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Diffstat (limited to 'src/silx/gui/plot/actions/medfilt.py')
-rw-r--r-- | src/silx/gui/plot/actions/medfilt.py | 147 |
1 files changed, 147 insertions, 0 deletions
diff --git a/src/silx/gui/plot/actions/medfilt.py b/src/silx/gui/plot/actions/medfilt.py new file mode 100644 index 0000000..f86a377 --- /dev/null +++ b/src/silx/gui/plot/actions/medfilt.py @@ -0,0 +1,147 @@ +# coding: utf-8 +# /*########################################################################## +# +# Copyright (c) 2004-2020 European Synchrotron Radiation Facility +# +# Permission is hereby granted, free of charge, to any person obtaining a copy +# of this software and associated documentation files (the "Software"), to deal +# in the Software without restriction, including without limitation the rights +# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +# copies of the Software, and to permit persons to whom the Software is +# furnished to do so, subject to the following conditions: +# +# The above copyright notice and this permission notice shall be included in +# all copies or substantial portions of the Software. +# +# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN +# THE SOFTWARE. +# +# ###########################################################################*/ +""" +:mod:`silx.gui.plot.actions.medfilt` provides a set of QAction to apply filter +on data contained in a :class:`.PlotWidget`. + +The following QAction are available: + +- :class:`MedianFilterAction` +- :class:`MedianFilter1DAction` +- :class:`MedianFilter2DAction` + +""" + +from __future__ import division + +__authors__ = ["V.A. Sole", "T. Vincent", "P. Knobel"] +__license__ = "MIT" + +__date__ = "10/10/2018" + +from .PlotToolAction import PlotToolAction +from silx.gui.widgets.MedianFilterDialog import MedianFilterDialog +from silx.math.medianfilter import medfilt2d +import logging + +_logger = logging.getLogger(__name__) + + +class MedianFilterAction(PlotToolAction): + """QAction to plot the pixels intensities diagram + + :param plot: :class:`.PlotWidget` instance on which to operate + :param parent: See :class:`QAction` + """ + + def __init__(self, plot, parent=None): + PlotToolAction.__init__(self, + plot, + icon='median-filter', + text='median filter', + tooltip='Apply a median filter on the image', + parent=parent) + self._originalImage = None + self._legend = None + self._filteredImage = None + + def _createToolWindow(self): + popup = MedianFilterDialog(parent=self.plot) + popup.sigFilterOptChanged.connect(self._updateFilter) + return popup + + def _connectPlot(self, window): + PlotToolAction._connectPlot(self, window) + self.plot.sigActiveImageChanged.connect(self._updateActiveImage) + self._updateActiveImage() + + def _disconnectPlot(self, window): + PlotToolAction._disconnectPlot(self, window) + self.plot.sigActiveImageChanged.disconnect(self._updateActiveImage) + + def _updateActiveImage(self): + """Set _activeImageLegend and _originalImage from the active image""" + self._activeImageLegend = self.plot.getActiveImage(just_legend=True) + if self._activeImageLegend is None: + self._originalImage = None + self._legend = None + else: + self._originalImage = self.plot.getImage(self._activeImageLegend).getData(copy=False) + self._legend = self.plot.getImage(self._activeImageLegend).getName() + + def _updateFilter(self, kernelWidth, conditional=False): + if self._originalImage is None: + return + + self.plot.sigActiveImageChanged.disconnect(self._updateActiveImage) + filteredImage = self._computeFilteredImage(kernelWidth, conditional) + self.plot.addImage(data=filteredImage, + legend=self._legend, + replace=True) + self.plot.sigActiveImageChanged.connect(self._updateActiveImage) + + def _computeFilteredImage(self, kernelWidth, conditional): + raise NotImplementedError('MedianFilterAction is a an abstract class') + + def getFilteredImage(self): + """ + :return: the image with the median filter apply on""" + return self._filteredImage + + +class MedianFilter1DAction(MedianFilterAction): + """Define the MedianFilterAction for 1D + + :param plot: :class:`.PlotWidget` instance on which to operate + :param parent: See :class:`QAction` + """ + def __init__(self, plot, parent=None): + MedianFilterAction.__init__(self, + plot, + parent=parent) + + def _computeFilteredImage(self, kernelWidth, conditional): + assert(self.plot is not None) + return medfilt2d(self._originalImage, + (kernelWidth, 1), + conditional) + + +class MedianFilter2DAction(MedianFilterAction): + """Define the MedianFilterAction for 2D + + :param plot: :class:`.PlotWidget` instance on which to operate + :param parent: See :class:`QAction` + """ + def __init__(self, plot, parent=None): + MedianFilterAction.__init__(self, + plot, + parent=parent) + + def _computeFilteredImage(self, kernelWidth, conditional): + assert(self.plot is not None) + return medfilt2d(self._originalImage, + (kernelWidth, kernelWidth), + conditional) |