# coding: utf-8 # /*########################################################################## # # Copyright (c) 2004-2018 European Synchrotron Radiation Facility # # Permission is hereby granted, free of charge, to any person obtaining a copy # of this software and associated documentation files (the "Software"), to deal # in the Software without restriction, including without limitation the rights # to use, copy, modify, merge, publish, distribute, sublicense, and/or sell # copies of the Software, and to permit persons to whom the Software is # furnished to do so, subject to the following conditions: # # The above copyright notice and this permission notice shall be included in # all copies or substantial portions of the Software. # # THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR # IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, # FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE # AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER # LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN # THE SOFTWARE. # # ###########################################################################*/ """ :mod:`silx.gui.plot.actions.medfilt` provides a set of QAction to apply filter on data contained in a :class:`.PlotWidget`. The following QAction are available: - :class:`MedianFilterAction` - :class:`MedianFilter1DAction` - :class:`MedianFilter2DAction` """ from __future__ import division __authors__ = ["V.A. Sole", "T. Vincent", "P. Knobel"] __license__ = "MIT" __date__ = "10/10/2018" from .PlotToolAction import PlotToolAction from silx.gui.widgets.MedianFilterDialog import MedianFilterDialog from silx.math.medianfilter import medfilt2d import logging _logger = logging.getLogger(__name__) class MedianFilterAction(PlotToolAction): """QAction to plot the pixels intensities diagram :param plot: :class:`.PlotWidget` instance on which to operate :param parent: See :class:`QAction` """ def __init__(self, plot, parent=None): PlotToolAction.__init__(self, plot, icon='median-filter', text='median filter', tooltip='Apply a median filter on the image', parent=parent) self._originalImage = None self._legend = None self._filteredImage = None def _createToolWindow(self): popup = MedianFilterDialog(parent=self.plot) popup.sigFilterOptChanged.connect(self._updateFilter) return popup def _connectPlot(self, window): PlotToolAction._connectPlot(self, window) self.plot.sigActiveImageChanged.connect(self._updateActiveImage) self._updateActiveImage() def _disconnectPlot(self, window): PlotToolAction._disconnectPlot(self, window) self.plot.sigActiveImageChanged.disconnect(self._updateActiveImage) def _updateActiveImage(self): """Set _activeImageLegend and _originalImage from the active image""" self._activeImageLegend = self.plot.getActiveImage(just_legend=True) if self._activeImageLegend is None: self._originalImage = None self._legend = None else: self._originalImage = self.plot.getImage(self._activeImageLegend).getData(copy=False) self._legend = self.plot.getImage(self._activeImageLegend).getLegend() def _updateFilter(self, kernelWidth, conditional=False): if self._originalImage is None: return self.plot.sigActiveImageChanged.disconnect(self._updateActiveImage) filteredImage = self._computeFilteredImage(kernelWidth, conditional) self.plot.addImage(data=filteredImage, legend=self._legend, replace=True) self.plot.sigActiveImageChanged.connect(self._updateActiveImage) def _computeFilteredImage(self, kernelWidth, conditional): raise NotImplementedError('MedianFilterAction is a an abstract class') def getFilteredImage(self): """ :return: the image with the median filter apply on""" return self._filteredImage class MedianFilter1DAction(MedianFilterAction): """Define the MedianFilterAction for 1D :param plot: :class:`.PlotWidget` instance on which to operate :param parent: See :class:`QAction` """ def __init__(self, plot, parent=None): MedianFilterAction.__init__(self, plot, parent=parent) def _computeFilteredImage(self, kernelWidth, conditional): assert(self.plot is not None) return medfilt2d(self._originalImage, (kernelWidth, 1), conditional) class MedianFilter2DAction(MedianFilterAction): """Define the MedianFilterAction for 2D :param plot: :class:`.PlotWidget` instance on which to operate :param parent: See :class:`QAction` """ def __init__(self, plot, parent=None): MedianFilterAction.__init__(self, plot, parent=parent) def _computeFilteredImage(self, kernelWidth, conditional): assert(self.plot is not None) return medfilt2d(self._originalImage, (kernelWidth, kernelWidth), conditional)