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+#!/usr/bin/env python
+# coding: utf-8
+# /*##########################################################################
+#
+# Copyright (c) 2016 European Synchrotron Radiation Facility
+#
+# Permission is hereby granted, free of charge, to any person obtaining a copy
+# of this software and associated documentation files (the "Software"), to deal
+# in the Software without restriction, including without limitation the rights
+# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+# copies of the Software, and to permit persons to whom the Software is
+# furnished to do so, subject to the following conditions:
+#
+# The above copyright notice and this permission notice shall be included in
+# all copies or substantial portions of the Software.
+#
+# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+# THE SOFTWARE.
+#
+# ###########################################################################*/
+"""Test of the forward projection module"""
+
+from __future__ import division, print_function
+
+__authors__ = ["Pierre paleo"]
+__license__ = "MIT"
+__copyright__ = "2013-2017 European Synchrotron Radiation Facility, Grenoble, France"
+__date__ = "19/01/2018"
+
+
+import time
+import logging
+import numpy as np
+import unittest
+try:
+ import mako
+except ImportError:
+ mako = None
+from ..common import ocl
+if ocl:
+ from .. import projection
+from silx.test.utils import utilstest
+
+logger = logging.getLogger(__name__)
+
+
+@unittest.skipUnless(ocl and mako, "PyOpenCl is missing")
+class TestProj(unittest.TestCase):
+
+ def setUp(self):
+ if ocl is None:
+ return
+ # ~ if sys.platform.startswith('darwin'):
+ # ~ self.skipTest("Projection is not implemented on CPU for OS X yet")
+ self.getfiles()
+ n_angles = self.sino.shape[0]
+ self.proj = projection.Projection(self.phantom.shape, n_angles)
+ if self.proj.compiletime_workgroup_size < 16 * 16:
+ self.skipTest("Current implementation of OpenCL projection is not supported on this platform yet")
+
+ def tearDown(self):
+ self.phantom = None
+ self.sino = None
+ self.proj = None
+
+ def getfiles(self):
+ # load 512x512 MRI phantom
+ self.phantom = np.load(utilstest.getfile("Brain512.npz"))["data"]
+ # load sinogram computed with PyHST
+ self.sino = np.load(utilstest.getfile("sino500_pyhst.npz"))["data"]
+
+ def measure(self):
+ "Common measurement of timings"
+ t1 = time.time()
+ try:
+ result = self.proj.projection(self.phantom)
+ except RuntimeError as msg:
+ logger.error(msg)
+ return
+ t2 = time.time()
+ return t2 - t1, result
+
+ def compare(self, res):
+ """
+ Compare a result with the reference reconstruction.
+ Only the valid reconstruction zone (inscribed circle) is taken into account
+ """
+ # Compare with the original phantom.
+ # TODO: compare a standard projection
+ ref = self.sino
+ return np.max(np.abs(res - ref))
+
+ @unittest.skipUnless(ocl and mako, "pyopencl is missing")
+ def test_proj(self):
+ """
+ tests Projection
+ """
+ # Test single reconstruction
+ # --------------------------
+ t, res = self.measure()
+ if t is None:
+ logger.info("test_proj: skipped")
+ else:
+ logger.info("test_proj: time = %.3fs" % t)
+ err = self.compare(res)
+ msg = str("Max error = %e" % err)
+ logger.info(msg)
+ # Interpolation differs at some lines, giving relative error of 10/50000
+ self.assertTrue(err < 20., "Max error is too high")
+ # Test multiple reconstructions
+ # -----------------------------
+ res0 = np.copy(res)
+ for i in range(10):
+ res = self.proj.projection(self.phantom)
+ errmax = np.max(np.abs(res - res0))
+ self.assertTrue(errmax < 1.e-6, "Max error is too high")