const char* cstring, Py_ssize_t start, Py_ssize_t stop, const char* encoding, const char* errors, PyObject* (*decode_func)(const char *s, Py_ssize_t size, const char *errors)); -static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb); -static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb); - -static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb); - +/* SwapException.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_ExceptionSwap(type, value, tb) __Pyx__ExceptionSwap(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx__ExceptionSwap(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#else static CYTHON_INLINE void __Pyx_ExceptionSwap(PyObject **type, PyObject **value, PyObject **tb); +#endif + +/* Import.proto */ +static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level); static CYTHON_UNUSED int __pyx_memoryview_getbuffer(PyObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /*proto*/ -static PyObject *__pyx_memoryview_transpose(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview__get__base(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview_get_shape(PyObject *__pyx_v_self); /*proto*/ -#if CYTHON_COMPILING_IN_CPYTHON +/* ListCompAppend.proto */ +#if CYTHON_USE_PYLIST_INTERNALS && CYTHON_ASSUME_SAFE_MACROS static CYTHON_INLINE int __Pyx_ListComp_Append(PyObject* list, PyObject* x) { PyListObject* L = (PyListObject*) list; Py_ssize_t len = Py_SIZE(list); @@ -1154,12 +1550,15 @@ static CYTHON_INLINE int __Pyx_ListComp_Append(PyObject* list, PyObject* x) { #define __Pyx_ListComp_Append(L,x) PyList_Append(L,x) #endif -static PyObject *__pyx_memoryview_get_strides(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview_get_suboffsets(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview_get_ndim(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview_get_itemsize(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview_get_nbytes(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview_get_size(PyObject *__pyx_v_self); /*proto*/ +/* PyIntBinop.proto */ +#if !CYTHON_COMPILING_IN_PYPY +static PyObject* __Pyx_PyInt_AddObjC(PyObject *op1, PyObject *op2, long intval, int inplace); +#else +#define __Pyx_PyInt_AddObjC(op1, op2, intval, inplace)\ + (inplace ? PyNumber_InPlaceAdd(op1, op2) : PyNumber_Add(op1, op2)) +#endif + +/* ListExtend.proto */ static CYTHON_INLINE int __Pyx_PyList_Extend(PyObject* L, PyObject* v) { #if CYTHON_COMPILING_IN_CPYTHON PyObject* none = _PyList_Extend((PyListObject*)L, v); @@ -1172,7 +1571,8 @@ static CYTHON_INLINE int __Pyx_PyList_Extend(PyObject* L, PyObject* v) { #endif } -#if CYTHON_COMPILING_IN_CPYTHON +/* ListAppend.proto */ +#if CYTHON_USE_PYLIST_INTERNALS && CYTHON_ASSUME_SAFE_MACROS static CYTHON_INLINE int __Pyx_PyList_Append(PyObject* list, PyObject* x) { PyListObject* L = (PyListObject*) list; Py_ssize_t len = Py_SIZE(list); @@ -1188,20 +1588,29 @@ static CYTHON_INLINE int __Pyx_PyList_Append(PyObject* list, PyObject* x) { #define __Pyx_PyList_Append(L,x) PyList_Append(L,x) #endif +/* None.proto */ static CYTHON_INLINE void __Pyx_RaiseUnboundLocalError(const char *varname); -static CYTHON_INLINE long __Pyx_div_long(long, long); /* proto */ +/* ForceInitThreads.proto */ +#ifndef __PYX_FORCE_INIT_THREADS + #define __PYX_FORCE_INIT_THREADS 0 +#endif -static PyObject *__pyx_memoryviewslice__get__base(PyObject *__pyx_v_self); /*proto*/ +/* None.proto */ +static CYTHON_INLINE long __Pyx_div_long(long, long); + +/* WriteUnraisableException.proto */ static void __Pyx_WriteUnraisable(const char *name, int clineno, int lineno, const char *filename, - int full_traceback); + int full_traceback, int nogil); +/* SetVTable.proto */ static int __Pyx_SetVtable(PyObject *dict, void *vtable); +/* CodeObjectCache.proto */ typedef struct { - int code_line; PyCodeObject* code_object; + int code_line; } __Pyx_CodeObjectCacheEntry; struct __Pyx_CodeObjectCache { int count; @@ -1213,9 +1622,20 @@ static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int co static PyCodeObject *__pyx_find_code_object(int code_line); static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object); +/* AddTraceback.proto */ static void __Pyx_AddTraceback(const char *funcname, int c_line, int py_line, const char *filename); +#if PY_MAJOR_VERSION < 3 + static int __Pyx_GetBuffer(PyObject *obj, Py_buffer *view, int flags); + static void __Pyx_ReleaseBuffer(Py_buffer *view); +#else + #define __Pyx_GetBuffer PyObject_GetBuffer + #define __Pyx_ReleaseBuffer PyBuffer_Release +#endif + + +/* BufferStructDeclare.proto */ typedef struct { Py_ssize_t shape, strides, suboffsets; } __Pyx_Buf_DimInfo; @@ -1229,22 +1649,26 @@ typedef struct { __Pyx_Buf_DimInfo diminfo[8]; } __Pyx_LocalBuf_ND; -#if PY_MAJOR_VERSION < 3 - static int __Pyx_GetBuffer(PyObject *obj, Py_buffer *view, int flags); - static void __Pyx_ReleaseBuffer(Py_buffer *view); -#else - #define __Pyx_GetBuffer PyObject_GetBuffer - #define __Pyx_ReleaseBuffer PyBuffer_Release -#endif - - +/* None.proto */ static Py_ssize_t __Pyx_zeros[] = {0, 0, 0, 0, 0, 0, 0, 0}; static Py_ssize_t __Pyx_minusones[] = {-1, -1, -1, -1, -1, -1, -1, -1}; -static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level); +/* MemviewSliceIsContig.proto */ +static int __pyx_memviewslice_is_contig(const __Pyx_memviewslice mvs, + char order, int ndim); + +/* OverlappingSlices.proto */ +static int __pyx_slices_overlap(__Pyx_memviewslice *slice1, + __Pyx_memviewslice *slice2, + int ndim, size_t itemsize); + +/* Capsule.proto */ +static CYTHON_INLINE PyObject *__pyx_capsule_create(void *p, const char *sig); +/* TypeInfoCompare.proto */ static int __pyx_typeinfo_cmp(__Pyx_TypeInfo *a, __Pyx_TypeInfo *b); +/* MemviewSliceValidateAndInit.proto */ static int __Pyx_ValidateAndInit_memviewslice( int *axes_specs, int c_or_f_flag, @@ -1255,24 +1679,37 @@ static int __Pyx_ValidateAndInit_memviewslice( __Pyx_memviewslice *memviewslice, PyObject *original_obj); +/* ObjectToMemviewSlice.proto */ static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_float(PyObject *); +/* ObjectToMemviewSlice.proto */ static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_dc_nn___pyx_t_5numpy_int32_t(PyObject *); +/* ObjectToMemviewSlice.proto */ static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_double(PyObject *); +/* ObjectToMemviewSlice.proto */ static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_int64_t(PyObject *); +/* ObjectToMemviewSlice.proto */ static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_uint64_t(PyObject *); +/* ObjectToMemviewSlice.proto */ static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_int32_t(PyObject *); +/* ObjectToMemviewSlice.proto */ static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_uint32_t(PyObject *); +/* ObjectToMemviewSlice.proto */ static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_int16_t(PyObject *); +/* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value); +/* CIntToPy.proto */ +static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value); + +/* RealImag.proto */ #if CYTHON_CCOMPLEX #ifdef __cplusplus #define __Pyx_CREAL(z) ((z).real()) @@ -1285,7 +1722,8 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value); #define __Pyx_CREAL(z) ((z).real) #define __Pyx_CIMAG(z) ((z).imag) #endif -#if (defined(_WIN32) || defined(__clang__)) && defined(__cplusplus) && CYTHON_CCOMPLEX +#if defined(__cplusplus) && CYTHON_CCOMPLEX\ + && (defined(_WIN32) || defined(__clang__) || (defined(__GNUC__) && (__GNUC__ >= 5 || __GNUC__ == 4 && __GNUC_MINOR__ >= 4 )) || __cplusplus >= 201103) #define __Pyx_SET_CREAL(z,x) ((z).real(x)) #define __Pyx_SET_CIMAG(z,y) ((z).imag(y)) #else @@ -1293,109 +1731,105 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value); #define __Pyx_SET_CIMAG(z,y) __Pyx_CIMAG(z) = (y) #endif -static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float, float); - +/* Arithmetic.proto */ #if CYTHON_CCOMPLEX - #define __Pyx_c_eqf(a, b) ((a)==(b)) - #define __Pyx_c_sumf(a, b) ((a)+(b)) - #define __Pyx_c_difff(a, b) ((a)-(b)) - #define __Pyx_c_prodf(a, b) ((a)*(b)) - #define __Pyx_c_quotf(a, b) ((a)/(b)) - #define __Pyx_c_negf(a) (-(a)) + #define __Pyx_c_eq_float(a, b) ((a)==(b)) + #define __Pyx_c_sum_float(a, b) ((a)+(b)) + #define __Pyx_c_diff_float(a, b) ((a)-(b)) + #define __Pyx_c_prod_float(a, b) ((a)*(b)) + #define __Pyx_c_quot_float(a, b) ((a)/(b)) + #define __Pyx_c_neg_float(a) (-(a)) #ifdef __cplusplus - #define __Pyx_c_is_zerof(z) ((z)==(float)0) - #define __Pyx_c_conjf(z) (::std::conj(z)) + #define __Pyx_c_is_zero_float(z) ((z)==(float)0) + #define __Pyx_c_conj_float(z) (::std::conj(z)) #if 1 - #define __Pyx_c_absf(z) (::std::abs(z)) - #define __Pyx_c_powf(a, b) (::std::pow(a, b)) + #define __Pyx_c_abs_float(z) (::std::abs(z)) + #define __Pyx_c_pow_float(a, b) (::std::pow(a, b)) #endif #else - #define __Pyx_c_is_zerof(z) ((z)==0) - #define __Pyx_c_conjf(z) (conjf(z)) + #define __Pyx_c_is_zero_float(z) ((z)==0) + #define __Pyx_c_conj_float(z) (conjf(z)) #if 1 - #define __Pyx_c_absf(z) (cabsf(z)) - #define __Pyx_c_powf(a, b) (cpowf(a, b)) + #define __Pyx_c_abs_float(z) (cabsf(z)) + #define __Pyx_c_pow_float(a, b) (cpowf(a, b)) #endif #endif #else - static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prodf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex); - static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex); + static CYTHON_INLINE int __Pyx_c_eq_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sum_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_diff_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prod_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_neg_float(__pyx_t_float_complex); + static CYTHON_INLINE int __Pyx_c_is_zero_float(__pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conj_float(__pyx_t_float_complex); #if 1 - static CYTHON_INLINE float __Pyx_c_absf(__pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE float __Pyx_c_abs_float(__pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_pow_float(__pyx_t_float_complex, __pyx_t_float_complex); #endif #endif -static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double, double); - +/* Arithmetic.proto */ #if CYTHON_CCOMPLEX - #define __Pyx_c_eq(a, b) ((a)==(b)) - #define __Pyx_c_sum(a, b) ((a)+(b)) - #define __Pyx_c_diff(a, b) ((a)-(b)) - #define __Pyx_c_prod(a, b) ((a)*(b)) - #define __Pyx_c_quot(a, b) ((a)/(b)) - #define __Pyx_c_neg(a) (-(a)) + #define __Pyx_c_eq_double(a, b) ((a)==(b)) + #define __Pyx_c_sum_double(a, b) ((a)+(b)) + #define __Pyx_c_diff_double(a, b) ((a)-(b)) + #define __Pyx_c_prod_double(a, b) ((a)*(b)) + #define __Pyx_c_quot_double(a, b) ((a)/(b)) + #define __Pyx_c_neg_double(a) (-(a)) #ifdef __cplusplus - #define __Pyx_c_is_zero(z) ((z)==(double)0) - #define __Pyx_c_conj(z) (::std::conj(z)) + #define __Pyx_c_is_zero_double(z) ((z)==(double)0) + #define __Pyx_c_conj_double(z) (::std::conj(z)) #if 1 - #define __Pyx_c_abs(z) (::std::abs(z)) - #define __Pyx_c_pow(a, b) (::std::pow(a, b)) + #define __Pyx_c_abs_double(z) (::std::abs(z)) + #define __Pyx_c_pow_double(a, b) (::std::pow(a, b)) #endif #else - #define __Pyx_c_is_zero(z) ((z)==0) - #define __Pyx_c_conj(z) (conj(z)) + #define __Pyx_c_is_zero_double(z) ((z)==0) + #define __Pyx_c_conj_double(z) (conj(z)) #if 1 - #define __Pyx_c_abs(z) (cabs(z)) - #define __Pyx_c_pow(a, b) (cpow(a, b)) + #define __Pyx_c_abs_double(z) (cabs(z)) + #define __Pyx_c_pow_double(a, b) (cpow(a, b)) #endif #endif #else - static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex); - static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex); + static CYTHON_INLINE int __Pyx_c_eq_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg_double(__pyx_t_double_complex); + static CYTHON_INLINE int __Pyx_c_is_zero_double(__pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj_double(__pyx_t_double_complex); #if 1 - static CYTHON_INLINE double __Pyx_c_abs(__pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE double __Pyx_c_abs_double(__pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow_double(__pyx_t_double_complex, __pyx_t_double_complex); #endif #endif -static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value); - -static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *); - -static int __pyx_memviewslice_is_contig(const __Pyx_memviewslice *mvs, - char order, int ndim); - -static int __pyx_slices_overlap(__Pyx_memviewslice *slice1, - __Pyx_memviewslice *slice2, - int ndim, size_t itemsize); +/* CIntToPy.proto */ +static CYTHON_INLINE PyObject* __Pyx_PyInt_From_enum__NPY_TYPES(enum NPY_TYPES value); +/* MemviewSliceCopyTemplate.proto */ static __Pyx_memviewslice __pyx_memoryview_copy_new_contig(const __Pyx_memviewslice *from_mvs, const char *mode, int ndim, size_t sizeof_dtype, int contig_flag, int dtype_is_object); -static CYTHON_INLINE PyObject *__pyx_capsule_create(void *p, const char *sig); +/* CIntFromPy.proto */ +static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *); +/* CIntFromPy.proto */ static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *); +/* CIntFromPy.proto */ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *); +/* CheckBinaryVersion.proto */ static int __Pyx_check_binary_version(void); +/* PyIdentifierFromString.proto */ #if !defined(__Pyx_PyIdentifier_FromString) #if PY_MAJOR_VERSION < 3 #define __Pyx_PyIdentifier_FromString(s) PyString_FromString(s) @@ -1404,12 +1838,16 @@ static int __Pyx_check_binary_version(void); #endif #endif +/* ModuleImport.proto */ static PyObject *__Pyx_ImportModule(const char *name); +/* TypeImport.proto */ static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name, size_t size, int strict); +/* InitStrings.proto */ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t); +static PyObject *__pyx_array_get_memview(struct __pyx_array_obj *__pyx_v_self); /* proto*/ static char *__pyx_memoryview_get_item_pointer(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_index); /* proto*/ static PyObject *__pyx_memoryview_is_slice(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_obj); /* proto*/ static PyObject *__pyx_memoryview_setitem_slice_assignment(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_dst, PyObject *__pyx_v_src); /* proto*/ @@ -1430,19 +1868,21 @@ static PyObject *__pyx_memoryviewslice_assign_item_from_object(struct __pyx_memo /* Module declarations from 'cpython.buffer' */ -/* Module declarations from 'cpython.ref' */ - /* Module declarations from 'libc.string' */ /* Module declarations from 'libc.stdio' */ -/* Module declarations from 'cpython.object' */ - /* Module declarations from '__builtin__' */ /* Module declarations from 'cpython.type' */ static PyTypeObject *__pyx_ptype_7cpython_4type_type = 0; +/* Module declarations from 'cpython' */ + +/* Module declarations from 'cpython.object' */ + +/* Module declarations from 'cpython.ref' */ + /* Module declarations from 'libc.stdlib' */ /* Module declarations from 'numpy' */ @@ -1460,12 +1900,13 @@ static PyTypeObject *__pyx_array_type = 0; static PyTypeObject *__pyx_MemviewEnum_type = 0; static PyTypeObject *__pyx_memoryview_type = 0; static PyTypeObject *__pyx_memoryviewslice_type = 0; -static Py_ssize_t __pyx_v_4silx_4math_12medianfilter_12medianfilter_size; static PyObject *generic = 0; static PyObject *strided = 0; static PyObject *indirect = 0; static PyObject *contiguous = 0; static PyObject *indirect_contiguous = 0; +static int __pyx_memoryview_thread_locks_used; +static PyThread_type_lock __pyx_memoryview_thread_locks[8]; static struct __pyx_array_obj *__pyx_array_new(PyObject *, Py_ssize_t, char *, char *, char *); /*proto*/ static void *__pyx_align_pointer(void *, size_t); /*proto*/ static PyObject *__pyx_memoryview_new(PyObject *, int, int, __Pyx_TypeInfo *); /*proto*/ @@ -1513,208 +1954,150 @@ int __pyx_module_is_main_silx__math__medianfilter__medianfilter = 0; static PyObject *__pyx_builtin_ValueError; static PyObject *__pyx_builtin_range; static PyObject *__pyx_builtin_RuntimeError; +static PyObject *__pyx_builtin_ImportError; static PyObject *__pyx_builtin_MemoryError; static PyObject *__pyx_builtin_enumerate; static PyObject *__pyx_builtin_Ellipsis; static PyObject *__pyx_builtin_TypeError; -static PyObject *__pyx_builtin_xrange; static PyObject *__pyx_builtin_id; static PyObject *__pyx_builtin_IndexError; -static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_medfilt1d(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_data, PyObject *__pyx_v_kernel_size, bool __pyx_v_conditional); /* proto */ -static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_2medfilt2d(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_image, PyObject *__pyx_v_kernel_size, bool __pyx_v_conditional); /* proto */ -static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_4medfilt(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_data, PyObject *__pyx_v_kernel_size, bool __pyx_v_conditional); /* proto */ -static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_6check(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_input_buffer, PyObject *__pyx_v_output_buffer); /* proto */ -static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_8_median_filter_float32(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional); /* proto */ -static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_10_median_filter_float64(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional); /* proto */ -static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_12_median_filter_int64(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional); /* proto */ -static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_14_median_filter_uint64(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional); /* proto */ -static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_16_median_filter_int32(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional); /* proto */ -static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_18_median_filter_uint32(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional); /* proto */ -static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_20_median_filter_int16(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional); /* proto */ -static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_22_median_filter_uint16(CYTHON_UNUSED PyObject *__pyx_self, PyArrayObject *__pyx_v_input_buffer, PyArrayObject *__pyx_v_output_buffer, PyArrayObject *__pyx_v_kernel_size, bool __pyx_v_conditional); /* proto */ -static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /* proto */ -static void __pyx_pf_5numpy_7ndarray_2__releasebuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info); /* proto */ -static int __pyx_array_MemoryView_5array___cinit__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_shape, Py_ssize_t __pyx_v_itemsize, PyObject *__pyx_v_format, PyObject *__pyx_v_mode, int __pyx_v_allocate_buffer); /* proto */ -static int __pyx_array_getbuffer_MemoryView_5array_2__getbuffer__(struct __pyx_array_obj *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /* proto */ -static void __pyx_array_MemoryView_5array_4__dealloc__(struct __pyx_array_obj *__pyx_v_self); /* proto */ -static PyObject *get_memview_MemoryView_5array_7memview___get__(struct __pyx_array_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_array_MemoryView_5array_6__getattr__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_attr); /* proto */ -static PyObject *__pyx_array_MemoryView_5array_8__getitem__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_item); /* proto */ -static int __pyx_array_MemoryView_5array_10__setitem__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_item, PyObject *__pyx_v_value); /* proto */ -static int __pyx_MemviewEnum_MemoryView_4Enum___init__(struct __pyx_MemviewEnum_obj *__pyx_v_self, PyObject *__pyx_v_name); /* proto */ -static PyObject *__pyx_MemviewEnum_MemoryView_4Enum_2__repr__(struct __pyx_MemviewEnum_obj *__pyx_v_self); /* proto */ -static int __pyx_memoryview_MemoryView_10memoryview___cinit__(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_obj, int __pyx_v_flags, int __pyx_v_dtype_is_object); /* proto */ -static void __pyx_memoryview_MemoryView_10memoryview_2__dealloc__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_MemoryView_10memoryview_4__getitem__(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_index); /* proto */ -static int __pyx_memoryview_MemoryView_10memoryview_6__setitem__(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_index, PyObject *__pyx_v_value); /* proto */ -static int __pyx_memoryview_getbuffer_MemoryView_10memoryview_8__getbuffer__(struct __pyx_memoryview_obj *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /* proto */ -static PyObject *__pyx_memoryview_transpose_MemoryView_10memoryview_1T___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview__get__base_MemoryView_10memoryview_4base___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_get_shape_MemoryView_10memoryview_5shape___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_get_strides_MemoryView_10memoryview_7strides___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_get_suboffsets_MemoryView_10memoryview_10suboffsets___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_get_ndim_MemoryView_10memoryview_4ndim___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_get_itemsize_MemoryView_10memoryview_8itemsize___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_get_nbytes_MemoryView_10memoryview_6nbytes___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_get_size_MemoryView_10memoryview_4size___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static Py_ssize_t __pyx_memoryview_MemoryView_10memoryview_10__len__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_MemoryView_10memoryview_12__repr__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_MemoryView_10memoryview_14__str__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_MemoryView_10memoryview_16is_c_contig(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_MemoryView_10memoryview_18is_f_contig(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_MemoryView_10memoryview_20copy(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_MemoryView_10memoryview_22copy_fortran(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static void __pyx_memoryviewslice_MemoryView_16_memoryviewslice___dealloc__(struct __pyx_memoryviewslice_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryviewslice__get__base_MemoryView_16_memoryviewslice_4base___get__(struct __pyx_memoryviewslice_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_tp_new_array(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ -static PyObject *__pyx_tp_new_Enum(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ -static PyObject *__pyx_tp_new_memoryview(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ -static PyObject *__pyx_tp_new__memoryviewslice(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ -static char __pyx_k_B[] = "B"; -static char __pyx_k_H[] = "H"; -static char __pyx_k_I[] = "I"; -static char __pyx_k_L[] = "L"; -static char __pyx_k_O[] = "O"; -static char __pyx_k_Q[] = "Q"; -static char __pyx_k_b[] = "b"; -static char __pyx_k_c[] = "c"; -static char __pyx_k_d[] = "d"; -static char __pyx_k_f[] = "f"; -static char __pyx_k_g[] = "g"; -static char __pyx_k_h[] = "h"; -static char __pyx_k_i[] = "i"; -static char __pyx_k_l[] = "l"; -static char __pyx_k_q[] = "q"; -static char __pyx_k_x[] = "x"; -static char __pyx_k_Zd[] = "Zd"; -static char __pyx_k_Zf[] = "Zf"; -static char __pyx_k_Zg[] = "Zg"; -static char __pyx_k_id[] = "id"; -static char __pyx_k_MIT[] = "MIT"; -static char __pyx_k_obj[] = "obj"; -static char __pyx_k_base[] = "base"; -static char __pyx_k_data[] = "data"; -static char __pyx_k_date[] = "__date__"; -static char __pyx_k_main[] = "__main__"; -static char __pyx_k_mode[] = "mode"; -static char __pyx_k_name[] = "name"; -static char __pyx_k_ndim[] = "ndim"; -static char __pyx_k_pack[] = "pack"; -static char __pyx_k_size[] = "size"; -static char __pyx_k_step[] = "step"; -static char __pyx_k_stop[] = "stop"; -static char __pyx_k_test[] = "__test__"; -static char __pyx_k_array[] = "array"; -static char __pyx_k_check[] = "check"; -static char __pyx_k_class[] = "__class__"; -static char __pyx_k_dtype[] = "dtype"; -static char __pyx_k_error[] = "error"; -static char __pyx_k_flags[] = "flags"; -static char __pyx_k_image[] = "image"; -static char __pyx_k_int16[] = "int16"; -static char __pyx_k_int32[] = "int32"; -static char __pyx_k_int64[] = "int64"; -static char __pyx_k_numpy[] = "numpy"; -static char __pyx_k_range[] = "range"; -static char __pyx_k_shape[] = "shape"; -static char __pyx_k_start[] = "start"; -static char __pyx_k_format[] = "format"; -static char __pyx_k_import[] = "__import__"; -static char __pyx_k_name_2[] = "__name__"; -static char __pyx_k_struct[] = "struct"; -static char __pyx_k_uint16[] = "uint16"; -static char __pyx_k_uint32[] = "uint32"; -static char __pyx_k_uint64[] = "uint64"; -static char __pyx_k_unpack[] = "unpack"; -static char __pyx_k_xrange[] = "xrange"; -static char __pyx_k_H_Payno[] = "H. Payno"; -static char __pyx_k_authors[] = "__authors__"; -static char __pyx_k_float32[] = "float32"; -static char __pyx_k_float64[] = "float64"; -static char __pyx_k_fortran[] = "fortran"; -static char __pyx_k_ker_dim[] = "ker_dim"; -static char __pyx_k_license[] = "__license__"; -static char __pyx_k_medfilt[] = "medfilt"; -static char __pyx_k_memview[] = "memview"; -static char __pyx_k_reshape[] = "reshape"; -static char __pyx_k_Ellipsis[] = "Ellipsis"; -static char __pyx_k_itemsize[] = "itemsize"; -static char __pyx_k_reshaped[] = "reshaped"; -static char __pyx_k_J_Kieffer[] = "J. Kieffer"; -static char __pyx_k_TypeError[] = "TypeError"; -static char __pyx_k_enumerate[] = "enumerate"; -static char __pyx_k_image_dim[] = "image_dim"; -static char __pyx_k_medfilt1d[] = "medfilt1d"; -static char __pyx_k_medfilt2d[] = "medfilt2d"; -static char __pyx_k_02_05_2017[] = "02/05/2017"; -static char __pyx_k_IndexError[] = "IndexError"; -static char __pyx_k_ValueError[] = "ValueError"; -static char __pyx_k_pyx_vtable[] = "__pyx_vtable__"; -static char __pyx_k_zeros_like[] = "zeros_like"; -static char __pyx_k_MemoryError[] = "MemoryError"; -static char __pyx_k_conditional[] = "conditional"; -static char __pyx_k_kernel_size[] = "kernel_size"; -static char __pyx_k_medfilterfc[] = "medfilterfc"; -static char __pyx_k_C_CONTIGUOUS[] = "C_CONTIGUOUS"; -static char __pyx_k_RuntimeError[] = "RuntimeError"; -static char __pyx_k_buffer_shape[] = "buffer_shape"; -static char __pyx_k_input_buffer[] = "input_buffer"; -static char __pyx_k_output_buffer[] = "output_buffer"; -static char __pyx_k_pyx_getbuffer[] = "__pyx_getbuffer"; -static char __pyx_k_allocate_buffer[] = "allocate_buffer"; -static char __pyx_k_dtype_is_object[] = "dtype_is_object"; -static char __pyx_k_strided_and_direct[] = "<strided and direct>"; -static char __pyx_k_median_filter_int16[] = "_median_filter_int16"; -static char __pyx_k_median_filter_int32[] = "_median_filter_int32"; -static char __pyx_k_median_filter_int64[] = "_median_filter_int64"; -static char __pyx_k_median_filter_uint16[] = "_median_filter_uint16"; -static char __pyx_k_median_filter_uint32[] = "_median_filter_uint32"; -static char __pyx_k_median_filter_uint64[] = "_median_filter_uint64"; -static char __pyx_k_strided_and_indirect[] = "<strided and indirect>"; -static char __pyx_k_contiguous_and_direct[] = "<contiguous and direct>"; -static char __pyx_k_median_filter_float32[] = "_median_filter_float32"; -static char __pyx_k_median_filter_float64[] = "_median_filter_float64"; -static char __pyx_k_MemoryView_of_r_object[] = "<MemoryView of %r object>"; -static char __pyx_k_MemoryView_of_r_at_0x_x[] = "<MemoryView of %r at 0x%x>"; -static char __pyx_k_contiguous_and_indirect[] = "<contiguous and indirect>"; -static char __pyx_k_Cannot_index_with_type_s[] = "Cannot index with type '%s'"; -static char __pyx_k_getbuffer_obj_view_flags[] = "getbuffer(obj, view, flags)"; -static char __pyx_k_Dimension_d_is_not_direct[] = "Dimension %d is not direct"; -static char __pyx_k_Invalid_shape_in_axis_d_d[] = "Invalid shape in axis %d: %d."; -static char __pyx_k_Index_out_of_bounds_axis_d[] = "Index out of bounds (axis %d)"; -static char __pyx_k_Step_may_not_be_zero_axis_d[] = "Step may not be zero (axis %d)"; -static char __pyx_k_itemsize_0_for_cython_array[] = "itemsize <= 0 for cython.array"; -static char __pyx_k_ndarray_is_not_C_contiguous[] = "ndarray is not C contiguous"; -static char __pyx_k_unable_to_allocate_array_data[] = "unable to allocate array data."; -static char __pyx_k_input_buffer_dimension_must_mo[] = "<input_buffer> dimension must mo higher than 2."; -static char __pyx_k_strided_and_direct_or_indirect[] = "<strided and direct or indirect>"; -static char __pyx_k_users_payno_Documents_dev_esrf[] = "/users/payno/Documents/dev/esrf/silx/paynoSilx/silx/silx/math/medianfilter/medianfilter.pyx"; -static char __pyx_k_Invalid_data_shape_Dimemsion_of[] = "Invalid data shape. Dimemsion of the arary should be 1 or 2"; -static char __pyx_k_input_buffer_must_be_a_C_CONTIG[] = "<input_buffer> must be a C_CONTIGUOUS numpy array."; -static char __pyx_k_output_buffer_dimension_must_mo[] = "<output_buffer> dimension must mo higher than 2."; -static char __pyx_k_output_buffer_must_be_a_C_CONTI[] = "<output_buffer> must be a C_CONTIGUOUS numpy array."; -static char __pyx_k_s_type_is_not_managed_by_the_me[] = "%s type is not managed by the median filter"; -static char __pyx_k_unknown_dtype_code_in_numpy_pxd[] = "unknown dtype code in numpy.pxd (%d)"; -static char __pyx_k_All_dimensions_preceding_dimensi[] = "All dimensions preceding dimension %d must be indexed and not sliced"; -static char __pyx_k_Buffer_view_does_not_expose_stri[] = "Buffer view does not expose strides"; -static char __pyx_k_Can_only_create_a_buffer_that_is[] = "Can only create a buffer that is contiguous in memory."; -static char __pyx_k_Cannot_transpose_memoryview_with[] = "Cannot transpose memoryview with indirect dimensions"; -static char __pyx_k_Empty_shape_tuple_for_cython_arr[] = "Empty shape tuple for cython.array"; -static char __pyx_k_Format_string_allocated_too_shor[] = "Format string allocated too short, see comment in numpy.pxd"; -static char __pyx_k_Indirect_dimensions_not_supporte[] = "Indirect dimensions not supported"; -static char __pyx_k_Invalid_mode_expected_c_or_fortr[] = "Invalid mode, expected 'c' or 'fortran', got %s"; -static char __pyx_k_Non_native_byte_order_not_suppor[] = "Non-native byte order not supported"; -static char __pyx_k_Out_of_bounds_on_buffer_access_a[] = "Out of bounds on buffer access (axis %d)"; -static char __pyx_k_This_module_provides_median_filt[] = "This module provides median filter function for 1D and 2D arrays.\n"; -static char __pyx_k_Unable_to_convert_item_to_object[] = "Unable to convert item to object"; -static char __pyx_k_got_differing_extents_in_dimensi[] = "got differing extents in dimension %d (got %d and %d)"; -static char __pyx_k_input_buffer_and_output_buffer_m[] = "input buffer and output_buffer must be of the same type"; -static char __pyx_k_ndarray_is_not_Fortran_contiguou[] = "ndarray is not Fortran contiguous"; -static char __pyx_k_silx_math_medianfilter_medianfil[] = "silx.math.medianfilter.medianfilter"; -static char __pyx_k_unable_to_allocate_shape_and_str[] = "unable to allocate shape and strides."; -static char __pyx_k_Format_string_allocated_too_shor_2[] = "Format string allocated too short."; -static char __pyx_k_input_buffer_and_output_buffer_m_2[] = "input buffer and output_buffer must be of the same dimension and same dimension"; +static const char __pyx_k_O[] = "O"; +static const char __pyx_k_c[] = "c"; +static const char __pyx_k_y[] = "y"; +static const char __pyx_k_id[] = "id"; +static const char __pyx_k_MIT[] = "MIT"; +static const char __pyx_k_err[] = "err"; +static const char __pyx_k_obj[] = "obj"; +static const char __pyx_k_base[] = "base"; +static const char __pyx_k_data[] = "data"; +static const char __pyx_k_date[] = "__date__"; +static const char __pyx_k_main[] = "__main__"; +static const char __pyx_k_mode[] = "mode"; +static const char __pyx_k_name[] = "name"; +static const char __pyx_k_ndim[] = "ndim"; +static const char __pyx_k_pack[] = "pack"; +static const char __pyx_k_size[] = "size"; +static const char __pyx_k_step[] = "step"; +static const char __pyx_k_stop[] = "stop"; +static const char __pyx_k_test[] = "__test__"; +static const char __pyx_k_ASCII[] = "ASCII"; +static const char __pyx_k_MODES[] = "MODES"; +static const char __pyx_k_array[] = "array"; +static const char __pyx_k_check[] = "check"; +static const char __pyx_k_class[] = "__class__"; +static const char __pyx_k_dtype[] = "dtype"; +static const char __pyx_k_error[] = "error"; +static const char __pyx_k_flags[] = "flags"; +static const char __pyx_k_image[] = "image"; +static const char __pyx_k_index[] = "index"; +static const char __pyx_k_int16[] = "int16"; +static const char __pyx_k_int32[] = "int32"; +static const char __pyx_k_int64[] = "int64"; +static const char __pyx_k_numpy[] = "numpy"; +static const char __pyx_k_range[] = "range"; +static const char __pyx_k_shape[] = "shape"; +static const char __pyx_k_start[] = "start"; +static const char __pyx_k_encode[] = "encode"; +static const char __pyx_k_format[] = "format"; +static const char __pyx_k_import[] = "__import__"; +static const char __pyx_k_mirror[] = "mirror"; +static const char __pyx_k_name_2[] = "__name__"; +static const char __pyx_k_shrink[] = "shrink"; +static const char __pyx_k_struct[] = "struct"; +static const char __pyx_k_uint16[] = "uint16"; +static const char __pyx_k_uint32[] = "uint32"; +static const char __pyx_k_uint64[] = "uint64"; +static const char __pyx_k_unpack[] = "unpack"; +static const char __pyx_k_H_Payno[] = "H. Payno"; +static const char __pyx_k_authors[] = "__authors__"; +static const char __pyx_k_float32[] = "float32"; +static const char __pyx_k_float64[] = "float64"; +static const char __pyx_k_fortran[] = "fortran"; +static const char __pyx_k_ker_dim[] = "ker_dim"; +static const char __pyx_k_license[] = "__license__"; +static const char __pyx_k_medfilt[] = "medfilt"; +static const char __pyx_k_memview[] = "memview"; +static const char __pyx_k_nearest[] = "nearest"; +static const char __pyx_k_reflect[] = "reflect"; +static const char __pyx_k_reshape[] = "reshape"; +static const char __pyx_k_Ellipsis[] = "Ellipsis"; +static const char __pyx_k_itemsize[] = "itemsize"; +static const char __pyx_k_reshaped[] = "reshaped"; +static const char __pyx_k_J_Kieffer[] = "J. Kieffer"; +static const char __pyx_k_TypeError[] = "TypeError"; +static const char __pyx_k_enumerate[] = "enumerate"; +static const char __pyx_k_image_dim[] = "image_dim"; +static const char __pyx_k_medfilt1d[] = "medfilt1d"; +static const char __pyx_k_medfilt2d[] = "medfilt2d"; +static const char __pyx_k_02_05_2017[] = "02/05/2017"; +static const char __pyx_k_IndexError[] = "IndexError"; +static const char __pyx_k_ValueError[] = "ValueError"; +static const char __pyx_k_length_max[] = "length_max"; +static const char __pyx_k_pyx_vtable[] = "__pyx_vtable__"; +static const char __pyx_k_zeros_like[] = "zeros_like"; +static const char __pyx_k_ImportError[] = "ImportError"; +static const char __pyx_k_MemoryError[] = "MemoryError"; +static const char __pyx_k_conditional[] = "conditional"; +static const char __pyx_k_kernel_size[] = "kernel_size"; +static const char __pyx_k_medfilterfc[] = "medfilterfc"; +static const char __pyx_k_C_CONTIGUOUS[] = "C_CONTIGUOUS"; +static const char __pyx_k_RuntimeError[] = "RuntimeError"; +static const char __pyx_k_buffer_shape[] = "buffer_shape"; +static const char __pyx_k_input_buffer[] = "input_buffer"; +static const char __pyx_k_output_buffer[] = "output_buffer"; +static const char __pyx_k_pyx_getbuffer[] = "__pyx_getbuffer"; +static const char __pyx_k_allocate_buffer[] = "allocate_buffer"; +static const char __pyx_k_dtype_is_object[] = "dtype_is_object"; +static const char __pyx_k_strided_and_direct[] = "<strided and direct>"; +static const char __pyx_k_median_filter_int16[] = "_median_filter_int16"; +static const char __pyx_k_median_filter_int32[] = "_median_filter_int32"; +static const char __pyx_k_median_filter_int64[] = "_median_filter_int64"; +static const char __pyx_k_median_filter_uint16[] = "_median_filter_uint16"; +static const char __pyx_k_median_filter_uint32[] = "_median_filter_uint32"; +static const char __pyx_k_median_filter_uint64[] = "_median_filter_uint64"; +static const char __pyx_k_strided_and_indirect[] = "<strided and indirect>"; +static const char __pyx_k_contiguous_and_direct[] = "<contiguous and direct>"; +static const char __pyx_k_median_filter_float32[] = "_median_filter_float32"; +static const char __pyx_k_median_filter_float64[] = "_median_filter_float64"; +static const char __pyx_k_MemoryView_of_r_object[] = "<MemoryView of %r object>"; +static const char __pyx_k_MemoryView_of_r_at_0x_x[] = "<MemoryView of %r at 0x%x>"; +static const char __pyx_k_contiguous_and_indirect[] = "<contiguous and indirect>"; +static const char __pyx_k_Cannot_index_with_type_s[] = "Cannot index with type '%s'"; +static const char __pyx_k_Invalid_shape_in_axis_d_d[] = "Invalid shape in axis %d: %d."; +static const char __pyx_k_itemsize_0_for_cython_array[] = "itemsize <= 0 for cython.array"; +static const char __pyx_k_ndarray_is_not_C_contiguous[] = "ndarray is not C contiguous"; +static const char __pyx_k_Requested_mode_s_is_unknowed[] = "Requested mode %s is unknowed."; +static const char __pyx_k_unable_to_allocate_array_data[] = "unable to allocate array data."; +static const char __pyx_k_input_buffer_dimension_must_mo[] = "<input_buffer> dimension must mo higher than 2."; +static const char __pyx_k_strided_and_direct_or_indirect[] = "<strided and direct or indirect>"; +static const char __pyx_k_Invalid_data_shape_Dimemsion_of[] = "Invalid data shape. Dimemsion of the arary should be 1 or 2"; +static const char __pyx_k_input_buffer_must_be_a_C_CONTIG[] = "<input_buffer> must be a C_CONTIGUOUS numpy array."; +static const char __pyx_k_numpy_core_multiarray_failed_to[] = "numpy.core.multiarray failed to import"; +static const char __pyx_k_output_buffer_dimension_must_mo[] = "<output_buffer> dimension must mo higher than 2."; +static const char __pyx_k_output_buffer_must_be_a_C_CONTI[] = "<output_buffer> must be a C_CONTIGUOUS numpy array."; +static const char __pyx_k_s_type_is_not_managed_by_the_me[] = "%s type is not managed by the median filter"; +static const char __pyx_k_unknown_dtype_code_in_numpy_pxd[] = "unknown dtype code in numpy.pxd (%d)"; +static const char __pyx_k_users_kieffer_workspace_400_rel[] = "/users/kieffer/workspace-400/release/silx/silx/math/medianfilter/medianfilter.pyx"; +static const char __pyx_k_Buffer_view_does_not_expose_stri[] = "Buffer view does not expose strides"; +static const char __pyx_k_Can_only_create_a_buffer_that_is[] = "Can only create a buffer that is contiguous in memory."; +static const char __pyx_k_Empty_shape_tuple_for_cython_arr[] = "Empty shape tuple for cython.array"; +static const char __pyx_k_Format_string_allocated_too_shor[] = "Format string allocated too short, see comment in numpy.pxd"; +static const char __pyx_k_Indirect_dimensions_not_supporte[] = "Indirect dimensions not supported"; +static const char __pyx_k_Invalid_mode_expected_c_or_fortr[] = "Invalid mode, expected 'c' or 'fortran', got %s"; +static const char __pyx_k_Non_native_byte_order_not_suppor[] = "Non-native byte order not supported"; +static const char __pyx_k_Out_of_bounds_on_buffer_access_a[] = "Out of bounds on buffer access (axis %d)"; +static const char __pyx_k_This_module_provides_median_filt[] = "This module provides median filter function for 1D and 2D arrays.\n"; +static const char __pyx_k_Unable_to_convert_item_to_object[] = "Unable to convert item to object"; +static const char __pyx_k_got_differing_extents_in_dimensi[] = "got differing extents in dimension %d (got %d and %d)"; +static const char __pyx_k_input_buffer_and_output_buffer_m[] = "input buffer and output_buffer must be of the same type"; +static const char __pyx_k_ndarray_is_not_Fortran_contiguou[] = "ndarray is not Fortran contiguous"; +static const char __pyx_k_numpy_core_umath_failed_to_impor[] = "numpy.core.umath failed to import"; +static const char __pyx_k_silx_math_medianfilter_medianfil[] = "silx.math.medianfilter.medianfilter"; +static const char __pyx_k_unable_to_allocate_shape_and_str[] = "unable to allocate shape and strides."; +static const char __pyx_k_Format_string_allocated_too_shor_2[] = "Format string allocated too short."; +static const char __pyx_k_input_buffer_and_output_buffer_m_2[] = "input buffer and output_buffer must be of the same dimension and same dimension"; static PyObject *__pyx_kp_s_02_05_2017; +static PyObject *__pyx_n_s_ASCII; static PyObject *__pyx_kp_s_Buffer_view_does_not_expose_stri; static PyObject *__pyx_n_s_C_CONTIGUOUS; static PyObject *__pyx_kp_s_Can_only_create_a_buffer_that_is; @@ -1724,6 +2107,7 @@ static PyObject *__pyx_kp_s_Empty_shape_tuple_for_cython_arr; static PyObject *__pyx_kp_u_Format_string_allocated_too_shor; static PyObject *__pyx_kp_u_Format_string_allocated_too_shor_2; static PyObject *__pyx_kp_s_H_Payno; +static PyObject *__pyx_n_s_ImportError; static PyObject *__pyx_n_s_IndexError; static PyObject *__pyx_kp_s_Indirect_dimensions_not_supporte; static PyObject *__pyx_kp_s_Invalid_data_shape_Dimemsion_of; @@ -1731,12 +2115,14 @@ static PyObject *__pyx_kp_s_Invalid_mode_expected_c_or_fortr; static PyObject *__pyx_kp_s_Invalid_shape_in_axis_d_d; static PyObject *__pyx_kp_s_J_Kieffer; static PyObject *__pyx_n_s_MIT; +static PyObject *__pyx_n_s_MODES; static PyObject *__pyx_n_s_MemoryError; static PyObject *__pyx_kp_s_MemoryView_of_r_at_0x_x; static PyObject *__pyx_kp_s_MemoryView_of_r_object; static PyObject *__pyx_kp_u_Non_native_byte_order_not_suppor; static PyObject *__pyx_n_b_O; static PyObject *__pyx_kp_s_Out_of_bounds_on_buffer_access_a; +static PyObject *__pyx_kp_s_Requested_mode_s_is_unknowed; static PyObject *__pyx_n_s_RuntimeError; static PyObject *__pyx_n_s_TypeError; static PyObject *__pyx_kp_s_Unable_to_convert_item_to_object; @@ -1757,7 +2143,9 @@ static PyObject *__pyx_n_s_data; static PyObject *__pyx_n_s_date; static PyObject *__pyx_n_s_dtype; static PyObject *__pyx_n_s_dtype_is_object; +static PyObject *__pyx_n_s_encode; static PyObject *__pyx_n_s_enumerate; +static PyObject *__pyx_n_s_err; static PyObject *__pyx_n_s_error; static PyObject *__pyx_n_s_flags; static PyObject *__pyx_n_s_float32; @@ -1770,6 +2158,7 @@ static PyObject *__pyx_n_s_id; static PyObject *__pyx_n_s_image; static PyObject *__pyx_n_s_image_dim; static PyObject *__pyx_n_s_import; +static PyObject *__pyx_n_s_index; static PyObject *__pyx_n_s_input_buffer; static PyObject *__pyx_kp_s_input_buffer_and_output_buffer_m; static PyObject *__pyx_kp_s_input_buffer_and_output_buffer_m_2; @@ -1782,6 +2171,7 @@ static PyObject *__pyx_n_s_itemsize; static PyObject *__pyx_kp_s_itemsize_0_for_cython_array; static PyObject *__pyx_n_s_ker_dim; static PyObject *__pyx_n_s_kernel_size; +static PyObject *__pyx_n_s_length_max; static PyObject *__pyx_n_s_license; static PyObject *__pyx_n_s_main; static PyObject *__pyx_n_s_medfilt; @@ -1797,13 +2187,17 @@ static PyObject *__pyx_n_s_median_filter_uint16; static PyObject *__pyx_n_s_median_filter_uint32; static PyObject *__pyx_n_s_median_filter_uint64; static PyObject *__pyx_n_s_memview; +static PyObject *__pyx_n_s_mirror; static PyObject *__pyx_n_s_mode; static PyObject *__pyx_n_s_name; static PyObject *__pyx_n_s_name_2; static PyObject *__pyx_kp_u_ndarray_is_not_C_contiguous; static PyObject *__pyx_kp_u_ndarray_is_not_Fortran_contiguou; static PyObject *__pyx_n_s_ndim; +static PyObject *__pyx_n_s_nearest; static PyObject *__pyx_n_s_numpy; +static PyObject *__pyx_kp_s_numpy_core_multiarray_failed_to; +static PyObject *__pyx_kp_s_numpy_core_umath_failed_to_impor; static PyObject *__pyx_n_s_obj; static PyObject *__pyx_n_s_output_buffer; static PyObject *__pyx_kp_s_output_buffer_dimension_must_mo; @@ -1812,10 +2206,12 @@ static PyObject *__pyx_n_s_pack; static PyObject *__pyx_n_s_pyx_getbuffer; static PyObject *__pyx_n_s_pyx_vtable; static PyObject *__pyx_n_s_range; +static PyObject *__pyx_n_s_reflect; static PyObject *__pyx_n_s_reshape; static PyObject *__pyx_n_s_reshaped; static PyObject *__pyx_kp_s_s_type_is_not_managed_by_the_me; static PyObject *__pyx_n_s_shape; +static PyObject *__pyx_n_s_shrink; static PyObject *__pyx_n_s_silx_math_medianfilter_medianfil; static PyObject *__pyx_n_s_size; static PyObject *__pyx_n_s_start; @@ -1833,12 +2229,64 @@ static PyObject *__pyx_kp_s_unable_to_allocate_array_data; static PyObject *__pyx_kp_s_unable_to_allocate_shape_and_str; static PyObject *__pyx_kp_u_unknown_dtype_code_in_numpy_pxd; static PyObject *__pyx_n_s_unpack; -static PyObject *__pyx_kp_s_users_payno_Documents_dev_esrf; -static PyObject *__pyx_n_s_x; -static PyObject *__pyx_n_s_xrange; +static PyObject *__pyx_kp_s_users_kieffer_workspace_400_rel; +static PyObject *__pyx_n_s_y; static PyObject *__pyx_n_s_zeros_like; +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_medfilt1d(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_data, PyObject *__pyx_v_kernel_size, bool __pyx_v_conditional, PyObject *__pyx_v_mode); /* proto */ +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_2medfilt2d(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_image, PyObject *__pyx_v_kernel_size, bool __pyx_v_conditional, PyObject *__pyx_v_mode); /* proto */ +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_4medfilt(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_data, PyObject *__pyx_v_kernel_size, bool __pyx_v_conditional, PyObject *__pyx_v_mode); /* proto */ +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_6check(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_input_buffer, PyObject *__pyx_v_output_buffer); /* proto */ +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_8reflect(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_index, int __pyx_v_length_max); /* proto */ +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_10mirror(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_index, int __pyx_v_length_max); /* proto */ +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_12_median_filter_float32(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional, int __pyx_v_mode); /* proto */ +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_14_median_filter_float64(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional, int __pyx_v_mode); /* proto */ +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_16_median_filter_int64(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional, int __pyx_v_mode); /* proto */ +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_18_median_filter_uint64(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional, int __pyx_v_mode); /* proto */ +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_20_median_filter_int32(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional, int __pyx_v_mode); /* proto */ +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_22_median_filter_uint32(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional, int __pyx_v_mode); /* proto */ +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_24_median_filter_int16(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional, int __pyx_v_mode); /* proto */ +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_26_median_filter_uint16(CYTHON_UNUSED PyObject *__pyx_self, PyArrayObject *__pyx_v_input_buffer, PyArrayObject *__pyx_v_output_buffer, PyArrayObject *__pyx_v_kernel_size, bool __pyx_v_conditional, int __pyx_v_mode); /* proto */ +static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /* proto */ +static void __pyx_pf_5numpy_7ndarray_2__releasebuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info); /* proto */ +static int __pyx_array___pyx_pf_15View_dot_MemoryView_5array___cinit__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_shape, Py_ssize_t __pyx_v_itemsize, PyObject *__pyx_v_format, PyObject *__pyx_v_mode, int __pyx_v_allocate_buffer); /* proto */ +static int __pyx_array___pyx_pf_15View_dot_MemoryView_5array_2__getbuffer__(struct __pyx_array_obj *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /* proto */ +static void __pyx_array___pyx_pf_15View_dot_MemoryView_5array_4__dealloc__(struct __pyx_array_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_5array_7memview___get__(struct __pyx_array_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_array___pyx_pf_15View_dot_MemoryView_5array_6__getattr__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_attr); /* proto */ +static PyObject *__pyx_array___pyx_pf_15View_dot_MemoryView_5array_8__getitem__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_item); /* proto */ +static int __pyx_array___pyx_pf_15View_dot_MemoryView_5array_10__setitem__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_item, PyObject *__pyx_v_value); /* proto */ +static int __pyx_MemviewEnum___pyx_pf_15View_dot_MemoryView_4Enum___init__(struct __pyx_MemviewEnum_obj *__pyx_v_self, PyObject *__pyx_v_name); /* proto */ +static PyObject *__pyx_MemviewEnum___pyx_pf_15View_dot_MemoryView_4Enum_2__repr__(struct __pyx_MemviewEnum_obj *__pyx_v_self); /* proto */ +static int __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview___cinit__(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_obj, int __pyx_v_flags, int __pyx_v_dtype_is_object); /* proto */ +static void __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_2__dealloc__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_4__getitem__(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_index); /* proto */ +static int __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_6__setitem__(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_index, PyObject *__pyx_v_value); /* proto */ +static int __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_8__getbuffer__(struct __pyx_memoryview_obj *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_10memoryview_1T___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_10memoryview_4base___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_10memoryview_5shape___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_10memoryview_7strides___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_10memoryview_10suboffsets___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_10memoryview_4ndim___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_10memoryview_8itemsize___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_10memoryview_6nbytes___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_10memoryview_4size___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static Py_ssize_t __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_10__len__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_12__repr__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_14__str__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_16is_c_contig(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_18is_f_contig(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_20copy(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_22copy_fortran(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static void __pyx_memoryviewslice___pyx_pf_15View_dot_MemoryView_16_memoryviewslice___dealloc__(struct __pyx_memoryviewslice_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_16_memoryviewslice_4base___get__(struct __pyx_memoryviewslice_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_tp_new_array(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ +static PyObject *__pyx_tp_new_Enum(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ +static PyObject *__pyx_tp_new_memoryview(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ +static PyObject *__pyx_tp_new__memoryviewslice(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_int_0; static PyObject *__pyx_int_1; +static PyObject *__pyx_int_2; static PyObject *__pyx_int_3; static PyObject *__pyx_int_neg_1; static PyObject *__pyx_tuple_; @@ -1850,9 +2298,9 @@ static PyObject *__pyx_tuple__6; static PyObject *__pyx_tuple__7; static PyObject *__pyx_tuple__8; static PyObject *__pyx_tuple__9; -static PyObject *__pyx_slice__21; -static PyObject *__pyx_slice__22; -static PyObject *__pyx_slice__23; +static PyObject *__pyx_slice__26; +static PyObject *__pyx_slice__27; +static PyObject *__pyx_slice__28; static PyObject *__pyx_tuple__10; static PyObject *__pyx_tuple__11; static PyObject *__pyx_tuple__12; @@ -1864,67 +2312,76 @@ static PyObject *__pyx_tuple__17; static PyObject *__pyx_tuple__18; static PyObject *__pyx_tuple__19; static PyObject *__pyx_tuple__20; +static PyObject *__pyx_tuple__21; +static PyObject *__pyx_tuple__22; +static PyObject *__pyx_tuple__23; static PyObject *__pyx_tuple__24; static PyObject *__pyx_tuple__25; -static PyObject *__pyx_tuple__27; static PyObject *__pyx_tuple__29; -static PyObject *__pyx_tuple__31; -static PyObject *__pyx_tuple__33; -static PyObject *__pyx_tuple__35; -static PyObject *__pyx_tuple__37; -static PyObject *__pyx_tuple__39; -static PyObject *__pyx_tuple__41; -static PyObject *__pyx_tuple__43; -static PyObject *__pyx_tuple__45; -static PyObject *__pyx_tuple__47; -static PyObject *__pyx_tuple__49; +static PyObject *__pyx_tuple__30; +static PyObject *__pyx_tuple__32; +static PyObject *__pyx_tuple__34; +static PyObject *__pyx_tuple__36; +static PyObject *__pyx_tuple__38; +static PyObject *__pyx_tuple__40; +static PyObject *__pyx_tuple__42; +static PyObject *__pyx_tuple__44; +static PyObject *__pyx_tuple__46; +static PyObject *__pyx_tuple__48; static PyObject *__pyx_tuple__50; -static PyObject *__pyx_tuple__51; static PyObject *__pyx_tuple__52; -static PyObject *__pyx_tuple__53; -static PyObject *__pyx_codeobj__26; -static PyObject *__pyx_codeobj__28; -static PyObject *__pyx_codeobj__30; -static PyObject *__pyx_codeobj__32; -static PyObject *__pyx_codeobj__34; -static PyObject *__pyx_codeobj__36; -static PyObject *__pyx_codeobj__38; -static PyObject *__pyx_codeobj__40; -static PyObject *__pyx_codeobj__42; -static PyObject *__pyx_codeobj__44; -static PyObject *__pyx_codeobj__46; -static PyObject *__pyx_codeobj__48; - -/* "silx/math/medianfilter/medianfilter.pyx":46 - * - * - * def medfilt1d(data, kernel_size=3, bool conditional=False): # <<<<<<<<<<<<<< +static PyObject *__pyx_tuple__54; +static PyObject *__pyx_tuple__56; +static PyObject *__pyx_tuple__58; +static PyObject *__pyx_tuple__59; +static PyObject *__pyx_tuple__60; +static PyObject *__pyx_tuple__61; +static PyObject *__pyx_tuple__62; +static PyObject *__pyx_codeobj__31; +static PyObject *__pyx_codeobj__33; +static PyObject *__pyx_codeobj__35; +static PyObject *__pyx_codeobj__37; +static PyObject *__pyx_codeobj__39; +static PyObject *__pyx_codeobj__41; +static PyObject *__pyx_codeobj__43; +static PyObject *__pyx_codeobj__45; +static PyObject *__pyx_codeobj__47; +static PyObject *__pyx_codeobj__49; +static PyObject *__pyx_codeobj__51; +static PyObject *__pyx_codeobj__53; +static PyObject *__pyx_codeobj__55; +static PyObject *__pyx_codeobj__57; + +/* "silx/math/medianfilter/medianfilter.pyx":48 + * + * + * def medfilt1d(data, kernel_size=3, bool conditional=False, mode='nearest'): # <<<<<<<<<<<<<< * """Function computing the median filter of the given input. * Behavior at boundaries: the algorithm is reducing the size of the */ /* Python wrapper */ static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_1medfilt1d(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/ -static char __pyx_doc_4silx_4math_12medianfilter_12medianfilter_medfilt1d[] = "medfilt1d(data, kernel_size=3, bool conditional=False)\nFunction computing the median filter of the given input.\n Behavior at boundaries: the algorithm is reducing the size of the\n window/kernel for pixels at boundaries (there is no mirroring).\n\n :param numpy.ndarray data: the array for which we want to apply\n the median filter. Should be 1d.\n :param kernel_size: the dimension of the kernel.\n :type kernel_size: int\n :param bool conditional: True if we want to apply a conditional median\n filtering.\n\n :returns: the array with the median value for each pixel.\n "; +static char __pyx_doc_4silx_4math_12medianfilter_12medianfilter_medfilt1d[] = "medfilt1d(data, kernel_size=3, bool conditional=False, mode='nearest')\nFunction computing the median filter of the given input.\n Behavior at boundaries: the algorithm is reducing the size of the\n window/kernel for pixels at boundaries (there is no mirroring).\n\n :param numpy.ndarray data: the array for which we want to apply\n the median filter. Should be 1d.\n :param kernel_size: the dimension of the kernel.\n :type kernel_size: int\n :param bool conditional: True if we want to apply a conditional median\n filtering.\n\n :returns: the array with the median value for each pixel.\n "; static PyMethodDef __pyx_mdef_4silx_4math_12medianfilter_12medianfilter_1medfilt1d = {"medfilt1d", (PyCFunction)__pyx_pw_4silx_4math_12medianfilter_12medianfilter_1medfilt1d, METH_VARARGS|METH_KEYWORDS, __pyx_doc_4silx_4math_12medianfilter_12medianfilter_medfilt1d}; static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_1medfilt1d(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) { PyObject *__pyx_v_data = 0; PyObject *__pyx_v_kernel_size = 0; bool __pyx_v_conditional; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; + PyObject *__pyx_v_mode = 0; PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("medfilt1d (wrapper)", 0); { - static PyObject **__pyx_pyargnames[] = {&__pyx_n_s_data,&__pyx_n_s_kernel_size,&__pyx_n_s_conditional,0}; - PyObject* values[3] = {0,0,0}; + static PyObject **__pyx_pyargnames[] = {&__pyx_n_s_data,&__pyx_n_s_kernel_size,&__pyx_n_s_conditional,&__pyx_n_s_mode,0}; + PyObject* values[4] = {0,0,0,0}; values[1] = ((PyObject *)__pyx_int_3); + values[3] = ((PyObject *)__pyx_n_s_nearest); if (unlikely(__pyx_kwds)) { Py_ssize_t kw_args; const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args); switch (pos_args) { + case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3); case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2); case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1); case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0); @@ -1946,12 +2403,18 @@ static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_1medfilt1d(P PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_conditional); if (value) { values[2] = value; kw_args--; } } + case 3: + if (kw_args > 0) { + PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_mode); + if (value) { values[3] = value; kw_args--; } + } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "medfilt1d") < 0)) {__pyx_filename = __pyx_f[0]; 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__pyx_v_kernel_size, __pyx_v_conditional); + __pyx_r = __pyx_pf_4silx_4math_12medianfilter_12medianfilter_12_median_filter_float32(__pyx_self, __pyx_v_input_buffer, __pyx_v_output_buffer, __pyx_v_kernel_size, __pyx_v_conditional, __pyx_v_mode); /* function exit code */ goto __pyx_L0; @@ -3587,8 +4634,8 @@ static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_9_median_fil return __pyx_r; } -static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_8_median_filter_float32(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional) { - int __pyx_v_x; +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_12_median_filter_float32(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional, int __pyx_v_mode) { + int __pyx_v_y; int __pyx_v_image_dim; int __pyx_v_buffer_shape[2]; PyObject *__pyx_r = NULL; @@ -3603,25 +4650,25 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_8_median_fil Py_ssize_t __pyx_t_8; __Pyx_RefNannySetupContext("_median_filter_float32", 0); - /* "silx/math/medianfilter/medianfilter.pyx":179 + /* "silx/math/medianfilter/medianfilter.pyx":215 * * cdef: - * int x = 0 # <<<<<<<<<<<<<< + * int y = 0 # <<<<<<<<<<<<<< * int image_dim = input_buffer.shape[1] - 1 * int[2] buffer_shape */ - __pyx_v_x = 0; + __pyx_v_y = 0; - /* "silx/math/medianfilter/medianfilter.pyx":180 + /* "silx/math/medianfilter/medianfilter.pyx":216 * cdef: - * int x = 0 + * int y = 0 * int image_dim = input_buffer.shape[1] - 1 # <<<<<<<<<<<<<< * int[2] buffer_shape * buffer_shape[0] = input_buffer.shape[0] */ __pyx_v_image_dim = ((__pyx_v_input_buffer.shape[1]) - 1); - /* "silx/math/medianfilter/medianfilter.pyx":182 + /* "silx/math/medianfilter/medianfilter.pyx":218 * int image_dim 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prange(input_buffer.shape[0], nogil=True): + * for y in prange(input_buffer.shape[0], nogil=True): * median_filter.median_filter[float](<float*> & input_buffer[0,0], # <<<<<<<<<<<<<< * <float*> & output_buffer[0,0], * <int*>& kernel_size[0], @@ -3685,8 +4732,8 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_8_median_fil __pyx_t_4 = 0; __pyx_t_5 = 0; - /* "silx/math/medianfilter/medianfilter.pyx":187 - * for x in prange(input_buffer.shape[0], nogil=True): + /* "silx/math/medianfilter/medianfilter.pyx":223 + * for y in prange(input_buffer.shape[0], nogil=True): * median_filter.median_filter[float](<float*> & input_buffer[0,0], * <float*> & output_buffer[0,0], # <<<<<<<<<<<<<< * <int*>& kernel_size[0], @@ -3695,23 +4742,23 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_8_median_fil __pyx_t_6 = 0; __pyx_t_7 = 0; - /* "silx/math/medianfilter/medianfilter.pyx":188 + /* "silx/math/medianfilter/medianfilter.pyx":224 * 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} case 3: if (likely((values[3] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_conditional)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("_median_filter_float64", 1, 4, 4, 3); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 200; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("_median_filter_float64", 1, 5, 5, 3); __PYX_ERR(0, 237, __pyx_L3_error) + } + case 4: + if (likely((values[4] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_mode)) != 0)) kw_args--; + else { + __Pyx_RaiseArgtupleInvalid("_median_filter_float64", 1, 5, 5, 4); __PYX_ERR(0, 237, __pyx_L3_error) } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "_median_filter_float64") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 200; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "_median_filter_float64") < 0)) __PYX_ERR(0, 237, 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PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "input_buffer"); __PYX_ERR(0, 237, __pyx_L1_error) } if (unlikely(((PyObject *)__pyx_v_output_buffer.memview) == Py_None)) { - PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "output_buffer"); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 201; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "output_buffer"); __PYX_ERR(0, 238, __pyx_L1_error) } if (unlikely(((PyObject *)__pyx_v_kernel_size.memview) == Py_None)) { - PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "kernel_size"); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 202; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "kernel_size"); __PYX_ERR(0, 239, __pyx_L1_error) } - __pyx_r = __pyx_pf_4silx_4math_12medianfilter_12medianfilter_10_median_filter_float64(__pyx_self, __pyx_v_input_buffer, __pyx_v_output_buffer, __pyx_v_kernel_size, __pyx_v_conditional); + __pyx_r = __pyx_pf_4silx_4math_12medianfilter_12medianfilter_14_median_filter_float64(__pyx_self, __pyx_v_input_buffer, __pyx_v_output_buffer, __pyx_v_kernel_size, __pyx_v_conditional, __pyx_v_mode); /* function exit code */ goto __pyx_L0; @@ -3863,8 +4916,8 @@ static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_11_median_fi return __pyx_r; } -static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_10_median_filter_float64(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional) { - int __pyx_v_x; +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_14_median_filter_float64(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional, int __pyx_v_mode) { + int __pyx_v_y; int __pyx_v_image_dim; int __pyx_v_buffer_shape[2]; PyObject *__pyx_r = NULL; @@ -3879,25 +4932,25 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_10_median_fi Py_ssize_t __pyx_t_8; __Pyx_RefNannySetupContext("_median_filter_float64", 0); - /* "silx/math/medianfilter/medianfilter.pyx":206 + /* "silx/math/medianfilter/medianfilter.pyx":244 * * cdef: - * int x = 0 # <<<<<<<<<<<<<< + * int y = 0 # <<<<<<<<<<<<<< * int image_dim = input_buffer.shape[1] - 1 * int[2] buffer_shape */ - __pyx_v_x = 0; + __pyx_v_y = 0; - /* "silx/math/medianfilter/medianfilter.pyx":207 + /* "silx/math/medianfilter/medianfilter.pyx":245 * cdef: - * int x = 0 + * int y = 0 * int image_dim = input_buffer.shape[1] - 1 # <<<<<<<<<<<<<< * int[2] buffer_shape * buffer_shape[0] = input_buffer.shape[0] */ __pyx_v_image_dim = ((__pyx_v_input_buffer.shape[1]) - 1); - /* "silx/math/medianfilter/medianfilter.pyx":209 + /* "silx/math/medianfilter/medianfilter.pyx":247 * int image_dim = input_buffer.shape[1] - 1 * int[2] buffer_shape * buffer_shape[0] = input_buffer.shape[0] # <<<<<<<<<<<<<< @@ -3906,19 +4959,19 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_10_median_fi */ (__pyx_v_buffer_shape[0]) = (__pyx_v_input_buffer.shape[0]); - /* "silx/math/medianfilter/medianfilter.pyx":210 + /* "silx/math/medianfilter/medianfilter.pyx":248 * int[2] buffer_shape * buffer_shape[0] = input_buffer.shape[0] * buffer_shape[1] = input_buffer.shape[1] # <<<<<<<<<<<<<< * - * for x in prange(input_buffer.shape[0], nogil=True): + * for y in prange(input_buffer.shape[0], nogil=True): */ (__pyx_v_buffer_shape[1]) = (__pyx_v_input_buffer.shape[1]); - /* "silx/math/medianfilter/medianfilter.pyx":212 + /* "silx/math/medianfilter/medianfilter.pyx":250 * buffer_shape[1] = input_buffer.shape[1] * - * for x in prange(input_buffer.shape[0], nogil=True): # <<<<<<<<<<<<<< + * for y in 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__Pyx_RaiseArgtupleInvalid("_median_filter_int64", 1, 5, 5, 2); __PYX_ERR(0, 266, __pyx_L3_error) } case 3: if (likely((values[3] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_conditional)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("_median_filter_int64", 1, 4, 4, 3); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 227; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("_median_filter_int64", 1, 5, 5, 3); __PYX_ERR(0, 266, __pyx_L3_error) + } + case 4: + if (likely((values[4] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_mode)) != 0)) kw_args--; + else { + __Pyx_RaiseArgtupleInvalid("_median_filter_int64", 1, 5, 5, 4); __PYX_ERR(0, 266, __pyx_L3_error) } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "_median_filter_int64") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 227; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, 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not be None", "kernel_size"); __PYX_ERR(0, 268, __pyx_L1_error) } - __pyx_r = __pyx_pf_4silx_4math_12medianfilter_12medianfilter_12_median_filter_int64(__pyx_self, __pyx_v_input_buffer, __pyx_v_output_buffer, __pyx_v_kernel_size, __pyx_v_conditional); + __pyx_r = __pyx_pf_4silx_4math_12medianfilter_12medianfilter_16_median_filter_int64(__pyx_self, __pyx_v_input_buffer, __pyx_v_output_buffer, __pyx_v_kernel_size, __pyx_v_conditional, __pyx_v_mode); /* function exit code */ goto __pyx_L0; @@ -4139,8 +5198,8 @@ static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_13_median_fi return __pyx_r; } -static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_12_median_filter_int64(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional) { - int __pyx_v_x; +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_16_median_filter_int64(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional, int __pyx_v_mode) { + int __pyx_v_y; int __pyx_v_image_dim; int __pyx_v_buffer_shape[2]; PyObject *__pyx_r = NULL; @@ -4155,25 +5214,25 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_12_median_fi Py_ssize_t __pyx_t_8; __Pyx_RefNannySetupContext("_median_filter_int64", 0); - /* "silx/math/medianfilter/medianfilter.pyx":233 + /* "silx/math/medianfilter/medianfilter.pyx":273 * * cdef: - * int x = 0 # <<<<<<<<<<<<<< + * int y = 0 # <<<<<<<<<<<<<< * int image_dim = input_buffer.shape[1] - 1 * int[2] buffer_shape */ - __pyx_v_x = 0; + __pyx_v_y = 0; - /* "silx/math/medianfilter/medianfilter.pyx":234 + /* "silx/math/medianfilter/medianfilter.pyx":274 * cdef: - * int x = 0 + * int y = 0 * int image_dim = input_buffer.shape[1] - 1 # <<<<<<<<<<<<<< * int[2] buffer_shape * buffer_shape[0] = input_buffer.shape[0] */ __pyx_v_image_dim = ((__pyx_v_input_buffer.shape[1]) - 1); - /* "silx/math/medianfilter/medianfilter.pyx":236 + /* "silx/math/medianfilter/medianfilter.pyx":276 * int image_dim = input_buffer.shape[1] - 1 * int[2] buffer_shape * buffer_shape[0] = input_buffer.shape[0] # <<<<<<<<<<<<<< @@ -4182,19 +5241,19 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_12_median_fi */ (__pyx_v_buffer_shape[0]) = (__pyx_v_input_buffer.shape[0]); - /* "silx/math/medianfilter/medianfilter.pyx":237 + /* "silx/math/medianfilter/medianfilter.pyx":277 * int[2] buffer_shape * buffer_shape[0] = input_buffer.shape[0] * buffer_shape[1] = input_buffer.shape[1] # <<<<<<<<<<<<<< * - * for x in prange(input_buffer.shape[0], nogil=True): + * for y in prange(input_buffer.shape[0], nogil=True): */ (__pyx_v_buffer_shape[1]) = (__pyx_v_input_buffer.shape[1]); - /* "silx/math/medianfilter/medianfilter.pyx":239 + /* "silx/math/medianfilter/medianfilter.pyx":279 * buffer_shape[1] = input_buffer.shape[1] * - * for x in prange(input_buffer.shape[0], nogil=True): # <<<<<<<<<<<<<< + * for y in prange(input_buffer.shape[0], nogil=True): # <<<<<<<<<<<<<< * median_filter.median_filter[long](<long*> & input_buffer[0,0], * <long*> & output_buffer[0, 0], */ @@ -4213,23 +5272,23 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_12_median_fi #define likely(x) (x) #define unlikely(x) (x) #endif - __pyx_t_3 = (__pyx_t_1 - 0) / 1; + __pyx_t_3 = (__pyx_t_1 - 0 + 1 - 1/abs(1)) / 1; if (__pyx_t_3 > 0) { #ifdef _OPENMP - #pragma omp parallel private(__pyx_t_4, __pyx_t_7, __pyx_t_8, __pyx_t_5, __pyx_t_6) + #pragma omp parallel private(__pyx_t_4, __pyx_t_5, __pyx_t_6, __pyx_t_7, __pyx_t_8) #endif /* _OPENMP */ { #ifdef _OPENMP - #pragma omp for firstprivate(__pyx_v_x) lastprivate(__pyx_v_x) + #pragma omp for firstprivate(__pyx_v_y) lastprivate(__pyx_v_y) #endif /* _OPENMP */ for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_3; __pyx_t_2++){ { - __pyx_v_x = 0 + 1 * __pyx_t_2; + __pyx_v_y = (int)(0 + 1 * __pyx_t_2); - /* "silx/math/medianfilter/medianfilter.pyx":240 + /* "silx/math/medianfilter/medianfilter.pyx":280 * - * for x in prange(input_buffer.shape[0], nogil=True): + * for y in prange(input_buffer.shape[0], nogil=True): * median_filter.median_filter[long](<long*> & input_buffer[0,0], # <<<<<<<<<<<<<< * <long*> & output_buffer[0, 0], * <int*>&kernel_size[0], @@ -4237,8 +5296,8 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_12_median_fi __pyx_t_4 = 0; __pyx_t_5 = 0; - /* "silx/math/medianfilter/medianfilter.pyx":241 - * for x in prange(input_buffer.shape[0], nogil=True): + /* "silx/math/medianfilter/medianfilter.pyx":281 + * for y in prange(input_buffer.shape[0], nogil=True): * median_filter.median_filter[long](<long*> & input_buffer[0,0], * <long*> & output_buffer[0, 0], # <<<<<<<<<<<<<< * 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__pyx_v_input_buffer.strides[0]) )) + __pyx_t_5)) ))))), ((long *)(&(*((__pyx_t_5numpy_int64_t *) ( /* dim=1 */ ((char *) (((__pyx_t_5numpy_int64_t *) ( /* dim=0 */ (__pyx_v_output_buffer.data + __pyx_t_6 * __pyx_v_output_buffer.strides[0]) )) + __pyx_t_7)) ))))), ((int *)(&(*((__pyx_t_5numpy_int32_t *) ( /* dim=0 */ ((char *) (((__pyx_t_5numpy_int32_t *) __pyx_v_kernel_size.data) + __pyx_t_8)) ))))), ((int *)__pyx_v_buffer_shape), __pyx_v_x, 0, __pyx_v_image_dim, __pyx_v_conditional); + median_filter<long>(((long *)(&(*((__pyx_t_5numpy_int64_t *) ( /* dim=1 */ ((char *) (((__pyx_t_5numpy_int64_t *) ( /* dim=0 */ (__pyx_v_input_buffer.data + __pyx_t_4 * __pyx_v_input_buffer.strides[0]) )) + __pyx_t_5)) ))))), ((long *)(&(*((__pyx_t_5numpy_int64_t *) ( /* dim=1 */ ((char *) (((__pyx_t_5numpy_int64_t *) ( /* dim=0 */ (__pyx_v_output_buffer.data + __pyx_t_6 * __pyx_v_output_buffer.strides[0]) )) + __pyx_t_7)) ))))), ((int *)(&(*((__pyx_t_5numpy_int32_t *) ( /* dim=0 */ ((char *) 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(PyCFunction)__pyx_pw_4silx_4math_12medianfilter_12medianfilter_19_median_filter_uint64, METH_VARARGS|METH_KEYWORDS, __pyx_doc_4silx_4math_12medianfilter_12medianfilter_18_median_filter_uint64}; +static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_19_median_filter_uint64(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) { __Pyx_memviewslice __pyx_v_input_buffer = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_memviewslice __pyx_v_output_buffer = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_memviewslice __pyx_v_kernel_size = { 0, 0, { 0 }, { 0 }, { 0 } }; bool __pyx_v_conditional; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; + int __pyx_v_mode; PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("_median_filter_uint64 (wrapper)", 0); { - static PyObject **__pyx_pyargnames[] = {&__pyx_n_s_input_buffer,&__pyx_n_s_output_buffer,&__pyx_n_s_kernel_size,&__pyx_n_s_conditional,0}; - PyObject* values[4] = {0,0,0,0}; + static PyObject **__pyx_pyargnames[] = {&__pyx_n_s_input_buffer,&__pyx_n_s_output_buffer,&__pyx_n_s_kernel_size,&__pyx_n_s_conditional,&__pyx_n_s_mode,0}; + PyObject* values[5] = {0,0,0,0,0}; if (unlikely(__pyx_kwds)) { Py_ssize_t kw_args; const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args); switch (pos_args) { + case 5: values[4] = PyTuple_GET_ITEM(__pyx_args, 4); case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3); case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2); case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1); @@ -4358,53 +5416,60 @@ static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_15_median_fi case 1: if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_output_buffer)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("_median_filter_uint64", 1, 4, 4, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 253; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("_median_filter_uint64", 1, 5, 5, 1); __PYX_ERR(0, 294, 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(unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "_median_filter_uint64") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 253; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "_median_filter_uint64") < 0)) __PYX_ERR(0, 294, __pyx_L3_error) } - } else if (PyTuple_GET_SIZE(__pyx_args) != 4) { + } else if (PyTuple_GET_SIZE(__pyx_args) != 5) { goto __pyx_L5_argtuple_error; } else { values[0] = PyTuple_GET_ITEM(__pyx_args, 0); values[1] = PyTuple_GET_ITEM(__pyx_args, 1); values[2] = PyTuple_GET_ITEM(__pyx_args, 2); values[3] = PyTuple_GET_ITEM(__pyx_args, 3); + values[4] = PyTuple_GET_ITEM(__pyx_args, 4); } - __pyx_v_input_buffer = __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_uint64_t(values[0]); if (unlikely(!__pyx_v_input_buffer.memview)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 254; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_output_buffer = __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_uint64_t(values[1]); if (unlikely(!__pyx_v_output_buffer.memview)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 255; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_kernel_size = __Pyx_PyObject_to_MemoryviewSlice_dc_nn___pyx_t_5numpy_int32_t(values[2]); if (unlikely(!__pyx_v_kernel_size.memview)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 256; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_conditional = __Pyx_PyObject_IsTrue(values[3]); if (unlikely((__pyx_v_conditional == (bool)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 257; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_input_buffer = __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_uint64_t(values[0]); if (unlikely(!__pyx_v_input_buffer.memview)) __PYX_ERR(0, 295, __pyx_L3_error) + __pyx_v_output_buffer = 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__PYX_ERR(0, 294, __pyx_L3_error) __pyx_L3_error:; __Pyx_AddTraceback("silx.math.medianfilter.medianfilter._median_filter_uint64", __pyx_clineno, __pyx_lineno, __pyx_filename); __Pyx_RefNannyFinishContext(); return NULL; __pyx_L4_argument_unpacking_done:; if (unlikely(((PyObject *)__pyx_v_input_buffer.memview) == Py_None)) { - PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "input_buffer"); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 254; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "input_buffer"); __PYX_ERR(0, 295, __pyx_L1_error) } if (unlikely(((PyObject *)__pyx_v_output_buffer.memview) == Py_None)) { - PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "output_buffer"); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 255; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "output_buffer"); __PYX_ERR(0, 296, __pyx_L1_error) } if (unlikely(((PyObject *)__pyx_v_kernel_size.memview) == Py_None)) { - PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "kernel_size"); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 256; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "kernel_size"); __PYX_ERR(0, 297, __pyx_L1_error) } - __pyx_r = __pyx_pf_4silx_4math_12medianfilter_12medianfilter_14_median_filter_uint64(__pyx_self, __pyx_v_input_buffer, __pyx_v_output_buffer, __pyx_v_kernel_size, __pyx_v_conditional); + __pyx_r = __pyx_pf_4silx_4math_12medianfilter_12medianfilter_18_median_filter_uint64(__pyx_self, __pyx_v_input_buffer, __pyx_v_output_buffer, __pyx_v_kernel_size, __pyx_v_conditional, __pyx_v_mode); /* function exit code */ goto __pyx_L0; @@ -4415,8 +5480,8 @@ static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_15_median_fi return __pyx_r; } -static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_14_median_filter_uint64(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional) { - int __pyx_v_x; +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_18_median_filter_uint64(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional, int __pyx_v_mode) { + int __pyx_v_y; int __pyx_v_image_dim; int __pyx_v_buffer_shape[2]; PyObject *__pyx_r = NULL; @@ -4431,25 +5496,25 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_14_median_fi Py_ssize_t __pyx_t_8; __Pyx_RefNannySetupContext("_median_filter_uint64", 0); - /* "silx/math/medianfilter/medianfilter.pyx":260 + /* "silx/math/medianfilter/medianfilter.pyx":302 * * cdef: - * int x = 0 # <<<<<<<<<<<<<< + * int y = 0 # <<<<<<<<<<<<<< * int image_dim = input_buffer.shape[1] - 1 * int[2] buffer_shape */ - __pyx_v_x = 0; + __pyx_v_y = 0; - /* "silx/math/medianfilter/medianfilter.pyx":261 + /* "silx/math/medianfilter/medianfilter.pyx":303 * cdef: - * int x = 0 + * int y = 0 * int image_dim = input_buffer.shape[1] - 1 # <<<<<<<<<<<<<< * int[2] buffer_shape * buffer_shape[0] = input_buffer.shape[0] */ __pyx_v_image_dim = ((__pyx_v_input_buffer.shape[1]) - 1); - /* "silx/math/medianfilter/medianfilter.pyx":263 + /* "silx/math/medianfilter/medianfilter.pyx":305 * int image_dim = input_buffer.shape[1] - 1 * int[2] buffer_shape * buffer_shape[0] = input_buffer.shape[0] # <<<<<<<<<<<<<< @@ -4458,19 +5523,19 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_14_median_fi */ (__pyx_v_buffer_shape[0]) = (__pyx_v_input_buffer.shape[0]); - /* "silx/math/medianfilter/medianfilter.pyx":264 + /* "silx/math/medianfilter/medianfilter.pyx":306 * int[2] buffer_shape * buffer_shape[0] = input_buffer.shape[0] * buffer_shape[1] = input_buffer.shape[1] # <<<<<<<<<<<<<< * - * for x in prange(input_buffer.shape[0], nogil=True): + * for y in prange(input_buffer.shape[0], nogil=True): */ (__pyx_v_buffer_shape[1]) = (__pyx_v_input_buffer.shape[1]); - /* "silx/math/medianfilter/medianfilter.pyx":266 + /* "silx/math/medianfilter/medianfilter.pyx":308 * buffer_shape[1] = input_buffer.shape[1] * - * for x in prange(input_buffer.shape[0], nogil=True): # <<<<<<<<<<<<<< + * for y in prange(input_buffer.shape[0], nogil=True): # <<<<<<<<<<<<<< * median_filter.median_filter[uint64](<uint64*> & input_buffer[0,0], * <uint64*> & output_buffer[0, 0], */ @@ -4489,23 +5554,23 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_14_median_fi #define likely(x) (x) #define unlikely(x) (x) #endif - __pyx_t_3 = (__pyx_t_1 - 0) / 1; + __pyx_t_3 = (__pyx_t_1 - 0 + 1 - 1/abs(1)) / 1; if (__pyx_t_3 > 0) { #ifdef _OPENMP - #pragma omp parallel private(__pyx_t_4, __pyx_t_7, __pyx_t_8, __pyx_t_5, __pyx_t_6) + #pragma omp parallel private(__pyx_t_4, __pyx_t_5, __pyx_t_6, __pyx_t_7, __pyx_t_8) #endif /* _OPENMP */ { #ifdef _OPENMP - #pragma omp for firstprivate(__pyx_v_x) lastprivate(__pyx_v_x) + #pragma omp for firstprivate(__pyx_v_y) lastprivate(__pyx_v_y) #endif /* _OPENMP */ for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_3; __pyx_t_2++){ { - __pyx_v_x = 0 + 1 * __pyx_t_2; + __pyx_v_y = (int)(0 + 1 * __pyx_t_2); - /* "silx/math/medianfilter/medianfilter.pyx":267 + /* "silx/math/medianfilter/medianfilter.pyx":309 * - * for x in prange(input_buffer.shape[0], nogil=True): + * for y in prange(input_buffer.shape[0], nogil=True): * median_filter.median_filter[uint64](<uint64*> & input_buffer[0,0], # <<<<<<<<<<<<<< * <uint64*> & output_buffer[0, 0], * <int*>&kernel_size[0], @@ -4513,8 +5578,8 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_14_median_fi __pyx_t_4 = 0; __pyx_t_5 = 0; - /* "silx/math/medianfilter/medianfilter.pyx":268 - * for x in prange(input_buffer.shape[0], nogil=True): + /* "silx/math/medianfilter/medianfilter.pyx":310 + * for y in prange(input_buffer.shape[0], nogil=True): * median_filter.median_filter[uint64](<uint64*> & input_buffer[0,0], * <uint64*> & output_buffer[0, 0], # <<<<<<<<<<<<<< * <int*>&kernel_size[0], @@ -4523,23 +5588,23 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_14_median_fi __pyx_t_6 = 0; __pyx_t_7 = 0; - /* "silx/math/medianfilter/medianfilter.pyx":269 + /* "silx/math/medianfilter/medianfilter.pyx":311 * median_filter.median_filter[uint64](<uint64*> & input_buffer[0,0], * <uint64*> & output_buffer[0, 0], * <int*>&kernel_size[0], # <<<<<<<<<<<<<< * <int*>buffer_shape, - * x, + * y, */ __pyx_t_8 = 0; - /* "silx/math/medianfilter/medianfilter.pyx":267 + /* "silx/math/medianfilter/medianfilter.pyx":309 * - * for x in prange(input_buffer.shape[0], nogil=True): + * for y in prange(input_buffer.shape[0], nogil=True): * median_filter.median_filter[uint64](<uint64*> & input_buffer[0,0], # <<<<<<<<<<<<<< * <uint64*> & output_buffer[0, 0], * <int*>&kernel_size[0], */ - median_filter<__pyx_t_4silx_4math_12medianfilter_12medianfilter_uint64>(((__pyx_t_4silx_4math_12medianfilter_12medianfilter_uint64 *)(&(*((__pyx_t_5numpy_uint64_t *) ( /* dim=1 */ ((char *) (((__pyx_t_5numpy_uint64_t *) ( /* dim=0 */ (__pyx_v_input_buffer.data + __pyx_t_4 * __pyx_v_input_buffer.strides[0]) )) + __pyx_t_5)) ))))), ((__pyx_t_4silx_4math_12medianfilter_12medianfilter_uint64 *)(&(*((__pyx_t_5numpy_uint64_t *) ( /* dim=1 */ ((char *) (((__pyx_t_5numpy_uint64_t *) ( /* dim=0 */ (__pyx_v_output_buffer.data + __pyx_t_6 * __pyx_v_output_buffer.strides[0]) )) + __pyx_t_7)) ))))), ((int *)(&(*((__pyx_t_5numpy_int32_t *) ( /* dim=0 */ ((char *) (((__pyx_t_5numpy_int32_t *) __pyx_v_kernel_size.data) + __pyx_t_8)) ))))), ((int *)__pyx_v_buffer_shape), __pyx_v_x, 0, __pyx_v_image_dim, __pyx_v_conditional); + median_filter<__pyx_t_4silx_4math_12medianfilter_12medianfilter_uint64>(((__pyx_t_4silx_4math_12medianfilter_12medianfilter_uint64 *)(&(*((__pyx_t_5numpy_uint64_t *) ( /* dim=1 */ ((char *) (((__pyx_t_5numpy_uint64_t *) ( /* dim=0 */ (__pyx_v_input_buffer.data + __pyx_t_4 * __pyx_v_input_buffer.strides[0]) )) + __pyx_t_5)) ))))), ((__pyx_t_4silx_4math_12medianfilter_12medianfilter_uint64 *)(&(*((__pyx_t_5numpy_uint64_t *) ( /* dim=1 */ ((char *) (((__pyx_t_5numpy_uint64_t *) ( /* dim=0 */ (__pyx_v_output_buffer.data + __pyx_t_6 * __pyx_v_output_buffer.strides[0]) )) + __pyx_t_7)) ))))), ((int *)(&(*((__pyx_t_5numpy_int32_t *) ( /* dim=0 */ ((char *) (((__pyx_t_5numpy_int32_t *) __pyx_v_kernel_size.data) + __pyx_t_8)) ))))), ((int *)__pyx_v_buffer_shape), __pyx_v_y, 0, __pyx_v_image_dim, __pyx_v_conditional, __pyx_v_mode); } } } @@ -4553,10 +5618,10 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_14_median_fi #endif } - /* 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*__pyx_pw_4silx_4math_12medianfilter_12medianfilter_17_median_filter_int32(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) { +static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_21_median_filter_int32(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/ +static char __pyx_doc_4silx_4math_12medianfilter_12medianfilter_20_median_filter_int32[] = "_median_filter_int32(__Pyx_memviewslice input_buffer, __Pyx_memviewslice output_buffer, __Pyx_memviewslice kernel_size, bool conditional, int mode)"; +static PyMethodDef __pyx_mdef_4silx_4math_12medianfilter_12medianfilter_21_median_filter_int32 = {"_median_filter_int32", (PyCFunction)__pyx_pw_4silx_4math_12medianfilter_12medianfilter_21_median_filter_int32, METH_VARARGS|METH_KEYWORDS, __pyx_doc_4silx_4math_12medianfilter_12medianfilter_20_median_filter_int32}; +static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_21_median_filter_int32(PyObject *__pyx_self, PyObject 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__Pyx_RaiseArgtupleInvalid("_median_filter_int32", 1, 5, 5, 2); __PYX_ERR(0, 324, __pyx_L3_error) } case 3: if (likely((values[3] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_conditional)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("_median_filter_int32", 1, 4, 4, 3); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 281; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("_median_filter_int32", 1, 5, 5, 3); __PYX_ERR(0, 324, __pyx_L3_error) + } + case 4: + if (likely((values[4] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_mode)) != 0)) kw_args--; + else { + __Pyx_RaiseArgtupleInvalid("_median_filter_int32", 1, 5, 5, 4); __PYX_ERR(0, 324, __pyx_L3_error) } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "_median_filter_int32") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 281; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, 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PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "input_buffer"); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 281; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "input_buffer"); __PYX_ERR(0, 324, __pyx_L1_error) } if (unlikely(((PyObject *)__pyx_v_output_buffer.memview) == Py_None)) { - PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "output_buffer"); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 282; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "output_buffer"); __PYX_ERR(0, 325, __pyx_L1_error) } if (unlikely(((PyObject *)__pyx_v_kernel_size.memview) == Py_None)) { - PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "kernel_size"); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 283; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "kernel_size"); __PYX_ERR(0, 326, __pyx_L1_error) } - __pyx_r = __pyx_pf_4silx_4math_12medianfilter_12medianfilter_16_median_filter_int32(__pyx_self, __pyx_v_input_buffer, __pyx_v_output_buffer, __pyx_v_kernel_size, __pyx_v_conditional); + __pyx_r = __pyx_pf_4silx_4math_12medianfilter_12medianfilter_20_median_filter_int32(__pyx_self, __pyx_v_input_buffer, __pyx_v_output_buffer, __pyx_v_kernel_size, __pyx_v_conditional, __pyx_v_mode); /* function exit code */ goto __pyx_L0; @@ -4691,8 +5762,8 @@ static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_17_median_fi return __pyx_r; } -static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_16_median_filter_int32(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional) { - int __pyx_v_x; +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_20_median_filter_int32(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional, int __pyx_v_mode) { + int __pyx_v_y; int __pyx_v_image_dim; int __pyx_v_buffer_shape[2]; PyObject *__pyx_r = NULL; @@ -4707,25 +5778,25 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_16_median_fi Py_ssize_t __pyx_t_8; __Pyx_RefNannySetupContext("_median_filter_int32", 0); - /* "silx/math/medianfilter/medianfilter.pyx":287 + /* "silx/math/medianfilter/medianfilter.pyx":331 * * cdef: - * int x = 0 # <<<<<<<<<<<<<< + * int y = 0 # <<<<<<<<<<<<<< * int image_dim = input_buffer.shape[1] - 1 * int[2] buffer_shape */ - __pyx_v_x = 0; + __pyx_v_y = 0; - /* "silx/math/medianfilter/medianfilter.pyx":288 + /* "silx/math/medianfilter/medianfilter.pyx":332 * cdef: - * int x = 0 + * int y = 0 * int image_dim = input_buffer.shape[1] - 1 # <<<<<<<<<<<<<< * int[2] buffer_shape * buffer_shape[0] = input_buffer.shape[0] */ __pyx_v_image_dim = ((__pyx_v_input_buffer.shape[1]) - 1); - /* "silx/math/medianfilter/medianfilter.pyx":290 + /* "silx/math/medianfilter/medianfilter.pyx":334 * int image_dim = input_buffer.shape[1] - 1 * int[2] buffer_shape * buffer_shape[0] = input_buffer.shape[0] # <<<<<<<<<<<<<< @@ -4734,19 +5805,19 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_16_median_fi */ (__pyx_v_buffer_shape[0]) = (__pyx_v_input_buffer.shape[0]); - /* "silx/math/medianfilter/medianfilter.pyx":291 + /* "silx/math/medianfilter/medianfilter.pyx":335 * int[2] buffer_shape * buffer_shape[0] = input_buffer.shape[0] * buffer_shape[1] = input_buffer.shape[1] # <<<<<<<<<<<<<< * - * for x in prange(input_buffer.shape[0], nogil=True): + * for y in prange(input_buffer.shape[0], nogil=True): */ (__pyx_v_buffer_shape[1]) = (__pyx_v_input_buffer.shape[1]); - /* "silx/math/medianfilter/medianfilter.pyx":293 + /* "silx/math/medianfilter/medianfilter.pyx":337 * buffer_shape[1] = input_buffer.shape[1] * - * for x in prange(input_buffer.shape[0], nogil=True): # <<<<<<<<<<<<<< + * for y in prange(input_buffer.shape[0], nogil=True): # <<<<<<<<<<<<<< * median_filter.median_filter[int](<int*> & input_buffer[0,0], * <int*> & output_buffer[0, 0], */ @@ -4765,23 +5836,23 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_16_median_fi #define likely(x) (x) #define unlikely(x) (x) #endif - __pyx_t_3 = (__pyx_t_1 - 0) / 1; + __pyx_t_3 = (__pyx_t_1 - 0 + 1 - 1/abs(1)) / 1; if (__pyx_t_3 > 0) { #ifdef _OPENMP - #pragma omp parallel private(__pyx_t_4, __pyx_t_7, __pyx_t_8, __pyx_t_5, __pyx_t_6) + #pragma omp parallel private(__pyx_t_4, __pyx_t_5, __pyx_t_6, __pyx_t_7, __pyx_t_8) #endif /* _OPENMP */ { #ifdef _OPENMP - #pragma omp for firstprivate(__pyx_v_x) lastprivate(__pyx_v_x) + #pragma omp for firstprivate(__pyx_v_y) lastprivate(__pyx_v_y) #endif /* _OPENMP */ for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_3; __pyx_t_2++){ { - __pyx_v_x = 0 + 1 * __pyx_t_2; + __pyx_v_y = (int)(0 + 1 * __pyx_t_2); - /* "silx/math/medianfilter/medianfilter.pyx":294 + /* "silx/math/medianfilter/medianfilter.pyx":338 * - * for x in prange(input_buffer.shape[0], nogil=True): + * for y in prange(input_buffer.shape[0], nogil=True): * median_filter.median_filter[int](<int*> & input_buffer[0,0], # <<<<<<<<<<<<<< * <int*> & output_buffer[0, 0], * <int*>&kernel_size[0], @@ -4789,8 +5860,8 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_16_median_fi __pyx_t_4 = 0; __pyx_t_5 = 0; - /* "silx/math/medianfilter/medianfilter.pyx":295 - * for x in prange(input_buffer.shape[0], nogil=True): + /* "silx/math/medianfilter/medianfilter.pyx":339 + * for y in prange(input_buffer.shape[0], nogil=True): * median_filter.median_filter[int](<int*> & input_buffer[0,0], * <int*> & output_buffer[0, 0], # <<<<<<<<<<<<<< * <int*>&kernel_size[0], @@ -4799,23 +5870,23 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_16_median_fi __pyx_t_6 = 0; __pyx_t_7 = 0; - /* "silx/math/medianfilter/medianfilter.pyx":296 + /* "silx/math/medianfilter/medianfilter.pyx":340 * median_filter.median_filter[int](<int*> & input_buffer[0,0], * <int*> & output_buffer[0, 0], * <int*>&kernel_size[0], # <<<<<<<<<<<<<< * <int*>buffer_shape, - * x, + * y, */ __pyx_t_8 = 0; - /* "silx/math/medianfilter/medianfilter.pyx":294 + /* "silx/math/medianfilter/medianfilter.pyx":338 * - * for x in prange(input_buffer.shape[0], nogil=True): + * for y in prange(input_buffer.shape[0], nogil=True): * median_filter.median_filter[int](<int*> & input_buffer[0,0], # <<<<<<<<<<<<<< * <int*> & output_buffer[0, 0], * <int*>&kernel_size[0], */ - median_filter<int>(((int *)(&(*((__pyx_t_5numpy_int32_t *) ( /* dim=1 */ ((char *) (((__pyx_t_5numpy_int32_t *) ( /* dim=0 */ (__pyx_v_input_buffer.data + __pyx_t_4 * __pyx_v_input_buffer.strides[0]) )) + __pyx_t_5)) ))))), ((int *)(&(*((__pyx_t_5numpy_int32_t *) ( /* dim=1 */ ((char *) (((__pyx_t_5numpy_int32_t *) ( /* dim=0 */ (__pyx_v_output_buffer.data + __pyx_t_6 * __pyx_v_output_buffer.strides[0]) )) + __pyx_t_7)) ))))), ((int *)(&(*((__pyx_t_5numpy_int32_t *) ( /* dim=0 */ ((char *) (((__pyx_t_5numpy_int32_t *) __pyx_v_kernel_size.data) + __pyx_t_8)) ))))), ((int *)__pyx_v_buffer_shape), __pyx_v_x, 0, __pyx_v_image_dim, __pyx_v_conditional); + median_filter<int>(((int *)(&(*((__pyx_t_5numpy_int32_t *) ( /* dim=1 */ ((char *) (((__pyx_t_5numpy_int32_t *) ( /* dim=0 */ (__pyx_v_input_buffer.data + __pyx_t_4 * __pyx_v_input_buffer.strides[0]) )) + __pyx_t_5)) ))))), ((int *)(&(*((__pyx_t_5numpy_int32_t *) ( /* dim=1 */ ((char *) (((__pyx_t_5numpy_int32_t *) ( /* dim=0 */ (__pyx_v_output_buffer.data + __pyx_t_6 * __pyx_v_output_buffer.strides[0]) )) + __pyx_t_7)) ))))), ((int *)(&(*((__pyx_t_5numpy_int32_t *) ( /* dim=0 */ ((char *) (((__pyx_t_5numpy_int32_t *) __pyx_v_kernel_size.data) + __pyx_t_8)) ))))), ((int *)__pyx_v_buffer_shape), __pyx_v_y, 0, __pyx_v_image_dim, __pyx_v_conditional, __pyx_v_mode); } } } @@ -4829,10 +5900,10 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_16_median_fi #endif } - /* "silx/math/medianfilter/medianfilter.pyx":293 + /* "silx/math/medianfilter/medianfilter.pyx":337 * buffer_shape[1] = input_buffer.shape[1] * - * for x in prange(input_buffer.shape[0], nogil=True): # <<<<<<<<<<<<<< + * for y in prange(input_buffer.shape[0], nogil=True): # <<<<<<<<<<<<<< * median_filter.median_filter[int](<int*> & input_buffer[0,0], * <int*> & output_buffer[0, 0], */ @@ -4847,7 +5918,7 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_16_median_fi } } - /* "silx/math/medianfilter/medianfilter.pyx":281 + /* "silx/math/medianfilter/medianfilter.pyx":324 * @cython.wraparound(False) * @cython.initializedcheck(False) * def 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{"_median_filter_uint32", (PyCFunction)__pyx_pw_4silx_4math_12medianfilter_12medianfilter_23_median_filter_uint32, METH_VARARGS|METH_KEYWORDS, __pyx_doc_4silx_4math_12medianfilter_12medianfilter_22_median_filter_uint32}; +static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_23_median_filter_uint32(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) { __Pyx_memviewslice __pyx_v_input_buffer = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_memviewslice __pyx_v_output_buffer = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_memviewslice __pyx_v_kernel_size = { 0, 0, { 0 }, { 0 }, { 0 } }; bool __pyx_v_conditional; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; + int __pyx_v_mode; PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("_median_filter_uint32 (wrapper)", 0); { - static PyObject **__pyx_pyargnames[] = {&__pyx_n_s_input_buffer,&__pyx_n_s_output_buffer,&__pyx_n_s_kernel_size,&__pyx_n_s_conditional,0}; - PyObject* values[4] = {0,0,0,0}; + static PyObject **__pyx_pyargnames[] = {&__pyx_n_s_input_buffer,&__pyx_n_s_output_buffer,&__pyx_n_s_kernel_size,&__pyx_n_s_conditional,&__pyx_n_s_mode,0}; + PyObject* values[5] = {0,0,0,0,0}; if (unlikely(__pyx_kwds)) { Py_ssize_t kw_args; const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args); switch (pos_args) { + case 5: values[4] = PyTuple_GET_ITEM(__pyx_args, 4); case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3); case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2); case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1); @@ -4910,53 +5980,60 @@ static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_19_median_fi case 1: if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_output_buffer)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("_median_filter_uint32", 1, 4, 4, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 308; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("_median_filter_uint32", 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__pyx_L3_error) } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "_median_filter_uint32") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 308; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "_median_filter_uint32") < 0)) __PYX_ERR(0, 353, __pyx_L3_error) } - } else if (PyTuple_GET_SIZE(__pyx_args) != 4) { + } else if (PyTuple_GET_SIZE(__pyx_args) != 5) { goto __pyx_L5_argtuple_error; } else { values[0] = PyTuple_GET_ITEM(__pyx_args, 0); values[1] = PyTuple_GET_ITEM(__pyx_args, 1); values[2] = PyTuple_GET_ITEM(__pyx_args, 2); values[3] = PyTuple_GET_ITEM(__pyx_args, 3); + values[4] = PyTuple_GET_ITEM(__pyx_args, 4); } - __pyx_v_input_buffer = __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_uint32_t(values[0]); if (unlikely(!__pyx_v_input_buffer.memview)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 308; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_output_buffer = __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_uint32_t(values[1]); if (unlikely(!__pyx_v_output_buffer.memview)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 309; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_kernel_size = __Pyx_PyObject_to_MemoryviewSlice_dc_nn___pyx_t_5numpy_int32_t(values[2]); if (unlikely(!__pyx_v_kernel_size.memview)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 310; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_conditional = __Pyx_PyObject_IsTrue(values[3]); if (unlikely((__pyx_v_conditional == (bool)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 311; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_input_buffer = __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_uint32_t(values[0]); if (unlikely(!__pyx_v_input_buffer.memview)) __PYX_ERR(0, 353, __pyx_L3_error) + __pyx_v_output_buffer = 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__PYX_ERR(0, 353, __pyx_L3_error) __pyx_L3_error:; __Pyx_AddTraceback("silx.math.medianfilter.medianfilter._median_filter_uint32", __pyx_clineno, __pyx_lineno, __pyx_filename); __Pyx_RefNannyFinishContext(); return NULL; __pyx_L4_argument_unpacking_done:; if (unlikely(((PyObject *)__pyx_v_input_buffer.memview) == Py_None)) { - PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "input_buffer"); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 308; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "input_buffer"); __PYX_ERR(0, 353, __pyx_L1_error) } if (unlikely(((PyObject *)__pyx_v_output_buffer.memview) == Py_None)) { - PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "output_buffer"); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 309; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "output_buffer"); __PYX_ERR(0, 354, __pyx_L1_error) } if (unlikely(((PyObject *)__pyx_v_kernel_size.memview) == Py_None)) { - PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "kernel_size"); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 310; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "kernel_size"); __PYX_ERR(0, 355, __pyx_L1_error) } - __pyx_r = __pyx_pf_4silx_4math_12medianfilter_12medianfilter_18_median_filter_uint32(__pyx_self, __pyx_v_input_buffer, __pyx_v_output_buffer, __pyx_v_kernel_size, __pyx_v_conditional); + __pyx_r = __pyx_pf_4silx_4math_12medianfilter_12medianfilter_22_median_filter_uint32(__pyx_self, __pyx_v_input_buffer, __pyx_v_output_buffer, __pyx_v_kernel_size, __pyx_v_conditional, __pyx_v_mode); /* function exit code */ goto __pyx_L0; @@ -4967,8 +6044,8 @@ static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_19_median_fi return __pyx_r; } -static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_18_median_filter_uint32(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional) { - int __pyx_v_x; +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_22_median_filter_uint32(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional, int __pyx_v_mode) { + int __pyx_v_y; int __pyx_v_image_dim; int __pyx_v_buffer_shape[2]; PyObject *__pyx_r = NULL; @@ -4983,25 +6060,25 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_18_median_fi Py_ssize_t __pyx_t_8; __Pyx_RefNannySetupContext("_median_filter_uint32", 0); - /* "silx/math/medianfilter/medianfilter.pyx":314 + /* "silx/math/medianfilter/medianfilter.pyx":360 * * cdef: - * int x = 0 # <<<<<<<<<<<<<< + * int y = 0 # <<<<<<<<<<<<<< * int image_dim = input_buffer.shape[1] - 1 * int[2] buffer_shape */ - __pyx_v_x = 0; + __pyx_v_y = 0; - /* "silx/math/medianfilter/medianfilter.pyx":315 + /* "silx/math/medianfilter/medianfilter.pyx":361 * cdef: - * int x = 0 + * int y = 0 * int image_dim = input_buffer.shape[1] - 1 # <<<<<<<<<<<<<< * int[2] buffer_shape * buffer_shape[0] = input_buffer.shape[0] */ __pyx_v_image_dim = ((__pyx_v_input_buffer.shape[1]) - 1); - /* "silx/math/medianfilter/medianfilter.pyx":317 + /* "silx/math/medianfilter/medianfilter.pyx":363 * int image_dim = input_buffer.shape[1] - 1 * int[2] buffer_shape * buffer_shape[0] = input_buffer.shape[0] # <<<<<<<<<<<<<< @@ -5010,19 +6087,19 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_18_median_fi */ (__pyx_v_buffer_shape[0]) = (__pyx_v_input_buffer.shape[0]); - /* "silx/math/medianfilter/medianfilter.pyx":318 + /* "silx/math/medianfilter/medianfilter.pyx":364 * int[2] buffer_shape * buffer_shape[0] = input_buffer.shape[0] * buffer_shape[1] = input_buffer.shape[1] # <<<<<<<<<<<<<< * - * for x in prange(input_buffer.shape[0], nogil=True): + * for y in prange(input_buffer.shape[0], nogil=True): */ (__pyx_v_buffer_shape[1]) = (__pyx_v_input_buffer.shape[1]); - /* "silx/math/medianfilter/medianfilter.pyx":320 + /* "silx/math/medianfilter/medianfilter.pyx":366 * buffer_shape[1] = input_buffer.shape[1] * - * for x in prange(input_buffer.shape[0], nogil=True): # <<<<<<<<<<<<<< + * for y in prange(input_buffer.shape[0], nogil=True): # <<<<<<<<<<<<<< * median_filter.median_filter[uint32](<uint32*> & input_buffer[0,0], * <uint32*> & output_buffer[0, 0], */ @@ -5041,23 +6118,23 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_18_median_fi #define likely(x) (x) #define unlikely(x) (x) #endif - __pyx_t_3 = (__pyx_t_1 - 0) / 1; + __pyx_t_3 = (__pyx_t_1 - 0 + 1 - 1/abs(1)) / 1; if (__pyx_t_3 > 0) { #ifdef _OPENMP - #pragma omp parallel private(__pyx_t_4, __pyx_t_7, __pyx_t_8, __pyx_t_5, __pyx_t_6) + #pragma omp parallel private(__pyx_t_4, __pyx_t_5, __pyx_t_6, __pyx_t_7, __pyx_t_8) #endif /* _OPENMP */ { #ifdef _OPENMP - #pragma omp for firstprivate(__pyx_v_x) lastprivate(__pyx_v_x) + #pragma omp for firstprivate(__pyx_v_y) lastprivate(__pyx_v_y) #endif /* _OPENMP */ for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_3; __pyx_t_2++){ { - __pyx_v_x = 0 + 1 * __pyx_t_2; + __pyx_v_y = (int)(0 + 1 * __pyx_t_2); - /* "silx/math/medianfilter/medianfilter.pyx":321 + /* "silx/math/medianfilter/medianfilter.pyx":367 * - * for x in prange(input_buffer.shape[0], nogil=True): + * for y in prange(input_buffer.shape[0], nogil=True): * median_filter.median_filter[uint32](<uint32*> & input_buffer[0,0], # <<<<<<<<<<<<<< * <uint32*> & output_buffer[0, 0], * <int*>&kernel_size[0], @@ -5065,8 +6142,8 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_18_median_fi __pyx_t_4 = 0; __pyx_t_5 = 0; - /* "silx/math/medianfilter/medianfilter.pyx":322 - * for x in prange(input_buffer.shape[0], nogil=True): + /* "silx/math/medianfilter/medianfilter.pyx":368 + * for y in prange(input_buffer.shape[0], nogil=True): * median_filter.median_filter[uint32](<uint32*> & input_buffer[0,0], * <uint32*> & output_buffer[0, 0], # <<<<<<<<<<<<<< * <int*>&kernel_size[0], @@ -5075,23 +6152,23 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_18_median_fi __pyx_t_6 = 0; __pyx_t_7 = 0; - /* "silx/math/medianfilter/medianfilter.pyx":323 + /* "silx/math/medianfilter/medianfilter.pyx":369 * median_filter.median_filter[uint32](<uint32*> & input_buffer[0,0], * <uint32*> & output_buffer[0, 0], * <int*>&kernel_size[0], # <<<<<<<<<<<<<< * <int*>buffer_shape, - * x, + * y, */ __pyx_t_8 = 0; - /* "silx/math/medianfilter/medianfilter.pyx":321 + /* "silx/math/medianfilter/medianfilter.pyx":367 * - * for x in prange(input_buffer.shape[0], nogil=True): + * for y in prange(input_buffer.shape[0], nogil=True): * median_filter.median_filter[uint32](<uint32*> & input_buffer[0,0], # <<<<<<<<<<<<<< * <uint32*> & output_buffer[0, 0], * <int*>&kernel_size[0], */ - median_filter<__pyx_t_4silx_4math_12medianfilter_12medianfilter_uint32>(((__pyx_t_4silx_4math_12medianfilter_12medianfilter_uint32 *)(&(*((__pyx_t_5numpy_uint32_t *) ( /* dim=1 */ ((char *) (((__pyx_t_5numpy_uint32_t *) ( /* dim=0 */ (__pyx_v_input_buffer.data + __pyx_t_4 * __pyx_v_input_buffer.strides[0]) )) + __pyx_t_5)) ))))), ((__pyx_t_4silx_4math_12medianfilter_12medianfilter_uint32 *)(&(*((__pyx_t_5numpy_uint32_t *) ( /* dim=1 */ ((char *) (((__pyx_t_5numpy_uint32_t *) ( /* dim=0 */ (__pyx_v_output_buffer.data + __pyx_t_6 * __pyx_v_output_buffer.strides[0]) )) + __pyx_t_7)) ))))), ((int *)(&(*((__pyx_t_5numpy_int32_t *) ( /* dim=0 */ ((char *) (((__pyx_t_5numpy_int32_t *) __pyx_v_kernel_size.data) + __pyx_t_8)) ))))), ((int *)__pyx_v_buffer_shape), __pyx_v_x, 0, __pyx_v_image_dim, __pyx_v_conditional); + median_filter<__pyx_t_4silx_4math_12medianfilter_12medianfilter_uint32>(((__pyx_t_4silx_4math_12medianfilter_12medianfilter_uint32 *)(&(*((__pyx_t_5numpy_uint32_t *) ( /* dim=1 */ ((char *) (((__pyx_t_5numpy_uint32_t *) ( /* dim=0 */ (__pyx_v_input_buffer.data + __pyx_t_4 * __pyx_v_input_buffer.strides[0]) )) + __pyx_t_5)) ))))), ((__pyx_t_4silx_4math_12medianfilter_12medianfilter_uint32 *)(&(*((__pyx_t_5numpy_uint32_t *) ( /* dim=1 */ ((char *) (((__pyx_t_5numpy_uint32_t *) ( /* dim=0 */ (__pyx_v_output_buffer.data + __pyx_t_6 * __pyx_v_output_buffer.strides[0]) )) + __pyx_t_7)) ))))), ((int *)(&(*((__pyx_t_5numpy_int32_t *) ( /* dim=0 */ ((char *) (((__pyx_t_5numpy_int32_t *) __pyx_v_kernel_size.data) + __pyx_t_8)) ))))), ((int *)__pyx_v_buffer_shape), __pyx_v_y, 0, __pyx_v_image_dim, __pyx_v_conditional, __pyx_v_mode); } } } @@ -5105,10 +6182,10 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_18_median_fi #endif } - /* "silx/math/medianfilter/medianfilter.pyx":320 + /* "silx/math/medianfilter/medianfilter.pyx":366 * buffer_shape[1] = input_buffer.shape[1] * - * for x in prange(input_buffer.shape[0], nogil=True): # <<<<<<<<<<<<<< + * for y in prange(input_buffer.shape[0], nogil=True): # <<<<<<<<<<<<<< * median_filter.median_filter[uint32](<uint32*> & input_buffer[0,0], * <uint32*> & output_buffer[0, 0], */ @@ -5123,7 +6200,7 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_18_median_fi } } - /* "silx/math/medianfilter/medianfilter.pyx":308 + /* "silx/math/medianfilter/medianfilter.pyx":353 * @cython.wraparound(False) * @cython.initializedcheck(False) * def _median_filter_uint32(cnumpy.uint32_t[:, ::1] input_buffer not None, # <<<<<<<<<<<<<< @@ -5141,7 +6218,7 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_18_median_fi return __pyx_r; } -/* "silx/math/medianfilter/medianfilter.pyx":335 +/* "silx/math/medianfilter/medianfilter.pyx":382 * @cython.wraparound(False) * @cython.initializedcheck(False) * def _median_filter_int16(cnumpy.int16_t[:, ::1] input_buffer not None, # <<<<<<<<<<<<<< @@ -5150,27 +6227,26 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_18_median_fi */ /* Python wrapper */ -static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_21_median_filter_int16(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/ -static char __pyx_doc_4silx_4math_12medianfilter_12medianfilter_20_median_filter_int16[] = "_median_filter_int16(__Pyx_memviewslice input_buffer, __Pyx_memviewslice output_buffer, __Pyx_memviewslice kernel_size, bool conditional)"; -static PyMethodDef __pyx_mdef_4silx_4math_12medianfilter_12medianfilter_21_median_filter_int16 = {"_median_filter_int16", (PyCFunction)__pyx_pw_4silx_4math_12medianfilter_12medianfilter_21_median_filter_int16, METH_VARARGS|METH_KEYWORDS, __pyx_doc_4silx_4math_12medianfilter_12medianfilter_20_median_filter_int16}; -static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_21_median_filter_int16(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) { +static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_25_median_filter_int16(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/ +static char __pyx_doc_4silx_4math_12medianfilter_12medianfilter_24_median_filter_int16[] = "_median_filter_int16(__Pyx_memviewslice input_buffer, __Pyx_memviewslice output_buffer, __Pyx_memviewslice kernel_size, bool conditional, int mode)"; +static PyMethodDef __pyx_mdef_4silx_4math_12medianfilter_12medianfilter_25_median_filter_int16 = {"_median_filter_int16", (PyCFunction)__pyx_pw_4silx_4math_12medianfilter_12medianfilter_25_median_filter_int16, METH_VARARGS|METH_KEYWORDS, __pyx_doc_4silx_4math_12medianfilter_12medianfilter_24_median_filter_int16}; +static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_25_median_filter_int16(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) { __Pyx_memviewslice __pyx_v_input_buffer = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_memviewslice __pyx_v_output_buffer = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_memviewslice __pyx_v_kernel_size = { 0, 0, { 0 }, { 0 }, { 0 } }; bool __pyx_v_conditional; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; + int __pyx_v_mode; PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("_median_filter_int16 (wrapper)", 0); { - static PyObject **__pyx_pyargnames[] = {&__pyx_n_s_input_buffer,&__pyx_n_s_output_buffer,&__pyx_n_s_kernel_size,&__pyx_n_s_conditional,0}; - PyObject* values[4] = {0,0,0,0}; + static PyObject **__pyx_pyargnames[] = {&__pyx_n_s_input_buffer,&__pyx_n_s_output_buffer,&__pyx_n_s_kernel_size,&__pyx_n_s_conditional,&__pyx_n_s_mode,0}; + PyObject* values[5] = {0,0,0,0,0}; if (unlikely(__pyx_kwds)) { Py_ssize_t kw_args; const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args); switch (pos_args) { + case 5: values[4] = PyTuple_GET_ITEM(__pyx_args, 4); case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3); case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2); case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1); @@ -5186,53 +6262,60 @@ static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_21_median_fi case 1: if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_output_buffer)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("_median_filter_int16", 1, 4, 4, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("_median_filter_int16", 1, 5, 5, 1); __PYX_ERR(0, 382, __pyx_L3_error) } case 2: if (likely((values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_kernel_size)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("_median_filter_int16", 1, 4, 4, 2); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("_median_filter_int16", 1, 5, 5, 2); __PYX_ERR(0, 382, __pyx_L3_error) } case 3: if (likely((values[3] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_conditional)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("_median_filter_int16", 1, 4, 4, 3); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("_median_filter_int16", 1, 5, 5, 3); __PYX_ERR(0, 382, __pyx_L3_error) + } + case 4: + if (likely((values[4] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_mode)) != 0)) kw_args--; + else { + __Pyx_RaiseArgtupleInvalid("_median_filter_int16", 1, 5, 5, 4); __PYX_ERR(0, 382, __pyx_L3_error) } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "_median_filter_int16") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "_median_filter_int16") < 0)) __PYX_ERR(0, 382, __pyx_L3_error) } - } else if (PyTuple_GET_SIZE(__pyx_args) != 4) { + } else if (PyTuple_GET_SIZE(__pyx_args) != 5) { goto __pyx_L5_argtuple_error; } else { values[0] = PyTuple_GET_ITEM(__pyx_args, 0); values[1] = PyTuple_GET_ITEM(__pyx_args, 1); values[2] = PyTuple_GET_ITEM(__pyx_args, 2); values[3] = PyTuple_GET_ITEM(__pyx_args, 3); + values[4] = PyTuple_GET_ITEM(__pyx_args, 4); } - __pyx_v_input_buffer = __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_int16_t(values[0]); if (unlikely(!__pyx_v_input_buffer.memview)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_output_buffer = __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_int16_t(values[1]); if (unlikely(!__pyx_v_output_buffer.memview)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 336; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_kernel_size = __Pyx_PyObject_to_MemoryviewSlice_dc_nn___pyx_t_5numpy_int32_t(values[2]); if (unlikely(!__pyx_v_kernel_size.memview)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 337; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_conditional = __Pyx_PyObject_IsTrue(values[3]); if (unlikely((__pyx_v_conditional == (bool)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 338; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_input_buffer = __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_int16_t(values[0]); if (unlikely(!__pyx_v_input_buffer.memview)) __PYX_ERR(0, 382, __pyx_L3_error) + __pyx_v_output_buffer = __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_int16_t(values[1]); if (unlikely(!__pyx_v_output_buffer.memview)) __PYX_ERR(0, 383, __pyx_L3_error) + __pyx_v_kernel_size = __Pyx_PyObject_to_MemoryviewSlice_dc_nn___pyx_t_5numpy_int32_t(values[2]); if (unlikely(!__pyx_v_kernel_size.memview)) __PYX_ERR(0, 384, __pyx_L3_error) + __pyx_v_conditional = __Pyx_PyObject_IsTrue(values[3]); if (unlikely((__pyx_v_conditional == ((bool)-1)) && PyErr_Occurred())) __PYX_ERR(0, 385, __pyx_L3_error) + __pyx_v_mode = __Pyx_PyInt_As_int(values[4]); if (unlikely((__pyx_v_mode == (int)-1) && PyErr_Occurred())) __PYX_ERR(0, 386, __pyx_L3_error) } goto __pyx_L4_argument_unpacking_done; __pyx_L5_argtuple_error:; - __Pyx_RaiseArgtupleInvalid("_median_filter_int16", 1, 4, 4, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("_median_filter_int16", 1, 5, 5, PyTuple_GET_SIZE(__pyx_args)); __PYX_ERR(0, 382, __pyx_L3_error) __pyx_L3_error:; __Pyx_AddTraceback("silx.math.medianfilter.medianfilter._median_filter_int16", __pyx_clineno, __pyx_lineno, __pyx_filename); __Pyx_RefNannyFinishContext(); return NULL; __pyx_L4_argument_unpacking_done:; if (unlikely(((PyObject *)__pyx_v_input_buffer.memview) == Py_None)) { - PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "input_buffer"); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "input_buffer"); __PYX_ERR(0, 382, __pyx_L1_error) } if (unlikely(((PyObject *)__pyx_v_output_buffer.memview) == Py_None)) { - PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "output_buffer"); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 336; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "output_buffer"); __PYX_ERR(0, 383, __pyx_L1_error) } if (unlikely(((PyObject *)__pyx_v_kernel_size.memview) == Py_None)) { - PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "kernel_size"); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 337; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyErr_Format(PyExc_TypeError, "Argument '%.200s' must not be None", "kernel_size"); __PYX_ERR(0, 384, __pyx_L1_error) } - __pyx_r = __pyx_pf_4silx_4math_12medianfilter_12medianfilter_20_median_filter_int16(__pyx_self, __pyx_v_input_buffer, __pyx_v_output_buffer, __pyx_v_kernel_size, __pyx_v_conditional); + __pyx_r = __pyx_pf_4silx_4math_12medianfilter_12medianfilter_24_median_filter_int16(__pyx_self, __pyx_v_input_buffer, __pyx_v_output_buffer, __pyx_v_kernel_size, __pyx_v_conditional, __pyx_v_mode); /* function exit code */ goto __pyx_L0; @@ -5243,8 +6326,8 @@ static PyObject *__pyx_pw_4silx_4math_12medianfilter_12medianfilter_21_median_fi return __pyx_r; } -static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_20_median_filter_int16(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional) { - int __pyx_v_x; +static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_24_median_filter_int16(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_input_buffer, __Pyx_memviewslice __pyx_v_output_buffer, __Pyx_memviewslice __pyx_v_kernel_size, bool __pyx_v_conditional, int __pyx_v_mode) { + int __pyx_v_y; int __pyx_v_image_dim; int __pyx_v_buffer_shape[2]; PyObject *__pyx_r = NULL; @@ -5259,25 +6342,25 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_20_median_fi Py_ssize_t __pyx_t_8; __Pyx_RefNannySetupContext("_median_filter_int16", 0); - /* "silx/math/medianfilter/medianfilter.pyx":341 + /* "silx/math/medianfilter/medianfilter.pyx":389 * * cdef: - * int x = 0 # <<<<<<<<<<<<<< + * int y = 0 # <<<<<<<<<<<<<< * int image_dim = input_buffer.shape[1] - 1 * int[2] buffer_shape */ - __pyx_v_x = 0; + __pyx_v_y = 0; - /* "silx/math/medianfilter/medianfilter.pyx":342 + /* "silx/math/medianfilter/medianfilter.pyx":390 * cdef: - * int x = 0 + * int y = 0 * int image_dim = input_buffer.shape[1] - 1 # <<<<<<<<<<<<<< * int[2] buffer_shape * buffer_shape[0] = input_buffer.shape[0] */ __pyx_v_image_dim = ((__pyx_v_input_buffer.shape[1]) - 1); - /* "silx/math/medianfilter/medianfilter.pyx":344 + /* "silx/math/medianfilter/medianfilter.pyx":392 * int image_dim = input_buffer.shape[1] - 1 * int[2] buffer_shape * buffer_shape[0] = input_buffer.shape[0] # <<<<<<<<<<<<<< @@ -5286,19 +6369,19 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_20_median_fi */ (__pyx_v_buffer_shape[0]) = (__pyx_v_input_buffer.shape[0]); - /* "silx/math/medianfilter/medianfilter.pyx":345 + /* "silx/math/medianfilter/medianfilter.pyx":393 * int[2] buffer_shape * buffer_shape[0] = input_buffer.shape[0] * buffer_shape[1] = input_buffer.shape[1] # <<<<<<<<<<<<<< * - * for x in prange(input_buffer.shape[0], nogil=True): + * for y in prange(input_buffer.shape[0], nogil=True): */ (__pyx_v_buffer_shape[1]) = (__pyx_v_input_buffer.shape[1]); - /* "silx/math/medianfilter/medianfilter.pyx":347 + /* "silx/math/medianfilter/medianfilter.pyx":395 * buffer_shape[1] = input_buffer.shape[1] * - * for x in prange(input_buffer.shape[0], nogil=True): # <<<<<<<<<<<<<< + * for y in prange(input_buffer.shape[0], nogil=True): # <<<<<<<<<<<<<< * median_filter.median_filter[short](<short*> & input_buffer[0,0], * <short*> & output_buffer[0, 0], */ @@ -5317,23 +6400,23 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_20_median_fi #define likely(x) (x) #define unlikely(x) (x) #endif - __pyx_t_3 = (__pyx_t_1 - 0) / 1; + __pyx_t_3 = (__pyx_t_1 - 0 + 1 - 1/abs(1)) / 1; if (__pyx_t_3 > 0) { #ifdef _OPENMP - #pragma omp parallel private(__pyx_t_4, __pyx_t_7, __pyx_t_8, __pyx_t_5, __pyx_t_6) + #pragma omp parallel private(__pyx_t_4, __pyx_t_5, __pyx_t_6, __pyx_t_7, __pyx_t_8) #endif /* _OPENMP */ { #ifdef _OPENMP - #pragma omp for firstprivate(__pyx_v_x) lastprivate(__pyx_v_x) + #pragma omp for firstprivate(__pyx_v_y) lastprivate(__pyx_v_y) #endif /* _OPENMP */ for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_3; __pyx_t_2++){ { - __pyx_v_x = 0 + 1 * __pyx_t_2; + __pyx_v_y = (int)(0 + 1 * __pyx_t_2); - /* "silx/math/medianfilter/medianfilter.pyx":348 + /* "silx/math/medianfilter/medianfilter.pyx":396 * - * for x in prange(input_buffer.shape[0], nogil=True): + * for y in prange(input_buffer.shape[0], nogil=True): * median_filter.median_filter[short](<short*> & input_buffer[0,0], # <<<<<<<<<<<<<< * <short*> & output_buffer[0, 0], * <int*>&kernel_size[0], @@ -5341,8 +6424,8 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_20_median_fi __pyx_t_4 = 0; __pyx_t_5 = 0; - /* "silx/math/medianfilter/medianfilter.pyx":349 - * for x in prange(input_buffer.shape[0], nogil=True): + /* "silx/math/medianfilter/medianfilter.pyx":397 + * for y in prange(input_buffer.shape[0], nogil=True): * median_filter.median_filter[short](<short*> & input_buffer[0,0], * <short*> & output_buffer[0, 0], # <<<<<<<<<<<<<< * <int*>&kernel_size[0], @@ -5351,23 +6434,23 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_20_median_fi __pyx_t_6 = 0; __pyx_t_7 = 0; - /* "silx/math/medianfilter/medianfilter.pyx":350 + /* "silx/math/medianfilter/medianfilter.pyx":398 * median_filter.median_filter[short](<short*> & input_buffer[0,0], * <short*> & output_buffer[0, 0], * <int*>&kernel_size[0], # <<<<<<<<<<<<<< * <int*>buffer_shape, - * x, + * y, */ __pyx_t_8 = 0; - /* "silx/math/medianfilter/medianfilter.pyx":348 + /* "silx/math/medianfilter/medianfilter.pyx":396 * - * for x in prange(input_buffer.shape[0], nogil=True): + * for y in prange(input_buffer.shape[0], nogil=True): * median_filter.median_filter[short](<short*> & input_buffer[0,0], # <<<<<<<<<<<<<< * <short*> & output_buffer[0, 0], * <int*>&kernel_size[0], */ - median_filter<short>(((short *)(&(*((__pyx_t_5numpy_int16_t *) ( /* dim=1 */ ((char *) (((__pyx_t_5numpy_int16_t *) ( /* dim=0 */ (__pyx_v_input_buffer.data + __pyx_t_4 * 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prange(input_buffer.shape[0], nogil=True): # <<<<<<<<<<<<<< * median_filter.median_filter[uint16](<uint16*> & input_buffer[0, 0], * <uint16*> & output_buffer[0, 0], */ @@ -5623,23 +6709,23 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_22_median_fi #define likely(x) (x) #define unlikely(x) (x) #endif - __pyx_t_3 = (__pyx_t_1 - 0) / 1; + __pyx_t_3 = (__pyx_t_1 - 0 + 1 - 1/abs(1)) / 1; if (__pyx_t_3 > 0) { #ifdef _OPENMP - #pragma omp parallel private(__pyx_t_8, __pyx_t_5, __pyx_t_6, __pyx_t_4, __pyx_t_7) + #pragma omp parallel private(__pyx_t_4, __pyx_t_5, __pyx_t_6, __pyx_t_7, __pyx_t_8) #endif /* _OPENMP */ { #ifdef _OPENMP - #pragma omp for firstprivate(__pyx_v_x) lastprivate(__pyx_v_x) + #pragma omp for firstprivate(__pyx_v_y) lastprivate(__pyx_v_y) #endif /* _OPENMP */ for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_3; __pyx_t_2++){ { - __pyx_v_x = 0 + 1 * __pyx_t_2; + __pyx_v_y = (int)(0 + 1 * __pyx_t_2); - /* "silx/math/medianfilter/medianfilter.pyx":376 + /* "silx/math/medianfilter/medianfilter.pyx":426 * - * for x in prange(input_buffer.shape[0], nogil=True): + * for y in prange(input_buffer.shape[0], nogil=True): * median_filter.median_filter[uint16](<uint16*> & input_buffer[0, 0], # <<<<<<<<<<<<<< * <uint16*> & output_buffer[0, 0], * <int*>&kernel_size[0], @@ -5647,8 +6733,8 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_22_median_fi __pyx_t_4 = 0; __pyx_t_5 = 0; - /* "silx/math/medianfilter/medianfilter.pyx":377 - * for x in prange(input_buffer.shape[0], nogil=True): + /* "silx/math/medianfilter/medianfilter.pyx":427 + * for y in prange(input_buffer.shape[0], nogil=True): * median_filter.median_filter[uint16](<uint16*> & input_buffer[0, 0], * <uint16*> & output_buffer[0, 0], # <<<<<<<<<<<<<< * <int*>&kernel_size[0], @@ -5657,23 +6743,23 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_22_median_fi __pyx_t_6 = 0; __pyx_t_7 = 0; - /* "silx/math/medianfilter/medianfilter.pyx":378 + /* 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((__pyx_t_4silx_4math_12medianfilter_12medianfilter_uint16 *)(&(*__Pyx_BufPtrCContig2d(__pyx_t_5numpy_uint16_t *, __pyx_pybuffernd_output_buffer.rcbuffer->pybuffer.buf, __pyx_t_6, __pyx_pybuffernd_output_buffer.diminfo[0].strides, __pyx_t_7, __pyx_pybuffernd_output_buffer.diminfo[1].strides)))), ((int *)(&(*__Pyx_BufPtrCContig1d(__pyx_t_5numpy_int32_t *, __pyx_pybuffernd_kernel_size.rcbuffer->pybuffer.buf, __pyx_t_8, __pyx_pybuffernd_kernel_size.diminfo[0].strides)))), ((int *)__pyx_v_buffer_shape), __pyx_v_x, 0, __pyx_v_image_dim, __pyx_v_conditional); + median_filter<__pyx_t_4silx_4math_12medianfilter_12medianfilter_uint16>(((__pyx_t_4silx_4math_12medianfilter_12medianfilter_uint16 *)(&(*__Pyx_BufPtrCContig2d(__pyx_t_5numpy_uint16_t *, __pyx_pybuffernd_input_buffer.rcbuffer->pybuffer.buf, __pyx_t_4, __pyx_pybuffernd_input_buffer.diminfo[0].strides, __pyx_t_5, __pyx_pybuffernd_input_buffer.diminfo[1].strides)))), ((__pyx_t_4silx_4math_12medianfilter_12medianfilter_uint16 *)(&(*__Pyx_BufPtrCContig2d(__pyx_t_5numpy_uint16_t *, __pyx_pybuffernd_output_buffer.rcbuffer->pybuffer.buf, __pyx_t_6, __pyx_pybuffernd_output_buffer.diminfo[0].strides, __pyx_t_7, __pyx_pybuffernd_output_buffer.diminfo[1].strides)))), ((int *)(&(*__Pyx_BufPtrCContig1d(__pyx_t_5numpy_int32_t *, __pyx_pybuffernd_kernel_size.rcbuffer->pybuffer.buf, __pyx_t_8, __pyx_pybuffernd_kernel_size.diminfo[0].strides)))), ((int *)__pyx_v_buffer_shape), __pyx_v_y, 0, __pyx_v_image_dim, __pyx_v_conditional, __pyx_v_mode); } } } @@ -5687,10 +6773,10 @@ static PyObject *__pyx_pf_4silx_4math_12medianfilter_12medianfilter_22_median_fi #endif } - /* "silx/math/medianfilter/medianfilter.pyx":375 + /* "silx/math/medianfilter/medianfilter.pyx":425 * buffer_shape[1] = input_buffer.shape[1] * - * for x in prange(input_buffer.shape[0], nogil=True): # <<<<<<<<<<<<<< + * for y in prange(input_buffer.shape[0], nogil=True): # <<<<<<<<<<<<<< * median_filter.median_filter[uint16](<uint16*> & input_buffer[0, 0], * 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"../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":194 +/* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":197 * # experimental exception made for __getbuffer__ and __releasebuffer__ * # -- the details of this may change. * def __getbuffer__(ndarray self, Py_buffer* info, int flags): # <<<<<<<<<<<<<< @@ -5777,16 +6865,13 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P int __pyx_t_5; PyObject *__pyx_t_6 = NULL; char *__pyx_t_7; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__getbuffer__", 0); if (__pyx_v_info != NULL) { __pyx_v_info->obj = Py_None; __Pyx_INCREF(Py_None); __Pyx_GIVEREF(__pyx_v_info->obj); } - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":200 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":203 * # of 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"../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":220 * raise ValueError(u"ndarray is not C contiguous") * * if ((flags & pybuf.PyBUF_F_CONTIGUOUS == pybuf.PyBUF_F_CONTIGUOUS) # <<<<<<<<<<<<<< @@ -5913,7 +7022,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P goto __pyx_L9_bool_binop_done; } - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":218 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":221 * * if ((flags & pybuf.PyBUF_F_CONTIGUOUS == pybuf.PyBUF_F_CONTIGUOUS) * and not PyArray_CHKFLAGS(self, NPY_F_CONTIGUOUS)): # <<<<<<<<<<<<<< @@ -5923,23 +7032,39 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P __pyx_t_2 = ((!(PyArray_CHKFLAGS(__pyx_v_self, NPY_F_CONTIGUOUS) != 0)) != 0); __pyx_t_1 = __pyx_t_2; __pyx_L9_bool_binop_done:; + + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":220 + * raise ValueError(u"ndarray is not C contiguous") + * + * if ((flags & pybuf.PyBUF_F_CONTIGUOUS == pybuf.PyBUF_F_CONTIGUOUS) # <<<<<<<<<<<<<< + * and not PyArray_CHKFLAGS(self, NPY_F_CONTIGUOUS)): + * raise ValueError(u"ndarray is not Fortran contiguous") + */ if (__pyx_t_1) { - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":219 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":222 * if ((flags & pybuf.PyBUF_F_CONTIGUOUS == pybuf.PyBUF_F_CONTIGUOUS) * and not PyArray_CHKFLAGS(self, NPY_F_CONTIGUOUS)): * raise ValueError(u"ndarray is not Fortran contiguous") # <<<<<<<<<<<<<< * * info.buf = PyArray_DATA(self) */ - __pyx_t_3 = __Pyx_PyObject_Call(__pyx_builtin_ValueError, __pyx_tuple__9, NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 219; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __Pyx_PyObject_Call(__pyx_builtin_ValueError, __pyx_tuple__9, NULL); if (unlikely(!__pyx_t_3)) __PYX_ERR(1, 222, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_3); __Pyx_Raise(__pyx_t_3, 0, 0, 0); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - {__pyx_filename = __pyx_f[1]; __pyx_lineno = 219; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __PYX_ERR(1, 222, __pyx_L1_error) + + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":220 + * raise ValueError(u"ndarray is not C contiguous") + * + * if ((flags & pybuf.PyBUF_F_CONTIGUOUS == pybuf.PyBUF_F_CONTIGUOUS) # <<<<<<<<<<<<<< + * and not PyArray_CHKFLAGS(self, NPY_F_CONTIGUOUS)): + * raise ValueError(u"ndarray is not Fortran contiguous") + */ } - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":221 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":224 * raise ValueError(u"ndarray is not Fortran contiguous") * * info.buf = PyArray_DATA(self) # <<<<<<<<<<<<<< @@ -5948,7 +7073,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->buf = PyArray_DATA(__pyx_v_self); - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":222 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":225 * * info.buf = PyArray_DATA(self) * info.ndim = ndim # <<<<<<<<<<<<<< @@ -5957,7 +7082,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->ndim = __pyx_v_ndim; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":223 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":226 * info.buf = PyArray_DATA(self) * info.ndim = ndim * if copy_shape: # <<<<<<<<<<<<<< @@ -5967,7 +7092,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P __pyx_t_1 = (__pyx_v_copy_shape != 0); if (__pyx_t_1) { - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":226 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":229 * # Allocate new buffer for strides and shape info. * # This is allocated as one block, strides first. * info.strides = <Py_ssize_t*>stdlib.malloc(sizeof(Py_ssize_t) * <size_t>ndim * 2) # <<<<<<<<<<<<<< @@ -5976,7 +7101,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->strides = ((Py_ssize_t *)malloc((((sizeof(Py_ssize_t)) * ((size_t)__pyx_v_ndim)) * 2))); - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":227 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":230 * # This is allocated as one block, strides first. * info.strides = <Py_ssize_t*>stdlib.malloc(sizeof(Py_ssize_t) * <size_t>ndim * 2) * info.shape = info.strides + ndim # <<<<<<<<<<<<<< @@ -5985,7 +7110,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->shape = (__pyx_v_info->strides + __pyx_v_ndim); - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":228 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":231 * info.strides = <Py_ssize_t*>stdlib.malloc(sizeof(Py_ssize_t) * <size_t>ndim * 2) * info.shape = info.strides + ndim * for i in range(ndim): # <<<<<<<<<<<<<< @@ -5996,7 +7121,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P for (__pyx_t_5 = 0; __pyx_t_5 < __pyx_t_4; __pyx_t_5+=1) { __pyx_v_i = __pyx_t_5; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":229 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":232 * info.shape = info.strides + ndim * for i in range(ndim): * info.strides[i] = PyArray_STRIDES(self)[i] # <<<<<<<<<<<<<< @@ -6005,7 +7130,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ (__pyx_v_info->strides[__pyx_v_i]) = (PyArray_STRIDES(__pyx_v_self)[__pyx_v_i]); - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":230 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":233 * for i in range(ndim): * info.strides[i] = PyArray_STRIDES(self)[i] * info.shape[i] = PyArray_DIMS(self)[i] # <<<<<<<<<<<<<< @@ -6014,20 +7139,28 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ (__pyx_v_info->shape[__pyx_v_i]) = (PyArray_DIMS(__pyx_v_self)[__pyx_v_i]); } + + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":226 + * info.buf = PyArray_DATA(self) + * info.ndim = ndim + * if copy_shape: # <<<<<<<<<<<<<< + * # Allocate new buffer for strides and shape info. + * # This is allocated as one block, strides first. + */ goto __pyx_L11; } - /*else*/ { - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":232 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":235 * info.shape[i] = PyArray_DIMS(self)[i] * else: * info.strides = <Py_ssize_t*>PyArray_STRIDES(self) # <<<<<<<<<<<<<< * info.shape = <Py_ssize_t*>PyArray_DIMS(self) * info.suboffsets = NULL */ + /*else*/ { __pyx_v_info->strides = ((Py_ssize_t *)PyArray_STRIDES(__pyx_v_self)); - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":233 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":236 * else: * info.strides = <Py_ssize_t*>PyArray_STRIDES(self) * info.shape = <Py_ssize_t*>PyArray_DIMS(self) # <<<<<<<<<<<<<< @@ -6038,7 +7171,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P } __pyx_L11:; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":234 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":237 * info.strides = <Py_ssize_t*>PyArray_STRIDES(self) * info.shape = <Py_ssize_t*>PyArray_DIMS(self) * info.suboffsets = NULL # <<<<<<<<<<<<<< @@ -6047,7 +7180,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->suboffsets = NULL; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":235 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":238 * info.shape = <Py_ssize_t*>PyArray_DIMS(self) * info.suboffsets = NULL * info.itemsize = PyArray_ITEMSIZE(self) # <<<<<<<<<<<<<< @@ -6056,7 +7189,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->itemsize = PyArray_ITEMSIZE(__pyx_v_self); - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":236 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":239 * info.suboffsets = NULL * info.itemsize = PyArray_ITEMSIZE(self) * info.readonly = not PyArray_ISWRITEABLE(self) # <<<<<<<<<<<<<< @@ -6065,28 +7198,28 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->readonly = (!(PyArray_ISWRITEABLE(__pyx_v_self) != 0)); - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":239 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":242 * * cdef int t * cdef char* f = NULL # <<<<<<<<<<<<<< * cdef dtype descr = self.descr - * cdef list stack + * cdef int offset */ __pyx_v_f = NULL; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":240 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":243 * cdef int t * cdef char* f = NULL * cdef dtype descr = self.descr # <<<<<<<<<<<<<< - * cdef list stack * cdef int offset + * */ __pyx_t_3 = ((PyObject *)__pyx_v_self->descr); __Pyx_INCREF(__pyx_t_3); __pyx_v_descr = ((PyArray_Descr *)__pyx_t_3); __pyx_t_3 = 0; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":244 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":246 * cdef int offset * * cdef bint hasfields = PyDataType_HASFIELDS(descr) # <<<<<<<<<<<<<< @@ -6095,7 +7228,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_hasfields = PyDataType_HASFIELDS(__pyx_v_descr); - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":246 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":248 * cdef bint hasfields = PyDataType_HASFIELDS(descr) * * if not hasfields and not copy_shape: # <<<<<<<<<<<<<< @@ -6113,7 +7246,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P __pyx_L15_bool_binop_done:; if (__pyx_t_1) { - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":248 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":250 * if not hasfields and not copy_shape: * # do not call releasebuffer * info.obj = None # <<<<<<<<<<<<<< @@ -6125,17 +7258,25 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P __Pyx_GOTREF(__pyx_v_info->obj); __Pyx_DECREF(__pyx_v_info->obj); __pyx_v_info->obj = Py_None; + + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":248 + * cdef bint hasfields = PyDataType_HASFIELDS(descr) + * + * if not hasfields and not copy_shape: # <<<<<<<<<<<<<< + * # do not call releasebuffer + * info.obj = None + */ goto __pyx_L14; } - /*else*/ { - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":251 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":253 * else: * # need to call releasebuffer * info.obj = self # <<<<<<<<<<<<<< * * if not hasfields: */ + /*else*/ { __Pyx_INCREF(((PyObject *)__pyx_v_self)); __Pyx_GIVEREF(((PyObject *)__pyx_v_self)); __Pyx_GOTREF(__pyx_v_info->obj); @@ -6144,7 +7285,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P } __pyx_L14:; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":253 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":255 * info.obj = self * * if not hasfields: # <<<<<<<<<<<<<< @@ -6154,7 +7295,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P __pyx_t_1 = ((!(__pyx_v_hasfields != 0)) != 0); if (__pyx_t_1) { - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":254 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":256 * * if not hasfields: * t = descr.type_num # <<<<<<<<<<<<<< @@ -6164,7 +7305,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P __pyx_t_4 = __pyx_v_descr->type_num; __pyx_v_t = __pyx_t_4; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":255 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":257 * if not hasfields: * t = descr.type_num * if ((descr.byteorder == c'>' and little_endian) or # <<<<<<<<<<<<<< @@ -6184,7 +7325,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P } __pyx_L20_next_or:; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":256 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":258 * t = descr.type_num * if ((descr.byteorder == c'>' and little_endian) or * (descr.byteorder == c'<' and not little_endian)): # <<<<<<<<<<<<<< @@ -6200,43 +7341,51 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P __pyx_t_2 = ((!(__pyx_v_little_endian != 0)) != 0); __pyx_t_1 = __pyx_t_2; __pyx_L19_bool_binop_done:; + + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":257 + * if not hasfields: + * t = descr.type_num + * if ((descr.byteorder == c'>' and little_endian) or # <<<<<<<<<<<<<< + * (descr.byteorder == c'<' and not little_endian)): + * raise ValueError(u"Non-native byte order not supported") + */ if (__pyx_t_1) { - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":257 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":259 * if ((descr.byteorder == c'>' and little_endian) or * (descr.byteorder == c'<' and not little_endian)): * raise ValueError(u"Non-native byte order not supported") # <<<<<<<<<<<<<< * if t == NPY_BYTE: f = "b" * elif t == NPY_UBYTE: f = "B" */ - __pyx_t_3 = __Pyx_PyObject_Call(__pyx_builtin_ValueError, __pyx_tuple__10, NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 257; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __Pyx_PyObject_Call(__pyx_builtin_ValueError, __pyx_tuple__10, NULL); if (unlikely(!__pyx_t_3)) __PYX_ERR(1, 259, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_3); __Pyx_Raise(__pyx_t_3, 0, 0, 0); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - {__pyx_filename = __pyx_f[1]; __pyx_lineno = 257; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - } + __PYX_ERR(1, 259, __pyx_L1_error) - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":274 - * elif t == NPY_CDOUBLE: f = "Zd" - * elif t == NPY_CLONGDOUBLE: f = "Zg" - * elif t == NPY_OBJECT: f = "O" # <<<<<<<<<<<<<< - * else: - * raise ValueError(u"unknown dtype code in numpy.pxd (%d)" % t) + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":257 + * if not hasfields: + * t = descr.type_num + * if ((descr.byteorder == c'>' and little_endian) or # <<<<<<<<<<<<<< + * (descr.byteorder == c'<' and not little_endian)): + * raise ValueError(u"Non-native byte order not supported") */ - switch (__pyx_v_t) { + } - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":258 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":260 * (descr.byteorder == c'<' and not little_endian)): * raise ValueError(u"Non-native byte order not supported") * if t == NPY_BYTE: f = "b" # <<<<<<<<<<<<<< * elif t == NPY_UBYTE: f = "B" * elif t == NPY_SHORT: f = "h" */ + switch (__pyx_v_t) { case NPY_BYTE: - __pyx_v_f = __pyx_k_b; + __pyx_v_f = ((char *)"b"); break; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":259 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":261 * raise ValueError(u"Non-native byte order not supported") * if t == NPY_BYTE: f = "b" * elif t == NPY_UBYTE: f = "B" # <<<<<<<<<<<<<< @@ -6244,10 +7393,10 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P * elif t == NPY_USHORT: f = "H" */ case NPY_UBYTE: - __pyx_v_f = __pyx_k_B; + __pyx_v_f = ((char *)"B"); break; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":260 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":262 * if t == NPY_BYTE: f = "b" * elif t == NPY_UBYTE: f = "B" * elif t == NPY_SHORT: f = "h" # <<<<<<<<<<<<<< @@ -6255,10 +7404,10 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P * elif t == NPY_INT: f = "i" */ case NPY_SHORT: - __pyx_v_f = __pyx_k_h; + __pyx_v_f = ((char *)"h"); break; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":261 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":263 * elif t == NPY_UBYTE: f = "B" * elif t == NPY_SHORT: f = "h" * elif t == NPY_USHORT: f = "H" # <<<<<<<<<<<<<< @@ -6266,10 +7415,10 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P * elif t == NPY_UINT: f = "I" */ case NPY_USHORT: - __pyx_v_f = __pyx_k_H; + __pyx_v_f = ((char *)"H"); break; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":262 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":264 * elif t == NPY_SHORT: f = "h" * elif t == NPY_USHORT: f = "H" * elif t == NPY_INT: f = "i" # <<<<<<<<<<<<<< @@ -6277,10 +7426,10 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P * elif t == NPY_LONG: f = "l" */ case NPY_INT: - __pyx_v_f = __pyx_k_i; + __pyx_v_f = ((char *)"i"); break; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":263 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":265 * elif t == NPY_USHORT: f = "H" * elif t == NPY_INT: f = "i" * elif t == NPY_UINT: f = "I" # <<<<<<<<<<<<<< @@ -6288,10 +7437,10 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P * elif t == NPY_ULONG: f = "L" */ case NPY_UINT: - __pyx_v_f = __pyx_k_I; + __pyx_v_f = ((char *)"I"); break; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":264 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":266 * elif t == NPY_INT: f = "i" * elif t == NPY_UINT: f = "I" * elif t == NPY_LONG: f = "l" # <<<<<<<<<<<<<< @@ -6299,10 +7448,10 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P * elif t == NPY_LONGLONG: f = "q" */ case NPY_LONG: - __pyx_v_f = __pyx_k_l; + __pyx_v_f = ((char *)"l"); break; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":265 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":267 * elif t == NPY_UINT: f = "I" * elif t == NPY_LONG: f = "l" * elif t == NPY_ULONG: f = "L" # <<<<<<<<<<<<<< @@ -6310,10 +7459,10 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P * elif t == NPY_ULONGLONG: f = "Q" */ case NPY_ULONG: - __pyx_v_f = __pyx_k_L; + __pyx_v_f = ((char *)"L"); break; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":266 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":268 * elif t == NPY_LONG: f = "l" * elif t == NPY_ULONG: f = "L" * elif t == NPY_LONGLONG: f = "q" # 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elif t == NPY_ULONGLONG: f = "Q" * elif t == NPY_FLOAT: f = "f" # <<<<<<<<<<<<<< @@ -6343,10 +7492,10 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P * elif t == NPY_LONGDOUBLE: f = "g" */ case NPY_FLOAT: - __pyx_v_f = __pyx_k_f; + __pyx_v_f = ((char *)"f"); break; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":269 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":271 * elif t == NPY_ULONGLONG: f = "Q" * elif t == NPY_FLOAT: f = "f" * elif t == NPY_DOUBLE: f = "d" # <<<<<<<<<<<<<< @@ -6354,10 +7503,10 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P * elif t == NPY_CFLOAT: f = "Zf" */ case NPY_DOUBLE: - __pyx_v_f = __pyx_k_d; + __pyx_v_f = ((char *)"d"); break; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":270 + /* 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"../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":272 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":274 * elif t == NPY_LONGDOUBLE: f = "g" * elif t == NPY_CFLOAT: f = "Zf" * elif t == NPY_CDOUBLE: f = "Zd" # <<<<<<<<<<<<<< @@ -6387,10 +7536,10 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P * elif t == NPY_OBJECT: f = "O" */ case NPY_CDOUBLE: - __pyx_v_f = __pyx_k_Zd; + __pyx_v_f = ((char *)"Zd"); break; - /* "../../../../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":273 + /* "../../../../../usr/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":275 * elif t == NPY_CFLOAT: f = "Zf" * elif t == NPY_CDOUBLE: f = "Zd" * elif t == NPY_CLONGDOUBLE: f = "Zg" # <<<<<<<<<<<<<< @@ -6398,10 +7547,10 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P * else: */ case NPY_CLONGDOUBLE: - __pyx_v_f = 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__pyx_filename); __Pyx_RefNannyFinishContext(); return -1; __pyx_L4_argument_unpacking_done:; - __pyx_r = __pyx_memoryview_MemoryView_10memoryview___cinit__(((struct __pyx_memoryview_obj *)__pyx_v_self), __pyx_v_obj, __pyx_v_flags, __pyx_v_dtype_is_object); + __pyx_r = __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview___cinit__(((struct __pyx_memoryview_obj *)__pyx_v_self), __pyx_v_obj, __pyx_v_flags, __pyx_v_dtype_is_object); /* function exit code */ __Pyx_RefNannyFinishContext(); return __pyx_r; } -static int __pyx_memoryview_MemoryView_10memoryview___cinit__(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_obj, int __pyx_v_flags, int __pyx_v_dtype_is_object) { +static int __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview___cinit__(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_obj, int __pyx_v_flags, int __pyx_v_dtype_is_object) { int __pyx_r; __Pyx_RefNannyDeclarations int __pyx_t_1; int __pyx_t_2; int __pyx_t_3; int __pyx_t_4; - 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obj is not None: # <<<<<<<<<<<<<< * __Pyx_GetBuffer(obj, &self.view, flags) * if <PyObject *> self.view.obj == NULL: */ - __pyx_t_2 = (((PyObject *)Py_TYPE(((PyObject *)__pyx_v_self))) == ((PyObject *)((PyObject *)__pyx_memoryview_type))); + __pyx_t_2 = (((PyObject *)Py_TYPE(((PyObject *)__pyx_v_self))) == ((PyObject *)__pyx_memoryview_type)); __pyx_t_3 = (__pyx_t_2 != 0); if (!__pyx_t_3) { } else { @@ -9608,16 +11352,16 @@ static int __pyx_memoryview_MemoryView_10memoryview___cinit__(struct __pyx_memor __pyx_L4_bool_binop_done:; if (__pyx_t_1) { - /* "View.MemoryView":321 + /* "View.MemoryView":345 * self.flags = flags * if type(self) is memoryview or obj is not None: * __Pyx_GetBuffer(obj, &self.view, flags) # <<<<<<<<<<<<<< * if <PyObject *> self.view.obj == NULL: * (<__pyx_buffer *> &self.view).obj = Py_None */ - __pyx_t_4 = __Pyx_GetBuffer(__pyx_v_obj, (&__pyx_v_self->view), __pyx_v_flags); if (unlikely(__pyx_t_4 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 321; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = __Pyx_GetBuffer(__pyx_v_obj, (&__pyx_v_self->view), __pyx_v_flags); if (unlikely(__pyx_t_4 == -1)) __PYX_ERR(2, 345, __pyx_L1_error) - /* "View.MemoryView":322 + /* "View.MemoryView":346 * if type(self) is memoryview or obj is not None: * __Pyx_GetBuffer(obj, &self.view, flags) * if <PyObject *> self.view.obj == NULL: # <<<<<<<<<<<<<< @@ -9627,7 +11371,7 @@ static int __pyx_memoryview_MemoryView_10memoryview___cinit__(struct __pyx_memor __pyx_t_1 = ((((PyObject *)__pyx_v_self->view.obj) == NULL) != 0); if (__pyx_t_1) { - /* "View.MemoryView":323 + /* "View.MemoryView":347 * __Pyx_GetBuffer(obj, &self.view, flags) * if <PyObject *> self.view.obj == NULL: * (<__pyx_buffer *> &self.view).obj = Py_None # <<<<<<<<<<<<<< @@ -9636,90 +11380,177 @@ static int __pyx_memoryview_MemoryView_10memoryview___cinit__(struct __pyx_memor */ ((Py_buffer *)(&__pyx_v_self->view))->obj = Py_None; - /* "View.MemoryView":324 + /* 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__pyx_memoryview_thread_locks_used < THREAD_LOCKS_PREALLOCATED: + * self.lock = __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] + * __pyx_memoryview_thread_locks_used += 1 # <<<<<<<<<<<<<< + * if self.lock is NULL: + * self.lock = PyThread_allocate_lock() + */ + __pyx_memoryview_thread_locks_used = (__pyx_memoryview_thread_locks_used + 1); + + /* "View.MemoryView":351 * + * global __pyx_memoryview_thread_locks_used + * if __pyx_memoryview_thread_locks_used < THREAD_LOCKS_PREALLOCATED: # <<<<<<<<<<<<<< + * self.lock = __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] + * __pyx_memoryview_thread_locks_used += 1 + */ + } + + /* "View.MemoryView":354 + * self.lock = __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] + * __pyx_memoryview_thread_locks_used += 1 + * if self.lock is NULL: # <<<<<<<<<<<<<< + * self.lock = PyThread_allocate_lock() + * if self.lock is NULL: */ __pyx_t_1 = ((__pyx_v_self->lock == NULL) != 0); if (__pyx_t_1) { - /* 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self.view.format[1] == b'\0') # <<<<<<<<<<<<<< * else: * self.dtype_is_object = dtype_is_object */ - __pyx_t_5 = __Pyx_PyBytes_FromString(__pyx_v_self->view.format); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 331; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_GOTREF(__pyx_t_5); - __pyx_t_6 = PyObject_RichCompare(__pyx_t_5, __pyx_n_b_O, Py_EQ); __Pyx_XGOTREF(__pyx_t_6); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 331; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - __pyx_t_1 = __Pyx_PyObject_IsTrue(__pyx_t_6); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 331; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; + __pyx_t_2 = (((__pyx_v_self->view.format[0]) == 'O') != 0); + if (__pyx_t_2) { + } else { + __pyx_t_1 = __pyx_t_2; + goto __pyx_L11_bool_binop_done; + } + __pyx_t_2 = (((__pyx_v_self->view.format[1]) == '\x00') != 0); + __pyx_t_1 = __pyx_t_2; + __pyx_L11_bool_binop_done:; __pyx_v_self->dtype_is_object = __pyx_t_1; - goto __pyx_L8; + + /* "View.MemoryView":359 + * raise MemoryError + * + * if flags & PyBUF_FORMAT: # <<<<<<<<<<<<<< + * self.dtype_is_object = (self.view.format[0] == b'O' and self.view.format[1] == b'\0') + * else: + */ + goto __pyx_L10; } - /*else*/ { - /* "View.MemoryView":333 - * self.dtype_is_object = self.view.format == b'O' + /* "View.MemoryView":362 + * self.dtype_is_object = (self.view.format[0] == b'O' and self.view.format[1] == b'\0') * else: * self.dtype_is_object = dtype_is_object # <<<<<<<<<<<<<< * * self.acquisition_count_aligned_p = <__pyx_atomic_int *> align_pointer( */ + /*else*/ { __pyx_v_self->dtype_is_object = __pyx_v_dtype_is_object; } - __pyx_L8:; + __pyx_L10:; - /* "View.MemoryView":335 + /* "View.MemoryView":364 * self.dtype_is_object = dtype_is_object * * self.acquisition_count_aligned_p = <__pyx_atomic_int *> 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__pyx_memoryview_thread_locks_used; + for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { + __pyx_v_i = __pyx_t_4; + + /* "View.MemoryView":376 + * if self.lock != NULL: + * for i in range(__pyx_memoryview_thread_locks_used): + * if __pyx_memoryview_thread_locks[i] is self.lock: # <<<<<<<<<<<<<< + * __pyx_memoryview_thread_locks_used -= 1 + * if i != __pyx_memoryview_thread_locks_used: + */ + __pyx_t_2 = (((__pyx_memoryview_thread_locks[__pyx_v_i]) == __pyx_v_self->lock) != 0); + if (__pyx_t_2) { + + /* "View.MemoryView":377 + * for i in range(__pyx_memoryview_thread_locks_used): + * if __pyx_memoryview_thread_locks[i] is self.lock: + * __pyx_memoryview_thread_locks_used -= 1 # <<<<<<<<<<<<<< + * if i != __pyx_memoryview_thread_locks_used: + * __pyx_memoryview_thread_locks[i], __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] = ( + */ + __pyx_memoryview_thread_locks_used = (__pyx_memoryview_thread_locks_used - 1); + + /* "View.MemoryView":378 + * if __pyx_memoryview_thread_locks[i] is self.lock: + * __pyx_memoryview_thread_locks_used -= 1 + * if i != __pyx_memoryview_thread_locks_used: # <<<<<<<<<<<<<< + * __pyx_memoryview_thread_locks[i], __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] = ( + * __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used], __pyx_memoryview_thread_locks[i]) + */ + __pyx_t_2 = ((__pyx_v_i != __pyx_memoryview_thread_locks_used) != 0); + if (__pyx_t_2) { + + /* "View.MemoryView":380 + * if i != __pyx_memoryview_thread_locks_used: + * __pyx_memoryview_thread_locks[i], __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] = ( + * __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used], __pyx_memoryview_thread_locks[i]) # <<<<<<<<<<<<<< + * break + * else: + */ + __pyx_t_5 = (__pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used]); + __pyx_t_6 = (__pyx_memoryview_thread_locks[__pyx_v_i]); + + /* "View.MemoryView":379 + * 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{__pyx_filename = __pyx_f[2]; __pyx_lineno = 350; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PySequence_ITEM(__pyx_t_2, __pyx_t_3); __pyx_t_3++; if (unlikely(!__pyx_t_5)) __PYX_ERR(2, 389, __pyx_L1_error) + __Pyx_GOTREF(__pyx_t_5); #endif } else { if (__pyx_t_3 >= PyTuple_GET_SIZE(__pyx_t_2)) break; - #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_5 = PyTuple_GET_ITEM(__pyx_t_2, __pyx_t_3); __Pyx_INCREF(__pyx_t_5); __pyx_t_3++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 350; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + #if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS + __pyx_t_5 = PyTuple_GET_ITEM(__pyx_t_2, __pyx_t_3); __Pyx_INCREF(__pyx_t_5); __pyx_t_3++; if (unlikely(0 < 0)) __PYX_ERR(2, 389, __pyx_L1_error) #else - __pyx_t_5 = PySequence_ITEM(__pyx_t_2, __pyx_t_3); __pyx_t_3++; if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 350; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = 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__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "View.MemoryView":353 + /* "View.MemoryView":392 * itemp = pybuffer_index(&self.view, itemp, idx, dim) * * return itemp # <<<<<<<<<<<<<< @@ -9956,8 +11892,8 @@ static char *__pyx_memoryview_get_item_pointer(struct __pyx_memoryview_obj *__py __pyx_r = __pyx_v_itemp; goto __pyx_L0; - /* "View.MemoryView":346 - * PyThread_free_lock(self.lock) + /* "View.MemoryView":385 + * PyThread_free_lock(self.lock) * * cdef char *get_item_pointer(memoryview self, object index) except NULL: # <<<<<<<<<<<<<< * cdef Py_ssize_t dim @@ -9976,7 +11912,7 @@ static char *__pyx_memoryview_get_item_pointer(struct __pyx_memoryview_obj *__py return __pyx_r; } -/* "View.MemoryView":356 +/* "View.MemoryView":395 * * * def __getitem__(memoryview self, object index): # <<<<<<<<<<<<<< @@ -9990,14 +11926,14 @@ static PyObject *__pyx_memoryview___getitem__(PyObject *__pyx_v_self, PyObject * PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations 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__Pyx_XDECREF(__pyx_t_6); __pyx_t_6 = 0; __Pyx_XDECREF(__pyx_t_8); __pyx_t_8 = 0; __Pyx_XDECREF(__pyx_t_7); __pyx_t_7 = 0; - /* "View.MemoryView":386 + /* "View.MemoryView":425 * obj = memoryview(obj, self.flags|PyBUF_ANY_CONTIGUOUS, * self.dtype_is_object) * except TypeError: # <<<<<<<<<<<<<< * return None * */ - __pyx_t_9 = PyErr_ExceptionMatches(__pyx_builtin_TypeError); + __pyx_t_9 = __Pyx_PyErr_ExceptionMatches(__pyx_builtin_TypeError); if (__pyx_t_9) { __Pyx_AddTraceback("View.MemoryView.memoryview.is_slice", __pyx_clineno, __pyx_lineno, __pyx_filename); - if (__Pyx_GetException(&__pyx_t_7, &__pyx_t_8, &__pyx_t_6) < 0) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 386; __pyx_clineno = __LINE__; goto __pyx_L6_except_error;} + if (__Pyx_GetException(&__pyx_t_7, &__pyx_t_8, &__pyx_t_6) < 0) __PYX_ERR(2, 425, __pyx_L6_except_error) __Pyx_GOTREF(__pyx_t_7); __Pyx_GOTREF(__pyx_t_8); __Pyx_GOTREF(__pyx_t_6); - /* "View.MemoryView":387 + /* "View.MemoryView":426 * self.dtype_is_object) * 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__pyx_v_dst_slice = __pyx_memoryview_get_slice_from_memoryview(__pyx_v_dst, (&__pyx_v_tmp_slice)); - /* "View.MemoryView":408 + /* "View.MemoryView":447 * dst_slice = get_slice_from_memview(dst, &tmp_slice) * * if <size_t>self.view.itemsize > sizeof(array): # <<<<<<<<<<<<<< @@ -10670,7 +12650,7 @@ static PyObject *__pyx_memoryview_setitem_slice_assign_scalar(struct __pyx_memor __pyx_t_1 = ((((size_t)__pyx_v_self->view.itemsize) > (sizeof(__pyx_v_array))) != 0); if (__pyx_t_1) { - /* "View.MemoryView":409 + /* "View.MemoryView":448 * * if <size_t>self.view.itemsize > sizeof(array): * tmp = PyMem_Malloc(self.view.itemsize) # <<<<<<<<<<<<<< @@ -10679,7 +12659,7 @@ static PyObject *__pyx_memoryview_setitem_slice_assign_scalar(struct __pyx_memor */ __pyx_v_tmp = PyMem_Malloc(__pyx_v_self->view.itemsize); - /* "View.MemoryView":410 + /* "View.MemoryView":449 * if <size_t>self.view.itemsize > sizeof(array): * tmp = PyMem_Malloc(self.view.itemsize) * if tmp == NULL: # <<<<<<<<<<<<<< @@ 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__pyx_f[2]; __pyx_lineno = 425; __pyx_clineno = __LINE__; goto __pyx_L6_error;} + __pyx_t_2 = assert_direct_dimensions(__pyx_v_self->view.suboffsets, __pyx_v_self->view.ndim); if (unlikely(!__pyx_t_2)) __PYX_ERR(2, 464, __pyx_L6_error) __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - goto __pyx_L9; + + /* "View.MemoryView":463 + * + * + * if self.view.suboffsets != NULL: # <<<<<<<<<<<<<< + * assert_direct_dimensions(self.view.suboffsets, self.view.ndim) + * slice_assign_scalar(dst_slice, dst.view.ndim, self.view.itemsize, + */ } - __pyx_L9:; - /* "View.MemoryView":426 + /* "View.MemoryView":465 * if self.view.suboffsets != NULL: * assert_direct_dimensions(self.view.suboffsets, self.view.ndim) * slice_assign_scalar(dst_slice, dst.view.ndim, self.view.itemsize, # <<<<<<<<<<<<<< @@ -10800,7 +12810,7 @@ static PyObject *__pyx_memoryview_setitem_slice_assign_scalar(struct __pyx_memor __pyx_memoryview_slice_assign_scalar(__pyx_v_dst_slice, __pyx_v_dst->view.ndim, __pyx_v_self->view.itemsize, __pyx_v_item, __pyx_v_self->dtype_is_object); } - /* "View.MemoryView":429 + /* "View.MemoryView":468 * item, self.dtype_is_object) * finally: * PyMem_Free(tmp) # <<<<<<<<<<<<<< @@ -10813,8 +12823,10 @@ static PyObject *__pyx_memoryview_setitem_slice_assign_scalar(struct __pyx_memor goto __pyx_L7; } /*exception exit:*/{ + __Pyx_PyThreadState_declare __pyx_L6_error:; __pyx_t_6 = 0; __pyx_t_7 = 0; __pyx_t_8 = 0; __pyx_t_9 = 0; __pyx_t_10 = 0; __pyx_t_11 = 0; + __Pyx_PyThreadState_assign __Pyx_XDECREF(__pyx_t_2); __pyx_t_2 = 0; if (PY_MAJOR_VERSION >= 3) __Pyx_ExceptionSwap(&__pyx_t_9, &__pyx_t_10, &__pyx_t_11); if ((PY_MAJOR_VERSION < 3) || unlikely(__Pyx_GetException(&__pyx_t_6, &__pyx_t_7, &__pyx_t_8) < 0)) __Pyx_ErrFetch(&__pyx_t_6, &__pyx_t_7, &__pyx_t_8); @@ -10828,6 +12840,7 @@ static PyObject *__pyx_memoryview_setitem_slice_assign_scalar(struct __pyx_memor { PyMem_Free(__pyx_v_tmp); } + __Pyx_PyThreadState_assign if (PY_MAJOR_VERSION >= 3) { 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= __pyx_f[2]; __pyx_lineno = 703; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_8 = Py_TYPE(__pyx_t_3)->tp_iternext; if (unlikely(!__pyx_t_8)) __PYX_ERR(2, 732, __pyx_L1_error) } for (;;) { if (likely(!__pyx_t_8)) { if (likely(PyList_CheckExact(__pyx_t_3))) { if (__pyx_t_7 >= PyList_GET_SIZE(__pyx_t_3)) break; - #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_9 = PyList_GET_ITEM(__pyx_t_3, __pyx_t_7); __Pyx_INCREF(__pyx_t_9); __pyx_t_7++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 703; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + #if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS + __pyx_t_9 = PyList_GET_ITEM(__pyx_t_3, __pyx_t_7); __Pyx_INCREF(__pyx_t_9); __pyx_t_7++; if (unlikely(0 < 0)) __PYX_ERR(2, 732, __pyx_L1_error) #else - __pyx_t_9 = PySequence_ITEM(__pyx_t_3, __pyx_t_7); __pyx_t_7++; if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 703; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = PySequence_ITEM(__pyx_t_3, __pyx_t_7); __pyx_t_7++; if (unlikely(!__pyx_t_9)) __PYX_ERR(2, 732, __pyx_L1_error) + __Pyx_GOTREF(__pyx_t_9); #endif } else { if (__pyx_t_7 >= PyTuple_GET_SIZE(__pyx_t_3)) break; - #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_9 = PyTuple_GET_ITEM(__pyx_t_3, __pyx_t_7); __Pyx_INCREF(__pyx_t_9); __pyx_t_7++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 703; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + #if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS + __pyx_t_9 = PyTuple_GET_ITEM(__pyx_t_3, __pyx_t_7); __Pyx_INCREF(__pyx_t_9); __pyx_t_7++; if (unlikely(0 < 0)) __PYX_ERR(2, 732, __pyx_L1_error) #else - __pyx_t_9 = PySequence_ITEM(__pyx_t_3, __pyx_t_7); __pyx_t_7++; if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 703; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = PySequence_ITEM(__pyx_t_3, __pyx_t_7); __pyx_t_7++; if (unlikely(!__pyx_t_9)) __PYX_ERR(2, 732, __pyx_L1_error) + __Pyx_GOTREF(__pyx_t_9); #endif } } else { @@ -13869,7 +15975,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ PyObject* exc_type = PyErr_Occurred(); if (exc_type) { if (likely(exc_type == PyExc_StopIteration || PyErr_GivenExceptionMatches(exc_type, PyExc_StopIteration))) PyErr_Clear(); - else {__pyx_filename = __pyx_f[2]; __pyx_lineno = 703; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + else __PYX_ERR(2, 732, __pyx_L1_error) } break; } @@ -13880,7 +15986,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ __pyx_v_dim = __pyx_t_6; __pyx_t_6 = (__pyx_t_6 + 1); - /* "View.MemoryView":704 + /* "View.MemoryView":733 * * for dim, index in enumerate(indices): * if PyIndex_Check(index): # <<<<<<<<<<<<<< @@ -13890,27 +15996,35 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ __pyx_t_2 = (PyIndex_Check(__pyx_v_index) != 0); if (__pyx_t_2) { - /* "View.MemoryView":708 + /* 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(__pyx_v_p_src->strides[__pyx_v_dim]), (__pyx_v_p_src->suboffsets[__pyx_v_dim]), __pyx_v_dim, __pyx_v_new_ndim, __pyx_v_p_suboffset_dim, __pyx_t_10, 0, 0, 0, 0, 0, 0); if (unlikely(__pyx_t_11 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 705; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_11 = __pyx_memoryview_slice_memviewslice(__pyx_v_p_dst, (__pyx_v_p_src->shape[__pyx_v_dim]), (__pyx_v_p_src->strides[__pyx_v_dim]), (__pyx_v_p_src->suboffsets[__pyx_v_dim]), __pyx_v_dim, __pyx_v_new_ndim, __pyx_v_p_suboffset_dim, __pyx_t_10, 0, 0, 0, 0, 0, 0); if (unlikely(__pyx_t_11 == -1)) __PYX_ERR(2, 734, __pyx_L1_error) + + /* "View.MemoryView":733 + * + * for dim, index in enumerate(indices): + * if PyIndex_Check(index): # <<<<<<<<<<<<<< + * slice_memviewslice( + * p_dst, p_src.shape[dim], p_src.strides[dim], p_src.suboffsets[dim], + */ goto __pyx_L6; } - /* "View.MemoryView":711 + /* "View.MemoryView":740 * 0, 0, 0, # have_{start,stop,step} * False) * elif index is None: # 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__pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_start); if (unlikely(!__pyx_t_9)) __PYX_ERR(2, 746, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_9); - __pyx_t_1 = __Pyx_PyObject_IsTrue(__pyx_t_9); if (unlikely(__pyx_t_1 < 0)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 717; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyObject_IsTrue(__pyx_t_9); if (unlikely(__pyx_t_1 < 0)) __PYX_ERR(2, 746, __pyx_L1_error) if (!__pyx_t_1) { __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; } else { - __pyx_t_12 = __Pyx_PyIndex_AsSsize_t(__pyx_t_9); if (unlikely((__pyx_t_12 == (Py_ssize_t)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 717; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_12 = __Pyx_PyIndex_AsSsize_t(__pyx_t_9); if (unlikely((__pyx_t_12 == (Py_ssize_t)-1) && PyErr_Occurred())) __PYX_ERR(2, 746, __pyx_L1_error) __pyx_t_10 = __pyx_t_12; __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; goto __pyx_L7_bool_binop_done; @@ -13982,20 +16104,20 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ __pyx_L7_bool_binop_done:; __pyx_v_start = __pyx_t_10; - /* "View.MemoryView":718 + /* "View.MemoryView":747 * else: * start = index.start or 0 * stop = index.stop or 0 # <<<<<<<<<<<<<< * step = index.step or 0 * */ - __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_stop); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 718; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_stop); if (unlikely(!__pyx_t_9)) __PYX_ERR(2, 747, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_9); - __pyx_t_1 = __Pyx_PyObject_IsTrue(__pyx_t_9); if (unlikely(__pyx_t_1 < 0)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 718; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyObject_IsTrue(__pyx_t_9); if (unlikely(__pyx_t_1 < 0)) __PYX_ERR(2, 747, __pyx_L1_error) if (!__pyx_t_1) { __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; } else { - __pyx_t_12 = __Pyx_PyIndex_AsSsize_t(__pyx_t_9); if (unlikely((__pyx_t_12 == (Py_ssize_t)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 718; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_12 = __Pyx_PyIndex_AsSsize_t(__pyx_t_9); if (unlikely((__pyx_t_12 == (Py_ssize_t)-1) && PyErr_Occurred())) __PYX_ERR(2, 747, __pyx_L1_error) __pyx_t_10 = __pyx_t_12; __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; goto __pyx_L9_bool_binop_done; @@ -14004,20 +16126,20 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ __pyx_L9_bool_binop_done:; __pyx_v_stop = __pyx_t_10; - /* "View.MemoryView":719 + /* "View.MemoryView":748 * start = index.start or 0 * stop = index.stop or 0 * step = index.step or 0 # <<<<<<<<<<<<<< * * have_start = index.start is not None */ - __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_step); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 719; __pyx_clineno = __LINE__; goto 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index.step is not None * */ - __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_stop); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 722; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_stop); if (unlikely(!__pyx_t_9)) __PYX_ERR(2, 751, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_9); __pyx_t_1 = (__pyx_t_9 != Py_None); __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; __pyx_v_have_stop = __pyx_t_1; - /* "View.MemoryView":723 + /* "View.MemoryView":752 * have_start = index.start is not None * have_stop = index.stop is not None * have_step = index.step is not None # <<<<<<<<<<<<<< * * slice_memviewslice( */ - __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_step); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 723; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_step); if (unlikely(!__pyx_t_9)) __PYX_ERR(2, 752, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_9); __pyx_t_1 = (__pyx_t_9 != Py_None); __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; __pyx_v_have_step = __pyx_t_1; - /* "View.MemoryView":725 + /* "View.MemoryView":754 * have_step = index.step is not None * * slice_memviewslice( # <<<<<<<<<<<<<< * p_dst, p_src.shape[dim], p_src.strides[dim], p_src.suboffsets[dim], * dim, new_ndim, p_suboffset_dim, */ - __pyx_t_11 = __pyx_memoryview_slice_memviewslice(__pyx_v_p_dst, (__pyx_v_p_src->shape[__pyx_v_dim]), (__pyx_v_p_src->strides[__pyx_v_dim]), (__pyx_v_p_src->suboffsets[__pyx_v_dim]), __pyx_v_dim, __pyx_v_new_ndim, __pyx_v_p_suboffset_dim, __pyx_v_start, __pyx_v_stop, __pyx_v_step, __pyx_v_have_start, __pyx_v_have_stop, __pyx_v_have_step, 1); if (unlikely(__pyx_t_11 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 725; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_11 = __pyx_memoryview_slice_memviewslice(__pyx_v_p_dst, (__pyx_v_p_src->shape[__pyx_v_dim]), (__pyx_v_p_src->strides[__pyx_v_dim]), (__pyx_v_p_src->suboffsets[__pyx_v_dim]), __pyx_v_dim, __pyx_v_new_ndim, __pyx_v_p_suboffset_dim, __pyx_v_start, __pyx_v_stop, __pyx_v_step, __pyx_v_have_start, __pyx_v_have_stop, __pyx_v_have_step, 1); if (unlikely(__pyx_t_11 == -1)) __PYX_ERR(2, 754, __pyx_L1_error) - /* "View.MemoryView":731 + /* "View.MemoryView":760 * have_start, have_stop, have_step, * True) * new_ndim += 1 # <<<<<<<<<<<<<< @@ -14085,7 +16207,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ } __pyx_L6:; - /* "View.MemoryView":703 + /* "View.MemoryView":732 * cdef bint have_start, have_stop, have_step * * for dim, index in enumerate(indices): # <<<<<<<<<<<<<< @@ -14095,18 +16217,18 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ } __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - /* "View.MemoryView":733 + /* "View.MemoryView":762 * new_ndim += 1 * * if isinstance(memview, _memoryviewslice): # <<<<<<<<<<<<<< * return memoryview_fromslice(dst, new_ndim, * memviewsliceobj.to_object_func, */ - __pyx_t_1 = __Pyx_TypeCheck(((PyObject *)__pyx_v_memview), ((PyObject *)__pyx_memoryviewslice_type)); + __pyx_t_1 = __Pyx_TypeCheck(((PyObject *)__pyx_v_memview), __pyx_memoryviewslice_type); __pyx_t_2 = (__pyx_t_1 != 0); if (__pyx_t_2) { - /* "View.MemoryView":734 + /* "View.MemoryView":763 * * if isinstance(memview, _memoryviewslice): * return memoryview_fromslice(dst, new_ndim, # <<<<<<<<<<<<<< @@ -14115,73 +16237,81 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ */ __Pyx_XDECREF(((PyObject *)__pyx_r)); - /* "View.MemoryView":735 + /* "View.MemoryView":764 * if isinstance(memview, _memoryviewslice): * return memoryview_fromslice(dst, new_ndim, * memviewsliceobj.to_object_func, # <<<<<<<<<<<<<< * memviewsliceobj.to_dtype_func, * memview.dtype_is_object) */ - if (unlikely(!__pyx_v_memviewsliceobj)) { __Pyx_RaiseUnboundLocalError("memviewsliceobj"); {__pyx_filename = __pyx_f[2]; __pyx_lineno = 735; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } + if (unlikely(!__pyx_v_memviewsliceobj)) { __Pyx_RaiseUnboundLocalError("memviewsliceobj"); __PYX_ERR(2, 764, __pyx_L1_error) } - /* "View.MemoryView":736 + /* "View.MemoryView":765 * return memoryview_fromslice(dst, new_ndim, * memviewsliceobj.to_object_func, * memviewsliceobj.to_dtype_func, # <<<<<<<<<<<<<< * memview.dtype_is_object) * else: */ - if (unlikely(!__pyx_v_memviewsliceobj)) { __Pyx_RaiseUnboundLocalError("memviewsliceobj"); {__pyx_filename = __pyx_f[2]; __pyx_lineno = 736; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } + if (unlikely(!__pyx_v_memviewsliceobj)) { __Pyx_RaiseUnboundLocalError("memviewsliceobj"); __PYX_ERR(2, 765, __pyx_L1_error) } - /* "View.MemoryView":734 + /* "View.MemoryView":763 * * if isinstance(memview, _memoryviewslice): * return memoryview_fromslice(dst, new_ndim, # <<<<<<<<<<<<<< * memviewsliceobj.to_object_func, * memviewsliceobj.to_dtype_func, */ - __pyx_t_3 = __pyx_memoryview_fromslice(__pyx_v_dst, __pyx_v_new_ndim, __pyx_v_memviewsliceobj->to_object_func, __pyx_v_memviewsliceobj->to_dtype_func, __pyx_v_memview->dtype_is_object); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 734; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __pyx_memoryview_fromslice(__pyx_v_dst, __pyx_v_new_ndim, __pyx_v_memviewsliceobj->to_object_func, __pyx_v_memviewsliceobj->to_dtype_func, __pyx_v_memview->dtype_is_object); if (unlikely(!__pyx_t_3)) __PYX_ERR(2, 763, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_3); - if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_memoryview_type))))) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 734; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_memoryview_type))))) __PYX_ERR(2, 763, __pyx_L1_error) __pyx_r = ((struct __pyx_memoryview_obj *)__pyx_t_3); __pyx_t_3 = 0; goto __pyx_L0; + + /* "View.MemoryView":762 + * new_ndim += 1 + * + * if isinstance(memview, _memoryviewslice): # <<<<<<<<<<<<<< + * return memoryview_fromslice(dst, new_ndim, + * memviewsliceobj.to_object_func, + */ } - /*else*/ { - /* "View.MemoryView":739 + /* "View.MemoryView":768 * memview.dtype_is_object) * else: * return memoryview_fromslice(dst, new_ndim, NULL, NULL, # <<<<<<<<<<<<<< * memview.dtype_is_object) * */ + /*else*/ { __Pyx_XDECREF(((PyObject *)__pyx_r)); - /* "View.MemoryView":740 + /* "View.MemoryView":769 * else: * return memoryview_fromslice(dst, new_ndim, NULL, NULL, * memview.dtype_is_object) # <<<<<<<<<<<<<< * * */ - __pyx_t_3 = __pyx_memoryview_fromslice(__pyx_v_dst, __pyx_v_new_ndim, NULL, NULL, __pyx_v_memview->dtype_is_object); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 739; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __pyx_memoryview_fromslice(__pyx_v_dst, __pyx_v_new_ndim, NULL, NULL, __pyx_v_memview->dtype_is_object); if (unlikely(!__pyx_t_3)) __PYX_ERR(2, 768, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_3); - /* "View.MemoryView":739 + /* "View.MemoryView":768 * memview.dtype_is_object) * else: * return memoryview_fromslice(dst, new_ndim, NULL, NULL, # <<<<<<<<<<<<<< * memview.dtype_is_object) * */ - if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_memoryview_type))))) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 739; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_memoryview_type))))) __PYX_ERR(2, 768, __pyx_L1_error) __pyx_r = ((struct __pyx_memoryview_obj *)__pyx_t_3); __pyx_t_3 = 0; goto __pyx_L0; } - /* "View.MemoryView":667 + /* "View.MemoryView":696 * * @cname('__pyx_memview_slice') * cdef memoryview memview_slice(memoryview memview, object indices): # <<<<<<<<<<<<<< @@ -14203,7 +16333,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ return __pyx_r; } -/* "View.MemoryView":764 +/* "View.MemoryView":793 * * @cname('__pyx_memoryview_slice_memviewslice') * cdef int slice_memviewslice( # <<<<<<<<<<<<<< @@ -14218,11 +16348,8 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, int __pyx_t_1; int __pyx_t_2; int __pyx_t_3; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; - /* "View.MemoryView":784 + /* "View.MemoryView":813 * cdef bint negative_step * * if not is_slice: # <<<<<<<<<<<<<< @@ -14232,7 +16359,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_1 = ((!(__pyx_v_is_slice != 0)) != 0); if (__pyx_t_1) { - /* "View.MemoryView":786 + /* "View.MemoryView":815 * if not is_slice: * * if start < 0: # <<<<<<<<<<<<<< @@ -14242,7 +16369,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_1 = ((__pyx_v_start < 0) != 0); if (__pyx_t_1) { - /* "View.MemoryView":787 + /* "View.MemoryView":816 * * if start < 0: * start += shape # <<<<<<<<<<<<<< @@ -14250,11 +16377,17 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * _err_dim(IndexError, "Index out of bounds (axis %d)", dim) */ __pyx_v_start = (__pyx_v_start + __pyx_v_shape); - goto __pyx_L4; + + /* "View.MemoryView":815 + * if not is_slice: + * + * if start < 0: # <<<<<<<<<<<<<< + * start += shape + * if not 0 <= start < shape: + */ } - __pyx_L4:; - /* "View.MemoryView":788 + /* "View.MemoryView":817 * if start < 0: * start += shape * if not 0 <= start < shape: # <<<<<<<<<<<<<< @@ -14268,28 +16401,42 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((!(__pyx_t_1 != 0)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":789 + /* "View.MemoryView":818 * start += shape * if not 0 <= start < shape: * _err_dim(IndexError, "Index out of bounds (axis %d)", dim) # <<<<<<<<<<<<<< * else: * */ - __pyx_t_3 = __pyx_memoryview_err_dim(__pyx_builtin_IndexError, __pyx_k_Index_out_of_bounds_axis_d, __pyx_v_dim); if (unlikely(__pyx_t_3 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 789; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - goto __pyx_L5; + __pyx_t_3 = __pyx_memoryview_err_dim(__pyx_builtin_IndexError, ((char *)"Index out of bounds (axis %d)"), __pyx_v_dim); if (unlikely(__pyx_t_3 == -1)) __PYX_ERR(2, 818, __pyx_L1_error) + + /* "View.MemoryView":817 + * if start < 0: + * start += shape + * if not 0 <= start < shape: # <<<<<<<<<<<<<< + * _err_dim(IndexError, "Index out of bounds (axis %d)", dim) + * else: + */ } - __pyx_L5:; + + /* "View.MemoryView":813 + * cdef bint negative_step + * + * if not is_slice: # <<<<<<<<<<<<<< + * + * if start < 0: + */ goto __pyx_L3; } - /*else*/ { - /* "View.MemoryView":792 + /* "View.MemoryView":821 * else: * * negative_step = have_step != 0 and step < 0 # <<<<<<<<<<<<<< * * if have_step and step == 0: */ + /*else*/ { __pyx_t_1 = ((__pyx_v_have_step != 0) != 0); if (__pyx_t_1) { } else { @@ -14301,7 +16448,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_L6_bool_binop_done:; __pyx_v_negative_step = __pyx_t_2; - /* "View.MemoryView":794 + /* "View.MemoryView":823 * negative_step = have_step != 0 and step < 0 * * if have_step and step == 0: # <<<<<<<<<<<<<< @@ -14319,19 +16466,25 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_L9_bool_binop_done:; if (__pyx_t_2) { - /* "View.MemoryView":795 + /* "View.MemoryView":824 * * if have_step and step == 0: * _err_dim(ValueError, "Step may not be zero (axis %d)", dim) # <<<<<<<<<<<<<< * * */ - __pyx_t_3 = __pyx_memoryview_err_dim(__pyx_builtin_ValueError, __pyx_k_Step_may_not_be_zero_axis_d, __pyx_v_dim); if (unlikely(__pyx_t_3 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 795; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - goto __pyx_L8; + __pyx_t_3 = __pyx_memoryview_err_dim(__pyx_builtin_ValueError, ((char *)"Step may not be zero (axis %d)"), __pyx_v_dim); if (unlikely(__pyx_t_3 == -1)) __PYX_ERR(2, 824, __pyx_L1_error) + + /* "View.MemoryView":823 + * negative_step = have_step != 0 and step < 0 + * + * if have_step and step == 0: # <<<<<<<<<<<<<< + * _err_dim(ValueError, "Step may not be zero (axis %d)", dim) + * + */ } - __pyx_L8:; - /* "View.MemoryView":798 + /* "View.MemoryView":827 * * * if have_start: # <<<<<<<<<<<<<< @@ -14341,7 +16494,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = (__pyx_v_have_start != 0); if (__pyx_t_2) { - /* "View.MemoryView":799 + /* "View.MemoryView":828 * * if have_start: * if start < 0: # <<<<<<<<<<<<<< @@ -14351,7 +16504,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_start < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":800 + /* "View.MemoryView":829 * if have_start: * if start < 0: * start += shape # <<<<<<<<<<<<<< @@ -14360,7 +16513,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_start = (__pyx_v_start + __pyx_v_shape); - /* "View.MemoryView":801 + /* "View.MemoryView":830 * if start < 0: * start += shape * if start < 0: # <<<<<<<<<<<<<< @@ -14370,7 +16523,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_start < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":802 + /* "View.MemoryView":831 * start += shape * if start < 0: * start = 0 # <<<<<<<<<<<<<< @@ -14378,13 +16531,27 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * if negative_step: */ __pyx_v_start = 0; - goto __pyx_L13; + + /* "View.MemoryView":830 + * if start < 0: + * start += shape + * if start < 0: # <<<<<<<<<<<<<< + * start = 0 + * elif start >= shape: + */ } - __pyx_L13:; + + /* "View.MemoryView":828 + * + * if have_start: + * if start < 0: # <<<<<<<<<<<<<< + * start += shape + * if start < 0: + */ goto __pyx_L12; } - /* "View.MemoryView":803 + /* "View.MemoryView":832 * if start < 0: * start = 0 * elif start >= shape: # <<<<<<<<<<<<<< @@ -14394,7 +16561,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_start >= __pyx_v_shape) != 0); if (__pyx_t_2) { - /* "View.MemoryView":804 + /* "View.MemoryView":833 * start = 0 * elif start >= shape: * if negative_step: # <<<<<<<<<<<<<< @@ -14404,7 +16571,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = (__pyx_v_negative_step != 0); if (__pyx_t_2) { - /* "View.MemoryView":805 + /* "View.MemoryView":834 * elif start >= shape: * if negative_step: * start = shape - 1 # <<<<<<<<<<<<<< @@ -14412,38 +16579,61 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * start = shape */ __pyx_v_start = (__pyx_v_shape - 1); + + /* "View.MemoryView":833 + * start = 0 + * elif start >= shape: + * if negative_step: # <<<<<<<<<<<<<< + * start = shape - 1 + * else: + */ goto __pyx_L14; } - /*else*/ { - /* "View.MemoryView":807 + /* "View.MemoryView":836 * start = shape - 1 * else: * start = shape # <<<<<<<<<<<<<< * else: * if negative_step: */ + /*else*/ { __pyx_v_start = __pyx_v_shape; } __pyx_L14:; - goto __pyx_L12; + + /* "View.MemoryView":832 + * if start < 0: + * start = 0 + * elif start >= shape: # <<<<<<<<<<<<<< + * if negative_step: + * start = shape - 1 + */ } __pyx_L12:; + + /* "View.MemoryView":827 + * + * + * if have_start: # <<<<<<<<<<<<<< + * if start < 0: + * start += shape + */ goto __pyx_L11; } - /*else*/ { - /* "View.MemoryView":809 + /* "View.MemoryView":838 * start = shape * else: * if negative_step: # <<<<<<<<<<<<<< * start = shape - 1 * else: */ + /*else*/ { __pyx_t_2 = (__pyx_v_negative_step != 0); if (__pyx_t_2) { - /* "View.MemoryView":810 + /* "View.MemoryView":839 * else: * if negative_step: * start = shape - 1 # <<<<<<<<<<<<<< @@ -14451,24 +16641,32 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * start = 0 */ __pyx_v_start = (__pyx_v_shape - 1); + + /* "View.MemoryView":838 + * start = shape + * else: + * if negative_step: # <<<<<<<<<<<<<< + * start = shape - 1 + * else: + */ goto __pyx_L15; } - /*else*/ { - /* "View.MemoryView":812 + /* "View.MemoryView":841 * start = shape - 1 * else: * start = 0 # <<<<<<<<<<<<<< * * if have_stop: */ + /*else*/ { __pyx_v_start = 0; } __pyx_L15:; } __pyx_L11:; - /* "View.MemoryView":814 + /* "View.MemoryView":843 * start = 0 * * if have_stop: # <<<<<<<<<<<<<< @@ -14478,7 +16676,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = (__pyx_v_have_stop != 0); if (__pyx_t_2) { - /* "View.MemoryView":815 + /* "View.MemoryView":844 * * if have_stop: * if stop < 0: # <<<<<<<<<<<<<< @@ -14488,7 +16686,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_stop < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":816 + /* "View.MemoryView":845 * if have_stop: * if stop < 0: * stop += shape # <<<<<<<<<<<<<< @@ -14497,7 +16695,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_stop = (__pyx_v_stop + __pyx_v_shape); - /* "View.MemoryView":817 + /* "View.MemoryView":846 * if stop < 0: * stop += shape * if stop < 0: # <<<<<<<<<<<<<< @@ -14507,7 +16705,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_stop < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":818 + /* "View.MemoryView":847 * stop += shape * if stop < 0: * stop = 0 # <<<<<<<<<<<<<< @@ -14515,13 +16713,27 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * stop = shape */ __pyx_v_stop = 0; - goto __pyx_L18; + + /* "View.MemoryView":846 + * if stop < 0: + * stop += shape + * if stop < 0: # <<<<<<<<<<<<<< + * stop = 0 + * elif stop > shape: + */ } - __pyx_L18:; + + /* "View.MemoryView":844 + * + * if have_stop: + * if stop < 0: # <<<<<<<<<<<<<< + * stop += shape + * if stop < 0: + */ goto __pyx_L17; } - /* "View.MemoryView":819 + /* "View.MemoryView":848 * if stop < 0: * stop = 0 * elif stop > shape: # <<<<<<<<<<<<<< @@ -14531,7 +16743,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_stop > __pyx_v_shape) != 0); if (__pyx_t_2) { - /* "View.MemoryView":820 + /* "View.MemoryView":849 * stop = 0 * elif stop > shape: * stop = shape # <<<<<<<<<<<<<< @@ -14539,49 +16751,72 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * if negative_step: */ __pyx_v_stop = __pyx_v_shape; - goto __pyx_L17; + + /* "View.MemoryView":848 + * if stop < 0: + * stop = 0 + * elif stop > shape: # <<<<<<<<<<<<<< + * stop = shape + * else: + */ } __pyx_L17:; + + /* "View.MemoryView":843 + * start = 0 + * + * if have_stop: # <<<<<<<<<<<<<< + * if stop < 0: + * stop += shape + */ goto __pyx_L16; } - /*else*/ { - /* "View.MemoryView":822 + /* "View.MemoryView":851 * stop = shape * else: * if negative_step: # <<<<<<<<<<<<<< * stop = -1 * else: */ + /*else*/ { __pyx_t_2 = (__pyx_v_negative_step != 0); if (__pyx_t_2) { - /* "View.MemoryView":823 + /* "View.MemoryView":852 * else: * if negative_step: * stop = -1 # <<<<<<<<<<<<<< * else: * stop = shape */ - __pyx_v_stop = -1; + __pyx_v_stop = -1L; + + /* "View.MemoryView":851 + * stop = shape + * else: + * if negative_step: # <<<<<<<<<<<<<< + * stop = -1 + * else: + */ goto __pyx_L19; } - /*else*/ { - /* "View.MemoryView":825 + /* "View.MemoryView":854 * stop = -1 * else: * stop = shape # <<<<<<<<<<<<<< * * if not have_step: */ + /*else*/ { __pyx_v_stop = __pyx_v_shape; } __pyx_L19:; } __pyx_L16:; - /* "View.MemoryView":827 + /* "View.MemoryView":856 * stop = shape * * if not have_step: # <<<<<<<<<<<<<< @@ -14591,7 +16826,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((!(__pyx_v_have_step != 0)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":828 + /* "View.MemoryView":857 * * if not have_step: * step = 1 # <<<<<<<<<<<<<< @@ -14599,11 +16834,17 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * */ __pyx_v_step = 1; - goto __pyx_L20; + + /* "View.MemoryView":856 + * stop = shape + * + * if not have_step: # <<<<<<<<<<<<<< + * step = 1 + * + */ } - __pyx_L20:; - /* "View.MemoryView":832 + /* "View.MemoryView":861 * * with cython.cdivision(True): * new_shape = (stop - start) // step # <<<<<<<<<<<<<< @@ -14612,7 +16853,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_new_shape = ((__pyx_v_stop - __pyx_v_start) / __pyx_v_step); - /* "View.MemoryView":834 + /* "View.MemoryView":863 * new_shape = (stop - start) // step * * if (stop - start) - step * new_shape: # <<<<<<<<<<<<<< @@ -14622,7 +16863,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = (((__pyx_v_stop - __pyx_v_start) - (__pyx_v_step * __pyx_v_new_shape)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":835 + /* "View.MemoryView":864 * * if (stop - start) - step * new_shape: * new_shape += 1 # <<<<<<<<<<<<<< @@ -14630,11 +16871,17 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * if new_shape < 0: */ __pyx_v_new_shape = (__pyx_v_new_shape + 1); - goto __pyx_L21; + + /* "View.MemoryView":863 + * new_shape = (stop - start) // step + * + * if (stop - start) - step * new_shape: # <<<<<<<<<<<<<< + * new_shape += 1 + * + */ } - __pyx_L21:; - /* "View.MemoryView":837 + /* "View.MemoryView":866 * new_shape += 1 * * if new_shape < 0: # <<<<<<<<<<<<<< @@ -14644,7 +16891,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_new_shape < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":838 + /* "View.MemoryView":867 * * if new_shape < 0: * new_shape = 0 # <<<<<<<<<<<<<< @@ -14652,11 +16899,17 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * */ __pyx_v_new_shape = 0; - goto __pyx_L22; + + /* "View.MemoryView":866 + * new_shape += 1 + * + * if new_shape < 0: # <<<<<<<<<<<<<< + * new_shape = 0 + * + */ } - __pyx_L22:; - /* "View.MemoryView":841 + /* "View.MemoryView":870 * * * dst.strides[new_ndim] = stride * step # <<<<<<<<<<<<<< @@ -14665,7 +16918,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ (__pyx_v_dst->strides[__pyx_v_new_ndim]) = (__pyx_v_stride * __pyx_v_step); - /* "View.MemoryView":842 + /* "View.MemoryView":871 * * dst.strides[new_ndim] = stride * step * dst.shape[new_ndim] = new_shape # <<<<<<<<<<<<<< @@ -14674,7 +16927,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ (__pyx_v_dst->shape[__pyx_v_new_ndim]) = __pyx_v_new_shape; - /* "View.MemoryView":843 + /* "View.MemoryView":872 * dst.strides[new_ndim] = stride * step * dst.shape[new_ndim] = new_shape * dst.suboffsets[new_ndim] = suboffset # <<<<<<<<<<<<<< @@ -14685,7 +16938,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, } __pyx_L3:; - /* "View.MemoryView":846 + /* "View.MemoryView":875 * * * if suboffset_dim[0] < 0: # <<<<<<<<<<<<<< @@ -14695,7 +16948,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = (((__pyx_v_suboffset_dim[0]) < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":847 + /* "View.MemoryView":876 * * if suboffset_dim[0] < 0: * dst.data += start * stride # <<<<<<<<<<<<<< @@ -14703,23 +16956,31 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * dst.suboffsets[suboffset_dim[0]] += start * stride */ __pyx_v_dst->data = (__pyx_v_dst->data + (__pyx_v_start * __pyx_v_stride)); + + /* "View.MemoryView":875 + * + * + * if suboffset_dim[0] < 0: # <<<<<<<<<<<<<< + * dst.data += start * stride + * else: + */ goto __pyx_L23; } - /*else*/ { - /* "View.MemoryView":849 + /* "View.MemoryView":878 * dst.data += start * stride * else: * dst.suboffsets[suboffset_dim[0]] += start * stride # <<<<<<<<<<<<<< * * if suboffset >= 0: */ + /*else*/ { __pyx_t_3 = (__pyx_v_suboffset_dim[0]); (__pyx_v_dst->suboffsets[__pyx_t_3]) = ((__pyx_v_dst->suboffsets[__pyx_t_3]) + (__pyx_v_start * __pyx_v_stride)); } __pyx_L23:; - /* "View.MemoryView":851 + /* "View.MemoryView":880 * dst.suboffsets[suboffset_dim[0]] += start * stride * * if suboffset >= 0: # <<<<<<<<<<<<<< @@ -14729,7 +16990,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_suboffset >= 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":852 + /* "View.MemoryView":881 * * if suboffset >= 0: * if not is_slice: # <<<<<<<<<<<<<< @@ -14739,7 +17000,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((!(__pyx_v_is_slice != 0)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":853 + /* "View.MemoryView":882 * if suboffset >= 0: * if not is_slice: * if new_ndim == 0: # <<<<<<<<<<<<<< @@ -14749,7 +17010,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_new_ndim == 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":854 + /* "View.MemoryView":883 * if not is_slice: * if new_ndim == 0: * dst.data = (<char **> dst.data)[0] + suboffset # <<<<<<<<<<<<<< @@ -14757,39 +17018,69 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * _err_dim(IndexError, "All dimensions preceding dimension %d " */ __pyx_v_dst->data = ((((char **)__pyx_v_dst->data)[0]) + __pyx_v_suboffset); + + /* "View.MemoryView":882 + * if suboffset >= 0: + * if not is_slice: + * if new_ndim == 0: # <<<<<<<<<<<<<< + * dst.data = (<char **> dst.data)[0] + suboffset + * else: + */ goto __pyx_L26; } - /*else*/ { - /* "View.MemoryView":856 + /* "View.MemoryView":885 * dst.data = (<char **> dst.data)[0] + suboffset * else: * _err_dim(IndexError, "All dimensions preceding dimension %d " # <<<<<<<<<<<<<< * "must be indexed and not sliced", dim) * else: */ - __pyx_t_3 = __pyx_memoryview_err_dim(__pyx_builtin_IndexError, __pyx_k_All_dimensions_preceding_dimensi, __pyx_v_dim); if (unlikely(__pyx_t_3 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 856; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + /*else*/ { + + /* "View.MemoryView":886 + * else: + * _err_dim(IndexError, "All dimensions preceding dimension %d " + * "must be indexed and not sliced", dim) # <<<<<<<<<<<<<< + * else: + * suboffset_dim[0] = new_ndim + */ + __pyx_t_3 = __pyx_memoryview_err_dim(__pyx_builtin_IndexError, ((char *)"All dimensions preceding dimension %d must be indexed and not sliced"), __pyx_v_dim); if (unlikely(__pyx_t_3 == -1)) __PYX_ERR(2, 885, __pyx_L1_error) } __pyx_L26:; + + /* "View.MemoryView":881 + * + * if suboffset >= 0: + * if not is_slice: # <<<<<<<<<<<<<< + * if new_ndim == 0: + * dst.data = (<char **> dst.data)[0] + suboffset + */ goto __pyx_L25; } - /*else*/ { - /* "View.MemoryView":859 + /* "View.MemoryView":888 * "must be indexed and not sliced", dim) * else: * suboffset_dim[0] = new_ndim # <<<<<<<<<<<<<< * * return 0 */ + /*else*/ { (__pyx_v_suboffset_dim[0]) = __pyx_v_new_ndim; } __pyx_L25:; - goto __pyx_L24; + + /* "View.MemoryView":880 + * dst.suboffsets[suboffset_dim[0]] += start * stride + * + * if suboffset >= 0: # <<<<<<<<<<<<<< + * if not is_slice: + * if new_ndim == 0: + */ } - __pyx_L24:; - /* "View.MemoryView":861 + /* "View.MemoryView":890 * suboffset_dim[0] = new_ndim * * return 0 # <<<<<<<<<<<<<< @@ -14799,7 +17090,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_r = 0; goto __pyx_L0; - /* "View.MemoryView":764 + /* "View.MemoryView":793 * * @cname('__pyx_memoryview_slice_memviewslice') * cdef int slice_memviewslice( # <<<<<<<<<<<<<< @@ -14823,7 +17114,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, return __pyx_r; } -/* "View.MemoryView":867 +/* "View.MemoryView":896 * * @cname('__pyx_pybuffer_index') * cdef char *pybuffer_index(Py_buffer *view, char *bufp, Py_ssize_t index, # <<<<<<<<<<<<<< @@ -14843,21 +17134,18 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P int __pyx_t_2; PyObject *__pyx_t_3 = NULL; PyObject *__pyx_t_4 = NULL; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; __Pyx_RefNannySetupContext("pybuffer_index", 0); - /* "View.MemoryView":869 + /* "View.MemoryView":898 * cdef char *pybuffer_index(Py_buffer *view, char *bufp, Py_ssize_t index, * Py_ssize_t dim) except NULL: * cdef Py_ssize_t shape, stride, suboffset = -1 # <<<<<<<<<<<<<< * cdef Py_ssize_t itemsize = view.itemsize * cdef char *resultp */ - __pyx_v_suboffset = -1; + __pyx_v_suboffset = -1L; - /* "View.MemoryView":870 + /* "View.MemoryView":899 * Py_ssize_t dim) except NULL: * cdef Py_ssize_t shape, stride, suboffset = -1 * cdef Py_ssize_t itemsize = view.itemsize # <<<<<<<<<<<<<< @@ -14867,7 +17155,7 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P __pyx_t_1 = __pyx_v_view->itemsize; __pyx_v_itemsize = __pyx_t_1; - /* "View.MemoryView":873 + /* "View.MemoryView":902 * cdef char *resultp * * if view.ndim == 0: # <<<<<<<<<<<<<< @@ -14877,7 +17165,7 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P __pyx_t_2 = ((__pyx_v_view->ndim == 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":874 + /* "View.MemoryView":903 * * if view.ndim == 0: * shape = view.len / itemsize # <<<<<<<<<<<<<< @@ -14885,28 +17173,16 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P * else: */ if (unlikely(__pyx_v_itemsize == 0)) { - #ifdef WITH_THREAD - PyGILState_STATE __pyx_gilstate_save = PyGILState_Ensure(); - #endif PyErr_SetString(PyExc_ZeroDivisionError, "integer division or modulo by zero"); - #ifdef WITH_THREAD - PyGILState_Release(__pyx_gilstate_save); - #endif - {__pyx_filename = __pyx_f[2]; __pyx_lineno = 874; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __PYX_ERR(2, 903, __pyx_L1_error) } - else if (sizeof(Py_ssize_t) == sizeof(long) && unlikely(__pyx_v_itemsize == -1) && unlikely(UNARY_NEG_WOULD_OVERFLOW(__pyx_v_view->len))) { - #ifdef WITH_THREAD - PyGILState_STATE __pyx_gilstate_save = PyGILState_Ensure(); - #endif + else if (sizeof(Py_ssize_t) == sizeof(long) && (!(((Py_ssize_t)-1) > 0)) && unlikely(__pyx_v_itemsize == (Py_ssize_t)-1) && unlikely(UNARY_NEG_WOULD_OVERFLOW(__pyx_v_view->len))) { PyErr_SetString(PyExc_OverflowError, "value too large to perform division"); - #ifdef WITH_THREAD - PyGILState_Release(__pyx_gilstate_save); - #endif - {__pyx_filename = __pyx_f[2]; __pyx_lineno = 874; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __PYX_ERR(2, 903, __pyx_L1_error) } __pyx_v_shape = __Pyx_div_Py_ssize_t(__pyx_v_view->len, __pyx_v_itemsize); - /* "View.MemoryView":875 + /* "View.MemoryView":904 * if view.ndim == 0: * shape = view.len / itemsize * stride = itemsize # <<<<<<<<<<<<<< @@ -14914,20 +17190,28 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P * shape = view.shape[dim] */ __pyx_v_stride = __pyx_v_itemsize; + + /* "View.MemoryView":902 + * cdef char *resultp + * + * if view.ndim == 0: # <<<<<<<<<<<<<< + * shape = view.len / itemsize + * stride = itemsize + */ goto __pyx_L3; } - /*else*/ { - /* "View.MemoryView":877 + /* "View.MemoryView":906 * stride = itemsize * else: * shape = view.shape[dim] # <<<<<<<<<<<<<< * stride = view.strides[dim] * if view.suboffsets != NULL: */ + /*else*/ { __pyx_v_shape = (__pyx_v_view->shape[__pyx_v_dim]); - /* "View.MemoryView":878 + /* "View.MemoryView":907 * else: * shape = view.shape[dim] * stride = view.strides[dim] # <<<<<<<<<<<<<< @@ -14936,7 +17220,7 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P */ __pyx_v_stride = (__pyx_v_view->strides[__pyx_v_dim]); - /* "View.MemoryView":879 + /* "View.MemoryView":908 * shape = view.shape[dim] * stride = view.strides[dim] * if view.suboffsets != NULL: # <<<<<<<<<<<<<< @@ -14946,7 +17230,7 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P __pyx_t_2 = ((__pyx_v_view->suboffsets != NULL) != 0); if (__pyx_t_2) { - /* "View.MemoryView":880 + /* "View.MemoryView":909 * stride = view.strides[dim] * if view.suboffsets != NULL: * suboffset = view.suboffsets[dim] # <<<<<<<<<<<<<< @@ -14954,13 +17238,19 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P * if index < 0: */ __pyx_v_suboffset = (__pyx_v_view->suboffsets[__pyx_v_dim]); - goto __pyx_L4; + + /* "View.MemoryView":908 + * shape = view.shape[dim] + * stride = view.strides[dim] + * if view.suboffsets != NULL: # <<<<<<<<<<<<<< + * suboffset = view.suboffsets[dim] + * + */ } - __pyx_L4:; } __pyx_L3:; - /* "View.MemoryView":882 + /* "View.MemoryView":911 * suboffset = view.suboffsets[dim] * * if index < 0: # <<<<<<<<<<<<<< @@ -14970,7 +17260,7 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P __pyx_t_2 = ((__pyx_v_index < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":883 + /* "View.MemoryView":912 * * if index < 0: * index += view.shape[dim] # <<<<<<<<<<<<<< @@ -14979,7 +17269,7 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P */ __pyx_v_index = (__pyx_v_index + (__pyx_v_view->shape[__pyx_v_dim])); - /* "View.MemoryView":884 + /* "View.MemoryView":913 * if index < 0: * index += view.shape[dim] * if index < 0: # <<<<<<<<<<<<<< @@ -14989,35 +17279,49 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P __pyx_t_2 = ((__pyx_v_index < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":885 + /* "View.MemoryView":914 * index += 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__LINE__; goto __pyx_L1_error;} + /*else*/ { + __pyx_t_3 = __pyx_memoryview_assign_item_from_object(((struct __pyx_memoryview_obj *)__pyx_v_self), __pyx_v_itemp, __pyx_v_value); if (unlikely(!__pyx_t_3)) __PYX_ERR(2, 975, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; } __pyx_L3:; - /* "View.MemoryView":942 + /* "View.MemoryView":971 * return memoryview.convert_item_to_object(self, itemp) * * cdef assign_item_from_object(self, char *itemp, object value): # <<<<<<<<<<<<<< @@ -15475,36 +17806,36 @@ static PyObject *__pyx_memoryviewslice_assign_item_from_object(struct __pyx_memo return __pyx_r; } -/* "View.MemoryView":950 - * property base: - * @cname('__pyx_memoryviewslice__get__base') - * def __get__(self): # <<<<<<<<<<<<<< - * return self.from_object +/* "View.MemoryView":978 + * + * @property + * def base(self): # <<<<<<<<<<<<<< + * return self.from_object * */ /* Python wrapper */ -static PyObject *__pyx_memoryviewslice__get__base(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryviewslice__get__base(PyObject *__pyx_v_self) { +static PyObject *__pyx_pw_15View_dot_MemoryView_16_memoryviewslice_4base_1__get__(PyObject *__pyx_v_self); /*proto*/ +static PyObject *__pyx_pw_15View_dot_MemoryView_16_memoryviewslice_4base_1__get__(PyObject *__pyx_v_self) { PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("__get__ (wrapper)", 0); - __pyx_r = __pyx_memoryviewslice__get__base_MemoryView_16_memoryviewslice_4base___get__(((struct __pyx_memoryviewslice_obj *)__pyx_v_self)); + __pyx_r = __pyx_pf_15View_dot_MemoryView_16_memoryviewslice_4base___get__(((struct __pyx_memoryviewslice_obj *)__pyx_v_self)); /* function exit code */ __Pyx_RefNannyFinishContext(); return __pyx_r; } -static PyObject *__pyx_memoryviewslice__get__base_MemoryView_16_memoryviewslice_4base___get__(struct __pyx_memoryviewslice_obj *__pyx_v_self) { +static PyObject *__pyx_pf_15View_dot_MemoryView_16_memoryviewslice_4base___get__(struct __pyx_memoryviewslice_obj *__pyx_v_self) { PyObject *__pyx_r = NULL; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("__get__", 0); - /* "View.MemoryView":951 - * @cname('__pyx_memoryviewslice__get__base') - * def __get__(self): - * return self.from_object # <<<<<<<<<<<<<< + /* "View.MemoryView":979 + * @property + * def base(self): + * return self.from_object # <<<<<<<<<<<<<< * * __pyx_getbuffer = capsule(<void *> &__pyx_memoryview_getbuffer, "getbuffer(obj, view, flags)") */ @@ -15513,11 +17844,11 @@ static PyObject *__pyx_memoryviewslice__get__base_MemoryView_16_memoryviewslice_ __pyx_r = __pyx_v_self->from_object; goto __pyx_L0; - /* "View.MemoryView":950 - * property base: - * @cname('__pyx_memoryviewslice__get__base') - * def __get__(self): # <<<<<<<<<<<<<< - * return self.from_object + /* "View.MemoryView":978 + * + * @property + * def base(self): # <<<<<<<<<<<<<< + * return self.from_object * */ @@ 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__pyx_L0; + + /* "View.MemoryView":993 + * cdef _memoryviewslice result + * + * if <PyObject *> memviewslice.memview == Py_None: # <<<<<<<<<<<<<< + * return None + * + */ } - /* "View.MemoryView":972 + /* "View.MemoryView":999 * * * result = _memoryviewslice(None, 0, dtype_is_object) # <<<<<<<<<<<<<< * * result.from_slice = memviewslice */ - __pyx_t_2 = __Pyx_PyBool_FromLong(__pyx_v_dtype_is_object); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 972; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = __Pyx_PyBool_FromLong(__pyx_v_dtype_is_object); if (unlikely(!__pyx_t_2)) __PYX_ERR(2, 999, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_2); - __pyx_t_3 = PyTuple_New(3); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 972; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyTuple_New(3); if (unlikely(!__pyx_t_3)) __PYX_ERR(2, 999, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_3); __Pyx_INCREF(Py_None); - PyTuple_SET_ITEM(__pyx_t_3, 0, 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__Pyx_PyObject_GetAttrStr(((PyObject *)__pyx_v_memviewslice.memview), __pyx_n_s_base); if (unlikely(!__pyx_t_2)) __PYX_ERR(2, 1004, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_2); __Pyx_GIVEREF(__pyx_t_2); __Pyx_GOTREF(__pyx_v_result->from_object); @@ -15636,7 +17974,7 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl __pyx_v_result->from_object = __pyx_t_2; __pyx_t_2 = 0; - /* "View.MemoryView":978 + /* "View.MemoryView":1005 * * result.from_object = (<memoryview> memviewslice.memview).base * result.typeinfo = memviewslice.memview.typeinfo # <<<<<<<<<<<<<< @@ -15646,7 +17984,7 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl __pyx_t_4 = __pyx_v_memviewslice.memview->typeinfo; __pyx_v_result->__pyx_base.typeinfo = __pyx_t_4; - /* "View.MemoryView":980 + /* "View.MemoryView":1007 * result.typeinfo = memviewslice.memview.typeinfo * * result.view = memviewslice.memview.view # <<<<<<<<<<<<<< @@ -15656,7 +17994,7 @@ static 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result.view.suboffsets = <Py_ssize_t *> result.from_slice.suboffsets # <<<<<<<<<<<<<< + * break + * + */ + __pyx_v_result->__pyx_base.view.suboffsets = ((Py_ssize_t *)__pyx_v_result->from_slice.suboffsets); + + /* "View.MemoryView":1023 + * if suboffset >= 0: + * result.view.suboffsets = <Py_ssize_t *> result.from_slice.suboffsets + * break # <<<<<<<<<<<<<< * * result.view.len = result.view.itemsize */ - __pyx_v_result->__pyx_base.view.suboffsets = ((Py_ssize_t *)__pyx_v_result->from_slice.suboffsets); + goto __pyx_L5_break; - /* "View.MemoryView":992 - * result.view.suboffsets = <Py_ssize_t *> result.from_slice.suboffsets + /* "View.MemoryView":1021 + * result.view.suboffsets = NULL + * for suboffset in result.from_slice.suboffsets[:ndim]: + * if suboffset >= 0: # <<<<<<<<<<<<<< + * result.view.suboffsets = <Py_ssize_t *> result.from_slice.suboffsets + * break + */ + } + } + __pyx_L5_break:; + + /* "View.MemoryView":1025 + * break * * result.view.len = result.view.itemsize # 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__pyx_t_9 = __Pyx_PyIndex_AsSsize_t(__pyx_t_3); if (unlikely((__pyx_t_9 == (Py_ssize_t)-1) && PyErr_Occurred())) __PYX_ERR(2, 1027, __pyx_L1_error) + __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; + __pyx_v_result->__pyx_base.view.len = __pyx_t_9; } - /* "View.MemoryView":996 - * result.view.len *= result.view.shape[i] + /* "View.MemoryView":1029 + * result.view.len *= length * * result.to_object_func = to_object_func # <<<<<<<<<<<<<< * result.to_dtype_func = to_dtype_func @@ -15768,7 +18168,7 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl */ __pyx_v_result->to_object_func = __pyx_v_to_object_func; - /* "View.MemoryView":997 + /* "View.MemoryView":1030 * * result.to_object_func = to_object_func * result.to_dtype_func = to_dtype_func # <<<<<<<<<<<<<< @@ -15777,7 +18177,7 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl */ __pyx_v_result->to_dtype_func = __pyx_v_to_dtype_func; - /* "View.MemoryView":999 + /* 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*__pyx_memoryview_get_slice_from_memoryview(struct __p int __pyx_t_1; int __pyx_t_2; PyObject *__pyx_t_3 = NULL; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; __Pyx_RefNannySetupContext("get_slice_from_memview", 0); - /* "View.MemoryView":1005 + /* "View.MemoryView":1038 * __Pyx_memviewslice *mslice): * cdef _memoryviewslice obj * if isinstance(memview, _memoryviewslice): # <<<<<<<<<<<<<< * obj = memview * return &obj.from_slice */ - __pyx_t_1 = __Pyx_TypeCheck(((PyObject *)__pyx_v_memview), ((PyObject *)__pyx_memoryviewslice_type)); + __pyx_t_1 = __Pyx_TypeCheck(((PyObject *)__pyx_v_memview), __pyx_memoryviewslice_type); __pyx_t_2 = (__pyx_t_1 != 0); if (__pyx_t_2) { - /* "View.MemoryView":1006 + /* "View.MemoryView":1039 * cdef _memoryviewslice obj * if isinstance(memview, _memoryviewslice): * obj = memview # <<<<<<<<<<<<<< * return &obj.from_slice * else: */ - if (!(likely(((((PyObject *)__pyx_v_memview)) == Py_None) || likely(__Pyx_TypeTest(((PyObject *)__pyx_v_memview), __pyx_memoryviewslice_type))))) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1006; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((((PyObject *)__pyx_v_memview)) == Py_None) || likely(__Pyx_TypeTest(((PyObject *)__pyx_v_memview), __pyx_memoryviewslice_type))))) __PYX_ERR(2, 1039, __pyx_L1_error) __pyx_t_3 = ((PyObject *)__pyx_v_memview); __Pyx_INCREF(__pyx_t_3); __pyx_v_obj = ((struct __pyx_memoryviewslice_obj *)__pyx_t_3); __pyx_t_3 = 0; - /* "View.MemoryView":1007 + /* "View.MemoryView":1040 * if isinstance(memview, _memoryviewslice): * obj = memview * return &obj.from_slice # <<<<<<<<<<<<<< @@ -15863,19 +18261,27 @@ static __Pyx_memviewslice *__pyx_memoryview_get_slice_from_memoryview(struct __p */ __pyx_r = (&__pyx_v_obj->from_slice); goto __pyx_L0; + + /* "View.MemoryView":1038 + * __Pyx_memviewslice *mslice): + * cdef _memoryviewslice obj + * if isinstance(memview, _memoryviewslice): # <<<<<<<<<<<<<< + * obj = memview + * return &obj.from_slice + */ } - /*else*/ { - /* "View.MemoryView":1009 + /* "View.MemoryView":1042 * return &obj.from_slice * else: * slice_copy(memview, mslice) # <<<<<<<<<<<<<< * return mslice * */ + /*else*/ { __pyx_memoryview_slice_copy(__pyx_v_memview, __pyx_v_mslice); - /* "View.MemoryView":1010 + /* "View.MemoryView":1043 * else: * slice_copy(memview, mslice) * return mslice # <<<<<<<<<<<<<< @@ -15886,7 +18292,7 @@ static __Pyx_memviewslice *__pyx_memoryview_get_slice_from_memoryview(struct __p goto __pyx_L0; } - /* "View.MemoryView":1002 + /* "View.MemoryView":1035 * * @cname('__pyx_memoryview_get_slice_from_memoryview') * cdef __Pyx_memviewslice *get_slice_from_memview(memoryview memview, # <<<<<<<<<<<<<< @@ -15897,7 +18303,7 @@ static __Pyx_memviewslice *__pyx_memoryview_get_slice_from_memoryview(struct __p /* function exit code */ __pyx_L1_error:; __Pyx_XDECREF(__pyx_t_3); - __Pyx_WriteUnraisable("View.MemoryView.get_slice_from_memview", __pyx_clineno, __pyx_lineno, __pyx_filename, 0); + __Pyx_WriteUnraisable("View.MemoryView.get_slice_from_memview", __pyx_clineno, __pyx_lineno, __pyx_filename, 0, 0); __pyx_r = 0; __pyx_L0:; __Pyx_XDECREF((PyObject *)__pyx_v_obj); @@ -15905,7 +18311,7 @@ static __Pyx_memviewslice *__pyx_memoryview_get_slice_from_memoryview(struct __p return __pyx_r; } -/* "View.MemoryView":1013 +/* "View.MemoryView":1046 * * @cname('__pyx_memoryview_slice_copy') * cdef void slice_copy(memoryview memview, __Pyx_memviewslice *dst): # <<<<<<<<<<<<<< @@ -15922,10 +18328,10 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem Py_ssize_t *__pyx_t_1; int __pyx_t_2; int __pyx_t_3; - int __pyx_t_4; + Py_ssize_t __pyx_t_4; __Pyx_RefNannySetupContext("slice_copy", 0); - /* "View.MemoryView":1017 + /* "View.MemoryView":1050 * cdef (Py_ssize_t*) shape, strides, suboffsets * * shape = memview.view.shape # <<<<<<<<<<<<<< @@ -15935,7 +18341,7 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem __pyx_t_1 = __pyx_v_memview->view.shape; __pyx_v_shape = __pyx_t_1; - /* "View.MemoryView":1018 + /* "View.MemoryView":1051 * * shape = memview.view.shape * strides = memview.view.strides # <<<<<<<<<<<<<< @@ -15945,7 +18351,7 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem __pyx_t_1 = __pyx_v_memview->view.strides; __pyx_v_strides = __pyx_t_1; - /* "View.MemoryView":1019 + /* "View.MemoryView":1052 * shape = memview.view.shape * strides = memview.view.strides * suboffsets = memview.view.suboffsets # <<<<<<<<<<<<<< @@ -15955,7 +18361,7 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem __pyx_t_1 = __pyx_v_memview->view.suboffsets; __pyx_v_suboffsets = __pyx_t_1; - /* "View.MemoryView":1021 + /* "View.MemoryView":1054 * suboffsets = memview.view.suboffsets * * dst.memview = <__pyx_memoryview *> memview # <<<<<<<<<<<<<< @@ -15964,7 +18370,7 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem */ __pyx_v_dst->memview = ((struct __pyx_memoryview_obj *)__pyx_v_memview); - /* "View.MemoryView":1022 + /* "View.MemoryView":1055 * * dst.memview = <__pyx_memoryview *> memview * dst.data = <char *> memview.view.buf # <<<<<<<<<<<<<< @@ -15973,7 +18379,7 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem */ __pyx_v_dst->data = ((char *)__pyx_v_memview->view.buf); - /* "View.MemoryView":1024 + /* "View.MemoryView":1057 * dst.data = <char *> memview.view.buf * * for dim in range(memview.view.ndim): # <<<<<<<<<<<<<< @@ -15984,59 +18390,40 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { __pyx_v_dim = __pyx_t_3; - /* "View.MemoryView":1025 + /* "View.MemoryView":1058 * * for dim in range(memview.view.ndim): * dst.shape[dim] = shape[dim] # <<<<<<<<<<<<<< * dst.strides[dim] = strides[dim] - * if suboffsets == NULL: + * dst.suboffsets[dim] = suboffsets[dim] if suboffsets else -1 */ (__pyx_v_dst->shape[__pyx_v_dim]) = (__pyx_v_shape[__pyx_v_dim]); - /* "View.MemoryView":1026 + /* "View.MemoryView":1059 * for dim in range(memview.view.ndim): * dst.shape[dim] = shape[dim] * dst.strides[dim] = strides[dim] # <<<<<<<<<<<<<< - * if suboffsets == NULL: - * dst.suboffsets[dim] = -1 + * dst.suboffsets[dim] = suboffsets[dim] if suboffsets else -1 + * */ (__pyx_v_dst->strides[__pyx_v_dim]) = (__pyx_v_strides[__pyx_v_dim]); - /* "View.MemoryView":1027 + /* "View.MemoryView":1060 * dst.shape[dim] = shape[dim] * dst.strides[dim] = strides[dim] - * if suboffsets == NULL: # <<<<<<<<<<<<<< - * dst.suboffsets[dim] = -1 - * else: - */ - __pyx_t_4 = ((__pyx_v_suboffsets == NULL) != 0); - if (__pyx_t_4) { - - /* "View.MemoryView":1028 - * dst.strides[dim] = strides[dim] - * if suboffsets == NULL: - * dst.suboffsets[dim] = -1 # <<<<<<<<<<<<<< - * else: - * dst.suboffsets[dim] = suboffsets[dim] - */ - (__pyx_v_dst->suboffsets[__pyx_v_dim]) = -1; - goto __pyx_L5; - } - /*else*/ { - - /* "View.MemoryView":1030 - * dst.suboffsets[dim] = -1 - * else: - * dst.suboffsets[dim] = suboffsets[dim] # <<<<<<<<<<<<<< + * dst.suboffsets[dim] = suboffsets[dim] if suboffsets else -1 # <<<<<<<<<<<<<< * * @cname('__pyx_memoryview_copy_object') */ - (__pyx_v_dst->suboffsets[__pyx_v_dim]) = (__pyx_v_suboffsets[__pyx_v_dim]); + if ((__pyx_v_suboffsets != 0)) { + __pyx_t_4 = (__pyx_v_suboffsets[__pyx_v_dim]); + } else { + __pyx_t_4 = -1L; } - __pyx_L5:; + (__pyx_v_dst->suboffsets[__pyx_v_dim]) = __pyx_t_4; } - /* "View.MemoryView":1013 + /* "View.MemoryView":1046 * * @cname('__pyx_memoryview_slice_copy') * cdef void slice_copy(memoryview memview, __Pyx_memviewslice *dst): # <<<<<<<<<<<<<< @@ -16048,7 +18435,7 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem __Pyx_RefNannyFinishContext(); } -/* "View.MemoryView":1033 +/* "View.MemoryView":1063 * * @cname('__pyx_memoryview_copy_object') * cdef memoryview_copy(memoryview memview): # <<<<<<<<<<<<<< @@ -16061,12 +18448,9 @@ static PyObject *__pyx_memoryview_copy_object(struct __pyx_memoryview_obj *__pyx PyObject *__pyx_r = NULL; __Pyx_RefNannyDeclarations PyObject *__pyx_t_1 = NULL; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; __Pyx_RefNannySetupContext("memoryview_copy", 0); - /* "View.MemoryView":1036 + /* "View.MemoryView":1066 * "Create a new memoryview object" * cdef __Pyx_memviewslice memviewslice * slice_copy(memview, &memviewslice) # <<<<<<<<<<<<<< @@ -16075,7 +18459,7 @@ static PyObject *__pyx_memoryview_copy_object(struct __pyx_memoryview_obj *__pyx */ __pyx_memoryview_slice_copy(__pyx_v_memview, (&__pyx_v_memviewslice)); - /* "View.MemoryView":1037 + /* "View.MemoryView":1067 * cdef __Pyx_memviewslice memviewslice * slice_copy(memview, &memviewslice) * return memoryview_copy_from_slice(memview, &memviewslice) # <<<<<<<<<<<<<< @@ -16083,13 +18467,13 @@ static PyObject *__pyx_memoryview_copy_object(struct __pyx_memoryview_obj *__pyx * @cname('__pyx_memoryview_copy_object_from_slice') */ __Pyx_XDECREF(__pyx_r); - __pyx_t_1 = __pyx_memoryview_copy_object_from_slice(__pyx_v_memview, (&__pyx_v_memviewslice)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1037; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __pyx_memoryview_copy_object_from_slice(__pyx_v_memview, (&__pyx_v_memviewslice)); if (unlikely(!__pyx_t_1)) __PYX_ERR(2, 1067, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); __pyx_r = __pyx_t_1; __pyx_t_1 = 0; goto __pyx_L0; - /* "View.MemoryView":1033 + /* "View.MemoryView":1063 * * @cname('__pyx_memoryview_copy_object') * cdef memoryview_copy(memoryview memview): # <<<<<<<<<<<<<< @@ -16108,7 +18492,7 @@ static PyObject *__pyx_memoryview_copy_object(struct __pyx_memoryview_obj *__pyx return __pyx_r; } -/* "View.MemoryView":1040 +/* "View.MemoryView":1070 * * @cname('__pyx_memoryview_copy_object_from_slice') * cdef memoryview_copy_from_slice(memoryview memview, __Pyx_memviewslice *memviewslice): # <<<<<<<<<<<<<< @@ -16126,23 +18510,20 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview PyObject *(*__pyx_t_3)(char *); int (*__pyx_t_4)(char *, PyObject *); PyObject *__pyx_t_5 = NULL; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; __Pyx_RefNannySetupContext("memoryview_copy_from_slice", 0); - /* "View.MemoryView":1047 + /* "View.MemoryView":1077 * cdef int (*to_dtype_func)(char *, object) except 0 * * if isinstance(memview, _memoryviewslice): # <<<<<<<<<<<<<< * to_object_func = (<_memoryviewslice> memview).to_object_func * to_dtype_func = (<_memoryviewslice> memview).to_dtype_func */ - __pyx_t_1 = __Pyx_TypeCheck(((PyObject *)__pyx_v_memview), ((PyObject *)__pyx_memoryviewslice_type)); + __pyx_t_1 = __Pyx_TypeCheck(((PyObject *)__pyx_v_memview), __pyx_memoryviewslice_type); __pyx_t_2 = (__pyx_t_1 != 0); if (__pyx_t_2) { - /* "View.MemoryView":1048 + /* "View.MemoryView":1078 * * if isinstance(memview, _memoryviewslice): * to_object_func = (<_memoryviewslice> memview).to_object_func # <<<<<<<<<<<<<< @@ -16152,7 +18533,7 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview __pyx_t_3 = ((struct __pyx_memoryviewslice_obj *)__pyx_v_memview)->to_object_func; __pyx_v_to_object_func = __pyx_t_3; - /* "View.MemoryView":1049 + /* "View.MemoryView":1079 * if isinstance(memview, _memoryviewslice): * to_object_func = (<_memoryviewslice> memview).to_object_func * to_dtype_func = (<_memoryviewslice> memview).to_dtype_func # <<<<<<<<<<<<<< @@ -16161,20 +18542,28 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview */ __pyx_t_4 = ((struct __pyx_memoryviewslice_obj *)__pyx_v_memview)->to_dtype_func; __pyx_v_to_dtype_func = __pyx_t_4; + + /* "View.MemoryView":1077 + * cdef int (*to_dtype_func)(char *, object) except 0 + * + * if isinstance(memview, _memoryviewslice): # <<<<<<<<<<<<<< + * to_object_func = (<_memoryviewslice> memview).to_object_func + * to_dtype_func = (<_memoryviewslice> memview).to_dtype_func + */ goto __pyx_L3; } - /*else*/ { - /* "View.MemoryView":1051 + /* "View.MemoryView":1081 * to_dtype_func = (<_memoryviewslice> memview).to_dtype_func * else: * to_object_func = NULL # <<<<<<<<<<<<<< * to_dtype_func = NULL * */ + /*else*/ { __pyx_v_to_object_func = NULL; - /* "View.MemoryView":1052 + /* "View.MemoryView":1082 * else: * to_object_func = NULL * to_dtype_func = NULL # <<<<<<<<<<<<<< @@ -16185,7 +18574,7 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview } __pyx_L3:; - /* "View.MemoryView":1054 + /* "View.MemoryView":1084 * to_dtype_func = NULL * * return memoryview_fromslice(memviewslice[0], memview.view.ndim, # <<<<<<<<<<<<<< @@ -16194,20 +18583,20 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview */ __Pyx_XDECREF(__pyx_r); - /* "View.MemoryView":1056 + /* "View.MemoryView":1086 * return memoryview_fromslice(memviewslice[0], memview.view.ndim, * to_object_func, to_dtype_func, * memview.dtype_is_object) # <<<<<<<<<<<<<< * * */ - __pyx_t_5 = __pyx_memoryview_fromslice((__pyx_v_memviewslice[0]), __pyx_v_memview->view.ndim, __pyx_v_to_object_func, __pyx_v_to_dtype_func, __pyx_v_memview->dtype_is_object); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1054; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __pyx_memoryview_fromslice((__pyx_v_memviewslice[0]), __pyx_v_memview->view.ndim, __pyx_v_to_object_func, __pyx_v_to_dtype_func, __pyx_v_memview->dtype_is_object); if (unlikely(!__pyx_t_5)) __PYX_ERR(2, 1084, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_5); __pyx_r = __pyx_t_5; __pyx_t_5 = 0; goto __pyx_L0; - /* "View.MemoryView":1040 + /* "View.MemoryView":1070 * * @cname('__pyx_memoryview_copy_object_from_slice') * cdef memoryview_copy_from_slice(memoryview memview, __Pyx_memviewslice *memviewslice): # <<<<<<<<<<<<<< @@ -16226,7 +18615,7 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview return __pyx_r; } -/* "View.MemoryView":1062 +/* "View.MemoryView":1092 * * * cdef Py_ssize_t abs_py_ssize_t(Py_ssize_t arg) nogil: # <<<<<<<<<<<<<< @@ -16238,7 +18627,7 @@ static Py_ssize_t abs_py_ssize_t(Py_ssize_t __pyx_v_arg) { Py_ssize_t __pyx_r; int __pyx_t_1; - /* "View.MemoryView":1063 + /* "View.MemoryView":1093 * * cdef Py_ssize_t abs_py_ssize_t(Py_ssize_t arg) nogil: * if arg < 0: # <<<<<<<<<<<<<< @@ -16248,7 +18637,7 @@ static Py_ssize_t abs_py_ssize_t(Py_ssize_t __pyx_v_arg) { __pyx_t_1 = ((__pyx_v_arg < 0) != 0); if (__pyx_t_1) { - /* "View.MemoryView":1064 + /* "View.MemoryView":1094 * cdef Py_ssize_t abs_py_ssize_t(Py_ssize_t arg) nogil: * if arg < 0: * return -arg # <<<<<<<<<<<<<< @@ -16257,21 +18646,29 @@ static Py_ssize_t abs_py_ssize_t(Py_ssize_t __pyx_v_arg) { */ __pyx_r = (-__pyx_v_arg); goto __pyx_L0; + + /* "View.MemoryView":1093 + * + * cdef Py_ssize_t abs_py_ssize_t(Py_ssize_t arg) nogil: + * if arg < 0: # <<<<<<<<<<<<<< + * return -arg + * else: + */ } - /*else*/ { - /* "View.MemoryView":1066 + /* "View.MemoryView":1096 * return -arg * else: * return arg # <<<<<<<<<<<<<< * * @cname('__pyx_get_best_slice_order') */ + /*else*/ { __pyx_r = __pyx_v_arg; goto __pyx_L0; } - /* "View.MemoryView":1062 + /* "View.MemoryView":1092 * * * cdef Py_ssize_t abs_py_ssize_t(Py_ssize_t arg) nogil: # <<<<<<<<<<<<<< @@ -16284,7 +18681,7 @@ static Py_ssize_t abs_py_ssize_t(Py_ssize_t __pyx_v_arg) { return __pyx_r; } -/* "View.MemoryView":1069 +/* "View.MemoryView":1099 * * @cname('__pyx_get_best_slice_order') * cdef char get_best_order(__Pyx_memviewslice *mslice, int ndim) nogil: # <<<<<<<<<<<<<< @@ -16301,7 +18698,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ int __pyx_t_2; int __pyx_t_3; - /* "View.MemoryView":1074 + /* "View.MemoryView":1104 * """ * cdef int i * cdef Py_ssize_t c_stride = 0 # <<<<<<<<<<<<<< @@ -16310,7 +18707,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ */ __pyx_v_c_stride = 0; - /* "View.MemoryView":1075 + /* "View.MemoryView":1105 * cdef int i * cdef Py_ssize_t c_stride = 0 * cdef Py_ssize_t f_stride = 0 # <<<<<<<<<<<<<< @@ -16319,17 +18716,17 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ */ __pyx_v_f_stride = 0; - /* "View.MemoryView":1077 + /* "View.MemoryView":1107 * cdef Py_ssize_t f_stride = 0 * * for i in range(ndim - 1, -1, -1): # <<<<<<<<<<<<<< * if mslice.shape[i] > 1: * c_stride = mslice.strides[i] */ - for (__pyx_t_1 = (__pyx_v_ndim - 1); __pyx_t_1 > -1; __pyx_t_1-=1) { + for (__pyx_t_1 = (__pyx_v_ndim - 1); __pyx_t_1 > -1L; __pyx_t_1-=1) { __pyx_v_i = __pyx_t_1; - /* "View.MemoryView":1078 + /* "View.MemoryView":1108 * * for i in range(ndim - 1, -1, -1): * if mslice.shape[i] > 1: # <<<<<<<<<<<<<< @@ -16339,7 +18736,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ __pyx_t_2 = (((__pyx_v_mslice->shape[__pyx_v_i]) > 1) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1079 + /* "View.MemoryView":1109 * for i in range(ndim - 1, -1, -1): * if mslice.shape[i] > 1: * c_stride = mslice.strides[i] # <<<<<<<<<<<<<< @@ -16348,7 +18745,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ */ __pyx_v_c_stride = (__pyx_v_mslice->strides[__pyx_v_i]); - /* "View.MemoryView":1080 + /* "View.MemoryView":1110 * if mslice.shape[i] > 1: * c_stride = mslice.strides[i] * break # <<<<<<<<<<<<<< @@ -16356,11 +18753,19 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ * for i in range(ndim): */ goto __pyx_L4_break; + + /* "View.MemoryView":1108 + * + * for i in range(ndim - 1, -1, -1): + * if mslice.shape[i] > 1: # <<<<<<<<<<<<<< + * c_stride = mslice.strides[i] + * break + */ } } __pyx_L4_break:; - /* "View.MemoryView":1082 + /* "View.MemoryView":1112 * break * * for i in range(ndim): # <<<<<<<<<<<<<< @@ -16371,7 +18776,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_1; __pyx_t_3+=1) { __pyx_v_i = __pyx_t_3; - /* "View.MemoryView":1083 + /* "View.MemoryView":1113 * * for i in range(ndim): * if mslice.shape[i] > 1: # <<<<<<<<<<<<<< @@ -16381,7 +18786,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ __pyx_t_2 = (((__pyx_v_mslice->shape[__pyx_v_i]) > 1) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1084 + /* "View.MemoryView":1114 * for i in range(ndim): * if mslice.shape[i] > 1: * f_stride = mslice.strides[i] # <<<<<<<<<<<<<< @@ -16390,7 +18795,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ */ __pyx_v_f_stride = (__pyx_v_mslice->strides[__pyx_v_i]); - /* "View.MemoryView":1085 + /* "View.MemoryView":1115 * if mslice.shape[i] > 1: * f_stride = mslice.strides[i] * break # <<<<<<<<<<<<<< @@ -16398,11 +18803,19 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ * if abs_py_ssize_t(c_stride) <= abs_py_ssize_t(f_stride): */ goto __pyx_L7_break; + + /* "View.MemoryView":1113 + * + * for i in range(ndim): + * if mslice.shape[i] > 1: # <<<<<<<<<<<<<< + * f_stride = mslice.strides[i] + * break + */ } } __pyx_L7_break:; - /* "View.MemoryView":1087 + /* "View.MemoryView":1117 * break * * if abs_py_ssize_t(c_stride) <= abs_py_ssize_t(f_stride): # <<<<<<<<<<<<<< @@ -16412,7 +18825,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ __pyx_t_2 = ((abs_py_ssize_t(__pyx_v_c_stride) <= abs_py_ssize_t(__pyx_v_f_stride)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1088 + /* "View.MemoryView":1118 * * if abs_py_ssize_t(c_stride) <= abs_py_ssize_t(f_stride): * return 'C' # <<<<<<<<<<<<<< @@ -16421,21 +18834,29 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ */ __pyx_r = 'C'; goto __pyx_L0; + + /* "View.MemoryView":1117 + * break + * + * if abs_py_ssize_t(c_stride) <= abs_py_ssize_t(f_stride): # <<<<<<<<<<<<<< + * return 'C' + * else: + */ } - /*else*/ { - /* "View.MemoryView":1090 + /* "View.MemoryView":1120 * return 'C' * else: * return 'F' # <<<<<<<<<<<<<< * * @cython.cdivision(True) */ + /*else*/ { __pyx_r = 'F'; goto __pyx_L0; } - /* "View.MemoryView":1069 + /* "View.MemoryView":1099 * * @cname('__pyx_get_best_slice_order') * cdef char get_best_order(__Pyx_memviewslice *mslice, int ndim) nogil: # <<<<<<<<<<<<<< @@ -16448,7 +18869,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ return __pyx_r; } -/* "View.MemoryView":1093 +/* "View.MemoryView":1123 * * @cython.cdivision(True) * cdef void _copy_strided_to_strided(char *src_data, Py_ssize_t *src_strides, # <<<<<<<<<<<<<< @@ -16468,7 +18889,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v Py_ssize_t __pyx_t_4; Py_ssize_t __pyx_t_5; - /* "View.MemoryView":1100 + /* "View.MemoryView":1130 * * cdef Py_ssize_t i * cdef Py_ssize_t src_extent = src_shape[0] # <<<<<<<<<<<<<< @@ -16477,7 +18898,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ __pyx_v_src_extent = (__pyx_v_src_shape[0]); - /* "View.MemoryView":1101 + /* "View.MemoryView":1131 * cdef Py_ssize_t i * cdef Py_ssize_t src_extent = src_shape[0] * cdef Py_ssize_t dst_extent = dst_shape[0] # <<<<<<<<<<<<<< @@ -16486,7 +18907,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ __pyx_v_dst_extent = (__pyx_v_dst_shape[0]); - /* "View.MemoryView":1102 + /* "View.MemoryView":1132 * cdef Py_ssize_t src_extent = src_shape[0] * cdef Py_ssize_t dst_extent = dst_shape[0] * cdef Py_ssize_t src_stride = src_strides[0] # <<<<<<<<<<<<<< @@ -16495,7 +18916,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ __pyx_v_src_stride = (__pyx_v_src_strides[0]); - /* "View.MemoryView":1103 + /* "View.MemoryView":1133 * cdef Py_ssize_t dst_extent = dst_shape[0] * cdef Py_ssize_t src_stride = src_strides[0] * cdef Py_ssize_t dst_stride = dst_strides[0] # <<<<<<<<<<<<<< @@ -16504,7 +18925,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ __pyx_v_dst_stride = (__pyx_v_dst_strides[0]); - /* "View.MemoryView":1105 + /* "View.MemoryView":1135 * cdef Py_ssize_t dst_stride = dst_strides[0] * * if ndim == 1: # <<<<<<<<<<<<<< @@ -16514,7 +18935,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v __pyx_t_1 = ((__pyx_v_ndim == 1) != 0); if (__pyx_t_1) { - /* "View.MemoryView":1106 + /* "View.MemoryView":1136 * * if ndim == 1: * if (src_stride > 0 and dst_stride > 0 and # <<<<<<<<<<<<<< @@ -16534,7 +18955,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v goto __pyx_L5_bool_binop_done; } - /* "View.MemoryView":1107 + /* "View.MemoryView":1137 * if ndim == 1: * if (src_stride > 0 and dst_stride > 0 and * <size_t> src_stride == itemsize == <size_t> dst_stride): # <<<<<<<<<<<<<< @@ -16548,9 +18969,17 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v __pyx_t_3 = (__pyx_t_2 != 0); __pyx_t_1 = __pyx_t_3; __pyx_L5_bool_binop_done:; + + /* "View.MemoryView":1136 + * + * if ndim == 1: + * if (src_stride > 0 and dst_stride > 0 and # <<<<<<<<<<<<<< + * <size_t> src_stride == itemsize == <size_t> dst_stride): + * memcpy(dst_data, src_data, itemsize * dst_extent) + */ if (__pyx_t_1) { - /* "View.MemoryView":1108 + /* "View.MemoryView":1138 * if (src_stride > 0 and dst_stride > 0 and * <size_t> src_stride == itemsize == <size_t> dst_stride): * memcpy(dst_data, src_data, itemsize * dst_extent) # <<<<<<<<<<<<<< @@ -16558,22 +18987,30 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v * for i in range(dst_extent): */ memcpy(__pyx_v_dst_data, __pyx_v_src_data, (__pyx_v_itemsize * __pyx_v_dst_extent)); + + /* "View.MemoryView":1136 + * + * if ndim == 1: + * if (src_stride > 0 and dst_stride > 0 and # <<<<<<<<<<<<<< + * <size_t> src_stride == itemsize == <size_t> dst_stride): + * memcpy(dst_data, src_data, itemsize * dst_extent) + */ goto __pyx_L4; } - /*else*/ { - /* "View.MemoryView":1110 + /* "View.MemoryView":1140 * memcpy(dst_data, src_data, itemsize * dst_extent) * else: * for i in range(dst_extent): # <<<<<<<<<<<<<< * memcpy(dst_data, src_data, itemsize) * src_data += src_stride */ + /*else*/ { __pyx_t_4 = __pyx_v_dst_extent; for (__pyx_t_5 = 0; __pyx_t_5 < __pyx_t_4; __pyx_t_5+=1) { __pyx_v_i = __pyx_t_5; - /* "View.MemoryView":1111 + /* "View.MemoryView":1141 * else: * for i in range(dst_extent): * memcpy(dst_data, src_data, itemsize) # <<<<<<<<<<<<<< @@ -16582,7 +19019,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ memcpy(__pyx_v_dst_data, __pyx_v_src_data, __pyx_v_itemsize); - /* "View.MemoryView":1112 + /* "View.MemoryView":1142 * for i in range(dst_extent): * memcpy(dst_data, src_data, itemsize) * src_data += src_stride # <<<<<<<<<<<<<< @@ -16591,7 +19028,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ __pyx_v_src_data = (__pyx_v_src_data + __pyx_v_src_stride); - /* "View.MemoryView":1113 + /* "View.MemoryView":1143 * memcpy(dst_data, src_data, itemsize) * src_data += src_stride * dst_data += dst_stride # <<<<<<<<<<<<<< @@ -16602,22 +19039,30 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v } } __pyx_L4:; + + /* "View.MemoryView":1135 + * cdef Py_ssize_t dst_stride = dst_strides[0] + * + * if ndim == 1: # <<<<<<<<<<<<<< + * if (src_stride > 0 and dst_stride > 0 and + * <size_t> src_stride == itemsize == <size_t> dst_stride): + */ goto __pyx_L3; } - /*else*/ { - /* "View.MemoryView":1115 + /* "View.MemoryView":1145 * dst_data += dst_stride * else: * for i in range(dst_extent): # <<<<<<<<<<<<<< * _copy_strided_to_strided(src_data, src_strides + 1, * dst_data, dst_strides + 1, */ + /*else*/ { __pyx_t_4 = __pyx_v_dst_extent; for (__pyx_t_5 = 0; __pyx_t_5 < __pyx_t_4; __pyx_t_5+=1) { __pyx_v_i = __pyx_t_5; - /* "View.MemoryView":1116 + /* "View.MemoryView":1146 * else: * for i in range(dst_extent): * _copy_strided_to_strided(src_data, src_strides + 1, # <<<<<<<<<<<<<< @@ -16626,7 +19071,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ _copy_strided_to_strided(__pyx_v_src_data, (__pyx_v_src_strides + 1), __pyx_v_dst_data, (__pyx_v_dst_strides + 1), (__pyx_v_src_shape + 1), (__pyx_v_dst_shape + 1), (__pyx_v_ndim - 1), __pyx_v_itemsize); - /* "View.MemoryView":1120 + /* "View.MemoryView":1150 * src_shape + 1, dst_shape + 1, * ndim - 1, itemsize) * src_data += src_stride # <<<<<<<<<<<<<< @@ -16635,7 +19080,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ __pyx_v_src_data = (__pyx_v_src_data + __pyx_v_src_stride); - /* "View.MemoryView":1121 + /* "View.MemoryView":1151 * ndim - 1, itemsize) * src_data += src_stride * dst_data += dst_stride # <<<<<<<<<<<<<< @@ -16647,7 +19092,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v } __pyx_L3:; - /* "View.MemoryView":1093 + /* "View.MemoryView":1123 * * @cython.cdivision(True) * cdef void _copy_strided_to_strided(char *src_data, Py_ssize_t *src_strides, # <<<<<<<<<<<<<< @@ -16658,7 +19103,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v /* function exit code */ } -/* "View.MemoryView":1123 +/* "View.MemoryView":1153 * dst_data += dst_stride * * cdef void copy_strided_to_strided(__Pyx_memviewslice *src, # <<<<<<<<<<<<<< @@ -16668,7 +19113,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v static void copy_strided_to_strided(__Pyx_memviewslice *__pyx_v_src, __Pyx_memviewslice *__pyx_v_dst, int __pyx_v_ndim, size_t __pyx_v_itemsize) { - /* "View.MemoryView":1126 + /* "View.MemoryView":1156 * __Pyx_memviewslice *dst, * int ndim, size_t itemsize) nogil: * _copy_strided_to_strided(src.data, src.strides, dst.data, dst.strides, # <<<<<<<<<<<<<< @@ -16677,7 +19122,7 @@ static void copy_strided_to_strided(__Pyx_memviewslice *__pyx_v_src, __Pyx_memvi */ _copy_strided_to_strided(__pyx_v_src->data, __pyx_v_src->strides, __pyx_v_dst->data, __pyx_v_dst->strides, __pyx_v_src->shape, __pyx_v_dst->shape, __pyx_v_ndim, __pyx_v_itemsize); - /* "View.MemoryView":1123 + /* "View.MemoryView":1153 * dst_data += dst_stride * * cdef void copy_strided_to_strided(__Pyx_memviewslice *src, # <<<<<<<<<<<<<< @@ -16688,7 +19133,7 @@ static void copy_strided_to_strided(__Pyx_memviewslice *__pyx_v_src, __Pyx_memvi /* function exit code */ } -/* "View.MemoryView":1130 +/* "View.MemoryView":1160 * * @cname('__pyx_memoryview_slice_get_size') * cdef Py_ssize_t slice_get_size(__Pyx_memviewslice *src, int ndim) nogil: # <<<<<<<<<<<<<< @@ -16704,7 +19149,7 @@ static Py_ssize_t __pyx_memoryview_slice_get_size(__Pyx_memviewslice *__pyx_v_sr int __pyx_t_2; int __pyx_t_3; - /* "View.MemoryView":1133 + /* "View.MemoryView":1163 * "Return the size of the memory occupied by the slice in number of bytes" * cdef int i * cdef Py_ssize_t size = src.memview.view.itemsize # <<<<<<<<<<<<<< @@ -16714,7 +19159,7 @@ static Py_ssize_t __pyx_memoryview_slice_get_size(__Pyx_memviewslice *__pyx_v_sr __pyx_t_1 = __pyx_v_src->memview->view.itemsize; __pyx_v_size = __pyx_t_1; - /* "View.MemoryView":1135 + /* "View.MemoryView":1165 * cdef Py_ssize_t size = src.memview.view.itemsize * * for i in range(ndim): # <<<<<<<<<<<<<< @@ -16725,7 +19170,7 @@ static Py_ssize_t __pyx_memoryview_slice_get_size(__Pyx_memviewslice *__pyx_v_sr for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { __pyx_v_i = __pyx_t_3; - /* "View.MemoryView":1136 + /* "View.MemoryView":1166 * * for i in range(ndim): * size *= src.shape[i] # <<<<<<<<<<<<<< @@ -16735,7 +19180,7 @@ static Py_ssize_t __pyx_memoryview_slice_get_size(__Pyx_memviewslice *__pyx_v_sr __pyx_v_size = (__pyx_v_size * (__pyx_v_src->shape[__pyx_v_i])); } - /* "View.MemoryView":1138 + /* "View.MemoryView":1168 * size *= src.shape[i] * * return size # <<<<<<<<<<<<<< @@ -16745,7 +19190,7 @@ static Py_ssize_t __pyx_memoryview_slice_get_size(__Pyx_memviewslice *__pyx_v_sr __pyx_r = __pyx_v_size; goto __pyx_L0; - /* "View.MemoryView":1130 + /* "View.MemoryView":1160 * * @cname('__pyx_memoryview_slice_get_size') * cdef Py_ssize_t slice_get_size(__Pyx_memviewslice *src, int ndim) nogil: # <<<<<<<<<<<<<< @@ -16758,7 +19203,7 @@ static Py_ssize_t __pyx_memoryview_slice_get_size(__Pyx_memviewslice *__pyx_v_sr return __pyx_r; } -/* "View.MemoryView":1141 +/* "View.MemoryView":1171 * * @cname('__pyx_fill_contig_strides_array') * cdef Py_ssize_t fill_contig_strides_array( # <<<<<<<<<<<<<< @@ -16773,7 +19218,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ int __pyx_t_2; int __pyx_t_3; - /* "View.MemoryView":1150 + /* "View.MemoryView":1180 * cdef int idx * * if order == 'F': # <<<<<<<<<<<<<< @@ -16783,7 +19228,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ __pyx_t_1 = ((__pyx_v_order == 'F') != 0); if (__pyx_t_1) { - /* "View.MemoryView":1151 + /* "View.MemoryView":1181 * * if order == 'F': * for idx in range(ndim): # <<<<<<<<<<<<<< @@ -16794,7 +19239,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { __pyx_v_idx = __pyx_t_3; - /* "View.MemoryView":1152 + /* "View.MemoryView":1182 * if order == 'F': * for idx in range(ndim): * strides[idx] = stride # <<<<<<<<<<<<<< @@ -16803,7 +19248,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ */ (__pyx_v_strides[__pyx_v_idx]) = __pyx_v_stride; - /* "View.MemoryView":1153 + /* "View.MemoryView":1183 * for idx in range(ndim): * strides[idx] = stride * stride = stride * shape[idx] # <<<<<<<<<<<<<< @@ -16812,21 +19257,29 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ */ __pyx_v_stride = (__pyx_v_stride * (__pyx_v_shape[__pyx_v_idx])); } + + /* "View.MemoryView":1180 + * cdef int idx + * + * if order == 'F': # <<<<<<<<<<<<<< + * for idx in range(ndim): + * strides[idx] = stride + */ goto __pyx_L3; } - /*else*/ { - /* "View.MemoryView":1155 + /* "View.MemoryView":1185 * stride = stride * shape[idx] * else: * for idx in range(ndim - 1, -1, -1): # <<<<<<<<<<<<<< * strides[idx] = stride * stride = stride * shape[idx] */ - for (__pyx_t_2 = (__pyx_v_ndim - 1); __pyx_t_2 > -1; __pyx_t_2-=1) { + /*else*/ { + for (__pyx_t_2 = (__pyx_v_ndim - 1); __pyx_t_2 > -1L; __pyx_t_2-=1) { __pyx_v_idx = __pyx_t_2; - /* "View.MemoryView":1156 + /* "View.MemoryView":1186 * else: * for idx in range(ndim - 1, -1, -1): * strides[idx] = stride # <<<<<<<<<<<<<< @@ -16835,7 +19288,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ */ (__pyx_v_strides[__pyx_v_idx]) = __pyx_v_stride; - /* "View.MemoryView":1157 + /* "View.MemoryView":1187 * for idx in range(ndim - 1, -1, -1): * strides[idx] = stride * stride = stride * shape[idx] # <<<<<<<<<<<<<< @@ -16847,7 +19300,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ } __pyx_L3:; - /* "View.MemoryView":1159 + /* "View.MemoryView":1189 * stride = stride * shape[idx] * * return stride # <<<<<<<<<<<<<< @@ -16857,7 +19310,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ __pyx_r = __pyx_v_stride; goto __pyx_L0; - /* "View.MemoryView":1141 + /* "View.MemoryView":1171 * * @cname('__pyx_fill_contig_strides_array') * cdef Py_ssize_t fill_contig_strides_array( # <<<<<<<<<<<<<< @@ -16870,7 +19323,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ return __pyx_r; } -/* "View.MemoryView":1162 +/* "View.MemoryView":1192 * * @cname('__pyx_memoryview_copy_data_to_temp') * cdef void *copy_data_to_temp(__Pyx_memviewslice *src, # <<<<<<<<<<<<<< @@ -16889,11 +19342,8 @@ static void *__pyx_memoryview_copy_data_to_temp(__Pyx_memviewslice *__pyx_v_src, int __pyx_t_3; struct __pyx_memoryview_obj *__pyx_t_4; int __pyx_t_5; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; - /* "View.MemoryView":1173 + /* "View.MemoryView":1203 * cdef void *result * * cdef size_t itemsize = src.memview.view.itemsize # <<<<<<<<<<<<<< @@ -16903,7 +19353,7 @@ static void *__pyx_memoryview_copy_data_to_temp(__Pyx_memviewslice *__pyx_v_src, __pyx_t_1 = __pyx_v_src->memview->view.itemsize; __pyx_v_itemsize = __pyx_t_1; - /* "View.MemoryView":1174 + /* "View.MemoryView":1204 * * cdef size_t itemsize = src.memview.view.itemsize * cdef 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= max(src_ndim, dst_ndim) # <<<<<<<<<<<<<< @@ -17539,7 +20060,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ } __pyx_v_ndim = __pyx_t_5; - /* "View.MemoryView":1245 + /* "View.MemoryView":1275 * cdef int ndim = max(src_ndim, dst_ndim) * * for i in range(ndim): # <<<<<<<<<<<<<< @@ -17550,7 +20071,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_5; __pyx_t_3+=1) { __pyx_v_i = __pyx_t_3; - /* "View.MemoryView":1246 + /* "View.MemoryView":1276 * * for i in range(ndim): * if src.shape[i] != dst.shape[i]: # <<<<<<<<<<<<<< @@ -17560,7 +20081,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ __pyx_t_2 = (((__pyx_v_src.shape[__pyx_v_i]) != (__pyx_v_dst.shape[__pyx_v_i])) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1247 + /* "View.MemoryView":1277 * for i in range(ndim): * if src.shape[i] != dst.shape[i]: * if src.shape[i] == 1: # <<<<<<<<<<<<<< @@ -17570,7 +20091,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ __pyx_t_2 = (((__pyx_v_src.shape[__pyx_v_i]) == 1) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1248 + /* "View.MemoryView":1278 * if src.shape[i] != dst.shape[i]: * if src.shape[i] == 1: * broadcasting = True # <<<<<<<<<<<<<< @@ -17579,7 +20100,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ __pyx_v_broadcasting = 1; - /* "View.MemoryView":1249 + /* "View.MemoryView":1279 * if src.shape[i] == 1: * broadcasting = True * src.strides[i] = 0 # <<<<<<<<<<<<<< @@ -17587,25 +20108,39 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ * _err_extents(i, dst.shape[i], src.shape[i]) */ (__pyx_v_src.strides[__pyx_v_i]) = 0; + + /* "View.MemoryView":1277 + * for i in range(ndim): + * if src.shape[i] != dst.shape[i]: + * if src.shape[i] == 1: # <<<<<<<<<<<<<< + * broadcasting = True + * src.strides[i] = 0 + */ goto __pyx_L7; } - /*else*/ { - /* "View.MemoryView":1251 + /* "View.MemoryView":1281 * src.strides[i] = 0 * else: * _err_extents(i, dst.shape[i], src.shape[i]) # <<<<<<<<<<<<<< * * if src.suboffsets[i] >= 0: */ - __pyx_t_4 = __pyx_memoryview_err_extents(__pyx_v_i, (__pyx_v_dst.shape[__pyx_v_i]), (__pyx_v_src.shape[__pyx_v_i])); if (unlikely(__pyx_t_4 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1251; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + /*else*/ { + __pyx_t_4 = __pyx_memoryview_err_extents(__pyx_v_i, (__pyx_v_dst.shape[__pyx_v_i]), (__pyx_v_src.shape[__pyx_v_i])); if (unlikely(__pyx_t_4 == -1)) __PYX_ERR(2, 1281, __pyx_L1_error) } __pyx_L7:; - goto __pyx_L6; + + /* "View.MemoryView":1276 + * + * for i in range(ndim): + * if src.shape[i] != dst.shape[i]: # <<<<<<<<<<<<<< + * if src.shape[i] == 1: + * broadcasting = True + */ } - __pyx_L6:; - /* "View.MemoryView":1253 + /* "View.MemoryView":1283 * _err_extents(i, dst.shape[i], src.shape[i]) * * if src.suboffsets[i] >= 0: # <<<<<<<<<<<<<< @@ -17615,62 +20150,74 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ __pyx_t_2 = (((__pyx_v_src.suboffsets[__pyx_v_i]) >= 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1254 + /* "View.MemoryView":1284 * * if src.suboffsets[i] >= 0: * _err_dim(ValueError, "Dimension %d is not direct", i) # <<<<<<<<<<<<<< * * if slices_overlap(&src, &dst, ndim, itemsize): */ - __pyx_t_4 = __pyx_memoryview_err_dim(__pyx_builtin_ValueError, __pyx_k_Dimension_d_is_not_direct, __pyx_v_i); if (unlikely(__pyx_t_4 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1254; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - goto __pyx_L8; + __pyx_t_4 = __pyx_memoryview_err_dim(__pyx_builtin_ValueError, ((char *)"Dimension %d is not direct"), __pyx_v_i); if (unlikely(__pyx_t_4 == -1)) __PYX_ERR(2, 1284, __pyx_L1_error) + + /* "View.MemoryView":1283 + * _err_extents(i, dst.shape[i], src.shape[i]) + * + * if src.suboffsets[i] >= 0: # <<<<<<<<<<<<<< + * _err_dim(ValueError, "Dimension %d is not direct", i) + * + */ } - __pyx_L8:; } - /* "View.MemoryView":1256 + /* "View.MemoryView":1286 * _err_dim(ValueError, "Dimension %d is not direct", i) * * if slices_overlap(&src, &dst, ndim, itemsize): # <<<<<<<<<<<<<< * - * if not slice_is_contig(&src, order, ndim): + * if not slice_is_contig(src, order, ndim): */ __pyx_t_2 = (__pyx_slices_overlap((&__pyx_v_src), (&__pyx_v_dst), __pyx_v_ndim, __pyx_v_itemsize) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1258 + /* "View.MemoryView":1288 * if slices_overlap(&src, &dst, ndim, itemsize): * - * if not slice_is_contig(&src, order, ndim): # <<<<<<<<<<<<<< + * if not slice_is_contig(src, order, ndim): # <<<<<<<<<<<<<< * order = get_best_order(&dst, ndim) * */ - __pyx_t_2 = ((!(__pyx_memviewslice_is_contig((&__pyx_v_src), __pyx_v_order, __pyx_v_ndim) != 0)) != 0); + __pyx_t_2 = ((!(__pyx_memviewslice_is_contig(__pyx_v_src, __pyx_v_order, __pyx_v_ndim) != 0)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1259 + /* "View.MemoryView":1289 * - * if not slice_is_contig(&src, order, ndim): + * if not slice_is_contig(src, order, ndim): * order = get_best_order(&dst, ndim) # <<<<<<<<<<<<<< * * tmpdata = copy_data_to_temp(&src, &tmp, order, ndim) */ __pyx_v_order = __pyx_get_best_slice_order((&__pyx_v_dst), __pyx_v_ndim); - goto __pyx_L10; + + /* "View.MemoryView":1288 + * if slices_overlap(&src, &dst, ndim, itemsize): + * + * if not slice_is_contig(src, order, ndim): # <<<<<<<<<<<<<< + * order = get_best_order(&dst, ndim) + * + */ } - __pyx_L10:; - /* "View.MemoryView":1261 + /* "View.MemoryView":1291 * order = get_best_order(&dst, ndim) * * tmpdata = copy_data_to_temp(&src, &tmp, order, ndim) # <<<<<<<<<<<<<< * src = tmp * */ - __pyx_t_6 = __pyx_memoryview_copy_data_to_temp((&__pyx_v_src), (&__pyx_v_tmp), __pyx_v_order, __pyx_v_ndim); if (unlikely(__pyx_t_6 == NULL)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1261; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = __pyx_memoryview_copy_data_to_temp((&__pyx_v_src), (&__pyx_v_tmp), __pyx_v_order, __pyx_v_ndim); if (unlikely(__pyx_t_6 == NULL)) __PYX_ERR(2, 1291, __pyx_L1_error) __pyx_v_tmpdata = __pyx_t_6; - /* "View.MemoryView":1262 + /* "View.MemoryView":1292 * * tmpdata = copy_data_to_temp(&src, &tmp, order, ndim) * src = tmp # <<<<<<<<<<<<<< @@ -17678,11 +20225,17 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ * if not broadcasting: */ __pyx_v_src = __pyx_v_tmp; - goto __pyx_L9; + + /* "View.MemoryView":1286 + * _err_dim(ValueError, "Dimension %d is not direct", i) + * + * if slices_overlap(&src, &dst, ndim, itemsize): # <<<<<<<<<<<<<< + * + * if not slice_is_contig(src, order, ndim): + */ } - __pyx_L9:; - /* "View.MemoryView":1264 + /* "View.MemoryView":1294 * src = tmp * * if not broadcasting: # <<<<<<<<<<<<<< @@ -17692,51 +20245,66 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ __pyx_t_2 = ((!(__pyx_v_broadcasting != 0)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1267 + /* "View.MemoryView":1297 * * - * if slice_is_contig(&src, 'C', ndim): # <<<<<<<<<<<<<< - * direct_copy = slice_is_contig(&dst, 'C', ndim) - * elif slice_is_contig(&src, 'F', ndim): + * if slice_is_contig(src, 'C', ndim): # <<<<<<<<<<<<<< + * direct_copy = slice_is_contig(dst, 'C', ndim) + * elif slice_is_contig(src, 'F', ndim): */ - __pyx_t_2 = (__pyx_memviewslice_is_contig((&__pyx_v_src), 'C', __pyx_v_ndim) != 0); + __pyx_t_2 = (__pyx_memviewslice_is_contig(__pyx_v_src, 'C', __pyx_v_ndim) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1268 + /* "View.MemoryView":1298 * - * if slice_is_contig(&src, 'C', ndim): - * direct_copy = slice_is_contig(&dst, 'C', ndim) # <<<<<<<<<<<<<< - * elif slice_is_contig(&src, 'F', ndim): - * direct_copy = slice_is_contig(&dst, 'F', ndim) + * if slice_is_contig(src, 'C', ndim): + * direct_copy = slice_is_contig(dst, 'C', ndim) # <<<<<<<<<<<<<< + * elif slice_is_contig(src, 'F', ndim): + * direct_copy = slice_is_contig(dst, 'F', ndim) + */ + __pyx_v_direct_copy = __pyx_memviewslice_is_contig(__pyx_v_dst, 'C', __pyx_v_ndim); + + /* "View.MemoryView":1297 + * + * + * if slice_is_contig(src, 'C', ndim): # <<<<<<<<<<<<<< + * direct_copy = slice_is_contig(dst, 'C', ndim) + * elif slice_is_contig(src, 'F', ndim): */ - __pyx_v_direct_copy = __pyx_memviewslice_is_contig((&__pyx_v_dst), 'C', __pyx_v_ndim); goto __pyx_L12; } - /* "View.MemoryView":1269 - * if slice_is_contig(&src, 'C', ndim): - * direct_copy = slice_is_contig(&dst, 'C', ndim) - * elif slice_is_contig(&src, 'F', ndim): # <<<<<<<<<<<<<< - * direct_copy = slice_is_contig(&dst, 'F', ndim) + /* "View.MemoryView":1299 + * if slice_is_contig(src, 'C', ndim): + * direct_copy = slice_is_contig(dst, 'C', ndim) + * elif slice_is_contig(src, 'F', ndim): # <<<<<<<<<<<<<< + * direct_copy = slice_is_contig(dst, 'F', ndim) * */ - __pyx_t_2 = (__pyx_memviewslice_is_contig((&__pyx_v_src), 'F', __pyx_v_ndim) != 0); + __pyx_t_2 = (__pyx_memviewslice_is_contig(__pyx_v_src, 'F', __pyx_v_ndim) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1270 - * direct_copy = slice_is_contig(&dst, 'C', ndim) - * elif slice_is_contig(&src, 'F', ndim): - * direct_copy = slice_is_contig(&dst, 'F', ndim) # <<<<<<<<<<<<<< + /* "View.MemoryView":1300 + * direct_copy = slice_is_contig(dst, 'C', ndim) + * elif slice_is_contig(src, 'F', ndim): + * direct_copy = slice_is_contig(dst, 'F', ndim) # <<<<<<<<<<<<<< * * if direct_copy: */ - __pyx_v_direct_copy = __pyx_memviewslice_is_contig((&__pyx_v_dst), 'F', __pyx_v_ndim); - goto __pyx_L12; + __pyx_v_direct_copy = __pyx_memviewslice_is_contig(__pyx_v_dst, 'F', __pyx_v_ndim); + + /* "View.MemoryView":1299 + * if slice_is_contig(src, 'C', ndim): + * direct_copy = slice_is_contig(dst, 'C', ndim) + * elif slice_is_contig(src, 'F', ndim): # <<<<<<<<<<<<<< + * direct_copy = slice_is_contig(dst, 'F', ndim) + * + */ } __pyx_L12:; - /* "View.MemoryView":1272 - * direct_copy = slice_is_contig(&dst, 'F', ndim) + /* "View.MemoryView":1302 + * direct_copy = slice_is_contig(dst, 'F', ndim) * * if direct_copy: # <<<<<<<<<<<<<< * @@ -17745,7 +20313,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ __pyx_t_2 = (__pyx_v_direct_copy != 0); if (__pyx_t_2) { - /* "View.MemoryView":1274 + /* "View.MemoryView":1304 * if direct_copy: * * refcount_copying(&dst, dtype_is_object, ndim, False) # <<<<<<<<<<<<<< @@ -17754,7 +20322,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ __pyx_memoryview_refcount_copying((&__pyx_v_dst), __pyx_v_dtype_is_object, __pyx_v_ndim, 0); - /* "View.MemoryView":1275 + /* "View.MemoryView":1305 * * refcount_copying(&dst, dtype_is_object, ndim, False) * memcpy(dst.data, src.data, slice_get_size(&src, ndim)) # <<<<<<<<<<<<<< @@ -17763,7 +20331,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ memcpy(__pyx_v_dst.data, __pyx_v_src.data, __pyx_memoryview_slice_get_size((&__pyx_v_src), __pyx_v_ndim)); - /* "View.MemoryView":1276 + /* "View.MemoryView":1306 * refcount_copying(&dst, dtype_is_object, ndim, False) * memcpy(dst.data, src.data, slice_get_size(&src, ndim)) * refcount_copying(&dst, dtype_is_object, ndim, True) # <<<<<<<<<<<<<< @@ -17772,7 +20340,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ __pyx_memoryview_refcount_copying((&__pyx_v_dst), __pyx_v_dtype_is_object, __pyx_v_ndim, 1); - /* "View.MemoryView":1277 + /* "View.MemoryView":1307 * memcpy(dst.data, src.data, slice_get_size(&src, ndim)) * refcount_copying(&dst, dtype_is_object, ndim, True) * free(tmpdata) # <<<<<<<<<<<<<< @@ -17781,7 +20349,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ free(__pyx_v_tmpdata); - /* "View.MemoryView":1278 + /* "View.MemoryView":1308 * refcount_copying(&dst, dtype_is_object, ndim, True) * free(tmpdata) * return 0 # <<<<<<<<<<<<<< @@ -17790,12 +20358,26 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ __pyx_r = 0; goto __pyx_L0; + + /* "View.MemoryView":1302 + * direct_copy = slice_is_contig(dst, 'F', ndim) + * + * if direct_copy: # <<<<<<<<<<<<<< + * + * refcount_copying(&dst, dtype_is_object, ndim, False) + */ } - goto __pyx_L11; + + /* "View.MemoryView":1294 + * src = tmp + * + * if not broadcasting: # <<<<<<<<<<<<<< + * + * + */ } - __pyx_L11:; - /* "View.MemoryView":1280 + /* "View.MemoryView":1310 * return 0 * * if order == 'F' == get_best_order(&dst, ndim): # <<<<<<<<<<<<<< @@ -17809,28 +20391,34 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ __pyx_t_7 = (__pyx_t_2 != 0); if (__pyx_t_7) { - /* "View.MemoryView":1283 + /* "View.MemoryView":1313 * * * transpose_memslice(&src) # <<<<<<<<<<<<<< * transpose_memslice(&dst) * */ - __pyx_t_5 = __pyx_memslice_transpose((&__pyx_v_src)); if (unlikely(__pyx_t_5 == 0)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1283; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __pyx_memslice_transpose((&__pyx_v_src)); if (unlikely(__pyx_t_5 == 0)) __PYX_ERR(2, 1313, __pyx_L1_error) - /* "View.MemoryView":1284 + /* "View.MemoryView":1314 * * transpose_memslice(&src) * transpose_memslice(&dst) # <<<<<<<<<<<<<< * * refcount_copying(&dst, dtype_is_object, ndim, False) */ - __pyx_t_5 = __pyx_memslice_transpose((&__pyx_v_dst)); if (unlikely(__pyx_t_5 == 0)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1284; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - goto __pyx_L14; + __pyx_t_5 = __pyx_memslice_transpose((&__pyx_v_dst)); if (unlikely(__pyx_t_5 == 0)) __PYX_ERR(2, 1314, __pyx_L1_error) + + /* "View.MemoryView":1310 + * return 0 + * + * if order == 'F' == get_best_order(&dst, ndim): # <<<<<<<<<<<<<< + * + * + */ } - __pyx_L14:; - /* "View.MemoryView":1286 + /* "View.MemoryView":1316 * transpose_memslice(&dst) * * refcount_copying(&dst, dtype_is_object, ndim, False) # <<<<<<<<<<<<<< @@ -17839,7 +20427,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ __pyx_memoryview_refcount_copying((&__pyx_v_dst), __pyx_v_dtype_is_object, __pyx_v_ndim, 0); - /* "View.MemoryView":1287 + /* "View.MemoryView":1317 * * refcount_copying(&dst, dtype_is_object, ndim, False) * copy_strided_to_strided(&src, &dst, ndim, itemsize) # <<<<<<<<<<<<<< @@ -17848,7 +20436,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ copy_strided_to_strided((&__pyx_v_src), (&__pyx_v_dst), __pyx_v_ndim, __pyx_v_itemsize); - /* "View.MemoryView":1288 + /* "View.MemoryView":1318 * refcount_copying(&dst, dtype_is_object, ndim, False) * copy_strided_to_strided(&src, &dst, ndim, itemsize) * refcount_copying(&dst, dtype_is_object, ndim, True) # <<<<<<<<<<<<<< @@ -17857,7 +20445,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ __pyx_memoryview_refcount_copying((&__pyx_v_dst), __pyx_v_dtype_is_object, __pyx_v_ndim, 1); - /* "View.MemoryView":1290 + /* "View.MemoryView":1320 * refcount_copying(&dst, dtype_is_object, ndim, True) * * free(tmpdata) # <<<<<<<<<<<<<< @@ -17866,7 +20454,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ free(__pyx_v_tmpdata); - /* "View.MemoryView":1291 + /* "View.MemoryView":1321 * * free(tmpdata) * return 0 # <<<<<<<<<<<<<< @@ -17876,7 +20464,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ __pyx_r = 0; goto __pyx_L0; - /* "View.MemoryView":1222 + /* "View.MemoryView":1252 * * @cname('__pyx_memoryview_copy_contents') * cdef int memoryview_copy_contents(__Pyx_memviewslice src, # <<<<<<<<<<<<<< @@ -17900,21 +20488,21 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ return __pyx_r; } -/* "View.MemoryView":1294 +/* "View.MemoryView":1324 * * @cname('__pyx_memoryview_broadcast_leading') - * cdef void broadcast_leading(__Pyx_memviewslice *slice, # <<<<<<<<<<<<<< + * cdef void broadcast_leading(__Pyx_memviewslice *mslice, # <<<<<<<<<<<<<< * int ndim, * int ndim_other) nogil: */ -static void __pyx_memoryview_broadcast_leading(__Pyx_memviewslice *__pyx_v_slice, int __pyx_v_ndim, int __pyx_v_ndim_other) { +static void __pyx_memoryview_broadcast_leading(__Pyx_memviewslice *__pyx_v_mslice, int __pyx_v_ndim, int __pyx_v_ndim_other) { int __pyx_v_i; int __pyx_v_offset; int __pyx_t_1; int __pyx_t_2; - /* "View.MemoryView":1298 + /* "View.MemoryView":1328 * int ndim_other) nogil: * cdef int i * cdef int offset = ndim_other - ndim # <<<<<<<<<<<<<< @@ -17923,87 +20511,87 @@ static void __pyx_memoryview_broadcast_leading(__Pyx_memviewslice *__pyx_v_slice */ __pyx_v_offset = (__pyx_v_ndim_other - __pyx_v_ndim); - /* "View.MemoryView":1300 + /* "View.MemoryView":1330 * cdef int offset = ndim_other - ndim * * for i in range(ndim - 1, -1, -1): # <<<<<<<<<<<<<< - * slice.shape[i + offset] = slice.shape[i] - * slice.strides[i + offset] = slice.strides[i] + * mslice.shape[i + offset] = mslice.shape[i] + * mslice.strides[i + offset] = mslice.strides[i] */ - for (__pyx_t_1 = (__pyx_v_ndim - 1); __pyx_t_1 > -1; __pyx_t_1-=1) { + for (__pyx_t_1 = (__pyx_v_ndim - 1); __pyx_t_1 > -1L; __pyx_t_1-=1) { __pyx_v_i = __pyx_t_1; - /* "View.MemoryView":1301 + /* "View.MemoryView":1331 * * for i in range(ndim - 1, -1, -1): - * slice.shape[i + offset] = slice.shape[i] # <<<<<<<<<<<<<< - * slice.strides[i + offset] = slice.strides[i] - * slice.suboffsets[i + offset] = slice.suboffsets[i] + * mslice.shape[i + offset] = mslice.shape[i] # <<<<<<<<<<<<<< + * mslice.strides[i + offset] = mslice.strides[i] + * mslice.suboffsets[i + offset] = mslice.suboffsets[i] */ - (__pyx_v_slice->shape[(__pyx_v_i + __pyx_v_offset)]) = (__pyx_v_slice->shape[__pyx_v_i]); + (__pyx_v_mslice->shape[(__pyx_v_i + __pyx_v_offset)]) = (__pyx_v_mslice->shape[__pyx_v_i]); - /* "View.MemoryView":1302 + /* "View.MemoryView":1332 * for i in range(ndim - 1, -1, -1): - * slice.shape[i + offset] = slice.shape[i] - * slice.strides[i + offset] = slice.strides[i] # <<<<<<<<<<<<<< - * slice.suboffsets[i + offset] = slice.suboffsets[i] + * mslice.shape[i + offset] = mslice.shape[i] + * mslice.strides[i + offset] = mslice.strides[i] # <<<<<<<<<<<<<< + * mslice.suboffsets[i + offset] = mslice.suboffsets[i] * */ - (__pyx_v_slice->strides[(__pyx_v_i + __pyx_v_offset)]) = (__pyx_v_slice->strides[__pyx_v_i]); + (__pyx_v_mslice->strides[(__pyx_v_i + __pyx_v_offset)]) = (__pyx_v_mslice->strides[__pyx_v_i]); - /* "View.MemoryView":1303 - * slice.shape[i + offset] = slice.shape[i] - * slice.strides[i + offset] = slice.strides[i] - * slice.suboffsets[i + offset] = slice.suboffsets[i] # <<<<<<<<<<<<<< + /* "View.MemoryView":1333 + * mslice.shape[i + offset] = mslice.shape[i] + * mslice.strides[i + offset] = mslice.strides[i] + * mslice.suboffsets[i + offset] = mslice.suboffsets[i] # <<<<<<<<<<<<<< * * for i in range(offset): */ - (__pyx_v_slice->suboffsets[(__pyx_v_i + __pyx_v_offset)]) = (__pyx_v_slice->suboffsets[__pyx_v_i]); + (__pyx_v_mslice->suboffsets[(__pyx_v_i + __pyx_v_offset)]) = (__pyx_v_mslice->suboffsets[__pyx_v_i]); } - /* "View.MemoryView":1305 - * slice.suboffsets[i + offset] = slice.suboffsets[i] + /* "View.MemoryView":1335 + * mslice.suboffsets[i + offset] = mslice.suboffsets[i] * * for i in range(offset): # <<<<<<<<<<<<<< - * slice.shape[i] = 1 - * slice.strides[i] = slice.strides[0] + * mslice.shape[i] = 1 + * mslice.strides[i] = mslice.strides[0] */ __pyx_t_1 = __pyx_v_offset; for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_1; __pyx_t_2+=1) { __pyx_v_i = __pyx_t_2; - /* "View.MemoryView":1306 + /* "View.MemoryView":1336 * * for i in range(offset): - * slice.shape[i] = 1 # <<<<<<<<<<<<<< - * slice.strides[i] = slice.strides[0] - * slice.suboffsets[i] = -1 + * mslice.shape[i] = 1 # <<<<<<<<<<<<<< + * mslice.strides[i] = mslice.strides[0] + * mslice.suboffsets[i] = -1 */ - (__pyx_v_slice->shape[__pyx_v_i]) = 1; + (__pyx_v_mslice->shape[__pyx_v_i]) = 1; - /* "View.MemoryView":1307 + /* "View.MemoryView":1337 * for i in range(offset): - * slice.shape[i] = 1 - * slice.strides[i] = slice.strides[0] # <<<<<<<<<<<<<< - * slice.suboffsets[i] = -1 + * mslice.shape[i] = 1 + * mslice.strides[i] = mslice.strides[0] # <<<<<<<<<<<<<< + * mslice.suboffsets[i] = -1 * */ - (__pyx_v_slice->strides[__pyx_v_i]) = (__pyx_v_slice->strides[0]); + (__pyx_v_mslice->strides[__pyx_v_i]) = (__pyx_v_mslice->strides[0]); - /* "View.MemoryView":1308 - * slice.shape[i] = 1 - * slice.strides[i] = slice.strides[0] - * slice.suboffsets[i] = -1 # <<<<<<<<<<<<<< + /* "View.MemoryView":1338 + * mslice.shape[i] = 1 + * mslice.strides[i] = mslice.strides[0] + * mslice.suboffsets[i] = -1 # <<<<<<<<<<<<<< * * */ - (__pyx_v_slice->suboffsets[__pyx_v_i]) = -1; + (__pyx_v_mslice->suboffsets[__pyx_v_i]) = -1L; } - /* "View.MemoryView":1294 + /* "View.MemoryView":1324 * * @cname('__pyx_memoryview_broadcast_leading') - * cdef void broadcast_leading(__Pyx_memviewslice *slice, # <<<<<<<<<<<<<< + * cdef void broadcast_leading(__Pyx_memviewslice *mslice, # <<<<<<<<<<<<<< * int ndim, * int ndim_other) nogil: */ @@ -18011,7 +20599,7 @@ static void __pyx_memoryview_broadcast_leading(__Pyx_memviewslice *__pyx_v_slice /* function exit code */ } -/* "View.MemoryView":1316 +/* "View.MemoryView":1346 * * @cname('__pyx_memoryview_refcount_copying') * cdef void refcount_copying(__Pyx_memviewslice *dst, bint dtype_is_object, # <<<<<<<<<<<<<< @@ -18022,7 +20610,7 @@ static void __pyx_memoryview_broadcast_leading(__Pyx_memviewslice *__pyx_v_slice static void __pyx_memoryview_refcount_copying(__Pyx_memviewslice *__pyx_v_dst, int __pyx_v_dtype_is_object, int __pyx_v_ndim, int __pyx_v_inc) { int __pyx_t_1; - /* "View.MemoryView":1320 + /* "View.MemoryView":1350 * * * if dtype_is_object: # <<<<<<<<<<<<<< @@ -18032,7 +20620,7 @@ static void __pyx_memoryview_refcount_copying(__Pyx_memviewslice *__pyx_v_dst, i __pyx_t_1 = (__pyx_v_dtype_is_object != 0); if (__pyx_t_1) { - /* "View.MemoryView":1321 + /* "View.MemoryView":1351 * * if dtype_is_object: * refcount_objects_in_slice_with_gil(dst.data, dst.shape, # <<<<<<<<<<<<<< @@ -18040,11 +20628,17 @@ static void __pyx_memoryview_refcount_copying(__Pyx_memviewslice *__pyx_v_dst, i * */ __pyx_memoryview_refcount_objects_in_slice_with_gil(__pyx_v_dst->data, __pyx_v_dst->shape, __pyx_v_dst->strides, __pyx_v_ndim, __pyx_v_inc); - goto __pyx_L3; + + /* "View.MemoryView":1350 + * + * + * if dtype_is_object: # <<<<<<<<<<<<<< + * refcount_objects_in_slice_with_gil(dst.data, dst.shape, + * dst.strides, ndim, inc) + */ } - __pyx_L3:; - /* "View.MemoryView":1316 + /* "View.MemoryView":1346 * * @cname('__pyx_memoryview_refcount_copying') * cdef void refcount_copying(__Pyx_memviewslice *dst, bint dtype_is_object, # <<<<<<<<<<<<<< @@ -18055,7 +20649,7 @@ static void __pyx_memoryview_refcount_copying(__Pyx_memviewslice *__pyx_v_dst, i /* function exit code */ } -/* "View.MemoryView":1325 +/* "View.MemoryView":1355 * * @cname('__pyx_memoryview_refcount_objects_in_slice_with_gil') * cdef void refcount_objects_in_slice_with_gil(char *data, Py_ssize_t *shape, # <<<<<<<<<<<<<< @@ -18070,7 +20664,7 @@ static void __pyx_memoryview_refcount_objects_in_slice_with_gil(char *__pyx_v_da #endif __Pyx_RefNannySetupContext("refcount_objects_in_slice_with_gil", 0); - /* "View.MemoryView":1328 + /* "View.MemoryView":1358 * Py_ssize_t *strides, int ndim, * bint inc) with gil: * refcount_objects_in_slice(data, shape, strides, ndim, inc) # <<<<<<<<<<<<<< @@ -18079,7 +20673,7 @@ static void __pyx_memoryview_refcount_objects_in_slice_with_gil(char *__pyx_v_da */ __pyx_memoryview_refcount_objects_in_slice(__pyx_v_data, __pyx_v_shape, __pyx_v_strides, __pyx_v_ndim, __pyx_v_inc); - /* "View.MemoryView":1325 + /* "View.MemoryView":1355 * * @cname('__pyx_memoryview_refcount_objects_in_slice_with_gil') * cdef void refcount_objects_in_slice_with_gil(char *data, Py_ssize_t *shape, # <<<<<<<<<<<<<< @@ -18094,7 +20688,7 @@ static void __pyx_memoryview_refcount_objects_in_slice_with_gil(char *__pyx_v_da #endif } -/* "View.MemoryView":1331 +/* "View.MemoryView":1361 * * @cname('__pyx_memoryview_refcount_objects_in_slice') * cdef void refcount_objects_in_slice(char *data, Py_ssize_t *shape, # <<<<<<<<<<<<<< @@ -18110,7 +20704,7 @@ static void __pyx_memoryview_refcount_objects_in_slice(char *__pyx_v_data, Py_ss int __pyx_t_3; __Pyx_RefNannySetupContext("refcount_objects_in_slice", 0); - /* "View.MemoryView":1335 + /* "View.MemoryView":1365 * cdef Py_ssize_t i * * for i in range(shape[0]): # <<<<<<<<<<<<<< @@ -18121,7 +20715,7 @@ static void __pyx_memoryview_refcount_objects_in_slice(char *__pyx_v_data, Py_ss for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_1; __pyx_t_2+=1) { __pyx_v_i = __pyx_t_2; - /* "View.MemoryView":1336 + /* "View.MemoryView":1366 * * for i in range(shape[0]): * if ndim == 1: # <<<<<<<<<<<<<< @@ -18131,7 +20725,7 @@ static void __pyx_memoryview_refcount_objects_in_slice(char *__pyx_v_data, Py_ss __pyx_t_3 = ((__pyx_v_ndim == 1) != 0); if (__pyx_t_3) { - /* "View.MemoryView":1337 + /* "View.MemoryView":1367 * for i in range(shape[0]): * if ndim == 1: * if inc: # <<<<<<<<<<<<<< @@ -18141,7 +20735,7 @@ static void __pyx_memoryview_refcount_objects_in_slice(char *__pyx_v_data, Py_ss __pyx_t_3 = (__pyx_v_inc != 0); if (__pyx_t_3) { - /* "View.MemoryView":1338 + /* "View.MemoryView":1368 * if ndim == 1: * if inc: * Py_INCREF((<PyObject **> data)[0]) # <<<<<<<<<<<<<< @@ -18149,36 +20743,60 @@ static void __pyx_memoryview_refcount_objects_in_slice(char *__pyx_v_data, Py_ss * Py_DECREF((<PyObject **> data)[0]) */ Py_INCREF((((PyObject **)__pyx_v_data)[0])); + + /* "View.MemoryView":1367 + * for i in range(shape[0]): + * if ndim == 1: + * if inc: # <<<<<<<<<<<<<< + * Py_INCREF((<PyObject **> data)[0]) + * else: + */ goto __pyx_L6; } - /*else*/ { - /* "View.MemoryView":1340 + /* "View.MemoryView":1370 * Py_INCREF((<PyObject **> data)[0]) * else: * Py_DECREF((<PyObject **> data)[0]) # <<<<<<<<<<<<<< * else: * refcount_objects_in_slice(data, shape + 1, strides + 1, */ + /*else*/ { Py_DECREF((((PyObject **)__pyx_v_data)[0])); } __pyx_L6:; + + /* "View.MemoryView":1366 + * + * for i in range(shape[0]): + * if ndim == 1: # <<<<<<<<<<<<<< + * if inc: + * Py_INCREF((<PyObject **> data)[0]) + */ goto __pyx_L5; } - /*else*/ { - /* "View.MemoryView":1342 + /* "View.MemoryView":1372 * Py_DECREF((<PyObject **> data)[0]) * else: * refcount_objects_in_slice(data, shape + 1, strides + 1, # <<<<<<<<<<<<<< * ndim - 1, inc) * */ + /*else*/ { + + /* "View.MemoryView":1373 + * else: + * refcount_objects_in_slice(data, shape + 1, strides + 1, + * ndim - 1, inc) # <<<<<<<<<<<<<< + * + * data += strides[0] + */ __pyx_memoryview_refcount_objects_in_slice(__pyx_v_data, (__pyx_v_shape + 1), (__pyx_v_strides + 1), (__pyx_v_ndim - 1), __pyx_v_inc); } __pyx_L5:; - /* "View.MemoryView":1345 + /* "View.MemoryView":1375 * ndim - 1, inc) * * data += strides[0] # <<<<<<<<<<<<<< @@ -18188,7 +20806,7 @@ static void __pyx_memoryview_refcount_objects_in_slice(char *__pyx_v_data, Py_ss __pyx_v_data = (__pyx_v_data + (__pyx_v_strides[0])); } - /* "View.MemoryView":1331 + /* "View.MemoryView":1361 * * @cname('__pyx_memoryview_refcount_objects_in_slice') * cdef void refcount_objects_in_slice(char *data, Py_ssize_t *shape, # <<<<<<<<<<<<<< @@ -18200,7 +20818,7 @@ static void __pyx_memoryview_refcount_objects_in_slice(char *__pyx_v_data, Py_ss __Pyx_RefNannyFinishContext(); } -/* "View.MemoryView":1351 +/* "View.MemoryView":1381 * * @cname('__pyx_memoryview_slice_assign_scalar') * cdef void slice_assign_scalar(__Pyx_memviewslice *dst, int ndim, # <<<<<<<<<<<<<< @@ -18210,7 +20828,7 @@ static void __pyx_memoryview_refcount_objects_in_slice(char *__pyx_v_data, Py_ss static void __pyx_memoryview_slice_assign_scalar(__Pyx_memviewslice *__pyx_v_dst, int __pyx_v_ndim, size_t __pyx_v_itemsize, void *__pyx_v_item, int __pyx_v_dtype_is_object) { - /* "View.MemoryView":1354 + /* "View.MemoryView":1384 * size_t itemsize, void *item, * bint dtype_is_object) nogil: * refcount_copying(dst, dtype_is_object, ndim, False) # <<<<<<<<<<<<<< @@ -18219,7 +20837,7 @@ static void __pyx_memoryview_slice_assign_scalar(__Pyx_memviewslice *__pyx_v_dst */ __pyx_memoryview_refcount_copying(__pyx_v_dst, __pyx_v_dtype_is_object, __pyx_v_ndim, 0); - /* "View.MemoryView":1355 + /* "View.MemoryView":1385 * bint dtype_is_object) nogil: * refcount_copying(dst, dtype_is_object, ndim, False) * _slice_assign_scalar(dst.data, dst.shape, dst.strides, ndim, # <<<<<<<<<<<<<< @@ -18228,7 +20846,7 @@ static void __pyx_memoryview_slice_assign_scalar(__Pyx_memviewslice *__pyx_v_dst */ __pyx_memoryview__slice_assign_scalar(__pyx_v_dst->data, __pyx_v_dst->shape, __pyx_v_dst->strides, __pyx_v_ndim, __pyx_v_itemsize, __pyx_v_item); - /* "View.MemoryView":1357 + /* "View.MemoryView":1387 * _slice_assign_scalar(dst.data, dst.shape, dst.strides, ndim, * itemsize, item) * refcount_copying(dst, dtype_is_object, ndim, True) # <<<<<<<<<<<<<< @@ -18237,7 +20855,7 @@ static void __pyx_memoryview_slice_assign_scalar(__Pyx_memviewslice *__pyx_v_dst */ __pyx_memoryview_refcount_copying(__pyx_v_dst, __pyx_v_dtype_is_object, __pyx_v_ndim, 1); - /* "View.MemoryView":1351 + /* "View.MemoryView":1381 * * @cname('__pyx_memoryview_slice_assign_scalar') * cdef void slice_assign_scalar(__Pyx_memviewslice *dst, int ndim, # <<<<<<<<<<<<<< @@ -18248,7 +20866,7 @@ static void __pyx_memoryview_slice_assign_scalar(__Pyx_memviewslice *__pyx_v_dst /* function exit code */ } -/* "View.MemoryView":1361 +/* "View.MemoryView":1391 * * @cname('__pyx_memoryview__slice_assign_scalar') * cdef void _slice_assign_scalar(char *data, Py_ssize_t *shape, # <<<<<<<<<<<<<< @@ -18264,7 +20882,7 @@ static void __pyx_memoryview__slice_assign_scalar(char *__pyx_v_data, Py_ssize_t Py_ssize_t __pyx_t_2; Py_ssize_t __pyx_t_3; - /* "View.MemoryView":1365 + /* "View.MemoryView":1395 * size_t itemsize, void *item) nogil: * cdef Py_ssize_t i * cdef Py_ssize_t stride = strides[0] # <<<<<<<<<<<<<< @@ -18273,7 +20891,7 @@ static void __pyx_memoryview__slice_assign_scalar(char *__pyx_v_data, Py_ssize_t */ __pyx_v_stride = (__pyx_v_strides[0]); - /* "View.MemoryView":1366 + /* "View.MemoryView":1396 * cdef Py_ssize_t i * cdef Py_ssize_t stride = strides[0] * cdef Py_ssize_t extent = shape[0] # <<<<<<<<<<<<<< @@ -18282,7 +20900,7 @@ static void __pyx_memoryview__slice_assign_scalar(char *__pyx_v_data, Py_ssize_t */ __pyx_v_extent = (__pyx_v_shape[0]); - /* "View.MemoryView":1368 + /* "View.MemoryView":1398 * cdef Py_ssize_t extent = shape[0] * * if ndim == 1: # <<<<<<<<<<<<<< @@ -18292,7 +20910,7 @@ static void __pyx_memoryview__slice_assign_scalar(char *__pyx_v_data, Py_ssize_t __pyx_t_1 = ((__pyx_v_ndim == 1) != 0); if (__pyx_t_1) { - /* "View.MemoryView":1369 + /* "View.MemoryView":1399 * * if ndim == 1: * for i in range(extent): # <<<<<<<<<<<<<< @@ -18303,7 +20921,7 @@ static void __pyx_memoryview__slice_assign_scalar(char *__pyx_v_data, Py_ssize_t for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { __pyx_v_i = __pyx_t_3; - /* "View.MemoryView":1370 + /* "View.MemoryView":1400 * if ndim == 1: * for i in range(extent): * memcpy(data, item, itemsize) # <<<<<<<<<<<<<< @@ -18312,7 +20930,7 @@ static void __pyx_memoryview__slice_assign_scalar(char *__pyx_v_data, Py_ssize_t */ memcpy(__pyx_v_data, __pyx_v_item, __pyx_v_itemsize); - /* "View.MemoryView":1371 + /* "View.MemoryView":1401 * for i in range(extent): * memcpy(data, item, itemsize) * data += stride # <<<<<<<<<<<<<< @@ -18321,22 +20939,30 @@ static void __pyx_memoryview__slice_assign_scalar(char *__pyx_v_data, Py_ssize_t */ __pyx_v_data = (__pyx_v_data + __pyx_v_stride); } + + /* "View.MemoryView":1398 + * cdef Py_ssize_t extent = shape[0] + * + * if ndim == 1: # <<<<<<<<<<<<<< + * for i in range(extent): + * memcpy(data, item, itemsize) + */ goto __pyx_L3; } - /*else*/ { - /* "View.MemoryView":1373 + /* "View.MemoryView":1403 * data += stride * else: * for i in range(extent): # <<<<<<<<<<<<<< * _slice_assign_scalar(data, shape + 1, strides + 1, * ndim - 1, itemsize, item) */ + /*else*/ { __pyx_t_2 = __pyx_v_extent; for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { __pyx_v_i = __pyx_t_3; - /* "View.MemoryView":1374 + /* "View.MemoryView":1404 * else: * for i in range(extent): * _slice_assign_scalar(data, shape + 1, strides + 1, # <<<<<<<<<<<<<< @@ -18345,7 +20971,7 @@ static void __pyx_memoryview__slice_assign_scalar(char *__pyx_v_data, Py_ssize_t */ __pyx_memoryview__slice_assign_scalar(__pyx_v_data, (__pyx_v_shape + 1), (__pyx_v_strides + 1), (__pyx_v_ndim - 1), __pyx_v_itemsize, __pyx_v_item); - /* "View.MemoryView":1376 + /* "View.MemoryView":1406 * _slice_assign_scalar(data, shape + 1, strides + 1, * ndim - 1, itemsize, item) * data += stride # <<<<<<<<<<<<<< @@ -18357,7 +20983,7 @@ static void __pyx_memoryview__slice_assign_scalar(char *__pyx_v_data, Py_ssize_t } __pyx_L3:; - /* "View.MemoryView":1361 + /* "View.MemoryView":1391 * * @cname('__pyx_memoryview__slice_assign_scalar') * cdef void _slice_assign_scalar(char *data, Py_ssize_t *shape, # <<<<<<<<<<<<<< @@ -18367,6 +20993,7 @@ static void __pyx_memoryview__slice_assign_scalar(char *__pyx_v_data, Py_ssize_t /* function exit code */ } +static struct __pyx_vtabstruct_array __pyx_vtable_array; static PyObject *__pyx_tp_new_array(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_array_obj *p; @@ -18378,12 +21005,14 @@ static PyObject *__pyx_tp_new_array(PyTypeObject *t, PyObject *a, PyObject *k) { } if (unlikely(!o)) return 0; p = ((struct __pyx_array_obj *)o); + p->__pyx_vtab = __pyx_vtabptr_array; p->mode = ((PyObject*)Py_None); Py_INCREF(Py_None); p->_format = ((PyObject*)Py_None); Py_INCREF(Py_None); - if (unlikely(__pyx_array___cinit__(o, a, k) < 0)) { - Py_DECREF(o); o = 0; - } + if (unlikely(__pyx_array___cinit__(o, a, k) < 0)) goto bad; return o; + bad: + Py_DECREF(o); o = 0; + return NULL; } static void __pyx_tp_dealloc_array(PyObject *o) { @@ -18434,7 +21063,7 @@ static PyObject *__pyx_tp_getattro_array(PyObject *o, PyObject *n) { } static PyObject *__pyx_getprop___pyx_array_memview(PyObject *o, CYTHON_UNUSED void *x) { - return get_memview(o); + return __pyx_pw_15View_dot_MemoryView_5array_7memview_1__get__(o); } static PyMethodDef __pyx_methods_array[] = { @@ -18443,7 +21072,7 @@ static PyMethodDef __pyx_methods_array[] = { }; static struct PyGetSetDef __pyx_getsets_array[] = { - {(char *)"memview", __pyx_getprop___pyx_array_memview, 0, 0, 0}, + {(char *)"memview", __pyx_getprop___pyx_array_memview, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; @@ -18494,8 +21123,9 @@ static PyTypeObject __pyx_type___pyx_array = { 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ - #else - 0, /*reserved*/ + #endif + #if PY_MAJOR_VERSION >= 3 + 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ @@ -18599,8 +21229,9 @@ static PyTypeObject __pyx_type___pyx_MemviewEnum = { 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ - #else - 0, /*reserved*/ + #endif + #if PY_MAJOR_VERSION >= 3 + 0, /*tp_as_async*/ #endif __pyx_MemviewEnum___repr__, /*tp_repr*/ 0, /*tp_as_number*/ @@ -18661,10 +21292,11 @@ static PyObject *__pyx_tp_new_memoryview(PyTypeObject *t, PyObject *a, PyObject p->_size = Py_None; Py_INCREF(Py_None); p->_array_interface = Py_None; Py_INCREF(Py_None); p->view.obj = NULL; - if (unlikely(__pyx_memoryview___cinit__(o, a, k) < 0)) { - Py_DECREF(o); o = 0; - } + if (unlikely(__pyx_memoryview___cinit__(o, a, k) < 0)) goto bad; return o; + bad: + Py_DECREF(o); o = 0; + return NULL; } static void __pyx_tp_dealloc_memoryview(PyObject *o) { @@ -18742,39 +21374,39 @@ static int __pyx_mp_ass_subscript_memoryview(PyObject *o, PyObject *i, PyObject } static PyObject *__pyx_getprop___pyx_memoryview_T(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_transpose(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_1T_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_base(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview__get__base(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_4base_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_shape(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_shape(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_5shape_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_strides(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_strides(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_7strides_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_suboffsets(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_suboffsets(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_10suboffsets_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_ndim(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_ndim(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_4ndim_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_itemsize(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_itemsize(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_8itemsize_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_nbytes(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_nbytes(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_6nbytes_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_size(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_size(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_4size_1__get__(o); } static PyMethodDef __pyx_methods_memoryview[] = { @@ -18786,15 +21418,15 @@ static PyMethodDef __pyx_methods_memoryview[] = { }; static struct PyGetSetDef __pyx_getsets_memoryview[] = { - {(char *)"T", __pyx_getprop___pyx_memoryview_T, 0, 0, 0}, - {(char *)"base", __pyx_getprop___pyx_memoryview_base, 0, 0, 0}, - {(char *)"shape", __pyx_getprop___pyx_memoryview_shape, 0, 0, 0}, - {(char *)"strides", __pyx_getprop___pyx_memoryview_strides, 0, 0, 0}, - {(char *)"suboffsets", __pyx_getprop___pyx_memoryview_suboffsets, 0, 0, 0}, - {(char *)"ndim", __pyx_getprop___pyx_memoryview_ndim, 0, 0, 0}, - {(char *)"itemsize", __pyx_getprop___pyx_memoryview_itemsize, 0, 0, 0}, - {(char *)"nbytes", __pyx_getprop___pyx_memoryview_nbytes, 0, 0, 0}, - {(char *)"size", __pyx_getprop___pyx_memoryview_size, 0, 0, 0}, + {(char *)"T", __pyx_getprop___pyx_memoryview_T, 0, (char *)0, 0}, + {(char *)"base", __pyx_getprop___pyx_memoryview_base, 0, (char *)0, 0}, + {(char *)"shape", __pyx_getprop___pyx_memoryview_shape, 0, (char *)0, 0}, + {(char *)"strides", __pyx_getprop___pyx_memoryview_strides, 0, (char *)0, 0}, + {(char *)"suboffsets", __pyx_getprop___pyx_memoryview_suboffsets, 0, (char *)0, 0}, + {(char *)"ndim", __pyx_getprop___pyx_memoryview_ndim, 0, (char *)0, 0}, + {(char *)"itemsize", __pyx_getprop___pyx_memoryview_itemsize, 0, (char *)0, 0}, + {(char *)"nbytes", __pyx_getprop___pyx_memoryview_nbytes, 0, (char *)0, 0}, + {(char *)"size", __pyx_getprop___pyx_memoryview_size, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; @@ -18845,8 +21477,9 @@ static PyTypeObject __pyx_type___pyx_memoryview = { 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ - #else - 0, /*reserved*/ + #endif + #if PY_MAJOR_VERSION >= 3 + 0, /*tp_as_async*/ #endif __pyx_memoryview___repr__, /*tp_repr*/ 0, /*tp_as_number*/ @@ -18946,7 +21579,7 @@ static int __pyx_tp_clear__memoryviewslice(PyObject *o) { } static PyObject *__pyx_getprop___pyx_memoryviewslice_base(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryviewslice__get__base(o); + return __pyx_pw_15View_dot_MemoryView_16_memoryviewslice_4base_1__get__(o); } static PyMethodDef __pyx_methods__memoryviewslice[] = { @@ -18954,7 +21587,7 @@ static PyMethodDef __pyx_methods__memoryviewslice[] = { }; static struct PyGetSetDef __pyx_getsets__memoryviewslice[] = { - {(char *)"base", __pyx_getprop___pyx_memoryviewslice_base, 0, 0, 0}, + {(char *)"base", __pyx_getprop___pyx_memoryviewslice_base, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; @@ -18969,8 +21602,9 @@ static PyTypeObject __pyx_type___pyx_memoryviewslice = { 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ - #else - 0, /*reserved*/ + #endif + #if PY_MAJOR_VERSION >= 3 + 0, /*tp_as_async*/ #endif #if CYTHON_COMPILING_IN_PYPY __pyx_memoryview___repr__, /*tp_repr*/ @@ -19047,6 +21681,7 @@ static struct PyModuleDef __pyx_moduledef = { static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_kp_s_02_05_2017, __pyx_k_02_05_2017, sizeof(__pyx_k_02_05_2017), 0, 0, 1, 0}, + {&__pyx_n_s_ASCII, __pyx_k_ASCII, sizeof(__pyx_k_ASCII), 0, 0, 1, 1}, {&__pyx_kp_s_Buffer_view_does_not_expose_stri, __pyx_k_Buffer_view_does_not_expose_stri, sizeof(__pyx_k_Buffer_view_does_not_expose_stri), 0, 0, 1, 0}, {&__pyx_n_s_C_CONTIGUOUS, __pyx_k_C_CONTIGUOUS, sizeof(__pyx_k_C_CONTIGUOUS), 0, 0, 1, 1}, {&__pyx_kp_s_Can_only_create_a_buffer_that_is, __pyx_k_Can_only_create_a_buffer_that_is, sizeof(__pyx_k_Can_only_create_a_buffer_that_is), 0, 0, 1, 0}, @@ -19056,6 +21691,7 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_kp_u_Format_string_allocated_too_shor, __pyx_k_Format_string_allocated_too_shor, sizeof(__pyx_k_Format_string_allocated_too_shor), 0, 1, 0, 0}, {&__pyx_kp_u_Format_string_allocated_too_shor_2, __pyx_k_Format_string_allocated_too_shor_2, sizeof(__pyx_k_Format_string_allocated_too_shor_2), 0, 1, 0, 0}, {&__pyx_kp_s_H_Payno, __pyx_k_H_Payno, sizeof(__pyx_k_H_Payno), 0, 0, 1, 0}, + {&__pyx_n_s_ImportError, __pyx_k_ImportError, sizeof(__pyx_k_ImportError), 0, 0, 1, 1}, {&__pyx_n_s_IndexError, __pyx_k_IndexError, sizeof(__pyx_k_IndexError), 0, 0, 1, 1}, {&__pyx_kp_s_Indirect_dimensions_not_supporte, __pyx_k_Indirect_dimensions_not_supporte, sizeof(__pyx_k_Indirect_dimensions_not_supporte), 0, 0, 1, 0}, {&__pyx_kp_s_Invalid_data_shape_Dimemsion_of, __pyx_k_Invalid_data_shape_Dimemsion_of, sizeof(__pyx_k_Invalid_data_shape_Dimemsion_of), 0, 0, 1, 0}, @@ -19063,12 +21699,14 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_kp_s_Invalid_shape_in_axis_d_d, __pyx_k_Invalid_shape_in_axis_d_d, sizeof(__pyx_k_Invalid_shape_in_axis_d_d), 0, 0, 1, 0}, {&__pyx_kp_s_J_Kieffer, __pyx_k_J_Kieffer, sizeof(__pyx_k_J_Kieffer), 0, 0, 1, 0}, {&__pyx_n_s_MIT, __pyx_k_MIT, sizeof(__pyx_k_MIT), 0, 0, 1, 1}, + {&__pyx_n_s_MODES, __pyx_k_MODES, sizeof(__pyx_k_MODES), 0, 0, 1, 1}, {&__pyx_n_s_MemoryError, __pyx_k_MemoryError, sizeof(__pyx_k_MemoryError), 0, 0, 1, 1}, {&__pyx_kp_s_MemoryView_of_r_at_0x_x, __pyx_k_MemoryView_of_r_at_0x_x, sizeof(__pyx_k_MemoryView_of_r_at_0x_x), 0, 0, 1, 0}, {&__pyx_kp_s_MemoryView_of_r_object, __pyx_k_MemoryView_of_r_object, sizeof(__pyx_k_MemoryView_of_r_object), 0, 0, 1, 0}, {&__pyx_kp_u_Non_native_byte_order_not_suppor, __pyx_k_Non_native_byte_order_not_suppor, sizeof(__pyx_k_Non_native_byte_order_not_suppor), 0, 1, 0, 0}, {&__pyx_n_b_O, __pyx_k_O, sizeof(__pyx_k_O), 0, 0, 0, 1}, {&__pyx_kp_s_Out_of_bounds_on_buffer_access_a, __pyx_k_Out_of_bounds_on_buffer_access_a, sizeof(__pyx_k_Out_of_bounds_on_buffer_access_a), 0, 0, 1, 0}, + {&__pyx_kp_s_Requested_mode_s_is_unknowed, __pyx_k_Requested_mode_s_is_unknowed, sizeof(__pyx_k_Requested_mode_s_is_unknowed), 0, 0, 1, 0}, {&__pyx_n_s_RuntimeError, __pyx_k_RuntimeError, sizeof(__pyx_k_RuntimeError), 0, 0, 1, 1}, {&__pyx_n_s_TypeError, __pyx_k_TypeError, sizeof(__pyx_k_TypeError), 0, 0, 1, 1}, {&__pyx_kp_s_Unable_to_convert_item_to_object, __pyx_k_Unable_to_convert_item_to_object, sizeof(__pyx_k_Unable_to_convert_item_to_object), 0, 0, 1, 0}, @@ -19089,7 +21727,9 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s_date, __pyx_k_date, sizeof(__pyx_k_date), 0, 0, 1, 1}, {&__pyx_n_s_dtype, __pyx_k_dtype, sizeof(__pyx_k_dtype), 0, 0, 1, 1}, {&__pyx_n_s_dtype_is_object, __pyx_k_dtype_is_object, sizeof(__pyx_k_dtype_is_object), 0, 0, 1, 1}, + {&__pyx_n_s_encode, __pyx_k_encode, sizeof(__pyx_k_encode), 0, 0, 1, 1}, {&__pyx_n_s_enumerate, __pyx_k_enumerate, sizeof(__pyx_k_enumerate), 0, 0, 1, 1}, + {&__pyx_n_s_err, __pyx_k_err, sizeof(__pyx_k_err), 0, 0, 1, 1}, {&__pyx_n_s_error, __pyx_k_error, sizeof(__pyx_k_error), 0, 0, 1, 1}, {&__pyx_n_s_flags, __pyx_k_flags, sizeof(__pyx_k_flags), 0, 0, 1, 1}, {&__pyx_n_s_float32, __pyx_k_float32, sizeof(__pyx_k_float32), 0, 0, 1, 1}, @@ -19102,6 +21742,7 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s_image, __pyx_k_image, sizeof(__pyx_k_image), 0, 0, 1, 1}, {&__pyx_n_s_image_dim, __pyx_k_image_dim, sizeof(__pyx_k_image_dim), 0, 0, 1, 1}, {&__pyx_n_s_import, __pyx_k_import, sizeof(__pyx_k_import), 0, 0, 1, 1}, + {&__pyx_n_s_index, __pyx_k_index, sizeof(__pyx_k_index), 0, 0, 1, 1}, {&__pyx_n_s_input_buffer, __pyx_k_input_buffer, sizeof(__pyx_k_input_buffer), 0, 0, 1, 1}, {&__pyx_kp_s_input_buffer_and_output_buffer_m, __pyx_k_input_buffer_and_output_buffer_m, sizeof(__pyx_k_input_buffer_and_output_buffer_m), 0, 0, 1, 0}, {&__pyx_kp_s_input_buffer_and_output_buffer_m_2, __pyx_k_input_buffer_and_output_buffer_m_2, sizeof(__pyx_k_input_buffer_and_output_buffer_m_2), 0, 0, 1, 0}, @@ -19114,6 +21755,7 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_kp_s_itemsize_0_for_cython_array, __pyx_k_itemsize_0_for_cython_array, sizeof(__pyx_k_itemsize_0_for_cython_array), 0, 0, 1, 0}, {&__pyx_n_s_ker_dim, __pyx_k_ker_dim, sizeof(__pyx_k_ker_dim), 0, 0, 1, 1}, {&__pyx_n_s_kernel_size, __pyx_k_kernel_size, sizeof(__pyx_k_kernel_size), 0, 0, 1, 1}, + {&__pyx_n_s_length_max, __pyx_k_length_max, sizeof(__pyx_k_length_max), 0, 0, 1, 1}, {&__pyx_n_s_license, __pyx_k_license, sizeof(__pyx_k_license), 0, 0, 1, 1}, {&__pyx_n_s_main, __pyx_k_main, sizeof(__pyx_k_main), 0, 0, 1, 1}, {&__pyx_n_s_medfilt, __pyx_k_medfilt, sizeof(__pyx_k_medfilt), 0, 0, 1, 1}, @@ -19129,13 +21771,17 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s_median_filter_uint32, __pyx_k_median_filter_uint32, sizeof(__pyx_k_median_filter_uint32), 0, 0, 1, 1}, {&__pyx_n_s_median_filter_uint64, __pyx_k_median_filter_uint64, sizeof(__pyx_k_median_filter_uint64), 0, 0, 1, 1}, {&__pyx_n_s_memview, __pyx_k_memview, sizeof(__pyx_k_memview), 0, 0, 1, 1}, + {&__pyx_n_s_mirror, __pyx_k_mirror, sizeof(__pyx_k_mirror), 0, 0, 1, 1}, {&__pyx_n_s_mode, __pyx_k_mode, sizeof(__pyx_k_mode), 0, 0, 1, 1}, {&__pyx_n_s_name, __pyx_k_name, sizeof(__pyx_k_name), 0, 0, 1, 1}, {&__pyx_n_s_name_2, __pyx_k_name_2, sizeof(__pyx_k_name_2), 0, 0, 1, 1}, {&__pyx_kp_u_ndarray_is_not_C_contiguous, __pyx_k_ndarray_is_not_C_contiguous, sizeof(__pyx_k_ndarray_is_not_C_contiguous), 0, 1, 0, 0}, {&__pyx_kp_u_ndarray_is_not_Fortran_contiguou, __pyx_k_ndarray_is_not_Fortran_contiguou, sizeof(__pyx_k_ndarray_is_not_Fortran_contiguou), 0, 1, 0, 0}, {&__pyx_n_s_ndim, __pyx_k_ndim, sizeof(__pyx_k_ndim), 0, 0, 1, 1}, + {&__pyx_n_s_nearest, __pyx_k_nearest, sizeof(__pyx_k_nearest), 0, 0, 1, 1}, {&__pyx_n_s_numpy, __pyx_k_numpy, sizeof(__pyx_k_numpy), 0, 0, 1, 1}, + {&__pyx_kp_s_numpy_core_multiarray_failed_to, __pyx_k_numpy_core_multiarray_failed_to, sizeof(__pyx_k_numpy_core_multiarray_failed_to), 0, 0, 1, 0}, + {&__pyx_kp_s_numpy_core_umath_failed_to_impor, __pyx_k_numpy_core_umath_failed_to_impor, sizeof(__pyx_k_numpy_core_umath_failed_to_impor), 0, 0, 1, 0}, {&__pyx_n_s_obj, __pyx_k_obj, sizeof(__pyx_k_obj), 0, 0, 1, 1}, {&__pyx_n_s_output_buffer, __pyx_k_output_buffer, sizeof(__pyx_k_output_buffer), 0, 0, 1, 1}, {&__pyx_kp_s_output_buffer_dimension_must_mo, __pyx_k_output_buffer_dimension_must_mo, sizeof(__pyx_k_output_buffer_dimension_must_mo), 0, 0, 1, 0}, @@ -19144,10 +21790,12 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s_pyx_getbuffer, __pyx_k_pyx_getbuffer, sizeof(__pyx_k_pyx_getbuffer), 0, 0, 1, 1}, {&__pyx_n_s_pyx_vtable, __pyx_k_pyx_vtable, sizeof(__pyx_k_pyx_vtable), 0, 0, 1, 1}, {&__pyx_n_s_range, __pyx_k_range, sizeof(__pyx_k_range), 0, 0, 1, 1}, + {&__pyx_n_s_reflect, __pyx_k_reflect, sizeof(__pyx_k_reflect), 0, 0, 1, 1}, {&__pyx_n_s_reshape, __pyx_k_reshape, sizeof(__pyx_k_reshape), 0, 0, 1, 1}, {&__pyx_n_s_reshaped, __pyx_k_reshaped, sizeof(__pyx_k_reshaped), 0, 0, 1, 1}, {&__pyx_kp_s_s_type_is_not_managed_by_the_me, __pyx_k_s_type_is_not_managed_by_the_me, sizeof(__pyx_k_s_type_is_not_managed_by_the_me), 0, 0, 1, 0}, {&__pyx_n_s_shape, __pyx_k_shape, sizeof(__pyx_k_shape), 0, 0, 1, 1}, + {&__pyx_n_s_shrink, __pyx_k_shrink, sizeof(__pyx_k_shrink), 0, 0, 1, 1}, {&__pyx_n_s_silx_math_medianfilter_medianfil, __pyx_k_silx_math_medianfilter_medianfil, sizeof(__pyx_k_silx_math_medianfilter_medianfil), 0, 0, 1, 1}, {&__pyx_n_s_size, __pyx_k_size, sizeof(__pyx_k_size), 0, 0, 1, 1}, {&__pyx_n_s_start, __pyx_k_start, sizeof(__pyx_k_start), 0, 0, 1, 1}, @@ -19165,27 +21813,22 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_kp_s_unable_to_allocate_shape_and_str, __pyx_k_unable_to_allocate_shape_and_str, sizeof(__pyx_k_unable_to_allocate_shape_and_str), 0, 0, 1, 0}, {&__pyx_kp_u_unknown_dtype_code_in_numpy_pxd, __pyx_k_unknown_dtype_code_in_numpy_pxd, sizeof(__pyx_k_unknown_dtype_code_in_numpy_pxd), 0, 1, 0, 0}, {&__pyx_n_s_unpack, __pyx_k_unpack, sizeof(__pyx_k_unpack), 0, 0, 1, 1}, - {&__pyx_kp_s_users_payno_Documents_dev_esrf, __pyx_k_users_payno_Documents_dev_esrf, sizeof(__pyx_k_users_payno_Documents_dev_esrf), 0, 0, 1, 0}, - {&__pyx_n_s_x, __pyx_k_x, sizeof(__pyx_k_x), 0, 0, 1, 1}, - {&__pyx_n_s_xrange, __pyx_k_xrange, sizeof(__pyx_k_xrange), 0, 0, 1, 1}, + {&__pyx_kp_s_users_kieffer_workspace_400_rel, __pyx_k_users_kieffer_workspace_400_rel, sizeof(__pyx_k_users_kieffer_workspace_400_rel), 0, 0, 1, 0}, + {&__pyx_n_s_y, __pyx_k_y, sizeof(__pyx_k_y), 0, 0, 1, 1}, {&__pyx_n_s_zeros_like, __pyx_k_zeros_like, sizeof(__pyx_k_zeros_like), 0, 0, 1, 1}, {0, 0, 0, 0, 0, 0, 0} }; static int __Pyx_InitCachedBuiltins(void) { - __pyx_builtin_ValueError = __Pyx_GetBuiltinName(__pyx_n_s_ValueError); if (!__pyx_builtin_ValueError) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 101; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_builtin_range = __Pyx_GetBuiltinName(__pyx_n_s_range); if (!__pyx_builtin_range) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 228; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_builtin_RuntimeError = __Pyx_GetBuiltinName(__pyx_n_s_RuntimeError); if (!__pyx_builtin_RuntimeError) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 799; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_builtin_MemoryError = 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if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 362; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_4silx_4math_12medianfilter_12medianfilter_27_median_filter_uint16, NULL, __pyx_n_s_silx_math_medianfilter_medianfil); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 411, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); - if (PyDict_SetItem(__pyx_d, __pyx_n_s_median_filter_uint16, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 362; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_d, __pyx_n_s_median_filter_uint16, __pyx_t_1) < 0) __PYX_ERR(0, 411, __pyx_L1_error) __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; /* "silx/math/medianfilter/medianfilter.pyx":1 @@ -20017,121 +22783,147 @@ PyMODINIT_FUNC PyInit_medianfilter(void) * # /[inserted by cython to avoid comment start]*########################################################################## * # */ - __pyx_t_1 = PyDict_New(); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; 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if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 953; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __pyx_capsule_create(((void *)(&__pyx_memoryview_getbuffer)), ((char *)"getbuffer(obj, view, flags)")); if (unlikely(!__pyx_t_1)) __PYX_ERR(2, 981, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); - if (PyDict_SetItem(__pyx_memoryviewslice_type->tp_dict, __pyx_n_s_pyx_getbuffer, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 953; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_memoryviewslice_type->tp_dict, __pyx_n_s_pyx_getbuffer, __pyx_t_1) < 0) __PYX_ERR(2, 981, __pyx_L1_error) __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; PyType_Modified(__pyx_memoryviewslice_type); - /* "View.MemoryView":1361 + /* "View.MemoryView":1391 * * @cname('__pyx_memoryview__slice_assign_scalar') * cdef void _slice_assign_scalar(char *data, Py_ssize_t *shape, # <<<<<<<<<<<<<< @@ -20161,7 +22953,8 @@ PyMODINIT_FUNC PyInit_medianfilter(void) #endif } -/* Runtime support code */ +/* --- Runtime support code --- */ +/* Refnanny */ #if CYTHON_REFNANNY static __Pyx_RefNannyAPIStruct *__Pyx_RefNannyImportAPI(const char *modname) { PyObject *m = NULL, *p = NULL; @@ -20178,6 +22971,7 @@ end: } #endif +/* GetBuiltinName */ static PyObject *__Pyx_GetBuiltinName(PyObject *name) { PyObject* result = __Pyx_PyObject_GetAttrStr(__pyx_b, name); if (unlikely(!result)) { @@ -20191,6 +22985,7 @@ static PyObject *__Pyx_GetBuiltinName(PyObject *name) { return result; } +/* RaiseDoubleKeywords */ static void __Pyx_RaiseDoubleKeywordsError( const char* func_name, PyObject* kw_name) @@ -20204,6 +22999,7 @@ static void __Pyx_RaiseDoubleKeywordsError( #endif } +/* ParseKeywords */ static int __Pyx_ParseOptionalKeywords( PyObject *kwds, PyObject **argnames[], @@ -20305,6 +23101,7 @@ bad: return -1; } +/* RaiseArgTupleInvalid */ static void __Pyx_RaiseArgtupleInvalid( const char* func_name, int exact, @@ -20330,9 +23127,10 @@ static void __Pyx_RaiseArgtupleInvalid( (num_expected == 1) ? "" : "s", num_found); } +/* GetModuleGlobalName */ static CYTHON_INLINE PyObject *__Pyx_GetModuleGlobalName(PyObject *name) { PyObject *result; -#if CYTHON_COMPILING_IN_CPYTHON +#if !CYTHON_AVOID_BORROWED_REFS result = PyDict_GetItem(__pyx_d, name); if (likely(result)) { Py_INCREF(result); @@ -20347,7 +23145,146 @@ static CYTHON_INLINE PyObject *__Pyx_GetModuleGlobalName(PyObject *name) { return result; } -#if CYTHON_COMPILING_IN_CPYTHON +/* PyFunctionFastCall */ + #if CYTHON_FAST_PYCALL +#include "frameobject.h" +static PyObject* __Pyx_PyFunction_FastCallNoKw(PyCodeObject *co, PyObject **args, Py_ssize_t na, + PyObject *globals) { + PyFrameObject *f; + PyThreadState *tstate = PyThreadState_GET(); + PyObject **fastlocals; + Py_ssize_t i; + PyObject *result; + assert(globals != NULL); + /* XXX Perhaps we should create a specialized + PyFrame_New() that doesn't take locals, but does + take builtins without sanity checking them. + */ + assert(tstate != NULL); + f = PyFrame_New(tstate, co, globals, NULL); + if (f == NULL) { + return NULL; + } + fastlocals = f->f_localsplus; + for (i = 0; i < na; i++) { + Py_INCREF(*args); + fastlocals[i] = *args++; + } + result = PyEval_EvalFrameEx(f,0); + ++tstate->recursion_depth; + Py_DECREF(f); + --tstate->recursion_depth; + return result; +} +#if 1 || PY_VERSION_HEX < 0x030600B1 +static PyObject *__Pyx_PyFunction_FastCallDict(PyObject *func, PyObject **args, int nargs, PyObject *kwargs) { + PyCodeObject *co = (PyCodeObject *)PyFunction_GET_CODE(func); + PyObject *globals = PyFunction_GET_GLOBALS(func); + PyObject *argdefs = PyFunction_GET_DEFAULTS(func); + PyObject *closure; +#if PY_MAJOR_VERSION >= 3 + PyObject *kwdefs; +#endif + PyObject *kwtuple, **k; + PyObject **d; + Py_ssize_t nd; + Py_ssize_t nk; + PyObject *result; + assert(kwargs == NULL || PyDict_Check(kwargs)); + nk = kwargs ? PyDict_Size(kwargs) : 0; + if (Py_EnterRecursiveCall((char*)" while calling a Python object")) { + return NULL; + } + if ( +#if PY_MAJOR_VERSION >= 3 + co->co_kwonlyargcount == 0 && +#endif + likely(kwargs == NULL || nk == 0) && + co->co_flags == (CO_OPTIMIZED | CO_NEWLOCALS | CO_NOFREE)) { + if (argdefs == NULL && co->co_argcount == nargs) { + result = __Pyx_PyFunction_FastCallNoKw(co, args, nargs, globals); + goto done; + } + else if (nargs == 0 && argdefs != NULL + && co->co_argcount == Py_SIZE(argdefs)) { + /* function called with no arguments, but all parameters have + a default value: use default values as arguments .*/ + args = &PyTuple_GET_ITEM(argdefs, 0); + result =__Pyx_PyFunction_FastCallNoKw(co, args, Py_SIZE(argdefs), globals); + goto done; + } + } + if (kwargs != NULL) { + Py_ssize_t pos, i; + kwtuple = PyTuple_New(2 * nk); + if (kwtuple == NULL) { + result = NULL; + goto done; + } + k = &PyTuple_GET_ITEM(kwtuple, 0); + pos = i = 0; + while (PyDict_Next(kwargs, &pos, &k[i], &k[i+1])) { + Py_INCREF(k[i]); + Py_INCREF(k[i+1]); + i += 2; + } + nk = i / 2; + } + else { + kwtuple = NULL; + k = NULL; + } + closure = PyFunction_GET_CLOSURE(func); +#if PY_MAJOR_VERSION >= 3 + kwdefs = PyFunction_GET_KW_DEFAULTS(func); +#endif + if (argdefs != NULL) { + d = &PyTuple_GET_ITEM(argdefs, 0); + nd = Py_SIZE(argdefs); + } + else { + d = NULL; + nd = 0; + } +#if PY_MAJOR_VERSION >= 3 + result = PyEval_EvalCodeEx((PyObject*)co, globals, (PyObject *)NULL, + args, nargs, + k, (int)nk, + d, (int)nd, kwdefs, closure); +#else + result = PyEval_EvalCodeEx(co, globals, (PyObject *)NULL, + args, nargs, + k, (int)nk, + d, (int)nd, closure); +#endif + Py_XDECREF(kwtuple); +done: + Py_LeaveRecursiveCall(); + return result; +} +#endif // CPython < 3.6 +#endif // CYTHON_FAST_PYCALL + +/* PyCFunctionFastCall */ + #if CYTHON_FAST_PYCCALL +static CYTHON_INLINE PyObject * __Pyx_PyCFunction_FastCall(PyObject *func_obj, PyObject **args, Py_ssize_t nargs) { + PyCFunctionObject *func = (PyCFunctionObject*)func_obj; + PyCFunction meth = PyCFunction_GET_FUNCTION(func); + PyObject *self = PyCFunction_GET_SELF(func); + assert(PyCFunction_Check(func)); + assert(METH_FASTCALL == (PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST))); + assert(nargs >= 0); + assert(nargs == 0 || args != NULL); + /* _PyCFunction_FastCallDict() must not be called with an exception set, + because it may clear it (directly or indirectly) and so the + caller loses its exception */ + assert(!PyErr_Occurred()); + return (*((__Pyx_PyCFunctionFast)meth)) (self, args, nargs, NULL); +} +#endif // CYTHON_FAST_PYCCALL + +/* PyObjectCall */ + #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw) { PyObject *result; ternaryfunc call = func->ob_type->tp_call; @@ -20366,88 +23303,10 @@ static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg } #endif -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j) { - PyObject *r; - if (!j) return NULL; - r = PyObject_GetItem(o, j); - Py_DECREF(j); - return r; -} -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, - int wraparound, int boundscheck) { -#if CYTHON_COMPILING_IN_CPYTHON - if (wraparound & unlikely(i < 0)) i += PyList_GET_SIZE(o); - if ((!boundscheck) || likely((0 <= i) & (i < PyList_GET_SIZE(o)))) { - PyObject *r = PyList_GET_ITEM(o, i); - Py_INCREF(r); - return r; - } - return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); -#else - return PySequence_GetItem(o, i); -#endif -} -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, - int wraparound, int boundscheck) { -#if CYTHON_COMPILING_IN_CPYTHON - if (wraparound & unlikely(i < 0)) i += PyTuple_GET_SIZE(o); - if ((!boundscheck) || likely((0 <= i) & (i < PyTuple_GET_SIZE(o)))) { - PyObject *r = PyTuple_GET_ITEM(o, i); - Py_INCREF(r); - return r; - } - return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); -#else - return PySequence_GetItem(o, i); -#endif -} -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i, - int is_list, int wraparound, int boundscheck) { -#if CYTHON_COMPILING_IN_CPYTHON - if (is_list || PyList_CheckExact(o)) { - Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyList_GET_SIZE(o); - if ((!boundscheck) || (likely((n >= 0) & (n < PyList_GET_SIZE(o))))) { - PyObject *r = PyList_GET_ITEM(o, n); - Py_INCREF(r); - return r; - } - } - else if (PyTuple_CheckExact(o)) { - Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyTuple_GET_SIZE(o); - if ((!boundscheck) || likely((n >= 0) & (n < PyTuple_GET_SIZE(o)))) { - PyObject *r = PyTuple_GET_ITEM(o, n); - Py_INCREF(r); - return r; - } - } else { - PySequenceMethods *m = Py_TYPE(o)->tp_as_sequence; - if (likely(m && m->sq_item)) { - if (wraparound && unlikely(i < 0) && likely(m->sq_length)) { - Py_ssize_t l = m->sq_length(o); - if (likely(l >= 0)) { - i += l; - } else { - if (PyErr_ExceptionMatches(PyExc_OverflowError)) - PyErr_Clear(); - else - return NULL; - } - } - return m->sq_item(o, i); - } - } -#else - if (is_list || PySequence_Check(o)) { - return PySequence_GetItem(o, i); - } -#endif - return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); -} - -static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb) { -#if CYTHON_COMPILING_IN_CPYTHON +/* PyErrFetchRestore */ + #if CYTHON_FAST_THREAD_STATE +static CYTHON_INLINE void __Pyx_ErrRestoreInState(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb) { PyObject *tmp_type, *tmp_value, *tmp_tb; - PyThreadState *tstate = PyThreadState_GET(); tmp_type = tstate->curexc_type; tmp_value = tstate->curexc_value; tmp_tb = tstate->curexc_traceback; @@ -20457,27 +23316,22 @@ static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyOb Py_XDECREF(tmp_type); Py_XDECREF(tmp_value); Py_XDECREF(tmp_tb); -#else - PyErr_Restore(type, value, tb); -#endif } -static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) { -#if CYTHON_COMPILING_IN_CPYTHON - PyThreadState *tstate = PyThreadState_GET(); +static CYTHON_INLINE void __Pyx_ErrFetchInState(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { *type = tstate->curexc_type; *value = tstate->curexc_value; *tb = tstate->curexc_traceback; tstate->curexc_type = 0; tstate->curexc_value = 0; tstate->curexc_traceback = 0; -#else - PyErr_Fetch(type, value, tb); -#endif } +#endif -#if PY_MAJOR_VERSION < 3 +/* RaiseException */ + #if PY_MAJOR_VERSION < 3 static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, CYTHON_UNUSED PyObject *cause) { + __Pyx_PyThreadState_declare Py_XINCREF(type); if (!value || value == Py_None) value = NULL; @@ -20516,6 +23370,7 @@ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, goto raise_error; } } + __Pyx_PyThreadState_assign __Pyx_ErrRestore(type, value, tb); return; raise_error: @@ -20549,10 +23404,13 @@ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject if (value && PyExceptionInstance_Check(value)) { instance_class = (PyObject*) Py_TYPE(value); if (instance_class != type) { - if (PyObject_IsSubclass(instance_class, type)) { - type = instance_class; - } else { + int is_subclass = PyObject_IsSubclass(instance_class, type); + if (!is_subclass) { instance_class = NULL; + } else if (unlikely(is_subclass == -1)) { + goto bad; + } else { + type = instance_class; } } } @@ -20612,7 +23470,7 @@ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject if (tb) { #if CYTHON_COMPILING_IN_PYPY PyObject *tmp_type, *tmp_value, *tmp_tb; - PyErr_Fetch(tmp_type, tmp_value, tmp_tb); + PyErr_Fetch(&tmp_type, &tmp_value, &tmp_tb); Py_INCREF(tb); PyErr_Restore(tmp_type, tmp_value, tb); Py_XDECREF(tmp_tb); @@ -20632,7 +23490,89 @@ bad: } #endif -#if CYTHON_COMPILING_IN_CPYTHON +/* GetItemInt */ + static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j) { + PyObject *r; + if (!j) return NULL; + r = PyObject_GetItem(o, j); + Py_DECREF(j); + return r; +} +static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, + CYTHON_NCP_UNUSED int wraparound, + CYTHON_NCP_UNUSED int boundscheck) { +#if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS + if (wraparound & unlikely(i < 0)) i += PyList_GET_SIZE(o); + if ((!boundscheck) || likely((0 <= i) & (i < PyList_GET_SIZE(o)))) { + PyObject *r = PyList_GET_ITEM(o, i); + Py_INCREF(r); + return r; + } + return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); +#else + return PySequence_GetItem(o, i); +#endif +} +static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, + CYTHON_NCP_UNUSED int wraparound, + CYTHON_NCP_UNUSED int boundscheck) { +#if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS + if (wraparound & unlikely(i < 0)) i += PyTuple_GET_SIZE(o); + if ((!boundscheck) || likely((0 <= i) & (i < PyTuple_GET_SIZE(o)))) { + PyObject *r = PyTuple_GET_ITEM(o, i); + Py_INCREF(r); + return r; + } + return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); +#else + return PySequence_GetItem(o, i); +#endif +} +static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i, int is_list, + CYTHON_NCP_UNUSED int wraparound, + CYTHON_NCP_UNUSED int boundscheck) { +#if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS && CYTHON_USE_TYPE_SLOTS + if (is_list || PyList_CheckExact(o)) { + Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyList_GET_SIZE(o); + if ((!boundscheck) || (likely((n >= 0) & (n < PyList_GET_SIZE(o))))) { + PyObject *r = PyList_GET_ITEM(o, n); + Py_INCREF(r); + return r; + } + } + else if (PyTuple_CheckExact(o)) { + Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyTuple_GET_SIZE(o); + if ((!boundscheck) || likely((n >= 0) & (n < PyTuple_GET_SIZE(o)))) { + PyObject *r = PyTuple_GET_ITEM(o, n); + Py_INCREF(r); + return r; + } + } else { + PySequenceMethods *m = Py_TYPE(o)->tp_as_sequence; + if (likely(m && m->sq_item)) { + if (wraparound && unlikely(i < 0) && likely(m->sq_length)) { + Py_ssize_t l = m->sq_length(o); + if (likely(l >= 0)) { + i += l; + } else { + if (!PyErr_ExceptionMatches(PyExc_OverflowError)) + return NULL; + PyErr_Clear(); + } + } + return m->sq_item(o, i); + } + } +#else + if (is_list || PySequence_Check(o)) { + return PySequence_GetItem(o, i); + } +#endif + return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); +} + +/* PyObjectCallMethO */ + #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg) { PyObject *self, *result; PyCFunction cfunc; @@ -20651,7 +23591,8 @@ static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject } #endif -#if CYTHON_COMPILING_IN_CPYTHON +/* PyObjectCallOneArg */ + #if CYTHON_COMPILING_IN_CPYTHON static PyObject* __Pyx__PyObject_CallOneArg(PyObject *func, PyObject *arg) { PyObject *result; PyObject *args = PyTuple_New(1); @@ -20663,6 +23604,11 @@ static PyObject* __Pyx__PyObject_CallOneArg(PyObject *func, PyObject *arg) { return result; } static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) { +#if CYTHON_FAST_PYCALL + if (PyFunction_Check(func)) { + return __Pyx_PyFunction_FastCall(func, &arg, 1); + } +#endif #ifdef __Pyx_CyFunction_USED if (likely(PyCFunction_Check(func) || PyObject_TypeCheck(func, __pyx_CyFunctionType))) { #else @@ -20670,18 +23616,27 @@ static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObjec #endif if (likely(PyCFunction_GET_FLAGS(func) & METH_O)) { return __Pyx_PyObject_CallMethO(func, arg); +#if CYTHON_FAST_PYCCALL + } else if (PyCFunction_GET_FLAGS(func) & METH_FASTCALL) { + return __Pyx_PyCFunction_FastCall(func, &arg, 1); +#endif } } return __Pyx__PyObject_CallOneArg(func, arg); } #else static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) { - PyObject* args = PyTuple_Pack(1, arg); - return (likely(args)) ? __Pyx_PyObject_Call(func, args, NULL) : NULL; + PyObject *result; + PyObject *args = PyTuple_Pack(1, arg); + if (unlikely(!args)) return NULL; + result = __Pyx_PyObject_Call(func, args, NULL); + Py_DECREF(args); + return result; } #endif -static CYTHON_INLINE int __Pyx_IsLittleEndian(void) { +/* BufferFormatCheck */ + static CYTHON_INLINE int __Pyx_IsLittleEndian(void) { unsigned int n = 1; return *(unsigned char*)(&n) != 0; } @@ -21230,7 +24185,8 @@ static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info) { __Pyx_ReleaseBuffer(info); } -static int +/* MemviewSliceInit */ + static int __Pyx_init_memviewslice(struct __pyx_memoryview_obj *memview, int ndim, __Pyx_memviewslice *memviewslice, @@ -21286,7 +24242,6 @@ no_fail: static CYTHON_INLINE void __pyx_fatalerror(const char *fmt, ...) { va_list vargs; char msg[200]; - va_start(vargs, fmt); #ifdef HAVE_STDARG_PROTOTYPES va_start(vargs, fmt); #else @@ -21365,7 +24320,8 @@ static CYTHON_INLINE void __Pyx_XDEC_MEMVIEW(__Pyx_memviewslice *memslice, } } -static void __Pyx_RaiseArgumentTypeInvalid(const char* name, PyObject *obj, PyTypeObject *type) { +/* ArgTypeTest */ + static void __Pyx_RaiseArgumentTypeInvalid(const char* name, PyObject *obj, PyTypeObject *type) { PyErr_Format(PyExc_TypeError, "Argument '%.200s' has incorrect type (expected %.200s, got %.200s)", name, type->tp_name, Py_TYPE(obj)->tp_name); @@ -21391,22 +24347,26 @@ static CYTHON_INLINE int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, in return 0; } -static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected) { +/* RaiseTooManyValuesToUnpack */ + static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected) { PyErr_Format(PyExc_ValueError, "too many values to unpack (expected %" CYTHON_FORMAT_SSIZE_T "d)", expected); } -static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index) { +/* RaiseNeedMoreValuesToUnpack */ + static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index) { PyErr_Format(PyExc_ValueError, "need more than %" CYTHON_FORMAT_SSIZE_T "d value%.1s to unpack", index, (index == 1) ? "" : "s"); } -static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void) { +/* RaiseNoneIterError */ + static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void) { PyErr_SetString(PyExc_TypeError, "'NoneType' object is not iterable"); } -static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) { +/* ExtTypeTest */ + static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) { if (unlikely(!type)) { PyErr_SetString(PyExc_SystemError, "Missing type object"); return 0; @@ -21418,7 +24378,103 @@ static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) { return 0; } -static CYTHON_INLINE int __Pyx_PyBytes_Equals(PyObject* s1, PyObject* s2, int equals) { +/* SaveResetException */ + #if CYTHON_FAST_THREAD_STATE +static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { + *type = tstate->exc_type; + *value = tstate->exc_value; + *tb = tstate->exc_traceback; + Py_XINCREF(*type); + Py_XINCREF(*value); + Py_XINCREF(*tb); +} +static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb) { + PyObject *tmp_type, *tmp_value, *tmp_tb; + tmp_type = tstate->exc_type; + tmp_value = tstate->exc_value; + tmp_tb = tstate->exc_traceback; + tstate->exc_type = type; + tstate->exc_value = value; + tstate->exc_traceback = tb; + Py_XDECREF(tmp_type); + Py_XDECREF(tmp_value); + Py_XDECREF(tmp_tb); +} +#endif + +/* PyErrExceptionMatches */ + #if CYTHON_FAST_THREAD_STATE +static CYTHON_INLINE int __Pyx_PyErr_ExceptionMatchesInState(PyThreadState* tstate, PyObject* err) { + PyObject *exc_type = tstate->curexc_type; + if (exc_type == err) return 1; + if (unlikely(!exc_type)) return 0; + return PyErr_GivenExceptionMatches(exc_type, err); +} +#endif + +/* GetException */ + #if CYTHON_FAST_THREAD_STATE +static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { +#else +static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) { +#endif + PyObject *local_type, *local_value, *local_tb; +#if CYTHON_FAST_THREAD_STATE + PyObject *tmp_type, *tmp_value, *tmp_tb; + local_type = tstate->curexc_type; + local_value = tstate->curexc_value; + local_tb = tstate->curexc_traceback; + tstate->curexc_type = 0; + tstate->curexc_value = 0; + tstate->curexc_traceback = 0; +#else + PyErr_Fetch(&local_type, &local_value, &local_tb); +#endif + PyErr_NormalizeException(&local_type, &local_value, &local_tb); +#if CYTHON_FAST_THREAD_STATE + if (unlikely(tstate->curexc_type)) +#else + if (unlikely(PyErr_Occurred())) +#endif + goto bad; + #if PY_MAJOR_VERSION >= 3 + if (local_tb) { + if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0)) + goto bad; + } + #endif + Py_XINCREF(local_tb); + Py_XINCREF(local_type); + Py_XINCREF(local_value); + *type = local_type; + *value = local_value; + *tb = local_tb; +#if CYTHON_FAST_THREAD_STATE + tmp_type = tstate->exc_type; + tmp_value = tstate->exc_value; + tmp_tb = tstate->exc_traceback; + tstate->exc_type = local_type; + tstate->exc_value = local_value; + tstate->exc_traceback = local_tb; + Py_XDECREF(tmp_type); + Py_XDECREF(tmp_value); + Py_XDECREF(tmp_tb); +#else + PyErr_SetExcInfo(local_type, local_value, local_tb); +#endif + return 0; +bad: + *type = 0; + *value = 0; + *tb = 0; + Py_XDECREF(local_type); + Py_XDECREF(local_value); + Py_XDECREF(local_tb); + return -1; +} + +/* BytesEquals */ + static CYTHON_INLINE int __Pyx_PyBytes_Equals(PyObject* s1, PyObject* s2, int equals) { #if CYTHON_COMPILING_IN_PYPY return PyObject_RichCompareBool(s1, s2, equals); #else @@ -21455,7 +24511,8 @@ static CYTHON_INLINE int __Pyx_PyBytes_Equals(PyObject* s1, PyObject* s2, int eq #endif } -static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals) { +/* UnicodeEquals */ + static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals) { #if CYTHON_COMPILING_IN_PYPY return PyObject_RichCompareBool(s1, s2, equals); #else @@ -21538,14 +24595,16 @@ return_ne: #endif } -static CYTHON_INLINE Py_ssize_t __Pyx_div_Py_ssize_t(Py_ssize_t a, Py_ssize_t b) { +/* None */ + static CYTHON_INLINE Py_ssize_t __Pyx_div_Py_ssize_t(Py_ssize_t a, Py_ssize_t b) { Py_ssize_t q = a / b; Py_ssize_t r = a - q*b; q -= ((r != 0) & ((r ^ b) < 0)); return q; } -static CYTHON_INLINE PyObject *__Pyx_GetAttr(PyObject *o, PyObject *n) { +/* GetAttr */ + static CYTHON_INLINE PyObject *__Pyx_GetAttr(PyObject *o, PyObject *n) { #if CYTHON_COMPILING_IN_CPYTHON #if PY_MAJOR_VERSION >= 3 if (likely(PyUnicode_Check(n))) @@ -21557,13 +24616,20 @@ static CYTHON_INLINE PyObject *__Pyx_GetAttr(PyObject *o, PyObject *n) { return PyObject_GetAttr(o, n); } -static CYTHON_INLINE PyObject* __Pyx_decode_c_string( +/* decode_c_string */ + static CYTHON_INLINE PyObject* __Pyx_decode_c_string( const char* cstring, Py_ssize_t start, Py_ssize_t stop, const char* encoding, const char* errors, PyObject* (*decode_func)(const char *s, Py_ssize_t size, const char *errors)) { Py_ssize_t length; if (unlikely((start < 0) | (stop < 0))) { - length = strlen(cstring); + size_t slen = strlen(cstring); + if (unlikely(slen > (size_t) PY_SSIZE_T_MAX)) { + PyErr_SetString(PyExc_OverflowError, + "c-string too long to convert to Python"); + return NULL; + } + length = (Py_ssize_t) slen; if (start < 0) { start += length; if (start < 0) @@ -21583,129 +24649,250 @@ static CYTHON_INLINE PyObject* __Pyx_decode_c_string( } } -static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb) { -#if CYTHON_COMPILING_IN_CPYTHON - PyThreadState *tstate = PyThreadState_GET(); - *type = tstate->exc_type; - *value = tstate->exc_value; - *tb = tstate->exc_traceback; - Py_XINCREF(*type); - Py_XINCREF(*value); - Py_XINCREF(*tb); -#else - PyErr_GetExcInfo(type, value, tb); -#endif -} -static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb) { -#if CYTHON_COMPILING_IN_CPYTHON +/* SwapException */ + #if CYTHON_FAST_THREAD_STATE +static CYTHON_INLINE void __Pyx__ExceptionSwap(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { PyObject *tmp_type, *tmp_value, *tmp_tb; - PyThreadState *tstate = PyThreadState_GET(); tmp_type = tstate->exc_type; tmp_value = tstate->exc_value; tmp_tb = tstate->exc_traceback; - tstate->exc_type = type; - tstate->exc_value = value; - tstate->exc_traceback = tb; - Py_XDECREF(tmp_type); - Py_XDECREF(tmp_value); - Py_XDECREF(tmp_tb); -#else - PyErr_SetExcInfo(type, value, tb); -#endif + tstate->exc_type = *type; + tstate->exc_value = *value; + tstate->exc_traceback = *tb; + *type = tmp_type; + *value = tmp_value; + *tb = tmp_tb; } - -static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) { - PyObject *local_type, *local_value, *local_tb; -#if CYTHON_COMPILING_IN_CPYTHON - PyObject *tmp_type, *tmp_value, *tmp_tb; - PyThreadState *tstate = PyThreadState_GET(); - local_type = tstate->curexc_type; - local_value = tstate->curexc_value; - local_tb = tstate->curexc_traceback; - tstate->curexc_type = 0; - tstate->curexc_value = 0; - tstate->curexc_traceback = 0; -#else - PyErr_Fetch(&local_type, &local_value, &local_tb); -#endif - PyErr_NormalizeException(&local_type, &local_value, &local_tb); -#if CYTHON_COMPILING_IN_CPYTHON - if (unlikely(tstate->curexc_type)) #else - if (unlikely(PyErr_Occurred())) +static CYTHON_INLINE void __Pyx_ExceptionSwap(PyObject **type, PyObject **value, PyObject **tb) { + PyObject *tmp_type, *tmp_value, *tmp_tb; + PyErr_GetExcInfo(&tmp_type, &tmp_value, &tmp_tb); + PyErr_SetExcInfo(*type, *value, *tb); + *type = tmp_type; + *value = tmp_value; + *tb = tmp_tb; +} #endif + +/* Import */ + static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) { + PyObject *empty_list = 0; + PyObject *module = 0; + PyObject *global_dict = 0; + PyObject *empty_dict = 0; + PyObject *list; + #if PY_VERSION_HEX < 0x03030000 + PyObject *py_import; + py_import = __Pyx_PyObject_GetAttrStr(__pyx_b, __pyx_n_s_import); + if (!py_import) goto bad; - #if PY_MAJOR_VERSION >= 3 - if (local_tb) { - if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0)) + #endif + if (from_list) + list = from_list; + else { + empty_list = PyList_New(0); + if (!empty_list) goto bad; + list = empty_list; + } + global_dict = PyModule_GetDict(__pyx_m); + if (!global_dict) + goto bad; + empty_dict = PyDict_New(); + if (!empty_dict) + goto bad; + { + #if PY_MAJOR_VERSION >= 3 + if (level == -1) { + if (strchr(__Pyx_MODULE_NAME, '.')) { + #if PY_VERSION_HEX < 0x03030000 + PyObject *py_level = PyInt_FromLong(1); + if (!py_level) + goto bad; + module = PyObject_CallFunctionObjArgs(py_import, + name, global_dict, empty_dict, list, py_level, NULL); + Py_DECREF(py_level); + #else + module = PyImport_ImportModuleLevelObject( + name, global_dict, empty_dict, list, 1); + #endif + if (!module) { + if (!PyErr_ExceptionMatches(PyExc_ImportError)) + goto bad; + PyErr_Clear(); + } + } + level = 0; + } + #endif + if (!module) { + #if PY_VERSION_HEX < 0x03030000 + PyObject *py_level = PyInt_FromLong(level); + if (!py_level) + goto bad; + module = PyObject_CallFunctionObjArgs(py_import, + name, global_dict, empty_dict, list, py_level, NULL); + Py_DECREF(py_level); + #else + module = PyImport_ImportModuleLevelObject( + name, global_dict, empty_dict, list, level); + #endif + } } - #endif - Py_XINCREF(local_tb); - Py_XINCREF(local_type); - Py_XINCREF(local_value); - *type = local_type; - *value = local_value; - *tb = local_tb; -#if CYTHON_COMPILING_IN_CPYTHON - tmp_type = tstate->exc_type; - tmp_value = tstate->exc_value; - tmp_tb = tstate->exc_traceback; - tstate->exc_type = local_type; - tstate->exc_value = local_value; - tstate->exc_traceback = local_tb; - Py_XDECREF(tmp_type); - Py_XDECREF(tmp_value); - Py_XDECREF(tmp_tb); -#else - PyErr_SetExcInfo(local_type, local_value, local_tb); -#endif - return 0; bad: - *type = 0; - *value = 0; - *tb = 0; - Py_XDECREF(local_type); - Py_XDECREF(local_value); - Py_XDECREF(local_tb); - return -1; + #if PY_VERSION_HEX < 0x03030000 + Py_XDECREF(py_import); + #endif + Py_XDECREF(empty_list); + Py_XDECREF(empty_dict); + return module; } -static CYTHON_INLINE void __Pyx_ExceptionSwap(PyObject **type, PyObject **value, PyObject **tb) { - PyObject *tmp_type, *tmp_value, *tmp_tb; -#if CYTHON_COMPILING_IN_CPYTHON - PyThreadState *tstate = PyThreadState_GET(); - tmp_type = tstate->exc_type; - tmp_value = tstate->exc_value; - tmp_tb = tstate->exc_traceback; - tstate->exc_type = *type; - tstate->exc_value = *value; - tstate->exc_traceback = *tb; -#else - PyErr_GetExcInfo(&tmp_type, &tmp_value, &tmp_tb); - PyErr_SetExcInfo(*type, *value, *tb); +/* PyIntBinop */ + #if !CYTHON_COMPILING_IN_PYPY +static PyObject* __Pyx_PyInt_AddObjC(PyObject *op1, PyObject *op2, CYTHON_UNUSED long intval, CYTHON_UNUSED int inplace) { + #if PY_MAJOR_VERSION < 3 + if (likely(PyInt_CheckExact(op1))) { + const long b = intval; + long x; + long a = PyInt_AS_LONG(op1); + x = (long)((unsigned long)a + b); + if (likely((x^a) >= 0 || (x^b) >= 0)) + return PyInt_FromLong(x); + return PyLong_Type.tp_as_number->nb_add(op1, op2); + } + #endif + #if CYTHON_USE_PYLONG_INTERNALS + if (likely(PyLong_CheckExact(op1))) { + const long b = intval; + long a, x; +#ifdef HAVE_LONG_LONG + const PY_LONG_LONG llb = intval; + PY_LONG_LONG lla, llx; #endif - *type = tmp_type; - *value = tmp_value; - *tb = tmp_tb; + const digit* digits = ((PyLongObject*)op1)->ob_digit; + const Py_ssize_t size = Py_SIZE(op1); + if (likely(__Pyx_sst_abs(size) <= 1)) { + a = likely(size) ? digits[0] : 0; + if (size == -1) a = -a; + } else { + switch (size) { + case -2: + if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { + a = -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); + break; +#ifdef HAVE_LONG_LONG + } else if (8 * sizeof(PY_LONG_LONG) - 1 > 2 * PyLong_SHIFT) { + lla = -(PY_LONG_LONG) (((((unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); + goto long_long; +#endif + } + case 2: + if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { + a = (long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); + break; +#ifdef HAVE_LONG_LONG + } else if (8 * sizeof(PY_LONG_LONG) - 1 > 2 * PyLong_SHIFT) { + lla = (PY_LONG_LONG) (((((unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); + goto long_long; +#endif + } + case -3: + if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { + a = -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); + break; +#ifdef HAVE_LONG_LONG + } else if (8 * sizeof(PY_LONG_LONG) - 1 > 3 * PyLong_SHIFT) { + lla = -(PY_LONG_LONG) (((((((unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); + goto long_long; +#endif + } + case 3: + if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { + a = (long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); + break; +#ifdef HAVE_LONG_LONG + } else if (8 * sizeof(PY_LONG_LONG) - 1 > 3 * PyLong_SHIFT) { + lla = (PY_LONG_LONG) (((((((unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); + goto long_long; +#endif + } + case -4: + if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { + a = -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); + break; +#ifdef HAVE_LONG_LONG + } else if (8 * sizeof(PY_LONG_LONG) - 1 > 4 * PyLong_SHIFT) { + lla = -(PY_LONG_LONG) (((((((((unsigned PY_LONG_LONG)digits[3]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); + goto long_long; +#endif + } + case 4: + if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { + a = (long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); + break; +#ifdef HAVE_LONG_LONG + } else if (8 * sizeof(PY_LONG_LONG) - 1 > 4 * PyLong_SHIFT) { + lla = (PY_LONG_LONG) (((((((((unsigned PY_LONG_LONG)digits[3]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); + goto long_long; +#endif + } + default: return PyLong_Type.tp_as_number->nb_add(op1, op2); + } + } + x = a + b; + return PyLong_FromLong(x); +#ifdef HAVE_LONG_LONG + long_long: + llx = lla + llb; + return PyLong_FromLongLong(llx); +#endif + + + } + #endif + if (PyFloat_CheckExact(op1)) { + const long b = intval; + double a = PyFloat_AS_DOUBLE(op1); + double result; + PyFPE_START_PROTECT("add", return NULL) + result = ((double)a) + (double)b; + PyFPE_END_PROTECT(result) + return PyFloat_FromDouble(result); + } + return (inplace ? PyNumber_InPlaceAdd : PyNumber_Add)(op1, op2); } +#endif -static CYTHON_INLINE void __Pyx_RaiseUnboundLocalError(const char *varname) { +/* None */ + static CYTHON_INLINE void __Pyx_RaiseUnboundLocalError(const char *varname) { PyErr_Format(PyExc_UnboundLocalError, "local variable '%s' referenced before assignment", varname); } -static CYTHON_INLINE long __Pyx_div_long(long a, long b) { +/* None */ + static CYTHON_INLINE long __Pyx_div_long(long a, long b) { long q = a / b; long r = a - q*b; q -= ((r != 0) & ((r ^ b) < 0)); return q; } -static void __Pyx_WriteUnraisable(const char *name, CYTHON_UNUSED int clineno, +/* WriteUnraisableException */ + static void __Pyx_WriteUnraisable(const char *name, CYTHON_UNUSED int clineno, CYTHON_UNUSED int lineno, CYTHON_UNUSED const char *filename, - int full_traceback) { + int full_traceback, CYTHON_UNUSED int nogil) { PyObject *old_exc, *old_val, *old_tb; PyObject *ctx; + __Pyx_PyThreadState_declare +#ifdef WITH_THREAD + PyGILState_STATE state; + if (nogil) + state = PyGILState_Ensure(); +#ifdef _MSC_VER + else state = (PyGILState_STATE)-1; +#endif +#endif + __Pyx_PyThreadState_assign __Pyx_ErrFetch(&old_exc, &old_val, &old_tb); if (full_traceback) { Py_XINCREF(old_exc); @@ -21726,9 +24913,14 @@ static void __Pyx_WriteUnraisable(const char *name, CYTHON_UNUSED int clineno, PyErr_WriteUnraisable(ctx); Py_DECREF(ctx); } +#ifdef WITH_THREAD + if (nogil) + PyGILState_Release(state); +#endif } -static int __Pyx_SetVtable(PyObject *dict, void *vtable) { +/* SetVTable */ + static int __Pyx_SetVtable(PyObject *dict, void *vtable) { #if PY_VERSION_HEX >= 0x02070000 PyObject *ob = PyCapsule_New(vtable, 0, 0); #else @@ -21745,13 +24937,14 @@ bad: return -1; } -static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) { +/* CodeObjectCache */ + static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) { int start = 0, mid = 0, end = count - 1; if (end >= 0 && code_line > entries[end].code_line) { return count; } while (start < end) { - mid = (start + end) / 2; + mid = start + (end - start) / 2; if (code_line < entries[mid].code_line) { end = mid; } else if (code_line > entries[mid].code_line) { @@ -21824,7 +25017,8 @@ static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) { Py_INCREF(code_object); } -#include "compile.h" +/* AddTraceback */ + #include "compile.h" #include "frameobject.h" #include "traceback.h" static PyCodeObject* __Pyx_CreateCodeObjectForTraceback( @@ -21897,7 +25091,7 @@ static void __Pyx_AddTraceback(const char *funcname, int c_line, 0 /*PyObject *locals*/ ); if (!py_frame) goto bad; - py_frame->f_lineno = py_line; + __Pyx_PyFrame_SetLineNumber(py_frame, py_line); PyTraceBack_Here(py_frame); bad: Py_XDECREF(py_code); @@ -21927,80 +25121,102 @@ static void __Pyx_ReleaseBuffer(Py_buffer *view) { #endif - static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) { - PyObject *empty_list = 0; - PyObject *module = 0; - PyObject *global_dict = 0; - PyObject *empty_dict = 0; - PyObject *list; - #if PY_VERSION_HEX < 0x03030000 - PyObject *py_import; - py_import = __Pyx_PyObject_GetAttrStr(__pyx_b, __pyx_n_s_import); - if (!py_import) - goto bad; - #endif - if (from_list) - list = from_list; - else { - empty_list = PyList_New(0); - if (!empty_list) - goto bad; - list = empty_list; + /* MemviewSliceIsContig */ + static int +__pyx_memviewslice_is_contig(const __Pyx_memviewslice mvs, + char order, int ndim) +{ + int i, index, step, start; + Py_ssize_t itemsize = mvs.memview->view.itemsize; + if (order == 'F') { + step = 1; + start = 0; + } else { + step = -1; + start = ndim - 1; } - global_dict = PyModule_GetDict(__pyx_m); - if (!global_dict) - goto bad; - empty_dict = PyDict_New(); - if (!empty_dict) - goto bad; - { - #if PY_MAJOR_VERSION >= 3 - if (level == -1) { - if (strchr(__Pyx_MODULE_NAME, '.')) { - #if PY_VERSION_HEX < 0x03030000 - PyObject *py_level = PyInt_FromLong(1); - if (!py_level) - goto bad; - module = PyObject_CallFunctionObjArgs(py_import, - name, global_dict, empty_dict, list, py_level, NULL); - Py_DECREF(py_level); - #else - module = PyImport_ImportModuleLevelObject( - name, global_dict, empty_dict, list, 1); - #endif - if (!module) { - if (!PyErr_ExceptionMatches(PyExc_ImportError)) - goto bad; - PyErr_Clear(); - } - } - level = 0; - } - #endif - if (!module) { - #if PY_VERSION_HEX < 0x03030000 - PyObject *py_level = PyInt_FromLong(level); - if (!py_level) - goto bad; - module = PyObject_CallFunctionObjArgs(py_import, - name, global_dict, empty_dict, list, py_level, NULL); - Py_DECREF(py_level); - #else - module = PyImport_ImportModuleLevelObject( - name, global_dict, empty_dict, list, level); - #endif - } + for (i = 0; i < ndim; i++) { + index = start + step * i; + if (mvs.suboffsets[index] >= 0 || mvs.strides[index] != itemsize) + return 0; + itemsize *= mvs.shape[index]; } -bad: - #if PY_VERSION_HEX < 0x03030000 - Py_XDECREF(py_import); - #endif - Py_XDECREF(empty_list); - Py_XDECREF(empty_dict); - return module; + return 1; } +/* OverlappingSlices */ + static void +__pyx_get_array_memory_extents(__Pyx_memviewslice *slice, + void **out_start, void **out_end, + int ndim, size_t itemsize) +{ + char *start, *end; + int i; + start = end = slice->data; + for (i = 0; i < ndim; i++) { + Py_ssize_t stride = slice->strides[i]; + Py_ssize_t extent = slice->shape[i]; + if (extent == 0) { + *out_start = *out_end = start; + return; + } else { + if (stride > 0) + end += stride * (extent - 1); + else + start += stride * (extent - 1); + } + } + *out_start = start; + *out_end = end + itemsize; +} static int +__pyx_slices_overlap(__Pyx_memviewslice *slice1, + __Pyx_memviewslice *slice2, + int ndim, size_t itemsize) +{ + void *start1, *end1, *start2, *end2; + __pyx_get_array_memory_extents(slice1, &start1, &end1, ndim, itemsize); + __pyx_get_array_memory_extents(slice2, &start2, &end2, ndim, itemsize); + return (start1 < end2) && (start2 < end1); +} + +/* Capsule */ + static CYTHON_INLINE PyObject * +__pyx_capsule_create(void *p, CYTHON_UNUSED const char *sig) +{ + PyObject *cobj; +#if PY_VERSION_HEX >= 0x02070000 + cobj = PyCapsule_New(p, sig, NULL); +#else + cobj = PyCObject_FromVoidPtr(p, NULL); +#endif + return cobj; +} + +/* CIntFromPyVerify */ + #define __PYX_VERIFY_RETURN_INT(target_type, func_type, func_value)\ + __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 0) +#define __PYX_VERIFY_RETURN_INT_EXC(target_type, func_type, func_value)\ + __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 1) +#define __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, exc)\ + {\ + func_type value = func_value;\ + if (sizeof(target_type) < sizeof(func_type)) {\ + if (unlikely(value != (func_type) (target_type) value)) {\ + func_type zero = 0;\ + if (exc && unlikely(value == (func_type)-1 && PyErr_Occurred()))\ + return (target_type) -1;\ + if (is_unsigned && unlikely(value < zero))\ + goto raise_neg_overflow;\ + else\ + goto raise_overflow;\ + }\ + }\ + return (target_type) value;\ + } + +/* TypeInfoCompare */ + static int __pyx_typeinfo_cmp(__Pyx_TypeInfo *a, __Pyx_TypeInfo *b) { int i; @@ -22040,7 +25256,8 @@ __pyx_typeinfo_cmp(__Pyx_TypeInfo *a, __Pyx_TypeInfo *b) return 1; } -static int +/* MemviewSliceValidateAndInit */ + static int __pyx_check_strides(Py_buffer *buf, int dim, int ndim, int spec) { if (buf->shape[dim] <= 1) @@ -22221,7 +25438,8 @@ no_fail: return retval; } -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_float(PyObject *obj) { +/* ObjectToMemviewSlice */ + static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_float(PyObject *obj) { __Pyx_memviewslice result = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_BufFmt_StackElem stack[1]; int axes_specs[] = { (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_FOLLOW), (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_CONTIG) }; @@ -22243,7 +25461,8 @@ __pyx_fail: return result; } -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_dc_nn___pyx_t_5numpy_int32_t(PyObject *obj) { +/* ObjectToMemviewSlice */ + static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_dc_nn___pyx_t_5numpy_int32_t(PyObject *obj) { __Pyx_memviewslice result = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_BufFmt_StackElem stack[1]; int axes_specs[] = { (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_CONTIG) }; @@ -22265,7 +25484,8 @@ __pyx_fail: return result; } -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_double(PyObject *obj) { +/* ObjectToMemviewSlice */ + static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_double(PyObject *obj) { __Pyx_memviewslice result = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_BufFmt_StackElem stack[1]; int axes_specs[] = { (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_FOLLOW), (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_CONTIG) }; @@ -22287,7 +25507,8 @@ __pyx_fail: return result; } -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_int64_t(PyObject *obj) { +/* ObjectToMemviewSlice */ + static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_int64_t(PyObject *obj) { __Pyx_memviewslice result = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_BufFmt_StackElem stack[1]; int axes_specs[] = { (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_FOLLOW), (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_CONTIG) }; @@ -22309,7 +25530,8 @@ __pyx_fail: return result; } -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_uint64_t(PyObject *obj) { +/* ObjectToMemviewSlice */ + static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_uint64_t(PyObject *obj) { __Pyx_memviewslice result = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_BufFmt_StackElem stack[1]; int axes_specs[] = { (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_FOLLOW), (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_CONTIG) }; @@ -22331,7 +25553,8 @@ __pyx_fail: return result; } -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_int32_t(PyObject *obj) { +/* ObjectToMemviewSlice */ + static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_int32_t(PyObject *obj) { __Pyx_memviewslice result = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_BufFmt_StackElem stack[1]; int axes_specs[] = { (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_FOLLOW), (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_CONTIG) }; @@ -22353,7 +25576,8 @@ __pyx_fail: return result; } -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_uint32_t(PyObject *obj) { +/* ObjectToMemviewSlice */ + static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_uint32_t(PyObject *obj) { __Pyx_memviewslice result = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_BufFmt_StackElem stack[1]; int axes_specs[] = { (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_FOLLOW), (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_CONTIG) }; @@ -22375,7 +25599,8 @@ __pyx_fail: return result; } -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_int16_t(PyObject *obj) { +/* ObjectToMemviewSlice */ + static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_nn___pyx_t_5numpy_int16_t(PyObject *obj) { __Pyx_memviewslice result = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_BufFmt_StackElem stack[1]; int axes_specs[] = { (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_FOLLOW), (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_CONTIG) }; @@ -22397,22 +25622,27 @@ __pyx_fail: return result; } -static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { - const long neg_one = (long) -1, const_zero = 0; +/* CIntToPy */ + static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { + const long neg_one = (long) -1, const_zero = (long) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(long) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(long) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); - } else if (sizeof(long) <= sizeof(unsigned long long)) { - return PyLong_FromUnsignedLongLong((unsigned long long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) { + return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); +#endif } } else { if (sizeof(long) <= sizeof(long)) { return PyInt_FromLong((long) value); - } else if (sizeof(long) <= sizeof(long long)) { - return PyLong_FromLongLong((long long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(long) <= sizeof(PY_LONG_LONG)) { + return PyLong_FromLongLong((PY_LONG_LONG) value); +#endif } } { @@ -22423,7 +25653,39 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { } } -#if CYTHON_CCOMPLEX +/* CIntToPy */ + static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { + const int neg_one = (int) -1, const_zero = (int) 0; + const int is_unsigned = neg_one > const_zero; + if (is_unsigned) { + if (sizeof(int) < sizeof(long)) { + return PyInt_FromLong((long) value); + } else if (sizeof(int) <= sizeof(unsigned long)) { + return PyLong_FromUnsignedLong((unsigned long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { + return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); +#endif + } + } else { + if (sizeof(int) <= sizeof(long)) { + return PyInt_FromLong((long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { + return PyLong_FromLongLong((PY_LONG_LONG) value); +#endif + } + } + { + int one = 1; int little = (int)*(unsigned char *)&one; + unsigned char *bytes = (unsigned char *)&value; + return _PyLong_FromByteArray(bytes, sizeof(int), + little, !is_unsigned); + } +} + +/* Declarations */ + #if CYTHON_CCOMPLEX #ifdef __cplusplus static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { return ::std::complex< float >(x, y); @@ -22442,60 +25704,86 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { } #endif -#if CYTHON_CCOMPLEX +/* Arithmetic */ + #if CYTHON_CCOMPLEX #else - static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex a, __pyx_t_float_complex b) { + static CYTHON_INLINE int __Pyx_c_eq_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { return (a.real == b.real) && (a.imag == b.imag); } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex a, __pyx_t_float_complex b) { + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sum_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { __pyx_t_float_complex z; z.real = a.real + b.real; z.imag = a.imag + b.imag; return z; } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex a, __pyx_t_float_complex b) { + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_diff_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { __pyx_t_float_complex z; z.real = a.real - b.real; z.imag = a.imag - b.imag; return z; } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prodf(__pyx_t_float_complex a, __pyx_t_float_complex b) { + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prod_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { __pyx_t_float_complex z; z.real = a.real * b.real - a.imag * b.imag; z.imag = a.real * b.imag + a.imag * b.real; return z; } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex a, __pyx_t_float_complex b) { - __pyx_t_float_complex z; - float denom = b.real * b.real + b.imag * b.imag; - z.real = (a.real * b.real + a.imag * b.imag) / denom; - z.imag = (a.imag * b.real - a.real * b.imag) / denom; - return z; + #if 1 + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + if (b.imag == 0) { + return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.real); + } else if (fabsf(b.real) >= fabsf(b.imag)) { + if (b.real == 0 && b.imag == 0) { + return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.imag); + } else { + float r = b.imag / b.real; + float s = 1.0 / (b.real + b.imag * r); + return __pyx_t_float_complex_from_parts( + (a.real + a.imag * r) * s, (a.imag - a.real * r) * s); + } + } else { + float r = b.real / b.imag; + float s = 1.0 / (b.imag + b.real * r); + return __pyx_t_float_complex_from_parts( + (a.real * r + a.imag) * s, (a.imag * r - a.real) * s); + } + } + #else + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + if (b.imag == 0) { + return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.real); + } else { + float denom = b.real * b.real + b.imag * b.imag; + return __pyx_t_float_complex_from_parts( + (a.real * b.real + a.imag * b.imag) / denom, + (a.imag * b.real - a.real * b.imag) / denom); + } } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex a) { + #endif + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_neg_float(__pyx_t_float_complex a) { __pyx_t_float_complex z; z.real = -a.real; z.imag = -a.imag; return z; } - static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex a) { + static CYTHON_INLINE int __Pyx_c_is_zero_float(__pyx_t_float_complex a) { return (a.real == 0) && (a.imag == 0); } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex a) { + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conj_float(__pyx_t_float_complex a) { __pyx_t_float_complex z; z.real = a.real; z.imag = -a.imag; return z; } #if 1 - static CYTHON_INLINE float __Pyx_c_absf(__pyx_t_float_complex z) { + static CYTHON_INLINE float __Pyx_c_abs_float(__pyx_t_float_complex z) { #if !defined(HAVE_HYPOT) || defined(_MSC_VER) return sqrtf(z.real*z.real + z.imag*z.imag); #else return hypotf(z.real, z.imag); #endif } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex a, __pyx_t_float_complex b) { + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_pow_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { __pyx_t_float_complex z; float r, lnr, theta, z_r, z_theta; if (b.imag == 0 && b.real == (int)b.real) { @@ -22513,24 +25801,32 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { case 1: return a; case 2: - z = __Pyx_c_prodf(a, a); - return __Pyx_c_prodf(a, a); + z = __Pyx_c_prod_float(a, a); + return __Pyx_c_prod_float(a, a); case 3: - z = __Pyx_c_prodf(a, a); - return __Pyx_c_prodf(z, a); + z = __Pyx_c_prod_float(a, a); + return __Pyx_c_prod_float(z, a); case 4: - z = __Pyx_c_prodf(a, a); - return __Pyx_c_prodf(z, z); + z = __Pyx_c_prod_float(a, a); + return __Pyx_c_prod_float(z, z); } } if (a.imag == 0) { if (a.real == 0) { return a; + } else if (b.imag == 0) { + z.real = powf(a.real, b.real); + z.imag = 0; + return z; + } else if (a.real > 0) { + r = a.real; + theta = 0; + } else { + r = -a.real; + theta = atan2f(0, -1); } - r = a.real; - theta = 0; } else { - r = __Pyx_c_absf(a); + r = __Pyx_c_abs_float(a); theta = atan2f(a.imag, a.real); } lnr = logf(r); @@ -22543,7 +25839,8 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { #endif #endif -#if CYTHON_CCOMPLEX +/* Declarations */ + #if CYTHON_CCOMPLEX #ifdef __cplusplus static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { return ::std::complex< double >(x, y); @@ -22562,60 +25859,86 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { } #endif -#if CYTHON_CCOMPLEX +/* Arithmetic */ + #if CYTHON_CCOMPLEX #else - static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex a, __pyx_t_double_complex b) { + static CYTHON_INLINE int __Pyx_c_eq_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { return (a.real == b.real) && (a.imag == b.imag); } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex a, __pyx_t_double_complex b) { + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { __pyx_t_double_complex z; z.real = a.real + b.real; z.imag = a.imag + b.imag; return z; } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex a, __pyx_t_double_complex b) { + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { __pyx_t_double_complex z; z.real = a.real - b.real; z.imag = a.imag - b.imag; return z; } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod(__pyx_t_double_complex a, __pyx_t_double_complex b) { + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { __pyx_t_double_complex z; z.real = a.real * b.real - a.imag * b.imag; z.imag = a.real * b.imag + a.imag * b.real; return z; } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex a, __pyx_t_double_complex b) { - __pyx_t_double_complex z; - double denom = b.real * b.real + b.imag * b.imag; - z.real = (a.real * b.real + a.imag * b.imag) / denom; - z.imag = (a.imag * b.real - a.real * b.imag) / denom; - return z; + #if 1 + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + if (b.imag == 0) { + return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.real); + } else if (fabs(b.real) >= fabs(b.imag)) { + if (b.real == 0 && b.imag == 0) { + return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.imag); + } else { + double r = b.imag / b.real; + double s = 1.0 / (b.real + b.imag * r); + return __pyx_t_double_complex_from_parts( + (a.real + a.imag * r) * s, (a.imag - a.real * r) * s); + } + } else { + double r = b.real / b.imag; + double s = 1.0 / (b.imag + b.real * r); + return __pyx_t_double_complex_from_parts( + (a.real * r + a.imag) * s, (a.imag * r - a.real) * s); + } } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex a) { + #else + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + if (b.imag == 0) { + return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.real); + } else { + double denom = b.real * b.real + b.imag * b.imag; + return __pyx_t_double_complex_from_parts( + (a.real * b.real + a.imag * b.imag) / denom, + (a.imag * b.real - a.real * b.imag) / denom); + } + } + #endif + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg_double(__pyx_t_double_complex a) { __pyx_t_double_complex z; z.real = -a.real; z.imag = -a.imag; return z; } - static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex a) { + static CYTHON_INLINE int __Pyx_c_is_zero_double(__pyx_t_double_complex a) { return (a.real == 0) && (a.imag == 0); } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex a) { + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj_double(__pyx_t_double_complex a) { __pyx_t_double_complex z; z.real = a.real; z.imag = -a.imag; return z; } #if 1 - static CYTHON_INLINE double __Pyx_c_abs(__pyx_t_double_complex z) { + static CYTHON_INLINE double __Pyx_c_abs_double(__pyx_t_double_complex z) { #if !defined(HAVE_HYPOT) || defined(_MSC_VER) return sqrt(z.real*z.real + z.imag*z.imag); #else return hypot(z.real, z.imag); #endif } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex a, __pyx_t_double_complex b) { + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { __pyx_t_double_complex z; double r, lnr, theta, z_r, z_theta; if (b.imag == 0 && b.real == (int)b.real) { @@ -22633,24 +25956,32 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { case 1: return a; case 2: - z = __Pyx_c_prod(a, a); - return __Pyx_c_prod(a, a); + z = __Pyx_c_prod_double(a, a); + return __Pyx_c_prod_double(a, a); case 3: - z = __Pyx_c_prod(a, a); - return __Pyx_c_prod(z, a); + z = __Pyx_c_prod_double(a, a); + return __Pyx_c_prod_double(z, a); case 4: - z = __Pyx_c_prod(a, a); - return __Pyx_c_prod(z, z); + z = __Pyx_c_prod_double(a, a); + return __Pyx_c_prod_double(z, z); } } if (a.imag == 0) { if (a.real == 0) { return a; + } else if (b.imag == 0) { + z.real = pow(a.real, b.real); + z.imag = 0; + return z; + } else if (a.real > 0) { + r = a.real; + theta = 0; + } else { + r = -a.real; + theta = atan2(0, -1); } - r = a.real; - theta = 0; } else { - r = __Pyx_c_abs(a); + r = __Pyx_c_abs_double(a); theta = atan2(a.imag, a.real); } lnr = log(r); @@ -22663,55 +25994,107 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { #endif #endif -static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { - const int neg_one = (int) -1, const_zero = 0; +/* CIntToPy */ + static CYTHON_INLINE PyObject* __Pyx_PyInt_From_enum__NPY_TYPES(enum NPY_TYPES value) { + const enum NPY_TYPES neg_one = (enum NPY_TYPES) -1, const_zero = (enum NPY_TYPES) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { - if (sizeof(int) < sizeof(long)) { + if (sizeof(enum NPY_TYPES) < sizeof(long)) { return PyInt_FromLong((long) value); - } else if (sizeof(int) <= sizeof(unsigned long)) { + } else if (sizeof(enum NPY_TYPES) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); - } else if (sizeof(int) <= sizeof(unsigned long long)) { - return PyLong_FromUnsignedLongLong((unsigned long long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(enum NPY_TYPES) <= sizeof(unsigned PY_LONG_LONG)) { + return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); +#endif } } else { - if (sizeof(int) <= sizeof(long)) { + if (sizeof(enum NPY_TYPES) <= sizeof(long)) { return PyInt_FromLong((long) value); - } else if (sizeof(int) <= sizeof(long long)) { - return PyLong_FromLongLong((long long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(enum NPY_TYPES) <= sizeof(PY_LONG_LONG)) { + return PyLong_FromLongLong((PY_LONG_LONG) value); +#endif } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; - return _PyLong_FromByteArray(bytes, sizeof(int), + return _PyLong_FromByteArray(bytes, sizeof(enum NPY_TYPES), little, !is_unsigned); } } -#define __PYX_VERIFY_RETURN_INT(target_type, func_type, func_value) \ - { \ - func_type value = func_value; \ - if (sizeof(target_type) < sizeof(func_type)) { \ - if (unlikely(value != (func_type) (target_type) value)) { \ - func_type zero = 0; \ - if (is_unsigned && unlikely(value < zero)) \ - goto raise_neg_overflow; \ - else \ - goto raise_overflow; \ - } \ - } \ - return (target_type) value; \ +/* MemviewSliceCopyTemplate */ + static __Pyx_memviewslice +__pyx_memoryview_copy_new_contig(const __Pyx_memviewslice *from_mvs, + const char *mode, int ndim, + size_t sizeof_dtype, int contig_flag, + int dtype_is_object) +{ + __Pyx_RefNannyDeclarations + int i; + __Pyx_memviewslice new_mvs = { 0, 0, { 0 }, { 0 }, { 0 } }; + struct __pyx_memoryview_obj *from_memview = from_mvs->memview; + Py_buffer *buf = &from_memview->view; + PyObject *shape_tuple = NULL; + PyObject *temp_int = NULL; + struct __pyx_array_obj *array_obj = NULL; + struct __pyx_memoryview_obj *memview_obj = NULL; + __Pyx_RefNannySetupContext("__pyx_memoryview_copy_new_contig", 0); + for (i = 0; i < ndim; i++) { + if (from_mvs->suboffsets[i] >= 0) { + PyErr_Format(PyExc_ValueError, "Cannot copy memoryview slice with " + "indirect dimensions (axis %d)", i); + goto fail; + } } + shape_tuple = PyTuple_New(ndim); + if (unlikely(!shape_tuple)) { + goto fail; + } + __Pyx_GOTREF(shape_tuple); + for(i = 0; i < ndim; i++) { + temp_int = PyInt_FromSsize_t(from_mvs->shape[i]); + if(unlikely(!temp_int)) { + goto fail; + } else { + PyTuple_SET_ITEM(shape_tuple, i, temp_int); + temp_int = NULL; + } + } + array_obj = __pyx_array_new(shape_tuple, sizeof_dtype, buf->format, (char *) mode, NULL); + if (unlikely(!array_obj)) { + goto fail; + } + __Pyx_GOTREF(array_obj); + memview_obj = (struct __pyx_memoryview_obj *) __pyx_memoryview_new( + (PyObject *) array_obj, contig_flag, + dtype_is_object, + from_mvs->memview->typeinfo); + if (unlikely(!memview_obj)) + goto fail; + if (unlikely(__Pyx_init_memviewslice(memview_obj, ndim, &new_mvs, 1) < 0)) + goto fail; + if (unlikely(__pyx_memoryview_copy_contents(*from_mvs, new_mvs, ndim, ndim, + dtype_is_object) < 0)) + goto fail; + goto no_fail; +fail: + __Pyx_XDECREF(new_mvs.memview); + new_mvs.memview = NULL; + new_mvs.data = NULL; +no_fail: + __Pyx_XDECREF(shape_tuple); + __Pyx_XDECREF(temp_int); + __Pyx_XDECREF(array_obj); + __Pyx_RefNannyFinishContext(); + return new_mvs; +} -#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS - #include "longintrepr.h" - #endif -#endif - -static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { - const int neg_one = (int) -1, const_zero = 0; +/* CIntFromPy */ + static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { + const int neg_one = (int) -1, const_zero = (int) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { @@ -22728,36 +26111,129 @@ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { -#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS +#if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { - case 0: return 0; - case 1: __PYX_VERIFY_RETURN_INT(int, digit, ((PyLongObject*)x)->ob_digit[0]); + case 0: return (int) 0; + case 1: __PYX_VERIFY_RETURN_INT(int, digit, digits[0]) + case 2: + if (8 * sizeof(int) > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) >= 2 * PyLong_SHIFT) { + return (int) (((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); + } + } + break; + case 3: + if (8 * sizeof(int) > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) >= 3 * PyLong_SHIFT) { + return (int) (((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); + } + } + break; + case 4: + if (8 * sizeof(int) > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) >= 4 * PyLong_SHIFT) { + return (int) (((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); + } + } + break; } - #endif #endif +#if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } +#else + { + int result = PyObject_RichCompareBool(x, Py_False, Py_LT); + if (unlikely(result < 0)) + return (int) -1; + if (unlikely(result == 1)) + goto raise_neg_overflow; + } +#endif if (sizeof(int) <= sizeof(unsigned long)) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, PyLong_AsUnsignedLong(x)) - } else if (sizeof(int) <= sizeof(unsigned long long)) { - __PYX_VERIFY_RETURN_INT(int, unsigned long long, PyLong_AsUnsignedLongLong(x)) + __PYX_VERIFY_RETURN_INT_EXC(int, unsigned long, PyLong_AsUnsignedLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(int, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) +#endif } } else { -#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS +#if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { - case 0: return 0; - case 1: __PYX_VERIFY_RETURN_INT(int, digit, +(((PyLongObject*)x)->ob_digit[0])); - case -1: __PYX_VERIFY_RETURN_INT(int, sdigit, -(sdigit) ((PyLongObject*)x)->ob_digit[0]); + case 0: return (int) 0; + case -1: __PYX_VERIFY_RETURN_INT(int, sdigit, (sdigit) (-(sdigit)digits[0])) + case 1: __PYX_VERIFY_RETURN_INT(int, digit, +digits[0]) + case -2: + if (8 * sizeof(int) - 1 > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { + return (int) (((int)-1)*(((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); + } + } + break; + case 2: + if (8 * sizeof(int) > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { + return (int) ((((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); + } + } + break; + case -3: + if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { + return (int) (((int)-1)*(((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); + } + } + break; + case 3: + if (8 * sizeof(int) > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { + return (int) ((((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); + } + } + break; + case -4: + if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) { + return (int) (((int)-1)*(((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); + } + } + break; + case 4: + if (8 * sizeof(int) > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) { + return (int) ((((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); + } + } + break; } - #endif #endif if (sizeof(int) <= sizeof(long)) { - __PYX_VERIFY_RETURN_INT(int, long, PyLong_AsLong(x)) - } else if (sizeof(int) <= sizeof(long long)) { - __PYX_VERIFY_RETURN_INT(int, long long, PyLong_AsLongLong(x)) + __PYX_VERIFY_RETURN_INT_EXC(int, long, PyLong_AsLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(int, PY_LONG_LONG, PyLong_AsLongLong(x)) +#endif } } { @@ -22766,7 +26242,7 @@ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else int val; - PyObject *v = __Pyx_PyNumber_Int(x); + PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; @@ -22789,7 +26265,7 @@ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { } } else { int val; - PyObject *tmp = __Pyx_PyNumber_Int(x); + PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (int) -1; val = __Pyx_PyInt_As_int(tmp); Py_DECREF(tmp); @@ -22805,143 +26281,9 @@ raise_neg_overflow: return (int) -1; } -static int -__pyx_memviewslice_is_contig(const __Pyx_memviewslice *mvs, - char order, int ndim) -{ - int i, index, step, start; - Py_ssize_t itemsize = mvs->memview->view.itemsize; - if (order == 'F') { - step = 1; - start = 0; - } else { - step = -1; - start = ndim - 1; - } - for (i = 0; i < ndim; i++) { - index = start + step * i; - if (mvs->suboffsets[index] >= 0 || mvs->strides[index] != itemsize) - return 0; - itemsize *= mvs->shape[index]; - } - return 1; -} - -static void -__pyx_get_array_memory_extents(__Pyx_memviewslice *slice, - void **out_start, void **out_end, - int ndim, size_t itemsize) -{ - char *start, *end; - int i; - start = end = slice->data; - for (i = 0; i < ndim; i++) { - Py_ssize_t stride = slice->strides[i]; - Py_ssize_t extent = slice->shape[i]; - if (extent == 0) { - *out_start = *out_end = start; - return; - } else { - if (stride > 0) - end += stride * (extent - 1); - else - start += stride * (extent - 1); - } - } - *out_start = start; - *out_end = end + itemsize; -} -static int -__pyx_slices_overlap(__Pyx_memviewslice *slice1, - __Pyx_memviewslice *slice2, - int ndim, size_t itemsize) -{ - void *start1, *end1, *start2, *end2; - __pyx_get_array_memory_extents(slice1, &start1, &end1, ndim, itemsize); - __pyx_get_array_memory_extents(slice2, &start2, &end2, ndim, itemsize); - return (start1 < end2) && (start2 < end1); -} - -static __Pyx_memviewslice -__pyx_memoryview_copy_new_contig(const __Pyx_memviewslice *from_mvs, - const char *mode, int ndim, - size_t sizeof_dtype, int contig_flag, - int dtype_is_object) -{ - __Pyx_RefNannyDeclarations - int i; - __Pyx_memviewslice new_mvs = { 0, 0, { 0 }, { 0 }, { 0 } }; - struct __pyx_memoryview_obj *from_memview = from_mvs->memview; - Py_buffer *buf = &from_memview->view; - PyObject *shape_tuple = NULL; - PyObject *temp_int = NULL; - struct __pyx_array_obj *array_obj = NULL; - struct __pyx_memoryview_obj *memview_obj = NULL; - __Pyx_RefNannySetupContext("__pyx_memoryview_copy_new_contig", 0); - for (i = 0; i < ndim; i++) { - if (from_mvs->suboffsets[i] >= 0) { - PyErr_Format(PyExc_ValueError, "Cannot copy memoryview slice with " - "indirect dimensions (axis %d)", i); - goto fail; - } - } - shape_tuple = PyTuple_New(ndim); - if (unlikely(!shape_tuple)) { - goto fail; - } - __Pyx_GOTREF(shape_tuple); - for(i = 0; i < ndim; i++) { - temp_int = PyInt_FromSsize_t(from_mvs->shape[i]); - if(unlikely(!temp_int)) { - goto fail; - } else { - PyTuple_SET_ITEM(shape_tuple, i, temp_int); - temp_int = NULL; - } - } - array_obj = __pyx_array_new(shape_tuple, sizeof_dtype, buf->format, (char *) mode, NULL); - if (unlikely(!array_obj)) { - goto fail; - } - __Pyx_GOTREF(array_obj); - memview_obj = (struct __pyx_memoryview_obj *) __pyx_memoryview_new( - (PyObject *) array_obj, contig_flag, - dtype_is_object, - from_mvs->memview->typeinfo); - if (unlikely(!memview_obj)) - goto fail; - if (unlikely(__Pyx_init_memviewslice(memview_obj, ndim, &new_mvs, 1) < 0)) - goto fail; - if (unlikely(__pyx_memoryview_copy_contents(*from_mvs, new_mvs, ndim, ndim, - dtype_is_object) < 0)) - goto fail; - goto no_fail; -fail: - __Pyx_XDECREF(new_mvs.memview); - new_mvs.memview = NULL; - new_mvs.data = NULL; -no_fail: - __Pyx_XDECREF(shape_tuple); - __Pyx_XDECREF(temp_int); - __Pyx_XDECREF(array_obj); - __Pyx_RefNannyFinishContext(); - return new_mvs; -} - -static CYTHON_INLINE PyObject * -__pyx_capsule_create(void *p, CYTHON_UNUSED const char *sig) -{ - PyObject *cobj; -#if PY_VERSION_HEX >= 0x02070000 - cobj = PyCapsule_New(p, sig, NULL); -#else - cobj = PyCObject_FromVoidPtr(p, NULL); -#endif - return cobj; -} - -static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *x) { - const char neg_one = (char) -1, const_zero = 0; +/* CIntFromPy */ + static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *x) { + const char neg_one = (char) -1, const_zero = (char) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { @@ -22958,36 +26300,129 @@ static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *x) { #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { -#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS +#if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { - case 0: return 0; - case 1: __PYX_VERIFY_RETURN_INT(char, digit, ((PyLongObject*)x)->ob_digit[0]); + case 0: return (char) 0; + case 1: __PYX_VERIFY_RETURN_INT(char, digit, digits[0]) + case 2: + if (8 * sizeof(char) > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) >= 2 * PyLong_SHIFT) { + return (char) (((((char)digits[1]) << PyLong_SHIFT) | (char)digits[0])); + } + } + break; + case 3: + if (8 * sizeof(char) > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) >= 3 * PyLong_SHIFT) { + return (char) (((((((char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0])); + } + } + break; + case 4: + if (8 * sizeof(char) > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) >= 4 * PyLong_SHIFT) { + return (char) (((((((((char)digits[3]) << PyLong_SHIFT) | (char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0])); + } + } + break; } - #endif #endif +#if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } +#else + { + int result = PyObject_RichCompareBool(x, Py_False, Py_LT); + if (unlikely(result < 0)) + return (char) -1; + if (unlikely(result == 1)) + goto raise_neg_overflow; + } +#endif if (sizeof(char) <= sizeof(unsigned long)) { - __PYX_VERIFY_RETURN_INT(char, unsigned long, PyLong_AsUnsignedLong(x)) - } else if (sizeof(char) <= sizeof(unsigned long long)) { - __PYX_VERIFY_RETURN_INT(char, unsigned long long, PyLong_AsUnsignedLongLong(x)) + __PYX_VERIFY_RETURN_INT_EXC(char, unsigned long, PyLong_AsUnsignedLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(char) <= sizeof(unsigned PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(char, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) +#endif } } else { -#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS +#if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { - case 0: return 0; - case 1: __PYX_VERIFY_RETURN_INT(char, digit, +(((PyLongObject*)x)->ob_digit[0])); - case -1: __PYX_VERIFY_RETURN_INT(char, sdigit, -(sdigit) ((PyLongObject*)x)->ob_digit[0]); + case 0: return (char) 0; + case -1: __PYX_VERIFY_RETURN_INT(char, sdigit, (sdigit) (-(sdigit)digits[0])) + case 1: __PYX_VERIFY_RETURN_INT(char, digit, +digits[0]) + case -2: + if (8 * sizeof(char) - 1 > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) - 1 > 2 * PyLong_SHIFT) { + return (char) (((char)-1)*(((((char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + } + } + break; + case 2: + if (8 * sizeof(char) > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) - 1 > 2 * PyLong_SHIFT) { + return (char) ((((((char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + } + } + break; + case -3: + if (8 * sizeof(char) - 1 > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) - 1 > 3 * PyLong_SHIFT) { + return (char) (((char)-1)*(((((((char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + } + } + break; + case 3: + if (8 * sizeof(char) > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) - 1 > 3 * PyLong_SHIFT) { + return (char) ((((((((char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + } + } + break; + case -4: + if (8 * sizeof(char) - 1 > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) - 1 > 4 * PyLong_SHIFT) { + return (char) (((char)-1)*(((((((((char)digits[3]) << PyLong_SHIFT) | (char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + } + } + break; + case 4: + if (8 * sizeof(char) > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) - 1 > 4 * PyLong_SHIFT) { + return (char) ((((((((((char)digits[3]) << PyLong_SHIFT) | (char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + } + } + break; } - #endif #endif if (sizeof(char) <= sizeof(long)) { - __PYX_VERIFY_RETURN_INT(char, long, PyLong_AsLong(x)) - } else if (sizeof(char) <= sizeof(long long)) { - __PYX_VERIFY_RETURN_INT(char, long long, PyLong_AsLongLong(x)) + __PYX_VERIFY_RETURN_INT_EXC(char, long, PyLong_AsLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(char) <= sizeof(PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(char, PY_LONG_LONG, PyLong_AsLongLong(x)) +#endif } } { @@ -22996,7 +26431,7 @@ static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *x) { "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else char val; - PyObject *v = __Pyx_PyNumber_Int(x); + PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; @@ -23019,7 +26454,7 @@ static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *x) { } } else { char val; - PyObject *tmp = __Pyx_PyNumber_Int(x); + PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (char) -1; val = __Pyx_PyInt_As_char(tmp); Py_DECREF(tmp); @@ -23035,8 +26470,9 @@ raise_neg_overflow: return (char) -1; } -static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { - const long neg_one = (long) -1, const_zero = 0; +/* CIntFromPy */ + static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { + const long neg_one = (long) -1, const_zero = (long) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { @@ -23053,36 +26489,129 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { -#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS +#if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { - case 0: return 0; - case 1: __PYX_VERIFY_RETURN_INT(long, digit, ((PyLongObject*)x)->ob_digit[0]); + case 0: return (long) 0; + case 1: __PYX_VERIFY_RETURN_INT(long, digit, digits[0]) + case 2: + if (8 * sizeof(long) > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) >= 2 * PyLong_SHIFT) { + return (long) (((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); + } + } + break; + case 3: + if (8 * sizeof(long) > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) >= 3 * PyLong_SHIFT) { + return (long) (((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); + } + } + break; + case 4: + if (8 * sizeof(long) > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) >= 4 * PyLong_SHIFT) { + return (long) (((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); + } + } + break; } - #endif #endif +#if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } +#else + { + int result = PyObject_RichCompareBool(x, Py_False, Py_LT); + if (unlikely(result < 0)) + return (long) -1; + if (unlikely(result == 1)) + goto raise_neg_overflow; + } +#endif if (sizeof(long) <= sizeof(unsigned long)) { - __PYX_VERIFY_RETURN_INT(long, unsigned long, PyLong_AsUnsignedLong(x)) - } else if (sizeof(long) <= sizeof(unsigned long long)) { - __PYX_VERIFY_RETURN_INT(long, unsigned long long, PyLong_AsUnsignedLongLong(x)) + __PYX_VERIFY_RETURN_INT_EXC(long, unsigned long, PyLong_AsUnsignedLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(long, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) +#endif } } else { -#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS +#if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { - case 0: return 0; - case 1: __PYX_VERIFY_RETURN_INT(long, digit, +(((PyLongObject*)x)->ob_digit[0])); - case -1: __PYX_VERIFY_RETURN_INT(long, sdigit, -(sdigit) ((PyLongObject*)x)->ob_digit[0]); + case 0: return (long) 0; + case -1: __PYX_VERIFY_RETURN_INT(long, sdigit, (sdigit) (-(sdigit)digits[0])) + case 1: __PYX_VERIFY_RETURN_INT(long, digit, +digits[0]) + case -2: + if (8 * sizeof(long) - 1 > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { + return (long) (((long)-1)*(((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); + } + } + break; + case 2: + if (8 * sizeof(long) > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { + return (long) ((((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); + } + } + break; + case -3: + if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { + return (long) (((long)-1)*(((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); + } + } + break; + case 3: + if (8 * sizeof(long) > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { + return (long) ((((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); + } + } + break; + case -4: + if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { + return (long) (((long)-1)*(((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); + } + } + break; + case 4: + if (8 * sizeof(long) > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { + return (long) ((((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); + } + } + break; } - #endif #endif if (sizeof(long) <= sizeof(long)) { - __PYX_VERIFY_RETURN_INT(long, long, PyLong_AsLong(x)) - } else if (sizeof(long) <= sizeof(long long)) { - __PYX_VERIFY_RETURN_INT(long, long long, PyLong_AsLongLong(x)) + __PYX_VERIFY_RETURN_INT_EXC(long, long, PyLong_AsLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(long) <= sizeof(PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(long, PY_LONG_LONG, PyLong_AsLongLong(x)) +#endif } } { @@ -23091,7 +26620,7 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else long val; - PyObject *v = __Pyx_PyNumber_Int(x); + PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; @@ -23114,7 +26643,7 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { } } else { long val; - PyObject *tmp = __Pyx_PyNumber_Int(x); + PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (long) -1; val = __Pyx_PyInt_As_long(tmp); Py_DECREF(tmp); @@ -23130,7 +26659,8 @@ raise_neg_overflow: return (long) -1; } -static int __Pyx_check_binary_version(void) { +/* CheckBinaryVersion */ + static int __Pyx_check_binary_version(void) { char ctversion[4], rtversion[4]; PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION); PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion()); @@ -23145,7 +26675,8 @@ static int __Pyx_check_binary_version(void) { return 0; } -#ifndef __PYX_HAVE_RT_ImportModule +/* ModuleImport */ + #ifndef __PYX_HAVE_RT_ImportModule #define __PYX_HAVE_RT_ImportModule static PyObject *__Pyx_ImportModule(const char *name) { PyObject *py_name = 0; @@ -23162,7 +26693,8 @@ bad: } #endif -#ifndef __PYX_HAVE_RT_ImportType +/* TypeImport */ + #ifndef __PYX_HAVE_RT_ImportType #define __PYX_HAVE_RT_ImportType static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name, size_t size, int strict) @@ -23208,14 +26740,14 @@ static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class #endif if (!strict && (size_t)basicsize > size) { PyOS_snprintf(warning, sizeof(warning), - "%s.%s size changed, may indicate binary incompatibility", - module_name, class_name); + "%s.%s size changed, may indicate binary incompatibility. Expected %zd, got %zd", + module_name, class_name, basicsize, size); if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad; } else if ((size_t)basicsize != size) { PyErr_Format(PyExc_ValueError, - "%.200s.%.200s has the wrong size, try recompiling", - module_name, class_name); + "%.200s.%.200s has the wrong size, try recompiling. Expected %zd, got %zd", + module_name, class_name, basicsize, size); goto bad; } return (PyTypeObject *)result; @@ -23226,7 +26758,8 @@ bad: } #endif -static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { +/* InitStrings */ + static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { while (t->p) { #if PY_MAJOR_VERSION < 3 if (t->is_unicode) { @@ -23264,7 +26797,7 @@ static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) { return __Pyx_PyObject_AsStringAndSize(o, &ignore); } static CYTHON_INLINE char* __Pyx_PyObject_AsStringAndSize(PyObject* o, Py_ssize_t *length) { -#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT +#if CYTHON_COMPILING_IN_CPYTHON && (__PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT) if ( #if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII __Pyx_sys_getdefaultencoding_not_ascii && @@ -23305,7 +26838,7 @@ static CYTHON_INLINE char* __Pyx_PyObject_AsStringAndSize(PyObject* o, Py_ssize_ #endif } else #endif -#if !CYTHON_COMPILING_IN_PYPY +#if (!CYTHON_COMPILING_IN_PYPY) || (defined(PyByteArray_AS_STRING) && defined(PyByteArray_GET_SIZE)) if (PyByteArray_Check(o)) { *length = PyByteArray_GET_SIZE(o); return PyByteArray_AS_STRING(o); @@ -23326,8 +26859,10 @@ static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) { if (is_true | (x == Py_False) | (x == Py_None)) return is_true; else return PyObject_IsTrue(x); } -static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) { +static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x) { +#if CYTHON_USE_TYPE_SLOTS PyNumberMethods *m; +#endif const char *name = NULL; PyObject *res = NULL; #if PY_MAJOR_VERSION < 3 @@ -23335,9 +26870,10 @@ static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) { #else if (PyLong_Check(x)) #endif - return Py_INCREF(x), x; + return __Pyx_NewRef(x); +#if CYTHON_USE_TYPE_SLOTS m = Py_TYPE(x)->tp_as_number; -#if PY_MAJOR_VERSION < 3 + #if PY_MAJOR_VERSION < 3 if (m && m->nb_int) { name = "int"; res = PyNumber_Int(x); @@ -23346,11 +26882,14 @@ static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) { name = "long"; res = PyNumber_Long(x); } -#else + #else if (m && m->nb_int) { name = "int"; res = PyNumber_Long(x); } + #endif +#else + res = PyNumber_Int(x); #endif if (res) { #if PY_MAJOR_VERSION < 3 @@ -23375,18 +26914,55 @@ static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { Py_ssize_t ival; PyObject *x; #if PY_MAJOR_VERSION < 3 - if (likely(PyInt_CheckExact(b))) - return PyInt_AS_LONG(b); + if (likely(PyInt_CheckExact(b))) { + if (sizeof(Py_ssize_t) >= sizeof(long)) + return PyInt_AS_LONG(b); + else + return PyInt_AsSsize_t(x); + } #endif if (likely(PyLong_CheckExact(b))) { - #if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS - switch (Py_SIZE(b)) { - case -1: return -(sdigit)((PyLongObject*)b)->ob_digit[0]; - case 0: return 0; - case 1: return ((PyLongObject*)b)->ob_digit[0]; - } - #endif + #if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)b)->ob_digit; + const Py_ssize_t size = Py_SIZE(b); + if (likely(__Pyx_sst_abs(size) <= 1)) { + ival = likely(size) ? digits[0] : 0; + if (size == -1) ival = -ival; + return ival; + } else { + switch (size) { + case 2: + if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) { + return (Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); + } + break; + case -2: + if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) { + return -(Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); + } + break; + case 3: + if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) { + return (Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); + } + break; + case -3: + if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) { + return -(Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); + } + break; + case 4: + if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) { + return (Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); + } + break; + case -4: + if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) { + return -(Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); + } + break; + } + } #endif return PyLong_AsSsize_t(b); } diff --git a/silx/math/medianfilter/medianfilter.pyx b/silx/math/medianfilter/medianfilter.pyx index c7c9497..4d0a1e9 100644 --- a/silx/math/medianfilter/medianfilter.pyx +++ b/silx/math/medianfilter/medianfilter.pyx @@ -35,7 +35,6 @@ cimport cython cimport median_filter import numpy cimport numpy as cnumpy -cdef Py_ssize_t size = 10 from libcpp cimport bool ctypedef unsigned long uint64 @@ -43,7 +42,10 @@ ctypedef unsigned int uint32 ctypedef unsigned short uint16 -def medfilt1d(data, kernel_size=3, bool conditional=False): +MODES = {'nearest':0, 'reflect':1, 'mirror':2, 'shrink':3} + + +def medfilt1d(data, kernel_size=3, bool conditional=False, mode='nearest'): """Function computing the median filter of the given input. Behavior at boundaries: the algorithm is reducing the size of the window/kernel for pixels at boundaries (there is no mirroring). @@ -57,10 +59,10 @@ def medfilt1d(data, kernel_size=3, bool conditional=False): :returns: the array with the median value for each pixel. """ - return medfilt(data, kernel_size, conditional) + return medfilt(data, kernel_size, conditional, mode) -def medfilt2d(image, kernel_size=3, bool conditional=False): +def medfilt2d(image, kernel_size=3, bool conditional=False, mode='nearest'): """Function computing the median filter of the given input. Behavior at boundaries: the algorithm is reducing the size of the window/kernel for pixels at boundaries (there is no mirroring). @@ -75,10 +77,10 @@ def medfilt2d(image, kernel_size=3, bool conditional=False): :returns: the array with the median value for each pixel. """ - return medfilt(image, kernel_size, conditional) + return medfilt(image, kernel_size, conditional, mode) -def medfilt(data, kernel_size=3, bool conditional=False): +def medfilt(data, kernel_size=3, bool conditional=False, mode='nearest'): """Function computing the median filter of the given input. Behavior at boundaries: the algorithm is reducing the size of the window/kernel for pixels at boundaries (there is no mirroring). @@ -90,9 +92,15 @@ def medfilt(data, kernel_size=3, bool conditional=False): a list of (kernel_height, kernel_width) :param bool conditional: True if we want to apply a conditional median filtering. + :param str mode: the algorithm used to determine how values at borders + are determined. :returns: the array with the median value for each pixel. """ + if mode not in MODES: + err = 'Requested mode %s is unknowed.' % mode + raise ValueError(err) + reshaped = False if len(data.shape) == 1: data = data.reshape(data.shape[0], 1) @@ -134,7 +142,8 @@ def medfilt(data, kernel_size=3, bool conditional=False): medfilterfc(input_buffer=data, output_buffer=output_buffer, kernel_size=ker_dim, - conditional=conditional) + conditional=conditional, + mode=MODES[mode]) if reshaped: data = data.reshape(data.shape[0]) @@ -170,27 +179,55 @@ def check(input_buffer, output_buffer): @cython.boundscheck(False) @cython.wraparound(False) @cython.initializedcheck(False) +def reflect(int index, int length_max): + """find the correct index into [0, length_max-1] for index in reflect mode + + :param int index: the index to move into [0, length_max-1] in reflect mode + :param int length_max: the higher bound limit + """ + return median_filter.reflect(index, length_max) + + +@cython.cdivision(True) +@cython.boundscheck(False) +@cython.wraparound(False) +@cython.initializedcheck(False) +def mirror(int index, int length_max): + """find the correct index into [0, length_max-1] for index in mirror mode + + :param int index: the index to move into [0, length_max-1] in mirror mode + :param int length_max: the higher bound limit + """ + return median_filter.mirror(index, length_max) + + +@cython.cdivision(True) +@cython.boundscheck(False) +@cython.wraparound(False) +@cython.initializedcheck(False) def _median_filter_float32(float[:, ::1] input_buffer not None, float[:, ::1] output_buffer not None, cnumpy.int32_t[::1] kernel_size not None, - bool conditional): + bool conditional, + int mode): cdef: - int x = 0 + int y = 0 int image_dim = input_buffer.shape[1] - 1 int[2] buffer_shape buffer_shape[0] = input_buffer.shape[0] buffer_shape[1] = input_buffer.shape[1] - for x in prange(input_buffer.shape[0], nogil=True): + for y in prange(input_buffer.shape[0], nogil=True): median_filter.median_filter[float](<float*> & input_buffer[0,0], <float*> & output_buffer[0,0], <int*>& kernel_size[0], <int*>buffer_shape, - x, + y, 0, image_dim, - conditional) + conditional, + mode) @cython.cdivision(True) @@ -200,24 +237,26 @@ def _median_filter_float32(float[:, ::1] input_buffer not None, def _median_filter_float64(double[:, ::1] input_buffer not None, double[:, ::1] output_buffer not None, cnumpy.int32_t[::1] kernel_size not None, - bool conditional): + bool conditional, + int mode): cdef: - int x = 0 + int y = 0 int image_dim = input_buffer.shape[1] - 1 int[2] buffer_shape buffer_shape[0] = input_buffer.shape[0] buffer_shape[1] = input_buffer.shape[1] - for x in prange(input_buffer.shape[0], nogil=True): + for y in prange(input_buffer.shape[0], nogil=True): median_filter.median_filter[double](<double*> & input_buffer[0, 0], <double*> & output_buffer[0, 0], <int*>&kernel_size[0], <int*>buffer_shape, - x, + y, 0, image_dim, - conditional) + conditional, + mode) @cython.cdivision(True) @@ -227,24 +266,26 @@ def _median_filter_float64(double[:, ::1] input_buffer not None, def _median_filter_int64(cnumpy.int64_t[:, ::1] input_buffer not None, cnumpy.int64_t[:, ::1] output_buffer not None, cnumpy.int32_t[::1] kernel_size not None, - bool conditional): + bool conditional, + int mode): cdef: - int x = 0 + int y = 0 int image_dim = input_buffer.shape[1] - 1 int[2] buffer_shape buffer_shape[0] = input_buffer.shape[0] buffer_shape[1] = input_buffer.shape[1] - for x in prange(input_buffer.shape[0], nogil=True): + for y in prange(input_buffer.shape[0], nogil=True): median_filter.median_filter[long](<long*> & input_buffer[0,0], <long*> & output_buffer[0, 0], <int*>&kernel_size[0], <int*>buffer_shape, - x, + y, 0, image_dim, - conditional); + conditional, + mode) @cython.cdivision(True) @cython.boundscheck(False) @@ -254,24 +295,26 @@ def _median_filter_uint64( cnumpy.uint64_t[:, ::1] input_buffer not None, cnumpy.uint64_t[:, ::1] output_buffer not None, cnumpy.int32_t[::1] kernel_size not None, - bool conditional): + bool conditional, + int mode): cdef: - int x = 0 + int y = 0 int image_dim = input_buffer.shape[1] - 1 int[2] buffer_shape buffer_shape[0] = input_buffer.shape[0] buffer_shape[1] = input_buffer.shape[1] - for x in prange(input_buffer.shape[0], nogil=True): + for y in prange(input_buffer.shape[0], nogil=True): median_filter.median_filter[uint64](<uint64*> & input_buffer[0,0], <uint64*> & output_buffer[0, 0], <int*>&kernel_size[0], <int*>buffer_shape, - x, + y, 0, image_dim, - conditional) + conditional, + mode) @cython.cdivision(True) @@ -281,24 +324,26 @@ def _median_filter_uint64( def _median_filter_int32(cnumpy.int32_t[:, ::1] input_buffer not None, cnumpy.int32_t[:, ::1] output_buffer not None, cnumpy.int32_t[::1] kernel_size not None, - bool conditional): + bool conditional, + int mode): cdef: - int x = 0 + int y = 0 int image_dim = input_buffer.shape[1] - 1 int[2] buffer_shape buffer_shape[0] = input_buffer.shape[0] buffer_shape[1] = input_buffer.shape[1] - for x in prange(input_buffer.shape[0], nogil=True): + for y in prange(input_buffer.shape[0], nogil=True): median_filter.median_filter[int](<int*> & input_buffer[0,0], <int*> & output_buffer[0, 0], <int*>&kernel_size[0], <int*>buffer_shape, - x, + y, 0, image_dim, - conditional) + conditional, + mode) @cython.cdivision(True) @@ -308,24 +353,26 @@ def _median_filter_int32(cnumpy.int32_t[:, ::1] input_buffer not None, def _median_filter_uint32(cnumpy.uint32_t[:, ::1] input_buffer not None, cnumpy.uint32_t[:, ::1] output_buffer not None, cnumpy.int32_t[::1] kernel_size not None, - bool conditional): + bool conditional, + int mode): cdef: - int x = 0 + int y = 0 int image_dim = input_buffer.shape[1] - 1 int[2] buffer_shape buffer_shape[0] = input_buffer.shape[0] buffer_shape[1] = input_buffer.shape[1] - for x in prange(input_buffer.shape[0], nogil=True): + for y in prange(input_buffer.shape[0], nogil=True): median_filter.median_filter[uint32](<uint32*> & input_buffer[0,0], <uint32*> & output_buffer[0, 0], <int*>&kernel_size[0], <int*>buffer_shape, - x, + y, 0, image_dim, - conditional) + conditional, + mode) @cython.cdivision(True) @@ -335,24 +382,26 @@ def _median_filter_uint32(cnumpy.uint32_t[:, ::1] input_buffer not None, def _median_filter_int16(cnumpy.int16_t[:, ::1] input_buffer not None, cnumpy.int16_t[:, ::1] output_buffer not None, cnumpy.int32_t[::1] kernel_size not None, - bool conditional): + bool conditional, + int mode): cdef: - int x = 0 + int y = 0 int image_dim = input_buffer.shape[1] - 1 int[2] buffer_shape buffer_shape[0] = input_buffer.shape[0] buffer_shape[1] = input_buffer.shape[1] - for x in prange(input_buffer.shape[0], nogil=True): + for y in prange(input_buffer.shape[0], nogil=True): median_filter.median_filter[short](<short*> & input_buffer[0,0], <short*> & output_buffer[0, 0], <int*>&kernel_size[0], <int*>buffer_shape, - x, + y, 0, image_dim, - conditional) + conditional, + mode) @cython.cdivision(True) @@ -363,21 +412,23 @@ def _median_filter_uint16( cnumpy.ndarray[cnumpy.uint16_t, ndim=2, mode='c'] input_buffer not None, cnumpy.ndarray[cnumpy.uint16_t, ndim=2, mode='c'] output_buffer not None, cnumpy.ndarray[cnumpy.int32_t, ndim=1, mode='c'] kernel_size not None, - bool conditional): + bool conditional, + int mode): cdef: - int x = 0 + int y = 0 int image_dim = input_buffer.shape[1] - 1 int[2] buffer_shape, buffer_shape[0] = input_buffer.shape[0] buffer_shape[1] = input_buffer.shape[1] - for x in prange(input_buffer.shape[0], nogil=True): + for y in prange(input_buffer.shape[0], nogil=True): median_filter.median_filter[uint16](<uint16*> & input_buffer[0, 0], <uint16*> & output_buffer[0, 0], <int*>&kernel_size[0], <int*>buffer_shape, - x, + y, 0, image_dim, - conditional) + conditional, + mode) diff --git a/silx/math/medianfilter/test/test_medianfilter.py b/silx/math/medianfilter/test/test_medianfilter.py index 8a26d3a..a4c55b2 100644 --- a/silx/math/medianfilter/test/test_medianfilter.py +++ b/silx/math/medianfilter/test/test_medianfilter.py @@ -1,5 +1,5 @@ # coding: utf-8 -# /*########################################################################## +# ########################################################################## # Copyright (C) 2017 European Synchrotron Radiation Facility # # Permission is hereby granted, free of charge, to any person obtaining a copy @@ -20,7 +20,7 @@ # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN # THE SOFTWARE. # -# ############################################################################*/ +# ############################################################################ """Tests of the median filter""" __authors__ = ["H. Payno"] @@ -29,8 +29,9 @@ __date__ = "02/05/2017" import unittest import numpy -import os from silx.math.medianfilter import medfilt2d +from silx.math.medianfilter.medianfilter import reflect, mirror +from silx.math.medianfilter.medianfilter import MODES as silx_mf_modes from silx.test.utils import ParametricTestCase try: import scipy @@ -43,17 +44,23 @@ else: import logging _logger = logging.getLogger(__name__) +RANDOM_FLOAT_MAT = numpy.array([ + [0.05564293, 0.62717157, 0.75002406, 0.40555336, 0.70278975], + [0.76532598, 0.02839148, 0.05272484, 0.65166994, 0.42161216], + [0.23067427, 0.74219128, 0.56049024, 0.44406320, 0.28773158], + [0.81025249, 0.20303021, 0.68382382, 0.46372299, 0.81281709], + [0.94691602, 0.07813661, 0.81651256, 0.84220106, 0.33623165]]) + +RANDOM_INT_MAT = numpy.array([ + [0, 5, 2, 6, 1], + [2, 3, 1, 7, 1], + [9, 8, 6, 7, 8], + [5, 6, 8, 2, 4]]) + class TestMedianFilterNearest(ParametricTestCase): """Unit tests for the median filter in nearest mode""" - random_mat = numpy.array([ - [0.05564293, 0.62717157, 0.75002406, 0.40555336, 0.70278975], - [0.76532598, 0.02839148, 0.05272484, 0.65166994, 0.42161216], - [0.23067427, 0.74219128, 0.56049024, 0.44406320, 0.28773158], - [0.81025249, 0.20303021, 0.68382382, 0.46372299, 0.81281709], - [0.94691602, 0.07813661, 0.81651256, 0.84220106, 0.33623165]]) - def testFilter3_100(self): """Test median filter on a 10x10 matrix with a 3x3 kernel.""" dataIn = numpy.arange(100, dtype=numpy.int32) @@ -61,7 +68,8 @@ class TestMedianFilterNearest(ParametricTestCase): dataOut = medfilt2d(image=dataIn, kernel_size=(3, 3), - conditional=False) + conditional=False, + mode='nearest') self.assertTrue(dataOut[0, 0] == 1) self.assertTrue(dataOut[9, 0] == 90) self.assertTrue(dataOut[9, 9] == 98) @@ -72,7 +80,7 @@ class TestMedianFilterNearest(ParametricTestCase): self.assertTrue(dataOut[4, 4] == 44) def testFilter3_9(self): - "Test median filter on a 3x3 matrix a 3x3 kernel." + "Test median filter on a 3x3 matrix with a 3x3 kernel." dataIn = numpy.array([0, -1, 1, 12, 6, -2, 100, 4, 12], @@ -80,7 +88,8 @@ class TestMedianFilterNearest(ParametricTestCase): dataIn = dataIn.reshape((3, 3)) dataOut = medfilt2d(image=dataIn, kernel_size=(3, 3), - conditional=False) + conditional=False, + mode='nearest') self.assertTrue(dataOut.shape == dataIn.shape) self.assertTrue(dataOut[1, 1] == 4) self.assertTrue(dataOut[0, 0] == 0) @@ -95,146 +104,379 @@ class TestMedianFilterNearest(ParametricTestCase): dataOut = medfilt2d(image=dataIn, kernel_size=(1, 1), - conditional=False) + conditional=False, + mode='nearest') self.assertTrue(numpy.array_equal(dataIn, dataOut)) - def testInputDataIsNotModify(self): - """Make sure input data is not modify by the median filter""" - dataIn = numpy.arange(100, dtype=numpy.int32) - dataIn = dataIn.reshape((10, 10)) - dataInCopy = dataIn.copy() - - medfilt2d(image=dataIn, - kernel_size=(3, 3), - conditional=False) - self.assertTrue(numpy.array_equal(dataIn, dataInCopy)) - - def testThreads(self): - """Make sure the result doesn't depends on the number of threads used - """ - dataIn = numpy.random.rand(100, 100) - - former = os.environ.get("OMP_NUM_THREADS") - os.environ["OMP_NUM_THREADS"] = "1" - dataOut1Thr = medfilt2d(image=dataIn, - kernel_size=(3, 3), - conditional=False, - ) - os.environ["OMP_NUM_THREADS"] = "2" - dataOut2Thr = medfilt2d(image=dataIn, - kernel_size=(3, 3), - conditional=False) - os.environ["OMP_NUM_THREADS"] = "4" - dataOut4Thr = medfilt2d(image=dataIn, - kernel_size=(3, 3), - conditional=False) - os.environ["OMP_NUM_THREADS"] = "8" - dataOut8Thr = medfilt2d(image=dataIn, - kernel_size=(3, 3), - conditional=False) - if former is None: - os.environ.pop("OMP_NUM_THREADS") - else: - os.environ["OMP_NUM_THREADS"] = former - - self.assertTrue(numpy.array_equal(dataOut1Thr, dataOut2Thr)) - self.assertTrue(numpy.array_equal(dataOut1Thr, dataOut4Thr)) - self.assertTrue(numpy.array_equal(dataOut1Thr, dataOut8Thr)) - def testFilter3Conditionnal(self): - """Test that the conditional filter apply correctly""" + """Test that the conditional filter apply correctly in a 10x10 matrix + with a 3x3 kernel + """ dataIn = numpy.arange(100, dtype=numpy.int32) dataIn = dataIn.reshape((10, 10)) dataOut = medfilt2d(image=dataIn, kernel_size=(3, 3), - conditional=True) + conditional=True, + mode='nearest') self.assertTrue(dataOut[0, 0] == 1) self.assertTrue(dataOut[0, 1] == 1) self.assertTrue(numpy.array_equal(dataOut[1:8, 1:8], dataIn[1:8, 1:8])) self.assertTrue(dataOut[9, 9] == 98) - def testTypes(self): - """Test that all needed types have their implementation of the median - filter - """ - for testType in [numpy.float32, numpy.float64, numpy.int16, - numpy.uint16, numpy.int32, numpy.int64, numpy.uint64]: - data = (numpy.random.rand(10, 10) * 65000).astype(testType) - out = medfilt2d(image=data, - kernel_size=(3, 3), - conditional=False) - self.assertTrue(out.dtype.type is testType) - def testFilter3_1D(self): - """Simple test of a three by three kernel median filter""" + """Simple test of a 3x3 median filter on a 1D array""" dataIn = numpy.arange(100, dtype=numpy.int32) dataOut = medfilt2d(image=dataIn, kernel_size=(5), - conditional=False) + conditional=False, + mode='nearest') self.assertTrue(dataOut[0] == 0) self.assertTrue(dataOut[9] == 9) self.assertTrue(dataOut[99] == 99) - @unittest.skipUnless(scipy, "scipy not available") + +class TestMedianFilterReflect(ParametricTestCase): + """Unit test for the median filter in reflect mode""" + + def testArange9(self): + """Test from a 3x3 window to RANDOM_FLOAT_MAT""" + img = numpy.arange(9, dtype=numpy.int32) + img = img.reshape(3, 3) + kernel = (3, 3) + res = medfilt2d(image=img, + kernel_size=kernel, + conditional=False, + mode='reflect') + self.assertTrue( + numpy.array_equal(res.ravel(), [1, 2, 2, 3, 4, 5, 6, 6, 7])) + + def testRandom10(self): + """Test a (5, 3) window to a RANDOM_FLOAT_MAT""" + kernel = (5, 3) + + thRes = numpy.array([ + [0.23067427, 0.56049024, 0.56049024, 0.4440632, 0.42161216], + [0.23067427, 0.62717157, 0.56049024, 0.56049024, 0.46372299], + [0.62717157, 0.62717157, 0.56049024, 0.56049024, 0.4440632], + [0.76532598, 0.68382382, 0.56049024, 0.56049024, 0.42161216], + [0.81025249, 0.68382382, 0.56049024, 0.68382382, 0.46372299]]) + + res = medfilt2d(image=RANDOM_FLOAT_MAT, + kernel_size=kernel, + conditional=False, + mode='reflect') + + self.assertTrue(numpy.array_equal(thRes, res)) + + def testApplyReflect1D(self): + """Test the reflect function used for the median filter in reflect mode + """ + # test for inside values + self.assertTrue(reflect(2, 3) == 2) + # test for boundaries values + self.assertTrue(reflect(3, 3) == 2) + self.assertTrue(reflect(4, 3) == 1) + self.assertTrue(reflect(5, 3) == 0) + self.assertTrue(reflect(6, 3) == 0) + self.assertTrue(reflect(7, 3) == 1) + self.assertTrue(reflect(-1, 3) == 0) + self.assertTrue(reflect(-2, 3) == 1) + self.assertTrue(reflect(-3, 3) == 2) + self.assertTrue(reflect(-4, 3) == 2) + self.assertTrue(reflect(-5, 3) == 1) + self.assertTrue(reflect(-6, 3) == 0) + self.assertTrue(reflect(-7, 3) == 0) + + def testRandom10Conditionnal(self): + """Test the median filter in reflect mode and with the conditionnal + option""" + kernel = (3, 1) + + thRes = numpy.array([ + [0.05564293, 0.62717157, 0.75002406, 0.40555336, 0.70278975], + [0.23067427, 0.62717157, 0.56049024, 0.44406320, 0.42161216], + [0.76532598, 0.20303021, 0.56049024, 0.46372299, 0.42161216], + [0.81025249, 0.20303021, 0.68382382, 0.46372299, 0.33623165], + [0.94691602, 0.07813661, 0.81651256, 0.84220106, 0.33623165]]) + + res = medfilt2d(image=RANDOM_FLOAT_MAT, + kernel_size=kernel, + conditional=True, + mode='reflect') + self.assertTrue(numpy.array_equal(thRes, res)) + + +class TestMedianFilterMirror(ParametricTestCase): + """Unit test for the median filter in mirror mode + """ + + def testApplyMirror1D(self): + """Test the reflect function used for the median filter in mirror mode + """ + # test for inside values + self.assertTrue(mirror(2, 3) == 2) + # test for boundaries values + self.assertTrue(mirror(4, 4) == 2) + self.assertTrue(mirror(5, 4) == 1) + self.assertTrue(mirror(6, 4) == 0) + self.assertTrue(mirror(7, 4) == 1) + self.assertTrue(mirror(8, 4) == 2) + self.assertTrue(mirror(-1, 4) == 1) + self.assertTrue(mirror(-2, 4) == 2) + self.assertTrue(mirror(-3, 4) == 3) + self.assertTrue(mirror(-4, 4) == 2) + self.assertTrue(mirror(-5, 4) == 1) + self.assertTrue(mirror(-6, 4) == 0) + + def testRandom10(self): + """Test a (5, 3) window to a random array""" + kernel = (3, 5) + + thRes = numpy.array([ + [0.05272484, 0.40555336, 0.42161216, 0.42161216, 0.42161216], + [0.56049024, 0.56049024, 0.4440632, 0.4440632, 0.4440632], + [0.56049024, 0.46372299, 0.46372299, 0.46372299, 0.46372299], + [0.68382382, 0.56049024, 0.56049024, 0.46372299, 0.56049024], + [0.68382382, 0.46372299, 0.68382382, 0.46372299, 0.68382382]]) + + res = medfilt2d(image=RANDOM_FLOAT_MAT, + kernel_size=kernel, + conditional=False, + mode='mirror') + + self.assertTrue(numpy.array_equal(thRes, res)) + + def testRandom10Conditionnal(self): + """Test the median filter in reflect mode and with the conditionnal + option""" + kernel = (1, 3) + + thRes = numpy.array([ + [0.62717157, 0.62717157, 0.62717157, 0.70278975, 0.40555336], + [0.02839148, 0.05272484, 0.05272484, 0.42161216, 0.65166994], + [0.74219128, 0.56049024, 0.56049024, 0.44406320, 0.44406320], + [0.20303021, 0.68382382, 0.46372299, 0.68382382, 0.46372299], + [0.07813661, 0.81651256, 0.81651256, 0.81651256, 0.84220106]]) + + res = medfilt2d(image=RANDOM_FLOAT_MAT, + kernel_size=kernel, + conditional=True, + mode='mirror') + + self.assertTrue(numpy.array_equal(thRes, res)) + + +class TestMedianFilterShrink(ParametricTestCase): + """Unit test for the median filter in mirror mode + """ + + def testRandom_3x3(self): + """Test the median filter in shrink mode and with the conditionnal + option""" + kernel = (3, 3) + + thRes = numpy.array([ + [0.62717157, 0.62717157, 0.62717157, 0.65166994, 0.65166994], + [0.62717157, 0.56049024, 0.56049024, 0.44406320, 0.44406320], + [0.74219128, 0.56049024, 0.46372299, 0.46372299, 0.46372299], + [0.74219128, 0.68382382, 0.56049024, 0.56049024, 0.46372299], + [0.81025249, 0.81025249, 0.68382382, 0.81281709, 0.81281709]]) + + res = medfilt2d(image=RANDOM_FLOAT_MAT, + kernel_size=kernel, + conditional=False, + mode='shrink') + + self.assertTrue(numpy.array_equal(thRes, res)) + + def testBounds(self): + """Test the median filter in shrink mode with 3 different kernels + which should return the same result due to the large values of kernels + used. + """ + kernel1 = (1, 9) + kernel2 = (1, 11) + kernel3 = (1, 21) + + thRes = numpy.array([[2, 2, 2, 2, 2], + [2, 2, 2, 2, 2], + [8, 8, 8, 8, 8], + [5, 5, 5, 5, 5]]) + + resK1 = medfilt2d(image=RANDOM_INT_MAT, + kernel_size=kernel1, + conditional=False, + mode='shrink') + + resK2 = medfilt2d(image=RANDOM_INT_MAT, + kernel_size=kernel2, + conditional=False, + mode='shrink') + + resK3 = medfilt2d(image=RANDOM_INT_MAT, + kernel_size=kernel3, + conditional=False, + mode='shrink') + + self.assertTrue(numpy.array_equal(resK1, thRes)) + self.assertTrue(numpy.array_equal(resK2, resK1)) + self.assertTrue(numpy.array_equal(resK3, resK1)) + + def testRandom_3x3Conditionnal(self): + """Test the median filter in reflect mode and with the conditionnal + option""" + kernel = (3, 3) + + thRes = numpy.array([ + [0.05564293, 0.62717157, 0.62717157, 0.40555336, 0.65166994], + [0.62717157, 0.56049024, 0.05272484, 0.65166994, 0.42161216], + [0.23067427, 0.74219128, 0.56049024, 0.44406320, 0.46372299], + [0.81025249, 0.20303021, 0.68382382, 0.46372299, 0.81281709], + [0.81025249, 0.81025249, 0.81651256, 0.81281709, 0.81281709]]) + + res = medfilt2d(image=RANDOM_FLOAT_MAT, + kernel_size=kernel, + conditional=True, + mode='shrink') + + self.assertTrue(numpy.array_equal(res, thRes)) + + def testRandomInt(self): + """Test 3x3 kernel on RANDOM_INT_MAT + """ + kernel = (3, 3) + + thRes = numpy.array([[3, 2, 5, 2, 6], + [5, 3, 6, 6, 7], + [6, 6, 6, 6, 7], + [8, 8, 7, 7, 7]]) + + resK1 = medfilt2d(image=RANDOM_INT_MAT, + kernel_size=kernel, + conditional=False, + mode='shrink') + + self.assertTrue(numpy.array_equal(resK1, thRes)) + + +class TestGeneralExecution(ParametricTestCase): + """Some general test on median filter application""" + + def testTypes(self): + """Test that all needed types have their implementation of the median + filter + """ + for mode in silx_mf_modes: + for testType in [numpy.float32, numpy.float64, numpy.int16, + numpy.uint16, numpy.int32, numpy.int64, + numpy.uint64]: + with self.subTest(mode=mode, type=testType): + data = (numpy.random.rand(10, 10) * 65000).astype(testType) + out = medfilt2d(image=data, + kernel_size=(3, 3), + conditional=False, + mode=mode) + self.assertTrue(out.dtype.type is testType) + + def testInputDataIsNotModify(self): + """Make sure input data is not modify by the median filter""" + dataIn = numpy.arange(100, dtype=numpy.int32) + dataIn = dataIn.reshape((10, 10)) + dataInCopy = dataIn.copy() + + for mode in silx_mf_modes: + with self.subTest(mode=mode): + medfilt2d(image=dataIn, + kernel_size=(3, 3), + conditional=False, + mode=mode) + self.assertTrue(numpy.array_equal(dataIn, dataInCopy)) + + +def _getScipyAndSilxCommonModes(): + """return the mode which are comparable between silx and scipy""" + modes = silx_mf_modes.copy() + del modes['shrink'] + return modes + + +@unittest.skipUnless(scipy is not None, "scipy not available") +class TestVsScipy(ParametricTestCase): + """Compare scipy.ndimage.median_filter vs silx.math.medianfilter + on comparable + """ def testWithArange(self): + """Test vs scipy with different kernels on arange matrix""" data = numpy.arange(10000, dtype=numpy.int32) data = data.reshape(100, 100) kernels = [(3, 7), (7, 5), (1, 1), (3, 3)] + modesToTest = _getScipyAndSilxCommonModes() for kernel in kernels: - with self.subTest(kernel=kernel): - resScipy = scipy.ndimage.median_filter(input=data, - size=kernel, - mode='nearest') - resSilx = medfilt2d(image=data, - kernel_size=kernel, - conditional=False) - - self.assertTrue(numpy.array_equal(resScipy, resSilx)) + for mode in modesToTest: + with self.subTest(kernel=kernel, mode=mode): + resScipy = scipy.ndimage.median_filter(input=data, + size=kernel, + mode=mode) + resSilx = medfilt2d(image=data, + kernel_size=kernel, + conditional=False, + mode=mode) + + self.assertTrue(numpy.array_equal(resScipy, resSilx)) - @unittest.skipUnless(scipy, "scipy not available") def testRandomMatrice(self): + """Test vs scipy with different kernels on RANDOM_FLOAT_MAT""" kernels = [(3, 7), (7, 5), (1, 1), (3, 3)] + modesToTest = _getScipyAndSilxCommonModes() for kernel in kernels: - with self.subTest(kernel=kernel): - resScipy = scipy.ndimage.median_filter(input=self.random_mat, - size=kernel, - mode='nearest') + for mode in modesToTest: + with self.subTest(kernel=kernel, mode=mode): + resScipy = scipy.ndimage.median_filter(input=RANDOM_FLOAT_MAT, + size=kernel, + mode=mode) - resSilx = medfilt2d(image=self.random_mat, - kernel_size=kernel, - conditional=False) + resSilx = medfilt2d(image=RANDOM_FLOAT_MAT, + kernel_size=kernel, + conditional=False, + mode=mode) - self.assertTrue(numpy.array_equal(resScipy, resSilx)) + self.assertTrue(numpy.array_equal(resScipy, resSilx)) - @unittest.skipUnless(scipy, "scipy not available") def testAscentOrLena(self): + """Test vs scipy with """ if hasattr(scipy.misc, 'ascent'): img = scipy.misc.ascent() else: img = scipy.misc.lena() kernels = [(3, 1), (3, 5), (5, 9), (9, 3)] + modesToTest = _getScipyAndSilxCommonModes() + for kernel in kernels: - with self.subTest(kernel=kernel): - resScipy = scipy.ndimage.median_filter(input=img, - size=kernel, - mode='nearest') + for mode in modesToTest: + with self.subTest(kernel=kernel, mode=mode): + resScipy = scipy.ndimage.median_filter(input=img, + size=kernel, + mode=mode) - resSilx = medfilt2d(image=img, - kernel_size=kernel, - conditional=False) + resSilx = medfilt2d(image=img, + kernel_size=kernel, + conditional=False, + mode=mode) - self.assertTrue(numpy.array_equal(resScipy, resSilx)) + self.assertTrue(numpy.array_equal(resScipy, resSilx)) def suite(): test_suite = unittest.TestSuite() - for test in [TestMedianFilterNearest, ]: + for test in [TestGeneralExecution, TestVsScipy, + TestMedianFilterNearest, TestMedianFilterReflect, + TestMedianFilterMirror, TestMedianFilterShrink]: test_suite.addTest( unittest.defaultTestLoader.loadTestsFromTestCase(test)) return test_suite |