Restore all changes removed for the urgent upload in frozen state

5 files changed, 73 insertions, 12 deletions

diff --git a/debian/README.test b/debian/README.test
new file mode 100644
index 0000000..805a6f7
--- /dev/null
+++ b/debian/README.test
@@ -0,0 +1,10 @@
+Notes on how this package can be tested.
+────────────────────────────────────────
+
+This package can be tested by running the provided test:
+
+    sh run-unit-test
+
+in order to confirm its integrity.
+
+
diff --git a/debian/changelog b/debian/changelog
index 40dcf29..3df76a9 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,19 @@
+mirtop (0.4.23-3) UNRELEASED; urgency=medium
+
+  * Team Upload.
+
+  [ Matúš Kalaš ]
+  * Update citations
+  * Fixed citations
+  * Added biotoolsID
+  * Pretty-printed metadata & removed double-quotes
+
+  [ Shruti Sridhar ]
+  * Add autopkgtests
+  * Add salsa-ci.yml
+
+ -- Nilesh Patra <nilesh@debian.org>  Wed, 30 Jun 2021 18:18:19 +0000
+
 mirtop (0.4.23-2) unstable; urgency=medium
 
   * Team Upload.
diff --git a/debian/docs b/debian/docs
new file mode 100644
index 0000000..c231a64
--- /dev/null
+++ b/debian/docs
@@ -0,0 +1,3 @@
+README.md
+debian/README*
+debian/tests/run-unit-test
diff --git a/debian/salsa-ci.yml b/debian/salsa-ci.yml
new file mode 100644
index 0000000..33c3a64
--- /dev/null
+++ b/debian/salsa-ci.yml
@@ -0,0 +1,4 @@
+---
+include:
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml
diff --git a/debian/upstream/metadata b/debian/upstream/metadata
index 9942f4e..f1842e0 100644
--- a/debian/upstream/metadata
+++ b/debian/upstream/metadata
@@ -1,15 +1,43 @@
 Reference:
-- Author: Lorena Patano
-  Title: project for small RNA standard annotations
-  Year: 2016
-  Month: 2
-  DOI: 10.5281/zenodo.45385
+  - Author: >
+      Thomas Desvignes and Karen Eilbeck and Ioannis S. Vlachos and Bastian Fromm
+      and Yin Lu and Marc K. Halushka and Michael Hackenberg and Gianvito Urgese
+      and Elisa Ficarra and Shruthi Bandyadka and Jason Sydes and Peter Batzel
+      and John H. Postlethwait and Phillipe Loher and Eric Londin
+      and Aristeidis G. Telonis and Isidore Rigoutsos and Lorena Pantano Rubino
+    Title: >
+      miRTOP: An open source community project for the development
+      of a unified format file for miRNA data [version 1; not peer reviewed]
+    Year: 2018
+    Journal: F1000Research
+    Volume: 7
+    Number: ISCB Comm. J.
+    Pages: 953 (Slides)
+    DOI: 10.7490/f1000research.1115724.1
+    eprint: https://f1000research.com/slides/7-953#
+  - Author: >
+      Thomas Desvignes and Phillipe Loher and Karen Eilbeck and Jeffery Ma
+      and Gianvito Urgese and Bastian Fromm and Jason Sydes
+      and Ernesto Aparicio-Puerta and Victor Barrera and Roderic Espín
+      and Florian Thibord and Xavier Bofill-De Ros and Eric Londin
+      and Aristeidis G Telonis and Elisa Ficarra and Marc R Friedländer
+      and John H Postlethwait and Isidore Rigoutsos and Michael Hackenberg
+      and Ioannis S Vlachos and Marc K Halushka and Lorena Pantano 
+    Title: >
+      Unification of miRNA and isomiR research: the mirGFF3 format
+      and the mirtop API
+    Year: 2019
+    Journal: Bioinformatics
+    Month: 8
+    Pages: btz675
+    DOI: 10.1093/bioinformatics/btz675
+    PMID: 31504201
 Registry:
-- Name: OMICtools
-  Entry: OMICS_31718
-- Name: bio.tools
-  Entry: NA
-- Name: conda:bioconda
-  Entry: mirtop
+  - Name: OMICtools
+    Entry: OMICS_31718
+  - Name: bio.tools
+    Entry: mirtop
+  - Name: conda:bioconda
+    Entry: mirtop
 Repository: https://github.com/miRTop/mirtop
-Repository-Browse: https://github.com/miRTop/mirtop
+Repository-Browse: https://github.com/miRTop/mirtop
\ No newline at end of file