# coding: utf-8
#/*##########################################################################
# Copyright (C) 2016 European Synchrotron Radiation Facility
#
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# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
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# copies of the Software, and to permit persons to whom the Software is
# furnished to do so, subject to the following conditions:
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# The above copyright notice and this permission notice shall be included in
# all copies or substantial portions of the Software.
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# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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__authors__ = ["P. Knobel"]
__license__ = "MIT"
__date__ = "14/06/2016"

cimport cython

cdef extern from "functions.h":
    int erfc_array(double* x,
                   int len_x,
                   double* y)

    int erf_array(double* x,
                  int len_x,
                  double* y);

    void snip1d(double *data,
                int size,
                int width)

    void snip2d(double *data,
                int nrows,
                int ncolumns,
                int width)

    void snip3d(double *data,
                int nx,
                int ny,
                int nz,
                int width)

    int strip(double* input,
              long len_input,
              double c,
              long niter,
              int deltai,
              long* anchors,
              long len_anchors,
              double* output)

    int  sum_gauss(double* x,
                   int len_x,
                   double* pgauss,
                   int len_pgauss,
                   double* y)

    int  sum_agauss(double* x,
                    int len_x,
                    double* pgauss,
                    int len_pgauss,
                    double* y)

    int  sum_fastagauss(double* x,
                        int len_x,
                        double* pgauss,
                        int len_pgauss,
                        double* y)

    int  sum_splitgauss(double* x,
                        int len_x,
                        double* pgauss,
                        int len_pgauss,
                        double* y)

    int  sum_apvoigt(double* x,
                     int len_x,
                     double* pvoigt,
                     int len_pvoigt,
                     double* y)

    int  sum_pvoigt(double* x,
                    int len_x,
                    double* pvoigt,
                    int len_pvoigt,
                    double* y)

    int  sum_splitpvoigt(double* x,
                         int len_x,
                         double* pvoigt,
                         int len_pvoigt,
                         double* y)

    int  sum_lorentz(double* x,
                     int len_x,
                     double* plorentz,
                     int len_plorentz,
                     double* y)

    int  sum_alorentz(double* x,
                     int len_x,
                     double* plorentz,
                     int len_plorentz,
                     double* y)

    int  sum_splitlorentz(double* x,
                         int len_x,
                         double* plorentz,
                         int len_plorentz,
                         double* y)

    int sum_stepdown(double* x,
                     int len_x,
                     double* pdstep,
                     int len_pdstep,
                     double* y)

    int sum_stepup(double* x,
                   int len_x,
                   double* pustep,
                   int len_pustep,
                   double* y)

    int sum_slit(double* x,
                 int len_x,
                 double* pslit,
                 int len_pslit,
                 double* y)

    int sum_ahypermet(double* x,
                      int len_x,
                      double* phypermet,
                      int len_phypermet,
                      double* y,
                      int tail_flags)

    int sum_fastahypermet(double* x,
                          int len_x,
                          double* phypermet,
                          int len_phypermet,
                          double* y,
                          int tail_flags)

    long seek(long begin_index,
              long end_index,
              long nsamples,
              double  fwhm,
              double sensitivity,
              double debug_info,
              long max_npeaks,
              double * data,
              double * peaks,
              double * relevances)

    int SavitskyGolay(double* input,
                      long len_input,
                      int npoints,
                      double* output)