bowtie2 - Debian dgit repo for package bowtie2

	Commit message (Collapse)	Author	Age
*	Math::Random is in package libmath-random-perl which is	Andreas Tille	2022-11-05
\| \| \| \| \| \| \| \| \|	Last-Update: Mon, 09 Jan 2017 11:13:13 +0100 unfortunately in non-free thus we can not use it for testing while building this package. Thus the occurrences of references and the surrounding code is removed here. Gbp-Pq: Name skip_test_requiring_non-free_libmath-random-perl.patch
*	make build reproducible	Sascha Steinbiss	2022-11-05
\| \| \| \| \| \| \|	This patch removes the embedding of build specific values like hostname, time, etc. from the binary. It also ensures a stable sorting order for all wildcard expansions in the Makefile. Gbp-Pq: Name reproducible.patch
*	Patch injects hardening C(PP,XX) FLAGS and LDFLAGS	Alexandre Mestiashvili	2022-11-05
\| \| \| \| \| \| \|	Origin: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> Last-Update: Tue, 2 Jan 2018 16:20:02 +0100 Gbp-Pq: Name hardening.patch
*	Use path to interpreter instead of /usr/bin/env	Alex Mestiashvili	2022-11-05
\| \| \| \| \| \|	Forwarded: not-needed Gbp-Pq: Name wrong-interpreter-path.patch
*	Remove link to external js lib, not needed as used for ie browsers	Alex Mestiashvili	2022-11-05
\| \| \| \| \| \|	Forwarded: not-needed Gbp-Pq: Name drop-not-needed-js-from-manual.patch
*	ready to upload to unstable.debian/2.5.0-1	Étienne Mollier	2022-11-05
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*	d/s/lintian-overrides: override missing source on doc/manual.html.	Étienne Mollier	2022-11-05
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*	d/rules: trigger refresh of the doc/manual.html.	Étienne Mollier	2022-11-05
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*	d/control: add pandoc to build doc/manual.html.	Étienne Mollier	2022-11-05
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*	update changelog.	Étienne Mollier	2022-11-05
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*	simde patch: adjust to introduction of AVX2 support.	Étienne Mollier	2022-11-05
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*	Update patches	Andreas Tille	2022-11-04
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*	Set upstream metadata fields: Bug-Database.	Andreas Tille	2022-11-04
\| \| \| \|	Changes-By: lintian-brush
*	Use secure URI in Homepage field.	Andreas Tille	2022-11-04
\| \| \| \| \| \|	Changes-By: lintian-brush Fixes: lintian: homepage-field-uses-insecure-uri See-also: https://lintian.debian.org/tags/homepage-field-uses-insecure-uri.html
*	routine-update: Standards-Version: 4.6.1	Andreas Tille	2022-11-04
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*	Update upstream source from tag 'upstream/2.5.0'	Andreas Tille	2022-11-04
\|\ \| \| \| \| \| \|	Update to upstream version '2.5.0' with Debian dir d43192418f3164832e48405c9da89906f697677b
\| *	New upstream version 2.5.0	Andreas Tille	2022-11-04
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* \|	routine-update: New upstream version	Andreas Tille	2022-11-04
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* \|	Use proper download file name	Andreas Tille	2022-02-17
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* \|	No salsa-ci for i386	Andreas Tille	2022-02-17
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* \|	Upload to unstable	Andreas Tille	2022-02-17
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* \|	Update patches	Andreas Tille	2022-02-17
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* \|	Drop transition for old debug package migration.	Andreas Tille	2022-02-17
\| \| \| \| \| \| \| \|	Changes-By: lintian-brush
* \|	Update upstream source from tag 'upstream/2.4.5'	Andreas Tille	2022-02-17
\|\\| \| \| \| \| \| \|	Update to upstream version '2.4.5' with Debian dir b558c595fb4d1a9d3fe70e3ae0aa5b3a3eede81c
\| *	New upstream version 2.4.5	Andreas Tille	2022-02-17
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* \|	routine-update: New upstream version	Andreas Tille	2022-02-17
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* \|	routine-update: Ready to upload to unstable	Michael R. Crusoe	2021-09-13
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* \|	no more tinythread, it seems	Michael R. Crusoe	2021-09-13
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* \|	Refresh patches	Michael R. Crusoe	2021-09-13
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* \|	routine-update: Standards-Version: 4.6.0	Michael R. Crusoe	2021-09-13
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* \|	Update upstream source from tag 'upstream/2.4.4'	Michael R. Crusoe	2021-09-13
\|\\| \| \| \| \| \| \|	Update to upstream version '2.4.4' with Debian dir 1f0c94300dbd49df3da4e08187c0ed18a34a6693
\| *	New upstream version 2.4.4	Michael R. Crusoe	2021-09-13
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* \|	routine-update: New upstream version	Michael R. Crusoe	2021-09-13
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* \|	routine-update: Fix watchfile to detect new versions on github	Michael R. Crusoe	2021-09-13
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* \|	prep for update	Michael R. Crusoe	2021-09-13
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* \|	Update metadata - indent plus ref to guix	Steffen Möller	2021-03-06
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* \|	Upload to unstable	Andreas Tille	2020-12-15
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* \|	use binaries installed to debian/tmp	Andreas Tille	2020-12-15
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* \|	routine-update: debhelper-compat 13	Andreas Tille	2020-12-15
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* \|	routine-update: Standards-Version: 4.5.1	Andreas Tille	2020-12-15
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* \|	Force same hostname to enable reproducible builds	Andreas Tille	2020-12-15
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* \|	Patch Makefile to set date for BUILD_TIME using SOURCE_DATE_EPOCH.	Andreas Tille	2020-12-15
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* \|	Update changelog	Alexandre Mestiashvili	2020-10-07
\| \| \| \| \| \| \| \|	Gbp-Dch: Ignore
* \|	Update changelog	Alexandre Mestiashvili	2020-10-07
\| \| \| \| \| \| \| \|	Gbp-Dch: Ignore
* \|	Apply cme fix dpkg, drop version from libsimde-dev	Alexandre Mestiashvili	2020-10-07
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* \|	refresh patches, drop applied by upstream gcc10_ftbfs_invalid_dquote_char.patch	Alexandre Mestiashvili	2020-10-07
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* \|	Update upstream source from tag 'upstream/2.4.2'	Alexandre Mestiashvili	2020-10-07
\|\\| \| \| \| \| \| \|	Update to upstream version '2.4.2' with Debian dir 713d84a42faf0a971ce12ffc958c650b0aca5832
\| *	New upstream version 2.4.2	Alexandre Mestiashvili	2020-10-07
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* \|	Bump version requirement for libsimde-dev to grab ppc64el fixes	Michael R. Crusoe	2020-06-01
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* \|	Upload to unstable	Andreas Tille	2020-05-25
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