diff options
Diffstat (limited to 'test/concat.2.vcf.out')
| -rw-r--r-- | test/concat.2.vcf.out | 32 |
1 files changed, 32 insertions, 0 deletions
diff --git a/test/concat.2.vcf.out b/test/concat.2.vcf.out new file mode 100644 index 0000000..33600d1 --- /dev/null +++ b/test/concat.2.vcf.out @@ -0,0 +1,32 @@ +##fileformat=VCFv4.0 +##FILTER=<ID=PASS,Description="All filters passed"> +##INFO=<ID=XX,Number=1,Type=Integer,Description="Test"> +##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth"> +##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality"> +##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth"> +##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> +##FILTER=<ID=Fail,Description="Fail"> +##contig=<ID=1,length=62435964> +##contig=<ID=2,length=62435964> +##FILTER=<ID=q10,Description="Quality below 10"> +#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A +2 100 . GTTT G 1806 q10 DP=35 GT:GQ:DP 0/1:409:35 +2 110 . CAAA C 1792 PASS DP=32 GT:GQ:DP 0/1:245:32 +2 120 . GA G 628 q10 DP=21 GT:GQ:DP 1/1:21:21 +2 130 . GAA G 1016 PASS DP=22 GT:GQ:DP 0/1:212:22 +2 140 . A G 727 PASS DP=30 GT:GQ:DP 0/1:150:30 +2 140 . GT G 727 PASS DP=30 GT:GQ:DP 0/1:150:30 +2 150 . TAAAA TA,T 246 PASS DP=10 GT:GQ:DP 1/2:12:10 +2 160 . TAAAA TA,TC,T 246 PASS DP=10 GT:GQ:DP 0/2:12:10 +2 160 . TAAAA TA,TC,T 246 PASS DP=10 GT:GQ:DP 0/2:12:10 +1 100 . GTTT G 1806 q10 DP=35 GT:GQ:DP 0/1:409:35 +1 110 . C T,G 1792 Fail XX=11;DP=32 GT:GQ:DP 0/1:245:32 +1 110 . CAAA C 1792 PASS DP=32 GT:GQ:DP 0/1:245:32 +1 120 . GA G 628 q10 DP=21 GT:GQ:DP 1/1:21:21 +1 130 . GAA GG 1016 PASS DP=22 GT:GQ:DP 0/1:212:22 +1 130 . GAA GG 1016 PASS DP=22 GT:GQ:DP 0/1:212:22 +1 130 . G T 1016 PASS DP=22 GT:GQ:DP 0/1:212:22 +1 130 . G T 1016 PASS DP=22 GT:GQ:DP 0/1:212:22 +1 140 . GT G 727 PASS DP=30 GT:GQ:DP 0/1:150:30 +1 150 . TAAAA TA,T 246 PASS DP=10 GT:GQ:DP 1/2:12:10 +1 160 . TAAAA TA,T 246 PASS DP=10 GT:GQ:DP 1/2:12:10 |