# coding: utf-8 # /*########################################################################## # # Copyright (c) 2004-2020 European Synchrotron Radiation Facility # # Permission is hereby granted, free of charge, to any person obtaining a copy # of this software and associated documentation files (the "Software"), to deal # in the Software without restriction, including without limitation the rights # to use, copy, modify, merge, publish, distribute, sublicense, and/or sell # copies of the Software, and to permit persons to whom the Software is # furnished to do so, subject to the following conditions: # # The above copyright notice and this permission notice shall be included in # all copies or substantial portions of the Software. # # THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR # IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, # FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE # AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER # LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN # THE SOFTWARE. # # ###########################################################################*/ """ :mod:`silx.gui.plot.actions.fit` module provides actions relative to fit. The following QAction are available: - :class:`.FitAction` .. autoclass:`.FitAction` """ from __future__ import division __authors__ = ["V.A. Sole", "T. Vincent", "P. Knobel"] __license__ = "MIT" __date__ = "10/10/2018" import logging import numpy from .PlotToolAction import PlotToolAction from .. import items from ....utils.deprecation import deprecated from silx.gui import qt from silx.gui.plot.ItemsSelectionDialog import ItemsSelectionDialog _logger = logging.getLogger(__name__) def _getUniqueCurveOrHistogram(plot): """Returns unique :class:`Curve` or :class:`Histogram` in a `PlotWidget`. If there is an active curve, returns it, else return curve or histogram only if alone in the plot. :param PlotWidget plot: :rtype: Union[None,~silx.gui.plot.items.Curve,~silx.gui.plot.items.Histogram] """ curve = plot.getActiveCurve() if curve is not None: return curve histograms = [item for item in plot.getItems() if isinstance(item, items.Histogram) and item.isVisible()] curves = [item for item in plot.getItems() if isinstance(item, items.Curve) and item.isVisible()] if len(histograms) == 1 and len(curves) == 0: return histograms[0] elif len(curves) == 1 and len(histograms) == 0: return curves[0] else: return None class FitAction(PlotToolAction): """QAction to open a :class:`FitWidget` and set its data to the active curve if any, or to the first curve. :param plot: :class:`.PlotWidget` instance on which to operate :param parent: See :class:`QAction` """ def __init__(self, plot, parent=None): self.__item = None self.__activeCurveSynchroEnabled = False self.__range = 0, 1 self.__rangeAutoUpdate = False self.__x, self.__y = None, None # Data to fit self.__curveParams = {} # Store curve parameters to use for fit result self.__legend = None super(FitAction, self).__init__( plot, icon='math-fit', text='Fit curve', tooltip='Open a fit dialog', parent=parent) @property @deprecated(replacement='getXRange()[0]', since_version='0.13.0') def xmin(self): return self.getXRange()[0] @property @deprecated(replacement='getXRange()[1]', since_version='0.13.0') def xmax(self): return self.getXRange()[1] @property @deprecated(replacement='getXData()', since_version='0.13.0') def x(self): return self.getXData() @property @deprecated(replacement='getYData()', since_version='0.13.0') def y(self): return self.getYData() @property @deprecated(since_version='0.13.0') def xlabel(self): return self.__curveParams.get('xlabel', None) @property @deprecated(since_version='0.13.0') def ylabel(self): return self.__curveParams.get('ylabel', None) @property @deprecated(since_version='0.13.0') def legend(self): return self.__legend def _createToolWindow(self): # import done here rather than at module level to avoid circular import # FitWidget -> BackgroundWidget -> PlotWindow -> actions -> fit -> FitWidget from ...fit.FitWidget import FitWidget window = FitWidget(parent=self.plot) window.setWindowFlags(qt.Qt.Dialog) window.sigFitWidgetSignal.connect(self.handle_signal) return window def _connectPlot(self, window): if self.isXRangeUpdatedOnZoom(): self.__setAutoXRangeEnabled(True) else: plot = self.plot if plot is None: _logger.error("No associated PlotWidget") return self._setXRange(*plot.getXAxis().getLimits()) if self.isFittedItemUpdatedFromActiveCurve(): self.__setFittedItemAutoUpdateEnabled(True) else: # Wait for the next iteration, else the plot is not yet initialized # No curve available qt.QTimer.singleShot(10, self._initFit) def _disconnectPlot(self, window): if self.isXRangeUpdatedOnZoom(): self.__setAutoXRangeEnabled(False) if self.isFittedItemUpdatedFromActiveCurve(): self.__setFittedItemAutoUpdateEnabled(False) def _initFit(self): plot = self.plot if plot is None: _logger.error("No associated PlotWidget") return item = _getUniqueCurveOrHistogram(plot) if item is None: # ambiguous case, we need to ask which plot item to fit isd = ItemsSelectionDialog(parent=plot, plot=plot) isd.setWindowTitle("Select item to be fitted") isd.setItemsSelectionMode(qt.QTableWidget.SingleSelection) isd.setAvailableKinds(["curve", "histogram"]) isd.selectAllKinds() if not isd.exec_(): # Cancel self._getToolWindow().setVisible(False) else: selectedItems = isd.getSelectedItems() item = selectedItems[0] if len(selectedItems) == 1 else None self._setXRange(*plot.getXAxis().getLimits()) self._setFittedItem(item) def __updateFitWidget(self): """Update the data/range used by the FitWidget""" fitWidget = self._getToolWindow() item = self._getFittedItem() xdata = self.getXData(copy=False) ydata = self.getYData(copy=False) if item is None or xdata is None or ydata is None: fitWidget.setData(y=None) fitWidget.setWindowTitle("No curve selected") else: xmin, xmax = self.getXRange() fitWidget.setData( xdata, ydata, xmin=xmin, xmax=xmax) fitWidget.setWindowTitle( "Fitting " + item.getName() + " on x range %f-%f" % (xmin, xmax)) # X Range management def getXRange(self): """Returns the range on the X axis on which to perform the fit.""" return self.__range def _setXRange(self, xmin, xmax): """Set the range on which the fit is done. :param float xmin: :param float xmax: """ range_ = float(xmin), float(xmax) if self.__range != range_: self.__range = range_ self.__updateFitWidget() def __setAutoXRangeEnabled(self, enabled): """Implement the change of update mode of the X range. :param bool enabled: """ plot = self.plot if plot is None: _logger.error("No associated PlotWidget") return if enabled: self._setXRange(*plot.getXAxis().getLimits()) plot.getXAxis().sigLimitsChanged.connect(self._setXRange) else: plot.getXAxis().sigLimitsChanged.disconnect(self._setXRange) def setXRangeUpdatedOnZoom(self, enabled): """Set whether or not to update the X range on zoom change. :param bool enabled: """ if enabled != self.__rangeAutoUpdate: self.__rangeAutoUpdate = enabled if self._getToolWindow().isVisible(): self.__setAutoXRangeEnabled(enabled) def isXRangeUpdatedOnZoom(self): """Returns the current mode of fitted data X range update. :rtype: bool """ return self.__rangeAutoUpdate # Fitted item update def getXData(self, copy=True): """Returns the X data used for the fit or None if undefined. :param bool copy: True to get a copy of the data, False to get the internal data. :rtype: Union[numpy.ndarray,None] """ return None if self.__x is None else numpy.array(self.__x, copy=copy) def getYData(self, copy=True): """Returns the Y data used for the fit or None if undefined. :param bool copy: True to get a copy of the data, False to get the internal data. :rtype: Union[numpy.ndarray,None] """ return None if self.__y is None else numpy.array(self.__y, copy=copy) def _getFittedItem(self): """Returns the current item used for the fit :rtype: Union[~silx.gui.plot.items.Curve,~silx.gui.plot.items.Histogram,None] """ return self.__item def _setFittedItem(self, item): """Set the curve to use for fitting. :param Union[~silx.gui.plot.items.Curve,~silx.gui.plot.items.Histogram,None] item: """ plot = self.plot if plot is None: _logger.error("No associated PlotWidget") if plot is None or item is None: self.__item = None self.__curveParams = {} self.__updateFitWidget() return axis = item.getYAxis() if isinstance(item, items.YAxisMixIn) else 'left' self.__curveParams = { 'yaxis': axis, 'xlabel': plot.getXAxis().getLabel(), 'ylabel': plot.getYAxis(axis).getLabel(), } self.__legend = item.getName() if isinstance(item, items.Histogram): bin_edges = item.getBinEdgesData(copy=False) # take the middle coordinate between adjacent bin edges self.__x = (bin_edges[1:] + bin_edges[:-1]) / 2 self.__y = item.getValueData(copy=False) # else take the active curve, or else the unique curve elif isinstance(item, items.Curve): self.__x = item.getXData(copy=False) self.__y = item.getYData(copy=False) self.__item = item self.__updateFitWidget() def __activeCurveChanged(self, previous, current): """Handle change of active curve in the PlotWidget """ if current is None: self._setFittedItem(None) else: item = self.plot.getCurve(current) self._setFittedItem(item) def __setFittedItemAutoUpdateEnabled(self, enabled): """Implement the change of fitted item update mode :param bool enabled: """ plot = self.plot if plot is None: _logger.error("No associated PlotWidget") return if enabled: self._setFittedItem(plot.getActiveCurve()) plot.sigActiveCurveChanged.connect(self.__activeCurveChanged) else: plot.sigActiveCurveChanged.disconnect( self.__activeCurveChanged) def setFittedItemUpdatedFromActiveCurve(self, enabled): """Toggle fitted data synchronization with plot active curve. :param bool enabled: """ enabled = bool(enabled) if enabled != self.__activeCurveSynchroEnabled: self.__activeCurveSynchroEnabled = enabled if self._getToolWindow().isVisible(): self.__setFittedItemAutoUpdateEnabled(enabled) def isFittedItemUpdatedFromActiveCurve(self): """Returns True if fitted data is synchronized with plot. :rtype: bool """ return self.__activeCurveSynchroEnabled # Handle fit completed def handle_signal(self, ddict): xdata = self.getXData(copy=False) if xdata is None: _logger.error("No reference data to display fit result for") return xmin, xmax = self.getXRange() x_fit = xdata[xmin <= xdata] x_fit = x_fit[x_fit <= xmax] fit_legend = "Fit <%s>" % self.__legend fit_curve = self.plot.getCurve(fit_legend) if ddict["event"] == "FitFinished": fit_widget = self._getToolWindow() if fit_widget is None: return y_fit = fit_widget.fitmanager.gendata() if fit_curve is None: self.plot.addCurve(x_fit, y_fit, fit_legend, resetzoom=False, **self.__curveParams) else: fit_curve.setData(x_fit, y_fit) fit_curve.setVisible(True) fit_curve.setYAxis(self.__curveParams.get('yaxis', 'left')) if ddict["event"] in ["FitStarted", "FitFailed"]: if fit_curve is not None: fit_curve.setVisible(False)